BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046312
(514 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255582129|ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinus communis]
gi|223528509|gb|EEF30537.1| Cell division protein ftsH, putative [Ricinus communis]
Length = 1157
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/483 (64%), Positives = 381/483 (78%), Gaps = 2/483 (0%)
Query: 31 CLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
CLS LKLC S KHLYQIH+QIQVSGLQ D ++ +L++F +LS SK+L+YA+SIL + V+
Sbjct: 667 CLSLLKLCSSIKHLYQIHSQIQVSGLQGDTFLVTQLIKFSSLSPSKDLSYAQSILDHSVH 726
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
VP+PWN LIRGYA S+ P++A++V+ +M+ GI+P T+PF+LKACA EG Q
Sbjct: 727 -PVPLPWNILIRGYADSNTPKDALFVYRNMRNEGIRPNSLTFPFLLKACAACFATKEGKQ 785
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
V V K GLD DVY NNNLV FYGSC++ DACKVFD+M ER+VVSWN +IT CVE+L
Sbjct: 786 VHVEVIKYGLDCDVYVNNNLVNFYGSCKKILDACKVFDEMPERTVVSWNAVITSCVESLK 845
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
LGEA+ YF+KM+D GFEPD TTM+++L C E+GNL LG+W+H Q+IERG VLN QLGTA
Sbjct: 846 LGEAIRYFLKMRDFGFEPDGTTMVLMLVICAEMGNLGLGRWIHSQVIERGLVLNYQLGTA 905
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS-ISP 329
L+DMYAK GAVG A+L+F RM+E NVWTWSAMILGLAQHG+A+E LELF +M SS I P
Sbjct: 906 LVDMYAKSGAVGYAKLVFDRMKEKNVWTWSAMILGLAQHGFAKEGLELFLDMMRSSLIHP 965
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
NYVTFLGVLCAC+HAG+V DG+RYFHEM H +GIKPM +HY M DIL RAG LKEAY F
Sbjct: 966 NYVTFLGVLCACSHAGLVSDGFRYFHEMGHTYGIKPMMVHYGAMVDILGRAGLLKEAYNF 1025
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
I MPFQP+PIV R LLSA SIHD K GV +VR+RLLELEPR S N V+VAN YA+
Sbjct: 1026 ITKMPFQPDPIVWRTLLSACSIHDVKDSTGVAYKVRKRLLELEPRRSGNFVMVANMYADA 1085
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
GMWEK + VRR M++ GLKK G S VEL GSIHRF+SGYDSQ + G+YQ+L+ LNLHM
Sbjct: 1086 GMWEKAAKVRRVMRDGGLKKKAGESCVELSGSIHRFFSGYDSQDDKEGMYQLLDGLNLHM 1145
Query: 510 KVL 512
+++
Sbjct: 1146 QMM 1148
>gi|147852347|emb|CAN80116.1| hypothetical protein VITISV_032528 [Vitis vinifera]
Length = 505
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/513 (59%), Positives = 384/513 (74%), Gaps = 10/513 (1%)
Query: 1 MVRFPVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDA 60
MVR + T NH PPKPSN N +L+S +QCLS L LC S KHL+QI ++G
Sbjct: 1 MVRLQILTANHFCPPKPSNGNLNLVSTKQQCLSLLNLCSSMKHLFQIRGHGFIAG----- 55
Query: 61 QILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDM 120
L+RFC S NL +AR +L V WN+LIR YA D PREA+ +++M
Sbjct: 56 ----PLLRFCASSPLGNLNHARVLLSGSEKSEVS-SWNDLIRSYATRDSPREAIGAYLEM 110
Query: 121 KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRK 180
+ GI P + T+P +LKACA IS NEG ++Q +V K GLD +VY N ++ FYGSC+R
Sbjct: 111 RSLGISPDKLTFPILLKACAXISAFNEGRKIQVDVMKHGLDCNVYVQNTMIHFYGSCKRI 170
Query: 181 RDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
RDA ++FD+M R+VVSWN +++ CV+N WL ++ G FVKM+ GF+PDETTM+++LSAC
Sbjct: 171 RDARRMFDEMSYRTVVSWNAVLSACVDNEWLNDSFGLFVKMRGSGFDPDETTMVILLSAC 230
Query: 241 TELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
+ELGNLS G+WVH Q+IE+G V+NC+LGTAL+DMYAKCGAV A L+F RM E NVWTWS
Sbjct: 231 SELGNLSFGRWVHSQVIEKGMVVNCRLGTALVDMYAKCGAVCEASLVFHRMLERNVWTWS 290
Query: 301 AMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHV 360
AMILGLAQHG+A+EALELF MK SSISPNYVTFLGVLCAC+HAG+V+DGYR+FH+ME+V
Sbjct: 291 AMILGLAQHGFAKEALELFPKMKQSSISPNYVTFLGVLCACSHAGLVDDGYRFFHDMEYV 350
Query: 361 HGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGV 420
HGI+PM IHY M DIL+RAG LKEAY FI+NMP + +P+V R LLSA +IH DGV
Sbjct: 351 HGIEPMMIHYGAMVDILSRAGRLKEAYNFILNMPVEADPVVWRTLLSACTIHGINDNDGV 410
Query: 421 GNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGG 480
G++VR+RLLELEPR S N V+VAN YAEVG W+K +NVRR MK+ GLKKM G S +E+GG
Sbjct: 411 GDKVRKRLLELEPRRSGNFVMVANMYAEVGKWDKAANVRRTMKDTGLKKMAGESCIEVGG 470
Query: 481 SIHRFYSGYDSQVELAGIYQILETLNLHMKVLN 513
SIHRF+SG D Q++ + Q+L+ LNLHMK ++
Sbjct: 471 SIHRFFSGDDPQLDCEDVLQLLDGLNLHMKTVS 503
>gi|224141397|ref|XP_002324059.1| predicted protein [Populus trichocarpa]
gi|222867061|gb|EEF04192.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust.
Identities = 317/514 (61%), Positives = 395/514 (76%), Gaps = 12/514 (2%)
Query: 1 MVRFPVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDA 60
MVR PVP T N NS LLSK CLS LKL S KH+ QIHAQI VSGLQ D
Sbjct: 1 MVRLPVPRT--------VNSNSKLLSKKNHCLSLLKLSSSVKHVSQIHAQILVSGLQQDT 52
Query: 61 QILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDM 120
+L EL+RFC+LS SK+L+YA S+L N + DS+P PWN LIRGYA D P+ A+ VF M
Sbjct: 53 NLLTELIRFCSLSPSKHLSYAHSLLYNSL-DSLP-PWNFLIRGYASGDAPKNAIRVFHRM 110
Query: 121 KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRK 180
++ G+ P FT+PFVLKACA L EG QV A++ K GLD DVY NNNLV YGSC+R
Sbjct: 111 RKEGVGPNNFTFPFVLKACATCLALEEGKQVHADIFKFGLDCDVYVNNNLVHLYGSCKRI 170
Query: 181 RDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
DACKVFD+M RS+VSWN +IT CV+NLWLG+A+ FVKMKD GFEP+ETTM+++LS C
Sbjct: 171 WDACKVFDEMPVRSIVSWNSVITACVQNLWLGDAIWNFVKMKDFGFEPNETTMVIMLSLC 230
Query: 241 TELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
++GNLSLG+W+H Q+IERG LNCQLGTAL+DMYAK G +G A+L+F RME+ NVWTWS
Sbjct: 231 AQIGNLSLGRWIHSQVIERGMTLNCQLGTALVDMYAKSGDLGYAKLVFDRMEKKNVWTWS 290
Query: 301 AMILGLAQHGYAEEALELFSNMKNS-SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
AMILGLAQHG+ +E LELF MK S SI PNYVTFLGVLCAC+HAG+V++G+RYF+EMEH
Sbjct: 291 AMILGLAQHGFGKEGLELFLKMKESVSICPNYVTFLGVLCACSHAGLVDEGFRYFYEMEH 350
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
HGI+PM IHY M DIL RAG+L+EAY F+M++PFQP+PI+ R LLSA +IH+A DG
Sbjct: 351 RHGIRPMVIHYGAMVDILGRAGNLEEAYNFLMDVPFQPDPILWRTLLSACNIHNANVSDG 410
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
+ ++VR++LLELEPR S+N VI+AN YA+ GMWE +NVRR M++ GLKK+ G S + L
Sbjct: 411 LVDKVRKKLLELEPRRSENFVIIANMYADAGMWETATNVRRTMRDGGLKKIGGESCIVLE 470
Query: 480 GSIHRFYSGYDSQVELAGIYQILETLNLHMKVLN 513
GSIH+F+SG S+ + I +L+ LNL+MK++N
Sbjct: 471 GSIHQFFSGC-SKDDHESIELLLDGLNLNMKMVN 503
>gi|359488917|ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6,
chloroplastic-like [Vitis vinifera]
Length = 1146
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 291/497 (58%), Positives = 374/497 (75%), Gaps = 11/497 (2%)
Query: 18 SNCNSDLLS-KARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSK 76
++ +SD ++ K +QCLS L LC S KHL+QI ++G L+RFC S
Sbjct: 658 TDISSDKMNVKPQQCLSLLNLCSSMKHLFQIRGHGFIAG---------PLLRFCASSPLG 708
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
NL +AR +L V WN+LIR YA D PREA+ +++M+ GI P + T+P +L
Sbjct: 709 NLNHARVLLSGSEKSEVS-SWNDLIRSYATRDSPREAIGAYLEMRSLGISPDKLTFPILL 767
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
KACA IS NEG ++Q +V K GLD +VY N ++ FYGSC+R RDA ++FD+M R+VV
Sbjct: 768 KACAAISAFNEGRKIQVDVMKHGLDCNVYVQNTMIHFYGSCKRIRDARRMFDEMSYRTVV 827
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
SWN +++ CV+N WL ++ G FVKM+ GF+PDETTM+++LSAC+ELGNLS G+WVH Q+
Sbjct: 828 SWNAVLSACVDNEWLNDSFGLFVKMRGSGFDPDETTMVILLSACSELGNLSFGRWVHSQV 887
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
IE+G V+NC+LGTAL+DMYAKCGAV A L+F RM E NVWTWSAMILGLAQHG+A+EAL
Sbjct: 888 IEKGMVVNCRLGTALVDMYAKCGAVCEASLVFHRMLERNVWTWSAMILGLAQHGFAKEAL 947
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
ELF MK SSISPNYVTFLGVLCAC+HAG+V+DGYR+FH+ME+VHGI+PM IHY M DI
Sbjct: 948 ELFPKMKQSSISPNYVTFLGVLCACSHAGLVDDGYRFFHDMEYVHGIEPMMIHYGAMVDI 1007
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGS 436
L+RAG LKEAY FI+NMP + +P+V R LLSA +IH DGVG++VR+RLLELEPR S
Sbjct: 1008 LSRAGRLKEAYNFILNMPVEADPVVWRTLLSACTIHGINDNDGVGDKVRKRLLELEPRRS 1067
Query: 437 QNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELA 496
N V+VAN YAEVG W+K +NVRR MK+ GLKKM G S +E+GGSIHRF+SG D Q++
Sbjct: 1068 GNFVMVANMYAEVGKWDKAANVRRTMKDTGLKKMAGESCIEVGGSIHRFFSGDDPQLDCE 1127
Query: 497 GIYQILETLNLHMKVLN 513
+ Q+L+ LNLHMK ++
Sbjct: 1128 DVLQLLDGLNLHMKTVS 1144
>gi|449519932|ref|XP_004166988.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Cucumis sativus]
Length = 516
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 291/516 (56%), Positives = 376/516 (72%), Gaps = 2/516 (0%)
Query: 1 MVRFPVPTTNHIFPPKPSNCNSD--LLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQN 58
MVR + + FP N +S LS Q LS LK C S HL++IHAQI VSGLQN
Sbjct: 1 MVRLWISAVHQFFPINVHNYSSKPKFLSTKHQLLSLLKHCSSTNHLFEIHAQILVSGLQN 60
Query: 59 DAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFI 118
D+ EL+R LS S+NL+Y S+L + S +PWN +IRGY+ SD P+EA+ +F
Sbjct: 61 DSFFTTELLRVAALSPSRNLSYGCSLLFHCHFHSATMPWNFIIRGYSSSDSPQEAISLFG 120
Query: 119 DMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCR 178
+M+RRG++P T+PF+LKACA ++ L EG Q A K GLD DVY N L+ FYGSC+
Sbjct: 121 EMRRRGVRPNNLTFPFLLKACATLATLQEGKQFHAIAIKCGLDLDVYVRNTLINFYGSCK 180
Query: 179 RKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
R A KVFD+M ER++VSWN +IT CVEN EA+ YF+KM + GFEPDETTM+V+LS
Sbjct: 181 RMSGARKVFDEMTERTLVSWNAVITACVENFCFDEAIDYFLKMGNHGFEPDETTMVVILS 240
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
AC ELGNLSLG+WVH Q++ RG VLN QLGTA +DMYAK G VGCAR +F+ +++ +VWT
Sbjct: 241 ACAELGNLSLGRWVHSQVVGRGMVLNVQLGTAFVDMYAKSGDVGCARHVFNCLKQKSVWT 300
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
WSAMILGLAQHG+A EA+ELF+NM +S I PN+VTF+GVLCAC+HAG+V+ Y YF+ ME
Sbjct: 301 WSAMILGLAQHGFANEAIELFTNMTSSPIVPNHVTFIGVLCACSHAGLVDKSYHYFNLME 360
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD 418
V+GIKPM IHY +M D+L RAG +KEAY IM+MP +P+PIV R LLSA S D
Sbjct: 361 RVYGIKPMMIHYGSMVDVLGRAGQVKEAYELIMSMPVEPDPIVWRTLLSACSGRDVNGGA 420
Query: 419 GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVEL 478
V E R+RLLELEP+ N+V+VANK+AE+GMW++ ++ RR MK+ G+KKM G S +EL
Sbjct: 421 EVAEEARKRLLELEPKRGGNVVMVANKFAELGMWKQAADYRRTMKDRGIKKMAGESCIEL 480
Query: 479 GGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
GGS+ +F+SG+DS+ GIY +L+ LNLHM++ NF
Sbjct: 481 GGSLRKFFSGFDSRAAPDGIYDLLDGLNLHMQLTNF 516
>gi|357487485|ref|XP_003614030.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515365|gb|AES96988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 284/492 (57%), Positives = 376/492 (76%), Gaps = 3/492 (0%)
Query: 25 LSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSI 84
L+ +QCL+ L S L+Q+ AQI ++ L ND IL +LV F +LS KNL++AR +
Sbjct: 7 LTNKQQCLNLLNSLHSITKLHQLQAQIHLNSLHNDTHILSQLVYFFSLSPFKNLSHARKL 66
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
+ ++ N+ PI WN LIRGYA SD P E++WVF M+ G+KP + TYPF+ K+CA
Sbjct: 67 VFHFSNNPSPISWNILIRGYASSDSPIESIWVFKKMRENGVKPNKLTYPFIFKSCAMALV 126
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L EG QV A++ K GLDSDVY NN++ FYG C++ A KVFD+MC R++VSWN ++T
Sbjct: 127 LCEGKQVHADLVKFGLDSDVYVCNNMINFYGCCKKIVYARKVFDEMCVRTIVSWNSVMTA 186
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
CVEN+WL + +GYF KM+D FEPDET+M+++LS C ELG LSLG+WVH QLI +G VL+
Sbjct: 187 CVENVWLSDGIGYFFKMRDCAFEPDETSMVLLLSVCAELGYLSLGRWVHSQLILKGMVLS 246
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM-- 322
LGTAL+DMY K GA+G AR++F RME+ NVWTWSAMI+GLAQHG+AEEAL LF M
Sbjct: 247 VHLGTALVDMYGKSGALGYARVVFERMEKRNVWTWSAMIMGLAQHGFAEEALVLFDMMND 306
Query: 323 -KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAG 381
K+++ISPNYVT+LGVLCAC+HAGMV++G+RYF +ME VHGIKPM +HY M D+L RAG
Sbjct: 307 KKSNNISPNYVTYLGVLCACSHAGMVDEGFRYFRDMEFVHGIKPMMVHYGAMVDVLGRAG 366
Query: 382 HLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVI 441
HL EAY FI +MPF P+PIV R LLSA ++HD + G+G++VR+RLLE+EP+ NLVI
Sbjct: 367 HLGEAYRFIQSMPFAPDPIVWRTLLSACTVHDVCDRTGIGDKVRKRLLEMEPKRGGNLVI 426
Query: 442 VANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQI 501
VAN YAEVG WEK +NVRR M++ GLKKM G S V+LGGS++RF++G+DS+ +L +Y +
Sbjct: 427 VANMYAEVGNWEKAANVRRVMRDGGLKKMAGESCVDLGGSMYRFFAGHDSRPDLMPVYDL 486
Query: 502 LETLNLHMKVLN 513
L+ LNLH+K+++
Sbjct: 487 LDALNLHLKMVH 498
>gi|356567046|ref|XP_003551734.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Glycine max]
Length = 505
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 294/494 (59%), Positives = 367/494 (74%), Gaps = 6/494 (1%)
Query: 25 LSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSI 84
LSK +QCLS L C S L QI AQ+ VSGL D ++L ELV FC+LS SKNL +ARS
Sbjct: 13 LSKKQQCLSLLNSCRSMDQLRQIQAQVHVSGLYQDTRVLSELVYFCSLSPSKNLRHARSF 72
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
+ + S PI WN LIRGYA SD P EA WVF M+ RG P + T+PF+LK+CA S
Sbjct: 73 VHHAATPS-PISWNILIRGYAASDSPLEAFWVFRKMRERGAMPNKLTFPFLLKSCAVASA 131
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L EG QV A+ K GLDSDVY NNL+ FYG C++ DA KVF +M ER+VVSWN ++T
Sbjct: 132 LFEGKQVHADAVKCGLDSDVYVGNNLINFYGCCKKIVDARKVFGEMPERTVVSWNSVMTA 191
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
CVE+LWLG+ +GYF +M GFEPDET+M+++LSAC ELG LSLG+WVH QL+ RG VL+
Sbjct: 192 CVESLWLGDGIGYFFRMWGCGFEPDETSMVLLLSACAELGYLSLGRWVHSQLVLRGMVLS 251
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
QLGTAL+DMY K GA+G AR +F RME NVWTWSAMILGLAQHG+ EEALELF+ M N
Sbjct: 252 VQLGTALVDMYGKSGALGYARDVFERMENRNVWTWSAMILGLAQHGFGEEALELFAIMNN 311
Query: 325 S-----SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILAR 379
+ I PNYVT+LGVLCAC+HAGMV++GY+YFH+ME VHGIKP+ HY M D+L R
Sbjct: 312 NNNDNRDIRPNYVTYLGVLCACSHAGMVDEGYQYFHDMECVHGIKPLMTHYGAMVDVLGR 371
Query: 380 AGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNL 439
AG L+EAY FI +MP +P+P+V R LLSA ++HD G+G V ++LL EPR NL
Sbjct: 372 AGRLEEAYEFIQSMPIEPDPVVWRTLLSACTVHDVHDHTGIGERVSKKLLLKEPRRGGNL 431
Query: 440 VIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIY 499
VIVAN YAEVGMWE+ +NVRR M++ G+KK+ G S V+LGGS+HRF++GYD +L +Y
Sbjct: 432 VIVANMYAEVGMWEEAANVRRVMRDGGMKKVAGESCVDLGGSMHRFFAGYDPCPDLVPVY 491
Query: 500 QILETLNLHMKVLN 513
+L+ LNLH+K++N
Sbjct: 492 HLLDGLNLHLKMVN 505
>gi|449461643|ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Cucumis sativus]
Length = 516
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 290/516 (56%), Positives = 375/516 (72%), Gaps = 2/516 (0%)
Query: 1 MVRFPVPTTNHIFPPKPSNCNSD--LLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQN 58
MVR + + FP N +S LS Q LS L C S HL++IHAQI VSGLQN
Sbjct: 1 MVRLWISAVHQFFPINVHNYSSKPKFLSTKHQLLSLLNHCSSTNHLFEIHAQILVSGLQN 60
Query: 59 DAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFI 118
D+ EL+R LS S+NL+Y S+L + S +PWN +IRGY+ SD P+EA+ +F
Sbjct: 61 DSFFTTELLRVAALSPSRNLSYGCSLLFHCHFHSATMPWNFIIRGYSSSDSPQEAISLFG 120
Query: 119 DMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCR 178
+M+RRG++P T+PF+LKACA ++ L EG Q A K GLD DVY N L+ FYGSC+
Sbjct: 121 EMRRRGVRPNNLTFPFLLKACATLATLQEGKQFHAIAIKCGLDLDVYVRNTLIYFYGSCK 180
Query: 179 RKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
R A KVFD+M ER++VSWN +IT CVEN EA+ YF+KM + GFEPDETTM+V+LS
Sbjct: 181 RMSGARKVFDEMTERTLVSWNAVITACVENFCFDEAIDYFLKMGNHGFEPDETTMVVILS 240
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
AC ELGNLSLG+WVH Q++ RG VLN QLGTA +DMYAK G VGCAR +F+ +++ +VWT
Sbjct: 241 ACAELGNLSLGRWVHSQVVGRGMVLNVQLGTAFVDMYAKSGDVGCARHVFNCLKQKSVWT 300
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
WSAMILGLAQHG+A EA+ELF+NM +S I PN+VTF+GVLCAC+HAG+V+ Y YF+ ME
Sbjct: 301 WSAMILGLAQHGFANEAIELFTNMMSSPIVPNHVTFIGVLCACSHAGLVDKSYHYFNLME 360
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD 418
V+GIKPM IHY +M D+L RAG +KEAY IM+MP +P+PIV R LLSA S D
Sbjct: 361 RVYGIKPMMIHYGSMVDVLGRAGQVKEAYELIMSMPVEPDPIVWRTLLSACSGRDVNGGA 420
Query: 419 GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVEL 478
V E R+RLLELEP+ N+V+VANK+AE+GMW++ ++ RR MK+ G+KKM G S +EL
Sbjct: 421 EVAEEARKRLLELEPKRGGNVVMVANKFAELGMWKQAADYRRTMKDRGIKKMAGESCIEL 480
Query: 479 GGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
GGS+ +F+SG+DS+ GIY +L+ LNLHM++ NF
Sbjct: 481 GGSLRKFFSGFDSRAAPDGIYDLLDGLNLHMQLTNF 516
>gi|297827165|ref|XP_002881465.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327304|gb|EFH57724.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 283/494 (57%), Positives = 354/494 (71%), Gaps = 4/494 (0%)
Query: 21 NSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTY 80
+S SK QCL FLKLC S KHL QIH QI VS LQND+ I+ EL+R +LS +K+L +
Sbjct: 6 DSSFKSKKHQCLIFLKLCSSIKHLLQIHGQIHVSSLQNDSFIISELIRVSSLSHTKDLAF 65
Query: 81 ARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACA 140
AR++L + +DS P WN L RGY+ SD P E++WV+ +MKRR IKP + T+PF+LKACA
Sbjct: 66 ARTLLL-HSSDSTPSTWNMLTRGYSSSDTPVESIWVYSEMKRRRIKPNKLTFPFLLKACA 124
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
GL G Q+Q V K G DSDVY NNL+ YGSC++ DA KVFD+M ER+VVSWN
Sbjct: 125 SFLGLTAGRQIQVEVLKHGFDSDVYVGNNLIHLYGSCKKTSDARKVFDEMTERNVVSWNS 184
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
I+T VEN V F +M F PDETTM+V+LSAC GNLSLGK VH Q++ R
Sbjct: 185 IMTALVENGKFNLVVECFFEMIGRQFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRE 242
Query: 261 TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS 320
LNC+LGTAL+DMYAK G + ARL+F RM + NVWTWSAMI+GLAQ+G+AEEAL+LFS
Sbjct: 243 LELNCRLGTALVDMYAKSGGLKYARLVFERMADKNVWTWSAMIVGLAQYGFAEEALQLFS 302
Query: 321 NM-KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILAR 379
M K SS+ PNYVTFLGVLCAC+H G+V+DGY+YFHEME H IKPM IHY M DIL R
Sbjct: 303 KMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKRHKIKPMMIHYGAMVDILGR 362
Query: 380 AGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNL 439
AG L EAY FI MPF+P+ +V R LLSA SIH + G+G +V++RL+ELEP+ S NL
Sbjct: 363 AGRLNEAYDFIQKMPFEPDAVVWRTLLSACSIHHDEDDKGIGEKVKKRLIELEPKRSGNL 422
Query: 440 VIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIY 499
VIVAN++AE MW++ + VRR MK +KK+ G S +ELGGS H+F+SGYD + E IY
Sbjct: 423 VIVANRFAEARMWDEAAEVRRVMKETKMKKIAGESCLELGGSFHKFFSGYDPRPEYVSIY 482
Query: 500 QILETLNLHMKVLN 513
++L+ + N
Sbjct: 483 ELLDLFKFQLTCDN 496
>gi|15228026|ref|NP_181211.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216191|sp|Q9ZQA1.1|PP188_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g36730
gi|4415918|gb|AAD20149.1| hypothetical protein [Arabidopsis thaliana]
gi|330254198|gb|AEC09292.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 501
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 280/485 (57%), Positives = 352/485 (72%), Gaps = 4/485 (0%)
Query: 26 SKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
S+ QCL FLKLC S KHL QIH QI +S LQND+ I+ ELVR +LS +K+L +AR++L
Sbjct: 11 SRKHQCLIFLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLL 70
Query: 86 CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL 145
+ +DS P WN L RGY+ SD P E++WV+ +MKRRGIKP + T+PF+LKACA GL
Sbjct: 71 L-HSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGL 129
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
G Q+Q V K G D DVY NNL+ YG+C++ DA KVFD+M ER+VVSWN I+T
Sbjct: 130 TAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTAL 189
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
VEN L F +M F PDETTM+V+LSAC GNLSLGK VH Q++ R LNC
Sbjct: 190 VENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNC 247
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM-KN 324
+LGTAL+DMYAK G + ARL+F RM + NVWTWSAMI+GLAQ+G+AEEAL+LFS M K
Sbjct: 248 RLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKE 307
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
SS+ PNYVTFLGVLCAC+H G+V+DGY+YFHEME +H IKPM IHY M DIL RAG L
Sbjct: 308 SSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLN 367
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
EAY FI MPF+P+ +V R LLSA SIH + +G+G +V++RL+ELEP+ S NLVIVAN
Sbjct: 368 EAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVAN 427
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILET 504
++AE MW + + VRR MK +KK+ G S +ELGGS HRF+SGYD + E IY++L+
Sbjct: 428 RFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLDL 487
Query: 505 LNLHM 509
+
Sbjct: 488 FKFQL 492
>gi|297834252|ref|XP_002885008.1| hypothetical protein ARALYDRAFT_478816 [Arabidopsis lyrata subsp.
lyrata]
gi|297330848|gb|EFH61267.1| hypothetical protein ARALYDRAFT_478816 [Arabidopsis lyrata subsp.
lyrata]
Length = 369
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/373 (56%), Positives = 262/373 (70%), Gaps = 8/373 (2%)
Query: 22 SDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYA 81
S S+ QCL FLKLC S KHL QIH +I VS LQND+ I+ ELVR +LS K+LT+A
Sbjct: 1 SSFKSRKHQCLIFLKLCSSFKHLLQIHGKIHVSSLQNDSFIIIELVRVSSLSLVKDLTFA 60
Query: 82 RSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAE 141
R++L + +DS P WN L RGY+ SD P E++W + +M+RRGI P + T+PF+LKACA
Sbjct: 61 RTLLL-HSSDSTPSTWNMLNRGYSSSDTPVESIWFYSEMERRGINPNKLTFPFLLKACAS 119
Query: 142 ISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVI 201
GL G Q+Q V K G DSDVY NNL+ YGSC++ DA K+FD+M +R+ VSWN I
Sbjct: 120 FLGLTAGRQIQVEVLKHGFDSDVYVGNNLIHLYGSCKKTYDARKMFDEMTDRNFVSWNSI 179
Query: 202 ITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQ---LIE 258
+T VEN F ++ F PDETTM+V+LSAC GNLSLGK+ H Q ++
Sbjct: 180 MTALVENGKFNLVFECFCEIIGRRFCPDETTMVVLLSACC--GNLSLGKF-HSQSRRVVV 236
Query: 259 RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALEL 318
R LNC+LGTAL+DMYAK G + ARL+F RM + NVWTW+AMI+GLAQ+G+ EEAL+L
Sbjct: 237 RELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWNAMIVGLAQYGFVEEALQL 296
Query: 319 FSN-MKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL 377
F+ MK S++ P YVTFLGVLCAC+H +V+DGY+YFHEME H IKPM IHY M DIL
Sbjct: 297 FAKMMKESTVRPKYVTFLGVLCACSHTALVDDGYKYFHEMEKAHKIKPMIIHYRAMVDIL 356
Query: 378 ARAGHLKEAYTFI 390
RA L EAY FI
Sbjct: 357 GRACRLNEAYDFI 369
>gi|356529932|ref|XP_003533540.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g36730-like [Glycine max]
Length = 407
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/364 (55%), Positives = 264/364 (72%), Gaps = 12/364 (3%)
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN----LWLGEAV 215
L S+VY NNL+ FY C++ DA KVF+ M ++++VS N +IT CVE+ LW G+ +
Sbjct: 46 LMSNVYVPNNLINFYWCCKKIVDAXKVFEKMPDKTIVSXNSVITACVESCVESLWSGDGI 105
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY 275
YF +M GFEPD T+M+++LSAC ELG LSLG+WVH QL+ RG VL+ QLGTAL+DMY
Sbjct: 106 EYFFRMWGCGFEPDXTSMVLLLSACAELGYLSLGRWVHSQLVLRGMVLSVQLGTALVDMY 165
Query: 276 AKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH-GYAEEALELFSNMKNS-----SISP 329
K GA+G AR +F RME+ NVWTWSAMILGLA H G+ EE L LF+ M N+ I P
Sbjct: 166 GKSGALGYARAVFERMEKRNVWTWSAMILGLAPHAGFREEVLALFAMMSNNNNNSRDIRP 225
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
NYVT+LGVLCAC+HAGMV + Y+YFH+ME VHGIK + +HY M D+L RA L+EAY F
Sbjct: 226 NYVTYLGVLCACSHAGMVNEDYKYFHDMECVHGIKTLMMHYGAMVDVLGRAARLEEAYEF 285
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
I +MP +P+P+V R LLSA ++HD GVG VR++LL +EPR NLVIVAN +AEV
Sbjct: 286 IQSMPIEPDPVVWRTLLSACTVHDVHDXTGVGERVRKKLLLMEPRRGGNLVIVANMFAEV 345
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
MWEK +NV ++ G+KK+ G S +LGGS+HRF++GYD +L +Y +L+ NLH+
Sbjct: 346 EMWEKAANVGH--ESGGMKKVAGESCADLGGSMHRFFAGYDPCPDLVPVYHLLDGFNLHL 403
Query: 510 KVLN 513
K++N
Sbjct: 404 KMVN 407
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 10/136 (7%)
Query: 117 FIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGS 176
F M G +P + +L ACAE+ L+ G V + + G+ V LV YG
Sbjct: 108 FFRMWGCGFEPDXTSMVLLLSACAELGYLSLGRWVHSQLVLRGMVLSVQLGTALVDMYGK 167
Query: 177 CRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV--------GYFVKMKDLGFEP 228
A VF+ M +R+V +W+ +I + E V +D+ P
Sbjct: 168 SGALGYARAVFERMEKRNVWTWSAMILGLAPHAGFREEVLALFAMMSNNNNNSRDI--RP 225
Query: 229 DETTMLVVLSACTELG 244
+ T L VL AC+ G
Sbjct: 226 NYVTYLGVLCACSHAG 241
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 12/201 (5%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H+Q+ + G+ Q+ LV S L YAR++ +V W+ +I G A
Sbjct: 142 VHSQLVLRGMVLSVQLGTALVDM--YGKSGALGYARAVFERMEKRNV-WTWSAMILGLAP 198
Query: 107 SDRPREAVWVFI------DMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT-KSG 159
RE V + R I+P TY VL AC+ +NE + ++ G
Sbjct: 199 HAGFREEVLALFAMMSNNNNNSRDIRPNYVTYLGVLCACSHAGMVNEDYKYFHDMECVHG 258
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVC-VENLWLGEAVGY 217
+ + + +V G R +A + M E V W +++ C V ++ VG
Sbjct: 259 IKTLMMHYGAMVDVLGRAARLEEAYEFIQSMPIEPDPVVWRTLLSACTVHDVHDXTGVGE 318
Query: 218 FVKMKDLGFEPDETTMLVVLS 238
V+ K L EP LV+++
Sbjct: 319 RVRKKLLLMEPRRGGNLVIVA 339
>gi|223947353|gb|ACN27760.1| unknown [Zea mays]
gi|413934876|gb|AFW69427.1| selenium-binding protein [Zea mays]
Length = 504
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/480 (45%), Positives = 302/480 (62%), Gaps = 16/480 (3%)
Query: 40 SKKHLYQIHAQIQVSG-LQNDAQILKELVRFCTLSSSK-NLTYARSILCNYVNDSVPIP- 96
+ +HL QIHA + SG L + L L R +L L YA +L S+P P
Sbjct: 17 TGRHLRQIHAHLVTSGHLSSLGPTL--LHRLISLHPPHLQLAYAHRLLL-----SIPSPP 69
Query: 97 ---WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG--LNEGMQV 151
+N L+ A S P A ++I ++RRG+ P T P VLKA A + L
Sbjct: 70 LDLFNLLLPPLASSPDPAAAAGLYIHLRRRGLGPDAHTLPHVLKALARLGPGCLPLVACT 129
Query: 152 QANVTKSGLD-SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
A K+GL + VY N L+ Y +C A +VFD+M +VVSWN ++T C +N
Sbjct: 130 HAEAVKTGLARAVVYVPNALMSAYSACGHLHRAMQVFDEMPRWTVVSWNTVLTACADNGR 189
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
G FV M + G PD+TT +V+L+A ELGNL+LGKW H Q++ R T + QLGTA
Sbjct: 190 HDRCAGMFVNMLEAGSVPDQTTFVVMLTAAAELGNLALGKWAHGQVLTRRTDMTLQLGTA 249
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
+++MY KCG V A LF M NVWTWSAMI+G +Q+G EALELF MK++S++PN
Sbjct: 250 VVNMYTKCGEVSYASRLFENMAARNVWTWSAMIMGYSQNGMVREALELFDRMKDASVAPN 309
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
YVTFLG+LC C+HAG+V +G ++FHEMEHV+GIKPM HY M D+L R G L+EA+ F+
Sbjct: 310 YVTFLGLLCGCSHAGLVNEGRKFFHEMEHVYGIKPMMTHYSAMVDVLGRNGRLQEAFEFV 369
Query: 391 MNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVG 450
++MP + + +V R LLSA +H +K G+ ++ ++RLLELEPR S N V+VAN Y+++G
Sbjct: 370 VDMPVEADTVVWRTLLSACQLHSSKDCIGIADKAQKRLLELEPRRSGNHVMVANIYSDIG 429
Query: 451 MWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+W+K + RR M+ G+KKM G S VE+GG IHRF SG +S L G+Y++L LN++M+
Sbjct: 430 LWDKAAMARRVMREGGMKKMAGESCVEVGGRIHRFISGDESCPGLGGVYRVLHELNINMR 489
>gi|242094160|ref|XP_002437570.1| hypothetical protein SORBIDRAFT_10g029530 [Sorghum bicolor]
gi|241915793|gb|EER88937.1| hypothetical protein SORBIDRAFT_10g029530 [Sorghum bicolor]
Length = 503
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/426 (46%), Positives = 279/426 (65%), Gaps = 7/426 (1%)
Query: 92 SVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG--L 145
S+P P +N L+ A S P A +++ ++R G+ P T P VLKA A ++ L
Sbjct: 63 SIPSPPLDLFNLLLPPLASSPDPAVAAGLYVHLRRGGLSPDAHTLPHVLKALARLAPGCL 122
Query: 146 NEGMQVQANVTKSGLD-SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
A K+GL + VY N L+ Y +C A +VFD+M R+VVSWN +T
Sbjct: 123 PLVACTHAEAVKTGLARAVVYVPNALMAAYSACGHFGHAMQVFDEMLRRTVVSWNTALTT 182
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
C +N F M + G PD+TT +V+L+ ELGNL+LGKW H Q++ R +
Sbjct: 183 CADNGRHDRCARMFADMVEAGSVPDQTTFVVMLTTAAELGNLALGKWAHGQVLARRLDMT 242
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
QLGTA ++MYAKCG V A LF RM NVWTWS MI+G +QHG A+ ALELF+ MK+
Sbjct: 243 LQLGTAAVNMYAKCGEVSYASRLFERMAARNVWTWSVMIMGYSQHGMAQAALELFNRMKD 302
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+S++PNYVTFLG+LC C+HAG+V +G ++FHEM+HV+GIKPM HY M D+L R GHL+
Sbjct: 303 ASVAPNYVTFLGLLCGCSHAGLVTEGRKFFHEMQHVYGIKPMMTHYSAMVDVLGRNGHLQ 362
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
EA+ F+++MP + + +V R LLSA +H +K G+ ++V++RLL+LEPR S N V+VAN
Sbjct: 363 EAFDFVVDMPVEADSVVWRTLLSACQLHSSKDCIGIVDKVQKRLLKLEPRRSGNHVMVAN 422
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILET 504
Y+++G+W+K + +RR M+ GLKKM G S VE+GG I RF SG +S L G+Y++L
Sbjct: 423 IYSDIGLWDKAAMMRRVMREGGLKKMAGESCVEVGGRIQRFISGDESCPGLDGVYRVLHE 482
Query: 505 LNLHMK 510
LN++M+
Sbjct: 483 LNINMR 488
>gi|357158377|ref|XP_003578109.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Brachypodium distachyon]
Length = 496
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/475 (45%), Positives = 299/475 (62%), Gaps = 14/475 (2%)
Query: 43 HLYQIHAQIQVSG-LQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
H+ Q+HA + SG L IL L R +L S +L A+ +L + + + + +N L+
Sbjct: 15 HIRQLHAHVITSGRLPTVGPIL--LPRLISLPS-PDLQLAQRLLLSLPSPPLAL-YNLLL 70
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG-----MQVQANVT 156
A S P A +F+ ++R G+ P T P VLKA ++GL G A
Sbjct: 71 PPLASSLEPSAAARLFLHLRRSGLFPDAHTLPHVLKA---LAGLAPGSLPLVASTHAEAI 127
Query: 157 KSGLD-SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
K GL+ + VY N L+ Y SC A +VFD+M R+VVSWN +T CV+N + V
Sbjct: 128 KDGLECAVVYVRNALMAAYSSCGHLAGAIQVFDEMPRRTVVSWNTALTACVDNDYHSGCV 187
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY 275
G F M + GF PD+TT + ++SA ELGNL LGKW H Q++ R + QLGTA ++MY
Sbjct: 188 GLFSAMVEAGFHPDQTTFVCMMSAAAELGNLPLGKWAHGQVVARRLDMTLQLGTATVNMY 247
Query: 276 AKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFL 335
AKCG V AR LF RM NVWTWSAMI+G AQ+G A EAL+LF MK +SI+PNYVTFL
Sbjct: 248 AKCGMVSYARRLFERMPAWNVWTWSAMIMGFAQNGLAWEALKLFERMKGASIAPNYVTFL 307
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPF 395
G+LCAC+HAG+V++G ++F EM HV+ I+PM HY M D+L R G L+EAY F+M+MP
Sbjct: 308 GLLCACSHAGLVDEGRQFFREMRHVYRIEPMMRHYSAMVDVLGRNGRLQEAYDFVMDMPV 367
Query: 396 QPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKV 455
+ +P+V R LL A + +K + ++V++RLLELEPR S N V+VAN Y+++G W++
Sbjct: 368 EADPVVWRTLLGACQLQSSKDCIDIVSKVQKRLLELEPRRSGNYVMVANIYSDIGSWDEA 427
Query: 456 SNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+ RR M+ G+KKM G S VE+GG +H F SG DS E G + I+ L+L+M+
Sbjct: 428 AKARRLMREGGMKKMAGESCVEVGGQVHCFISGDDSCPEYHGAFSIVHELDLNMR 482
>gi|226507810|ref|NP_001148280.1| selenium-binding protein [Zea mays]
gi|195617122|gb|ACG30391.1| selenium-binding protein [Zea mays]
Length = 504
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/480 (45%), Positives = 301/480 (62%), Gaps = 16/480 (3%)
Query: 40 SKKHLYQIHAQIQVSG-LQNDAQILKELVRFCTLSSSK-NLTYARSILCNYVNDSVPIP- 96
+ +HL QIHA + SG L + L L R +L L YA +L S+P P
Sbjct: 17 TGRHLRQIHAHLVTSGHLSSLGPTL--LHRLISLHPPHLQLAYAHRLLL-----SIPSPP 69
Query: 97 ---WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG--LNEGMQV 151
+N L+ A S P A ++I ++RRG+ P T P VLKA A + L
Sbjct: 70 LDLFNLLLPPLASSPDPAAAAGLYIHLRRRGLGPDAHTLPHVLKALARLGPGCLPLVACT 129
Query: 152 QANVTKSGLD-SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
A K+GL + VY N L+ Y +C A +VFD+M +VVSWN ++T C +N
Sbjct: 130 HAEAVKTGLARAVVYVPNALMSAYSACGHLHRAMQVFDEMPRWTVVSWNTVLTACADNGR 189
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
G FV M + G P++TT +V+L+A ELGNL+LGKW H Q++ R + QLGTA
Sbjct: 190 HDWCAGMFVNMLEAGSVPNQTTFVVMLTAAAELGNLALGKWAHGQVLTRRIDMTLQLGTA 249
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
+++MY KCG V A LF M NVWTWSAMI+G +Q+G EALELF MK++S++PN
Sbjct: 250 VVNMYTKCGEVSYASCLFENMAARNVWTWSAMIMGYSQNGMVREALELFDRMKDASVAPN 309
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
YVTFLG+LC C+HAG+V +G ++FHEMEHV+GIKPM HY M D+L R G L+EA+ F+
Sbjct: 310 YVTFLGLLCGCSHAGLVNEGRKFFHEMEHVYGIKPMMTHYSAMVDVLGRNGLLQEAFEFV 369
Query: 391 MNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVG 450
++MP + + +V R LLSA +H +K G+ ++V++RLLELEPR S N V+VAN Y+++G
Sbjct: 370 VDMPVEADTVVWRTLLSACQLHSSKDCIGIVDKVQKRLLELEPRRSGNHVMVANIYSDIG 429
Query: 451 MWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+W+K + RR M+ G+KKM G S VE+GG I RF SG +S L G+Y++L LN++M+
Sbjct: 430 LWDKAAMARRVMREGGMKKMAGESCVEVGGRIRRFISGDESCPGLGGVYRVLHELNINMR 489
>gi|125563703|gb|EAZ09083.1| hypothetical protein OsI_31349 [Oryza sativa Indica Group]
Length = 503
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/472 (45%), Positives = 291/472 (61%), Gaps = 8/472 (1%)
Query: 43 HLYQIHAQIQVSG-LQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
HL QIHA + SG L + +L L R +L + R +L +N L+
Sbjct: 21 HLRQIHAHLLTSGRLPSLGPVL--LRRLISLPNPHLHLAHRLLLSLPSPSLDL--FNLLL 76
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS--GLNEGMQVQANVTKSG 159
A S P A +F+ ++R G++P T P VLKA A ++ L V + K G
Sbjct: 77 PPLASSPDPSTAAALFLRLRRGGLRPDAHTLPHVLKALARLAPGSLPVVGSVHSEAVKDG 136
Query: 160 LDSDV-YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
L S V Y N L+ Y +C + A +VFD+M R+VVSWN +T C N V F
Sbjct: 137 LASAVVYVPNALMAAYSACGQLERAVQVFDEMPRRTVVSWNTALTACAGNGHHELCVELF 196
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
+M + G PD TT +V+LSA ELGNL+LGKW H Q++ R + QLGTA ++MY+KC
Sbjct: 197 AEMLEAGSVPDPTTFVVMLSAAAELGNLALGKWAHGQVVSRRLDMTLQLGTAAVNMYSKC 256
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
GAV A LF RM NVWTW+AMI+G AQ+G A+EALELF MK S I PNYVTFLG+L
Sbjct: 257 GAVSYALRLFERMPARNVWTWTAMIVGFAQNGLAQEALELFDRMKLSKIIPNYVTFLGLL 316
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
CAC+HAG+V++G R+FHEM+HV+GI PM HY M D+L R G L+EAY F++ MP + +
Sbjct: 317 CACSHAGLVDEGRRFFHEMQHVYGIVPMMTHYSAMVDVLGRNGLLQEAYDFVVGMPVEAD 376
Query: 399 PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
P+V R LL+A +H +K + ++V+ +LLELEPR S N V+V+N Y E+G W++ +
Sbjct: 377 PVVWRTLLAACQLHSSKDCIEIIDKVQGKLLELEPRRSGNYVMVSNIYCEIGSWDEAAKA 436
Query: 459 RRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
RR M+ G+KK+ G S VE+GG +HRF G DS E G +IL LNL+M+
Sbjct: 437 RRVMREGGMKKVAGESCVEVGGRVHRFVFGDDSCPEFHGACRILHELNLNMR 488
>gi|115479131|ref|NP_001063159.1| Os09g0412900 [Oryza sativa Japonica Group]
gi|50251469|dbj|BAD28534.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|50252346|dbj|BAD28379.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113631392|dbj|BAF25073.1| Os09g0412900 [Oryza sativa Japonica Group]
gi|215717103|dbj|BAG95466.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215736827|dbj|BAG95756.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 503
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/472 (44%), Positives = 288/472 (61%), Gaps = 8/472 (1%)
Query: 43 HLYQIHAQIQVSG-LQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
HL QIHA + SG + +L L R +L + R +L +N L+
Sbjct: 21 HLRQIHAHLLTSGRFPSLGPVL--LRRLISLPNPHLHLAHRLLLSLPSPSLDL--FNLLL 76
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS--GLNEGMQVQANVTKSG 159
A S P A +F+ ++R G++P T P VLKA A ++ L V + K G
Sbjct: 77 PPLASSPDPSTAAALFLRLRRGGLRPDAHTLPHVLKALARLAPGSLPVVGSVHSEAVKDG 136
Query: 160 LDSDV-YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
L S V Y N L+ Y +C + A +VFD+M R+VVSWN +T C N V F
Sbjct: 137 LASAVVYVPNALMAAYSACGQLERAVQVFDEMPRRTVVSWNTALTACAGNGRHELCVELF 196
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
+M + G PD TT +V+LSA ELGNL+LGKW H Q++ R + QLGTA ++MY+KC
Sbjct: 197 AEMLEAGSVPDPTTFVVMLSAAAELGNLALGKWAHGQVVSRRLDMTLQLGTAAVNMYSKC 256
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
V A LF RM NVWTW+AMI+G AQ+G A+EALELF MK S I PNYVTFLG+L
Sbjct: 257 ATVSYALRLFERMPARNVWTWTAMIVGFAQNGLAQEALELFDRMKLSKIIPNYVTFLGLL 316
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
CAC+HAG+V++G R+FHEM+HV+GI PM HY M D+L R G L+EAY F++ MP + +
Sbjct: 317 CACSHAGLVDEGRRFFHEMQHVYGIVPMMTHYSAMVDVLGRNGLLQEAYDFVVGMPVEAD 376
Query: 399 PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
P+V R LL+A +H +K + ++V+ +LLELEPR S N V+V+N Y E+G W++ +
Sbjct: 377 PVVWRTLLAACQLHSSKDCIEIIDKVQGKLLELEPRRSGNYVMVSNIYCEIGSWDEAAKA 436
Query: 459 RRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
RR M+ G+KK+ G S VE+GG +HRF G DS E G +IL LNL+M+
Sbjct: 437 RRVMREGGMKKVAGESCVEVGGRVHRFIFGDDSCPEFHGACRILHELNLNMR 488
>gi|125605677|gb|EAZ44713.1| hypothetical protein OsJ_29343 [Oryza sativa Japonica Group]
Length = 505
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/417 (47%), Positives = 268/417 (64%), Gaps = 3/417 (0%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS--GLNEGMQVQAN 154
+N L+ A S P A +F+ ++R G++P T P VLKA A ++ L V +
Sbjct: 74 FNLLLPPLASSPDPSTAAALFLRLRRGGLRPDAHTLPHVLKALARLAPGSLPVVGSVHSE 133
Query: 155 VTKSGLDSDV-YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
K GL S V Y N L+ Y +C + A +VFD+M R+VVSWN +T C N
Sbjct: 134 AVKDGLASAVVYVPNALMAAYSACGQLERAVQVFDEMPRRTVVSWNTALTACAGNGRHEL 193
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
V F +M + G PD TT +V+LSA ELGNL+LGKW H Q++ R + QLGTA ++
Sbjct: 194 CVELFAEMLEAGSVPDPTTFVVMLSAAAELGNLALGKWAHGQVVSRRLDMTLQLGTAAVN 253
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MY+KC V A LF RM NVWTW+AMI+G AQ+G A+EALELF MK S I PNYVT
Sbjct: 254 MYSKCATVSYALRLFERMPARNVWTWTAMIVGFAQNGLAQEALELFDRMKLSKIIPNYVT 313
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
FLG+LCAC+HAG+V++G R+FHEM+HV+GI PM HY M D+L R G L+EAY F++ M
Sbjct: 314 FLGLLCACSHAGLVDEGRRFFHEMQHVYGIVPMMTHYSAMVDVLGRNGLLQEAYDFVVGM 373
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
P + +P+V R LL+A +H +K + ++V+ +LLELEPR S N V+V+N Y E+G W+
Sbjct: 374 PVEADPVVWRTLLAACQLHSSKDCIEIIDKVQGKLLELEPRRSGNYVMVSNIYCEIGSWD 433
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+ + RR M+ G+KK+ G S VE+GG +HRF G DS E G +IL LNL+M+
Sbjct: 434 EAAKARRVMREGGMKKVAGESCVEVGGRVHRFIFGDDSCPEFHGACRILHELNLNMR 490
>gi|297849370|ref|XP_002892566.1| hypothetical protein ARALYDRAFT_888304 [Arabidopsis lyrata subsp.
lyrata]
gi|297338408|gb|EFH68825.1| hypothetical protein ARALYDRAFT_888304 [Arabidopsis lyrata subsp.
lyrata]
Length = 317
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 176/314 (56%), Positives = 218/314 (69%), Gaps = 16/314 (5%)
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
L RGY+ SD E++W + +M RRGIKP + T+PF+LK +Q V K G
Sbjct: 2 LSRGYSSSDTLVESIWFYSEMGRRGIKPNKLTFPFLLK-------------IQVEVLKHG 48
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
DSDVY NNL+ YGSC++ DA KVFD+M +R+ VSWN I+T VEN F
Sbjct: 49 FDSDVYVGNNLIHLYGSCKKTSDARKVFDEMTDRNFVSWNSIMTALVENGKFNLVFECFC 108
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+M F PDETTM+V+LSAC GNLSLGK VH Q++ R LNC+LGTAL+DMYAK G
Sbjct: 109 EMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVVVRELELNCRLGTALVDMYAKSG 166
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVL 338
+ ARL+F RM + NVWTWSAMI+GLAQ+G+AEEAL+LF+ M K S++ PNYVTFL VL
Sbjct: 167 GLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFAKMMKESTVRPNYVTFLSVL 226
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
CAC+H +V+DGY+YFH+ME H IKPM IHY M DIL RAG L EAY FI PF+P+
Sbjct: 227 CACSHTSLVDDGYKYFHKMEKAHKIKPMMIHYRAMVDILGRAGRLNEAYDFIKKKPFEPD 286
Query: 399 PIVLRALLSASSIH 412
+V R LLSA SI+
Sbjct: 287 AVVWRTLLSACSIY 300
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 191/484 (39%), Positives = 283/484 (58%), Gaps = 7/484 (1%)
Query: 30 QCLSFLKLCCSKKH-LYQIHAQIQVSGLQ-NDAQILKELVRFCTLSSSKNLTYARSILCN 87
+C+S L+ C S KH L QIHA G+ N+ + K L+ F +S S ++YA ++
Sbjct: 19 KCISLLQFCASSKHKLKQIHAFSIRHGVSLNNPDMGKHLI-FTIVSLSAPMSYAYNVFTV 77
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
N +V WN +IRGYA SD P A + M ++P TYPF+LKA ++ + E
Sbjct: 78 IHNPNV-FTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVRE 136
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G + + ++G +S V+ N+L+ Y +C A KVF+ M ER +V+WN +I
Sbjct: 137 GEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFAL 196
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
N EA+ F +M G EPD T++ +LSA ELG L LG+ VH+ L++ G N +
Sbjct: 197 NGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHV 256
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
+L+D+YAKCGA+ A+ +FS M E N +W+++I+GLA +G+ EEALELF M+ +
Sbjct: 257 TNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGL 316
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
P+ +TF+GVL AC+H GM+++G+ YF M+ GI P HY M D+L+RAG +K+AY
Sbjct: 317 VPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAY 376
Query: 388 TFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYA 447
+I NMP QPN ++ R LL A +IH G+G R LL LEP+ S + V+++N YA
Sbjct: 377 EYIQNMPVQPNAVIWRTLLGACTIHG---HLGLGEIARSHLLNLEPKHSGDYVLLSNLYA 433
Query: 448 EVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNL 507
W V +RR M G+KK G S VELG ++ F G S + +Y +LE +
Sbjct: 434 SERRWSDVQVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITE 493
Query: 508 HMKV 511
+K+
Sbjct: 494 LLKL 497
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 188/487 (38%), Positives = 281/487 (57%), Gaps = 5/487 (1%)
Query: 29 RQCLSFLKLCCSKKHLY-QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
++C++ L C S K + QIHA G+ + + + F LS ++YA I
Sbjct: 40 KKCIALLLSCASSKFKFRQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQ 99
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
N ++ WN +IRGYA S+ P A+ ++ M I+P TYPF+LKA A++ + E
Sbjct: 100 IQNPNI-FTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVRE 158
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G +V + ++G +S V+ N LV Y +C A K+F+ M ER++V+WN +I
Sbjct: 159 GEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYAL 218
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
N EA+ F +M G EPD TM+ +LSAC ELG L+LG+ H+ +++ G N
Sbjct: 219 NGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHA 278
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
G AL+D+YAKCG++ A +F MEE +V +W+++I+GLA +G+ +EALELF ++ +
Sbjct: 279 GNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGL 338
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
P+ +TF+GVL AC+H GMV++G+ YF M+ +GI P HY M D+L RAG +K+A+
Sbjct: 339 MPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAH 398
Query: 388 TFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYA 447
FI NMP QPN +V R LL A +IH +G R +LL+LEP+ S + V+++N YA
Sbjct: 399 EFIQNMPMQPNAVVWRTLLGACTIHG---HLALGEVARAQLLQLEPKHSGDYVLLSNLYA 455
Query: 448 EVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNL 507
W V VRR M G+KK G S VEL +H F G S + IY L +
Sbjct: 456 SEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITK 515
Query: 508 HMKVLNF 514
+K+ +
Sbjct: 516 LLKLEGY 522
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 179/487 (36%), Positives = 272/487 (55%), Gaps = 6/487 (1%)
Query: 30 QCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
Q +S +K C K HL QIHA I + L + I + + LS S+++ Y+ + +
Sbjct: 70 QLISLIKSCSKKTHLLQIHAHIIRTSLIQNHFISLQFLSRAALSPSRDMGYSSQVFSQIM 129
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
S +N +IR Y+ S P + +++ +M+RRG+ P + FV+K+C IS L G+
Sbjct: 130 KPSGS-QYNVMIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIRISSLMGGL 188
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ A + + G SD L+ Y C + +ACKVFD++ + VSWNV+I+ C+ N
Sbjct: 189 QIHARILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVLISCCIHNR 248
Query: 210 WLGEAVGYFVKMKDL--GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
+A+ F M+ GFEPD+ T L++L AC LG L G+ VH + E G L
Sbjct: 249 RTRDALRMFDIMQSTADGFEPDDVTCLLLLQACANLGALEFGERVHNYIEEHGYDGALNL 308
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
+LI MY++CG + A +F RM+E NV +WSAMI G A HGY EA+E F M+ +
Sbjct: 309 CNSLITMYSRCGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGV 368
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
SP+ T GVL AC+H G+V+DG +F M V GI+P HY M D+L RAG L +AY
Sbjct: 369 SPDDQTLTGVLSACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAY 428
Query: 388 TFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYA 447
IM+M +P+ + R LL A IH +G V L+EL+ + + + V++ N Y+
Sbjct: 429 QLIMSMVIKPDSTLWRTLLGACRIH---RHATLGERVIGHLIELKAQEAGDYVLLLNIYS 485
Query: 448 EVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNL 507
VG W+KV+++R+FMK G++ G S +EL G +H F IY++L+ +
Sbjct: 486 SVGNWDKVTDLRKFMKEKGIQTSPGCSTIELKGKVHEFVVDDILHPRTDEIYEMLDEIGK 545
Query: 508 HMKVLNF 514
+K+ +
Sbjct: 546 QLKIAGY 552
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 189/529 (35%), Positives = 287/529 (54%), Gaps = 29/529 (5%)
Query: 6 VPTTNHIFPPKPSNC--NSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQIL 63
+P ++ + P P++ N+D LS + C K L QIHAQ+ +GL D
Sbjct: 11 LPRSHSLPTPNPNSITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSA 70
Query: 64 KELVRFCTLSSSKNLTYARSILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFID 119
L+ LS +L YA+ + D +P P WN LIR YA S P +++ +F+
Sbjct: 71 SRLITAAALSPFPSLDYAQQVF-----DQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLR 125
Query: 120 MKRRGIK-PTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCR 178
M + P +FT+PF++KA +E+ L G V K L SDV+ N+L+ FY C
Sbjct: 126 MLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCG 185
Query: 179 RKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
+VF + R VVSWN +IT V+ EA+ F +M+ +P+ TM+ VLS
Sbjct: 186 ELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLS 245
Query: 239 ACTELGNLSLGKWVHLQLIERGTVL-NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVW 297
AC + + G+WVH IER + + L A++DMY KCG+V A+ LF +M E ++
Sbjct: 246 ACAKKSDFEFGRWVH-SYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIV 304
Query: 298 TWSAMIL------------GLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+W+ M++ GLA HG+ ++A+ LFS M+ + PN VTF +LCAC+H G
Sbjct: 305 SWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVG 364
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+VE+G +F++ME V+G+ P HY M DIL RAG L+EA I MP P V AL
Sbjct: 365 LVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGAL 424
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
L A +IH+ + + +L+ELEP V+++N YA+ G W++VS +R+ M++V
Sbjct: 425 LGACTIHENVV---LAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDV 481
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
GLKK G S +E+ G +H F G +S IY L+ + ++ + +
Sbjct: 482 GLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGY 530
>gi|147810456|emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]
Length = 516
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 181/464 (39%), Positives = 265/464 (57%), Gaps = 6/464 (1%)
Query: 15 PKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSS 74
P + N S+ + +S K C S KHL Q+HA + +GL+ + ++ +++ FC +S
Sbjct: 38 PTTLSENEGFDSREERVMSVFKQCESMKHLEQLHAHVIQTGLEQNLFVMGKIIVFCAVSE 97
Query: 75 SKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPF 134
++ YA + + + WN +IRG + +P +A + M+ +G FTY F
Sbjct: 98 CGSMDYALRVF-GKIENPDGFLWNTMIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYSF 156
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
++K C ++ G Q+ NV K GL+ V+ N LV YG + A +F++M +
Sbjct: 157 LVKVCGQLGSDLLGKQIHCNVLKHGLEEHVFVRNTLVHMYGMFKDIEAATHLFEEMPKSY 216
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHL 254
+V+WN II V EA+ F +M G +PD+ T +V LSAC LG L +G+ VH
Sbjct: 217 LVAWNTIIDCNVYCGRYKEAIELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVHS 276
Query: 255 QLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEE 314
+ G + +LIDMYAKCG V A +F++M+ N+ +W+ MILGLA HG+ +E
Sbjct: 277 CIDHTGLGNVVSVSNSLIDMYAKCGVVEAAYEIFNKMKGRNIVSWNTMILGLAMHGHGDE 336
Query: 315 ALELFSNMKNSSI-SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
ALELFS M + +PN VTFLGVLCAC+H GMVE+G RYF M + I+P HY +M
Sbjct: 337 ALELFSKMLEEKLATPNEVTFLGVLCACSHGGMVEEGRRYFDIMRRDYNIQPTIKHYGSM 396
Query: 374 ADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP 433
DIL RAG ++EAY I +MP + N IV R LL+A +H + +VR+ LLELEP
Sbjct: 397 VDILGRAGLVEEAYRLIKSMPIESNSIVWRTLLAACRVHG---NLELAEQVRQXLLELEP 453
Query: 434 RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMK-GMSWV 476
S + V++AN YA G W KV VR+ M G++K K G S++
Sbjct: 454 DHSSDYVLLANMYASAGQWNKVXRVRKSMHIRGVQKPKPGNSYI 497
>gi|317106766|dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
Length = 563
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 185/475 (38%), Positives = 279/475 (58%), Gaps = 10/475 (2%)
Query: 44 LYQIHAQI--QVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
L QIHA+I V + + + ++ +++ F LS N YAR I N + +N++I
Sbjct: 4 LRQIHARILTHVPPISSVSFLISKILSFAALSPFGNFDYARKIFSQIPNPGI-FAYNSVI 62
Query: 102 RGYAWSDRP-REAVWVFIDMKRRGI-KPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
RG ++ P +E + +F DM +G P FT FVLKAC+ I L EG Q+ A + +SG
Sbjct: 63 RGCLYTKIPSKEPIHLFKDMVGKGYPNPNTFTMAFVLKACSIIMALEEGKQIHAQILRSG 122
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
S Y ++LV FY C A KVFD++ ER++V W+ +++ + EA+ F
Sbjct: 123 FSSSPYVQSSLVNFYSKCEEITIARKVFDEITERNLVCWSAMVSGYARLGMINEALIMFR 182
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+M+ +G EPDE +++ VLSAC +G L +GKWVH + +R ++ +L TALI+MYAKCG
Sbjct: 183 EMQVVGIEPDEVSLVGVLSACAMVGALDIGKWVHAYIKKRMIHVDLELNTALINMYAKCG 242
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
+ AR +F M + WS+MI+GLA HG AE+AL +FS M+ + PN+VTF+G+L
Sbjct: 243 CIEKAREIFDEMRVKDSKAWSSMIVGLAIHGLAEDALNVFSRMEEAQAKPNHVTFIGILS 302
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
AC H G+V DG RY+ M + GI+P HY M D+L R G + EAY F + +P P+P
Sbjct: 303 ACAHGGLVSDGKRYWSSMLEL-GIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDP 360
Query: 400 IVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVR 459
++ R LL A + + + V +LLELEP ++N +I+AN YA V EKVS+VR
Sbjct: 361 VIWRTLLVAYTKNRMLQK---AEMVAGKLLELEPWKAENYIILANLYASVSQLEKVSHVR 417
Query: 460 RFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ MK G+K + G + +E+ G +H F +G S E I + L + L + + +
Sbjct: 418 KMMKENGIKALPGCTSIEVDGFVHNFVTGDWSHPEAEEIKKTLRDVALKILISGY 472
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 186/496 (37%), Positives = 278/496 (56%), Gaps = 14/496 (2%)
Query: 16 KPSNCNSDLLSKARQCLSFLKL-CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSS 74
KPS+ + L+S + FLK C S Q HA + + L ++ +L+ F LS
Sbjct: 3 KPSSKCTKLIS-----VDFLKTHCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSH 57
Query: 75 SKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPF 134
S +L YAR + N P N +IRGYA S P EAV ++ M RG+ +TYPF
Sbjct: 58 SGDLNYARKLFTQMQNPD-PFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPF 116
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
VL ACA + + G + V K+G SD++ N L++FY +C AC VFD+ R
Sbjct: 117 VLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRD 176
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDL-GFEPDETTMLVVLSACTELGNLSLGKWVH 253
VV+WN++I + +A +M L PDE TM+ ++ AC +LGNL GK++H
Sbjct: 177 VVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLH 236
Query: 254 LQLIERGTV-LNCQL--GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
E +NC L TAL+DMYAKCG++ A +F RM NV+TW+A+I GLA HG
Sbjct: 237 SYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHG 296
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
+ E+A+ LF M++ + P+ VTF+ +LCAC+HAG+V++G F M++ I+P HY
Sbjct: 297 HGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHY 356
Query: 371 HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLE 430
+ D+L RA + +A FI NMP + N ++ LL A + + ++ RR++E
Sbjct: 357 GCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACR---SGGHFDLAEKIGRRVIE 413
Query: 431 LEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYD 490
LEP V+++N YA V W+ +R+ MKN G++K G SW+EL G IH+F +G
Sbjct: 414 LEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDR 473
Query: 491 SQVELAGIYQILETLN 506
S ++ IY ++E +
Sbjct: 474 SHLQTEQIYAMIEEMT 489
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 183/516 (35%), Positives = 286/516 (55%), Gaps = 12/516 (2%)
Query: 1 MVRFPVPTTNHIF-----PPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSG 55
M+R V H+ PP+ + L K +C+S LK C + + Q HA+I G
Sbjct: 1 MIRTSVLHQTHVLVSREDPPQSPELSFKLGEK--ECVSLLKKCSNMEEFKQSHARILKLG 58
Query: 56 LQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVW 115
L D+ LV C LS ++ YA SI +++ +N ++RG+ EA+
Sbjct: 59 LFGDSFCASNLVATCALSDWGSMDYACSIF-RQMDELGSFQFNTMMRGHVKDMNTEEALI 117
Query: 116 VFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYG 175
+ +M RG+KP FTYP +LKACA + + EGMQV A++ K GL++DV+ N+L+ YG
Sbjct: 118 TYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLENDVFVQNSLISMYG 177
Query: 176 SCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF-EPDETTML 234
C C VF+ M ERSV SW+ +IT + + M + G+ +E+ ++
Sbjct: 178 KCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILV 237
Query: 235 VVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI 294
VLSACT LG L LG+ VH L+ + LN + T+LI+MY KCG++ LF +M +
Sbjct: 238 SVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGSLYKGMCLFQKMAKK 297
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYF 354
N ++S MI GLA HGY E L +F+ M + P+ + ++GVL AC+HAG+V++G + F
Sbjct: 298 NKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCF 357
Query: 355 HEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDA 414
+ M+ HGI+P HY M D++ RAG + EA I +MP +PN ++ R+LLSAS +H+
Sbjct: 358 NRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNN 417
Query: 415 KYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMS 474
G ++L +L+ + + + V+++N YA+ WE V+ R M + GL + G S
Sbjct: 418 LQ---AGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVAKTRTNMFSKGLSQRPGFS 474
Query: 475 WVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
VE+ +HRF S + +Y++L + +K
Sbjct: 475 LVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLK 510
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 186/477 (38%), Positives = 276/477 (57%), Gaps = 9/477 (1%)
Query: 34 FLKLCCSKKHLYQIHAQIQVSGL--QNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
++ C S + L QIHA++ + + + L +++ FC LS ++ YAR +
Sbjct: 63 LIRKCRSMRVLRQIHARLLTHAMPISSISFGLCKIIGFCALSPYGDIDYARKLFSQIQRP 122
Query: 92 SVPIPWNNLIRGYAWSDRP-REAVWVFIDMKRRGI-KPTEFTYPFVLKACAEISGLNEGM 149
++ WN++IRG + S P +E V +F M RRG P FT FVLKAC+ +S L EG
Sbjct: 123 NI-FSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQ 181
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
QV ANV KSG S + LV FY C A KVFD++ +R++V+W+ +I+
Sbjct: 182 QVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIG 241
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+ EA+G F M+ G PDE TM+ V+SAC G L GKWVH + ++ + +L T
Sbjct: 242 LVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQLIETDLELST 301
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
AL++MYAKCG + A+ +F M + WS+MI+GLA +G AE+ALE F M+ + + P
Sbjct: 302 ALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKP 361
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
N+VTF+GVL AC H+G+V +G RY+ M GI P Y M D+L RA +++A T
Sbjct: 362 NHVTFIGVLSACAHSGLVSEGRRYWSSMLEF-GIVPSMELYGCMVDLLCRASLVEDACTL 420
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
+ MP PNP++ R LL +K D V +RLLELEP ++N ++++N YA +
Sbjct: 421 VETMPISPNPVIWRTLLVGCK--KSKNLDK-SEVVAQRLLELEPHNAENYILLSNLYASM 477
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
WEK+S VR+ MK +G+K + G S +E+ G +H F G S E + +IL ++
Sbjct: 478 SQWEKMSQVRKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHPEAMEVREILRDIS 534
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 184/467 (39%), Positives = 271/467 (58%), Gaps = 9/467 (1%)
Query: 44 LYQIHAQIQVSGL--QNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
L QIHA++ + + + L +++ FC LS ++ YAR + ++ WN++I
Sbjct: 4 LRQIHARLLTHAMPISSISFGLCKIIGFCALSPYGDIDYARKLFSQIQRPNI-FSWNSMI 62
Query: 102 RGYAWSDRP-REAVWVFIDMKRRGI-KPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
RG + S P +E V +F M RRG P FT FVLKAC+ +S L EG QV ANV KSG
Sbjct: 63 RGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHANVLKSG 122
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
S + LV FY C A KVFD++ +R++V+W+ +I+ + EA+G F
Sbjct: 123 FGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFR 182
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
M+ G PDE TM+ V+SAC G L GKWVH + ++ + +L TAL++MYAKCG
Sbjct: 183 DMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKCG 242
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
+ A+ +F M + WS+MI+GLA +G AE+ALE F M+ + + PN+VTF+GVL
Sbjct: 243 CIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLS 302
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
AC H+G+V +G RY+ M GI P Y M D+L RA +++A T + MP PNP
Sbjct: 303 ACAHSGLVSEGRRYWSSMLEF-GIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNP 361
Query: 400 IVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVR 459
++ R LL +K D V +RLLELEP ++N ++++N YA + WEK+S VR
Sbjct: 362 VIWRTLLVGCK--KSKNLDK-SEVVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQVR 418
Query: 460 RFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
+ MK +G+K + G S +E+ G +H F G S E + +IL ++
Sbjct: 419 KKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHPEAMEVREILRDIS 465
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 187/515 (36%), Positives = 278/515 (53%), Gaps = 36/515 (6%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
L L C + K L QIHAQ +G+ +D + ++ F LS ++ YAR +
Sbjct: 39 LRHLSSCKTLKDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKP 98
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIK-PTEFTYPFVLKACAEISGLNEGMQ 150
+ I N LIR YA+S P +AV + +M + P T+P +LKAC+EI L G
Sbjct: 99 DIFIA-NTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEA 157
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD--------------------- 189
+ ++V K G S+V +N LV+ Y SC A VFD
Sbjct: 158 IHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGV 217
Query: 190 ----------MCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
M +R VVSW+V+I V+ E +G F M EP+E+ ++ LSA
Sbjct: 218 FKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSA 277
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C LG + G+W+ + + L +LGTALIDMY+KCG+V A +F +M+E NV W
Sbjct: 278 CAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAW 337
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
SAMI GLA +G ++AL LFS M+ + PN VTF+G+L AC+H+ +V++G +FH M
Sbjct: 338 SAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTS 397
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
++G+KP H+ M D+ RAG L +A T I +MPF+PN + ALL+A IH
Sbjct: 398 IYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHG---DTE 454
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
+G +V +RLLEL+P V+++N YA G W++V+ +RR M+ + K G S+++LG
Sbjct: 455 LGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLG 514
Query: 480 GSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+IH F +G S +L IY L ++ +K +
Sbjct: 515 DTIHEFVAGDSSHPQLEMIYAKLGEMSQELKAAGY 549
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 178/511 (34%), Positives = 271/511 (53%), Gaps = 35/511 (6%)
Query: 26 SKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
S A Q L L+ C + + L QIH Q+ +GL D +L+ FC +S +L YAR++
Sbjct: 16 SNAAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVF 75
Query: 86 CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL 145
+ + WN +IRGY+ S P EA+ ++ M + +T+PF+LKAC+ +S L
Sbjct: 76 -DRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSAL 134
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGS----------------------------- 176
E Q+ A++ K G S++YT N+L+ Y
Sbjct: 135 EETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGY 194
Query: 177 --CRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTML 234
C A ++F+ M ER+++SW +I+ CV EA+ F +M+ G + D ++
Sbjct: 195 TKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALV 254
Query: 235 VVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI 294
L AC +LG L GKW+H + + ++ LG LIDMYAKCG + A +F +MEE
Sbjct: 255 STLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEK 314
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYF 354
V W+AMI G A HG EALE F M+ + + PN +TF G+L AC+HAG+V + F
Sbjct: 315 GVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLF 374
Query: 355 HEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDA 414
ME +HG KP HY M D+L RAG LKEA I NMP +PN + ALL+A IH
Sbjct: 375 ESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHG- 433
Query: 415 KYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMS 474
+G ++ + L++++P + +A+ +A G W + + VRR MK G+ K+ G S
Sbjct: 434 --NLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCS 491
Query: 475 WVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+ + G+ H F +G +S ++ I +LE +
Sbjct: 492 VISVNGTAHEFLAGDESHPQIKEIDHMLEQI 522
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 178/506 (35%), Positives = 274/506 (54%), Gaps = 13/506 (2%)
Query: 14 PPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLS 73
PP C + S LS L C S + L Q+ A + L +D +L + + FC+L+
Sbjct: 6 PPVTPMCPPNSNSNTTHPLSLLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLN 65
Query: 74 -SSKNLTYARSILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPT 128
++ ++ +A + D +P P +N + RGYA +D P A +F + G+ P
Sbjct: 66 PTTTSMQHAHHLF-----DQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPD 120
Query: 129 EFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD 188
++T+P +LKACA L EG Q+ K GL +VY L+ Y +C A +VFD
Sbjct: 121 DYTFPSLLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFD 180
Query: 189 DMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSL 248
+ E VV++N +IT EA+ F +++ +P + TML VLS+C LG L L
Sbjct: 181 KIWEPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDL 240
Query: 249 GKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ 308
GKW+H + + G ++ TALIDMYAKCG++ A +F M + WSAMI+ A
Sbjct: 241 GKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAI 300
Query: 309 HGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRI 368
HG+ +A+ LF M+ + P+ +TFLG+L AC+H G+VE+G+ YF+ M +G+ P
Sbjct: 301 HGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIK 360
Query: 369 HYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRL 428
HY M D+L RAG L+EAY FI+ +P +P PI+ R LLSA H +G V ++
Sbjct: 361 HYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHG---NVELGKRVIEQI 417
Query: 429 LELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
EL+ + +I++N A G WE V+ VR+ M G+ K+ G S VE+ +H F+SG
Sbjct: 418 FELDDSHGGDYIILSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSG 477
Query: 489 YDSQVELAGIYQILETLNLHMKVLNF 514
++Q L+ L +K++ +
Sbjct: 478 DGVHSVSTKLHQALDELVKELKLVGY 503
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 180/512 (35%), Positives = 274/512 (53%), Gaps = 24/512 (4%)
Query: 7 PTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKEL 66
P T + PP S LS + C S + L QI A + QN+ +L +L
Sbjct: 26 PNTAALEPPSSS------------ILSLIPKCTSLRELKQIQA-YTIKTHQNNPTVLTKL 72
Query: 67 VRFCTLSSSKNLTYARSILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKR 122
+ FCT N T A + + D +P P +N + RGYA D P A+ + +
Sbjct: 73 INFCT----SNPTIASMDHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLC 128
Query: 123 RGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRD 182
G+ P ++T+ +LKACA + L EG Q+ K G+ ++Y L+ Y +C
Sbjct: 129 SGLLPDDYTFSSLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDA 188
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
A +VFD + E VV++N IIT C N EA+ F ++++ G +P + TMLV LS+C
Sbjct: 189 ARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCAL 248
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
LG L LG+W+H + + G ++ TALIDMYAKCG++ A +F M + WSAM
Sbjct: 249 LGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAM 308
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
I+ A HG+ +A+ + MK + + P+ +TFLG+L AC+H G+VE+GY YFH M H +G
Sbjct: 309 IVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYG 368
Query: 363 IKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGN 422
I P HY M D+L RAG L+EA FI +P +P PI+ R LLS+ S H +
Sbjct: 369 IVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHG---NVEMAK 425
Query: 423 EVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSI 482
V +R+ EL+ + VI++N A G W+ V+++R+ M + G K+ G S +E+ +
Sbjct: 426 LVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKGALKVPGCSSIEVNNVV 485
Query: 483 HRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
H F+SG ++ L+ L +K+ +
Sbjct: 486 HEFFSGDGVHSTSTILHHALDELVKELKLAGY 517
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 177/511 (34%), Positives = 270/511 (52%), Gaps = 35/511 (6%)
Query: 26 SKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
S A Q L L+ C + + L QIH Q+ +GL D +L+ FC +S +L YAR++
Sbjct: 16 SNAAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVF 75
Query: 86 CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL 145
+ + WN +IRGY+ S P EA+ ++ M + +T+PF+LKAC+ +S
Sbjct: 76 -DRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSAS 134
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGS----------------------------- 176
E Q+ A++ K G S++YT N+L+ Y
Sbjct: 135 EETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGY 194
Query: 177 --CRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTML 234
C A ++F+ M ER+++SW +I+ CV EA+ F +M+ G + D ++
Sbjct: 195 TKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALV 254
Query: 235 VVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI 294
L AC +LG L GKW+H + + ++ LG LIDMYAKCG + A +F +MEE
Sbjct: 255 STLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEK 314
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYF 354
V W+AMI G A HG EALE F M+ + + PN +TF G+L AC+HAG+V + F
Sbjct: 315 GVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLF 374
Query: 355 HEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDA 414
ME +HG KP HY M D+L RAG LKEA I NMP +PN + ALL+A IH
Sbjct: 375 ESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHG- 433
Query: 415 KYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMS 474
+G ++ + L++++P + +A+ +A G W + + VRR MK G+ K+ G S
Sbjct: 434 --NLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCS 491
Query: 475 WVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+ + G+ H F +G +S ++ I +LE +
Sbjct: 492 VISVNGTAHEFLAGDESHPQIKEIDHMLEQI 522
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 180/485 (37%), Positives = 266/485 (54%), Gaps = 6/485 (1%)
Query: 6 VPTTNHIFPPKPSNCNS--DLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQIL 63
+PT KPS+ S + + LS L C S L QI A + LQ+D +L
Sbjct: 6 IPTCQFTLT-KPSSAFSKNEFVINQLHPLSLLSKCTSLNELKQIQAYTIKTNLQSDISVL 64
Query: 64 KELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRR 123
+L+ FCTL+ + + L + + D I +N + RGYA S+ P A +F ++
Sbjct: 65 TKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCS 124
Query: 124 GIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDA 183
G+ P ++T+ +LKACA L EGM + K GL+ ++Y L+ Y C A
Sbjct: 125 GLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAA 184
Query: 184 CKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
VFD+M + +VS+N IIT + EA+ F +++ EP + TML V+ +C L
Sbjct: 185 RGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALL 244
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
G L LGKW+H + ++G ++ TALIDM+AKCG++ A +F M + WSAMI
Sbjct: 245 GALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMI 304
Query: 304 LGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
+ A HG +A+ +F MK + P+ +TFLG+L AC+HAG+VE G YF+ M +GI
Sbjct: 305 VAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGI 364
Query: 364 KPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNE 423
P HY M D+L RAGHL EAY F+ + + PI+ R LLSA S H +
Sbjct: 365 TPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHG---NVEMAKR 421
Query: 424 VRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIH 483
V R+ EL+ + VI++N YA VG WE V+++R+ MK+ G+ K+ G S VE+ +H
Sbjct: 422 VIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVH 481
Query: 484 RFYSG 488
F+SG
Sbjct: 482 EFFSG 486
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 175/487 (35%), Positives = 270/487 (55%), Gaps = 11/487 (2%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LS L C S K L QI A + LQND QIL +L+ CT +N T A + + +
Sbjct: 30 LSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCT----QNPTTASMDYAHQLFE 85
Query: 92 SVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
++P P +N++ RGY+ S+ P +A+ +FI + P ++T+P +LKAC +
Sbjct: 86 AIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQ 145
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G Q+ K GL+ + Y L+ Y C A +VFD++ E VVS+N IIT
Sbjct: 146 GKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYAR 205
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
+ EA+ F +++ +P++ T+L VLS+C LG L LGKW+H + + G ++
Sbjct: 206 SSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKV 265
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
TALIDMYAKCG++ A +F M + WSAMI+ A HG ++ + +F M + +
Sbjct: 266 NTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKV 325
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
P+ +TFLG+L AC+H G+V++G+RYF+ M V+GI P HY M D+L RAG L EAY
Sbjct: 326 QPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAY 385
Query: 388 TFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYA 447
FI +P +P PI+ R LLS+ S H + +V ++LEL+ + VI++N A
Sbjct: 386 KFIDELPIKPTPILWRTLLSSCSSHG---NLELAKQVMNQILELDDSHGGDYVILSNLCA 442
Query: 448 EVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNL 507
G WE V +R+ M + G K+ G S +E+ +H F+SG +++ L+ L
Sbjct: 443 RAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDELVK 502
Query: 508 HMKVLNF 514
+K + +
Sbjct: 503 ELKSVGY 509
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 174/479 (36%), Positives = 265/479 (55%), Gaps = 4/479 (0%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
++ +K C L I A + + L D + +L+ ++ S ++ YA I +
Sbjct: 11 VAAIKRCTRVGDLKAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHHP 70
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
++ + WN +IRGY+ SD P A+ ++ DM GI P +T+ FVLKAC ++ L EG ++
Sbjct: 71 NLFM-WNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQEL 129
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
+ + K GLD + N L++ Y +C AC +FD+M E SW+ +++ +N
Sbjct: 130 HSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQA 189
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
EA+ F +M+ D T+ V+ C +LG L LGKWVH + + G ++ LGTAL
Sbjct: 190 VEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTAL 249
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
+ MY+KCG++ A +F M E +V WS MI G A HG+ E+AL+LF MK S PN
Sbjct: 250 VGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNC 309
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
VTF VL AC+H+G+VE G++ F M + I P HY M D+ RAG + A+ FI
Sbjct: 310 VTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQ 369
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGM 451
MP +PN ++ R LL A H Y+D +G + R++L+L+P +N V+V+N YA +G
Sbjct: 370 TMPIEPNVVLWRTLLGACKTHG--YKD-LGEHISRKILKLDPSSPENYVLVSNVYASLGR 426
Query: 452 WEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
W V VR MK+ KK G S +E+ +H+F G +S E IY +L + +K
Sbjct: 427 WSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQMARKLK 485
>gi|225451435|ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 474
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 178/440 (40%), Positives = 255/440 (57%), Gaps = 4/440 (0%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW 97
C S L QIHAQ+ VS +D L+ FC LS S +L+YA + N + W
Sbjct: 36 CTSMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGDLSYALRLF-NNTQEPNSFMW 94
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N LIR +A S P EA+ +++DM+R + P + T+PF+LKAC+ L +QV +V K
Sbjct: 95 NTLIRAHASSLNPSEALLLYVDMRRLDVIPGKHTFPFLLKACSNFQSLQSCIQVHTHVLK 154
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
GLD +++ N LVR Y R+A +VFD++ ERS+ W +I+ +N EA+
Sbjct: 155 FGLDLNLHVVNGLVRAYSVSCDVRNARRVFDEVSERSLSIWTTMISGYAQNYCSNEALEL 214
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
F +M G EP+ T+ VLSAC + G L LG+ +H+ + E+G + LGTAL+ MYAK
Sbjct: 215 FDQMIVEGLEPNGATLASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALVHMYAK 274
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
GA+ A+ LF + E N TW+AMI GLA HG+A+EAL+ F ++ I PN +TF+GV
Sbjct: 275 NGAILMAQKLFDTISERNTATWNAMICGLAVHGHAKEALDRFWKLEKEQIVPNDITFVGV 334
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
L AC HAG++ G + FH M+ V+GI+P HY M D+L R G L EA I M ++
Sbjct: 335 LSACCHAGLLSVGRKIFHLMKRVYGIEPKIEHYGCMVDLLGRGGELLEAEELIKGMAWKA 394
Query: 398 NPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSN 457
+ ++L ALL + H + V + +L LEP V+++N YAE G WE V
Sbjct: 395 DVVILGALLGSCKNHG---NIEIAERVVKEILVLEPHNHGVYVVLSNMYAEAGRWEDVLR 451
Query: 458 VRRFMKNVGLKKMKGMSWVE 477
+R+ MK+ LKK G S V+
Sbjct: 452 LRKVMKSGNLKKTPGWSLVD 471
>gi|147769957|emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]
Length = 476
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 178/440 (40%), Positives = 255/440 (57%), Gaps = 4/440 (0%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW 97
C S L QIHAQ+ VS +D L+ FC LS S +L+YA + N + W
Sbjct: 38 CTSMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGDLSYALRLF-NNTQEPNSFMW 96
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N LIR +A S P EA+ +++DM+R + P + T+PF+LKAC+ L +QV +V K
Sbjct: 97 NTLIRAHASSLNPSEALLLYVDMRRLDVIPGKHTFPFLLKACSNFQSLQSCIQVHTHVLK 156
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
GLD +++ N LVR Y R+A +VFD++ ERS+ W +I+ +N EA+
Sbjct: 157 FGLDLNLHVVNGLVRAYSVSCDVRNARRVFDEVSERSLSIWTTMISGYAQNYCSNEALEL 216
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
F +M G EP+ T+ VLSAC + G L LG+ +H+ + E+G + LGTAL+ MYAK
Sbjct: 217 FDQMIVEGLEPNGATLASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALVHMYAK 276
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
GA+ A+ LF + E N TW+AMI GLA HG+A+EAL+ F ++ I PN +TF+GV
Sbjct: 277 NGAILMAQKLFDXISERNTATWNAMICGLAVHGHAKEALDRFWKLEKEQIVPNDITFVGV 336
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
L AC HAG++ G + FH M+ V+GI+P HY M D+L R G L EA I M ++
Sbjct: 337 LSACCHAGLLSVGRKIFHLMKRVYGIEPKIEHYGCMVDLLGRGGELLEAEELIKGMAWKA 396
Query: 398 NPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSN 457
+ ++L ALL + H + V + +L LEP V+++N YAE G WE V
Sbjct: 397 DVVILGALLGSCKNHG---NIEIAERVVKEILVLEPHNHGVYVVLSNMYAEAGRWEDVLR 453
Query: 458 VRRFMKNVGLKKMKGMSWVE 477
+R+ MK+ LKK G S V+
Sbjct: 454 LRKVMKSGNLKKTPGWSLVD 473
>gi|225424875|ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Vitis vinifera]
Length = 607
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 188/492 (38%), Positives = 272/492 (55%), Gaps = 11/492 (2%)
Query: 21 NSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTY 80
NSD + R+ L FL C L Q+HAQ + + R SS +L Y
Sbjct: 19 NSDSFTHHRRLLLFLNSCTCISQLKQLHAQTIRTTSSHHPNTFFLYSRILHFSSLHDLRY 78
Query: 81 ARSILCNYVNDSVPIPWNNLIRGYAWS-DRPREAVWVFIDMKRRG-IKPTEFTYPFVLKA 138
A + + + + WN LIR A S DR + A+ ++ M +G + + T+PFVLKA
Sbjct: 79 AFRVF-HQIENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFVLKA 137
Query: 139 CAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSW 198
CA + L+EG Q+ A + K G DSDVY NN+LV FY +C R A VFD M ERS+VSW
Sbjct: 138 CAYLFALSEGEQIHAQILKLGFDSDVYINNSLVHFYATCDRLDFAKGVFDRMSERSLVSW 197
Query: 199 NVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
NV+I V A+ F +M+ FEPD T+ + +AC +G+LSLG W H+ L++
Sbjct: 198 NVVIDAFVRFGEFDAALNLFGEMQKF-FEPDGYTIQSIANACAGMGSLSLGMWAHVFLLK 256
Query: 259 R---GTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEA 315
+ V + L T+L+DMY KCG++ A LF RM + +V +W++MILG + HG A
Sbjct: 257 KFDADRVNDVLLNTSLVDMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAA 316
Query: 316 LELFSNM-KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMA 374
LE F M + + PN +TF+GVL ACNH G+V +G RYF M + IKP HY +
Sbjct: 317 LEYFGCMVRTEKLMPNAITFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLV 376
Query: 375 DILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPR 434
D+LARAG + EA + NMP +P+ ++ R+LL A +A + + E+ RR+LE E
Sbjct: 377 DLLARAGLIDEALDVVSNMPMRPDLVIWRSLLDACCKQNAGVE--LSEEMARRVLEAEGG 434
Query: 435 GSQNL-VIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQV 493
+ V+++ YA W V VR+ M + G+ K G S +E+ G H F++G S
Sbjct: 435 VCSGVYVLLSRVYASASRWNDVGMVRKLMTDKGVVKEPGCSSIEIDGVAHEFFAGDTSHP 494
Query: 494 ELAGIYQILETL 505
+ IY L+ +
Sbjct: 495 QTEEIYSALDVI 506
>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 558
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 173/468 (36%), Positives = 272/468 (58%), Gaps = 17/468 (3%)
Query: 43 HLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP----WN 98
++Y++H I S QND L+ L+ C ++ ++L+YAR YV +P P +N
Sbjct: 3 NVYRLHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLSYAR-----YVFSRIPSPDTIAYN 57
Query: 99 NLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
+IR ++ P +++ F M+ GI FT+PFVLKAC S L + + + + K
Sbjct: 58 TIIRSHS-RFFPSHSLFYFFSMRSNGIPLDNFTFPFVLKAC---SRLQINLHLHSLIVKY 113
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
GLDSD++ N L+ YG C A KVFD+M ER VSW+ +I + N + EA+ F
Sbjct: 114 GLDSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLF 173
Query: 219 VKMK-DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
KM+ + PDE TML V+SA + LG+L LG+WV + G ++ LGTALIDM+++
Sbjct: 174 EKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGLGVSVALGTALIDMFSR 233
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CG++ + ++F +M NV TW+A+I GL HG + EAL +F +M+ S + P+YVTF GV
Sbjct: 234 CGSIDESIVVFEKMAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKSGVQPDYVTFSGV 293
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
L AC+H G+V++G+ F + V+ + P+ HY M DIL RAG L EAY F+ MP +P
Sbjct: 294 LVACSHGGLVKEGWDIFESIRKVYRMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKP 353
Query: 398 NPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSN 457
N I+ R LL A H+ G+ +V+ ++ ++ + +LV+++N Y G W + ++
Sbjct: 354 NSIIWRTLLGACVNHN---NLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKAS 410
Query: 458 VRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+R M+ + K G S + + +IH F SG +S + I + L ++
Sbjct: 411 IRSKMREKRIGKEPGCSSINVDQTIHEFVSGDNSHPQSEDITKFLSSI 458
>gi|224133278|ref|XP_002321528.1| predicted protein [Populus trichocarpa]
gi|222868524|gb|EEF05655.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 168/429 (39%), Positives = 253/429 (58%), Gaps = 5/429 (1%)
Query: 42 KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
K L QIHA++ G + + ++ +++ FC + ++ YA S+ + D +N +I
Sbjct: 2 KDLKQIHARVIQLGFEQNRFVVGKVIVFCAAAEHGDMNYAVSVF-EKIGDPDAFIFNTMI 60
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
RG+ ++ PR+A + M+ RG+ FT+ F+LK C ++ + G + + K GL+
Sbjct: 61 RGFGKANDPRKAFDYYKRMQERGLVSDSFTFSFLLKVCGQLGLVLLGRLMHCSTLKRGLN 120
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
S V+ N LV YG+ + + ++F+++ +V+WN+II V EA+ F +M
Sbjct: 121 SHVFVRNTLVHMYGTFKDIEASRQLFEEIPNPELVAWNIIIDCHVSCGKFNEALEMFSRM 180
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
G EPDE T +V+LSAC+ LG L G+WVH + G ++ +L+DMYAKCGA+
Sbjct: 181 LKFGIEPDEATFVVILSACSALGALDFGRWVHSCISNIGHGCITEVNNSLLDMYAKCGAL 240
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI-SPNYVTFLGVLCA 340
A +F+ M + N TW+ MILGLA HGYA EAL LFSNM + +P+ +TFL VL A
Sbjct: 241 QEAFEIFNGMNKKNTVTWNTMILGLASHGYANEALALFSNMLEQKLWAPDDITFLVVLSA 300
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPI 400
C+H GMV+ G+R+F M+ + I+P HY M DIL RAG ++EAY I NMP Q N I
Sbjct: 301 CSHGGMVDKGWRFFDIMKKEYHIQPTIKHYGCMVDILGRAGFVEEAYRLISNMPMQCNAI 360
Query: 401 VLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRR 460
V R LL+A +H +G +VR++LLELEP S + V++AN YA G W + VR+
Sbjct: 361 VWRTLLAACRLHG---NVELGKQVRKQLLELEPDHSSDYVLLANTYASAGRWNEAMRVRK 417
Query: 461 FMKNVGLKK 469
M G++K
Sbjct: 418 TMHKRGVQK 426
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 209/562 (37%), Positives = 277/562 (49%), Gaps = 54/562 (9%)
Query: 1 MVRFPVPTTNHIFPPKPSNCNSDLLS----KARQ--------CLSFLKLCCSKKHLYQIH 48
MV+F T I P K S C S RQ +S L C + Q+H
Sbjct: 1 MVKFCTKTCLFILP-KTSYCQLQTQSFIPFSVRQEQKILESRLVSVLHGCTHINQVKQVH 59
Query: 49 AQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSD 108
A I GL+ +L +L+R T Y R + V P W LIRGYA
Sbjct: 60 AHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVF-QQVEYPNPFLWTALIRGYALQG 118
Query: 109 RPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA-NVTKSGLDSDVYTN 167
E+V ++ M+R+GI P FT+ +LKAC+ +N G QV + G SD+Y
Sbjct: 119 PFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVG 178
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC--VENL---------------- 209
N L+ Y C +VFD+M +R V+SW +I V N+
Sbjct: 179 NTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMV 238
Query: 210 -WLGEAVGY------------FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
W GY F +M+ G + DE T++ V+SAC +LG WV +
Sbjct: 239 AWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVR-DV 297
Query: 257 IER---GTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
E+ G N +G+ALIDMYAKCG+V A +F RMEE NV+++S+MI+G A HG A
Sbjct: 298 AEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAG 357
Query: 314 EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
A+ELF M + I PN VTF+GVL AC+HAGMVE G + F ME HG+ P HY M
Sbjct: 358 AAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACM 417
Query: 374 ADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP 433
D+L RAG L+EA + MP P+ V ALL A IH + L ELEP
Sbjct: 418 VDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHG---NPDMAQIAASHLFELEP 474
Query: 434 RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVE-LGGSIHRFYSGYDSQ 492
G N ++++N YA G W+ VS VR+ M+ GLKK G SWVE G IH F++G S
Sbjct: 475 NGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEFFAGDMSH 534
Query: 493 VELAGIYQILETLNLHMKVLNF 514
+ I Q LE L +K L +
Sbjct: 535 PKSREIKQALEDLLDRLKYLGY 556
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 173/513 (33%), Positives = 276/513 (53%), Gaps = 37/513 (7%)
Query: 35 LKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKN--LTYARSILCNYVNDS 92
L+ C HL IHA + + + D L+ FC SS + YA I N +
Sbjct: 24 LETCSDLTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPN 83
Query: 93 VPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQ 152
+ I +N +IRG++ S P +A ++ +R+G+ P T+PF++K+C ++ ++ G Q
Sbjct: 84 LFI-FNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAH 142
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGS-------------------------------CRRKR 181
++ K G + DVY N+LV Y + C
Sbjct: 143 GHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVE 202
Query: 182 DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
A K+FD M E+++V+W+ +I+ +N +AV F ++ G +ET M+ V+S+C
Sbjct: 203 SARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCA 262
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
LG L LG+ H +++ G LN LGTAL+DMYA+CG++ A +F + E + +W+A
Sbjct: 263 HLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTA 322
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
+I GLA HGY+E +L+ F+ M + ++P +TF VL AC+H G+VE G++ F M+ H
Sbjct: 323 LIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDH 382
Query: 362 GIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVG 421
++P HY M D+L RAG L+EA F++ MP +PN V ALL A IH +G
Sbjct: 383 RVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHK---NAEIG 439
Query: 422 NEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGS 481
V + L++L P+ S V+++N YA WEKV+ +R+ MK GLKK G S +EL G
Sbjct: 440 ERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGR 499
Query: 482 IHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+H+F G S E+ I ++ E + + ++ +
Sbjct: 500 VHKFTIGDSSHPEMDKIERMWEEILMRIRAAGY 532
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 131/315 (41%), Gaps = 36/315 (11%)
Query: 34 FLKLCCSKKHLY----QIHAQIQVSGLQNDAQILKELVR-FCTLSSSK--NLTYARSILC 86
FL C+K H Q H I G + D + LV + T ++ L + R
Sbjct: 124 FLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYV 183
Query: 87 NYVN---------------------DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMK 121
+ V+ D +P + W+ +I GYA ++ +AV +F ++
Sbjct: 184 DVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQ 243
Query: 122 RRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKR 181
+G++ E V+ +CA + L G + V K+G+ ++ LV Y C
Sbjct: 244 SQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSID 303
Query: 182 DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
A VF+D+ ER +SW +I + + ++ YF M + G P + T VLSAC+
Sbjct: 304 KAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACS 363
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLG--TALIDMYAKCGAVGCARLLFSRME-EINVWT 298
G + G + + ++R + +L ++D+ + G + A +M + N
Sbjct: 364 HGGLVERGFQI-FESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPV 422
Query: 299 WSAMILGLAQHGYAE 313
W A++ H AE
Sbjct: 423 WGALLGACRIHKNAE 437
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 182/502 (36%), Positives = 265/502 (52%), Gaps = 37/502 (7%)
Query: 44 LYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRG 103
L Q+HA + + + L + C +SS +YA+ I ++ S WN +R
Sbjct: 31 LKQLHAHLLKTNSPLSSLPLSRVASVCAFNSS--FSYAKLIF-QLLDASEVTHWNTCLRS 87
Query: 104 YAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD 163
+A D P +A+ +F ++ I P +T FVLKAC+ + + G V V K GL S+
Sbjct: 88 FAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSN 147
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE---------------- 207
++ N +V Y C A KVFD M +R V++WN++I V+
Sbjct: 148 MFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPE 207
Query: 208 ---NLWLG------------EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
W EA+ F++M+D G P+E T++ VL AC ++GNL LG+ +
Sbjct: 208 RNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRI 267
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H G N ++ LIDMY KCG + A +F MEE V +WSAMI GLA HG A
Sbjct: 268 HDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRA 327
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
E+AL LF+ M N+ + PN VTF+G+L AC+H GMVE G +YF M +GI P HY
Sbjct: 328 EDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGC 387
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELE 432
M D+ +RAG L+EA+ FIMNMP PN +V ALL +H + E R L +L+
Sbjct: 388 MVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHK---NIKLAEEATRHLSKLD 444
Query: 433 PRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQ 492
P V+++N YAE G WE V+ VR+ M++ G+KK G S + + G ++ F +G D+
Sbjct: 445 PLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTH 504
Query: 493 VELAGIYQILETLNLHMKVLNF 514
+ I+Q E L MK+ +
Sbjct: 505 PQTEEIFQTWEKLLQRMKLKGY 526
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/466 (36%), Positives = 264/466 (56%), Gaps = 5/466 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q HA+I GL D+ LV C LS ++ YA SI +++ +N ++RG+
Sbjct: 6 QSHARILKXGLFXDSFCASNLVATCALSDWGSMDYACSIF-RQMDEPGSFZFNTMMRGHV 64
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
EA+ + +M RG+KP FTYP +LKACA + + EGMQV A++ K GL++DV+
Sbjct: 65 KDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLENDVF 124
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N+L+ YG C C VF+ M ERSV SW+ +IT + + M + G
Sbjct: 125 VQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEG 184
Query: 226 F-EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCA 284
+ +E+ ++ VLSACT LG L LG+ VH L+ + LN + T+LI+MY KCG +
Sbjct: 185 YWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGXLYKG 244
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA 344
LF +M + N ++S MI GLA HGY E L +F+ M + P+ + ++GVL AC+HA
Sbjct: 245 MCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHA 304
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRA 404
G+V++G + F+ M+ HGI+P HY M D++ RAG + EA I +MP +PN ++ R+
Sbjct: 305 GLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRS 364
Query: 405 LLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKN 464
LLSAS +H+ G ++L +L+ + + + V+++N YA+ WE V+ R M +
Sbjct: 365 LLSASKVHNNLQ---AGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVARTRTNMFS 421
Query: 465 VGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
GL + G S VE+ +HRF S + +Y++L + +K
Sbjct: 422 KGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLK 467
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 187/526 (35%), Positives = 280/526 (53%), Gaps = 62/526 (11%)
Query: 35 LKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP 94
+K C S + L Q+HA + +G +D I E++R S +++ YA S+ D +P
Sbjct: 22 IKACKSMRELKQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVF-----DQLP 76
Query: 95 ----IPWNNLIRGYAWS-DRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEISGLNEG 148
WN +IR A + DR +A+ VF M ++P +FT+P VLKACA ++ L EG
Sbjct: 77 ERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEG 136
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDA------------------------- 183
QV + K GL D + NL+R Y C DA
Sbjct: 137 KQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGRE 196
Query: 184 -----CKV-----------------FDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
C V FD M +RSVVSWNV+I+ +N + EA+ F +M
Sbjct: 197 FNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRM 256
Query: 222 KDLG-FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
+G P+ T++ VL A + LG L LGKWVHL + ++ LG+AL+DMYAKCG+
Sbjct: 257 MQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGS 316
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
+ A +F R+ + NV TW+A+I GLA HG A + S M+ ISP+ VT++ +L A
Sbjct: 317 IEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILSA 376
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPI 400
C+HAG+V++G +F++M + G+KP HY M D+L RAG+L+EA I+NMP +P+ +
Sbjct: 377 CSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDV 436
Query: 401 VLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRR 460
+ +ALL AS +H +G L+++ P S V ++N YA G W+ V+ VR
Sbjct: 437 IWKALLGASKMHK---NIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRL 493
Query: 461 FMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
MK++ ++K G SW+E+ G IH F DS I+ +LE ++
Sbjct: 494 MMKDMDIRKDPGCSWIEIDGVIHEFLVEDDSHSRAKDIHSMLEEIS 539
>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 558
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/468 (36%), Positives = 271/468 (57%), Gaps = 17/468 (3%)
Query: 43 HLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP----WN 98
++Y++H I S QND L+ L+ C ++ ++L+YAR YV +P P +N
Sbjct: 3 NVYRLHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLSYAR-----YVFSRIPSPDTIAYN 57
Query: 99 NLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
+IR ++ P ++ F M+ GI FT+PFVLKAC S L + + + + K
Sbjct: 58 TIIRSHS-RFFPSHSLSYFFSMRSNGIPLDNFTFPFVLKAC---SRLQINLHLHSLIVKY 113
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
GL SD++ N L+ YG C A KVFD+M ER VSW+ +I + N + EA+ F
Sbjct: 114 GLGSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLF 173
Query: 219 VKMK-DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
KM+ + PDE TML V+SA + LG+L LG+WV + G ++ LGTALIDM+++
Sbjct: 174 EKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGFGVSVALGTALIDMFSR 233
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CG++ + ++F +M NV TW+A+I GL HG + EAL +F +M+ S + P+YVTF GV
Sbjct: 234 CGSIDESIVVFEKMAVRNVLTWTALINGLGIHGRSMEALAMFHSMRKSGVQPDYVTFSGV 293
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
L AC+H G+V++G+ F + V+G+ P+ HY M DIL RAG L EAY F+ MP +P
Sbjct: 294 LVACSHGGLVKEGWDIFESIRKVYGMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKP 353
Query: 398 NPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSN 457
N I+ R LL A H+ G+ +V+ ++ ++ + +LV+++N Y G W + ++
Sbjct: 354 NSIIWRTLLGACVNHN---NLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKAS 410
Query: 458 VRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+R M+ + K G S + + +IH F SG +S + I + L ++
Sbjct: 411 IRSKMREKRIGKEPGCSSINVDQTIHEFVSGDNSHPQSEDITKFLSSI 458
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/480 (35%), Positives = 260/480 (54%), Gaps = 21/480 (4%)
Query: 26 SKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
S A Q L L+ C + + L QIH Q+ +GL D +L+ FC +S +L YAR++
Sbjct: 16 SNAAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVF 75
Query: 86 CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL 145
+ + WN +IRGY+ S P EA+ ++ M + +T+PF+LKAC+ +S L
Sbjct: 76 DRIFRPNTFM-WNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSAL 134
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
E Q+ A++ K G S++YT N+L+ Y + A +FD + +R
Sbjct: 135 EETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT---------- 184
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
EA+ F +M+ G + D ++ L AC +LG L GKW+H + + ++
Sbjct: 185 -------EALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDP 237
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
LG LIDMYAKCG + A +F +MEE V W+AMI G A HG EALE F M+ +
Sbjct: 238 ILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTA 297
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
+ PN +TF G+L AC+HAG+V + F ME +HG KP HY M D+L RAG LKE
Sbjct: 298 GVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKE 357
Query: 386 AYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANK 445
A I NMP +PN + ALL+A IH +G ++ + L++++P + +A+
Sbjct: 358 AEELIENMPVKPNAAIWGALLNACHIHG---NLELGKQIGKILIQVDPGHGGRYIHLASI 414
Query: 446 YAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+A G W + + VRR MK G+ K+ G S + + G+ H F +G +S ++ I +LE +
Sbjct: 415 HAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQI 474
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 181/489 (37%), Positives = 275/489 (56%), Gaps = 14/489 (2%)
Query: 29 RQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLT-YARSILCN 87
+ CL+ L+ C + L QIH I GL N+ +L +F ++SS + T YA S L +
Sbjct: 30 QNCLALLQACNALPKLTQIHTHILKLGLHNNPLVL---TKFASISSLIHATDYAASFLFS 86
Query: 88 YVNDSV---PIPWNNLIRGYAWSDRPRE-AVWVFIDMKRRGIKPTEFTYPFVLKACAEIS 143
D+ +N LIR YA + ++ A+ ++ M I P +FTYPFVLKACA +
Sbjct: 87 AEADTRLYDAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLE 146
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRK-RDACKVFDDMCERSVVSWNVII 202
LN G V +V K G D D++ N +V Y C A KVFD+M + V+W+ +I
Sbjct: 147 VLNLGQTVHGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMI 206
Query: 203 TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV 262
EAV F +M+ PDE TM+ +LSACT+LG L LGKW+ IER +
Sbjct: 207 GGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIE-AYIERHEI 265
Query: 263 LN-CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSN 321
++ ALIDM+AKCG + A LF M E + +W+++I+G+A HG +EA LF
Sbjct: 266 HKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEE 325
Query: 322 MKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAG 381
M +S ++P+ V F+G+L AC+H+G+VE G YF M + + P HY M D+ R G
Sbjct: 326 MTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTG 385
Query: 382 HLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVI 441
+KEA F+ NMP +PNP++LR L+SA H + +G ++ + L++ EP N V+
Sbjct: 386 LVKEALEFVRNMPIEPNPVILRTLVSACRGHG---EFKLGEKITKLLMKHEPLHESNYVL 442
Query: 442 VANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQI 501
++N YA+ WEK + +R M+ G+KK+ G + +E+ I+ F +G S + IY++
Sbjct: 443 LSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQHKEIYEM 502
Query: 502 LETLNLHMK 510
++ + MK
Sbjct: 503 VDEMGREMK 511
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/497 (35%), Positives = 281/497 (56%), Gaps = 9/497 (1%)
Query: 24 LLSKARQCLSFLKL--CCSKKHLYQIHAQIQVSGLQ-NDAQILKELVRF-CTLSSSKNLT 79
LL +C++ L+ S L QIHA +G+ +DA++ K L+ + +L S ++
Sbjct: 11 LLPMVEKCINLLQTYGVSSLTKLRQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMS 70
Query: 80 YARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKA 138
YA + WN LIRGYA AV ++ +M+ G ++P TYPF+LKA
Sbjct: 71 YAHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKA 130
Query: 139 CAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSW 198
+++ + G + + V +SG S +Y N+L+ Y +C A KVFD M E+ +V+W
Sbjct: 131 VGKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAW 190
Query: 199 NVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
N +I EN EA+ + +M G +PD T++ +LSAC ++G L+LGK H+ +I+
Sbjct: 191 NSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIK 250
Query: 259 RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALEL 318
G N L+D+YA+CG V A+ LF M + N +W+++I+GLA +G +EA+EL
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIEL 310
Query: 319 FSNMKNSS-ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL 377
F NM++ + P +TF+G+L AC+H GMV++G+ YF M + I+P H+ M D+L
Sbjct: 311 FKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLL 370
Query: 378 ARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
ARAG +K+AY +I+ MP QPN ++ R LL A ++H + R ++L+LEP S
Sbjct: 371 ARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHG---DSDLAELARMKILQLEPNHSG 427
Query: 438 NLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAG 497
+ V+++N YA W V +R+ M G++K+ G S VE+G +H F G S +
Sbjct: 428 DYVLLSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDM 487
Query: 498 IYQILETLNLHMKVLNF 514
IY L+ + +++ +
Sbjct: 488 IYAKLKEMTDRLRLEGY 504
>gi|242047426|ref|XP_002461459.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
gi|241924836|gb|EER97980.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
Length = 568
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 182/481 (37%), Positives = 274/481 (56%), Gaps = 13/481 (2%)
Query: 29 RQCLSFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLS-SSKNLTYARSI 84
R C++ L+L + L Q+HA+ +G+ +L + + F S + L YA ++
Sbjct: 17 RHCVALLRLHLAAPSLATVKQLHARALRAGVPPAHPLLAKHLLFHLASLRAPPLRYAVAV 76
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
L + D P N ++R A S RP A+ + RR P TYP +L+ACA +
Sbjct: 77 LTRVLPDPDPFSLNTVLRIAASSSRPSLALALH---ARRLAPPDTHTYPPLLQACARLLS 133
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC--ERSVVSWNVII 202
L G ++ A K+GL + V+ N+LV YG+C A +VFD++ ER++VSWN ++
Sbjct: 134 LRHGERIHAEAAKNGLATLVFVKNSLVHLYGACGLFESAHRVFDEIPVGERNLVSWNSML 193
Query: 203 TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV 262
N E + F +M D+ F PD T++ VL+A E+G L+LG+ VH+ L + G V
Sbjct: 194 NGFAANGRPNEVLTIFREMLDVNFMPDGFTVVSVLTASAEIGALALGRRVHVYLTKVGLV 253
Query: 263 LNCQLGTALIDMYAKCGAVGCARLLFSRM-EEINVWTWSAMILGLAQHGYAEEALELFSN 321
N +G ALID+YAKCG V AR +F M V +W+++I+GLA +G+ +EALELF
Sbjct: 254 ENSHVGNALIDLYAKCGGVEDARRVFEEMGARRTVVSWTSLIVGLAVNGFGKEALELFGI 313
Query: 322 MKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAG 381
M+ + P +T +GVL AC+H G+V+DG+ YF+ M+ + I P H M D+L RAG
Sbjct: 314 MEREKLVPTEITMVGVLYACSHCGLVDDGFMYFNRMKEEYNIAPRIEHLGCMVDLLGRAG 373
Query: 382 HLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVI 441
+KEAY +I+ MP +PN +V R LL A ++H + +G RL+EL+P S + V+
Sbjct: 374 KVKEAYDYILTMPLEPNAVVWRTLLGACAMHK---KLELGEAAWARLVELDPGHSGDYVL 430
Query: 442 VANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQI 501
++N YA VG W V +R+ M G++K G S VEL S++ F G S E IYQ+
Sbjct: 431 LSNLYAAVGRWADVHVLRKTMVKDGVRKNPGRSLVELRNSVYEFVMGDRSHPESEQIYQM 490
Query: 502 L 502
L
Sbjct: 491 L 491
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 182/536 (33%), Positives = 276/536 (51%), Gaps = 62/536 (11%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LS + C S HL QIH++ +G+ + I +++ FC ++ YAR + D
Sbjct: 18 LSLFETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLF-----D 72
Query: 92 SVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
++P P WN + +GY+ P+ V ++++M R +KP +TYPF+ K L
Sbjct: 73 TIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQL 132
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII----- 202
G ++ +V K GLDS+V+ +N L+ Y C A +FD C+ VV+WN +I
Sbjct: 133 GRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNR 192
Query: 203 --------TVCVENL-----------------------WLGEAVGY------------FV 219
T V W GY F
Sbjct: 193 IKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFR 252
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+M+ +PDE TM+ VL+AC +LG L LG+W+ + + + +G ALIDMY KCG
Sbjct: 253 EMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCG 312
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
V A +F+ + + + +TW+AM++GLA +G EEAL +FS M +S++P+ VT++GVL
Sbjct: 313 NVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLS 372
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
AC H GMV++G ++F M HGI+P HY M D+L +AGHLKEA+ I NMP +PN
Sbjct: 373 ACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNS 432
Query: 400 IVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
IV ALL A IH DA+ + ++LELEP V+ N YA W+K+ +
Sbjct: 433 IVWGALLGACRIHKDAE----MAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLREL 488
Query: 459 RRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
R+ M + G+KK G S +E+ G +H F +G S + IY L + +K+ +
Sbjct: 489 RQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKIAGY 544
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 179/507 (35%), Positives = 268/507 (52%), Gaps = 35/507 (6%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
L L+ C + + L IHA + + L D L+ FC S++ L YA + N
Sbjct: 21 LVLLECCSNARDLKIIHAHMLRTHLFFDVFAASRLIAFCIDSTTNLLHYAIRVASQIQNP 80
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
++ I +N LIRG + S+ P + +I R G+ P T+PF++KACA++ GMQ
Sbjct: 81 NLFI-YNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQT 139
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGS-------------------------------CRRK 180
K G + D Y N+LV Y S C
Sbjct: 140 HGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDA 199
Query: 181 RDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
+ A ++FD M ER++V+W+ +I+ N +AV F ++ G +ET M+ V+S+C
Sbjct: 200 KSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSC 259
Query: 241 TELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
LG L++G+ H ++ LN LGTA++DMYA+CG V A ++F ++ E +V W+
Sbjct: 260 AHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWT 319
Query: 301 AMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHV 360
A+I GLA HGYAE+AL FS M P +TF VL AC+HAGMVE G F M+
Sbjct: 320 ALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRD 379
Query: 361 HGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGV 420
HG++P HY M D+L RAG L++A F++ MP +PN + RALL A IH V
Sbjct: 380 HGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHK---NVEV 436
Query: 421 GNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGG 480
G V + LLE++P S + V+++N YA W+ V+ +R+ MK+ G++K G S +E+ G
Sbjct: 437 GERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSLIEIDG 496
Query: 481 SIHRFYSGYDSQVELAGIYQILETLNL 507
+H F G + E+ I +I E + L
Sbjct: 497 KVHEFTIGDKTHPEIEKIERIWEDIIL 523
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 176/468 (37%), Positives = 254/468 (54%), Gaps = 6/468 (1%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
IH +G ++ + LV S ++ AR I +V + WN++I GY
Sbjct: 298 IHGYSMRAGFESFVNVSTALVDM--YSKCGSVGTARLIFDRMTGKTV-VSWNSMIDGYVQ 354
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+ P A+ +F M ++ T T L ACA++ + +G V + + L SDV
Sbjct: 355 NGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSV 414
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
N+L+ Y C+R A ++F+++ +++VSWN +I +N + EA+ YF KM+
Sbjct: 415 MNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNI 474
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
+PD TM+ V+ A EL L KW+H +I N + TAL+DMYAKCGAV AR
Sbjct: 475 KPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARK 534
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
LF M+E +V TW+AMI G HG + ALELF MK I PN VTFL VL AC+H+G+
Sbjct: 535 LFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGL 594
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALL 406
VE+G++YF M+ +G++P HY M D+L RA L EA+ FI MP +P V A+L
Sbjct: 595 VEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAML 654
Query: 407 SASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVG 466
A IH +G + R+ +L+P V++AN YA MW+KV+ VR M+ G
Sbjct: 655 GACRIHK---NVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKG 711
Query: 467 LKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
++K G S VEL +H FYSG S + IY LETL +K +
Sbjct: 712 IQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKAAGY 759
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 176/325 (54%), Gaps = 6/325 (1%)
Query: 34 FLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILCNYVNDS 92
L+LC S K L+Q I +GL ++ +LV FC S + + + + D
Sbjct: 83 LLELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGS----LHEAARVFQPIEDK 138
Query: 93 VPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQ 152
+ ++ +++GYA + +AV F M+ G++P + + ++LK C + + L +G ++
Sbjct: 139 IDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIH 198
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
+ +G S+V+ +V Y CR +A K+FD M ER +V WN II+ +N +
Sbjct: 199 CQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGK 258
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
A+ ++M++ G PD T++ +L A ++G+L +G+ +H + G + TAL+
Sbjct: 259 TALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALV 318
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
DMY+KCG+VG ARL+F RM V +W++MI G Q+G A+E+F M + + V
Sbjct: 319 DMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNV 378
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEM 357
T +G L AC G VE G R+ H++
Sbjct: 379 TVMGALHACADLGDVEQG-RFVHKL 402
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 155/319 (48%), Gaps = 24/319 (7%)
Query: 34 FLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTY----ARS 83
LK+C L +IH Q+ V+G ++ + +V C L + R
Sbjct: 181 LLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERD 240
Query: 84 ILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS 143
++C WN +I GYA + + A+ + + M+ G +P T +L A A++
Sbjct: 241 LVC----------WNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVG 290
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
L G + ++G +S V + LV Y C A +FD M ++VVSWN +I
Sbjct: 291 SLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMID 350
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH--LQLIERGT 261
V+N G A+ F KM D E T++ L AC +LG++ G++VH L +E G+
Sbjct: 351 GYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGS 410
Query: 262 VLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSN 321
+ + +LI MY+KC V A +F ++ + +W+AMILG AQ+G EA++ F
Sbjct: 411 --DVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCK 468
Query: 322 MKNSSISPNYVTFLGVLCA 340
M+ +I P+ T + V+ A
Sbjct: 469 MQLQNIKPDSFTMVSVIPA 487
>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 177/473 (37%), Positives = 263/473 (55%), Gaps = 7/473 (1%)
Query: 46 QIHAQIQVS-GLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGY 104
Q+HAQI S + + L L F LS + +LTYA IL N ++ N +IR Y
Sbjct: 11 QLHAQILKSPDPKKQTRNLTPLFTFAALSPAGDLTYAHLIL-NSLSTQNSFFHNTMIRAY 69
Query: 105 AWSDRPREAVWVFIDM--KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
+ + P +A+ +F+ M + +P +FTYPF+LK+CA + G Q+ + KSGL+S
Sbjct: 70 SQTPDPTQALHLFLSMLCQPTSPRPDKFTYPFLLKSCARLKQPRVGKQLHGLIYKSGLES 129
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
D Y +N L+ Y SC + A KVF M +R VVSW +I V++ EA+ F +M
Sbjct: 130 DRYVSNGLIHMYSSCGKSGRAYKVFGKMRDRDVVSWTSMIDGFVDDDRALEAIRLFEEMV 189
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
+ G EP+E T++ VL AC + G + +G+ V + ER L + TALIDMYAKCG++G
Sbjct: 190 EDGVEPNEATVVSVLRACADAGAVGMGRRVQGVIEERKIGLEANVRTALIDMYAKCGSIG 249
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
AR +F + +V+ W+AMI GLA HG EEA+ LF M++ + P+ T VL AC
Sbjct: 250 SARKVFDGIVNKDVFAWTAMISGLANHGLCEEAVTLFDQMESFGLRPDERTMTAVLSACR 309
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVL 402
+AG +G+ YF+ M +GIKP HY M D+LAR GHL EA FI MP +P+ ++
Sbjct: 310 NAGWFSEGFAYFNSMWCKYGIKPTIQHYGCMVDLLARTGHLDEAEEFIRKMPIEPDVVLW 369
Query: 403 RALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRF 461
R L+ AS +H D + + + R LL+++ + V++ N YA G W + +R
Sbjct: 370 RTLIWASKVHGDIDRSEQLMKD--RGLLKMDSDDCGSYVLLGNVYASAGKWHDKAKMREL 427
Query: 462 MKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
M GL K G S +E+ G +H F +G +E IY L+ + +K +
Sbjct: 428 MNQKGLSKPPGCSRIEVDGLVHEFAAGDSGHIEAEKIYAKLDEVEERLKAEGY 480
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 173/489 (35%), Positives = 276/489 (56%), Gaps = 9/489 (1%)
Query: 24 LLSKARQCLSFLKL--CCSKKHLYQIHAQIQVSGLQ-NDAQILKELVRF-CTLSSSKNLT 79
LL +C++ L+ S L QIHA G+ +DA++ K L+ + +L S ++
Sbjct: 11 LLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMS 70
Query: 80 YARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKA 138
YA + WN LIRGYA A ++ +M+ G ++P TYPF++KA
Sbjct: 71 YAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKA 130
Query: 139 CAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSW 198
++ + G + + V +SG S +Y N+L+ Y +C A KVFD M E+ +V+W
Sbjct: 131 VTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAW 190
Query: 199 NVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
N +I EN EA+ + +M G +PD T++ +LSAC ++G L+LGK VH+ +I+
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 259 RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALEL 318
G N L+D+YA+CG V A+ LF M + N +W+++I+GLA +G+ +EA+EL
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 310
Query: 319 FSNMKNSS-ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL 377
F M+++ + P +TF+G+L AC+H GMV++G+ YF M + I+P H+ M D+L
Sbjct: 311 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 370
Query: 378 ARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
ARAG +K+AY +I +MP QPN ++ R LL A ++H + R ++L+LEP S
Sbjct: 371 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG---DSDLAEFARIQILQLEPNHSG 427
Query: 438 NLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAG 497
+ V+++N YA W V +R+ M G+KK+ G S VE+G +H F G S +
Sbjct: 428 DYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDA 487
Query: 498 IYQILETLN 506
IY L+ +
Sbjct: 488 IYAKLKEMT 496
>gi|356496056|ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 182/498 (36%), Positives = 271/498 (54%), Gaps = 7/498 (1%)
Query: 14 PPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLS 73
PP+ S N+ + LS LK C S + Q+HA I GL D+ LV C LS
Sbjct: 19 PPQSSELNAKF--NEQGWLSLLKRCKSMEEFKQVHAHILKLGLFYDSFCGSNLVASCALS 76
Query: 74 SSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYP 133
++ YA SI + + + +N +IRG S EA+ ++++M RGI+P FTYP
Sbjct: 77 RWGSMEYACSIF-SQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYP 135
Query: 134 FVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER 193
FVLKAC+ + L EG+Q+ A+V K+GL+ DV+ N L+ YG C A VF+ M E+
Sbjct: 136 FVLKACSLLVALKEGVQIHAHVFKAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEK 195
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLV-VLSACTELGNLSLGKWV 252
SV SW+ II E + M G E ++LV LSACT LG+ +LG+ +
Sbjct: 196 SVASWSSIIGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNLGRCI 255
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H L+ + LN + T+LIDMY KCG++ +F M N ++++ MI GLA HG
Sbjct: 256 HGILLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRG 315
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
EA+ +FS+M ++P+ V ++GVL AC+HAG+V +G + F+ M+ H IKP HY
Sbjct: 316 REAVRVFSDMLEEGLTPDDVVYVGVLSACSHAGLVNEGLQCFNRMQFEHMIKPTIQHYGC 375
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELE 432
M D++ RAG LKEAY I +MP +PN +V R+LLSA +H + +G + L
Sbjct: 376 MVDLMGRAGMLKEAYDLIKSMPIKPNDVVWRSLLSACKVH---HNLEIGEIAAENIFRLN 432
Query: 433 PRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQ 492
+ +++AN YA W V+ +R M L + G S VE ++++F S SQ
Sbjct: 433 KHNPGDYLVLANMYARAKKWANVARIRTEMAEKHLVQTPGFSLVEANRNVYKFVSQDKSQ 492
Query: 493 VELAGIYQILETLNLHMK 510
IY +++ + +K
Sbjct: 493 PICETIYDMIQQMEWQLK 510
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 164/420 (39%), Positives = 234/420 (55%), Gaps = 3/420 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN+++ GY + P +A+ VF M GI PT T L ACA++ L G V
Sbjct: 315 VSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKF 374
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V + L SD+ N+L+ Y C+R A +F+++ R+ VSWN +I +N + EA
Sbjct: 375 VDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEA 434
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +MK LG +PD TM+ V+ A EL KW+H +I N + TAL+DM
Sbjct: 435 LNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDM 494
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCGA+ AR LF + + +V TW+AMI G HG AL+LF MK ++ PN +T+
Sbjct: 495 YSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITY 554
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
L V+ AC+H+G+V++G R+F M+ +G++P HY M D+L RAG +KEA+ FI NMP
Sbjct: 555 LSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMP 614
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
P V A+L A IH VG + ++L EL P V++AN YA W K
Sbjct: 615 ISPGITVYGAMLGACKIHK---NIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSK 671
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
V+ VR+ M+ GLKK G S VEL +H FYSG + + IY LE L +K +
Sbjct: 672 VAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGY 731
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 172/323 (53%), Gaps = 4/323 (1%)
Query: 34 FLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSV 93
L+LC S K L+QI + +GL N+ +LV + S N AR + ++D +
Sbjct: 55 LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSIN-EAAR--VFEPIDDKL 111
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
++ +++GYA + A+ M+ +KP + + ++LK C + + L G ++
Sbjct: 112 DALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHG 171
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+ + ++V+ +V Y CR+ DA K+FD M ER +VSWN II +N + +
Sbjct: 172 QLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKK 231
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
A+ ++M+D G PD T++ VL A ++G L +GK +H I G + TAL D
Sbjct: 232 ALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALAD 291
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MY+KCG+V ARL+F M++ V +W++M+ G Q+G E+A+ +F M I P VT
Sbjct: 292 MYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVT 351
Query: 334 FLGVLCACNHAGMVEDGYRYFHE 356
+ L AC G +E G ++ H+
Sbjct: 352 IMEALHACADLGDLERG-KFVHK 373
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 128/246 (52%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I G++ + ++A+ + + M+ G +P T VL A A++ L G +
Sbjct: 214 VSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGY 273
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
++G V + L Y C A +FD M +++VVSWN ++ V+N +A
Sbjct: 274 AIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKA 333
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F KM + G +P T++ L AC +LG+L GK+VH + + + + +LI M
Sbjct: 334 IAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISM 393
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KC V A +F+ + +W+AMILG AQ+G EAL FS MK+ + P+ T
Sbjct: 394 YSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTM 453
Query: 335 LGVLCA 340
+ V+ A
Sbjct: 454 VSVIPA 459
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 132/306 (43%), Gaps = 36/306 (11%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H + L +D ++ L+ S K + A I N +N + WN +I GYA
Sbjct: 371 VHKFVDQLNLGSDISVMNSLISM--YSKCKRVDIASDIF-NNLNGRTHVSWNAMILGYAQ 427
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+ R EA+ F +MK G+KP FT V+ A AE+S + + +S LD +++
Sbjct: 428 NGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFV 487
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
LV Y C A K+FD + +R V++WN +I + A+ F KMK
Sbjct: 488 TTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAV 547
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
EP++ T L V+SAC+ G + G H + +++ L
Sbjct: 548 EPNDITYLSVISACSHSGLVDEG-LRHFKSMKQDYGL----------------------- 583
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
E ++ + AM+ L + G +EA + NM ISP + +L AC
Sbjct: 584 ------EPSMDHYGAMVDLLGRAGRIKEAWDFIENM---PISPGITVYGAMLGACKIHKN 634
Query: 347 VEDGYR 352
+E G +
Sbjct: 635 IEVGEK 640
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 98/232 (42%), Gaps = 19/232 (8%)
Query: 19 NCNSDLLSKARQCLSF--------LKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFC 70
NC S++ S + SF L +H IH I S L + + LV
Sbjct: 436 NCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDM- 494
Query: 71 TLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEF 130
S + AR + + ++D I WN +I GY R A+ +F MK+ ++P +
Sbjct: 495 -YSKCGAIHMARKLF-DMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDI 552
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKS-GLDSDVYTNNNLVRFYGSCRRKRDACKVFDD 189
TY V+ AC+ ++EG++ ++ + GL+ + +V G R ++A ++
Sbjct: 553 TYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIEN 612
Query: 190 M-CERSVVSWNVIITVCV--ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
M + + ++ C +N+ +GE K PDE V+L+
Sbjct: 613 MPISPGITVYGAMLGACKIHKNIEVGEKAA----KKLFELNPDEGGYHVLLA 660
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 176/478 (36%), Positives = 258/478 (53%), Gaps = 39/478 (8%)
Query: 65 ELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRG 124
++V FC L S +L YAR + N + + N++IRGY + PR+A+ + M +G
Sbjct: 15 KIVAFCALHDSGSLPYARLVF-NQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQG 73
Query: 125 IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDAC 184
+ P FT+P + K+C L EG Q+ + TK G SD Y N L+ Y +C A
Sbjct: 74 LDPDRFTFPSLFKSCGV---LCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSAR 130
Query: 185 KVFDDMCERSVVSW--------------------------------NVIITVCVENLWLG 212
KVFD M +SVVSW N++I VE+
Sbjct: 131 KVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYE 190
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
EA+ F +M+ G + D+ TM +L ACT LG L LGKW+H+ + + ++ LGTAL+
Sbjct: 191 EALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALV 250
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
DMYAKCG++ A +F M E +V TW+A+I+GLA G +ALELF M+ S + P+ +
Sbjct: 251 DMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAI 310
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
TF+GVL AC+HAG+V +G YF+ M + +GI+P HY M D+L RAG + EA I N
Sbjct: 311 TFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQN 370
Query: 393 MPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMW 452
MP P+ VL LLSA IH V ++L+EL+P+ V+++N Y+ + W
Sbjct: 371 MPMAPDYFVLVGLLSACRIHGNLV---VAERAAQQLIELDPKNGGTYVLLSNIYSSMKNW 427
Query: 453 EKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
E +R M +KK G S +E+GG +H F G S + + IY+ L+ + +K
Sbjct: 428 EAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLK 485
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 184/511 (36%), Positives = 269/511 (52%), Gaps = 39/511 (7%)
Query: 30 QCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
Q ++ L C + + Q+HA+I ++GL +L +L+R T + Y SI N V
Sbjct: 48 QIVTTLDGCKNLTQIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIF-NQV 106
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
N P +N LIRGY +R +E+ + M++ G+ P FT+ + KAC + G
Sbjct: 107 NYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGR 166
Query: 150 QVQA-NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
Q+ + G D++ N+++ Y C KVFD+M R V+SW +I+ V++
Sbjct: 167 QIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKS 226
Query: 209 --------LWLG-----------------------EAVGYFVKMKDLGFEPDETTMLVVL 237
L+ G EA+ +F KM++ G E DE T++ V+
Sbjct: 227 GNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVI 286
Query: 238 SACTELGNLSLGKWVH--LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
SAC +LG W+ + E G + +G+ALIDMY+KCG+VG A +F M+E N
Sbjct: 287 SACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERN 346
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
V+++S+MILG A HG +A++LF M + I PN VTF+GVL AC+HAGMVE G++ F
Sbjct: 347 VYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFE 406
Query: 356 EMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAK 415
ME +GIKP HY M D+L RAG L+EA+ + MP +P+ V ALL A IH +
Sbjct: 407 LMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHKSP 466
Query: 416 YQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSW 475
+ L ELEP N +++AN YA G W VS VR+ M+ GL+K SW
Sbjct: 467 ---DIAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFSW 523
Query: 476 VEL-GGSIHRFYSGYDSQVELAGIYQILETL 505
+E G +H F+SG + I Q LE L
Sbjct: 524 IESEKGMVHEFFSGDMTHPRSGEIKQALEDL 554
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 180/488 (36%), Positives = 273/488 (55%), Gaps = 13/488 (2%)
Query: 29 RQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKN-LTYARSILCN 87
+ CL L+ C + L Q+H I G QN+ +L +F + SS+ + + YA S++ +
Sbjct: 8 QPCLDILQACNTLPKLAQLHTHIIKLGFQNNPLVL---TKFTSASSNLDAIPYAMSLVFS 64
Query: 88 YVNDSV--PIPWNNLIRGYAWSDRPRE-AVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
+ V ++ +IR YA S + + A++ + M GI P ++ +PFVLKACA +
Sbjct: 65 VEDARVYDAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRD 124
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRD-ACKVFDDMCERSVVSWNVIIT 203
LN G V ++ K G D D++ N +V Y C + A K+FD+M + V+W +I
Sbjct: 125 LNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIG 184
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
AVG F KM+ G PD+ TM+ VLSACT+LG L LGKW+ IE+ VL
Sbjct: 185 GYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIE-SYIEKERVL 243
Query: 264 -NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM 322
+L AL+DM+AKCG V A LF M + + +W+++I+GLA HG EA+ LF M
Sbjct: 244 KTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEM 303
Query: 323 KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGH 382
K S + P + F+G+L AC+H+G+VE G +YF EM GI P HY M D+L+RAG
Sbjct: 304 KASGMVPEDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGL 363
Query: 383 LKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIV 442
+ EA F+ MP +PNPI+ R L+SA +H + +G + ++L+ EP N V++
Sbjct: 364 VTEALEFVERMPIEPNPIIWRTLISACRVHG---ELKLGESISKQLIRNEPMHESNYVLL 420
Query: 443 ANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQIL 502
+N Y ++ WEK S +R M G++K+ G + +EL IH F G S + I +++
Sbjct: 421 SNIYGKMLDWEKKSKIRVAMGKKGIQKVPGSTMIELDNEIHEFIVGDRSHNQYNEIIKMV 480
Query: 503 ETLNLHMK 510
+ MK
Sbjct: 481 NEMGREMK 488
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 192/559 (34%), Positives = 289/559 (51%), Gaps = 74/559 (13%)
Query: 7 PTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKEL 66
P F P+P +LSK C + + L Q+HA +G D E+
Sbjct: 8 PNRTFNFSPQPPL----ILSKP------FTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEV 57
Query: 67 VRFCTLSSSKNLTYARSILCNYVNDSVPIP----WNNLIRGYAWSDRPR---EAVWVFID 119
++FC SS +++ YAR++ +P P WN ++R A ++ EA+ +F
Sbjct: 58 IKFCAFSS-RDIDYARAVF-----RQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSA 111
Query: 120 MKRRG-IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFY---- 174
M G +KP FT+P VLKACA S L EG Q+ + K G D + +NLVR Y
Sbjct: 112 MLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCA 171
Query: 175 -----------------GSC-----RRKRD---------------------ACKVFDDMC 191
GSC +RK+D A +FD+M
Sbjct: 172 VMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMP 231
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
+RSVVSWNV+I+ +N EA+ F +M+ +P+ T++ VL A +G L LGKW
Sbjct: 232 QRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKW 291
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+HL + ++ LG+AL+DMY+KCG++ A +F + + N TWSA+I A HG
Sbjct: 292 IHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGR 351
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
AE+A+ F M + ++PN V ++G+L AC+HAG+VE+G +F M V G++P HY
Sbjct: 352 AEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYG 411
Query: 372 TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLEL 431
M D+L RAGHL+EA I NMP +P+ ++ +ALL A +H +G V L+EL
Sbjct: 412 CMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHK---NLKMGERVAETLMEL 468
Query: 432 EPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDS 491
P S + V ++N YA +G WE V+ VR MK + ++K G SW+E+ G IH F DS
Sbjct: 469 APHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDS 528
Query: 492 QVELAGIYQILETLNLHMK 510
+ I +L +++ ++
Sbjct: 529 HSKAKEIQAMLGEMSMKLR 547
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/493 (35%), Positives = 278/493 (56%), Gaps = 9/493 (1%)
Query: 24 LLSKARQCLSFLKL--CCSKKHLYQIHAQIQVSGLQ-NDAQILKELVRF-CTLSSSKNLT 79
LL +C++ L+ S L QIHA G+ +DA++ K L+ + +L S ++
Sbjct: 11 LLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMS 70
Query: 80 YARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKA 138
YA + WN LIRGYA A ++ +M+ G ++P TYPF++KA
Sbjct: 71 YAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKA 130
Query: 139 CAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSW 198
++ + G + + V +SG S +Y N+L+ Y +C A KVFD M E+ +V+W
Sbjct: 131 VTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAW 190
Query: 199 NVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
N +I EN EA+ + +M G +PD T++ +LSAC ++G L+LGK VH+ +I+
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 259 RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALEL 318
G N L+D+YA+CG V A+ LF M + N +W+++I+GLA +G+ +EA+EL
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 310
Query: 319 FSNMKNSS-ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL 377
F M+++ + P +TF+G+L AC+H GMV++G+ YF M + I+P H+ M D+L
Sbjct: 311 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 370
Query: 378 ARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
ARAG +K+AY +I +MP QPN ++ R LL A ++H + R ++L+LEP S
Sbjct: 371 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG---DSDLAEFARIQILQLEPNHSG 427
Query: 438 NLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAG 497
+ V+++N YA W V +R+ M G+KK+ G S VE+G +H F G S +
Sbjct: 428 DYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDA 487
Query: 498 IYQILETLNLHMK 510
IY L+ + ++
Sbjct: 488 IYAKLKEMTGRLR 500
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 171/505 (33%), Positives = 274/505 (54%), Gaps = 8/505 (1%)
Query: 10 NHIFPPKP---SNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKEL 66
+H+ P K S+ +L K ++ L +K C S + Q+H QI GL D+ +
Sbjct: 11 HHLLPSKDLPQSSSELNLKQKEQEYLCLVKKCKSLEEFKQVHVQILKFGLFLDSFCSSSV 70
Query: 67 VRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIK 126
+ C LS ++ YA SI +++ +N +IRGY + A++++ DM +R ++
Sbjct: 71 LATCALSDWNSMDYACSIF-QQLDEPTTFDFNTMIRGYVNNMNFENAIYLYNDMLQREVE 129
Query: 127 PTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKV 186
P FTYP VLKACA ++ + EGMQ+ +V K GL+ DVY N+L+ YG CR +C +
Sbjct: 130 PDNFTYPVVLKACARLAVIQEGMQIHGHVFKLGLEDDVYVQNSLINMYGKCRDIEMSCAI 189
Query: 187 FDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG-FEPDETTMLVVLSACTELGN 245
F M ++SV SW+ II E + F M G + +E+ ++ VLSACT LG
Sbjct: 190 FRRMEQKSVASWSAIIAAHASLAMWWECLALFEDMSREGCWRAEESILVNVLSACTHLGA 249
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
LG+ H L++ T LN + T+L+DMY KCG++ LF M N ++S +I G
Sbjct: 250 FHLGRCAHGSLLKNITELNVAVMTSLMDMYVKCGSLQKGLCLFQNMTRKNQLSYSVIISG 309
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKP 365
L HGY +AL++FS M + P+ VT++ VL AC+H+G+V++G F +M+ + I+P
Sbjct: 310 LGLHGYGRQALQIFSEMVEEGLEPDDVTYVSVLSACSHSGLVDEGLDLFDKMKFEYRIEP 369
Query: 366 MRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVR 425
HY M D+ RAG L+EA+ + +MP + N ++ R+LLSA +HD +G
Sbjct: 370 TMQHYGCMVDLKGRAGLLEEAFQLVQSMPIKANDVLWRSLLSACKVHDNL---KLGEIAA 426
Query: 426 RRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRF 485
L L + ++++N YA WE + +R M N GL + G S VE+ +++F
Sbjct: 427 ENLFRLSSHNPSDYLVLSNMYARAQQWENAAKIRTKMINRGLIQTPGYSLVEVKSKVYKF 486
Query: 486 YSGYDSQVELAGIYQILETLNLHMK 510
S S + IY+++ + ++
Sbjct: 487 VSQDKSYCKSGNIYKMIHQMEWQLR 511
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 187/524 (35%), Positives = 283/524 (54%), Gaps = 51/524 (9%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW 97
C + + L Q+HAQ+ + D EL+RF +S ++L YAR I + + +
Sbjct: 21 CKTMQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNC-FSY 79
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRR-GIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
N LIR + S+ P +A+ VFI+M ++P FT+P V KAC L EG QV
Sbjct: 80 NTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAV 139
Query: 157 KSGLDSDVYTNNNLVRFYGSC-------------------------RRKRD--------- 182
K GLDSD + +N+VR Y SC +R+ D
Sbjct: 140 KFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVM 199
Query: 183 ------------ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDE 230
A +FD+M +RSVVSWNV+I ++ EAV F +M+ P+
Sbjct: 200 IDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNY 259
Query: 231 TTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSR 290
T++ VL A + LG L LGKWVHL + ++ LG+ALIDMYAKCG++ A +F
Sbjct: 260 VTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEG 319
Query: 291 MEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
+ + NV TWS +I GLA HG A++ L+ F +M+ + + P+ VT++G+L AC+HAG+V +G
Sbjct: 320 LPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEG 379
Query: 351 YRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASS 410
+F M V G++P HY M D+L RAG L+E+ I+NMP +P+ ++ +ALL A
Sbjct: 380 RWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACK 439
Query: 411 IHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKM 470
+H +G V L+EL P S + V ++N YA +G WE V+ VR MK + ++K
Sbjct: 440 MHG---NVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKD 496
Query: 471 KGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
G SW+EL G IH F DS + I+ +L+ ++ ++ ++ +
Sbjct: 497 PGCSWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSRNLILVGY 540
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 185/528 (35%), Positives = 279/528 (52%), Gaps = 64/528 (12%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP- 96
C + + L Q+HA +G D E+++FC SS +++ YAR++ +P P
Sbjct: 29 CKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSS-RDIDYARAVF-----RQMPEPN 82
Query: 97 ---WNNLIRGYAWSDRPR---EAVWVFIDMKRRG-IKPTEFTYPFVLKACAEISGLNEGM 149
WN ++R A ++ EA+ +F M G +KP FT+P VLKACA S L EG
Sbjct: 83 CFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGK 142
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFY---------------------GSC-----RRKRD- 182
Q+ + K G D + +NLVR Y GSC +RK+D
Sbjct: 143 QIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDG 202
Query: 183 --------------------ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
A +FD+M RSVVSWNV+I+ +N EA+ F +M+
Sbjct: 203 NVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQ 262
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
+P+ T++ VL A +G L LGKW+HL + ++ LG+AL+DMY+KCG++
Sbjct: 263 SSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSID 322
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
A +F + + N TWSA+I A HG AE+A+ F M + ++PN V ++G+L AC+
Sbjct: 323 KALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACS 382
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVL 402
HAG+VE+G +F M V G++P HY M D+L RAGHL+EA I NMP +P+ ++
Sbjct: 383 HAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIW 442
Query: 403 RALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFM 462
+ALL A +H +G V L+EL P S + V ++N YA +G WE V+ VR M
Sbjct: 443 KALLGACKMHK---NLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKM 499
Query: 463 KNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
K + ++K G SW+E+ G IH F DS + I +L +++ ++
Sbjct: 500 KGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLR 547
>gi|356529748|ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 604
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 179/498 (35%), Positives = 270/498 (54%), Gaps = 8/498 (1%)
Query: 14 PPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLS 73
PP+ S N+ Q LS LK C S + Q+HA I GL D+ LV C LS
Sbjct: 19 PPQSSELNAKF---NVQGLSLLKRCKSMEEFKQVHAHILKLGLFYDSFCGSNLVATCALS 75
Query: 74 SSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYP 133
++ YA SI + + +N +IRG S EA+ ++++M RGI+P FTYP
Sbjct: 76 RWGSMEYACSIF-RQIEEPGSFEYNTMIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYP 134
Query: 134 FVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER 193
FVLKAC+ + L EG+Q+ A+V K+GL+ DV+ N L+ YG C A VF+ M E+
Sbjct: 135 FVLKACSLLGALKEGVQIHAHVFKAGLEGDVFVQNGLINMYGKCGAIEHASVVFEQMDEK 194
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLV-VLSACTELGNLSLGKWV 252
SV SW+ II E + M G E ++LV LSACT LG+ + G+ +
Sbjct: 195 SVASWSSIIGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNFGRCI 254
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H L+ + LN + T+LIDMY K G++ +F M + N ++++ +I GLA HG
Sbjct: 255 HGILLRNISELNVAVKTSLIDMYVKSGSLEKGLCVFQNMAQKNRYSYTVIITGLAIHGRG 314
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
EAL +FS+M ++P+ V ++GVL AC+HAG+V +G + F+ ++ H IKP HY
Sbjct: 315 REALSVFSDMLEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFNRLQFEHKIKPTIQHYGC 374
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELE 432
M D++ RAG LK AY I +MP +PN +V R+LLSA +H + +G + +L
Sbjct: 375 MVDLMGRAGMLKGAYDLIKSMPIKPNDVVWRSLLSACKVH---HNLEIGEIAAENIFKLN 431
Query: 433 PRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQ 492
+ +++AN YA W V+ +R M L + G S VE ++++F S SQ
Sbjct: 432 QHNPGDYLVLANMYARAKKWADVARIRTEMAEKHLVQTPGFSLVEANRNVYKFVSQDKSQ 491
Query: 493 VELAGIYQILETLNLHMK 510
+ IY +++ + +K
Sbjct: 492 PQCETIYDMIQQMEWQLK 509
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 169/478 (35%), Positives = 269/478 (56%), Gaps = 6/478 (1%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKN-LTYARSILCNYVNDSVPIP 96
C S++ L QI A + Q D +L+ FCT S +++ ++YAR + + +++ +
Sbjct: 41 CNSERELMQIQA-YAIKSHQEDVSFNTKLINFCTESPTESSMSYARHLF-DAMSEPDIVI 98
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
+N++ RGY+ S P E +F+++ + P +T+P +LKACA L EG Q+
Sbjct: 99 FNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAKALEEGRQLHCLSM 158
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
K G+D +VY L+ Y C A VFD + E VV +N +IT EA+
Sbjct: 159 KLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALS 218
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F +M+ +P+E T+L VLS+C LG+L LGKW+H + G ++ TALIDM+A
Sbjct: 219 LFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFA 278
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KCG++ A +F M + WSAMI+ A HG AE ++ +F M++ ++ P+ +TFLG
Sbjct: 279 KCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEITFLG 338
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
+L AC+H G+VE+G YF M H GI P HY +M D+L RAGHL++AY FI +P
Sbjct: 339 LLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPIS 398
Query: 397 PNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVS 456
P P++ R LL+A S H+ + +V R+LEL+ + VI++N YA WE V
Sbjct: 399 PTPMLWRILLAACSSHN---NLELAEKVSERILELDDSHGGDYVILSNLYARNKKWEAVD 455
Query: 457 NVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
++R+ MK+ K+ G S +E+ +H F+SG + +++ L+ + +K+ +
Sbjct: 456 SLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLAGY 513
>gi|449441061|ref|XP_004138302.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
gi|449477575|ref|XP_004155061.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 169/460 (36%), Positives = 258/460 (56%), Gaps = 6/460 (1%)
Query: 21 NSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTY 80
N +K ++ + K C + K L Q+HA I G + ++ +L+ FC +S ++ Y
Sbjct: 48 NGGYFAKEQKFMFLFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNY 107
Query: 81 ARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACA 140
A ++ + + ++ WN +IRG+ + + A + M +GI FT+ F+LK
Sbjct: 108 A-VVVFDRIENADGFLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTG 166
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
++ + G Q+ N+ K GLDS VY N L+ YG + A +FD++ + +V+WN
Sbjct: 167 QLGSIMLGKQLHVNILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNA 226
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
+I V EA+ FV+M G EPDE T++V +SAC+ LG L G+WVH +
Sbjct: 227 VIDCHVSCGMYNEALDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSND 286
Query: 261 TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS 320
+ +LIDMYAKCGAV AR +F+ + N+ TW+ MI+GLA HG AE+AL LFS
Sbjct: 287 RGKTIAVFNSLIDMYAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFS 346
Query: 321 NMKNSSI-SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILAR 379
NM + +P+ VTFL VLCACN+ G VE+G RYF M I+P HY +M DIL R
Sbjct: 347 NMLAERVETPDGVTFLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGR 406
Query: 380 AGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNL 439
AG ++EAY I +MP + N ++ R LL+A +H +G V +LE+ S +
Sbjct: 407 AGFVEEAYQLIKSMPMECNAVIWRTLLAACQMHG---NVELGERVSSHVLEIVADHSSDY 463
Query: 440 VIVANKYAEVGMWEKVSNVRRFMKNVGLKKMK-GMSWVEL 478
V++AN YA G W ++ R+ M G++K + G S++E+
Sbjct: 464 VLLANMYASSGQWNEMIKTRKSMHRKGVEKPEPGNSYLEI 503
>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 177/480 (36%), Positives = 266/480 (55%), Gaps = 5/480 (1%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LS LK C S + ++HA I GL D+ LV C LS ++ YA SI + +
Sbjct: 35 LSLLKRCKSMEEFKKVHAHILKLGLFYDSFCGSNLVASCALSRWGSMEYACSIF-RQIEE 93
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
+N +IRG S EA+ ++++M RGI+P FTYPFVLKAC+ + L EG+Q+
Sbjct: 94 PGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQI 153
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
A+V +GL+ DV+ N L+ YG C A VF+ M E+SV SW+ II
Sbjct: 154 HAHVFNAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMW 213
Query: 212 GEAVGYFVKMKDLGFEPDETTMLV-VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
E + M G E ++LV LSACT LG+ +LG+ +H L+ + LN + T+
Sbjct: 214 HECLMLLGDMSREGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTS 273
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
LIDMY KCG++ +F M N ++++ MI GLA HG EAL +FS+M ++P+
Sbjct: 274 LIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREALRVFSDMLEEGLTPD 333
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
V ++GVL AC+HAG+V++G++ F+ M+ H IKP HY M D++ RAG LKEAY I
Sbjct: 334 DVVYVGVLSACSHAGLVKEGFQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLI 393
Query: 391 MNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVG 450
+MP +PN +V R+LLSA +H + +G + +L + +++AN YA
Sbjct: 394 KSMPIKPNDVVWRSLLSACKVH---HNLEIGEIAADNIFKLNKHNPGDYLVLANMYARAQ 450
Query: 451 MWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
W V+ +R M L + G S VE ++++F S SQ + IY +++ + +K
Sbjct: 451 KWANVARIRTEMVEKNLVQTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQQMEWQLK 510
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 244/422 (57%), Gaps = 13/422 (3%)
Query: 91 DSVPIP----WNNLIRGY-AWSDRPREAVWVFIDMKRRGI-KPTEFTYPFVLKACAEISG 144
D +P P +N+LIR A P A+ V+ M R G +P FT F LKACA +
Sbjct: 133 DQIPDPTAFCYNSLIRALPAAGSAP--ALAVYRRMLRAGSPRPNSFTLAFALKACAAVPA 190
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC-ERSVVSWNVIIT 203
EG Q+ A + GL + Y L+ Y C + A VFD M ++++V+W+ +++
Sbjct: 191 PGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDKNLVAWSAMVS 250
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
+ EA+G F +M+ +G EPDE TM+ V+SAC + G L LGKWVH + +G +
Sbjct: 251 GYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGITV 310
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
+ +L TALIDMYAKCG + AR +F M E + WSAMI+G A HG E+AL LFS M
Sbjct: 311 DLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRML 370
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+ PN VTF+GVL AC H+G+VEDG RY+ M+++ GIKP +Y M D+L R+G L
Sbjct: 371 ELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQNL-GIKPSMENYGCMVDLLCRSGLL 429
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
+AY+F++ MP PN ++ R LL A + + + +RLLELEP +N V+++
Sbjct: 430 DDAYSFVIGMPVSPNSVIWRTLLVACK---SSNRIDIAESATKRLLELEPHNPENYVLLS 486
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N YA W++VS +RR MK + + G S +E+ G +H F DS E+ I +L
Sbjct: 487 NLYASNSQWDRVSYLRRKMKGKNVTAIAGRSSIEINGHLHEFVVSDDSHPEIREIRLVLR 546
Query: 504 TL 505
+
Sbjct: 547 EM 548
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 175/477 (36%), Positives = 274/477 (57%), Gaps = 17/477 (3%)
Query: 43 HLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP----WN 98
H+Y++HA++ +G N L+ L+ C S+ +L+YARSI D + P +N
Sbjct: 3 HIYKLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIF-----DLIAFPDTFAFN 57
Query: 99 NLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
+IR +A P ++ +F M G+ P FT+PFVLKACA L G+ + + + K
Sbjct: 58 TIIRAHA-DSSPSFSLSLFSKMAMAGVSPDHFTFPFVLKACAR---LQTGLDLHSLLFKL 113
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
G DSDVY N L+ FYG C A KVF++M ER +VSW+ +I +N + EA+ F
Sbjct: 114 GFDSDVYVQNGLIHFYGCCGFLDFALKVFEEMPERDLVSWSSMIACFAKNGFGYEALALF 173
Query: 219 VKMKDLG-FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
+M+ +G +PDE +L V+SA + LG+L LGKW+ + G LGTAL+DM+++
Sbjct: 174 QRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSR 233
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CG + + +F M E NV TW+A+I GLA HG + EAL +F M+N P++VTF GV
Sbjct: 234 CGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGV 293
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
L AC+H G+V +G+ F + + +G++P+ HY M D+L RAG L EA F+ MP +P
Sbjct: 294 LVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRP 353
Query: 398 NPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSN 457
N I+ R LL A H+ Y + + +V+ ++ EL+ + V+++N Y VG W + +
Sbjct: 354 NSIIWRTLLGACVNHN--YIE-LAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAG 410
Query: 458 VRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
VR M+ + K G S + + IH F +G ++ + I + L ++ +KV+ +
Sbjct: 411 VRNSMREKRISKKPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSMIDSLKVVGY 467
>gi|297837569|ref|XP_002886666.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
gi|297332507|gb|EFH62925.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 194/521 (37%), Positives = 280/521 (53%), Gaps = 20/521 (3%)
Query: 7 PTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKEL 66
P + HI P S S + R+ LS + C L Q+HA + ++ L
Sbjct: 9 PLSPHI-QPANSPSASTAGNHHRRILSLAETCSDMSQLKQLHAFTLRTTYPDEPATLFLY 67
Query: 67 VRFCTLSSS-KNLTYARSILCNYVNDSVPIPWNNLIRGYAWS-DRPREAVWVFIDMKRRG 124
+ LSSS ++ YA + + N S WN LIR A R EA ++ M RG
Sbjct: 68 GKILQLSSSFSDVNYAFRVFDSIENHS-SFMWNTLIRACAHDVSRKEEAFMLYRKMLERG 126
Query: 125 -IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDA 183
P + T+PFVLKACA I GL+EG QV + K G DVY NN L+ FYGSC A
Sbjct: 127 ESAPDKHTFPFVLKACAYIFGLSEGKQVHCQIVKHGFSGDVYVNNGLIHFYGSCGCLDLA 186
Query: 184 CKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
KVFD+M ERS+VSWN +I V A+ F M+ FEPD TM VLSAC L
Sbjct: 187 RKVFDEMPERSLVSWNSMIDALVRVGEYDSALQLFRDMQK-SFEPDGYTMQSVLSACAGL 245
Query: 244 GNLSLGKWVHLQLIERGTV---LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
G+LSLG W H+ L+ V ++ + +LI+MY KCG++ A +F M + ++ +W+
Sbjct: 246 GSLSLGTWSHVFLLRNCDVDVAMDVLIKNSLIEMYCKCGSLRMAEQVFQGMRKHDLASWN 305
Query: 301 AMILGLAQHGYAEEALELFSNM--KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
AMILG A HG AEEA+ F M + ++ PN VTF+ +L ACNH GMV G +YF M
Sbjct: 306 AMILGFATHGKAEEAMNCFDCMVKEGKNVKPNSVTFVALLIACNHRGMVNKGRQYFDMMV 365
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD 418
+GI+P HY + D+LARAG++ EA +M+MP +P+ ++ R+LL A A +
Sbjct: 366 REYGIEPALEHYGCIIDLLARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVE- 424
Query: 419 GVGNEVRRRLL-ELEPRGSQN------LVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMK 471
+ E+ R ++ +E S N V+++ YA W V VR+ M + G++K
Sbjct: 425 -LSEEIARNIIGTMEDNQSSNSNCSGAYVLLSRVYASANRWNDVGIVRKLMSDHGIRKEP 483
Query: 472 GMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVL 512
G S +E+ G + F++G S + IYQ L+ ++ ++ +
Sbjct: 484 GCSSIEINGISNEFFAGDTSHPQTKQIYQQLKVIDDRLRSI 524
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 244/422 (57%), Gaps = 13/422 (3%)
Query: 91 DSVPIP----WNNLIRGY-AWSDRPREAVWVFIDMKRRGI-KPTEFTYPFVLKACAEISG 144
D +P P +N+LIR A P A+ V+ M R G +P FT F LKACA +
Sbjct: 84 DQIPDPTAFCYNSLIRALPAAGSAP--ALAVYRRMLRAGSPRPNSFTLAFALKACAAVPA 141
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC-ERSVVSWNVIIT 203
EG Q+ A + GL + Y L+ Y C + A VFD M ++++V+W+ +++
Sbjct: 142 PGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDKNLVAWSAMVS 201
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
+ EA+G F +M+ +G EPDE TM+ V+SAC + G L LGKWVH + +G +
Sbjct: 202 GYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGITV 261
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
+ +L TALIDMYAKCG + AR +F M E + WSAMI+G A HG E+AL LFS M
Sbjct: 262 DLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRML 321
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+ PN VTF+GVL AC H+G+VEDG RY+ M+++ GIKP +Y M D+L R+G L
Sbjct: 322 ELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQNL-GIKPSMENYGCMVDLLCRSGLL 380
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
+AY+F++ MP PN ++ R LL A + + + +RLLELEP +N V+++
Sbjct: 381 DDAYSFVIGMPVSPNSVIWRTLLVACK---SSNRIDIAESATKRLLELEPHNPENYVLLS 437
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N YA W++VS +RR MK + + G S +E+ G +H F DS E+ I +L
Sbjct: 438 NLYASNSQWDRVSYLRRKMKGKNVTAIAGRSSIEINGHLHEFVVSDDSHPEIREIRLVLR 497
Query: 504 TL 505
+
Sbjct: 498 EM 499
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 163/420 (38%), Positives = 232/420 (55%), Gaps = 3/420 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN+++ GY + P +A+ VF M GI PT T L ACA++ L G V
Sbjct: 315 VSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKF 374
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V + L SD+ N+L+ Y C+R A +F+++ R+ VSWN +I +N + EA
Sbjct: 375 VDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEA 434
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +MK LG +PD TM+ V+ A EL KW+H +I N + TAL+DM
Sbjct: 435 LNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDM 494
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCGA+ AR LF + + +V TW+AMI G HG AL+LF MK ++ PN +T+
Sbjct: 495 YSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITY 554
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
L V+ AC+H+G+V++G R+F M+ +G++P HY M D+L RAG +KEA+ FI NMP
Sbjct: 555 LSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMP 614
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
P V A A IH VG + ++L EL P V++AN YA W K
Sbjct: 615 ISPGITVYGAXXGACKIHK---NIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSK 671
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
V+ VR+ M+ GLKK G S VEL +H FYSG + + IY LE L +K +
Sbjct: 672 VAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGY 731
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 172/323 (53%), Gaps = 4/323 (1%)
Query: 34 FLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSV 93
L+LC S K L+QI + +GL N+ +LV + S N AR + ++D +
Sbjct: 55 LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSIN-EAAR--VFEPIDDKL 111
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
++ +++GYA + A+ M+ +KP + + ++LK C + + L G ++
Sbjct: 112 DALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHG 171
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+ + ++V+ +V Y CR+ DA K+FD M ER +VSWN II +N + +
Sbjct: 172 QLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKK 231
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
A+ ++M+D G PD T++ VL A ++G L +GK +H I G + TAL D
Sbjct: 232 ALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALAD 291
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MY+KCG+V ARL+F M++ V +W++M+ G Q+G E+A+ +F M I P VT
Sbjct: 292 MYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVT 351
Query: 334 FLGVLCACNHAGMVEDGYRYFHE 356
+ L AC G +E G ++ H+
Sbjct: 352 IMEALHACADLGDLERG-KFVHK 373
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 128/246 (52%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I G++ + ++A+ + + M+ G +P T VL A A++ L G +
Sbjct: 214 VSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGY 273
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
++G V + L Y C A +FD M +++VVSWN ++ V+N +A
Sbjct: 274 AIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKA 333
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F KM + G +P T++ L AC +LG+L GK+VH + + + + +LI M
Sbjct: 334 IAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISM 393
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KC V A +F+ + +W+AMILG AQ+G EAL FS MK+ + P+ T
Sbjct: 394 YSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTM 453
Query: 335 LGVLCA 340
+ V+ A
Sbjct: 454 VSVIPA 459
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 113/237 (47%), Gaps = 6/237 (2%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H + L +D ++ L+ S K + A I N +N + WN +I GYA
Sbjct: 371 VHKFVDQLNLGSDISVMNSLISM--YSKCKRVDIASDIF-NNLNGRTHVSWNAMILGYAQ 427
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+ R EA+ F +MK G+KP FT V+ A AE+S + + +S LD +++
Sbjct: 428 NGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFV 487
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
LV Y C A K+FD + +R V++WN +I + A+ F KMK
Sbjct: 488 TTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAV 547
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG--TALIDMYAKCGAV 281
EP++ T L V+SAC+ G + G H + +++ L + A++D+ + G +
Sbjct: 548 EPNDITYLSVISACSHSGLVDEG-LRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRI 603
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 96/232 (41%), Gaps = 19/232 (8%)
Query: 19 NCNSDLLSKARQCLSF--------LKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFC 70
NC S++ S + SF L +H IH I S L + + LV
Sbjct: 436 NCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDM- 494
Query: 71 TLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEF 130
S + AR + + ++D I WN +I GY R A+ +F MK+ ++P +
Sbjct: 495 -YSKCGAIHMARKLF-DMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDI 552
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKS-GLDSDVYTNNNLVRFYGSCRRKRDACKVFDD 189
TY V+ AC+ ++EG++ ++ + GL+ + +V G R ++A ++
Sbjct: 553 TYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIEN 612
Query: 190 M-CERSVVSWNVIITVCV--ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
M + + C +N+ +GE K PDE V+L+
Sbjct: 613 MPISPGITVYGAXXGACKIHKNIEVGEKAA----KKLFELNPDEGGYHVLLA 660
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 185/510 (36%), Positives = 262/510 (51%), Gaps = 41/510 (8%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+S L C + Q+HA I +GL + +L +L+R T +Y + VN
Sbjct: 46 MSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVF-GQVNY 104
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
P W +IRGYA E+ + M+R G+ P FT+ + KAC ++ G QV
Sbjct: 105 PNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQV 164
Query: 152 QAN-VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWN----------- 199
A + G SD+Y N+++ Y C A KVFD+M ER VVSW
Sbjct: 165 HAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGD 224
Query: 200 --------------------VIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
++T +N EA+ YF KM+D+G E DE T+ V+SA
Sbjct: 225 MESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISA 284
Query: 240 CTELGNLSLGKWVHLQLIER---GTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINV 296
C +LG + W+ + ER G N +G+ALIDMY+KCG+ A +F M+E NV
Sbjct: 285 CAQLGAVKHANWIR-DIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNV 343
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
+++S+MILG A HG A AL+LF +M + I PN VTF+G+L AC+HAG+VE G + F +
Sbjct: 344 FSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAK 403
Query: 357 MEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKY 416
ME G+ P HY M D+L RAG L+EA + MP +PN V ALL A IH
Sbjct: 404 MEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHG--- 460
Query: 417 QDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWV 476
+ L +LEP G N ++++N YA G WE+VS +R+ ++ G KK G SW
Sbjct: 461 NPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWF 520
Query: 477 E-LGGSIHRFYSGYDSQVELAGIYQILETL 505
E G IH F++G + + I Q L+ L
Sbjct: 521 EGKNGEIHDFFAGDTTHPRSSEIRQALKQL 550
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 185/510 (36%), Positives = 262/510 (51%), Gaps = 41/510 (8%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+S L C + Q+HA I +GL + +L +L+R T +Y + VN
Sbjct: 46 MSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVF-GQVNY 104
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
P W +IRGYA E+ + M+R G+ P FT+ + KAC ++ G QV
Sbjct: 105 PNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQV 164
Query: 152 QAN-VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWN----------- 199
A + G SD+Y N+++ Y C A KVFD+M ER VVSW
Sbjct: 165 HAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGD 224
Query: 200 --------------------VIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
++T +N EA+ YF KM+D+G E DE T+ V+SA
Sbjct: 225 MESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISA 284
Query: 240 CTELGNLSLGKWVHLQLIER---GTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINV 296
C +LG + W+ + ER G N +G+ALIDMY+KCG+ A +F M+E NV
Sbjct: 285 CAQLGAVKHANWIR-DIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNV 343
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
+++S+MILG A HG A AL+LF +M + I PN VTF+G+L AC+HAG+VE G + F +
Sbjct: 344 FSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAK 403
Query: 357 MEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKY 416
ME G+ P HY M D+L RAG L+EA + MP +PN V ALL A IH
Sbjct: 404 MEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHG--- 460
Query: 417 QDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWV 476
+ L +LEP G N ++++N YA G WE+VS +R+ ++ G KK G SW
Sbjct: 461 NPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWF 520
Query: 477 E-LGGSIHRFYSGYDSQVELAGIYQILETL 505
E G IH F++G + + I Q L+ L
Sbjct: 521 EGKNGEIHDFFAGDTTHPRSSEIRQALKQL 550
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 187/541 (34%), Positives = 284/541 (52%), Gaps = 50/541 (9%)
Query: 1 MVRFPVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDA 60
M R P P TN PSN Q LS C + +HL Q+HAQI ++ +
Sbjct: 54 MSRTPNPLTN-----PPSN---------PQILSLFNPCKTLRHLKQVHAQI-ITHHNSPF 98
Query: 61 QILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDM 120
Q+ L YA++I +++ + P +N+LIR + S P EA+ ++ M
Sbjct: 99 QLSALASLSALSPFPTFLAYAKTIF-HHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTM 157
Query: 121 KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRK 180
+ G+KP TYPFV+KAC E S G+ V +V KSG + D Y ++L+ Y + +
Sbjct: 158 LQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDL 217
Query: 181 RDACKVFDDMCERSVVSWNVIITVCVENLWLG---------------------------- 212
A ++F+ R VVSWN +I V+++ +G
Sbjct: 218 GAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICG 277
Query: 213 ---EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
EA+ F +M+ +G +P E T++ +LSAC LG L G +H + + +N +GT
Sbjct: 278 KPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGT 337
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
AL+DMYAKCG + A +F+ ME +V W+ +I G+A HG +EA +LF MK + + P
Sbjct: 338 ALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEP 397
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
N +TF+ +L AC+HAGMV++G + M +GI+P HY + D+LARAG L+EA
Sbjct: 398 NDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMEL 457
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
I MP +PNP L ALL IH ++ +G V +RL+ L+P S ++++N YA
Sbjct: 458 IGTMPMEPNPSALGALLGGCRIH-GNFE--LGEMVGKRLINLQPCHSGRYILLSNIYAAA 514
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
W+ VR MK G+ K+ G+S +EL G +HRF +G S E IY+ L ++ +
Sbjct: 515 KKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRL 574
Query: 510 K 510
K
Sbjct: 575 K 575
>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 191/523 (36%), Positives = 277/523 (52%), Gaps = 20/523 (3%)
Query: 7 PTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKEL 66
P + HI PP S S + ++ S + C L Q+HA + + L
Sbjct: 19 PLSPHI-PPASSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLY 77
Query: 67 VRFCTLSSS-KNLTYARSILCNYVNDSVPIPWNNLIRGYAWS-DRPREAVWVFIDMKRRG 124
+ LSSS ++ YA + + N S WN LIR A R EA ++ M RG
Sbjct: 78 GKILQLSSSFSDVNYAFRVFDSIENHS-SFMWNTLIRACAHDVSRKEEAFMLYRKMLERG 136
Query: 125 -IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDA 183
P + T+PFVLKACA I G +EG QV + K G DVY NN L+ YGSC A
Sbjct: 137 ESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLA 196
Query: 184 CKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
KVFD+M ERS+VSWN +I V A+ F +M+ FEPD TM VLSAC L
Sbjct: 197 RKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGL 255
Query: 244 GNLSLGKWVHLQLIERGTV---LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
G+LSLG W H L+ + V ++ + +LI+MY KCG++ A +F M++ ++ +W+
Sbjct: 256 GSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWN 315
Query: 301 AMILGLAQHGYAEEALELFSNM--KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
AMILG A HG AEEA+ F M K ++ PN VTF+G+L ACNH G V G +YF M
Sbjct: 316 AMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMV 375
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD 418
+ I+P HY + D++ARAG++ EA +M+MP +P+ ++ R+LL A A +
Sbjct: 376 RDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVE- 434
Query: 419 GVGNEVRRRLLEL-EPRGSQN------LVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMK 471
+ E+ R ++ E S N V+++ YA W V VR+ M G++K
Sbjct: 435 -LSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEP 493
Query: 472 GMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
G S +E+ G H F++G S + IYQ L+ ++ ++ + +
Sbjct: 494 GCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGY 536
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 174/477 (36%), Positives = 273/477 (57%), Gaps = 17/477 (3%)
Query: 43 HLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP----WN 98
H+Y++HA++ +G N L+ L+ C S+ +L+YARSI D + P +N
Sbjct: 3 HIYKLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIF-----DLIAFPDTFAFN 57
Query: 99 NLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
+IR +A P ++ +F M G+ P FT+PFVLKACA L G+ + + + K
Sbjct: 58 TIIRAHA-DSSPSFSLSLFSKMTMAGVSPDHFTFPFVLKACAR---LQTGLDLHSLLFKL 113
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
G DSDVY N L+ FYG C A K F++M ER +VSW+ +I +N + EA+ F
Sbjct: 114 GFDSDVYVQNGLIHFYGCCGFLDFALKAFEEMPERDLVSWSSMIACFAKNGFGYEALALF 173
Query: 219 VKMKDLG-FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
+M+ +G +PDE +L V+SA + LG+L LGKW+ + G LGTAL+DM+++
Sbjct: 174 QRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSR 233
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CG + + +F M E NV TW+A+I GLA HG + EAL +F M+N P++VTF GV
Sbjct: 234 CGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGV 293
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
L AC+H G+V +G+ F + + +G++P+ HY M D+L RAG L EA F+ MP +P
Sbjct: 294 LVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRP 353
Query: 398 NPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSN 457
N I+ R LL A H+ Y + + +V+ ++ EL+ + V+++N Y VG W + +
Sbjct: 354 NSIIWRTLLGACVNHN--YIE-LAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAG 410
Query: 458 VRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
VR M+ + K G S + + IH F +G ++ + I + L ++ +KV+ +
Sbjct: 411 VRNSMREKRISKKPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSMIDSLKVVGY 467
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 182/515 (35%), Positives = 266/515 (51%), Gaps = 48/515 (9%)
Query: 40 SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNN 99
S KHL +HA + GL D+ +L +++RF + N Y+ I ++ + +N
Sbjct: 22 SLKHLKHVHAALLRLGLDEDSYLLNKVLRFSF--NFGNTNYSHRIFHQTKEPNIFL-FNT 78
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
+I G +D +E++ ++ M++ G+ P FT+PF+LKACA + G+++ V K+G
Sbjct: 79 MIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAG 138
Query: 160 LDSDVYTNNNLVRFYGSC--------------------------------------RRKR 181
+SD + N +LV YG C R
Sbjct: 139 CESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFR 198
Query: 182 DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
AC VFD M E+ +VSW+ +I N EA+ F KM + GF PD M+ VL AC
Sbjct: 199 RACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACA 258
Query: 242 ELGNLSLGKWVHLQLIERGTVL-NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
LG L LG W L++R L N LGTALIDMYAKCG + A +F M + ++ W+
Sbjct: 259 RLGALELGNWAS-NLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWN 317
Query: 301 AMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHV 360
A I GLA G+ + A LF M+ S I P+ TF+G+LCAC HAG+V++G +YF+ ME V
Sbjct: 318 AAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERV 377
Query: 361 HGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH-DAKYQDG 419
+ P HY M D+L RAG L EA+ + +MP + N IV ALL +H D + +G
Sbjct: 378 FTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEG 437
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
V ++L+ LEP S N V+++N Y+ WE + +R M G+KK+ G SW+E+
Sbjct: 438 ----VLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVD 493
Query: 480 GSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
G +H F G S IY L L +K +
Sbjct: 494 GVVHEFLVGDTSHPLSEKIYAKLGELVKDLKASGY 528
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 182/483 (37%), Positives = 274/483 (56%), Gaps = 15/483 (3%)
Query: 29 RQCLSFLKLCCSKKHLY---QIHAQIQVSGLQNDAQIL-KELVRFCTLSSSKNLTYARSI 84
R C++ L+L + L QIHA+ +G+ +L K L+ + L YA ++
Sbjct: 13 RHCVALLRLHLAAPSLAAAKQIHARALRAGVPTSHPLLAKHLLFHLAALRAPPLRYAVAV 72
Query: 85 LCNYVNDSV--PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI 142
L + P P N ++R A S RPR A+ + +RR P TYP +++ACA +
Sbjct: 73 LSRLLPHGPLDPFPLNTVLRIAAGSPRPRVALELH---RRRLALPDTHTYPPLIQACARL 129
Query: 143 SGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC--ERSVVSWNV 200
L EG + A K+G + V+ N+LV YG+C A KVFD+M R++VSWN
Sbjct: 130 LALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNS 189
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
++ N E + F +M + F PD T++ VL+AC E G L+LG+ VH+ + + G
Sbjct: 190 MLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVG 249
Query: 261 TVLNCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEALELF 319
V N + ALID+YAKCG+V AR +F M V +W+++I+GLA +G+ +EALELF
Sbjct: 250 LVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELF 309
Query: 320 SNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILAR 379
S M+ + P +T +GVL AC+H G+V+DG+RYF M+ +GI P H M D+L R
Sbjct: 310 SLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGR 369
Query: 380 AGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNL 439
AG ++EAY +I+ MP +PN +V R LL + ++H + +G RL+EL+P S +
Sbjct: 370 AGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHK---KLELGKVAWERLVELDPGHSGDY 426
Query: 440 VIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIY 499
V+++N YA VGMW V +R+ M ++K G S VEL S++ F G S E IY
Sbjct: 427 VLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVELRNSVYEFVMGDRSHPESEQIY 486
Query: 500 QIL 502
++L
Sbjct: 487 EML 489
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/488 (36%), Positives = 264/488 (54%), Gaps = 38/488 (7%)
Query: 59 DAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFI 118
D IL LVRF + +L+ A + V + WN++I +A + P +A+ +F+
Sbjct: 160 DLYILNSLVRF--YGACGDLSMAERLFKGISCKDV-VSWNSMISAFAQGNCPEDALELFL 216
Query: 119 DMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCR 178
M+R + P T VL ACA+ L G V + + + G+ D+ N ++ Y C
Sbjct: 217 KMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCG 276
Query: 179 RKRDACKVFDDMCERSVVSW-------------------------------NVIITVCVE 207
DA K+FD+M ER V SW NV+I+ +
Sbjct: 277 SVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQ 336
Query: 208 NLWLGEAVGYFVKMKDLGF-EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
N EA+ F +++ +PDE T++ LSAC +LG + LG W+H+ + G VLNC
Sbjct: 337 NGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCH 396
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
L ++L+DMYAKCG++ A +F +EE +V+ WSAMI GL HG + A++LF M+ +
Sbjct: 397 LISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAK 456
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+ PN VTF VLCAC+HAG+V++G +FHEME V+G+ P HY M DIL RAG L+EA
Sbjct: 457 VKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEA 516
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKY 446
I M P+ V ALL A S+H +G +LL+LEPR +V+++N Y
Sbjct: 517 MELINEMSTTPSASVWGALLGACSLH---MNVELGELASDQLLKLEPRNHGAIVLLSNIY 573
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
A+ G WEKVS +R+ M++ LKK G S +E G++H F G ++ + IY LE +
Sbjct: 574 AKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIA 633
Query: 507 LHMKVLNF 514
+K + +
Sbjct: 634 TKLKSVGY 641
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/406 (31%), Positives = 202/406 (49%), Gaps = 43/406 (10%)
Query: 18 SNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKN 77
S N++LL + Q LS + C S K L ++HA++ +GL D +L LSS
Sbjct: 15 STLNNNLLFRNHQILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFST 74
Query: 78 LTYARSILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIK-PTEFTY 132
L YAR++ D +P P WN LIR YA S P ++ +F+D+ + P +FT+
Sbjct: 75 LDYARNLF-----DQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTF 129
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
PFV+KA +E+ G V K D+Y N+LVRFYG+C A ++F +
Sbjct: 130 PFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISC 189
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
+ VVSWN +I+ + +A+ F+KM+ P+ TM+ VLSAC + +L G+WV
Sbjct: 190 KDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWV 249
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA----- 307
+ +G ++ L A++DMY KCG+V A+ LF M E +V++W+ M+ G A
Sbjct: 250 CSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDY 309
Query: 308 --------------------------QHGYAEEALELFSNMKNSSIS-PNYVTFLGVLCA 340
Q+G +EAL +F+ ++ S I+ P+ VT + L A
Sbjct: 310 DAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSA 369
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
C G ++ G + H GI ++ D+ A+ G L++A
Sbjct: 370 CAQLGAIDLG-GWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKA 414
>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 191/523 (36%), Positives = 277/523 (52%), Gaps = 20/523 (3%)
Query: 7 PTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKEL 66
P + HI PP S S + ++ S + C L Q+HA + + L
Sbjct: 28 PLSPHI-PPASSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLY 86
Query: 67 VRFCTLSSS-KNLTYARSILCNYVNDSVPIPWNNLIRGYAWS-DRPREAVWVFIDMKRRG 124
+ LSSS ++ YA + + N S WN LIR A R EA ++ M RG
Sbjct: 87 GKILQLSSSFSDVNYAFRVFDSIENHS-SFMWNTLIRACAHDVSRKEEAFMLYRKMLERG 145
Query: 125 -IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDA 183
P + T+PFVLKACA I G +EG QV + K G DVY NN L+ YGSC A
Sbjct: 146 ESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLA 205
Query: 184 CKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
KVFD+M ERS+VSWN +I V A+ F +M+ FEPD TM VLSAC L
Sbjct: 206 RKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGL 264
Query: 244 GNLSLGKWVHLQLIERGTV---LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
G+LSLG W H L+ + V ++ + +LI+MY KCG++ A +F M++ ++ +W+
Sbjct: 265 GSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWN 324
Query: 301 AMILGLAQHGYAEEALELFSNM--KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
AMILG A HG AEEA+ F M K ++ PN VTF+G+L ACNH G V G +YF M
Sbjct: 325 AMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMV 384
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD 418
+ I+P HY + D++ARAG++ EA +M+MP +P+ ++ R+LL A A +
Sbjct: 385 RDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVE- 443
Query: 419 GVGNEVRRRLLEL-EPRGSQN------LVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMK 471
+ E+ R ++ E S N V+++ YA W V VR+ M G++K
Sbjct: 444 -LSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEP 502
Query: 472 GMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
G S +E+ G H F++G S + IYQ L+ ++ ++ + +
Sbjct: 503 GCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGY 545
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 180/531 (33%), Positives = 273/531 (51%), Gaps = 52/531 (9%)
Query: 14 PPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLS 73
PP S+ + L L L C + L Q H+QI GL D + +++FC +S
Sbjct: 11 PPSLSSAKAHKLP-----LYGLDSCSTMAELKQYHSQIIRLGLSADNDAMGRVIKFCAIS 65
Query: 74 SSKNLTYARSILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTE 129
S +L YA + D +P P +N + RGY R ++++ M + + P +
Sbjct: 66 KSGDLNYALEVF-----DKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNK 120
Query: 130 FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD 189
FTYP +++AC + EG Q+ A+V K G +D ++ NNL+ Y + + A +VFD+
Sbjct: 121 FTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDN 180
Query: 190 MCERSVVSW-------------------------------NVIITVCVENLWLGEAVGYF 218
M +R VVSW N +I V++ L EA F
Sbjct: 181 MPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALF 240
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
+M+ D+ +LSACT LG L GKW+H + + G L+ +L T +IDMY KC
Sbjct: 241 DRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKC 300
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
G + A +F+ + + + +W+ MI GLA HG E A+ELF M+ ++P+ +TF+ VL
Sbjct: 301 GCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVL 360
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
AC H+G+VE+G YF M V G+KP H+ M D+L RAG L+EA I MP P+
Sbjct: 361 SACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPD 420
Query: 399 PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
VL AL+ A IH +G ++ ++++ELEP S V++AN YA G WE V+ V
Sbjct: 421 AGVLGALVGACRIHG---NTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKV 477
Query: 459 RRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIY----QILETL 505
R+ M + G+KK G S +E + F +G + + IY +ILET+
Sbjct: 478 RKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETI 528
>gi|449452775|ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
gi|449493602|ref|XP_004159370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/520 (34%), Positives = 276/520 (53%), Gaps = 39/520 (7%)
Query: 24 LLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARS 83
+ + + Q S L C HLYQIH + L D L + + CT S +YA S
Sbjct: 20 IFTSSLQFTSLLSNCRHHLHLYQIHGFMLHRALDQDNLFLSQFIDACT--SLGLSSYAFS 77
Query: 84 ILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS 143
I N + + + +N I+ + + P A+W++ ++ G++P ++ P VLKA ++S
Sbjct: 78 IFSNKTHPDLRL-YNTAIKALSKTSSPINAIWLYTRIRIDGLRPDSYSIPSVLKAVVKLS 136
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD--------------- 188
+ G Q+ S LD DV +L++ Y SC DA K+FD
Sbjct: 137 AVEVGRQIHTQTVSSALDMDVNVATSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVA 196
Query: 189 ----------------DMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETT 232
+M +R+V+SW +I + EA+ F KM+ EPDE
Sbjct: 197 GYVKVGELKSARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIELFRKMQLEEVEPDEIA 256
Query: 233 MLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME 292
ML VLSAC +LG L LG+W+H + + G L ALIDMYAK G + A +F M+
Sbjct: 257 MLAVLSACADLGALELGEWIHNYIEKHGLCRIVSLYNALIDMYAKSGNIRRALEVFENMK 316
Query: 293 EINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR 352
+ +V TWS +I LA HG EA+++F M+ + + PN VTF+ +L AC+H GMV+ G
Sbjct: 317 QKSVITWSTVIAALALHGLGGEAIDMFLRMEKAKVRPNEVTFVAILSACSHVGMVDVGRY 376
Query: 353 YFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
YF +M+ ++ I+P HY M D+LARAG+L+EA + +MPF+ N ++ +LL+AS+ H
Sbjct: 377 YFDQMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAMIWGSLLAASNTH 436
Query: 413 -DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMK 471
DA+ + + L +LEP S N V+++N YA +G W + VR+ M+N G+KK
Sbjct: 437 RDAE----LAQLALKHLAKLEPGNSGNYVLLSNTYAALGKWNESGTVRKLMRNAGVKKAP 492
Query: 472 GMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
G S +E+ ++ F +G S ++ IY +L + L +K+
Sbjct: 493 GGSVIEINNIVYEFLAGDMSDSQVHEIYHVLCKIILQLKM 532
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 183/518 (35%), Positives = 279/518 (53%), Gaps = 45/518 (8%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW 97
C + +HL QIHA +G + EL++F TLS+ + + YAR ++ W
Sbjct: 25 CKTTRHLKQIHAHFIKTGQIHHPLAAAELLKFLTLSTQREIKYARKFFSQ-IHHPNCFSW 83
Query: 98 NNLIRGYA-------WSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEISGLNEGM 149
N +IR A + EA+ F M G ++P +FT+P VLKACA+++ + EG
Sbjct: 84 NTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIEEGK 143
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDAC------------------------- 184
Q+ V K GL SD + +NLVR Y C +DA
Sbjct: 144 QLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGYVRM 203
Query: 185 -------KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVL 237
++FD M +SVVSWNV+I+ C +N EA+ F M+ P+ T++ VL
Sbjct: 204 GDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVL 263
Query: 238 SACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME-EINV 296
A + LG + LGKWVHL + ++ LG+ALIDMY+KCG++ A +F + + N
Sbjct: 264 PAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNP 323
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
TWSA+I GLA HG A +AL+ F M+ + ++P+ V ++GVL AC+HAG+VE+G ++
Sbjct: 324 ITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSIYYH 383
Query: 357 MEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKY 416
M ++ G+ P HY M D+L RAG L+EA I+NMP +P+ ++L+ALL A +H
Sbjct: 384 MVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLGACKMHG--- 440
Query: 417 QDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWV 476
+G + + L+ P S + V ++N +A G WE V VR MK + ++K G SW+
Sbjct: 441 NIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKMKELDIRKDPGCSWI 500
Query: 477 ELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
EL G IH F DS GI+ +LE ++ ++ + +
Sbjct: 501 ELDGVIHEFLVEDDSHPRAEGIHSMLEEMSDRLRSVGY 538
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 167/471 (35%), Positives = 265/471 (56%), Gaps = 9/471 (1%)
Query: 44 LYQIHAQIQVSGL--QNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
L Q+HA I L + A L ++V FC LS N+ YARS+ + ++ WN+LI
Sbjct: 4 LRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNI-FSWNSLI 62
Query: 102 RGYAW-SDRPREAVWVFIDMKRRGIK-PTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
+GY+ +E +++F + G P FT FVLKACA ++ EG+QV ++V K G
Sbjct: 63 KGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLKDG 122
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
S ++ +LV FYG C A KVF++M R++V+W +I+ + EA+ F
Sbjct: 123 FGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMELFR 182
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+M+ G +PD T++ V+SAC G L +G W+H + + + + +L TAL+DMYAKCG
Sbjct: 183 EMQKAGIQPDAMTLVSVVSACAVAGALDIGYWLHAYIEKYFVLTDLELSTALVDMYAKCG 242
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
+ A+ +F M + WS+MI+G A HG A++A++ F M + ++P++VTFL VL
Sbjct: 243 CIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAVLS 302
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
AC H G+V G R++ M GI+P HY D+L R+G ++EAY M PN
Sbjct: 303 ACAHGGLVSRGRRFWSLMLEF-GIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKIPPNA 361
Query: 400 IVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVR 459
R+LL K +G V R LLELEP ++N ++++N Y+ + WEK+S +R
Sbjct: 362 ATWRSLLMGCK---KKKLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELR 418
Query: 460 RFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+ MK +K + G S +E+ G +H F G S E+ + + +E +++ ++
Sbjct: 419 KVMKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVR 469
>gi|296086445|emb|CBI32034.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 185/489 (37%), Positives = 265/489 (54%), Gaps = 19/489 (3%)
Query: 21 NSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTY 80
NSD + R+ L FL C L Q+HAQ + + R SS +L Y
Sbjct: 19 NSDSFTHHRRLLLFLNSCTCISQLKQLHAQTIRTTSSHHPNTFFLYSRILHFSSLHDLRY 78
Query: 81 ARSILCNYVNDSVPIPWNNLIRGYAWS-DRPREAVWVFIDMKRRG-IKPTEFTYPFVLKA 138
A + + + + WN LIR A S DR + A+ ++ M +G + + T+PFVLKA
Sbjct: 79 AFRVF-HQIENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFVLKA 137
Query: 139 CAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSW 198
CA + L+EG Q+ A + K G DSDVY NN+LV FY +C R A VFD M ERS+VSW
Sbjct: 138 CAYLFALSEGEQIHAQILKLGFDSDVYINNSLVHFYATCDRLDFAKGVFDRMSERSLVSW 197
Query: 199 NVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
NV+I V A+ F +M+ FEPD T+ + +AC +G+LSL
Sbjct: 198 NVVIDAFVRFGEFDAALNLFGEMQKF-FEPDGYTIQSIANACAGMGSLSL---------- 246
Query: 259 RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALEL 318
G V + L T+L+DMY KCG++ A LF RM + +V +W++MILG + HG ALE
Sbjct: 247 -GIVNDVLLNTSLVDMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEY 305
Query: 319 FSNM-KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL 377
F M + + PN +TF+GVL ACNH G+V +G RYF M + IKP HY + D+L
Sbjct: 306 FGCMVRTEKLMPNAITFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLL 365
Query: 378 ARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
ARAG + EA + NMP +P+ ++ R+LL A +A + + E+ RR+LE E
Sbjct: 366 ARAGLIDEALDVVSNMPMRPDLVIWRSLLDACCKQNAGVE--LSEEMARRVLEAEGGVCS 423
Query: 438 NL-VIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELA 496
+ V+++ YA W V VR+ M + G+ K G S +E+ G H F++G S +
Sbjct: 424 GVYVLLSRVYASASRWNDVGMVRKLMTDKGVVKEPGCSSIEIDGVAHEFFAGDTSHPQTE 483
Query: 497 GIYQILETL 505
IY L+ +
Sbjct: 484 EIYSALDVI 492
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 181/486 (37%), Positives = 269/486 (55%), Gaps = 21/486 (4%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKN-LTYARSILCNYVND-SVPI 95
C + L QIHA I +GLQN+ IL +F + SS+ N + YA S L + S P
Sbjct: 28 CNTLSKLTQIHAFILKTGLQNNPLIL---TKFTSTSSNLNSIHYATSFLFPPSHTTSTPT 84
Query: 96 P------WNNLIRGYAWSDRPREAVWVFI-DMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
P +N LIR Y+ + + ++F M R G+ P +FT+PFVLK CA I L G
Sbjct: 85 PSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLG 144
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRD----ACKVFDDMCERSVVSWNVIITV 204
V V K G + DV+ N L+ Y C D A KVFDD + V+W+ +I
Sbjct: 145 KCVHGCVVKFGFEEDVHVLNTLIHMY--CCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAG 202
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
V AV F +M+ +G PDE TM+ VLSAC +LG L LGKWV + ++ +
Sbjct: 203 FVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKS 262
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+L ALIDM+AKCG V A LF +M+ + +W+++I GLA HG +A+ LF M
Sbjct: 263 VELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVE 322
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ I+P+ V F+GVL AC+H+G+V+ G YF ME I P HY M D+L R G +K
Sbjct: 323 NGITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVK 382
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
EA+ F+ MPF+PN I+ R +++A A + +G + + L++ EP N V+++N
Sbjct: 383 EAFEFVQKMPFEPNQIIWRTIITACH---ATGELKLGESISKELIKSEPMHESNYVLLSN 439
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILET 504
YA++ WEK + VR M G+KK+ G + +E+ ++ F +G S + IY++++
Sbjct: 440 IYAKLRQWEKKTKVREMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDE 499
Query: 505 LNLHMK 510
+ +K
Sbjct: 500 MGREIK 505
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 178/494 (36%), Positives = 271/494 (54%), Gaps = 24/494 (4%)
Query: 30 QCLSFLKLCCSKKH-LYQIHA-QIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILC- 86
+C+ L+ C S KH L IHA I+ L N+ + K L+ F +S S ++YA ++
Sbjct: 20 KCIYLLQFCASSKHKLRXIHAFSIRHGVLLNNPDMGKHLI-FTIVSLSAPMSYAYNVFTW 78
Query: 87 ---------NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLK 137
+++ WN + RGYA SD P A+ + M I+P TYPF+LK
Sbjct: 79 VLSYAYNVFTMIHNPNVFTWNTMTRGYAESDNPSPALRFYRQMIVSRIEPDTHTYPFLLK 138
Query: 138 ACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS 197
A ++ + EG + + ++G +S V+ N+L+ Y +C A VF+ M +R +V+
Sbjct: 139 AISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAHNVFELMRDRDLVA 198
Query: 198 WNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLI 257
+I N EA+ F +M G EPD T++ +LSA ELG L LG+ VH+ L+
Sbjct: 199 XISVINGFALNGRPSEALTLFREMSAEGVEPDGFTVVSLLSASAELGALELGRRVHVYLL 258
Query: 258 ERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALE 317
+ G N + +L+D+YAKC A+ E N +W+++I+GLA +G+ EEALE
Sbjct: 259 KVGLRENSHVTNSLLDLYAKCDAIW--------EXERNAVSWTSLIVGLAVNGFGEEALE 310
Query: 318 LFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL 377
LF M+ + P+ +TF+GVL AC+H GM+++G+ YF M+ GI P HY M D+L
Sbjct: 311 LFREMEGQGLVPSEITFVGVLYACSHCGMLDEGFDYFRRMKEEFGIMPRIEHYGCMVDLL 370
Query: 378 ARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
+RAG +K+AY +I NMP QPN + R LL A +IH G+G R LL+LEP+ S
Sbjct: 371 SRAGLVKQAYEYIQNMPVQPNAVTWRTLLGACTIHG---HLGLGETARSHLLKLEPKHSG 427
Query: 438 NLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAG 497
+ V+++N Y W V +RR M G+KK G S VELG ++ F G S +
Sbjct: 428 DYVLLSNLYTSECRWADVQLIRRSMLKDGVKKTSGYSLVELGNRVYEFTMGNRSHPQSQD 487
Query: 498 IYQILETLNLHMKV 511
+Y +LE + +K+
Sbjct: 488 VYALLEKITELLKL 501
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 188/552 (34%), Positives = 284/552 (51%), Gaps = 78/552 (14%)
Query: 28 ARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILC 86
++ +S L+ + QIHA I + L + +L +L+R SS+ +L YARS+
Sbjct: 3 GKKVMSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVF- 61
Query: 87 NYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTE-FTYPFVLKACAE 141
D +P P WN +IR Y S P+E++ +F M+ + P + ++ V++AC
Sbjct: 62 ----DEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGR 117
Query: 142 ISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFY---GSCRRKRD---------------- 182
+ G ++ V K GL SD++ L+ Y G R+
Sbjct: 118 LKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVL 177
Query: 183 ------------ACKVFDDMCERSVVSWNVII-----------------TVCVENL--WL 211
A +FD M ER +VSWN +I C +L W
Sbjct: 178 LAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWS 237
Query: 212 G------------EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER 259
EA+ F +M+ PD+ TM+ VLSAC ++G L +GK +H + IER
Sbjct: 238 SMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIH-ECIER 296
Query: 260 GTV-LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALEL 318
+ ++ +LGT+L+DMYAKCG + + +F+ M +V+ WSAMI+GLA HG+ E AL+
Sbjct: 297 NRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDH 356
Query: 319 FSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILA 378
FS M + I PN VTF+GVL AC+H G+V++G+ YF M V+ + P HY + DIL
Sbjct: 357 FSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILG 416
Query: 379 RAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQN 438
RAG L+EA I +MPF P+ IV RALL A I+ + E LLELEP N
Sbjct: 417 RAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYK---NVEIAEEATVNLLELEPHVDGN 473
Query: 439 LVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGI 498
V+++N Y++ W+KV NVRR MKN+ ++K+ G S +E+ ++H F +G S E I
Sbjct: 474 YVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKI 533
Query: 499 YQILETLNLHMK 510
++L + +K
Sbjct: 534 LRMLSEITARLK 545
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 181/495 (36%), Positives = 278/495 (56%), Gaps = 17/495 (3%)
Query: 18 SNCNSDLLSKARQCLSFLKLCCSKKHLY---QIHAQI--QVSGLQNDAQIL-KELVRFCT 71
+ C + R C++ L+L + L Q+HA+ G+ +L K L+
Sbjct: 8 APCTHPAAAALRHCVALLRLHLASPSLATAKQLHARALRAAPGVTPSHPLLAKHLLFHLA 67
Query: 72 LSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTE-F 130
+ L YA ++L + P N ++R +A S RPR V + + RR + P +
Sbjct: 68 ALKAPPLRYAVAVLSGLLPSPDPFSLNTVLRIFASSARPR----VALALHRRHLAPPDTH 123
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
TYP +L+ACA + L G + A K+GL S V+ N+LV YG+C A +VFD++
Sbjct: 124 TYPPLLQACARLLALRYGEGLHAEACKNGLVSLVFVKNSLVHLYGACGLFESAHRVFDEI 183
Query: 191 C--ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSL 248
ER++VSWN ++ N E + F +M ++ F PD T++ VL+AC E+G L+L
Sbjct: 184 PPPERNLVSWNSVLNGFAANGRPNEVLTVFREMLEVEFAPDGFTVVSVLTACAEIGVLAL 243
Query: 249 GKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLA 307
G+ VH+ + + G V N G ALID+YAKCG V AR +F M V +W+++I+GLA
Sbjct: 244 GRRVHVFVAKVGLVGNAHAGNALIDLYAKCGGVDDARKMFGEMGVGRTVVSWTSLIVGLA 303
Query: 308 QHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
+G+ +AL+LFS M+ + P +T +GVL AC+H G+V+DG+RYF +M+ +GI P
Sbjct: 304 VNGFGMDALQLFSMMEREKLMPTEITMVGVLYACSHCGLVDDGFRYFDQMKAEYGITPRI 363
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRR 427
H M D+L RAG ++EA+ +I MP +PN +V R LL A ++H + +G R
Sbjct: 364 EHLGCMVDLLGRAGRVEEAHNYITTMPLEPNAVVWRTLLGACAMHK---KLEIGEAAWAR 420
Query: 428 LLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYS 487
L+EL+P S + V+++N YA VG W V +R+ M G++K G S VEL S++ F
Sbjct: 421 LVELDPGHSGDYVLLSNLYAGVGRWADVHVLRKTMVTHGVRKNPGHSLVELRNSVYEFVM 480
Query: 488 GYDSQVELAGIYQIL 502
G S E IY++L
Sbjct: 481 GDRSHPETDQIYEML 495
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 175/505 (34%), Positives = 272/505 (53%), Gaps = 37/505 (7%)
Query: 29 RQCLSFLKLCCSKKHLYQIHAQIQVSG-LQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
Q +S L+ C + L QIH Q+ G +++ + + L + ++ S NLTYAR + +
Sbjct: 12 EQTMSLLERCSNIGELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFS-NLTYARMVF-D 69
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
++ + WN +IR Y+ S+ P EA+ ++ M I +T+PF+LKAC+ +S L E
Sbjct: 70 RISSPNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAE 129
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFY---GSCRR---------KRD------------- 182
Q+ + K G S+VY N+L+R Y GS + RD
Sbjct: 130 THQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIK 189
Query: 183 ------ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVV 236
A K+F M E++V+SW +I V EA+ +M G +PD+ T+
Sbjct: 190 CGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCS 249
Query: 237 LSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINV 296
LSAC LG L GKW+H + + ++ LG ALIDMY KCG + A L+FS++E+ V
Sbjct: 250 LSACAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCV 309
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
+TW+A+I G A HG EAL+ F+ M+ + I P TF VL AC+H G+VE+G F
Sbjct: 310 YTWTAIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFES 369
Query: 357 MEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKY 416
M + +KP+ HY M D+L RAG LKEA F+ +MP +PN + +LL+A +H K+
Sbjct: 370 MSTFYNMKPVMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLH--KH 427
Query: 417 QDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWV 476
+ +G E+ + L+EL+P + +A+ +A G W++ S VR +KN GL + G S +
Sbjct: 428 LE-LGKEIGKFLIELDPEHDGRYIHLASIHAAAGEWDEASQVRSHIKNKGLLNLPGCSTI 486
Query: 477 ELGGSIHRFYSGYDSQVELAGIYQI 501
L G H F++G + + +Y +
Sbjct: 487 TLNGVAHEFFAGAEPHPHVREMYDM 511
>gi|359487598|ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Vitis vinifera]
Length = 603
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 171/487 (35%), Positives = 276/487 (56%), Gaps = 11/487 (2%)
Query: 24 LLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARS 83
+++ AR LS L+ C S + L++IHA I ++G Q++ I ++L+ FC +S S +L YA+
Sbjct: 19 MMANARAILSLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQL 78
Query: 84 ILCNYVNDSVPIPWNNLIRGYAWSDRPRE-AVWVFID--MKRRGIKPTEFTYPFVLKACA 140
+ N P WN++IRG++ S P + VF + + +P +T+ F+LKAC
Sbjct: 79 VFHRIHNPQTP-AWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACE 137
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
E + +V + + G D DV NL+R Y A KVF++M R +VSWN
Sbjct: 138 EAKEEGKCREVHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNS 197
Query: 201 IITVCVENLWLGEAVGYFVKMK--DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
+I+ + EA+ + +M+ ++GF D T++ +LS+C +G L +G +H E
Sbjct: 198 MISCYCQTGLHEEALKMYDQMRISNVGF--DGFTLVSLLSSCAHVGALHMGVQMHRFAGE 255
Query: 259 RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALEL 318
R V N +G ALIDMYAKCG++ A +F+ M + +V+TW++MI+G HG +EA+
Sbjct: 256 RRLVENIFVGNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITF 315
Query: 319 FSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILA 378
F +M + + PN +TFLG+LC C+H G+V++G +YFH M +KP HY M D+
Sbjct: 316 FGSMLMAGVRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFG 375
Query: 379 RAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQN 438
RAG LKEA I + P Q +P++ R LL + IH +G R L++L G+ +
Sbjct: 376 RAGKLKEALEVIRSSPSQHDPVLWRTLLGSCKIHR---NVEIGEMAMRNLVQLGSLGAGD 432
Query: 439 LVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGI 498
V+++ YAE + V+ +R+ +++ G+K G SW+E+G +HRF S + I
Sbjct: 433 CVLLSGIYAEAKDLQGVARMRKLIQSRGIKTTPGWSWIEVGDQVHRFVVDDKSHPDSREI 492
Query: 499 YQILETL 505
Y+ LE +
Sbjct: 493 YRKLEEV 499
>gi|296089864|emb|CBI39683.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 171/487 (35%), Positives = 276/487 (56%), Gaps = 11/487 (2%)
Query: 24 LLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARS 83
+++ AR LS L+ C S + L++IHA I ++G Q++ I ++L+ FC +S S +L YA+
Sbjct: 1 MMANARAILSLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQL 60
Query: 84 ILCNYVNDSVPIPWNNLIRGYAWSDRPRE-AVWVFID--MKRRGIKPTEFTYPFVLKACA 140
+ N P WN++IRG++ S P + VF + + +P +T+ F+LKAC
Sbjct: 61 VFHRIHNPQTP-AWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACE 119
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
E + +V + + G D DV NL+R Y A KVF++M R +VSWN
Sbjct: 120 EAKEEGKCREVHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNS 179
Query: 201 IITVCVENLWLGEAVGYFVKMK--DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
+I+ + EA+ + +M+ ++GF D T++ +LS+C +G L +G +H E
Sbjct: 180 MISCYCQTGLHEEALKMYDQMRISNVGF--DGFTLVSLLSSCAHVGALHMGVQMHRFAGE 237
Query: 259 RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALEL 318
R V N +G ALIDMYAKCG++ A +F+ M + +V+TW++MI+G HG +EA+
Sbjct: 238 RRLVENIFVGNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITF 297
Query: 319 FSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILA 378
F +M + + PN +TFLG+LC C+H G+V++G +YFH M +KP HY M D+
Sbjct: 298 FGSMLMAGVRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFG 357
Query: 379 RAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQN 438
RAG LKEA I + P Q +P++ R LL + IH +G R L++L G+ +
Sbjct: 358 RAGKLKEALEVIRSSPSQHDPVLWRTLLGSCKIHR---NVEIGEMAMRNLVQLGSLGAGD 414
Query: 439 LVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGI 498
V+++ YAE + V+ +R+ +++ G+K G SW+E+G +HRF S + I
Sbjct: 415 CVLLSGIYAEAKDLQGVARMRKLIQSRGIKTTPGWSWIEVGDQVHRFVVDDKSHPDSREI 474
Query: 499 YQILETL 505
Y+ LE +
Sbjct: 475 YRKLEEV 481
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 172/459 (37%), Positives = 249/459 (54%), Gaps = 6/459 (1%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H + +G ++ + LV S +++ AR I + ++ + WN++I GY
Sbjct: 153 VHGYVLRAGFESLVNVSTALVDM--YSKCGSVSIARVIF-DGMDHRTVVSWNSMIDGYVQ 209
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
S A+ +F M G++PT T L ACA++ L G V V + LDSDV
Sbjct: 210 SGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSV 269
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
N+L+ Y C+R A +F ++ +++VSWN +I +N + EA+ F +M+
Sbjct: 270 MNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNI 329
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
+PD TM+ V+ A EL KW+H +I R N + TAL+DMYAKCGA+ AR
Sbjct: 330 KPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARK 389
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
LF M +V TW+AMI G HG + ++ELF MK +I PN +TFL L AC+H+G+
Sbjct: 390 LFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGL 449
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALL 406
VE+G +F M+ +GI+P HY M D+L RAG L +A+ FI MP +P V A+L
Sbjct: 450 VEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAML 509
Query: 407 SASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVG 466
A IH K D +G + + +L P V++AN YA MW KV+ VR M+ G
Sbjct: 510 GACKIH--KNVD-LGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSG 566
Query: 467 LKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
L+K G S VE+G +H FYSG S + IY LETL
Sbjct: 567 LQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLETL 605
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 140/258 (54%), Gaps = 1/258 (0%)
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
+++GYA S A+ F MK ++P + + ++LK C + S L G ++ +V SG
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
+++ +V Y CR+ DA +FD M ER +V WN +I+ +N + A+ +
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+M + G PD T++ +L A + L +G VH ++ G + TAL+DMY+KCG
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
+V AR++F M+ V +W++MI G Q G AE A+ +F M + + P VT +G L
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240
Query: 340 ACNHAGMVEDGYRYFHEM 357
AC G +E G ++ H++
Sbjct: 241 ACADLGDLERG-KFVHKL 257
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 156/325 (48%), Gaps = 36/325 (11%)
Query: 34 FLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
LKLC L +IH + SG + + +V YA+ C +N
Sbjct: 36 LLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNM----------YAK---CRQIN 82
Query: 91 DS------VP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACA 140
D+ +P + WN +I GYA + + A+ + + M G +P T +L A A
Sbjct: 83 DAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVA 142
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
+ L GM V V ++G +S V + LV Y C A +FD M R+VVSWN
Sbjct: 143 DTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNS 202
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH-----LQ 255
+I V++ A+ F KM D G +P T++ L AC +LG+L GK+VH L+
Sbjct: 203 MIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLK 262
Query: 256 LIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEA 315
L +V+N +LI MY+KC V A +F + + +W+AMILG AQ+G EA
Sbjct: 263 LDSDVSVMN-----SLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEA 317
Query: 316 LELFSNMKNSSISPNYVTFLGVLCA 340
L F M++ +I P+ T + V+ A
Sbjct: 318 LNAFCEMQSRNIKPDSFTMVSVIPA 342
>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 572
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 171/468 (36%), Positives = 266/468 (56%), Gaps = 9/468 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HA + G+ D + LV C L+ ++ YA SI +++ +N +IRG
Sbjct: 16 QVHAHVLKCGIFFDTFCMSNLVATCALTKWGSMDYACSIFTQ-IDEPSSFDYNTMIRGNV 74
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ EA+ +++DM RG++P +FTYPFVLKAC+ + ++EG+QV +V K GL+ DV
Sbjct: 75 NDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLGVVDEGIQVHGHVFKMGLEGDVI 134
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV--CVENLWLGEAVGYFVKMKD 223
N+L+ YG C ++AC VF+ M E+SV SW+ II CVE +W E + KM
Sbjct: 135 VQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVE-MW-NECLMLLGKMSS 192
Query: 224 LG-FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
G +E+T++ VLSACT LG+ LGK +H L+ + LN + T+LIDMY K G +
Sbjct: 193 EGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVKSGCLE 252
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
+F M E N ++++ MI GLA HG +EAL++FS M ++P+ V ++GV AC+
Sbjct: 253 KGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFSACS 312
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVL 402
HAG+VE+G + F M+ H I+P HY M D+L R G LKEAY I +M +PN ++
Sbjct: 313 HAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKPNDVIW 372
Query: 403 RALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFM 462
R+LLSA +H + +G L L S + +++AN YA+ W+ V+ +R +
Sbjct: 373 RSLLSACKVH---HNLEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVAKIRTKL 429
Query: 463 KNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
L + G S +E +++F S S + IY+++ + +K
Sbjct: 430 AERNLVQTPGFSLIEAKRKVYKFVSQDKSIPQWNIIYEMIHQMEWQLK 477
>gi|296082968|emb|CBI22269.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 186/508 (36%), Positives = 274/508 (53%), Gaps = 23/508 (4%)
Query: 21 NSDLLSKAR---QCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKN 77
N +SK R Q +S L C S + QIHAQ+ + L ++ + ++L+ S +
Sbjct: 7 NPTWVSKRRLLEQKISDLHRCSSLNQVKQIHAQVLKANLHRESFVGQKLI--AAFSLCRQ 64
Query: 78 LTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLK 137
+T A ++ N + D + +N LIR + + P A VF +M+ G+ FTYPF+LK
Sbjct: 65 MTLAVNVF-NQIQDPDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLK 123
Query: 138 ACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS 197
AC+ + + A V K G D++ N+L+ Y +A ++FD+M ER VS
Sbjct: 124 ACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKLGELGEARRLFDEMPERDTVS 183
Query: 198 WNVIITVCVENLWLGEAVGYFVKMK----------DLGFEPDETTMLVVLSACTELGNLS 247
WN I+ V+ + A F KM + G + D+ T++ +LSAC G L
Sbjct: 184 WNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTMEAGLKFDDGTVISILSACAVSGLLG 243
Query: 248 LGKWVHLQLIERGTVLNCQ--LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
LGK VH IER T C + ALIDMYAKCG++ A +F M +V +W+A+I G
Sbjct: 244 LGKRVHAS-IER-TRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQG 301
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKP 365
LA HG+ E+AL+LFS MK P+ VTF+GVLCAC HAG V++G YFH ME +G+ P
Sbjct: 302 LAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPP 361
Query: 366 MRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVR 425
HY M D+L R G LKEA+ + +MP +PN I+ LL A +H A G+ EV
Sbjct: 362 EVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSAT---GLAEEVF 418
Query: 426 RRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRF 485
RL++ E S NL +++N YA G W+ +N+R MK+ ++K G S +E+ +H F
Sbjct: 419 DRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEVDDEVHEF 478
Query: 486 YSGYDSQVELAGIYQILETLNLHMKVLN 513
S + IY+ ++ L H+ L
Sbjct: 479 TVFDRSHPKSDRIYKTIDGLGQHINKLT 506
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 174/485 (35%), Positives = 267/485 (55%), Gaps = 6/485 (1%)
Query: 29 RQCLSFLKLC-CSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
R+C+S ++LC S+ L QIHA G+ + + F +S S +++A I N
Sbjct: 35 RKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIF-N 93
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVLKACAEISGLN 146
+ WN +IRG+A S+ P AV +F M I P T+PF+ KA A++ ++
Sbjct: 94 QIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVS 153
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G + + V ++G DS + N+LV Y A +VF+ M R V+WN +I
Sbjct: 154 LGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFA 213
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
N EA+ + +M G EPD TM+ +LSAC ELG L+LG+ VH+ +++ G V N
Sbjct: 214 LNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQH 273
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
AL+D+Y+KCG A+ +F MEE +V +W+++I+GLA +G EAL+LF ++
Sbjct: 274 ASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQG 333
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+ P+ +TF+GVL AC+H GM+++G+ YF M+ +GI P H+ M D+L RAG + +A
Sbjct: 334 LKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDA 393
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKY 446
Y +I NMP PN ++ R LL A +IH +G R + LE R S + V+++N Y
Sbjct: 394 YDYIRNMPVPPNAVIWRTLLGACTIHG---HLELGEVARAEIQRLEQRHSGDFVLLSNLY 450
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
A W V NVR+ M G+KK G S VEL ++ F G S + Y +L +
Sbjct: 451 ASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKIT 510
Query: 507 LHMKV 511
+K+
Sbjct: 511 QLLKI 515
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/509 (34%), Positives = 263/509 (51%), Gaps = 50/509 (9%)
Query: 13 FPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELV-RFCT 71
FPP P LSF ++ S L+Q HA I SGL + L+ T
Sbjct: 5 FPPPP-------------ILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVST 51
Query: 72 LSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFT 131
S ++ + YA SI N + + WN +IR YA S P A+ +F M + P ++T
Sbjct: 52 NSHAQAIPYAHSIFSRIPNPNSYM-WNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYT 110
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
+ F LK+C SG+ EG Q+ +V K+GL D++ N L+ Y SC DA + D M
Sbjct: 111 FTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRML 170
Query: 192 ERSVVSWNVIITVCVEN--------------------LWLGEAVGY------------FV 219
ER VVSWN +++ E W GY F
Sbjct: 171 ERDVVSWNALLSAYAERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFE 230
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
M+ G +PD T++ VLSAC +G LS G+WVH + + G ++ + TAL+DMY+KCG
Sbjct: 231 DMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCG 290
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
++ A +F+ ++ TW+++I GL+ HG + AL++FS M PN VTF+ VL
Sbjct: 291 SIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLS 350
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
AC+ AG++++G F+ M HVHGI+P HY M D+L R G L+EA + MP +
Sbjct: 351 ACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEAS 410
Query: 400 IVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVR 459
+V +LL A H + V ++LLEL P+ S + V ++N YA +G W+ V VR
Sbjct: 411 VVWESLLGACRNHG---NVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVR 467
Query: 460 RFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
+ M+ G++K G S +E+ G+++ F +G
Sbjct: 468 QKMRAQGVRKDPGCSMIEVDGTVYEFLAG 496
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 174/485 (35%), Positives = 267/485 (55%), Gaps = 6/485 (1%)
Query: 29 RQCLSFLKLC-CSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
R+C+S ++LC S+ L QIHA G+ + + F +S S +++A I N
Sbjct: 35 RKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIF-N 93
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVLKACAEISGLN 146
+ WN +IRG+A S+ P AV +F M I P T+PF+ KA A++ ++
Sbjct: 94 QIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVS 153
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G + + V ++G DS + N+LV Y A +VF+ M R V+WN +I
Sbjct: 154 LGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFA 213
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
N EA+ + +M G EPD TM+ +LSAC ELG L+LG+ VH+ +++ G V N
Sbjct: 214 LNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQH 273
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
AL+D+Y+KCG A+ +F MEE +V +W+++I+GLA +G EAL+LF ++
Sbjct: 274 ASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQG 333
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+ P+ +TF+GVL AC+H GM+++G+ YF M+ +GI P H+ M D+L RAG + +A
Sbjct: 334 LKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDA 393
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKY 446
Y +I NMP PN ++ R LL A +IH +G R + LE R S + V+++N Y
Sbjct: 394 YDYIRNMPVPPNAVIWRTLLGACTIHG---HLELGEVARAEIQRLEQRHSGDFVLLSNLY 450
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
A W V NVR+ M G+KK G S VEL ++ F G S + Y +L +
Sbjct: 451 ASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKIT 510
Query: 507 LHMKV 511
+K+
Sbjct: 511 QLLKI 515
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/484 (35%), Positives = 265/484 (54%), Gaps = 18/484 (3%)
Query: 35 LKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LK C + + + +H Q GL +D + L+R + + AR + D
Sbjct: 132 LKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDV--IRSARKVF-----D 184
Query: 92 SVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+ P + W +I+GY RE V +F +M ++ T VL +CA + L
Sbjct: 185 TSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRL 244
Query: 148 GMQVQANVTK-SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G ++ + + S ++ DV+ N LV Y C A KVF +M ++VVSWN +I+
Sbjct: 245 GRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLA 304
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+ E++ F KM+ LG +PD+ T++ VL++C LG L LGKWVH L +
Sbjct: 305 QKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGF 364
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+G AL+DMYAKCG++ A +F M +V++++AMI+GLA HG +AL+LFS M
Sbjct: 365 IGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMG 424
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
I P+ VTF+GVL AC+H G+VE+G +YF +M ++ ++P HY M D+L RAG + EA
Sbjct: 425 IEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEA 484
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKY 446
FI NMP +P+ VL ALL A IH K + +G V +++ ++EPR V+++N Y
Sbjct: 485 EEFIRNMPIEPDAFVLGALLGACKIH-GKVE--LGESVMKKIEKIEPRKDGAYVLMSNIY 541
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
+ W +R+ MK L+K G S +EL G IH F G S ++ IY++L+ +
Sbjct: 542 SSANRWRDALKLRKTMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEIM 601
Query: 507 LHMK 510
H+K
Sbjct: 602 SHLK 605
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 135/359 (37%), Positives = 196/359 (54%), Gaps = 6/359 (1%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQ--ILKELVRFCTLSSSKNLTYARSILCNYV 89
LS L+ C S K L QIHA I + DAQ I L C S + YA S+L
Sbjct: 26 LSTLQTCKSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLR 85
Query: 90 NDSVPIPWNNLIRGYAWSDRPR-EAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
++P+ +N +IRG A S+ E + V+ M +GI P +T PFVLKACAE + EG
Sbjct: 86 TPNLPL-YNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREG 144
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
+V K GL SDVY +N L+R Y C R A KVFD +R +VSW +I V+
Sbjct: 145 EEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKM 204
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNCQL 267
+ E VG F +M + D T+++VLS+C LG+L LG+ +H +I V L+ +
Sbjct: 205 GFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFV 264
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
G AL+DMY KCG AR +F M NV +W++MI GLAQ G +E+L +F M+ +
Sbjct: 265 GNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGV 324
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
P+ VT + VL +C + G++E G ++ H + I+ + + D+ A+ G + +A
Sbjct: 325 KPDDVTLVAVLNSCANLGVLELG-KWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQA 382
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 189/546 (34%), Positives = 277/546 (50%), Gaps = 47/546 (8%)
Query: 4 FPVPTT---NHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDA 60
FP+P + N I KP + S+ L + L+ S L Q+HAQI +
Sbjct: 8 FPIPQSPNRNQIHNVKPQS--SETLK-----IDLLRNFNSPFELRQVHAQIIKTNAPLSI 60
Query: 61 QILKELVRFCTLSSSKNLTYARSIL-CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFID 119
L + C + S YA+ I C WN+ ++ A D P +A+ +F
Sbjct: 61 LPLTRVGLVCAFTPS--FHYAQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYR 118
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
+++ + P FT VL+AC + L+ G + V K G S++Y N +V Y SC
Sbjct: 119 LRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGE 178
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVEN-------------------LWLG-------- 212
+A +F+ M +R VV+WN++I ++ W
Sbjct: 179 MGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQC 238
Query: 213 ----EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
EA+ F KM++ G + +E T++ VL+AC +LG L LG +H G N ++
Sbjct: 239 GKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRIS 298
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
LIDMY KCG + A +F MEE V +WSAMI GLA HG AEEAL LFS+M I
Sbjct: 299 NTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIE 358
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
PN VTF+G+L AC+H G++ +G R+F M +GI P HY M D+L+RAG L EA+
Sbjct: 359 PNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHE 418
Query: 389 FIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAE 448
FI+NMP +PN +V ALL A +H + E + LLEL+P V+++N YAE
Sbjct: 419 FILNMPMKPNGVVWGALLGACRVHK---NVEMAEEAIKHLLELDPLNDGYYVVLSNIYAE 475
Query: 449 VGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLH 508
G WE + VR+FMK+ +KK G S + + G +H F +G +S + I+Q E L
Sbjct: 476 AGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEE 535
Query: 509 MKVLNF 514
M++ +
Sbjct: 536 MRLKGY 541
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/508 (33%), Positives = 265/508 (52%), Gaps = 43/508 (8%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKN---LTYARSILCNY 88
LSFL+ C + HL IHA L I C +S S N L YA +
Sbjct: 19 LSFLESCTTLSHLKIIHAH-----LIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQI 73
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
N ++ I +N+ IRG++ S P ++ ++ KR G+ P TYPF++KAC + L+ G
Sbjct: 74 QNPNLFI-YNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMG 132
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRR--------KRDAC---------------- 184
+Q + + G DSDVY N+LV Y + +R +C
Sbjct: 133 IQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKS 192
Query: 185 -------KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVL 237
K+FD M E+++V+W+V+I+ +N + +A+ + ++ G +ET M+ V+
Sbjct: 193 GDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVI 252
Query: 238 SACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVW 297
++C LG L LG+ H ++ +N LGTAL+DMYA+CG++ A +F ++ +
Sbjct: 253 ASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDAL 312
Query: 298 TWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM 357
+W+ +I G A HGYAE+ALE FS M+ + ++P +TF VL AC+H G+VE G F M
Sbjct: 313 SWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESM 372
Query: 358 EHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQ 417
+ + I+P HY M D+L RAG L EA F+ MP +PN + ALL A IH
Sbjct: 373 KRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHK---N 429
Query: 418 DGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVE 477
+ + L+EL+P S V+++N YA WE V N+R+ MK G+ K G + E
Sbjct: 430 SEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFE 489
Query: 478 LGGSIHRFYSGYDSQVELAGIYQILETL 505
+ G +H+F G + E+ I ++ E +
Sbjct: 490 MDGKVHKFTIGDKTHPEIQQIERMWEEI 517
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 168/475 (35%), Positives = 267/475 (56%), Gaps = 6/475 (1%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKN-LTYARSILCNYVNDSVPIP 96
C S + L QI A S ++ D + +L+ FCT S +++ ++YAR + + I
Sbjct: 39 CNSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVI- 96
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
+N++ RGY+ P E +F+++ GI P +T+P +LKACA L EG Q+
Sbjct: 97 FNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSM 156
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
K GLD +VY L+ Y C A VFD + E VV +N +IT EA+
Sbjct: 157 KLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALS 216
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F +M+ +P+E T+L VLS+C LG+L LGKW+H + ++ TALIDM+A
Sbjct: 217 LFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFA 276
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KCG++ A +F +M + WSAMI+ A HG AE+++ +F M++ ++ P+ +TFLG
Sbjct: 277 KCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLG 336
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
+L AC+H G VE+G +YF +M GI P HY +M D+L+RAG+L++AY FI +P
Sbjct: 337 LLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPIS 396
Query: 397 PNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVS 456
P P++ R LL+A S H+ + +V R+ EL+ + VI++N YA WE V
Sbjct: 397 PTPMLWRILLAACSSHN---NLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVD 453
Query: 457 NVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
++R+ MK+ K+ G S +E+ +H F+SG + +++ L+ + +K+
Sbjct: 454 SLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKL 508
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 189/546 (34%), Positives = 277/546 (50%), Gaps = 47/546 (8%)
Query: 4 FPVPTT---NHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDA 60
FP+P + N I KP + S+ L + L+ S L Q+HAQI +
Sbjct: 8 FPIPQSPNRNQIHHVKPQS--SETLK-----IDLLRNFNSPFELRQVHAQIIKTNAPLSI 60
Query: 61 QILKELVRFCTLSSSKNLTYARSIL-CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFID 119
L + C + S YA+ I C WN+ ++ A D P +A+ +F
Sbjct: 61 LPLTRVGLVCAFTPS--FHYAQQIFECVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYR 118
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
+++ + P FT VL+AC + L+ G + V K G S++Y N +V Y SC
Sbjct: 119 LRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGE 178
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVEN-------------------LWLG-------- 212
+A +F+ M +R VV+WN++I ++ W
Sbjct: 179 MGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQC 238
Query: 213 ----EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
EA+ F KM++ G + +E T++ VL+AC +LG L LG +H G N ++
Sbjct: 239 GKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRIS 298
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
LIDMY KCG + A +F MEE V +WSAMI GLA HG AEEAL LFS+M I
Sbjct: 299 NTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIE 358
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
PN VTF+G+L AC+H G++ +G R+F M +GI P HY M D+L+RAG L EA+
Sbjct: 359 PNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHE 418
Query: 389 FIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAE 448
FI+NMP +PN +V ALL A +H + E + LLEL+P V+++N YAE
Sbjct: 419 FILNMPMKPNGVVWGALLGACRVHK---NVEMAEEAIKHLLELDPLNDGYYVVLSNIYAE 475
Query: 449 VGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLH 508
G WE + VR+FMK+ +KK G S + + G +H F +G +S + I+Q E L
Sbjct: 476 AGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEE 535
Query: 509 MKVLNF 514
M++ +
Sbjct: 536 MRLKGY 541
>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 638
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 173/506 (34%), Positives = 262/506 (51%), Gaps = 38/506 (7%)
Query: 43 HLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLT-YARSILCNYVNDSVPIPWNNLI 101
+ Q HA+I V GL ND +I L+ F +SSS + YA SI N ++ NN+I
Sbjct: 46 QIKQAHARILVLGLANDGRITSHLLAFLAISSSSLPSDYALSIY-NSISHPTVFATNNMI 104
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIK-PTEFTYPFVLKACAEISGLNEGMQVQANVTKSGL 160
R + D PR ++ ++ M R + P + T FVL+AC+ + EG QVQ +V K G
Sbjct: 105 RCFVKGDLPRHSISLYSHMCRSFVAAPNKHTLTFVLQACSNAFAIREGAQVQTHVIKLGF 164
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDD------------------------------- 189
DV+ N L+ Y +C R A +VFD+
Sbjct: 165 VKDVFVRNALIHLYCTCCRVESAKQVFDEVPSSRDVVSWNSMIVGFVRLGQISVAQKLFV 224
Query: 190 -MCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSL 248
M E+ V+SW II+ CV+N L +A+ YF ++ + P+E ++ +L+A +LG L
Sbjct: 225 EMPEKDVISWGTIISGCVQNGELEKALDYFKELGEQKLRPNEAILVSLLAAAAQLGTLEY 284
Query: 249 GKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ 308
GK +H + LGTAL+DMYAKCG + +R LF RM E + W+W+ MI GLA
Sbjct: 285 GKRIHSIANSLRFPMTASLGTALVDMYAKCGCIDESRFLFDRMPEKDKWSWNVMICGLAT 344
Query: 309 HGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRI 368
HG +EAL LF P VTF+GVL AC+ AG+V +G +F M +GI+P
Sbjct: 345 HGLGQEALALFEKFLTQGFHPVNVTFIGVLTACSRAGLVSEGKHFFKLMTDTYGIEPEME 404
Query: 369 HYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRL 428
HY M D+L+RAG + +A I MP P+P++ ++L + +H +G E+ +L
Sbjct: 405 HYGCMVDLLSRAGFVYDAVEMINRMPAPPDPVLWASVLGSCQVHGFIE---LGEEIGNKL 461
Query: 429 LELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
++++P + + V +A +A + WE VS VRR M K+ G S +E G +HRF +G
Sbjct: 462 IQMDPTHNGHYVQLARIFARLRKWEDVSKVRRLMAERNSNKIAGWSLIEAEGRVHRFVAG 521
Query: 489 YDSQVELAGIYQILETLNLHMKVLNF 514
IY++LE + + + +
Sbjct: 522 DKEHERTTEIYKMLEIMGVRIAAAGY 547
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 178/518 (34%), Positives = 275/518 (53%), Gaps = 42/518 (8%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+ LK C + L +IHA I L + ++ ++V C + T ++L V D
Sbjct: 18 VPILKNCPNIVELKKIHAHIVKFSLSQSSFLVTKMVDVCNHHAE---TEYANLLFKRVAD 74
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDM-----KRRGIKPTEFTYPFVLKACAEISGLN 146
+N +IR Y + A+ V+ M I P +FT+PFV+K+CA + +
Sbjct: 75 PNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSCAGLMCYD 134
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT--- 203
G QV +V K G S+ N+LV Y C DA KVF++M ER VSWN +I+
Sbjct: 135 LGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLISGHV 194
Query: 204 ---------VCVENL-------WLG------------EAVGYFVKMKDLGFEPDETTMLV 235
E + W +A+ +F +M+ +G EPDE +++
Sbjct: 195 RLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVS 254
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
VL AC +LG L LGKW+H + G + N + ALI+MYAKCG++ R LF +M E +
Sbjct: 255 VLPACAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFDQMNERD 314
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
V +WS MI+GLA HG A EA+ELF M+ + I PN +TF+G+L AC HAG++ +G RYF
Sbjct: 315 VISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGLLNEGLRYFE 374
Query: 356 EMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAK 415
M+ + I+P HY + ++L +G L +A I MP +P+ + +LLS+ H
Sbjct: 375 SMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIWGSLLSSCRSHSNL 434
Query: 416 YQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSW 475
+ E LLELEP + N V+++N YA++G W+ VS +R+ M++ +KK G S
Sbjct: 435 EIAVIAME---HLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSS 491
Query: 476 VELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLN 513
+E+ + F SG DS+ IY++L+ L +H + ++
Sbjct: 492 IEVDNMVQEFASGDDSKPFSKAIYRVLKLLVMHQRRMD 529
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 109/270 (40%), Gaps = 45/270 (16%)
Query: 121 KRRGIKPTEFTYPFV--LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCR 178
K R +K E FV LK C I L ++ A++ K L + +V
Sbjct: 4 KLRALKIREMEDIFVPILKNCPNIVELK---KIHAHIVKFSLSQSSFLVTKMVDVCNHHA 60
Query: 179 RKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE-------PDET 231
A +F + + + +N +I N A+ + +M LG PD+
Sbjct: 61 ETEYANLLFKRVADPNAFLYNAMIRAYKHNKVYVLAITVYKQM--LGHSHGENPIFPDKF 118
Query: 232 TMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC------------- 278
T V+ +C L LGK VH + + G N + +L++MY KC
Sbjct: 119 TFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEM 178
Query: 279 ------------------GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS 320
G + AR +F M++ +++W+A++ G A+ G +ALE F
Sbjct: 179 TERDAVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFR 238
Query: 321 NMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
M+ I P+ ++ + VL AC G +E G
Sbjct: 239 RMQMVGIEPDEISLVSVLPACAQLGALELG 268
>gi|326522825|dbj|BAJ88458.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 187/513 (36%), Positives = 260/513 (50%), Gaps = 32/513 (6%)
Query: 8 TTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELV 67
T + P KP L L C S + L Q+HA SGL ++ L+
Sbjct: 9 TPTPLLPAKPKG----------PLLPHLPHCTSLRALAQLHAAAVKSGLGAHPALVTRLL 58
Query: 68 RFCTL--SSSKNLTYARSILCNYVNDSVPIP-----WNNLIRGYAWS-DRPREAVWVFID 119
CT ++ +L YAR + D +P P +N L+RGYA S D EA V
Sbjct: 59 TLCTKQGAAPAHLAYARQVF-----DRIPTPGDVVWYNTLLRGYARSSDGAAEAARVLAR 113
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M G+ P +T+ +LKACA EG Q K+G Y L+ Y C
Sbjct: 114 MLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHGVAVKTGAADHEYVLPTLINMYAECGD 173
Query: 180 KRDACKVFDDMCERS-VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
R A +F + VVS+N +IT V + GEA+ F +M+ G +P T+ VLS
Sbjct: 174 ARSARAMFGRVPNGDCVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKPTSVTVTSVLS 233
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
AC LG L LG+W+H + + G ++ TALIDMY KCG++ A +F ME +
Sbjct: 234 ACALLGALELGRWIHEYVRKAGLDSLVKVNTALIDMYGKCGSLEDAIDVFQGMESRDRQA 293
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
WS MI+ A H Y EA+ LF MK I P+ VTFLGVL AC+H+GMV +G +YF M
Sbjct: 294 WSVMIVAYANHSYGREAISLFEEMKKQGIRPDAVTFLGVLYACSHSGMVSEGLQYFDSMR 353
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD 418
+GI P HY + D+LAR+G L++AY FI +P QP I+ R LLSA H A
Sbjct: 354 E-YGIVPGIKHYGCVTDLLARSGQLEKAYKFIDELPIQPTAILWRTLLSACGSHGAV--- 409
Query: 419 GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVEL 478
+G V R+LEL+ + VI +N A G WE+++ VR+ M G+ K+ G S +E+
Sbjct: 410 DLGKRVFERILELDDTHGSDYVIFSNLCANTGKWEEMNRVRKLMNEKGVVKVPGCSSIEI 469
Query: 479 GGSIHRFYSG----YDSQVELAGIYQILETLNL 507
+H F++G SQ + Q++E L L
Sbjct: 470 DNRVHEFFAGDGRHPQSQDARRMVDQVIEQLKL 502
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 159/420 (37%), Positives = 234/420 (55%), Gaps = 3/420 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I GYA + EA F+ M G++PT + L ACA + L G V
Sbjct: 310 VSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRL 369
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ + + DV N+L+ Y C+R A VF ++ ++VV+WN +I +N + EA
Sbjct: 370 LDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEA 429
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M+ +PD T++ V++A +L KW+H I N + TALID
Sbjct: 430 LNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDT 489
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
+AKCGA+ AR LF M+E +V TW+AMI G +G+ EAL+LF+ M+N S+ PN +TF
Sbjct: 490 HAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITF 549
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
L V+ AC+H+G+VE+G YF M+ +G++P HY M D+L RAG L +A+ FI +MP
Sbjct: 550 LSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMP 609
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
+P VL A+L A IH +G + L +L+P V++AN YA MW+K
Sbjct: 610 VKPGITVLGAMLGACRIHK---NVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDK 666
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
V+ VR M+ G++K G S VEL +H FYSG + + IY LETL MK +
Sbjct: 667 VARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGY 726
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 171/325 (52%), Gaps = 6/325 (1%)
Query: 34 FLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILCNYVNDS 92
L+LC S K L+QI I +G N+ +L+ FC +S +T A + V
Sbjct: 50 LLELCTSLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNS---ITEAARVF-EPVEHK 105
Query: 93 VPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQ 152
+ + ++ +++GYA + R+AV + M+ + P + + ++L+ E L G ++
Sbjct: 106 LDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIH 165
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
V +G S+++ +V Y CR+ DA K+F+ M +R +VSWN ++ +N +
Sbjct: 166 GMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFAR 225
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
AV ++M++ G +PD T++ VL A +L L +G+ +H G + TA++
Sbjct: 226 RAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAML 285
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
D Y KCG+V ARL+F M NV +W+ MI G AQ+G +EEA F M + + P V
Sbjct: 286 DTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNV 345
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEM 357
+ +G L AC + G +E G RY H +
Sbjct: 346 SMMGALHACANLGDLERG-RYVHRL 369
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 165/364 (45%), Gaps = 44/364 (12%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN ++ GYA + R AV V + M+ G KP T VL A A++ L G +
Sbjct: 209 VSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGY 268
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
++G + V ++ Y C R A VF M R+VVSWN +I +N EA
Sbjct: 269 AFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEA 328
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
F+KM D G EP +M+ L AC LG+L G++VH L E+ + + +LI M
Sbjct: 329 FATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISM 388
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KC V A +F ++ V TW+AMILG AQ+G EAL LF M++ I P+ T
Sbjct: 389 YSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTL 448
Query: 335 LGVLCAC---------------------------------NHA--GMVEDGYRYFHEMEH 359
+ V+ A HA G ++ + F M+
Sbjct: 449 VSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQE 508
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEA---YTFIMNMPFQPNPIVLRALLSASSIHDAKY 416
H I ++ M D GH +EA + + N +PN I ++++A S H
Sbjct: 509 RHVIT-----WNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACS-HSGLV 562
Query: 417 QDGV 420
++G+
Sbjct: 563 EEGM 566
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 167/475 (35%), Positives = 266/475 (56%), Gaps = 6/475 (1%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKN-LTYARSILCNYVNDSVPIP 96
C S + L QI A S ++ D + +L+ FCT S +++ ++YAR + + I
Sbjct: 39 CNSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVI- 96
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
+N++ RGY+ P E +F+++ GI P +T+P +LKACA L EG Q+
Sbjct: 97 FNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSM 156
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
K GLD +VY L+ Y C A VFD + E VV +N +IT EA+
Sbjct: 157 KLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNEALS 216
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F +M+ +P+E T+L VLS+C LG+L LGKW+H + ++ TALIDM+A
Sbjct: 217 LFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFA 276
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KCG++ A +F +M + WSAMI+ A HG AE+++ +F M++ ++ P+ +TFLG
Sbjct: 277 KCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLG 336
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
+L AC+H G VE+G +YF +M GI P HY +M D+L+ AG+L++AY FI +P
Sbjct: 337 LLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDKLPIS 396
Query: 397 PNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVS 456
P P++ R LL+A S H+ + +V R+ EL+ + VI++N YA WE V
Sbjct: 397 PTPMLWRILLAACSSHN---NLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVD 453
Query: 457 NVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
++R+ MK+ K+ G S +E+ +H F+SG + +++ L+ + +K+
Sbjct: 454 SLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKL 508
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 159/414 (38%), Positives = 233/414 (56%), Gaps = 3/414 (0%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN +IRGY+ SD P A+ ++ DM GI P +T+ FVL AC ++ L EG ++ + +
Sbjct: 35 WNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVLNACCKLLRLCEGQELHSQIV 94
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
K+GLD + N L++ Y +C AC +FD+M E SW+ +++ +N E +
Sbjct: 95 KAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYSQNGQAVETLK 154
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
+M+ D T+ V+ C +LG L LGKWVH + + G ++ LGTAL+ MY+
Sbjct: 155 LLREMQAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSYIDKEGVKIDVVLGTALVGMYS 214
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KCG++ A +F M E +V TWS MI G A HG+ E+AL+LF MK S I PN VTF
Sbjct: 215 KCGSLDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKALQLFDAMKRSKIIPNCVTFTS 274
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
VL A +H+G+VE G++ F M + I P HY M D+ RAG + A+ FI MP +
Sbjct: 275 VLSAYSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIE 334
Query: 397 PNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVS 456
PN ++ R LL A H K G+G + R++L+L+P +N V V+N YA +G W V
Sbjct: 335 PNVVLWRTLLGACKTHGYK---GLGEHISRKILKLDPSSPENYVFVSNVYASLGRWSSVC 391
Query: 457 NVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
VR MK KK G S +E+ +H+F G +S + IY +L + +K
Sbjct: 392 QVRSLMKEKAPKKQHGWSSIEINFMVHKFIMGEESHPKREKIYGMLHQMARKLK 445
>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 189/528 (35%), Positives = 277/528 (52%), Gaps = 19/528 (3%)
Query: 2 VRFPVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQ 61
+RF + T P +S + ++ S + C L Q+HA + +
Sbjct: 79 IRFGLKTLVFSRIPNLKYGSSTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPA 138
Query: 62 ILKELVRFCTLSSS-KNLTYARSILCNYVNDSVPIPWNNLIRGYAWS-DRPREAVWVFID 119
L + LSSS ++ YA + + N S WN LIR A R EA ++
Sbjct: 139 TLFLYGKILQLSSSFSDVNYAFRVFDSIENHS-SFMWNTLIRACAHDVSRKEEAFMLYRK 197
Query: 120 MKRRG-IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCR 178
M RG P + T+PFVLKACA I G +EG QV + K G DVY NN L+ YGSC
Sbjct: 198 MLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCG 257
Query: 179 RKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
A KVFD+M ERS+VSWN +I V A+ F +M+ FEPD TM VLS
Sbjct: 258 CLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLS 316
Query: 239 ACTELGNLSLGKWVHLQLIERGTV---LNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
AC LG+LSLG W H L+ + V ++ + +LI+MY KCG++ A +F M++ +
Sbjct: 317 ACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRD 376
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNM--KNSSISPNYVTFLGVLCACNHAGMVEDGYRY 353
+ +W+AMILG A HG AEEA+ F M K ++ PN VTF+G+L ACNH G V G +Y
Sbjct: 377 LASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQY 436
Query: 354 FHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHD 413
F M + I+P HY + D++ARAG++ EA +M+MP +P+ ++ R+LL A
Sbjct: 437 FDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 496
Query: 414 AKYQDGVGNEVRRRLLEL-EPRGSQN------LVIVANKYAEVGMWEKVSNVRRFMKNVG 466
A + + E+ R ++ E S N V+++ YA W V VR+ M G
Sbjct: 497 ASVE--LSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHG 554
Query: 467 LKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
++K G S +E+ G H F++G S + IYQ L+ ++ ++ + +
Sbjct: 555 IRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGY 602
>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 184/497 (37%), Positives = 267/497 (53%), Gaps = 19/497 (3%)
Query: 33 SFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSS-KNLTYARSILCNYVND 91
+ L+ C L Q+HA + + L + LSSS ++ YA + + N
Sbjct: 30 TVLQTCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENH 89
Query: 92 SVPIPWNNLIRGYAWS-DRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEISGLNEGM 149
S WN LIR A R EA ++ M RG P + T+PFVLKACA I G +EG
Sbjct: 90 S-SFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGK 148
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
QV + K G DVY NN L+ YGSC A KVFD+M ERS+VSWN +I V
Sbjct: 149 QVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFG 208
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV---LNCQ 266
A+ F +M+ FEPD TM VLSAC LG+LSLG W H L+ + V ++
Sbjct: 209 EYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVL 267
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM--KN 324
+ +LI+MY KCG++ A +F M++ ++ +W+AMILG A HG AEEA+ F M K
Sbjct: 268 VKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKR 327
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
++ PN VTF+G+L ACNH G V G +YF M + I+P HY + D++ARAG++
Sbjct: 328 ENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYIT 387
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLEL-EPRGSQN----- 438
EA +M+MP +P+ ++ R+LL A A + + E+ R ++ E S N
Sbjct: 388 EAIDMVMSMPMKPDAVIWRSLLDACCKKGASVE--LSEEIARNIIGTKEDNESSNGNCSG 445
Query: 439 -LVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAG 497
V+++ YA W V VR+ M G++K G S +E+ G H F++G S +
Sbjct: 446 AYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQ 505
Query: 498 IYQILETLNLHMKVLNF 514
IYQ L+ ++ ++ + +
Sbjct: 506 IYQQLKVIDDRLRSIGY 522
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 184/529 (34%), Positives = 274/529 (51%), Gaps = 58/529 (10%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSS--SKNLTYARSILCNYVNDSVPI 95
C + + L QIHA SG D E++RFC S ++L YA I N +
Sbjct: 33 CRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIF-NQMPQRNCF 91
Query: 96 PWNNLIRGYAWSDRPRE--AVWVFIDM-KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQ 152
WN +IRG++ SD + A+ +F +M ++P FT+P VLKACA+ + EG Q+
Sbjct: 92 SWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIH 151
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSC------------------------RRKRDA----- 183
K G D + +NLVR Y C RRKRD
Sbjct: 152 GLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLW 211
Query: 184 ------------CK----VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
CK +FD M +RSVVSWN +I+ N + +AV F +MK
Sbjct: 212 NVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIR 271
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
P+ T++ VL A + LG+L LG+W+HL + G ++ LG+ALIDMY+KCG + A +
Sbjct: 272 PNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHV 331
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMV 347
F R+ NV TWSAMI G A HG A +A++ F M+ + + P+ V ++ +L AC+H G+V
Sbjct: 332 FERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLV 391
Query: 348 EDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLS 407
E+G RYF +M V G++P HY M D+L R+G L EA FI+NMP +P+ ++ +ALL
Sbjct: 392 EEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLG 451
Query: 408 ASSIHDAKYQDGV--GNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
A + Q V G V L+++ P S V ++N YA G W +VS +R MK
Sbjct: 452 A-----CRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEK 506
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
++K G S +++ G +H F DS + I +L ++ +++ +
Sbjct: 507 DIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGY 555
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 162/420 (38%), Positives = 236/420 (56%), Gaps = 3/420 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I GYA + REA+ +F M G+ T+ + L+AC E+ L+EGM+V
Sbjct: 228 VSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHEL 287
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ + GLDS+V N L+ Y C+R A VFD++ R+ VSWN +I C +N +A
Sbjct: 288 LVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDA 347
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
V F +M+ +PD T++ V+ A ++ + +W+H I + + TALIDM
Sbjct: 348 VRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDM 407
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG V AR+LF+ E +V TW+AMI G HG+ + A+ELF MK+ I PN TF
Sbjct: 408 YAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTF 467
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
L VL AC+HAG+V++G YF M+ +G++P HY TM D+L RAG L EA+ FI MP
Sbjct: 468 LSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMP 527
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
P V A+L A +H + E +++ EL P+ V++AN YA MW+
Sbjct: 528 MDPGLSVYGAMLGACKLHK---NVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKD 584
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
V+ VR M+ GL+K G S ++L IH FYSG + + IY L L +K + +
Sbjct: 585 VARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGY 644
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 155/320 (48%), Gaps = 15/320 (4%)
Query: 29 RQCLSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
R S LKLC ++ L +HAQ+ G+ ++A L + + AR +
Sbjct: 60 RTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANM--YAKCRRPADARRVF 117
Query: 86 CNYVNDSVPI----PWNNLIRGYAWSDRPREAVWVFIDMKRR-GIKPTEFTYPFVLKACA 140
D +P+ WN L+ GYA + R A+ + + M+ G +P T VL ACA
Sbjct: 118 -----DRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACA 172
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
L + A +SGL+ V ++ Y C R A VFD M ++ VSWN
Sbjct: 173 NARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNA 232
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
+I +N EA+ F +M + G + + ++L L AC ELG L G VH L+ G
Sbjct: 233 MIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIG 292
Query: 261 TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS 320
N + ALI MY+KC V A +F ++ +W+AMILG AQ+G +E+A+ LF+
Sbjct: 293 LDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFT 352
Query: 321 NMKNSSISPNYVTFLGVLCA 340
M+ ++ P+ T + V+ A
Sbjct: 353 RMQLENVKPDSFTLVSVIPA 372
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 123/252 (48%), Gaps = 3/252 (1%)
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
SD P A+ F+ M G P T+ +LK CA L G V A + G+DS+
Sbjct: 38 SDLP-AALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALA 96
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL-G 225
L Y CRR DA +VFD M R V+WN ++ N A+ V+M++ G
Sbjct: 97 ATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEG 156
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
PD T++ VL AC L+ + H I G + TA++D Y KCG + AR
Sbjct: 157 ERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAAR 216
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
++F M N +W+AMI G AQ+G + EAL LF+ M + V+ L L AC G
Sbjct: 217 VVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELG 276
Query: 346 MVEDGYRYFHEM 357
+++G R HE+
Sbjct: 277 CLDEGMR-VHEL 287
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 170/460 (36%), Positives = 251/460 (54%), Gaps = 6/460 (1%)
Query: 55 GLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAV 114
GL D +L L+ +S ++ AR + + +S + WN ++ Y + E V
Sbjct: 150 GLVADRFVLSSLIHM--YASCGDVAAARLVF-DAAEESGVVMWNAIVAAYLKNGDWMEVV 206
Query: 115 WVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFY 174
+F M G+ E T V+ AC I G V +V + GL + L+ Y
Sbjct: 207 EMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMY 266
Query: 175 GSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTML 234
C A ++FD M R VV+W+ +I+ + EA+G F +M+ EP++ TM+
Sbjct: 267 AKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMV 326
Query: 235 VVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI 294
VLSAC LG L GKWVH + + L LGTAL+D YAKCG + A F M
Sbjct: 327 SVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVK 386
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYF 354
N WTW+A+I G+A +G EALELFS+M+ + I P VTF+GVL AC+H+ +VE+G R+F
Sbjct: 387 NSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHF 446
Query: 355 HEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDA 414
M +GIKP HY M D+L RAG + EAY FI MP +PN ++ RALLS+ ++H
Sbjct: 447 DSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVH-- 504
Query: 415 KYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMS 474
G+G E ++++ L P S + V+++N YA G W+ + VR+ MK+ G++K G S
Sbjct: 505 -RNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCS 563
Query: 475 WVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+EL G + F++ EL IYQ +E + +KV +
Sbjct: 564 LIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGY 603
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/358 (34%), Positives = 179/358 (50%), Gaps = 6/358 (1%)
Query: 43 HLYQIHAQIQVSG-LQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP-WNNL 100
+L Q+HA + SG L A+ L+ +S L YA S+ + P +N L
Sbjct: 31 YLPQLHAALIKSGELTGSAKSFHSLLE-AAAASPTLLPYAVSLFRLGPRPPLSTPCYNVL 89
Query: 101 IRGYAWSDRPREAVWVFIDM--KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
+R + + P +A+ +FI+M + T LK+C+ + L+ G VQA K
Sbjct: 90 MRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKR 149
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
GL +D + ++L+ Y SC A VFD E VV WN I+ ++N E V F
Sbjct: 150 GLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMF 209
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
M ++G DE T++ V++AC +G+ LGKWV + E G N +L TAL+DMYAKC
Sbjct: 210 KGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKC 269
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
G +G AR LF M+ +V WSAMI G Q EAL LFS M+ + + PN VT + VL
Sbjct: 270 GEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVL 329
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
AC G +E G ++ H + I + D A+ G + +A +MP +
Sbjct: 330 SACAVLGALETG-KWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVK 386
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 178/481 (37%), Positives = 264/481 (54%), Gaps = 10/481 (2%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S L+ C +K + Q+HA+I G+ + + +LV + +S LT A +L + +
Sbjct: 6 SLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNS--LTNAH-LLFDRI 62
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+ WN +IRGYAW+ A+ ++ M+ G+ P +FT+PFVLKAC+ +S + EG
Sbjct: 63 SKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGK 122
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
++ +V +SGL+SDV+ L+ Y C A +VFD + ER VV WN ++ +N
Sbjct: 123 KIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNG 182
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
E++ M G +P E T ++ ++A + G L GK +H G N ++ T
Sbjct: 183 QPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKT 242
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
AL+DMYAK G+V AR LF +EE V +W+AMI G A HG+A EAL+LF MK + P
Sbjct: 243 ALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKG-KVLP 301
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
+++TF+GVL AC+H G++ +G +F M I P HY M D+L G L+EAY
Sbjct: 302 DHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKL 361
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
IM M +P+ V ALL + IH +G +L+ELEP N VI++N YA+
Sbjct: 362 IMEMRVEPDAGVWGALLHSCKIHG---NVEMGELALEKLVELEPDDGGNYVILSNMYAQA 418
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
G W+ V+ +R M N GLKK SW+E+G +H F S S + IY L+ M
Sbjct: 419 GKWDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLM 478
Query: 510 K 510
K
Sbjct: 479 K 479
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 139/281 (49%), Gaps = 2/281 (0%)
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
Y +L++C + G Q+ A + + G+ + LV Y C +A +FD +
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
+R++ WNV+I N A+ + +M+D G PD+ T VL AC+ L + GK
Sbjct: 64 KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+H +I G + +G ALIDMYAKCG V AR +F +++E +V W++M+ +Q+G
Sbjct: 124 IHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQ 183
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
+E+L L M + + P TF+ + A G++ G + H HG +
Sbjct: 184 PDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQG-KELHGYSWRHGFESNDKVKT 242
Query: 372 TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
+ D+ A++G + A + + + + + A+++ ++H
Sbjct: 243 ALMDMYAKSGSVNVARS-LFELLEEKRVVSWNAMITGYAMH 282
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/460 (36%), Positives = 253/460 (55%), Gaps = 8/460 (1%)
Query: 48 HAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWS 107
H + GL D + L+ + + AR + + ++ + WN++I GY+
Sbjct: 150 HCSVIRRGLDEDGHVSHSLI--TMYARCGKMGDARKVF-DEISQKDLVSWNSMISGYSKM 206
Query: 108 DRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTN 167
EAV +F +M G +P E + VL AC E+ L G V+ V ++ + + +
Sbjct: 207 RHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMG 266
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
+ L+ YG C A ++FD M ++ V+WN +IT +N EA+ F M+
Sbjct: 267 SALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTA 326
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
PD+ T++ +LSAC +G L LGK V + ERG + +GTAL+DMYAKCG++ A +
Sbjct: 327 PDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRV 386
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN--SSISPNYVTFLGVLCACNHAG 345
F M + N +W+AMI LA HG A+EAL LF +M N ++SPN +TF+GVL AC HAG
Sbjct: 387 FYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAG 446
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+V++G R FH M G+ P HY M D+ +RAGHL+EA+ F+M MP +P+ ++L AL
Sbjct: 447 LVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGAL 506
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
L A + + V + LLELEP S N VI + YA + W+ + +R MK
Sbjct: 507 LGACQ---KRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQK 563
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
G+ K G SW+++ +H F++G E I+QIL+ L
Sbjct: 564 GVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLL 603
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 139/404 (34%), Positives = 216/404 (53%), Gaps = 20/404 (4%)
Query: 14 PPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLS 73
P N N LS S L+ C S K L QIHAQ+ + + L ++
Sbjct: 20 PHSKPNPNRQALSDKFN--SLLQQCLSIKQLKQIHAQLLTNSIHKPNSFLYKIADL---- 73
Query: 74 SSKNLTYARSILCNYVNDSVPIPWNNLIRGY--AWSDRPREAVWVFIDMKRRGIKPTEFT 131
K+ YA N + D +N +IRG AW ++ A+ + MK G+KP T
Sbjct: 74 --KDFAYASVFFSNIL-DPTEYSFNVMIRGLSTAW-NKSSLALEFYSRMKFLGLKPNNLT 129
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
YPF+ AC+ + + G +V + GLD D + +++L+ Y C + DA KVFD++
Sbjct: 130 YPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEIS 189
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
++ +VSWN +I+ + GEAVG F +M + GF+P+E +++ VL AC ELG+L LG W
Sbjct: 190 QKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTW 249
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
V ++E LN +G+ALI MY KCG + AR +F M++ + TW+AMI G AQ+G
Sbjct: 250 VEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGM 309
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR---YFHEMEHVHGIKPMRI 368
+EEA++LF +M+ SS +P+ +T +G+L AC G ++ G + Y E G +
Sbjct: 310 SEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASE----RGFQDDVY 365
Query: 369 HYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
+ D+ A+ G L A+ MP + N + A++SA + H
Sbjct: 366 VGTALVDMYAKCGSLDNAFRVFYGMP-KKNEVSWNAMISALAFH 408
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 162/420 (38%), Positives = 236/420 (56%), Gaps = 3/420 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I GYA + REA+ +F M G+ T+ + L+AC E+ L+EGM+V
Sbjct: 228 VSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHEL 287
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ + GLDS+V N L+ Y C+R A VFD++ R+ VSWN +I C +N +A
Sbjct: 288 LVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDA 347
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
V F +M+ +PD T++ V+ A ++ + +W+H I + + TALIDM
Sbjct: 348 VRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDM 407
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG V AR+LF+ E +V TW+AMI G HG+ + A+ELF MK+ I PN TF
Sbjct: 408 YAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTF 467
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
L VL AC+HAG+V++G YF M+ +G++P HY TM D+L RAG L EA+ FI MP
Sbjct: 468 LSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMP 527
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
P V A+L A +H + E +++ EL P+ V++AN YA MW+
Sbjct: 528 MDPGLSVYGAMLGACKLHK---NVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKD 584
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
V+ VR M+ GL+K G S ++L IH FYSG + + IY L L +K + +
Sbjct: 585 VARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGY 644
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 155/320 (48%), Gaps = 15/320 (4%)
Query: 29 RQCLSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
R S LKLC ++ L +HAQ+ G+ ++A L + + AR +
Sbjct: 60 RTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANM--YAKCRRPADARRVF 117
Query: 86 CNYVNDSVPI----PWNNLIRGYAWSDRPREAVWVFIDMKRR-GIKPTEFTYPFVLKACA 140
D +P+ WN L+ GYA + R A+ + + M+ G +P T VL ACA
Sbjct: 118 -----DRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACA 172
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
L + A +SGL+ V ++ Y C R A VFD M ++ VSWN
Sbjct: 173 NARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNA 232
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
+I +N EA+ F +M + G + + ++L L AC ELG L G VH L+ G
Sbjct: 233 MIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIG 292
Query: 261 TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS 320
N + ALI MY+KC V A +F ++ +W+AMILG AQ+G +E+A+ LF+
Sbjct: 293 LDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFT 352
Query: 321 NMKNSSISPNYVTFLGVLCA 340
M+ ++ P+ T + V+ A
Sbjct: 353 RMQLENVKPDSFTLVSVIPA 372
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 124/254 (48%), Gaps = 3/254 (1%)
Query: 105 AWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDV 164
A SD P A+ F+ M G P T+ +LK CA L G V A + G+DS+
Sbjct: 36 ARSDLP-AALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEA 94
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL 224
L Y CRR DA +VFD M R V+WN ++ N A+ V+M++
Sbjct: 95 LAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEE 154
Query: 225 -GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G PD T++ VL AC L+ + H I G + TA++D Y KCG +
Sbjct: 155 EGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRA 214
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
AR++F M N +W+AMI G AQ+G + EAL LF+ M + V+ L L AC
Sbjct: 215 ARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGE 274
Query: 344 AGMVEDGYRYFHEM 357
G +++G R HE+
Sbjct: 275 LGCLDEGMR-VHEL 287
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 268/475 (56%), Gaps = 6/475 (1%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+S L C + + Q+HAQ+ +G+ +D + +L+ C + K+L A +L N + +
Sbjct: 7 ISTLFKCRNIFQIKQVHAQVTTTGIIHDLIVANKLLYMC--AKHKDLVTAH-LLFNKMEE 63
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
P+ W+ +I G+ + F ++ R G KP F+ PFV+KAC + GL G +
Sbjct: 64 RDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLI 123
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
+ V K+GL D + + LV Y C +A ++FD M ++ +V+ V+I E
Sbjct: 124 HSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKP 183
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
E+ F +M+ GF PD+ M+ +++AC +LG ++ + VH + R L+ +LGTA+
Sbjct: 184 NESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAM 243
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
IDMYAKCG++ +R +F RME+ NV +WSAMI HG EALELF M NS I PN
Sbjct: 244 IDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNR 303
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
+TF+ +L AC+HAG+V+DG + F M +G++P HY M D+L RAG L +A I
Sbjct: 304 ITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIE 363
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGM 451
NM + + + A L A IH Q + + + LL L+ + + ++++N YA G
Sbjct: 364 NMEVEKDEGIWCAFLGACRIH---RQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGR 420
Query: 452 WEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
W+ V+ +R M LKK+ G +W+E+ I+RF +G +S + IY++L++L+
Sbjct: 421 WKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLS 475
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 171/465 (36%), Positives = 253/465 (54%), Gaps = 6/465 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+H G +DA I L+ S+ L AR + VN SV + W +I YA
Sbjct: 158 QLHCHSTKLGFASDAYIQNTLMNM--YSNCGCLVSARKVFDKMVNKSV-VSWATMIGAYA 214
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
D P EA+ +F M+ +KP E T VL ACA L QV + ++G+
Sbjct: 215 QWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTV 274
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
+ L+ Y C A +F+ M E+++ WN++I VE+ EA+ F +M+ G
Sbjct: 275 LTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSG 334
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+ D+ TM +L ACT LG L LGKW+H+ + + ++ LGTAL+DMYAKCG++ A
Sbjct: 335 VKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAM 394
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F M E +V TW+A+I+GLA G +ALELF M+ S + P+ +TF+GVL AC+HAG
Sbjct: 395 RVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAG 454
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+V +G YF+ M + +GI+P HY M D+L RAG + EA I NMP P+ VL L
Sbjct: 455 LVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGL 514
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
LSA IH V ++L+EL+P+ V+++N Y+ + WE +R M
Sbjct: 515 LSACRIHGNLV---VAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVER 571
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+KK G S +E+GG +H F G S + + IY+ L+ + +K
Sbjct: 572 NIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLK 616
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/364 (34%), Positives = 187/364 (51%), Gaps = 5/364 (1%)
Query: 31 CLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
CL L+ C + L QIHAQ+ + L D ++V FC L S +L YAR + N +
Sbjct: 43 CLLSLEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVF-NQIP 101
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
+ N++IRGY + PR+A+ + M +G+ P FT+P + K+C L EG Q
Sbjct: 102 NPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGV---LCEGKQ 158
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+ + TK G SD Y N L+ Y +C A KVFD M +SVVSW +I +
Sbjct: 159 LHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDL 218
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
EA+ F +M+ +P+E T++ VL+AC +L K VH + E G + L +A
Sbjct: 219 PHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSA 278
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
L+D+Y KCG AR LF++M E N++ W+ MI G + EEAL LF+ M+ S + +
Sbjct: 279 LMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGD 338
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
VT +L AC H G +E G ++ H I+ + D+ A+ G ++ A
Sbjct: 339 KVTMASLLIACTHLGALELG-KWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVF 397
Query: 391 MNMP 394
MP
Sbjct: 398 QEMP 401
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 145/329 (44%), Gaps = 21/329 (6%)
Query: 136 LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRF-----YGSCRRKRDACKVFDDM 190
L+ C +S L Q+ A + ++ L D ++ + +V F GS R VF+ +
Sbjct: 47 LEKCTTMSQLK---QIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYAR---LVFNQI 100
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
+ + N II +A+ ++ M G +PD T + +C G L GK
Sbjct: 101 PNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEGK 157
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
+H + G + + L++MY+ CG + AR +F +M +V +W+ MI AQ
Sbjct: 158 QLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWD 217
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
EA++LF M+ +S+ PN +T + VL AC + +E + H+ GI +
Sbjct: 218 LPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETA-KQVHKYIDETGIGFHTVLT 276
Query: 371 HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVG--NEVRRRL 428
+ D+ + G A MP + N +++ + D+ Y++ + NE++
Sbjct: 277 SALMDVYCKCGCYPLARDLFNKMP-EKNLFCWNIMING-HVEDSDYEEALSLFNEMQLSG 334
Query: 429 LELEPRGSQNLVIVANKYA--EVGMWEKV 455
++ + +L+I E+G W V
Sbjct: 335 VKGDKVTMASLLIACTHLGALELGKWLHV 363
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 182/493 (36%), Positives = 259/493 (52%), Gaps = 25/493 (5%)
Query: 8 TTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELV 67
T + P KP + + LS L C S + L Q+HA +GL ++ L+
Sbjct: 9 TPAPLLPAKPKSPPP----QQHPVLSHLPHCTSLRTLAQLHAAAVKAGLAAHPALVTRLL 64
Query: 68 RFCTLSSS--KNLTYARSILCNYVNDSVPIP-----WNNLIRGYAWSDRPRE-----AVW 115
CT + +L YAR + D VP P +N L+RGYA S P AV
Sbjct: 65 TLCTGPDAGPAHLAYARQVF-----DRVPHPADAVWYNTLLRGYARSSNPSSSEAAAAVR 119
Query: 116 VFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYG 175
VF+ M G+ P +T+ +LKACA EG Q A K G Y L+ Y
Sbjct: 120 VFVRMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHALAVKLGAADHDYVRPTLINMYA 179
Query: 176 SCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLV 235
C R A +F VVS+N +I V + GEA+ F +M+ G +P T++
Sbjct: 180 ECGDARAARVMFGGTDGGCVVSYNAMIAAAVRSSRPGEALVLFREMQGKGLKPTSVTVIS 239
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
VLSAC LG L LG+WVH + + G ++ TALIDMYAKCG++ A +F ME +
Sbjct: 240 VLSACALLGALELGRWVHDYVRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMESKD 299
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
WS MI+ A HGY EA+ LF MK + P+ +TFLGVL AC+H+G+V +G +YF
Sbjct: 300 RQAWSVMIVAYANHGYGREAISLFEEMKKEGMKPDDITFLGVLYACSHSGLVSEGLQYFD 359
Query: 356 EMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAK 415
+M+ HGI P HY + D+LAR+G L+ AY FI +P P PI+ R LLSA H
Sbjct: 360 DMKD-HGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGH-GD 417
Query: 416 YQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSW 475
++ +G V R+L+L+ + VI +N A G WE+++ VR+ M G+ K+ G S
Sbjct: 418 FE--LGKRVFERILKLDDSHGGDYVIFSNLCANTGYWEEMNMVRKLMSEKGVVKVPGCSS 475
Query: 476 VELGGSIHRFYSG 488
+E+ ++H F++G
Sbjct: 476 IEIDNTVHEFFAG 488
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 167/460 (36%), Positives = 252/460 (54%), Gaps = 8/460 (1%)
Query: 48 HAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWS 107
H + GL D + L+ + + AR + + ++ + WN++I GY+
Sbjct: 150 HCSVIRRGLDEDGHVSHSLI--TMYARCGKMGDARKVF-DEISQKDLVSWNSMISGYSKM 206
Query: 108 DRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTN 167
EAV +F +M G +P E + VL AC E+ L G V+ V ++ + + +
Sbjct: 207 RHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMG 266
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
+ L+ YG C A ++FD M ++ V+WN +IT +N EA+ F M+
Sbjct: 267 SALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTA 326
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
PD+ T++ +LSAC +G L LGK V + ERG + +GTAL+DMYAKCG++ A +
Sbjct: 327 PDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRV 386
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN--SSISPNYVTFLGVLCACNHAG 345
F M N +W+AMI LA HG A+EAL LF +M N ++SPN +TF+GVL AC HAG
Sbjct: 387 FYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAG 446
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+V++G R FH M G+ P HY M D+ +RAGHL+EA+ F+M MP +P+ ++L AL
Sbjct: 447 LVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGAL 506
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
L A + + V + LLELEP S N VI + YA + W+ + +R MK
Sbjct: 507 LGACQ---KRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQK 563
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
G+ K G SW+++ +H F++G E I+QIL+ L
Sbjct: 564 GVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLL 603
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/404 (34%), Positives = 215/404 (53%), Gaps = 20/404 (4%)
Query: 14 PPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLS 73
P N N LS S L+ C S K L QIHAQ+ + + L ++
Sbjct: 20 PHSKPNPNRQALSDKFN--SLLQQCLSIKQLKQIHAQLLTNSIHKPNSFLYKIADL---- 73
Query: 74 SSKNLTYARSILCNYVNDSVPIPWNNLIRGY--AWSDRPREAVWVFIDMKRRGIKPTEFT 131
K+ YA N + D +N +IRG AW ++ A+ + MK G+KP T
Sbjct: 74 --KDFAYASVFFSNIL-DPTEYSFNVMIRGLSTAW-NKSSLALEFYSRMKFLGLKPNNLT 129
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
YPF+ AC+ + + G +V + GLD D + +++L+ Y C + DA KVFD++
Sbjct: 130 YPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEIS 189
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
++ +VSWN +I+ + GEAVG F +M + GF+P+E +++ VL AC ELG+L LG W
Sbjct: 190 QKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTW 249
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
V ++E LN +G+ALI MY KCG + AR +F M++ + TW+AMI G AQ+G
Sbjct: 250 VEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGM 309
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR---YFHEMEHVHGIKPMRI 368
+EEA++LF +M+ SS +P+ +T +G+L AC G ++ G + Y E G +
Sbjct: 310 SEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASE----RGFQDDVY 365
Query: 369 HYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
+ D+ A+ G L A+ MP N + A++SA + H
Sbjct: 366 VGTALVDMYAKCGSLDNAFRVFYGMP-NKNEVSWNAMISALAFH 408
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 160/438 (36%), Positives = 245/438 (55%), Gaps = 5/438 (1%)
Query: 78 LTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMK-RRGIKPTEFTYPFVL 136
L YAR I N VN + W+ +I GY D +A+ ++ DM G+ PT T +L
Sbjct: 261 LFYARKIF-NTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATML 319
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
+ACA+++ L G ++ ++ KSG+D D N+L+ Y C +A D+M + V
Sbjct: 320 RACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTV 379
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
S++ II+ CV+N + +A+ F +M+ G P TM+ +L AC+ L L G H
Sbjct: 380 SYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYT 439
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
+ RG + + A+IDMY+KCG + +R +F RM+ ++ +W+ MI+G HG EAL
Sbjct: 440 VVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEAL 499
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
LF ++ + P+ VT + VL AC+H+G+V +G +F M IKP HY M D+
Sbjct: 500 SLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDL 559
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGS 436
LARAG+L EAYTFI MPF PN + ALL+A H +G +V +++ L P G+
Sbjct: 560 LARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHK---NIEMGEQVSKKIQLLGPEGT 616
Query: 437 QNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELA 496
N V+++N Y+ VG W+ + +R ++ G KK G SWVE+ G IH F G+ S + A
Sbjct: 617 GNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSA 676
Query: 497 GIYQILETLNLHMKVLNF 514
I + L+ L + MK L +
Sbjct: 677 SINKKLQELLVQMKKLGY 694
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 143/287 (49%), Gaps = 12/287 (4%)
Query: 85 LCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACA 140
L +V D +P P WN +IR YAWS ++++++++ M + G+ PT FT+PF+LKAC+
Sbjct: 59 LARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACS 118
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC--ERSVVSW 198
+ L G + + GL D+Y + L+ Y C A +F+ + +R +V+W
Sbjct: 119 SLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAW 178
Query: 199 NVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
N +I + + + +M+ G P+ +T++ +L + L GK +H I
Sbjct: 179 NAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIR 238
Query: 259 RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALEL 318
N L TAL+DMYAKC + AR +F+ + + N WSAMI G H +AL L
Sbjct: 239 NFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALAL 298
Query: 319 FSNMKN-SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIK 364
+ +M ++P T +L AC ++ G + H H IK
Sbjct: 299 YDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKL-----HCHMIK 340
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 95/192 (49%), Gaps = 3/192 (1%)
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK 220
DSD L R++ S + A VFD + + SVV WN++I + +++ ++
Sbjct: 39 DSDA-AATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLH 97
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
M LG P T +L AC+ L L LG+ +H G ++ + TAL+ MYAKCG
Sbjct: 98 MLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGH 157
Query: 281 VGCARLLFSRM--EEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
+ A+ LF+ + ++ ++ W+AMI + H + + + M+ + ++PN T + +L
Sbjct: 158 LYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSIL 217
Query: 339 CACNHAGMVEDG 350
A + G
Sbjct: 218 PTIGQANALHQG 229
>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 170/486 (34%), Positives = 261/486 (53%), Gaps = 7/486 (1%)
Query: 32 LSFLKLCCSKKHLYQIHAQI-QVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
+S +K K L QIHA I + + +Q L+ L R ++ +Y++ +
Sbjct: 7 ISAIKSVSHKTRLLQIHAHIIRTTLIQYPTVSLQFLSRIALSGPLQDASYSQRFFGQLSH 66
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
V +N +IR + SD P++ + ++ DM+RRGI + F +K+C L G+Q
Sbjct: 67 PLVS-HYNTMIRACSMSDSPQKGLLLYRDMRRRGIAADPLSSSFAVKSCIRFLYLPGGVQ 125
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
V N+ K G D ++ Y C+R DACKVFD+M R V+WNV+I+ C+ N
Sbjct: 126 VHCNIFKDGHQWDTLLLTAVMDLYSLCQRGGDACKVFDEMPHRDTVAWNVMISCCIRNNR 185
Query: 211 LGEAVGYFVKMKDLGF--EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+A+ F M+ + EPD+ T L++L AC L L G+ +H ++ERG L
Sbjct: 186 TRDALSLFDVMQGSSYKCEPDDVTCLLLLQACAHLNALEFGERIHGYIMERGYRDALNLC 245
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
+LI MY++CG + A +F M NV +WSAMI GLA +GY EA+E F M +
Sbjct: 246 NSLISMYSRCGCLDKAYEVFKGMGNKNVVSWSAMISGLAMNGYGREAIEAFEEMLRIGVL 305
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
P+ TF GVL AC+++GMV++G +FH M G+ P HY M D+L RAG L +AY
Sbjct: 306 PDDQTFTGVLSACSYSGMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGRAGLLDKAYQ 365
Query: 389 FIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAE 448
IM+M +P+ + R LL A IH +G V L+EL+ + + + V++ N Y+
Sbjct: 366 LIMSMVVKPDSTMWRTLLGACRIHG---HVTLGERVIGHLIELKAQEAGDYVLLLNIYSS 422
Query: 449 VGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLH 508
G WEKV+ VR+ MKN ++ G S +EL G++H F S IY+ L+ +N
Sbjct: 423 AGHWEKVAEVRKLMKNKSIQTTPGCSTIELKGAVHEFVVDDVSHSRNREIYETLDEINHQ 482
Query: 509 MKVLNF 514
+++ +
Sbjct: 483 LRIAGY 488
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 166/465 (35%), Positives = 249/465 (53%), Gaps = 6/465 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
++H +I +GL+ + ++ LV + +++ A+ I +V + W LI GYA
Sbjct: 218 KVHMEIAKAGLELEPRVGTSLVGM--YAKCGDISKAQVIFDKLPEKNV-VTWTLLIAGYA 274
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ A+ + M++ + P + TY +L+ C L G +V + +SG +++
Sbjct: 275 QQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIW 334
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N L+ Y C ++A K+F D+ R VV+W ++T + + EA+ F +M+ G
Sbjct: 335 VVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQG 394
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+PD+ T L++C+ L GK +H QL+ G L+ L +AL+ MYAKCG++ AR
Sbjct: 395 IKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDAR 454
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
L+F++M E NV W+AMI G AQHG EALE F MK I P+ VTF VL AC H G
Sbjct: 455 LVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVG 514
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+VE+G ++F M +GIKPM HY D+L RAGHL+EA I+ MPFQP P V AL
Sbjct: 515 LVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGAL 574
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
LSA IH + G +L+L+P V ++N YA G +E VR+ M+
Sbjct: 575 LSACRIHSDVER---GERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKR 631
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+ K G SW+E+ G +H F+ S E IY L L +K
Sbjct: 632 DVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIK 676
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 154/289 (53%), Gaps = 7/289 (2%)
Query: 109 RPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNN 168
R +EA+ + M +G + + +L+ CA + L +G +V A + KSG+ + Y N
Sbjct: 76 RLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLEN 135
Query: 169 NLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEP 228
L+ Y C DA +VFD + +R++VSW +I V EA + MK G +P
Sbjct: 136 TLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKP 195
Query: 229 DETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLF 288
D+ T + +L+A T L +G+ VH+++ + G L ++GT+L+ MYAKCG + A+++F
Sbjct: 196 DKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIF 255
Query: 289 SRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVE 348
++ E NV TW+ +I G AQ G + ALEL M+ + ++PN +T+ +L C +E
Sbjct: 256 DKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALE 315
Query: 349 DG---YRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
G +RY + + I + + + + + G LKEA ++P
Sbjct: 316 HGKKVHRYIIQSGYGREIWVV----NALITMYCKCGGLKEARKLFGDLP 360
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 182/383 (47%), Gaps = 10/383 (2%)
Query: 34 FLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
L+ C + L Q +HA I SG+Q + + L+ + +LT AR + + +
Sbjct: 102 LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSM--YAKCGSLTDARRVF-DGIR 158
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
D + W +I + ++ EA + MK G KP + T+ +L A L G +
Sbjct: 159 DRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQK 218
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
V + K+GL+ + +LV Y C A +FD + E++VV+W ++I +
Sbjct: 219 VHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQ 278
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
+ A+ KM+ P++ T +L CT L GK VH +I+ G + A
Sbjct: 279 VDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNA 338
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
LI MY KCG + AR LF + +V TW+AM+ G AQ G+ +EA++LF M+ I P+
Sbjct: 339 LITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPD 398
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT-MADILARAGHLKEAYTF 389
+TF L +C+ +++G ++ VH + ++ + + + A+ G + +A
Sbjct: 399 KMTFTSALTSCSSPAFLQEGKSIHQQL--VHAGYSLDVYLQSALVSMYAKCGSMDDA-RL 455
Query: 390 IMNMPFQPNPIVLRALLSASSIH 412
+ N + N + A+++ + H
Sbjct: 456 VFNQMSERNVVAWTAMITGCAQH 478
>gi|242054761|ref|XP_002456526.1| hypothetical protein SORBIDRAFT_03g037820 [Sorghum bicolor]
gi|241928501|gb|EES01646.1| hypothetical protein SORBIDRAFT_03g037820 [Sorghum bicolor]
Length = 552
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 242/422 (57%), Gaps = 11/422 (2%)
Query: 91 DSVPIP----WNNLIRGYAWSDRPREAVW-VFIDMKRRGI-KPTEFTYPFVLKACAEISG 144
D +P P +N+LIR + V+ M R G +P FT F LKACA +
Sbjct: 82 DQIPDPTAFCYNSLIRALPAAGAAPAPALAVYRLMLRAGSPRPNTFTLAFALKACAAVPA 141
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC-ERSVVSWNVIIT 203
EG Q+ A + GL++ Y L+ Y C + A VFD M ++S+V+W+ +I
Sbjct: 142 PGEGRQLHAQALRQGLEASAYVQTGLLNLYAKCEQVALARTVFDGMAPDKSLVAWSAMIN 201
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
+ EA+G F +M+ +G EPDE TM+ V+SAC + G L LGKWVH + +G +
Sbjct: 202 GYSRVGMVTEALGLFREMQAVGVEPDEVTMVGVISACAKAGALDLGKWVHAYIDRKGITV 261
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
+ +L TALIDMYAKCG + AR +F M E + WSAMI+G A HG E+AL LFS M
Sbjct: 262 DLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRML 321
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+ PN VTF+GVL AC H+G+V+DG RY+ M+++ GIKP +Y M D+L R+G L
Sbjct: 322 ELKVRPNNVTFIGVLSACAHSGLVDDGRRYWSIMQNL-GIKPSMENYGCMIDLLCRSGLL 380
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
+AY+F+++MP PN I+ R LL A + + + +RLLELEP +N V+++
Sbjct: 381 DDAYSFVIDMPISPNSIIWRTLLVACK---SSNRIDIAESASKRLLELEPHNPENYVLLS 437
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N A W++VS +R+ MK+ + + G S +E+ G +H F DS E+ I +L
Sbjct: 438 NLCASNSQWDRVSYLRKKMKDSNVTAVAGCSSIEINGYLHEFVVSDDSHPEIKEIRLVLR 497
Query: 504 TL 505
+
Sbjct: 498 EI 499
>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 173/472 (36%), Positives = 260/472 (55%), Gaps = 18/472 (3%)
Query: 42 KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP----W 97
K L Q+HA + V+G +L +L+ S++ + Y + SVP+P +
Sbjct: 23 KQLQQVHAHLIVTGYGRSRSLLTKLITLAC--SARAIAYTHLLFL-----SVPLPDDFLF 75
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N++I+ + P V + M + P+ +T+ V+K+CA++S L G V +
Sbjct: 76 NSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVV 135
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
SG D Y LV FY C A +VFD M E+S+V+WN +++ +N EA+
Sbjct: 136 SGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQV 195
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
F +M++ GFEPD T + +LSAC + G +SLG WVH +I G LN +LGTALI++Y++
Sbjct: 196 FYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSR 255
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS-SISPNYVTFLG 336
CG VG AR +F +M+E NV W+AMI HGY ++A+ELF+ M++ PN VTF+
Sbjct: 256 CGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVA 315
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
VL AC HAG+VE+G + M + + P H+ M D+L RAG L EAY FI +
Sbjct: 316 VLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDAT 375
Query: 397 PN---PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
P + A+L A +H Y GV E+ +RL+ LEP + V+++N YA G +
Sbjct: 376 GKATAPALWTAMLGACKMHR-NYDLGV--EIAKRLIALEPDNPGHHVMLSNIYALSGKTD 432
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+VS++R M L+K G S +E+ + F G +S E IY+ LETL
Sbjct: 433 EVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETL 484
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 172/474 (36%), Positives = 254/474 (53%), Gaps = 38/474 (8%)
Query: 73 SSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
S++ NLT ++ YV+ + WN++I A S EA+ F M++ +KP T+
Sbjct: 23 SNNPNLT---TLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTF 79
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDA--------- 183
P +K+C+ + L+ G Q G + D++ ++ LV Y C RDA
Sbjct: 80 PCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISH 139
Query: 184 ----------------------CKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
+VFD M ER V+SWN II V +N E++ F +M
Sbjct: 140 RNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRM 199
Query: 222 -KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
KD + T+ VL AC G+ LGK +H Q+I+ G N +GT++IDMY KCG
Sbjct: 200 VKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGK 259
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
V AR F RM E NV +WSAM+ G HG+A+EALE+F M + + PNY+TF+ VL A
Sbjct: 260 VEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAA 319
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPI 400
C+HAG++E+G+ +F M H ++P HY M D+L RAG+LKEA+ I M +P+ +
Sbjct: 320 CSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFV 379
Query: 401 VLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRR 460
V ALL A +H K D +G R+L EL+P+ V+++N YA+ G WE V +R
Sbjct: 380 VWGALLGACRMH--KNVD-LGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRI 436
Query: 461 FMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
MKN GL K G S V++ G +H F G + IY+ LE L++ ++ + +
Sbjct: 437 LMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGY 490
>gi|147833682|emb|CAN62088.1| hypothetical protein VITISV_030648 [Vitis vinifera]
Length = 583
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 178/465 (38%), Positives = 258/465 (55%), Gaps = 11/465 (2%)
Query: 21 NSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTY 80
NSD + R+ L FL C L Q+HAQ + + R SS +L Y
Sbjct: 19 NSDSXTHHRRLLLFLNSCTCMSQLKQLHAQTIRTTSSHHPNTFFLYSRILHFSSLHDLRY 78
Query: 81 ARSILCNYVNDSVPIPWNNLIRGYAWS-DRPREAVWVFIDMKRRG-IKPTEFTYPFVLKA 138
A + + + + WN LIR A S DR + A+ ++ M +G + + T+PFVLKA
Sbjct: 79 AFRVF-HQIENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFVLKA 137
Query: 139 CAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSW 198
CA + L+EG Q+ A + K G DSBVY NN+LV FY +C R A VFD M ERS+VSW
Sbjct: 138 CAYLFALSEGEQIHAQILKLGFDSBVYINNSLVHFYATCDRLDFAKGVFDRMSERSLVSW 197
Query: 199 NVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
NV+I V A+ F +M+ FEPD T+ + +AC +G+LSLG W H+ L++
Sbjct: 198 NVVIDAFVRFGEFDAALNLFGEMQKF-FEPDGYTIQSIANACAGMGSLSLGMWAHVFLLK 256
Query: 259 R---GTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEA 315
+ V + L T+L+DMY KCG++ A LF RM + +V +W++MILG + HG A
Sbjct: 257 KXDADRVNDVLLNTSLVDMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAA 316
Query: 316 LELFSNM-KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMA 374
LE F M + + PN +TF+GVL ACNH G+V +G RYF M + IKP HY +
Sbjct: 317 LEYFGCMVRTEKLMPNAITFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLV 376
Query: 375 DILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPR 434
D+LARAG + EA + NMP +P+ ++ R+LL A +A + + E+ R+LE E
Sbjct: 377 DLLARAGLIDEALDVVSNMPMRPDLVIWRSLLDACCKQNAGVE--LSEEMASRVLEAEGG 434
Query: 435 GSQNL-VIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVEL 478
+ V+++ YA W V VR+ M + G+ K G S +E+
Sbjct: 435 VCSGVYVLLSRVYASASRWNDVGMVRKLMTDKGVVKEPGCSSIEI 479
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 158/418 (37%), Positives = 247/418 (59%), Gaps = 11/418 (2%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKP-TEFTYPFVLKACAEISGLNEGMQVQANV 155
WN +IRGY+ SD PREA+ +++ M +GI P FT+PF+L +CA +S L G +V +++
Sbjct: 2 WNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHI 61
Query: 156 TKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
K G +SD++ N L+ Y A +FD+ R +VS+N +I E A+
Sbjct: 62 IKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESAL 121
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNCQLGTALIDM 274
F +M++ DE T++ VLSAC LG LGK ++ Q IE G N L A++DM
Sbjct: 122 CLFGEMQN----SDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDM 177
Query: 275 YAKCGAVGCARLLFSRMEE--INVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
YAKCG++ A +F R+ + + +++MI GLAQHG E A+ +F + ++ + P+ V
Sbjct: 178 YAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEV 237
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
TF+GVLCAC H+G++E+G + F M + +GIKP HY M D+L R G L+EAY +
Sbjct: 238 TFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQK 297
Query: 393 MPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMW 452
MPF+ N ++ RALLSA H +G ++LLE+E + V+++N A+ W
Sbjct: 298 MPFEANSVIWRALLSACRTHG---NVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQW 354
Query: 453 EKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
E+ VR+ M++ G++K G S++ELGG+IHRF + S + I +L+ + + +K
Sbjct: 355 EEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLK 412
>gi|449435366|ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 179/510 (35%), Positives = 281/510 (55%), Gaps = 16/510 (3%)
Query: 4 FPVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQ-IQVSGLQNDAQI 62
+PT + P + NS + + L L C L QIHAQ I+ N +
Sbjct: 3 LAIPTNSQSLPIEIKGENSK--THQSRFLHLLTDCTDLSKLKQIHAQAIRNFSTHNSSLF 60
Query: 63 LKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWS-DRPREAVWVFIDMK 121
L R +SS + YA + N +++ WN LI A S DR +A+ +F M
Sbjct: 61 LYS--RILHVSSLIDFDYACRVF-NQIDNPNSFMWNTLIGACARSLDRKEQAIEIFYRML 117
Query: 122 RRG-IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRK 180
G ++P + T+PF+LKACA + L+EG Q A + K GLD DVY N+L+ Y SC
Sbjct: 118 EEGSVEPDKHTFPFLLKACAYVFALSEGRQAHAQIFKLGLDLDVYVGNSLIHLYASCGCL 177
Query: 181 RDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
A KVF+ M RS+VSWNV+I V++ A+ FV+M++ FEPD TM ++SAC
Sbjct: 178 SMALKVFEKMPLRSLVSWNVMIDAYVQSGLFENALKLFVEMQN-SFEPDGYTMQSIVSAC 236
Query: 241 TELGNLSLGKWVHLQLIERGT---VLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVW 297
+G LSLG W H ++ + + + + ++L+DMY+KCG++ A+ +F M + ++
Sbjct: 237 AGIGALSLGMWAHAYVLRKASGAMAGDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLN 296
Query: 298 TWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
+W++MIL LA HG + AL+ FS + + PN VTF+GVL ACNH GMV DG +YF
Sbjct: 297 SWNSMILALAMHGRGQAALQCFSRLVEMEKFLPNSVTFVGVLSACNHGGMVADGRKYFDM 356
Query: 357 MEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKY 416
M + + I+P HY + D+L+R+G + EA + NM +P+ ++ R+LL A +A
Sbjct: 357 MVNDYKIEPRLEHYGCLVDLLSRSGFIDEALELVANMHIKPDAVIWRSLLDACYKQNAGV 416
Query: 417 QDGVGNEVRRRLLELEPRGSQNL-VIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSW 475
+ + EV ++L+ E S + V+++ YA W V +R+ M ++G+ K G S
Sbjct: 417 E--LSEEVAFKILQSEKTISSGVYVMLSRVYASARQWNDVGIIRKVMTDMGVTKEPGCSS 474
Query: 476 VELGGSIHRFYSGYDSQVELAGIYQILETL 505
+E+ G H F++G S + IY +++ +
Sbjct: 475 IEIDGISHEFFAGDTSHPRIKEIYGVIDLI 504
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 167/457 (36%), Positives = 248/457 (54%), Gaps = 8/457 (1%)
Query: 48 HAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWS 107
H + +GL D + L+ + + +AR + + + D + WN++I GY+
Sbjct: 151 HCLVFKAGLDGDEYVNHSLITM--YARCGEMGFARKVF-DEMGDRDLVSWNSMISGYSKM 207
Query: 108 DRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTN 167
+EA+ +F++M+ G +P E T VL AC ++ L G V+ V + ++ + Y
Sbjct: 208 GFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMG 267
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
+ L+ YG C A +VFD M + VV+WN IIT +N EA+ F M++ G
Sbjct: 268 SALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPH 327
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
PD TM+ VLSAC+ +G L LGKWV E+G + + +ALIDMYAKCG++ A +
Sbjct: 328 PDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRV 387
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK--NSSISPNYVTFLGVLCACNHAG 345
F M N +W+AMI LA HG A+EAL LF M N ++ PN +TF+GVL AC HAG
Sbjct: 388 FESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAG 447
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+V++G + F M G+ P HY M D+ ARAG L EA+ I MP +P+ IVL +L
Sbjct: 448 LVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSL 507
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
L A + VG V + LE+E S N VI + YA + W+ + +R M+
Sbjct: 508 LGACQ---RRRNADVGERVIQLFLEMELSNSGNYVISSKIYANMRRWDDSAKMRVLMRQC 564
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQIL 502
G+ K G SW+++G +H F++G IYQ+L
Sbjct: 565 GVSKTPGCSWIDIGAHVHEFHAGDSLHNHSMNIYQLL 601
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 218/386 (56%), Gaps = 10/386 (2%)
Query: 28 ARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
+ LS +K C SK L QIHAQ+ ++ + +L +++ K+L YA S++ N
Sbjct: 33 TEKLLSLIKQCKSKNLLKQIHAQMLINSIPKPNFLLSKIIDL------KDLAYA-SLVFN 85
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPRE-AVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
+ +N ++RG A + + + V ++ +K G+K FTYPF+ AC + GL
Sbjct: 86 QLTKPNIYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLV 145
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G V K+GLD D Y N++L+ Y C A KVFD+M +R +VSWN +I+
Sbjct: 146 HGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYS 205
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+ + EA+G F++M++ GFEPDE T++ VL AC +LG+L LG+WV ++E+ +N
Sbjct: 206 KMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSY 265
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+G+ALIDMY KCG + AR +F M +V TW+A+I G AQ+G + EA+ LF+ M+ +
Sbjct: 266 MGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAG 325
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
P+ VT + VL AC+ G ++ G ++ G++ + D+ A+ G L +A
Sbjct: 326 PHPDRVTMIEVLSACSTIGALDLG-KWVETHASEKGLQHDVYVASALIDMYAKCGSLDDA 384
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIH 412
+MP + N + A++SA + H
Sbjct: 385 VRVFESMPHK-NEVSWNAMISALAFH 409
>gi|224139652|ref|XP_002323212.1| predicted protein [Populus trichocarpa]
gi|222867842|gb|EEF04973.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 166/482 (34%), Positives = 269/482 (55%), Gaps = 6/482 (1%)
Query: 26 SKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
SKA L+ L+ C + L +I A + V+GLQN I ++ FC +S S +L YA+ +
Sbjct: 7 SKANAILTVLQGCNNLTRLKKIQAHVIVNGLQNHPAISNSILNFCAVSISGSLPYAQHLF 66
Query: 86 CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIK-PTEFTYPFVLKACAEISG 144
+ +N WN++IRG+A S P +A++ + M + P FT+ F LKAC I
Sbjct: 67 RHILNPQTQ-AWNSIIRGFAQSPSPVQAIFYYNRMLFDSVSGPDTFTFSFTLKACERIKA 125
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L + +V ++ ++G + DV LVR YG A VFD+M ER +V+WN +I+
Sbjct: 126 LKKCEEVHGSIIRTGYERDVVVCTGLVRCYGRNGCVEIARMVFDNMPERDLVAWNAMISC 185
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
+ + EA+ + M++ D T++ +LS+C+ +G L++G +H E+G + N
Sbjct: 186 YSQAGYHQEALRVYDYMRNENVGVDGFTLVGLLSSCSHVGALNMGVKLHRIASEKGLLRN 245
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+G ALIDMYAKCG++ A +F+ M + +TW++MI+G HG+ +EA+ F+ M
Sbjct: 246 VFVGNALIDMYAKCGSLDGALEVFNGMPR-DAFTWNSMIVGFGVHGFGDEAIYFFNQMLE 304
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ + PN + FLG+LC C+H G+VE+G +FH+M +KP HY + D+ RAG L+
Sbjct: 305 AGVRPNSIAFLGLLCGCSHQGLVEEGVEFFHQMSSKFNVKPGIKHYGCIVDMYGRAGKLE 364
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
+A I + P+Q +P++ R LLS+S IH +G R L +L + + V++A
Sbjct: 365 KALEIIGDSPWQDDPVLWRILLSSSKIHKNVV---IGEIAMRNLSQLGAVNAGDCVLLAT 421
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILET 504
YA + V+ +R+ +K G+K G SW+E+ +HRF S + IYQ LE
Sbjct: 422 IYAGANDEQGVARMRKLIKKQGIKTTPGWSWIEVSDQVHRFVVDDKSHPDSEMIYQKLEE 481
Query: 505 LN 506
+
Sbjct: 482 VT 483
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 171/465 (36%), Positives = 245/465 (52%), Gaps = 6/465 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+IH SG + I LV S L AR + + +V + WN++I Y
Sbjct: 257 EIHGYAMRSGFDSLVNISTALVDMYAKCGS--LETARQLFDGMLERNV-VSWNSMIDAYV 313
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
++ P+EA+ +F M G+KPT+ + L ACA++ L G + + GLD +V
Sbjct: 314 QNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVS 373
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N+L+ Y C+ A +F + R++VSWN +I +N +A+ YF +M+
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT 433
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+PD T + V++A EL KW+H ++ N + TAL+DMYAKCGA+ AR
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR 493
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
L+F M E +V TW+AMI G HG+ + ALELF M+ +I PN VTFL V+ AC+H+G
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSG 553
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+VE G + F+ M+ + I+ HY M D+L RAG L EA+ FIM MP +P V A+
Sbjct: 554 LVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAM 613
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
L A IH + RL EL P V++AN Y MWEKV VR M
Sbjct: 614 LGACQIHK---NVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQ 670
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
GL+K G S VE+ +H F+SG + + IY LE L H+K
Sbjct: 671 GLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIK 715
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 167/337 (49%), Gaps = 21/337 (6%)
Query: 34 FLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
LK+C + L +IH + SG D + L + + + AR +
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM--YAKCRQVNEARKVF----- 193
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P + WN ++ GY+ + R A+ + M +KP+ T VL A + + ++
Sbjct: 194 DRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLIS 253
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G ++ +SG DS V + LV Y C A ++FD M ER+VVSWN +I V
Sbjct: 254 VGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYV 313
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+N EA+ F KM D G +P + +++ L AC +LG+L G+++H +E G N
Sbjct: 314 QNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVS 373
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+ +LI MY KC V A +F +++ + +W+AMILG AQ+G +AL FS M++ +
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT 433
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
+ P+ T++ V+ A + H + +HG+
Sbjct: 434 VKPDTFTYVSVITAIAELSIT-------HHAKWIHGV 463
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 166/325 (51%), Gaps = 6/325 (1%)
Query: 34 FLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILCNYVNDS 92
L+ C S K L QI + +GL + +LV FC S AR + ++
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEA--AR--VFEPIDSK 98
Query: 93 VPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQ 152
+ + ++ +++G+A +A+ F+ M+ ++P + + ++LK C + + L G ++
Sbjct: 99 LNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 158
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
+ KSG D++ L Y CR+ +A KVFD M ER +VSWN I+ +N
Sbjct: 159 GLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMAR 218
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
A+ M + +P T++ VL A + L +S+GK +H + G + TAL+
Sbjct: 219 MALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALV 278
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
DMYAKCG++ AR LF M E NV +W++MI Q+ +EA+ +F M + + P V
Sbjct: 279 DMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 338
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEM 357
+ +G L AC G +E G R+ H++
Sbjct: 339 SVMGALHACADLGDLERG-RFIHKL 362
>gi|297733959|emb|CBI15206.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/382 (42%), Positives = 226/382 (59%), Gaps = 5/382 (1%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN +IRG + +P +A + M+ +G FTY F++K C ++ G Q+ NV
Sbjct: 19 WNTMIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKVCGQLGSDLLGKQIHCNVL 78
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
K GL+ V+ N LV YG + A +F++M + +V+WN II V EA+
Sbjct: 79 KHGLEEHVFVRNTLVHMYGMFKDIEAATHLFEEMPKSYLVAWNTIIDCNVYCGRYKEAIE 138
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F +M G +PD+ T +V LSAC LG L +G+ VH + G + +LIDMYA
Sbjct: 139 LFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVHSCIDHTGLGNVVSVSNSLIDMYA 198
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI-SPNYVTFL 335
KCG V A +F++M+ N+ +W+ MILGLA HG+ +EALELFS M + +PN VTFL
Sbjct: 199 KCGVVEAAYEIFNKMKGRNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATPNEVTFL 258
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPF 395
GVLCAC+H GMVE+G RYF M + I+P HY +M DIL RAG ++EAY I +MP
Sbjct: 259 GVLCACSHGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPI 318
Query: 396 QPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKV 455
+ N IV R LL+A +H + +VR++LLELEP S + V++AN YA G W KV
Sbjct: 319 ESNSIVWRTLLAACRVHG---NLELAEQVRQQLLELEPDHSSDYVLLANMYASAGQWNKV 375
Query: 456 SNVRRFMKNVGLKKMK-GMSWV 476
VR+ M G++K K G S++
Sbjct: 376 VRVRKSMHIRGVQKPKPGNSYI 397
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 127/274 (46%), Gaps = 8/274 (2%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIH + GL+ + LV + A + L + S + WN +I
Sbjct: 72 QIHCNVLKHGLEEHVFVRNTLVHMYGMFKD---IEAATHLFEEMPKSYLVAWNTIIDCNV 128
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ R +EA+ +F M + G+KP + T+ L ACA + L+ G +V + + +GL + V
Sbjct: 129 YCGRYKEAIELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVHSCIDHTGLGNVVS 188
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
+N+L+ Y C A ++F+ M R++VSWN +I + EA+ F KM +
Sbjct: 189 VSNSLIDMYAKCGVVEAAYEIFNKMKGRNIVSWNTMILGLAMHGHGDEALELFSKMLEEK 248
Query: 226 F-EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG--TALIDMYAKCGAVG 282
P+E T L VL AC+ G + G+ + ++ R + + +++D+ + G V
Sbjct: 249 LATPNEVTFLGVLCACSHGGMVEEGRR-YFDIMRRDYNIQPTIKHYGSMVDILGRAGLVE 307
Query: 283 CA-RLLFSRMEEINVWTWSAMILGLAQHGYAEEA 315
A RL+ S E N W ++ HG E A
Sbjct: 308 EAYRLIKSMPIESNSIVWRTLLAACRVHGNLELA 341
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 169/440 (38%), Positives = 244/440 (55%), Gaps = 6/440 (1%)
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
+++YAR + + ++ P WN +++GY + P +AV V+ M+ G++P FT+PFV+
Sbjct: 84 DMSYARQLF-DEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
KACAE++ L G+ + +V K GL+ L+ Y A +F M ER +V
Sbjct: 143 KACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLV 202
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
+WN +I VCV+ + +A+ F +M G +PD T++ LSAC LG L G+ ++
Sbjct: 203 AWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFA 262
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
E G N + A +DM AKCG + A LF M + NV +WS +I G A +G +E+AL
Sbjct: 263 REEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKAL 322
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHV--HGIKPMRIHYHTMA 374
LFS MKN + PNYVTFL VL AC+H G V +G++YF+ M I+P + HY M
Sbjct: 323 ALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMV 382
Query: 375 DILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPR 434
D+L R+GHL+EAY FI MP + +P + ALL A +IH +G V L EL P
Sbjct: 383 DLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIHQ---NIKLGQHVADLLFELAPE 439
Query: 435 GSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVE 494
+ V+++N YA G W V VR+ MK G +K+ S VE G IH Y G S +
Sbjct: 440 IASYHVLLSNMYAAAGRWHCVEKVRQRMKKKGARKVAAYSSVEFNGEIHILYGGDKSHPQ 499
Query: 495 LAGIYQILETLNLHMKVLNF 514
A I LE L MK + +
Sbjct: 500 SASILAKLEDLLKQMKSMGY 519
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 172/477 (36%), Positives = 244/477 (51%), Gaps = 9/477 (1%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S L+ C S L QIH Q+ +G Q + + L+ + L A IL
Sbjct: 420 SILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDM--YAKHGKLDTAHVILRTLT 477
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
D V + W LI GYA + EA+ F +M RGI+ + + ACA I LN+G
Sbjct: 478 EDDV-VSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGR 536
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ A SG D+ N LV Y C R ++A F+ + + +SWN +I+ ++
Sbjct: 537 QIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSG 596
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+ +A+ F +M E T +SA + N+ GK +H +I+RG + ++
Sbjct: 597 YCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSN 656
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
ALI YAKCG++ AR F M E N +W+AMI G +QHGY EA+ LF MK P
Sbjct: 657 ALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMP 716
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
N+VTF+GVL AC+H G+V G YF M HG+ P HY + D+++RAG L A F
Sbjct: 717 NHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKF 776
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
I MP +P+ + R LLSA ++H VG + LLELEP S V+++N YA
Sbjct: 777 IEEMPIEPDATIWRTLLSACTVHK---NVEVGEFAAQHLLELEPEDSATYVLLSNMYAVS 833
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
G W+ R+ M+N G+KK G SW+E+ S+H FY G IY+ L LN
Sbjct: 834 GKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELN 890
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 201/437 (45%), Gaps = 19/437 (4%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S L C S L Q+H+ + +G+ +D + L+ S ++ A +
Sbjct: 319 SLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCS--DIKTAHEMFLTAQ 376
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
++V + WN ++ + D E+ +F M+ +G+ P +FTYP +L+ C + L+ G
Sbjct: 377 TENV-VLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGE 435
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ V K+G +VY + L+ Y + A + + E VVSW +I+ ++
Sbjct: 436 QIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHN 495
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
EA+ +F +M + G + D +SAC + L+ G+ +H Q G + +G
Sbjct: 496 LFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGN 555
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
AL+ +YA+CG + A L F +++ + +W+ +I G AQ GY E+AL++F+ M + +
Sbjct: 556 ALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEA 615
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
++ TF + A + ++ G + H M G + + A+ G +++A
Sbjct: 616 SFFTFGSAVSAAANIANIKQG-KQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARRE 674
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
MP + N + A+++ S H G GNE +++ G + N V
Sbjct: 675 FCEMP-EKNDVSWNAMITGYSQH------GYGNEAVNLFEKMKQVGE-----MPNHVTFV 722
Query: 450 GMWEKVSNVRRFMKNVG 466
G+ S+V K +G
Sbjct: 723 GVLSACSHVGLVTKGLG 739
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 167/353 (47%), Gaps = 8/353 (2%)
Query: 39 CSKKHLY----QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP 94
C+K L+ Q+HA + G + + LV S N A + +
Sbjct: 223 CTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTL--YSRMPNFVSAEKVFSK-MQSKDE 279
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ +N+LI G A A+ +F MKR +KP T +L ACA L +G Q+ +
Sbjct: 280 VSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSY 339
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V K+G+ SD+ L+ Y +C + A ++F +VV WNV++ + L E+
Sbjct: 340 VIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSES 399
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
F +M+ G P++ T +L CT +G L LG+ +H Q+I+ G N + + LIDM
Sbjct: 400 FRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDM 459
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAK G + A ++ + E +V +W+A+I G AQH EAL+ F M N I + + F
Sbjct: 460 YAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGF 519
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
+ AC + G R H +V G + + + AR G +KEAY
Sbjct: 520 SSAISACAGIQALNQG-RQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAY 571
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 180/402 (44%), Gaps = 21/402 (5%)
Query: 42 KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY-VNDSVPIPWNNL 100
++ QIHA+I GL I L+ + + + AR + N DSV W +
Sbjct: 129 RYAEQIHARIICHGLLCSPIISNPLIGL--YAKNGLIISARKVFDNLCTKDSVS--WVAM 184
Query: 101 IRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGL 160
I G++ + EA+ +F +M GI PT + + VL C +I + G Q+ A V K G
Sbjct: 185 ISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGS 244
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK 220
+ Y N LV Y A KVF M + VS+N +I+ + + A+ F K
Sbjct: 245 SLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTK 304
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
MK +PD T+ +LSAC G L G+ +H +I+ G + + AL+D+Y C
Sbjct: 305 MKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSD 364
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
+ A +F + NV W+ M++ + E+ +F M+ + PN T+ +L
Sbjct: 365 IKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRT 424
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKP-MRIHYH---TMADILARAGHLKEAYTFIMNMPFQ 396
C G ++ G E H IK + + + + D+ A+ G L A+ + + +
Sbjct: 425 CTSVGALDLG-----EQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLT-E 478
Query: 397 PNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQN 438
+ + AL+S + H+ + E + E+ RG Q+
Sbjct: 479 DDVVSWTALISGYAQHN------LFAEALKHFKEMLNRGIQS 514
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 172/373 (46%), Gaps = 10/373 (2%)
Query: 34 FLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
L LC + L + +H +I G N++ + +LV + +L + + N
Sbjct: 16 LLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVD--VYFALGDLDGVVKVFEDMPN 73
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACA-EISGLNEGM 149
SV W+ +I G+ + +F M + PTE ++ VL+AC+ G+
Sbjct: 74 RSVR-SWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAE 132
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ A + GL +N L+ Y A KVFD++C + VSW +I+ +N
Sbjct: 133 QIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNG 192
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+ EA+ F +M G P VLS CT++ +G+ +H + + G+ L +
Sbjct: 193 YEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCN 252
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
AL+ +Y++ A +FS+M+ + +++++I GLAQ G+++ ALELF+ MK + P
Sbjct: 253 ALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKP 312
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
+ VT +L AC G + G + H GI I + D+ +K A+
Sbjct: 313 DCVTVASLLSACASNGALCKGEQ-LHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHE- 370
Query: 390 IMNMPFQPNPIVL 402
M + Q +VL
Sbjct: 371 -MFLTAQTENVVL 382
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 109/233 (46%), Gaps = 3/233 (1%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M+ RGI TY ++L C L E ++ + K G ++ N LV Y +
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
KVF+DM RSV SW+ II+ +E + F M + P E + VL A
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120
Query: 240 CT--ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVW 297
C+ +G + + +H ++I G + + + LI +YAK G + AR +F + +
Sbjct: 121 CSGHRIG-IRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSV 179
Query: 298 TWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
+W AMI G +Q+GY EEA+ LF M + I P F VL C + + G
Sbjct: 180 SWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVG 232
>gi|297823173|ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325308|gb|EFH55728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 583
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 171/472 (36%), Positives = 261/472 (55%), Gaps = 18/472 (3%)
Query: 42 KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP----W 97
K L Q+HA + V+ +L +L+ S++ + Y + SVP+P +
Sbjct: 23 KQLQQVHAHLIVTSYGRSRSLLTKLITLAC--SARAIAYTHLLFL-----SVPLPDDFLF 75
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N++I+ + P V + M + P+ +T+ V+K+CA++S L G V +
Sbjct: 76 NSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALKIGKGVHCHAVV 135
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
SG D Y LV FY C A +VFD M E+SVV+WN +++ +N +A+
Sbjct: 136 SGFGLDTYVQAALVTFYSKCGDMEAARQVFDRMPEKSVVAWNSLVSGFEQNGLAEDAIRV 195
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
F +M++ GFEPD T + +LSAC + G +SLG WVH ++ G +N +LGTALI++Y++
Sbjct: 196 FYQMRESGFEPDSATFVSLLSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALINLYSR 255
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS-PNYVTFLG 336
CG VG AR +F +M+E NV W+AMI HGY ++A++LF+ M++ S PN VTF+
Sbjct: 256 CGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGSIPNNVTFVA 315
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
VL AC HAG+VEDG + M + + P H+ + D+L RAG L EAY FI +
Sbjct: 316 VLSACAHAGLVEDGRSVYKRMTESYRLIPGVEHHVCIVDMLGRAGFLDEAYRFIQQLDAT 375
Query: 397 PN---PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
N P + A+L A +H Y GV E+ +RL+ LEP + V+++N YA G +
Sbjct: 376 GNATAPALWTAMLGACKMHR-NYDLGV--EIAKRLIALEPENPGHHVMLSNIYALSGKTD 432
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+VS++R M L+K G S +E+ + F G +S E IY+ LETL
Sbjct: 433 EVSHIRDRMMRNNLRKQVGYSIIEVENKTYLFSMGDESHQETGEIYRYLETL 484
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 169/430 (39%), Positives = 251/430 (58%), Gaps = 11/430 (2%)
Query: 78 LTYARSILCNYVNDSV--PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFV 135
L YA ++L + P P N ++R A S RPR A+ + +RR P TYP +
Sbjct: 754 LRYAVAVLSRLLPHGPLDPFPLNTVLRIAAGSPRPRVALELH---RRRLALPDTHTYPPL 810
Query: 136 LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC--ER 193
++ACA + L EG + A K+G + V+ N+LV YG+C A KVFD+M R
Sbjct: 811 IQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGR 870
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
++VSWN ++ N E + F +M + F PD T++ VL+AC E G L+LG+ VH
Sbjct: 871 NLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVH 930
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYA 312
+ + + G V N + ALID+YAKCG+V AR +F M V +W+++I+GLA +G+
Sbjct: 931 VYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFG 990
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
+EALELFS M+ + P +T +GVL AC+H G+V+DG+RYF M+ +GI P H
Sbjct: 991 KEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGC 1050
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELE 432
M D+L RAG ++EAY +I+ MP +PN +V R LL + ++H + +G RL+EL+
Sbjct: 1051 MVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHK---KLELGKVAWERLVELD 1107
Query: 433 PRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQ 492
P S + V+++N YA VGMW V +R+ M ++K G S VEL S++ F G S
Sbjct: 1108 PGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVELRNSVYEFVMGDRSH 1167
Query: 493 VELAGIYQIL 502
E IY++L
Sbjct: 1168 PESEQIYEML 1177
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 172/465 (36%), Positives = 243/465 (52%), Gaps = 6/465 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+IH +G + I LV S L AR + + +V + WN++I Y
Sbjct: 257 EIHGYAMRAGFDSLVNIATALVDMYAKCGS--LKTARLLFDGMLERNV-VSWNSMIDAYV 313
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
++ P+EA+ +F M G+KPT+ + L ACA++ L G + + LD +V
Sbjct: 314 QNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVS 373
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N+L+ Y C+ A +F + R++VSWN +I +N EA+ YF +M+
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQART 433
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+PD T + V++A EL KW+H ++ N + TAL+DMYAKCGA+ AR
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIAR 493
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
L+F M E +V TW+AMI G HG + ALELF M+ +I PN VTFL V+ AC+H+G
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSG 553
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+VE G + FH M+ + I+P HY M D+L RAG L EA+ FIM MP +P V A+
Sbjct: 554 LVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAM 613
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
L A IH +V RL EL P V++AN Y MWEKV VR M
Sbjct: 614 LGACQIHK---NVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQ 670
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
GL+K G S VE+ +H F+SG + IY LE L +K
Sbjct: 671 GLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIK 715
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 164/325 (50%), Gaps = 6/325 (1%)
Query: 34 FLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILCNYVNDS 92
L+ C S K L I I +GL + +LV FC S AR + ++
Sbjct: 43 LLERCSSLKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEA--AR--VFEPIDKK 98
Query: 93 VPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQ 152
+ + + +++G+A +A+ F+ M+ ++P + + ++LK C + + L G ++
Sbjct: 99 LNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIH 158
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
+ KSG D++ L Y CR+ +A KVFD M ER +VSWN I+ +N
Sbjct: 159 GLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMAR 218
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
A+ M + +P T++ VL A + L + +GK +H + G + TAL+
Sbjct: 219 MALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALV 278
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
DMYAKCG++ ARLLF M E NV +W++MI Q+ +EA+ +F M + + P V
Sbjct: 279 DMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDV 338
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEM 357
+ +G L AC G +E G R+ H++
Sbjct: 339 SVMGALHACADLGDLERG-RFIHKL 362
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 163/337 (48%), Gaps = 21/337 (6%)
Query: 34 FLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
LK+C + L +IH + SG D + L + + + AR +
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM--YAKCRQVHEARKVF----- 193
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P + WN ++ GY+ + R A+ + M +KP+ T VL A + + +
Sbjct: 194 DRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIR 253
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G ++ ++G DS V LV Y C + A +FD M ER+VVSWN +I V
Sbjct: 254 IGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYV 313
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+N EA+ F KM D G +P + +++ L AC +LG+L G+++H +E N
Sbjct: 314 QNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVS 373
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+ +LI MY KC V A +F +++ + +W+AMILG AQ+G EAL FS M+ +
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQART 433
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
+ P+ T++ V+ A + H + +HG+
Sbjct: 434 VKPDTFTYVSVITAIAELSIT-------HHAKWIHGV 463
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 166/491 (33%), Positives = 256/491 (52%), Gaps = 38/491 (7%)
Query: 56 LQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVW 115
L +D IL L+ F L Y + N V + WN++I + P EA+
Sbjct: 167 LGSDVFILNSLIHFYAKCGELGLGY--RVFVNIPRRDV-VSWNSMITAFVQGGCPEEALE 223
Query: 116 VFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYG 175
+F +M+ + +KP T VL ACA+ S G V + + ++ + + +N ++ Y
Sbjct: 224 LFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYT 283
Query: 176 SCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF--------- 226
C DA ++FD M E+ +VSW ++ + A G F M +
Sbjct: 284 KCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISA 343
Query: 227 -----------------------EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
+PDE T++ LSAC +LG + LG W+H+ + ++G L
Sbjct: 344 YEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKL 403
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
NC L T+LIDMY KCG + A ++F +E +V+ WSAMI GLA HG+ ++A+ LFS M+
Sbjct: 404 NCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQ 463
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+ PN VTF +LCAC+H G+VE+G +F++ME V+G+ P HY M DIL RAG L
Sbjct: 464 EDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLL 523
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
+EA I MP P V ALL A +IH+ + + +L+ELEP V+++
Sbjct: 524 EEAVELIEKMPMAPAASVWGALLGACTIHENVV---LAEQACSQLIELEPGNHGAYVLLS 580
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N YA+ G W++VS +R+ M++VGLKK G S +E+ G +H F G +S IY L+
Sbjct: 581 NIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLD 640
Query: 504 TLNLHMKVLNF 514
+ ++ + +
Sbjct: 641 EIVARLETIGY 651
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 189/371 (50%), Gaps = 18/371 (4%)
Query: 6 VPTTNHIFPPKPSNC--NSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQIL 63
+P ++ + P P++ N+D LS + C K L QIHAQ+ +GL D
Sbjct: 11 LPRSHSLPTPNPNSITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSA 70
Query: 64 KELVRFCTLSSSKNLTYARSILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFID 119
L+ LS +L YA+ + D +P P WN LIR YA S P +++ +F+
Sbjct: 71 SRLITAAALSPFPSLDYAQQVF-----DQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLR 125
Query: 120 MKRRGIK-PTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCR 178
M + P +FT+PF++KA +E+ L G V K L SDV+ N+L+ FY C
Sbjct: 126 MLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCG 185
Query: 179 RKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
+VF ++ R VVSWN +IT V+ EA+ F +M+ +P+ TM+ VLS
Sbjct: 186 ELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLS 245
Query: 239 ACTELGNLSLGKWVHLQLIERGTV-LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVW 297
AC + + G+WVH IER + + L A++DMY KCG+V A+ LF +M E ++
Sbjct: 246 ACAKKSDFEFGRWVH-SYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIV 304
Query: 298 TWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM 357
+W+ M++G A+ G + A +F M N I+ + ++ A G ++ FHE+
Sbjct: 305 SWTTMLVGYAKIGEYDAAQGIFDAMPNQDIA----AWNALISAYEQCGKPKEALELFHEL 360
Query: 358 EHVHGIKPMRI 368
+ KP +
Sbjct: 361 QLSKTAKPDEV 371
>gi|225435652|ref|XP_002283361.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36730
[Vitis vinifera]
Length = 461
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/459 (35%), Positives = 262/459 (57%), Gaps = 15/459 (3%)
Query: 28 ARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
+RQ L+ + HL Q+H+ I + ++ ++ + F SS ++ +AR
Sbjct: 2 SRQIQILLQRSKTTTHLLQLHSLILKTAKDHNPDLISQ---FIFSISSVSIEFAR----- 53
Query: 88 YVNDSVPI-----PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI 142
V D +PI WN++IR Y S P EAV +F M+R G+KP FTYPFV+KAC
Sbjct: 54 LVFDRLPIRAPIFAWNSIIRAYTKSSVPIEAVKLFSQMQRVGLKPDNFTYPFVVKACGRS 113
Query: 143 SGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII 202
+ G + + + K+G DSD Y N L+R Y + A +VF++M R VVSW+ +I
Sbjct: 114 LVVGAGGAMHSIIVKAGFDSDRYVGNTLLRMYANLNAVGLARRVFNEMTVRDVVSWSSMI 173
Query: 203 TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV 262
V +A+ F M +P+ T++ +LSACT L N+ +G+ +H +I
Sbjct: 174 AGYVACNCQADALMVFRHMMLANEKPNSVTLVSLLSACTRLLNIGVGESIHSYIIVNCIG 233
Query: 263 LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM 322
L+ LGTA+++MY+KCG + A +F+ + E N+ +W+ MI GLA H + E+A+ LF+ M
Sbjct: 234 LDVALGTAILEMYSKCGHIEKALKVFNSLTEKNLQSWTIMISGLADHSHGEDAISLFTQM 293
Query: 323 KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGH 382
+ + + P+ ++F +L AC+H G+V++G +F +M ++ I+P HY M D+ ARAG
Sbjct: 294 EQTGLQPDSMSFSEILSACSHLGLVDEGQTFFSQMVKIYNIRPTMEHYGCMVDMFARAGM 353
Query: 383 LKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIV 442
++EAY I NMP +PN ++LR+ + A +D + G +RR LLE+EP N V+
Sbjct: 354 IEEAYEIIKNMPMEPNSVILRSFIGACR-NDGRVF-GFDENLRRLLLEIEPDLGANYVLA 411
Query: 443 ANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGS 481
+ + G W + +++R MK GLKK+ G S VE+ GS
Sbjct: 412 SGVSSLSGCWNEAADLRVSMKEKGLKKVPGWSRVEVSGS 450
>gi|296081956|emb|CBI20961.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 169/484 (34%), Positives = 268/484 (55%), Gaps = 13/484 (2%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+ LK C + L +IHA I L + ++ ++V C T ++L V D
Sbjct: 63 VPILKDCPNIVELKKIHAHIVKFSLSQSSFLVTKMVDVCNHYGE---TEYANLLFKGVAD 119
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDM-----KRRGIKPTEFTYPFVLKACAEISGLN 146
+N +IR Y + A+ V+ M I P +FT+PFV+K+CA + +
Sbjct: 120 PNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYD 179
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER--SVVSWNVIITV 204
G QV +V K G S+ N+LV Y C DA +VF++M ER ++ SW I++
Sbjct: 180 LGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDATIFSWTAIVSG 239
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
+A+ +F +M+ +G EPDE +++ VL C +LG L LGKW+H+ + G + N
Sbjct: 240 YARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRN 299
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+ ALI+MYAKCG++ R LF +M+E +V +WS MI+GLA HG A EA+ELF M+
Sbjct: 300 ICVCNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMIVGLANHGRAREAIELFQEMQK 359
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ I P+ +TF+G+L AC HAG++ +G RYF M+ + I+P HY + ++L +G L
Sbjct: 360 AKIEPSIITFVGLLTACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLD 419
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
+A + MP +P+ + +LLS+ H + E LLELEP + N V+++N
Sbjct: 420 QALELVKKMPRKPDSPIWGSLLSSCRSHGNLKIAVIAME---HLLELEPADTGNYVLLSN 476
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILET 504
YA++G W+ VS +R+ M++ +KK G S +E+ + F SG DS+ I ++L+
Sbjct: 477 LYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIEVDNMVQEFASGDDSKPFSKAICRVLKL 536
Query: 505 LNLH 508
L +H
Sbjct: 537 LVMH 540
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 164/469 (34%), Positives = 252/469 (53%), Gaps = 6/469 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+IH+++ G D + L+ S + AR + V + I W +I G A
Sbjct: 467 EIHSRVVKDGFMFDISVQNALISMYARCGS--IKDARLLFNKMVRKDI-ISWTAMIGGLA 523
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
S EA+ VF DM++ G+KP TY +L AC+ + L+ G ++ V ++GL +D +
Sbjct: 524 KSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAH 583
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N LV Y C +DA +VFD M +R +V++N +I + EA+ F ++++ G
Sbjct: 584 VANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEG 643
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+PD+ T + +L+AC G+L K +H +++ G + + LG AL+ YAKCG+ A
Sbjct: 644 LKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDAL 703
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
L+F +M + NV +W+A+I G AQHG ++ L+LF MK I P+ VTF+ +L AC+HAG
Sbjct: 704 LVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAG 763
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
++E+G RYF M GI P HY M D+L RAG L E I MPFQ N + AL
Sbjct: 764 LLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGAL 823
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
L A IH V L+L+P + V +++ YA GMW+ + +R+ M+
Sbjct: 824 LGACRIHG---NVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQR 880
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
G+ K G SW+E+G +H F + S E IY L+ L MK+ +
Sbjct: 881 GVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGY 929
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 160/303 (52%), Gaps = 5/303 (1%)
Query: 47 IHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+H+ I +G ++D + LV+ + S K+ R + VN + I WN +I G A
Sbjct: 367 VHSHILNAGHESDLAVGTALVKMYAKCGSYKD---CRQVFEKLVNRDL-IAWNTMIGGLA 422
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
EA ++ M+R G+ P + TY +L AC + L+ G ++ + V K G D+
Sbjct: 423 EGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDIS 482
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N L+ Y C +DA +F+ M + ++SW +I ++ EA+ F M+ G
Sbjct: 483 VQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAG 542
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+P+ T +L+AC+ L G+ +H Q+IE G + + L++MY+ CG+V AR
Sbjct: 543 LKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDAR 602
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F RM + ++ ++AMI G A H +EAL+LF ++ + P+ VT++ +L AC ++G
Sbjct: 603 QVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSG 662
Query: 346 MVE 348
+E
Sbjct: 663 SLE 665
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 180/355 (50%), Gaps = 9/355 (2%)
Query: 81 ARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACA 140
AR + SV + W +I GYA A +F M++ G+ P TY VL A +
Sbjct: 298 AREVFDKMETKSV-VSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFS 356
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
+ L G V +++ +G +SD+ LV+ Y C +D +VF+ + R +++WN
Sbjct: 357 GPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNT 416
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
+I E EA + +M+ G P++ T +++L+AC L G+ +H ++++ G
Sbjct: 417 MIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDG 476
Query: 261 TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS 320
+ + + ALI MYA+CG++ ARLLF++M ++ +W+AMI GLA+ G EAL +F
Sbjct: 477 FMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQ 536
Query: 321 NMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARA 380
+M+ + + PN VT+ +L AC+ ++ G R H+ G+ +T+ ++ +
Sbjct: 537 DMQQAGLKPNRVTYTSILNACSSPAALDWG-RRIHQQVIEAGLATDAHVANTLVNMYSMC 595
Query: 381 GHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
G +K+A M Q + + A++ + H+ +G E + L+ G
Sbjct: 596 GSVKDARQVFDRMT-QRDIVAYNAMIGGYAAHN------LGKEALKLFDRLQEEG 643
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 165/347 (47%), Gaps = 33/347 (9%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN ++ GY EA+ + +M++ G+ T +L +C S L G ++
Sbjct: 212 WNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAM 271
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
K+ L DV N ++ Y C +A +VFD M +SVVSW +II + A
Sbjct: 272 KARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFE 331
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F KM+ G P+ T + VL+A + L GK VH ++ G + +GTAL+ MYA
Sbjct: 332 IFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYA 391
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KCG+ R +F ++ ++ W+ MI GLA+ G EEA E++ M+ + PN +T++
Sbjct: 392 KCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVI 451
Query: 337 VLCACN-----------HAGMVEDGYRYFHEMEHV--------HGIKPMRIHYHTMA--D 375
+L AC H+ +V+DG+ + +++ IK R+ ++ M D
Sbjct: 452 LLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKD 511
Query: 376 I---------LARAGHLKEAYTFIMNMP---FQPNPIVLRALLSASS 410
I LA++G EA +M +PN + ++L+A S
Sbjct: 512 IISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACS 558
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 121/223 (54%), Gaps = 2/223 (0%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
++++G + Y +LK C E+ L G +V ++ + D YT N L+ Y C
Sbjct: 132 LQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGS 191
Query: 180 KRDACKVFDDM--CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVL 237
+A +V++ + ER+V SWN ++ V+ ++ EA+ +M+ G T + +L
Sbjct: 192 IEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLL 251
Query: 238 SACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVW 297
S+C L G+ +H++ ++ + + + +++MYAKCG++ AR +F +ME +V
Sbjct: 252 SSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVV 311
Query: 298 TWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
+W+ +I G A G++E A E+F M+ + PN +T++ VL A
Sbjct: 312 SWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNA 354
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 176/499 (35%), Positives = 262/499 (52%), Gaps = 20/499 (4%)
Query: 16 KPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSS 75
KP++ S L+S C L L K QIH SG+++D ++ LV +
Sbjct: 218 KPNS--STLVSVMPVCAHLLALEQGK----QIHCYAIRSGIESDVLVVNGLVNM--YAKC 269
Query: 76 KNLTYARSILCNYVNDSVPI----PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFT 131
N+ A + + +PI WN +I GY+ + + EA+ F M+ RGIKP T
Sbjct: 270 GNVNTAHKLF-----ERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSIT 324
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
VL ACA + L +G Q+ +SG +S+ N LV Y C A K+F+ M
Sbjct: 325 MVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMP 384
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
+++VV+WN II+ ++ EA+ F++M+ G +PD ++ VL AC L GK
Sbjct: 385 KKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQ 444
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+H I G N +GT L+D+YAKCG V A+ LF RM E +V +W+ MIL HG+
Sbjct: 445 IHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGH 504
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
E+AL LFS M+ + +++ F +L AC+HAG+V+ G +YF M+ +G+ P HY
Sbjct: 505 GEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYA 564
Query: 372 TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLEL 431
+ D+L RAGHL EA I NM +P+ V ALL A IH +G + + L EL
Sbjct: 565 CLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIH---CNIELGEQAAKHLFEL 621
Query: 432 EPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDS 491
+P + V+++N YAE WE V+ +R+ MK G+KK G S V + + F G +
Sbjct: 622 DPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRT 681
Query: 492 QVELAGIYQILETLNLHMK 510
+ IY +LE L M+
Sbjct: 682 HPQSEQIYAMLEILYEQMR 700
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 129/372 (34%), Positives = 184/372 (49%), Gaps = 15/372 (4%)
Query: 32 LSFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
LS +K C S+ L ++H I G ++D + L T S L AR +
Sbjct: 124 LSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGS--LENARQVF--- 178
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
D +P + WN +I GY+ + +P EA+ +F +M+ GIKP T V+ CA +
Sbjct: 179 --DRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLA 236
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L +G Q+ +SG++SDV N LV Y C A K+F+ M R V SWN II
Sbjct: 237 LEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGG 296
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
N EA+ +F +M+ G +P+ TM+ VL AC L L G+ +H I G N
Sbjct: 297 YSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESN 356
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+G AL++MYAKCG V A LF RM + NV W+A+I G +QHG+ EAL LF M+
Sbjct: 357 DVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQA 416
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
I P+ + VL AC H +E G + H G + + + DI A+ G++
Sbjct: 417 QGIKPDSFAIVSVLPACAHFLALEQG-KQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVN 475
Query: 385 EAYTFIMNMPFQ 396
A MP Q
Sbjct: 476 TAQKLFERMPEQ 487
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 168/341 (49%), Gaps = 8/341 (2%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W I GY + +A+ ++ M+R GI P + + V+KAC S L G +V +
Sbjct: 86 VVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHED 145
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ G +SDV L Y C +A +VFD M +R VVSWN II +N EA
Sbjct: 146 IIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEA 205
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M+ G +P+ +T++ V+ C L L GK +H I G + + L++M
Sbjct: 206 LALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNM 265
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG V A LF RM +V +W+A+I G + + EAL F+ M+ I PN +T
Sbjct: 266 YAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITM 325
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ VL AC H +E G + H G + + + + ++ A+ G++ AY MP
Sbjct: 326 VSVLPACAHLFALEQG-QQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMP 384
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
+ N + A++S S H G +E +E++ +G
Sbjct: 385 -KKNVVAWNAIISGYSQH------GHPHEALALFIEMQAQG 418
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 108/203 (53%), Gaps = 1/203 (0%)
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
+ V W I V+N + +A+ + +M+ G PD+ L V+ AC +L G+ VH
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
+I RG + +GTAL MY KCG++ AR +F RM + +V +W+A+I G +Q+G
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPY 203
Query: 314 EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
EAL LFS M+ + I PN T + V+ C H +E G + H GI+ + + +
Sbjct: 204 EALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQG-KQIHCYAIRSGIESDVLVVNGL 262
Query: 374 ADILARAGHLKEAYTFIMNMPFQ 396
++ A+ G++ A+ MP +
Sbjct: 263 VNMYAKCGNVNTAHKLFERMPIR 285
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 170/477 (35%), Positives = 246/477 (51%), Gaps = 9/477 (1%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S L+ C S L QIH Q+ SG Q + + L+ + L AR IL
Sbjct: 420 SILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDM--YAKHGELDTARGILQRLR 477
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+ V + W +I GY D EA+ +F +M+ +GI+ + + ACA I LN+G
Sbjct: 478 EEDV-VSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQ 536
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ A SG D+ N LV Y C R +DA F+ + + +SWN +I+ ++
Sbjct: 537 QIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSG 596
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
EA+ F +M G E + T +SA N+ GK +H +I+ G +
Sbjct: 597 HCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASN 656
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
LI +Y+KCG++ A+ F M E NV +W+AMI G +QHGY EA+ LF MK + P
Sbjct: 657 VLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMP 716
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
N+VTF+GVL AC+H G+V +G YF M HG+ P HY + D+L RA L A F
Sbjct: 717 NHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREF 776
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
I MP +P+ ++ R LLSA ++H +G R LLELEP S V+++N YA
Sbjct: 777 IEEMPIEPDAMIWRTLLSACTVHK---NIEIGEFAARHLLELEPEDSATYVLLSNMYAVS 833
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
G W+ R+ MK+ G+KK G SW+E+ SIH F+ G IY+ ++ LN
Sbjct: 834 GKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLN 890
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 177/380 (46%), Gaps = 15/380 (3%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN ++ Y E+ W+F+ M+ G+ P ++TYP +L+ C + L+ G Q+
Sbjct: 381 VLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQ 440
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V KSG +VY + L+ Y A + + E VVSW +I ++ EA
Sbjct: 441 VIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEA 500
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M++ G D +SAC + L+ G+ +H Q G + +G AL+ +
Sbjct: 501 LKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSL 560
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YA+CG A L F +++ + +W+A+I G AQ G+ EEAL++FS M + + N TF
Sbjct: 561 YARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTF 620
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ A + ++ G + H M G + + + ++ G +++A MP
Sbjct: 621 GSAVSATANTANIKQG-KQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMP 679
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
+ N + A+++ S H G G+E E++ G ++ N VG+
Sbjct: 680 -EKNVVSWNAMITGYSQH------GYGSEAVSLFEEMKQLG-----LMPNHVTFVGVLSA 727
Query: 455 VSNVRRFMKNVGLKKMKGMS 474
S+V + N GL + MS
Sbjct: 728 CSHVG--LVNEGLSYFRSMS 745
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 176/374 (47%), Gaps = 9/374 (2%)
Query: 39 CSKKHLY----QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP 94
C+K L+ Q+H I GL ++ + LV S NL A I ++
Sbjct: 223 CTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTL--YSRWGNLIAAEQIFSK-MHRRDR 279
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I +N+LI G A A+ +F M+ +KP T +L ACA + +G Q+ +
Sbjct: 280 ISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSY 339
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V K G+ SD+ +L+ Y C A + F +VV WNV++ + L E+
Sbjct: 340 VIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSES 399
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
F++M+ G P++ T +L CT LG L LG+ +H Q+I+ G N + + LIDM
Sbjct: 400 YWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDM 459
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAK G + AR + R+ E +V +W+AMI G QH EAL+LF M+N I + + F
Sbjct: 460 YAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGF 519
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ AC + G + H ++ G + + + AR G ++AY +
Sbjct: 520 SSAISACAGIQALNQG-QQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKID 578
Query: 395 FQPNPIVLRALLSA 408
+ N I AL+S
Sbjct: 579 AKDN-ISWNALISG 591
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 177/390 (45%), Gaps = 19/390 (4%)
Query: 33 SFLKLCCSKKHLYQ----IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN- 87
S L+ C K +Q IHA+I G + + L+ S + ++ A+ +
Sbjct: 116 SVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDL--YSKNGHVDLAKLVFERL 173
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
++ DSV W +I G + + R EA+ +F M + + PT + + VL AC +I
Sbjct: 174 FLKDSVS--WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKL 231
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G Q+ + K GL S+ + N LV Y A ++F M R +S+N +I+ +
Sbjct: 232 GEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQ 291
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
+ A+ F KM+ +PD T+ +LSAC +G GK +H +I+ G + +
Sbjct: 292 RGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLII 351
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
+L+D+Y KC + A F E NV W+ M++ Q G E+ +F M+ +
Sbjct: 352 EGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGL 411
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKP-MRIHYH---TMADILARAGHL 383
PN T+ +L C G ++ G E H IK + + + + D+ A+ G L
Sbjct: 412 MPNQYTYPSILRTCTSLGALDLG-----EQIHTQVIKSGFQFNVYVCSVLIDMYAKHGEL 466
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHD 413
A + + + + + A+++ + HD
Sbjct: 467 DTARGILQRLR-EEDVVSWTAMIAGYTQHD 495
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 120/245 (48%), Gaps = 8/245 (3%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M+ RGI+ TY ++ + C L + ++ A + KSG D + + L+ Y +
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
+A K+FDD+ +V WN +I+ + + +G F M PDE+T VL A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 240 CT-ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
C+ + + +H ++I G + + LID+Y+K G V A+L+F R+ + +
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
W AMI GL+Q+G +EA+ LF M S++ P F VL AC + + G E
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLG-------E 233
Query: 359 HVHGI 363
+HG
Sbjct: 234 QLHGF 238
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 123/267 (46%), Gaps = 8/267 (2%)
Query: 91 DSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG-L 145
D +P WN +I G + + +F M + P E T+ VL+AC+
Sbjct: 69 DDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPF 128
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
Q+ A + G S N L+ Y A VF+ + + VSW +I+
Sbjct: 129 QVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGL 188
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
+N EA+ F +M P VLSACT++ LG+ +H +++ G
Sbjct: 189 SQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSET 248
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
+ AL+ +Y++ G + A +FS+M + +++++I GLAQ G+++ AL+LF M+
Sbjct: 249 FVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLD 308
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYR 352
+ P+ VT +L AC G GY+
Sbjct: 309 CMKPDCVTVASLLSACASVGA---GYK 332
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 170/500 (34%), Positives = 260/500 (52%), Gaps = 37/500 (7%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
++H I G ++ + L+ +LS ++ AR + V + WN +I GY
Sbjct: 140 ELHDHIVKLGFSSNVFVQNALIHLYSLSG--EVSVARGVFDRSSKGDV-VTWNVMISGYN 196
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
S + E++ +F +M+R + P+ T VL AC+++ LN G +V V ++
Sbjct: 197 RSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRV 256
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N L+ Y +C A +FD+M R V+SW I+T +G A YF KM +
Sbjct: 257 LENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERD 316
Query: 226 F-------------------------------EPDETTMLVVLSACTELGNLSLGKWVHL 254
F +PDE TM+ +L+AC LG L LG+W+
Sbjct: 317 FVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKA 376
Query: 255 QLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEE 314
+ + ++ +G ALIDMY CG V A +F+ M + +W+A+I GLA +GY EE
Sbjct: 377 YIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEE 436
Query: 315 ALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMA 374
AL++FS M +SI+P+ VT +GVLCAC H+GMV+ G ++F M HGI+P HY M
Sbjct: 437 ALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMV 496
Query: 375 DILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPR 434
D+L RAGHLKEA+ I NMP +PN IV +LL A +H + + +++LELEP
Sbjct: 497 DLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVH---RDEEMAEMAAQQILELEPE 553
Query: 435 GSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVE 494
V++ N YA WEK+ VR+ M + G+KK G S +E+ GS+H F +G +
Sbjct: 554 NGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQ 613
Query: 495 LAGIYQILETLNLHMKVLNF 514
IY L+ +++ +K +
Sbjct: 614 SKEIYSKLDEMSVDLKFAGY 633
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 175/354 (49%), Gaps = 40/354 (11%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LS +K C S L QIH+Q +GL ++ + +++ FC ++ YAR + D
Sbjct: 23 LSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVF-----D 77
Query: 92 SVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
++P P WNN+I+GY+ P AV ++ +M RG+ P E+TYPF+LK + +
Sbjct: 78 TMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKC 137
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G ++ ++ K G S+V+ N L+ Y A VFD + VV+WNV+I+
Sbjct: 138 GRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNR 197
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
+ E++ F +M+ + P T++ VLSAC++L +L++GK VH + + L
Sbjct: 198 SKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVL 257
Query: 268 GTALIDMYAKC-------------------------------GAVGCARLLFSRMEEINV 296
ALIDMYA C G VG AR F +M E +
Sbjct: 258 ENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDF 317
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
+W+AMI G Q +E L LF M+ ++I P+ T + +L AC H G +E G
Sbjct: 318 VSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELG 371
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 168/507 (33%), Positives = 261/507 (51%), Gaps = 37/507 (7%)
Query: 42 KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
K + H Q+ ++GL + L+ ++ F L S ++ YA +L +N I
Sbjct: 2 KQFKEAHTQLIINGLTHPPPSLRPIISFSALDPSGDIDYALLLLLRTSTPPTVFLFNTTI 61
Query: 102 RGYAWSDRPRE---AVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
RG++ + RP +V +F+ M + P FT+ F+ + C+ + G Q V K+
Sbjct: 62 RGFSRARRPGSLLSSVLLFVRMGVLSLAPNNFTFTFLFQGCSNCVAFDLGRQFHGMVIKN 121
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
+ DV+ N+++RFY C R DA VFD+ E VVSWN +I C+ N + EA+ F
Sbjct: 122 SFEMDVFVRNSIIRFYSVCGRLNDARWVFDESSELDVVSWNSMIDGCIRNGNILEALSLF 181
Query: 219 VKMKD-------------------------------LGFEPDETTMLVVLSACTELGNLS 247
KM + L EP+ ++ VLSAC++LG L
Sbjct: 182 SKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVSVLSACSQLGALD 241
Query: 248 LGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA 307
G WVH + ++ ++ L ALIDMYAKCG++ A FS + +V ++A I GLA
Sbjct: 242 HGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRDVSAYTAAISGLA 301
Query: 308 QHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
+G +EEAL+LF MK ISP+ V+++ VLCAC+HAG VE G+ YF M VHGI+P
Sbjct: 302 MNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWVEKGFHYFASMSDVHGIRPEL 361
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRR 427
HY M D+L RAG L+EA F+ +MP +P+ ++ ALL A ++ +G V
Sbjct: 362 DHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALLGACRVYG---NAEMGQRVGSL 418
Query: 428 LLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYS 487
L+E + ++++N YAE E VR+ M+ + ++ G S +E+ G +H F+S
Sbjct: 419 LVESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMRRRKVDRVPGCSLIEVAGFVHEFFS 478
Query: 488 GYDSQVELAGIYQILETLNLHMKVLNF 514
G S + IY + E + +K +
Sbjct: 479 GDRSHEKTEEIYLMWEEIVKEIKKFGY 505
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 173/507 (34%), Positives = 263/507 (51%), Gaps = 45/507 (8%)
Query: 29 RQCLSFLKLCCSKKHLYQIHAQIQVSG-LQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
Q + L+ C + K L QIH Q+ G ++N + LV + + NL Y R +
Sbjct: 11 EQTQALLERCSNMKELMQIHGQLLKKGTIRNQLTVSTLLVSYARIELV-NLAYTRVVF-- 67
Query: 88 YVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS 143
DS+ P WN ++R Y+ S+ P A+ ++ M + +T+PF+LKAC+ +S
Sbjct: 68 ---DSISSPNTVIWNTMLRAYSNSNDPEAALLLYHQMLHNSVPHNSYTFPFLLKACSALS 124
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII- 202
E Q+ A++ K G +VY N+L+R Y + A +F+ + R +VSWN++I
Sbjct: 125 AFEETQQIHAHIIKRGFGLEVYATNSLLRVYAISGNIQSAHVLFNQLPTRDIVSWNIMID 184
Query: 203 ---------------------------TVCVENLWLG---EAVGYFVKMKDLGFEPDETT 232
T+ V + +G EA+ +M G +PD T
Sbjct: 185 GYIKFGNLDMAYKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQMLVAGIKPDSIT 244
Query: 233 MLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME 292
+ LSAC LG L GKW+H + + ++ LG L DMY KCG + A L+FS++E
Sbjct: 245 LSCSLSACAGLGALEQGKWIHTYIEKNEIKIDPVLGCVLTDMYVKCGEMEKALLVFSKLE 304
Query: 293 EINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR 352
+ V W+A+I GLA HG EAL+ F+ M+ + I+PN +TF +L AC+HAG+ E+G
Sbjct: 305 KKCVCAWTAIIGGLAIHGKGREALDWFTQMQKAGINPNSITFTAILTACSHAGLTEEGKS 364
Query: 353 YFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
F M V+ IKP HY M D++ RAG LKEA FI +MP +PN + ALL+A +H
Sbjct: 365 LFESMSSVYNIKPSMEHYGCMVDLMGRAGLLKEAREFIESMPVKPNAAIWGALLNACQLH 424
Query: 413 DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKG 472
+G E+ + L+EL+P S + +A+ YA G W +V VR +K+ GL G
Sbjct: 425 K---HFELGKEIGKILIELDPDHSGRYIHLASIYAAAGEWNQVVRVRSQIKHRGLLNHPG 481
Query: 473 MSWVELGGSIHRFYSGYDSQVELAGIY 499
S + L G +H F++G S + IY
Sbjct: 482 CSSITLNGVVHEFFAGDGSHPHIQEIY 508
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 177/468 (37%), Positives = 253/468 (54%), Gaps = 16/468 (3%)
Query: 44 LYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP----WNN 99
L+Q+HA I VSG +L +L+ + S ++Y R I +VP P + +
Sbjct: 28 LHQVHAHIIVSGYGRSRSLLTKLLNLACAAGS--ISYTRQIFL-----AVPNPDSFLFTS 80
Query: 100 LIRGYAWS-DRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
LI+ + S + +++ + M + P+ +T+ V+K+CA++S L G V +V
Sbjct: 81 LIKSTSKSHNFSIYSLYFYSRMVLSNVSPSNYTFTSVIKSCADLSALKHGRVVHGHVLVH 140
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
G DVY LV YG C +A KVFD + ERS+V+WN +I+ +N + EA+G F
Sbjct: 141 GFGLDVYVQAALVALYGKCGDLINARKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLF 200
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
+MK+ G EPD T + VLSAC LG SLG WVH ++ G LN LGT+LI+MY +C
Sbjct: 201 DRMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRC 260
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
G V AR +F M+E NV W+AMI G +GY +A+ELF M+ + + PN +TF+ VL
Sbjct: 261 GNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVL 320
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM-NMPFQP 397
AC HAG+V +G R F + + + P H + D+L RAG L EAY FI +P P
Sbjct: 321 SACAHAGLVNEGRRLFASIREEYHLVPGVEHNVCLVDMLGRAGLLDEAYNFIKEEIPENP 380
Query: 398 NPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSN 457
P +L A+L A +H +G +V LL EP + VI++N YA G ++V
Sbjct: 381 APAILTAMLGACKMHK---NFDLGAQVAEHLLAAEPENPAHYVILSNIYALAGRMDQVEI 437
Query: 458 VRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
VR M LKK G S VE+ + F G S E IY L+ L
Sbjct: 438 VRNNMIRKCLKKQVGYSTVEVDQKTYLFSMGDKSHSETNAIYHYLDEL 485
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 182/531 (34%), Positives = 267/531 (50%), Gaps = 29/531 (5%)
Query: 1 MVRFPVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSG--LQN 58
M P+ T P S L++L C S + L Q+HA +G LQ
Sbjct: 1 MSSSPLTATPSPLLPAKSKNPPPHHHHHNPLLAYLPHCTSLRALAQLHAVAVKAGGGLQA 60
Query: 59 DAQILKELVRFCTLSSSK---NLTYARSILCNYVNDSVPIP-----WNNLIRGYAWSDR- 109
+ L+ CT ++ +L YAR + D +P P +N L+RGYA
Sbjct: 61 HPAFVTRLLTLCTEQGAEAPAHLAYARQVF-----DRIPHPGDVVWYNTLLRGYARGGWG 115
Query: 110 ---PREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
EA VF+ M G+ P +T+ +LKACA EG Q K+G Y
Sbjct: 116 GGCAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYV 175
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
L+ Y C R A +FD M VVS+N +IT V + GEA+ F +M+ G
Sbjct: 176 APTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGL 235
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
+P T++ VLSAC LG L LG+W+H + + ++ TALIDMYAKCG++ A
Sbjct: 236 KPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIG 295
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
+F ME + WS M++ A HGY EA+ +F MK + P+ VTFLGVL AC+H+GM
Sbjct: 296 VFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGM 355
Query: 347 VEDGYRYFHEMEH---VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
V +G +YF M V GIK HY + D+LAR+G L+ AY FI +P +P I+ R
Sbjct: 356 VSEGLQYFDSMREYGIVSGIK----HYGCVTDLLARSGQLERAYKFIDELPIKPTAILWR 411
Query: 404 ALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMK 463
LLSA + H +G V R+LEL+ + VI +N A G WE+++ VR+ M
Sbjct: 412 TLLSACAGHG---DVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMS 468
Query: 464 NVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
G+ K+ G S +E+ +H F++G S ++++ + +K++ +
Sbjct: 469 EKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGY 519
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 165/463 (35%), Positives = 250/463 (53%), Gaps = 13/463 (2%)
Query: 57 QNDAQILK--------ELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSD 108
Q AQ+LK LV C LS ++ YA SI ++ +N +IRGY
Sbjct: 6 QVHAQVLKWENSFCASNLVATCALSDWGSMDYACSIF-RQIDQPGTFEFNTMIRGYVNVM 64
Query: 109 RPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNN 168
A++++ +M RG++ FTYP + KACA + + EGMQ+ + K GL+ D++ N
Sbjct: 65 NMENALFLYYEMLERGVESDNFTYPALFKACASLRSIEEGMQIHGYIFKRGLEGDLFVQN 124
Query: 169 NLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF-E 227
+L+ YG C + +C VF+ M R V SW+ II E + F +M G
Sbjct: 125 SLINMYGKCGKIELSCSVFEHMDRRDVASWSAIIAAHASLGMWSECLSVFGEMSREGSCR 184
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
P+E+ ++ VLSACT LG L LG+ H+ L+ +N + T+LIDMY KCG + L
Sbjct: 185 PEESILVSVLSACTHLGALDLGRCTHVTLLRNIREMNVIVQTSLIDMYVKCGCIEKGLSL 244
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMV 347
F RM + N ++S MI GLA HG EAL++FS+M + P+ V +LGVL ACNHAG+V
Sbjct: 245 FQRMVKKNQLSYSVMITGLAMHGRGMEALQVFSDMLEEGLKPDDVVYLGVLSACNHAGLV 304
Query: 348 EDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLS 407
++G + F+ M+ HGI+P HY + ++ RAG L +A I +MP +PN +V R LLS
Sbjct: 305 DEGLQCFNRMKLEHGIEPTIQHYGCIVHLMGRAGMLNKALEHIRSMPIKPNEVVWRGLLS 364
Query: 408 ASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGL 467
A H + +G + L EL + V+++N YA WE V+ +R M G
Sbjct: 365 ACKFH---HNLEIGEIAAKSLGELNSSNPGDYVVLSNMYARAKRWEDVAKIRTEMARKGF 421
Query: 468 KKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+ G S V++ I++F S S + G+Y+++ + +K
Sbjct: 422 TQTPGFSLVQVERKIYKFVSQDMSHPQCKGMYEMIHQMEWQLK 464
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 174/512 (33%), Positives = 266/512 (51%), Gaps = 39/512 (7%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LS LK C + KHL+Q H + GL D +L + C SS Y+ SI +
Sbjct: 45 LSLLKQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEAC--SSLGFSHYSHSIFTHKTRP 102
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
+ + +N +I+ + + EA+ ++ + ++ ++ PFVLKA + ++ G Q+
Sbjct: 103 DIYL-YNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQI 161
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC-------------------- 191
+GL SD++ L++ Y SC +A ++FD +C
Sbjct: 162 HCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDV 221
Query: 192 -----------ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
ER+V+SW +I + EA+ F +M+ EPDE ML LSAC
Sbjct: 222 DNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSAC 281
Query: 241 TELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
LG L LG+W+H + + G L ALIDMYAKCG + A +F ME +V TW+
Sbjct: 282 AHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWT 341
Query: 301 AMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHV 360
+MI GLA HG EALE+FS M+ + I PN +TF+ +L AC H G+VE G YF M
Sbjct: 342 SMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTK 401
Query: 361 HGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH-DAKYQDG 419
+GIKP HY M D+L RAG L+EA + MPF+ N + +LL+A+ IH DA+
Sbjct: 402 YGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAE---- 457
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
+G + + L+++EP S N +++N YA W + VR+ M++ G+KKM G S +E+
Sbjct: 458 LGKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCIEVN 517
Query: 480 GSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
+H F +G + I+++L JNL K+
Sbjct: 518 NRVHEFVAGDKLHPQSERIFEVLCKJNLQSKI 549
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 294 bits (752), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 171/483 (35%), Positives = 262/483 (54%), Gaps = 21/483 (4%)
Query: 33 SFLKLCCS---KKHLYQIHAQIQVSGLQNDAQI---LKELVRFCTLSSSKNLTYARSILC 86
S LK C K+ Q+H+ + +++D + L ++ C L + +
Sbjct: 364 SALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAF------ 417
Query: 87 NYVNDSVPIPWNNLIRGYA--WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
N + + I WN +I GY+ W D EA+ +F++M + GI + T +LK+ A +
Sbjct: 418 NLLPEKDLIAWNAIISGYSQYWEDM--EALSLFVEMHKEGIGFNQTTLSTILKSTAGLQV 475
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
++ QV KSG SD+Y N+L+ YG C DA ++F++ +VS+ +IT
Sbjct: 476 VHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITA 535
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
+ EA+ F++M+D+ +PD +L+AC L GK +H+ +++ G VL+
Sbjct: 536 YAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLD 595
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
G +L++MYAKCG++ A FS + E + +WSAMI GLAQHG+ +AL+LF+ M
Sbjct: 596 IFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLK 655
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+SPN++T + VL ACNHAG+V + YF ME + G KPM+ HY M D+L RAG +
Sbjct: 656 EGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKIN 715
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
EA + MPF+ N V ALL A+ IH D + +G L LEP S V++A
Sbjct: 716 EAVELVNKMPFEANASVWGALLGAARIHKDVE----LGRRAAEMLFILEPEKSGTHVLLA 771
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N YA G WE V+ VRR M++ +KK GMSW+E+ ++ F G S IY L+
Sbjct: 772 NIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLD 831
Query: 504 TLN 506
L+
Sbjct: 832 ELS 834
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/325 (37%), Positives = 177/325 (54%), Gaps = 7/325 (2%)
Query: 34 FLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
L CC+ K L QIHA I SGL +D I L+ S +N YAR L + +
Sbjct: 62 LLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINL--YSKCRNFGYARK-LVDESS 118
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
+ + W+ LI GYA + A+ F +M G+K EFT+ VLKAC+ + L G Q
Sbjct: 119 EPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQ 178
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
V V SG + DV+ N LV Y C D+ ++FD++ ER+VVSWN + + V+ +
Sbjct: 179 VHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDF 238
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
GEAVG F +M G +P+E ++ +++ACT L + S GK +H LI+ G + A
Sbjct: 239 CGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANA 298
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
L+DMYAK G + A +F ++++ ++ +W+A+I G H + E+ALEL MK S I PN
Sbjct: 299 LVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPN 358
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFH 355
T L AC G+ E G R H
Sbjct: 359 IFTLSSALKACAGMGLKELG-RQLH 382
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 185/417 (44%), Gaps = 42/417 (10%)
Query: 33 SFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARS---ILC 86
S LK C K L Q+H + VSG + D + LV + YA+ +
Sbjct: 162 SVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLV----------VMYAKCDEFLDS 211
Query: 87 NYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI 142
+ D +P + WN L Y D EAV +F +M GIKP EF+ ++ AC +
Sbjct: 212 KRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGL 271
Query: 143 SGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII 202
+ G + + K G D D ++ N LV Y DA VF+ + + +VSWN +I
Sbjct: 272 RDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVI 331
Query: 203 TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV 262
CV + +A+ +MK G P+ T+ L AC +G LG+ +H L++
Sbjct: 332 AGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDME 391
Query: 263 LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM 322
+ + L+DMY+KC + AR+ F+ + E ++ W+A+I G +Q+ EAL LF M
Sbjct: 392 SDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEM 451
Query: 323 KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH-------TMAD 375
I N T +L + G + H VHG+ ++ +H ++ D
Sbjct: 452 HKEGIGFNQTTLSTILKSTA-------GLQVVHVCRQVHGLS-VKSGFHSDIYVVNSLID 503
Query: 376 ILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELE 432
+ H+++A + L+S +S+ A Q G G E + LE++
Sbjct: 504 SYGKCSHVEDAERIF-------EECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQ 553
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 151/317 (47%), Gaps = 18/317 (5%)
Query: 108 DRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTN 167
D A+ ID + PT +Y +L C L G+Q+ A++TKSGL D
Sbjct: 37 DPQTTAILNLID--KGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIR 94
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
N+L+ Y CR A K+ D+ E +VSW+ +I+ +N G A+ F +M LG +
Sbjct: 95 NHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVK 154
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
+E T VL AC+ + +L +GK VH ++ G + + L+ MYAKC ++ L
Sbjct: 155 CNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRL 214
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMV 347
F + E NV +W+A+ Q + EA+ LF M S I PN + ++ AC
Sbjct: 215 FDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACT----- 269
Query: 348 EDGYRYFHEMEHVHGIKPMRIHY-------HTMADILARAGHLKEAYTFIMNMPFQPNPI 400
G R + +HG +++ Y + + D+ A+ G L +A + + QP+ +
Sbjct: 270 --GLRDSSRGKIIHGY-LIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIK-QPDIV 325
Query: 401 VLRALLSASSIHDAKYQ 417
A+++ +H+ Q
Sbjct: 326 SWNAVIAGCVLHEHHEQ 342
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 294 bits (752), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 187/540 (34%), Positives = 280/540 (51%), Gaps = 55/540 (10%)
Query: 26 SKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSS--SKNLTYARS 83
S A + C + + L QIHA SG D E++RFC S ++L YA
Sbjct: 14 SPASSLFPQINTCRTIRDLSQIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRDLDYAHK 73
Query: 84 ILCNYVNDSVPIPWNNLIRGYAWSDRPRE--AVWVFIDM-KRRGIKPTEFTYPFVLKACA 140
I N + WN +IRG++ SD + A+ +F +M I+P FT+P VLKACA
Sbjct: 74 IF-NQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACA 132
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSC----------------------- 177
+ + +G Q+ K G D + +NLVR Y C
Sbjct: 133 KTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMI 192
Query: 178 -RRKRDA-----------------CK----VFDDMCERSVVSWNVIITVCVENLWLGEAV 215
RRKRD CK +FD M +RSVVSWN +I+ +N + +AV
Sbjct: 193 DRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAV 252
Query: 216 GYFVKMKD-LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
F +MK P+ T++ VL A + LG+L LG+W+HL + G ++ LG+ALIDM
Sbjct: 253 EVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDM 312
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG + A ++F R+ NV TWSAMI G A HG A +A++ F M+ + + P+ V +
Sbjct: 313 YSKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAY 372
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ +L AC+HAG+VE+G RYF +M V G++P HY M D+L R G L EA FI+NMP
Sbjct: 373 INLLTACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMP 432
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
+P+ ++ +ALL A +H +G V L+++ P S V ++N YA G W +
Sbjct: 433 IKPDDVIWKALLGACRMH---RNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSE 489
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
VS +R MK + ++K G SW+++ G +H F DS I +L ++ +++ +
Sbjct: 490 VSEMRLRMKEMDIRKDPGCSWIDIDGVLHEFLVEDDSHPRAKEINSMLVEISDKLRLAGY 549
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 145/342 (42%), Gaps = 59/342 (17%)
Query: 124 GIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCR-RKRD 182
G P +P + C I L+ Q+ A KSG D ++RF + RD
Sbjct: 12 GNSPASSLFPQI-NTCRTIRDLS---QIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRD 67
Query: 183 ---ACKVFDDMCERSVVSWNVII---TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVV 236
A K+F+ M +R+ SWN II + E+ L + M D EP+ T V
Sbjct: 68 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSV 127
Query: 237 LSACTELGNLSLGKWVH------------------------------------LQLIERG 260
L AC + G + GK +H +IER
Sbjct: 128 LKACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIERE 187
Query: 261 TVL---------NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
V+ L +ID Y + G AR+LF +M + +V +W+ MI G +Q+G+
Sbjct: 188 MVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGF 247
Query: 312 AEEALELFSNMKN-SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
++A+E+F MK I PNYVT + VL A + G +E G + H GI+ +
Sbjct: 248 FKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELG-EWLHLYAEDSGIRIDDVLG 306
Query: 371 HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
+ D+ ++ G +++A +P + N I A+++ +IH
Sbjct: 307 SALIDMYSKCGIIEKAIMVFERLP-RENVITWSAMINGFAIH 347
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 178/484 (36%), Positives = 270/484 (55%), Gaps = 16/484 (3%)
Query: 29 RQCLSFLKL---CCSKKHLYQIHAQ-IQVSGLQNDAQILKELVRFCTLS---SSKNLTYA 81
R C++ L+L S QIHA+ ++ +G+ +L + + F S L YA
Sbjct: 16 RHCVALLRLHLPSPSVAAAKQIHARALRAAGVPLSHPLLAKHLLFHLASLRAGPPPLLYA 75
Query: 82 RSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAE 141
++L + D P N ++R A S PR A+ + +RR P TYP +L+AC
Sbjct: 76 VTVLSCLLPDPDPFSLNTVLRIAASSAHPRIALALH---RRRLAPPDTHTYPPLLQACTR 132
Query: 142 ISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM--CERSVVSWN 199
+ L EG + A K+GL + V+ N+LV YG+C A +VFD++ ER++VSWN
Sbjct: 133 LLALREGESLHAEAAKNGLVALVFVKNSLVHHYGACGLFESAHRVFDEIPVLERNLVSWN 192
Query: 200 VIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER 259
++ N E + F + + PD T++ VL+AC E+G L+LG+ VH+ +
Sbjct: 193 SVMNGFAANGRPNEVLTIFRETLEADLMPDGFTIVSVLTACAEIGALTLGRRVHVFASKV 252
Query: 260 GTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI-NVWTWSAMILGLAQHGYAEEALEL 318
G V N +G ALID+YAKCG V A +F M V +W+++I+GLA +G+ ++ALEL
Sbjct: 253 GLVGNSHVGNALIDLYAKCGGVEDAWKVFEEMGVARTVVSWTSLIVGLAGNGFGKDALEL 312
Query: 319 FSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILA 378
F M+ + P +T +GVL AC+H G+V+DG+RYF+EM+ +GI P H M D+L
Sbjct: 313 FGLMERERLIPTDITMVGVLYACSHCGLVDDGFRYFNEMQDKYGIAPGIEHLGCMVDLLG 372
Query: 379 RAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQN 438
RAG ++EA+ +I MP +PN +V R LL A ++H + +G RL+EL+P S +
Sbjct: 373 RAGRVEEAHNYITTMPVEPNAVVWRTLLGACAMHK---KLELGEAAWARLVELDPGHSGD 429
Query: 439 LVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGI 498
V+++N YA VG W +R+ M G++K G S VEL S++ F G S E I
Sbjct: 430 YVLLSNLYAAVGRWADAHVLRKTMATHGVRKNPGHSLVELRNSVYEFVMGDRSHPESDQI 489
Query: 499 YQIL 502
YQ L
Sbjct: 490 YQTL 493
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 166/467 (35%), Positives = 256/467 (54%), Gaps = 18/467 (3%)
Query: 46 QIHAQIQVSGLQNDAQI---LKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIR 102
Q+H+ + +++D + L ++ C L + + N + + I WN +I
Sbjct: 353 QLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAF------NLLPEKDLIAWNAIIS 406
Query: 103 GYA--WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGL 160
GY+ W D EA+ +F++M + GI + T +LK+ A + ++ QV KSG
Sbjct: 407 GYSQYWEDM--EALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGF 464
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK 220
SD+Y N+L+ YG C DA ++F++ +VS+ +IT + EA+ F++
Sbjct: 465 HSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLE 524
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
M+D+ +PD +L+AC L GK +H+ +++ G VL+ G +L++MYAKCG+
Sbjct: 525 MQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGS 584
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
+ A FS + E + +WSAMI GLAQHG+ +AL+LF+ M +SPN++T + VL A
Sbjct: 585 IDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGA 644
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPI 400
CNHAG+V + YF ME + G KPM+ HY M D+L RAG + EA + MPF+ N
Sbjct: 645 CNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANAS 704
Query: 401 VLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVR 459
V ALL A+ IH D + +G L LEP S V++AN YA G WE V+ VR
Sbjct: 705 VWGALLGAARIHKDVE----LGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVR 760
Query: 460 RFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
R M++ +KK GMSW+E+ ++ F G S IY L+ L+
Sbjct: 761 RLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELS 807
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 162/293 (55%), Gaps = 6/293 (2%)
Query: 34 FLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
L CC+ K L QIHA I SGL +D I L+ S + YAR L + +
Sbjct: 62 LLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINL--YSKCRXFGYARK-LVDESS 118
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
+ + W+ LI GYA + A+ F +M G+K EFT+ VLKAC+ + L G Q
Sbjct: 119 EPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQ 178
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
V V SG + DV+ N LV Y C D+ ++FD++ ER+VVSWN + + V+ +
Sbjct: 179 VHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDF 238
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
GEAVG F +M G +P+E ++ +++ACT L + S GK +H LI+ G + A
Sbjct: 239 CGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANA 298
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
L+DMYAK G + A +F ++++ ++ +W+A+I G H + E+ALEL MK
Sbjct: 299 LVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMK 351
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 155/320 (48%), Gaps = 19/320 (5%)
Query: 106 WSDRPRE-AVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDV 164
+S+ P+ A+ ID + PT +Y +L C L G+Q+ A++TKSGL D
Sbjct: 34 FSEDPQTTAILNLID--KGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDP 91
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL 224
N+L+ Y CR A K+ D+ E +VSW+ +I+ +N G A+ F +M L
Sbjct: 92 SIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLL 151
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCA 284
G + +E T VL AC+ + +L +GK VH ++ G + + L+ MYAKC +
Sbjct: 152 GVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDS 211
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA 344
+ LF + E NV +W+A+ Q + EA+ LF M S I PN + ++ AC
Sbjct: 212 KRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACT-- 269
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHY-------HTMADILARAGHLKEAYTFIMNMPFQP 397
G R + +HG +++ Y + + D+ A+ G L +A + + QP
Sbjct: 270 -----GLRDSSRGKIIHGY-LIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIK-QP 322
Query: 398 NPIVLRALLSASSIHDAKYQ 417
+ + A+++ +H+ Q
Sbjct: 323 DIVSWNAVIAGCVLHEHHEQ 342
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 177/480 (36%), Positives = 256/480 (53%), Gaps = 32/480 (6%)
Query: 38 CCSKKHLYQ----IHAQIQVSGLQNDAQILKEL----VRFCTLSSSKNLTYARSILCNYV 89
CCS + Q +H I G + ++ L V+F L +++L
Sbjct: 64 CCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLF---------- 113
Query: 90 NDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL 145
D +P + W +I Y+ + +A+ I M R G++P FTY VL+AC GL
Sbjct: 114 -DEMPERNVVSWTTMISAYS-NKLNDKALKCLILMFREGVRPNMFTYSSVLRAC---DGL 168
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
Q+ + K+GL+SDV+ + L+ Y +A VFD+M R +V WN II
Sbjct: 169 PNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGF 228
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
+N EA+ F +MK GF D+ T+ VL ACT L L LG+ VH+ +++ L
Sbjct: 229 AQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKFDQDL-- 286
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
L ALIDMY KCG++ A FSRM E +V +WS M+ GLAQ+GY+ +ALELF +MK S
Sbjct: 287 ILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKES 346
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
PNY+T LGVL AC+HAG+VE G+ YF M+ + G+ P R HY + D+L RAG L E
Sbjct: 347 GSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDE 406
Query: 386 AYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANK 445
A I M +P+ + R LL A +H + ++++ELEP + ++++N
Sbjct: 407 AVKLIHEMECEPDSVTWRTLLGACRVH---RNVDLAIYAAKKIIELEPEDAGTYILLSNI 463
Query: 446 YAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
YA WE V+ VR+ M N G++K G SW+E+ IH F G S ++ I Q L L
Sbjct: 464 YANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRLNDL 523
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 159/352 (45%), Gaps = 20/352 (5%)
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
YV D P P N + A+ M+R G+ TY ++K C+ + E
Sbjct: 16 YVAD--PSPLVNEFANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQE 73
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G +V ++ G + ++ N L+ Y +A +FD+M ER+VVSW +I+
Sbjct: 74 GKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISA-YS 132
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
N +A+ + M G P+ T VL AC L NL + +H +I+ G + +
Sbjct: 133 NKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFV 189
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
+ALID+Y+K + A +F M ++ W+++I G AQ+ EAL LF MK +
Sbjct: 190 RSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGF 249
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR--IHYHTMADILARAGHLKE 385
+ T VL AC ++E G + HVH +K + I + + D+ + G L++
Sbjct: 250 LADQATLTSVLRACTGLALLELGRQV-----HVHVLKFDQDLILNNALIDMYCKCGSLED 304
Query: 386 AYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
A + M V + ++S S++ Q+G + ++ GS+
Sbjct: 305 ANSAFSRM-------VEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSR 349
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 133/278 (47%), Gaps = 17/278 (6%)
Query: 33 SFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDS 92
S L+ C +L Q+H I +GL++D + L+ S +L A + D
Sbjct: 160 SVLRACDGLPNLRQLHCGIIKTGLESDVFVRSALID--VYSKWSDLDNALGVF-----DE 212
Query: 93 VP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
+P + WN++I G+A + EA+ +F MKR G + T VL+AC ++ L G
Sbjct: 213 MPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELG 272
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
QV +V K D D+ NN L+ Y C DA F M E+ V+SW+ ++ +N
Sbjct: 273 RQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQN 330
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER--GTVLNCQ 266
+ +A+ F MK+ G P+ T+L VL AC+ G + G W + + +++ G +
Sbjct: 331 GYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKG-WYYFRSMKKLFGVDPGRE 389
Query: 267 LGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMI 303
LID+ + G + A L ME E + TW ++
Sbjct: 390 HYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLL 427
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 171/466 (36%), Positives = 252/466 (54%), Gaps = 22/466 (4%)
Query: 48 HAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPWNNLIRG 103
H+ + L +D L+ S + +AR + D +P + WN++I G
Sbjct: 139 HSLVFKLALHSDPHTTHSLITM--YSRCGRVAFARKVF-----DEIPRRDLVSWNSMIAG 191
Query: 104 YAWSDRPREAVWVFIDMKRR-GIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
YA + REAV VF +M RR G +P E + VL AC E+ L G V+ V + G+
Sbjct: 192 YAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTL 251
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
+ Y + L+ Y C A ++FD M R V++WN +I+ +N EA+ F MK
Sbjct: 252 NSYIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMK 311
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
+ ++ T+ VLSAC +G L LGK + +RG + + TALIDMYAKCG++
Sbjct: 312 EDCVTENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLA 371
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN--SSISPNYVTFLGVLCA 340
A+ +F M + N +W+AMI LA HG A+EAL LF M + PN +TF+G+L A
Sbjct: 372 SAQRVFKEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSA 431
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPI 400
C HAG+V +GYR F M + G+ P HY M D+LARAGHL EA+ I MP +P+ +
Sbjct: 432 CVHAGLVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKV 491
Query: 401 VLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRR 460
L ALL A +K +G V R +LE++P S N +I + YA + MWE + +R
Sbjct: 492 TLGALLGACR---SKKNVDIGERVIRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRL 548
Query: 461 FMKNVGLKKMKGMSWVELGGSIHRFYSG----YDSQVELAGIYQIL 502
M+ G+ K G SW+E+ +H F++G DS ++L+ I +L
Sbjct: 549 LMRQKGITKTPGCSWIEVENHLHEFHAGDGLCLDS-IDLSNIIDLL 593
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 203/389 (52%), Gaps = 15/389 (3%)
Query: 30 QCLSFL-KLCCSKKHLYQIHAQIQV-SGLQN-DAQILKELVRFCTLSSSKNLTYARSILC 86
+CL FL K C S K L Q+HAQ+ V S + + + +L + + KN TYA +
Sbjct: 19 KCLVFLAKQCSSSKTLQQVHAQMVVKSSIHSPNNHLLSKAIHL------KNFTYASLLFS 72
Query: 87 NYVNDSVPIPWNNLIRGY--AWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
+ +N +IR W P A+ +F M + P FT+PF +CA ++
Sbjct: 73 HIAPHPNDYAFNIMIRALTTTWHHYPL-ALTLFHRMMSLSLSPNNFTFPFFFLSCANLAV 131
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L+ + V K L SD +T ++L+ Y C R A KVFD++ R +VSWN +I
Sbjct: 132 LSPARAAHSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAG 191
Query: 205 CVENLWLGEAVGYFVKM-KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
+ EAV F +M + GFEPDE +++ VL AC ELG+L LG+WV ++ERG L
Sbjct: 192 YAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTL 251
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
N +G+ALI MYAKCG +G AR +F M +V TW+A+I G AQ+G A+EA+ LF MK
Sbjct: 252 NSYIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMK 311
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
++ N +T VL AC G ++ G + E G + + D+ A+ G L
Sbjct: 312 EDCVTENKITLTAVLSACATIGALDLG-KQIDEYASQRGFQHDIFVATALIDMYAKCGSL 370
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIH 412
A MP Q N A++SA + H
Sbjct: 371 ASAQRVFKEMP-QKNEASWNAMISALASH 398
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 177/509 (34%), Positives = 270/509 (53%), Gaps = 38/509 (7%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+S L C + K + QIHAQ+ V G+ N+ + V L ++ NL YA +L N+ N+
Sbjct: 13 ISLLNSCTTLKEMKQIHAQLVVKGILNNPHFHGQFVATIALHNTTNLDYANKLL-NHNNN 71
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDM---KRRGIKPTEFTYPFVLKACAEISGLNEG 148
N++IR Y+ S P ++ + ++ + P +T+ F+++ CA++ G
Sbjct: 72 PTLFTLNSMIRAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAHVTG 131
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYG------SCRRKRD---------------AC--- 184
+ V V K G + D + LV Y SC D AC
Sbjct: 132 LCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACAKC 191
Query: 185 -------KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVL 237
K+FD+M ER V+WN +I + EA+ F M+ G + +E +M++VL
Sbjct: 192 GDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVL 251
Query: 238 SACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVW 297
SACT L L G+WVH + + LGTAL+DMYAKCG V A +F M+E NV+
Sbjct: 252 SACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVY 311
Query: 298 TWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM 357
TWS+ I GLA +G+ EE+L+LF++MK + PN +TF+ VL C+ G+VE+G ++F M
Sbjct: 312 TWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEGRKHFDSM 371
Query: 358 EHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQ 417
+V+GI P HY M D+ RAG LKEA FI +MP +P+ ALL A ++ K
Sbjct: 372 RNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHACRMYKNKE- 430
Query: 418 DGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVE 477
+G +R+++ELE + V+++N YA+ WE VS++R+ MK G+KK+ G S +E
Sbjct: 431 --LGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVKKLPGCSVIE 488
Query: 478 LGGSIHRFYSGYDSQVELAGIYQILETLN 506
+ G +H F G S I LE ++
Sbjct: 489 VDGEVHEFIVGDKSHPRYDEIEMKLEEIS 517
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 174/512 (33%), Positives = 266/512 (51%), Gaps = 39/512 (7%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LS LK C + KHL+Q H + GL D +L + C SS Y+ SI +
Sbjct: 45 LSLLKQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEAC--SSLGFSHYSHSIFTHKTRP 102
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
+ + +N +I+ + + EA+ ++ + ++ ++ PFVLKA + ++ G Q+
Sbjct: 103 DIYL-YNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQI 161
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC-------------------- 191
+GL SD++ L++ Y SC +A ++FD +C
Sbjct: 162 HCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDV 221
Query: 192 -----------ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
ER+V+SW +I + EA+ F +M+ EPDE ML LSAC
Sbjct: 222 DNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSAC 281
Query: 241 TELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
LG L LG+W+H + + G L ALIDMYAKCG + A +F ME +V TW+
Sbjct: 282 AHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWT 341
Query: 301 AMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHV 360
+MI GLA HG EALE+FS M+ + I PN +TF+ +L AC H G+VE G YF M
Sbjct: 342 SMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTK 401
Query: 361 HGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH-DAKYQDG 419
+GIKP HY M D+L RAG L+EA + MPF+ N + +LL+A+ IH DA+
Sbjct: 402 YGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAE---- 457
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
+G + + L+++EP S N +++N YA W + VR+ M++ G+KKM G S +E+
Sbjct: 458 LGKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCIEVN 517
Query: 480 GSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
+H F +G + I+++L +NL K+
Sbjct: 518 NRVHEFVAGDKLHPQSERIFEVLCKINLQSKI 549
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 168/468 (35%), Positives = 255/468 (54%), Gaps = 6/468 (1%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
I A GL D +L L+ +S +++ A+ +L + V ++ + WN +I Y
Sbjct: 141 IQAYAVKRGLMADRFVLSSLIHM--YASCRDVAAAQ-LLFDAVEENGVVMWNAIITAYMK 197
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+ E V +F M G+ E T V+ AC I G V V + GL +
Sbjct: 198 NGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNL 257
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
L+ Y C A ++FD M R VV+W+ +I+ + EA+ F +M+
Sbjct: 258 MTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEV 317
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
EP++ TM+ VLSAC LG L GKWVH + + L LGTAL+D YAKCG + A
Sbjct: 318 EPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVE 377
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
F M N WTW+A+I G+A +G EALELFS+M+ +SI P VTF+GVL AC+H+ +
Sbjct: 378 AFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCL 437
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALL 406
VE+G R+F M +GIKP HY + D+L RAG + EAY FI MP +PN ++ RALL
Sbjct: 438 VEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALL 497
Query: 407 SASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVG 466
S+ ++H +G E ++++ L P S + ++++N YA VG W+ + +R+ MK+ G
Sbjct: 498 SSCAVHK---NVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRG 554
Query: 467 LKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
++K G S +EL G + F++ +L IYQ +E + +K+ +
Sbjct: 555 IEKTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGY 602
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 124/358 (34%), Positives = 184/358 (51%), Gaps = 5/358 (1%)
Query: 42 KHLYQIHAQIQVSG-LQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP-WNN 99
++L Q+HA + SG L + L+ +S L YA S+ + P +N
Sbjct: 30 RYLPQLHAALIKSGELTGSPKCFHSLLE-AAAASPTLLPYAVSLFRLGPRPPLSTPCYNV 88
Query: 100 LIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
L+R + P +A+ +F++M + P + T LK+C+ + L+ G +QA K
Sbjct: 89 LMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKR 148
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
GL +D + ++L+ Y SCR A +FD + E VV WN IIT ++N E V F
Sbjct: 149 GLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMF 208
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
M ++G DE T++ V++AC +G+ LGKWV + E+G V N L TALIDMYAKC
Sbjct: 209 KGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKC 268
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
G +G AR LF M+ +V WSAMI G Q EAL LFS M+ + + PN VT + VL
Sbjct: 269 GELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVL 328
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
AC G +E G ++ H + I + D A+ G + +A +MP +
Sbjct: 329 SACAVLGALETG-KWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVK 385
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 176/513 (34%), Positives = 268/513 (52%), Gaps = 71/513 (13%)
Query: 30 QCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
Q S + C + + L Q+HA + V+GL + +L+EL+ + S + YA +
Sbjct: 15 QQSSLWQKCTNFRSLKQLHAFLIVNGLNSTTSVLRELIFVSAIVVSGTMDYAHQLFAQIS 74
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+ + WN +IRG A + +P AV ++ M+ RG++P +FT+ FVLKAC ++S + G
Sbjct: 75 QPDIFM-WNTMIRGSAQTLKPATAVSLYTQMENRGVRPDKFTFSFVLKACTKLSWVKLGF 133
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSC------------------------------RR 179
+ V KSG S+ + N L+ F+ +C R
Sbjct: 134 GIHGKVLKSGFQSNTFVRNTLIYFHANCGDLATARALFDASAKREVVPWSALTAGYARRG 193
Query: 180 KRD-ACKVFDDMCERSVVSWNVIITVCVEN-------------------LWLGEAVGY-- 217
K D A ++FD+M + +VSWNV+IT ++ W GY
Sbjct: 194 KLDVARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIAGYVL 253
Query: 218 ----------FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER--GTVLNC 265
F M+DLG PD+ TML +LSA +LG+L +GK +H + + G L+
Sbjct: 254 SRLNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGD-LSV 312
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
L ALIDMYAKCG++G A +F M + + +W+++I GLA HG+AEE++ LF M
Sbjct: 313 LLSNALIDMYAKCGSIGNALEVFQGMRKKDTSSWNSIIGGLALHGHAEESINLFQEMLRL 372
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
+ PN +TF+ VL AC+HAG V +G YF+ M++V I+P HY M DIL RAG L E
Sbjct: 373 KMKPNEITFVAVLVACSHAGKVREGRMYFNLMKNVFKIEPNIKHYGCMVDILGRAGLLIE 432
Query: 386 AYTFIMNMPFQPNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
A+ FI M +PN I+ R LL A +H D + +G +LL++ S + V+++N
Sbjct: 433 AFDFIDTMEIEPNAIIWRTLLGACRVHGDVE----LGRRANEQLLKMRKDESGDYVLLSN 488
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVE 477
YA G W+ V VR+ M + G+KK G S ++
Sbjct: 489 IYASQGEWDGVQKVRKLMDDGGVKKKVGHSLID 521
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 177/510 (34%), Positives = 278/510 (54%), Gaps = 18/510 (3%)
Query: 10 NHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVR- 68
+H+ P S S L KA L + S HL Q HA I +G D+ I LV+
Sbjct: 37 HHLIPNGHSTETSKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKS 96
Query: 69 FCTLSSSKNLTYARSI-LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKP 127
+ +S+++ L++ S+ + ++V WN +I+ ++ P +A+ ++ +M +P
Sbjct: 97 YANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRP 156
Query: 128 TEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVF 187
++TYP VLKAC++ + EG+QV A++ K GL D + ++ +R Y S R +A ++
Sbjct: 157 NKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRIL 216
Query: 188 DDMCERSVVSWNVIITVCVENL--WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGN 245
DD + VC+ + EA+ F +M+ P + + VLSAC LG
Sbjct: 217 DD-------KGGEVDAVCMPDRKGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGA 269
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
L G+W+H L+ LGT+L+DMYAKCG + A +F +M V +W+AMI G
Sbjct: 270 LDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGG 329
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKP 365
LA HG AE+A++LFS M I+PN +TF+GVL AC H G+V+ G F+ M +G++P
Sbjct: 330 LAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEP 386
Query: 366 MRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVR 425
HY + D+L RAG L EA + ++P +P P V ALL A H +G V
Sbjct: 387 QIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHG---NVELGERVG 443
Query: 426 RRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG-GSIHR 484
+ LLELEP+ S +++N YA+ G WE+V VR+ MK G+K G S ++LG G +H+
Sbjct: 444 KILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHK 503
Query: 485 FYSGYDSQVELAGIYQILETLNLHMKVLNF 514
F G S ++ IYQ+L+ + +++ +
Sbjct: 504 FIIGDGSHPQVKDIYQMLDKVKERLQMEGY 533
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 178/486 (36%), Positives = 261/486 (53%), Gaps = 20/486 (4%)
Query: 33 SFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILCNY 88
S L+ C ++K + Q+HAQ+ ++G D I +LV +C S L+ AR +
Sbjct: 80 SLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDS---LSSARLLF--- 133
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
D +P WN LIRGYAW+ AV ++ M G+ P FT+PFVLKACA +S
Sbjct: 134 --DRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSA 191
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
+ G ++ +V ++G + DV+ L+ Y C A +VFD + R V WN ++
Sbjct: 192 IEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAA 251
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
+N + +M G P E T++ +SA + L G+ +H + +
Sbjct: 252 YSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESH 311
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
++ TAL+DMYAKCG+V AR LF R+ V +W+AMI G A HG+A EAL+LF M N
Sbjct: 312 DKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEM-N 370
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
P+++TF+GVL AC+H G++E+G+ +F M + I P HY M D+L +G L
Sbjct: 371 RVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLD 430
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
EAY IM M P+ V ALL++ IH A + +G RL+ELEP + N VI++N
Sbjct: 431 EAYNLIMQMKVLPDSGVWGALLNSCKIH-ANVE--LGEIALERLIELEPDDAGNYVILSN 487
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILET 504
YA+ G WE V+ +R+ M + LKK SW+E+ +H F SG S IY LE
Sbjct: 488 IYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELER 547
Query: 505 LNLHMK 510
+ MK
Sbjct: 548 VGGLMK 553
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 119/262 (45%), Gaps = 1/262 (0%)
Query: 125 IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDAC 184
+ PT Y +L++C + G Q+ A V +G D LV Y C A
Sbjct: 71 LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130
Query: 185 KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELG 244
+FD + + ++ WNV+I N AV + +M D G PD T VL AC L
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190
Query: 245 NLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMIL 304
+ G+ +H +++ G + +G ALIDMYAKCG VG AR +F ++ + W++M+
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLA 250
Query: 305 GLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIK 364
+Q+G+ + L L S M + + P T + + A + G R H + +
Sbjct: 251 AYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQG-RELHGLSWRQEFE 309
Query: 365 PMRIHYHTMADILARAGHLKEA 386
+ D+ A+ G ++ A
Sbjct: 310 SHDKVKTALVDMYAKCGSVRVA 331
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 179/539 (33%), Positives = 271/539 (50%), Gaps = 80/539 (14%)
Query: 13 FPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELV-RFCT 71
FPP P LSF ++ S L+Q HA I SGL + L+ T
Sbjct: 5 FPPPP-------------ILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVST 51
Query: 72 LSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFT 131
S ++ + YA SI N + + WN +IR YA S P A+ +F M + P ++T
Sbjct: 52 NSHAQAIPYAHSIFSRIPNPNSYM-WNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYT 110
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSC------------RR 179
+ F LK+C SG+ EG Q+ +V K+GL D++ N L+ Y SC
Sbjct: 111 FTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRML 170
Query: 180 KRD-------------------ACKVFDDMCERSVVSWNVIIT----------------- 203
+RD AC +FD+M ER+V SWN +I+
Sbjct: 171 ERDVVSWNALLSAYAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGE 230
Query: 204 VCVENL--WLGEAVGY------------FVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
V+N+ W GY F M+ G +PD T++ VLSAC +G LS G
Sbjct: 231 TPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQG 290
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
+WVH + + G ++ + TAL+DMY+KCG++ A +F+ ++ TW+++I GL+ H
Sbjct: 291 EWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTH 350
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIH 369
G + AL++FS M PN VTF+ VL AC+ AG++++G F+ M HVHGI+P H
Sbjct: 351 GSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEH 410
Query: 370 YHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLL 429
Y M D+L R G L+EA + MP + +V +LL A H + V ++LL
Sbjct: 411 YGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHG---NVELAERVAQKLL 467
Query: 430 ELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
EL P+ S + V ++N YA +G W+ V VR+ M+ G++K G S +E+ G+++ F +G
Sbjct: 468 ELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPGCSMIEVDGTVYEFLAG 526
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 161/412 (39%), Positives = 237/412 (57%), Gaps = 3/412 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I WN +I G++ ++ EA +F M GI + T VLK+ A + Q+ A
Sbjct: 279 IAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHAL 338
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
KSG + D Y N+L+ YG C DA +VF++ +V + ++T ++ EA
Sbjct: 339 SLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEA 398
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ +++M+D G +PD +L+AC L GK VH+ +++ G + + G +L++M
Sbjct: 399 LRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNM 458
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG++ A FSR+ + +WSAMI GLAQHGY +EAL+LF M + PN++T
Sbjct: 459 YAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITL 518
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ VLCACNHAG+V + YF+ M+ + GI+PM+ HY M D+L RAG L+ A + MP
Sbjct: 519 VSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMP 578
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
FQ N +V ALL A+ IH K D +G + LL LEP S V++AN YA VGMW+K
Sbjct: 579 FQANALVWGALLGAARIH--KNID-LGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDK 635
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
V+ VRR MK+ +KK GMSW+E+ ++ F G S IY L+ L+
Sbjct: 636 VARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDELS 687
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 191/408 (46%), Gaps = 18/408 (4%)
Query: 33 SFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S LK C K L Q+H + V+G +D + LV + ARS+ + +
Sbjct: 15 SVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLV--ILYAKCGGFGDARSLF-DAI 71
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
D + WN L Y SD EAV +F DM GI+P EF+ ++ C + +G
Sbjct: 72 PDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGR 131
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
++ + K G DSD ++ N LV Y DA VFD++ + +VSWN II CV +
Sbjct: 132 KIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHE 191
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+ A+ +M G P+ T+ L AC + LG+ +H LI+ + LG
Sbjct: 192 YHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGV 251
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
LIDMY+KC ++ ARL+F M E ++ W+A+I G +Q+ EEA LF M I
Sbjct: 252 GLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGF 311
Query: 330 NYVTFLGVLCACNHAGMVEDGY--RYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
N T VL ++ Y R H + G + +++ D + GH+++A
Sbjct: 312 NQTTLSTVL---KSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDAT 368
Query: 388 TFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
F+ +PIV L +S+ A QDG G E R LE++ RG
Sbjct: 369 RV-----FEESPIVDLVLF--TSLVTAYAQDGQGEEALRLYLEMQDRG 409
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 118/227 (51%), Gaps = 2/227 (0%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M GIK EF +P VLKAC L G QV V +G DSD + N+LV Y C
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
DA +FD + +RSVVSWN + + V + GEAV F M G P+E ++ +++
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
CT L + G+ +H LI+ G + AL+DMYAK G + A +F + + ++ +W
Sbjct: 121 CTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSW 180
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
+A+I G H Y ALEL M S + PN T L AC AGM
Sbjct: 181 NAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKAC--AGM 225
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 114/265 (43%), Gaps = 32/265 (12%)
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
M LG + +E VL ACT +L LGK VH ++ G + + +L+ +YAKCG
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
G AR LF + + +V +W+A+ EA+ LF +M S I PN + ++
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120
Query: 341 CNHAGMVEDGY--RYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
C +ED R H G + + D+ A+ G L++A + + + +P+
Sbjct: 121 CTG---LEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASS-VFDEIAKPD 176
Query: 399 PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
+ A+++ +H E R LEL +++ GM +
Sbjct: 177 IVSWNAIIAGCVLH----------EYHHRALELLREMNKS-----------GMCPNM--- 212
Query: 459 RRFMKNVGLKKMKGMSWVELGGSIH 483
F + LK GM+ ELG +H
Sbjct: 213 --FTLSSALKACAGMALRELGRQLH 235
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 166/414 (40%), Positives = 235/414 (56%), Gaps = 12/414 (2%)
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D +P + W +I Y+ + +A+ + M R G++P FTY VL+AC G
Sbjct: 22 VFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVLRAC---DG 78
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L Q+ + K GLDSDV+ + L+ Y +A +VFD+M +V W+ II
Sbjct: 79 LFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAG 138
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
+N EA+ F +MK GF +TT+ VL ACT L L LG+ VH+ +++ L
Sbjct: 139 FAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLKYDQDL- 197
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
L AL+DMY KCG++ A +F RM E +V +WS MI GLAQ+GY++EAL+LF +MK
Sbjct: 198 -ILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKV 256
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
I PNYVT +GVL AC+HAG+VE+G YFH M+ + GI P R HY M D+L RAG L
Sbjct: 257 LGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLS 316
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
EA I M +P+ + RALL+A +H V +++L L+P+ + V+++N
Sbjct: 317 EAVDLINEMECEPDAVTWRALLNACRVH---RNVDVAIHAAKQILRLDPQDAGTYVLLSN 373
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGI 498
YA W V+ VRR M N G+KK G SW+E+ IH F G S ++ I
Sbjct: 374 IYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGDRSHPQIREI 427
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 122/258 (47%), Gaps = 17/258 (6%)
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
N L+ Y DA VFD M +R+VVSW +I+ +A+ + V M G
Sbjct: 4 NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
P+ T VL AC L NL + +H +I+ G + + +ALID+Y++ G + A +
Sbjct: 64 PNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRV 120
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMV 347
F M ++ WS++I G AQ+ +EAL LF MK + T VL AC ++
Sbjct: 121 FDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALL 180
Query: 348 EDGYRYFHEMEHVHGIKPMR--IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
E G + HVH +K + I + + D+ + G L++A + M V + +
Sbjct: 181 ELGRQV-----HVHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRM-------VEKDV 228
Query: 406 LSASSIHDAKYQDGVGNE 423
+S S++ Q+G E
Sbjct: 229 ISWSTMIAGLAQNGYSKE 246
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 158/413 (38%), Positives = 235/413 (56%), Gaps = 3/413 (0%)
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N++IR Y ++ ++++F M + I P T+P VLKA A++ G + V +
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
G DVYT+ LV Y +C DA ++FD+M ER+ V+WN +IT N +A+
Sbjct: 118 MGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDA 177
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
F M G +P E T++VVLSAC+ LG + GKW+H + LN +GTALIDMYAK
Sbjct: 178 FRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAK 237
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CGAV +F + E NV+TW+ +I G A +G + AL+ FS M + P+ VTFLGV
Sbjct: 238 CGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGV 297
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
LCAC H G+V +G F M+ G++P HY M D+L RAG L+EA I +M +P
Sbjct: 298 LCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEP 357
Query: 398 NPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSN 457
+PI+ RALL A +H +G + +RL+ELEP +N V+++N Y+ W +V
Sbjct: 358 DPIIWRALLCACRVHG---NTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGK 414
Query: 458 VRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+R M G++K+ G S +E+ ++ F + D + E IY+ L+ L +K
Sbjct: 415 LRGMMSLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLK 467
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 121/264 (45%), Gaps = 37/264 (14%)
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P + WN LI GY + + +A+ F M G +P+E T VL AC+ + N
Sbjct: 148 DEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFN 207
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
+G + + + L +V+ L+ Y C + KVF+++ E++V +WNV+I+
Sbjct: 208 QGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYA 267
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
N A+ F +M F+PDE T L VL AC G ++ G+W + + + Q
Sbjct: 268 MNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQ-------Q 320
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
G L R+E + M+ L + G EEALEL +M S
Sbjct: 321 FG------------------LQPRIEH-----YGCMVDLLGRAGLLEEALELIQSM---S 354
Query: 327 ISPNYVTFLGVLCACNHAGMVEDG 350
I P+ + + +LCAC G + G
Sbjct: 355 IEPDPIIWRALLCACRVHGNTKLG 378
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 177/521 (33%), Positives = 269/521 (51%), Gaps = 40/521 (7%)
Query: 30 QCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
+ + L+ C S ++HAQI + LQ + +L +L+R T L +L + +
Sbjct: 10 EVVRILERCSSLNQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFSQL 69
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+ P W LIR YA +A+ + M++R + P FT+ + ACA + G
Sbjct: 70 HTPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGA 129
Query: 150 QVQA-NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT----- 203
Q+ A + G SD+Y NN ++ Y C R A VFD+M ER V+SW +I
Sbjct: 130 QLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRI 189
Query: 204 ------------VCVENL--WLGEAVGY------------FVKMKDLGFEPDETTMLVVL 237
+ V+++ W GY F +++D G E DE T++ V+
Sbjct: 190 GDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVI 249
Query: 238 SACTELGNLSLGKWVHLQLIER---GTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI 294
SAC +LG W+ + E G N +G+ALIDMY+KCG V A +F M E
Sbjct: 250 SACAQLGASKYANWIR-DIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRER 308
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYF 354
NV+++S+MI+G A HG A A++LF +M + + PN+VTF+GVL AC+HAG+V+ G + F
Sbjct: 309 NVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVDQGQQLF 368
Query: 355 HEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDA 414
ME +G+ P Y M D+L+RAG+L++A + MP + + V ALL AS +H
Sbjct: 369 ASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGALLGASHVHG- 427
Query: 415 KYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMS 474
V +RL ELEP N ++++N YA G W+ VS VR+ ++ LKK G S
Sbjct: 428 --NPDVAEIASKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNLKKNPGWS 485
Query: 475 WVEL-GGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
WVE G IH+F +G S ++ I + L L +K + +
Sbjct: 486 WVEAKNGMIHKFVAGDVSHPKINEIKKELNDLLERLKGIGY 526
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 175/472 (37%), Positives = 259/472 (54%), Gaps = 9/472 (1%)
Query: 45 YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGY 104
+Q +A I GL DA + LV + + +R + V + W LI G
Sbjct: 123 FQFYAHIVKFGLDFDAFVQNSLVS--AFAHCGYVDCSRRLFIETAKKDV-VSWTALINGC 179
Query: 105 AWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG-LDSD 163
+ R EA+ F++M+ G++ E T VL A A + + G V +SG + D
Sbjct: 180 LRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWD 239
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
VY + LV Y C DA KVF++M R++VSW +I V+ EA+ F +M
Sbjct: 240 VYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMII 299
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNCQLGTALIDMYAKCGAVG 282
G EP+++T+ L+AC +LG+L G+W+H + ++R + LN +LGTAL+DMY+KCG V
Sbjct: 300 EGIEPNQSTVTSALTACAQLGSLDQGRWLH-EYVDRSKLGLNSKLGTALVDMYSKCGCVD 358
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
A L+F ++ +V+ W+AMI GLA G A +L LFS M S + PN VTFLGVL AC
Sbjct: 359 EALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACA 418
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVL 402
H G+V++G F M + ++P HY M D+L RAG L+EA FI +MP +P P V
Sbjct: 419 HGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVW 478
Query: 403 RALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFM 462
AL S IH A +G + L++L+P S +++AN Y+ WE +NVRR M
Sbjct: 479 GALFSGCMIHKAFE---LGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLM 535
Query: 463 KNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
K G+ K G SW+E+ G IH F + S E +Y +LE+++ +K+ +
Sbjct: 536 KGKGVDKSPGCSWIEVNGVIHEFIAFDKSHTESINVYMMLESVSAQLKLATY 587
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 185/364 (50%), Gaps = 13/364 (3%)
Query: 37 LCCSKK-----HLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LCC K HL Q + + SGL + L +++R S++K+L Y +L + +
Sbjct: 12 LCCFHKCGTFDHLKQTTSILITSGLAHHTFFLSDILR----SATKDLGYTL-LLFDRLAT 66
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
WN +IRG++ S +P+ + + ++ G+ P T+P +LKA +++ N Q
Sbjct: 67 PYIFLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRNENP-FQF 125
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
A++ K GLD D + N+LV + C + ++F + ++ VVSW +I C+ N
Sbjct: 126 YAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRA 185
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQLGTA 270
EA+ FV+M+ G E DE T++ VL A L ++ G+WVH +E G V+ + +G+A
Sbjct: 186 VEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSA 245
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
L+DMY+KCG A +F+ M N+ +W A+I G Q +EAL++F M I PN
Sbjct: 246 LVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPN 305
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
T L AC G ++ G R+ HE + + D+ ++ G + EA
Sbjct: 306 QSTVTSALTACAQLGSLDQG-RWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVF 364
Query: 391 MNMP 394
+P
Sbjct: 365 EKLP 368
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 157/408 (38%), Positives = 233/408 (57%), Gaps = 3/408 (0%)
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N++IR Y ++ ++++F M + I P T+P VLKA A++ G + V +
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
G DVYT+ LV Y +C DA ++FD+M ER+ V+WN +IT N +A+
Sbjct: 118 MGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDA 177
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
F M G +P E T++VVLSAC+ LG + GKW+H + LN +GTALIDMYAK
Sbjct: 178 FRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAK 237
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CGAV +F + E NV+TW+ +I G A +G + AL+ FS M + P+ VTFLGV
Sbjct: 238 CGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGV 297
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
LCAC H G+V +G F M+ G++P HY M D+L RAG L+EA I +M +P
Sbjct: 298 LCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEP 357
Query: 398 NPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSN 457
+PI+ RALL A +H +G + +RL+ELEP +N V+++N Y+ W +V
Sbjct: 358 DPIIWRALLCACRVHG---NTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGK 414
Query: 458 VRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+R M G++K+ G S +E+ ++ F + D + E IY+ L+ L
Sbjct: 415 LRGMMNLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNL 462
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 121/264 (45%), Gaps = 37/264 (14%)
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P + WN LI GY + + +A+ F M G +P+E T VL AC+ + N
Sbjct: 148 DEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFN 207
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
+G + + + L +V+ L+ Y C + KVF+++ E++V +WNV+I+
Sbjct: 208 QGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYA 267
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
N A+ F +M F+PDE T L VL AC G ++ G+W + + + Q
Sbjct: 268 MNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQ-------Q 320
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
G L R+E + M+ L + G EEALEL +M S
Sbjct: 321 FG------------------LQPRIEH-----YGCMVDLLGRAGLLEEALELIQSM---S 354
Query: 327 ISPNYVTFLGVLCACNHAGMVEDG 350
I P+ + + +LCAC G + G
Sbjct: 355 IEPDPIIWRALLCACRVHGNTKLG 378
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 153/416 (36%), Positives = 235/416 (56%), Gaps = 4/416 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I ++ S EA++ F M G+ P T+ +L AC +N+G Q+ +
Sbjct: 427 VSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSY 486
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS-VVSWNVIITVCVENLWLGE 213
+ K GLD + N+L+ Y C DA VF D+ E + +VSWN I++ C+++ GE
Sbjct: 487 IIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGE 546
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
F M +PD T+ +L C EL +L +G VH ++ G V++ + LID
Sbjct: 547 VFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLID 606
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MYAKCG++ AR +F + ++ +WS++I+G AQ G EAL LF MKN + PN VT
Sbjct: 607 MYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVT 666
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
+LGVL AC+H G+VE+G+ +++ ME GI P R H M D+LARAG L EA FI M
Sbjct: 667 YLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKM 726
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
F P+ + + LL++ H + +L+L+P S LV+++N +A VG W+
Sbjct: 727 GFNPDITMWKTLLASCKTHG---NVDIAERAAENILKLDPSNSAALVLLSNIHASVGNWK 783
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
+V+ +R MK +G++K+ G SW+ + IH F+S +S + IY +LE L L M
Sbjct: 784 EVARLRNLMKQMGVQKVPGQSWIAVKDQIHVFFSEDNSHQQRGDIYTMLEDLWLQM 839
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 151/319 (47%), Gaps = 2/319 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +I GY+ + + +A+ ++I M + G P T+ ++KAC ++ G Q+ +
Sbjct: 224 VSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGH 283
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V KSG D + N L+ Y + A VF + + ++SW +IT + + EA
Sbjct: 284 VIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEA 343
Query: 215 VGYFVKMKDLGF-EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
+ F M GF +P+E V SAC L G+ +H + G N G +L D
Sbjct: 344 LYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCD 403
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MYAK G + A F ++E ++ +W+A+I + G EA+ F M ++ + P+ +T
Sbjct: 404 MYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGIT 463
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
FL +LCAC + G + + + G+ +++ + + +L +A+ ++
Sbjct: 464 FLSLLCACGSPVTINQGTQIHSYIIKI-GLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDV 522
Query: 394 PFQPNPIVLRALLSASSIH 412
N + A+LSA H
Sbjct: 523 SENANLVSWNAILSACLQH 541
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 145/302 (48%), Gaps = 4/302 (1%)
Query: 111 REAVWVF-IDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNN 169
REA+ F K I+ TY ++ AC I L G ++ ++ KS D+ N+
Sbjct: 138 REALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNH 197
Query: 170 LVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPD 229
++ YG C +DA K FD M R+VVSW ++I+ +N +A+ +++M G+ PD
Sbjct: 198 ILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPD 257
Query: 230 ETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFS 289
T ++ AC G++ LG+ +H +I+ G + ALI MY + G + A +F+
Sbjct: 258 PLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFT 317
Query: 290 RMEEINVWTWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGMVE 348
+ ++ +W++MI G Q GY EAL LF +M + PN F V AC E
Sbjct: 318 MISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPE 377
Query: 349 DGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
G R H M G+ ++ D+ A+ G L A + P+ + A+++A
Sbjct: 378 FG-RQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIE-SPDLVSWNAIIAA 435
Query: 409 SS 410
S
Sbjct: 436 FS 437
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 183/431 (42%), Gaps = 21/431 (4%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S +K CC + Q+H + SG D ++ + + + +A + +
Sbjct: 263 SIIKACCIAGDIDLGRQLHGHVIKSGY--DHHLIAQNALISMYTRFGQIVHASDVF-TMI 319
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGI-KPTEFTYPFVLKACAEISGLNEG 148
+ I W ++I G+ EA+++F DM R+G +P EF + V AC + G
Sbjct: 320 STKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFG 379
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
Q+ K GL +V+ +L Y A + F + +VSWN II ++
Sbjct: 380 RQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDS 439
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+ EA+ +F +M G PD T L +L AC ++ G +H +I+ G +
Sbjct: 440 GDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVC 499
Query: 269 TALIDMYAKCGAVGCARLLFSRMEE-INVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
+L+ MY KC + A +F + E N+ +W+A++ QH A E LF M S
Sbjct: 500 NSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSEN 559
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
P+ +T +L C +E G + H G+ + + D+ A+ G LK A
Sbjct: 560 KPDNITITTILGTCAELASLEVGNQ-VHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHAR 618
Query: 388 TFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYA 447
+ NP ++S SS+ Q G+G+E R +NL + N+
Sbjct: 619 DVFGST---QNP----DIVSWSSLIVGYAQFGLGHEALNLF-----RMMKNLGVQPNEVT 666
Query: 448 EVGMWEKVSNV 458
+G+ S++
Sbjct: 667 YLGVLSACSHI 677
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 161/395 (40%), Positives = 224/395 (56%), Gaps = 7/395 (1%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M R P +FTYPFVLKACA I LN G V +V K G +V N LV Y CR
Sbjct: 1 MLERKKLPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRG 60
Query: 180 KRD----ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLV 235
A KVFD+M + VSW+ +I V +A+ F +M+ G PDE TM+
Sbjct: 61 GEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVS 120
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
VLSACT LG L LGKWV + + N +L ALIDM+AKCG V A LF M E N
Sbjct: 121 VLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERN 180
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
+ +W+++I GLA HG EA+ +F M S ++P+ V F+G+L AC+H+G+V+ G RYF
Sbjct: 181 IVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFD 240
Query: 356 EMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAK 415
M I P HY M D+L RAG +KEA F+ MP PNP+V R L++A H
Sbjct: 241 SMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHG-- 298
Query: 416 YQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSW 475
+ +G ++ R+L+ EP N V+++N YA++ WEK + +R M G+KK+ G +
Sbjct: 299 -ELKLGEKITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTM 357
Query: 476 VELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+EL I+ F +G S + IY++++ + MK
Sbjct: 358 IELDNEIYEFVAGDKSHAQSKEIYEMVDEMGKEMK 392
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 122/284 (42%), Gaps = 10/284 (3%)
Query: 35 LKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRF--CTLSSSKNLTYARSILCN-Y 88
LK C +L +H + G ++ + LV C + +AR + Y
Sbjct: 17 LKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEFARKVFDEMY 76
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
+DSV W+ +I GY R +A+ +F +M+ +G+ P E T VL AC + L G
Sbjct: 77 KSDSVS--WSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLGALELG 134
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
V++ V K + +V +N L+ + C A +F M ER++VSW +I +
Sbjct: 135 KWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMH 194
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK-WVHLQLIERGTVLNCQL 267
EAV F +M G PD+ + +LSAC+ G + GK + + V +
Sbjct: 195 GRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEH 254
Query: 268 GTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHG 310
++DM + G V A M + N W +I HG
Sbjct: 255 YGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHG 298
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 174/478 (36%), Positives = 256/478 (53%), Gaps = 9/478 (1%)
Query: 20 CNSDLLSKARQCLSFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSK 76
C+ + A + LK C S L ++HA I+ GL++D ++ L+R S
Sbjct: 121 CHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSI 180
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
N AR I N +N + I W +I YA S +EA + + M++ G KP TY +L
Sbjct: 181 N--EARRIFDNLMNHDI-ISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSIL 237
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
ACA L +V + +GL+ DV LV+ Y DA VFD M R VV
Sbjct: 238 NACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVV 297
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
SWNV+I E+ EA F++M+ G +PD L +L+AC G L K +H
Sbjct: 298 SWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHA 357
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
++ G ++ ++GTAL+ MY+K G++ AR++F RM+ NV +W+AMI GLAQHG ++AL
Sbjct: 358 LDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDAL 417
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
E+F M + P+ VTF+ VL AC+HAG+V++G + M V+GI+P H + M D+
Sbjct: 418 EVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDL 477
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGS 436
L RAG L EA FI NM P+ ALL + + +G V + L+L+P+ +
Sbjct: 478 LGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYG---NVELGELVAKERLKLDPKNA 534
Query: 437 QNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVE 494
V+++N YAE G W+ VS VR M+ G++K G SW+E+ IH F S E
Sbjct: 535 ATYVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPE 592
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 108/328 (32%), Positives = 173/328 (52%), Gaps = 6/328 (1%)
Query: 24 LLSKARQCLSFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTY 80
L++ + + LK C +K L Q+H I S ++ +A ++ L+ L
Sbjct: 24 LITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYI--ECGRLQE 81
Query: 81 ARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACA 140
AR + V S WN +I GY +A+ +F +M G++P TY +LKACA
Sbjct: 82 ARCVFDALVKKS-GASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACA 140
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
+S L G +V A + GL+SDV L+R YG C +A ++FD++ ++SW V
Sbjct: 141 SLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTV 200
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
+I ++ EA ++M+ GF+P+ T + +L+AC G L K VH ++ G
Sbjct: 201 MIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAG 260
Query: 261 TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS 320
L+ ++GTAL+ MYAK G++ AR++F RM+ +V +W+ MI A+HG EA +LF
Sbjct: 261 LELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFL 320
Query: 321 NMKNSSISPNYVTFLGVLCACNHAGMVE 348
M+ P+ + FL +L AC AG +E
Sbjct: 321 QMQTEGCKPDAIMFLSILNACASAGALE 348
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 175/365 (47%), Gaps = 20/365 (5%)
Query: 112 EAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLV 171
EA+ V ++ +RG+ F Y VLK C + L QV + KS ++ + + NNL+
Sbjct: 11 EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLL 70
Query: 172 RFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDET 231
Y C R ++A VFD + ++S SWN +I VE+ +A+ F +M G +P+
Sbjct: 71 HVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAG 130
Query: 232 TMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM 291
T +++L AC L L GK VH + G + ++GTAL+ MY KCG++ AR +F +
Sbjct: 131 TYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNL 190
Query: 292 EEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGY 351
++ +W+ MI AQ G +EA L M+ PN +T++ +L AC G ++
Sbjct: 191 MNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVK 250
Query: 352 RYFHEMEHVHGIKP---MRIHYHT-MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLS 407
R H H + + + T + + A++G + +A M +R ++S
Sbjct: 251 RV-----HRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMK-------VRDVVS 298
Query: 408 ASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVI----VANKYAEVGMWEKVSNVRRFMK 463
+ + A + G G+E L+++ G + I + N A G E V + R
Sbjct: 299 WNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHAL 358
Query: 464 NVGLK 468
+ GL+
Sbjct: 359 DSGLE 363
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 123/287 (42%), Gaps = 37/287 (12%)
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
L EA+ + G D + VL C + +L K VH +I+ N +
Sbjct: 9 LSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNN 68
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
L+ +Y +CG + AR +F + + + +W+AMI G +H +AE+A+ LF M + + PN
Sbjct: 69 LLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPN 128
Query: 331 YVTFLGVLCACN-----------HA----GMVEDGYRYFHEMEHVHG----IKPMR---- 367
T++ +L AC HA G +E R + ++G I R
Sbjct: 129 AGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFD 188
Query: 368 -------IHYHTMADILARAGHLKEAYTFIMNMP---FQPNPIVLRALLSASSIHDA-KY 416
I + M A++G+ KEAY ++ M F+PN I ++L+A + A K+
Sbjct: 189 NLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKW 248
Query: 417 QDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMK 463
V LEL+ R LV YA+ G + V MK
Sbjct: 249 VKRVHRHALDAGLELDVRVGTALV---QMYAKSGSIDDARVVFDRMK 292
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 169/479 (35%), Positives = 265/479 (55%), Gaps = 22/479 (4%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKN-LTYARSILCNYVNDSVPIP-------W 97
QIH+ I GL ++ +L +F SS N + YA S+L + ND P +
Sbjct: 140 QIHSLILKLGLHHNPLVL---TKFAATSSHFNAVHYASSVL--FPNDQTTPPPSHDAFLF 194
Query: 98 NNLIRGYAWSDRPR-EAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
N LIR +A + + A+ + M+R + P +FT+PFVLKACA + L G V A++
Sbjct: 195 NTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMV 254
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRD-----ACKVFDDMCERSVVSWNVIITVCVENLWL 211
K G + D + N LV Y C + A KVFD+ + V+W+ +I
Sbjct: 255 KFGFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIGGYARAGNS 314
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
AV F +M+ G PDE TM+ VLSAC +LG L LGKW+ + + + + +L AL
Sbjct: 315 ARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNAL 374
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
IDM+AKCG V A +F M+ + +W++MI+GLA HG EA+ +F M + P+
Sbjct: 375 IDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDD 434
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
V F+GVL AC+H+G+V+ G+ YF+ ME++ I P HY M D+L+RAG + EA F+
Sbjct: 435 VAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVR 494
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGM 451
MP +PN ++ R++++A A+ + +G V + L+ EP N V+++N YA++
Sbjct: 495 AMPVEPNQVIWRSIVTACH---ARGELKLGESVAKELIRREPSHESNYVLLSNIYAKLLR 551
Query: 452 WEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
WEK + VR M G++K+ G + +E+ I+ F +G S + IY+++E + +K
Sbjct: 552 WEKKTKVREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEMGREIK 610
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 178/521 (34%), Positives = 269/521 (51%), Gaps = 70/521 (13%)
Query: 22 SDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYA 81
+D + +Q S K C + L QIHA + + G ++ L+EL+ ++ S + YA
Sbjct: 7 NDRSTNRKQPSSLWKNCNNLLALKQIHATLIIKGFNSNRAALRELIFAGAMTISGAINYA 66
Query: 82 RSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAE 141
+ + + WN ++RG + S P + V ++ M+ RG+KP +FT+ F+LK C
Sbjct: 67 HQVFAQITEPDIFM-WNTMMRGSSQSKNPSKVVLLYTQMENRGVKPDKFTFSFLLKGCTR 125
Query: 142 ISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSW--- 198
+ G V V K G + + + N L+ F+ +C A +F D+ ERSVVSW
Sbjct: 126 LEWRKTGFCVHGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVVSWSAL 185
Query: 199 ----------------------------NVIITVCVEN-------------------LWL 211
NV+IT V+N W
Sbjct: 186 TAGYARRGELGVARQIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAPEKDVVTWN 245
Query: 212 GEAVGY------------FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE- 258
GY F +M+++G PDE TML +LSAC +LG+L +G+ +H + E
Sbjct: 246 TMIAGYVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSACADLGDLQVGRKLHCSISEM 305
Query: 259 -RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALE 317
RG L+ LG AL+DMYAKCG++ A +F +M E +V TW+++I GLA HG+AEE+++
Sbjct: 306 TRGD-LSVLLGNALVDMYAKCGSIEIALQVFKKMREKDVTTWNSVIGGLAFHGHAEESIK 364
Query: 318 LFSNMKN-SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
LF+ M+ +I PN +TF+GV+ AC+HAG VE+G RYF M + I+P IH+ M D+
Sbjct: 365 LFAEMQALKNIKPNEITFVGVIVACSHAGNVEEGRRYFKLMRERYDIEPNMIHHGCMVDL 424
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGS 436
L RAG L EA+ I M +PN I+ R LL A +H + NE RLL+L S
Sbjct: 425 LGRAGLLSEAFELIAKMEIEPNAIIWRTLLGACRVHGNVELGRLANE---RLLKLRRDES 481
Query: 437 QNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVE 477
+ V+++N YA G W+ VR+ M + G++K G S +E
Sbjct: 482 GDYVLLSNIYASAGEWDGAEEVRKLMDDGGVRKEAGRSLIE 522
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 171/498 (34%), Positives = 260/498 (52%), Gaps = 41/498 (8%)
Query: 14 PPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLS 73
PP S+ + L L L C + L Q H+QI GL D + +++FC +S
Sbjct: 11 PPSLSSAKAHKLP-----LYGLDSCSTMAELKQYHSQIIRLGLSADNDAMGRVIKFCAIS 65
Query: 74 SSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYP 133
S GY R ++++ M + + P +FTYP
Sbjct: 66 KS---------------------------GYLRWQLARNCIFMYSRMLHKSVSPNKFTYP 98
Query: 134 FVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER 193
+++AC + EG Q+ A+V K G +D ++ NNL+ Y + + A +VFD+M +R
Sbjct: 99 PLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQR 158
Query: 194 --SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
+ VSWN +I V++ L EA F +M+ D+ +LSACT LG L GKW
Sbjct: 159 DRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKW 218
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+H + + G L+ +L T +IDMY KCG + A +F+ + + + +W+ MI GLA HG
Sbjct: 219 IHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGK 278
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
E A+ELF M+ ++P+ +TF+ VL AC H+G+VE+G YF M V G+KP H+
Sbjct: 279 GEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFG 338
Query: 372 TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLEL 431
M D+L RAG L+EA I MP P+ VL AL+ A IH +G ++ ++++EL
Sbjct: 339 CMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHG---NTELGEQIGKKVIEL 395
Query: 432 EPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDS 491
EP S V++AN YA G WE V+ VR+ M + G+KK G S +E + F +G +
Sbjct: 396 EPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRA 455
Query: 492 QVELAGIY----QILETL 505
+ IY +ILET+
Sbjct: 456 HPQAKEIYAKLDEILETI 473
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 172/469 (36%), Positives = 247/469 (52%), Gaps = 42/469 (8%)
Query: 44 LYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRG 103
L Q+HA + + + L + C +SS +YA+ I ++ S WN +R
Sbjct: 31 LKQLHAHLLKTNSPLSSLPLSRVASVCAFNSS--FSYAKLIF-QLLDASEVTHWNTCLRS 87
Query: 104 YAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD 163
+A D P +A+ +F ++ I P +T FVLKAC+ + + G V V K GL S+
Sbjct: 88 FAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSN 147
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE---------------- 207
++ N +V Y C A KVFD M +R V++WN++I V+
Sbjct: 148 MFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPE 207
Query: 208 ---NLWLG------------EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
W EA+ F++M+D G P+E T++ VL AC ++GNL LG+ +
Sbjct: 208 RNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRI 267
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H G N ++ LIDMY KCG + A +F MEE V +WSAMI GLA HG A
Sbjct: 268 HDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRA 327
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
E+AL LF+ M N+ + PN VTF+G+L AC+H GMVE G +YF M +GI P HY
Sbjct: 328 EDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGC 387
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELE 432
M D+ +RAG L+EA+ FIMNMP PN +V ALL +H + E R L +L+
Sbjct: 388 MVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHK---NVKLAEEATRHLSKLD 444
Query: 433 PRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVG-----LKKMKGMSWV 476
P V+++N YAE G WE V+ VR+ M++ G L++MK +V
Sbjct: 445 PLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGTWEKLLQRMKLKGYV 493
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 173/481 (35%), Positives = 265/481 (55%), Gaps = 17/481 (3%)
Query: 44 LYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN------DSVPI-- 95
L ++AQ SG N+AQ++ + F S L A L Y++ D +P+
Sbjct: 170 LINMYAQ---SGEMNNAQLVFDQSNFRDAISFTALI-AGYALWGYMDRARQLFDEMPVKD 225
Query: 96 --PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
WN +I GYA R +EA+ +F DM++ + P E T VL ACA+ + L+ G +++
Sbjct: 226 VVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRS 285
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+ GL S++ N L+ Y C + A ++FDDM ER V+SWNV+I E
Sbjct: 286 WIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKE 345
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
A+ F +M G EP E T L +L +C LG + LGKW+H + + ++ L T+LID
Sbjct: 346 ALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLID 405
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
+YAKCG + AR +F M+ ++ +W+AMI GLA HG A++A ELFS M + I PN +T
Sbjct: 406 LYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEIT 465
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
F+G+L AC HAG+V+ G ++F M + I P HY M D+L RAG +EA + + NM
Sbjct: 466 FVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNM 525
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
+P+ + +LL A H + +G V RL ELEP V+++N YA G W+
Sbjct: 526 EVKPDGAIWGSLLGACRDHG---RVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWD 582
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLN 513
V+ +R + + G+KK+ G + +E+ +H F G + IY++LE ++ +KV
Sbjct: 583 DVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFG 642
Query: 514 F 514
F
Sbjct: 643 F 643
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 119/350 (34%), Positives = 180/350 (51%), Gaps = 32/350 (9%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
L L C S + QIHA I +GL N L +L+ F +S S +++YA S+ N + +
Sbjct: 33 LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLF-NSIEE 91
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
WN++IRG + S P A+ F+ M G++P +T+PF+LK+CA+++ +EG Q+
Sbjct: 92 PNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQI 151
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRK------------RDAC--------------- 184
A+V K G SDV+ + +L+ Y RDA
Sbjct: 152 HAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYM 211
Query: 185 ----KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
++FD+M + VVSWN +I + EA+ F M+ P+E+T++ VLSAC
Sbjct: 212 DRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSAC 271
Query: 241 TELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
+ L LG + + +RG N +L ALIDMY+KCG + AR LF M E +V +W+
Sbjct: 272 AQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWN 331
Query: 301 AMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
MI G +EAL LF M S + P +TFL +L +C H G ++ G
Sbjct: 332 VMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLG 381
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 180/513 (35%), Positives = 271/513 (52%), Gaps = 24/513 (4%)
Query: 1 MVRFPVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDA 60
M R V + H FPP L KA KL S +Q HA I GL +D
Sbjct: 95 MRRNGVIPSRHTFPP---------LLKA-----VFKLRDSNP--FQFHAHIVKFGLDSDP 138
Query: 61 QILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDM 120
+ L+ SSS +A S L + D + W +I G+ + EA+ F++M
Sbjct: 139 FVRNSLI--SGYSSSGLFDFA-SRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEM 195
Query: 121 KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG-LDSDVYTNNNLVRFYGSCRR 179
K+ G+ E T VLKA ++ + G V ++G + DV+ ++LV YG C
Sbjct: 196 KKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSC 255
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
DA KVFD+M R+VV+W +I V++ + + F +M P+E T+ VLSA
Sbjct: 256 YDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSA 315
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C +G L G+ VH +I+ +N GT LID+Y KCG + A L+F R+ E NV+TW
Sbjct: 316 CAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTW 375
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+AMI G A HGYA +A +LF M +S +SPN VTF+ VL AC H G+VE+G R F M+
Sbjct: 376 TAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKG 435
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
++P HY M D+ R G L+EA I MP +P +V AL + +H Y+
Sbjct: 436 RFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLH-KDYE-- 492
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
+G R+++L+P S ++AN Y+E W++V+ VR+ MK+ + K G SW+E+
Sbjct: 493 LGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVK 552
Query: 480 GSIHRFYSGYDSQ-VELAGIYQILETLNLHMKV 511
G + F + D + +E +Y+ L+T+ + M++
Sbjct: 553 GKLCEFIAFDDKKPLESDDLYKTLDTVGVQMRL 585
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 129/445 (28%), Positives = 208/445 (46%), Gaps = 53/445 (11%)
Query: 43 HLYQIHAQIQVSGL---QNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNN 99
HL QIH + S + + D + + L R CT ++ YAR +LC S+ + W++
Sbjct: 16 HLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCT--AATQFRYARRLLCQLQTLSIQL-WDS 72
Query: 100 LIRGYAW--SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
LI ++ + R + + M+R G+ P+ T+P +LKA ++ N Q A++ K
Sbjct: 73 LIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNP-FQFHAHIVK 131
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
GLDSD + N+L+ Y S A ++FD ++ VV+W +I V N EA+ Y
Sbjct: 132 FGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVY 191
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNCQLGTALIDMYA 276
FV+MK G +E T++ VL A ++ ++ G+ VH +E G V + +G++L+DMY
Sbjct: 192 FVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYG 251
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KC A+ +F M NV TW+A+I G Q ++ + +F M S ++PN T
Sbjct: 252 KCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSS 311
Query: 337 VLCACNHAGMVEDGYRYFH--------EMEHVHGIKPM-----------------RIH-- 369
VL AC H G + G R H E+ G + R+H
Sbjct: 312 VLSACAHVGALHRG-RRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEK 370
Query: 370 ----YHTMADILARAGHLKEAYTFIMNM---PFQPNPIVLRALLSASSIHDAKYQDGVGN 422
+ M + A G+ ++A+ M PN + A+LSA + G+
Sbjct: 371 NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA------HGGLVE 424
Query: 423 EVRRRLLELEPRGSQNLVIVANKYA 447
E RR L + +G N+ A+ YA
Sbjct: 425 EGRRLFLSM--KGRFNMEPKADHYA 447
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 158/429 (36%), Positives = 239/429 (55%), Gaps = 8/429 (1%)
Query: 91 DSVPIPWNNLIRGYAW-----SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL 145
D + +N +I G+ + EA+++F +M+ RG+KP+EFT+ +LKAC+ I
Sbjct: 286 DPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAF 345
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
G Q+ A + K L SD + N LV Y D K F + VVSW +I
Sbjct: 346 ECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGH 405
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
V+N + F ++ G +PDE T+ ++LSAC L + G+ +H I+ G
Sbjct: 406 VQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFT 465
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
+ + I MYAKCG + A + F + ++ +WS MI AQHG A+EA++LF MK S
Sbjct: 466 IIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGS 525
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
I+PN++TFLGVL AC+H G+VE+G RYF M+ HGI P H + D+L RAG L E
Sbjct: 526 GIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAE 585
Query: 386 AYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANK 445
A +FIM+ F+ +P++ R+LLSA +H A G V R++ELEP + + V++ N
Sbjct: 586 AESFIMDSGFEGDPVMWRSLLSACRVHKAT---DTGKRVAERVIELEPEAAASYVLLYNI 642
Query: 446 YAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
Y + G+ + +R MK+ G+KK G+SW+E+G +H F +G S IY LE +
Sbjct: 643 YNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEM 702
Query: 506 NLHMKVLNF 514
+K L++
Sbjct: 703 LEEIKKLDY 711
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 121/263 (46%), Gaps = 7/263 (2%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN+LI GY E + +F + + ++ +FT+ L C L G + A
Sbjct: 86 VSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHAL 145
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+T SGL V N+L+ Y C R A VF+ E VSWN +I V E
Sbjct: 146 ITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEM 205
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTE--LGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
+ VKM G + + L AC ++ GK +H ++ G L+ +GTAL+
Sbjct: 206 LRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALL 265
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ-----HGYAEEALELFSNMKNSSI 327
D YAK G + A +F M + NV ++AMI G Q +A EA+ LF M++ +
Sbjct: 266 DTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGM 325
Query: 328 SPNYVTFLGVLCACNHAGMVEDG 350
P+ TF +L AC+ E G
Sbjct: 326 KPSEFTFSSILKACSTIEAFECG 348
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 138/314 (43%), Gaps = 5/314 (1%)
Query: 124 GIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDA 183
G+ TY +++ L G ++ K+ ++ NNL+ Y C A
Sbjct: 14 GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73
Query: 184 CKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
K+FD M +R+VVSWN +I+ + + E + F + + D+ T LS C
Sbjct: 74 KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
+L LG+ +H + G L +LIDMY KCG + ARL+F +E++ +W+++I
Sbjct: 134 LDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLI 193
Query: 304 LGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC--NHAGMVEDGYRYFHEMEHVH 361
G + G +E L L M ++ N L AC N + +E G + H
Sbjct: 194 AGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECG-KMLHGCAVKL 252
Query: 362 GIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVG 421
G+ + + D A+ G L++A MP PN ++ A++ A + D
Sbjct: 253 GLDLDVVVGTALLDTYAKIGDLEDATKIFKLMP-DPNVVMYNAMI-AGFLQMETMADEFA 310
Query: 422 NEVRRRLLELEPRG 435
NE E++ RG
Sbjct: 311 NEAMYLFFEMQSRG 324
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 121/272 (44%), Gaps = 12/272 (4%)
Query: 16 KPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSS 75
KPS + KA C + C K QIHAQI LQ+D I LV +LS S
Sbjct: 326 KPSEFTFSSILKA--CSTIEAFECGK----QIHAQIFKYNLQSDEFIGNALVELYSLSGS 379
Query: 76 KNLTYARSILCNYVNDSVP-IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPF 134
+ C + + + W +LI G+ + + + +F ++ G KP EFT
Sbjct: 380 ----IEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISI 435
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
+L ACA ++ + G Q+ A K+G+ + N+ + Y C A F +
Sbjct: 436 MLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPD 495
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG-KWVH 253
+VSW+V+I+ ++ EAV F MK G P+ T L VL AC+ G + G ++
Sbjct: 496 IVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFE 555
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+ + G N + ++D+ + G + A
Sbjct: 556 IMKKDHGITPNVKHSACIVDLLGRAGRLAEAE 587
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 159/443 (35%), Positives = 240/443 (54%), Gaps = 36/443 (8%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN ++ GY + +++ +FI+M++RG+ P T +L AC+++ L G +
Sbjct: 174 VTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKY 233
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL----- 209
+ ++ ++ N L+ + +C +A VFD+M R V+SW I+T N+
Sbjct: 234 INGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVT-GFANIGQIDL 292
Query: 210 ---------------WLG------------EAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
W EA+ F +M+ +PDE TM+ +L+AC
Sbjct: 293 ARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAH 352
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
LG L LG+WV + + + +G ALIDMY KCG VG A+ +F M + +TW+AM
Sbjct: 353 LGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAM 412
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
I+GLA +G+ EEAL +FSNM +SI+P+ +T++GVLCAC HAGMVE G +F M HG
Sbjct: 413 IVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHG 472
Query: 363 IKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGN 422
IKP HY M D+L RAG L+EA+ I+NMP +PN IV +LL A +H +
Sbjct: 473 IKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHK---NVQLAE 529
Query: 423 EVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSI 482
+++LELEP V++ N YA WE + VR+ M G+KK G S +EL G++
Sbjct: 530 MAAKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNV 589
Query: 483 HRFYSGYDSQVELAGIYQILETL 505
+ F +G S + IY LE +
Sbjct: 590 YEFVAGDQSHPQSKEIYAKLENM 612
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 171/355 (48%), Gaps = 42/355 (11%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+S L+ C S L QIH+ GL +D K ++ FC S + YAR + D
Sbjct: 11 ISLLEKCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVF-----D 65
Query: 92 SVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
++P P WN +I+GY+ + P+ V +++ M IKP FT+PF+LK L
Sbjct: 66 AIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQY 125
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G + + K G DS+++ + + CR A KVFD VV+WN++++
Sbjct: 126 GKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNR 185
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNCQ 266
++ F++M+ G P+ T++++LSAC++L +L GK ++ + I G V N
Sbjct: 186 VKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIY-KYINGGIVERNLI 244
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE------------- 313
L LIDM+A CG + A+ +F M+ +V +W++++ G A G +
Sbjct: 245 LENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERD 304
Query: 314 ------------------EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
EAL LF M+ S++ P+ T + +L AC H G +E G
Sbjct: 305 YVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELG 359
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 111/255 (43%), Gaps = 37/255 (14%)
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P + W +I GY +R EA+ +F +M+ +KP EFT +L ACA + L
Sbjct: 298 DQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALE 357
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G V+ + K+ + +D + N L+ Y C A KVF +M + +W +I
Sbjct: 358 LGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLA 417
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
N EA+ F M + PDE T + VL ACT G ++E+G
Sbjct: 418 INGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAG-----------MVEKGQ----- 461
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+ I M + G + NV + M+ L + G EEA E+ NM
Sbjct: 462 --SFFISMTMQHGI------------KPNVTHYGCMVDLLGRAGRLEEAHEVIVNM---P 504
Query: 327 ISPNYVTFLGVLCAC 341
+ PN + + +L AC
Sbjct: 505 VKPNSIVWGSLLGAC 519
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 158/417 (37%), Positives = 233/417 (55%), Gaps = 3/417 (0%)
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N++IR Y S++ +V+++ M + GI P T+P VLK+ A++ G + + +
Sbjct: 111 NSMIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQ 170
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
G +S+VY + LV YG+C DA +VFD++ +R++VSWN +IT N + +
Sbjct: 171 MGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDV 230
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
F +M+ G +P E TM+ VL AC LG L+ G+W+ + LN +GTALIDMYAK
Sbjct: 231 FREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAK 290
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CG V A +F M NV+TW+ +I G A +G E AL+ FS M P+ VTFLGV
Sbjct: 291 CGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGV 350
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
LCAC H G+V +G YF M+ G++P HY M D+L RAG L EA I M QP
Sbjct: 351 LCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQP 410
Query: 398 NPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSN 457
+PI+ R LL A IH +G ++LLELEP +N V++AN YA W+KV
Sbjct: 411 DPIIWRELLGACRIHG---NIQLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGE 467
Query: 458 VRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
VR M ++K+ G S +E+ ++ F + +Y++L +N +K+ +
Sbjct: 468 VREMMDCRRVRKVPGCSSIEIDNVVYEFVVSNYIKPGFEEVYKLLADMNKKLKLAGY 524
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 158/429 (36%), Positives = 239/429 (55%), Gaps = 8/429 (1%)
Query: 91 DSVPIPWNNLIRGYAW-----SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL 145
D + +N +I G+ + EA+++F +M+ RG+KP+EFT+ +LKAC+ I
Sbjct: 207 DPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAF 266
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
G Q+ A + K L SD + N LV Y D K F + VVSW +I
Sbjct: 267 ECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGH 326
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
V+N + F ++ G +PDE T+ ++LSAC L + G+ +H I+ G
Sbjct: 327 VQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFT 386
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
+ + I MYAKCG + A + F + ++ +WS MI AQHG A+EA++LF MK S
Sbjct: 387 IIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGS 446
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
I+PN++TFLGVL AC+H G+VE+G RYF M+ HGI P H + D+L RAG L E
Sbjct: 447 GIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAE 506
Query: 386 AYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANK 445
A +FIM+ F+ +P++ R+LLSA +H A G V R++ELEP + + V++ N
Sbjct: 507 AESFIMDSGFEGDPVMWRSLLSACRVHKAT---DTGKRVAERVIELEPEAAASYVLLYNI 563
Query: 446 YAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
Y + G+ + +R MK+ G+KK G+SW+E+G +H F +G S IY LE +
Sbjct: 564 YNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEM 623
Query: 506 NLHMKVLNF 514
+K L++
Sbjct: 624 LEEIKKLDY 632
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 119/255 (46%), Gaps = 7/255 (2%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN+LI GY E + +F + + ++ +FT+ L C L G + A
Sbjct: 7 VSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHAL 66
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+T SGL V N+L+ Y C R A VF+ E VSWN +I V E
Sbjct: 67 ITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEM 126
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTE--LGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
+ VKM G + + L AC ++ GK +H ++ G L+ +GTAL+
Sbjct: 127 LRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALL 186
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ-----HGYAEEALELFSNMKNSSI 327
D YAK G + A +F M + NV ++AMI G Q +A EA+ LF M++ +
Sbjct: 187 DTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGM 246
Query: 328 SPNYVTFLGVLCACN 342
P+ TF +L AC+
Sbjct: 247 KPSEFTFSSILKACS 261
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 121/272 (44%), Gaps = 12/272 (4%)
Query: 16 KPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSS 75
KPS + KA C + C K QIHAQI LQ+D I LV +LS S
Sbjct: 247 KPSEFTFSSILKA--CSTIEAFECGK----QIHAQIFKYNLQSDEFIGNALVELYSLSGS 300
Query: 76 KNLTYARSILCNYVNDSVP-IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPF 134
+ C + + + W +LI G+ + + + +F ++ G KP EFT
Sbjct: 301 ----IEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISI 356
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
+L ACA ++ + G Q+ A K+G+ + N+ + Y C A F +
Sbjct: 357 MLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPD 416
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG-KWVH 253
+VSW+V+I+ ++ EAV F MK G P+ T L VL AC+ G + G ++
Sbjct: 417 IVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFE 476
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+ + G N + ++D+ + G + A
Sbjct: 477 IMKKDHGITPNVKHSACIVDLLGRAGRLAEAE 508
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 112/248 (45%), Gaps = 5/248 (2%)
Query: 190 MCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
M +R+VVSWN +I+ + + E + F + + D+ T LS C +L LG
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
+ +H + G L +LIDMY KCG + ARL+F +E++ +W+++I G +
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCAC--NHAGMVEDGYRYFHEMEHVHGIKPMR 367
G +E L L M ++ N L AC N + +E G + H G+
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECG-KMLHGCAVKLGLDLDV 179
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRR 427
+ + D A+ G L++A MP PN ++ A++ A + D NE
Sbjct: 180 VVGTALLDTYAKIGDLEDATKIFKLMP-DPNVVMYNAMI-AGFLQMETMADEFANEAMYL 237
Query: 428 LLELEPRG 435
E++ RG
Sbjct: 238 FFEMQSRG 245
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 151/420 (35%), Positives = 230/420 (54%), Gaps = 3/420 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I + + + + +F+ M + G++P EFTY VLKACA LN GM++
Sbjct: 443 VSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNR 502
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ KS L D + L+ Y C A K+ D + E++VVSWN II+ EA
Sbjct: 503 IIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEA 562
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
F KM ++G +PD T +L C L + LGK +H Q+I++ + + + L+DM
Sbjct: 563 QKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDM 622
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG + +L+F + + TW+AM+ G AQHG EEAL++F M+ ++ PN+ TF
Sbjct: 623 YSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATF 682
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
L VL AC H G+VE G YFH M +G+ P HY + DI+ R+G + +A I MP
Sbjct: 683 LAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMP 742
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
F+ + ++ R LLS IH V + +L+LEP S V+++N YA GMW +
Sbjct: 743 FEADAVIWRTLLSICKIHG---NVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNE 799
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
V+ +R+ M+ GLKK G SW+E+ +H F G + IY+ L+ L MK + +
Sbjct: 800 VTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGY 859
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 175/350 (50%), Gaps = 9/350 (2%)
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
NL+ A+ + + N ++ +N +I GYA SD+ EA+ +F +++ G+ E +
Sbjct: 325 NLSDAQKLFNSLPNHNLQ-SYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAF 383
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
+ACA I G EG+QV KS S++ N ++ YG C +AC VF++M R V
Sbjct: 384 RACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAV 443
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
SWN II +N + + FV M G EPDE T VL AC L+ G +H ++
Sbjct: 444 SWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRI 503
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
I+ L+ +G ALIDMY+KCG + A L R+ E V +W+A+I G + +EEA
Sbjct: 504 IKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQ 563
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
+ FS M + P+ T+ +L C + VE G + H ++ T+ D+
Sbjct: 564 KTFSKMLEMGVDPDNFTYATILDTCANLVTVELG-KQIHAQIIKKELQSDAYISSTLVDM 622
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRR 426
++ G++++ F + PN R ++ +++ Q G+G E +
Sbjct: 623 YSKCGNMQD---FQLIFEKAPN----RDFVTWNAMVCGYAQHGLGEEALK 665
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 131/255 (51%), Gaps = 4/255 (1%)
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D++P + WN+LI GY + R+ + VF+ M R G T+ VLK+C+ +
Sbjct: 132 DAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHG 191
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G+Q+ K G D DV T + L+ Y C++ + + F M E++ VSW+ II CV
Sbjct: 192 GGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCV 251
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+N L + F +M+ G ++T V +C L L LG +H ++ +
Sbjct: 252 QNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVV 311
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+GTA +DMY KC + A+ LF+ + N+ +++A+I+G A+ EAL +F ++ S
Sbjct: 312 IGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSG 371
Query: 327 ISPNYVTFLGVLCAC 341
+ + V+ G AC
Sbjct: 372 LGLDEVSLSGAFRAC 386
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 109/242 (45%), Gaps = 31/242 (12%)
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR----------- 179
T+ + + C++ L G Q A + + V+ N L++ Y C
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 180 -KRD-------------------ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
+RD A K+FD M ER VVSWN +I+ + N + + F+
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+M +G D TT VVL +C+ L + G +H ++ G + G+AL+DMYAKC
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
+ C+ F M E N +WSA+I G Q+ LELF M+ + + + TF V
Sbjct: 224 KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFR 283
Query: 340 AC 341
+C
Sbjct: 284 SC 285
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIHAQI LQ+DA I LV S N+ + I N + WN ++ GYA
Sbjct: 599 QIHAQIIKKELQSDAYISSTLVDM--YSKCGNMQDFQLIFEKAPNRDF-VTWNAMVCGYA 655
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ-VQANVTKSGLDSDV 164
EA+ +F M+ +KP T+ VL+AC + + +G+ + ++ GLD +
Sbjct: 656 QHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQL 715
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVCV--ENLWLGEAVGYFVKM 221
+ +V G + A ++ + M E V W ++++C N+ + E Y +
Sbjct: 716 EHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSI-- 773
Query: 222 KDLGFEPDETTMLVVLS 238
L EP+++ V+LS
Sbjct: 774 --LQLEPEDSAAYVLLS 788
>gi|356567054|ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 518
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 185/508 (36%), Positives = 269/508 (52%), Gaps = 83/508 (16%)
Query: 44 LYQIHAQIQVSGLQNDAQILKELVRFCTLS------SSKNLTYARSILCNYVNDSVPIP- 96
L QIHA + V+GL ++ L++LV +S +S + YA + +P P
Sbjct: 17 LKQIHALMIVNGLTSNVGFLRKLVLTTAMSMVGPNATSAVIRYALQMFAQ-----IPQPD 71
Query: 97 ---WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
WN IRG + S P AV ++ M +R +KP FT+PFVLKAC ++ +N G V
Sbjct: 72 TFMWNTYIRGSSQSHDPVHAVALYAQMDQRSVKPDNFTFPFVLKACTKLFWVNTGSAVHG 131
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD------------------------ 189
V + G S+V N L+ F+ C + A +FDD
Sbjct: 132 RVLRLGFGSNVVVRNTLLVFHAKCGDLKVATDIFDDSDKGDVVAWSALIAGYAQRGDLSV 191
Query: 190 -------MCERSVVSWNVIITVCVE----------------------NLWLG-------- 212
M +R +VSWNV+ITV + N +G
Sbjct: 192 ARKLFDEMPKRDLVSWNVMITVYTKHGEMESARRLFDEAPMKDIVSWNALIGGYVLRNLN 251
Query: 213 -EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE--RGTVLNCQLGT 269
EA+ F +M +G PDE TML +LSAC +LG+L G+ VH ++IE +G L+ LG
Sbjct: 252 REALELFDEMCGVGECPDEVTMLSLLSACADLGDLESGEKVHAKIIEMNKGK-LSTLLGN 310
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
AL+DMYAKCG +G A +F + + +V +W+++I GLA HG+AEE+L LF MK + + P
Sbjct: 311 ALVDMYAKCGNIGKAVRVFWLIRDKDVVSWNSVISGLAFHGHAEESLGLFREMKMTKVCP 370
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
+ VTF+GVL AC+HAG V++G RYFH M++ + I+P H + D+L RAG LKEA+ F
Sbjct: 371 DEVTFVGVLAACSHAGNVDEGNRYFHLMKNKYKIEPTIRHCGCVVDMLGRAGLLKEAFNF 430
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
I +M +PN IV R+LL A +H NE +LL + S + V+++N YA
Sbjct: 431 IASMKIEPNAIVWRSLLGACKVHGDVELAKRANE---QLLRMRGDQSGDYVLLSNVYASQ 487
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVE 477
G W+ NVR+ M + G+ K +G S+VE
Sbjct: 488 GEWDGAENVRKLMDDNGVTKNRGSSFVE 515
>gi|225466196|ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 169/527 (32%), Positives = 280/527 (53%), Gaps = 37/527 (7%)
Query: 18 SNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKN 77
++ S L +R+ LS L C + H+ QI + + VSG D ++ FC +S+ +
Sbjct: 3 ASVGSKYLKSSRRVLSLLDQCVTMAHIKQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGD 62
Query: 78 LTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLK 137
+++A + + + I WN ++R + P + ++ M G P +T+ F+L+
Sbjct: 63 ISHAYLLFLSLPRRTSFI-WNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQ 121
Query: 138 ACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSC------RRKRD--------- 182
ACA++S L+ G+ + A + G ++ + N L+ Y SC RR D
Sbjct: 122 ACAQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVT 181
Query: 183 ----------------ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
A ++FD+M E++ VSW+ +IT + EA+ F M+ GF
Sbjct: 182 WTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGF 241
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
P+ ++ L+AC LG L G+W+H + VL+ LGTALIDMYAKCG V A
Sbjct: 242 RPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACR 301
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
+F M + +V+ ++++I GLA HG++ A+E+F+ M+N + PN VTF+ +L AC+ G+
Sbjct: 302 VFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGL 361
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALL 406
VE+G R F M +++GI+P+ HY + D+L RAG L++A + MP +P+ VL ALL
Sbjct: 362 VEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALL 421
Query: 407 SASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
+A +H D + +G E L E V+++N YA WE V+ VR+ M+
Sbjct: 422 NACRVHGDVE----LGKETVECLAERSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEK 477
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVL 512
+KK+ G S +E+ G++ F +G S V + I +L ++ H+K L
Sbjct: 478 KVKKVPGCSLIEVDGAVFEFVAGDMSHVFMDEIVLLLLGIDKHLKSL 524
>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 178/491 (36%), Positives = 254/491 (51%), Gaps = 14/491 (2%)
Query: 6 VPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKE 65
P T P P+N + LS L C S + L Q+HA +GL ++
Sbjct: 4 APLTATPAPLLPAN-KPKSAAPQHPLLSHLPHCTSLRGLAQLHAAAVKAGLAAHPALVTR 62
Query: 66 LVRFCTLSSS--KNLTYARSILCNYVNDSVPIPWNNLIRGYA-----WSDRPREAVWVFI 118
L+ CT + +L YAR + S + +N L+RGYA S AV VF+
Sbjct: 63 LLTLCTGPGAGPAHLAYARQVFDRVTQPSDAVWYNTLLRGYARSSSSSSSSSAAAVRVFV 122
Query: 119 DMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCR 178
M G+ P +T+ +LKACA G Q A K G Y L+ Y C
Sbjct: 123 RMLEEGVAPDTYTFVSLLKACAAARAGEHGRQAHAVAVKLGAAGHDYVRPTLINMYAECG 182
Query: 179 RKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
R A F VVS+N +I V + GEA+ F +M+ G P T++ VLS
Sbjct: 183 DARAARVTFGRADGDCVVSYNAMIAAAVRSSRPGEALVLFREMQAKGLNPTPVTVISVLS 242
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
AC LG L LG+W+H + + G ++ TAL+DMYAKCG++ A +F ME +
Sbjct: 243 ACALLGALQLGRWLHDYVRKLGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGMESRDRQA 302
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
WS MI+ A HGY EA+ LF MK + P+ +TFLG+L AC+H+G+V +G RYF +M+
Sbjct: 303 WSVMIVAYANHGYGREAISLFEEMKKQGMKPDDITFLGLLYACSHSGLVSEGLRYFDDMK 362
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH-DAKYQ 417
HGI P HY + D+LAR+G L+ AY FI +P P PI+ R LLSA H D +
Sbjct: 363 D-HGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDVE-- 419
Query: 418 DGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVE 477
+G V R+LEL+ + VI +N A G WE+++ VR+ M + G+ K+ G S +E
Sbjct: 420 --LGKRVFERILELDDSHGGDYVIFSNLCANTGYWEEMNRVRKLMSDKGVVKVPGCSSIE 477
Query: 478 LGGSIHRFYSG 488
+ ++H F++G
Sbjct: 478 IDNTVHEFFAG 488
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 161/434 (37%), Positives = 241/434 (55%), Gaps = 4/434 (0%)
Query: 81 ARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACA 140
AR + + + D + WN +I+GYA + EA+ +F M G+ T+ + L AC
Sbjct: 381 ARKVF-DGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACG 439
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
E+ L+EG +V + + GL+S+V N L+ Y C+R A +VFD++ ++ VSWN
Sbjct: 440 ELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNA 499
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
+I C +N +AV F +M+ +PD T++ ++ A ++ + +W+H I
Sbjct: 500 MILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLH 559
Query: 261 TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS 320
+ + TALIDMYAKCG V AR LF+ + +V TW+AMI G HG + A+ELF
Sbjct: 560 LDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFE 619
Query: 321 NMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARA 380
MK+S PN TFL VL AC+HAG+V++G YF M+ +G++P HY TM D+L RA
Sbjct: 620 EMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRA 679
Query: 381 GHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLV 440
G L EA++FI MP +P V A+L A +H + E +R+ ELEP V
Sbjct: 680 GKLHEAWSFIQKMPMEPGISVYGAMLGACKLHK---NVELAEESAQRIFELEPEEGVYHV 736
Query: 441 IVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQ 500
++AN YA +W+ V+ VR M+ GL+K G S V+L IH FYSG + + IY
Sbjct: 737 LLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYA 796
Query: 501 ILETLNLHMKVLNF 514
L L +K + +
Sbjct: 797 RLAKLIEEIKAVGY 810
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 151/320 (47%), Gaps = 15/320 (4%)
Query: 29 RQCLSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
R S LKLC ++ L +HAQ+ GL +A L + + AR +
Sbjct: 226 RTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANM--YAKCRRPGDARRVF 283
Query: 86 CNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRR-GIKPTEFTYPFVLKACA 140
D +P + WN L+ GYA + AV + + M+ G +P T VL ACA
Sbjct: 284 -----DRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACA 338
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
+ L +V A + G D V + ++ Y C A KVFD M +R+ VSWN
Sbjct: 339 DAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNA 398
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
+I EN EA+ F +M G + + ++L L AC ELG L G+ VH L+ G
Sbjct: 399 MIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIG 458
Query: 261 TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS 320
N + ALI MY KC A +F + +W+AMILG Q+G +E+A+ LFS
Sbjct: 459 LESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFS 518
Query: 321 NMKNSSISPNYVTFLGVLCA 340
M+ ++ P+ T + ++ A
Sbjct: 519 RMQLENVKPDSFTLVSIIPA 538
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 129/268 (48%), Gaps = 3/268 (1%)
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMK-RRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
+ P + +R A R A+ F M G P T+ +LK CA + L G
Sbjct: 187 AAPDDHHARLRAAASRSDLRGALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRA 246
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
V A + GL + L Y CRR DA +VFD M R V+WN ++ N
Sbjct: 247 VHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGL 306
Query: 211 LGEAVGYFVKMKDL-GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
AVG V+M++ G PD T++ VL AC + L + VH + G + T
Sbjct: 307 AEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVST 366
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
A++D+Y KCGAV AR +F M++ N +W+AMI G A++G A EAL LF M +
Sbjct: 367 AILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDV 426
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEM 357
V+ L L AC G +++G R HE+
Sbjct: 427 TDVSVLAALHACGELGFLDEG-RRVHEL 453
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 11/187 (5%)
Query: 56 LQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVW 115
L D +L L+ + ++ ARS+ N D I WN +I GY + AV
Sbjct: 560 LDQDVYVLTALIDM--YAKCGRVSIARSLF-NSARDRHVITWNAMIHGYGSHGSGKVAVE 616
Query: 116 VFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS-GLDSDVYTNNNLVRFY 174
+F +MK G P E T+ VL AC+ ++EG + +++ + GL+ + +V
Sbjct: 617 LFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLL 676
Query: 175 GSCRRKRDACKVFDDM-CERSVVSWNVIITVCV--ENLWLGEAVGYFVKMKDLGFEPDET 231
G + +A M E + + ++ C +N+ L E + EP+E
Sbjct: 677 GRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRI----FELEPEEG 732
Query: 232 TMLVVLS 238
V+L+
Sbjct: 733 VYHVLLA 739
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/466 (34%), Positives = 254/466 (54%), Gaps = 8/466 (1%)
Query: 48 HAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWS 107
H+ + SGL D + L+ S L AR + + +++ + WN++I GY+
Sbjct: 149 HSGVLKSGLCADGHVRHSLITM--YSRCGELGCARRVF-DEISEKDLVSWNSMISGYSRM 205
Query: 108 DRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTN 167
+AV +F +M+ G +P E T +L AC ++ L G ++ V ++ +D + +
Sbjct: 206 GYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVG 265
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
+ L+ YG C A +VFD M ++ VV+WN +IT +N EA+ F M++ G
Sbjct: 266 SALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVN 325
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
PD+ T++ VLSAC +G L GKW+ ERG + + TALIDMYAKCG++ A +
Sbjct: 326 PDKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRV 385
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM--KNSSISPNYVTFLGVLCACNHAG 345
F M + N +W+AMI LA HG +E+L LF M + ++ PN ++F+GVL AC HAG
Sbjct: 386 FEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAG 445
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+V++G + F M G+ P H+ M D+LARAGH+ EA+ FI MP +P+ +VL AL
Sbjct: 446 LVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGAL 505
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
L A + V V LLE+EP S N +I + +A + W+ + +R M+
Sbjct: 506 LGACQ---KRRNVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQR 562
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
G+ K G SW+E+ +H F++G + Q++ LN MKV
Sbjct: 563 GVTKTPGCSWIEIENQVHEFHAGDVLHFISQDMCQVINLLNEEMKV 608
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 213/388 (54%), Gaps = 18/388 (4%)
Query: 30 QCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
+ LS LK C S K L QIH Q+ ++ + +L RF L N + S
Sbjct: 33 KLLSLLKQCTSTKSLQQIHTQMIINAIHKPNFLLH---RFIDLKDFNNASLLFS------ 83
Query: 90 NDSVPIP----WNNLIRGYAWS-DRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
+P P +N +IRG + + + + MK GI+P FTYPFV ACA +
Sbjct: 84 --QIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLV 141
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
LN G + V KSGL +D + ++L+ Y C A +VFD++ E+ +VSWN +I+
Sbjct: 142 LNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISG 201
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
+ G+AVG F +M+D GFEPDE T++ +L AC +LG+L LG W+ ++E LN
Sbjct: 202 YSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLN 261
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+G+ALI MY KCG + AR +F RM + +V TW+AMI G AQ+G ++EA+ LFS M+
Sbjct: 262 SFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRE 321
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
S ++P+ +T +GVL AC G ++ G ++ G++ + D+ A+ G L
Sbjct: 322 SGVNPDKITLVGVLSACASIGALDFG-KWLDTYASERGLQNDIYVSTALIDMYAKCGSLD 380
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIH 412
+A +MP Q N + A++SA + H
Sbjct: 381 DALRVFEDMP-QKNEVSWNAMISALAFH 407
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 173/513 (33%), Positives = 271/513 (52%), Gaps = 42/513 (8%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+ LK C + L +IHA I L + ++ ++V C T ++L V D
Sbjct: 18 VPILKDCPNIVELKKIHAHIVKFSLSQSSFLVTKMVDVCNHYGE---TEYANLLFKGVAD 74
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDM-----KRRGIKPTEFTYPFVLKACAEISGLN 146
+N +IR Y + A+ V+ M I P +FT+PFV+K+CA + +
Sbjct: 75 PNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYD 134
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT--- 203
G QV +V K G S+ N+LV Y C DA +VF++M ER VSWN +I+
Sbjct: 135 LGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHV 194
Query: 204 ---------VCVENL-------WLG------------EAVGYFVKMKDLGFEPDETTMLV 235
E + W +A+ +F +M+ +G EPDE +++
Sbjct: 195 RLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVS 254
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
VL C +LG L LGKW+H+ + G + N + ALI+MYAKCG++ R LF +M+E +
Sbjct: 255 VLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERD 314
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
V +WS MI+GLA HG A EA+ELF M+ + I P+ +TF+G+L AC HAG++ +G RYF
Sbjct: 315 VISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGLRYFE 374
Query: 356 EMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAK 415
M+ + I+P HY + ++L +G L +A + MP +P+ + +LLS+ H
Sbjct: 375 SMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSLLSSCRSHGNL 434
Query: 416 YQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSW 475
+ E LLELEP + N V+++N YA++G W+ VS +R+ M++ +KK G S
Sbjct: 435 KIAVIAME---HLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSS 491
Query: 476 VELGGSIHRFYSGYDSQVELAGIYQILETLNLH 508
+E+ + F SG DS+ I ++L+ L +H
Sbjct: 492 IEVDNMVQEFASGDDSKPFSKAICRVLKLLVMH 524
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 169/477 (35%), Positives = 252/477 (52%), Gaps = 9/477 (1%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S L+ C S + + QIH Q+ +G Q + + L+ + L +A I
Sbjct: 478 SILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDM--YAKLGKLDHALKIFRRLK 535
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
V + W +I GYA ++ EA+ +F +M+ +GI + + ACA I LN+G
Sbjct: 536 EKDV-VSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQ 594
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ A SG D+ N LV Y C + RDA FD + + +SWN +I+ ++
Sbjct: 595 QIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSG 654
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
EA+ F +M G E + T +SA + N+ LGK +H +I+ G ++
Sbjct: 655 HCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSN 714
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
LI +YAKCG + A F M E N +W+AM+ G +QHG+ +AL LF +MK + P
Sbjct: 715 VLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLP 774
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
N+VTF+GVL AC+H G+V++G +YF M VHG+ P HY + D+L R+G L A F
Sbjct: 775 NHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRF 834
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
+ MP QP+ +V R LLSA +H K D +G LLELEP+ S V+++N YA
Sbjct: 835 VEEMPIQPDAMVCRTLLSACIVH--KNID-IGEFAASHLLELEPKDSATYVLLSNMYAVT 891
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
G W R+ MK+ G+KK G SW+E+ S+H F++G + IY+ L LN
Sbjct: 892 GKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDLN 948
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 159/334 (47%), Gaps = 24/334 (7%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN ++ Y D E+ +F M+ GI+P +FTYP +L+ C+ + ++ G Q+
Sbjct: 439 VLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQ 498
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V K+G +VY ++ L+ Y + A K+F + E+ VVSW +I ++ EA
Sbjct: 499 VLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEA 558
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M+D G D +SAC + L+ G+ +H Q G + +G AL+ +
Sbjct: 559 LNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSL 618
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YA+CG V A F ++ + +W+++I G AQ G+ EEAL LFS M + N TF
Sbjct: 619 YARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTF 678
Query: 335 -----------LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
L HA +++ G+ E+ +V + + A+ G++
Sbjct: 679 GPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNV------------LITLYAKCGNI 726
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQ 417
+A MP + N I A+L+ S H ++
Sbjct: 727 DDAERQFFEMP-EKNEISWNAMLTGYSQHGHGFK 759
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 152/341 (44%), Gaps = 4/341 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+IHA+ G +N + L+ + L A+ + + + + W ++ G +
Sbjct: 191 KIHARTITHGYENSLFVCNPLIDL--YFKNGFLNSAKKVF-DGLQKRDSVSWVAMLSGLS 247
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
S EAV +F M G+ PT + + VL AC ++ G Q+ V K G + Y
Sbjct: 248 QSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETY 307
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N LV Y A +VF+ M +R VS+N +I+ + + +A+ F KM
Sbjct: 308 VCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDC 367
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+PD T+ +LSAC+ +G L +GK H I+ G + L AL+D+Y KC + A
Sbjct: 368 LKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAH 427
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
F E NV W+ M++ E+ ++F+ M+ I PN T+ +L C+
Sbjct: 428 EFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLR 487
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
V+ G + H G + + D+ A+ G L A
Sbjct: 488 AVDLGEQ-IHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHA 527
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 157/330 (47%), Gaps = 7/330 (2%)
Query: 89 VNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS- 143
V D +P+ WN ++ + + +F M + +KP E TY VL+ C
Sbjct: 125 VFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDV 184
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
+ ++ A G ++ ++ N L+ Y A KVFD + +R VSW +++
Sbjct: 185 PFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLS 244
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
++ EAV F +M G P VLSACT++ +G+ +H ++++G L
Sbjct: 245 GLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSL 304
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
+ AL+ +Y++ G A +F+ M + + +++++I GL+Q GY+++ALELF M
Sbjct: 305 ETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMC 364
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+ P+ VT +L AC+ G + G + FH G+ I + D+ + +
Sbjct: 365 LDCLKPDCVTVASLLSACSSVGALLVG-KQFHSYAIKAGMSSDIILEGALLDLYVKCSDI 423
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHD 413
K A+ F ++ + N ++ +L A + D
Sbjct: 424 KTAHEFFLSTETE-NVVLWNVMLVAYGLLD 452
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 125/270 (46%), Gaps = 12/270 (4%)
Query: 98 NNLIRGYAWSDRPREAVWV-FID-MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANV 155
+N YA+S+ EA + F+ M+ RG++ TY ++L C ++G ++ +
Sbjct: 35 HNTALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKI 94
Query: 156 TKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
K G ++V L+ Y + A VFD+M R + WN ++ V G +
Sbjct: 95 LKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVL 154
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG--KWVHLQLIERGTVLNCQLGTALID 273
G F +M +PDE T VL C G++ + +H + I G + + LID
Sbjct: 155 GLFRRMLQEKVKPDERTYAGVLRGCGG-GDVPFHCVEKIHARTITHGYENSLFVCNPLID 213
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
+Y K G + A+ +F +++ + +W AM+ GL+Q G EEA+ LF M S + P
Sbjct: 214 LYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYI 273
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
F VL AC + G E +HG+
Sbjct: 274 FSSVLSACTKVEFYKVG-------EQLHGL 296
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 69/177 (38%), Gaps = 2/177 (1%)
Query: 212 GEAVG--YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
GEA G + M++ G + T L +L C G S G +H ++++ G L
Sbjct: 48 GEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCE 107
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
L+D+Y G + A +F M + W+ ++ A L LF M + P
Sbjct: 108 RLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKP 167
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+ T+ GVL C + H HG + + + D+ + G L A
Sbjct: 168 DERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSA 224
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 166/444 (37%), Positives = 241/444 (54%), Gaps = 5/444 (1%)
Query: 73 SSSKNLTYARSIL-CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFT 131
S +L ARS+ N++N V PWN +I GY+ S +EA+ +++ M + GI +T
Sbjct: 368 SKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYT 427
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT-NNNLVRFYGSCRRKRDACKVFDDM 190
Y V A A L G V V K GLD V + NN + Y C D KVFD M
Sbjct: 428 YCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRM 487
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
ER +VSW ++T ++ EA+ F M++ GF P++ T VL +C L L G+
Sbjct: 488 EERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGR 547
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
VH L + G + +ALIDMYAKCG++ A +F ++ ++ +W+A+I G AQHG
Sbjct: 548 QVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHG 607
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
E+AL+LF M+ S I N VT L VL AC+H GMVE+G YF +ME +G+ P HY
Sbjct: 608 LVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHY 667
Query: 371 HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLE 430
+ D+L R G L +A FI MP +PN +V + LL +H +G R++L
Sbjct: 668 ACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHG---NVELGEIAARKILS 724
Query: 431 LEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYD 490
+ P S V+++N Y E G +E ++R MK+ G+KK G SW+ + G +H+FYSG
Sbjct: 725 IRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQ 784
Query: 491 SQVELAGIYQILETLNLHMKVLNF 514
+ IY LE L +K + +
Sbjct: 785 QHPQKKEIYVKLEELREKIKAMGY 808
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 164/342 (47%), Gaps = 15/342 (4%)
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D +P W +I G + F +M GI P +F Y ++++C +
Sbjct: 177 VFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDS 236
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L G V A + G + ++ + +L+ Y D+ VF+ M E + VSWN +I+
Sbjct: 237 LELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISG 296
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
C N EA FV+MK+ P+ T++ V A +L ++++GK V E G N
Sbjct: 297 CTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGN 356
Query: 265 CQLGTALIDMYAKCGAVGCARLLF-SRMEEINVWT-WSAMILGLAQHGYAEEALELFSNM 322
+GTALIDMY+KCG++ AR +F + V T W+AMI G +Q G ++EALEL+ M
Sbjct: 357 VLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQM 416
Query: 323 KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY-HTMADILARAG 381
+ I+ + T+ V A + ++ G R H M G+ M + + +AD ++ G
Sbjct: 417 CQNGITSDLYTYCSVFNAIAASKSLQFG-RVVHGMVLKCGLDLMVVSVNNAIADAYSKCG 475
Query: 382 HLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNE 423
L++ M R ++S +++ A Q +G E
Sbjct: 476 FLEDVRKVFDRME-------ERDIVSWTTLVTAYSQSSLGEE 510
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 110/205 (53%), Gaps = 2/205 (0%)
Query: 135 VLKACAEISGLNEGMQVQANVTKSGL-DSDVYT-NNNLVRFYGSCRRKRDACKVFDDMCE 192
VL+ CAE + E V V KS D D+ N+ Y C R AC VFD+M +
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 183
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
R+V SW V+I E+ + +F +M + G PD+ ++ +C L +L LGK V
Sbjct: 184 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 243
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H Q++ RG + + T+L++MYAK G++ + +F+ M E N +W+AMI G +G
Sbjct: 244 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLH 303
Query: 313 EEALELFSNMKNSSISPNYVTFLGV 337
EA +LF MKN + +PN T + V
Sbjct: 304 LEAFDLFVRMKNGACTPNMYTLVSV 328
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 164/375 (43%), Gaps = 20/375 (5%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+HAQI + G + L+ S +Y + N + + + WN +I G
Sbjct: 243 VHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYW---VFNMMTEHNQVSWNAMISGCTS 299
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+ EA +F+ MK P +T V KA ++ +N G +VQ ++ G++ +V
Sbjct: 300 NGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLV 359
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVS--WNVIITVCVENLWLGEAVGYFVKMKDL 224
L+ Y C DA VFD V+ WN +I+ ++ EA+ +V+M
Sbjct: 360 GTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQN 419
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL-------GTALIDMYAK 277
G D T V +A +L G+ VH G VL C L A+ D Y+K
Sbjct: 420 GITSDLYTYCSVFNAIAASKSLQFGRVVH------GMVLKCGLDLMVVSVNNAIADAYSK 473
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CG + R +F RMEE ++ +W+ ++ +Q EEAL F M+ +PN TF V
Sbjct: 474 CGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSV 533
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
L +C +E G R H + G+ + + D+ A+ G + EA + + P
Sbjct: 534 LISCASLCFLEYG-RQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGK-VFDKISNP 591
Query: 398 NPIVLRALLSASSIH 412
+ + A++S + H
Sbjct: 592 DIVSWTAIISGYAQH 606
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 85/181 (46%), Gaps = 6/181 (3%)
Query: 233 MLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL---IDMYAKCGAVGCARLLFS 289
++ VL C E G++ K VH L+ + + L +Y+KC A +F
Sbjct: 121 LIDVLRDCAEKGSIREAKAVH-GLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFD 179
Query: 290 RMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVED 349
M + NV++W+ MI+G +HG + + F M NS I P+ + ++ +C +E
Sbjct: 180 EMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLEL 239
Query: 350 GYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSAS 409
G + H + G ++ ++ A+ G ++++Y ++ NM + N + A++S
Sbjct: 240 G-KMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSY-WVFNMMTEHNQVSWNAMISGC 297
Query: 410 S 410
+
Sbjct: 298 T 298
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 171/480 (35%), Positives = 256/480 (53%), Gaps = 9/480 (1%)
Query: 34 FLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
LK+C + L QIHA I G + + L+ ++ + AR +
Sbjct: 130 ILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHM--YANCGEVEVARRVFDEMSE 187
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
+V WN++ GY S E V +F +M I+ E T VL AC ++ L G
Sbjct: 188 RNVRT-WNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEW 246
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+ V + GL + +LV Y C + A ++FD M R VV+W+ +I+ +
Sbjct: 247 INRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASR 306
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
EA+ F +M+ +P+E TM+ +LS+C LG L GKWVH + ++ L LGTA
Sbjct: 307 CREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTA 366
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
L+D YAKCG+V + +F +M NV +W+ +I GLA +G ++ALE F M ++ PN
Sbjct: 367 LMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPN 426
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
VTF+GVL AC+HAG+V++G F M GI+P HY M DIL RAG ++EA+ FI
Sbjct: 427 DVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFI 486
Query: 391 MNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVG 450
NMP QPN ++ R LL++ +H +G E ++L+ LEP S + ++++N YA VG
Sbjct: 487 KNMPIQPNAVIWRTLLASCKVHK---NVEIGEESLKQLIILEPTHSGDYILLSNIYASVG 543
Query: 451 MWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
WE VR MK G+KK G S +EL G IH F++ + + IY +E + +K
Sbjct: 544 RWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIK 603
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/363 (32%), Positives = 191/363 (52%), Gaps = 2/363 (0%)
Query: 34 FLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSV 93
L+ C + + L +IHA + + L ++ + L+ + ++ YA SI
Sbjct: 30 ILEQCKTIRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDS 89
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
P +N +IRG+ P EA+ +F +M ++P EFT+P +LK C+ + L+EG Q+ A
Sbjct: 90 P-AYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHA 148
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+ K G S + N L+ Y +C A +VFD+M ER+V +WN + ++ E
Sbjct: 149 LIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEE 208
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
V F +M +L DE T++ VL+AC L +L LG+W++ + E+G N L T+L+D
Sbjct: 209 VVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVD 268
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MYAKCG V AR LF +M+ +V WSAMI G +Q EAL+LF M+ ++I PN +T
Sbjct: 269 MYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEIT 328
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
+ +L +C G +E G ++ H +K + D A+ G ++ + M
Sbjct: 329 MVSILSSCAVLGALETG-KWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKM 387
Query: 394 PFQ 396
P +
Sbjct: 388 PVK 390
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 153/393 (38%), Positives = 218/393 (55%), Gaps = 4/393 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I G+A+ +EA+ F M+ +G+ P E T +L AC S L +GMQV
Sbjct: 333 VAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGY 392
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVCVENLWLGE 213
+ K GLD DV N L+ Y C RDA F++M C +VSWN I+T C+ + E
Sbjct: 393 INKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEE 452
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
M PD T+ VL A E ++ +G VH ++ G + + LID
Sbjct: 453 VFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLID 512
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
+YAKCG++ A +F M +V +WS++ILG AQ GY EEAL+LF M+ + PN+VT
Sbjct: 513 LYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVT 572
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
F+GVL AC+H G+VE+G++ + ME GI P R H M D+LARAG L EA FI M
Sbjct: 573 FVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQM 632
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
F P+ +V + LL+A H VG +L+++P S V++ N YA G WE
Sbjct: 633 AFDPDIVVWKTLLAACKTHG---NVDVGKRAAENILKIDPSNSAAHVLLCNIYASKGNWE 689
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFY 486
V+ +R MK G++K+ G SW+E+ IH F+
Sbjct: 690 DVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFF 722
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 200/423 (47%), Gaps = 37/423 (8%)
Query: 18 SNCNSDLLSKARQCLSFLK----LCCS-KKHLYQIHAQIQVSGLQNDAQILKELVRFCTL 72
S C L ++A + FL+ C + + Y I A + L++ +I +++
Sbjct: 36 SLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHMLKS--- 92
Query: 73 SSSKNLTYARSILCNY-----------VNDSVP----IPWNNLIRGYAWSDRPREAVWVF 117
S +LT IL Y V D++P + W ++I GY+ + + A+ +
Sbjct: 93 KSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFY 152
Query: 118 IDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSC 177
M + G+ P +FT+ ++KAC+ + + G Q+ A+V KS + + N L+ Y
Sbjct: 153 FQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKS 212
Query: 178 RRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG-FEPDETTMLVV 236
DA VF M R ++SW +I + + EA+ YF +M G + P+E V
Sbjct: 213 NLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSV 272
Query: 237 LSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINV 296
SAC+ L G+ +H I+ G + G +L DMYAKCG + CAR++F ++ ++
Sbjct: 273 FSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDL 332
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
W+A+I G A G A+EA+ FS M++ + P+ +T +LCAC + G +
Sbjct: 333 VAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQ---- 388
Query: 357 MEHVHG-IKPMRIHY-----HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASS 410
VHG I M + +T+ + A+ L++A F M + + A+L+A
Sbjct: 389 ---VHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACM 445
Query: 411 IHD 413
HD
Sbjct: 446 RHD 448
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKM-KDLGFEPDETTMLVVLSACTELGNLSLGKW 251
R+ S N IT + EA+ F + K GF +T ++SAC+ L +L GK
Sbjct: 25 RAEQSSNEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKK 84
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+H +++ + + L +++MY KC ++ A+ +F M E NV +W+++I G +Q+G
Sbjct: 85 IHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQ 144
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIK 364
ALE + M S + P+ TF ++ AC+ G + G + H H +K
Sbjct: 145 GGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQL-----HAHVLK 192
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 171/428 (39%), Positives = 243/428 (56%), Gaps = 14/428 (3%)
Query: 97 WNNLIRGY----AWSDRPREA-VWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
WN LIR + A P + + +F+ M+ G++P T+PF+L++ A S L+ G V
Sbjct: 27 WNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSV 86
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
A + + GL D + +L+ Y S A +F M ER+V+SW+ +I V
Sbjct: 87 HAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQY 146
Query: 212 GEAVGYFVKMKDLGF---EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
EA+ F +M+ LG P+E TM VL+AC LG L GKW H + + G ++ LG
Sbjct: 147 KEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLG 206
Query: 269 TALIDMYAKCGAVGCARLLFSRM-EEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
TALIDMYAKCG+V A +FS + +V WSAMI GLA HG AEE + LFS M N +
Sbjct: 207 TALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGV 266
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
PN VTFL V CAC H G+V +G Y M + I P HY M D+ RAG +KEA+
Sbjct: 267 RPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAW 326
Query: 388 TFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVR-RRLLELEPRGSQNLVIVANKY 446
+ +MP +P+ +V ALLS S +H D E+ ++L+ELEP S V+++N Y
Sbjct: 327 NVVKSMPMEPDVLVWGALLSGSRMHG----DIETCELALKKLIELEPTNSGAYVLLSNVY 382
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
A+ G WE V +VR M+ +G+KK+ G S +E+GG +H F+ G DS E I+ +LE +
Sbjct: 383 AKRGRWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEIL 442
Query: 507 LHMKVLNF 514
+KV +
Sbjct: 443 ERLKVEGY 450
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 127/274 (46%), Gaps = 9/274 (3%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+HAQI GL D + L+ SSS + AR++ +V I W+ +I GY
Sbjct: 85 SVHAQILRFGLAIDPFVQTSLISM--YSSSGLVDMARNLFAVMPERNV-ISWSCMINGYV 141
Query: 106 WSDRPREAVWVFIDMKRRG---IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
+ +EA+ +F +M+ G ++P EFT VL AC + L G A + K G+
Sbjct: 142 RCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPV 201
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMC-ERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
DV L+ Y C A VF ++ + V++W+ +I+ + E VG F KM
Sbjct: 202 DVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKM 261
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQLGTALIDMYAKCGA 280
+ G P+ T L V AC G +S GK ++ E +++ Q ++D+Y + G
Sbjct: 262 INQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGR 321
Query: 281 VGCARLLFSRME-EINVWTWSAMILGLAQHGYAE 313
+ A + M E +V W A++ G HG E
Sbjct: 322 IKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIE 355
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 150/416 (36%), Positives = 228/416 (54%), Gaps = 3/416 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I + + + + +F+ M + G++P EFTY VLKACA LN GM++
Sbjct: 380 VSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNR 439
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ KS + D + L+ Y C A K+ D + E++VVSWN II+ EA
Sbjct: 440 IIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEA 499
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
F KM ++G +PD T +L C L + LGK +H Q+I++ + + + L+DM
Sbjct: 500 QKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDM 559
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG + +L+F + + TW+AM+ G AQHG EEAL++F M+ ++ PN+ TF
Sbjct: 560 YSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATF 619
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
L VL AC H G+VE G YFH M +G+ P HY + DI+ R+G + +A I MP
Sbjct: 620 LAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMP 679
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
F+ + ++ R LLS IH V + +L+LEP S V+++N YA GMW +
Sbjct: 680 FEADAVIWRTLLSXCKIHGNVE---VAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNE 736
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
V+ +R+ M+ GLKK G SW+E+ +H F G + IY+ L+ L MK
Sbjct: 737 VTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMK 792
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 173/350 (49%), Gaps = 8/350 (2%)
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
NL+ + L N + + +N +I GYA SD+ EA+ +F +++ G+ E +
Sbjct: 261 NLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAX 320
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
+ACA I G EG+QV KS S++ N ++ YG C +AC VF++M R V
Sbjct: 321 RACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAV 380
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
SWN II +N + + FV M G EPDE T VL AC L+ G +H ++
Sbjct: 381 SWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRI 440
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
I+ L+ +G ALIDMY+KCG + A L R+ E V +W+A+I G + +EEA
Sbjct: 441 IKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQ 500
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
+ FS M + P+ T+ +L C + VE G + H ++ T+ D+
Sbjct: 501 KTFSKMLEMGVDPDNFTYATILDTCANLVTVELG-KQIHAQIIKKELQSDAYISSTLVDM 559
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRR 426
++ G++++ F + PN R ++ +++ Q G+G E +
Sbjct: 560 YSKCGNMQD---FQLIFEKAPN----RDFVTWNAMVCGYAQHGLGEEALK 602
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 123/326 (37%), Gaps = 73/326 (22%)
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEF-------------- 130
V D +P + WN ++ GYA A +F M G E
Sbjct: 99 VFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDR 158
Query: 131 -TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRD----ACK 185
T+ VLK+C+ + G+Q+ K G D DV T + L+ Y C + D +
Sbjct: 159 TTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLE 218
Query: 186 VFDDMCERSV-------------VSWNVIITVCVENLWLG-------------------- 212
+F +M + V +V+I ++++
Sbjct: 219 LFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNL 278
Query: 213 -----------------EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQ 255
EA+G F ++ G DE ++ AC + G VH
Sbjct: 279 QSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGL 338
Query: 256 LIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEA 315
++ N + A++DMY KCGA+ A L+F M + +W+A+I Q+G E+
Sbjct: 339 SMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKT 398
Query: 316 LELFSNMKNSSISPNYVTFLGVLCAC 341
L LF M S + P+ T+ VL AC
Sbjct: 399 LSLFVWMLQSGMEPDEFTYGSVLKAC 424
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 109/280 (38%), Gaps = 69/280 (24%)
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
T+ + + C++ L G Q A + + V+ N L++ Y C A KVFD M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYF---------------VKMKDLGFEPDETTMLV 235
+R VSWN ++ +G A F +M +G D TT V
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAV 163
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC----------------- 278
VL +C+ L + G +H ++ G + G+AL+DMYAKC
Sbjct: 164 VLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEM 223
Query: 279 -----GA-----------------VGCARL---------------LFSRMEEINVWTWSA 301
GA +G A L LF+ + N+ +++A
Sbjct: 224 QKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNA 283
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
+I+G A+ EAL +F ++ S + + V+ G AC
Sbjct: 284 IIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRAC 323
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIHAQI LQ+DA I LV S N+ + I N + WN ++ GYA
Sbjct: 536 QIHAQIIKKELQSDAYISSTLVDM--YSKCGNMQDFQLIFEKAPNRDF-VTWNAMVCGYA 592
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ-VQANVTKSGLDSDV 164
EA+ +F M+ +KP T+ VL+AC + + +G+ + ++ GLD +
Sbjct: 593 QHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQL 652
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVCV--ENLWLGEAVGYFVKM 221
+ +V G + A ++ + M E V W +++ C N+ + E Y +
Sbjct: 653 EHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSI-- 710
Query: 222 KDLGFEPDETTMLVVLS 238
L EP+++ V+LS
Sbjct: 711 --LQLEPEDSAAYVLLS 725
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/420 (38%), Positives = 231/420 (55%), Gaps = 4/420 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I G A + EA F+ M G PT T VL ACA + L G V
Sbjct: 313 VSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKL 372
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ K LDS+V N+L+ Y C+R A +F+++ E++ V+WN +I +N + EA
Sbjct: 373 LDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNL-EKTNVTWNAMILGYAQNGCVKEA 431
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F M+ G + D T++ V++A + KW+H + N + TAL+DM
Sbjct: 432 LNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDM 491
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCGA+ AR LF M+E +V TW+AMI G HG +E L+LF+ M+ ++ PN +TF
Sbjct: 492 YAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITF 551
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
L V+ AC+H+G VE+G F M+ + ++P HY M D+L RAG L +A+ FI MP
Sbjct: 552 LSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMP 611
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
+P VL A+L A IH +G + ++L +L+P V++AN YA MW+K
Sbjct: 612 IKPGISVLGAMLGACKIHK---NVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDK 668
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
V+ VR M++ GL K G SWVEL IH FYSG + E IY LETL +K +
Sbjct: 669 VAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKAAGY 728
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 165/339 (48%), Gaps = 11/339 (3%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W L+ GYA + + A+ + + M+ G KP T +L A A++ L G +
Sbjct: 212 VSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGY 271
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+SG +S V N L+ Y C R A VF M ++VVSWN +I C +N EA
Sbjct: 272 AFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEA 331
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
F+KM D G P TM+ VL AC LG+L G +VH L + N + +LI M
Sbjct: 332 FATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISM 391
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KC V A +F+ +E+ NV TW+AMILG AQ+G +EAL LF M++ I + T
Sbjct: 392 YSKCKRVDIAASIFNNLEKTNV-TWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTL 450
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT-MADILARAGHLKEAYTFIMNM 393
+GV+ A V ++ H + V + T + D+ A+ G +K A + +M
Sbjct: 451 VGVITALADFS-VNRQAKWIHGLA-VRACMDNNVFVSTALVDMYAKCGAIKTARK-LFDM 507
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELE 432
+ + I A++ H GVG E E++
Sbjct: 508 MQERHVITWNAMIDGYGTH------GVGKETLDLFNEMQ 540
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 167/325 (51%), Gaps = 6/325 (1%)
Query: 34 FLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILCNYVNDS 92
L+ C SKK LYQI I +G N+ +++ FC S N AR + +V
Sbjct: 53 LLENCTSKKELYQILPFIIKNGFYNEHLFQTKVISLFCKFGS--NSEAAR--VFEHVELK 108
Query: 93 VPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQ 152
+ + ++ +++GYA + +A+ F+ M ++ Y +L+ C E L +G ++
Sbjct: 109 LDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIH 168
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
+ +G +S+++ ++ Y CR+ +A K+F+ M + +VSW ++ +N
Sbjct: 169 GLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAK 228
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
A+ ++M++ G +PD T++ +L A ++ L +G+ +H G + AL+
Sbjct: 229 RALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALL 288
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
DMY KCG+ ARL+F M V +W+ MI G AQ+G +EEA F M + P V
Sbjct: 289 DMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRV 348
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEM 357
T +GVL AC + G +E G+ + H++
Sbjct: 349 TMMGVLLACANLGDLERGW-FVHKL 372
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/425 (38%), Positives = 240/425 (56%), Gaps = 15/425 (3%)
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRR-GIKPTEFTYPFVLKACAEIS 143
V D +P + WN++I GYA + REAV VF +M RR G +P E + +L AC E+
Sbjct: 179 VFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELG 238
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
L G V+ V + G+ + Y + L+ Y C A ++FD M R V++WN +I+
Sbjct: 239 DLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVIS 298
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
+N EA+ F MK+ ++ T+ VLSAC +G L LGK + +RG
Sbjct: 299 GYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQH 358
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
+ + TALIDMYAK G++ A+ +F M + N +W+AMI LA HG A+EAL LF +M
Sbjct: 359 DIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMS 418
Query: 324 N--SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAG 381
+ PN +TF+G+L AC HAG+V++GYR F M + G+ P HY M D+LARAG
Sbjct: 419 DEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAG 478
Query: 382 HLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVI 441
HL EA+ I MP +P+ + L ALL A +K +G V R +LE++P S N +I
Sbjct: 479 HLYEAWDLIRKMPEKPDKVTLGALLGACR---SKKNVDIGERVMRMILEVDPSNSGNYII 535
Query: 442 VANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG----YDSQVELAG 497
+ YA + MWE + +R M+ G+ K G SW+E+ +H F++G DS ++L+
Sbjct: 536 SSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHLHEFHAGDGLCLDS-IDLSN 594
Query: 498 IYQIL 502
I +L
Sbjct: 595 IIDLL 599
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 132/389 (33%), Positives = 200/389 (51%), Gaps = 15/389 (3%)
Query: 30 QCLSFL-KLCCSKKHLYQIHAQIQVSGLQN--DAQILKELVRFCTLSSSKNLTYARSILC 86
+CL FL K C S K L Q+H Q+ V+ + + +L + + KN Y+ +
Sbjct: 25 ECLVFLAKQCSSTKTLQQVHTQMVVNSSIHTPNNHLLSKAIHL------KNFPYSSLLFS 78
Query: 87 NYVNDSVPIPWNNLIRGYA--WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
+ +N +IR W + P A+ +F M + P FT+PF +CA ++
Sbjct: 79 HIAPHPNDYAFNIMIRALTTTWHNYPL-ALSLFHRMMSLSLTPDNFTFPFFFLSCANLAS 137
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L+ + + K L SD +T ++L+ Y C A KVFD++ R VSWN +I
Sbjct: 138 LSHACAAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAG 197
Query: 205 CVENLWLGEAVGYFVKM-KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
+ EAV F +M + GFEPDE +++ +L AC ELG+L LG+WV ++ERG L
Sbjct: 198 YAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTL 257
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
N +G+ALI MYAKCG + AR +F M +V TW+A+I G AQ+G A+EA+ LF MK
Sbjct: 258 NSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMK 317
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
++ N +T VL AC G ++ G + E G + + D+ A++G L
Sbjct: 318 EDCVTANKITLTAVLSACATIGALDLG-KQIDEYASQRGFQHDIFVATALIDMYAKSGSL 376
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIH 412
A +MP Q N A++SA + H
Sbjct: 377 DNAQRVFKDMP-QKNEASWNAMISALAAH 404
>gi|224143723|ref|XP_002325053.1| predicted protein [Populus trichocarpa]
gi|222866487|gb|EEF03618.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 189/507 (37%), Positives = 265/507 (52%), Gaps = 19/507 (3%)
Query: 12 IFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCT 71
I P P S + L L C L QIHA S L N + L R
Sbjct: 6 IQSPPPQIVTSKPTNHYNLLLQHLNECKDMSQLKQIHALSLRSTLPNHSTTLFLYSRILH 65
Query: 72 LSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDR---PREAVWVFIDMKRRGIK-P 127
SS +L YA + + V++ WN LIR A S REA+ ++ M +R P
Sbjct: 66 FSSLHDLNYAYRVF-DQVDNPNSFMWNILIRACAQSQSVHLKREAILLYNTMLQRSSPFP 124
Query: 128 TEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVF 187
T+PFVLKACA + L EG Q A++ K G SDVY NN+L+ FY SC A VF
Sbjct: 125 DNHTFPFVLKACAYLFALFEGKQAHAHLLKLGFQSDVYINNSLIHFYASCGSLESAKNVF 184
Query: 188 DDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLS 247
D M +RS+VSWN +I V A+ FV+ + FEPD T+ V++AC L LS
Sbjct: 185 DKMPQRSLVSWNAMIDAFVLFGEFETALQLFVQFQQQFFEPDGYTIQSVINACAGLCALS 244
Query: 248 LGKWVHLQL-------IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
LG W H L + R VL + +L+DMY KCG++ A +F M++ +V +W+
Sbjct: 245 LGMWAHAFLLRNCGVSVARDHVL---VNNSLLDMYCKCGSLDIATQIFEGMQKHDVTSWN 301
Query: 301 AMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+MILG A HG E ALE F M + S PN +TF+GVL ACNH MV +G +YF M +
Sbjct: 302 SMILGFAMHGKGELALECFERMIRISRFVPNSITFVGVLSACNHRYMVNEGRKYFDMMVN 361
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
+ I+P HY + DILARAG + EA + +MP +P+ ++ R+LL + +A +
Sbjct: 362 EYKIEPQLEHYGCLVDILARAGLIDEALELVASMPMKPDVVIWRSLLDSCCKKNASVE-- 419
Query: 420 VGNEVRRRLLELEPRGSQNL-VIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVEL 478
+ + R++LE E S + V+++ YA W V VR+ M N G+ K G S +E+
Sbjct: 420 LSENIARQILESEEADSSGVYVLLSRVYASASRWNDVGLVRKLMTNNGILKEPGCSLIEV 479
Query: 479 GGSIHRFYSGYDSQVELAGIYQILETL 505
G H F++G S + IYQ+L +
Sbjct: 480 DGVTHEFFAGDTSHPQTKEIYQVLNVV 506
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 175/473 (36%), Positives = 246/473 (52%), Gaps = 26/473 (5%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCT---LSSSKNLTYARSILCNY 88
L +L C + + L Q+HA SGLQ + L+ CT + L+YAR +
Sbjct: 35 LPYLPQCTTLRALAQLHAAAVKSGLQAHPAFVTRLLTLCTDQGAAKPAQLSYARQVF--- 91
Query: 89 VNDSVPIP-----WNNLIRGYA-----WSDRP--REAVWVFIDMKRRGIKPTEFTYPFVL 136
D +P P +N L+RGYA RP EA VF+ M G+ P +T+ +L
Sbjct: 92 --DRIPGPGDVVWYNTLLRGYARCSAAGGARPPAEEAARVFVRMLEEGVAPDTYTFVSLL 149
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
KACA EG Q K G Y L+ Y C R A +F + VV
Sbjct: 150 KACAAARAGEEGRQAHGVAVKVGAAEHEYVLPTLINMYAECGDARAARTMFGRVDGECVV 209
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
S+N +IT V + GEA+ F +M+ G + T++ VLSAC LG L LG+W+H +
Sbjct: 210 SYNAMITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACALLGALELGRWIHEYV 269
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
+ ++ TALIDMY KCG++ A +F ME + WS MI+ A H Y EA+
Sbjct: 270 RKVQLDSLVKVNTALIDMYGKCGSLEDAISVFQGMESRDRQAWSVMIVAYANHSYGREAI 329
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
LF MK I P+ VTFLGVL AC+H+G+V +G +YF M G+ P HY +AD+
Sbjct: 330 SLFEEMKKQGIKPDDVTFLGVLYACSHSGLVSEGLQYFDSMREF-GLVPGIKHYGCVADL 388
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALLSA-SSIHDAKYQDGVGNEVRRRLLELEPRG 435
LAR+G L AY FI +P +P I+ R LLSA S DA +G +V R+LEL+
Sbjct: 389 LARSGQLDRAYEFIDELPIKPTAILWRTLLSACGSRGDAD----LGKQVFERILELDDSH 444
Query: 436 SQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
+ VI +N A G WE+++ VR+ M G+ K+ G S +E+ +H F++G
Sbjct: 445 GGDYVIFSNLCANTGRWEEMNRVRKLMNEKGVVKVPGCSSIEVDNRVHEFFAG 497
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 166/442 (37%), Positives = 240/442 (54%), Gaps = 5/442 (1%)
Query: 73 SSSKNLTYARSIL-CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFT 131
S +L ARS+ N++N V PWN +I GY+ S +EA+ +++ M + GI +T
Sbjct: 314 SKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYT 373
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT-NNNLVRFYGSCRRKRDACKVFDDM 190
Y V A A L G V V K GLD V + NN + Y C D KVFD M
Sbjct: 374 YCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRM 433
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
ER +VSW ++T ++ EA+ F M++ GF P++ T VL +C L L G+
Sbjct: 434 EERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGR 493
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
VH L + G + +ALIDMYAKCG++ A +F ++ ++ +W+A+I G AQHG
Sbjct: 494 QVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHG 553
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
E+AL+LF M+ S I N VT L VL AC+H GMVE+G YF +ME +G+ P HY
Sbjct: 554 LVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHY 613
Query: 371 HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLE 430
+ D+L R G L +A FI MP +PN +V + LL +H +G R++L
Sbjct: 614 ACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHG---NVELGEIAARKILS 670
Query: 431 LEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYD 490
+ P S V+++N Y E G +E ++R MK+ G+KK G SW+ + G +H+FYSG
Sbjct: 671 IRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQ 730
Query: 491 SQVELAGIYQILETLNLHMKVL 512
+ IY LE L +K +
Sbjct: 731 QHPQKKEIYVKLEELREKIKAM 752
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 164/342 (47%), Gaps = 15/342 (4%)
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D +P W +I G + F +M GI P +F Y ++++C +
Sbjct: 123 VFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDS 182
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L G V A + G + ++ + +L+ Y D+ VF+ M E + VSWN +I+
Sbjct: 183 LELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISG 242
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
C N EA FV+MK+ P+ T++ V A +L ++++GK V E G N
Sbjct: 243 CTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGN 302
Query: 265 CQLGTALIDMYAKCGAVGCARLLF-SRMEEINVWT-WSAMILGLAQHGYAEEALELFSNM 322
+GTALIDMY+KCG++ AR +F + V T W+AMI G +Q G ++EALEL+ M
Sbjct: 303 VLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQM 362
Query: 323 KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY-HTMADILARAG 381
+ I+ + T+ V A + ++ G R H M G+ M + + +AD ++ G
Sbjct: 363 CQNGITSDLYTYCSVFNAIAASKSLQFG-RVVHGMVLKCGLDLMVVSVNNAIADAYSKCG 421
Query: 382 HLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNE 423
L++ M R ++S +++ A Q +G E
Sbjct: 422 FLEDVRKVFDRME-------ERDIVSWTTLVTAYSQSSLGEE 456
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 110/205 (53%), Gaps = 2/205 (0%)
Query: 135 VLKACAEISGLNEGMQVQANVTKSGL-DSDVYT-NNNLVRFYGSCRRKRDACKVFDDMCE 192
VL+ CAE + E V V KS D D+ N+ Y C R AC VFD+M +
Sbjct: 70 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 129
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
R+V SW V+I E+ + +F +M + G PD+ ++ +C L +L LGK V
Sbjct: 130 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 189
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H Q++ RG + + T+L++MYAK G++ + +F+ M E N +W+AMI G +G
Sbjct: 190 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLH 249
Query: 313 EEALELFSNMKNSSISPNYVTFLGV 337
EA +LF MKN + +PN T + V
Sbjct: 250 LEAFDLFVRMKNGACTPNMYTLVSV 274
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 164/375 (43%), Gaps = 20/375 (5%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+HAQI + G + L+ S +Y + N + + + WN +I G
Sbjct: 189 VHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYW---VFNMMTEHNQVSWNAMISGCTS 245
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+ EA +F+ MK P +T V KA ++ +N G +VQ ++ G++ +V
Sbjct: 246 NGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLV 305
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVS--WNVIITVCVENLWLGEAVGYFVKMKDL 224
L+ Y C DA VFD V+ WN +I+ ++ EA+ +V+M
Sbjct: 306 GTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQN 365
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL-------GTALIDMYAK 277
G D T V +A +L G+ VH G VL C L A+ D Y+K
Sbjct: 366 GITSDLYTYCSVFNAIAASKSLQFGRVVH------GMVLKCGLDLMVVSVNNAIADAYSK 419
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CG + R +F RMEE ++ +W+ ++ +Q EEAL F M+ +PN TF V
Sbjct: 420 CGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSV 479
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
L +C +E G R H + G+ + + D+ A+ G + EA + + P
Sbjct: 480 LISCASLCFLEYG-RQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGK-VFDKISNP 537
Query: 398 NPIVLRALLSASSIH 412
+ + A++S + H
Sbjct: 538 DIVSWTAIISGYAQH 552
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 16/184 (8%)
Query: 233 MLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ--------LGTALIDMYAKCGAVGCA 284
++ VL C E G++ K VH G VL L +Y+KC A
Sbjct: 67 LIDVLRDCAEKGSIREAKAVH------GLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAA 120
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA 344
+F M + NV++W+ MI+G +HG + + F M NS I P+ + ++ +C
Sbjct: 121 CGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGL 180
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRA 404
+E G + H + G ++ ++ A+ G ++++Y ++ NM + N + A
Sbjct: 181 DSLELG-KMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSY-WVFNMMTEHNQVSWNA 238
Query: 405 LLSA 408
++S
Sbjct: 239 MISG 242
>gi|218199092|gb|EEC81519.1| hypothetical protein OsI_24907 [Oryza sativa Indica Group]
Length = 460
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 170/450 (37%), Positives = 257/450 (57%), Gaps = 15/450 (3%)
Query: 29 RQCLSFLKLCCSKKHLY---QIHAQIQVSGLQNDAQIL-KELVRFCTLSSSKNLTYARSI 84
R C++ L+L + L QIHA+ +G+ +L K L+ + L YA ++
Sbjct: 13 RHCVALLRLHLAAPSLAAAKQIHARALRAGVPTSHPLLAKHLLFHLAALRAPPLRYAVAV 72
Query: 85 LCNYVNDSV--PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI 142
L + P P N ++R A S RPR A+ + +RR P TYP +L+ACA +
Sbjct: 73 LSRLLPHGPLDPFPLNTVLRIAAGSPRPRVALELH---RRRLALPDTHTYPPLLQACARL 129
Query: 143 SGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC--ERSVVSWNV 200
L EG + A K+G + V+ N+LV YG+C A KVFD+M R++VSWN
Sbjct: 130 LALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNS 189
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
++ N E + F +M + F PD T++ VL+AC E G L+LG+ VH+ + + G
Sbjct: 190 MLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVG 249
Query: 261 TVLNCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEALELF 319
V N + ALID+YAKCG+V AR +F M V +W+++I+GLA +G+ +EALELF
Sbjct: 250 LVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELF 309
Query: 320 SNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILAR 379
S M+ + P +T +GVL AC+H G+V+DG+RYF M+ +GI P H M D+L R
Sbjct: 310 SLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGR 369
Query: 380 AGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNL 439
AG ++EAY +I+ MP +PN +V R LL + ++H + +G RL+EL+P S +
Sbjct: 370 AGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHK---KLELGKVAWERLVELDPGHSGDY 426
Query: 440 VIVANKYAEVGMWEKVSNVRRFMKNVGLKK 469
V+++N YA VGMW V +R+ M ++K
Sbjct: 427 VLLSNLYAAVGMWADVHVLRKTMVKDRVRK 456
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 170/516 (32%), Positives = 273/516 (52%), Gaps = 37/516 (7%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+S ++ C + + L QIH Q+ ++GL ND Q++ + V L++ NL Y+ +L N N
Sbjct: 13 ISMVEPCTTLRELKQIHTQLLINGLLNDPQLVGQFVASIALNNPNNLHYSNQVLDNSQNP 72
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRG--IKPTEFTYPFVLKACAEISGLNEGM 149
++ +N++IR ++ S P + + + + P +T+ F+++ A++ G
Sbjct: 73 TL-FTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQLLAHGTGS 131
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYG----------------------------SCRRKR 181
V K G + D + + L+ Y +C +
Sbjct: 132 SVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSACAKMG 191
Query: 182 D---ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
D A K+FD M + ++WN +I+ V+ EA+ F M+ G + +E +M+ VLS
Sbjct: 192 DVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVLS 251
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
AC+ LG L G+W H + + LGTALIDMYAKCG + A +F M+E NV+T
Sbjct: 252 ACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNVYT 311
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
WS+ I GLA +G E+ LELFS MK S+ PN +TF+ VL C+ G+VE+G ++F M
Sbjct: 312 WSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEGRKHFESMS 371
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD 418
V+GI+P HY M D+ RAGHL EA FI +MP +P+ ALL+A I+
Sbjct: 372 KVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNACKIYRNME-- 429
Query: 419 GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVEL 478
+G R+++ELE + V+++N YA+ W++VSNVR+ M G++K G S +E+
Sbjct: 430 -MGELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRKQPGCSVIEV 488
Query: 479 GGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
GG +H F+ G S A I +L ++ +K+ +
Sbjct: 489 GGEVHEFFVGDKSHPRYAEIQVMLGEISRRLKLSGY 524
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 173/472 (36%), Positives = 257/472 (54%), Gaps = 9/472 (1%)
Query: 45 YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGY 104
+Q +A I GL DA + LV + + +R + V + W LI G
Sbjct: 123 FQFYAHIVKFGLDFDAFVQNSLVS--AFAHCGYVDCSRRLFIETAKKDV-VSWTALINGC 179
Query: 105 AWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG-LDSD 163
+ R EA+ F++M+ G++ E T VL A A + + G V +SG + D
Sbjct: 180 LRNGRAVEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWD 239
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
VY + LV Y C DA KVF++M R++VSW +I V+ EA+ F +M
Sbjct: 240 VYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMII 299
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNCQLGTALIDMYAKCGAVG 282
G EP+++T+ L+AC +LG+L G+W+H + ++R + LN +LGTAL+DMY+KCG V
Sbjct: 300 EGIEPNQSTVTSALTACAQLGSLDQGRWLH-EYVDRSKLGLNSKLGTALVDMYSKCGCVD 358
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
A L+F ++ +V+ W+AMI GLA G A +L LFS M S + PN VTFLGVL AC
Sbjct: 359 EALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACA 418
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVL 402
H G+V++G F M + ++P HY M D+L RAG L+EA FI +MP +P P V
Sbjct: 419 HGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVW 478
Query: 403 RALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFM 462
AL S IH A +G + L++L+P S +++AN Y+ WE +NVRR M
Sbjct: 479 GALFSGCMIHKAFE---LGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLM 535
Query: 463 KNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
K G+ K SW+E+ G IH F + S +E +Y +L ++ +K+ +
Sbjct: 536 KGKGVDKSPACSWIEVNGVIHEFIAFDKSHIESINVYMMLGSVTAQLKLATY 587
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 184/364 (50%), Gaps = 13/364 (3%)
Query: 37 LCCSKK-----HLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LCC K HL Q + + SGL + L +L+R S++K+L Y +L + +
Sbjct: 12 LCCFHKCGTFDHLNQTTSILITSGLAHHTFFLSDLLR----SATKDLGYTL-LLFDRLAT 66
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
WN ++R ++ S +P+ + + ++ G+ P T+P +LKA +++ N Q
Sbjct: 67 PYIFLWNTIVRSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRNENP-FQF 125
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
A++ K GLD D + N+LV + C + ++F + ++ VVSW +I C+ N
Sbjct: 126 YAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRA 185
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQLGTA 270
EA+ FV+M+ G E DE T++ VL A L ++ G+WVH +E G V+ + +G+A
Sbjct: 186 VEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSA 245
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
L+DMY+KCG A +F+ M N+ +W A+I G Q +EAL++F M I PN
Sbjct: 246 LVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPN 305
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
T L AC G ++ G R+ HE + + D+ ++ G + EA
Sbjct: 306 QSTVTSALTACAQLGSLDQG-RWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVF 364
Query: 391 MNMP 394
+P
Sbjct: 365 EKLP 368
>gi|45935146|gb|AAS79604.1| putative pentatricopeptide repeat-containing protein [Ipomoea
trifida]
gi|118562903|dbj|BAF37793.1| hypothetical protein [Ipomoea trifida]
Length = 575
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 173/474 (36%), Positives = 249/474 (52%), Gaps = 13/474 (2%)
Query: 46 QIHAQIQVSGL--QNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRG 103
Q+HA+I SG N Q +L F LS S +L YAR IL ++ +N +IR
Sbjct: 11 QLHARILKSGAYDSNHGQDFHKLFTFSALSPSGDLNYARHIL-RTLHTPNSFYYNTMIRA 69
Query: 104 YAWSDRPREAVWVFIDMKRRG------IKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
Y+ S P A +F+ M+ +P FTYPFVLKAC++ G Q+ V K
Sbjct: 70 YSDSTDPTRAFTLFLYMQNPDDASVAVPRPDHFTYPFVLKACSKSGHARFGKQIHGLVFK 129
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
SG+ SD Y NN L+ Y A KVFD M +R VVSW II V+N EA+
Sbjct: 130 SGVGSDRYINNALIHLYSVSGEPNLAYKVFDKMPDRDVVSWTSIIDGFVDNDRPIEAIRL 189
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
F M + G EP+E T+ VL AC + G L+ G+ +H + E+ N + TALIDMYAK
Sbjct: 190 FTHMIENGIEPNEVTVASVLRACADTGALNTGERIHSFVKEKNFSSNANVSTALIDMYAK 249
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CG + A +F E +V+ W+A+I GLA HG +A+E F NMK S + + V
Sbjct: 250 CGCIDGALEVFDETLEKDVYVWTAIIAGLASHGLCMKAIEFFENMKKSDVKMDERAITAV 309
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
L A +AG+V +G +F ++ H IKP HY + D+L RAG LK+A FI MP +P
Sbjct: 310 LSAYRNAGLVSEGLLFFRRLKK-HKIKPTIQHYGCVVDMLTRAGRLKDAEEFIRKMPIEP 368
Query: 398 NPIVLRALLSASSI-HDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVS 456
+ ++ R L+ I D + + + E+ LL ++ R + + V++ N YA G WE+ +
Sbjct: 369 DAVLWRTLIWGCKILGDVERSERLVREL--ELLNMDSRDTGSYVLLENVYAATGKWEEKA 426
Query: 457 NVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
R M GL K S +E+ G +H F +G E +Y+ LE + ++
Sbjct: 427 KTRELMYQRGLMKPPACSRIEIDGVVHEFTAGDSRHDEATAVYEKLEDVEERLR 480
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 10/222 (4%)
Query: 141 EISGLNEGMQVQANVTKSG-LDSDVYTNNNLVRFYGSCRRKRD---ACKVFDDMCERSVV 196
EI+ + + MQ+ A + KSG DS+ + + + + + D A + + +
Sbjct: 2 EITSMTQAMQLHARILKSGAYDSNHGQDFHKLFTFSALSPSGDLNYARHILRTLHTPNSF 61
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGF------EPDETTMLVVLSACTELGNLSLGK 250
+N +I ++ A F+ M++ PD T VL AC++ G+ GK
Sbjct: 62 YYNTMIRAYSDSTDPTRAFTLFLYMQNPDDASVAVPRPDHFTYPFVLKACSKSGHARFGK 121
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
+H + + G + + ALI +Y+ G A +F +M + +V +W+++I G +
Sbjct: 122 QIHGLVFKSGVGSDRYINNALIHLYSVSGEPNLAYKVFDKMPDRDVVSWTSIIDGFVDND 181
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR 352
EA+ LF++M + I PN VT VL AC G + G R
Sbjct: 182 RPIEAIRLFTHMIENGIEPNEVTVASVLRACADTGALNTGER 223
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 172/469 (36%), Positives = 253/469 (53%), Gaps = 15/469 (3%)
Query: 42 KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP----W 97
K L+Q+HA + VSG +L +L+ + S ++Y R I VP P +
Sbjct: 26 KLLHQVHAHVIVSGYGCSRFLLTKLLNLACAAGS--ISYTRQIFL-----IVPNPDSFLF 78
Query: 98 NNLIRGYA-WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
+LIR + + + +++ + M + P+ +T+ V+K+CA++ L G + +V
Sbjct: 79 TSLIRSTSKFHNFSVYSLYFYTRMVLSNVAPSNYTFTSVIKSCADLVALRHGRIIHGHVL 138
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
+G SDVY L+ FYG C +A KVFD M +RSVV+WN +I+ +N + EA+
Sbjct: 139 VNGFGSDVYVQTALMSFYGKCGVLCNARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIR 198
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F +MK++G EP+ T + VLSAC LG LG WVH + G LN LGT+LI+MY
Sbjct: 199 LFDRMKEIGVEPNSATFVSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYT 258
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
+CG V AR +F M+E NV W+AMI G +GY +A+ELF M+ + + PN +TF+
Sbjct: 259 RCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVA 318
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
VL AC HAG+V +G R F M + + P H+ + D+L RAG L EAY FI + +
Sbjct: 319 VLSACAHAGLVNEGRRVFESMREEYRLVPEVEHHVCLVDMLGRAGLLDEAYNFIKEIHEE 378
Query: 397 PNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVS 456
P P + A+L A +H G+G +V L EP + VI++N YA G ++V
Sbjct: 379 PAPAIWTAMLGACKMHK---NFGLGAQVAEHRLASEPGNPAHYVILSNIYALAGRMDQVE 435
Query: 457 NVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
VR M LKK G S ++L + F G S E IY L+ L
Sbjct: 436 MVRDNMIRKCLKKQVGYSTIDLDRKTYLFSMGDKSHTETNEIYHYLDQL 484
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 166/510 (32%), Positives = 270/510 (52%), Gaps = 12/510 (2%)
Query: 5 PVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILK 64
P P + + S C+ L ++ S L C + + Q+HAQI +G + +
Sbjct: 36 PTPCS------QESECSHVLHYDTKRFRSSLLSCRNLFQVRQVHAQIATNGAFRNLAVAN 89
Query: 65 ELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRG 124
+L+ + + L + ++ P W+ ++ GYA W+F ++ R G
Sbjct: 90 KLL---YMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSG 146
Query: 125 IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDAC 184
+++ P V++AC ++ L G + K GLD + LV Y C+ DA
Sbjct: 147 APLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAH 206
Query: 185 KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELG 244
++F M +R + +W V+I E+ E++ +F +M++ G PD+ ++ V+ AC +LG
Sbjct: 207 QIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLG 266
Query: 245 NLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMIL 304
++ K +H + G L+ LGTA+IDMYAKCG+V AR +F RM+ NV TWSAMI
Sbjct: 267 AMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIA 326
Query: 305 GLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIK 364
HG E+ALELF M S I PN +TF+ +L AC+HAG++E+G R+F M +G+
Sbjct: 327 AYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVT 386
Query: 365 PMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEV 424
P HY M D+L RAG L EA I MP + + ++ ALL A IH ++ D + V
Sbjct: 387 PDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIH--RHLD-LAERV 443
Query: 425 RRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHR 484
R LL+L+ + + V+++N YA G WE ++ R M GL+K+ G +W+E+G +++
Sbjct: 444 ARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRKIPGRTWIEVGEKLYQ 503
Query: 485 FYSGYDSQVELAGIYQILETLNLHMKVLNF 514
F G + IY++L+ L ++V +
Sbjct: 504 FGVGDKTHPRSNEIYKMLKRLGEKLEVAGY 533
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 162/438 (36%), Positives = 248/438 (56%), Gaps = 5/438 (1%)
Query: 78 LTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVL 136
L YAR I + + + W+ +I GY SD +EA+ +F M + + PT T VL
Sbjct: 261 LLYARKIF-DVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVL 319
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
+ACA+++ L+ G ++ + K G D+ N L+ Y C DA + FD+M + V
Sbjct: 320 RACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSV 379
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
S++ I++ CV+N A+ F M+ G +PD TTML VL AC+ L L G H L
Sbjct: 380 SFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYL 439
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
I RG + + ALIDMY+KCG + AR +F+RM+ ++ +W+AMI+G HG EAL
Sbjct: 440 IVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEAL 499
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
LF ++ + P+ +TF+ +L +C+H+G+V +G +F M I P H M DI
Sbjct: 500 GLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDI 559
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGS 436
L RAG + EA+ FI NMPF+P+ + ALLSA IH +G EV +++ L P +
Sbjct: 560 LGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHK---NIELGEEVSKKIQSLGPEST 616
Query: 437 QNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELA 496
N V+++N Y+ G W+ +++R K+ GLKK+ G SW+E+ G +H F G S ++L+
Sbjct: 617 GNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLS 676
Query: 497 GIYQILETLNLHMKVLNF 514
I + LE L + MK L +
Sbjct: 677 QINRKLEELLVEMKRLGY 694
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 159/314 (50%), Gaps = 7/314 (2%)
Query: 32 LSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
L L+ C K L + IH + D+ +L +L R S + AR +
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRL--YLSCNQVVLARRLFDEI 69
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
N SV I WN +IR YAW+ A+ ++ M G++P ++TYPFVLKAC+ + + +G
Sbjct: 70 PNPSV-ILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
+++ ++ GL+SDV+ LV FY C +A ++F M R VV+WN +I C
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+AV ++M++ G P+ +T++ VL E L GK +H + R +G
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVG 248
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM-KNSSI 327
T L+DMYAKC + AR +F M N +WSAMI G +EALELF M ++
Sbjct: 249 TGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAM 308
Query: 328 SPNYVTFLGVLCAC 341
P VT VL AC
Sbjct: 309 DPTPVTLGSVLRAC 322
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 106/207 (51%)
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
Y +L+AC + L E ++ + K+ ++D + L R Y SC + A ++FD++
Sbjct: 11 YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIP 70
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
SV+ WN II N A+ + M LG P++ T VL AC+ L + G
Sbjct: 71 NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+H G + + TAL+D YAKCG + A+ LFS M +V W+AMI G + +G
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVL 338
++A++L M+ I PN T +GVL
Sbjct: 191 CDDAVQLIMQMQEEGICPNSSTIVGVL 217
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 162/438 (36%), Positives = 247/438 (56%), Gaps = 5/438 (1%)
Query: 78 LTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVL 136
L YAR I + + + W+ +I GY SD +EA+ +F M + + PT T VL
Sbjct: 261 LLYARKIF-DVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVL 319
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
+ACA+++ L+ G ++ + K G D+ N L+ Y C DA + FD M + V
Sbjct: 320 RACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSV 379
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
S++ I++ CV+N A+ F M+ G +PD TTML VL AC+ L L G H L
Sbjct: 380 SFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYL 439
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
I RG + + ALIDMY+KCG + AR +F+RM+ ++ +W+AMI+G HG EAL
Sbjct: 440 IVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEAL 499
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
LF ++ + P+ +TF+ +L +C+H+G+V +G +F M I P H M DI
Sbjct: 500 GLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDI 559
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGS 436
L RAG + EA+ FI NMPF+P+ + ALLSA IH +G EV +++ L P +
Sbjct: 560 LGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHK---NIELGEEVSKKIQSLGPEST 616
Query: 437 QNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELA 496
N V+++N Y+ G W+ +++R K+ GLKK+ G SW+E+ G +H F G S ++L+
Sbjct: 617 GNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLS 676
Query: 497 GIYQILETLNLHMKVLNF 514
I + LE L + MK L +
Sbjct: 677 QINRKLEELLVEMKRLGY 694
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 159/314 (50%), Gaps = 7/314 (2%)
Query: 32 LSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
L L+ C K L + IH + D+ +L +L R S + AR +
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRL--YLSCNQVVLARRLFDEI 69
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
N SV I WN +IR YAW+ A+ ++ M G++P ++TYPFVLKAC+ + + +G
Sbjct: 70 PNPSV-ILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
+++ ++ GL+SDV+ LV FY C +A ++F M R VV+WN +I C
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+AV ++M++ G P+ +T++ VL E L GK +H + R +G
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVG 248
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM-KNSSI 327
T L+DMYAKC + AR +F M N +WSAMI G +EALELF M ++
Sbjct: 249 TGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAM 308
Query: 328 SPNYVTFLGVLCAC 341
P VT VL AC
Sbjct: 309 DPTPVTLGSVLRAC 322
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 106/207 (51%)
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
Y +L+AC + L E ++ + K+ ++D + L R Y SC + A ++FD++
Sbjct: 11 YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIP 70
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
SV+ WN II N A+ + M LG P++ T VL AC+ L + G
Sbjct: 71 NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+H G + + TAL+D YAKCG + A+ LFS M +V W+AMI G + +G
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVL 338
++A++L M+ I PN T +GVL
Sbjct: 191 CDDAVQLIMQMQEEGICPNSSTIVGVL 217
>gi|225465641|ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Vitis vinifera]
Length = 539
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 175/523 (33%), Positives = 264/523 (50%), Gaps = 46/523 (8%)
Query: 26 SKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
S + ++ L+ C S QI A SGL L+ F +SS ++ ++ I
Sbjct: 10 STNQTLIALLENCRSMSEFKQIQAFFITSGLSQHHPFASRLLSFSAISSWGDIDHSYRIF 69
Query: 86 CNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAE 141
+P P WN++IRG++ P +V VF+ M R G+ P TYPF+ KA A
Sbjct: 70 LQ-----IPSPTISNWNSIIRGFSKGKNPNPSVSVFVKMLRFGVCPDHLTYPFIAKAVAR 124
Query: 142 ISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC---------- 191
+S L + V + K GL D + N+L+ YGSC A KVFD+M
Sbjct: 125 LSELRLALAVHCRIAKEGLWFDRFIANSLIHMYGSCGDIGSARKVFDEMLIRNSVSWNAM 184
Query: 192 ---------------------ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDE 230
+R VVSW+ +I CV+ G A+ F +M+ +G + +E
Sbjct: 185 LDGYAKCGDLDSARQVFESMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVGPKANE 244
Query: 231 TTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFS- 289
TM+ VL AC LG L G+ +H +++ L T+L+DMYAKCGA+ A +F
Sbjct: 245 VTMVSVLCACAHLGALEQGRTMHQYMVDNTMRFTLVLRTSLMDMYAKCGAIEEAIAVFRG 304
Query: 290 -RMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVE 348
M++ +V W+ +I GLA HG E+LELF M+ I P+ +T+L + AC H G+V
Sbjct: 305 VPMDQTDVLMWNTIIGGLATHGLVHESLELFKEMQVLGIVPDEITYLCLFSACAHGGLVH 364
Query: 349 DGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
+ + +F + G+ P HY M D+L+RAG L EAY FI MP +P +L ALL+
Sbjct: 365 EAWHFFKSLGK-QGMVPKSEHYACMVDVLSRAGQLAEAYDFIAQMPMEPTASMLGALLNG 423
Query: 409 SSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLK 468
H + + V R+L+ELEP + ++N YA V +W+ +R M+ G+K
Sbjct: 424 CMNH---RRFDLAERVGRKLIELEPDHDGRYIGLSNVYAGVKLWDNARMMREAMERRGVK 480
Query: 469 KMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
K G S+VE+ G++HRF + + +L IY +L T+ M V
Sbjct: 481 KSPGFSFVEVLGTLHRFIAHDKTHNDLEKIYMMLNTIVRQMMV 523
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 172/512 (33%), Positives = 269/512 (52%), Gaps = 46/512 (8%)
Query: 36 KLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPI 95
K C S K L +IHAQ+ +GL D ++ FCT S + ++ YA + N ++ +
Sbjct: 4 KNCTSMKDLQKIHAQLIKTGLAKDTIAASRVLAFCT-SPAGDINYAYLVFTQIRNPNLFV 62
Query: 96 PWNNLIRGYAWSDRPREAVWVFIDM--KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
WN +IRG++ S P A+ +FIDM +P TYP V KA A++ +EG Q+
Sbjct: 63 -WNTIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQLHG 121
Query: 154 NVTKSGLDSDVYTNNNLVRFY------GSCRRKRDAC----------------------- 184
V K GL++D + N ++ Y G +R D
Sbjct: 122 RVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEIDK 181
Query: 185 --KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
++FD M R+ VSWN +I+ V EA+ F +M++ G +P E TM+ +L+AC
Sbjct: 182 SRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNACAC 241
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
LG L G+W+H +++ LN + TA+IDMY+KCG++ A +F + + W+++
Sbjct: 242 LGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGLSCWNSL 301
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
ILGLA G EA+ LFS +++S++ P++V+F+GVL ACNHAGMV+ YF M +
Sbjct: 302 ILGLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLLMSETYK 361
Query: 363 IKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA----SSIHDAKYQD 418
I+P HY M D+L RAG L+EA I +MP P+ I+ +LLS+ +I AK
Sbjct: 362 IEPSIKHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREYGNIEMAK--- 418
Query: 419 GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVEL 478
+ +R+ EL+P S + ++++N YA +E+ R +K + K G S +E+
Sbjct: 419 ----QAAKRVNELDPNESSSFILLSNVYAAHNHFEEAIEQRLSLKEKQMDKEPGCSLIEV 474
Query: 479 GGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
G +H F +G IY L+ L L +K
Sbjct: 475 NGEVHEFVAGGRLHPRSKDIYHALDDLGLTLK 506
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 150/418 (35%), Positives = 239/418 (57%), Gaps = 3/418 (0%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN L+ GYA + PR+A+ +++ M G+ P FT +L AC+ + L+ G ++
Sbjct: 278 WNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFAL 337
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
++GL D + +L+ Y C + A +FD M RS+VSWNV+I +N EA+
Sbjct: 338 RNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAIN 397
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F +M G +P E ++ V AC++L L LGK +H ++ + + +++IDMYA
Sbjct: 398 LFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYA 457
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
K G +G ++ +F R+ E +V +W+ +I G HG +EALELF M + P+ TF G
Sbjct: 458 KGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTG 517
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
+L AC+HAG+VEDG YF++M ++H I+P HY + D+L RAG + +A I MP
Sbjct: 518 ILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGD 577
Query: 397 PNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVS 456
P+ + +LLS+ IH G+G +V +LLELEP +N V+++N +A G W+ V
Sbjct: 578 PDSRIWSSLLSSCRIHG---NLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVR 634
Query: 457 NVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
VR MK++GL+K G SW+E+GG +H F G + EL + + L + + + +
Sbjct: 635 RVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGY 692
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 133/249 (53%), Gaps = 2/249 (0%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANV 155
WN ++ Y ++ +A+ +F ++ KP FT P V+KACA + L G +
Sbjct: 175 WNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMA 234
Query: 156 TKSGLDSDVYTNNNLVRFYGSCRRKRDACK-VFDDMCERSVVSWNVIITVCVENLWLGEA 214
TK L SDV+ N L+ YG C +A K VFD M ++V SWN ++ +N +A
Sbjct: 235 TKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKA 294
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ +++M D G +PD T+ +L AC+ + +L G+ +H + G ++ +G +L+ +
Sbjct: 295 LDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSL 354
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y CG A++LF ME ++ +W+ MI G +Q+G +EA+ LF M + I P +
Sbjct: 355 YICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAI 414
Query: 335 LGVLCACNH 343
+ V AC+
Sbjct: 415 MCVCGACSQ 423
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 115/231 (49%), Gaps = 10/231 (4%)
Query: 135 VLKACAEISGLNEGMQVQANVTKSG-LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER 193
+L+AC + + G ++ V+ S +D N ++ Y C D+ VFD + +
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLG-FEPDETTMLVVLSACTELGNLSLGKWV 252
++ WN I++ N +A+ F ++ + +PD T+ V+ AC L +L LG+ +
Sbjct: 171 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 230
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCA-RLLFSRMEEINVWTWSAMILGLAQHGY 311
H + V + +G ALI MY KCG V A + +F M+ V +W+A++ G AQ+
Sbjct: 231 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSD 290
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
+AL+L+ M +S + P++ T +L AC+ + H E +HG
Sbjct: 291 PRKALDLYLQMTDSGLDPDWFTIGSLLLACSR-------MKSLHYGEEIHG 334
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 8/283 (2%)
Query: 33 SFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S L C K L+ +IH +GL D I L+ +L +A +L + +
Sbjct: 315 SLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLL---SLYICCGKPFAAQVLFDGM 371
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+ WN +I GY+ + P EA+ +F M GI+P E V AC+++S L G
Sbjct: 372 EHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGK 431
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
++ K+ L D++ +++++ Y + ++FD + E+ V SWNVII +
Sbjct: 432 ELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHG 491
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNCQLG 268
EA+ F KM LG +PD+ T +L AC+ G + G Q++ + +
Sbjct: 492 RGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHY 551
Query: 269 TALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHG 310
T ++DM + G + A L M + + WS+++ HG
Sbjct: 552 TCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHG 594
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 85/164 (51%), Gaps = 10/164 (6%)
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKD---LGFEPDETTMLVVLSACTELGNLSLG 249
R S + I +C E+ L EA+ + + D L M V+L AC + ++ +G
Sbjct: 66 RQFSSLHEIKKLC-ESGNLKEALDFLQRESDDVVLDSAQRSEAMGVLLQACGQRKDIEVG 124
Query: 250 KWVHLQLIERGTVL--NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA 307
+ +H +++ T + L T +I MY+ CG+ +R++F ++ N++ W+A++
Sbjct: 125 RRLH-EMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYT 183
Query: 308 QHGYAEEALELFSNMKN-SSISPNYVTFLGVLCACNHAGMVEDG 350
++ E+A+ +FS + + + P+ T V+ AC AG+++ G
Sbjct: 184 RNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC--AGLLDLG 225
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 167/503 (33%), Positives = 272/503 (54%), Gaps = 43/503 (8%)
Query: 45 YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGY 104
+++H+ I G ++D + L+ S NL AR++ + + + +N +I+GY
Sbjct: 131 HEVHSHIIKHGFESDLFVRNALIHL--YSVFGNLNLARTLFDESLVRDL-VSYNTMIKGY 187
Query: 105 AWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS--GLDS 162
A ++P A+ +F +M+ GI P EFT+ + C+ ++ N G Q+ A V K+ +DS
Sbjct: 188 AEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDS 247
Query: 163 DVYTNNNLVRFYGSC--------------RRKRDAC------------------KVFDDM 190
++ + +V Y C K A K+F+ M
Sbjct: 248 NILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHM 307
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
ER V+SW +I+ + EA+ F +M+ LG +PDE T++ VLSAC LG LGK
Sbjct: 308 HERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGK 367
Query: 251 WVHLQLIERGTV-LNCQLGTALIDMYAKCGAVGCARLLFSRMEE--INVWTWSAMILGLA 307
++ Q IE G N L A++DMYAKCG++ A +F R+ + + +++MI GLA
Sbjct: 368 RLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLA 427
Query: 308 QHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
QHG E A+ +F + ++ + P+ VTF+GVLCAC H+G++E+G + F M + +GIKP
Sbjct: 428 QHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQM 487
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRR 427
HY M D+L R G L+EAY + MPF+ N ++ RALLSA H +G ++
Sbjct: 488 EHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHG---NVKIGEIAGQK 544
Query: 428 LLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYS 487
LLE+E + V+++N A+ WE+ VR+ M++ G++K G S++ELGG+IHRF +
Sbjct: 545 LLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVA 604
Query: 488 GYDSQVELAGIYQILETLNLHMK 510
S + I +L+ + + +K
Sbjct: 605 SDKSHPQGKEIELMLKDMAMRLK 627
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 126/390 (32%), Positives = 192/390 (49%), Gaps = 35/390 (8%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
L L+ C S K QIHAQ V+GL + + L+ F +L SK+ +L + ++
Sbjct: 13 LCLLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDC 72
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKP-TEFTYPFVLKACAEISGLNEGMQ 150
WN +IRGY+ SD PREA+ +++ M +GI P FT+PF+L +CA +S L G +
Sbjct: 73 PNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHE 132
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
V +++ K G +SD++ N L+ Y A +FD+ R +VS+N +I E
Sbjct: 133 VHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQ 192
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE--RGTVLNCQLG 268
A+ F +M++ G PDE T + + S C+ L ++GK +H Q+ + R N L
Sbjct: 193 PESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLK 252
Query: 269 TALIDMYAK--------------------------------CGAVGCARLLFSRMEEINV 296
+A++DMYAK CG + AR LF+ M E +V
Sbjct: 253 SAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDV 312
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
+W+AMI G +Q G EALELF M+ I P+ VT + VL AC G + G R +H+
Sbjct: 313 ISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQ 372
Query: 357 MEHVHGIKPMRIHYHTMADILARAGHLKEA 386
I + D+ A+ G + A
Sbjct: 373 YIENGVFNQNTILTAAVMDMYAKCGSIDSA 402
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 155/431 (35%), Positives = 236/431 (54%), Gaps = 9/431 (2%)
Query: 78 LTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLK 137
L A+ C N + + WN +I +A + EA+ F M G+ P TY +L
Sbjct: 413 LPSAKMAFCQIKNPDI-VSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLC 471
Query: 138 ACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS-VV 196
C LN+G Q+ + + K G D ++ N+L+ Y C DA VF D+ + +V
Sbjct: 472 TCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLV 531
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
SWN I++ C++ GE + +M G +PD T+ +L C EL +L +G VH
Sbjct: 532 SWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYS 591
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
I+ G +L+ + LIDMYAKCG++ AR +F + +++ +WS++I+G AQ G EAL
Sbjct: 592 IKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEAL 651
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
LF M N + PN VT+LG L AC+H G+VE+G+R + ME HGI P R H+ + D+
Sbjct: 652 NLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDL 711
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHD--AKYQDGVGNEVRRRLLELEPR 434
LARAG L EA TFI + + LL+A H+ + G GN +L+L+P
Sbjct: 712 LARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAERGAGN-----ILKLDPS 766
Query: 435 GSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVE 494
S +V++ N +A G WE+V+ +R+ MK +G++K+ G SW+E+ H F+S S +
Sbjct: 767 NSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKVPGQSWIEVKDKFHIFFSEDSSHPQ 826
Query: 495 LAGIYQILETL 505
IY +LE L
Sbjct: 827 RNLIYTMLEEL 837
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 163/325 (50%), Gaps = 6/325 (1%)
Query: 89 VNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D++ +P W ++I GY+ + + +A+ ++I M R G P + T+ V+KAC
Sbjct: 216 VFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGD 275
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
++ G Q+ A+V KS + + N L+ Y + + A VF + + ++SW +IT
Sbjct: 276 IDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITG 335
Query: 205 CVENLWLGEAVGYFVKMKDLG-FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
++ + EA+ F + G ++P+E V SAC+ L L GK VH ++ G
Sbjct: 336 YIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRR 395
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
N G +L DMYAK G + A++ F +++ ++ +W+A+I A +G A EA++ F M
Sbjct: 396 NVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMI 455
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+ ++P+ +T++ +LC C + G R H G +++ + + HL
Sbjct: 456 HIGLTPDSITYISLLCTCGSPVRLNQG-RQIHSYIVKIGFDKEITVCNSLLTMYTKCSHL 514
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSA 408
+A ++ N + A+LSA
Sbjct: 515 HDALNVFRDISRNANLVSWNAILSA 539
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 11/186 (5%)
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
EA + +K + FEP T LV+ AC +L K +H +++ + L +I
Sbjct: 144 EAFDFHLKNSNSHFEPSTYTSLVL--ACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMI 201
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
+MY KCG++ AR +F M+ NV +W++MI G +Q+G A +A+ ++ M S P+ +
Sbjct: 202 NMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQL 261
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL----ARAGHLKEAYT 388
TF V+ AC AG ++ G + H H IK H+ T + L G ++ A
Sbjct: 262 TFGSVIKACYIAGDIDLGRQL-----HAHVIKSWFGHHLTSQNALISMYTNFGQIEHASN 316
Query: 389 FIMNMP 394
+P
Sbjct: 317 VFTRIP 322
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 156/416 (37%), Positives = 233/416 (56%), Gaps = 5/416 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I A SD EA++ F M G+ P + T+ +L AC LN+GMQ+ +
Sbjct: 350 VSWNAIIAALANSD-VNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSY 408
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER-SVVSWNVIITVCVENLWLGE 213
+ K GLD N+L+ Y C DA VF D+ E ++VSWN I++ C ++ GE
Sbjct: 409 IIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGE 468
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
A F M +PD T+ +L C EL +L +G VH ++ G V++ + LID
Sbjct: 469 AFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLID 528
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MYAKCG + AR +F + ++ +WS++I+G AQ G +EAL LF M+N + PN VT
Sbjct: 529 MYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVT 588
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
+LGVL AC+H G+VE+G+ ++ ME GI P R H M D+LARAG L EA FI
Sbjct: 589 YLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKT 648
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
F P+ + + LL++ H + +L+L+P S LV+++N +A G W+
Sbjct: 649 GFDPDITMWKTLLASCKTHG---NVDIAERAAENILKLDPSNSAALVLLSNIHASAGNWK 705
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
+V+ +R MK +G++K+ G SW+E+ IH F+S S + IY +LE L L M
Sbjct: 706 EVARLRNLMKQMGVQKVPGQSWIEVKDQIHVFFSEDSSHPQRGNIYTMLEDLWLQM 761
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 152/319 (47%), Gaps = 3/319 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +I GY+ + + +A+ ++I M R G P + T+ ++KAC ++ G Q+ +
Sbjct: 147 VSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGH 206
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V KSG D + N L+ Y + A VF + + ++SW +IT + + EA
Sbjct: 207 VIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEA 266
Query: 215 VGYFVKMKDLG-FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
+ F M G ++P+E V SAC L G+ + + G N G +L D
Sbjct: 267 LYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCD 326
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MYAK G + A+ F ++E ++ +W+A+I LA EA+ F M + + P+ +T
Sbjct: 327 MYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALANSD-VNEAIYFFCQMIHMGLMPDDIT 385
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
FL +LCAC + G + H G+ + +++ + + +L +A+ ++
Sbjct: 386 FLNLLCACGSPMTLNQGMQ-IHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDI 444
Query: 394 PFQPNPIVLRALLSASSIH 412
N + A+LSA S H
Sbjct: 445 SENGNLVSWNAILSACSQH 463
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 150/311 (48%), Gaps = 7/311 (2%)
Query: 111 REAVWVF-IDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNN 169
REA+ F +K I+ TY ++ AC + L G ++ ++ KS D+ N+
Sbjct: 61 REALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNH 120
Query: 170 LVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPD 229
++ YG C +DA K FD M RSVVSW ++I+ +N +A+ +++M G+ PD
Sbjct: 121 ILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPD 180
Query: 230 ETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFS 289
+ T ++ AC G++ LG +H +I+ G + ALI MY K G + A +F+
Sbjct: 181 QLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFT 240
Query: 290 RMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI-SPNYVTFLGVLCACNHAGMVE 348
+ ++ +W++MI G Q GY EAL LF +M + PN F V AC E
Sbjct: 241 MISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPE 300
Query: 349 DGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
G R M G+ ++ D+ A+ G L A + P+ + A+++A
Sbjct: 301 FG-RQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIE-SPDLVSWNAIIAA 358
Query: 409 ---SSIHDAKY 416
S +++A Y
Sbjct: 359 LANSDVNEAIY 369
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 166/460 (36%), Positives = 247/460 (53%), Gaps = 6/460 (1%)
Query: 55 GLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAV 114
G D +L L+ + +S A +L + V I WN +I GY + +E V
Sbjct: 201 GFMVDQFVLNSLIH---MYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVV 257
Query: 115 WVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFY 174
+F M E T V AC + N G + + G+ LV Y
Sbjct: 258 EMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMY 317
Query: 175 GSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTML 234
C A ++FD M R VV+W+ +I+ ++ EA+ F +M+ P++ TM+
Sbjct: 318 AKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMV 377
Query: 235 VVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI 294
VLSAC LG L GKWVH + + L LGTAL+D YAKCG + A F M
Sbjct: 378 SVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVR 437
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYF 354
N WTW+A+I G+A +G + EALELFS+M ++I P VTF+GVL AC+H +VE+G R+F
Sbjct: 438 NTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHF 497
Query: 355 HEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDA 414
M +GI P HY M D+L RAG + EAY FI NMP +PN +V RALLSA ++H
Sbjct: 498 TSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHK- 556
Query: 415 KYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMS 474
+G E ++++ L+P S N ++++N YA VG W+ + VR+ MK G++K+ G S
Sbjct: 557 --NVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKIPGCS 614
Query: 475 WVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+EL G+I F++ +L IY+ + + ++K++ +
Sbjct: 615 LIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGY 654
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 157/301 (52%), Gaps = 2/301 (0%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANV 155
+N LIR + + P +A+ +F++M + P + T +K+C+ + L+ G VQA
Sbjct: 138 YNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAYA 197
Query: 156 TKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
K G D + N+L+ Y SC A +F + + V++WN +I V+N E V
Sbjct: 198 FKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVV 257
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY 275
F M ++ DE T+L V +AC LG+ +LG+W+ E+G + + L TAL+DMY
Sbjct: 258 EMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMY 317
Query: 276 AKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFL 335
AKCG + AR LF RM +V WSAMI G Q EAL +F+ M+ + ++PN VT +
Sbjct: 318 AKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMV 377
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPF 395
VL AC G +E G ++ H + I + D A+ G +K+A +MP
Sbjct: 378 SVLSACAVLGALETG-KWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPV 436
Query: 396 Q 396
+
Sbjct: 437 R 437
>gi|357455473|ref|XP_003598017.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487065|gb|AES68268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 479
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 169/475 (35%), Positives = 261/475 (54%), Gaps = 25/475 (5%)
Query: 21 NSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTY 80
N+ L + ++ C + HL QIHA+I ++G ++ + +++ FC +S +N+ Y
Sbjct: 5 NTTLWKTEQTLMNLFNHCSTLNHLKQIHARIFLTGFNHNLILSGKIIMFCAVS--QNMNY 62
Query: 81 ARSILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
A ++ D +P P WN +IRG+ S F + +P FT+ F+L
Sbjct: 63 ALNVF-----DKIPKPDSFLWNTMIRGFGNSTTHSHNAIHFFKRMQLAHRPDNFTFSFIL 117
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
K A + +N G Q+ ++ K G ++ Y N+L+ YG + A ++F++M + ++V
Sbjct: 118 KIIARLRFVNLGKQLHCSLFKFGFENHTYVRNSLIHMYGMLKDIEIAHQLFEEMYQPNLV 177
Query: 197 SWNVIITVCVENLWLGEAVGYFVKM-----KDLGFEPDETTMLVVLSACTELGNLSLGKW 251
SWN II V EA+ F KM + +PD T++V LSAC +G+L G+
Sbjct: 178 SWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLDFGRK 237
Query: 252 VHLQLIERGTVL---NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ 308
VH + G + + AL+DMYAKCGAV A FS M+ NV +W+ MILG A
Sbjct: 238 VH-SFVRDGVNSFGESISVFNALVDMYAKCGAVEEAYETFSNMKRKNVVSWNVMILGFAS 296
Query: 309 HGYAEEALELFSNMKNSSIS-PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
HG EEAL LF+ M + ++ P+ +TFL VLCAC+H G+V++G RYF M + IKP
Sbjct: 297 HGNGEEALALFTRMLHENVERPDEITFLCVLCACSHGGLVDEGRRYFEIMNRDYNIKPTI 356
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRR 427
HY M D+L RAG EAY I +MP + N I+ R LL+A + +G +VR+
Sbjct: 357 KHYGCMVDLLGRAGLFVEAYELIKSMPVECNAIIWRTLLAACRNYG---NVELGEKVRKH 413
Query: 428 LLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMK-GMSWVELGGS 481
L+ELEP S + V++AN YA G W ++S RR M+ ++K + G S++ + G+
Sbjct: 414 LMELEPDHSSDYVLLANMYASTGQWNEMSKERRSMQERRVRKPEPGNSFIGIPGT 468
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 152/378 (40%), Positives = 226/378 (59%), Gaps = 3/378 (0%)
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
+A A++ + EG +V + ++G +S V+ N LV Y +C A K+F+ M ER++V
Sbjct: 3 RAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLV 62
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
+WN +I N EA+ F +M G EPD TM+ +LSAC ELG L+LG+ H+ +
Sbjct: 63 TWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYM 122
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
++ G N G AL+D+YAKCG++ A +F MEE +V +W+++I+GLA +G+ +EAL
Sbjct: 123 VKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEAL 182
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
ELF ++ + P+ +TF+GVL AC+H GMV++G+ YF M+ +GI P HY M D+
Sbjct: 183 ELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDL 242
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGS 436
L RAG +K+A+ FI NMP QPN +V R LL A +IH +G R +LL+LEP+ S
Sbjct: 243 LGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHG---HLALGEVARAQLLQLEPKHS 299
Query: 437 QNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELA 496
+ V+++N YA W V VRR M G+KK G S VEL +H F G S +
Sbjct: 300 GDYVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTE 359
Query: 497 GIYQILETLNLHMKVLNF 514
IY L + +K+ +
Sbjct: 360 EIYVKLAEITKLLKLEGY 377
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 110/219 (50%), Gaps = 2/219 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN++I GYA + RP EA+ +F +M RG++P FT +L ACAE+ L G +
Sbjct: 62 VTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVY 121
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ K GLD +++ N L+ Y C R A KVFD+M E+SVVSW +I N + EA
Sbjct: 122 MVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEA 181
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG-KWVHLQLIERGTVLNCQLGTALID 273
+ F +++ G P E T + VL AC+ G + G + E G V + ++D
Sbjct: 182 LELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVD 241
Query: 274 MYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGY 311
+ + G V A M + N W ++ HG+
Sbjct: 242 LLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGH 280
>gi|297817744|ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322593|gb|EFH53014.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 597
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 175/486 (36%), Positives = 267/486 (54%), Gaps = 18/486 (3%)
Query: 28 ARQCLS-FLKLCCSK-KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
+Q LS L+ SK K L +IHA + +G +L +L+ L ++ YAR +
Sbjct: 9 TKQMLSELLRASSSKPKQLKKIHAVVIRTGFSEKNSLLTQLLENLVLVG--DMCYARQVF 66
Query: 86 CNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAE 141
D +P P WN L +GY + P E+V ++ M+ G++P EFTYPFV+KA ++
Sbjct: 67 -----DEMPKPRIFLWNTLFKGYVRNQLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQ 121
Query: 142 ISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVI 201
+ L G+ + A+V K+G + LV Y A +F+ M + +V+WN
Sbjct: 122 LGVLPCGVSLHAHVLKNGFECLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAF 181
Query: 202 ITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGT 261
I VCV+ A+ YF KM + D T++ +LSAC +LG+L +G+ ++ + +
Sbjct: 182 IAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLDIGEEIYDRARKEEI 241
Query: 262 VLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSN 321
N + A +DM+ KCG+ AR+LF M++ NV +WS MI+G A +G + EAL LF+
Sbjct: 242 ECNIIVENARLDMHLKCGSTEAARVLFDDMKQRNVVSWSTMIVGYAMNGDSGEALALFTM 301
Query: 322 MKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH--GIKPMRIHYHTMADILAR 379
M+N + PNYVTFLGVL AC+HAG+V +G RYF M ++ ++P + HY M D+L R
Sbjct: 302 MQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVRLNDKNLEPRKEHYACMVDLLGR 361
Query: 380 AGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNL 439
+G L+EAY FI M +P+ + ALL A ++H +G +V L+E P
Sbjct: 362 SGLLEEAYEFIKKMRVEPDTGIWGALLGACAVHRDMI---LGQKVADVLVETAPDIGSYH 418
Query: 440 VIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIY 499
V+++N YA G W+ V VR M+ +G KK+ S VE G IH F G S + IY
Sbjct: 419 VLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFDGKIHFFNRGDISHPQSKAIY 478
Query: 500 QILETL 505
+ L+ +
Sbjct: 479 EKLDEI 484
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/418 (35%), Positives = 239/418 (57%), Gaps = 3/418 (0%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN L+ GYA + PR+A+ +++ M G+ P FT +L AC+ + L+ G ++
Sbjct: 376 WNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFAL 435
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
++GL D + +L+ Y C + A +FD M RS+VSWNV+I +N EA+
Sbjct: 436 RNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAIN 495
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F +M G +P E ++ V AC++L L LGK +H ++ + + +++IDMYA
Sbjct: 496 LFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYA 555
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
K G +G ++ +F R+ E +V +W+ +I G HG +EALELF M + P+ TF G
Sbjct: 556 KGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTG 615
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
+L AC+HAG+VEDG YF++M ++H I+P HY + D+L RAG + +A I MP
Sbjct: 616 ILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGD 675
Query: 397 PNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVS 456
P+ + +LLS+ IH G+G +V +LLELEP +N V+++N +A G W+ V
Sbjct: 676 PDSRIWSSLLSSCRIHG---NLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVR 732
Query: 457 NVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
VR MK++GL+K G SW+E+GG +H F G + EL + + L + + + +
Sbjct: 733 RVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGY 790
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 141/292 (48%), Gaps = 6/292 (2%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANV 155
WN ++ Y ++ +A+ +F ++ KP FT P V+KACA + L G +
Sbjct: 68 WNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMA 127
Query: 156 TKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
TK L SDV+ N L+ YG C +A KVF+ M ER++VSWN II EN +L E+
Sbjct: 128 TKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESF 187
Query: 216 GYFVKM--KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
F +M + F PD T++ VL C ++ G VH ++ G + +LID
Sbjct: 188 NAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLID 247
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK--NSSISPNY 331
MY+KC + A+LLF + ++ N+ +W++MI G A+ L M+ ++ + +
Sbjct: 248 MYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADE 307
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
T L VL C ++ + H HG++ + + R G L
Sbjct: 308 FTILNVLPVCLERSELQ-SLKELHGYSWRHGLQSNELVANAFIAAYTRCGAL 358
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 126/251 (50%), Gaps = 2/251 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRG--IKPTEFTYPFVLKACAEISGLNEGMQVQ 152
+ WN++I GYA + ++ M+ +K EFT VL C E S L ++
Sbjct: 271 VSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELH 330
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
+ GL S+ N + Y C + +VFD M ++V SWN ++ +N
Sbjct: 331 GYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPR 390
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
+A+ +++M D G +PD T+ +L AC+ + +L G+ +H + G ++ +G +L+
Sbjct: 391 KALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLL 450
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
+Y CG A++LF ME ++ +W+ MI G +Q+G +EA+ LF M + I P +
Sbjct: 451 SLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEI 510
Query: 333 TFLGVLCACNH 343
+ V AC+
Sbjct: 511 AIMCVCGACSQ 521
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 5/256 (1%)
Query: 135 VLKACAEISGLNEGMQVQANVTKSG-LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER 193
+L+AC + + G ++ V+ S +D N ++ Y C D+ VFD + +
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLG-FEPDETTMLVVLSACTELGNLSLGKWV 252
++ WN I++ N +A+ F ++ + +PD T+ V+ AC L +L LG+ +
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H + V + +G ALI MY KCG V A +F M E N+ +W+++I G +++G+
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183
Query: 313 EEALELFSNM--KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
+E+ F M S P+ T + VL C +E G H + G+ +
Sbjct: 184 QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMA-VHGLAVKLGLNEELMVN 242
Query: 371 HTMADILARAGHLKEA 386
+++ D+ ++ L EA
Sbjct: 243 NSLIDMYSKCRFLSEA 258
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 233 MLVVLSACTELGNLSLGKWVHLQLIERGTVL--NCQLGTALIDMYAKCGAVGCARLLFSR 290
M V+L AC + ++ +G+ +H +++ T + L T +I MY+ CG+ +R++F +
Sbjct: 1 MGVLLQACGQRKDIEVGRRLH-EMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDK 59
Query: 291 MEEINVWTWSAMILGLAQHGYAEEALELFSNMKN-SSISPNYVTFLGVLCACNHAGMVED 349
+ N++ W+A++ ++ E+A+ +FS + + + P+ T V+ AC AG+++
Sbjct: 60 LRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC--AGLLDL 117
Query: 350 GY-RYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
G + H M + + + + + G ++EA +MP
Sbjct: 118 GLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMP 163
>gi|225457355|ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 553
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/540 (33%), Positives = 277/540 (51%), Gaps = 48/540 (8%)
Query: 17 PSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSK 76
P+N + L + + S L+ C + K L QIH QI V+G +L +L+ F +S
Sbjct: 8 PANL-TGLRALQQHFFSLLQTCDTIKKLKQIHTQIIVNGFSQKNFLLVKLLSFYI--TSG 64
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
NL A + N S + WN +IRG++ S+ P + V ++ M +P EFTY F++
Sbjct: 65 NLLNAHKVFERIENPSTTV-WNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLI 123
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYG---------SCRRKRD----- 182
CA L EG QV V +G ++V+ +LV Y RR D
Sbjct: 124 GGCARSRLLREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDR 183
Query: 183 --------------------ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
A ++FD+M ER+VVSW +I C + +A+ F +M+
Sbjct: 184 NIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMR 243
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN----CQLGTALIDMYAKC 278
G + D+ ++ LSAC ELG+L LG W+H + ER N L +LI MYA C
Sbjct: 244 RAGVKLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASC 303
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS---PNYVTFL 335
G + A +F M++ + +W++MI G A+ G+AEEAL +F M+ P+ +TF+
Sbjct: 304 GVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFI 363
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPF 395
GVLCAC+HAG V+ G +F M GI P HY M D+L+RAG L EA+ I +MP
Sbjct: 364 GVLCACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPM 423
Query: 396 QPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP-RGSQNLVIVANKYAEVGMWEK 454
+PN V ALL IH K + + ++ LEL+P + + LV+++N YA W+
Sbjct: 424 KPNDAVWGALLGGCRIH--KNAELASHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQD 481
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
V+ VR+ M +G++K G SWV++ G +H F +G + + +Y++L + K+ +
Sbjct: 482 VALVRQKMVEIGVRKPAGRSWVQINGVVHDFVAGDWTHKHASSVYEMLSKITRQAKLEGY 541
>gi|110738388|dbj|BAF01120.1| hypothetical protein [Arabidopsis thaliana]
Length = 596
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 179/513 (34%), Positives = 270/513 (52%), Gaps = 24/513 (4%)
Query: 1 MVRFPVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDA 60
M R V + H FPP L KA KL S +Q HA I GL +D
Sbjct: 95 MRRNGVIPSRHTFPP---------LLKA-----VFKLRDSNP--FQFHAHIVKFGLDSDP 138
Query: 61 QILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDM 120
+ L+ SSS +A S L + D + W +I G+ + EA+ F++M
Sbjct: 139 FVRNSLI--SGYSSSGLFDFA-SRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEM 195
Query: 121 KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG-LDSDVYTNNNLVRFYGSCRR 179
K+ G+ E T VLKA ++ + G V ++G + DV+ ++LV YG C
Sbjct: 196 KKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSC 255
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
DA KVFD+M R+VV+W +I V++ + + F +M P+E T+ VLSA
Sbjct: 256 YDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSA 315
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C +G L G+ VH +I+ +N GT LID+Y KCG + A L+F R+ E NV+TW
Sbjct: 316 CAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTW 375
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+AMI G A HGYA +A +LF M +S +SPN VTF+ VL AC H G+VE+G R F M+
Sbjct: 376 TAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKG 435
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
++ HY M D+ R G L+EA I MP +P +V AL + +H Y+
Sbjct: 436 RFNMELKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLH-KDYE-- 492
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
+G R+++L+P S ++AN Y+E W++V+ VR+ MK+ + K G SW+E+
Sbjct: 493 LGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVK 552
Query: 480 GSIHRFYSGYDSQ-VELAGIYQILETLNLHMKV 511
G + F + D + +E +Y+ L+T+ + M++
Sbjct: 553 GKLCEFIAFDDKKPLESDDLYKTLDTVGVQMRL 585
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 129/445 (28%), Positives = 209/445 (46%), Gaps = 53/445 (11%)
Query: 43 HLYQIHAQIQVSGL---QNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNN 99
HL QIH + S + + D + + L R CT ++ YAR +LC S+ + W++
Sbjct: 16 HLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCT--AATQFRYARRLLCQLQTLSIQL-WDS 72
Query: 100 LIRGYAW--SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
LI ++ + R + + M+R G+ P+ T+P +LKA ++ N Q A++ K
Sbjct: 73 LIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNP-FQFHAHIVK 131
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
GLDSD + N+L+ Y S A ++FD ++ VV+W +I V N EA+ Y
Sbjct: 132 FGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVY 191
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNCQLGTALIDMYA 276
FV+MK G +E T++ VL A ++ ++ G+ VH +E G V + +G++L+DMY
Sbjct: 192 FVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYG 251
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KC A+ +F M NV TW+A+I G Q ++ + +F M S ++PN T
Sbjct: 252 KCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSS 311
Query: 337 VLCACNHAGMVEDGYRYFH--------EMEHVHGIKPM-----------------RIH-- 369
VL AC H G + G R H E+ G + R+H
Sbjct: 312 VLSACAHVGALHRG-RRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEK 370
Query: 370 ----YHTMADILARAGHLKEAYTFIMNM---PFQPNPIVLRALLSASSIHDAKYQDGVGN 422
+ M + A G+ ++A+ M PN + A+LSA + G+
Sbjct: 371 NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA------HGGLVE 424
Query: 423 EVRRRLLELEPRGSQNLVIVANKYA 447
E RR L + +G N+ + A+ YA
Sbjct: 425 EGRRLFLSM--KGRFNMELKADHYA 447
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 165/465 (35%), Positives = 247/465 (53%), Gaps = 6/465 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIH I SGLQ D + L+ S L A + + + +V + W +I G+A
Sbjct: 608 QIHMLIIESGLQLDVNLGNALINMYIRCGS--LQDAYEVFHSLRHRNV-MSWTAMIGGFA 664
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
R+A +F M+ G KP + T+ +LKAC + L+EG +V A++ SG + D
Sbjct: 665 DQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTG 724
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N L+ Y DA KVFD M R ++SWN +I +N G A+ + +M++ G
Sbjct: 725 VGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQG 784
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
++ + + +L+AC+ L GK VH ++++R + ++G ALI MYAKCG++ A+
Sbjct: 785 VVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQ 844
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F E NV TW+AMI AQHG A +AL+ F+ M I P+ TF +L ACNH+G
Sbjct: 845 EVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSG 904
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+V +G R F +E HG+ P HY + +L RAG +EA T I MPF P+ V L
Sbjct: 905 LVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETL 964
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
L A IH + L+L R V+++N YA G W+ V+ +RR M+
Sbjct: 965 LGACRIHG---NVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGR 1021
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
G++K G SW+E+ IH F + S E A IY+ L+ L+L M+
Sbjct: 1022 GIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEME 1066
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 131/485 (27%), Positives = 226/485 (46%), Gaps = 27/485 (5%)
Query: 32 LSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
LS L C + K L IH+ I G +D QI L+ + +L AR + N
Sbjct: 389 LSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISM--YARCGDLPRARELF-NT 445
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
+ I WN +I GYA + EA+ ++ M+ G+KP T+ +L AC S ++G
Sbjct: 446 MPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDG 505
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
+ ++ +SG+ S+ + N L+ Y C +A VF+ R ++SWN +I ++
Sbjct: 506 KMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQH 565
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
A F++MK G EPD+ T VL C L LG+ +H+ +IE G L+ LG
Sbjct: 566 GSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLG 625
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
ALI+MY +CG++ A +F + NV +W+AMI G A G +A ELF M+N
Sbjct: 626 NALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFK 685
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
P TF +L AC + +++G + + + G + + + +++G + +A
Sbjct: 686 PVKSTFSSILKACMSSACLDEGKKVIAHILN-SGYELDTGVGNALISAYSKSGSMTDARK 744
Query: 389 FIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAE 448
MP R ++S + + Q+G+G + +++ +G +V NK++
Sbjct: 745 VFDKMPN-------RDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQG-----VVLNKFSF 792
Query: 449 VGMWEKVSNV------RRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQIL 502
V + S+ +R + +KM+G V +G ++ Y+ S E ++
Sbjct: 793 VSILNACSSFSALEEGKRVHAEIVKRKMQGD--VRVGAALISMYAKCGSLEEAQEVFDNF 850
Query: 503 ETLNL 507
N+
Sbjct: 851 TEKNV 855
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 183/385 (47%), Gaps = 13/385 (3%)
Query: 13 FPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRF 69
+ P+P+ N + ++ C K+ L + IHAQ+ +G+ D + L+
Sbjct: 73 YQPRPTETNRAAY------VDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINM 126
Query: 70 CTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTE 129
++++ A + V I WN+LI YA ++A +F +M+ G P++
Sbjct: 127 YV--KCRSVSDAHQVFLKMPRRDV-ISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSK 183
Query: 130 FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD 189
TY +L AC + L G ++ + + ++G D N+L+ YG C A +VF
Sbjct: 184 ITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSG 243
Query: 190 MCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
+ R VVS+N ++ + + ++ E +G F +M G PD+ T + +L A T L G
Sbjct: 244 IYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEG 303
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
K +H + G + ++GTAL M+ +CG V A+ + +V ++A+I LAQH
Sbjct: 304 KRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQH 363
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIH 369
G+ EEA E + M++ + N T+L VL AC+ + + G + V ++I
Sbjct: 364 GHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIG 423
Query: 370 YHTMADILARAGHLKEAYTFIMNMP 394
+++ + AR G L A MP
Sbjct: 424 -NSLISMYARCGDLPRARELFNTMP 447
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 173/358 (48%), Gaps = 7/358 (1%)
Query: 32 LSFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
+S L CCS L +IH++I +G Q D ++ L+ ++L AR +
Sbjct: 187 ISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNM--YGKCEDLPSARQVFSGI 244
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
V + +N ++ YA E + +F M GI P + TY +L A S L+EG
Sbjct: 245 YRRDV-VSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEG 303
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
++ GL+SD+ L + C A + + +R VV +N +I ++
Sbjct: 304 KRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQH 363
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
EA + +M+ G + TT L VL+AC+ L G+ +H + E G + Q+G
Sbjct: 364 GHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIG 423
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
+LI MYA+CG + AR LF+ M + ++ +W+A+I G A+ EA++L+ M++ +
Sbjct: 424 NSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVK 483
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
P VTFL +L AC ++ DG + HE GIK + + ++ R G + EA
Sbjct: 484 PGRVTFLHLLSACTNSSAYSDG-KMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEA 540
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 165/342 (48%), Gaps = 4/342 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+IH GL +D ++ L ++ A+ L + + V + +N LI A
Sbjct: 305 RIHKLAVNEGLNSDIRVGTALATM--FVRCGDVAGAKQALEAFADRDVVV-YNALIAALA 361
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
EA + M+ G+ TY VL AC+ L G + +++++ G SDV
Sbjct: 362 QHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQ 421
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N+L+ Y C A ++F+ M +R ++SWN II GEA+ + +M+ G
Sbjct: 422 IGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEG 481
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+P T L +LSACT S GK +H ++ G N L AL++MY +CG++ A+
Sbjct: 482 VKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQ 541
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F ++ +W++MI G AQHG E A +LF MK + P+ +TF VL C +
Sbjct: 542 NVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPE 601
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
+E G R H + G++ + + ++ R G L++AY
Sbjct: 602 ALELG-RQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAY 642
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 148/403 (36%), Positives = 230/403 (57%), Gaps = 7/403 (1%)
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D +P + WN L+ G A S R EA+ + +M R G KP FT VL AE +
Sbjct: 129 VFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGAD 188
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
+ GM++ T++G DV+ ++L+ Y +C R + KVFD++ R + WN ++
Sbjct: 189 VRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAG 248
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
C +N + EA+G F +M G +P T ++ AC L +L LGK +H +I G N
Sbjct: 249 CAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGN 308
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+ ++LIDMY KCG V AR +F R++ ++ +W+AMI+G A HG A EAL LF M+
Sbjct: 309 VFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMEL 368
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
++ PN++TFL VL AC+HAG+V+ G++YF+ M +GI P H+ +AD L R G L+
Sbjct: 369 GNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLE 428
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
EAY FI M +P V LL A +H + EV +++ +LEPR + +I++N
Sbjct: 429 EAYNFISGMKIKPTASVWSTLLRACKVHKNTV---LAEEVAKKIFDLEPRSMGSHIILSN 485
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYS 487
Y+ G W + +++R+ M+ G++K SW+E+ H F +
Sbjct: 486 TYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVA 528
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 121/265 (45%), Gaps = 22/265 (8%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTE------FTYPFVLKACAEISGLNEGMQ 150
W + IR A A+ +F+ M R P + P LK+CA + G
Sbjct: 22 WAHQIRVAASQGDFHHAIALFLRM--RASDPAAACSSVLTSLPGALKSCAALGLRALGAS 79
Query: 151 VQANVTKSGLDSDVYTNNNLVRFY--------------GSCRRKRDACKVFDDMCERSVV 196
+ A +SG +D + N L+ Y GS KVFD+M E+ VV
Sbjct: 80 LHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVV 139
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
SWN ++ C E+ GEA+G +M G +PD T+ VL E ++ G +H
Sbjct: 140 SWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFA 199
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
G + +G++LIDMYA C + +F + + W++M+ G AQ+G +EAL
Sbjct: 200 TRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEAL 259
Query: 317 ELFSNMKNSSISPNYVTFLGVLCAC 341
LF M +S I P VTF ++ AC
Sbjct: 260 GLFRRMLHSGIKPMPVTFSSLIPAC 284
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 171/495 (34%), Positives = 265/495 (53%), Gaps = 17/495 (3%)
Query: 17 PSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRF-CTLSSS 75
P N D S + + L+ ++L Q+HA I VSGL +L +L+ CT S
Sbjct: 80 PVTRNFDTQSHSPVHEALLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGS- 138
Query: 76 KNLTYARSILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFT 131
+TYAR + +VP P +++L++ + + V + M G + +T
Sbjct: 139 --ITYARRLF-----PTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYT 191
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
+ V+KACA++S L G ++ ++V G SD+Y L+ Y + A KVFD M
Sbjct: 192 FTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMP 251
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
+R++++WN +I+ +N E++G F M + GF+PD T++ +LS+C++LG L G W
Sbjct: 252 QRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCW 311
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+H G LN LGT+LI+MY +CG V AR +F M+E NV TW+AMI G HGY
Sbjct: 312 LHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGY 371
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
+A+ELF+ M+ PN +TF+ VL AC H+G+++DG R F M+ +G+ P H
Sbjct: 372 GRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNV 431
Query: 372 TMADILARAGHLKEAYTFIMN-MPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLE 430
M D+ RAG L +AY FI +P +P P V ++L A +H +G +V +L
Sbjct: 432 CMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHR---NFDLGVKVAEHVLS 488
Query: 431 LEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYD 490
+EP + V+++N YA G ++V VR M LKK G S +E+ + F G
Sbjct: 489 VEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDK 548
Query: 491 SQVELAGIYQILETL 505
S + IY+ L+ L
Sbjct: 549 SHPQTNTIYRYLDEL 563
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 165/511 (32%), Positives = 259/511 (50%), Gaps = 34/511 (6%)
Query: 19 NCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNL 78
+C+ L + +S L+ C ++ L QIHA++ +GL D+ + + + FC S+S +
Sbjct: 5 SCSFSLEHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDF 64
Query: 79 TYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKA 138
I+ + + WN +IRG++ SD P ++ ++ M +T+P +LKA
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKA 124
Query: 139 CAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD---------- 188
C+ +S E Q+ A +TK G ++DVY N+L+ Y + A +FD
Sbjct: 125 CSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSW 184
Query: 189 ---------------------DMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
M E++ +SW +I+ V+ EA+ F +M++ E
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
PD ++ LSAC +LG L GKW+H L + ++ LG LIDMYAKCG + A +
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEV 304
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMV 347
F +++ +V W+A+I G A HG+ EA+ F M+ I PN +TF VL AC++ G+V
Sbjct: 305 FKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLV 364
Query: 348 EDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLS 407
E+G F+ ME + +KP HY + D+L RAG L EA FI MP +PN ++ ALL
Sbjct: 365 EEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLK 424
Query: 408 ASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGL 467
A IH +G E+ L+ ++P V AN +A W+K + RR MK G+
Sbjct: 425 ACRIHK---NIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGV 481
Query: 468 KKMKGMSWVELGGSIHRFYSGYDSQVELAGI 498
K+ G S + L G+ H F +G S E+ I
Sbjct: 482 AKVPGCSTISLEGTTHEFLAGDRSHPEIEKI 512
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 175/497 (35%), Positives = 263/497 (52%), Gaps = 23/497 (4%)
Query: 29 RQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
+ C + L L + Q H Q + G + D + LV S L AR++ +
Sbjct: 160 KSCSALLDLHSGR----QAHQQALIFGFEPDLFVSSALVDM--YSKCGELRDARTLF-DE 212
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFID--MKRRG--------IKPTEFTYPFVLKA 138
++ + W ++I GY +D A+ +F + ++ G + P VL A
Sbjct: 213 ISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVS--VLSA 270
Query: 139 CAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSW 198
C+ +S + V + K G + D+ N L+ Y C + +VFD M ER V+SW
Sbjct: 271 CSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISW 330
Query: 199 NVIITVCVENLWLGEAVGYFVKM-KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLI 257
N II V +N E++ F +M KD + T+ VL AC G+ LGK +H Q+I
Sbjct: 331 NSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVI 390
Query: 258 ERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALE 317
+ G N +GT++IDMY KCG V AR F RM E NV +WSAM+ G HG+A+EALE
Sbjct: 391 KMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALE 450
Query: 318 LFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL 377
+F M + + PNY+TF+ VL AC+HAG++E+G+ +F M H ++P HY M D+L
Sbjct: 451 VFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLL 510
Query: 378 ARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
RAG+LKEA+ I M +P+ +V ALL A +H K D +G R+L EL+P+
Sbjct: 511 GRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMH--KNVD-LGEISARKLFELDPKNCG 567
Query: 438 NLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAG 497
V+++N YA+ G WE V +R MKN GL K G S V++ G +H F G +
Sbjct: 568 YYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEK 627
Query: 498 IYQILETLNLHMKVLNF 514
IY+ LE L++ ++ + +
Sbjct: 628 IYEYLEKLSMKLQEVGY 644
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 177/353 (50%), Gaps = 16/353 (4%)
Query: 6 VPTTNHIFPPKPSN----CNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQ 61
+ T I PK S+ C ++ + L +++ ++ H Q SG
Sbjct: 28 ILVTKKINLPKGSHNDLCCQQEIERSVSRDLPNVQITAQHFLIFPEHTAFQFSGFSKRRS 87
Query: 62 ILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMK 121
I V S++ NLT ++ YV+ + WN++I A S EA+ F M+
Sbjct: 88 ICAGAVLRRRYSNNPNLT---TLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMR 144
Query: 122 RRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKR 181
+ +KP T+P +K+C+ + L+ G Q G + D++ ++ LV Y C R
Sbjct: 145 KLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELR 204
Query: 182 DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK--MKDLGFEP------DETTM 233
DA +FD++ R++VSW +IT V+N A+ F + +++ G E D M
Sbjct: 205 DARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAM 264
Query: 234 LVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEE 293
+ VLSAC+ + S+ + VH LI+RG + + L+D YAKCG +G +R +F M E
Sbjct: 265 VSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAE 324
Query: 294 INVWTWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAG 345
+V +W+++I AQ+G + E++E+F M K+ I+ N VT VL AC H+G
Sbjct: 325 RDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSG 377
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 164/466 (35%), Positives = 247/466 (53%), Gaps = 9/466 (1%)
Query: 48 HAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWS 107
H ++ GL ND + +V + AR + + + + + WN+L+ GYA
Sbjct: 140 HCEVFKLGLDNDHHTVNSMVTMYFRCGENGV--ARKVF-DEITEKDLVSWNSLLSGYAKL 196
Query: 108 DRPREAVWVFIDMKRR-GIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
REAV VF ++ G +P E + VL AC E+ L G V+ V + G+ + Y
Sbjct: 197 GFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYI 256
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
+ L+ Y C + ++FD M R ++WN I+ +N EA+ F MK+ G
Sbjct: 257 GSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGV 316
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
+P++ T+ VLSAC +G L LGK + RG + + TALIDMYAKCG++ A+
Sbjct: 317 DPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQR 376
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS--SISPNYVTFLGVLCACNHA 344
+F+ M N +W+AMI LA HG A+EAL LF M + S PN +TF+ +L AC HA
Sbjct: 377 VFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHA 436
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRA 404
G+V++GYR F M + G+ P HY M D+L+RAGHL EA+ I MP +P+ + L A
Sbjct: 437 GLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGA 496
Query: 405 LLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKN 464
L SA K +G V + LLEL+P S N +I + Y + MW+ + +R M+
Sbjct: 497 LHSACQ---RKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRE 553
Query: 465 VGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
G+ K G SW+E+G + F SG ++ + I++ L +K
Sbjct: 554 NGVTKTPGCSWIEVGNQLREFLSGDGLTLDSIDVRNIIDLLYEELK 599
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 132/384 (34%), Positives = 202/384 (52%), Gaps = 12/384 (3%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LS LK C S K L QIH Q + + +L + + S K+ TY+ I +
Sbjct: 25 LSLLKQCPSTKTLQQIHTQFTIHSIHKPNHLLSQSI------SLKDFTYSTLIFSHITPH 78
Query: 92 SVPIPWNNLIRGYA--WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+N ++R W D P + ++ MK I P FT+PFV ACA + +
Sbjct: 79 PNDYAFNIMLRATTTTWHDYPL-TLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMAR 137
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
V K GLD+D +T N++V Y C A KVFD++ E+ +VSWN +++ +
Sbjct: 138 LAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLG 197
Query: 210 WLGEAVGYFVKMK-DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+ EAV F +++ + GFEPDE +++ VL AC ELG+L LG+WV ++ERG +N +G
Sbjct: 198 FAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIG 257
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
+ALI MY+KCG + +R +F M + TW+A I AQ+G A+EA+ LF +MK + +
Sbjct: 258 SALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVD 317
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
PN VT VL AC G ++ G + H G++ + D+ A+ G L+ A
Sbjct: 318 PNKVTLTAVLSACASIGALDLGKQMDEYATH-RGLQHDIFVATALIDMYAKCGSLESAQR 376
Query: 389 FIMNMPFQPNPIVLRALLSASSIH 412
+MP + N A++SA + H
Sbjct: 377 VFNDMP-RKNDASWNAMISALASH 399
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 171/495 (34%), Positives = 265/495 (53%), Gaps = 17/495 (3%)
Query: 17 PSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRF-CTLSSS 75
P N D S + + L+ ++L Q+HA I VSGL +L +L+ CT S
Sbjct: 16 PVTRNFDTQSHSPVHEALLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGS- 74
Query: 76 KNLTYARSILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFT 131
+TYAR + +VP P +++L++ + + V + M G + +T
Sbjct: 75 --ITYARRLF-----PTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYT 127
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
+ V+KACA++S L G ++ ++V G SD+Y L+ Y + A KVFD M
Sbjct: 128 FTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMP 187
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
+R++++WN +I+ +N E++G F M + GF+PD T++ +LS+C++LG L G W
Sbjct: 188 QRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCW 247
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+H G LN LGT+LI+MY +CG V AR +F M+E NV TW+AMI G HGY
Sbjct: 248 LHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGY 307
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
+A+ELF+ M+ PN +TF+ VL AC H+G+++DG R F M+ +G+ P H
Sbjct: 308 GRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNV 367
Query: 372 TMADILARAGHLKEAYTFIMN-MPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLE 430
M D+ RAG L +AY FI +P +P P V ++L A +H +G +V +L
Sbjct: 368 CMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHR---NFDLGVKVAEHVLS 424
Query: 431 LEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYD 490
+EP + V+++N YA G ++V VR M LKK G S +E+ + F G
Sbjct: 425 VEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDK 484
Query: 491 SQVELAGIYQILETL 505
S + IY+ L+ L
Sbjct: 485 SHPQTNTIYRYLDEL 499
>gi|147825156|emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera]
Length = 532
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 259/514 (50%), Gaps = 46/514 (8%)
Query: 35 LKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP 94
LK C S QI A SGL L+ F +SS ++ ++ I +P
Sbjct: 12 LKNCRSMSEFKQIQAFFITSGLSQHHPFASRLLSFSAISSWGDIDHSYRIFLQ-----IP 66
Query: 95 IP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
P WN++IRG++ P +V VF+ M R G+ P TYPFV KA A +S L +
Sbjct: 67 SPTISNWNSIIRGFSKGKNPNPSVSVFVKMLRFGVCPDHLTYPFVAKAVARLSELRLALA 126
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC------------------- 191
V + K GL D + N+L+ YGSC A KVFD+M
Sbjct: 127 VHCRIAKEGLWFDRFIANSLIHMYGSCGDIGSARKVFDEMLIRNSVSWNAMLDGYAKCGD 186
Query: 192 ------------ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
+R VVSW+ +I CV+ G A+ F +M+ +G + + TM+ VL A
Sbjct: 187 LDSAHQVFXSMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVGPKANXVTMVSVLCA 246
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFS--RMEEINVW 297
C LG L G+ +H +++ L T+L+DMYAKCGA+ A +F M++ +V
Sbjct: 247 CAHLGALEXGRXMHQYMVDNTMRFTLVLRTSLMDMYAKCGAIEEAIAVFRGVPMDQTDVL 306
Query: 298 TWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM 357
W+ +I GLA HG E+LELF M+ I P+ +T+L + AC H G+V + + +F +
Sbjct: 307 MWNTIIGGLATHGLVXESLELFKEMQVLGIVPDEITYLCLFSACAHGGLVHEAWHFFKSL 366
Query: 358 EHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQ 417
G+ P HY M D+L+RAG L EAY FI MP +P +L ALL+ H +
Sbjct: 367 GK-QGMVPKSEHYACMVDVLSRAGQLAEAYDFIAQMPMEPTASMLGALLNGCMNH---RR 422
Query: 418 DGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVE 477
+ V R+L+ELEP + ++N YA V +W+ +R M+ G+KK G S+VE
Sbjct: 423 FDLAERVGRKLIELEPDHDGRYIGLSNVYAGVKLWDNARMMREAMERRGVKKSPGFSFVE 482
Query: 478 LGGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
+ G++HRF + + +L IY +L T+ M V
Sbjct: 483 VLGTLHRFIAHDKTHNDLEKIYMMLNTIVRQMMV 516
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/471 (34%), Positives = 248/471 (52%), Gaps = 6/471 (1%)
Query: 44 LYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRG 103
L + HA+I GLQ D++IL +F + S N A SI+ + + WN +IRG
Sbjct: 736 LKKTHAKIFAYGLQYDSRIL---TKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRG 792
Query: 104 YAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD 163
+A R ++ ++ M +G+KP +F +PF LK+CA +S L G + ++ G +D
Sbjct: 793 FATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSND 852
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
++ + LV Y C A VFD M R +VSW +I+ N + E +G+F M+
Sbjct: 853 LFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRS 912
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G P+ ++L VL AC LG L G+W H +I+ G + + TA++DMY+KCG++
Sbjct: 913 SGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDL 972
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
AR LF ++ WSAMI HG+ +A++LF M + + P++VTF VL AC+H
Sbjct: 973 ARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSH 1032
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
+G++E+G YF M I +Y M D+L RAG L EA I NMP +P+ +
Sbjct: 1033 SGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWG 1092
Query: 404 ALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMK 463
+LL A IH+ + ++ L L+P + V+++N YA W +V VR+ M
Sbjct: 1093 SLLGACRIHN---NLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMA 1149
Query: 464 NVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
G K++G S VE +H+F G S + +Y LE L MK L +
Sbjct: 1150 RRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGY 1200
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 217/416 (52%), Gaps = 4/416 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I W+ +I YA ++ EA+ +F +M + +P T L+ACA L EG ++
Sbjct: 273 ISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKI 332
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
G + D + L+ Y C +A +F + ++ VVSW +++ +N ++
Sbjct: 333 AVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKS 392
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+G F M G +PD ++ +L+A +ELG +H ++ G N +G +LI++
Sbjct: 393 MGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIEL 452
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVT 333
Y+KCG++G A LF M +V WS+MI HG EALE+F M KNS++ PN VT
Sbjct: 453 YSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVT 512
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
FL +L AC+HAG+VE+G + F M H + ++P H+ M D+L R G L +A I M
Sbjct: 513 FLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRM 572
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
P P V ALL A IH + +G + L L+P + ++++N YA G W+
Sbjct: 573 PIPAGPHVWGALLGACRIH---HNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWD 629
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
V+ +R +K GLKKM G S VE+ G +H F + + IY++L L M
Sbjct: 630 NVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQM 685
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 129/474 (27%), Positives = 216/474 (45%), Gaps = 34/474 (7%)
Query: 27 KARQCL-SFLKLCCSKKHLYQIHAQIQVSGLQND---AQILKELVRFCTLSSSKNLTYAR 82
++RQ L + C + + + Q+H+Q+ +G+ +D A L L C +L AR
Sbjct: 2 RSRQVLVDLFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCA-----SLQAAR 56
Query: 83 SILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVF-IDMKRRGIKPTEFTYPFVLK 137
+ D P P WN+ +R Y + E + +F + + G P FT P LK
Sbjct: 57 KVF-----DETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALK 111
Query: 138 ACAEISGLNEGMQVQANVTKSG-LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
ACA + L G + K+ + SD++ + LV Y C + +A KVF++ V
Sbjct: 112 ACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTV 171
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLG-FEPDETTMLVVLSACTELGNLSLGKWVHLQ 255
W ++T +N EA+ F +M + D T++ V+SAC +L N+ G VH
Sbjct: 172 LWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGL 231
Query: 256 LIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEA 315
+I R + L +L+++YAK G A LFS+M E +V +WS MI A + A EA
Sbjct: 232 VIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEA 291
Query: 316 LELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMAD 375
L LF M PN VT + L AC + +E+G + H++ G + + D
Sbjct: 292 LNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEG-KKIHKIAVWKGFELDFSVSTALID 350
Query: 376 ILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLE--LEP 433
+ + EA +P + + + ALLS + + Y+ V R +L ++P
Sbjct: 351 MYMKCSCPDEAVDLFQRLP-KKDVVSWVALLSGYAQNGMAYK---SMGVFRNMLSDGIQP 406
Query: 434 RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYS 487
+ I+A +E+G++++ + ++ G S V +G S+ YS
Sbjct: 407 DAVAVVKILAAS-SELGIFQQALCLHGYVVRSGFN-----SNVFVGASLIELYS 454
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 155/319 (48%), Gaps = 3/319 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ W +++ GY ++ P EA+ +F M + T V+ ACA++ + G V
Sbjct: 171 VLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHG 230
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
V + D D+ N+L+ Y ++ A +F M E+ V+SW+ +I N E
Sbjct: 231 LVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANE 290
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
A+ F +M + FEP+ T++ L AC NL GK +H + +G L+ + TALID
Sbjct: 291 ALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALID 350
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MY KC A LF R+ + +V +W A++ G AQ+G A +++ +F NM + I P+ V
Sbjct: 351 MYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVA 410
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
+ +L A + G+ + H G ++ ++ ++ G L +A M
Sbjct: 411 VVKILAASSELGIFQQAL-CLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGM 469
Query: 394 PFQPNPIVLRALLSASSIH 412
+ + ++ ++++A IH
Sbjct: 470 IVR-DVVIWSSMIAAYGIH 487
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 163/486 (33%), Positives = 260/486 (53%), Gaps = 10/486 (2%)
Query: 32 LSFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
+S L C S L QI I +G +D ++ L+ S L A +
Sbjct: 417 MSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGS--LKDAHRVFEKI 474
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
+V + WN +I Y ++ A+ F + + GIKP T+ +L C L G
Sbjct: 475 SKQNV-VAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELG 533
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
V + K+GL+SD++ +N LV + +C A +F+DM +R +VSWN II V++
Sbjct: 534 KWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQH 593
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
A YF M++ G +PD+ T +L+AC L+ G+ +H + E + +G
Sbjct: 594 GKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVG 653
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
T LI MY KCG++ A +F ++ + NV++W++MI G AQHG +EALELF M+ +
Sbjct: 654 TGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVK 713
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
P+++TF+G L AC HAG++E+G +F M+ + I+P HY M D+ RAG L EA
Sbjct: 714 PDWITFVGALSACAHAGLIEEGLHHFQSMKEFN-IEPRMEHYGCMVDLFGRAGLLNEAVE 772
Query: 389 FIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAE 448
FI+ M +P+ V ALL A +H + + ++ LEL+P + VI++N YA
Sbjct: 773 FIIKMQVEPDSRVWGALLGACQVH---LNVELAEKAAQKKLELDPNDNGVFVILSNIYAA 829
Query: 449 VGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLH 508
GMW++V+ +R+ M + G+ K G SW+E+ G +H FYS + + I+ LE L++
Sbjct: 830 AGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHME 889
Query: 509 MKVLNF 514
M+ L +
Sbjct: 890 MRQLGY 895
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 197/390 (50%), Gaps = 11/390 (2%)
Query: 29 RQCLS-FLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSI 84
RQ S L+LC K+L +I+ I+ SG+Q D + L+ + N A+ I
Sbjct: 110 RQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINM--YAKCGNTISAKQI 167
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
+ V WN L+ GY EA + M + +KP + T+ +L ACA+
Sbjct: 168 FDDMREKDV-YSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARN 226
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
+++G ++ + K+G D+D++ L+ + C DA KVFD++ R +V+W +IT
Sbjct: 227 VDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITG 286
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
+ +A F +M++ G +PD+ + +L AC L GK VH ++ E G
Sbjct: 287 LARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTE 346
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+GTA++ MY KCG++ A +F ++ NV +W+AMI G AQHG +EA F+ M
Sbjct: 347 IYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIE 406
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYR-YFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
S I PN VTF+ +L AC+ ++ G + H +E +G R+ + + A+ G L
Sbjct: 407 SGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDD-RVRT-ALLSMYAKCGSL 464
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHD 413
K+A+ + Q N + A+++A H+
Sbjct: 465 KDAHRVFEKISKQ-NVVAWNAMITAYVQHE 493
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 202/444 (45%), Gaps = 50/444 (11%)
Query: 32 LSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
+S L+ C + L Q +HA+++ G + + ++ T S + A + +
Sbjct: 316 VSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGS--MEDALEVF-DL 372
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
V + W +I G+A R EA F M GI+P T+ +L AC+ S L G
Sbjct: 373 VKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRG 432
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
Q+Q ++ ++G SD L+ Y C +DA +VF+ + +++VV+WN +IT V++
Sbjct: 433 QQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQH 492
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
A+ F + G +P+ +T +L+ C +L LGKWVH +++ G + +
Sbjct: 493 EQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVS 552
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
AL+ M+ CG + A+ LF+ M + ++ +W+ +I G QHG + A + F M+ S I
Sbjct: 553 NALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIK 612
Query: 329 PNYVTFLGVLCACN-----------HA------------------------GMVEDGYRY 353
P+ +TF G+L AC HA G +ED ++
Sbjct: 613 PDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQV 672
Query: 354 FHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP---FQPNPIVLRALLSASS 410
FH++ K + +M A+ G KEA M +P+ I LSA +
Sbjct: 673 FHKLP-----KKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACA 727
Query: 411 IHDAKYQDGVGNEVRRRLLELEPR 434
H ++G+ + + +EPR
Sbjct: 728 -HAGLIEEGLHHFQSMKEFNIEPR 750
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 156/310 (50%), Gaps = 5/310 (1%)
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D++P + W ++I G A R ++A +F M+ G++P + + +L+AC
Sbjct: 268 VFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEA 327
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L +G +V A + + G D+++Y ++ Y C DA +VFD + R+VVSW +I
Sbjct: 328 LEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAG 387
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
++ + EA +F KM + G EP+ T + +L AC+ L G+ + +IE G +
Sbjct: 388 FAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSD 447
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
++ TAL+ MYAKCG++ A +F ++ + NV W+AMI QH + AL F +
Sbjct: 448 DRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLK 507
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
I PN TF +L C + +E G ++ H + G++ + + + G L
Sbjct: 508 EGIKPNSSTFTSILNVCKSSDSLELG-KWVHFLIMKAGLESDLHVSNALVSMFVNCGDLM 566
Query: 385 EAYTFIMNMP 394
A +MP
Sbjct: 567 SAKNLFNDMP 576
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 188/406 (46%), Gaps = 45/406 (11%)
Query: 65 ELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRG 124
E +R T S S R ++ + D+ N ++ + + + EA+ V +
Sbjct: 48 ETLRMLTTSFSGRCPKGRCVVFADIKDTQKA--NAVLNRLSKAGQFNEAMQVLERVDSSH 105
Query: 125 IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDAC 184
I+ TY +L+ C + L +G ++ ++ KSG+ D++ N L+ Y C A
Sbjct: 106 IQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAK 165
Query: 185 KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELG 244
++FDDM E+ V SWN+++ V++ EA +M +PD+ T + +L+AC +
Sbjct: 166 QIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADAR 225
Query: 245 NLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMIL 304
N+ G+ ++ +++ G + +GTALI+M+ KCG +G A +F + ++ TW++MI
Sbjct: 226 NVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMIT 285
Query: 305 GLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHV---- 360
GLA+HG ++A LF M+ + P+ V F+ +L ACNH +E G + M+ V
Sbjct: 286 GLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDT 345
Query: 361 -----HGIKPMRIHYHTMADIL---------------------ARAGHLKEAYTFIMNM- 393
I M +M D L A+ G + EA+ F M
Sbjct: 346 EIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMI 405
Query: 394 --PFQPNPIVLRALLSASS----------IHDAKYQDGVGNEVRRR 427
+PN + ++L A S I D + G G++ R R
Sbjct: 406 ESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR 451
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 162/470 (34%), Positives = 252/470 (53%), Gaps = 7/470 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
++H +I +GL+ + ++ LV + +++ AR I +V + W LI GYA
Sbjct: 169 KVHMEIVEAGLELEPRVGTSLVGM--YAKCGDISKARVIFDRLPEKNV-VTWTLLIAGYA 225
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ A+ + M++ + P + T+ +L+ C + L G +V + +SG +++
Sbjct: 226 QQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELW 285
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N+L+ Y C +A K+F D+ R VV+W ++T + + EA+ F +M+ G
Sbjct: 286 VVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQG 345
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+PD+ T VL++C+ L GK +H QL+ G L+ L +AL+ MYAKCG++ A
Sbjct: 346 IKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDAS 405
Query: 286 LLFSRMEEINVWTWSAMILG-LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA 344
L+F++M E NV W+A+I G AQHG EALE F MK I P+ VTF VL AC H
Sbjct: 406 LVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHV 465
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRA 404
G+VE+G ++F M +GIKPM HY D+L RAGHL+EA I++MPF P P V A
Sbjct: 466 GLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGA 525
Query: 405 LLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKN 464
LLSA +H + G +L+L+P V +++ YA G +E VR+ M+
Sbjct: 526 LLSACRVHSDVER---GERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEK 582
Query: 465 VGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ K G SW+E+ G +H F+ S E IY L L +K + +
Sbjct: 583 RDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGY 632
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 159/291 (54%), Gaps = 7/291 (2%)
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+ R +EA+ + M +G + + +L+ CA + L +G +V A + KSG+ + Y
Sbjct: 25 TGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYL 84
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
N L+ Y C DA +VFD + +R++VSW +I V EA + MK G
Sbjct: 85 ENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGC 144
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
+PD+ T + +L+A T L LG+ VH++++E G L ++GT+L+ MYAKCG + AR+
Sbjct: 145 KPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARV 204
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
+F R+ E NV TW+ +I G AQ G + ALEL M+ + ++PN +TF +L C
Sbjct: 205 IFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAA 264
Query: 347 VEDG---YRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+E G +RY ++ +G + + +++ + + G L+EA ++P
Sbjct: 265 LEHGKKVHRYI--IQSGYGRELWVV--NSLITMYCKCGGLEEARKLFSDLP 311
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 182/379 (48%), Gaps = 10/379 (2%)
Query: 34 FLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
L+ C + L Q +HA I SG+Q + + L+ + +LT AR + + +
Sbjct: 53 LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSM--YAKCGSLTDARRVF-DSIR 109
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
D + W +I + ++ EA + MK G KP + T+ +L A L G +
Sbjct: 110 DRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQK 169
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
V + ++GL+ + +LV Y C A +FD + E++VV+W ++I +
Sbjct: 170 VHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQ 229
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
+ A+ M+ P++ T +L CT L GK VH +I+ G + +
Sbjct: 230 VDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNS 289
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
LI MY KCG + AR LFS + +V TW+AM+ G AQ G+ +EA+ LF M+ I P+
Sbjct: 290 LITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPD 349
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT-MADILARAGHLKEAYTF 389
+TF VL +C+ +++G R ++ VH + ++ + + + A+ G + +A +
Sbjct: 350 KMTFTSVLTSCSSPAFLQEGKRIHQQL--VHAGYNLDVYLQSALVSMYAKCGSMDDA-SL 406
Query: 390 IMNMPFQPNPIVLRALLSA 408
+ N + N + A+++
Sbjct: 407 VFNQMSERNVVAWTAIITG 425
>gi|222631730|gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japonica Group]
Length = 551
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 166/517 (32%), Positives = 269/517 (52%), Gaps = 45/517 (8%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
++ L+ C + + L ++H + + + + ++V C ++ + +T+A + +
Sbjct: 18 MARLRACVTFRDLLRVHGHVVRLRISQSSYLATQIVHLC--NAHRRVTHAARVFAQVRDP 75
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTE-------FTYPFVLKACAEISG 144
++ + N +I+ YA + + R+AV V+I M R P + FTYPF+LKAC +
Sbjct: 76 NLHLH-NAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAA 134
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L G QV +V +SG DS N+L+ Y A KVFD+M ER VVSWN++I+
Sbjct: 135 LELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISA 194
Query: 205 CVE-------------------NLWLGEAVGY------------FVKMKDLGFEPDETTM 233
W GY F M+ GFEPD+ ++
Sbjct: 195 HARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSI 254
Query: 234 LVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEE 293
+ VL AC +LG L LG+W++ G + + + AL++MYAKCG + A LF M +
Sbjct: 255 VAVLPACAQLGTLELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMAD 314
Query: 294 INVWTWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGMVEDGYR 352
+V +WS +I GLA HG A EA+ LF+ M K + PN +TF+G+L AC++AG+V++G
Sbjct: 315 KDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLS 374
Query: 353 YFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
+F M V+G++P HY + D+L R+G ++ A + +MP + V +LLSA H
Sbjct: 375 HFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSH 434
Query: 413 DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKG 472
+ E RL+ELEP NLV++AN YA W V++ R+ +++ ++K G
Sbjct: 435 GDVDTAVLAAE---RLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPG 491
Query: 473 MSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
S +E+G + F +G EL G+ +L+ L H+
Sbjct: 492 CSLIEVGNVVREFVAGEGLSSELGGLAGVLDILASHL 528
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 172/526 (32%), Positives = 269/526 (51%), Gaps = 67/526 (12%)
Query: 26 SKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
S+ CL+ C S + + QI A I + L + + +L+ C ++ +L YAR +
Sbjct: 3 SRELHCLALFSKCKSLRTVKQIQALIFKTCLNSYPLVSGKLLLHCAVTLPDSLHYARRLF 62
Query: 86 CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIK-PTEFTYPFVLKACAEISG 144
+ N V + +N LIRG + SD P A+ +F++M+R+ + P F++ F+LKA A
Sbjct: 63 LDIRNPDVFM-YNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRA 121
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGS---------------------------- 176
L G+Q+ GLDS ++ L+ Y
Sbjct: 122 LTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAA 181
Query: 177 ---CRRKRDACKVFDDMCERSVVSWNVII----------------------------TVC 205
C +DA +VF M R++ SWN+++ T+
Sbjct: 182 CFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMI 241
Query: 206 V---ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV 262
V N +A +F +++ G P+E ++ VLSAC + G G+ +H + + G +
Sbjct: 242 VGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFL 301
Query: 263 LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM 322
+ ALID Y+KCG + ARL+F M + +W+AMI G+A HGY EEA+ LF+ M
Sbjct: 302 QIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEM 361
Query: 323 KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGH 382
+ S+I P+ +TF+ +L AC+HAG+V+ G YF M + +GI+P+ HY M D+ RAG
Sbjct: 362 EESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGK 421
Query: 383 LKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIV 442
L++AY F+ MP PN IV R LL A SIH Y G +V+R+L EL+P S + V++
Sbjct: 422 LQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAG---QVKRQLSELDPENSGDHVLL 478
Query: 443 ANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
+N YA G W+ V+ +RR M + LKK G S +E+ I+ F +G
Sbjct: 479 SNIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRIIYSFVAG 524
>gi|125552488|gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
Length = 551
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 166/517 (32%), Positives = 269/517 (52%), Gaps = 45/517 (8%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
++ L+ C + + L ++H + + + + ++V C ++ + +T+A + +
Sbjct: 18 MARLRACVTFRDLLRVHGHVVRLRISQSSYLATQIVHLC--NAHRRVTHAARVFAQVRDP 75
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTE-------FTYPFVLKACAEISG 144
++ + N +I+ YA + + R+AV V+I M R P + FTYPF+LKAC +
Sbjct: 76 NLHL-HNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAA 134
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L G QV +V +SG DS N+L+ Y A KVFD+M ER VVSWN++I+
Sbjct: 135 LELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISA 194
Query: 205 CVE-------------------NLWLGEAVGY------------FVKMKDLGFEPDETTM 233
W GY F M+ GFEPD+ ++
Sbjct: 195 HARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSI 254
Query: 234 LVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEE 293
+ VL AC +LG L LG+W++ G + + + AL++MYAKCG + A LF M +
Sbjct: 255 VAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMAD 314
Query: 294 INVWTWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGMVEDGYR 352
+V +WS +I GLA HG A EA+ LF+ M K + PN +TF+G+L AC++AG+V++G
Sbjct: 315 KDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLS 374
Query: 353 YFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
+F M V+G++P HY + D+L R+G ++ A + +MP + V +LLSA H
Sbjct: 375 HFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSH 434
Query: 413 DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKG 472
+ E RL+ELEP NLV++AN YA W V++ R+ +++ ++K G
Sbjct: 435 GDVDTAVLAAE---RLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPG 491
Query: 473 MSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
S +E+G + F +G EL G+ +L+ L H+
Sbjct: 492 CSLIEVGNVVREFVAGEGLSSELGGLAGVLDILASHL 528
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 173/536 (32%), Positives = 279/536 (52%), Gaps = 47/536 (8%)
Query: 8 TTNHIFPPKPSNCNSDLLSKARQCLSFLKLCC------SKKHLYQIHAQIQVSGLQNDAQ 61
TT PP P+ + S +S +L + HL QIHA + GL +
Sbjct: 4 TTLFTIPPSPATGSPPTTSTTHHFISTNRLAVLIDKSKTISHLLQIHAVLFRHGLDHHPI 63
Query: 62 ILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMK 121
+ +L R + +S L Y+ ++ N SV W +I G+A +A+ + M
Sbjct: 64 LNFKLQR--SYASLGRLDYSVALFGRTQNPSVFF-WTAIIHGHALRGLHEQALNFYAQML 120
Query: 122 RRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYG------ 175
+G++P FT+ +LK C + G + + K G DSD+Y L+ Y
Sbjct: 121 TQGVEPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVV 176
Query: 176 ---------------------SCRRKR---DACKV-FDDMCERSVVSWNVIITVCVENLW 210
+C K DA +V FD M ER V WNV+I +N
Sbjct: 177 SAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGM 236
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
EA+ F +M +P+E T+L VLSAC +LG L G+WVH + G N +GTA
Sbjct: 237 PNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTA 296
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
L+DMY+KCG++ ARL+F ++++ +V W++MI+G A HG+++EAL+LF +M + P
Sbjct: 297 LVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPT 356
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
+TF+G+L AC H+G V +G+ F++M+ +GI+P HY M ++L RAGH+++AY +
Sbjct: 357 NITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELV 416
Query: 391 MNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVG 450
NM +P+P++ LL A +H + +G ++ L++ S ++++N YA VG
Sbjct: 417 KNMNIEPDPVLWGTLLGACRLHG---KIALGEKIVELLVDQNLANSGTYILLSNIYAAVG 473
Query: 451 MWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
W+ V+ +R MK+ G+KK G S +E+ +H F +G + + IY +LE +N
Sbjct: 474 NWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEIN 529
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 177/516 (34%), Positives = 272/516 (52%), Gaps = 40/516 (7%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
++ LK C L +IHA + L ++ +++ C + +++YA + ++
Sbjct: 14 ITSLKNCFKITQLKKIHAHVVKLSLSQSNFLVTKMLDSC--DNLGHVSYATLLFKQLLHP 71
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDM---KRRGIKPTEFTYPFVLKACAEISGLNEG 148
++ +N +IR YA + A+ VF+ M + P +FT+PFV+K+C I G
Sbjct: 72 NI-FTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLG 130
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII------ 202
MQV V K G D T N L+ Y +ACKVF++M R V+SWN +I
Sbjct: 131 MQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKL 190
Query: 203 -----------TVCVENL--WL------------GEAVGYFVKMKDLGFEPDETTMLVVL 237
+ V + W G+A+ F +M+ +G EPDE +++ VL
Sbjct: 191 GQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVL 250
Query: 238 SACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVW 297
AC +LG L +GKW+H+ + G + + ALI+MYAKCG + A LF ++ E +V
Sbjct: 251 PACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVI 310
Query: 298 TWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM 357
+WS MI GLA HG EA++LF M ++PN +TFLGVL AC+H G+ ++G +YF M
Sbjct: 311 SWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVM 370
Query: 358 EHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQ 417
+ I+P HY + D+L R+G L +A I MP +P+ + +LLS+ IH Q
Sbjct: 371 SASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIH-RNLQ 429
Query: 418 DGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVE 477
V ++L+ELEP S N V++AN YAE G WE VSN+R+ ++N +KK G S +E
Sbjct: 430 IAV--IAVKQLMELEPEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRIKKTPGSSSIE 487
Query: 478 LGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLN 513
+ + F S DS+ ++ ILE L L+ N
Sbjct: 488 VNNVVQEFVSSDDSKPFSQEVFWILEGLALNQTRTN 523
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 11/263 (4%)
Query: 125 IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDAC 184
I+ E Y LK C +I+ L ++ A+V K L + ++ + A
Sbjct: 6 IRELENRYITSLKNCFKITQLK---KIHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSYAT 62
Query: 185 KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE---PDETTMLVVLSACT 241
+F + ++ ++N II N A+ FV+M PD+ T V+ +CT
Sbjct: 63 LLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCT 122
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
+ LG VH + + G +C ALIDMY K G + A +F M +V +W++
Sbjct: 123 GILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNS 182
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
+I G + G A ELF +M +I V++ ++ G D F EM+ V
Sbjct: 183 LIFGYVKLGQMNSARELFDDMPVRTI----VSWTTMITGYGRMGCYGDALDVFREMQMV- 237
Query: 362 GIKPMRIHYHTMADILARAGHLK 384
GI+P I + A+ G L+
Sbjct: 238 GIEPDEISIIAVLPACAQLGALE 260
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 257/470 (54%), Gaps = 9/470 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIH +I +G D ++ L+ S L AR++ +V + WN +I Y
Sbjct: 428 QIHDRIIKAGYITDDRVRTALLSMYAKCGS--LMDARNVFERISKQNV-VAWNAMITAYV 484
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
++ AV F + + GIKP T+ +L C L G VQ+ + ++G +SD++
Sbjct: 485 QHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLH 544
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N LV + +C A +F+DM ER +VSWN II V++ A YF M++ G
Sbjct: 545 IRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESG 604
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+PD+ T +L+AC L+ G+ +H + E + +GT LI MY KCG++ A
Sbjct: 605 VKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAH 664
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
L+F + + NV++W++MI G AQHG +EALELF M+ + P+++TF+G L AC HAG
Sbjct: 665 LVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAG 724
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
++++G +F M+ + I+P HY M D+ RAG L EA FI M +P+ + AL
Sbjct: 725 LIKEGLHHFESMKDFN-IEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGAL 783
Query: 406 LSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKN 464
L A +H D + + +V ++ LEL+P VI++N YA GMW++V+ +R+ M +
Sbjct: 784 LGACQVHLDVE----LAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLD 839
Query: 465 VGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
G+ K G SW+E+ G +H F S + ++ I+ L L++ MK L +
Sbjct: 840 RGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLGY 889
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 198/393 (50%), Gaps = 9/393 (2%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S L+LC K+L +IH I+ S +Q D + L+ + N A+ I + +
Sbjct: 109 SLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISM--YAKCGNTNSAKQIF-DEM 165
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
D WN L+ GY R EA + M + G+KP ++T+ ++L ACA+ +++G
Sbjct: 166 PDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGG 225
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
++ + + +G D+D++ L+ + C DA KVF+++ R +++W +IT +
Sbjct: 226 ELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHR 285
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+A F M++ G +PD+ + +L AC L GK VH ++ E G +GT
Sbjct: 286 QFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGT 345
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
AL+ MY KCG++ A +F+ ++ NV +W+AMI G AQHG EEA F+ M S I P
Sbjct: 346 ALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEP 405
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
N VTF+ +L AC+ ++ G + + I R+ + + A+ G L +A
Sbjct: 406 NRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRT-ALLSMYAKCGSLMDARNV 464
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGN 422
+ Q N + A+++A H+ KY + V
Sbjct: 465 FERISKQ-NVVAWNAMITAYVQHE-KYDNAVAT 495
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 187/407 (45%), Gaps = 14/407 (3%)
Query: 32 LSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
+S LK C + L Q +HA+++ GL + + L+ T S + A + N
Sbjct: 310 VSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGS--MEDALEVF-NL 366
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
V + W +I G+A R EA F M GI+P T+ +L AC+ S L +G
Sbjct: 367 VKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQG 426
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
Q+ + K+G +D L+ Y C DA VF+ + +++VV+WN +IT V++
Sbjct: 427 RQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQH 486
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
AV F + G +PD +T +L+ C L LGKWV +I G + +
Sbjct: 487 EKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIR 546
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
AL+ M+ CG + A LF+ M E ++ +W+ +I G QHG + A + F M+ S +
Sbjct: 547 NALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVK 606
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
P+ +TF G+L AC + +G R H + + + + + + G + +A+
Sbjct: 607 PDQITFTGLLNACASPEALTEG-RRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHL 665
Query: 389 FIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
N+P + + S +S+ Q G G E +++ G
Sbjct: 666 VFHNLP-------KKNVYSWTSMITGYAQHGRGKEALELFCQMQQEG 705
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 146/277 (52%), Gaps = 10/277 (3%)
Query: 84 ILCNYVNDSVP----------IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYP 133
I C V+D++ I W ++I G A + ++A +F M+ G++P + +
Sbjct: 251 IKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFV 310
Query: 134 FVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER 193
+LKAC L +G +V A + + GLD+++Y L+ Y C DA +VF+ + R
Sbjct: 311 SLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGR 370
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
+VVSW +I ++ + EA +F KM + G EP+ T + +L AC+ L G+ +H
Sbjct: 371 NVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIH 430
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
++I+ G + + ++ TAL+ MYAKCG++ AR +F R+ + NV W+AMI QH +
Sbjct: 431 DRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYD 490
Query: 314 EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
A+ F + I P+ TF +L C +E G
Sbjct: 491 NAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELG 527
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 188/402 (46%), Gaps = 36/402 (8%)
Query: 62 ILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMK 121
IL+E F ++S + +Y++ +V+ N + + + + EA+ V + +
Sbjct: 37 ILEEFDTFRLYTTSFSGSYSKGQGNEFVDIKNTQRANAFLNRLSKAGQLSEAMLVLLSVD 96
Query: 122 RRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKR 181
I+ TY +L+ C + L +G ++ ++ S + D++ N L+ Y C
Sbjct: 97 SPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTN 156
Query: 182 DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
A ++FD+M ++ V SWN+++ V++ EA +M G +PD+ T + +L+AC
Sbjct: 157 SAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACA 216
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
+ N+ G + ++ G + +GTALI+M+ KCG V A +F+ + ++ TW++
Sbjct: 217 DAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTS 276
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHV- 360
MI GLA+H ++A LF M+ + P+ V F+ +L ACNH +E G R M+ V
Sbjct: 277 MITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVG 336
Query: 361 --------HGIKPMRIHYHTMADIL---------------------ARAGHLKEAYTFIM 391
+ M +M D L A+ G ++EA+ F
Sbjct: 337 LDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFN 396
Query: 392 NM---PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLE 430
M +PN + ++L A S A Q G ++ R+++
Sbjct: 397 KMIESGIEPNRVTFMSILGACSRPSALKQ---GRQIHDRIIK 435
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 163/486 (33%), Positives = 260/486 (53%), Gaps = 10/486 (2%)
Query: 32 LSFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
+S L C S L QI I +G +D ++ L+ S L A +
Sbjct: 417 MSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGS--LKDAHRVFEKI 474
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
+V + WN +I Y ++ A+ F + + GIKP T+ +L C L G
Sbjct: 475 SKQNV-VAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELG 533
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
V + K+GL+SD++ +N LV + +C A +F+DM +R +VSWN II V++
Sbjct: 534 KWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQH 593
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
A YF M++ G +PD+ T +L+AC L+ G+ +H + E + +G
Sbjct: 594 GKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVG 653
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
T LI MY KCG++ A +F ++ + NV++W++MI G AQHG +EALELF M+ +
Sbjct: 654 TGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVK 713
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
P+++TF+G L AC HAG++E+G +F M+ + I+P HY M D+ RAG L EA
Sbjct: 714 PDWITFVGALSACAHAGLIEEGLHHFQSMKEFN-IEPRMEHYGCMVDLFGRAGLLNEAVE 772
Query: 389 FIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAE 448
FI+ M +P+ V ALL A +H + + ++ LEL+P + VI++N YA
Sbjct: 773 FIIKMQVEPDSRVWGALLGACQVH---LNVELAEKAAQKKLELDPNDNGVFVILSNIYAA 829
Query: 449 VGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLH 508
GMW++V+ +R+ M + G+ K G SW+E+ G +H FYS + + I+ LE L++
Sbjct: 830 AGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHME 889
Query: 509 MKVLNF 514
M+ L +
Sbjct: 890 MRQLGY 895
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 197/390 (50%), Gaps = 11/390 (2%)
Query: 29 RQCLS-FLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSI 84
RQ S L+LC K+L +I+ I+ SG+Q D + L+ + N A+ I
Sbjct: 110 RQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINM--YAKCGNTISAKQI 167
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
+ V WN L+ GY EA + M + +KP + T+ +L ACA+
Sbjct: 168 FDDMREKDV-YSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARN 226
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
+++G ++ + K+G D+D++ L+ + C DA KVFD++ R +V+W +IT
Sbjct: 227 VDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITG 286
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
+ +A F +M++ G +PD+ + +L AC L GK VH ++ E G
Sbjct: 287 LARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTE 346
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+GTA++ MY KCG++ A +F ++ NV +W+AMI G AQHG +EA F+ M
Sbjct: 347 IYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIE 406
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYR-YFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
S I PN VTF+ +L AC+ ++ G + H +E +G R+ + + A+ G L
Sbjct: 407 SGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDD-RVRT-ALLSMYAKCGSL 464
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHD 413
K+A+ + Q N + A+++A H+
Sbjct: 465 KDAHRVFEKISKQ-NVVAWNAMITAYVQHE 493
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 202/444 (45%), Gaps = 50/444 (11%)
Query: 32 LSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
+S L+ C + L Q +HA+++ G + + ++ T S + A + +
Sbjct: 316 VSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGS--MEDALEVF-DL 372
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
V + W +I G+A R EA F M GI+P T+ +L AC+ S L G
Sbjct: 373 VKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRG 432
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
Q+Q ++ ++G SD L+ Y C +DA +VF+ + +++VV+WN +IT V++
Sbjct: 433 QQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQH 492
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
A+ F + G +P+ +T +L+ C +L LGKWVH +++ G + +
Sbjct: 493 EQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVS 552
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
AL+ M+ CG + A+ LF+ M + ++ +W+ +I G QHG + A + F M+ S I
Sbjct: 553 NALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIK 612
Query: 329 PNYVTFLGVLCACN-----------HA------------------------GMVEDGYRY 353
P+ +TF G+L AC HA G +ED ++
Sbjct: 613 PDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQV 672
Query: 354 FHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP---FQPNPIVLRALLSASS 410
FH++ K + +M A+ G KEA M +P+ I LSA +
Sbjct: 673 FHKLP-----KKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACA 727
Query: 411 IHDAKYQDGVGNEVRRRLLELEPR 434
H ++G+ + + +EPR
Sbjct: 728 -HAGLIEEGLHHFQSMKEFNIEPR 750
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 156/310 (50%), Gaps = 5/310 (1%)
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D++P + W ++I G A R ++A +F M+ G++P + + +L+AC
Sbjct: 268 VFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEA 327
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L +G +V A + + G D+++Y ++ Y C DA +VFD + R+VVSW +I
Sbjct: 328 LEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAG 387
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
++ + EA +F KM + G EP+ T + +L AC+ L G+ + +IE G +
Sbjct: 388 FAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSD 447
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
++ TAL+ MYAKCG++ A +F ++ + NV W+AMI QH + AL F +
Sbjct: 448 DRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLK 507
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
I PN TF +L C + +E G ++ H + G++ + + + G L
Sbjct: 508 EGIKPNSSTFTSILNVCKSSDSLELG-KWVHFLIMKAGLESDLHVSNALVSMFVNCGDLM 566
Query: 385 EAYTFIMNMP 394
A +MP
Sbjct: 567 SAKNLFNDMP 576
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 188/406 (46%), Gaps = 45/406 (11%)
Query: 65 ELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRG 124
E +R T S S R ++ + D+ N ++ + + + EA+ V +
Sbjct: 48 ETLRMLTTSFSGRCPKGRCVVFADIKDTQKA--NAVLNRLSKAGQFNEAMQVLERVDSSH 105
Query: 125 IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDAC 184
I+ TY +L+ C + L +G ++ ++ KSG+ D++ N L+ Y C A
Sbjct: 106 IQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAK 165
Query: 185 KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELG 244
++FDDM E+ V SWN+++ V++ EA +M +PD+ T + +L+AC +
Sbjct: 166 QIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADAR 225
Query: 245 NLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMIL 304
N+ G+ ++ +++ G + +GTALI+M+ KCG +G A +F + ++ TW++MI
Sbjct: 226 NVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMIT 285
Query: 305 GLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHV---- 360
GLA+HG ++A LF M+ + P+ V F+ +L ACNH +E G + M+ V
Sbjct: 286 GLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDT 345
Query: 361 -----HGIKPMRIHYHTMADIL---------------------ARAGHLKEAYTFIMNM- 393
I M +M D L A+ G + EA+ F M
Sbjct: 346 EIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMI 405
Query: 394 --PFQPNPIVLRALLSASS----------IHDAKYQDGVGNEVRRR 427
+PN + ++L A S I D + G G++ R R
Sbjct: 406 ESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR 451
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 164/466 (35%), Positives = 247/466 (53%), Gaps = 9/466 (1%)
Query: 48 HAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWS 107
H ++ GL ND + +V + AR + + + + + WN+L+ GYA
Sbjct: 140 HCEVFKLGLDNDHHTVNSMVTMYFRCGENGV--ARKVF-DEITEKDLVSWNSLLSGYAKL 196
Query: 108 DRPREAVWVFIDMKRR-GIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
REAV VF ++ G +P E + VL AC E+ L G V+ V + G+ + Y
Sbjct: 197 GFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYI 256
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
+ L+ Y C + ++FD M R ++WN I+ +N EA+ F MK+ G
Sbjct: 257 GSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGV 316
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
+P++ T+ VLSAC +G L LGK + RG + + TALIDMYAKCG++ A+
Sbjct: 317 DPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQR 376
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS--SISPNYVTFLGVLCACNHA 344
+F+ M N +W+AMI LA HG A+EAL LF M + S PN +TF+ +L AC HA
Sbjct: 377 VFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHA 436
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRA 404
G+V++GYR F M + G+ P HY M D+L+RAGHL EA+ I MP +P+ + L A
Sbjct: 437 GLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGA 496
Query: 405 LLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKN 464
L SA K +G V + LLEL+P S N +I + Y + MW+ + +R M+
Sbjct: 497 LHSACQ---RKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRE 553
Query: 465 VGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
G+ K G SW+E+G + F SG ++ + I++ L +K
Sbjct: 554 NGVTKTPGCSWIEVGNQLREFLSGDGLTLDSIDVRNIIDLLYEELK 599
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 132/384 (34%), Positives = 202/384 (52%), Gaps = 12/384 (3%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LS LK C S K L QIH Q + + +L + + S K+ TY+ I +
Sbjct: 25 LSLLKQCPSTKTLQQIHTQFTIHSIHKPNHLLSQSI------SLKDFTYSTLIFSHITPH 78
Query: 92 SVPIPWNNLIRGYA--WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+N ++R W D P + ++ MK I P FT+PFV ACA + +
Sbjct: 79 PNDYAFNIMLRATTTTWHDYPL-TLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMAR 137
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
V K GLD+D +T N++V Y C A KVFD++ E+ +VSWN +++ +
Sbjct: 138 LAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLG 197
Query: 210 WLGEAVGYFVKMK-DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+ EAV F +++ + GFEPDE +++ VL AC ELG+L LG+WV ++ERG +N +G
Sbjct: 198 FAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIG 257
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
+ALI MY+KCG + +R +F M + TW+A I AQ+G A+EA+ LF +MK + +
Sbjct: 258 SALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVD 317
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
PN VT VL AC G ++ G + H G++ + D+ A+ G L+ A
Sbjct: 318 PNKVTLTAVLSACASIGALDLGKQMDEYATH-RGLQHDIFVATALIDMYAKCGSLESAQR 376
Query: 389 FIMNMPFQPNPIVLRALLSASSIH 412
+MP + N A++SA + H
Sbjct: 377 VFNDMP-RKNDASWNAMISALASH 399
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 173/509 (33%), Positives = 270/509 (53%), Gaps = 38/509 (7%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
++ L+ C L +IHA I L ++ +++ C + ++ YA I N
Sbjct: 11 VTTLRNCPKIAELKKIHAHIVKLSLSQSNFLVTKMLDLC--DNLSHVDYATMIFQQLENP 68
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
+V +N +IR Y + + A+ VF M + P +FT+PFV+K+CA + G Q
Sbjct: 69 NV-FSYNAIIRTYTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVIKSCAGLLCRRLGQQ 127
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII-------- 202
V A+V K G + T N L+ Y C A +V+++M ER VSWN +I
Sbjct: 128 VHAHVCKFGPKTHAITENALIDMYTKCGDMSGAYQVYEEMTERDAVSWNSLISGHVRLGQ 187
Query: 203 -------------------TVCVENLWLG----EAVGYFVKMKDLGFEPDETTMLVVLSA 239
T + G +A+G F +M+ +G EPDE +++ VL A
Sbjct: 188 MKSAREVFDEMPCRTIVSWTTMINGYARGGCYADALGIFREMQVVGIEPDEISVISVLPA 247
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C +LG L +GKW+H + G + N + AL++MYAKCG + A LF++M E +V +W
Sbjct: 248 CAQLGALEVGKWIHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWGLFNQMIEKDVISW 307
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
S MI GLA HG A+ +F +M+ + ++PN VTF+GVL AC HAG+ +G RYF M
Sbjct: 308 STMIGGLANHGKGYAAIRVFEDMQKAGVTPNGVTFVGVLSACAHAGLWNEGLRYFDVMRV 367
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
+ ++P HY + D+L R+G +++A I+ MP QP+ +LLS+ IH +
Sbjct: 368 DYHLEPQIEHYGCLVDLLGRSGQVEQALDTILKMPMQPDSRTWNSLLSSCRIH---HNLE 424
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
+ +LL+LEP S N V++AN YA++ WE VSNVR+ +++ +KK G S +E+
Sbjct: 425 IAVVAMEQLLKLEPEESGNYVLLANIYAKLDKWEGVSNVRKLIRSKRIKKTPGCSLIEVN 484
Query: 480 GSIHRFYSGYDSQVELAGIYQILETLNLH 508
+ F SG DS+ ++ IL+ L LH
Sbjct: 485 NLVQEFVSGDDSKPFSQEVFWILKGLTLH 513
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 185/542 (34%), Positives = 280/542 (51%), Gaps = 69/542 (12%)
Query: 26 SKARQCLSFL-KLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSI 84
S +RQ S L + C + L QIHA + V G ++ L+EL+ +++ S + YA +
Sbjct: 10 SPSRQQRSQLWRSCTTIGTLKQIHASMIVKGFNSNTSALRELIYASSIAISGTMAYAHQL 69
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
++ + WN +IRG A S P A+ ++ M+ ++P +FT+PFVLKAC +
Sbjct: 70 F-PHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTRLCW 128
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVR--------------FYGSCRR----------- 179
+ G V V + G +S+ + N L+ F GS +R
Sbjct: 129 VKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAG 188
Query: 180 --KRD----ACKVFDDMCERSVVSWNVIITVCVEN-------------------LWLGEA 214
+R A ++FD+M + +VSWNV+IT + W
Sbjct: 189 YARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMI 248
Query: 215 VGY------------FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG-T 261
GY F +M+ +G PDE TML +LSACT+LG+L G+ +H + E G
Sbjct: 249 AGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFR 308
Query: 262 VLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSN 321
L+ LG ALIDMYAKCG++ A +F M E +V TW++++ GLA HG+AE+++ LF+
Sbjct: 309 DLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTE 368
Query: 322 MKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAG 381
M+ I P+ +TF+GVL AC+HAG VE+G +YF M + I+P HY M D+L RAG
Sbjct: 369 MRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAG 428
Query: 382 HLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVI 441
L EA+ FI M +PN IV R LL A IH +G +LL++ S + V+
Sbjct: 429 LLNEAFDFIDTMKIEPNAIVWRTLLGACRIHG---NVELGRRANMQLLKMRHDESGDYVL 485
Query: 442 VANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQI 501
++N YA G W+ V VR+ M + G++K G S +E G + + +DS+ +L
Sbjct: 486 LSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLIE-GDNKALMHFLFDSKPKLNSRKPF 544
Query: 502 LE 503
LE
Sbjct: 545 LE 546
>gi|297724167|ref|NP_001174447.1| Os05g0439300 [Oryza sativa Japonica Group]
gi|46981301|gb|AAT07619.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|215769333|dbj|BAH01562.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676403|dbj|BAH93175.1| Os05g0439300 [Oryza sativa Japonica Group]
Length = 551
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 166/517 (32%), Positives = 269/517 (52%), Gaps = 45/517 (8%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
++ L+ C + + L ++H + + + + ++V C ++ + +T+A + +
Sbjct: 18 MARLRACVTFRDLLRVHGHVVRLRISQSSYLATQIVHLC--NAHRRVTHAARVFAQVRDP 75
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTE-------FTYPFVLKACAEISG 144
++ + N +I+ YA + + R+AV V+I M R P + FTYPF+LKAC +
Sbjct: 76 NLHLH-NAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAA 134
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L G QV +V +SG DS N+L+ Y A KVFD+M ER VVSWN++I+
Sbjct: 135 LELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISA 194
Query: 205 CVE-------------------NLWLGEAVGY------------FVKMKDLGFEPDETTM 233
W GY F M+ GFEPD+ ++
Sbjct: 195 HARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSI 254
Query: 234 LVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEE 293
+ VL AC +LG L LG+W++ G + + + AL++MYAKCG + A LF M +
Sbjct: 255 VAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMAD 314
Query: 294 INVWTWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGMVEDGYR 352
+V +WS +I GLA HG A EA+ LF+ M K + PN +TF+G+L AC++AG+V++G
Sbjct: 315 KDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLS 374
Query: 353 YFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
+F M V+G++P HY + D+L R+G ++ A + +MP + V +LLSA H
Sbjct: 375 HFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSH 434
Query: 413 DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKG 472
+ E RL+ELEP NLV++AN YA W V++ R+ +++ ++K G
Sbjct: 435 GDVDTAVLAAE---RLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPG 491
Query: 473 MSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
S +E+G + F +G EL G+ +L+ L H+
Sbjct: 492 CSLIEVGNVVREFVAGEGLSSELGGLAGVLDILASHL 528
>gi|242076494|ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
gi|241939366|gb|EES12511.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
Length = 549
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 150/414 (36%), Positives = 226/414 (54%), Gaps = 4/414 (0%)
Query: 74 SSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYP 133
SS L R + + V + WN L+ G A R EA+ + M R G +P FT
Sbjct: 117 SSTALESVRKVFDEMIERDV-VSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLS 175
Query: 134 FVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER 193
VL AE + + G +V ++G D+DV+ ++L+ Y +C R + KVFD++ R
Sbjct: 176 SVLPIFAECADVKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR 235
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
+ WN ++ C +N + EA+G F +M G P T ++ C L +L GK +H
Sbjct: 236 DPILWNSVLAGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLH 295
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
+I G N + ++LIDMY KCG + A +F RM +V +W+AMI+G A HG A
Sbjct: 296 AYVIRGGFEDNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAR 355
Query: 314 EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
EAL LF M+ + PN++TFL VL AC+HAG+V+ G++YF M +GI P H +
Sbjct: 356 EALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAAL 415
Query: 374 ADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP 433
ADIL RAG L EAY FI M +P V LL A +H + EV ++++ELEP
Sbjct: 416 ADILGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHK---NTMLAEEVAKKIMELEP 472
Query: 434 RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYS 487
R + V+++N Y+ G W + +++R+ M+ G+KK SW+E+ +H F +
Sbjct: 473 RSIGSHVVLSNMYSASGRWNEAAHLRKSMRKKGMKKDPACSWIEVKNKLHVFVA 526
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 150/342 (43%), Gaps = 27/342 (7%)
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKR----RGIKPTEFTYPFVLKACAEISGLNEGM 149
P+ W + IR A R+A+ +F+ M+ R P + P LK+CA + G
Sbjct: 14 PLSWAHQIRMAAAQGHFRDAISLFLRMRACAAPRSSVPA--SLPAALKSCAALGLSALGA 71
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFY-------------------GSCRRKRDACKVFDDM 190
+ A +SG +D +T N L+ Y GS KVFD+M
Sbjct: 72 SLHALAIRSGAFADRFTANALLNLYCKLPCSYLHSTGVTSVGGTGSSTALESVRKVFDEM 131
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
ER VVSWN ++ C E EA+ KM GF PD T+ VL E ++ G
Sbjct: 132 IERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFAECADVKRGS 191
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
VH + G + +G++LIDMYA C + +F + + W++++ G AQ+G
Sbjct: 192 EVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPILWNSVLAGCAQNG 251
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
EEAL +F M + + P VTF ++ C + + G + H G +
Sbjct: 252 SVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFG-KQLHAYVIRGGFEDNVFIS 310
Query: 371 HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
++ D+ + G + A+ I + P+ + A++ ++H
Sbjct: 311 SSLIDMYCKCGEISIAH-HIFDRMCSPDVVSWTAMIMGYALH 351
>gi|224073108|ref|XP_002303975.1| predicted protein [Populus trichocarpa]
gi|222841407|gb|EEE78954.1| predicted protein [Populus trichocarpa]
Length = 508
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 165/492 (33%), Positives = 257/492 (52%), Gaps = 44/492 (8%)
Query: 53 VSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWS-DRPR 111
+ L D +L + C SS +YA S+ + + +NN+I+ + S P+
Sbjct: 3 LRALDTDNLLLSRFIHAC--SSLGFYSYAYSLFTSITHAPDIYLYNNIIKALSSSPTHPK 60
Query: 112 EAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLV 171
+++++ +++ G++P +++PF LKA S + G Q+ + + GL SD++ V
Sbjct: 61 ASIFLYNNIQLAGLRPDSYSFPFALKAVTRFSSIQTGRQLHSQSIRFGLHSDLHVLTAFV 120
Query: 172 RFYGS------CRRKR--------------------------DACK---VFDDMCERSVV 196
+ Y S C ++ D C +F+ M +R+V+
Sbjct: 121 QMYSSFGSGCICDARKMFDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLFERMPQRNVI 180
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
SW +IT + +A+ F +M+ EPDE MLV L+AC LG L LG+W+
Sbjct: 181 SWTALITGYAQANRPHDAIALFRRMQLENVEPDEIAMLVALTACARLGALELGEWIR-HY 239
Query: 257 IERGTVL--NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEE 314
I+R +L N L ALIDMYAK G + A +F M + TW+ MI GLA HG E
Sbjct: 240 IDRLGLLTTNIPLNNALIDMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALHGLGTE 299
Query: 315 ALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMA 374
ALE+FS M+ + + PN +TF+ +L AC+H G+V+ G YF+ M +GI+P HY M
Sbjct: 300 ALEMFSRMERARVKPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEHYGCMI 359
Query: 375 DILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPR 434
D+L RAGHLKEA T + MPF+PN ++ +LL+A + H +G + LLELEP
Sbjct: 360 DLLGRAGHLKEAQTLLAQMPFEPNAVIWGSLLAACNTHG---DPELGELALQHLLELEPD 416
Query: 435 GSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVE 494
S N +++N YA G W + VR+ M + G+KKM G S +E+ +H F +G S +
Sbjct: 417 NSGNYALLSNIYASRGRWNESRVVRKVMWDAGVKKMPGGSLIEVNNRVHEFIAGEISHSQ 476
Query: 495 LAGIYQILETLN 506
I ++L +N
Sbjct: 477 FDRIQEVLSKIN 488
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 171/471 (36%), Positives = 245/471 (52%), Gaps = 10/471 (2%)
Query: 46 QIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSIL-CNYVNDSVPIPWNNLIRG 103
QIHA I S +D ++ L + + + K+ AR + C D I WN +IRG
Sbjct: 251 QIHAHIVESEYHSDVRVSTALTKMYMKCGAFKD---AREVFECLSYRDV--IAWNTMIRG 305
Query: 104 YAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD 163
+ S + EA F M G+ P TY VL ACA GL G ++ A K GL SD
Sbjct: 306 FVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSD 365
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
V N L+ Y +DA +VFD M +R VVSW ++ + + E+ F +M
Sbjct: 366 VRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQ 425
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G + ++ T + VL AC+ L GK +H ++++ G + + + AL+ MY KCG+V
Sbjct: 426 QGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVED 485
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A +F M +V TW+ +I GL Q+G EAL+ + MK+ + PN TF+ VL AC
Sbjct: 486 AIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRV 545
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
+VE+G R F M +GI P HY M DILARAGHL+EA I+ +P +P+ +
Sbjct: 546 CNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWG 605
Query: 404 ALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMK 463
ALL+A IH +G L+LEP+ + V ++ YA GMW V+ +R+FMK
Sbjct: 606 ALLAACRIH---CNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMK 662
Query: 464 NVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
G+KK G SW+E+ G +H F + S IY LETL MK L +
Sbjct: 663 ERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLGY 713
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 178/390 (45%), Gaps = 8/390 (2%)
Query: 5 PVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILK 64
P ++ P + D + + C+ L K Q+H I G++ + I
Sbjct: 12 PADVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGK----QVHEHILRCGVKPNVYITN 67
Query: 65 ELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRG 124
L++ S N AR + + N SV + WN +I GYA +EA +F M++
Sbjct: 68 TLLKLYAHCGSVN--EARQLFDKFSNKSV-VSWNVMISGYAHRGLAQEAFNLFTLMQQER 124
Query: 125 IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDAC 184
++P +FT+ +L AC+ + LN G ++ V ++GL +D N L+ Y C RDA
Sbjct: 125 LEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDAR 184
Query: 185 KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELG 244
+VFD M R VSW + E+ + E++ + M P T + VLSAC L
Sbjct: 185 RVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLA 244
Query: 245 NLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMIL 304
L GK +H ++E + ++ TAL MY KCGA AR +F + +V W+ MI
Sbjct: 245 ALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIR 304
Query: 305 GLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIK 364
G G EEA F M ++P+ T+ VL AC G + G + H G+
Sbjct: 305 GFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARG-KEIHARAAKDGLV 363
Query: 365 PMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ + ++ ++AG +K+A MP
Sbjct: 364 SDVRFGNALINMYSKAGSMKDARQVFDRMP 393
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 161/315 (51%), Gaps = 6/315 (1%)
Query: 32 LSFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
+S L C S L +IH ++ +GL ND + L+ + ++ AR + +
Sbjct: 133 VSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISM--YAKCGSVRDARRVF-DA 189
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
+ + W L YA S E++ + M + ++P+ TY VL AC ++ L +G
Sbjct: 190 MASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKG 249
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
Q+ A++ +S SDV + L + Y C +DA +VF+ + R V++WN +I V++
Sbjct: 250 KQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDS 309
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
L EA G F +M + G PD T VLSAC G L+ GK +H + + G V + + G
Sbjct: 310 GQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFG 369
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
ALI+MY+K G++ AR +F RM + +V +W+ ++ A E+ F M +
Sbjct: 370 NALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVK 429
Query: 329 PNYVTFLGVLCACNH 343
N +T++ VL AC++
Sbjct: 430 ANKITYMCVLKACSN 444
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 159/462 (34%), Positives = 242/462 (52%), Gaps = 19/462 (4%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIH Q+ +G Q + + L+ + L +A I + V + W +I GY
Sbjct: 459 QIHTQVLKTGFQFNVYVSSVLIDM--YAKHGKLDHALKIFRRLKENDV-VSWTAMIAGYT 515
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
D+ EA+ +F +M+ +GIK + + ACA I L++G Q+ A SG D+
Sbjct: 516 QHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLS 575
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N LV Y C + R+A FD + + VSWN +++ ++ + EA+ F +M G
Sbjct: 576 IGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAG 635
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
E + T +SA + N+ +GK +H + + G ++ ALI +YAKCG
Sbjct: 636 LEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGT----- 690
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
I+ +W++MI G +QHG EAL+LF +MK + PN+VTF+GVL AC+H G
Sbjct: 691 --------IDDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVG 742
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+V++G YF M H + P HY + D+L R+G L A F+ MP QP+ +V R L
Sbjct: 743 LVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTL 802
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
LSA ++H K D +G LLELEP+ S V+V+N YA G W+ R+ MK+
Sbjct: 803 LSACNVH--KNID-IGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDR 859
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNL 507
G+KK G SWVE+ S+H F++G + IY+ L L+
Sbjct: 860 GVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDF 901
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 127/260 (48%), Gaps = 7/260 (2%)
Query: 104 YAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD 163
Y D ++ +F M+ GI P +FTYP +LK C + + G Q+ V K+G +
Sbjct: 413 YGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFN 472
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
VY ++ L+ Y + A K+F + E VVSW +I ++ EA+ F +M+D
Sbjct: 473 VYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQD 532
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G + D +SAC + L G+ +H Q G + +G AL+ +YA+CG V
Sbjct: 533 QGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVRE 592
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A F ++ + +W++++ G AQ GY EEAL +F+ M + + N TF + A +
Sbjct: 593 AYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAAN 652
Query: 344 AGMVEDGYRYFHEMEHVHGI 363
V G + +HG+
Sbjct: 653 IANVRIG-------KQIHGM 665
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 154/375 (41%), Gaps = 36/375 (9%)
Query: 40 SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY-VNDSVPIPWN 98
S + + QIHA+ SG ++ I L+ + L+ A+ + N DSV W
Sbjct: 179 SFRFVEQIHAKTITSGFESSTFICNPLIDL--YFKNGFLSSAKKVFENLKARDSVS--WV 234
Query: 99 NLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
+I G + + EA+ +F + VL AC ++ G Q+ V K
Sbjct: 235 AMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFFEFGKQLHGLVLKQ 280
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
G S+ Y N LV Y A ++F M +R VS+N +I+ + ++ A+ F
Sbjct: 281 GFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALF 340
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
KM +PD T+ +LSAC +G L GK H I+ G + + +L+D+Y KC
Sbjct: 341 KKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKC 400
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
+ A F L Q ++ ++F+ M+ I PN T+ +L
Sbjct: 401 SDIKTAHEFF---------------LCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSIL 445
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
C G + G + H G + + D+ A+ G L A + + +
Sbjct: 446 KTCTTLGATDLGEQ-IHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLK-END 503
Query: 399 PIVLRALLSASSIHD 413
+ A+++ + HD
Sbjct: 504 VVSWTAMIAGYTQHD 518
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 134/317 (42%), Gaps = 55/317 (17%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M++ G++ T+ ++L+ C +G++ L+ FY +
Sbjct: 72 MEQHGVRANSQTFLWLLEGCLNSRSFYDGLK-------------------LIDFYLAFGD 112
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
A VFD+M RS+ WN I + +G G F +M E DE VVL
Sbjct: 113 LNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRG 172
Query: 240 CTELGN---LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINV 296
C+ GN + +H + I G + + LID+Y K G + A+ +F ++ +
Sbjct: 173 CS--GNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDS 230
Query: 297 WTWSAMILGLAQHGYAEEALELFSN----------------------MKNSSISPNYVTF 334
+W AMI GL+Q+GY EEA+ LF +K S YV
Sbjct: 231 VSWVAMISGLSQNGYEEEAMLLFCQIVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVC- 289
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI--MN 392
++ + +G + + FH M + R+ Y+++ LA+ G++ A MN
Sbjct: 290 NALVTLYSRSGNLSSAEQIFHCMS-----QRDRVSYNSLISGLAQQGYINRALALFKKMN 344
Query: 393 MPFQ-PNPIVLRALLSA 408
+ Q P+ + + +LLSA
Sbjct: 345 LDCQKPDCVTVASLLSA 361
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 159/431 (36%), Positives = 240/431 (55%), Gaps = 8/431 (1%)
Query: 73 SSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
S S NL A + SV + W ++I GYA +V +F +M++ GI P FT
Sbjct: 297 SKSGNLNSAIQVFETMGERSV-VSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTI 355
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
+L ACA L G V + ++ + SD++ +N L+ Y C DA VF +M
Sbjct: 356 TTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQV 415
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
+ +VSWN +I +N EA+ FV+M+ +P+ TM +L AC L L G+ +
Sbjct: 416 KDIVSWNTMIGGYSKNSLPNEALNLFVEMQ-YNSKPNSITMACILPACASLAALERGQEI 474
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H ++ G L+ + AL+DMY KCGA+G ARLLF + E ++ +W+ MI G HGY
Sbjct: 475 HGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYG 534
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
EA+ F+ M+NS I P+ V+F+ +L AC+H+G++++G+ +F+ M + I+P HY
Sbjct: 535 SEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYAC 594
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSI-HDAKYQDGVGNEVRRRLLEL 431
+ D+LARAG+L +AY FI MP +P+ + ALL I HD K + V V EL
Sbjct: 595 IVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHV----FEL 650
Query: 432 EPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDS 491
EP + V++AN YAE WE+V +R + GL+K G SW+E+ G +H F +G DS
Sbjct: 651 EPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTG-DS 709
Query: 492 QVELAGIYQIL 502
LA ++L
Sbjct: 710 SHPLANKIELL 720
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 131/278 (47%), Gaps = 8/278 (2%)
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
L + + D I WN++I GY + + + +F M GI T V+ C+
Sbjct: 207 LFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGM 266
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L G + K+ ++ NN L+ Y A +VF+ M ERSVVSW +I
Sbjct: 267 LLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAG 326
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
+V F +M+ G PD T+ +L AC G L GK VH + E +
Sbjct: 327 YAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSD 386
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+ AL+DMYAKCG++G A +FS M+ ++ +W+ MI G +++ EAL LF M+
Sbjct: 387 LFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQY 446
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
+S PN +T +L AC +E G + +HG
Sbjct: 447 NS-KPNSITMACILPACASLAALERG-------QEIHG 476
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 161/362 (44%), Gaps = 57/362 (15%)
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSC------------- 177
TY VL+ CA++ + +G ++ + + + ++ D + LV Y +C
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 178 ------------------------------------RRKRDACKVFDDMCERSVVSWNVI 201
RR A K+FD++ +R V+SWN +
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222
Query: 202 ITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGT 261
I+ V N + + F +M LG D TM+ V++ C+ G L LG+ +H I+
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASF 282
Query: 262 VLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSN 321
L L+DMY+K G + A +F M E +V +W++MI G A+ G ++ ++ LF
Sbjct: 283 GKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHE 342
Query: 322 MKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAG 381
M+ ISP+ T +L AC G++E+G + H + ++ + + D+ A+ G
Sbjct: 343 MEKEGISPDIFTITTILHACACTGLLENG-KDVHNYIKENKMQSDLFVSNALMDMYAKCG 401
Query: 382 HLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVI 441
+ +A++ M ++ ++S +++ ++ + NE +E++ N +
Sbjct: 402 SMGDAHSVFSEMQ-------VKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSKPNSIT 454
Query: 442 VA 443
+A
Sbjct: 455 MA 456
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 178/513 (34%), Positives = 267/513 (52%), Gaps = 24/513 (4%)
Query: 1 MVRFPVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDA 60
M R V + H FPP L KA KL + +Q HA I G +D
Sbjct: 95 MRRNGVVPSRHTFPP---------LLKA-----VFKL--RDANPFQFHAHILKFGFDSDL 138
Query: 61 QILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDM 120
+ L+ + S+ L S + + D + W +I G+ +D EA+ F++M
Sbjct: 139 FVRNSLI---SGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEM 195
Query: 121 KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG-LDSDVYTNNNLVRFYGSCRR 179
KR G+ E T VLKA + + G + ++G + DV+ ++LV YG C
Sbjct: 196 KRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGC 255
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
DA KVFD+M R+VV+W +I V+ + + F +M P+E T+ VLSA
Sbjct: 256 YDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSA 315
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C +G L G+ VH +I+ +N +GT LID YAKCG + A L+F R+ E NV+TW
Sbjct: 316 CAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREKNVYTW 375
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+AMI G A HGYA A++LF M +S +SPN VTF+ VL AC H G+VE+G R F M+
Sbjct: 376 TAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRLFLSMKE 435
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
++P HY M D+ R G L+EA I MP +P V AL + IH Y+
Sbjct: 436 RFNLEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNAVWGALFGSCLIH-KDYE-- 492
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
+G R+++L+P S ++AN Y+E W+ V+ VR+ MK+ + K G SW+E+
Sbjct: 493 LGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDDVARVRKQMKDQQVVKSPGCSWIEVK 552
Query: 480 GSIHRFYSGYDSQ-VELAGIYQILETLNLHMKV 511
G +H F + D + +E +Y+ L+ + + M++
Sbjct: 553 GKLHEFIAFDDKKPLESDDLYKTLDNVGVQMRL 585
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 172/332 (51%), Gaps = 16/332 (4%)
Query: 62 ILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW--SDRPREAVWVFID 119
L L+R CT ++ YAR +LC S+ + W++L+ ++ + R + +
Sbjct: 38 FLSRLLRRCT--AATQFRYARRLLCQIQTPSIQL-WDSLVGHFSGRVTLNRRLSFLSYRQ 94
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M+R G+ P+ T+P +LKA ++ N Q A++ K G DSD++ N+L+ Y +C
Sbjct: 95 MRRNGVVPSRHTFPPLLKAVFKLRDANP-FQFHAHILKFGFDSDLFVRNSLISGYSNCGL 153
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
+VFD ++ VVSW +I V N EA+ YFV+MK G +E T++ VL A
Sbjct: 154 FEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTVVSVLKA 213
Query: 240 CTELGNLSLGKWVHLQLIERGTV-LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
+ ++ G+ +H +E G V + +G++L+DMY KCG A+ +F M NV T
Sbjct: 214 TRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEMPSRNVVT 273
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
W+A+I G Q E+ + +F M S ++PN T VL AC H G + G R
Sbjct: 274 WTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRV----- 328
Query: 359 HVHGIK-PMRIHY---HTMADILARAGHLKEA 386
H + IK + I+ T+ D A+ G L+EA
Sbjct: 329 HCYVIKNSIEINTTVGTTLIDFYAKCGCLEEA 360
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 174/500 (34%), Positives = 258/500 (51%), Gaps = 26/500 (5%)
Query: 13 FPPKPSNCNSDLLSKARQCLSFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRF 69
FPP+P+ S L+ C K L Q+HAQ G+ + + +LV
Sbjct: 40 FPPQPTT--------HYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHL 91
Query: 70 CTLSSSKNLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGI 125
+S+S L AR++ D +P WN LIRGYAW+ A+ ++ M G+
Sbjct: 92 YAVSNS--LLNARNLF-----DKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGL 144
Query: 126 KPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACK 185
+P FT PFVLKAC+ +S + EG + V KSG + D++ L+ Y C DA +
Sbjct: 145 RPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGR 204
Query: 186 VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGN 245
VFD + R V WN ++ +N E++ +M G P E T++ V+S+ ++
Sbjct: 205 VFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVAC 264
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
L G+ +H G N ++ TALIDMYAKCG+V A LF R+ E V +W+A+I G
Sbjct: 265 LPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITG 324
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKP 365
A HG A AL+LF M+ P+++TF+GVL AC+ ++++G ++ M +GI P
Sbjct: 325 YAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITP 383
Query: 366 MRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVR 425
HY M D+L G L EAY I NM +P+ V ALL++ IH +
Sbjct: 384 TVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHG---NVELAELAL 440
Query: 426 RRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRF 485
+L+ELEP S N VI+AN YA+ G WE V +R+ M + +KK SW+E+ ++ F
Sbjct: 441 EKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAF 500
Query: 486 YSGYDSQVELAGIYQILETL 505
+G S IY L+ L
Sbjct: 501 LAGDVSHSNSDAIYAELKRL 520
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 154/413 (37%), Positives = 240/413 (58%), Gaps = 3/413 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
IPW+ +I YA S++ REAV +F M+R + P +FT+ VL++CA I L G QV +
Sbjct: 209 IPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCH 268
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V K GLD +V+ +N L+ Y C R ++ K+F ++ R+ V+WN +I V++ +A
Sbjct: 269 VLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKA 328
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ + M + + E T VL AC L + LG +H ++ + +G ALIDM
Sbjct: 329 LSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDM 388
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG++ ARL+F + E + +W+AMI G + HG EAL+ F M+ + PN +TF
Sbjct: 389 YAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTF 448
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ +L AC++AG+++ G YF M +GI+P HY M +L R+GHL +A I +P
Sbjct: 449 VSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIP 508
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
+PN V RALL A IH+ +G +++L+++P+ V+++N YA W
Sbjct: 509 LEPNVKVWRALLGACVIHN---DVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNS 565
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNL 507
V++VR+FMKN G+KK G+SW+E G +H F G S ++ I +LE LN+
Sbjct: 566 VASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDMKMISGMLEWLNM 618
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 180/370 (48%), Gaps = 9/370 (2%)
Query: 45 YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYA--RSILCNYVNDSVPIPWNNLIR 102
Y +HA I G +++A + L+ + S N +I C + + W ++
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDM-----VSWTGMVA 115
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
YA +DR ++++ +F +M+ G P FT+ VLKAC + + G V V K+ +
Sbjct: 116 CYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEM 175
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
D+Y L+ Y D +VF++M + V+ W+ +I+ ++ EAV F +M+
Sbjct: 176 DLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMR 235
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
P++ T VL +C + NL LGK VH +++ G N + AL+D+YAKCG +
Sbjct: 236 RAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLD 295
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
+ LF + N TW+ MI+G Q G ++AL L+ NM + + VT+ VL AC
Sbjct: 296 NSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACA 355
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVL 402
+E G + H + + + + D+ A+ G +K A + +M + + I
Sbjct: 356 SLAAMELGTQ-IHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNA-RLVFDMLSERDEISW 413
Query: 403 RALLSASSIH 412
A++S S+H
Sbjct: 414 NAMISGYSMH 423
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 140/304 (46%), Gaps = 1/304 (0%)
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
D + + LI+GY S + E V +F + R G + F + +LK +
Sbjct: 3 DRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYS 62
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+ A + K G +S+ + L+ Y C A + FD + + +VSW ++ EN
Sbjct: 63 LHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDR 122
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
+++ F +M+ +GF P+ T VL AC L S+GK VH +++ ++ +G
Sbjct: 123 FQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVG 182
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
L+D+Y K G +F M + +V WS MI AQ + EA+ELF M+ + + PN
Sbjct: 183 LLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPN 242
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
TF VL +C ++ G + + V G+ + + D+ A+ G L +
Sbjct: 243 QFTFASVLQSCASIENLQLGKQVHCHVLKV-GLDGNVFVSNALMDVYAKCGRLDNSMKLF 301
Query: 391 MNMP 394
M +P
Sbjct: 302 MELP 305
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%)
Query: 190 MCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
M +R+ VS+ +I V++ L E V F ++ G E + +L + L
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
+H + + G N +GTALID YA CG+V AR F + ++ +W+ M+ A++
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
+++L+LF+ M+ +PN+ TF GVL AC
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKAC 152
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/469 (36%), Positives = 256/469 (54%), Gaps = 14/469 (2%)
Query: 42 KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP----W 97
K L QIHA+I ++GL ++ +L+ F ++S ++Y R + S+P P +
Sbjct: 33 KPLQQIHARIIITGLGRTRSLITKLLSFAYAAASP-ISYTRRLFF-----SIPKPDTFLF 86
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
++LI + P+E++ + M I + +T+ V+K+ A+++ + G + +V
Sbjct: 87 HSLITLTSKFSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYI 146
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
G D Y LV FY A KVFD M E++VV+WN +I+ +N + EAV
Sbjct: 147 CGYGLDAYVQAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVEL 206
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
F M+DLG +PD +T + +LSAC ++G + LG WVH + LN LGTAL++MY++
Sbjct: 207 FFLMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSR 266
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CG V AR +F MEE N+ W+AMI G HG+ +A+ELF+ M PN VTF+ V
Sbjct: 267 CGNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAV 326
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM-PFQ 396
L AC HAG+V++G + F M+ +G+ P H M D+L RAGHL EAY FI N P +
Sbjct: 327 LSACAHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKE 386
Query: 397 PNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVS 456
P P V A+L A +H +G EV LL +EP + V+++N YA G ++V
Sbjct: 387 PAPAVWTAMLGACKMHK---NFDLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMDRVE 443
Query: 457 NVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+R M LKK G S +++ ++ F G S + IY L+ L
Sbjct: 444 KIRNIMIRNRLKKEVGYSTIDVDHKVYLFSMGDKSHPKTNQIYLYLDEL 492
>gi|449477579|ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 156/486 (32%), Positives = 266/486 (54%), Gaps = 8/486 (1%)
Query: 32 LSFLKLCCSKKHLYQIHAQI-QVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
+S +K C K L QIHA I S +Q+ L+ L R + + ++L Y+R + N
Sbjct: 31 ISLIKSCTHKSQLLQIHAHIITTSSIQDPIVSLRFLTRTAS-APFRDLGYSRRLFDLLTN 89
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
V +N ++R Y+ S P E ++++ DM+R+G++ + F +K+C ++ L G+Q
Sbjct: 90 PFVS-HYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQ 148
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+ A + +G +D +++ Y C + +ACK+FD++ ++ VV+WNV+I+ N
Sbjct: 149 IHARIFINGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKR 208
Query: 211 LGEAVGYFVKMKDLGF--EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+A+G F M+ + +PD+ T L++L AC +L L G+ +H + + G L
Sbjct: 209 TRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLC 268
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
+LI MY++CG + A +F +M E NV +WSAMI GL+ +G+ EA+E F M+ + +
Sbjct: 269 NSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVE 328
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
P TF VL AC+H G+V++G +F M I P HY + D+L RAG L +AY
Sbjct: 329 PGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYE 388
Query: 389 FIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAE 448
IM+M +P+ + R LL A IH +G + L+EL+ + + + V++ N Y+
Sbjct: 389 LIMSMEVRPDATMWRTLLGACRIHG---HGNLGERIVEHLIELKSQEAGDYVLLLNIYSS 445
Query: 449 VGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLH 508
G W+KV+ +R+ MK G+ + +EL G +H+F S IY+ L+ +N
Sbjct: 446 AGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQ 505
Query: 509 MKVLNF 514
+K+ +
Sbjct: 506 LKIAGY 511
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 165/480 (34%), Positives = 266/480 (55%), Gaps = 11/480 (2%)
Query: 28 ARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
A C+ L C + H+ Q+HA + +G D I +L+ T + K + A S+
Sbjct: 3 AESCIDLLLRCRNVFHIRQVHAHVVANGTLQDLVIANKLLY--TYAQHKAIDDAYSLFDG 60
Query: 88 Y-VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
+ DS W+ ++ G+A + F ++ R G+ P +T PFV++ C + + L
Sbjct: 61 LTMRDSKT--WSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQ 118
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G + V K GL SD + +LV Y C DA ++F+ M + +V+W V+I
Sbjct: 119 IGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYA 178
Query: 207 E-NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
+ N + E++ F +M++ G PD+ M+ V++AC +LG + ++ + ++ G L+
Sbjct: 179 DCNAY--ESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDV 236
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
LGTA+IDMYAKCG+V AR +F RM+E NV +WSAMI HG ++A++LF M +
Sbjct: 237 ILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSC 296
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
+I PN VTF+ +L AC+HAG++E+G R+F+ M H ++P HY M D+L RAG L E
Sbjct: 297 AILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDE 356
Query: 386 AYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANK 445
A I M + + + ALL A IH +K + + + LLEL+P+ + V+++N
Sbjct: 357 ALRLIEAMTVEKDERLWSALLGACRIH-SKME--LAEKAANSLLELQPQNPGHYVLLSNI 413
Query: 446 YAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
YA+ G WEKV+ R M LKK+ G +W+E+ ++F G S + IY++L +L
Sbjct: 414 YAKAGKWEKVAKFRDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSL 473
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 148/414 (35%), Positives = 225/414 (54%), Gaps = 4/414 (0%)
Query: 74 SSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYP 133
SS R + + V + WN L+ G A R EA+ M R G +P FT
Sbjct: 116 SSTAFESVRKVFDEMIERDV-VSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLS 174
Query: 134 FVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER 193
VL AE + + G++V ++G DSDV+ ++L+ Y +C R + KVFD++ R
Sbjct: 175 TVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR 234
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
+ WN ++ C +N + EA+G F +M G P T ++ C L +L GK +H
Sbjct: 235 DHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLH 294
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
+I G N + ++LIDMY KCG + A +F +M +V +W+AMI+G A HG A
Sbjct: 295 AYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAR 354
Query: 314 EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
EAL LF M+ + PN++TFL VL AC+HAG+V+ G++YF M + +GI P H+ +
Sbjct: 355 EALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAAL 414
Query: 374 ADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP 433
AD L RAG L EAY FI M +P V LL A +H + EV ++++ELEP
Sbjct: 415 ADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTM---LAEEVAKKIMELEP 471
Query: 434 RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYS 487
R + V+++N Y+ G W + +++R M+ G+KK SW+E+ +H F +
Sbjct: 472 RSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVA 525
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 145/337 (43%), Gaps = 23/337 (6%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEF--TYPFVLKACAEISGLNEGMQVQAN 154
W IR A +AV +F+ M+ + + P LK+CA + G + A
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75
Query: 155 VTKSGLDSDVYTNNNLVRFY-------------------GSCRRKRDACKVFDDMCERSV 195
+SG +D +T N L+ Y GS KVFD+M ER V
Sbjct: 76 AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135
Query: 196 VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQ 255
VSWN ++ C E EA+G+ KM GF PD T+ VL E ++ G VH
Sbjct: 136 VSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGF 195
Query: 256 LIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEA 315
G + +G++LIDMYA C + +F + + W++++ G AQ+G EEA
Sbjct: 196 AFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEA 255
Query: 316 LELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMAD 375
L +F M + + P VTF ++ C + + G + H G + ++ D
Sbjct: 256 LGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFG-KQLHAYVICGGFEDNVFISSSLID 314
Query: 376 ILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
+ + G + A+ M P+ + A++ ++H
Sbjct: 315 MYCKCGEISIAHCIFDKMS-SPDVVSWTAMIMGYALH 350
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 161/471 (34%), Positives = 252/471 (53%), Gaps = 6/471 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGY 104
Q+H+Q GL D + L+ + S ++ AR I ++ +V W +I GY
Sbjct: 292 QLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNV-FSWTAMITGY 350
Query: 105 AW-SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD 163
EA+ +F M + P FT+ LKACA ++ L G QV + K G S
Sbjct: 351 VQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSV 410
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
N+L+ Y R DA K FD + E++++S+N +I +NL EA+ F +++D
Sbjct: 411 NCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIED 470
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G T +LS +G + G+ +H ++I+ G LN + ALI MY++CG +
Sbjct: 471 QGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIES 530
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A +F ME+ NV +W+++I G A+HG+A +ALELF M + PN VT++ VL AC+H
Sbjct: 531 AFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSH 590
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
G+V +G+++F M HG+ P HY M DIL R+G L EA FI +MP++ + +V R
Sbjct: 591 VGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWR 650
Query: 404 ALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMK 463
L A +H +G + ++E EP ++++N YA W++VSN+R+ MK
Sbjct: 651 TFLGACRVHG---NLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMK 707
Query: 464 NVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
L K G SWVE+ +H+FY G S + A IY L+ L++ +K L +
Sbjct: 708 EKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGY 758
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 204/411 (49%), Gaps = 19/411 (4%)
Query: 34 FLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
FLK C + +H ++ S LQ D+ L L+ S A SI +
Sbjct: 72 FLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISL--YSKCGQWEKATSIFQLMGS 129
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
I W+ ++ +A ++ A+ F+DM G P E+ + +AC+ ++ G
Sbjct: 130 SRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDS 189
Query: 151 VQANVTKSG-LDSDVYTNNNLVRFYGSCRRKR-DACKVFDDMCERSVVSWNVIITVCVEN 208
+ V K+G L SDV L+ + R A KVF+ M ER+ V+W ++IT ++
Sbjct: 190 IFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQF 249
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+ GEA+ F++M G+EPD T+ V+SAC + L LG+ +H Q I G L+ +G
Sbjct: 250 GYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVG 309
Query: 269 TALIDMYAKC---GAVGCARLLFSRMEEINVWTWSAMILGLAQH-GYAEEALELFSNMKN 324
LI+MYAKC G++ AR +F ++ + NV++W+AMI G Q GY EEAL+LF M
Sbjct: 310 CCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMIL 369
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ + PN+ TF L AC + + G + F + G + +++ + AR+G +
Sbjct: 370 THVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKL-GFSSVNCVANSLISMYARSGRID 428
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
+A ++ F+ N L+S +++ DA ++ E E+E +G
Sbjct: 429 DARK-AFDILFEKN------LISYNTVIDAYAKNLNSEEALELFNEIEDQG 472
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 122/262 (46%), Gaps = 4/262 (1%)
Query: 109 RPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNN 168
R +A+ M +G P TY LK C + G V +T+S L D T N
Sbjct: 46 RLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLN 105
Query: 169 NLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
+L+ Y C + A +F M R ++SW+ +++ N A+ FV M + G+
Sbjct: 106 SLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYY 165
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQLGTALIDMYAKC-GAVGCAR 285
P+E AC+ +S+G + +++ G + + +G LIDM+ K G + A
Sbjct: 166 PNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAF 225
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F +M E N TW+ MI L Q GYA EA++LF M S P+ T GV+ AC +
Sbjct: 226 KVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANME 285
Query: 346 MVEDGYRYFHEMEHVHGIKPMR 367
++ G + H HG+ R
Sbjct: 286 LLLLG-QQLHSQAIRHGLTLDR 306
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 63/150 (42%), Gaps = 1/150 (0%)
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
+ N L +A+ M G PD T + L C + +G VH +L + L+
Sbjct: 42 INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRM-EEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+LI +Y+KCG A +F M ++ +WSAM+ A + AL F +M
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYF 354
+ PN F AC+ A V G F
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIF 191
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 175/513 (34%), Positives = 262/513 (51%), Gaps = 44/513 (8%)
Query: 34 FLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSV 93
L+ C + L IHA + L + ++ ++V C +++L YA S+L V +
Sbjct: 20 ILQNCKNIVELKSIHAHVIKYSLSQSSFLVTKMVDVC--DKTEDLGYA-SLLFKQVKEPN 76
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKR-------RGIKPTEFTYPFVLKACAEISGLN 146
+N +IR + + A+ + +M R I P FT+PFV+K+C+ + N
Sbjct: 77 GYLYNAMIRAHTHNKVYALAILFYKEMLRLKDPESENPIFPDRFTFPFVIKSCSGLVCYN 136
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT--V 204
G QV A++ K G S++ N L+ Y C DA KVFD M ER +SWN II+ V
Sbjct: 137 LGKQVHAHLCKFGPKSNITMENALIDMYTKCASLLDAHKVFDGMVERDAISWNSIISGHV 196
Query: 205 CVENL-----------------WLGEAVGY------------FVKMKDLGFEPDETTMLV 235
V + W GY F +M+ +G EPDE +++
Sbjct: 197 GVGQMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEPDEISIIS 256
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
VL AC +LG L +GKW+H+ G + + AL++MY+KCG +G A LF +M + +
Sbjct: 257 VLPACAQLGALEVGKWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQAYQLFDQMSKGD 316
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
V +WS MI GLA HG A EA+ELF MK + I PN +TFLG+L AC HAG +G YF
Sbjct: 317 VISWSTMIGGLANHGKAREAIELFKRMKKAKIEPNGITFLGLLSACAHAGFWNEGLAYFD 376
Query: 356 EMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAK 415
M + I+P HY + DIL RAG L +A I MP +P+ + +LLS+ H
Sbjct: 377 SMSKDYHIEPEVEHYGCLVDILGRAGRLSQALDVIEKMPMKPDSKIWGSLLSSCRTHS-- 434
Query: 416 YQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSW 475
+ L ELEP + N V+++N YA++ W+ VS +R+ +K+ +KK G S
Sbjct: 435 -NLDIAIIAMEHLEELEPDDTGNYVLLSNIYADLAKWDGVSRMRKLIKSKSMKKTPGSSL 493
Query: 476 VELGGSIHRFYSGYDSQVELAGIYQILETLNLH 508
+++ + F S DS+ I+ +LE L H
Sbjct: 494 IDINNVVQEFVSWDDSKPFSRDIFWLLELLTSH 526
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 162/484 (33%), Positives = 253/484 (52%), Gaps = 6/484 (1%)
Query: 22 SDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSS-SKNLTY 80
S LL S L+ C S + Y + Q+ L+ +L V + SK
Sbjct: 392 SGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKA-GIVLDSFVSTALIDVYSKGGKM 450
Query: 81 ARSILCNYVNDSVPIP-WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKAC 139
+ L + D + WN ++ G+ SD REA+ +F M RG K + T+ KA
Sbjct: 451 EEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAA 510
Query: 140 AEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWN 199
+ L +G Q+ A V K D++ + ++ Y C + A KVF+ + V+W
Sbjct: 511 GCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWT 570
Query: 200 VIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER 259
+I+ CVEN +A+ + +M+ G +PDE T ++ AC+ L L GK +H +++
Sbjct: 571 TVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKL 630
Query: 260 GTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELF 319
+ + T+L+DMYAKCG + A LF RM +V W+AMI+GLAQHG AEEAL F
Sbjct: 631 NCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFF 690
Query: 320 SNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILAR 379
+ MK+ ++P+ VTF+GVL AC+H+G+ D Y+ F M+ +G++P HY + D L+R
Sbjct: 691 NEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSR 750
Query: 380 AGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNL 439
AGH++EA + +MPF+ + + R LL+A + K G V +L ++P S
Sbjct: 751 AGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDK---ETGERVAEKLFTMDPSDSAAY 807
Query: 440 VIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIY 499
V+++N YA WE + R MK V +KK G SW+++ +H F +G S E IY
Sbjct: 808 VLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIY 867
Query: 500 QILE 503
+E
Sbjct: 868 NKVE 871
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 160/366 (43%), Gaps = 31/366 (8%)
Query: 45 YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRG- 103
+ I ++ S + L L + C L S + + A L Y + + W+ + G
Sbjct: 107 FHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEA---LQGYAV-KIGLQWDVFVAGA 162
Query: 104 ----YAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
YA R REA +F M R + + ++KA E+ +E + + + +SG
Sbjct: 163 LVNIYAKFQRIREARVLFDRMPVRDV----VLWNVMMKAYVEMGAGDEVLGLFSAFHRSG 218
Query: 160 LDSDVYTNNNLVRFYGSC--------RRKRDACKVF--DDMCERSVVSWNVIITVCVENL 209
L D + ++ G + + A K+F DD + V WN ++ ++
Sbjct: 219 LRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDD--DSDVTVWNKTLSSYLQAG 276
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
EAV F M D T +V+LS L +L LGK +H ++ G +
Sbjct: 277 EGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVAN 336
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
+ I+MY K G+V AR +F +M+E+++ +W+ +I G A+ G E +L LF ++ S + P
Sbjct: 337 SAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLP 396
Query: 330 NYVTFLGVLCACNHAGMVEDGY---RYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+ T VL AC+ +E+ Y R H GI + D+ ++ G ++EA
Sbjct: 397 DQFTITSVLRACSS---LEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEA 453
Query: 387 YTFIMN 392
N
Sbjct: 454 ELLFHN 459
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 8/212 (3%)
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD--DMCE 192
+L+ S L G + A + SGL+ D Y NNL+ Y C A K+FD +
Sbjct: 19 ILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSD 78
Query: 193 RSVVSWNVIITVCVENLWL------GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNL 246
R +V++N I+ L EA F ++ T+ + C G+
Sbjct: 79 RDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSP 138
Query: 247 SLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGL 306
S + + ++ G + + AL+++YAK + AR+LF RM +V W+ M+
Sbjct: 139 SASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAY 198
Query: 307 AQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
+ G +E L LFS S + P+ V+ +L
Sbjct: 199 VEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL 230
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 123/308 (39%), Gaps = 39/308 (12%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL-CNYVNDSVPIPWNNLIRGY 104
+ HA I SGL D + L+ + +L AR + +D + +N ++ Y
Sbjct: 34 RTHAVIVTSGLNPDRYVTNNLITM--YAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY 91
Query: 105 AWS------DRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
A + ++ EA +F +++ + T T + K C + +Q K
Sbjct: 92 AHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKI 151
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
GL DV+ LV Y +R R+A +FD M R VV WNV++ VE E +G F
Sbjct: 152 GLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLF 211
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
G PD C + + +G + + TV +L + YA
Sbjct: 212 SAFHRSGLRPD----------CVSVRTILMG-------VGKKTVFERELEQ--VRAYAT- 251
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI---SPNYVTFL 335
LF ++ +V W+ + Q G EA++ F +M S + S Y+ L
Sbjct: 252 -------KLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVIL 304
Query: 336 GVLCACNH 343
V+ + NH
Sbjct: 305 SVVASLNH 312
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 170/470 (36%), Positives = 244/470 (51%), Gaps = 8/470 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGY 104
QIHAQI S +D ++ L + + + K+ AR + N V I WN +I G
Sbjct: 267 QIHAQIVESEHHSDVRVSTALTKMYIKCGAVKD---AREVFECLPNRDV-IAWNTMIGGL 322
Query: 105 AWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDV 164
S + EA +F M + + P TY +L ACA GL G ++ A K GL SDV
Sbjct: 323 VDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDV 382
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL 224
N L+ Y +DA +VFD M +R VVSW ++ + + E+ F KM
Sbjct: 383 RFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQ 442
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCA 284
G E ++ T + VL AC+ L GK +H ++++ G + + AL+ MY KCG+V A
Sbjct: 443 GVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDA 502
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA 344
+ M +V TW+ +I GLAQ+G EAL+ F MK+ + PN TF+ V+ AC
Sbjct: 503 IRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVR 562
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRA 404
+VE+G R F M +GI P HY M DILARAGHL EA I+ MPF+P+ + A
Sbjct: 563 NLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGA 622
Query: 405 LLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKN 464
LL+A H +G + + L+LEP+ + V ++ YA GMW V+ +R+ MK
Sbjct: 623 LLAACRAHG---NVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKE 679
Query: 465 VGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
G+KK G SW+E+ G +H F +G S IY LE L +K L +
Sbjct: 680 RGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGY 729
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 181/366 (49%), Gaps = 7/366 (1%)
Query: 32 LSFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
+ L+ C K L Q+H I G++ + I+ L++ S N AR + +
Sbjct: 48 VKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVN--EARRLFDKF 105
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
N SV + WN +I GYA +EA +F M++ G++P +FT+ +L AC+ + LN G
Sbjct: 106 SNKSV-VSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWG 164
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
+V V ++GL ++ N L+ Y C RDA +VFD M R VSW + E+
Sbjct: 165 REVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAES 224
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+ E++ + M G P T + VLSAC L L GK +H Q++E + ++
Sbjct: 225 GYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVS 284
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
TAL MY KCGAV AR +F + +V W+ MI GL G EEA +F M ++
Sbjct: 285 TALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVA 344
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
P+ VT+L +L AC G + G + H G+ + + ++ ++AG +K+A
Sbjct: 345 PDRVTYLAILSACARPGGLACG-KEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQ 403
Query: 389 FIMNMP 394
MP
Sbjct: 404 VFDRMP 409
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 166/315 (52%), Gaps = 6/315 (1%)
Query: 32 LSFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
+S L C S L ++H ++ +GL N+A + L+ + ++ AR + +
Sbjct: 149 VSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISM--YAKCGSVRDARRVF-DA 205
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
+ + W L YA S +E++ + M + G++P+ TY VL AC ++ L +G
Sbjct: 206 MASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKG 265
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
Q+ A + +S SDV + L + Y C +DA +VF+ + R V++WN +I V++
Sbjct: 266 KQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDS 325
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
L EA G F +M PD T L +LSAC G L+ GK +H + ++ G V + + G
Sbjct: 326 GQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFG 385
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
ALI+MY+K G++ AR +F RM + +V +W+A++ G A G E+ F M +
Sbjct: 386 NALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVE 445
Query: 329 PNYVTFLGVLCACNH 343
N +T++ VL AC++
Sbjct: 446 ANKITYMCVLKACSN 460
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 171/350 (48%), Gaps = 45/350 (12%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
+ ++G + + Y +L++C + L G QV ++ + G+ +VY N L++ Y C
Sbjct: 35 LHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGS 94
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
+A ++FD +SVVSWNV+I+ EA F M+ G EPD+ T + +LSA
Sbjct: 95 VNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSA 154
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C+ L+ G+ VH++++E G N +G ALI MYAKCG+V AR +F M + +W
Sbjct: 155 CSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSW 214
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH---- 355
+ + A+ GYA+E+L+ + M + P+ +T++ VL AC +E G + H
Sbjct: 215 TTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKG-KQIHAQIV 273
Query: 356 EMEHVHGIK-------------------------PMR--IHYHTMADILARAGHLKEAYT 388
E EH ++ P R I ++TM L +G L+EA+
Sbjct: 274 ESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHG 333
Query: 389 FIMNMPFQ---PNPIVLRALLSASS----------IHDAKYQDGVGNEVR 425
M + P+ + A+LSA + IH +DG+ ++VR
Sbjct: 334 MFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVR 383
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/469 (33%), Positives = 246/469 (52%), Gaps = 6/469 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIH+ +G ++D + L+ S + L AR IL + + W ++I GY
Sbjct: 367 QIHSLSIKNGFESDMYVSGVLIDM--YSKYRCLDKARKIL-EMLEKRDVVSWTSMIAGYV 423
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
D EA+ F +M+ G+ P ACA I + +G+Q+ A V SG +D+
Sbjct: 424 QHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADIS 483
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N LV Y C R +A +F ++ + ++WN +I+ ++ +A+ F+KM G
Sbjct: 484 IWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAG 543
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+ + T + +SA L ++ GK VH + ++ G ++ ALI +Y KCG++ A+
Sbjct: 544 AKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAK 603
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
++FS M N +W+ +I +QHG EAL+LF MK + PN VTF+GVL AC+H G
Sbjct: 604 MIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVG 663
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+VE+G YF M +V+G+ P+ HY + DIL RAG L A F+ MP N ++ R L
Sbjct: 664 LVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTL 723
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
LSA +H +G + LLELEP S + V+++N YA G W VR+ MK+
Sbjct: 724 LSACKVHK---NIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDR 780
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
G++K G SW+E+ ++H F+ G IY+ L LN + + +
Sbjct: 781 GIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGY 829
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 178/381 (46%), Gaps = 9/381 (2%)
Query: 32 LSFLKLCCSKKHLYQ----IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
LS + C+K L+ IHAQ+ ++ + L+ S L A + C+
Sbjct: 147 LSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKL--AERVFCD 204
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+ + +N LI G+A A+ +F +M+ G++P T +L ACA + L +
Sbjct: 205 MLFCD-RVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQK 263
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G Q+ + + K+G+ D T +L+ Y C A +F+ +VV WN+++ +
Sbjct: 264 GKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQ 323
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
L ++ F +M+ G P++ T +L CT G + LG+ +H I+ G + +
Sbjct: 324 ISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYV 383
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
LIDMY+K + AR + +E+ +V +W++MI G QH + EEAL F M++ +
Sbjct: 384 SGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGV 443
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
P+ + AC + G + H +V G ++T+ ++ AR G +EA+
Sbjct: 444 WPDNIGLASAASACAGIKAMRQGLQ-IHARVYVSGYAADISIWNTLVNLYARCGRSEEAF 502
Query: 388 TFIMNMPFQPNPIVLRALLSA 408
+ + + + I L+S
Sbjct: 503 SLFREIDHK-DEITWNGLISG 522
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 150/324 (46%), Gaps = 14/324 (4%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN ++ Y ++ +F M+ GI P +FTYP +L+ C + G Q+ +
Sbjct: 312 VLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSL 371
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K+G +SD+Y + L+ Y R A K+ + + +R VVSW +I V++ + EA
Sbjct: 372 SIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEA 431
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M+D G PD + SAC + + G +H ++ G + + L+++
Sbjct: 432 LATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNL 491
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YA+CG A LF ++ + TW+ +I G Q E+AL +F M + N TF
Sbjct: 492 YARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTF 551
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHG--IKPMRIHYHTMADIL----ARAGHLKEAYT 388
+ + A + ++ G + VHG +K +A+ L + G +++A
Sbjct: 552 ISAISALANLADIKQG-------KQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKM 604
Query: 389 FIMNMPFQPNPIVLRALLSASSIH 412
M + N + ++++ S H
Sbjct: 605 IFSEMSLR-NEVSWNTIITSCSQH 627
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 143/307 (46%), Gaps = 7/307 (2%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+IHA V GL D I L+ L + L + + ++ + W ++ GYA
Sbjct: 64 EIHATSVVRGLGADRLIGNLLI---DLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYA 120
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+EA ++ M + PT + VL AC + +G + A V K S+ +
Sbjct: 121 QRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETF 180
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDM--CERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
N L+ Y + A +VF DM C+R V++N +I+ + A+ F +M+
Sbjct: 181 VGNALIALYLGFGSFKLAERVFCDMLFCDR--VTFNTLISGHAQCGHGECALQIFDEMQL 238
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G PD T+ +L+AC +G+L GK +H L++ G + +L+D+Y KCG +
Sbjct: 239 SGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIET 298
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A +F+ + NV W+ M++ Q ++ E+F M+ + I PN T+ +L C
Sbjct: 299 AHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTC 358
Query: 344 AGMVEDG 350
G +E G
Sbjct: 359 TGQIELG 365
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 120/260 (46%), Gaps = 2/260 (0%)
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
+++ A GL +D N L+ Y A +VF ++ R VSW +++ +
Sbjct: 63 LEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQR 122
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
EA + +M P + VLSACT+ + G+ +H Q+ ++ +G
Sbjct: 123 GLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVG 182
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
ALI +Y G+ A +F M + T++ +I G AQ G+ E AL++F M+ S +
Sbjct: 183 NALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLR 242
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
P+ VT +L AC G ++ G + H G+ I ++ D+ + G ++ A+
Sbjct: 243 PDCVTVASLLAACASVGDLQKG-KQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHD 301
Query: 389 FIMNMPFQPNPIVLRALLSA 408
I N+ + N ++ +L A
Sbjct: 302 -IFNLGDRTNVVLWNLMLVA 320
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 174/456 (38%), Positives = 246/456 (53%), Gaps = 45/456 (9%)
Query: 97 WNNLIRGY----AWSDRPREA-VWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
WN LIR + A P + + +F+ M+ G++P T+PF+L++ A S L+ G V
Sbjct: 27 WNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSV 86
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD---------------------- 189
A + + GL D + +L+ Y SC A +VFD+
Sbjct: 87 HAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAGLV 146
Query: 190 ---------MCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF---EPDETTMLVVL 237
M ER+V+SW+ +I V EA+ F +M+ LG P+E TM VL
Sbjct: 147 DMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVL 206
Query: 238 SACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM-EEINV 296
+AC LG L GKW H + + G ++ LGTALIDMYAKCG+V A +FS + +V
Sbjct: 207 AACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDV 266
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
WSAMI GLA HG AEE + LFS M N + PN VTFL V CAC H G+V +G Y
Sbjct: 267 MAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRR 326
Query: 357 MEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKY 416
M + I P HY M D+ RAG +KEA+ + +MP +P+ +V ALLS S +H
Sbjct: 327 MTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHG--- 383
Query: 417 QDGVGNEVR-RRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSW 475
D E+ ++L+ELEP S V+++N YA+ G WE V +VR M+ +G+KK+ G S
Sbjct: 384 -DIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSL 442
Query: 476 VELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
+E+GG +H F+ G DS E I+ +LE + +KV
Sbjct: 443 IEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKV 478
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 127/304 (41%), Gaps = 38/304 (12%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----------- 94
+HAQI GL D + L+ SS NL +AR + +P
Sbjct: 85 SVHAQILRFGLAIDPFVQTSLISM--YSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQ 142
Query: 95 -------------------IPWNNLIRGYAWSDRPREAVWVFIDMKRRGI---KPTEFTY 132
I W+ +I GY + +EA+ +F +M+ G+ +P EFT
Sbjct: 143 AGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTM 202
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC- 191
VL AC + L G A + K G+ DV L+ Y C A VF ++
Sbjct: 203 SGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGP 262
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
+ V++W+ +I+ + E VG F KM + G P+ T L V AC G +S GK
Sbjct: 263 NKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKD 322
Query: 252 VHLQLIERGTVL-NCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQH 309
++ E +++ Q ++D+Y + G + A + M E +V W A++ G H
Sbjct: 323 YLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMH 382
Query: 310 GYAE 313
G E
Sbjct: 383 GDIE 386
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/475 (33%), Positives = 257/475 (54%), Gaps = 14/475 (2%)
Query: 46 QIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILCNYVNDSVPI----PWNNL 100
Q H + SGL D + LV + + ++ AR + D +P+ W +
Sbjct: 166 QFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVF-----DRMPVHNVMSWTAI 220
Query: 101 IRGYAWSDR-PREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
I GY S REA+ +F++M + +KP FT+ VLKACA +S + G QV A V K
Sbjct: 221 ITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMR 280
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
L S N+L+ Y C +A K FD + E+++VS+N I+ ++L EA F
Sbjct: 281 LASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFN 340
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+++ G + T +LS + +G + G+ +H ++++ G N + ALI MY++CG
Sbjct: 341 EIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCG 400
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
+ A +F+ M + NV +W++MI G A+HG+A ALE F M + +SPN VT++ VL
Sbjct: 401 NIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLS 460
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
AC+H G++ +G ++F M+ HGI P HY + D+L R+GHL+EA + +MPF+ +
Sbjct: 461 ACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADA 520
Query: 400 IVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVR 459
+VLR L A +H +G +LE +P ++++N +A G WE+V+ +R
Sbjct: 521 LVLRTFLGACRVHGNM---DLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIR 577
Query: 460 RFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ MK L K G SW+E+ +H+FY G S + IY L+ L L +K L +
Sbjct: 578 KKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLALKIKELGY 632
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 141/253 (55%), Gaps = 6/253 (2%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W+ LI YA +++ EA+ F DM G P E+ + V +AC+ ++ G +
Sbjct: 8 VSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIFGF 67
Query: 155 VTKSG-LDSDVYTNNNLVR-FYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
+ K+G +SDV L+ F A KVFD M +R+VV+W ++IT + +
Sbjct: 68 LLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSR 127
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
+AV F+ M G+ PD T+ V+SAC E+G LSLG+ H +++ G L+ +G +L+
Sbjct: 128 DAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLV 187
Query: 273 DMYAKC---GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE-EALELFSNMKNSSIS 328
DMYAKC G+V AR +F RM NV +W+A+I G Q G + EA+ELF M +
Sbjct: 188 DMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVK 247
Query: 329 PNYVTFLGVLCAC 341
PN+ TF VL AC
Sbjct: 248 PNHFTFSSVLKAC 260
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 90/166 (54%), Gaps = 3/166 (1%)
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
+R +VSW+ +I+ N EA+ F M + GF P+E V AC+ N+SLGK
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 252 VHLQLIERGTV-LNCQLGTALIDMYAKC-GAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
+ L++ G + +G ALIDM+ K G + A +F RM + NV TW+ MI Q
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
G++ +A++LF +M S P+ T GV+ AC G++ G R FH
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLG-RQFH 168
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 170/482 (35%), Positives = 262/482 (54%), Gaps = 10/482 (2%)
Query: 28 ARQCLS-FLKLCCSK-KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
+Q LS L+ SK K L +IHA + +G +L +L+ L ++ YAR +
Sbjct: 9 TKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLE--NLVVIGDMCYARQVF 66
Query: 86 CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL 145
+ ++ WN L +GY + P E++ ++ M+ G++P EFTYPFV+KA +++
Sbjct: 67 -DEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDF 125
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
+ G + A+V K G LV Y A +F+ M + +V+WN + VC
Sbjct: 126 SCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVC 185
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
V+ A+ YF KM + D T++ +LSAC +LG+L +G+ ++ + + N
Sbjct: 186 VQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNI 245
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
+ A +DM+ KCG AR+LF M++ NV +WS MI+G A +G + EAL LF+ M+N
Sbjct: 246 IVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNE 305
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEM--EHVHGIKPMRIHYHTMADILARAGHL 383
+ PNYVTFLGVL AC+HAG+V +G RYF M + ++P + HY M D+L R+G L
Sbjct: 306 GLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLL 365
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
+EAY FI MP +P+ + ALL A ++H +G +V L+E P V+++
Sbjct: 366 EEAYEFIKKMPVEPDTGIWGALLGACAVHRDMI---LGQKVADVLVETAPDIGSYHVLLS 422
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N YA G W+ V VR M+ +G KK+ S VE G IH F G S + IY+ L+
Sbjct: 423 NIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLD 482
Query: 504 TL 505
+
Sbjct: 483 EI 484
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/484 (32%), Positives = 257/484 (53%), Gaps = 9/484 (1%)
Query: 34 FLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
L C + L+ +IH+++ +G +D + L+ S ++ AR + V
Sbjct: 334 LLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISM--YSRCGSIKDARLVFDKMVR 391
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
V I W +I G A S EA+ V+ +M++ G++P TY +L AC+ + L G +
Sbjct: 392 KDV-ISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRR 450
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+ V ++GL +D + N LV Y C +DA +VFD M +R +V++N +I +
Sbjct: 451 IHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNL 510
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
EA+ F ++++ G +PD+ T + +L+AC G+L + +H + + G + +G A
Sbjct: 511 GKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNA 570
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
L+ YAKCG+ A ++F +M + NV +W+A+I G AQHG ++AL+LF MK + P+
Sbjct: 571 LVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPD 630
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
VTF+ +L AC+HAG++E+G RYF M I P HY M D+L RAG L EA I
Sbjct: 631 IVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALI 690
Query: 391 MNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVG 450
MPFQ N + ALL A IH V L+L+ + V +++ YA G
Sbjct: 691 KTMPFQANTRIWGALLGACRIHG---NVPVAERAAESSLKLDLDNAVVYVALSHMYAAAG 747
Query: 451 MWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
MW+ + +R+ M+ G+ K G SW+++G +H F + S + IY L+ L MK
Sbjct: 748 MWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMK 807
Query: 511 VLNF 514
+ +
Sbjct: 808 MKGY 811
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 197/388 (50%), Gaps = 8/388 (2%)
Query: 47 IHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+H++I +G ++D + LV+ + S K+ R + VN + I WN +I G A
Sbjct: 249 VHSRILNAGHESDTAVGTALVKMYAKCGSYKD---CRQVFEKLVNRDL-IAWNTMIGGLA 304
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
EA V+ M+R G+ P + TY +L AC + L+ G ++ + V K+G SD+
Sbjct: 305 EGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIG 364
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N L+ Y C +DA VFD M + V+SW +I ++ + EA+ + +M+ G
Sbjct: 365 VQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAG 424
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
EP+ T +L+AC+ L G+ +H Q++E G + +G L++MY+ CG+V AR
Sbjct: 425 VEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDAR 484
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F RM + ++ ++AMI G A H +EAL+LF ++ + P+ VT++ +L AC ++G
Sbjct: 485 QVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSG 544
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+E R H + G + + A+ G +A M + N I A+
Sbjct: 545 SLEWA-REIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMT-KRNVISWNAI 602
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEP 433
+ S+ H + QD + R ++ ++P
Sbjct: 603 IGGSAQH-GRGQDALQLFERMKMEGVKP 629
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 197/407 (48%), Gaps = 14/407 (3%)
Query: 32 LSFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
+SFL C S L +IH Q +GL D ++ ++ S + AR +
Sbjct: 130 MSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGS--IEEAREVFDKM 187
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
SV + W I GYA R A +F M++ G+ P TY VL A + + L G
Sbjct: 188 EKKSV-VSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
V + + +G +SD LV+ Y C +D +VF+ + R +++WN +I E
Sbjct: 247 KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 306
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+ EA + +M+ G P++ T +++L+AC L GK +H ++ + G + +
Sbjct: 307 GYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQ 366
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
ALI MY++CG++ ARL+F +M +V +W+AMI GLA+ G+ EAL ++ M+ + +
Sbjct: 367 NALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVE 426
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
PN VT+ +L AC+ +E G R H+ G+ +T+ ++ + G +K+A
Sbjct: 427 PNRVTYTSILNACSSPAALEWG-RRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQ 485
Query: 389 FIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
M Q + + A++ + H+ +G E + L+ G
Sbjct: 486 VFDRM-IQRDIVAYNAMIGGYAAHN------LGKEALKLFDRLQEEG 525
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 187/430 (43%), Gaps = 52/430 (12%)
Query: 21 NSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTY 80
+SD + ++C+ L + Q+H I D + L+ S +
Sbjct: 23 SSDYMKMLKRCIEVKDLVAGR----QVHQHIIQHRTVPDQYTVNALINMYIQCGS--IEE 76
Query: 81 ARSIL--CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKA 138
AR + +Y+ +V WN ++ GY +A+ + M++ G+ P T L +
Sbjct: 77 ARQVWKKLSYMERTVH-SWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSS 135
Query: 139 CAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSW 198
C L G ++ ++GL DV N ++ Y C +A +VFD M ++SVVSW
Sbjct: 136 CKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSW 195
Query: 199 NVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
+ I + A F KM+ G P+ T + VL+A + L GK VH +++
Sbjct: 196 TITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILN 255
Query: 259 RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALEL 318
G + +GTAL+ MYAKCG+ R +F ++ ++ W+ MI GLA+ GY EEA E+
Sbjct: 256 AGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEV 315
Query: 319 FSNMKNSSISPNYVTFLGVLCAC-----------------------------------NH 343
++ M+ + PN +T++ +L AC +
Sbjct: 316 YNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSR 375
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP---FQPNPI 400
G ++D F +M ++ I + M LA++G EA T M +PN +
Sbjct: 376 CGSIKDARLVFDKM-----VRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRV 430
Query: 401 VLRALLSASS 410
++L+A S
Sbjct: 431 TYTSILNACS 440
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 127/230 (55%), Gaps = 2/230 (0%)
Query: 113 AVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVR 172
AV V ++++G + Y +LK C E+ L G QV ++ + D YT N L+
Sbjct: 7 AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66
Query: 173 FYGSCRRKRDACKVFDDMC--ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDE 230
Y C +A +V+ + ER+V SWN ++ ++ ++ +A+ +M+ G PD
Sbjct: 67 MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126
Query: 231 TTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSR 290
TT++ LS+C G L G+ +H Q ++ G + + ++ +++MYAKCG++ AR +F +
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186
Query: 291 MEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
ME+ +V +W+ I G A G +E A E+F M+ + PN +T++ VL A
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNA 236
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 183/507 (36%), Positives = 263/507 (51%), Gaps = 15/507 (2%)
Query: 7 PTTNHIFPPKPSNCNSDLLSKAR---QCLSFLKLCCSKKHLY---QIHAQIQVSGLQNDA 60
P T P P + N L S S L+ C + L Q+H ++ VSGL D
Sbjct: 38 PNTGFAASPPPPSTNPRLASSPHAYHHHTSILQSCVASGSLRAGRQLHGRLLVSGLGPDT 97
Query: 61 QILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREA-VWVFID 119
+ +LV ++ + +AR + +V + WN LIR YA + PREA V ++
Sbjct: 98 VLSTKLVDL--YAACGQVGHARRLFDGMPKRNVFL-WNVLIRAYA-REGPREAAVRLYRG 153
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M G++P FTYP VLKACA + L G +V V+ + DV+ +V Y C
Sbjct: 154 MVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGC 213
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
DA VFD + R V WN +I +N EA+ M G P T++ +SA
Sbjct: 214 VDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSA 273
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
+ L G+ +H RG L +L T+L+DMYAK G V AR+LF ++ + + +W
Sbjct: 274 AADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSW 333
Query: 300 SAMILGLAQHGYAEEALELFSNMK-NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
+AMI G HG+A+EAL LF+ MK ++ ++P+ +TF+GVL ACNH GMVE+ +F+ M
Sbjct: 334 NAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMV 393
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD 418
+ + IKP HY + D+L G +EAY I M +P+ + ALL+ IH
Sbjct: 394 NAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIHK---NV 450
Query: 419 GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVEL 478
+G ++L+ELEP + N V ++N YA+ G WEK + VR+ M N GLKK+ SW+EL
Sbjct: 451 ELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEKAARVRKLMTNRGLKKILACSWIEL 510
Query: 479 GGSIHRFYSGYDSQVELAGIYQILETL 505
G H F G S IY LE L
Sbjct: 511 KGKTHGFLVGDASHPRSDEIYGELERL 537
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/495 (32%), Positives = 260/495 (52%), Gaps = 19/495 (3%)
Query: 16 KPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSS 75
KP+ + LL +S + C + K L QI A + QN+ ++ + + FCT + +
Sbjct: 15 KPNTETTSLLPLP-HLISLIPKCTTLKELKQIQAYTIKTNYQNNTNVITKFINFCTSNPT 73
Query: 76 KNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFV 135
K L + + + +N + RGYA + P + F RR
Sbjct: 74 KASMEHAHQLFDQITQPNIVLFNTMARGYARLNDPLRMITHF----RR-----------C 118
Query: 136 LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSV 195
L+ +++ L EG Q+ K G+ ++Y L+ Y +C + +VFD + E V
Sbjct: 119 LRLVSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCV 178
Query: 196 VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQ 255
V++N II N EA+ F +++++G +P + TMLVVLS+C LG+L LG+W+H
Sbjct: 179 VAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEY 238
Query: 256 LIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEA 315
+ + G ++ T LIDMYAKCG++ A +F M + + WSA+I+ A HG +A
Sbjct: 239 VKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQA 298
Query: 316 LELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMAD 375
+ + + MK + P+ +TFLG+L AC+H G+VE+G+ YFH M + +GI P HY M D
Sbjct: 299 ISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVD 358
Query: 376 ILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
+L RAG L EAY FI +P +P PI+ R LLSA S H +G V R+ EL+
Sbjct: 359 LLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACSTHG---NVEMGKRVIERIFELDDSH 415
Query: 436 SQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVEL 495
+ VI +N A G W+ V+++R+ M + G K+ G S +E+ +H F++G
Sbjct: 416 GGDYVIFSNLCARYGKWDDVNHLRKTMIDKGAVKIPGCSSIEVNNVVHEFFAGEGVHSTS 475
Query: 496 AGIYQILETLNLHMK 510
+++ L+ L +K
Sbjct: 476 TTLHRALDELVKELK 490
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/443 (37%), Positives = 250/443 (56%), Gaps = 16/443 (3%)
Query: 77 NLTYARSILCNYVN--DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEF 130
N+ LC+ D +P I + LI+GYA S R EA+ +F+ + R + P +F
Sbjct: 81 NMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHRE-VLPNQF 139
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
T+ VL+ACA + GLN G Q+ +V K GL SDV+ +N L+ Y C R ++ ++F +
Sbjct: 140 TFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAES 199
Query: 191 CERSVVSWNVIITVCVENLWLGE---AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLS 247
R+ V+WN TV V ++ LG+ A+ F+ M + + E T L AC L L
Sbjct: 200 PHRNDVTWN---TVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALE 256
Query: 248 LGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA 307
G +H ++ + + ALIDMYAKCG++ ARL+F M + + +W+AMI G +
Sbjct: 257 PGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYS 316
Query: 308 QHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
HG EAL +F M+ + + P+ +TF+GVL AC +AG+++ G YF M HGI+P
Sbjct: 317 MHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCI 376
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRR 427
HY M +L R GHL +A I +PFQP+ +V RALL A IH+ +G +R
Sbjct: 377 EHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHN---DIELGRISAQR 433
Query: 428 LLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYS 487
+LE+EP+ V+++N YA W+ V++VR+ MK G+KK G+SW+E G++H F
Sbjct: 434 VLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTV 493
Query: 488 GYDSQVELAGIYQILETLNLHMK 510
G S E+ I +LE L++ K
Sbjct: 494 GDTSHPEVRVINGMLEWLHMKTK 516
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 146/305 (47%), Gaps = 12/305 (3%)
Query: 125 IKPTEF---TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKR 181
+ P+EF Y L+ C + + G + + K G D++ N L+ Y
Sbjct: 31 VSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLC 90
Query: 182 DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
DA K+FD+M ER+ +S+ +I E++ EA+ FV++ P++ T VL AC
Sbjct: 91 DASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREVL-PNQFTFASVLQACA 149
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
+ L+LG +H +I+ G + + AL+D+YAKCG + + LF+ N TW+
Sbjct: 150 TMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNT 209
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
+I+G Q G E+AL LF NM + VT+ L AC +E G + H +
Sbjct: 210 VIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQ-IHSLTVKT 268
Query: 362 GIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVG 421
+ + + D+ A+ G +K+A + ++ + + + A++S S+H G+G
Sbjct: 269 TFDKDIVVTNALIDMYAKCGSIKDA-RLVFDLMNKQDEVSWNAMISGYSMH------GLG 321
Query: 422 NEVRR 426
E R
Sbjct: 322 REALR 326
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 14/213 (6%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S L+ C S L QIH+ + D + L+ + ++ AR + + +
Sbjct: 244 SALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDM--YAKCGSIKDARLVF-DLM 300
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
N + WN +I GY+ REA+ +F M+ +KP + T+ VL ACA L++G
Sbjct: 301 NKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQ 360
Query: 150 Q-VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVCV- 206
+ + G++ + +V G A K+ D++ + SV+ W ++ CV
Sbjct: 361 AYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVI 420
Query: 207 -ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
++ LG V L EP + V+LS
Sbjct: 421 HNDIELGRISAQRV----LEMEPQDKATHVLLS 449
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 173/474 (36%), Positives = 246/474 (51%), Gaps = 16/474 (3%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPWNNLI 101
++H+ + +G + DA + L+ T + + V D +P W I
Sbjct: 129 KMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFK-------VFDDIPDKNFASWTATI 181
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
GY + REA+ +F + G++P F+ VL AC L G + +T++G+
Sbjct: 182 SGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMV 241
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
+V+ LV FYG C A VFD M E+++VSW+ +I N EA+ F KM
Sbjct: 242 RNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKM 301
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQLGTALIDMYAKCGA 280
+ G +PD M+ VL +C LG L LG W LI L N LGTALIDMYAKCG
Sbjct: 302 LNEGLKPDCYAMVGVLCSCARLGALELGDWAS-NLINGNEFLDNSVLGTALIDMYAKCGR 360
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
+ A +F M + + W+A I GLA G+ ++AL LF M+ S I P+ TF+G+LCA
Sbjct: 361 MDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCA 420
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPI 400
C HAG+VE+G RYF+ ME V + P HY M D+L RAG L EA+ I +MP + N I
Sbjct: 421 CTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAI 480
Query: 401 VLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRR 460
V ALL +H V V ++L+ LEP S N V+++N YA WE+ + +R
Sbjct: 481 VWGALLGGCRLHRDTQLVEV---VLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRS 537
Query: 461 FMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
M G+KK+ G SW+E+ G +H+F G S IY L L +K +
Sbjct: 538 IMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGY 591
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 174/309 (56%), Gaps = 3/309 (0%)
Query: 42 KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
KHL IHA + GL D +L +++RF + N Y+ IL + + +N +I
Sbjct: 24 KHLKHIHAALLRLGLDEDTYLLNKVLRFSF--NFGNTNYSFRIL-DQTKEPNIFLFNTMI 80
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
RG +D +E++ ++ M++ G+ P FT+PFVLKACA + G+++ + V K+G +
Sbjct: 81 RGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCE 140
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
+D + +L+ Y C +A KVFDD+ +++ SW I+ V EA+ F ++
Sbjct: 141 ADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRL 200
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
++G PD +++ VLSAC G+L G+W+ + E G V N + TAL+D Y KCG +
Sbjct: 201 LEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNM 260
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
AR +F M E N+ +WS+MI G A +G +EAL+LF M N + P+ +GVLC+C
Sbjct: 261 ERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSC 320
Query: 342 NHAGMVEDG 350
G +E G
Sbjct: 321 ARLGALELG 329
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 111/244 (45%), Gaps = 1/244 (0%)
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
+ A + + GLD D Y N ++RF + + ++ D E ++ +N +I V N
Sbjct: 28 HIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLND 87
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
E++ + M+ G PD T VL AC + + LG +H +++ G + +
Sbjct: 88 CFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKI 147
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
+LI++Y KCG + A +F + + N +W+A I G G EA+++F + + P
Sbjct: 148 SLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRP 207
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
+ + + VL AC G + G + E +G+ + D + G+++ A +
Sbjct: 208 DSFSLVEVLSACKRTGDLRSG-EWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSV 266
Query: 390 IMNM 393
M
Sbjct: 267 FDGM 270
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 174/477 (36%), Positives = 247/477 (51%), Gaps = 9/477 (1%)
Query: 32 LSFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
LS L C + + L +HAQ +GL +D ++ L+R T S + AR + N
Sbjct: 263 LSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGS--IEGARRVFDNM 320
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
V + W +I GYA + +A +F M+ GI+P TY ++ ACA + LN
Sbjct: 321 KVRDV-VSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHA 379
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
++ + V +G +D+ + LV Y C +DA +VFD M R VVSW+ +I VEN
Sbjct: 380 REIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVEN 439
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+ EA F MK EPD T + +L+AC LG L +G ++ Q I+ V + LG
Sbjct: 440 GYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLG 499
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
ALI M AK G+V AR +F M +V TW+AMI G + HG A EAL LF M
Sbjct: 500 NALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFR 559
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
PN VTF+GVL AC+ AG V++G R+F + GI P Y M D+L RAG L EA
Sbjct: 560 PNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAEL 619
Query: 389 FIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAE 448
I +MP +P + +LL A IH V R L ++P V +++ YA
Sbjct: 620 LIKSMPVKPTSSIWSSLLVACRIHG---NLDVAERAAERCLMIDPYDGAVYVQLSHMYAA 676
Query: 449 VGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
GMWE V+ VR+ M++ G++K +G +W+E+ G +H F S + IY L L
Sbjct: 677 AGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARL 733
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 193/388 (49%), Gaps = 16/388 (4%)
Query: 32 LSFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
LS L C S L ++HAQ+ +G +D +I LV S + AR +
Sbjct: 162 LSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGS--MDDARQVFDGL 219
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
V +N ++ GYA S +A +F M++ G+KP + ++ +L C L G
Sbjct: 220 HIRDVS-TFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWG 278
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
V A +GL D+ +L+R Y +C A +VFD+M R VVSW V+I EN
Sbjct: 279 KAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAEN 338
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+ +A G F M++ G +PD T + +++AC NL+ + +H Q+ G + +
Sbjct: 339 GNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVS 398
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
TAL+ MYAKCGA+ AR +F M +V +WSAMI ++GY EA E F MK S+I
Sbjct: 399 TALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIE 458
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL----ARAGHLK 384
P+ VT++ +L AC H G ++ G + IK + + + + L A+ G ++
Sbjct: 459 PDGVTYINLLNACGHLGALDVGMEIY-----TQAIKADLVSHVPLGNALIIMNAKHGSVE 513
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIH 412
A +I + + + I A++ S+H
Sbjct: 514 RA-RYIFDTMVRRDVITWNAMIGGYSLH 540
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 190/384 (49%), Gaps = 23/384 (5%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+ I G Q + L L++ ++ N+T AR I + N +V + WN LI GYA
Sbjct: 78 QVRDHIIQGGRQLNIYELNTLIKLYSICG--NVTEARQIFDSVENKTV-VTWNALIAGYA 134
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+EA +F M G++P+ T+ VL AC+ +GLN G +V A V +G SD
Sbjct: 135 QVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFR 194
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
LV Y DA +VFD + R V ++NV++ ++ +A F +M+ +G
Sbjct: 195 IGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVG 254
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+P++ + L +L C L+ GK VH Q + G V + ++ T+LI MY CG++ AR
Sbjct: 255 LKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGAR 314
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC---- 341
+F M+ +V +W+ MI G A++G E+A LF+ M+ I P+ +T++ ++ AC
Sbjct: 315 RVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISA 374
Query: 342 --NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
NHA R H + G + + + A+ G +K+A MP
Sbjct: 375 NLNHA-------REIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMP----- 422
Query: 400 IVLRALLSASSIHDAKYQDGVGNE 423
R ++S S++ A ++G G E
Sbjct: 423 --RRDVVSWSAMIGAYVENGYGTE 444
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 117/211 (55%)
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
TY + + C E+ G QV+ ++ + G ++Y N L++ Y C +A ++FD +
Sbjct: 59 TYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSV 118
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
++VV+WN +I + + EA F +M D G EP T L VL AC+ L+ GK
Sbjct: 119 ENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGK 178
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
VH Q++ G V + ++GTAL+ MY K G++ AR +F + +V T++ M+ G A+ G
Sbjct: 179 EVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSG 238
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
E+A ELF M+ + PN ++FL +L C
Sbjct: 239 DWEKAFELFYRMQQVGLKPNKISFLSILDGC 269
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 108/252 (42%), Gaps = 39/252 (15%)
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
++ + G D T + + CTEL + +LGK V +I+ G LN LI +Y+ CG
Sbjct: 47 RLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICG 106
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
V AR +F +E V TW+A+I G AQ G+ +EA LF M + + P+ +TFL VL
Sbjct: 107 NVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLD 166
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
AC+ + G KE + ++ F +
Sbjct: 167 ACSSPAGLNWG---------------------------------KEVHAQVVTAGFVSDF 193
Query: 400 IVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVR 459
+ AL+S + G ++ R+ L R ++ YA+ G WEK +
Sbjct: 194 RIGTALVS------MYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELF 247
Query: 460 RFMKNVGLKKMK 471
M+ VGLK K
Sbjct: 248 YRMQQVGLKPNK 259
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 176/508 (34%), Positives = 268/508 (52%), Gaps = 19/508 (3%)
Query: 14 PPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLS 73
P P S + + CL L + L Q A + SGL ++ +L L +
Sbjct: 8 PSAPRLSPSAARAAEQHCLRLLAASSTPTSLLQSVAFLLKSGLHANSLVLTRLFAASASA 67
Query: 74 SSKNLTYARSILCNYVNDSVPIPW---NNLIRGYAWSD----RPREAVWVFIDMKRRGIK 126
+ L ++ + SVP+ N LIR +A S R R A + F M R +
Sbjct: 68 APALLD---PLVAALLRPSVPLDAFLANTLIRAHATSPIHSLRLRAAAF-FPLMLRGAVV 123
Query: 127 PTEFTYPFVLKACAEISGLNE-GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKR---D 182
P +FT+PF+LKACA + G + G+Q A K G +D Y +N L+ Y SC D
Sbjct: 124 PNKFTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTLIHMY-SCFGGGFLGD 182
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
A VFD M + S V+W+ +I V +AV F +M+ G + DE T++ VL+A T+
Sbjct: 183 ARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVELFREMQANGVQADEVTVIGVLAAATD 242
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
LG L L +WV + G + L ALID AKCG V A +F M++ +V +W+++
Sbjct: 243 LGALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSV 302
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
I LA G +EA+ +F MK + + P+ V F+GVL AC+HAGMV++G YF M+ +G
Sbjct: 303 IDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYG 362
Query: 363 IKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGN 422
I+P HY M D+ RAG ++ A F+ MP QPNP++ R+L+SA H + +G
Sbjct: 363 IEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSLVSACRAHG---RLELGE 419
Query: 423 EVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSI 482
+ R LL P N ++++N +A W++ S +RR M G+KK+ G S VEL G +
Sbjct: 420 SITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSEIRREMSKRGIKKVPGCSIVELDGEV 479
Query: 483 HRFYSGYDSQVELAGIYQILETLNLHMK 510
H F +G +S + IY+++E + ++
Sbjct: 480 HEFIAGDESHPQYKDIYRMVEEMARELR 507
>gi|356519586|ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 169/466 (36%), Positives = 257/466 (55%), Gaps = 9/466 (1%)
Query: 42 KHLYQIHAQIQVSGLQNDAQILKELVRFCTLS-SSKNLTYARSILCNYVNDSVPIPWNNL 100
+ L Q HA + V+G +L +L+ TLS ++ ++ Y R + V+D +N+L
Sbjct: 24 RRLQQAHAHLVVTGCHRSRALLTKLL---TLSCAAGSIAYTRRLF-RSVSDPDSFLFNSL 79
Query: 101 IRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGL 160
I+ + +AV+ + M I P+ +T+ V+KACA++S L G V ++V SG
Sbjct: 80 IKASSNFGFSLDAVFFYRRMLHSRIVPSTYTFTSVIKACADLSLLRLGTIVHSHVFVSGY 139
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK 220
S+ + LV FY R A KVFD+M +RS+++WN +I+ +N EAV F K
Sbjct: 140 ASNSFVQAALVTFYAKSCTPRVARKVFDEMPQRSIIAWNSMISGYEQNGLASEAVEVFNK 199
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
M++ G EPD T + VLSAC++LG+L LG W+H ++ G +N L T+L++M+++CG
Sbjct: 200 MRESGGEPDSATFVSVLSACSQLGSLDLGCWLHECIVGTGIRMNVVLATSLVNMFSRCGD 259
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
VG AR +F M E NV +W+AMI G HGY EA+E+F MK + PN VT++ VL A
Sbjct: 260 VGRARAVFDSMNEGNVVSWTAMISGYGMHGYGVEAMEVFHRMKACGVVPNRVTYVAVLSA 319
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP-NP 399
C HAG++ +G F M+ +G+ P H+ M D+ R G L EAY F+ + + P
Sbjct: 320 CAHAGLINEGRLVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVRGLSSEELVP 379
Query: 400 IVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVR 459
V A+L A +H +G EV L+ EP + V+++N YA G ++V +VR
Sbjct: 380 AVWTAMLGACKMHK---NFDLGVEVAENLISAEPENPGHYVLLSNMYALAGRMDRVESVR 436
Query: 460 RFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
M GLKK G S +++ + F G S E IY L+ L
Sbjct: 437 NVMIQRGLKKQVGYSTIDVENRSYLFSMGDKSHPETNEIYCYLDEL 482
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 173/490 (35%), Positives = 252/490 (51%), Gaps = 22/490 (4%)
Query: 35 LKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP 94
++ CC + +IH + GL+ D + LV T + ++ A+ + V
Sbjct: 120 VRTCCEVMEVKKIHGCLLKMGLELDVFVGSALVN--TYLKNGSMEDAQKVFGELSIRDV- 176
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I GYA EA+ VF M +G+ P+ FT +L A L+ G V
Sbjct: 177 VLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGI 236
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V K G DS V +N L+ YG C+ DA +F+ + E+ + SWN II+V +
Sbjct: 237 VMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGT 296
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLI--------ERGTVLNCQ 266
+ F KM G PD T+ VL AC+ L L G+ +H +I E G V N
Sbjct: 297 LRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLL 356
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+ A++DMYAKCG++ A +F M + +V +W+ MI+G HGYA EAL +FS M +
Sbjct: 357 VSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAE 416
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
PN VT +GVL ACNHAG V G + +ME G+ P HY + D+L RAGHL++A
Sbjct: 417 FKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDA 476
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKY 446
Y + MP Q NP+V RALL A +H + R++L+LEP + V+++N Y
Sbjct: 477 YEIVQKMPIQANPVVWRALLGACRLHGNAE---LAEIAARQVLQLEPEHCGSYVLMSNVY 533
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQIL---- 502
+G +E+V VR+ MK +KK G SW+EL +H F +G + EL + L
Sbjct: 534 GVIGRYEEVLEVRKTMKEQNVKKTPGCSWIELKDGVHVFRTGDRTHSELNALTNQLCDIG 593
Query: 503 ----ETLNLH 508
E LNL+
Sbjct: 594 FILDEVLNLY 603
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 163/343 (47%), Gaps = 9/343 (2%)
Query: 24 LLSKARQCLSFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTY 80
+L+ +C++FL+ C ++L Q+H+ + G + L+ S +
Sbjct: 7 MLNNVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINM--YSKCGQMGE 64
Query: 81 ARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACA 140
A + + ++ +N +I G+ + + + M+ G+ P ++T+P V++ C
Sbjct: 65 AILVFYDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCC 124
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
E+ E ++ + K GL+ DV+ + LV Y DA KVF ++ R VV WN
Sbjct: 125 EVM---EVKKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNA 181
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
+I + L EA+ F +M G P T+ +LS G+L GK VH +++ G
Sbjct: 182 MINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMG 241
Query: 261 TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS 320
+ ALIDMY KC +G A ++F + E ++++W+++I Q G + L LF
Sbjct: 242 YDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFD 301
Query: 321 NMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
M S I P+ VT VL AC+H + G R H ++G+
Sbjct: 302 KMLGSGILPDLVTITTVLPACSHLAALMHG-REIHGYMIINGL 343
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 133/259 (51%), Gaps = 19/259 (7%)
Query: 136 LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC-ERS 194
L++CA+ LN+G Q+ + + G + +L+ Y C + +A VF D C ER+
Sbjct: 18 LQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERN 77
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHL 254
V ++N II+ V N + ++ KM+ G PD+ T V+ C E+ + K +H
Sbjct: 78 VFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV---KKIHG 134
Query: 255 QLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEE 314
L++ G L+ +G+AL++ Y K G++ A+ +F + +V W+AMI G A+ G +E
Sbjct: 135 CLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDE 194
Query: 315 ALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT-- 372
ALE+F M ++P+ T G+L G +++G + VHGI M++ Y +
Sbjct: 195 ALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNG-------KTVHGI-VMKMGYDSGV 246
Query: 373 -----MADILARAGHLKEA 386
+ D+ + H+ +A
Sbjct: 247 SVSNALIDMYGKCKHIGDA 265
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 162/492 (32%), Positives = 252/492 (51%), Gaps = 34/492 (6%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW 97
C ++ L QIHA++ +GL D+ + + + C S+S + I+ + + W
Sbjct: 53 CSKQEELKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFLW 112
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N +IRG++ SD P ++ ++ M +T+P +LKAC+ +S L E Q+ A +TK
Sbjct: 113 NLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITK 172
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFD----------------------------- 188
G ++DVY N+L+ Y + + A +FD
Sbjct: 173 LGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTL 232
Query: 189 --DMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNL 246
M E++ +SW +I+ V+ EA+ F +M++ EPD ++ LSAC +LG L
Sbjct: 233 FRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGAL 292
Query: 247 SLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGL 306
GKW+H L + ++ LG LIDMYAKCG +G A +F ++ +V W+A+I G
Sbjct: 293 EQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGY 352
Query: 307 AQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPM 366
A HG+ EA+ F M+ I PN +TF VL AC++ G+VE+G F+ ME + +KP
Sbjct: 353 AYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPT 412
Query: 367 RIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRR 426
HY + D+L+RAG L EA FI MP +PN ++ ALL A IH +G E+
Sbjct: 413 IEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHK---NIELGEEIGE 469
Query: 427 RLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFY 486
L+ ++P V AN +A W+K + RR MK G+ K+ G S + L G+ H F
Sbjct: 470 ILIAIDPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFL 529
Query: 487 SGYDSQVELAGI 498
+G S E+ I
Sbjct: 530 AGDRSHPEIEKI 541
>gi|242069679|ref|XP_002450116.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
gi|241935959|gb|EES09104.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
Length = 597
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 160/421 (38%), Positives = 229/421 (54%), Gaps = 5/421 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W LI Y + R EA+ V G++P FT VL ACA ++ L G +V
Sbjct: 143 VSWTALITAYMDAGRGLEAIGVARSAFASGVRPDSFTAVRVLTACARVADLVTGEEVWTA 202
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K G+ +V+ V Y C A VFD M + VV+W ++ N EA
Sbjct: 203 AEKEGIAGNVFVATAAVDLYVKCGEMDKARGVFDKMKNKDVVAWGAMVGGYASNGHPREA 262
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQLGTALID 273
+ F M+ G PD T+ LSACT LG L LG+ V + +++ VL N LGTALID
Sbjct: 263 LELFFAMQVEGMRPDCYTVAGALSACTRLGALDLGRRV-VGMLQWDEVLGNPVLGTALID 321
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MYAKCG+ G A ++F +M ++ W+AMILGL G+ + A L MK S ++ N T
Sbjct: 322 MYAKCGSTGEAWMVFQKMRNRDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGMTLNDNT 381
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
F+G+LC+C H G+V+DG RYF M ++ I+P HY M D+L+RAG L+EA+ I +M
Sbjct: 382 FIGLLCSCTHTGLVKDGRRYFRNMTQLYHIRPRIEHYGIMVDLLSRAGLLQEAHQLIQDM 441
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
P + N +V ALL IH + V ++L++LEP S N V+++N Y+ G WE
Sbjct: 442 PMEANAVVWGALLGGCKIH---RNADLAEHVLKQLIQLEPWNSGNYVVLSNIYSNSGRWE 498
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLN 513
+ +R MK G++K+ SWVEL G +H F+ G S IY L+ L + MK +
Sbjct: 499 DAAKLRLEMKAKGVEKVPASSWVELDGKVHEFHVGDKSHPLSDQIYAKLDELGMEMKAMG 558
Query: 514 F 514
+
Sbjct: 559 Y 559
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 116/228 (50%), Gaps = 2/228 (0%)
Query: 127 PTEFTYPFVLKACAEISG-LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACK 185
P+ T+PF +K+ + + L G Q+ A K S+ + +L+ Y C R DA K
Sbjct: 72 PSHLTFPFAIKSASRLPDPLTAGAQLHARSLKLPSHSNPHVLTSLLNLYARCGRLHDAQK 131
Query: 186 VFDDMCE-RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELG 244
FD+M + S VSW +IT ++ EA+G G PD T + VL+AC +
Sbjct: 132 AFDEMRQPPSTVSWTALITAYMDAGRGLEAIGVARSAFASGVRPDSFTAVRVLTACARVA 191
Query: 245 NLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMIL 304
+L G+ V + G N + TA +D+Y KCG + AR +F +M+ +V W AM+
Sbjct: 192 DLVTGEEVWTAAEKEGIAGNVFVATAAVDLYVKCGEMDKARGVFDKMKNKDVVAWGAMVG 251
Query: 305 GLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR 352
G A +G+ EALELF M+ + P+ T G L AC G ++ G R
Sbjct: 252 GYASNGHPREALELFFAMQVEGMRPDCYTVAGALSACTRLGALDLGRR 299
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 149/419 (35%), Positives = 237/419 (56%), Gaps = 12/419 (2%)
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P I W +I Y+ ++A+ + + M R G++P +TY VL+AC +G++
Sbjct: 72 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRAC---NGMS 128
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
+ + + K GL+SDVY + L+ + DA VFD+M + WN II
Sbjct: 129 DVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 188
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+N A+ F +MK GF ++ T+ VL ACT L L LG H+ +++ L
Sbjct: 189 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDL--I 246
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
L AL+DMY KCG++ AR +F++M+E +V TWS MI GLAQ+GY++EAL+LF MK+S
Sbjct: 247 LNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSG 306
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
PNY+T +GVL AC+HAG++EDG+ YF M+ ++GI P R HY M D+L +AG L +A
Sbjct: 307 TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDA 366
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKY 446
+ M +P+ + R LL A + + ++++ L+P + +++N Y
Sbjct: 367 VKLLNEMECEPDAVTWRTLLGACRVQRNMV---LAEYAAKKVIALDPEDAGTYTVLSNIY 423
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
A W+ V +R+ M+++G+KK G SW+E+ IH F G +S ++ + + L L
Sbjct: 424 ANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIGDESHPQIVEVNKKLNQL 482
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 148/320 (46%), Gaps = 17/320 (5%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
++ G+ TY ++K C ++EG + ++ +G ++ N L+ Y
Sbjct: 4 LQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNL 63
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
DA ++FD M +R+V+SW +I+ + +A+ V M G P+ T VL A
Sbjct: 64 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRA 123
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C + ++ + +H +I+ G + + +ALID++AK G A +F M + W
Sbjct: 124 CNGMSDVRM---LHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 180
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+++I G AQ+ ++ ALELF MK + T VL AC ++E G + H
Sbjct: 181 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQ-----AH 235
Query: 360 VHGIKPMR--IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQ 417
VH +K + I + + D+ + G L++A N + R +++ S++ Q
Sbjct: 236 VHIVKYDQDLILNNALVDMYCKCGSLEDARRVF-------NQMKERDVITWSTMISGLAQ 288
Query: 418 DGVGNEVRRRLLELEPRGSQ 437
+G E + ++ G++
Sbjct: 289 NGYSQEALKLFELMKSSGTK 308
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 9/204 (4%)
Query: 39 CSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWN 98
C+ L ++ Q V ++ D ++ +L AR + N + + I W+
Sbjct: 222 CTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDARRVF-NQMKERDVITWS 280
Query: 99 NLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK- 157
+I G A + +EA+ +F MK G KP T VL AC+ L +G ++ K
Sbjct: 281 TMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKL 340
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVC--VENLWLGEA 214
G++ ++ G + DA K+ ++M CE V+W ++ C N+ L E
Sbjct: 341 YGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAE- 399
Query: 215 VGYFVKMKDLGFEPDETTMLVVLS 238
+ K + +P++ VLS
Sbjct: 400 ---YAAKKVIALDPEDAGTYTVLS 420
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 160/471 (33%), Positives = 253/471 (53%), Gaps = 6/471 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGY 104
Q+H+Q GL D + L+ + S ++ AR I ++ +V W +I GY
Sbjct: 292 QLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNV-FSWTAMITGY 350
Query: 105 AW-SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD 163
EA+ +F M + P FT+ LKACA ++ L G QV + K G S
Sbjct: 351 VQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSV 410
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
N+L+ Y R DA K FD + E++++S+N +I +NL EA+ F +++D
Sbjct: 411 NCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIED 470
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G T +LS +G + G+ +H ++I+ G LN + ALI MY++CG +
Sbjct: 471 QGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIES 530
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A +F ME+ NV +W+++I G A+HG+A +ALELF M + PN VT++ VL AC+H
Sbjct: 531 AFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSH 590
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
G+V +G+++F M HG+ P HY + DIL R+G L EA FI +MP++ + +V R
Sbjct: 591 VGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWR 650
Query: 404 ALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMK 463
L A +H +G + ++E EP ++++N YA + W++VSN+R+ MK
Sbjct: 651 TFLGACRVHG---NLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMK 707
Query: 464 NVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
L K G SWVE+ +H+FY G S + A IY L+ L++ +K L +
Sbjct: 708 EKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGY 758
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 203/411 (49%), Gaps = 19/411 (4%)
Query: 34 FLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
FLK C + +H ++ S LQ D+ L L+ S A SI +
Sbjct: 72 FLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISL--YSKCGQWEKATSIFRLMGS 129
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
I W+ ++ +A ++ A+ F+DM G P E+ + +AC+ ++ G
Sbjct: 130 SRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDS 189
Query: 151 VQANVTKSG-LDSDVYTNNNLVRFYGSCRRKR-DACKVFDDMCERSVVSWNVIITVCVEN 208
+ V K+G L SDV L+ + R A KVF+ M ER+ V+W ++IT ++
Sbjct: 190 IFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQF 249
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+ GEA+ F+ M G+EPD T+ V+SAC + L LG+ +H Q I G L+ +G
Sbjct: 250 GYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVG 309
Query: 269 TALIDMYAKC---GAVGCARLLFSRMEEINVWTWSAMILGLAQH-GYAEEALELFSNMKN 324
LI+MYAKC G++ AR +F ++ + NV++W+AMI G Q GY EEAL+LF M
Sbjct: 310 CCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMIL 369
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ + PN+ TF L AC + + G + F + G + +++ + AR+G +
Sbjct: 370 THVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKL-GFSSVNCVANSLISMYARSGRID 428
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
+A ++ F+ N L+S +++ DA ++ E E+E +G
Sbjct: 429 DARK-AFDILFEKN------LISYNTVIDAYAKNLNSEEALELFNEIEDQG 472
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 123/262 (46%), Gaps = 4/262 (1%)
Query: 109 RPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNN 168
R +A+ M +G P TY LK C + G V +T+S L D T N
Sbjct: 46 RLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLN 105
Query: 169 NLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
+L+ Y C + A +F M R ++SW+ +++ N A+ FV M + G+
Sbjct: 106 SLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYY 165
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQLGTALIDMYAKC-GAVGCAR 285
P+E AC+ +S+G + +I+ G + + +G LIDM+ K G + A
Sbjct: 166 PNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAF 225
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F +M E N TW+ MI L Q GYA EA++LF +M S P+ T GV+ AC +
Sbjct: 226 KVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANME 285
Query: 346 MVEDGYRYFHEMEHVHGIKPMR 367
++ G + H HG+ R
Sbjct: 286 LLLLG-QQLHSQAIRHGLTLDR 306
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 63/150 (42%), Gaps = 1/150 (0%)
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
+ N L +A+ M G PD T + L C + +G VH +L + L+
Sbjct: 42 INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRM-EEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+LI +Y+KCG A +F M ++ +WSAM+ A + AL F +M
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYF 354
+ PN F AC+ A V G F
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIF 191
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 167/474 (35%), Positives = 246/474 (51%), Gaps = 7/474 (1%)
Query: 33 SFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDS 92
S K C + QIH G +D L+ S+ L AR + + + D
Sbjct: 93 SLFKSCRNSSEGKQIHCHSTKLGFASDTYAQNTLMNM--YSNCGCLVSARKVF-DKMEDK 149
Query: 93 VPIPWNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
+ W +I +A D+P EAV +F M K +KP E T VL ACA L ++
Sbjct: 150 TVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRI 209
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
+ + G V N L+ Y C + A +FD E+++ SWN++I VE+
Sbjct: 210 HEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNY 269
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
EA+ F +M+ G + D+ TM +L ACT LG L LGKW+H + ++ ++ LGTAL
Sbjct: 270 EEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTAL 329
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
+DMYAKCG++ A +F M E +V TW+A+ILGLA G AE AL+ F M + P+
Sbjct: 330 VDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDA 389
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
+TF+GVL AC+HAG V++G +F+ M +GI+P HY + DIL RAG + EA I
Sbjct: 390 ITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIK 449
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGM 451
+MP P+ VL LL A IH ++LLE++P S V+++N Y
Sbjct: 450 SMPMAPDQFVLGGLLGACRIHG---NLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKK 506
Query: 452 WEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
WE+ R M G++K G S +E+ G +H F G S + + I ++LE +
Sbjct: 507 WEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLEDM 560
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 123/358 (34%), Positives = 185/358 (51%), Gaps = 16/358 (4%)
Query: 43 HLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIR 102
L QIHAQ+ +GL D ++V FC+L S +L YAR + N + N++IR
Sbjct: 3 QLKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPT-SYTCNSIIR 61
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
G + +EA+ + +M +G+ P +T+P + K+C S EG Q+ + TK G S
Sbjct: 62 GCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSS---EGKQIHCHSTKLGFAS 118
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK-M 221
D Y N L+ Y +C A KVFD M +++VVSW +I V + EAV F + M
Sbjct: 119 DTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMM 178
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
K +P+E T++ VL+AC +L++ K +H + E G + L T L+D+Y KCG V
Sbjct: 179 KSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCV 238
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
AR LF + +E N+++W+ MI G + EEAL LF M+ I + VT +L AC
Sbjct: 239 QLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLAC 298
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYH-----TMADILARAGHLKEAYTFIMNMP 394
H G +E G ++ H IK RI + D+ A+ G ++ A MP
Sbjct: 299 THLGALELG-KWLHAY-----IKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMP 350
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 172/487 (35%), Positives = 254/487 (52%), Gaps = 19/487 (3%)
Query: 33 SFLKLCC--SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLS--SSKNLTYA----RSI 84
SFL C S H Q+HA + +G Q I + L S NL++A I
Sbjct: 7 SFLSKCTTLSLPHTKQLHAHLFTTG-QFRLPISPARSKLLELYALSLGNLSFAILTFSQI 65
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
ND WN +IRG+ S P A + M + K T FVLKACA +
Sbjct: 66 RTPSTND-----WNAIIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFVLKACARVLA 120
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
E +Q+ ++ + G +D L+ Y A KVFD+M +R + SWN +I+
Sbjct: 121 RLESIQIHTHIVRKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISG 180
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
+ EA+ F +M+ GF+P+E ++L LSAC +LG+ G+ +H + +N
Sbjct: 181 FAQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMN 240
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEALELFSNMK 323
Q+ +IDMYAKCG V A L+F M ++ TW+ MI+ A HG +ALELF M
Sbjct: 241 AQVCNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMD 300
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
S +SP+ V++L VLCACNH G+VE+G+R F+ ME+ G+KP HY ++ D+L RAG L
Sbjct: 301 QSGVSPDDVSYLAVLCACNHGGLVEEGFRLFNSMENC-GVKPNVKHYGSVVDLLGRAGRL 359
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
EAY + +MP P+ ++ + LL AS H + V R+L+E+ + V+++
Sbjct: 360 HEAYDIVNSMPTVPDIVLWQTLLGASRTH---RNVEIAETVSRKLVEMGSNHCGDFVLLS 416
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N YA W V VR MKN +KK+ G+S++E G IH+FY+ S IY L+
Sbjct: 417 NVYAARERWADVGRVREAMKNRDVKKVPGLSYIEGNGVIHKFYNADKSHESWREIYAKLD 476
Query: 504 TLNLHMK 510
+ +K
Sbjct: 477 EIRFRVK 483
>gi|242032459|ref|XP_002463624.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
gi|241917478|gb|EER90622.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
Length = 607
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 186/510 (36%), Positives = 268/510 (52%), Gaps = 19/510 (3%)
Query: 13 FPPKPSNCNSDLLSKA--RQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFC 70
FP P+ C+ ++A + CL L+ + + Q A + SGL + +L L
Sbjct: 10 FPTAPAWCHPPSAARAAEQHCLHLLERSSAPAAVLQSLAFLLKSGLHANPLVLTRLFASS 69
Query: 71 TLSSSKNLTYARSILCNYVNDSVPIPW---NNLIRGYAWSDRPR---EAVWVFIDMKRRG 124
++ L + L + SVPI N LIR +A S P A F M R
Sbjct: 70 AAAAPALLEPLVAAL---LRPSVPIDAFLVNTLIRAHAASPLPSARLRAAAFFPLMLRSA 126
Query: 125 IKPTEFTYPFVLKACAEISGL-NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKR-- 181
+ P +FT+PF+LKACA + G G+Q A K G +D Y +N L+ Y SC
Sbjct: 127 VLPNKFTFPFLLKACAALPGFPGVGLQAHAAALKFGFATDQYVSNTLIHMY-SCFGGEFL 185
Query: 182 -DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
DA VFD M + SVV+W+ +I V +AVG F +M+ G PDE T++ VL+A
Sbjct: 186 GDARNVFDRMDKSSVVTWSAMIGGYVRGGLSSDAVGLFREMQASGVRPDEVTVIGVLAAA 245
Query: 241 TELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
+LG L L +WV + G + L ALID AKCG V A +F MEE V +W+
Sbjct: 246 ADLGALELARWVGRFVEREGIGKSVTLCNALIDALAKCGDVDGAVAVFQGMEERTVVSWT 305
Query: 301 AMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHV 360
++I LA G +EA+ +F MK + + P+ V F+GVL AC+HAGMV++GY YF M+
Sbjct: 306 SVIDALAMEGRGKEAVAVFEAMKTAGVRPDDVVFIGVLTACSHAGMVDEGYGYFDSMKME 365
Query: 361 HGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGV 420
+GI P HY M D+ RAG ++ A FI MP +PNPI+ R L++A H + +
Sbjct: 366 YGIDPKIEHYGCMVDMFGRAGMVERAMEFIHTMPMKPNPIIWRTLVAACRAHG---RLEL 422
Query: 421 GNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGG 480
G + R LL P N V+++N YA W++ S +RR M G+KK+ G S VEL G
Sbjct: 423 GESITRNLLNEYPAHEANYVMLSNVYALTQRWKEKSEIRREMSKRGIKKVPGCSLVELDG 482
Query: 481 SIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+H F +G +S + IY ++E + +K
Sbjct: 483 EVHEFIAGDESHPQWKEIYMMVEEMARELK 512
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 156/469 (33%), Positives = 245/469 (52%), Gaps = 6/469 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIH+ +G ++D + L+ S L AR IL + + W ++I GY
Sbjct: 367 QIHSLSIKNGFESDMYVSGVLIDM--YSKYGCLDKARKIL-EMLEKRDVVSWTSMIAGYV 423
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
D EA+ F +M+ G+ P ACA I + +G+Q+ A V SG +D+
Sbjct: 424 QHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADIS 483
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N LV Y C R +A +F ++ + ++WN +I+ ++ +A+ F+KM G
Sbjct: 484 IWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAG 543
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+ + T + +SA L ++ GK VH + ++ G ++ ALI +Y KCG++ A+
Sbjct: 544 AKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAK 603
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
++FS M N +W+ +I +QHG EAL+LF MK + PN VTF+GVL AC+H G
Sbjct: 604 MIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVG 663
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+VE+G YF M +V+G+ P+ HY + DIL RAG L A F+ MP N ++ R L
Sbjct: 664 LVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTL 723
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
LSA +H +G + LLELEP S + V+++N YA G W VR+ MK+
Sbjct: 724 LSACKVHK---NIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDR 780
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
G++K G SW+E+ ++H F+ G IY+ L LN + + +
Sbjct: 781 GIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGY 829
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 179/381 (46%), Gaps = 9/381 (2%)
Query: 32 LSFLKLCCSKKHLYQ----IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
LS + C+K L+ IHAQ+ ++ + L+ S L A + C+
Sbjct: 147 LSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKL--AERVFCD 204
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+ + +N LI G+A A+ +F +M+ G++P T +L ACA + L +
Sbjct: 205 MLFCD-RVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQK 263
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G Q+ + + K+G+ D T +L+ Y C A +F+ +VV WN+++ +
Sbjct: 264 GKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQ 323
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
L ++ F +M+ G P++ T +L CT G + LG+ +H I+ G + +
Sbjct: 324 ISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYV 383
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
LIDMY+K G + AR + +E+ +V +W++MI G QH + EEAL F M++ +
Sbjct: 384 SGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGV 443
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
P+ + AC + G + H +V G ++T+ ++ AR G +EA+
Sbjct: 444 WPDNIGLASAASACAGIKAMRQGLQ-IHARVYVSGYAADISIWNTLVNLYARCGRSEEAF 502
Query: 388 TFIMNMPFQPNPIVLRALLSA 408
+ + + + I L+S
Sbjct: 503 SLFREIEHK-DEITWNGLISG 522
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 171/370 (46%), Gaps = 9/370 (2%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+IHA V GL D I L+ L + L + + ++ + W ++ GYA
Sbjct: 64 EIHATSVVRGLGADRLIGNLLI---DLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYA 120
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
S +EA ++ M + PT + VL AC + +G + A V K S+ +
Sbjct: 121 QSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETF 180
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDM--CERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
N L+ Y + A +VF DM C+R V++N +I+ + A+ F +M+
Sbjct: 181 VGNALIALYLGFGSFKLAERVFCDMLFCDR--VTFNTLISGHAQCGHGECALQIFDEMQL 238
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G PD T+ +L+AC +G+L GK +H L++ G + +L+D+Y KCG +
Sbjct: 239 SGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIET 298
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A +F+ + NV W+ M++ Q ++ E+F M+ + I PN T+ +L C
Sbjct: 299 AHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTC 358
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
G +E G + H + +G + + D+ ++ G L +A I+ M + + +
Sbjct: 359 TGQIELGEQ-IHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARK-ILEMLEKRDVVSWT 416
Query: 404 ALLSASSIHD 413
++++ HD
Sbjct: 417 SMIAGYVQHD 426
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 170/381 (44%), Gaps = 24/381 (6%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN ++ Y ++ +F M+ GI P +FTYP +L+ C + G Q+ +
Sbjct: 312 VLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSL 371
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K+G +SD+Y + L+ Y A K+ + + +R VVSW +I V++ + EA
Sbjct: 372 SIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEA 431
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M+D G PD + SAC + + G +H ++ G + + L+++
Sbjct: 432 LATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNL 491
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YA+CG A LF +E + TW+ +I G Q ++AL +F M + N TF
Sbjct: 492 YARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTF 551
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHG--IKPMRIHYHTMADIL----ARAGHLKEAYT 388
+ + A + ++ G + VHG +K +A+ L + G +++A
Sbjct: 552 ISAISALANLADIKQG-------KQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKM 604
Query: 389 FIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ----NLVIVAN 444
M LR +S ++I + Q G G E +++ G + + V
Sbjct: 605 IFSEMS-------LRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLA 657
Query: 445 KYAEVGMWEKVSNVRRFMKNV 465
+ VG+ E+ + + M NV
Sbjct: 658 ACSHVGLVEEGLSYFKSMSNV 678
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 121/260 (46%), Gaps = 2/260 (0%)
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
+++ A GL +D N L+ Y A +VF ++ R VSW +++ ++
Sbjct: 63 LEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQS 122
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
EA + +M P + VLSACT+ + G+ +H Q+ ++ +G
Sbjct: 123 GLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVG 182
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
ALI +Y G+ A +F M + T++ +I G AQ G+ E AL++F M+ S +
Sbjct: 183 NALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLR 242
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
P+ VT +L AC G ++ G + H G+ I ++ D+ + G ++ A+
Sbjct: 243 PDCVTVASLLAACASVGDLQKG-KQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHD 301
Query: 389 FIMNMPFQPNPIVLRALLSA 408
I N+ + N ++ +L A
Sbjct: 302 -IFNLGDRTNVVLWNLMLVA 320
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 155/419 (36%), Positives = 233/419 (55%), Gaps = 7/419 (1%)
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
DS+P I WN LI GY+ +AV +F M I + T VLK+ A + +
Sbjct: 343 DSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIK 402
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
Q+ KSG+ SD Y N+L+ YG C +A K+F++ +V++ +IT
Sbjct: 403 VCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYS 462
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+ EA+ +++M+D +PD +L+AC L GK +H+ I+ G + +
Sbjct: 463 QYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIF 522
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+L++MYAKCG++ A FS + + +WSAMI G AQHG+ +EAL LF+ M
Sbjct: 523 ASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDG 582
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+ PN++T + VLCACNHAG+V +G +YF +ME + GIKP + HY M D+L R+G L EA
Sbjct: 583 VPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEA 642
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKY 446
+ ++PF+ + V ALL A+ IH +G + + L +LEP S V++AN Y
Sbjct: 643 VELVNSIPFEADGFVWGALLGAARIHK---NIELGQKAAKMLFDLEPEKSGTHVLLANIY 699
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
A GMWE V+ VR+FMK+ +KK GMSW+E+ ++ F G S IY L+ L
Sbjct: 700 ASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQL 758
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 180/370 (48%), Gaps = 15/370 (4%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
++HA + G D + LV S + YAR L + ++ + W++L+ GY
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTL--YSKCRRFGYARK-LVDESSELDVVSWSSLLSGYV 58
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ EA+ VF +M G+K EFT+P VLKAC+ LN G +V +G +SD +
Sbjct: 59 QNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGF 118
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N LV Y C D+ ++F + ER+VVSWN + + V++ GEAVG F +M G
Sbjct: 119 VANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSG 178
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
P+E ++ ++L+AC L LG+ +H +++ G L+ AL+DMY+K G + A
Sbjct: 179 IMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAV 238
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F + +V +W+A+I G H + AL L MK S PN T L AC G
Sbjct: 239 AVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMG 298
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMA-----DILARAGHLKEAYTFIMNMPFQPNPI 400
E G R H + M H A D+ ++ + +A +MP + + I
Sbjct: 299 FKELG-RQLHS-----SLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMP-KKDII 351
Query: 401 VLRALLSASS 410
AL+S S
Sbjct: 352 AWNALISGYS 361
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 159/344 (46%), Gaps = 32/344 (9%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I G D A+ + +MK G +P FT LKACA + G Q+ ++
Sbjct: 250 VSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSS 309
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII---TVCVENLWL 211
+ K SD++ LV Y C DA + +D M ++ +++WN +I + C ++L
Sbjct: 310 LIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHL-- 367
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
+AV F KM + ++TT+ VL + L + + K +H I+ G + + +L
Sbjct: 368 -DAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSL 426
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
+D Y KC + A +F ++ +++MI +Q+G EEAL+L+ M+++ I P+
Sbjct: 427 LDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDP 486
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL---------ARAGH 382
+L AC + E G + HVH IK + M DI A+ G
Sbjct: 487 FICSSLLNACANLSAYEQGKQL-----HVHAIK-----FGFMCDIFASNSLVNMYAKCGS 536
Query: 383 LKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRR 426
+++A +P R ++S S++ Q G G E R
Sbjct: 537 IEDADRAFSEIPN-------RGIVSWSAMIGGYAQHGHGKEALR 573
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 163/348 (46%), Gaps = 30/348 (8%)
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
M++ A++ K G D N+LV Y CRR A K+ D+ E VVSW+ +++ V+N
Sbjct: 1 MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
++ EA+ F +M LG + +E T VL AC+ +L++G+ VH + G + +
Sbjct: 61 GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
L+ MYAKCG + +R LF + E NV +W+A+ Q EA+ LF M S I
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180
Query: 329 PNYVTFLGVLCACNHAGMVE-DGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
PN + +L AC AG+ E D R H + G+ + + + D+ ++AG ++ A
Sbjct: 181 PNEFSISIILNAC--AGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAV 238
Query: 388 TFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYA 447
++ P+ + A+++ +HD N++ LL+ E +GS
Sbjct: 239 AVFQDIA-HPDVVSWNAIIAGCVLHDC-------NDLALMLLD-EMKGSG---------- 279
Query: 448 EVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVEL 495
+ F + LK M + ELG +H D+ +L
Sbjct: 280 --------TRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDL 319
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 174/498 (34%), Positives = 261/498 (52%), Gaps = 13/498 (2%)
Query: 24 LLSKARQCLSFLKLCCSKKHLYQ---IHAQIQVSGL-QNDAQILKELVRFCTLSSSKNLT 79
L A +S L L L+Q IHA + L QN+ Q+L + K L
Sbjct: 198 LRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLV 257
Query: 80 YARSILCNYV--NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFT-YPFVL 136
YA + ND + W+ LI G+ DR EA +F DM G+ T L
Sbjct: 258 YACRVFHGMPVRND---VTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASAL 314
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
+ CA ++ L+ G Q+ A + KSG+ +D+ +N+L+ Y +A FD++ + +
Sbjct: 315 RVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTI 374
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
S+ +++ CV+N EA F KM+ EPD TM+ ++ AC+ L L GK H +
Sbjct: 375 SYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSV 434
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
I RG L + +LIDMYAKCG + +R +F +M +V +W+ MI G HG +EA
Sbjct: 435 IIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEAT 494
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
LF MKN +P+ VTF+ ++ AC+H+G+V +G +F M H +GI P HY M D+
Sbjct: 495 TLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDL 554
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGS 436
LAR G L EAY FI +MP + + V ALL A IH K D +G +V R + +L P G+
Sbjct: 555 LARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIH--KNID-LGKQVSRIIQKLGPEGT 611
Query: 437 QNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELA 496
N V+++N ++ G +++ + VR K G KK G SW+E+ GS+H F G S
Sbjct: 612 GNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSR 671
Query: 497 GIYQILETLNLHMKVLNF 514
IY L+ + + +K L +
Sbjct: 672 DIYHELDNIMVDIKKLGY 689
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 160/343 (46%), Gaps = 13/343 (3%)
Query: 76 KNLTYARSILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFT 131
++++ + L V D +P P +N LIR Y+W A+ ++ M R + P ++T
Sbjct: 43 QHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYT 102
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
+PFVLKAC+ + L G + A+ +GL +D++ + L+ Y C R A VF M
Sbjct: 103 FPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMP 162
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL-GFEPDETTMLVVLSACTELGNLSLGK 250
R VV+WN ++ + A+ + + M+D G P+ +T++ +L + G L G
Sbjct: 163 MRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGT 222
Query: 251 WVHLQLIERGTVLNCQ---LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA 307
+H + N + +GTAL+DMYAKC + A +F M N TWSA+I G
Sbjct: 223 SIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFV 282
Query: 308 QHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGY--RYFHEMEHVHGIKP 365
EA LF +M + +++ V A + D + H + GI
Sbjct: 283 LCDRMTEAFNLFKDMLVEGLC--FLSATSVASALRVCASLADLHMGTQLHALIAKSGIHA 340
Query: 366 MRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
+++ + A+AG + EA F + + + I ALLS
Sbjct: 341 DLTASNSLLSMYAKAGLINEATMFFDEIAVK-DTISYGALLSG 382
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 171/498 (34%), Positives = 247/498 (49%), Gaps = 38/498 (7%)
Query: 40 SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNN 99
S + +HA + G+ +A + LV T ++ A L + P+ WN
Sbjct: 58 SAAPVRAVHAHVVKFGMGRNAHVATSLV---TAYAAGGDGAAARALLSERERDTPVVWNA 114
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG-LNEGMQVQANVTKS 158
LI G+ R EA F+DM R G PT TY VL AC + +G + GMQV V S
Sbjct: 115 LISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGS 174
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM---------------------------- 190
G+ D+ N LV Y C A K+FD M
Sbjct: 175 GVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLF 234
Query: 191 ---CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLS 247
ER VSW +I V+ EA+ F +M+ DE TM+ V++AC +LG L
Sbjct: 235 GRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALE 294
Query: 248 LGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA 307
+G+WV + + +G ++ +G ALIDMY+KCG++ A +F M + +TW+A+ILGLA
Sbjct: 295 MGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLA 354
Query: 308 QHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
+GY EEA+E+F M S +P+ VTF+GVL AC HAG+V+ G +F M + I P
Sbjct: 355 VNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNV 414
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRR 427
+HY + D+ RAG + EA I MP PN + LL+A +H +G V R
Sbjct: 415 VHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHG---NSEIGELVTER 471
Query: 428 LLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYS 487
LL+++P S +++N YA+ WE V +R + G+KK G S +E+ G IH F +
Sbjct: 472 LLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGCSLIEMNGIIHEFVA 531
Query: 488 GYDSQVELAGIYQILETL 505
G S IY LE++
Sbjct: 532 GDQSHPMSKEIYCKLESI 549
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 139/314 (44%), Gaps = 33/314 (10%)
Query: 112 EAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLV 171
+AV + M RG P +T+P +LKA A S V A+V K G+ + + +LV
Sbjct: 26 DAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLV 85
Query: 172 RFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDET 231
Y + A + + + V WN +I+ GEA FV M G P
Sbjct: 86 TAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPV 145
Query: 232 TMLVVLSACTE-LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC------------ 278
T + VLSAC + G++ LG VH +++ G + + ++ AL+DMYA+C
Sbjct: 146 TYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDG 205
Query: 279 -------------------GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELF 319
G V AR LF RM E + +W+AMI G Q EALE+F
Sbjct: 206 MQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMF 265
Query: 320 SNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILAR 379
M+ S++S + T + V+ AC G +E G + GIK + + D+ ++
Sbjct: 266 REMQCSNVSADEFTMVSVITACAQLGALEMG-EWVRVYMSRQGIKMDAFVGNALIDMYSK 324
Query: 380 AGHLKEAYTFIMNM 393
G ++ A +M
Sbjct: 325 CGSIERALDVFKDM 338
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 125/278 (44%), Gaps = 9/278 (3%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW 97
C + +++ +QV + + +L L R + +++L + R + + + W
Sbjct: 193 CADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDL-FGR------MPERDTVSW 245
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
+I GY + R REA+ +F +M+ + EFT V+ ACA++ L G V+ +++
Sbjct: 246 TAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSR 305
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
G+ D + N L+ Y C A VF DM R +W II N + EA+
Sbjct: 306 QGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEM 365
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQLGTALIDMYA 276
F +M + PDE T + VL+ACT G + G+ L + E + N +ID++
Sbjct: 366 FHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFG 425
Query: 277 KCGAVGCARLLFSRMEEI-NVWTWSAMILGLAQHGYAE 313
+ G + A +M N W ++ HG +E
Sbjct: 426 RAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSE 463
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 106/252 (42%), Gaps = 9/252 (3%)
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
+AV + +M G PD T +L A + + + VH +++ G N + T+L+
Sbjct: 26 DAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLV 85
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
YA G AR L S E W+A+I G + EA F +M + +P V
Sbjct: 86 TAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPV 145
Query: 333 TFLGVLCACNHA-GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
T++ VL AC G V G + + + +R+ + + D+ A ++ A+
Sbjct: 146 TYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVE-NALVDMYAECADMESAWKLFD 204
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGM 451
M +R+++S +S+ + G +E R + R + + + + Y +
Sbjct: 205 GMQ-------VRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAAR 257
Query: 452 WEKVSNVRRFMK 463
+ + + R M+
Sbjct: 258 FREALEMFREMQ 269
>gi|296084064|emb|CBI24452.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 252/477 (52%), Gaps = 9/477 (1%)
Query: 34 FLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSV 93
L+ C K + IHAQI + G + + + +LV N+ AR + + + D
Sbjct: 13 LLQRCKGTKTIKSIHAQIIIGGFEENPFLGAKLVGKYAQCYESNIEDARKVF-DCLPDRD 71
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
WN +I+GYA EA+ ++ M+ G+ +T+PFVLKAC + +G +
Sbjct: 72 VFVWNTIIQGYANLGPFMEALNIYEYMRCSGVAANRYTFPFVLKACGAMKDGKKGQAIHG 131
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+V K GLD D++ N LV FY C + +VFD + E+ +V+WN +I+ N +
Sbjct: 132 HVVKHGLDLDLFVGNALVAFYAKCNEIGASRRVFDMISEKDIVTWNSMISGYAINGCADD 191
Query: 214 AVGYFVKM----KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
A+ F M D + PD T++ +L AC + + G W+H +I+ G L+ LG+
Sbjct: 192 ALVLFHNMLQVQGDTVYAPDSATLVAILPACAQAAAIQEGLWIHSYVIKSGIELDAALGS 251
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
LI MYA CG + AR +F R+++ N+ W+A+I HG+A+EAL++FS + +S + P
Sbjct: 252 GLIAMYANCGLLNSARDVFDRIDDKNIVVWNAIIRCYGMHGHADEALKMFSGLIDSGLHP 311
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
+ V FL +L A +HAGMV +G F +M +G++ HY ++ DIL RAG L EA F
Sbjct: 312 DGVIFLCLLSAFSHAGMVAEGMELFEKMGD-YGVEKSSEHYASVVDILGRAGFLHEAVEF 370
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
+ NMP QP V ALL A IH+ + E+ +L L+P + +I+ Y +
Sbjct: 371 VKNMPVQPGKDVYGALLGACRIHN---NIELAEEIAEKLFVLDPDNAGRYIILVKMYEDA 427
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
G WE + +R+ +K ++K G S +ELG +H F S I+ LE L+
Sbjct: 428 GKWENAARLRKALKEKNIRKPLGCSAIELGCVLHTFGVEDKSHPFKDQIFDTLERLD 484
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 153/413 (37%), Positives = 230/413 (55%), Gaps = 4/413 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I GYA S R EA+ F +MKR + P E T VL ACA+ L G V++
Sbjct: 230 VSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSW 289
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ GL S++ N L+ Y C A +F+ +CE+ ++SWNV+I EA
Sbjct: 290 IEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEA 349
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQLGTALID 273
+ F KM+ EP++ T + +L AC LG L LGKW+H + ++ L N L T+LID
Sbjct: 350 LALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLID 409
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MYAKCG + A+ +F+ M+ ++ +W+AMI GLA HG+A ALELF M++ P+ +T
Sbjct: 410 MYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDIT 469
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
F+GVL AC+HAG+VE G + F M + I P HY M D+L RAG EA + NM
Sbjct: 470 FVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNM 529
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
+P+ + +LL A +H +G + L ELEP V+++N YA G W+
Sbjct: 530 EMKPDGAIWGSLLGACRVHG---NVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWD 586
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
V+ +R + + G+KK+ G S +E+ +H F G + IY++L+ ++
Sbjct: 587 DVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEID 639
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 217/420 (51%), Gaps = 41/420 (9%)
Query: 12 IFPP-----KPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKEL 66
+ PP +P++ L + L+ L C S ++L QIH+QI +GL N L +L
Sbjct: 11 VMPPPTLHFQPTSDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKL 70
Query: 67 VRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIK 126
+ FC +S NL+YA +L + WN +IRG + S P A+ ++ M G++
Sbjct: 71 IEFCAISPFGNLSYAL-LLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVE 129
Query: 127 PTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYG----------- 175
P +T+PF+LK+CA++ EG Q+ +V K GL+SD + + +L+ Y
Sbjct: 130 PNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELV 189
Query: 176 ----SCRRK----------------RDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
S R DA ++F+++ R VSWN +I ++ EA+
Sbjct: 190 FSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEAL 249
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY 275
+F +MK P+E+TM+ VLSAC + G+L LG WV + + G N +L ALIDMY
Sbjct: 250 AFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMY 309
Query: 276 AKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFL 335
+KCG + AR LF + E ++ +W+ MI G + +EAL LF M+ S++ PN VTF+
Sbjct: 310 SKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFV 369
Query: 336 GVLCACNHAGMVEDGYRYFHEM--EHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
+L AC + G ++ G ++ H + G+ + + ++ D+ A+ G+++ A M
Sbjct: 370 SILPACAYLGALDLG-KWIHAYIDKKFLGLTNTSL-WTSLIDMYAKCGNIEAAKQVFAGM 427
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 173/498 (34%), Positives = 262/498 (52%), Gaps = 13/498 (2%)
Query: 24 LLSKARQCLSFLKLCCSKKHLYQ---IHAQIQVSGL-QNDAQILKELVRFCTLSSSKNLT 79
L A +S L L L+Q IHA + L QN+ Q+L + K L
Sbjct: 198 LRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLV 257
Query: 80 YARSILCNYV--NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGI-KPTEFTYPFVL 136
YA + ND + W+ LI G+ DR EA +F DM G+ + + L
Sbjct: 258 YACRVFHGMPVRND---VTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASAL 314
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
+ CA ++ L+ G Q+ A + KSG+ +D+ +N+L+ Y +A FD++ + +
Sbjct: 315 RVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTI 374
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
S+ +++ CV+N EA F KM+ EPD TM+ ++ AC+ L L GK H +
Sbjct: 375 SYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSV 434
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
I RG L + +LIDMYAKCG + +R +F +M +V +W+ MI G HG +EA
Sbjct: 435 IIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEAT 494
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
LF MKN +P+ VTF+ ++ AC+H+G+V +G +F M H +GI P HY M D+
Sbjct: 495 TLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDL 554
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGS 436
LAR G L EAY FI +MP + + V ALL A IH K D +G +V R + +L P G+
Sbjct: 555 LARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIH--KNID-LGKQVSRIIQKLGPEGT 611
Query: 437 QNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELA 496
N V+++N ++ G +++ + VR K G KK G SW+E+ GS+H F G S
Sbjct: 612 GNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSR 671
Query: 497 GIYQILETLNLHMKVLNF 514
IY L+ + + +K L +
Sbjct: 672 DIYHELDNIMVDIKKLGY 689
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 160/343 (46%), Gaps = 13/343 (3%)
Query: 76 KNLTYARSILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFT 131
++++ + L V D +P P +N LIR Y+W A+ ++ M R + P ++T
Sbjct: 43 QHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYT 102
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
+PFVLKAC+ + L G + A+ +GL +D++ + L+ Y C R A VF M
Sbjct: 103 FPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMP 162
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL-GFEPDETTMLVVLSACTELGNLSLGK 250
R VV+WN ++ + A+ + + M+D G P+ +T++ +L + G L G
Sbjct: 163 MRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGT 222
Query: 251 WVHLQLIERGTVLNCQ---LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA 307
+H + N + +GTAL+DMYAKC + A +F M N TWSA+I G
Sbjct: 223 SIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFV 282
Query: 308 QHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGY--RYFHEMEHVHGIKP 365
EA LF +M + +++ V A + D + H + GI
Sbjct: 283 LCDRMTEAFNLFKDMLVEGLC--FLSATSVASALRVCASLADLHMGTQLHALIAKSGIHA 340
Query: 366 MRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
+++ + A+AG + EA F + + + I ALLS
Sbjct: 341 DLTASNSLLSMYAKAGLINEATMFFDEIAVK-DTISYGALLSG 382
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 146/421 (34%), Positives = 228/421 (54%), Gaps = 3/421 (0%)
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ WN +I + + E + +F M R ++P +FTY VLKAC+ LN GM++
Sbjct: 444 AVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHN 503
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+ KSGL D + L+ Y C +A K+ D + ++++VSWN II +
Sbjct: 504 RIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSED 563
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
A +F +M + +PD T +VL AC L ++ LGK +H Q+I+ + + + L+D
Sbjct: 564 AHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVD 623
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MY+KCG + + L+F + + TW+AMI G AQHG EEAL F M+ ++ PN+ T
Sbjct: 624 MYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHAT 683
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
F+ +L AC H G ++ G YF+ M +G++P HY M DI+ R+G + EA I M
Sbjct: 684 FVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEM 743
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
PF+ + ++ R LLS IH + + +L+LEP S ++++N YA+ GMW
Sbjct: 744 PFEADAVIWRTLLSICKIHG---NIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWG 800
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLN 513
KVS +R+ M+ LKK G SW+E+ +H F G + IY+IL L MK +
Sbjct: 801 KVSEMRKMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEMKWIG 860
Query: 514 F 514
+
Sbjct: 861 Y 861
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 153/304 (50%), Gaps = 13/304 (4%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
+N +I G +++ EA+ F + + G+ E + ACA I G +G Q+ +
Sbjct: 346 YNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSV 405
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
KS L S++ N+++ YG C +AC +FD+M R VSWN +I +N E +
Sbjct: 406 KSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLN 465
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F M L EPD+ T VL AC+ L+ G +H ++I+ G L+ +G ALIDMY
Sbjct: 466 LFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYC 525
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KCG + A+ + R+E+ + +W+A+I G ++E+A F M S+ P+ T+
Sbjct: 526 KCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAI 585
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHG-IKPMRIH-----YHTMADILARAGHLKEAYTFI 390
VL AC + V G + +HG I + +H T+ D+ ++ G+++++
Sbjct: 586 VLDACANLASVGLG-------KQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVF 638
Query: 391 MNMP 394
P
Sbjct: 639 EKAP 642
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 148/293 (50%), Gaps = 2/293 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKR-RGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ WN+++ G+ + R+++ VF+DM R + + T+ VLKAC+ + G+QV
Sbjct: 141 VSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHG 200
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+ + G DV T + L+ Y C+R D+ K+F ++ ++ V W+ II CV+N
Sbjct: 201 LIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHIL 260
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
+ F +M+ +G ++ V +C L L +G +H ++ + +GTA +D
Sbjct: 261 GLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLD 320
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MYAKCG++ A+ +F+ + + ++ ++A+I+G ++ EAL+ F + S + N ++
Sbjct: 321 MYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEIS 380
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
G AC DG R H + ++ +++ D+ + L EA
Sbjct: 381 LSGAFSACASIKGDLDG-RQLHSLSVKSTLRSNICVANSILDMYGKCEALSEA 432
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 145/310 (46%), Gaps = 17/310 (5%)
Query: 51 IQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDS------VPIP----WNNL 100
IQV GL K++V L YA+ C ++DS +P+ W+ +
Sbjct: 196 IQVHGLIVRMGFYKDVVTGSALLD----MYAK---CKRLDDSLKIFSEIPVKNWVCWSAI 248
Query: 101 IRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGL 160
I G +D + +F +M++ GI ++ Y V ++CA +S L G Q+ A+ K
Sbjct: 249 IAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDF 308
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK 220
SD+ + Y C DA ++F+ + + S+ +N II CV N EA+ +F
Sbjct: 309 GSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQL 368
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
+ G +E ++ SAC + G+ +H ++ N + +++DMY KC A
Sbjct: 369 LLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEA 428
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
+ A +F ME + +W+A+I Q+G EE L LF++M + P+ T+ VL A
Sbjct: 429 LSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKA 488
Query: 341 CNHAGMVEDG 350
C+ + G
Sbjct: 489 CSSQQALNSG 498
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 130/291 (44%), Gaps = 14/291 (4%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILC 86
S LK C S++ L +IH +I SGL D+ + L+ C + + R
Sbjct: 484 SVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDR---- 539
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
+ + WN +I G+ +A F +M + +KP FTY VL ACA ++ +
Sbjct: 540 --IEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVG 597
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G Q+ + K L SDVY + LV Y C +D+ VF+ + V+WN +I
Sbjct: 598 LGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYA 657
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG-KWVHLQLIERGTVLNC 265
++ EA+GYF +M+ P+ T + +L AC +G + G + + L E G
Sbjct: 658 QHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQI 717
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEA 315
+ + +ID+ + G + A L M E + W ++ HG E A
Sbjct: 718 EHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNIEIA 768
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 140/308 (45%), Gaps = 48/308 (15%)
Query: 127 PTEF-TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACK 185
PT+ T+ +++ C++ + L G Q A + SG DVY +N L++ Y C A K
Sbjct: 40 PTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYK 99
Query: 186 VFDDMCERSV-------------------------------VSWNVIITVCVENLWLGEA 214
VF+ M +R V VSWN +++ ++N ++
Sbjct: 100 VFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKS 159
Query: 215 VGYFVKM---KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
+ F+ M +++GF D+TT VVL AC+ L + LG VH ++ G + G+AL
Sbjct: 160 IDVFLDMGRSEEVGF--DQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSAL 217
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
+DMYAKC + + +FS + N WSA+I G Q+ LELF M+ I +
Sbjct: 218 LDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQ 277
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIK-----PMRIHYHTMADILARAGHLKEA 386
+ V +C ++ G + H H +K + + T+ D+ A+ G L +A
Sbjct: 278 SIYASVFRSCAGLSALKVGTQL-----HAHALKCDFGSDITVGTATL-DMYAKCGSLADA 331
Query: 387 YTFIMNMP 394
++P
Sbjct: 332 QRIFNSLP 339
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 163/465 (35%), Positives = 245/465 (52%), Gaps = 6/465 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIH +I SGLQ D + L+ S L AR++ + + V + W +I G A
Sbjct: 553 QIHGRITESGLQLDVNLGNALINMYIRCGS--LQDARNVFHSLQHRDV-MSWTAMIGGCA 609
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+A+ +F M+ G +P + T+ +LK C + L+EG +V A + SG + D
Sbjct: 610 DQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTG 669
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N L+ Y DA +VFD M R +VSWN II +N AV + +M++
Sbjct: 670 VGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQD 729
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
P++ + + +L+AC+ L GK VH ++++R + ++G ALI MYAKCG+ G A+
Sbjct: 730 VVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQ 789
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F + E NV TW+AMI AQHG A +AL F+ M+ I P+ TF +L ACNHAG
Sbjct: 790 EVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAG 849
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+V +GY+ F ME +G+ P HY + +L RA +EA T I MPF P+ V L
Sbjct: 850 LVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETL 909
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
L A IH + L+L R ++++N YA G W+ V+ +RR M+
Sbjct: 910 LGACRIHG---NIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGR 966
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
G++K G SW+E+ IH F + S E A IY L+ L++ M+
Sbjct: 967 GIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEME 1011
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 223/484 (46%), Gaps = 41/484 (8%)
Query: 32 LSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
LS L C + K L IH+ I G +D QI L+ + +L AR +
Sbjct: 334 LSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISM--YARCGDLPKARELFYTM 391
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
+ I WN +I GYA + EA+ ++ M+ G+KP T+ +L ACA S +G
Sbjct: 392 PKRDL-ISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADG 450
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
+ ++ +SG+ S+ + N L+ Y C +A VF+ R V+SWN +I ++
Sbjct: 451 KMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQH 510
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
A F +M++ EPD T VLS C L LGK +H ++ E G L+ LG
Sbjct: 511 GSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLG 570
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
ALI+MY +CG++ AR +F ++ +V +W+AMI G A G +A+ELF M+N
Sbjct: 571 NALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFR 630
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYF-------HEMEHVHGIKPMRIHYHTMADILARAG 381
P TF +L C + +++G + +E++ G + + +++G
Sbjct: 631 PVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVG--------NALISAYSKSG 682
Query: 382 HLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVI 441
+ +A MP R ++S + I Q+G+G +++ + +
Sbjct: 683 SMTDAREVFDKMPS-------RDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQD-----V 730
Query: 442 VANKYAEVGMWEKVSNV------RRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVEL 495
V NK++ V + S+ +R + +K++G V +G ++ Y+ SQ E
Sbjct: 731 VPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGD--VRVGAALISMYAKCGSQGEA 788
Query: 496 AGIY 499
++
Sbjct: 789 QEVF 792
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 153/303 (50%), Gaps = 7/303 (2%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I WN+LI YA ++A +F +M+ G P + TY +L AC + L G ++ +
Sbjct: 94 ISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQ 153
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ K+G D N+L+ YG C A +VF + R VVS+N ++ + + ++ E
Sbjct: 154 IIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKEC 213
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+G F +M G PD+ T + +L A T L GK +H +E G + ++GTAL+ M
Sbjct: 214 LGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTM 273
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
+CG V A+ F + +V ++A+I LAQHG+ EA E + M++ ++ N T+
Sbjct: 274 CVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTY 333
Query: 335 LGVLCACNHAGMVEDG---YRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
L +L AC+ + +E G + + E H ++ + + + AR G L +A
Sbjct: 334 LSILNACSTSKALEAGKLIHSHISEDGHSSDVQIG----NALISMYARCGDLPKARELFY 389
Query: 392 NMP 394
MP
Sbjct: 390 TMP 392
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 171/358 (47%), Gaps = 7/358 (1%)
Query: 32 LSFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
+S L C S L +IH+QI +G Q D ++ L+ +L AR +
Sbjct: 132 ISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSM--YGKCGDLPRARQVFAGI 189
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
V + +N ++ YA +E + +F M GI P + TY +L A S L+EG
Sbjct: 190 SPRDV-VSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEG 248
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
++ + GL+SD+ LV C A + F +R VV +N +I ++
Sbjct: 249 KRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQH 308
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
EA + +M+ G + TT L +L+AC+ L GK +H + E G + Q+G
Sbjct: 309 GHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIG 368
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
ALI MYA+CG + AR LF M + ++ +W+A+I G A+ EA+ L+ M++ +
Sbjct: 369 NALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVK 428
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
P VTFL +L AC ++ DG + HE GIK + + ++ R G L EA
Sbjct: 429 PGRVTFLHLLSACANSSAYADG-KMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEA 485
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 147/305 (48%), Gaps = 3/305 (0%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+IH GL +D ++ LV C ++ A+ + V + +N LI A
Sbjct: 250 RIHKLTVEEGLNSDIRVGTALVTMCVRCG--DVDSAKQAFKGTADRDVVV-YNALIAALA 306
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
EA + M+ G+ TY +L AC+ L G + +++++ G SDV
Sbjct: 307 QHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQ 366
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N L+ Y C A ++F M +R ++SWN II GEA+ + +M+ G
Sbjct: 367 IGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEG 426
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+P T L +LSAC + GK +H ++ G N L AL++MY +CG++ A+
Sbjct: 427 VKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQ 486
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F + +V +W++MI G AQHG E A +LF M+N + P+ +TF VL C +
Sbjct: 487 NVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPE 546
Query: 346 MVEDG 350
+E G
Sbjct: 547 ALELG 551
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 128/230 (55%), Gaps = 3/230 (1%)
Query: 126 KPTEF---TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRD 182
+PTE TY +L+ C L E ++ A + ++ + D++ +N L+ Y CR D
Sbjct: 21 RPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLD 80
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
A +VF +M R V+SWN +I+ + + +A F +M++ GF P++ T + +L+AC
Sbjct: 81 AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYS 140
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
L GK +H Q+I+ G + ++ +L+ MY KCG + AR +F+ + +V +++ M
Sbjct: 141 PAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTM 200
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR 352
+ AQ Y +E L LF M + ISP+ VT++ +L A M+++G R
Sbjct: 201 LGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKR 250
>gi|15225375|ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g20540
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis thaliana]
gi|67633530|gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251931|gb|AEC07025.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 168/509 (33%), Positives = 267/509 (52%), Gaps = 38/509 (7%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+ FL+ S+ +I+A I + GL + ++ ++V FC +++ YA + N
Sbjct: 14 IPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFC--DKIEDMDYATRLFNQVSNP 71
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIK-PTEFTYPFVLKACAEISGLNEGMQ 150
+V + +N++IR Y + + + ++ + R+ + P FT+PF+ K+CA + G Q
Sbjct: 72 NVFL-YNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQ 130
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT------- 203
V ++ K G V T N L+ Y DA KVFD+M ER V+SWN +++
Sbjct: 131 VHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQ 190
Query: 204 -------------------VCVENLWLG-----EAVGYFVKMKDLGFEPDETTMLVVLSA 239
+ + + G EA+ +F +M+ G EPDE +++ VL +
Sbjct: 191 MKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPS 250
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C +LG+L LGKW+HL RG + + ALI+MY+KCG + A LF +ME +V +W
Sbjct: 251 CAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISW 310
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
S MI G A HG A A+E F+ M+ + + PN +TFLG+L AC+H GM ++G RYF M
Sbjct: 311 STMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQ 370
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
+ I+P HY + D+LARAG L+ A MP +P+ + +LLS+
Sbjct: 371 DYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCR---TPGNLD 427
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
V L+ELEP N V++AN YA++G WE VS +R+ ++N +KK G S +E+
Sbjct: 428 VALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVN 487
Query: 480 GSIHRFYSGYDSQVELAGIYQILETLNLH 508
+ F SG +S+ I +L+ H
Sbjct: 488 NIVQEFVSGDNSKPFWTEISIVLQLFTSH 516
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/413 (37%), Positives = 237/413 (57%), Gaps = 8/413 (1%)
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N L+R YA D R A VF +R + ++ +++ ++ EG+ + +
Sbjct: 179 NTLMRMYAVCDVIRSARKVFDTSPQRDL----VSWTTMIQGYVKMGFAREGVGLYI-IRN 233
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
S ++ DV+ N LV Y C A KVF +M ++VVSWN +I+ + E++
Sbjct: 234 SNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYM 293
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
F KM+ LG +PD+ T++ VL++C LG L LGKWVH L + +G AL+DMYAK
Sbjct: 294 FRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAK 353
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CG++ A +F M +V++++AMI+GLA HG +AL+LFS M I P+ VTF+GV
Sbjct: 354 CGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGV 413
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
L AC+H G+VE+G +YF +M ++ ++P HY M D+L RAG + EA FI NMP +P
Sbjct: 414 LTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEP 473
Query: 398 NPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSN 457
+ VL ALL A IH K + +G V +++ ++EPR V+++N Y+ W
Sbjct: 474 DAFVLGALLGACKIH-GKVE--LGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALK 530
Query: 458 VRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+R+ MK L+K G S +EL G IH F G S ++ IY++L+ + H+K
Sbjct: 531 LRKTMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEIMSHLK 583
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 121/358 (33%), Positives = 175/358 (48%), Gaps = 41/358 (11%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQ--ILKELVRFCTLSSSKNLTYARSILCNYV 89
LS L+ C S K L QIHA I + DAQ I L C S + YA S+L
Sbjct: 41 LSTLQTCKSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLR 100
Query: 90 NDSVPIPWNNLIRGYAWSDRPR-EAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
++P+ +N +IRG A S+ E + V+ M +GI P +T PFVLKACAE + EG
Sbjct: 101 TPNLPL-YNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREG 159
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
+V K GL SDVY +N L+R Y C R A KVFD +R +VSW +I V+
Sbjct: 160 EEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKM 219
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+ E VG ++ N++L +V G
Sbjct: 220 GFAREGVGLYI---------------------IRNSNVNLDVFV---------------G 243
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
AL+DMY KCG AR +F M NV +W++MI GLAQ G +E+L +F M+ +
Sbjct: 244 NALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVK 303
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
P+ VT + VL +C + G++E G ++ H + I+ + + D+ A+ G + +A
Sbjct: 304 PDDVTLVAVLNSCANLGVLELG-KWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQA 360
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 132/293 (45%), Gaps = 37/293 (12%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN++I G A + +E++++F M+R G+KP + T VL +CA + L G V A
Sbjct: 272 VSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAY 331
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ ++ + +D + N LV Y C AC VF M + V S+ +I + G+A
Sbjct: 332 LDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKA 391
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M +G EPDE T + VL+AC+ H+ L+E G + T + ++
Sbjct: 392 LDLFSEMPKMGIEPDEVTFVGVLTACS-----------HVGLVEEGRKYFEDMST-IYNL 439
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
+ GC M+ L + G EA E NM I P+
Sbjct: 440 RPQLEHYGC------------------MVDLLGRAGLINEAEEFIRNM---PIEPDAFVL 478
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRI-HYHTMADILARAGHLKEA 386
+L AC G VE G M+ + I+P + Y M++I + A ++A
Sbjct: 479 GALLGACKIHGKVELGESV---MKKIEKIEPRKDGAYVLMSNIYSSANRWRDA 528
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 134/298 (44%), Gaps = 33/298 (11%)
Query: 127 PTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRK-----R 181
P + ++ L+ C I GL Q+ A++ K+ D + R C + R
Sbjct: 35 PHKLSFLSTLQTCKSIKGLK---QIHASIIKTMPSPDAQLTIS-TRLSALCAQSLPIDPR 90
Query: 182 DACKVFDDMCERSVVSWNVIIT-VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
A + + ++ +N II + N E + + +M G PD T+ VL AC
Sbjct: 91 YALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKAC 150
Query: 241 TELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
E + G+ VH Q I+ G + + L+ MYA C + AR +F + ++ +W+
Sbjct: 151 AESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWT 210
Query: 301 AMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG-----VLCACNHAGMVEDGYRYFH 355
MI G + G+A E + L+ ++NS++ N F+G + C A + F
Sbjct: 211 TMIQGYVKMGFAREGVGLYI-IRNSNV--NLDVFVGNALVDMYLKCGDANFAR---KVFQ 264
Query: 356 EMEHVHGIKPMR--IHYHTMADILARAGHLKEA-YTF--IMNMPFQPNPIVLRALLSA 408
EM P++ + +++M LA+ G KE+ Y F + + +P+ + L A+L++
Sbjct: 265 EM-------PVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNS 315
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 186/550 (33%), Positives = 275/550 (50%), Gaps = 76/550 (13%)
Query: 6 VPTTNHIF-----PPK--PSNCNSD-LLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQ 57
+P++ HI P K P N N++ + LS L+ C S L QI +Q+ ++GL
Sbjct: 20 LPSSRHIHTRALSPHKENPINWNTNHSFVLSNPFLSLLEKCKSISQLKQIQSQMVLTGLI 79
Query: 58 NDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVF 117
D L+ FC +S ++L Y +IL N N + WN IRG+ S+ PREAV ++
Sbjct: 80 EDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNT-FSWNVAIRGFLDSENPREAVVLY 138
Query: 118 ID-MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS-------------- 162
++ G KP +TYP + KACA +S + G ++ +V G DS
Sbjct: 139 KRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVS 198
Query: 163 -----------------DVYTNNNLVRFY----GSCRRKRD------------------- 182
D+ + N+++ Y S R+ D
Sbjct: 199 CGDLDGARKMFDKSCVRDLVSWNSMINGYCGNLESARKLFDSMTNKTMVSWTTMVVGYAQ 258
Query: 183 ------ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVV 236
A K+FD+M ++ VV WN +I V EA+ F +M+ + PDE TM+
Sbjct: 259 SGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSC 318
Query: 237 LSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINV 296
LSAC++LG L +G W+H + + LN LGTALIDMYAKCG + A +F + N
Sbjct: 319 LSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNS 378
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
TW+A+I GLA HG A A+ FS M ++S+ P+ VTFLG+L AC H G+VE+G +YF +
Sbjct: 379 LTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQ 438
Query: 357 MEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKY 416
M + P HY M D+L RAG L+EA I +MP + + +V AL A IH
Sbjct: 439 MSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVL 498
Query: 417 QDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWV 476
+G +LL+++P S V++AN Y E MW++ R+ M+ G++K SW
Sbjct: 499 ---MGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEKTPD-SWS 554
Query: 477 ELGGSIHRFY 486
L S+ RF+
Sbjct: 555 LL--SVLRFF 562
>gi|147817753|emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
Length = 569
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 174/519 (33%), Positives = 267/519 (51%), Gaps = 47/519 (9%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW 97
C + K L QIH QI V+G +L +L+ F +S NL A + N S + W
Sbjct: 44 CDTIKKLKQIHTQIIVNGFSQKNFLLVKLLSFYI--TSGNLLNAHKVFERIENPSTTV-W 100
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N +IRG++ S+ P + V ++ M +P EFTY F++ CA L EG QV V
Sbjct: 101 NQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSXLLREGEQVHGRVVA 160
Query: 158 SGLDSDVYTNNNLVRFYG---------SCRRKRD-------------------------A 183
+G ++V+ +LV Y RR D A
Sbjct: 161 NGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGA 220
Query: 184 CKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
++FD+M ER+VVSW +I C + +A+ F +M+ G + D+ ++ LSAC EL
Sbjct: 221 RRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAEL 280
Query: 244 GNLSLGKWVHLQLIERGTVLN----CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
G+L LG W+H + ER N L +LI MYA CG + A +F M++ + +W
Sbjct: 281 GDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISW 340
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSIS---PNYVTFLGVLCACNHAGMVEDGYRYFHE 356
++MI G A+ G+AEEAL +F M+ P+ +TF+GVLCAC+HAG V+ G +F
Sbjct: 341 TSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFEC 400
Query: 357 MEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKY 416
M GI P HY M D+L+RAG L EA+ +MP +PN V ALL IH K
Sbjct: 401 MNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLXESMPMKPNDAVWGALLGGCRIH--KN 458
Query: 417 QDGVGNEVRRRLLELEP-RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSW 475
+ + ++ +LEL+P + + LV+++N YA W+ V+ VR+ M +G++K G SW
Sbjct: 459 AELASHVAQKLVLELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSW 518
Query: 476 VELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
V++ G +H F +G + + +Y++L + K+ +
Sbjct: 519 VQINGVVHDFVAGDWTHKHASSVYEMLSKITRQAKLEGY 557
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/439 (33%), Positives = 245/439 (55%), Gaps = 7/439 (1%)
Query: 73 SSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
S NL A + + D+ + W ++I Y +A+ +F +M+ +G++P +T
Sbjct: 342 SKCGNLNGATEVFVK-MGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTV 400
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
++ ACA S L++G V + V K+G+ S++ N L+ Y C +A VF +
Sbjct: 401 TSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPV 460
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
+ +VSWN +I +NL EA+ F+ M+ F+PD+ TM VL AC L L G+ +
Sbjct: 461 KDIVSWNTMIGGYSQNLLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALDKGREI 519
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H ++ RG + + AL+DMYAKCG + A+LLF + + ++ +W+ MI G HG+
Sbjct: 520 HGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFG 579
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
EA+ F+ M+ + I P+ +F +L AC+H+G++ +G+++F+ M + G++P HY
Sbjct: 580 NEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYAC 639
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSI-HDAKYQDGVGNEVRRRLLEL 431
+ D+LAR G+L +AY FI +MP +P+ + LLS I HD K + +V + EL
Sbjct: 640 VVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVK----LAEKVAEHIFEL 695
Query: 432 EPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDS 491
EP ++ V++AN YAE WE+V +R+ M+ G K+ G SW+E+GG + F +G
Sbjct: 696 EPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSK 755
Query: 492 QVELAGIYQILETLNLHMK 510
+ I +L L + M+
Sbjct: 756 HPQAKKIDVLLSKLTMQMQ 774
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 203/414 (49%), Gaps = 14/414 (3%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S L+LC KK L ++H+ I +G+ D + +LV + +L R I +
Sbjct: 99 SVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFM--YVNCGDLVQGRKIFDKIM 156
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
ND V + WN L+ YA RE+V +F M++ G+ +T+ VLK A + + E
Sbjct: 157 NDKVFL-WNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECK 215
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
+V V K G S+ N+L+ Y A +FD++ E VVSWN +I CV N
Sbjct: 216 RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNG 275
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+ G + F++M LG E D TT++ VL AC +GNLSLG+ +H ++
Sbjct: 276 FSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSN 335
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
L+DMY+KCG + A +F +M + + +W+++I + G +A+ LF M++ + P
Sbjct: 336 TLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRP 395
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
+ T ++ AC + ++ G R H +G+ + + ++ A+ G ++EA
Sbjct: 396 DIYTVTSIVHACACSSSLDKG-RDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLV 454
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
+P ++ ++S +++ Q+ + NE L+++ + + + +A
Sbjct: 455 FSKIP-------VKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQFKPDDITMA 501
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 189/411 (45%), Gaps = 37/411 (9%)
Query: 42 KHLYQIHAQIQVSGLQNDAQILKELV----RFCTLSSSKNLTYARSILCNYVNDSVPIPW 97
K ++H + G ++ ++ L+ +F + S+ NL + +++ + W
Sbjct: 212 KECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLF-------DELSEPDVVSW 264
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N++I G + + +FI M G++ T VL ACA I L+ G + K
Sbjct: 265 NSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVK 324
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
+ +V +N L+ Y C A +VF M + ++VSW II V +A+G
Sbjct: 325 ACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGL 384
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
F +M+ G PD T+ ++ AC +L G+ VH +I+ G N + ALI+MYAK
Sbjct: 385 FDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAK 444
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CG+V ARL+FS++ ++ +W+ MI G +Q+ EALELF +M+ P+ +T V
Sbjct: 445 CGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQK-QFKPDDITMACV 503
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH------TMADILARAGHLKEAYTFIM 391
L AC ++ G +HG R ++ + D+ A+ G L A +
Sbjct: 504 LPACAGLAALDKG-------REIHGHILRRGYFSDLHVACALVDMYAKCGLLVLA-QLLF 555
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEV-----RRRLLELEPRGSQ 437
+M + + I +++ +H G GNE R+ +EP S
Sbjct: 556 DMIPKKDLISWTVMIAGYGMH------GFGNEAISTFNEMRIAGIEPDESS 600
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 131/291 (45%), Gaps = 3/291 (1%)
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
+Y VL+ CAE L +G +V + + +G+ D LV Y +C K+FD +
Sbjct: 96 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKI 155
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
V WN++++ + E+V F KM+ LG + T VL LG + K
Sbjct: 156 MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECK 215
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
VH +++ G N + +LI Y K G V A LF + E +V +W++MI G +G
Sbjct: 216 RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNG 275
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
++ LE+F M + + T + VL AC + G + G R H +
Sbjct: 276 FSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLG-RALHGFGVKACFSEEVVFS 334
Query: 371 HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVG 421
+T+ D+ ++ G+L A + M IV + A+ + + Y D +G
Sbjct: 335 NTLLDMYSKCGNLNGATEVFVKMG--DTTIVSWTSIIAAYVREGLYSDAIG 383
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
K +E + VL C E +L GK VH +I G ++ LG L+ MY CG +
Sbjct: 86 KSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDL 145
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
R +F ++ V+ W+ ++ A+ G E++ LF M+ + N TF VL
Sbjct: 146 VQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCF 205
Query: 342 NHAGMVEDGYRYFHEMEHVHG 362
G V+ E + VHG
Sbjct: 206 AALGKVK-------ECKRVHG 219
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 170/480 (35%), Positives = 259/480 (53%), Gaps = 23/480 (4%)
Query: 34 FLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKEL----VRFCTLSSSKNLTYARSILC 86
+K C + + Q +H + +G + ++ L V+F L ++NL
Sbjct: 22 LIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLF------- 74
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
+ + D + W +I Y+ S+ +A+ I M R G++P +TY VL+AC GL
Sbjct: 75 DEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRAC---DGLL 131
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
Q+ ++ K GL+SDV+ + L+ Y + DA VF++M +V WN II
Sbjct: 132 NLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFA 191
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+N E + + +MK F D++T+ VL ACT L L LG+ VH+ +++ L
Sbjct: 192 QNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYDQDL--I 249
Query: 267 LGTALIDMYAKCGAVGCARLLFSRM-EEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
L AL+DMY KCG++ A LLF+RM E +V +WS MI GLAQ+G++ +AL+LF MK+
Sbjct: 250 LNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSK 309
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
PNY+T LGVL AC+HAG+V DG+ YF M+ GI P R HY + D+L RAG L E
Sbjct: 310 GPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDE 369
Query: 386 AYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANK 445
A I M +P+ + R LL A +H K D + + +L+L+P + ++++N
Sbjct: 370 AVKLIHEMNHEPDAVTWRILLGACRVH--KNVD-LAIYAAKEILKLDPADAGTYILLSNI 426
Query: 446 YAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
YA WE V+ VRR M+ G+KK G SW+E+ +H F G +S + I + L L
Sbjct: 427 YANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQL 486
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 131/283 (46%), Gaps = 10/283 (3%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M R + TY ++K C + + V +V +G + + N L+ Y
Sbjct: 7 MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
+A +FD+M +R+VVSW +I+ + +A+ + + M G P+ T VL A
Sbjct: 67 LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA 126
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C L NL + +H +++ G + + +ALID Y+K G A +F+ M ++ W
Sbjct: 127 CDGLLNL---RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVW 183
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+++I G AQ+ +E L L+ MK + + T VL AC ++E G + H
Sbjct: 184 NSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQV-----H 238
Query: 360 VHGIKPMR--IHYHTMADILARAGHLKEAYTFIMNMPFQPNPI 400
VH +K + I + + D+ + G L++A M + + I
Sbjct: 239 VHVLKYDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVI 281
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 129/278 (46%), Gaps = 16/278 (5%)
Query: 33 SFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDS 92
S L+ C +L Q+H I GL++D VR + + L L N N+
Sbjct: 122 SVLRACDGLLNLRQLHGSILKVGLESDV-----FVRSALIDTYSKLGEQHDAL-NVFNEM 175
Query: 93 VP---IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+ + WN++I G+A + E + ++ MKR + T VL+AC ++ L G
Sbjct: 176 ITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGR 235
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD-MCERSVVSWNVIITVCVEN 208
QV +V K D D+ NN L+ Y C DA +F M E+ V+SW+ +I +N
Sbjct: 236 QVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQN 293
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER--GTVLNCQ 266
+ +A+ F MK G +P+ T+L VL AC+ G ++ G W + Q ++ G +
Sbjct: 294 GFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDG-WYYFQSMKEHFGIDPGRE 352
Query: 267 LGTALIDMYAKCGAVGCARLLFSRM-EEINVWTWSAMI 303
+ID+ + G + A L M E + TW ++
Sbjct: 353 HYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILL 390
>gi|359491319|ref|XP_002281821.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400-like [Vitis vinifera]
Length = 482
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 160/440 (36%), Positives = 243/440 (55%), Gaps = 25/440 (5%)
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTE-FTYPFVLKACAEISGLNEGMQVQ 152
P N ++ Y S + + F + R+ + F+ F LKAC S L EG Q+
Sbjct: 34 PPKSNQTLKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMH 93
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
A V G + ++ +L+ Y + DA +FD++ ++++SW +I+ V+N
Sbjct: 94 ALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSKNLISWTSVISAYVDNQRPN 153
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
+A+ F +M+ +PD T+ V LSAC +LG L +G+W+H + RG + L +LI
Sbjct: 154 KALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLI 213
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK--------- 323
+MY+KCG +G AR LF ++ +V TW++MI+G A HG AEEAL+LF+ MK
Sbjct: 214 NMYSKCGEIGTARRLFDGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKN 273
Query: 324 -------NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
+S + PN VTF+GVL AC+HAG+VE+G ++F M+ + ++P H+ M D+
Sbjct: 274 KRNGEHESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDL 333
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGN-----EVRRRLLEL 431
L RAG L EAY FI+ MP +PN +V R LL A S+ +G N E RR+LLEL
Sbjct: 334 LCRAGLLTEAYEFILKMPVRPNAVVWRTLLGACSLQGDSNGNGNSNIKIYSEARRQLLEL 393
Query: 432 EPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDS 491
EP + VI++N YA GMW+K VR +K ++ G S +E+G I F + D
Sbjct: 394 EPSHVGDNVIMSNLYAAKGMWDKKMLVRNQIKQ---RRDPGCSSIEVGIDIKEFVAADDQ 450
Query: 492 QVELAGIYQILETLNLHMKV 511
+ IY+IL+ L M+
Sbjct: 451 HPCMPQIYEILDHLTRTMRA 470
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 106/239 (44%), Gaps = 30/239 (12%)
Query: 35 LKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LK C K L Q+HA + G + + L+ S++ N+ A ++ D
Sbjct: 77 LKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISM--YSATGNVADAHNMF-----D 129
Query: 92 SVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+P I W ++I Y + RP +A+ +F M+ ++P T L ACA++ L+
Sbjct: 130 EIPSKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDM 189
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G + A + GLD+D+ NN+L+ Y C A ++FD ++ V +W +I
Sbjct: 190 GEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQKKDVTTWTSMIVGHAL 249
Query: 208 NLWLGEAVGYFVKMKDLGFE----------------PDETTMLVVLSACTELGNLSLGK 250
+ EA+ F +MK+ P++ T + VL AC+ G + GK
Sbjct: 250 HGQAEEALQLFTEMKETNKRARKNKRNGEHESSLVLPNDVTFMGVLMACSHAGLVEEGK 308
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 164/485 (33%), Positives = 257/485 (52%), Gaps = 12/485 (2%)
Query: 24 LLSKARQCLSFLKLCCSKK---HL-YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLT 79
LL S L+ C S HL QIHA +G+ D+ + L+ S S +
Sbjct: 1003 LLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLID--VYSKSGKME 1060
Query: 80 YARSILCNYVNDSVPIP-WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKA 138
A + N D + WN ++ GY S +A+ ++I M+ G + + T KA
Sbjct: 1061 EAEFLFVN--QDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKA 1118
Query: 139 CAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSW 198
+ GL +G Q+QA V K G + D++ + ++ Y C A ++F+++ V+W
Sbjct: 1119 AGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAW 1178
Query: 199 NVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
+I+ CVEN A+ + M+ +PDE T ++ AC+ L L G+ +H ++
Sbjct: 1179 TTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVK 1238
Query: 259 RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALEL 318
+ + T+L+DMYAKCG + AR LF R + +W+AMI+GLAQHG AEEAL+
Sbjct: 1239 LNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQF 1298
Query: 319 FSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILA 378
F MK+ ++P+ VTF+GVL AC+H+G+V + Y F+ M+ ++GI+P HY + D L+
Sbjct: 1299 FEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALS 1358
Query: 379 RAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQN 438
RAG ++EA I +MPF+ + + R LL+A + + G V +LL LEP S
Sbjct: 1359 RAGRIREAEKVISSMPFEASASMYRTLLNACRV---QVDRETGKRVAEKLLALEPSDSAA 1415
Query: 439 LVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGI 498
V+++N YA WE V++ R M+ +KK G SWV+L +H F +G S E I
Sbjct: 1416 YVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVI 1475
Query: 499 YQILE 503
Y +E
Sbjct: 1476 YNKVE 1480
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 169/343 (49%), Gaps = 7/343 (2%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIH + SGL + L+ + S ++ AR++ +N+ + WN +I G A
Sbjct: 927 QIHGIVVRSGLDQVVSVGNCLINMYVKTGS--VSRARTVFWQ-MNEVDLVSWNTMISGCA 983
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG-LNEGMQVQANVTKSGLDSDV 164
S +V +F+D+ R G+ P +FT VL+AC+ + G + Q+ A K+G+ D
Sbjct: 984 LSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDS 1043
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL 224
+ + L+ Y + +A +F + + SWN ++ + + +A+ ++ M++
Sbjct: 1044 FVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQES 1103
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCA 284
G ++ T+ A L L GK + +++RG L+ + + ++DMY KCG + A
Sbjct: 1104 GERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESA 1163
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA 344
R +F+ + + W+ MI G ++G E AL + +M+ S + P+ TF ++ AC+
Sbjct: 1164 RRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLL 1223
Query: 345 GMVEDGYRYFHEMEHVH-GIKPMRIHYHTMADILARAGHLKEA 386
+E G + ++ P + ++ D+ A+ G++++A
Sbjct: 1224 TALEQGRQIHANTVKLNCAFDPFVM--TSLVDMYAKCGNIEDA 1264
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 161/367 (43%), Gaps = 28/367 (7%)
Query: 43 HLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIR 102
HL+++ + VS ++ L + + C LS+S + A L Y + + W+ +
Sbjct: 713 HLFRLLRRSFVSATRH---TLAPVFKMCLLSASPS---AAESLHGYAV-KIGLQWDVFVA 765
Query: 103 G-----YAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
G YA R REA +F M R + + ++KA + E + + + +
Sbjct: 766 GALVNIYAKFGRIREARVLFDGMGLRDV----VLWNVMMKAYVDTGLEYEALLLFSEFNR 821
Query: 158 SGLDSDVYTNNNLVRFYGSCRR---------KRDACKVF---DDMCERSVVSWNVIITVC 205
+GL D T L R S + K K+F DD V++WN ++
Sbjct: 822 TGLRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWF 881
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
++ EAV FV M + D T +V+LS L L LGK +H ++ G
Sbjct: 882 LQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVV 941
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
+G LI+MY K G+V AR +F +M E+++ +W+ MI G A G E ++ +F ++
Sbjct: 942 SVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRG 1001
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
+ P+ T VL AC+ G H G+ T+ D+ +++G ++E
Sbjct: 1002 GLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEE 1061
Query: 386 AYTFIMN 392
A +N
Sbjct: 1062 AEFLFVN 1068
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 144/371 (38%), Gaps = 54/371 (14%)
Query: 2 VRFPVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHL---YQIHAQIQVSGLQN 58
+R T N PP + L+ Q S L+ + L + HA+I SG
Sbjct: 606 LRAATSTANPFIPP------AHLIHSIPQWFSILRHAIAASDLPLGKRAHARILTSGHHP 659
Query: 59 DAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP------IPWNNLIRGYAWSDRPRE 112
D + L+ S +L+ AR + D+ P + WN ++ +A D+ R+
Sbjct: 660 DRFLTNNLI--TMYSKCGSLSSARKLF-----DTTPDTSRDLVTWNAILSAHA--DKARD 710
Query: 113 AVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVR 172
+F ++R + T T V K C + + + K GL DV+ LV
Sbjct: 711 GFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVN 770
Query: 173 FYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETT 232
Y R R+A +FD M R VV WNV++ V+ EA+ F + G PD+ T
Sbjct: 771 IYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVT 830
Query: 233 MLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME 292
+ + N+ +W QL GT L MY
Sbjct: 831 LCTLARVVKSKQNVL--EWQLKQLKAYGTKLF---------MYDDDDDGS---------- 869
Query: 293 EINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR 352
+V W+ + Q G EA++ F +M NS ++ + +TF+ +L +E G
Sbjct: 870 --DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELG-- 925
Query: 353 YFHEMEHVHGI 363
+ +HGI
Sbjct: 926 -----KQIHGI 931
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 164/456 (35%), Positives = 244/456 (53%), Gaps = 39/456 (8%)
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P + W+ +I Y S P E++ +F M + G KP + +L A A + L
Sbjct: 274 DEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQ 333
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
GM + +VTK G + DV+ +++L+ Y C +D +FD + E+++VSWN ++
Sbjct: 334 AGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYS 393
Query: 207 ENLWLGEA-------------------VGY------------FVKMKDLGFEPDETTMLV 235
N + EA G+ F +M LG P+++T
Sbjct: 394 LNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSS 453
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
+L AC +L GK +H ++++ G + +GTAL DMYAK G + ++ +F+RM + N
Sbjct: 454 LLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKN 513
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGMVEDGYRYF 354
+W+AMI GLA+ G AEE+L LF M K SSI+PN V FL VL AC+H+G+V+ G YF
Sbjct: 514 EVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYF 573
Query: 355 HEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDA 414
+ ME V+G+KP H+ + D+L+RAG L EA FI +MPFQP ALLS +
Sbjct: 574 NSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLSGCKTYK- 632
Query: 415 KYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMS 474
+ + V +L E+ + V+++N YA G W V VR+ MK GLKK G S
Sbjct: 633 --NEELAERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMKAKGLKKSGGCS 690
Query: 475 WVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
WVE+ +H FYS + + A IY+ILE L MK
Sbjct: 691 WVEIRDRVHSFYSEDGAHSQSAEIYEILELLGYEMK 726
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 161/371 (43%), Gaps = 81/371 (21%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W I GY + EA+ +FI + +KP + T+ V++ACA + GM V
Sbjct: 150 VSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGL 209
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRD---ACKVFDDMCERSVVSWNVIITVCVENLWL 211
+ K+G + D+ +N+L+ C R + A +VFD M E+ VVSW I+ + VE L
Sbjct: 210 IVKTGYEHDLAVSNSLITL---CLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDEL 266
Query: 212 GEA------------------------VGY-------FVKMKDLGFEPDETTMLVVLSAC 240
GEA GY F +M GF+P+ + +LSA
Sbjct: 267 GEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSAL 326
Query: 241 TELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
+ L G +H + + G + + ++LIDMY KCG R LF + E N+ +W+
Sbjct: 327 ASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWN 386
Query: 301 AMILGLAQHGYAEEALELFSNM---KNSSIS----------------------------P 329
AM+ G + +G+ EEA LF+ M N S S P
Sbjct: 387 AMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIP 446
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG-IKPMRIHYHT-----MADILARAGHL 383
N TF +LCAC ++ G +++HG I + I T + D+ A++G +
Sbjct: 447 NKSTFSSLLCACASTASLDKG-------KNLHGKIVKLGIQCDTYVGTALTDMYAKSGDI 499
Query: 384 KEAYTFIMNMP 394
+ + MP
Sbjct: 500 ESSKKVFNRMP 510
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 130/312 (41%), Gaps = 48/312 (15%)
Query: 151 VQANVTKSGLDS-----DVYTNNN------LVRFYGSCRRKRDACKVFDDMCERSVVSWN 199
+ ANV + LD D N L+ + R R++ F+ ++VVSW
Sbjct: 94 ISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNPFQNVVSWT 153
Query: 200 VIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER 259
I+ V+N + EA+ F+K+ + +P++ T V+ AC LG+ LG V +++
Sbjct: 154 AAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKT 213
Query: 260 GTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINV--WT------------------- 298
G + + +LI + + G + AR +F RMEE +V WT
Sbjct: 214 GYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIF 273
Query: 299 ----------WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVE 348
WSAMI Q GY EE+L LF M PN F +L A ++
Sbjct: 274 DEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQ 333
Query: 349 DGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
G + + G + ++ D+ + G K+ F+ + + N + A++
Sbjct: 334 AGMNIHGHVTKI-GFEKDVFVSSSLIDMYCKCGETKDG-RFLFDTILEKNMVSWNAMVGG 391
Query: 409 SSIH----DAKY 416
S++ +AKY
Sbjct: 392 YSLNGHMEEAKY 403
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 172/482 (35%), Positives = 248/482 (51%), Gaps = 9/482 (1%)
Query: 32 LSFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
LS L C + + L +HAQ +GL +D ++ L+R S + AR +
Sbjct: 267 LSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGS--IEGARRVFDKM 324
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
V + W +IRGYA + +A +F M+ GI+P TY ++ ACA + L+
Sbjct: 325 KVRDV-VSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLA 383
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
++ + V ++G +D+ + LV Y C +DA +VFD M R VVSW+ +I VEN
Sbjct: 384 REIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVEN 443
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
EA F MK EPD T + +L+AC LG L LG ++ Q I+ V + +G
Sbjct: 444 GCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVG 503
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
ALI+M K G++ AR +F M + +V TW+ MI G + HG A EAL+LF M
Sbjct: 504 NALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFR 563
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
PN VTF+GVL AC+ AG VE+G R+F + GI P Y M D+L RAG L EA
Sbjct: 564 PNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAEL 623
Query: 389 FIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAE 448
I MP +PN + LL+A I+ V R L EP V +++ YA
Sbjct: 624 LINRMPLKPNSSIWSTLLAACRIYG---NLDVAERAAERCLMSEPYDGAVYVQLSHMYAA 680
Query: 449 VGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLH 508
GMWE V+ VR+ M++ G++K +G +W+E+ G +H F S + IY L L
Sbjct: 681 AGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTA 740
Query: 509 MK 510
+K
Sbjct: 741 IK 742
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 186/384 (48%), Gaps = 8/384 (2%)
Query: 32 LSFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
L L C S L + HAQ+ G +D +I LV S + AR +
Sbjct: 166 LIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGS--MDGARQVFDGL 223
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
V +N +I GYA S +A +F M++ G KP ++ +L C+ L G
Sbjct: 224 YKRDVS-TFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWG 282
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
V A +GL DV L+R Y C A +VFD M R VVSW V+I EN
Sbjct: 283 KAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAEN 342
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+ +A G F M++ G +PD T + +++AC +LSL + +H Q++ G + +
Sbjct: 343 SNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVD 402
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
TAL+ MYAKCGA+ AR +F M +V +WSAMI ++G EEA E F MK +++
Sbjct: 403 TALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVE 462
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
P+ VT++ +L AC H G ++ G + + + + + + + ++ + G ++ A
Sbjct: 463 PDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVG-NALINMNVKHGSIERARY 521
Query: 389 FIMNMPFQPNPIVLRALLSASSIH 412
NM Q + + ++ S+H
Sbjct: 522 IFENM-VQRDVVTWNVMIGGYSLH 544
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 184/378 (48%), Gaps = 11/378 (2%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+ I SG Q + L L++ ++ N+ AR + N +V + WN +I GYA
Sbjct: 82 QVRDHIIQSGRQLNIYELNTLIKLHSICG--NMLEARQTFDSVENKTV-VTWNAIIAGYA 138
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+EA +F M ++P+ T+ VL AC+ +GL G + A V K G SD
Sbjct: 139 QLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFR 198
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
LV Y A +VFD + +R V ++NV+I ++ +A F +M+ G
Sbjct: 199 IGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEG 258
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
F+P+ + L +L C+ L+ GK VH Q + G V + ++ TALI MY CG++ AR
Sbjct: 259 FKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGAR 318
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F +M+ +V +W+ MI G A++ E+A LF+ M+ I P+ +T++ ++ AC +
Sbjct: 319 RVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSA 378
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+ R H G + + + A+ G +K+A + + R +
Sbjct: 379 DLSLA-REIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVF-------DAMSRRDV 430
Query: 406 LSASSIHDAKYQDGVGNE 423
+S S++ A ++G G E
Sbjct: 431 VSWSAMIGAYVENGCGEE 448
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 117/212 (55%)
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
TY + + C + G QV+ ++ +SG ++Y N L++ + C +A + FD +
Sbjct: 63 TYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSV 122
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
++VV+WN II + + EA F +M D EP T L+VL AC+ L LGK
Sbjct: 123 ENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGK 182
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
H Q+I+ G V + ++GTAL+ MY K G++ AR +F + + +V T++ MI G A+ G
Sbjct: 183 EFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSG 242
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
E+A +LF M+ PN ++FL +L C+
Sbjct: 243 DGEKAFQLFYRMQQEGFKPNRISFLSILDGCS 274
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 33/219 (15%)
Query: 229 DETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLF 288
D T + + C L + LGK V +I+ G LN LI +++ CG + AR F
Sbjct: 60 DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119
Query: 289 SRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVE 348
+E V TW+A+I G AQ G+ +EA LF M + ++ P+ +TFL VL AC+ ++
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLK 179
Query: 349 DGYRYFHEMEHVHGIKPMRI------------------------------HYHTMADILA 378
G + ++ V + RI ++ M A
Sbjct: 180 LGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYA 239
Query: 379 RAGHLKEAYTFIMNMP---FQPNPIVLRALLSASSIHDA 414
++G ++A+ M F+PN I ++L S +A
Sbjct: 240 KSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEA 278
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 178/542 (32%), Positives = 266/542 (49%), Gaps = 68/542 (12%)
Query: 36 KLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPI 95
K S HL Q+HA +G D + LV+ NL +A + YV +
Sbjct: 38 KSSTSLHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVF-EYVPNPNVF 96
Query: 96 PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANV 155
+N +I+G ++ P +A+ + M +P +FTYP + KAC EG+QV A+V
Sbjct: 97 VFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHV 156
Query: 156 TKSGLDSDVYTNNNLVRFYGS-------------------------------CRRKRDAC 184
K GL DV+ + ++ YGS C A
Sbjct: 157 IKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAK 216
Query: 185 KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG------------------- 225
++F M +++V SWNV+++ + + EA F +MK+
Sbjct: 217 ELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKE 276
Query: 226 ------------FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
P + + VL+AC LG L G+W+H + + LGTAL+D
Sbjct: 277 ALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVD 336
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MYAKCG + A +F +ME+ V+TW+AMI GL HG AE+A+ELF M+ PN +T
Sbjct: 337 MYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGIT 396
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
LGVL AC H+GMV++G R F+ ME V+GI+P HY + D+L RAG L EA + +M
Sbjct: 397 LLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSM 456
Query: 394 PFQPNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMW 452
P +P+ V ALL A H D + +G V + LLELEP+ S +++N YA G W
Sbjct: 457 PMEPSAAVWGALLGACRKHGDVE----LGERVGKILLELEPQNSGRYALLSNIYARAGRW 512
Query: 453 EKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVL 512
+ V+NVR+ MK G+K G+S ++ G +H F G S ++ IY +L+ + +K+
Sbjct: 513 DDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIKRLKME 572
Query: 513 NF 514
F
Sbjct: 573 GF 574
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 172/511 (33%), Positives = 264/511 (51%), Gaps = 45/511 (8%)
Query: 16 KPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSS 75
+PS +S L + LK S + QIHAQ+ GL + +L L+ +
Sbjct: 43 EPSGTSSFSLPSHSTFVQLLKKRPSLTQIKQIHAQVVTHGLAQNTSLLGPLIH--SYIGC 100
Query: 76 KNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPT---EFTY 132
+NL++AR + + + I WN +I+ Y+ + +E++++F M G +PT ++T+
Sbjct: 101 RNLSFARIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHG-RPTSADKYTF 159
Query: 133 PFVLKACAEISGLNE-GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
FV AC+ L G V V K G +SD++ N+LV Y R DA +VFD+M
Sbjct: 160 TFVFTACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMP 219
Query: 192 ERSV-------------------------------VSWNVIITVCVENLWLGEAVGYFVK 220
+R V VSW V++ V + + EA+ F
Sbjct: 220 QRDVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFND 279
Query: 221 MK-DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
M +P+E ++ +LSAC LG L GKW+H+ + + +L+ + TALIDMYAKCG
Sbjct: 280 MLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCG 339
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
+ CAR +F + + ++ TW++MI GL+ HG E L FS M P+ +T LGVL
Sbjct: 340 RIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLN 399
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
C+H+G+VE+G FH+M + GI P HY + D+L RAG L+ A+ I +MP +P+
Sbjct: 400 GCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDV 459
Query: 400 IVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ--NLVIVANKYAEVGMWEKVSN 457
+ RALLSA IH +G + + EL P GS V+++N YA +G WE V+
Sbjct: 460 VAWRALLSACRIHG---DVDLGERIINHIAELCP-GSHGGGYVLLSNLYASMGQWESVTK 515
Query: 458 VRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
VR+ M G + G SW+E+ G +H F +
Sbjct: 516 VRKAMSQRGSEGCPGCSWIEIDGVVHEFLAA 546
>gi|147799543|emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
Length = 613
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 172/473 (36%), Positives = 254/473 (53%), Gaps = 51/473 (10%)
Query: 42 KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
+ L Q+HAQ+ + D EL+RF +S ++L YAR I + + +N LI
Sbjct: 2 QDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNC-FSYNTLI 60
Query: 102 RGYAWSDRPREAVWVFIDMKRR-GIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGL 160
R + S+ P +A+ VFI+M ++P FT+P V KAC L EG QV K GL
Sbjct: 61 RALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGL 120
Query: 161 DSDVYTNNNLVRFYGSC-------------------------RRKRD------------- 182
DSD + +N+VR Y SC +R+ D
Sbjct: 121 DSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGY 180
Query: 183 --------ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTML 234
A +FD+M +RSVVSWNV+I ++ EAV F +M+ P+ T++
Sbjct: 181 VRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLV 240
Query: 235 VVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI 294
VL A + LG L LGKWVHL + ++ LG+ALIDMYAKCG++ A +F + +
Sbjct: 241 SVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKR 300
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYF 354
NV TWS +I GLA HG A++ L+ F +M+ + + P+ VT++G+L AC+HAG+V +G +F
Sbjct: 301 NVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFF 360
Query: 355 HEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDA 414
M V G++P HY M D+L RAG L+E+ I+NMP +P+ ++ +ALL A +H
Sbjct: 361 DHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHG- 419
Query: 415 KYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGL 467
+G V L+EL P S + V ++N YA +G WE V+ VR MK + +
Sbjct: 420 --NVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDV 470
>gi|125528144|gb|EAY76258.1| hypothetical protein OsI_04193 [Oryza sativa Indica Group]
Length = 565
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 162/435 (37%), Positives = 239/435 (54%), Gaps = 18/435 (4%)
Query: 80 YARSILCNYVNDSVPIP----WNNLIRGY---AWSDRPREAVWVFIDMKRRGIK-PTEFT 131
YAR++ D +P P +N+LIR A + V V+ M R G P FT
Sbjct: 76 YARNLF-----DQIPEPTAFCYNSLIRALSSAAGVAPAADTVLVYRRMLRAGSPLPNSFT 130
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
F LKAC+ + L EG Q+ + + GL+ Y L+ Y C A VFD M
Sbjct: 131 LAFALKACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGMV 190
Query: 192 -ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
++++ +W+ +I + EA+G F +M+ PDE TM+ V+SAC + G L LG+
Sbjct: 191 GDKNLAAWSAMIGGYSRVGMVNEALGLFREMQAADVNPDEVTMVSVISACAKAGALDLGR 250
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
WVH + +G ++ +L TALIDMYAKCG + A+ +F M E + WSAMI+GLA HG
Sbjct: 251 WVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAMAERDTKAWSAMIVGLAIHG 310
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
E AL+LFS M + PN VTF+GVL AC H+G+V +G RY+ M+ + GIKP +Y
Sbjct: 311 LVEVALKLFSRMLELKVRPNNVTFIGVLSACAHSGLVNEGRRYWSTMQEL-GIKPSMENY 369
Query: 371 HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLE 430
M D+ R+ L EAY+F+ M PN ++ R LL AS + + + ++LLE
Sbjct: 370 GCMVDLFCRSSLLDEAYSFVTGMAIPPNSVIWRTLLVASKNSN---RFDIVQSASKKLLE 426
Query: 431 LEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYD 490
LEP +N V+++N YA W++VS +R+ MK + + G S +E+ G +H+F D
Sbjct: 427 LEPCNPENYVLLSNLYASNSQWDRVSYMRKKMKENNVNVVAGCSSIEINGYLHKFVVSDD 486
Query: 491 SQVELAGIYQILETL 505
S E+ I +L +
Sbjct: 487 SHPEIKEIRLLLREI 501
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 99/212 (46%), Gaps = 4/212 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+H+Q GL+ + L+ + + + AR++ V D W+ +I GY+
Sbjct: 149 QLHSQAFRRGLEPSPYVQTGLLNL--YAKCEEVALARTVFDGMVGDKNLAAWSAMIGGYS 206
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
EA+ +F +M+ + P E T V+ ACA+ L+ G V A + + G+ D+
Sbjct: 207 RVGMVNEALGLFREMQAADVNPDEVTMVSVISACAKAGALDLGRWVHAFIDRKGITVDLE 266
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
+ L+ Y C A VFD M ER +W+ +I + + A+ F +M +L
Sbjct: 267 LSTALIDMYAKCGLIERAKGVFDAMAERDTKAWSAMIVGLAIHGLVEVALKLFSRMLELK 326
Query: 226 FEPDETTMLVVLSACTELGNLSLGK--WVHLQ 255
P+ T + VLSAC G ++ G+ W +Q
Sbjct: 327 VRPNNVTFIGVLSACAHSGLVNEGRRYWSTMQ 358
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/421 (36%), Positives = 231/421 (54%), Gaps = 5/421 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I + + + F +M R G+KP +FTY VLKACA + L G+ V
Sbjct: 418 VSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDK 477
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V KSGL SD + + +V Y C +A K+ D + + VVSWN I++ N EA
Sbjct: 478 VIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEA 537
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+F +M D+G +PD T VL C L + LGK +H Q+I++ + + + + L+DM
Sbjct: 538 QKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDM 597
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG + + L+F ++E+ + +W+AMI G A HG EAL +F M+ ++ PN+ TF
Sbjct: 598 YAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATF 657
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ VL AC+H G+ +DG RYFH M + ++P H+ M DIL R+ +EA FI +MP
Sbjct: 658 VAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMP 717
Query: 395 FQPNPIVLRALLSASSIHDAKYQD-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
FQ + ++ + LLS I QD + +L L+P S ++++N YAE G W
Sbjct: 718 FQADAVIWKTLLSICKIR----QDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWA 773
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLN 513
VS RR +K LKK G SW+E+ +H F G + +Y++L L MK+
Sbjct: 774 DVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSG 833
Query: 514 F 514
+
Sbjct: 834 Y 834
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 163/334 (48%), Gaps = 7/334 (2%)
Query: 91 DSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P P WN L+ GY +E+V +F++M RRG+ P T+ +LK+C+ + L+
Sbjct: 107 DGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELS 166
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G+QV A K+GL+ DV T + LV YG CR DA F M ER+ VSW I CV
Sbjct: 167 LGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCV 226
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+N + F++M+ LG + + +C + L+ G+ +H I+ +
Sbjct: 227 QNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRV 286
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+GTA++D+YAK ++ AR F + V T +AM++GL + G EA+ LF M SS
Sbjct: 287 VGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSS 346
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
I + V+ GV AC G + H + G + + D+ + L EA
Sbjct: 347 IRFDVVSLSGVFSACAETKGYFQG-QQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEA 405
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGV 420
Y M Q + + A+++A + Y D +
Sbjct: 406 YLIFQGMK-QKDSVSWNAIIAALE-QNGHYDDTI 437
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 165/341 (48%), Gaps = 4/341 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HA + +D + +V + + +LT AR N +V N ++ G
Sbjct: 271 QLHAHAIKNKFSSDRVVGTAIVD--VYAKANSLTDARRAFFGLPNHTVETS-NAMMVGLV 327
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ EA+ +F M R I+ + V ACAE G +G QV KSG D D+
Sbjct: 328 RAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDIC 387
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
NN ++ YG C+ +A +F M ++ VSWN II +N + + +F +M G
Sbjct: 388 VNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFG 447
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+PD+ T VL AC L +L G VH ++I+ G + + + ++DMY KCG + A+
Sbjct: 448 MKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQ 507
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
L R+ V +W+A++ G + + +EEA + FS M + + P++ TF VL C +
Sbjct: 508 KLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLA 567
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+E G + ++ + I T+ D+ A+ G + ++
Sbjct: 568 TIELGKQIHGQIIKQEMLDDEYIS-STLVDMYAKCGDMPDS 607
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 108/236 (45%), Gaps = 9/236 (3%)
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
D + N ++ Y A +FD M + VVSWN +++ + E+V FV+M
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
G PD TT V+L +C+ L LSLG VH ++ G ++ + G+AL+DMY KC ++
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
A F M E N +W A I G Q+ LELF M+ + + ++ +C
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261
Query: 343 HAGMVEDGYRYFHEMEHVHGIK----PMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ G + H H IK R+ + D+ A+A L +A +P
Sbjct: 262 AMSCLNTGRQL-----HAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 312
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/421 (36%), Positives = 231/421 (54%), Gaps = 5/421 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I + + + F +M R G+KP +FTY VLKACA + L G+ V
Sbjct: 418 VSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDK 477
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V KSGL SD + + +V Y C +A K+ D + + VVSWN I++ N EA
Sbjct: 478 VIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEA 537
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+F +M D+G +PD T VL C L + LGK +H Q+I++ + + + + L+DM
Sbjct: 538 QKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDM 597
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG + + L+F ++E+ + +W+AMI G A HG EAL +F M+ ++ PN+ TF
Sbjct: 598 YAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATF 657
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ VL AC+H G+ +DG RYFH M + ++P H+ M DIL R+ +EA FI +MP
Sbjct: 658 VAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMP 717
Query: 395 FQPNPIVLRALLSASSIHDAKYQD-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
FQ + ++ + LLS I QD + +L L+P S ++++N YAE G W
Sbjct: 718 FQADAVIWKTLLSICKIR----QDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWA 773
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLN 513
VS RR +K LKK G SW+E+ +H F G + +Y++L L MK+
Sbjct: 774 DVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSG 833
Query: 514 F 514
+
Sbjct: 834 Y 834
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 163/334 (48%), Gaps = 7/334 (2%)
Query: 91 DSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P P WN L+ GY +E+V +F++M RRG+ P T+ +LK+C+ + L+
Sbjct: 107 DGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELS 166
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G+QV A K+GL+ DV T + LV YG CR DA F M ER+ VSW I CV
Sbjct: 167 LGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCV 226
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+N + F++M+ LG + + +C + L+ G+ +H I+ +
Sbjct: 227 QNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRV 286
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+GTA++D+YAK ++ AR F + V T +AM++GL + G EA+ LF M SS
Sbjct: 287 VGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSS 346
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
I + V+ GV AC G + H + G + + D+ + L EA
Sbjct: 347 IRFDVVSLSGVFSACAETKGYFQG-QQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEA 405
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGV 420
Y M Q + + A+++A + Y D +
Sbjct: 406 YLIFQGMK-QKDSVSWNAIIAALE-QNGHYDDTI 437
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 165/341 (48%), Gaps = 4/341 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HA + +D + +V + + +LT AR N +V N ++ G
Sbjct: 271 QLHAHAIKNKFSSDRVVGTAIVD--VYAKANSLTDARRAFFGLPNHTVETS-NAMMVGLV 327
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ EA+ +F M R I+ + V ACAE G +G QV KSG D D+
Sbjct: 328 RAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDIC 387
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
NN ++ YG C+ +A +F M ++ VSWN II +N + + +F +M G
Sbjct: 388 VNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFG 447
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+PD+ T VL AC L +L G VH ++I+ G + + + ++DMY KCG + A+
Sbjct: 448 MKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQ 507
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
L R+ V +W+A++ G + + +EEA + FS M + + P++ TF VL C +
Sbjct: 508 KLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLA 567
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+E G + ++ + I T+ D+ A+ G + ++
Sbjct: 568 TIELGKQIHGQIIKQEMLDDEYIS-STLVDMYAKCGDMPDS 607
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 108/236 (45%), Gaps = 9/236 (3%)
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
D + N ++ Y A +FD M + VVSWN +++ + E+V FV+M
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
G PD TT V+L +C+ L LSLG VH ++ G ++ + G+AL+DMY KC ++
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
A F M E N +W A I G Q+ LELF M+ + + ++ +C
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261
Query: 343 HAGMVEDGYRYFHEMEHVHGIK----PMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ G + H H IK R+ + D+ A+A L +A +P
Sbjct: 262 AMSCLNTGRQL-----HAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 312
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 168/458 (36%), Positives = 238/458 (51%), Gaps = 41/458 (8%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN+LI Y + +A+ VF+ M GI+P E T V ACA +S + EG+Q+ A
Sbjct: 218 VSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHAR 277
Query: 155 VTK-SGLDSDVYTNNNLVRFYGSCRRKRDACKVFD------------------------- 188
V K +D+ N LV Y CRR +A VFD
Sbjct: 278 VMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKA 337
Query: 189 ------DMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
+M ER+VVSWN +I +N EAV F+ +K P T +L+AC
Sbjct: 338 ARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACAN 397
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQ------LGTALIDMYAKCGAVGCARLLFSRMEEINV 296
L +L LG+ H +++ G +G +LIDMY KCG V RL+F RM E +
Sbjct: 398 LADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDN 457
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
+W+AMI+G AQ+GY EALE+F M S P++VT +GVL AC+HAG+VE+G YF
Sbjct: 458 VSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQS 517
Query: 357 MEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKY 416
M HG+ P++ HY M D+L RAG L EA I MP +P+ +V +LL+A +H
Sbjct: 518 MTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHG--- 574
Query: 417 QDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWV 476
+G V RLLE++P S V+++N YAE+G W+ V VR+ M+ +G+ K G SW+
Sbjct: 575 NITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWI 634
Query: 477 ELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ +H F IY IL+ L MK + +
Sbjct: 635 SIQSHLHVFMVKDKRHPHKKDIYLILKILTEQMKRVGY 672
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 152/312 (48%), Gaps = 39/312 (12%)
Query: 62 ILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMK 121
+L L +F L + NL C D WN ++ G+A DR EA+ +DM
Sbjct: 91 VLGALTKFGALDEALNL-----FKCMPERDQCS--WNAMVSGFAQRDRFEEALRFVVDMH 143
Query: 122 RRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKR 181
E+++ L ACA + L+ G+Q+ + KS DVY + LV Y CR
Sbjct: 144 SEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVA 203
Query: 182 DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
A + FDDM R++VSWN +IT +N G+A+ FV+M + G EPDE T+ V SAC
Sbjct: 204 SAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACA 263
Query: 242 ELGNLSLGKWVHLQLIERGTVLN-CQLGTALIDMYAKC---------------------- 278
L + G +H ++++ N LG AL+DMYAKC
Sbjct: 264 SLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSET 323
Query: 279 ---------GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
+V ARL+FS M E NV +W+A+I G Q+G EEA+ LF +K SI P
Sbjct: 324 SMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWP 383
Query: 330 NYVTFLGVLCAC 341
+ TF +L AC
Sbjct: 384 THYTFGNLLNAC 395
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 125/258 (48%), Gaps = 9/258 (3%)
Query: 61 QILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDM 120
++ E + + ++ AR + N + +V + WN LI GY + EAV +F+ +
Sbjct: 318 DVVSETSMVSGYAKASSVKAARLMFSNMMERNV-VSWNALIAGYTQNGENEEAVRLFLLL 376
Query: 121 KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK------SGLDSDVYTNNNLVRFY 174
KR I PT +T+ +L ACA ++ L G Q ++ K SG DSD++ N+L+ Y
Sbjct: 377 KRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMY 436
Query: 175 GSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTML 234
C D VF+ M ER VSWN +I +N + EA+ F +M G PD TM+
Sbjct: 437 MKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMI 496
Query: 235 VVLSACTELGNLSLGK-WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME- 292
VLSAC+ G + G+ + IE G V T ++D+ + G + A L M
Sbjct: 497 GVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPM 556
Query: 293 EINVWTWSAMILGLAQHG 310
E + W +++ HG
Sbjct: 557 EPDAVVWGSLLAACKVHG 574
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 132/299 (44%), Gaps = 33/299 (11%)
Query: 131 TYPF--VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD 188
+ PF +L C + + E V A + K+ S+++ N LV YG C DA KVFD
Sbjct: 19 SSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFD 78
Query: 189 DMCERSVVSWNVIITVCVENLWLGEAVGYF------------------------------ 218
M +R+ SWN ++ + L EA+ F
Sbjct: 79 HMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRF 138
Query: 219 -VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
V M F +E + LSAC L +LS+G +H + + L+ +G+AL+DMY+K
Sbjct: 139 VVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSK 198
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
C V A+ F M+ N+ +W+++I Q+G A +ALE+F M N I P+ +T V
Sbjct: 199 CRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASV 258
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
AC + +G + + + + + + D+ A+ + EA MP +
Sbjct: 259 ASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLR 317
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
DL F D + +L C + ++ + VH ++I+ + L+D+Y KCG +
Sbjct: 13 DLSF-LDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLE 71
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM 322
AR +F M++ N ++W+A++ L + G +EAL LF M
Sbjct: 72 DARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCM 111
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 174/493 (35%), Positives = 248/493 (50%), Gaps = 44/493 (8%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+HA + G+ +A + LV T A C+ P+ WN LI G+
Sbjct: 45 VHAHVVRLGMGRNAHVASSLVAAYTAGGDGAAARALVGECD-----TPVAWNALISGHNR 99
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE---GMQVQANVTKSGLDSD 163
R E+ F+DM R G PT TY VL AC + G + GMQV V SG+ D
Sbjct: 100 GGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGK--GTRDVLLGMQVHGRVVGSGVLPD 157
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII--------------------- 202
+ N LV Y C A KVFD M RSVVSW ++
Sbjct: 158 LRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPE 217
Query: 203 ------TVCVEN-LWLG---EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
T ++ +W EA+ F +M+ DE TM+ V++AC +LG L +G+WV
Sbjct: 218 RDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWV 277
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
+ + +G ++ +G ALIDMY+KCG++ A +F M + +TW+A+ILGLA +GY
Sbjct: 278 RVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYE 337
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
EEA+E+F M S +P+ VTF+GVL AC HAG+V+ G +F M + I P +HY
Sbjct: 338 EEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGC 397
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELE 432
+ D+L RAG + EA I MP PN + LL+A +H +G V RLLEL+
Sbjct: 398 IIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHG---NSEIGELVAERLLELD 454
Query: 433 PRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQ 492
P S ++++N YA+ WE V +R + G+KK G S +E+ G IH F +G S
Sbjct: 455 PENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEMDGIIHEFVAGDQSH 514
Query: 493 VELAGIYQILETL 505
IY LE++
Sbjct: 515 PMSKEIYSKLESI 527
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 136/314 (43%), Gaps = 21/314 (6%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW 97
C +++ +QV + + +L L R + +++L + + + + W
Sbjct: 171 CADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLF-------DRMPERDTVSW 223
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
+I GY W+ R REA+ +F +M+ + EFT V+ ACA++ L G V+ +++
Sbjct: 224 TAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSR 283
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
G+ D + N L+ Y C A VF M R +W II N + EA+
Sbjct: 284 QGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEM 343
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQLGTALIDMYA 276
F +M + PDE T + VL+ACT G + G+ L +IE + N +ID+
Sbjct: 344 FHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLG 403
Query: 277 KCGAVGCARLLFSRMEEI-NVWTWSAMILGLAQHG-------YAEEALELFSNMKNSSIS 328
+ G + A +M N W ++ HG AE LEL + +NS +
Sbjct: 404 RAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLEL--DPENSMV- 460
Query: 329 PNYVTFLGVLCACN 342
Y+ + CN
Sbjct: 461 --YILLSNIYAKCN 472
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 144/318 (45%), Gaps = 39/318 (12%)
Query: 112 EAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN----EGMQVQANVTKSGLDSDVYTN 167
+AV + M RG +P +T+P +LKA A +G + V A+V + G+ + +
Sbjct: 2 DAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVA 61
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
++LV Y + A + + C+ + V+WN +I+ GE+ G FV M G
Sbjct: 62 SSLVAAYTAGGDGAAARALVGE-CD-TPVAWNALISGHNRGGRFGESCGSFVDMARAGAA 119
Query: 228 PDETTMLVVLSACTE-LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC-------- 278
P T + VLSAC + ++ LG VH +++ G + + ++ AL+DMYA+C
Sbjct: 120 PTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWK 179
Query: 279 -----------------------GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEA 315
G V AR LF RM E + +W+AMI G EA
Sbjct: 180 VFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREA 239
Query: 316 LELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMAD 375
LE+F M+ S++S + T + V+ AC G +E G + GIK + + D
Sbjct: 240 LEMFREMQYSNVSADEFTMVSVITACAQLGALEMG-EWVRVYMSRQGIKMDAFVGNALID 298
Query: 376 ILARAGHLKEAYTFIMNM 393
+ ++ G ++ A M
Sbjct: 299 MYSKCGSIERALDVFKGM 316
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 166/495 (33%), Positives = 252/495 (50%), Gaps = 39/495 (7%)
Query: 49 AQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSD 108
+Q G D ++ V F ++S S + AR + V + WN LI GY S
Sbjct: 145 GHVQKLGFSADVFVVNAGVHFWSVSGS--MVLARRLFDESPARDV-VSWNTLIGGYVRSG 201
Query: 109 RPREAVWVFIDMKRRG--IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
PREA+ +F + G ++P E T + CA++ L G ++ V G+ V
Sbjct: 202 LPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRL 261
Query: 167 NNNLVRFYGSCRR-------------------------------KRDACKVFDDMCERSV 195
N ++ Y C DA +FD+M ER V
Sbjct: 262 MNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDV 321
Query: 196 VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQ 255
WN ++ V+N EA+ F +M++ +P+E TM+ +LSAC++LG L +G WVH
Sbjct: 322 FPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHY 381
Query: 256 LIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEA 315
+ L+ LGT+L+DMYAKCG + A +F + + N TW+AMI GLA HG+A+EA
Sbjct: 382 IDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGLANHGHADEA 441
Query: 316 LELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMAD 375
+E F M + + P+ +TF+GVL AC HAG+V++G ++F M + ++ HY M D
Sbjct: 442 IEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMID 501
Query: 376 ILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
+L RAGHL EA + MP P+ +V AL A +H +G + +L+EL+P
Sbjct: 502 LLGRAGHLDEAEQLVNTMPMDPDAVVWGALFFACRMHG---NITLGEKAAMKLVELDPSD 558
Query: 436 SQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVEL 495
S V++AN YAE M +K VR M+++G++K+ G S +EL G +H F S ++
Sbjct: 559 SGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHLDT 618
Query: 496 AGIYQILETLNLHMK 510
IY L + L MK
Sbjct: 619 IAIYDCLHGITLQMK 633
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 148/302 (49%), Gaps = 34/302 (11%)
Query: 126 KPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACK 185
+P T+PF+LKACA + G V +V K G +DV+ N V F+ A +
Sbjct: 118 RPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVHFWSVSGSMVLARR 177
Query: 186 VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG--FEPDETTMLVVLSACTEL 243
+FD+ R VVSWN +I V + EA+ F ++ + G PDE TM+ +S C ++
Sbjct: 178 LFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQM 237
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA----------------------- 280
G+L LGK +H + +G +L A++DMY KCG+
Sbjct: 238 GDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMI 297
Query: 281 VGCARL--------LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
VG ARL LF M E +V+ W+A++ G Q+ +EA+ LF M+ S + PN +
Sbjct: 298 VGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEI 357
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
T + +L AC+ G +E G H ++ H + ++ D+ A+ G++K+A
Sbjct: 358 TMVNLLSACSQLGALEMGMWVHHYIDR-HQLYLSVALGTSLVDMYAKCGNIKKAICIFKE 416
Query: 393 MP 394
+P
Sbjct: 417 IP 418
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/420 (35%), Positives = 225/420 (53%), Gaps = 3/420 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I + E + F M ++P +FTY VLKACA LN GM++
Sbjct: 450 VSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTR 509
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ KSG+ D + LV Y C A K+ D ++++VSWN II+ +A
Sbjct: 510 IIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDA 569
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+F +M ++G PD T VL C L + LGK +H Q+I++ + + + L+DM
Sbjct: 570 HKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDM 629
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG + ++L+F + + TW+AM+ G A HG EEAL+LF +M+ ++ PN+ TF
Sbjct: 630 YSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATF 689
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ VL AC H G+V+ G YF M +G+ P HY M DIL R+G + EA + MP
Sbjct: 690 VSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMP 749
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
F+ + ++ R LLS IH V + R LL+L+P+ S V+++N YA+ GMW
Sbjct: 750 FEADAVIWRNLLSVCKIHG---NVEVAEKATRALLQLDPQDSSACVLLSNIYADAGMWGN 806
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
VS +R+ M++ LKK G SW+EL +H F G IY+ L L M+ + +
Sbjct: 807 VSEMRKMMRHNKLKKEPGCSWIELKDEVHAFLVGDKGHPRDEEIYEKLGVLIGEMQSVGY 866
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 173/363 (47%), Gaps = 14/363 (3%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
+N +I GYA SDR +A+ F + + G+ E T L ACA I G EG QV
Sbjct: 351 YNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAV 410
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
KS S++ N ++ YG C+ +A +FD M R VSWN II C +N E +
Sbjct: 411 KSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLA 470
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
+F M EPD+ T VL AC L+ G +H ++I+ G + +G AL+DMY
Sbjct: 471 HFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYC 530
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KCG + A + R E+ + +W+A+I G + +E+A + FS M ++P+ T+
Sbjct: 531 KCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAA 590
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
VL C + V G + H ++ T+ D+ ++ G+++++ P
Sbjct: 591 VLDTCANLATVGLG-KQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAP-N 648
Query: 397 PNPIVLRALLSASSIHDAKYQDGVGNEVRR-----RLLELEPRGSQNLVIVANKYAEVGM 451
+ + A+L + H G+G E + +L+ ++P + V V A +G+
Sbjct: 649 RDFVTWNAMLCGYAHH------GLGEEALKLFESMQLVNVKPNHA-TFVSVLRACAHMGL 701
Query: 452 WEK 454
+K
Sbjct: 702 VDK 704
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 135/247 (54%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN++I G+ + R+++ VF++M R G+ + VLKAC + + G+QV
Sbjct: 147 VSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGL 206
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V K G D DV T + L+ Y C+R D+ VF ++ E++ VSW+ +I CV+N E
Sbjct: 207 VVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEG 266
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M+ +G ++ + +C L L LGK +H ++ + +GTA +DM
Sbjct: 267 LELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDM 326
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG + A+ + S M + ++ +++A+I+G A+ +AL+ F + + + + +T
Sbjct: 327 YAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITL 386
Query: 335 LGVLCAC 341
G L AC
Sbjct: 387 SGALNAC 393
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 134/296 (45%), Gaps = 34/296 (11%)
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD-- 188
T+ + + C++ + LN G Q A + G + + +N L++ Y C ACKVFD
Sbjct: 51 TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110
Query: 189 -----------------------------DMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
+M ER VVSWN +I+ ++N +++ F+
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+M G D ++ VVL AC L +G VH +++ G + G+AL+ MYAKC
Sbjct: 171 EMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCK 230
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
+ + +FS + E N +WSAMI G Q+ E LELF M+ + + + +
Sbjct: 231 RLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFR 290
Query: 340 ACNHAGMVEDGYR-YFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+C + G + H ++ G + + T+ D+ A+ G + +A + +MP
Sbjct: 291 SCAALSALRLGKELHSHALKSAFG-SDIIVGTATL-DMYAKCGRMADAQKVLSSMP 344
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 17/200 (8%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILCNYVNDSVPIPWNNLIR 102
QIHAQI LQ+D I LV C L + ++ ++V WN ++
Sbjct: 606 QIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVT------WNAMLC 659
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ-VQANVTKSGLD 161
GYA EA+ +F M+ +KP T+ VL+ACA + +++G+ +++ GLD
Sbjct: 660 GYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLD 719
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVCV--ENLWLGEAVGYF 218
+ +V G R +A + M E V W +++VC N+ + E
Sbjct: 720 PQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRA 779
Query: 219 VKMKDLGFEPDETTMLVVLS 238
+ L +P +++ V+LS
Sbjct: 780 L----LQLDPQDSSACVLLS 795
>gi|297851626|ref|XP_002893694.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339536|gb|EFH69953.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 164/499 (32%), Positives = 268/499 (53%), Gaps = 11/499 (2%)
Query: 15 PKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQ-IQVSGLQNDAQILKELVRFCTLS 73
P+ +NC K ++CL LK C + Q+HA+ I++S + + ++ C S
Sbjct: 22 PEVNNCGG----KEQECLYLLKRCNNIDEFKQVHARFIKLSLFCSSSFSASSVLAKCAHS 77
Query: 74 SSKN-LTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
+N + YA SI ++D + +IRGY A+ + +M RGI+P FTY
Sbjct: 78 GWENSMNYAASIF-RGIDDPCTFDFKTMIRGYVNEMSFEVALCFYNEMMERGIEPDNFTY 136
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
P +LKAC + + EG Q+ +V K GL++DV+ N+L+ YG C + VF+ +
Sbjct: 137 PCLLKACTRLKAIREGKQIHGHVFKLGLEADVFVQNSLINMYGRCGEMELSSTVFEKLEF 196
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKM-KDLGFEPDETTMLVVLSACTELGNLSLGKW 251
+S SW+ + + CV E + F +M ++ + +E+ M+ LSAC G L+LG
Sbjct: 197 KSAASWSSMFSACVGMGMWSECLMLFREMCRETNLKAEESGMVSALSACANTGALNLGMS 256
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+H L+ + LN + T+L+DMY KCG + A +F +ME+ N T+SAMI G A HG
Sbjct: 257 IHGFLLRNISELNIIVKTSLVDMYVKCGCIDNALHIFQKMEKRNNLTYSAMISGFALHGE 316
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
E AL +FS M + P++V ++ +L AC+H+G+V++G R F EM ++P HY
Sbjct: 317 GESALRMFSEMIKEGLEPDHVVYVSLLNACSHSGLVKEGRRVFGEMLKEGKVEPTAEHYG 376
Query: 372 TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLEL 431
+ D+L RAG L+EA I ++P + N +V R+ LS +H +G + LL+L
Sbjct: 377 CLVDLLGRAGLLEEALETIQSIPIEQNDVVWRSFLSQCRVHQ---NIELGQIAAQELLKL 433
Query: 432 EPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDS 491
+ ++++N Y++ MW+ V+ R + GLK+ G S V++ G HRF S S
Sbjct: 434 CSHNPGDYLLISNMYSQAHMWDDVARSRTEIAIKGLKQTPGFSTVKVKGKTHRFVSQDRS 493
Query: 492 QVELAGIYQILETLNLHMK 510
+ IY++L + +K
Sbjct: 494 HPQCKEIYKMLHQMEWQLK 512
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/421 (36%), Positives = 231/421 (54%), Gaps = 5/421 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I + + + F +M R G+KP +FTY VLKACA + L G+ V
Sbjct: 460 VSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDK 519
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V KSGL SD + + +V Y C +A K+ D + + VVSWN I++ N EA
Sbjct: 520 VIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEA 579
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+F +M D+G +PD T VL C L + LGK +H Q+I++ + + + + L+DM
Sbjct: 580 QKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDM 639
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG + + L+F ++E+ + +W+AMI G A HG EAL +F M+ ++ PN+ TF
Sbjct: 640 YAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATF 699
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ VL AC+H G+ +DG RYFH M + ++P H+ M DIL R+ +EA FI +MP
Sbjct: 700 VAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMP 759
Query: 395 FQPNPIVLRALLSASSIHDAKYQD-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
FQ + ++ + LLS I QD + +L L+P S ++++N YAE G W
Sbjct: 760 FQADAVIWKTLLSICKIR----QDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWA 815
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLN 513
VS RR +K LKK G SW+E+ +H F G + +Y++L L MK+
Sbjct: 816 DVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSG 875
Query: 514 F 514
+
Sbjct: 876 Y 876
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 163/334 (48%), Gaps = 7/334 (2%)
Query: 91 DSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P P WN L+ GY +E+V +F++M RRG+ P T+ +LK+C+ + L+
Sbjct: 149 DGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELS 208
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G+QV A K+GL+ DV T + LV YG CR DA F M ER+ VSW I CV
Sbjct: 209 LGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCV 268
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+N + F++M+ LG + + +C + L+ G+ +H I+ +
Sbjct: 269 QNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRV 328
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+GTA++D+YAK ++ AR F + V T +AM++GL + G EA+ LF M SS
Sbjct: 329 VGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSS 388
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
I + V+ GV AC G + H + G + + D+ + L EA
Sbjct: 389 IRFDVVSLSGVFSACAETKGYFQG-QQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEA 447
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGV 420
Y M Q + + A+++A + Y D +
Sbjct: 448 YLIFQGMK-QKDSVSWNAIIAALE-QNGHYDDTI 479
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 165/341 (48%), Gaps = 4/341 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HA + +D + +V + + +LT AR N +V N ++ G
Sbjct: 313 QLHAHAIKNKFSSDRVVGTAIVD--VYAKANSLTDARRAFFGLPNHTVETS-NAMMVGLV 369
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ EA+ +F M R I+ + V ACAE G +G QV KSG D D+
Sbjct: 370 RAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDIC 429
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
NN ++ YG C+ +A +F M ++ VSWN II +N + + +F +M G
Sbjct: 430 VNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFG 489
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+PD+ T VL AC L +L G VH ++I+ G + + + ++DMY KCG + A+
Sbjct: 490 MKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQ 549
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
L R+ V +W+A++ G + + +EEA + FS M + + P++ TF VL C +
Sbjct: 550 KLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLA 609
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+E G + ++ + I T+ D+ A+ G + ++
Sbjct: 610 TIELGKQIHGQIIKQEMLDDEYIS-STLVDMYAKCGDMPDS 649
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 108/236 (45%), Gaps = 9/236 (3%)
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
D + N ++ Y A +FD M + VVSWN +++ + E+V FV+M
Sbjct: 124 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 183
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
G PD TT V+L +C+ L LSLG VH ++ G ++ + G+AL+DMY KC ++
Sbjct: 184 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 243
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
A F M E N +W A I G Q+ LELF M+ + + ++ +C
Sbjct: 244 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 303
Query: 343 HAGMVEDGYRYFHEMEHVHGIK----PMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ G + H H IK R+ + D+ A+A L +A +P
Sbjct: 304 AMSCLNTGRQL-----HAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 354
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 173/493 (35%), Positives = 264/493 (53%), Gaps = 19/493 (3%)
Query: 29 RQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
+ CL L + L Q A + SGL ++ +L L ++ L ++
Sbjct: 23 QHCLRLLAASSTPTSLLQSVAFLLKSGLHANSLVLTRLFAASASAAPALLD---PLVTAL 79
Query: 89 VNDSVPIPW---NNLIRGYAWSD----RPREAVWVFIDMKRRGIKPTEFTYPFVLKACAE 141
+ SVP+ N LIR +A S R R A + F M R + P +FT+PF+LKACA
Sbjct: 80 LRPSVPLDAFLANTLIRAHATSPIHSLRLRAAAF-FPLMLRGAVVPNKFTFPFLLKACAA 138
Query: 142 ISGLNE-GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKR---DACKVFDDMCERSVVS 197
+ G + G+Q A K G +D Y +N L+ Y SC DA VFD M + S V+
Sbjct: 139 LPGSPDVGLQAHAAALKFGFATDQYVSNTLIHMY-SCFGGGFLGDARNVFDRMPKESAVT 197
Query: 198 WNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLI 257
W+ +I V +AV F +M+ G + DE T++ VL+A T+LG L L +WV +
Sbjct: 198 WSAMIGGYVRGGLSSDAVDLFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFVE 257
Query: 258 ERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALE 317
G + L ALID AKCG V A +F M++ +V +W+++I LA G +EA+
Sbjct: 258 REGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVR 317
Query: 318 LFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL 377
+F MK + + P+ V F+GVL AC+HAGMV++G YF M+ +GI+P HY M D+
Sbjct: 318 VFEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMF 377
Query: 378 ARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
RAG ++ A F+ MP QPNP++ R+L+SA H + +G + R LL P
Sbjct: 378 GRAGMVERAMEFVRTMPIQPNPVIWRSLVSACRAHG---RLELGESITRSLLHEYPAHEA 434
Query: 438 NLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAG 497
N ++++N +A W++ S +RR M G+KK+ G S VEL G +H F +G +S +
Sbjct: 435 NYIMLSNVFALTQRWKEKSEIRREMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKD 494
Query: 498 IYQILETLNLHMK 510
IY+++E + ++
Sbjct: 495 IYRMVEEMARELR 507
>gi|255564780|ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537334|gb|EEF38963.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 538
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 167/512 (32%), Positives = 266/512 (51%), Gaps = 41/512 (8%)
Query: 29 RQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLT-YARSILCN 87
+Q + L C + KHL+Q HA + L +D +L F SSS + YA S+ +
Sbjct: 12 KQVIWLLNHCSNLKHLHQTHAFMLCRALDHDNLLLS---LFIQSSSSLGFSLYAYSLFTS 68
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+ +N +IR + S +P ++++F ++ ++P +++PF LKA +S
Sbjct: 69 LTHPPNIFLYNTIIRALSLSPQPSLSIFLFNRIQSARLRPDSYSFPFALKAVIRLSATKT 128
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGS-----CRRKRD-------------------- 182
G+Q + + GL S ++ +L+R Y S R+ D
Sbjct: 129 GLQFHSQAIRFGLHSHLHVLVSLIRMYSSSHISDARKLFDGIPLTARNVALWNAMLTSYA 188
Query: 183 -------ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLV 235
A +FD M +R+++SW +I+ +A+ F M+ PDE T+L
Sbjct: 189 KICDMPNAQHLFDSMPQRNLISWTALISGYAHINRPHQAIAIFRTMQLQNVVPDEITLLA 248
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
VLSAC +LG L LG+W+ + G N L ALIDMYAK G + A L+F M+
Sbjct: 249 VLSACAQLGALELGEWIRNYIDIHGLHRNVPLHNALIDMYAKSGNIKRALLIFESMKHKT 308
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
+ TW+ MI GLA HG +ALE+FS M+ + PN +TF+ VL AC+H G+V+ +F
Sbjct: 309 IVTWTTMIAGLALHGLGTQALEMFSRMERDRVKPNEITFIAVLSACSHVGLVQLARSFFT 368
Query: 356 EMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH-DA 414
M + I+P HY M D+L RAG+L+EA + MPF+PN + +LL+AS H DA
Sbjct: 369 NMRSRYTIQPKIEHYGCMIDLLGRAGYLQEAQQLLQQMPFEPNAAIWGSLLAASYTHGDA 428
Query: 415 KYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMS 474
+G + L+ELEP S N +++N YA +G W+ VR+ M++ G+KK+ G S
Sbjct: 429 M----LGERTLKHLIELEPNNSGNYALLSNIYASLGRWKASRIVRKMMRDRGVKKIPGGS 484
Query: 475 WVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
++E+ ++ F +G S + IY+++ +N
Sbjct: 485 FIEVNNRVNEFIAGETSHPQFDEIYEVIYKIN 516
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 180/531 (33%), Positives = 264/531 (49%), Gaps = 29/531 (5%)
Query: 1 MVRFPVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSG--LQN 58
M P+ T P S L++L C S + L Q+HA +G LQ
Sbjct: 1 MSSSPLTATPSPLLPAKSKNPPPHHHHHNPLLAYLPHCTSLRALAQLHAVAVKAGGGLQA 60
Query: 59 DAQILKELVRFCTLSSSK---NLTYARSILCNYVNDSVPIP----WNNLI-----RGYAW 106
+ L+ CT ++ +L YAR + D +P P W N + RG
Sbjct: 61 HPAFVTRLLTLCTEQGAEAPAHLAYARQVF-----DRIPHPGDVVWYNTLLRGYARGGGG 115
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
EA VF+ M G+ P +T+ +LKACA EG Q K+G Y
Sbjct: 116 GGGAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYV 175
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
L+ Y C R A +FD M VVS+N +IT V + GEA+ F +M+ G
Sbjct: 176 APTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGL 235
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
+P T++ VLSAC LG L LG+W+H + + ++ TALIDMYAKCG++ A
Sbjct: 236 KPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIG 295
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
+F ME + WS M++ A HGY EA+ +F MK + P+ VTFLGVL AC+H+GM
Sbjct: 296 VFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGM 355
Query: 347 VEDGYRYFHEMEH---VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
V +G +YF M V GIK HY + D+LAR+G L+ AY FI +P +P I+ R
Sbjct: 356 VSEGLQYFDSMREYGIVSGIK----HYGCVTDLLARSGQLERAYKFIDELPIKPTAILWR 411
Query: 404 ALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMK 463
LLSA + H +G V R+LEL+ + VI +N A G WE+++ VR+ M
Sbjct: 412 TLLSACAGHG---DVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMS 468
Query: 464 NVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
G+ K+ G S +E+ +H F++G S ++++ + +K++ +
Sbjct: 469 EKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGY 519
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 180/531 (33%), Positives = 264/531 (49%), Gaps = 29/531 (5%)
Query: 1 MVRFPVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSG--LQN 58
M P+ T P S L++L C S + L Q+HA +G LQ
Sbjct: 1 MSSSPLTATPSPLLPAKSKNPPPHHHHHNPLLAYLPHCTSLRALAQLHAVAVKAGGGLQA 60
Query: 59 DAQILKELVRFCTLSSSK---NLTYARSILCNYVNDSVPIP----WNNLI-----RGYAW 106
+ L+ CT ++ +L YAR + D +P P W N + RG
Sbjct: 61 HPAFVTRLLTLCTEQGAEAPAHLAYARQVF-----DRIPHPGDVIWYNTLLRGYARGGGG 115
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
EA VF+ M G+ P +T+ +LKACA EG Q K+G Y
Sbjct: 116 GGGAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYV 175
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
L+ Y C R A +FD M VVS+N +IT V + GEA+ F +M+ G
Sbjct: 176 APTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGL 235
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
+P T++ VLSAC LG L LG+W+H + + ++ TALIDMYAKCG++ A
Sbjct: 236 KPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIG 295
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
+F ME + WS M++ A HGY EA+ +F MK + P+ VTFLGVL AC+H+GM
Sbjct: 296 VFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGM 355
Query: 347 VEDGYRYFHEMEH---VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
V +G +YF M V GIK HY + D+LAR+G L+ AY FI +P +P I+ R
Sbjct: 356 VSEGLQYFDSMREYGIVSGIK----HYGCVTDLLARSGQLERAYKFIDELPIKPTAILWR 411
Query: 404 ALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMK 463
LLSA + H +G V R+LEL+ + VI +N A G WE+++ VR+ M
Sbjct: 412 TLLSACAGHG---DVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMS 468
Query: 464 NVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
G+ K+ G S +E+ +H F++G S ++++ + +K++ +
Sbjct: 469 EKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGY 519
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 164/455 (36%), Positives = 236/455 (51%), Gaps = 12/455 (2%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSK---NLTYARSILCNYVNDSVPIPWNNLIR 102
++H I G +D + LV + S L + ++ N V+ W +I
Sbjct: 149 EVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVS------WTAVIA 202
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
GY + +E + VF +M G +P T VL ACA + LN G + K G+D
Sbjct: 203 GYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDP 262
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
DV N L+ YG C A +FD M +++VSWN +I +N AV F +M+
Sbjct: 263 DVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQ 322
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
+ D TM+ V+SAC LG L+ G+W+H + +G +N + ALIDMYAKCG +
Sbjct: 323 AEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNID 382
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
AR +F R+ +V +W++MI A HG+ E+AL+LFS MK+ + PN TF V AC
Sbjct: 383 LAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACR 442
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVL 402
H+G+VE+G ++F M + I P H M D+L RAG L EAY FI MP +P+ V
Sbjct: 443 HSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVW 502
Query: 403 RALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFM 462
ALL + IH + V +L L+P+ V+++N YAE G WE + +R+ M
Sbjct: 503 GALLGSCRIHS---NLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLM 559
Query: 463 KNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAG 497
+ LKK+ G S VE+ H F SG SQ L G
Sbjct: 560 EERELKKIPGHSLVEVNRRFHTFLSGSRSQSSLRG 594
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 204/403 (50%), Gaps = 12/403 (2%)
Query: 34 FLKLCCSKKHLYQIHAQIQVSGL-QNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDS 92
L C S L +IHA + +G QN K ++ C L+ + + YAR +
Sbjct: 35 LLNCCSSLPDLSRIHALVVTNGCGQNLLLSTKLIITACCLAPT--MDYARKMFDQMPKRD 92
Query: 93 VPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQ 152
V + WN LIRGYA + EA+ ++ +M G+ P +T+PFV+++CA +S L EG +V
Sbjct: 93 VFL-WNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVH 151
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
N+ K G DSDV+ ++LV Y VF +M R++VSW +I V+N +
Sbjct: 152 CNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFK 211
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
E +G F +M G +P+ T++ VL AC L L+LGK +H I+ G + L ALI
Sbjct: 212 EGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALI 271
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
+Y KCG V AR LF M N+ +W+AMI Q+ A++LF M+ + +Y+
Sbjct: 272 ALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYI 331
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
T + V+ AC G + G R+ HE+ G++ + + D+ A+ G++ A
Sbjct: 332 TMVSVISACASLGALNTG-RWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFER 390
Query: 393 MPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
+P R+++S +S+ A G G + + ++ G
Sbjct: 391 LP-------CRSVVSWTSMIGACASHGHGEDALKLFSRMKDEG 426
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 152/437 (34%), Positives = 233/437 (53%), Gaps = 23/437 (5%)
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ WN +I + + + E +++F+ M R I+P EFT+ VLKAC S L GM++ +
Sbjct: 406 AVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTGGS-LGYGMEIHS 464
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS------------------- 194
++ KSG+ S+ +L+ Y C +A K+ +R+
Sbjct: 465 SIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQE 524
Query: 195 -VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
VSWN II+ V +A F +M ++G PD+ T VL C L + LGK +H
Sbjct: 525 MCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIH 584
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
Q+I++ + + + L+DMY+KCG + +RL+F + + TW+AMI G A HG E
Sbjct: 585 AQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGE 644
Query: 314 EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
EA++LF M +I PN+VTF+ +L AC H G+++ G YF+ M+ +G+ P HY M
Sbjct: 645 EAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNM 704
Query: 374 ADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP 433
DIL ++G +K A I MPF+ + ++ R LL +IH + V E LL L+P
Sbjct: 705 VDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVE--VAEEATAALLRLDP 762
Query: 434 RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQV 493
+ S +++N YA+ GMWEKVS++RR M+ LKK G SWVEL +H F G +
Sbjct: 763 QDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHP 822
Query: 494 ELAGIYQILETLNLHMK 510
IY+ L + MK
Sbjct: 823 RWEEIYEELGLIYSEMK 839
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 140/260 (53%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN+++ GY + +++ VF+DM R G + T+ +LK C+ + + GMQ+
Sbjct: 104 VSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGV 163
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V + G D+DV + L+ Y +R ++ +VF + E++ VSW+ II CV+N L A
Sbjct: 164 VVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLA 223
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ +F +M+ + ++ VL +C L L LG +H ++ + + TA +DM
Sbjct: 224 LKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDM 283
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKC + A++LF + E +N +++AMI G +Q + +AL LF + +S + + ++
Sbjct: 284 YAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISL 343
Query: 335 LGVLCACNHAGMVEDGYRYF 354
GV AC + +G + +
Sbjct: 344 SGVFRACALVKGLSEGLQIY 363
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 157/335 (46%), Gaps = 33/335 (9%)
Query: 33 SFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTL---SSSKNLTYARSILC 86
S L+ C + L Q+HA S D +VR TL + N+ A+ IL
Sbjct: 244 SVLRSCAALSELRLGGQLHAHALKSDFAADG-----IVRTATLDMYAKCDNMQDAQ-ILF 297
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
+ + +N +I GY+ + +A+ +F + G+ E + V +ACA + GL+
Sbjct: 298 DKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLS 357
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
EG+Q+ KS L DV N + YG C+ +A +VFD+M R VSWN II
Sbjct: 358 EGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHE 417
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+N E + FV M EPDE T VL ACT G+L G +H +++ G N
Sbjct: 418 QNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSS 476
Query: 267 LGTALIDMYAKCGAVGCARLLFSR----------MEEINVW----------TWSAMILGL 306
+G +LIDMY+KCG + A + SR MEE+ +W+++I G
Sbjct: 477 VGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGY 536
Query: 307 AQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
+E+A LF+ M I+P+ T+ VL C
Sbjct: 537 VMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTC 571
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 97/234 (41%), Gaps = 31/234 (13%)
Query: 139 CAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSW 198
CA+ L G Q A++ SG + N L++ Y + R A VFD M R VVSW
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75
Query: 199 NVIITVCVEN-------------------LWLGEAVGY------------FVKMKDLGFE 227
N +I ++ W GY FV M G E
Sbjct: 76 NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
D T ++L C+ L + SLG +H ++ G + +AL+DMYAK + +
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
F + E N +WSA+I G Q+ AL+ F M+ + + + VL +C
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSC 249
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILCNYVNDSVPIPWNNLIR 102
QIHAQ+ LQ+D I LV C L + +S+ ++V WN +I
Sbjct: 582 QIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVT------WNAMIC 635
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS-GLD 161
GYA + EA+ +F M IKP T+ +L+ACA + +++G++ + + GLD
Sbjct: 636 GYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLD 695
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVCV 206
+ +N+V G + + A ++ +M E V W ++ VC
Sbjct: 696 PQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCT 741
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 171/466 (36%), Positives = 256/466 (54%), Gaps = 9/466 (1%)
Query: 42 KHLYQIHAQIQVSGLQNDAQILKELVRFCTLS-SSKNLTYARSILCNYVNDSVPIPWNNL 100
+ L Q HA + V+G +L +L+ TLS ++ ++ Y R + V+D +N+L
Sbjct: 24 RRLQQAHAHLVVTGCHRSRALLTKLL---TLSCAAGSIAYTRRLF-RSVSDPDSFLFNSL 79
Query: 101 IRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGL 160
I+ + +AV + M I P+ +T+ V+KACA++S L G V ++V SG
Sbjct: 80 IKASSKFGFSLDAVLFYRRMLLSRIVPSTYTFTSVIKACADLSLLCIGTLVHSHVFVSGY 139
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK 220
SD + L+ FY R A KVFD+M +RS+V+WN +I+ +N EAV F K
Sbjct: 140 ASDSFVQAALIAFYAKSCTPRVARKVFDEMPQRSIVAWNSMISGYEQNGLANEAVEVFNK 199
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
M++ EPD T + VLSAC++LG+L G W+H ++ G +N L T+L++M+++CG
Sbjct: 200 MRESRVEPDSATFVSVLSACSQLGSLDFGCWLHDCIVGSGITMNVVLATSLVNMFSRCGD 259
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
VG AR +F M E NV W+AMI G HGY EA+E+F MK + PN VTF+ VL A
Sbjct: 260 VGRARAVFYSMIEGNVVLWTAMISGYGMHGYGVEAMEVFHRMKARGVVPNSVTFVAVLSA 319
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM-PFQPNP 399
C HAG++++G F M+ +G+ P H+ M D+ R G L EAY F+ + + P
Sbjct: 320 CAHAGLIDEGRSVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVKGLNSDELVP 379
Query: 400 IVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVR 459
V A+L A +H K D +G EV L+ EP + V+++N YA G ++V +VR
Sbjct: 380 AVWTAMLGACKMH--KNFD-LGVEVAENLINAEPENPGHYVLLSNMYALAGRMDRVESVR 436
Query: 460 RFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
M GLKK G S +++ + F G S E IY L+ L
Sbjct: 437 NVMIQRGLKKQVGYSTIDVDNRSYLFSMGDKSHPETNEIYCFLDEL 482
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 158/469 (33%), Positives = 243/469 (51%), Gaps = 6/469 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIH +G ++D + L+ S L AR IL + + W ++I GY
Sbjct: 366 QIHLLSIKTGFESDMYVSGVLIDM--YSKYGWLDKARRIL-EVLEAKDVVSWTSMIAGYV 422
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ +EA+ F DM+ GI P + ACA I + +G Q+ + V SG +DV
Sbjct: 423 QHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVS 482
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N LV Y C R ++A +F+ + + ++WN +++ ++ EA+ F+KM G
Sbjct: 483 IWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAG 542
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+ + T + +SA L ++ GK +H +I+ G ++ ALI +Y KCG++ A+
Sbjct: 543 VKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAK 602
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+ F M E N +W+ +I +QHG+ EAL+LF MK + PN VTF+GVL AC+H G
Sbjct: 603 MQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVG 662
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+VE+G YF M HGI P HY + DIL RAG L A F+ MP N +V R L
Sbjct: 663 LVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTL 722
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
LSA +H +G + LLELEP S + V+++N YA G W +VR+ MK+
Sbjct: 723 LSACRVHK---NIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDR 779
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
G++K G SW+E+ +H F+ G IY+ L L+ + + +
Sbjct: 780 GVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLAKIGY 828
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 178/367 (48%), Gaps = 16/367 (4%)
Query: 32 LSFLKLCCSKKHLYQ----IHAQIQVSGLQNDAQILKELV----RFCTLSSSKNLTYARS 83
LS + C+K L++ +HAQ+ G ++ + L+ RF +LS ++ + ++
Sbjct: 146 LSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERV-FSEM 204
Query: 84 ILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS 143
C+ V +N LI +A A+ +F +M+ G P T +L ACA I
Sbjct: 205 PYCDRVT------FNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIG 258
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
LN+G Q+ + + K+G+ D +L+ Y C +A ++F +VV WN+++
Sbjct: 259 DLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLV 318
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
+ L ++ F +M G P+E T +L CT G ++LG+ +HL I+ G
Sbjct: 319 AYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFES 378
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
+ + LIDMY+K G + AR + +E +V +W++MI G QH + +EALE F +M+
Sbjct: 379 DMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQ 438
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
I P+ + + AC + G + H +V G ++ + ++ AR G
Sbjct: 439 LFGIWPDNIGLASAISACAGIKAMRQG-QQIHSRVYVSGYSADVSIWNALVNLYARCGRS 497
Query: 384 KEAYTFI 390
KEA++
Sbjct: 498 KEAFSLF 504
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 127/256 (49%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN ++ Y ++ +F M G++P EFTYP +L+ C +N G Q+
Sbjct: 311 VLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLL 370
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K+G +SD+Y + L+ Y A ++ + + + VVSW +I V++ + EA
Sbjct: 371 SIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEA 430
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F M+ G PD + +SAC + + G+ +H ++ G + + AL+++
Sbjct: 431 LETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNL 490
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YA+CG A LF +E + TW+ M+ G AQ G EEALE+F M + + N TF
Sbjct: 491 YARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTF 550
Query: 335 LGVLCACNHAGMVEDG 350
+ + A + ++ G
Sbjct: 551 VSSISASANLADIKQG 566
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 163/356 (45%), Gaps = 19/356 (5%)
Query: 9 TNHIFPPKPSNCNSDLLSKARQC--LSFLKLCC-------SKKH---LYQIHAQIQVSGL 56
T + P S +K RQC L + C S KH + IHA+ GL
Sbjct: 14 TGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPLVPVIHAKAITCGL 73
Query: 57 QNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWV 116
D +I L+ L + K L + ++ + W ++ GYA + EAV +
Sbjct: 74 GED-RIAGNLL--IDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGL 130
Query: 117 FIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGS 176
+ M G+ PT + VL AC + + +G V A V K G S+ N L+ Y
Sbjct: 131 YHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLR 190
Query: 177 CRRKRDACKVFDDM--CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTML 234
A +VF +M C+R V++N +I+ + A+ F +M+ G+ PD T+
Sbjct: 191 FGSLSLAERVFSEMPYCDR--VTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIA 248
Query: 235 VVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI 294
+L+AC +G+L+ GK +H L++ G + + +L+D+Y KCG + A +F +
Sbjct: 249 SLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRT 308
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
NV W+ M++ Q ++ +LF M + + PN T+ +L C +AG + G
Sbjct: 309 NVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLG 364
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 112/236 (47%), Gaps = 1/236 (0%)
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+ A GL D N L+ Y + A +VF+ + R VSW +++ N
Sbjct: 64 IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
EAVG + +M G P + VLSACT+ G+ VH Q+ ++G+ +G A
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
LI +Y + G++ A +FS M + T++ +I AQ G E ALE+F M+ S +P+
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPD 243
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
VT +L AC G + G + H G+ P I ++ D+ + G + EA
Sbjct: 244 CVTIASLLAACASIGDLNKG-KQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEA 298
>gi|357125571|ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 600
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 166/437 (37%), Positives = 242/437 (55%), Gaps = 23/437 (5%)
Query: 80 YARSILCNYVNDSVPIP----WNNLIRGYAWSDR-----PREAVWVFIDMKRRGI-KPTE 129
YAR++ D +P P +N+LIR + S + ++ M G P
Sbjct: 76 YARALF-----DQIPEPTAFCYNSLIRAVSGSGSSSNSGTTDTFLLYRRMLHAGSPAPNS 130
Query: 130 FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD 189
FT FVLKAC + L EG Q+ A GL+ Y L+ Y C A VFD
Sbjct: 131 FTLAFVLKAC---TALGEGQQLHAQAFGHGLEPSPYVQTGLLNLYARCEEVALARNVFDG 187
Query: 190 MCE-RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSL 248
M E +++V+W+ +I + EA+G F M+ +G PDE TM+ V+SAC + G L L
Sbjct: 188 MVEDKNLVAWSSMIGGYSRMGMVNEALGLFRDMQAVGVNPDEVTMVSVISACAKAGALDL 247
Query: 249 GKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ 308
GKWVH + +G ++ +L TALIDMYAKCG + A+ +F M E + WSAMI+GLA
Sbjct: 248 GKWVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKSVFDSMVERDTKAWSAMIVGLAM 307
Query: 309 HGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRI 368
HG AE+AL LFS M + PN VTF+GVL AC H+G+V+DG RY+ M+ + GI+
Sbjct: 308 HGLAEDALGLFSRMLQLKVRPNNVTFVGVLSACAHSGLVDDGRRYWCTMQEL-GIEASME 366
Query: 369 HYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRL 428
+Y M D+L R+G L EA++F+ MP PN ++ R LL AS + + + RRL
Sbjct: 367 NYGCMVDLLCRSGLLDEAFSFVTGMPISPNSVIWRNLLVASK---SSNRIDIVELASRRL 423
Query: 429 LELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
ELEP+ +N V+++N YA W++V +R+ MK+ + + G S +E+ G +H+F
Sbjct: 424 FELEPQNPENYVLLSNLYALNSQWDRVRYMRKKMKDNNVTVVAGCSSIEINGYLHKFVVS 483
Query: 489 YDSQVELAGIYQILETL 505
S E+ I +L +
Sbjct: 484 DGSHPEIKKIRLVLREI 500
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 229/429 (53%), Gaps = 4/429 (0%)
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
+L AR + N + + W +I G S+R E +FI M+ I P E T ++
Sbjct: 247 HLGLARQLF-NGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLI 305
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
C L G Q+ A + ++G + LV YG C R+A +FD R V+
Sbjct: 306 VECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVM 365
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
W +++ + + +A F +M+ G P + T++ +LS C G L LGKWVH +
Sbjct: 366 IWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYI 425
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
+ ++C L TAL+DMYAKCG + A LF ++ W+A+I G A HGY EEAL
Sbjct: 426 DKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEAL 485
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
++F+ M+ + PN +TF+G+L AC+HAG+V +G + F +M H G+ P HY M D+
Sbjct: 486 DIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDL 545
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGS 436
L RAG L EA+ I +MP +PN IV AL++A +H +G +LLE+EP
Sbjct: 546 LGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHK---NPQLGELAATQLLEIEPENC 602
Query: 437 QNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELA 496
V+++N YA W + VR+ MK VG+KK G S +E+ G++H F G S ++
Sbjct: 603 GYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIR 662
Query: 497 GIYQILETL 505
I ++L +
Sbjct: 663 RINEMLAEM 671
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 117/225 (52%), Gaps = 6/225 (2%)
Query: 130 FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD 189
F P VLKAC ++S G ++ V K GLD DV+ N L+ YG C A VFD
Sbjct: 95 FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK 154
Query: 190 MCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
M ER VVSW+ +I N A+ +M + P E M+ +++ + N+ +G
Sbjct: 155 MMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMG 214
Query: 250 KWVHLQLIERGTVLNCQLG----TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
K +H +I N +G TAL+DMYAKCG +G AR LF+ + + V +W+AMI G
Sbjct: 215 KAMHAYVIRNSN--NEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAG 272
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
+ EE +LF M+ +I PN +T L ++ C G ++ G
Sbjct: 273 CIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLG 317
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 179/392 (45%), Gaps = 13/392 (3%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+IH + GL D + L+ + YAR + + V + W+ +IR +
Sbjct: 115 EIHGFVLKKGLDRDVFVGNALMLM--YGECACVEYARLVFDKMMERDV-VSWSTMIRSLS 171
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS--D 163
+ A+ + +M ++P+E ++ A+ + + G + A V ++ +
Sbjct: 172 RNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMG 231
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
V T L+ Y C A ++F+ + +++VVSW +I C+ + L E F++M++
Sbjct: 232 VPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQE 291
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
P+E TML ++ C G L LGK +H ++ G ++ L TAL+DMY KC +
Sbjct: 292 ENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRN 351
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
AR LF + +V W+AM+ AQ ++A LF M+ S + P VT + +L C
Sbjct: 352 ARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAV 411
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
AG ++ G ++ H ++ I + D+ A+ G + A + + +
Sbjct: 412 AGALDLG-KWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIE-AISRDICMWN 469
Query: 404 ALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
A+++ ++H G G E E+E +G
Sbjct: 470 AIITGFAMH------GYGEEALDIFAEMERQG 495
>gi|356502573|ref|XP_003520093.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 503
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 164/476 (34%), Positives = 253/476 (53%), Gaps = 11/476 (2%)
Query: 34 FLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSV 93
L LC + ++ + HAQ+ V G + D I L+ S NL +AR + N V
Sbjct: 26 LLNLCKTTDNVKKAHAQVVVRGHEQDPFIAARLID--KYSHFSNLDHARKVFDNLSEPDV 83
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
N +I+ YA +D EA+ V+ M+ RGI P +TYPFVLKAC +G +
Sbjct: 84 -FCCNVVIKVYANADPFGEALKVYDAMRWRGITPNYYTYPFVLKACGAEGASKKGRVIHG 142
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+ K G+D D++ N LV FY C+ + KVFD++ R +VSWN +I+ N ++ +
Sbjct: 143 HAVKCGMDLDLFVGNALVAFYAKCQDVEVSRKVFDEIPHRDIVSWNSMISGYTVNGYVDD 202
Query: 214 AVGYFVKM---KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
A+ F M + +G PD T + VL A + ++ G W+H +++ L+ +GT
Sbjct: 203 AILLFYDMLRDESVG-GPDHATFVTVLPAFAQAADIHAGYWIHCYIVKTRMGLDSAVGTG 261
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
LI +Y+ CG V AR +F R+ + +V WSA+I HG A+EAL LF + + + P+
Sbjct: 262 LISLYSNCGYVRMARAIFDRISDRSVIVWSAIIRCYGTHGLAQEALALFRQLVGAGLRPD 321
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
V FL +L AC+HAG++E G+ F+ ME +G+ HY + D+L RAG L++A FI
Sbjct: 322 GVVFLCLLSACSHAGLLEQGWHLFNAME-TYGVAKSEAHYACIVDLLGRAGDLEKAVEFI 380
Query: 391 MNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVG 450
+MP QP + ALL A IH + E +L L+P + VI+A Y +
Sbjct: 381 QSMPIQPGKNIYGALLGACRIHKNMELAELAAE---KLFVLDPDNAGRYVILAQMYEDAE 437
Query: 451 MWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
W+ + VR+ +K+ +KK G S VEL +F ++ V I+QIL +L+
Sbjct: 438 RWQDAARVRKVVKDKEIKKPIGYSSVELESGHQKFGVNDETHVHTTQIFQILHSLD 493
>gi|115440653|ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group]
gi|20161481|dbj|BAB90405.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|56785052|dbj|BAD82691.1| PPR repeat containing protein-like [Oryza sativa Japonica Group]
gi|113534137|dbj|BAF06520.1| Os01g0814300 [Oryza sativa Japonica Group]
Length = 604
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 161/436 (36%), Positives = 241/436 (55%), Gaps = 18/436 (4%)
Query: 79 TYARSILCNYVNDSVPIP----WNNLIRGYAWSDRPR---EAVWVFIDMKRRGIK-PTEF 130
+YAR++ D +P P +N+LIR + + + V V+ M R G P F
Sbjct: 78 SYARNLF-----DQIPEPTAFCYNSLIRALSSAAGAAPAADTVLVYRRMLRAGSPLPNSF 132
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
T F LKAC+ + L EG Q+ + + GL+ Y L+ Y C A VFD M
Sbjct: 133 TLAFALKACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGM 192
Query: 191 C-ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
++++ +W+ +I + EA+G F +M+ PDE TM+ V+SAC + G L LG
Sbjct: 193 VGDKNLAAWSAMIGGYSRVGMVNEALGLFREMQAADVNPDEVTMVSVISACAKAGALDLG 252
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
+WVH + +G ++ +L TALIDMYAKCG + A+ +F M E + WSAMI+GLA H
Sbjct: 253 RWVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAMAERDTKAWSAMIVGLAIH 312
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIH 369
G E AL+LFS M + PN VTF+GVL AC H+G+V +G RY+ M+ + GIKP +
Sbjct: 313 GLVEVALKLFSRMLELKVRPNNVTFIGVLSACAHSGLVNEGRRYWSTMQEL-GIKPSMEN 371
Query: 370 YHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLL 429
Y M D+ R+ L EAY+F+ M PN ++ R LL AS + + + ++LL
Sbjct: 372 YGCMVDLFCRSSLLDEAYSFVTGMAIPPNSVIWRTLLVASKNSN---RFDIVQSASKKLL 428
Query: 430 ELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGY 489
ELEP +N V+++N YA W++VS +R+ MK + + G S +E+ G +H+F
Sbjct: 429 ELEPCNPENYVLLSNLYASNSQWDRVSYMRKKMKENNVNVVAGCSSIEINGYLHKFVVSD 488
Query: 490 DSQVELAGIYQILETL 505
DS E+ I +L +
Sbjct: 489 DSHPEIKEIRLLLREI 504
>gi|357517875|ref|XP_003629226.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523248|gb|AET03702.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 510
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 162/478 (33%), Positives = 251/478 (52%), Gaps = 9/478 (1%)
Query: 35 LKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP 94
L C + + Q HAQI + G + D I +L+ + N+ +AR + + V
Sbjct: 27 LHHCKTIDRIKQTHAQIIIGGHKQDPFIAAKLIDKYSQLGGTNVEHARKVFDDLSERDV- 85
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
WNN+I+GYA EA+ V+ M+ G P +TYPFVLKAC +G + N
Sbjct: 86 FCWNNVIKGYANMGPFAEALHVYNAMRLSGAAPNRYTYPFVLKACGAERDCLKGRIIHGN 145
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V K GL+ D++ N V FY C+ + KVFD+M ER +VSWN +++ + N ++ EA
Sbjct: 146 VVKCGLEFDLFVGNAFVAFYAKCKEIEASRKVFDEMLERDIVSWNSMMSGYIANGYVDEA 205
Query: 215 VGYFVKM---KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
V F M +GF PD T++ VL A E ++ G W+H +++ G L+ +G L
Sbjct: 206 VMLFCDMLRDDGIGF-PDNATLVTVLPAFAEKADIHAGYWIHCYIVKTGMKLDPAVGCGL 264
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
I +Y+ CG + A+ +F ++ + NV WSA+I HG+A+EAL +F + + +
Sbjct: 265 ITLYSNCGYIRMAKAVFDQIPDRNVIVWSAIIRCYGMHGFAQEALSMFRQLVELGLHLDG 324
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
+ FL +L AC+HAGM E+G+ F ME +G+ HY M D+L RAG+L++A I
Sbjct: 325 IVFLSLLSACSHAGMHEEGWHLFQTME-TYGVVKGEAHYACMVDLLGRAGNLEKAMELIQ 383
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGM 451
+MP QP V ALL AS IH + E +L L+P + VI+A Y + G
Sbjct: 384 SMPIQPGKNVYGALLGASRIHKNIELAELAAE---KLFVLDPNNAGRYVILAQMYEDEGR 440
Query: 452 WEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
W+ + +R+ ++ +KK G S VEL +F ++ I++ L +L M
Sbjct: 441 WKDAARLRKIIREKEIKKPIGYSSVELESGHKKFGVNDETHPLTTEIFETLVSLGRTM 498
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 155/461 (33%), Positives = 240/461 (52%), Gaps = 6/461 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIH+ +G ++D + L+ S L AR +L + + + W ++I GY
Sbjct: 366 QIHSLSVKTGFESDMYVSGVLIDM--YSKYGWLEKARRVL-EMLKEKDVVSWTSMIAGYV 422
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ ++A+ F +M++ GI P + CA I+ + +G+Q+ A + SG DV
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVS 482
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N LV Y C R R+A F+++ + ++WN +++ ++ EA+ F++M G
Sbjct: 483 IWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSG 542
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+ + T + LSA L + GK +H ++I+ G ++G ALI +Y KCG+ A+
Sbjct: 543 VKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAK 602
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+ FS M E N +W+ +I +QHG EAL+LF MK I PN VTF+GVL AC+H G
Sbjct: 603 MEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVG 662
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+VE+G YF M +GI+P HY + DI RAG L A FI MP + +V R L
Sbjct: 663 LVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTL 722
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
LSA +H VG + LLELEP S + V+++N YA W VR+ M++
Sbjct: 723 LSACKVHK---NIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDR 779
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
G++K G SW+E+ +H F+ G IY L +N
Sbjct: 780 GVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVIN 820
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 155/345 (44%), Gaps = 32/345 (9%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFC-TLSSSKNLTYARSIL----------- 85
C +H +I ++Q SGL D + L+ C +L + T S L
Sbjct: 222 CGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIM 281
Query: 86 ----------CNYVNDSVPI----------PWNNLIRGYAWSDRPREAVWVFIDMKRRGI 125
C V ++ I WN ++ + + ++ +F M+ GI
Sbjct: 282 EGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGI 341
Query: 126 KPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACK 185
+P +FTYP +L+ C ++ G Q+ + K+G +SD+Y + L+ Y A +
Sbjct: 342 RPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARR 401
Query: 186 VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGN 245
V + + E+ VVSW +I V++ +A+ F +M+ G PD + +S C +
Sbjct: 402 VLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINA 461
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
+ G +H ++ G + + AL+++YA+CG + A F +E + TW+ ++ G
Sbjct: 462 MRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSG 521
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
AQ G EEAL++F M S + N TF+ L A + ++ G
Sbjct: 522 FAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQG 566
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 188/415 (45%), Gaps = 15/415 (3%)
Query: 32 LSFLKLCCSKKHLYQ----IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
LS + C+K L+ IHAQ G ++ + ++ S L A + C+
Sbjct: 146 LSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRL--AERVFCD 203
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+ + +N LI G+A A+ +F +M+ G+ P T +L ACA + L +
Sbjct: 204 MPHRDT-VTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G Q+ + + K+G+ SD +L+ Y C A +F+ +VV WN+++ +
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
L ++ F +M+ G P++ T +L CT + LG+ +H ++ G + +
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYV 382
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
LIDMY+K G + AR + ++E +V +W++MI G QH ++AL F M+ I
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
P+ + + C + G + H +V G ++ + ++ AR G ++EA+
Sbjct: 443 WPDNIGLASAISGCAGINAMRQGLQ-IHARIYVSGYSGDVSIWNALVNLYARCGRIREAF 501
Query: 388 TFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIV 442
+ + + + I L+S + Q G+ E + + ++ G ++ V
Sbjct: 502 SSFEEIEHK-DEITWNGLVSGFA------QSGLHEEALKVFMRMDQSGVKHNVFT 549
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 124/248 (50%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W ++ GYA + EA+ ++ M R G+ PT + VL +C + +G + A
Sbjct: 109 VSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQ 168
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K G S+++ N ++ Y C R A +VF DM R V++N +I+ + A
Sbjct: 169 GYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHA 228
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M+ G PD T+ +L+AC LG+L G +H L + G + + +L+D+
Sbjct: 229 LEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDL 288
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y KCG V A ++F+ + NV W+ M++ Q ++ ELF M+ + I PN T+
Sbjct: 289 YVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTY 348
Query: 335 LGVLCACN 342
+L C
Sbjct: 349 PCILRTCT 356
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 144/314 (45%), Gaps = 13/314 (4%)
Query: 101 IRGYAWSDRPREAVWVFIDMKRR--GIKPTEFTYPFVLKACAEISGLNEGMQV----QAN 154
+ G+ + P + + +F D R+ G+ P +F L+AC G QV A
Sbjct: 13 LAGFLAHEDPAKVLSLFADKARQHGGLGPLDFA--CALRAC---RGNGRRWQVVPEIHAK 67
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
GL N L+ Y A +VF+++ R VSW +++ +N EA
Sbjct: 68 AVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEA 127
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+G + +M G P + VLS+CT+ + G+ +H Q + G +G A+I +
Sbjct: 128 LGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITL 187
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y +CG+ A +F M + T++ +I G AQ G+ E ALE+F M+ S +SP+ VT
Sbjct: 188 YLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTI 247
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+L AC G ++ G + H GI I ++ D+ + G ++ A I N
Sbjct: 248 SSLLAACASLGDLQKGTQ-LHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV-IFNSS 305
Query: 395 FQPNPIVLRALLSA 408
+ N ++ +L A
Sbjct: 306 DRTNVVLWNLMLVA 319
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 146/417 (35%), Positives = 230/417 (55%), Gaps = 3/417 (0%)
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
P+ WN +I ++ + + F M R ++P EFTY VLKACA + GM+V
Sbjct: 425 PVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHG 484
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+ KSG+ ++ + LV Y C +A K+ + E+++VSWN II+ +
Sbjct: 485 RIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSED 544
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
+ +F M ++G EPD T VL C L + LGK +H Q+I+ + + + + L+D
Sbjct: 545 SQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVD 604
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MY+KCG + + L+F + + + TW+AMI G A HG EEALELF +M + +I PN+ T
Sbjct: 605 MYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHAT 664
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
F+ VL AC+H G + G YF +M ++ ++P HY M DIL R+G ++EA I +M
Sbjct: 665 FVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDM 724
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
PF+ + I+ R LLS I V + LL+L+P S +++N YA+ GMW+
Sbjct: 725 PFEADAIIWRTLLSICKIQG---NVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQ 781
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+VS +R+ M++ LKK G SW+E+ +H F + + IY +L+ L M+
Sbjct: 782 QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMR 838
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 165/328 (50%), Gaps = 8/328 (2%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
+N +I GYA +++ +A +F+ +++ E + L A A I G +EG+Q+
Sbjct: 327 YNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAI 386
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
KS L S++ N ++ YG C +A +FD+M R VSWN IIT C +N G+ +
Sbjct: 387 KSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLS 446
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
+F M EPDE T VL AC S G VH ++I+ G L +G+AL+DMY+
Sbjct: 447 HFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYS 506
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KCG + A + R+EE + +W+A+I G + +E++ FS+M + P+ T+
Sbjct: 507 KCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYAT 566
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
VL C + V G + +M + + + I T+ D+ ++ G++ ++ P +
Sbjct: 567 VLDTCANLATVGLGKQIHAQMIKLELLSDVYI-TSTLVDMYSKCGNMHDSLLMFRKAP-K 624
Query: 397 PNPIVLRALLSASSIHDAKYQDGVGNEV 424
+ + A++ + H G+G E
Sbjct: 625 RDSVTWNAMICGFAYH------GLGEEA 646
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 176/371 (47%), Gaps = 8/371 (2%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW 97
CC+ ++ Y++ ++ Q D +V C + + + A+++ + + + W
Sbjct: 72 CCALEYAYKVFEEMP----QRDIVSWNTMVFGC--AGAGRMELAQAVFNSMPHHGDVVSW 125
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N+LI GY + ++++ VF+ M+ G+ T LK C+ + G+Q+ +
Sbjct: 126 NSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQ 185
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
G D DV T + LV Y C D+ VF ++ +++ +SW+ I CV+N L +
Sbjct: 186 MGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKL 245
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
F +M+ G ++T V +C L LG +H ++ + +GTA +DMYAK
Sbjct: 246 FKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAK 305
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
C + A LFS + + N+ +++AMI+G A++ +A +LF ++ +S S + V+ G
Sbjct: 306 CDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGA 365
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
L A +G + H + + + + D+ + G L EA M +
Sbjct: 366 LSAAAVIKGHSEGLQ-LHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIR- 423
Query: 398 NPIVLRALLSA 408
+P+ A+++A
Sbjct: 424 DPVSWNAIITA 434
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 131/287 (45%), Gaps = 17/287 (5%)
Query: 86 CNYVNDSVP----------IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFV 135
CN + DS+ I W+ I G +D+ + +F +M+R+GI ++ TY V
Sbjct: 205 CNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASV 264
Query: 136 LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSV 195
++CA +S G Q+ + K+ SDV + Y C DA K+F + + ++
Sbjct: 265 FRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNL 324
Query: 196 VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQ 255
S+N +I N +A F++++ F DE ++ LSA + S G +H
Sbjct: 325 QSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGL 384
Query: 256 LIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEA 315
I+ N + A++DMY KCGA+ A LF ME + +W+A+I Q+ +
Sbjct: 385 AIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKT 444
Query: 316 LELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
L F M S + P+ T+ VL AC G R F VHG
Sbjct: 445 LSHFGAMLRSKMEPDEFTYGSVLKACA-------GQRAFSNGMEVHG 484
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 134/301 (44%), Gaps = 43/301 (14%)
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
T+ + + C+ L G + A++ SG V+ N L++ Y C A KVF++M
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 191 CERSVVSWNVIITVC--------------------------------VENLWLGEAVGYF 218
+R +VSWN ++ C ++N + +++ F
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
+KM+DLG D TT+ V L C+ L + LG +H ++ G + G+AL+DMYAKC
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC 205
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
++ + +FS + + N +WSA I G Q+ L+LF M+ I + T+ V
Sbjct: 206 NSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVF 265
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKP-----MRIHYHTMADILARAGHLKEAYTFIMNM 393
+C G + H H +K + + T+ D+ A+ ++ +AY +
Sbjct: 266 RSCAGLSASRLGTQL-----HCHALKTDFGSDVIVGTATL-DMYAKCDNMSDAYKLFSLL 319
Query: 394 P 394
P
Sbjct: 320 P 320
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 16/280 (5%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILC 86
S LK C ++ ++H +I SG+ + LV C + + R
Sbjct: 465 SVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYR---- 520
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
+ + + WN +I G++ + ++ F M G++P FTY VL CA ++ +
Sbjct: 521 --LEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVG 578
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G Q+ A + K L SDVY + LV Y C D+ +F +R V+WN +I
Sbjct: 579 LGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFA 638
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+ EA+ F M +P+ T + VL AC+ +GN G + + Q + L Q
Sbjct: 639 YHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLF-YFQKMASIYALEPQ 697
Query: 267 LG--TALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMI 303
L + ++D+ + G V A L M E + W ++
Sbjct: 698 LEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLL 737
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 175/512 (34%), Positives = 266/512 (51%), Gaps = 24/512 (4%)
Query: 13 FPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTL 72
PP + ++ R +S L+ C + I+A+I + D ++ EL+R C
Sbjct: 17 LPPNSGTKPKNTPNRRRHFISLLQNCKHNNQIPPIYAKIIRNHHHQDPFVVFELLRVC-- 74
Query: 73 SSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
S+ ++ YA I + N +V + + LI G S + + ++ M + P +
Sbjct: 75 SNLNSIGYASKIFSHTQNPNVYL-YTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAV 133
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
VLKAC L EG +V + V K GL S+ L+ YG C DA +VFD+M E
Sbjct: 134 TSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPE 193
Query: 193 RSVVSWNVII----------TVC--------VENLWLGEAVGYFVKMKDLGFEPDETTML 234
R VV+ V+I TVC V N A+ F M+ P+E T++
Sbjct: 194 RDVVASTVMINYYFDHGIKDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIV 253
Query: 235 VVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI 294
VLSAC+ELG L LG+WV + + LN +G ALI+MY++CG + A+ +F +M+E
Sbjct: 254 CVLSACSELGALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEK 313
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYF 354
NV T+++MI+G A HG + EA+ELF + +P+ VTF+GVL AC+H G+ E G+ F
Sbjct: 314 NVITYNSMIMGFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIF 373
Query: 355 HEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDA 414
H M +GI+P HY M D+L R G L+EAY+FI M P+ ++L ALLSA IH
Sbjct: 374 HSMAKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIRMMKVAPDHVMLGALLSACKIHG- 432
Query: 415 KYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMS 474
+ V + L+ + S ++++N Y+ G W++ + VR M+ G++K G S
Sbjct: 433 --NLELAERVAKSLVACKNADSGTYILLSNAYSSSGKWKEAAEVRTNMREEGIEKEPGCS 490
Query: 475 WVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
+E+ IH F G + IY+ LE LN
Sbjct: 491 SIEVNNEIHEFLLGDLRHPQKEKIYKKLEELN 522
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 175/506 (34%), Positives = 264/506 (52%), Gaps = 46/506 (9%)
Query: 33 SFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDS 92
SF+ L K L QIH Q+ ++GL N+ ++L + V + + NL Y+ IL +
Sbjct: 18 SFITL----KELKQIHTQLVINGLLNNRELLGQFVASIAVRNPTNLLYSNQILDQCAKPT 73
Query: 93 VPIPWNNLIRGYAWSDRPREAVWVF--IDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
+ N++IR Y+ S P ++ + I + P +T+ F+++ CA+ S G
Sbjct: 74 L-FALNSMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTCAQ-SACEAGPA 131
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYG------SCRR------KRD---------AC----- 184
V + K G + D + + L+ Y SC R K D AC
Sbjct: 132 VHGALIKHGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVCQTTMVSACAKCGD 191
Query: 185 -----KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
+FD M +R VSWN +I + EA+ F M+ G + +E +M+ V++A
Sbjct: 192 IGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKVNEVSMISVVTA 251
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
CT LG L GKW H + + + LGTAL+DMY KCG V A +F M E NV+TW
Sbjct: 252 CTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEMNEKNVYTW 311
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
S I GLA +GY ++ LELFS MK+ I+PN +TF+ VL C+ G V++G +F M+
Sbjct: 312 STAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKR 371
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
HGI+P HY M D+ RAG L+EA FI MP +P+ ALL+A ++
Sbjct: 372 DHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNME--- 428
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
+G R+L+E+E + V ++N YA+ G W++VSNVR+ MK G+ K+ G S +E+
Sbjct: 429 LGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEGISKLPGCSVMEVN 488
Query: 480 GSIHRFYSGYDSQVELAGIYQILETL 505
G +H F+SG S Y ++ET+
Sbjct: 489 GEVHEFFSGDKSHPS----YDVIETM 510
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 172/521 (33%), Positives = 257/521 (49%), Gaps = 47/521 (9%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LS + C + + + Q+HA + + N + L+ + +L YARSI + +
Sbjct: 20 LSLFQTCSAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIF-DRIQR 78
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
I WN +I+ Y + + + +F ++ + P FT P V+K CA + + EG Q+
Sbjct: 79 RSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQI 137
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT-------- 203
K G SDV+ +LV Y C A KVFD M ++ VV WN +I
Sbjct: 138 HGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNA 197
Query: 204 -------------------------VCVENLWLG---------EAVGYFVKMKDLGFEPD 229
+ NL + +AV F M LG P
Sbjct: 198 MINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPS 257
Query: 230 ETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFS 289
T++ VLSA + L L G+W+H + + G L+ LGT+LI+MYAKCG + A +F
Sbjct: 258 HATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFR 317
Query: 290 RMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVED 349
+++ V W+A+I+GL HG A AL LF M + + PN + F+GVL ACNHAG+V+D
Sbjct: 318 AIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDD 377
Query: 350 GYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSAS 409
G +YF M + + I+P HY + DIL RAGHL+EA I NMP PN ++ +LL S
Sbjct: 378 GRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGS 437
Query: 410 SIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKK 469
H + +G +R++E+ P ++++N YA GMWEKVS+VR M G +K
Sbjct: 438 RNHG---KIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRK 494
Query: 470 MKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
G S VE G++H F G S + IY + + +K
Sbjct: 495 DPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLK 535
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 151/417 (36%), Positives = 227/417 (54%), Gaps = 6/417 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +LI YA EA+ +F +M R G+ P FT VL ACA L G V
Sbjct: 65 VTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNY 124
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ ++ + S+++ N L+ Y C DA VF +M + ++SWN +I +N EA
Sbjct: 125 IRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEA 184
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F M L +PD TT+ +L AC L +L GK VH ++ G + Q+ AL+DM
Sbjct: 185 LSLFGDMV-LEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDM 243
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y KCG ARLLF + ++ TW+ MI G HG+ A+ F+ M+ + I P+ V+F
Sbjct: 244 YVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSF 303
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ +L AC+H+G++++G+R+F+ M+ +KP HY + D+LAR+G L AY FI +MP
Sbjct: 304 ISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMP 363
Query: 395 FQPNPIVLRALLSASSI-HDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
+P+ + ALLS I HD K + V V ELEP + V++AN YAE WE
Sbjct: 364 IEPDATIWGALLSGCRIHHDVKLAEKVAEHV----FELEPENTGYYVLLANTYAEAEKWE 419
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+V +R+ + GLKK G SW+E+ +H F +G S + I +L+ L MK
Sbjct: 420 EVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMK 476
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 107/228 (46%), Gaps = 8/228 (3%)
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
+L+ACA ++ G V + K+ + N L+ Y C A VFD M R+
Sbjct: 4 ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRT 63
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHL 254
VV+W +I EA+ F +M G PD T+ VL AC G+L GK VH
Sbjct: 64 VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHN 123
Query: 255 QLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEE 314
+ E N + AL+DMYAKCG++ A +F M ++ +W+ MI G +++ E
Sbjct: 124 YIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNE 183
Query: 315 ALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
AL LF +M + P+ T +L AC ++ G + VHG
Sbjct: 184 ALSLFGDMV-LEMKPDGTTLACILPACASLASLDRG-------KEVHG 223
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 105/208 (50%), Gaps = 12/208 (5%)
Query: 233 MLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME 292
M+ +L AC G++SLG+ VH ++ L+DMYAKCG + A L+F M
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 293 EINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR 352
V TW+++I A+ G ++EA+ LF M +SP+ T VL AC G +E+G +
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENG-K 119
Query: 353 YFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
H + ++ + + D+ A+ G +++A + + MP ++ ++S +++
Sbjct: 120 DVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMP-------VKDIISWNTMI 172
Query: 413 DAKYQDGVGNEVRR----RLLELEPRGS 436
++ + NE +LE++P G+
Sbjct: 173 GGYSKNSLPNEALSLFGDMVLEMKPDGT 200
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 171/503 (33%), Positives = 251/503 (49%), Gaps = 44/503 (8%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+H+ I S +D I LV S N+ A+ + + + D + WN+LI +
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDM--YSKCGNVNDAQRVF-DEMGDRNVVSWNSLITCFE 229
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG-LDSDV 164
+ EA+ VF M ++P E T V+ ACA +S + G +V V K+ L +D+
Sbjct: 230 QNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDI 289
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDM-------------------------------CER 193
+N V Y C R ++A +FD M ER
Sbjct: 290 ILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAER 349
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
+VVSWN +I +N EA+ F +K P + +L AC +L L LG H
Sbjct: 350 NVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAH 409
Query: 254 LQLIERGTVLNCQ------LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA 307
+ +++ G +G +LIDMY KCG V L+F +M E + +W+AMI+G A
Sbjct: 410 VHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFA 469
Query: 308 QHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
Q+GY EALELF M S P+++T +GVL AC HAG VE+G YF M G+ P+R
Sbjct: 470 QNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLR 529
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRR 427
HY M D+L RAG L+EA + I MP QP+ ++ +LL+A +H +G V +
Sbjct: 530 DHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH---RNITLGKYVAEK 586
Query: 428 LLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYS 487
LLE+EP S V+++N YAE+G WE V NVR+ M+ G+ K G SW+++ G H F
Sbjct: 587 LLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMV 646
Query: 488 GYDSQVELAGIYQILETLNLHMK 510
S I+ +L+ L M+
Sbjct: 647 KDKSHPRKKQIHSLLDILIAEMR 669
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 185/378 (48%), Gaps = 44/378 (11%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN+++ G+A DR EA+ F M + G E+++ VL AC+ ++ +N+G+QV + +
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
KS SDVY + LV Y C DA +VFD+M +R+VVSWN +IT +N EA+
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN-CQLGTALIDMY 275
F M + EPDE T+ V+SAC L + +G+ VH ++++ + N L A +DMY
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 276 AKC-------------------------------GAVGCARLLFSRMEEINVWTWSAMIL 304
AKC + ARL+F++M E NV +W+A+I
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 305 GLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN-----HAGMVEDGYRYFHEMEH 359
G Q+G EEAL LF +K S+ P + +F +L AC H GM + H +
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 419
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
G + +++ D+ + G ++E Y M + R +S +++ Q+G
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-------MERDCVSWNAMIIGFAQNG 472
Query: 420 VGNEVRRRLLELEPRGSQ 437
GNE E+ G +
Sbjct: 473 YGNEALELFREMLESGEK 490
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 138/289 (47%), Gaps = 32/289 (11%)
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT------- 203
V A+V KSG ++++ N L+ Y C D +VFD M +R++ +WN ++T
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 204 ---------------VCVENLWLG---------EAVGYFVKMKDLGFEPDETTMLVVLSA 239
C N + EA+ YF M GF +E + VLSA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C+ L +++ G VH + + + + +G+AL+DMY+KCG V A+ +F M + NV +W
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+++I Q+G A EAL++F M S + P+ VT V+ AC ++ G +
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
++ I + D+ A+ +KEA +MP + N I +++S
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR-NVIAETSMISG 329
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 110/236 (46%), Gaps = 27/236 (11%)
Query: 214 AVGYFVKMK-DLGFEPDETTMLVVLSAC--TELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
A F+K+ DL D + +L +C ++L + + ++VH +I+ G +
Sbjct: 2 ATKSFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNR 60
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
LID Y+KCG++ R +F +M + N++TW++++ GL + G+ +EA LF +M +
Sbjct: 61 LIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPER----D 116
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE----- 385
T+ ++ E+ YF M H G ++ ++ A +L+ L +
Sbjct: 117 QCTWNSMVSGFAQHDRCEEALCYF-AMMHKEGFV---LNEYSFASVLSACSGLNDMNKGV 172
Query: 386 -AYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLV 440
++ I PF + + AL+ D + G N+ +R E+ G +N+V
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALV------DMYSKCGNVNDAQRVFDEM---GDRNVV 219
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 157/411 (38%), Positives = 219/411 (53%), Gaps = 3/411 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I WN LI G + R EA +F +++ G+ T VLK+ A + + QV A
Sbjct: 370 ILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHAL 429
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K G D + N L+ Y C DA +VF++ +++ +IT + A
Sbjct: 430 AEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGA 489
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F++M G EPD + +L+AC L GK VH LI+R + + G AL+
Sbjct: 490 IKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYT 549
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG++ A L FS + E V +WSAMI GLAQHG+ + ALELF M + I+PN++T
Sbjct: 550 YAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITM 609
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
VLCACNHAG+V++ RYF+ M+ + GI HY M D+L RAG L +A + +MP
Sbjct: 610 TSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMP 669
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
FQ N V ALL AS +H +G +L LEP S V++AN YA GMW +
Sbjct: 670 FQANASVWGALLGASRVHK---DPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNE 726
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
V+ VR+ MK+ +KK MSWVE+ +H F G S IY L+ L
Sbjct: 727 VAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDEL 777
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 157/311 (50%), Gaps = 10/311 (3%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+HA + SG A + L+ F S + AR + + + D + W++L+ Y+
Sbjct: 25 HLHANLLKSGFL--ASLRNHLISF--YSKCRRPCCARRVF-DEIPDPCHVSWSSLVTAYS 79
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ PR A+ F M+ G+ EF P VLK C + L G QV A +G SDV+
Sbjct: 80 NNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVPDAQL--GAQVHAMAMATGFGSDVF 136
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL 224
N LV YG DA +VFD+ ER+ VSWN +++ V+N G+A+ F +M
Sbjct: 137 VANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWS 196
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCA 284
G +P E V++ACT N+ G+ VH ++ G + AL+DMY K G V A
Sbjct: 197 GIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIA 256
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA 344
++F +M + +V +W+A+I G +G+ A+EL MK+S + PN +L AC A
Sbjct: 257 SVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGA 316
Query: 345 GMVEDGYRYFH 355
G + G R H
Sbjct: 317 GAFDLG-RQIH 326
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 183/418 (43%), Gaps = 38/418 (9%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HA +G +D + LV + AR + ++ + WN L+ Y
Sbjct: 121 QVHAMAMATGFGSDVFVANALV--AMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYV 178
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+D+ +A+ VF +M GI+PTEF + V+ AC ++ G QV A V + G + DV+
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVF 238
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
T N LV Y R A +F+ M + VVSWN +I+ CV N A+ ++MK G
Sbjct: 239 TANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSG 298
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
P+ + +L AC G LG+ +H +I+ + +G L+DMYAK + A
Sbjct: 299 LVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAM 358
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL------- 338
+F M ++ W+A+I G + G +EA +F ++ + N T VL
Sbjct: 359 KVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLE 418
Query: 339 --CACNHAGMVEDGYRYFHEMEHVHGI-----------KPMR----------IHYHTMAD 375
A + + + + V+G+ +R I +M
Sbjct: 419 AASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMIT 478
Query: 376 ILARAGHLKEAYTFIMNM---PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLE 430
L++ H + A M M +P+P VL +LL+A + A Q G +V L++
Sbjct: 479 ALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ---GKQVHAHLIK 533
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 164/393 (41%), Gaps = 23/393 (5%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HA + G + D LV ++ S++ + DS + WN LI G
Sbjct: 223 QVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIA---SVIFEKMPDSDVVSWNALISGCV 279
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ A+ + + MK G+ P F +LKACA + G Q+ + K+ DSD Y
Sbjct: 280 LNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDY 339
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
LV Y DA KVFD M R ++ WN +I+ C EA F ++ G
Sbjct: 340 IGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEG 399
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+ TT+ VL + L S + VH + G + + + LID Y KC + A
Sbjct: 400 LGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAI 459
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F ++ ++MI L+Q + E A++LF M + P+ +L AC
Sbjct: 460 RVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 519
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL----ARAGHLKEAYTFIMNMPFQPNPIV 401
E G + H H IK + + L A+ G +++A ++P
Sbjct: 520 AYEQGKQV-----HAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP------- 567
Query: 402 LRALLSASSIHDAKYQDGVGNEVRRRLLELEPR 434
R ++S S++ Q G G +R LEL R
Sbjct: 568 ERGVVSWSAMIGGLAQHGHG----KRALELFGR 596
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 155/461 (33%), Positives = 240/461 (52%), Gaps = 6/461 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIH+ +G ++D + L+ S L AR +L + + + W ++I GY
Sbjct: 366 QIHSLSVKTGFESDMYVSGVLIDM--YSKYGWLEKARRVL-EMLKEKDVVSWTSMIAGYV 422
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ ++A+ F +M++ GI P + CA I+ + +G+Q+ A + SG DV
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVS 482
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N LV Y C R R+A F+++ + ++WN +++ ++ EA+ F++M G
Sbjct: 483 IWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSG 542
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+ + T + LSA L + GK +H ++I+ G ++G ALI +Y KCG+ A+
Sbjct: 543 VKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAK 602
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+ FS M E N +W+ +I +QHG EAL+LF MK I PN VTF+GVL AC+H G
Sbjct: 603 MEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVG 662
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+VE+G YF M +GI+P HY + DI RAG L A FI MP + +V R L
Sbjct: 663 LVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTL 722
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
LSA +H VG + LLELEP S + V+++N YA W VR+ M++
Sbjct: 723 LSACKVHK---NIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDR 779
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
G++K G SW+E+ +H F+ G IY L +N
Sbjct: 780 GVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVIN 820
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 155/345 (44%), Gaps = 32/345 (9%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFC-TLSSSKNLTYARSIL----------- 85
C +H +I ++Q SGL D + L+ C +L + T S L
Sbjct: 222 CGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIM 281
Query: 86 ----------CNYVNDSVPI----------PWNNLIRGYAWSDRPREAVWVFIDMKRRGI 125
C V ++ I WN ++ + + ++ +F M+ GI
Sbjct: 282 EGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGI 341
Query: 126 KPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACK 185
+P +FTYP +L+ C ++ G Q+ + K+G +SD+Y + L+ Y A +
Sbjct: 342 RPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARR 401
Query: 186 VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGN 245
V + + E+ VVSW +I V++ +A+ F +M+ G PD + +S C +
Sbjct: 402 VLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINA 461
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
+ G +H ++ G + + AL+++YA+CG + A F +E + TW+ ++ G
Sbjct: 462 MRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSG 521
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
AQ G EEAL++F M S + N TF+ L A + ++ G
Sbjct: 522 FAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQG 566
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 188/415 (45%), Gaps = 15/415 (3%)
Query: 32 LSFLKLCCSKKHLYQ----IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
LS + C+K L+ IHAQ G ++ + ++ S L A + C+
Sbjct: 146 LSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRL--AERVFCD 203
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+ + +N LI G+A A+ +F +M+ G+ P T +L ACA + L +
Sbjct: 204 MPHRDT-VTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G Q+ + + K+G+ SD +L+ Y C A +F+ +VV WN+++ +
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
L ++ F +M+ G P++ T +L CT + LG+ +H ++ G + +
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYV 382
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
LIDMY+K G + AR + ++E +V +W++MI G QH ++AL F M+ I
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
P+ + + C + G + H +V G ++ + ++ AR G ++EA+
Sbjct: 443 WPDNIGLASAISGCAGINAMRQGLQ-IHARIYVSGYSGDVSIWNALVNLYARCGRIREAF 501
Query: 388 TFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIV 442
+ + + + I L+S + Q G+ E + + ++ G ++ V
Sbjct: 502 SSFEEIEHK-DEITWNGLVSGFA------QSGLHEEALKVFMRMDQSGVKHNVFT 549
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 124/248 (50%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W ++ GYA + EA+ ++ M R G+ PT + VL +C + +G + A
Sbjct: 109 VSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQ 168
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K G S+++ N ++ Y C R A +VF DM R V++N +I+ + A
Sbjct: 169 GYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHA 228
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M+ G PD T+ +L+AC LG+L G +H L + G + + +L+D+
Sbjct: 229 LEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDL 288
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y KCG V A ++F+ + NV W+ M++ Q ++ ELF M+ + I PN T+
Sbjct: 289 YVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTY 348
Query: 335 LGVLCACN 342
+L C
Sbjct: 349 PCILRTCT 356
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 144/314 (45%), Gaps = 13/314 (4%)
Query: 101 IRGYAWSDRPREAVWVFIDMKRR--GIKPTEFTYPFVLKACAEISGLNEGMQV----QAN 154
+ G+ + P + + +F D R+ G+ P +F L+AC G QV A
Sbjct: 13 LAGFLAHEDPAKVLSLFADKARQHGGLGPLDFA--CALRAC---RGNGRRWQVVPEIHAK 67
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
GL N L+ Y A +VF+++ R VSW +++ +N EA
Sbjct: 68 AVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEA 127
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+G + +M G P + VLS+CT+ + G+ +H Q + G +G A+I +
Sbjct: 128 LGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITL 187
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y +CG+ A +F M + T++ +I G AQ G+ E ALE+F M+ S +SP+ VT
Sbjct: 188 YLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTI 247
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+L AC G ++ G + H GI I ++ D+ + G ++ A I N
Sbjct: 248 SSLLAACASLGDLQKGTQ-LHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV-IFNSS 305
Query: 395 FQPNPIVLRALLSA 408
+ N ++ +L A
Sbjct: 306 DRTNVVLWNLMLVA 319
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 171/496 (34%), Positives = 253/496 (51%), Gaps = 35/496 (7%)
Query: 42 KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNL----------------------- 78
+H ++ Q++ SGL + L +++ C S + NL
Sbjct: 285 QHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGL 344
Query: 79 --TYARSILCN---YVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTE 129
YA+ L + V D +P + WN LI G + + EA+ +F M++ G
Sbjct: 345 VDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNR 404
Query: 130 FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD 189
T VLK+ A + +++ QV A K G SD + N L+ Y C A +VF+
Sbjct: 405 TTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEK 464
Query: 190 MCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
++++ +IT + +A+ F++M G +PD + +L+AC L G
Sbjct: 465 HGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQG 524
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
K VH LI+R + + G AL+ YAKCG++ A L FS + E V +WSAMI GLAQH
Sbjct: 525 KQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQH 584
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIH 369
G+ + AL++F M + ISPN++T VLCACNHAG+V++ RYF+ M+ + GI+ H
Sbjct: 585 GHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEH 644
Query: 370 YHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLL 429
Y M D+L RAG L +A + +MPFQ N V ALL+AS +H +G +L
Sbjct: 645 YACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVH---RDPELGRLAAEKLF 701
Query: 430 ELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGY 489
LEP S V++AN YA GMW+ V+ VR+ MK+ +KK MSWVEL +H F G
Sbjct: 702 ILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGD 761
Query: 490 DSQVELAGIYQILETL 505
S IY L+ L
Sbjct: 762 KSHPRARDIYAKLDEL 777
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 122/386 (31%), Positives = 191/386 (49%), Gaps = 18/386 (4%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILCNYVNDSVPIPWNNLIR 102
IHA + SGL A L+ F C L S AR + + + D + W++L+
Sbjct: 25 HIHAHLLKSGLF--AVFRNHLLSFYSKCRLPGS-----ARRVF-DEIPDPCHVSWSSLVT 76
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
Y+ + PR+A+ F M+ ++ EF P VLK CA +G G Q+ A +GL
Sbjct: 77 AYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CAPDAGF--GTQLHALAMATGLGG 133
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
D++ N LV YG +A VFD+ CER+ VSWN +++ V+N AV F +M
Sbjct: 134 DIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEM 193
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
G +P+E V++ACT +L G+ VH +I G + AL+DMY+K G +
Sbjct: 194 VWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDI 253
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
A ++F ++ E +V +W+A I G HG+ + ALEL MK+S + PN T +L AC
Sbjct: 254 RMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKAC 313
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIV 401
+G G + M + I + + D+ A+ G L +A +P Q + ++
Sbjct: 314 AGSGAFNLGRQIHGFMVKANADSDNYIAF-GLVDMYAKHGLLDDAKKVFDWIP-QRDLVL 371
Query: 402 LRALLSASSIHDAKYQDGVGNEVRRR 427
AL+S S H A++ + + R R
Sbjct: 372 WNALISGCS-HGAQHAEALSLFCRMR 396
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 205/481 (42%), Gaps = 52/481 (10%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HA +GL D + LV + AR + + + WN L+ Y
Sbjct: 121 QLHALAMATGLGGDIFVANALV--AMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYV 178
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+DR AV VF +M G++P EF + V+ AC L G +V A V ++G D DV+
Sbjct: 179 KNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVF 238
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
T N LV Y R A VF + E VVSWN I+ CV + A+ ++MK G
Sbjct: 239 TANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSG 298
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
P+ T+ +L AC G +LG+ +H +++ + + L+DMYAK G + A+
Sbjct: 299 LVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAK 358
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN--- 342
+F + + ++ W+A+I G + EAL LF M+ N T VL +
Sbjct: 359 KVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLE 418
Query: 343 --------HA---------------GMVE-----DGYRYFHEMEHVHGIKPMRIHYHTMA 374
HA G+++ D Y + + HG + I + +M
Sbjct: 419 AISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDI-IAFTSMI 477
Query: 375 DILARAGHLKEAYTFIMNM---PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLEL 431
L++ H ++A M M P+P VL +LL+A + A Q G +V L++
Sbjct: 478 TALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQ---GKQVHAHLIK- 533
Query: 432 EPRGSQNLVIVAN----KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYS 487
R + V N YA+ G E + GL + +SW + G + +
Sbjct: 534 --RQFMSDVFAGNALVYTYAKCGSIEDAD-----LAFSGLPEKGVVSWSAMIGGLAQHGH 586
Query: 488 G 488
G
Sbjct: 587 G 587
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 145/411 (35%), Positives = 230/411 (55%), Gaps = 3/411 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I G A + E + + +M +KP FT VL AE +++G ++
Sbjct: 266 VSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGC 325
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ GLD++VY ++L+ Y C R D+ +VF + ER +SWN II CV+N E
Sbjct: 326 SIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEG 385
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ +F +M +P + ++ AC L L LGK +H + G N + ++L+DM
Sbjct: 386 LKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDM 445
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG + AR +F RM ++ +W+AMI+G A HG+A +A+ELF MK I PNYV F
Sbjct: 446 YAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAF 505
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ VL AC+HAG+V++ ++YF+ M GI P HY ++D+L RAG L+EAY FI MP
Sbjct: 506 MAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMP 565
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
P V LLSA +H K D + +V R+LE++P+ + +++AN Y+ W++
Sbjct: 566 IGPTGSVWATLLSACRVH--KNVD-MAEKVANRILEVDPKNTGAYILLANIYSAARRWKE 622
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+ R ++ G++K SW+E+ ++ F +G +S I + +E L
Sbjct: 623 AAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVL 673
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 1/202 (0%)
Query: 185 KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELG 244
K+F+ M E+ +VSWN II N GE + +M +PD T+ VL E
Sbjct: 255 KIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENV 314
Query: 245 NLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMIL 304
++S GK +H I +G + ++LIDMYAKC V + +F+ + E + +W+++I
Sbjct: 315 DISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIA 374
Query: 305 GLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIK 364
G Q+G +E L+ F M + I P +F ++ AC H + G + H +G
Sbjct: 375 GCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLG-KQLHGYITRNGFD 433
Query: 365 PMRIHYHTMADILARAGHLKEA 386
++ D+ A+ G+++ A
Sbjct: 434 ENIFIASSLVDMYAKCGNIRTA 455
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 138/308 (44%), Gaps = 32/308 (10%)
Query: 40 SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNN 99
S+ Q+HAQ+ L+ A L L ++ S NL + L N ++ + W +
Sbjct: 23 SRSQAQQLHAQV----LKFQASSLCNLSLLLSIYSHINLLHDSLRLFNTLHFPPALAWKS 78
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
+IR Y P +++ FI M G+ P +P VLKACA + LN G + + + G
Sbjct: 79 VIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYIIRVG 138
Query: 160 LDSDVYTNNNLVRFYG-------SCRRKRDACKVFDDMCE--RSVVSWNVIITVCVENLW 210
LD D+YT N L+ Y S R++ A +V D+M E RSV + +V++ +
Sbjct: 139 LDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVLVGNQGRKVS 198
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
EA Y V + FE + E+ ++ ++ C LG
Sbjct: 199 DIEAFNYDVSCRSREFE----------AQVLEIDYKPRSEYREMEA--------CNLGQQ 240
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
+ D+ + +V R +F M E ++ +W+ +I G A++G E L + M +++ P+
Sbjct: 241 IKDI-SHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPD 299
Query: 331 YVTFLGVL 338
T VL
Sbjct: 300 SFTLSSVL 307
>gi|224099171|ref|XP_002311390.1| predicted protein [Populus trichocarpa]
gi|222851210|gb|EEE88757.1| predicted protein [Populus trichocarpa]
Length = 594
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 180/570 (31%), Positives = 282/570 (49%), Gaps = 82/570 (14%)
Query: 14 PPKPSNCNSDL---LSKARQCLSFLKLCCSKKHLYQIHAQ-IQVSGLQNDAQILKELVRF 69
P K + NS L K +S L+ C + K L Q+H I+ S ++ + L+ F
Sbjct: 14 PSKTTALNSQQKQHLRKPDHAISLLQNCKNPKDLIQLHTLLIKTSLIKEKYAFGRLLLSF 73
Query: 70 CTLSSSKNLTYARSILCNYVNDSVPIPWNN-----LIRGYAWSDRPREAVWVFIDM--KR 122
+ + +L YA+ + D+V IP N+ +I+ YA PREA + M +
Sbjct: 74 ASFDNLGSLNYAQKLF-----DTVDIPRNSFMYTTMIKAYANFGNPREAFAFYSRMLCDQ 128
Query: 123 RGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSC----- 177
R + P +FT+ +V AC++ +G+ EG Q A + K + V++ N+L+ FYG
Sbjct: 129 RYVYPNDFTFTYVFSACSKFNGVFEGKQAHAQMIKFPFEFGVHSWNSLLDFYGKVGEVGI 188
Query: 178 --RRKRD-------------------------ACKVFDDMCERSVVSWNVIITVCVENLW 210
RR D A ++FD+M ER VVSW +++ + +
Sbjct: 189 VVRRVFDKIEGPDVVSWNCLINGYVKSGDLDEARRLFDEMPERDVVSWTIMLVGYADAGF 248
Query: 211 LGEAV-------------------GY------------FVKMKDLGFEPDETTMLVVLSA 239
L EA GY F +M+ + DE + +LSA
Sbjct: 249 LSEASCLFDEMPKRNLVSWSALIKGYIQIGCYSKALELFKEMQVAKVKMDEVIVTTLLSA 308
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C LG L G+W+H+ + + G ++ L TALIDMY+KCG + A +F + V+ W
Sbjct: 309 CARLGALDQGRWLHMYIDKHGIKVDAHLSTALIDMYSKCGRIDMAWKVFQETGDKKVFVW 368
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
S+MI GLA H + E+A+ELF+ M I P+ +T++ +L AC H+G+V+ G + F+ M
Sbjct: 369 SSMIGGLAMHSFGEKAIELFAKMIECGIEPSEITYINILAACTHSGLVDVGLQIFNRMVE 428
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
KP HY + D+L RAG L +A+ + MP + +P + RALLSA +H
Sbjct: 429 NQKPKPRMQHYGCIVDLLGRAGLLHDAFRVVETMPVKADPAIWRALLSACKLHR---NVE 485
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
+G +V R L+++EP+ N V+ +N YA V W+ +RR MK G++K G S +EL
Sbjct: 486 LGEQVGRILIKMEPQNDMNYVLFSNVYAAVNRWDISGKLRREMKVRGMQKNPGCSSIELN 545
Query: 480 GSIHRFYSGYDSQVELAGIYQILETLNLHM 509
G++H F S S + IY++L L HM
Sbjct: 546 GAVHEFVSRDHSHPQSQVIYELLHILTNHM 575
>gi|296085795|emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 162/502 (32%), Positives = 268/502 (53%), Gaps = 37/502 (7%)
Query: 43 HLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIR 102
H+ QI + + VSG D ++ FC +S+ ++++A + + + I WN ++R
Sbjct: 3 HIKQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRTSFI-WNTMLR 61
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
+ P + ++ M G P +T+ F+L+ACA++S L+ G+ + A + G ++
Sbjct: 62 AFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEA 121
Query: 163 DVYTNNNLVRFYGSC------RRKRD-------------------------ACKVFDDMC 191
+ N L+ Y SC RR D A ++FD+M
Sbjct: 122 YDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMP 181
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
E++ VSW+ +IT + EA+ F M+ GF P+ ++ L+AC LG L G+W
Sbjct: 182 EKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRW 241
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+H + VL+ LGTALIDMYAKCG V A +F M + +V+ ++++I GLA HG+
Sbjct: 242 IHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHGH 301
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
+ A+E+F+ M+N + PN VTF+ +L AC+ G+VE+G R F M +++GI+P+ HY
Sbjct: 302 SATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYG 361
Query: 372 TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLE 430
+ D+L RAG L++A + MP +P+ VL ALL+A +H D + +G E L E
Sbjct: 362 CLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVE----LGKETVECLAE 417
Query: 431 LEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYD 490
V+++N YA WE V+ VR+ M+ +KK+ G S +E+ G++ F +G
Sbjct: 418 RSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGCSLIEVDGAVFEFVAGDM 477
Query: 491 SQVELAGIYQILETLNLHMKVL 512
S V + I +L ++ H+K L
Sbjct: 478 SHVFMDEIVLLLLGIDKHLKSL 499
>gi|449452160|ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Cucumis sativus]
Length = 532
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 174/516 (33%), Positives = 265/516 (51%), Gaps = 40/516 (7%)
Query: 26 SKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
S +++CL L C + L Q HAQ+ SGL N +L L+ FC S + +L++A +
Sbjct: 3 SSSKRCLLLLHKCINMNQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFKLF 62
Query: 86 CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL 145
+ + ++ I +N +I+ A+ VF + R GI P +T P+VLKA A ++ +
Sbjct: 63 QHIQHPTICI-FNTMIKALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMTNI 121
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII--- 202
+ G + A K G + + N+L+ Y S R A +VFD+M E S VSW V+I
Sbjct: 122 HLGESIHACTIKLGSAVNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGY 181
Query: 203 ----------------TVCVENLWLGEAVGY------------FVKMKDLGFEPDETTML 234
TV +W GY F M+ EPDE ++
Sbjct: 182 ANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIV 241
Query: 235 VVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI 294
+LSAC +G L G W+H L G L ++ T LIDMYAKCG + A+ LF+ M +
Sbjct: 242 TILSACAHMGALDTGIWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQR 301
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYF 354
+ W+AMI G+A G E A++LF M+ + I P+ +TF+ VL AC+++GMV++G R +
Sbjct: 302 DNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRIW 361
Query: 355 HEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP----IVLRALLSASS 410
+ M VH I+P HY + D+L+R G +EA I +P +P + RA LSA
Sbjct: 362 NRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSACC 421
Query: 411 IHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKM 470
H Q V E RL +LE R S V+++N YA +G E VR MK G++K+
Sbjct: 422 KHGQTQQAEVAAE---RLFQLE-RHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEKV 477
Query: 471 KGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
G S +++ G ++ F +G + + I+ +LE LN
Sbjct: 478 PGCSSIKVNGVVNEFIAGEKTHRHIDNIHLVLEELN 513
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 175/505 (34%), Positives = 258/505 (51%), Gaps = 26/505 (5%)
Query: 13 FPPKPSNCNSDLLSKARQCLSFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRF 69
FP PSN S L+ C S K L Q+HA++ G+ + + +LV F
Sbjct: 51 FPSSPSN--------HYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNF 102
Query: 70 CTLSSSKNLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGI 125
++ +S + ++ D +P WN LIR YAW+ A+ ++ M G+
Sbjct: 103 YSVCNSLRNAH-------HLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGL 155
Query: 126 KPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACK 185
KP FT PFVLKAC+ +S + EG + V +SG + DV+ LV Y C DA
Sbjct: 156 KPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARH 215
Query: 186 VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGN 245
VFD + +R V WN ++ +N E++ +M G P E T++ V+S+ ++
Sbjct: 216 VFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIAC 275
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
L G+ +H G N ++ TALIDMYAKCG+V A +LF R+ E V +W+A+I G
Sbjct: 276 LPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITG 335
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKP 365
A HG A EAL+LF M + P+++TF+G L AC+ ++++G ++ M I P
Sbjct: 336 YAMHGLAVEALDLFERMMKEA-QPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINP 394
Query: 366 MRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVR 425
HY M D+L G L EAY I M P+ V ALL++ H V E
Sbjct: 395 TVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALE-- 452
Query: 426 RRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRF 485
+L+ELEP S N VI+AN YA+ G WE V+ +R+ M + G+KK SW+E+ ++ F
Sbjct: 453 -KLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAF 511
Query: 486 YSGYDSQVELAGIYQILETLNLHMK 510
SG S IY L+ L M+
Sbjct: 512 LSGDVSHPNSGAIYAELKRLEGLMR 536
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 157/412 (38%), Positives = 219/412 (53%), Gaps = 3/412 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I WN LI G + R EA +F +++ G+ T VLK+ A + + QV A
Sbjct: 277 ILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHAL 336
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K G D + N L+ Y C DA +VF++ +++ +IT + A
Sbjct: 337 AEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGA 396
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F++M G EPD + +L+AC L GK VH LI+R + + G AL+
Sbjct: 397 IKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYT 456
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG++ A L FS + E V +WSAMI GLAQHG+ + ALELF M + I+PN++T
Sbjct: 457 YAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITM 516
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
VLCACNHAG+V++ RYF+ M+ + GI HY M D+L RAG L +A + +MP
Sbjct: 517 TSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMP 576
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
FQ N V ALL AS +H +G +L LEP S V++AN YA GMW +
Sbjct: 577 FQANASVWGALLGASRVHK---DPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNE 633
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
V+ VR+ MK+ +KK MSWVE+ +H F G S IY L+ L
Sbjct: 634 VAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELG 685
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 183/418 (43%), Gaps = 38/418 (9%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HA +G +D + LV + AR + ++ + WN L+ Y
Sbjct: 28 QVHAMAMATGFGSDVFVANALV--AMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYV 85
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+D+ +A+ VF +M GI+PTEF + V+ AC ++ G QV A V + G + DV+
Sbjct: 86 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVF 145
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
T N LV Y R A +F+ M + VVSWN +I+ CV N A+ ++MK G
Sbjct: 146 TANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSG 205
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
P+ + +L AC G LG+ +H +I+ + +G L+DMYAK + A
Sbjct: 206 LVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAM 265
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL------- 338
+F M ++ W+A+I G + G +EA +F ++ + N T VL
Sbjct: 266 KVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLE 325
Query: 339 --CACNHAGMVEDGYRYFHEMEHVHGI-----------KPMR----------IHYHTMAD 375
A + + + + V+G+ +R I +M
Sbjct: 326 AASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMIT 385
Query: 376 ILARAGHLKEAYTFIMNM---PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLE 430
L++ H + A M M +P+P VL +LL+A + A Q G +V L++
Sbjct: 386 ALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ---GKQVHAHLIK 440
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 124/237 (52%), Gaps = 5/237 (2%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M+ G+ EF P VLK C + L G QV A +G SDV+ N LV YG
Sbjct: 1 MRAEGVCCNEFALPVVLK-CVPDAQL--GAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57
Query: 180 KRDACKVFDDM-CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
DA +VFD+ ER+ VSWN +++ V+N G+A+ F +M G +P E V++
Sbjct: 58 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
ACT N+ G+ VH ++ G + AL+DMY K G V A ++F +M + +V +
Sbjct: 118 ACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVS 177
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
W+A+I G +G+ A+EL MK+S + PN +L AC AG + G R H
Sbjct: 178 WNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLG-RQIH 233
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 164/393 (41%), Gaps = 23/393 (5%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HA + G + D LV ++ S++ + DS + WN LI G
Sbjct: 130 QVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIA---SVIFEKMPDSDVVSWNALISGCV 186
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ A+ + + MK G+ P F +LKACA + G Q+ + K+ DSD Y
Sbjct: 187 LNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDY 246
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
LV Y DA KVFD M R ++ WN +I+ C EA F ++ G
Sbjct: 247 IGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEG 306
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+ TT+ VL + L S + VH + G + + + LID Y KC + A
Sbjct: 307 LGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAI 366
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F ++ ++MI L+Q + E A++LF M + P+ +L AC
Sbjct: 367 RVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 426
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL----ARAGHLKEAYTFIMNMPFQPNPIV 401
E G + H H IK + + L A+ G +++A ++P
Sbjct: 427 AYEQGKQV-----HAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP------- 474
Query: 402 LRALLSASSIHDAKYQDGVGNEVRRRLLELEPR 434
R ++S S++ Q G G +R LEL R
Sbjct: 475 ERGVVSWSAMIGGLAQHGHG----KRALELFGR 503
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 155/449 (34%), Positives = 245/449 (54%), Gaps = 12/449 (2%)
Query: 68 RFCTL-----SSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKR 122
RFC S +L A+ + SV + + ++I GYA EAV +F +M+
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKVVFREMSGRSV-VSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 123 RGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRD 182
GI P +T VL CA L+EG +V + ++ + D++ +N L+ Y C R+
Sbjct: 391 EGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMRE 450
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF-VKMKDLGFEPDETTMLVVLSACT 241
A VF +M + ++SWN +I +N + EA+ F + + + F PDE T+ VL AC
Sbjct: 451 AELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACA 510
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
L G+ +H ++ G + + +L+DMYAKCGA+ ARLLF + ++ +W+
Sbjct: 511 SLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTV 570
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
MI G HG+ +EA+ LF+ M+ + I P+ ++F+ +L AC+H+G+V++G+R+F+ M H
Sbjct: 571 MIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHEC 630
Query: 362 GIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSI-HDAKYQDGV 420
I+P HY + D+LAR G+L +AY FI NMP P+ + ALL I HD K + V
Sbjct: 631 KIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERV 690
Query: 421 GNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGG 480
+V ELEP + V++AN YAE WE+V +R+ + GL+K G SW+E+ G
Sbjct: 691 AEKV----FELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKG 746
Query: 481 SIHRFYSGYDSQVELAGIYQILETLNLHM 509
++ F +G S E I L + M
Sbjct: 747 RVNIFVAGDSSNPETEKIEAFLRGVRARM 775
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 153/339 (45%), Gaps = 5/339 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+H I SG + LV F + + AR + V I WN++I GY
Sbjct: 216 QLHGYILKSGFGERNSVGNSLVAF--YLKNHRVDSARKVFDEMTERDV-ISWNSIINGYV 272
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ + + VF+ M GI+ T V CA+ ++ G V K+ +
Sbjct: 273 SNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDR 332
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N L+ Y C A VF +M RSVVS+ +I GEAV F +M++ G
Sbjct: 333 FCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
PD T+ VL+ C L GK VH + E + + AL+DMYAKCG++ A
Sbjct: 393 ISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAE 452
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS-NMKNSSISPNYVTFLGVLCACNHA 344
L+FS M ++ +W+ +I G +++ YA EAL LF+ + SP+ T VL AC
Sbjct: 453 LVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASL 512
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+ G R H +G R +++ D+ A+ G L
Sbjct: 513 SAFDKG-REIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 174/401 (43%), Gaps = 39/401 (9%)
Query: 45 YQIHAQIQVSGLQNDAQILKELV------RFCTLSSSKNLTYARSILCNYVNDSVPIPWN 98
+Q H + L++D ++ K+++ R + + T+ RS V D+ N
Sbjct: 21 FQTHKE-----LRSDVRVRKDVIFNRASLRTVSDRADSITTFDRS-----VTDA-----N 65
Query: 99 NLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
+R + S + AV + + I P T VL+ CA+ L +G +V + +
Sbjct: 66 TQLRRFCESGNLKNAVKLLHVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRGN 123
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
G D + L Y +C ++A +VFD + + WN+++ ++ ++G F
Sbjct: 124 GFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLF 183
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
KM G E D T V + + L +++ G+ +H +++ G +G +L+ Y K
Sbjct: 184 KKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKN 243
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
V AR +F M E +V +W+++I G +G AE+ L +F M S I + T + V
Sbjct: 244 HRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVF 303
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY----HTMADILARAGHLKEAYTFIMNMP 394
C + ++ G H G+K +T+ D+ ++ G L A M
Sbjct: 304 AGCADSRLISLG-----RAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMS 358
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
R+++S +S+ ++G+ E + E+E G
Sbjct: 359 G-------RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 151/437 (34%), Positives = 233/437 (53%), Gaps = 23/437 (5%)
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ WN +I + + + E +++F+ M R I+P EFT+ +LKAC S L GM++ +
Sbjct: 448 AVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGS-LGYGMEIHS 506
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS------------------- 194
++ KSG+ S+ +L+ Y C +A K+ +R+
Sbjct: 507 SIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQE 566
Query: 195 -VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
VSWN II+ V +A F +M ++G PD+ T VL C L + LGK +H
Sbjct: 567 MCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIH 626
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
Q+I++ + + + L+DMY+KCG + +RL+F + + TW+AMI G A HG E
Sbjct: 627 AQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGE 686
Query: 314 EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
EA++LF M +I PN+VTF+ +L AC H G+++ G YF+ M+ +G+ P HY M
Sbjct: 687 EAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNM 746
Query: 374 ADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP 433
DIL ++G +K A I MPF+ + ++ R LL +IH + V E LL L+P
Sbjct: 747 VDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVE--VAEEATAALLRLDP 804
Query: 434 RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQV 493
+ S +++N YA+ GMWEKVS++RR M+ LKK G SWVEL +H F G +
Sbjct: 805 QDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHP 864
Query: 494 ELAGIYQILETLNLHMK 510
IY+ L + MK
Sbjct: 865 RWEEIYEELGLIYSEMK 881
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 140/260 (53%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN+++ GY + +++ VF+DM R GI+ T+ +LK C+ + + GMQ+
Sbjct: 146 VSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGI 205
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V + G D+DV + L+ Y +R ++ +VF + E++ VSW+ II CV+N L A
Sbjct: 206 VVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLA 265
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ +F +M+ + ++ VL +C L L LG +H ++ + + TA +DM
Sbjct: 266 LKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDM 325
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKC + A++LF E +N +++AMI G +Q + +AL LF + +S + + ++
Sbjct: 326 YAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISL 385
Query: 335 LGVLCACNHAGMVEDGYRYF 354
GV AC + +G + +
Sbjct: 386 SGVFRACALVKGLSEGLQIY 405
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 157/335 (46%), Gaps = 33/335 (9%)
Query: 33 SFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTL---SSSKNLTYARSILC 86
S L+ C + L Q+HA S D +VR TL + N+ A+ +
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADG-----IVRTATLDMYAKCDNMQDAQILFD 340
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
N N + +N +I GY+ + +A+ +F + G+ E + V +ACA + GL+
Sbjct: 341 NSENLNRQ-SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLS 399
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
EG+Q+ KS L DV N + YG C+ +A +VFD+M R VSWN II
Sbjct: 400 EGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHE 459
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+N E + FV M EPDE T +L ACT G+L G +H +++ G N
Sbjct: 460 QNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSS 518
Query: 267 LGTALIDMYAKCGAVGCARLLFSR----------MEEINVW----------TWSAMILGL 306
+G +LIDMY+KCG + A + SR MEE+ +W+++I G
Sbjct: 519 VGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGY 578
Query: 307 AQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
+E+A LF+ M I+P+ T+ VL C
Sbjct: 579 VMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTC 613
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 103/241 (42%), Gaps = 31/241 (12%)
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
+ FV K CA+ L G Q A++ SG + N L++ Y + R A VFD M
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 192 ERSVVSWNVIIT-----------------VCVENL--WLGEAVGY------------FVK 220
R VVSWN +I + V ++ W GY FV
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
M G E D T ++L C+ L + SLG +H ++ G + +AL+DMYAK
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 230
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
+ +F + E N +WSA+I G Q+ AL+ F M+ + + + VL +
Sbjct: 231 FVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRS 290
Query: 341 C 341
C
Sbjct: 291 C 291
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILCNYVNDSVPIPWNNLIR 102
QIHAQ+ LQ+D I LV C L + +S+ ++V WN +I
Sbjct: 624 QIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVT------WNAMIC 677
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS-GLD 161
GYA + EA+ +F M IKP T+ +L+ACA + +++G++ + + GLD
Sbjct: 678 GYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLD 737
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVCV 206
+ +N+V G + + A ++ +M E V W ++ VC
Sbjct: 738 PQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCT 783
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 161/466 (34%), Positives = 250/466 (53%), Gaps = 13/466 (2%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+H SGL +D + LV + S Y + N + I WN++I A
Sbjct: 307 QVHGIAVKSGLDSDVSVANSLV---NMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCA 363
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVL-----KACAEISGLNEGMQVQANVTKSGL 160
S E+V +FID+ G+KP FT + KAC + L++G Q+ A+ K+G
Sbjct: 364 QSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGF 423
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK 220
DSD++ N+ ++ Y C +A VF+ + V+W +I+ CV+N +A+ + +
Sbjct: 424 DSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHR 483
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
M+ PDE T ++ A + + L G+ +H +I+ V + +GT+L+DMYAKCG
Sbjct: 484 MRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGN 543
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
+ A LF +M N+ W+AM++GLAQHG AEEA+ LF +MK+ I P+ V+F+G+L A
Sbjct: 544 IEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSA 603
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPI 400
C+HAG+ + Y Y H M + +GI+P HY + D L RAG ++EA I MPF+ +
Sbjct: 604 CSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASAS 663
Query: 401 VLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVR 459
+ RALL A I D + G V RL LEP S V+++N YA W+ V++ R
Sbjct: 664 INRALLGACRIQGDVE----TGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDAR 719
Query: 460 RFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+ MK +KK G SW+++ +H F S + IY +E +
Sbjct: 720 KMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEM 765
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 176/381 (46%), Gaps = 33/381 (8%)
Query: 48 HAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPWNNLIRG 103
HA+I VSG D + L+ S +L+ AR + D+ P + WN ++
Sbjct: 100 HARIVVSGSAGDHFLSNNLLTM--YSKCGSLSSARQVF-----DTTPERDLVTWNAILGA 152
Query: 104 YAWS-----DRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
YA S +E + +F ++ T T VLK C L V K
Sbjct: 153 YAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKI 212
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
GL+ DV+ + LV Y C R RDA +FD M ER VV WN+++ V+ EA F
Sbjct: 213 GLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLF 272
Query: 219 VKMKDLGFEPDETTMLVVLSACTELG--NLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
+ G PDE ++ ++L+ C G +L LGK VH ++ G + + +L++MY+
Sbjct: 273 SEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYS 332
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
K G AR +F+ M+ +++ +W++MI AQ EE++ LF ++ + + P++ T
Sbjct: 333 KMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLAS 392
Query: 337 VLC-----ACNHAGMVEDGYRYFHEMEHVHGIKP---MRIHYHT-MADILARAGHLKEAY 387
+ AC +++ G + H H IK +H ++ + D+ + G + A
Sbjct: 393 ITLATAAKACGCLVLLDQGKQI-----HAHAIKAGFDSDLHVNSGILDMYIKCGDMVNA- 446
Query: 388 TFIMNMPFQPNPIVLRALLSA 408
+ N P+ + +++S
Sbjct: 447 GIVFNYISAPDDVAWTSMISG 467
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 105/234 (44%), Gaps = 10/234 (4%)
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
+L+ L G A + SG D + +NNL+ Y C A +VFD ER
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142
Query: 195 VVSWNVII-----TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
+V+WN I+ +V + E + F ++ T+ VL C G L
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
+ VH I+ G + + AL+++Y+KCG + ARLLF M E +V W+ M+ G Q
Sbjct: 203 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 262
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
G +EA +LFS S + P+ + +L C AG + + VHGI
Sbjct: 263 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDD-----LELGKQVHGI 311
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 154/449 (34%), Positives = 237/449 (52%), Gaps = 34/449 (7%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN++I G EA+ ++ +M+ ++P E T ++ +C+++ LN G +
Sbjct: 225 VTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCY 284
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC----------------------- 191
+ + GL+ + N L+ Y C A +FD+M
Sbjct: 285 IKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVA 344
Query: 192 --------ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
E+SVV WN II+ CV+ EA+ F +M+ EPD+ TM+ LSAC++L
Sbjct: 345 REILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQL 404
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
G L +G W+H + ++ LGTAL+DMYAKCG + A +F + + N TW+A+I
Sbjct: 405 GALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVI 464
Query: 304 LGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
GLA HG A++AL FS M + I P+ +TFLGVL AC H G+VE+G +YF EM +
Sbjct: 465 CGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNV 524
Query: 364 KPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNE 423
P HY M D+L RAGHL+EA + NMP + VL AL A ++ +G
Sbjct: 525 SPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYG---NVQIGER 581
Query: 424 VRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIH 483
+LLE++P+ S N V++A+ Y+E MW++ + R+ M + G++K G S VE+ G +H
Sbjct: 582 TAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVEINGIVH 641
Query: 484 RFYSGYDSQVELAGIYQILETLNLHMKVL 512
F S + IY+ L TL + V+
Sbjct: 642 EFVVRDVSHPQSEWIYECLVTLTKQLDVI 670
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/413 (30%), Positives = 192/413 (46%), Gaps = 35/413 (8%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LS L+ C S L QI AQ+ +GL + LV FC LS SK L Y IL
Sbjct: 61 LSILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIKEL 120
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEISGLNEGMQ 150
+V WN IRGY S ++ M G +KP TYP +LK C G+
Sbjct: 121 NV-FSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLG 179
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
V +V K G + D++ +N + SC A VF+ R +V+WN +IT CV+
Sbjct: 180 VLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGL 239
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
EA+ + +M+ P+E TM+ ++S+C+++ +L+LGK H + E G L A
Sbjct: 240 AIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNA 299
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY------------------- 311
L+DMY KCG + AR+LF M + + +W+ M+LG A+ G+
Sbjct: 300 LMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPW 359
Query: 312 ------------AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+EAL LF M+ +I P+ VT + L AC+ G ++ G H +E
Sbjct: 360 NAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIER 419
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
H + + D+ A+ G++ A +P Q N + A++ ++H
Sbjct: 420 -HKLSIDVALGTALVDMYAKCGNIARALQVFEEIP-QRNCLTWTAVICGLALH 470
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 139/316 (43%), Gaps = 50/316 (15%)
Query: 78 LTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLK 137
L AR IL SV +PWN +I G + + +EA+ +F +M+ R I+P + T L
Sbjct: 341 LDVAREILYKIPEKSV-VPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLS 399
Query: 138 ACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS 197
AC+++ L+ G+ + + + L DV LV Y C A +VF+++ +R+ ++
Sbjct: 400 ACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLT 459
Query: 198 WNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLI 257
W +I + +A+ YF KM +G PDE T L VLSAC H L+
Sbjct: 460 WTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSAC-----------CHGGLV 508
Query: 258 ERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM-EEINVWT----WSAMILGLAQHGYA 312
E G R FS M + NV +S M+ L + G+
Sbjct: 509 EEG------------------------RKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHL 544
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRY-FHEMEHVHGIKPMRI-HY 370
EEA EL NM ++ + + AC G V+ G R F +E I P +Y
Sbjct: 545 EEAEELVKNMP---MAADAAVLGALFFACRVYGNVQIGERTAFKLLE----IDPQDSGNY 597
Query: 371 HTMADILARAGHLKEA 386
+A + + A KEA
Sbjct: 598 VLLASMYSEAKMWKEA 613
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 166/464 (35%), Positives = 242/464 (52%), Gaps = 16/464 (3%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPWNNLI 101
QIHA I ND + L+ S +L V D +P + WN++I
Sbjct: 221 QIHALIHKHCFLNDPFVATALLDMYAKCGSM-------LLAENVFDEMPHRNLVSWNSMI 273
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
G+ + A+ VF ++ G P + + VL ACA + L+ G QV ++ K GL
Sbjct: 274 VGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLV 331
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
VY N+LV Y C DA K+F +R VV+WNV+I C +A YF M
Sbjct: 332 GLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAM 391
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
G EPDE + + A + L+ G +H +++ G V N ++ ++L+ MY KCG++
Sbjct: 392 IREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSM 451
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
A +F +E NV W+AMI QHG A EA++LF M N + P Y+TF+ VL AC
Sbjct: 452 LDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSAC 511
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIV 401
+H G ++DG++YF+ M +VH IKP HY M D+L R G L+EA FI +MPF+P+ +V
Sbjct: 512 SHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLV 571
Query: 402 LRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRF 461
ALL A H A + +G EV RL +LEP N ++++N Y GM E+ VRR
Sbjct: 572 WGALLGACGKH-ANVE--MGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRL 628
Query: 462 MKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
M G++K G SW+++ F + S IY +L+ L
Sbjct: 629 MGINGVRKESGCSWIDVKNRTFVFNANDRSHSRTQEIYGMLQKL 672
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 182/397 (45%), Gaps = 13/397 (3%)
Query: 40 SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPI-PWN 98
S KH QIH+Q+ + N A + + ++ + + Y + S + W
Sbjct: 112 SLKHATQIHSQLVTT--NNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWT 169
Query: 99 NLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
LI + S++P +A+ F M+ GI P FT+ +L ACA + L+EG Q+ A + K
Sbjct: 170 TLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKH 229
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
+D + L+ Y C A VFD+M R++VSWN +I V+N G A+G F
Sbjct: 230 CFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVF 289
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
++ LG PD+ ++ VLSAC L L GK VH +++RG V + +L+DMY KC
Sbjct: 290 REVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKC 347
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
G A LF + +V TW+ MI+G + E+A F M + P+ ++ +
Sbjct: 348 GLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLF 407
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
A + G + +K RI ++ + + G + +AY + + N
Sbjct: 408 HASASIAALTQGTMIHSHVLKTGHVKNSRIS-SSLVTMYGKCGSMLDAYQ-VFRETKEHN 465
Query: 399 PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
+ A+++ +Q G NE + E+ G
Sbjct: 466 VVCWTAMITVF------HQHGCANEAIKLFEEMLNEG 496
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 7/200 (3%)
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEE-- 293
+L+ +L +L +H QL+ + L+ +YAKCG++ LLF+
Sbjct: 103 LLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPS 162
Query: 294 INVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRY 353
NV TW+ +I L++ +AL F+ M+ + I PN+ TF +L AC HA ++ +G +
Sbjct: 163 TNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEG-QQ 221
Query: 354 FHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHD 413
H + H H + D+ A+ G + A MP + N + +++ + +
Sbjct: 222 IHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHR-NLVSWNSMI-VGFVKN 279
Query: 414 AKYQDGVGNEVRRRLLELEP 433
Y +G V R +L L P
Sbjct: 280 KLYGRAIG--VFREVLSLGP 297
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 151/437 (34%), Positives = 233/437 (53%), Gaps = 23/437 (5%)
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ WN +I + + + E +++F+ M R I+P EFT+ +LKAC S L GM++ +
Sbjct: 406 AVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGS-LGYGMEIHS 464
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS------------------- 194
++ KSG+ S+ +L+ Y C +A K+ +R+
Sbjct: 465 SIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQE 524
Query: 195 -VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
VSWN II+ V +A F +M ++G PD+ T VL C L + LGK +H
Sbjct: 525 MCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIH 584
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
Q+I++ + + + L+DMY+KCG + +RL+F + + TW+AMI G A HG E
Sbjct: 585 AQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGE 644
Query: 314 EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
EA++LF M +I PN+VTF+ +L AC H G+++ G YF+ M+ +G+ P HY M
Sbjct: 645 EAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNM 704
Query: 374 ADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP 433
DIL ++G +K A I MPF+ + ++ R LL +IH + V E LL L+P
Sbjct: 705 VDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVE--VAEEATAALLRLDP 762
Query: 434 RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQV 493
+ S +++N YA+ GMWEKVS++RR M+ LKK G SWVEL +H F G +
Sbjct: 763 QDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHP 822
Query: 494 ELAGIYQILETLNLHMK 510
IY+ L + MK
Sbjct: 823 RWEEIYEELGLIYSEMK 839
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 140/260 (53%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN+++ GY + +++ VF+DM R GI+ T+ +LK C+ + + GMQ+
Sbjct: 104 VSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGI 163
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V + G D+DV + L+ Y +R ++ +VF + E++ VSW+ II CV+N L A
Sbjct: 164 VVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLA 223
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ +F +M+ + ++ VL +C L L LG +H ++ + + TA +DM
Sbjct: 224 LKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDM 283
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKC + A++LF E +N +++AMI G +Q + +AL LF + +S + + ++
Sbjct: 284 YAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISL 343
Query: 335 LGVLCACNHAGMVEDGYRYF 354
GV AC + +G + +
Sbjct: 344 SGVFRACALVKGLSEGLQIY 363
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 157/335 (46%), Gaps = 33/335 (9%)
Query: 33 SFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTL---SSSKNLTYARSILC 86
S L+ C + L Q+HA S D +VR TL + N+ A+ +
Sbjct: 244 SVLRSCAALSELRLGGQLHAHALKSDFAADG-----IVRTATLDMYAKCDNMQDAQILFD 298
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
N N + +N +I GY+ + +A+ +F + G+ E + V +ACA + GL+
Sbjct: 299 NSENLNRQ-SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLS 357
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
EG+Q+ KS L DV N + YG C+ +A +VFD+M R VSWN II
Sbjct: 358 EGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHE 417
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+N E + FV M EPDE T +L ACT G+L G +H +++ G N
Sbjct: 418 QNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSS 476
Query: 267 LGTALIDMYAKCGAVGCARLLFSR----------MEEINVW----------TWSAMILGL 306
+G +LIDMY+KCG + A + SR MEE+ +W+++I G
Sbjct: 477 VGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGY 536
Query: 307 AQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
+E+A LF+ M I+P+ T+ VL C
Sbjct: 537 VMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTC 571
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 99/234 (42%), Gaps = 31/234 (13%)
Query: 139 CAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSW 198
CA+ L G Q A++ SG + N L++ Y + R A VFD M R VVSW
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 199 NVIIT-----------------VCVENL--WLGEAVGY------------FVKMKDLGFE 227
N +I + V ++ W GY FV M G E
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
D T ++L C+ L + SLG +H ++ G + +AL+DMYAK + +
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
F + E N +WSA+I G Q+ AL+ F M+ + + + VL +C
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSC 249
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILCNYVNDSVPIPWNNLIR 102
QIHAQ+ LQ+D I LV C L + +S+ ++V WN +I
Sbjct: 582 QIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVT------WNAMIC 635
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS-GLD 161
GYA + EA+ +F M IKP T+ +L+ACA + +++G++ + + GLD
Sbjct: 636 GYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLD 695
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVCV 206
+ +N+V G + + A ++ +M E V W ++ VC
Sbjct: 696 PQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCT 741
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 169/509 (33%), Positives = 259/509 (50%), Gaps = 46/509 (9%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW 97
C S + Q H+ + GL + + + FC+LS ++ YA + N + +
Sbjct: 12 CSSMAEVKQQHSLLLRLGLSTNNHAMSRIFTFCSLSKHGDINYALKLFTTLPNPDTFL-Y 70
Query: 98 NNLIRGY-AWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
N L + + + S P ++ + M + + P FT+P +++AC E Q+ A+V
Sbjct: 71 NTLFKAFFSLSQTPSLSLLFYSHMLQHCVTPNAFTFPSLIRACKL---EEEAKQLHAHVL 127
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM-------------------------- 190
K G D Y NNL+ Y + DA +VF M
Sbjct: 128 KFGFGGDTYALNNLIHVYFAFGSLDDARRVFCTMSDPNVVSWTSLVSGYSQWGLVDEAFR 187
Query: 191 ------CERSVVSWNVIITVCVENLWLGEAVGYFVKMK-DLGFEPDETTMLVVLSACTEL 243
C+++ VSWN +I V+ EA F +M+ + E D +LSACT +
Sbjct: 188 VFELMPCKKNSVSWNAMIACFVKGNRFREAFALFRRMRVEKKMELDRFVAATMLSACTGV 247
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
G L G W+H + + G VL+ +L T +IDMY KCG + A +F ++ V +W+ MI
Sbjct: 248 GALEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLKVKRVSSWNCMI 307
Query: 304 LGLAQHGYAEEALELFSNMKNSS-ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
G A HG E+A+ LF M+ + ++P+ +TF+ VL AC H+G+VE+G+ YF M VHG
Sbjct: 308 GGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMVDVHG 367
Query: 363 IKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGN 422
I P + HY M D+LARAG L+EA I MP P+ VL ALL A IH +G
Sbjct: 368 IDPTKEHYGCMVDLLARAGRLEEAKKVIDEMPMSPDAAVLGALLGACRIHG---NLELGE 424
Query: 423 EVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSI 482
EV R++EL+P S VI+ N YA G WE+V+ VR+ M + G+KK G S +E+ G +
Sbjct: 425 EVGNRVIELDPENSGRYVILGNMYASCGKWEQVAGVRKLMDDRGVKKEPGFSMIEMEGVV 484
Query: 483 HRFYSGYD----SQVELAGIYQILETLNL 507
+ F +G ++ A IY++LE++ +
Sbjct: 485 NEFVAGGRDHPLAEAIYAKIYEMLESIRV 513
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 121/292 (41%), Gaps = 34/292 (11%)
Query: 33 SFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVR--------------FCTLSSSKNL 78
S ++ C ++ Q+HA + G D L L+ FCT+S +
Sbjct: 108 SLIRACKLEEEAKQLHAHVLKFGFGGDTYALNNLIHVYFAFGSLDDARRVFCTMSDPNVV 167
Query: 79 TYARSILCNY-----------VNDSVP-----IPWNNLIRGYAWSDRPREAVWVFIDMK- 121
++ S++ Y V + +P + WN +I + +R REA +F M+
Sbjct: 168 SWT-SLVSGYSQWGLVDEAFRVFELMPCKKNSVSWNAMIACFVKGNRFREAFALFRRMRV 226
Query: 122 RRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKR 181
+ ++ F +L AC + L +GM + V K+G+ D ++ Y C
Sbjct: 227 EKKMELDRFVAATMLSACTGVGALEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLD 286
Query: 182 DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF-EPDETTMLVVLSAC 240
A VF + + V SWN +I + +A+ F +M++ PD T + VL+AC
Sbjct: 287 KAFHVFCGLKVKRVSSWNCMIGGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTAC 346
Query: 241 TELGNLSLGKWVHLQLIE-RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM 291
G + G + +++ G + ++D+ A+ G + A+ + M
Sbjct: 347 AHSGLVEEGWYYFRYMVDVHGIDPTKEHYGCMVDLLARAGRLEEAKKVIDEM 398
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 157/485 (32%), Positives = 255/485 (52%), Gaps = 12/485 (2%)
Query: 32 LSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
+S LK C SK L + IH Q+ SG+ D+ + LV S N YA +
Sbjct: 195 ISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSAN--YACKVFGEI 252
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
V + W LI G+ ++ + +F M G P +T+ +L++C+ +S ++ G
Sbjct: 253 PERDV-VSWTALITGFV-AEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLG 310
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
QV A + K+ LD + + LV Y R DA +F+ + +R + +W VI+ ++
Sbjct: 311 KQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQD 370
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+AV F++M+ G +P+E T+ LS C+ + L G+ +H I+ G + +
Sbjct: 371 GQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVA 430
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
+AL+DMYAKCG V A ++F + + +W+ +I G +QHG +AL+ F M +
Sbjct: 431 SALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTV 490
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
P+ VTF+GVL AC+H G++E+G ++F+ + ++GI P HY M DIL RAG E +
Sbjct: 491 PDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVES 550
Query: 389 FIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAE 448
FI M N ++ +L A +H G +L ELEP N ++++N +A
Sbjct: 551 FIEEMKLTSNVLIWETVLGACKMHG---NIEFGERAAMKLFELEPEIDSNYILLSNMFAA 607
Query: 449 VGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLH 508
GMW+ V+NVR M G+KK G SWVE+ G +H F S S ++ I+ L+ +LH
Sbjct: 608 KGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIH--LKLQDLH 665
Query: 509 MKVLN 513
K+++
Sbjct: 666 QKLMS 670
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 168/339 (49%), Gaps = 9/339 (2%)
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
NNL+ G+ ++ + + I + G +P +T+ +LK CA LNEG + V K
Sbjct: 160 NNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIK 219
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
SG++ D + N+LV Y C ACKVF ++ ER VVSW +IT V + G +
Sbjct: 220 SGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGY-GSGLRI 278
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
F +M GF P+ T + +L +C+ L ++ LGK VH Q+++ N +GTAL+DMYAK
Sbjct: 279 FNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAK 338
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
+ A +F+R+ + +++ W+ ++ G AQ G E+A++ F M+ + PN T
Sbjct: 339 NRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASS 398
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
L C+ ++ G R H M G + D+ A+ G +++A
Sbjct: 399 LSGCSRIATLDSG-RQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVF------- 450
Query: 398 NPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGS 436
+ +V R +S ++I Q G G + + + G+
Sbjct: 451 DGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGT 489
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 100/240 (41%), Gaps = 1/240 (0%)
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V K+G+ D + ++LV Y C + A +V ++M + V WN ++ L EA
Sbjct: 15 VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEA 74
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
V F M+ ++ ++SA LG+ G+ +H + + G + + A + M
Sbjct: 75 VQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTM 134
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y K +V F M N+ + + ++ G ++ + + PN TF
Sbjct: 135 YMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTF 194
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ +L C G + +G + H GI P ++++ ++ A+ G A +P
Sbjct: 195 ISILKTCASKGDLNEG-KAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 253
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 48/96 (50%)
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
K + ++I+ G + L ++L+++Y KC ++ CAR + M +V W+ +
Sbjct: 9 KKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSP 68
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+EA++LF M+++ I N F ++ A G
Sbjct: 69 YPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLG 104
>gi|359479098|ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 157/454 (34%), Positives = 250/454 (55%), Gaps = 37/454 (8%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAE--ISGLNEGMQVQ 152
+ W + I + + + EA F M+ G++P T+ +L AC + + GL G +
Sbjct: 55 VSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFGGSIH 114
Query: 153 ANVTKSGLDSD-VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
A V K GLD++ V LV Y C + A +FD+M R+ VSWN +I C+ N +
Sbjct: 115 AYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNGEV 174
Query: 212 GEAV------------------GYFVK-------------MKDLGFEPDETTMLVVLSAC 240
GEA+ G FVK M+ G EPD T++ VL+AC
Sbjct: 175 GEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLAAC 234
Query: 241 TELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
LG L LG W++ ++++ N ++ +LIDMY++CG + AR +F +M + ++ +W+
Sbjct: 235 ANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRSLVSWN 294
Query: 301 AMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHV 360
+MI+G A +G+AEEALE F+ M+ P+ V+F G L AC+H+G+V++G ++F M+
Sbjct: 295 SMIVGFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQFFDIMKRT 354
Query: 361 HGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGV 420
I P HY + D+ +RAG L++A I NMP +PN +VL +LL+A H G+
Sbjct: 355 RKISPRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHG---DVGL 411
Query: 421 GNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGG 480
+ + L E++P N V+++N YA VG W+ S VR+ MK +G+ K G S +E+ G
Sbjct: 412 AERLMKYLCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGFSSIEMDG 471
Query: 481 SIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
SIH F +G + VE IY +L+ L L +++ +
Sbjct: 472 SIHEFVAGDKTHVETQNIYAMLDHLFLELRICGY 505
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 124/278 (44%), Gaps = 36/278 (12%)
Query: 84 ILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS 143
+L + +++ I W ++I G+ +A+ F +M+ G++P T VL ACA +
Sbjct: 179 VLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLAACANLG 238
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
L G+ + V K ++ +N+L+ Y C R A +VF+ M +RS+VSWN +I
Sbjct: 239 ALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMIV 298
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
N EA+ +F M+ GF PD + L+AC+ G + G LQ + +
Sbjct: 299 GFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEG----LQFFD--IMK 352
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
+ + I+ Y GC L+SR G E+AL + +NM
Sbjct: 353 RTRKISPRIEHY------GCLVDLYSRA------------------GRLEDALNVIANMP 388
Query: 324 NSSISPNYVTFLGVLCAC---NHAGMVEDGYRYFHEME 358
+ PN V +L AC G+ E +Y E++
Sbjct: 389 ---MKPNEVVLGSLLAACRTHGDVGLAERLMKYLCEVD 423
>gi|297793123|ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310281|gb|EFH40705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 531
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 173/510 (33%), Positives = 265/510 (51%), Gaps = 52/510 (10%)
Query: 42 KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP----W 97
K L Q H + ++GL D + + + C S++ +L YA S+ + P P
Sbjct: 29 KTLKQSHCFMIITGLNRDNLNVAKFIEAC--SNAGHLRYAYSVFTHQ-----PFPNTYLH 81
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRG----IKPTEFTYPFVLKACAEISGLNEGMQVQA 153
N +IR + D R A + I + R+ KP FT+PFVLK +S + G QV
Sbjct: 82 NTMIRALSLVDE-RNAHSIAITVYRKFWAFCAKPDTFTFPFVLKIVVRVSDVWFGRQVHG 140
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSV------------------ 195
G DS V+ L++ Y SC DA KVFD+M R V
Sbjct: 141 QAVVFGFDSSVHVVTGLIQMYSSCGGLGDARKVFDEMRVRDVNVWNALLAGYGKVGEMDE 200
Query: 196 ---------------VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
VSW +I+ + EA+ F +M +PDE T+L VLSAC
Sbjct: 201 ARGLLEMMPCWVRNAVSWTCVISGYARSGRASEAIEVFQRMLMENVDPDEVTLLAVLSAC 260
Query: 241 TELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
+LG+L LG+ + + RG L A+IDMYAK G + A +F + E NV TW+
Sbjct: 261 ADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALEVFESVNERNVVTWT 320
Query: 301 AMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHV 360
+I GLA HG+ EAL +F M + + PN VTF+ +L AC+H G V+ G R+F+ M
Sbjct: 321 TIITGLATHGHGAEALVMFDRMVKAGVKPNDVTFIAILSACSHVGWVDLGNRFFNSMRSK 380
Query: 361 HGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGV 420
+GI P HY M D+L RAG L+EA I +MPF+ N + +LL+AS++H + V
Sbjct: 381 YGINPNIEHYGCMIDLLGRAGKLREAEEVIKSMPFESNAAIWGSLLAASNVH---HDIDV 437
Query: 421 GNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGG 480
G +L++LEP S N +++AN Y+ +G W++ +R+ MK +G+KK+ G S +E+
Sbjct: 438 GERALYQLIKLEPNNSGNYMLLANLYSNLGRWDESRMMRKMMKGIGVKKLAGESSIEVEN 497
Query: 481 SIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+++F SG S ++ I+++L+ ++L ++
Sbjct: 498 RVYKFISGDLSHPQVEKIHELLQEMDLQIQ 527
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 164/483 (33%), Positives = 246/483 (50%), Gaps = 10/483 (2%)
Query: 32 LSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
LS L C + K L IH+ I G +D QI L+ + +L AR +
Sbjct: 334 LSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISM--YARCGDLPKARELFYTM 391
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
+ I WN +I GYA + EA+ ++ M+ G+KP T+ +L ACA S +G
Sbjct: 392 PKRDL-ISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADG 450
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
+ ++ +SG+ S+ + N L+ Y C +A VF+ R V+SWN +I ++
Sbjct: 451 KMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQH 510
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
A F +M++ EPD T VLS C L LGK +H ++ E G L+ LG
Sbjct: 511 GSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLG 570
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI- 327
ALI+MY +CG++ AR +F ++ +V +W+AMI G A G +A+ELF M+N
Sbjct: 571 NALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFR 630
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
P+ TF +L ACNHAG+V +GY+ F ME +G+ P HY + +L RA +EA
Sbjct: 631 PPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAE 690
Query: 388 TFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYA 447
T I MPF P+ V LL A IH + L+L R ++++N YA
Sbjct: 691 TLINQMPFPPDAAVWETLLGACRIHG---NIALAEHAANNALKLNARNPAVYILLSNVYA 747
Query: 448 EVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNL 507
G W+ V+ +RR M+ G++K G SW+E+ IH F + S E A IY L+ L++
Sbjct: 748 AAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSV 807
Query: 508 HMK 510
M+
Sbjct: 808 EME 810
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 180/368 (48%), Gaps = 24/368 (6%)
Query: 39 CSKKHLY----QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL-CNYVNDSV 93
C++K L +IHAQ+ +G+ D + L+ RS+L + V +
Sbjct: 37 CTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINM--------YVKCRSVLDAHQVFKEM 88
Query: 94 P----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
P I WN+LI YA ++A +F +M+ G P + TY +L AC + L G
Sbjct: 89 PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
++ + + K+G D N+L+ YG C A +VF + R VVS+N ++ + +
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKA 208
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
++ E +G F +M G PD+ T + +L A T L GK +H +E G + ++GT
Sbjct: 209 YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGT 268
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
AL+ M +CG V A+ F + + +V ++A+I LAQHG+ EA E + M++ ++
Sbjct: 269 ALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVAL 328
Query: 330 NYVTFLGVLCACNHAGMVEDG---YRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
N T+L +L AC+ + +E G + + E H ++ + + + AR G L +A
Sbjct: 329 NRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIG----NALISMYARCGDLPKA 384
Query: 387 YTFIMNMP 394
MP
Sbjct: 385 RELFYTMP 392
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 172/358 (48%), Gaps = 7/358 (1%)
Query: 32 LSFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
+S L C S L +IH+QI +G Q D ++ L+ +L AR +
Sbjct: 132 ISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSM--YGKCGDLPRARQVFAGI 189
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
V + +N ++ YA +E + +F M GI P + TY +L A S L+EG
Sbjct: 190 SPRDV-VSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEG 248
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
++ + GL+SD+ LV C A + F + +R VV +N +I ++
Sbjct: 249 KRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQH 308
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
EA + +M+ G + TT L +L+AC+ L GK +H + E G + Q+G
Sbjct: 309 GHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIG 368
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
ALI MYA+CG + AR LF M + ++ +W+A+I G A+ EA+ L+ M++ +
Sbjct: 369 NALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVK 428
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
P VTFL +L AC ++ DG + HE GIK + + ++ R G L EA
Sbjct: 429 PGRVTFLHLLSACANSSAYADG-KMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEA 485
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 147/305 (48%), Gaps = 3/305 (0%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+IH GL +D ++ LV C ++ A+ + V + +N LI A
Sbjct: 250 RIHKLTVEEGLNSDIRVGTALVTMCVRCG--DVDSAKQAFKGIADRDVVV-YNALIAALA 306
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
EA + M+ G+ TY +L AC+ L G + +++++ G SDV
Sbjct: 307 QHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQ 366
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N L+ Y C A ++F M +R ++SWN II GEA+ + +M+ G
Sbjct: 367 IGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEG 426
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+P T L +LSAC + GK +H ++ G N L AL++MY +CG++ A+
Sbjct: 427 VKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQ 486
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F + +V +W++MI G AQHG E A +LF M+N + P+ +TF VL C +
Sbjct: 487 NVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPE 546
Query: 346 MVEDG 350
+E G
Sbjct: 547 ALELG 551
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 129/230 (56%), Gaps = 3/230 (1%)
Query: 126 KPTEF---TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRD 182
+PTE TY +L+ C L E ++ A + ++G+ D++ +N L+ Y CR D
Sbjct: 21 RPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLD 80
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
A +VF +M R V+SWN +I+ + + +A F +M++ GF P++ T + +L+AC
Sbjct: 81 AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYS 140
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
L GK +H Q+I+ G + ++ +L+ MY KCG + AR +F+ + +V +++ M
Sbjct: 141 PAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTM 200
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR 352
+ AQ Y +E L LF M + ISP+ VT++ +L A M+++G R
Sbjct: 201 LGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKR 250
>gi|255581953|ref|XP_002531775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528611|gb|EEF30631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 168/498 (33%), Positives = 260/498 (52%), Gaps = 48/498 (9%)
Query: 46 QIHAQIQVSGLQNDAQIL--KELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPWNN 99
Q+HAQ VSGL N + + L + T+S ++YARSI + +P +N
Sbjct: 6 QLHAQFVVSGLLNHHSLCGRRLLESYVTMS---EISYARSIF-----ERIPYLDVFVYNT 57
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
+IRG RP +++ +F ++ +KP +TY FVLKAC+ L EG QV + K+G
Sbjct: 58 MIRGLMLGKRPYDSLLLFNELLLGCLKPDNYTYTFVLKACSNQKALPEGKQVHCQIIKAG 117
Query: 160 LDSDVYTNNNLVRFYGS--------CRRKR-----------------------DACKVFD 188
+ + + +++L+ Y S C + A +FD
Sbjct: 118 ISPNTHIHSSLIHMYTSSGSIVEAECVLREFSEENTLAKNSMISGYLSKGHVDKARAMFD 177
Query: 189 DMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSL 248
M + V SW+ IIT C +N EA+ F M P+E+ ++ +LSAC LG L
Sbjct: 178 QMKAKDVASWSAIITGCTKNGMHTEALALFEDMMVSHTLPNESALVSLLSACAHLGALHQ 237
Query: 249 GKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ 308
G+W+H + G ++ +L TALIDMYAKCG + F +M ++ TW A+I G A
Sbjct: 238 GRWIHAYIDRIGADMSIRLSTALIDMYAKCGDIQSGYKFFRKMPRRDIVTWGAIISGFAI 297
Query: 309 HGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRI 368
+G A++ ELF M I PN V F+ +L AC+HAG VE+G YF++M GI+P
Sbjct: 298 YGQAKKCFELFEEMLADGIYPNGVIFVAILSACSHAGYVEEGKLYFNQMMVDLGIRPSIE 357
Query: 369 HYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRL 428
HY M D+L RAG LKEA FI++MP +PN ++ ++LSA H+ + G+ R L
Sbjct: 358 HYGCMVDLLGRAGRLKEAEEFIISMPEKPNSVIWGSMLSACRTHNDLNR---GSWAFRHL 414
Query: 429 LELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
+ELEPR + + G ++ + +R+ +++ G++ G S++E+ G+IH F G
Sbjct: 415 IELEPRSGDRYKLAGLMFGNAGEKQEATKIRKMIEDQGMETTSGSSFIEVDGTIHEFLVG 474
Query: 489 YDSQVELAGIYQILETLN 506
E A IY++ + LN
Sbjct: 475 DTIHNEAAEIYKVWKGLN 492
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 180/573 (31%), Positives = 281/573 (49%), Gaps = 74/573 (12%)
Query: 8 TTNHI---FPPKPSNCNSDLLSKARQCLSFLKLCCSK-----KHLYQIHAQIQVSGLQND 59
+T+H+ F P + ++ + + LKL SK ++L Q+HA + SG D
Sbjct: 5 STSHLPSPFKPVDFSAEKNIPTSKLPQKTVLKLFDSKSITSLQYLTQLHALVLRSGHFQD 64
Query: 60 AQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFID 119
+ L++ N +A + + N +V I WN +I+G +++ +A++ +
Sbjct: 65 HYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFI-WNIVIKGCLENNKLFKAIYFYGR 123
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGL------------------- 160
M +P +FTYP + KAC+ + EG Q+ +V K G+
Sbjct: 124 MVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGR 182
Query: 161 -----------DSDVYTNNNLVRFYGSCR------------------------------- 178
+SDV N ++ Y C
Sbjct: 183 LEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGG 242
Query: 179 RKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
DA K+FD+M ER +SW+ ++ + EA+ F +M+ P + VL+
Sbjct: 243 NLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLA 302
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
AC+ +G + G+WVH L L+ LGTAL+DMYAKCG + +F M+E ++T
Sbjct: 303 ACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFT 362
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
W+AMI GLA HG AE+ALELFS ++ + PN +T +GVL AC HAG V+ G R F M
Sbjct: 363 WNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMR 422
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD 418
+G+ P HY M D+L R+G EA I +MP +PN V ALL A IH
Sbjct: 423 EFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHG---NF 479
Query: 419 GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVEL 478
+ V + LLELEP+ S V+++N YA+VG ++ VS +R+ MKN G+K + G+S V+L
Sbjct: 480 DLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDL 539
Query: 479 GGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
G++H F G S ++ IY+ L+ + +++
Sbjct: 540 NGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQM 572
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 162/455 (35%), Positives = 227/455 (49%), Gaps = 38/455 (8%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I WN L+ G S R R+AV + M G P L A ++ + G Q+
Sbjct: 122 ITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGY 181
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC----------------------- 191
V K+G D L+ YG C R + +VFD+
Sbjct: 182 VVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEA 241
Query: 192 ------------ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
E +VVSW I+ CV+N EAV F +M+ G EP+ T+ VL A
Sbjct: 242 LRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPA 301
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
+ L G+ H + +G + +G+AL+DMYAKCG V AR++F M NV +W
Sbjct: 302 FANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSW 361
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+AMI G A HG AE A+ LF +M++S P+ VTF VL AC+ AG E+G YF+EM+H
Sbjct: 362 NAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQH 421
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
HGI P HY M +L RAG L +AY I MPF+P+ + +LL + +H
Sbjct: 422 KHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNVVLAE 481
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
V E L +LEP + N V+++N YA MW+ V+ +R MK VGLKK KG SW+E+
Sbjct: 482 VAAE---NLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGCSWIEIK 538
Query: 480 GSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+H +G S +A I + L+ L + M+ L F
Sbjct: 539 NKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGF 573
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 132/318 (41%), Gaps = 42/318 (13%)
Query: 127 PTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKV 186
P P LK+C S L + A +G+ D + ++L+ Y DA V
Sbjct: 21 PDPRLLPSALKSC---SALRLARALHAAAAVAGVSRDAFVASSLLHAYLRFGATADARSV 77
Query: 187 FDDMCERSVVSWNVIITVCVEN-----------------------LWLG----------- 212
D M R+VV W+ +I + W G
Sbjct: 78 LDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSGLNRSGRA 137
Query: 213 -EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
+AV V+M GF PD T + LSA ++G++++G+ +H +++ G L+ + TAL
Sbjct: 138 RDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATAL 197
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
IDMY KCG +F ++V + +A++ GL+++ EAL LF I N
Sbjct: 198 IDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNV 257
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAG---HLKEAYT 388
V++ ++ C G + F EM+ GI+P + + A H + A+
Sbjct: 258 VSWTSIVACCVQNGRDLEAVDLFREMQS-EGIEPNSVTIPCVLPAFANIAALMHGRSAHC 316
Query: 389 FIMNMPFQPNPIVLRALL 406
F + F + V AL+
Sbjct: 317 FSLRKGFHHDIYVGSALV 334
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 97/222 (43%), Gaps = 13/222 (5%)
Query: 23 DLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYAR 82
D+ K + +++ H+ V+GL +AQ+ + L F R
Sbjct: 199 DMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREF-------VGR 251
Query: 83 SILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI 142
I N V+ W +++ + R EAV +F +M+ GI+P T P VL A A I
Sbjct: 252 GIELNVVS------WTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANI 305
Query: 143 SGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII 202
+ L G + G D+Y + LV Y C R RDA +F+ M R+VVSWN +I
Sbjct: 306 AALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMI 365
Query: 203 TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELG 244
+ AV F M+ +PD T VL AC++ G
Sbjct: 366 GGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAG 407
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 4/145 (2%)
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
++ + F PD + L +C+ L +H G + + ++L+ Y + GA
Sbjct: 14 LRHVSFPPDPRLLPSALKSCSALRLARA---LHAAAAVAGVSRDAFVASSLLHAYLRFGA 70
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
AR + M V WSA+I A HG AE A L M++ + PN +T+ G++
Sbjct: 71 TADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSG 130
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKP 365
N +G D M H G P
Sbjct: 131 LNRSGRARDAVLALVRM-HGEGFLP 154
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 173/511 (33%), Positives = 259/511 (50%), Gaps = 55/511 (10%)
Query: 22 SDLLSKARQCLSFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNL 78
D + A S L C ++K Q+H + S +D I LV + +
Sbjct: 145 DDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDM--YAKCERP 202
Query: 79 TYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPF 134
AR + D++P + WN+LI Y + EA+ +F++M G P E T
Sbjct: 203 EDARRVF-----DAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSS 257
Query: 135 VLKACAEISGLNEGMQVQANVTK-SGLDSDVYTNNNLVRFYGSCRRK------------- 180
V+ ACA ++ EG QV A++ K L D+ NN LV Y C R
Sbjct: 258 VMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSR 317
Query: 181 ------------------RDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
DA VF M E++V++WNV+I +N EA+ FV++K
Sbjct: 318 SIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLK 377
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ------LGTALIDMYA 276
P T VL+AC + +L LG+ H+ +++ G + +G +L+DMY
Sbjct: 378 RDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYL 437
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
K G++ +F RM + +W+AMI+G AQ+G A++AL LF M S+ +P+ VT +G
Sbjct: 438 KTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIG 497
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
VL AC H+G+V++G RYFH M HGI P R HY M D+L RAGHLKEA I +MP +
Sbjct: 498 VLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPME 557
Query: 397 PNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVS 456
P+ ++ +LL A +H +G RL EL+P+ S V+++N YAE+G W +V
Sbjct: 558 PDSVLWASLLGACRLHK---NVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVF 614
Query: 457 NVRRFMKNVGLKKMKGMSWVELGGSIHRFYS 487
VRR MK+ G+ K G SW+E+G ++ F +
Sbjct: 615 RVRRSMKDRGVSKQPGCSWIEIGRKMNVFLA 645
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 129/310 (41%), Gaps = 43/310 (13%)
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
+L++ +SG A + KS + + + N LV Y R RDA +VFD++ R+
Sbjct: 26 LLRSAPNLSG---ARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRN 82
Query: 195 VVSWNVIITV----------------------CVENLWLG-----------EAVGYFVKM 221
S+N +++ C N + +A+ + M
Sbjct: 83 TFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAM 142
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
F + + LSAC + G+ VH + + + +AL+DMYAKC
Sbjct: 143 HADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERP 202
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
AR +F M E NV +W+++I Q+G EAL LF M + SP+ VT V+ AC
Sbjct: 203 EDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSAC 262
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIV 401
+G + M ++ + + + D+ A+ G EA +MP
Sbjct: 263 AGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPS------ 316
Query: 402 LRALLSASSI 411
R+++S +SI
Sbjct: 317 -RSIVSETSI 325
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 168/512 (32%), Positives = 276/512 (53%), Gaps = 32/512 (6%)
Query: 1 MVRFPVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDA 60
MV VP N+ +P + C AR L +KL + H ++ +G +D
Sbjct: 102 MVERGVPVDNYTYPFVLAAC-------AR--LGAVKLG------RRFHCEVLKNGFGSDL 146
Query: 61 QILKELVRFCTLSSSKNLTYARSILCNYVNDSVP---IPWNNLIRGYAWSDRPREAVWVF 117
++ L++F S C+ ++S + WN +I + +A +
Sbjct: 147 FVINALIQFYHNCGSFGCA------CDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLL 200
Query: 118 IDM-KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGS 176
+M K ++P E T ++ ACA++ L G + + + GLD ++ NN ++ Y
Sbjct: 201 DEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCK 260
Query: 177 CRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVV 236
C A +VF+ + E+ V+SW +++ ++ + EA+ F KM+ E DE T++ V
Sbjct: 261 CDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGV 320
Query: 237 LSACTELGNLSLGKWVHLQLIERGTVLNCQL--GTALIDMYAKCGAVGCARLLFSRMEEI 294
LSAC + G L GK++HL LI++ + NC L TAL+DMYAKCG++ A +F RM
Sbjct: 321 LSACAQTGALDQGKYIHL-LIDKFEI-NCDLVLETALVDMYAKCGSIDLALQVFRRMRVR 378
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYF 354
NV+TW+A+I GLA HG+ E+A+ LF M++ + P+ VTF+ +LCAC+HAG+V++G F
Sbjct: 379 NVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMF 438
Query: 355 HEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDA 414
M++ I+P HY + D+L RA + +A FI NMP + N ++ LL A +
Sbjct: 439 QAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACR---S 495
Query: 415 KYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMS 474
+ ++ RR++ELEP V+++N YA V W+ +R+ MKN G++K G S
Sbjct: 496 GGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCS 555
Query: 475 WVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
W+EL G IH+F +G S ++ IY ++E +
Sbjct: 556 WIELNGMIHQFVAGDRSHLQTEQIYAMIEEMT 587
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/399 (33%), Positives = 208/399 (52%), Gaps = 10/399 (2%)
Query: 16 KPSNCNSDLLSKARQCLSFLKL-CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSS 74
KPS+ + L+S + FLK C S Q HA + + L ++ +L+ F LS
Sbjct: 3 KPSSKCTKLIS-----VDFLKTHCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSH 57
Query: 75 SKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPF 134
S +L YAR + N P N +IRGYA S P EAV ++ M RG+ +TYPF
Sbjct: 58 SGDLNYARKLFTQMQNPD-PFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPF 116
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
VL ACA + + G + V K+G SD++ N L++FY +C AC VFD+ R
Sbjct: 117 VLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRD 176
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDL-GFEPDETTMLVVLSACTELGNLSLGKWVH 253
VV+WN++I + +A +M L PDE TM+ ++ AC +LGNL GK++H
Sbjct: 177 VVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLH 236
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
E G N ++ A++DMY KC + A+ +F+R+ E +V +W++M+ GLA+ GY +
Sbjct: 237 SYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQ 296
Query: 314 EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
EAL LF M+ + I + +T +GVL AC G ++ G +Y H + I + +
Sbjct: 297 EALALFQKMQLNKIELDEITLVGVLSACAQTGALDQG-KYIHLLIDKFEINCDLVLETAL 355
Query: 374 ADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
D+ A+ G + A M + N AL+ ++H
Sbjct: 356 VDMYAKCGSIDLALQVFRRMRVR-NVFTWNALIGGLAMH 393
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 153/423 (36%), Positives = 233/423 (55%), Gaps = 8/423 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGI---KPTEFTYPFVLKACAEISGLNEGMQV 151
+ W+ L+ G+ R EA +F DM +G+ PT L+ACA +S L G Q+
Sbjct: 300 VTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVAS--ALRACANLSDLCLGKQL 357
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
A + KSGL +D+ N+L+ Y A +FD M + VS++ +++ V+N
Sbjct: 358 HALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKA 417
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
EA F KM+ +PD TM+ ++ AC+ L L GK H +I RG + AL
Sbjct: 418 DEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNAL 477
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
IDMYAKCG + +R +F M ++ +W+ MI G HG +EA LF +MK+ + P+
Sbjct: 478 IDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDD 537
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
VTF+ ++ AC+H+G+V +G R+FH M H +GI P HY M D+LAR G L EAY FI
Sbjct: 538 VTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQ 597
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGM 451
MP + + V ALL A +H K D +G +V + +L P G+ N V+++N ++ G
Sbjct: 598 GMPLKADVRVWGALLGACRVH--KNID-LGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGR 654
Query: 452 WEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
+++ + VR K G KK G SW+E+ GS+H F G S + + IYQ L+ + + +
Sbjct: 655 FDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINK 714
Query: 512 LNF 514
L +
Sbjct: 715 LGY 717
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 166/359 (46%), Gaps = 22/359 (6%)
Query: 85 LCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACA 140
L ++ D +P P +N LIR Y+ +RR +P +T+PFVLKAC+
Sbjct: 81 LARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKACS 140
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
+ L V + ++GL +D++ + LV Y C R A VF M R VV+WN
Sbjct: 141 ALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNA 200
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
++ + + + + M+D P+ +T++ +L + G LS G+ VH +
Sbjct: 201 MLAGYALHGKYSDTIACLLLMQD-DHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRAC 259
Query: 261 TVLNCQ----LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
++ + + +GTAL+DMYAKCG + A +F M N TWSA++ G G EA
Sbjct: 260 SLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAF 319
Query: 317 ELFSNMKNSS---ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
LF +M +SP V L AC + + G + H + G+ +++
Sbjct: 320 SLFKDMLAQGLCFLSPTSVA--SALRACANLSDLCLG-KQLHALLAKSGLHTDLTAGNSL 376
Query: 374 ADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELE 432
+ A+AG + +A T M V++ +S S++ Q+G +E R +++
Sbjct: 377 LSMYAKAGLIDQATTLFDQM-------VVKDTVSYSALVSGYVQNGKADEAFRVFRKMQ 428
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/507 (32%), Positives = 254/507 (50%), Gaps = 45/507 (8%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HA + S D + L+ S ++ A + + ++ + WN+LI Y
Sbjct: 168 QVHALVSKSRYSTDVYMGSALIDM--YSKCGSVACAEEVFSGMIERNL-VTWNSLITCYE 224
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG-LDSDV 164
+ EA+ VF+ M G++P E T V+ ACA + L EG+Q+ A V K+ D+
Sbjct: 225 QNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDL 284
Query: 165 YTNNNLVRFYGSCRRKRDACKVFD-------------------------------DMCER 193
N LV Y C + +A +VFD M +R
Sbjct: 285 VLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQR 344
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
+VVSWN +I +N EA+ F +K P T +LSAC L +L LG+ H
Sbjct: 345 NVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAH 404
Query: 254 LQLIERGTVLNCQ------LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA 307
++++G +G +LIDMY KCG++ +F +M+E + +W+A+I+G A
Sbjct: 405 THVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYA 464
Query: 308 QHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
Q+GY EAL++F M P++VT +GVLCAC+HAG+VE+G YF ME HG+ P++
Sbjct: 465 QNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEE-HGLIPLK 523
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRR 427
HY M D+L RAG L EA I MP P+ +V +LL+A +H +G +
Sbjct: 524 DHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHG---NIEMGKHAAEK 580
Query: 428 LLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYS 487
LLE++P S V+++N YAE+G W V VR+ M+ G+ K G SW+E+ +H F
Sbjct: 581 LLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLV 640
Query: 488 GYDSQVELAGIYQILETLNLHMKVLNF 514
S IY +L+ L MK + +
Sbjct: 641 KDKSHPHRKQIYSVLKMLTEQMKRVGY 667
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 148/286 (51%), Gaps = 36/286 (12%)
Query: 92 SVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
S+P P WN+++ G+A DR E++ F+ M R E+++ L ACA + LN
Sbjct: 106 SMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNM 165
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G QV A V+KS +DVY + L+ Y C A +VF M ER++V+WN +IT +
Sbjct: 166 GTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQ 225
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQ 266
N EA+ FV+M D G EPDE T+ V+SAC L L G +H ++++ +
Sbjct: 226 NGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLV 285
Query: 267 LGTALIDMYAKC-------------------------------GAVGCARLLFSRMEEIN 295
LG AL+DMYAKC +V AR +FS+M + N
Sbjct: 286 LGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRN 345
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
V +W+A+I G Q+G EEAL LF +K SI P + TF +L AC
Sbjct: 346 VVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSAC 391
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 152/325 (46%), Gaps = 36/325 (11%)
Query: 127 PTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKV 186
P + +L +C V A + + +++ N L+ YG C DA K+
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 187 FDDMCERSVVSWNVIITVCVENLWLGEA-------------------------------V 215
FD M +R+ +WN +I+V ++ +L EA +
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY 275
YFVKM F +E + LSAC L +L++G VH + + + +G+ALIDMY
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMY 192
Query: 276 AKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFL 335
+KCG+V CA +FS M E N+ TW+++I Q+G A EALE+F M +S + P+ VT
Sbjct: 193 SKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLA 252
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPF 395
V+ AC +++G + + + + + + + D+ A+ + EA M
Sbjct: 253 SVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSI 312
Query: 396 QPNPIVLRALLS----ASSIHDAKY 416
+ N + +++S A+S+ A++
Sbjct: 313 R-NVVSETSMVSGYARAASVKAARF 336
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
++DL + P+ + +L +C + + VH +++ + + LID+Y KC
Sbjct: 7 VRDL-YLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
+ AR LF RM + N +TW+++I L + G+ +EA LF +M P+ ++ ++
Sbjct: 66 LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPE----PDQCSWNSMVSG 121
Query: 341 CNHAGMVEDGYRYFHEM 357
E+ YF +M
Sbjct: 122 FAQHDRFEESLEYFVKM 138
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 165/454 (36%), Positives = 237/454 (52%), Gaps = 41/454 (9%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN+LI Y + +A+ VF+ M G++P E T V+ ACA S + EG+Q+ A
Sbjct: 218 VSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHAR 277
Query: 155 VTK-SGLDSDVYTNNNLVRFYGSCRRKRDACKVFD------------------------- 188
V K +D+ N LV Y CRR +A VFD
Sbjct: 278 VVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKA 337
Query: 189 ------DMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
+M E++VVSWN +I +N EAV F+ +K P T +L+AC
Sbjct: 338 ARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACAN 397
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQ------LGTALIDMYAKCGAVGCARLLFSRMEEINV 296
L +L LG+ H Q+++ G +G +LIDMY KCG V L+F RM E +V
Sbjct: 398 LADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDV 457
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
+W+AMI+G AQ+GY ALE+F M S P++VT +GVL AC+HAG+VE+G RYFH
Sbjct: 458 VSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHS 517
Query: 357 MEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKY 416
M G+ PM+ H+ M D+L RAG L EA I MP QP+ +V +LL+A +H
Sbjct: 518 MRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHG--- 574
Query: 417 QDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWV 476
+G V +L+E++P S V+++N YAE+G W+ V VR+ M+ G+ K G SW+
Sbjct: 575 NIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGVIKQPGCSWI 634
Query: 477 ELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
E+ +H F I+ +L+ L MK
Sbjct: 635 EIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQMK 668
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 155/308 (50%), Gaps = 37/308 (12%)
Query: 92 SVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
S+P P WN ++ G+A DR EA+ F+DM E+++ L ACA ++ LN
Sbjct: 110 SMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNM 169
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G+Q+ A ++KS DVY + LV Y C A + FD M R++VSWN +IT +
Sbjct: 170 GIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQ 229
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN-CQ 266
N G+A+ FV M D G EPDE T+ V+SAC + G +H ++++R N
Sbjct: 230 NGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLV 289
Query: 267 LGTALIDMYAKC-------------------------------GAVGCARLLFSRMEEIN 295
LG AL+DMYAKC +V ARL+FS M E N
Sbjct: 290 LGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKN 349
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
V +W+A+I G Q+G EEA+ LF +K SI P + TF +L AC + ++ G R H
Sbjct: 350 VVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLG-RQAH 408
Query: 356 EMEHVHGI 363
HG
Sbjct: 409 TQILKHGF 416
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 128/261 (49%), Gaps = 11/261 (4%)
Query: 62 ILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMK 121
++ E C + + ++ AR + N + +V + WN LI GY + EAV +F+ +K
Sbjct: 319 VVSETSMVCGYARAASVKAARLMFSNMMEKNV-VSWNALIAGYTQNGENEEAVRLFLLLK 377
Query: 122 RRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK------SGLDSDVYTNNNLVRFYG 175
R I PT +T+ +L ACA ++ L G Q + K SG +SD++ N+L+ Y
Sbjct: 378 RESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYM 437
Query: 176 SCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLV 235
C D C VF+ M ER VVSWN +I +N + A+ F KM G +PD TM+
Sbjct: 438 KCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIG 497
Query: 236 VLSACTELGNLSLG-KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSR--ME 292
VLSAC+ G + G ++ H E G T ++D+ + G + A L M+
Sbjct: 498 VLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQ 557
Query: 293 EINVWTWSAMILGLAQHGYAE 313
NV W +++ HG E
Sbjct: 558 PDNV-VWGSLLAACKVHGNIE 577
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 140/299 (46%), Gaps = 33/299 (11%)
Query: 131 TYPF--VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD 188
+ PF +L +C + ++ A + K+ S+++ N LV YG C DA KVFD
Sbjct: 19 SSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFD 78
Query: 189 DMCERSVVSWNVIITV----------------------CVENLWLG---------EAVGY 217
M +R+ S+N +++V C N + EA+ +
Sbjct: 79 RMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRF 138
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
FV M F +E + LSAC L +L++G +H + + +L+ +G+AL+DMY+K
Sbjct: 139 FVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSK 198
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CG V CA+ F M N+ +W+++I Q+G A +ALE+F M ++ + P+ +T V
Sbjct: 199 CGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASV 258
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
+ AC + +G + + + + + + D+ A+ + EA MP +
Sbjct: 259 VSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLR 317
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 59/151 (39%), Gaps = 33/151 (21%)
Query: 229 DETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLF 288
D + +L +C + + +H ++I+ + L+D Y KCG AR +F
Sbjct: 18 DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77
Query: 289 SRMEEINVWT-------------------------------WSAMILGLAQHGYAEEALE 317
RM + N ++ W+AM+ G AQH EEAL
Sbjct: 78 DRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALR 137
Query: 318 LFSNMKNSSISPNYVTFLGVLCACNHAGMVE 348
F +M + N +F L AC AG+ +
Sbjct: 138 FFVDMHSEDFVLNEYSFGSALSAC--AGLTD 166
>gi|147838430|emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera]
Length = 978
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 157/453 (34%), Positives = 253/453 (55%), Gaps = 11/453 (2%)
Query: 58 NDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPRE-AVWV 116
++ I ++L+ FC +S S +L YA+ + N P WN++IRG++ S P + V
Sbjct: 428 HNPSISEKLLNFCAVSVSGSLAYAQLVFHRIHNPQTP-AWNSMIRGFSQSPSPLQLQAIV 486
Query: 117 FID--MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFY 174
F + + +P +T+ F+LKAC E + +V + + G D DV NL+R Y
Sbjct: 487 FYNHMLSASHARPDTYTFSFLLKACEEAKEEGKCREVHGFIIRFGYDQDVVLCTNLIRSY 546
Query: 175 GSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK--DLGFEPDETT 232
A KVF++M R +VSWN +I+ + EA+ + +M+ ++GF D T
Sbjct: 547 AGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGF--DGFT 604
Query: 233 MLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME 292
++ +LS+C +G L +G +H ER V N +G ALIDMYAKCG++ A +F+ M
Sbjct: 605 LVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNALIDMYAKCGSLASALSIFNSMP 664
Query: 293 EINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR 352
+ +V+TW++MI+G HG +EA+ F +M + + PN +TFLG+LC C+H G+V++G +
Sbjct: 665 KRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQGLVKEGVQ 724
Query: 353 YFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
YFH M +KP HY M D+ RAG LKEA I + P Q +P++ R LL + IH
Sbjct: 725 YFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGSCKIH 784
Query: 413 DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKG 472
+G R L++L G+ + V+++ YAE + V+ +R+ +++ G+K G
Sbjct: 785 ---RNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSRGIKTTPG 841
Query: 473 MSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
SW+E+G +HRF S + IY+ LE +
Sbjct: 842 WSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEV 874
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 170/489 (34%), Positives = 249/489 (50%), Gaps = 42/489 (8%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW 97
C + K +I +Q+ ++G +D L++F T S L Y+ I + + +S W
Sbjct: 39 CHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIF-DRIENSNGFMW 97
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N ++R Y S+ +A+ ++ M + + P +TYP V++ACA G ++ +V K
Sbjct: 98 NTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLK 157
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFD----------------------------- 188
G DSDVY N L+ Y C RDA K+FD
Sbjct: 158 VGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEA 217
Query: 189 -----DMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
+M E+ +VSW+ +I+ +N EA+ F++M G DE ++ VLSAC L
Sbjct: 218 WKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHL 277
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALI----DMYAKCGAVGCARLLFSRMEEINVWTW 299
+ GK +H +I G L ALI DMY KCG V A +F+ MEE V +W
Sbjct: 278 SIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSW 337
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+A+I+GLA +G E +L++FS MKN+ + PN +TF+GVL AC H G+V++G +F M
Sbjct: 338 NALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIE 397
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
HGI+P HY M D+L RAG L EA I +MP P+ ALL A H
Sbjct: 398 KHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHG---DTE 454
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
+G V R+L+EL+P V+++N +A G WE V VR MK G+ K G S +E
Sbjct: 455 MGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEAN 514
Query: 480 GSIHRFYSG 488
G +H F +G
Sbjct: 515 GVVHEFLAG 523
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 171/503 (33%), Positives = 249/503 (49%), Gaps = 44/503 (8%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIH+ I S +D I LV S N+ A+ + + + D + WN+LI Y
Sbjct: 173 QIHSLIAKSPCLSDVYIGSALVDM--YSKCGNVNDAQQVF-DEMGDRNVVSWNSLITCYE 229
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK-SGLDSDV 164
+ EA+ VF M ++P E T V+ ACA +S + G +V A V K L +D+
Sbjct: 230 QNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDI 289
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDM-------------------------------CER 193
+N V Y C R ++A +FD M ER
Sbjct: 290 ILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAER 349
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
+VVSWN +I +N EA+ F +K P T +L AC +L +L LG H
Sbjct: 350 NVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAH 409
Query: 254 LQLIERGTVLNCQ------LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA 307
+ +++ G +G +LIDMY KCG V L+F +M E + +W+AMI+G A
Sbjct: 410 VHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFA 469
Query: 308 QHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
Q+GY EALELF M +S P+++T +GVL AC HAG VE+G YF M G+ P+R
Sbjct: 470 QNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLR 529
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRR 427
HY M D+L RAG L+EA + I MP QP+ ++ +LL+A +H +G V +
Sbjct: 530 DHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVH---RNITLGKYVAEK 586
Query: 428 LLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYS 487
L E+E S V+++N YAE+G W NVR+ M+ G+ K G SW+++ G H F
Sbjct: 587 LFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWIKIPGHAHVFMV 646
Query: 488 GYDSQVELAGIYQILETLNLHMK 510
S I+ +L+ L M+
Sbjct: 647 KDKSHPRKKQIHSLLDILIAEMR 669
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 184/378 (48%), Gaps = 44/378 (11%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN+++ G+A DR EA++ F M + G E+T+ L AC+ ++ +N G+Q+ + +
Sbjct: 120 WNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIA 179
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
KS SDVY + LV Y C DA +VFD+M +R+VVSWN +IT +N EA+
Sbjct: 180 KSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALK 239
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN-CQLGTALIDMY 275
F M + EPDE T+ V+SAC L + +G+ VH ++++ + N L A +DMY
Sbjct: 240 VFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMY 299
Query: 276 AKC-------------------------------GAVGCARLLFSRMEEINVWTWSAMIL 304
AKC + ARL+F++M E NV +W+A+I
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 305 GLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN-----HAGMVEDGYRYFHEMEH 359
G Q+G EEAL LF +K S+ P + TF +L AC H GM + H +
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKF 419
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
G + +++ D+ + G ++E Y M + R +S +++ Q+G
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-------MERDCVSWNAMIIGFAQNG 472
Query: 420 VGNEVRRRLLELEPRGSQ 437
GNE E+ G +
Sbjct: 473 YGNEALELFREMLDSGEK 490
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 138/289 (47%), Gaps = 32/289 (11%)
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT------- 203
V A+V KSG ++V+ N L+ Y C D ++FD M +R+V +WN ++T
Sbjct: 42 VHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGF 101
Query: 204 ---------------VCVENLWLG---------EAVGYFVKMKDLGFEPDETTMLVVLSA 239
C N + EA+ YF M GF +E T LSA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSA 161
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C+ L +++ G +H + + + + +G+AL+DMY+KCG V A+ +F M + NV +W
Sbjct: 162 CSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSW 221
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+++I Q+G A EAL++F M S + P+ VT V+ AC ++ G +
Sbjct: 222 NSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVK 281
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
+ ++ I + D+ A+ +KEA +MP + N I +++S
Sbjct: 282 MDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR-NVIAETSMVSG 329
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 236 VLSACTELGNLSLG-KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI 294
+L +C +L ++ + VH +I+ G + LID YAKCG++ R LF +M +
Sbjct: 25 LLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQR 84
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNM 322
NV+TW++++ GL + G+ +EA LF +M
Sbjct: 85 NVFTWNSVVTGLTKLGFLDEADSLFRSM 112
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 167/504 (33%), Positives = 255/504 (50%), Gaps = 41/504 (8%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H + +D +L L+ F +L Y + N + + WN+++ G+
Sbjct: 262 VHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDI-VSWNSMVTGFVQ 320
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG-----------MQVQANV 155
P +A+ +F M+ G+ P T V+ ACA+ L G M + NV
Sbjct: 321 GGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNV 380
Query: 156 TKSGLD--------------------SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSV 195
+ +D DV + ++ Y A +FD M + +
Sbjct: 381 CNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDI 440
Query: 196 VSWNVIITVCVENLWLGEAVGYF--VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
+WNV+I+ ++ EA+ F +++ G PD+ T+L LSAC +LG + +G+W+H
Sbjct: 441 PAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIH 500
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
+ + LN L T+LIDMY+K G V A +F + +V+ WSAMI GLA HG E
Sbjct: 501 GYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGE 560
Query: 314 EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
A+ELF +M+ + + PN VTF +LCAC+H+G+V++G R F EME V+G+ P HY M
Sbjct: 561 AAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCM 620
Query: 374 ADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP 433
D+L RAGHL+EA FI MP P+ V ALL A IH + + RLLE+EP
Sbjct: 621 VDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLE---LAEKACSRLLEIEP 677
Query: 434 RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQV 493
V+++N YA+ G WE VS +R+ M++ GLKK G S +E+ G++H F G ++
Sbjct: 678 GNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHP 737
Query: 494 ELAGIY----QILETLNLHMKVLN 513
IY +I+ L H V N
Sbjct: 738 LSRDIYAKLDEIMARLRSHGYVAN 761
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/401 (31%), Positives = 189/401 (47%), Gaps = 60/401 (14%)
Query: 33 SFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDS 92
+ + C S K L QIHAQ+ + +D EL SS L YAR + D
Sbjct: 144 ALFQQCTSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVF-----DQ 198
Query: 93 VPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEISGLNE 147
+P P WN LIR A S P ++V VFI M P +FT+P ++KA AE
Sbjct: 199 IPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLV 258
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE---RSVVSWNVIITV 204
G V K+ DV+ N+L+ FY SC A VF +M E + +VSWN ++T
Sbjct: 259 GKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVF-EMIEGNNKDIVSWNSMVTG 317
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
V+ + +A+ F +M++ G P+ TM+ V+SAC + NL+LG+ V + ++N
Sbjct: 318 FVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMN 377
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINV--WT------------------------ 298
+ A IDM+ KCG V AR LF ME+ +V WT
Sbjct: 378 LNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPR 437
Query: 299 -----WSAMILGLAQHGYAEEALELFSNMK--NSSISPNYVTFLGVLCACNHAGMVEDGY 351
W+ +I G Q G +EAL +F ++ S P+ VT L L AC G ++ G
Sbjct: 438 KDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIG- 496
Query: 352 RYFHEMEHVHG-IKPMRIHYH-----TMADILARAGHLKEA 386
E +HG IK RI + ++ D+ +++G +++A
Sbjct: 497 ------EWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKA 531
>gi|357133503|ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Brachypodium distachyon]
Length = 554
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 165/513 (32%), Positives = 266/513 (51%), Gaps = 45/513 (8%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
++ L+ C S + L ++HA L + + ++V C ++ + +A +
Sbjct: 17 MASLRACASFRDLLRVHAHAVRLSLSQSSYLATQIVHLC--NAHGRVAHATRVFSQVREP 74
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKP-------TEFTYPFVLKACAEISG 144
++ + N +I+ YA + R +A+ V+I M RR P FTYPF+LKAC +
Sbjct: 75 NLHLH-NAMIKAYAQNHRHLDAITVYIRMLRRRPFPWISCTGGDRFTYPFLLKACGGLMA 133
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L+ G QV +V +SG +S+ N+L+ Y A KVFD M ER VVSWN +I+
Sbjct: 134 LDLGKQVHGHVVRSGCESNAIVQNSLIEMYTRAGDLVLARKVFDGMQERDVVSWNTVISA 193
Query: 205 -----------CVENL--------WLGEAVGY------------FVKMKDLGFEPDETTM 233
V N W GY F M+ GFEPD+ ++
Sbjct: 194 HARLGQMRKARAVFNSMPDKTVVSWTALVSGYTAAGDFSGAVEAFRLMQMEGFEPDDVSI 253
Query: 234 LVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEE 293
+ VL AC +LG L LG+W++ + + AL++MYAKCG + A LF+ M E
Sbjct: 254 VAVLPACAQLGALELGRWIYAYCNRHQMLRETYVCNALVEMYAKCGCIDQALQLFNGMAE 313
Query: 294 INVWTWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGMVEDGYR 352
+V +WS M+ GLA HG A+EA++LF+ M + ++ PN +TF+G+L AC+HAG++++G
Sbjct: 314 KDVISWSTMVGGLAAHGRAQEAVQLFTEMERQGTVKPNGITFVGLLSACSHAGLLDEGLD 373
Query: 353 YFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
YF M V+GI+P HY + D+L R+G ++ I +MP + + ++L+A H
Sbjct: 374 YFDRMNDVYGIEPGVEHYGCIVDLLCRSGQIQRTLDLISDMPLPADAKIWGSVLNACRSH 433
Query: 413 DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKG 472
+ E RL+ LEP NLV++AN YA W +V+N R+ +++ ++K G
Sbjct: 434 GDVDTAVLAAE---RLVALEPEDVGNLVMLANVYAAARRWSEVANTRKAIRSRSMRKTPG 490
Query: 473 MSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
S +E+ + F +G D + E G+ +L+ L
Sbjct: 491 CSLIEVDNVVQEFVAGEDLKPEFGGLSGVLDIL 523
>gi|449439631|ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 175/526 (33%), Positives = 266/526 (50%), Gaps = 56/526 (10%)
Query: 26 SKARQ--CLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARS 83
S+ RQ S LK C S ++L + HAQI VSG IL L+ S +L A+
Sbjct: 23 SRVRQQFIFSVLKSCVSFRNLAKTHAQIVVSGFSQKNYILNHLLSLYI--SFGSLGSAQK 80
Query: 84 ILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS 143
+ + S + WN +I+G+ S ++++ +F M G++ FTY F+L AC
Sbjct: 81 VFEDITAPSTTV-WNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSR 139
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFY----------------------------- 174
EG Q+ V +G S++Y NL+ Y
Sbjct: 140 LFREGEQIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRALYLFDEMPDSNVVGW 199
Query: 175 -----GSCRRKR--DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
G RR A KVFD+M ER+V +W +++ +N A+ F +M+ G E
Sbjct: 200 NSLLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVE 259
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERG------TVLNCQLGTALIDMYAKCGAV 281
D+ ++ LSAC ELG+L+LGKW+H +ER VL L ALI MYA CGA+
Sbjct: 260 LDQVALVAALSACAELGDLTLGKWIH-GYVERTWRSRHLPVL-VSLNNALIHMYASCGAM 317
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM---KNSSISPNYVTFLGVL 338
A LF + + N +WS++I G A+ G EA+ +F M + + P+ +TF+G L
Sbjct: 318 DLAYKLFEEIPQRNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGAL 377
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
AC+HAG++ DG R F M G+ P HY M D+L+RAG L EA + I +MP +PN
Sbjct: 378 TACSHAGLISDGIRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPN 437
Query: 399 PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP--RGSQNLVIVANKYAEVGMWEKVS 456
V ALLS +H K + V + + E++P + + +++AN YA G W+ +
Sbjct: 438 NAVWGALLSGCRLH--KNDEIVSHVAKHLSFEIDPNNQAAGYFMLLANVYAADGRWQDTA 495
Query: 457 NVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQIL 502
VRR M ++G+KK G SW+E+ G + F G ++ ++ IY++L
Sbjct: 496 TVRRNMHDIGVKKPSGRSWIEINGVLCSFMVGEETHKDVNLIYEML 541
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 238/472 (50%), Gaps = 39/472 (8%)
Query: 78 LTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLK 137
L AR L + + + + + WN +I GY EA+ +F M GI+ EFTY VL
Sbjct: 241 LDAARQFL-DGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLS 299
Query: 138 ACAEISGLNEGMQVQANVTKS----GLDSDVYTNNNLVRFYGSCRRKRDACKVF------ 187
ACA G QV A + ++ LD + NN L Y C + +A +VF
Sbjct: 300 ACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVK 359
Query: 188 -------------------------DDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
++M ER++++W V+I+ +N + E++ F +MK
Sbjct: 360 DLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMK 419
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
GFEP + + AC L L G+ +H QL+ G + G ALI MYAKCG V
Sbjct: 420 SEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVE 479
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
A LF M ++ +W+AMI L QHG+ +ALELF M I P+ +TFL VL C+
Sbjct: 480 AAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCS 539
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVL 402
HAG+VE+G+RYF M ++GI P HY M D+L RAG EA I MP +P P +
Sbjct: 540 HAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIW 599
Query: 403 RALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFM 462
ALL+ IH +G + RL EL P+ V+++N YA VG W+ V+ VR+ M
Sbjct: 600 EALLAGCRIHG---NMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLM 656
Query: 463 KNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
++ G+KK G SW+E+ +H F E+ +Y LE L L M+ L +
Sbjct: 657 RDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGY 708
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 173/419 (41%), Gaps = 83/419 (19%)
Query: 73 SSSKNLTYARSILCNY---VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTE 129
SS+ N AR I + D+V +N +I GY+ ++ A+ +F D+ R G +P
Sbjct: 92 SSAGNSNLAREIFFATPLGIRDTVC--YNAMITGYSHNNDGFGAIELFRDLLRNGFRPDN 149
Query: 130 FTYPFVLKACAEI-SGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRD------ 182
FT+ VL A A I + Q+ V KSG N L+ + C
Sbjct: 150 FTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSL 209
Query: 183 ---ACKVFDDMCERS-------------------------------VVSWNVIITVCVEN 208
A K+FD+M ER VV+WN +I+ V +
Sbjct: 210 MAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHH 269
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE---RGTV-LN 264
+ EA+ F KM LG + DE T VLSAC G GK VH ++ R ++ +
Sbjct: 270 GFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFS 329
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSR-------------------------------MEE 293
+ AL +Y KCG V AR +F++ M E
Sbjct: 330 LSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPE 389
Query: 294 INVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRY 353
N+ TW+ MI GLAQ+G+ EE+L+LF+ MK+ P F G + AC + G R
Sbjct: 390 RNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHG-RQ 448
Query: 354 FHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
H G + + + A+ G ++ A+ + MP+ + + A+++A H
Sbjct: 449 LHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYL-DSVSWNAMIAALGQH 506
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 17/252 (6%)
Query: 76 KNLTYARSILCNYVN-----------DSVP----IPWNNLIRGYAWSDRPREAVWVFIDM 120
K+L +IL YVN + +P + W +I G A + E++ +F M
Sbjct: 359 KDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRM 418
Query: 121 KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRK 180
K G +P ++ + + ACA ++ L G Q+ A + + G DS + N L+ Y C
Sbjct: 419 KSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVV 478
Query: 181 RDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
A +F M VSWN +I ++ +A+ F M PD T L VLS C
Sbjct: 479 EAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTC 538
Query: 241 TELGNLSLG-KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWT 298
+ G + G ++ G +ID+ + G A+ + M E
Sbjct: 539 SHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPI 598
Query: 299 WSAMILGLAQHG 310
W A++ G HG
Sbjct: 599 WEALLAGCRIHG 610
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 142/395 (35%), Gaps = 84/395 (21%)
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII-------- 202
V A++ SG Y N L+ Y A +FD++ + +V+ +I
Sbjct: 37 VHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGN 96
Query: 203 -----------------TVCVENLWLG-----EAVGYFVKMKDL---GFEPDETTMLVVL 237
TVC + G + G +DL GF PD T VL
Sbjct: 97 SNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVL 156
Query: 238 SACTEL-GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA---------VGCARLL 287
A + + + +H +++ G+ + AL+ ++ KC + + AR L
Sbjct: 157 GALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKL 216
Query: 288 FSRMEEIN--VWT-----------------------------WSAMILGLAQHGYAEEAL 316
F M E + WT W+AMI G HG+ EAL
Sbjct: 217 FDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEAL 276
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG---YRYFHEMEHVHGIKPMRIHYHTM 373
E+F M I + T+ VL AC +AG G + Y E + + +
Sbjct: 277 EMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNAL 336
Query: 374 ADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP 433
A + + G + EA MP ++ L+S ++I G +E + E+
Sbjct: 337 ATLYWKCGKVDEARQVFNQMP-------VKDLVSWNAILSGYVNAGRIDEAKSFFEEMPE 389
Query: 434 RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLK 468
R ++ + A+ G E+ + MK+ G +
Sbjct: 390 RNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFE 424
>gi|225437286|ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 468
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 166/460 (36%), Positives = 246/460 (53%), Gaps = 21/460 (4%)
Query: 27 KARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILC 86
+ + L+ L CCS H++QI AQ+ V L ++ I + C ++L S L
Sbjct: 10 RVTKFLNLLTNCCSPCHIHQIQAQLIVQNLHSNTTIAHHFITAC-----QSLGLLDSALL 64
Query: 87 NYVNDSVPIPW--NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
+ + S P + N+LIR ++ + P ++ M I P FT+PF+LK+ A+ G
Sbjct: 65 LFTHHSKPHVFICNSLIRAFSHNHTPHTPFSIYTHMHSNSILPNNFTFPFLLKSLADFKG 124
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L+EG + +V K G D+Y N+L+ Y SC +VFD+M R VVSW V+IT
Sbjct: 125 LSEGQCIHTHVVKLGQFDDIYVQNSLLNVYASCGDMGLCMRVFDEMPHRDVVSWTVLITG 184
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
+A+ F +M+ G P+ TM+ LSAC + G L +G W+H + G +
Sbjct: 185 YRSAERYDDALIAFEQMQYAGVVPNHVTMVNALSACADFGALEMGVWIHEFIRRSGWEFD 244
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
LGT+LIDMY KCG + ++F M+E NV+TW+++I GLA EA+ F M+
Sbjct: 245 VILGTSLIDMYGKCGRIEEGLVVFRSMKEKNVFTWNSLIKGLALARSGAEAVWWFYRMEQ 304
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM-----EHVHGIKPMRIHYHTMADILAR 379
I + VT + VLCAC+H+GMV+ G + F + E G+K HY + D+LAR
Sbjct: 305 EGIKADEVTLIAVLCACSHSGMVQMGRQIFGSLMNGKYEFFPGVK----HYACVIDLLAR 360
Query: 380 AGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQN 438
AG L+EA + MPF+PN ++ A L+ H D + + R+L+ELEP
Sbjct: 361 AGILQEAMEVMTRMPFEPNKVMWGAFLAGCRAHGDLELSEFAA----RKLVELEPGNGAY 416
Query: 439 LVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVEL 478
V+++N YAE+G W V VRR MK GL K G S +EL
Sbjct: 417 YVLLSNIYAEMGRWSDVEKVRRLMKEGGLTKDLGCSSIEL 456
>gi|125540774|gb|EAY87169.1| hypothetical protein OsI_08570 [Oryza sativa Indica Group]
Length = 613
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 155/448 (34%), Positives = 234/448 (52%), Gaps = 17/448 (3%)
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDR-----PREAVWVFIDMKRRGIKPTEFT 131
++ YA SI ++D +N L+RGY P A+ +F+DM G++P +T
Sbjct: 82 SMAYAASIFAA-LDDPEAFDYNTLMRGYVAGGGGGGRDPAAALRLFVDMVDDGVEPDSYT 140
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM- 190
+PFV KACA++ L EG Q+Q ++ K G D ++ N+L+ FYG C A + F+ M
Sbjct: 141 FPFVFKACAQLGALQEGRQLQGHLVKLGFQRDEHSQNSLISFYGKCGEADLARRAFEQME 200
Query: 191 -CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
E++ SW+ ++ E V F M G+ PDE++M+ LSAC LG +G
Sbjct: 201 DDEQTTASWSALLAAYTRAGRWAECVESFGAMVRAGWRPDESSMVSALSACAHLGAHDVG 260
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
+ +H L+ LN + T+L+DMYAKCG + A +F M++ N WT+SAM+ GLA H
Sbjct: 261 RSIHCALLRNTARLNTFMSTSLVDMYAKCGCIENAAAVFDAMDDKNAWTYSAMVSGLALH 320
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIH 369
G +ALE+F M P+ ++GVL AC+ AG++E+G R F M H + P H
Sbjct: 321 GDGRKALEVFDAMVREGHRPDAAVYVGVLNACSRAGLLEEGLRCFDRMRLEHKLTPNAQH 380
Query: 370 YHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLL 429
Y M D++ARAG L +A I NMP P R+LL+A IH G R L
Sbjct: 381 YGCMVDLMARAGRLDDARALIGNMPTGPTDTAWRSLLNACRIH------GNLELAERALQ 434
Query: 430 ELEPRGSQNL---VIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFY 486
ELE G+ N +I+++ +A + + R + GL + G S VE+ G+ HRF
Sbjct: 435 ELERLGATNAGDYIILSDMHARAHNRDAAAARRTEAVDRGLAQAPGYSAVEVHGATHRFV 494
Query: 487 SGYDSQVELAGIYQILETLNLHMKVLNF 514
S S IY++L + ++ +
Sbjct: 495 SQDRSHPRADDIYEMLHQMEWQLRFEGY 522
>gi|413932592|gb|AFW67143.1| hypothetical protein ZEAMMB73_912965 [Zea mays]
Length = 619
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 179/515 (34%), Positives = 267/515 (51%), Gaps = 20/515 (3%)
Query: 5 PVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILK 64
P P + P++C + + + CL L+ + + Q A + SGL + +L
Sbjct: 21 PSPLLHRTGLSPPADCGAR--AAEQHCLHLLERSSAPAAVLQSLAFLLKSGLHANPLVL- 77
Query: 65 ELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW---NNLIRGYAWSDRPR---EAVWVFI 118
R S++ ++ + SVPI N LIR +A S P A F
Sbjct: 78 --TRLFASSAAAAPALLEPLVAALLVPSVPIDAFLANTLIRAHAASPLPSARLRAASFFP 135
Query: 119 DMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCR 178
M R P +FT+PF+LKACA G+ G+Q A K G +D Y +N L+ Y SC
Sbjct: 136 LMLRSATLPNKFTFPFLLKACAAFPGV--GVQAHAAALKFGFTTDQYVSNTLIHMY-SCF 192
Query: 179 RKR---DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLV 235
DA VFD M + S V+W+ +I V + +AVG F +M+ G PDE TM+
Sbjct: 193 GGEFLGDARNVFDRMAKSSAVTWSAMIGGYVRSGLSSDAVGLFREMQASGVRPDEVTMIG 252
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
VL+A +LG L L +WV + + G + L ALID AKCG + A +F M+E
Sbjct: 253 VLAAAADLGALELARWVGRFVEKEGIGKSVTLCNALIDALAKCGDLDGAMAVFQGMKERT 312
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
+ +W+++I LA G +EA+ +F MK + + P+ V F+GVL AC+HAGMV++GY YF
Sbjct: 313 IVSWTSVIDALAMEGRGKEAVAVFEEMKTAGVRPDDVAFIGVLTACSHAGMVDEGYGYFE 372
Query: 356 EMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAK 415
M +GI P HY M D+ RAG ++ A F+ MP +PNPI+ R L++A H
Sbjct: 373 SMRMAYGIDPKIEHYGCMVDMFGRAGMVERAMEFVHKMPMKPNPIIWRTLVAACRAHG-- 430
Query: 416 YQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSW 475
+ +G + R LL P N V+++N YA W++ S +RR M G+KK+ G S
Sbjct: 431 -RLELGETITRNLLNEYPAHEANYVMLSNVYALTRRWKEKSEIRREMSKRGIKKVPGCSL 489
Query: 476 VELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
VEL G +H F +G +S + IY ++E + ++
Sbjct: 490 VELDGEVHEFIAGDESHPQWKEIYMMVEEMARELR 524
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 181/527 (34%), Positives = 279/527 (52%), Gaps = 48/527 (9%)
Query: 29 RQCLSFLKLCCSK---KHLYQIHAQIQVSGLQN-DAQILKELVRFCTLSSSK-NLTYARS 83
R+ + L C ++ + L++I AQI S + + D I+ V+F +SSS NL ++
Sbjct: 22 RKTIHLLLRCATQLSMRQLFEIQAQIIASPIPSIDPNIIA--VKFIGVSSSHGNLRHSVL 79
Query: 84 ILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFID--MKRRGIKPTEFTYPFVLKACAE 141
I ++++ +N L++ ++ + + F + + P E+T+ VLKACA
Sbjct: 80 IFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAG 139
Query: 142 ISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVI 201
++ + EG +V VTK G +S+++ N+LV Y A K+FD+M R VVSWN +
Sbjct: 140 LAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTL 199
Query: 202 IT-VCVENL------------------W------------LGEAVGYFVKMK-DLGFEPD 229
I+ C + W +A+ F +M+ + G P+
Sbjct: 200 ISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPN 259
Query: 230 ETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNCQLGTALIDMYAKCGAVGCARLLF 288
+ T++ VLSAC LG L LGKW+H + I R + + LG AL DMYAKCG V A+ +F
Sbjct: 260 DVTLVSVLSACAHLGALDLGKWIH-RFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVF 318
Query: 289 SRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVE 348
M E +V +WS +I+GLA +GYA EA F+ M + PN ++F+G+L AC HAG+V+
Sbjct: 319 HEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVD 378
Query: 349 DGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
G YF M V+GI P HY + D+L+RAG L +A + I +MP QPN IV ALL
Sbjct: 379 KGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGG 438
Query: 409 SSIHDAKYQDGV-GNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGL 467
I Y+D G V R+LEL+ S +LV +AN YA +G + ++ R M++
Sbjct: 439 CRI----YKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKS 494
Query: 468 KKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
K G SW+E+ S++ F+ G S + IY ++ L MKV +
Sbjct: 495 MKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGY 541
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 153/459 (33%), Positives = 258/459 (56%), Gaps = 9/459 (1%)
Query: 44 LYQIHAQIQVSG-LQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIR 102
L +IH G +Q+D + V + +L YA + C + V WN LI
Sbjct: 419 LKEIHGYALRHGFIQSDELVANAFV--AGYAKCGSLHYAEGVFCGMESKMVS-SWNALIG 475
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
G+ + PR+A+ +++ M+ G++P FT +L ACA + L+ G ++ ++ ++G +
Sbjct: 476 GHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFEL 535
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
D + +LV Y C + A FD+M E+++V WN +I +N + +A+ F +M
Sbjct: 536 DEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQML 595
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
PDE +++ L AC+++ L LGK +H ++ + + +LIDMYAKCG +
Sbjct: 596 SSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCME 655
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
++ +F R+ TW+ +I G HG+ +A+ELF +M+N+ P+ VTF+ +L ACN
Sbjct: 656 QSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACN 715
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVL 402
HAG+V +G Y +M+ + GIKP HY + D+L RAG L EA + +P +P+ +
Sbjct: 716 HAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIW 775
Query: 403 RALLSASSIHDAKYQD-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRF 461
+LLS+ Y+D +G +V +LLEL P ++N V+++N YA +G W++V +R+
Sbjct: 776 SSLLSSCR----NYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQR 831
Query: 462 MKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQ 500
MK +GL+K G SW+E+GG + RF G +S ++ I Q
Sbjct: 832 MKEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQ 870
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 168/346 (48%), Gaps = 20/346 (5%)
Query: 26 SKARQCLSFL-KLCCSKKHL---YQIHAQIQVSG-LQNDAQILKELVRFCTLSSSKNLTY 80
SK +Q + L +LC K++ +IH I S QND ++ LV ++ S Y
Sbjct: 90 SKPKQLIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDS---PY 146
Query: 81 ARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVLKAC 139
++ N WN L+ GY + R+AV+VF++M P FT P V+KAC
Sbjct: 147 DSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKAC 206
Query: 140 AEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWN 199
+ + G V K+ + SDV+ N L+ YG A KVFD M +R++VSWN
Sbjct: 207 VGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWN 266
Query: 200 VIITVCVENLWLGEAVGYFVKM--KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLI 257
++ C+EN E+ G F + D G PD TM+ V+ C G + LG H +
Sbjct: 267 SVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLAL 326
Query: 258 ERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALE 317
+ G ++ ++L+DMY+KCG + AR+LF E+ NV +W++MI G ++ A E
Sbjct: 327 KLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTNEK-NVISWNSMIGGYSKDRDFRGAFE 385
Query: 318 LFSNMK-NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
L M+ + N VT L VL C F +++ +HG
Sbjct: 386 LLRKMQMEDKVKVNEVTLLNVLPVCEEE-------IQFLKLKEIHG 424
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 154/410 (37%), Positives = 223/410 (54%), Gaps = 3/410 (0%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN LI G + E++ +F M++ G T VLK+ A + +++ QV A
Sbjct: 374 WNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAE 433
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
K G SD + N L+ Y C R A KVF++ +++++ +IT + +A+
Sbjct: 434 KIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIK 493
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F++M G EPD + +L+AC L GK VH LI+R + + G AL+ YA
Sbjct: 494 LFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYA 553
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KCG++ A L FS + + V +WSAMI GLAQHG+ + AL++F M + I+PN++T
Sbjct: 554 KCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTS 613
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
VLCACNHAG+V++ YF M+ + GI HY M D+L RAG L +A + +MPF+
Sbjct: 614 VLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFE 673
Query: 397 PNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVS 456
N V ALL+AS +H +G +L LEP S V++AN YA GMW++V+
Sbjct: 674 ANAAVWGALLAASRVH---RDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVA 730
Query: 457 NVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
VR+ MK+ +KK MSWVEL +H F G S IY LE L
Sbjct: 731 KVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYAKLEELG 780
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 156/297 (52%), Gaps = 15/297 (5%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILCNYVNDSVPIPWNNLIR 102
IHA + SGL + L+ F C L S AR + + D + W++L+
Sbjct: 25 HIHAHLLKSGLLH--AFRNHLLSFYSKCRLPGS-----ARRVF-DETPDPCHVSWSSLVT 76
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
Y+ + PREA+ F M+ RG++ EF P VLK CA +GL G+QV A +GL
Sbjct: 77 AYSNNALPREALAAFRAMRARGVRCNEFALPIVLK-CAPDAGL--GVQVHAVAVSTGLSG 133
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMC-ERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
D++ N LV YG +A +VFD+ +R+ VSWN +++ V+N +AV F +M
Sbjct: 134 DIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEM 193
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
G P+E V++ACT +L G+ VH ++ G + AL+DMY+K G +
Sbjct: 194 VWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDI 253
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
A L+F ++ + +V +W+A I G HG+ + ALEL MK+S + PN T +L
Sbjct: 254 HMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSIL 310
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 140/321 (43%), Gaps = 10/321 (3%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
++HA + +G D LV + S + +++ V + + WN I G
Sbjct: 223 KVHAMVVRTGYDKDVFTANALV---DMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCV 279
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM--QVQANVTKSGLDSD 163
+ A+ + + MK G+ P FT +LKACA + Q+ + K+ DSD
Sbjct: 280 LHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSD 339
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
Y LV Y DA KVF+ + + ++ WN +I+ C GE++ F +M+
Sbjct: 340 DYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRK 399
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G + + TT+ VL + L +S VH + G + + + LID Y KC +
Sbjct: 400 EGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRY 459
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A +F N+ +++MI L+Q + E+A++LF M + P+ +L AC
Sbjct: 460 ANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACAS 519
Query: 344 AGMVEDGYRYFHEMEHVHGIK 364
E G + H H IK
Sbjct: 520 LSAYEQGKQV-----HAHLIK 535
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 5/266 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HA + G +D+ ++ L+ + L YA + + +D++ I + ++I +
Sbjct: 427 QVHALAEKIGFLSDSHVVNGLID--SYWKCNCLRYANKVFEEHSSDNI-IAFTSMITALS 483
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
D +A+ +F++M R+G++P F +L ACA +S +G QV A++ K +DV+
Sbjct: 484 QCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVF 543
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N LV Y C DA F + ++ VVSW+ +I ++ A+ F +M D
Sbjct: 544 AGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDER 603
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIER-GTVLNCQLGTALIDMYAKCGAVGCA 284
P+ T+ VL AC G + K + E G + + +ID+ + G + A
Sbjct: 604 IAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDA 663
Query: 285 RLLFSRME-EINVWTWSAMILGLAQH 309
L + M E N W A++ H
Sbjct: 664 MELVNSMPFEANAAVWGALLAASRVH 689
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 9/289 (3%)
Query: 125 IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDAC 184
++ E P + + A S L G + A++ KSGL N+L+ FY CR A
Sbjct: 1 MRSPESISPLLTRYAATQS-LFLGAHIHAHLLKSGLLHAF--RNHLLSFYSKCRLPGSAR 57
Query: 185 KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELG 244
+VFD+ + VSW+ ++T N EA+ F M+ G +E + +VL + G
Sbjct: 58 RVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAG 117
Query: 245 NLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM-EEINVWTWSAMI 303
LG VH + G + + AL+ MY G V AR +F + N +W+ M+
Sbjct: 118 ---LGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMM 174
Query: 304 LGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
++ +A+ELF M S + PN F V+ AC + +E G R H M G
Sbjct: 175 SAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAG-RKVHAMVVRTGY 233
Query: 364 KPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
+ + D+ ++ G + A +P + + + A +S +H
Sbjct: 234 DKDVFTANALVDMYSKLGDIHMAALVFGKVP-KTDVVSWNAFISGCVLH 281
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 252/485 (51%), Gaps = 13/485 (2%)
Query: 35 LKLCC---SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LK C S+K +H+ + G +D + L+ + S N + L + + D
Sbjct: 118 LKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHK---LFDEIPD 174
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
+ W L GY S R REA+ +F M G+KP + VL AC + L+ G +
Sbjct: 175 RSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWI 234
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
+ + + + + LV Y C + A VFD M E+ +V+W+ +I N +
Sbjct: 235 VKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFP 294
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQLGTA 270
E + F++M +PD+ +++ LS+C LG L LG+W + LI+R L N + A
Sbjct: 295 KEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEW-GISLIDRHEFLTNLFMANA 353
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
LIDMYAKCGA+ +F M+E ++ +A I GLA++G+ + + +F + ISP+
Sbjct: 354 LIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPD 413
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
TFLG+LC C HAG+++DG R+F+ + V+ +K HY M D+ RAG L +AY I
Sbjct: 414 GSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLI 473
Query: 391 MNMPFQPNPIVLRALLSASS-IHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
+MP +PN IV ALLS + D + + V + L+ LEP + N V ++N Y+
Sbjct: 474 CDMPMRPNAIVWGALLSGCRLVKDTQ----LAETVLKELIALEPWNAGNYVQLSNIYSVG 529
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
G W++ + VR M G+KK+ G SW+EL G +H F + S IY LE L M
Sbjct: 530 GRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEM 589
Query: 510 KVLNF 514
+++ F
Sbjct: 590 RLMGF 594
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 191/383 (49%), Gaps = 5/383 (1%)
Query: 26 SKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
SK +Q + + + C+ HL QIH + L +D ++ L++ +Y +L
Sbjct: 11 SKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSY---LL 67
Query: 86 CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL 145
++ +N+LI G+ + E + +F+ +++ G+ FT+P VLKAC S
Sbjct: 68 FSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSR 127
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
G+ + + V K G + DV +L+ Y R DA K+FD++ +RSVV+W + +
Sbjct: 128 KLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGY 187
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
+ EA+ F KM ++G +PD ++ VLSAC +G+L G+W+ + E N
Sbjct: 188 TTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNS 247
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
+ T L+++YAKCG + AR +F M E ++ TWS MI G A + + +E +ELF M
Sbjct: 248 FVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQE 307
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
++ P+ + +G L +C G ++ G ++ H + + D+ A+ G +
Sbjct: 308 NLKPDQFSIVGFLSSCASLGALDLGEWGISLIDR-HEFLTNLFMANALIDMYAKCGAMAR 366
Query: 386 AYTFIMNMPFQPNPIVLRALLSA 408
+ M + + +++ A +S
Sbjct: 367 GFEVFKEMK-EKDIVIMNAAISG 388
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 146/418 (34%), Positives = 227/418 (54%), Gaps = 7/418 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I + ++ + + +F+ M R ++P +FTY V+KACA LN GM++
Sbjct: 407 VSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGR 466
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ KSG+ D + + LV YG C +A K+ D + E++ VSWN II+ A
Sbjct: 467 IVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENA 526
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
YF +M ++G PD T VL C + + LGK +H Q+++ + + + L+DM
Sbjct: 527 QRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDM 586
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG + +RL+F + + + TWSAMI A HG+ E+A++LF M+ ++ PN+ F
Sbjct: 587 YSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIF 646
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ VL AC H G V+ G YF M+ +G+ P HY M D+L R+ + EA I +M
Sbjct: 647 ISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMH 706
Query: 395 FQPNPIVLRALLSASSIHDAKYQDG--VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMW 452
F+ + ++ R LLS + K Q V + LL+L+P+ S V++AN YA VGMW
Sbjct: 707 FEADDVIWRTLLS-----NCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYANVGMW 761
Query: 453 EKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+V+ +R MKN LKK G SW+E+ +H F G + IY+ L MK
Sbjct: 762 GEVAKIRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMK 819
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 161/321 (50%), Gaps = 10/321 (3%)
Query: 77 NLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
N+ +A+S+ D++P + WN+L+ Y + R+++ +F+ M+ I T+
Sbjct: 87 NMGFAQSLF-----DTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATF 141
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
VLKAC+ I G+QV + G ++DV T + LV Y C++ A ++F +M E
Sbjct: 142 SVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPE 201
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
R++V W+ +I V+N E + F M +G ++T V +C L LG +
Sbjct: 202 RNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQL 261
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H ++ + +GTA +DMYAKC + A +F+ + +++A+I+G A+
Sbjct: 262 HGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQG 321
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
+ALE+F +++ + +S + ++ G L AC+ +G + H + G+ +T
Sbjct: 322 LKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQ-LHGLAVKCGLGFNICVANT 380
Query: 373 MADILARAGHLKEAYTFIMNM 393
+ D+ + G L EA T +M
Sbjct: 381 ILDMYGKCGALVEACTIFDDM 401
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 134/309 (43%), Gaps = 41/309 (13%)
Query: 125 IKPTE-FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDA 183
+ PT+ FT+ +L+ C+ + LN G Q A + + +Y N LV+FY A
Sbjct: 1 MNPTKKFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYA 60
Query: 184 CKVFD-------------------------------DMCERSVVSWNVIITVCVENLWLG 212
KVFD M ER VVSWN +++ + N
Sbjct: 61 FKVFDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNR 120
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
+++ FV+M+ L D T VVL AC+ + + LG VH I+ G + G+AL+
Sbjct: 121 KSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALV 180
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
DMY+KC + A +F M E N+ WSA+I G Q+ E L+LF +M + +
Sbjct: 181 DMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQS 240
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMA----DILARAGHLKEAYT 388
T+ V +C + G + H H +K + + D+ A+ + +A+
Sbjct: 241 TYASVFRSCAGLSAFKLGTQL-----HGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWK 295
Query: 389 FIMNMPFQP 397
+P P
Sbjct: 296 VFNTLPNPP 304
>gi|255578276|ref|XP_002530005.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530484|gb|EEF32367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 499
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 178/504 (35%), Positives = 259/504 (51%), Gaps = 61/504 (12%)
Query: 25 LSKARQCLSFLKL----------CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSS 74
LS +QC L L C S HL QIHA ++ L N + IL +++RF +S
Sbjct: 3 LSVQQQCKPILALASILASIAENCQSMNHLKQIHAHSLLTDLHNHSVILGKMLRFAAVSP 62
Query: 75 SKNLTYARSILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEF 130
S +L YA+ + D +P P +N +IRGYA S P V +F M++ + P EF
Sbjct: 63 SGDLPYAQRLF-----DQMPQPNTFFYNTIIRGYAKSSSPSYCVNLFNQMRQNHVDPDEF 117
Query: 131 TYPFVLKACAEISGLN------EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDAC 184
T+ F++KA + + ++ E ++ V K G S ++ N L+ Y A
Sbjct: 118 TFNFLIKARSRVHKVHNFPSTLECDEIHGAVFKYGFCSHLFVQNALINLYAVKGSPAAAW 177
Query: 185 K-------------------------------VFDDMCERSVVSWNVIITVCVENLWLGE 213
+ VFDDM E+ VVSW +++ + E
Sbjct: 178 RVFNETVGVDVVSWSGLVLAHVRGGELELARQVFDDMPEKDVVSWTAMVSGYSKANCSRE 237
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
A+ F +M D G PDE T++ V+SACT LG++ G VH + E G L ALI+
Sbjct: 238 ALELFWEMSDAGIRPDEVTIVSVISACTNLGDVETGMNVHSYINENGFGWMVSLCNALIN 297
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MYAKCG V A +F+ M+ ++ TW++MI A HGYAE+A ELFS M NS I+P+ +T
Sbjct: 298 MYAKCGCVDRAWRVFNNMKRKSLITWNSMISACANHGYAEDAFELFSCMLNSGIAPDGIT 357
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
FL +L A H G+V++GYR F ME +GI+ HY + D+L RAG L+EAY I+ M
Sbjct: 358 FLALLIAYTHKGLVDEGYRLFQIMERDYGIEASIEHYGCIVDMLGRAGRLEEAYELIVTM 417
Query: 394 PFQPNPIVLRALLSASSIHDAKYQD-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMW 452
P N IV ALL+A I Y D +G V ++LLEL+P +++ + Y G
Sbjct: 418 PIPSNDIVWGALLAACRI----YGDVNMGERVVKKLLELKPDEGGYYILLRDIYVASGRT 473
Query: 453 EKVSNVRRFMKNVGLKKMKGMSWV 476
+ +++R+ M+ G K G SWV
Sbjct: 474 AEANHIRQAMQESGAMKNPGYSWV 497
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 160/470 (34%), Positives = 249/470 (52%), Gaps = 8/470 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYAR-SILCNYVNDSVPIPWNNLIRGY 104
Q+H Q V G+ + + +LV F + + + Y +C V DSV W+ ++ G+
Sbjct: 756 QVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMC--VRDSVS--WSVMVGGF 811
Query: 105 AWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDV 164
A F ++ R G +P +T PFV++AC ++ L G + V K GLD D
Sbjct: 812 AKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDH 871
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL 224
+ LV YG CR DA +FD M ER +V+W V+I E E++ F KM++
Sbjct: 872 FVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREE 931
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCA 284
G PD+ M+ V+ AC +LG + + + + + L+ LGTA+IDM+AKCG V A
Sbjct: 932 GVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESA 991
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA 344
R +F RMEE NV +WSAMI HG +AL+LF M S I PN +T + +L AC+HA
Sbjct: 992 REIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHA 1051
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRA 404
G+VE+G R+F M + ++ HY + D+L RAG L EA I +M + + + A
Sbjct: 1052 GLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGA 1111
Query: 405 LLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKN 464
L A H + + LLEL+P+ + ++++N YA G WE V+ +R M
Sbjct: 1112 FLGACRTHK---DVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQ 1168
Query: 465 VGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
LKK+ G +W+E+ H+F G + IY++L++L ++++ +
Sbjct: 1169 RRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGY 1218
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/485 (33%), Positives = 256/485 (52%), Gaps = 10/485 (2%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYAR-SILCNYVN 90
+S L C + + Q+HAQ V G+ + + +L+ F + + + Y +C V
Sbjct: 66 ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMC--VR 123
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
DSV W+ ++ G+A F ++ R G +P +T PFV++AC ++ L G
Sbjct: 124 DSVS--WSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRL 181
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+ V K GLD D + LV Y CR DA +FD M ER +V+W V+I E
Sbjct: 182 IHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGK 241
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
E++ F KM++ G PD+ M+ V+ AC +LG + + + + + L+ LGTA
Sbjct: 242 ANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTA 301
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
+IDMYAKCG V AR +F RMEE NV +WSAMI HG +AL+LF M +S + P+
Sbjct: 302 MIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPD 361
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
+T +L AC+HAG+VE+G R+F M + ++ HY + D+L RAG L EA I
Sbjct: 362 KITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLI 421
Query: 391 MNMPFQPNPIVLRALLSASSIHDAKYQDGV-GNEVRRRLLELEPRGSQNLVIVANKYAEV 449
+M + + + A L A H +D V + LLEL+ + + V+++N YA
Sbjct: 422 KSMTIEKDEGLWGAFLGACRTH----KDVVLAEKAATSLLELQSQNPGHYVLLSNIYANA 477
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
G WE V+ +R M LKK G +W+E+ H+F G + IY++L++L+ +
Sbjct: 478 GRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLSNKL 537
Query: 510 KVLNF 514
+++ +
Sbjct: 538 ELVGY 542
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 137/282 (48%), Gaps = 8/282 (2%)
Query: 134 FVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER 193
F + A L + QV A + G+ ++ N L+ FY R DA +FD MC R
Sbjct: 64 FYISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVR 123
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDL---GFEPDETTMLVVLSACTELGNLSLGK 250
VSW+V++ + +G+ + F ++L G PD T+ V+ AC +L NL +G+
Sbjct: 124 DSVSWSVMVGGFAK---VGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGR 180
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
+H + + G L+ + AL+DMY KC + AR LF +M+E ++ TW+ MI G A+ G
Sbjct: 181 LIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECG 240
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
A E+L LF M+ + P+ V + V+ AC G + R + + I
Sbjct: 241 KANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKA-RIIDDYIQRKKFQLDVILG 299
Query: 371 HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
M D+ A+ G ++ A M + N I A+++A H
Sbjct: 300 TAMIDMYAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYH 340
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 145/439 (33%), Positives = 243/439 (55%), Gaps = 7/439 (1%)
Query: 73 SSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
S NL A + + D+ + W + I Y +A+ +F +M+ +G++P +T
Sbjct: 617 SKCGNLNGATEVFVK-MGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTV 675
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
++ ACA S L++G V + V K+G+ S++ N L+ Y C +A VF +
Sbjct: 676 TSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPV 735
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
+ +VSWN +I +N EA+ F+ M+ F+PD+ TM VL AC L L G+ +
Sbjct: 736 KDIVSWNTMIGGYSQNSLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALDKGREI 794
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H ++ RG + + AL+DMYAKCG + A+LLF + + ++ +W+ MI G HG+
Sbjct: 795 HGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFG 854
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
EA+ F+ M+ + I P+ +F +L AC+H+G++ +G+++F+ M + G++P HY
Sbjct: 855 NEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYAC 914
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSI-HDAKYQDGVGNEVRRRLLEL 431
+ D+LAR G+L +AY FI +MP +P+ + LLS I HD K + +V + EL
Sbjct: 915 VVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVK----LAEKVAEHIFEL 970
Query: 432 EPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDS 491
EP ++ V++AN YAE WE+V +R+ M+ G K+ G SW+E+GG + F +G
Sbjct: 971 EPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSK 1030
Query: 492 QVELAGIYQILETLNLHMK 510
+ I +L L + M+
Sbjct: 1031 HPQAKRIDVLLRKLTMQMQ 1049
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 201/414 (48%), Gaps = 14/414 (3%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S L+LC KK L ++H+ I +G+ D + +LV + +L R I +
Sbjct: 374 SVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFM--YVNCGDLVQGRKIFDKIM 431
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
ND V + WN L+ YA RE+V +F M++ G+ +T+ VLK A + + E
Sbjct: 432 NDKVFL-WNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECK 490
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
+V V K G S+ N+L+ Y A +FD++ E VVSWN +I CV N
Sbjct: 491 RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNG 550
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+ G + F++M LG E D TT++ VL A +GNLSLG+ +H ++
Sbjct: 551 FSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSN 610
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
L+DMY+KCG + A +F +M + + +W++ I + G +A+ LF M++ + P
Sbjct: 611 TLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRP 670
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
+ T ++ AC + ++ G R H +G+ + + ++ A+ G ++EA
Sbjct: 671 DIYTVTSIVHACACSSSLDKG-RDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLV 729
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
+P ++ ++S +++ Q+ + NE L+++ + + + +A
Sbjct: 730 FSKIP-------VKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQFKPDDITMA 776
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 190/416 (45%), Gaps = 37/416 (8%)
Query: 42 KHLYQIHAQIQVSGLQNDAQILKELV----RFCTLSSSKNLTYARSILCNYVNDSVPIPW 97
K ++H + G ++ ++ L+ +F + S+ NL + +++ + W
Sbjct: 487 KECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLF-------DELSEPDVVSW 539
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N++I G + + +FI M G++ T VL A A I L+ G + K
Sbjct: 540 NSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVK 599
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
+ +V +N L+ Y C A +VF M + ++VSW I V +A+G
Sbjct: 600 ACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGL 659
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
F +M+ G PD T+ ++ AC +L G+ VH +I+ G N + ALI+MYAK
Sbjct: 660 FDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAK 719
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CG+V ARL+FS++ ++ +W+ MI G +Q+ EALELF +M+ P+ +T V
Sbjct: 720 CGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQK-QFKPDDITMACV 778
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH------TMADILARAGHLKEAYTFIM 391
L AC ++ G +HG R ++ + D+ A+ G L A +
Sbjct: 779 LPACAGLAALDKG-------REIHGHILRRGYFSDLHVACALVDMYAKCGLLVLA-QLLF 830
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEV-----RRRLLELEPRGSQNLVIV 442
+M + + I +++ +H G GNE R+ +EP S VI+
Sbjct: 831 DMIPKKDLISWTVMIAGYGMH------GFGNEAISTFNEMRIAGIEPDESSFSVIL 880
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 3/291 (1%)
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
+Y VL+ CAE L +G +V + + +G+ D LV Y +C K+FD +
Sbjct: 371 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKI 430
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
V WN++++ + E+V F KM+ LG + T VL LG + K
Sbjct: 431 MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECK 490
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
VH +++ G N + +LI Y K G V A LF + E +V +W++MI G +G
Sbjct: 491 RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNG 550
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
++ LE+F M + + T + VL A + G + G R H +
Sbjct: 551 FSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLG-RALHGFGVKACFSEEVVFS 609
Query: 371 HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVG 421
+T+ D+ ++ G+L A + M IV A+ + + Y D +G
Sbjct: 610 NTLLDMYSKCGNLNGATEVFVKM--GDTTIVSWTSTIAAYVREGLYSDAIG 658
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 165/467 (35%), Positives = 251/467 (53%), Gaps = 12/467 (2%)
Query: 39 CSKKH----LYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP 94
CS +H L +IH G D + V SS L A + C +V
Sbjct: 411 CSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSS--LDCAERVFCGMEGKTVS 468
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
WN LI +A + P +++ +F+ M G+ P FT +L ACA + L G ++
Sbjct: 469 -SWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGF 527
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ ++GL+ D + +L+ Y C +FD M +S+V WNV+IT +N EA
Sbjct: 528 MLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEA 587
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M G +P E + VL AC+++ L LGK VH ++ + + ALIDM
Sbjct: 588 LDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDM 647
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG + ++ +F R+ E + W+ +I G HG+ +A+ELF M+N P+ TF
Sbjct: 648 YAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTF 707
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
LGVL ACNHAG+V +G +Y +M++++G+KP HY + D+L RAG L EA + MP
Sbjct: 708 LGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMP 767
Query: 395 FQPNPIVLRALLSASSIHDAKYQD-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
+P+ + +LLS+ Y D +G EV ++LLELEP ++N V+++N YA +G W+
Sbjct: 768 DEPDSGIWSSLLSSCR----NYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWD 823
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQ 500
+V VR+ MK GL K G SW+E+GG ++RF S E I Q
Sbjct: 824 EVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQ 870
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 167/338 (49%), Gaps = 19/338 (5%)
Query: 34 FLKLCCSKKHLY---QIHAQIQVS-GLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
L+ C K+++ ++HA + S L+ND + ++ S+ + + +R + +
Sbjct: 98 LLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAM--YSACGSPSDSRGVF-DAA 154
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVLKACAEISGLNEG 148
+ +N L+ GY+ + R+A+ +F+++ + P FT P V KACA ++ + G
Sbjct: 155 KEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELG 214
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
V A K+G SD + N L+ YG C A KVF+ M R++VSWN ++ C EN
Sbjct: 215 EAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSEN 274
Query: 209 LWLGEAVGYFVKM---KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
GE G F ++ ++ G PD TM+ V+ AC +G + +G VH + G
Sbjct: 275 GGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEV 334
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM-KN 324
+ +L+DMY+KCG +G AR LF NV +W+ +I G ++ G EL M +
Sbjct: 335 TVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQRE 394
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
+ N VT L VL AC+ G ++ +HG
Sbjct: 395 EKVRVNEVTVLNVLPACS-------GEHQLLSLKEIHG 425
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 124/257 (48%), Gaps = 1/257 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRR-GIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ WN +I GY+ R + +M+R ++ E T VL AC+ L ++
Sbjct: 366 VSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHG 425
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+ G D N V Y C A +VF M ++V SWN +I +N + G+
Sbjct: 426 YAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGK 485
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
++ F+ M D G +PD T+ +L AC L L GK +H ++ G L+ +G +L+
Sbjct: 486 SLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMS 545
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
+Y +C ++ +L+F +ME ++ W+ MI G +Q+ EAL+ F M + I P +
Sbjct: 546 LYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIA 605
Query: 334 FLGVLCACNHAGMVEDG 350
GVL AC+ + G
Sbjct: 606 VTGVLGACSQVSALRLG 622
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 178/536 (33%), Positives = 264/536 (49%), Gaps = 61/536 (11%)
Query: 22 SDLLSKARQCLSFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNL 78
D + A S L C ++K L Q+H + S +D I LV
Sbjct: 145 DDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDM--------- 195
Query: 79 TYA---RSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFT 131
YA R + V D++P + WN+LI Y + EA+ +F++M G P E T
Sbjct: 196 -YAKCERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVT 254
Query: 132 YPFVLKACAEISGLNEGMQVQAN-VTKSGLDSDVYTNNNLVRFYGSCRRK---------- 180
V+ ACA ++ EG QV A+ V + L D+ NN LV Y C R
Sbjct: 255 LSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSM 314
Query: 181 ---------------------RDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
DA VF M E++V++WNV+I +N EA+ FV
Sbjct: 315 PSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFV 374
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ------LGTALID 273
++K P T VL+AC + L LG+ H+ +++ G + +G +L+D
Sbjct: 375 QLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVD 434
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MY K G++ +F RM + +W+AMI+G AQ+G A++AL LF M S+ +P+ VT
Sbjct: 435 MYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVT 494
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
+GVL AC H+G+V++G R+FH M HGI P R HY M D+L RAGHLKEA I +M
Sbjct: 495 MIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDM 554
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
P +P+ ++ +LL A +H +G RL EL+P S V+++N YAE+G W
Sbjct: 555 PTEPDSVLWASLLGACRLHKNVE---LGERTAGRLFELDPENSGPYVLLSNMYAEMGKWA 611
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
V VRR MK+ G+ K G SW+E+G ++ F + + I+ L + + M
Sbjct: 612 DVFRVRRSMKDRGVSKQPGCSWIEIGSKMNVFLARDNRHPCRNEIHSTLRIIQMEM 667
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 122/290 (42%), Gaps = 40/290 (13%)
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV---------- 204
V KS + + + N LV Y R R+A +VFD + R+ S+N +++
Sbjct: 43 VLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYARLGRPDEA 102
Query: 205 ------------CVENLWL-----------GEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
C N + G+A+ + M F + + LSAC
Sbjct: 103 RALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFASALSACA 162
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
+L G+ VH + + +GTAL+DMYAKC AR +F M E NV +W++
Sbjct: 163 AEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNVVSWNS 222
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
+I Q+G EAL LF M + P+ VT V+ AC +G + M
Sbjct: 223 LITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRD 282
Query: 362 GIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSI 411
++ + + + D+ A+ G EA +MP R+++S +SI
Sbjct: 283 RLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPS-------RSVVSETSI 325
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 139/411 (33%), Positives = 225/411 (54%), Gaps = 3/411 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I G A + E + + +M +KP FT VL AE ++ G ++
Sbjct: 205 VSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGC 264
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ GLD+D+Y ++L+ Y C R D+C+VF + ER +SWN II CV+N E
Sbjct: 265 SIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEG 324
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ +F +M +P + ++ AC L L LGK +H + G N + ++L+DM
Sbjct: 325 LRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDM 384
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG + A+ +F RM ++ +W+AMI+G A HG A +A+ELF M+ I PN+V F
Sbjct: 385 YAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAF 444
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ VL AC+H G+V++ ++YF+ M GI P HY ++D+L RAG L+EAY FI M
Sbjct: 445 MAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMH 504
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
P + LLSA +H + +V R+LE++P + +++AN Y+ W++
Sbjct: 505 IGPTGSIWATLLSACRVH---XNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKE 561
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+ R M+ +G++K SW+E+ ++ F +G +S I + +E L
Sbjct: 562 AAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVL 612
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 172/379 (45%), Gaps = 37/379 (9%)
Query: 40 SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNN 99
S+ Q+HAQ+ L+ A L L ++ S NL + L N ++ + W +
Sbjct: 21 SRSQAQQLHAQV----LKFQASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKS 76
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
+IR Y P +++ FI M G+ P +P VLK+CA + LN G + + + G
Sbjct: 77 VIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVG 136
Query: 160 LDSDVYTNNNLVRFYG-------SCRRKRDACKVFDDMCERS------------------ 194
LD D+YT N L+ Y S R++ A +VFD+M ER+
Sbjct: 137 LDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIF 196
Query: 195 -------VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLS 247
+VSWN II N E + +M +PD T+ VL E ++S
Sbjct: 197 EMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDIS 256
Query: 248 LGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA 307
GK +H I +G + + ++LIDMYAKC V + +F+ + E + +W+++I G
Sbjct: 257 RGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCV 316
Query: 308 QHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
Q+G +E L F M + I P +F ++ AC H + G + H +G
Sbjct: 317 QNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLG-KQLHGYITRNGFDENI 375
Query: 368 IHYHTMADILARAGHLKEA 386
++ D+ A+ G+++ A
Sbjct: 376 FIASSLVDMYAKCGNIRTA 394
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 163/463 (35%), Positives = 245/463 (52%), Gaps = 40/463 (8%)
Query: 78 LTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRG--IKPTEFTYPFV 135
+ YAR I + + + WN ++ GY R E+ +FI+M+++ + P T +
Sbjct: 187 VNYARKIF-DMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLM 245
Query: 136 LKACAEISGLNEGMQVQANVTKSGL-DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
L AC+++ L G + K G+ + ++ N L+ + SC A VFD+M R
Sbjct: 246 LSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRD 305
Query: 195 VVSWNVIIT----VCVENL---------------WLGEAVGY------------FVKMKD 223
V+SW I+T C +L W GY F M+
Sbjct: 306 VISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQM 365
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
+PDE TM+ +L+AC LG L LG+W + + + +G ALIDMY KCG V
Sbjct: 366 SNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEK 425
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A+ +F+ M++ + +TW+AMI+GLA +G+ EEAL +FS M +S++P+ +T++GV+CAC H
Sbjct: 426 AKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTH 485
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
G+V G +F M HGIKP HY M D+L RAGHLKEA IMNMP +PN IV
Sbjct: 486 VGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWG 545
Query: 404 ALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFM 462
+LL A +H + + + NE+ LELEP V++ N YA W+ + NVR+ M
Sbjct: 546 SLLGACRVHKNVQLAEMAANEI----LELEPENGAVYVLLCNIYAACKKWKNLHNVRKMM 601
Query: 463 KNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
G+KK+ G S +E+ G ++ F +G S + IY LE +
Sbjct: 602 MERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENM 644
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 177/369 (47%), Gaps = 44/369 (11%)
Query: 21 NSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTY 80
N+ L S + +S L+ C + + QIH+Q +GL ++ L +++ FC S ++ Y
Sbjct: 28 NTPLHSFVKSPISLLETCNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYY 87
Query: 81 ARSILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
AR + D +P P WN +I+GY+ + V ++ M IKP FT+PF+L
Sbjct: 88 ARKVF-----DEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLL 142
Query: 137 KACAEISGLNEGMQVQANVTKSG-LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSV 195
K + L G + + G LDS+++ + + C A K+FD V
Sbjct: 143 KGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEV 202
Query: 196 VSWNVIITVCVENLWLGEAVGYFVKM--KDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
V+WNV+++ E+ F++M K P+ T++++LSAC++L +L GK ++
Sbjct: 203 VTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIY 262
Query: 254 LQLIERGTV-LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINV--WT------------ 298
+ I+ G V N L ALIDM+A CG + AR +F M+ +V WT
Sbjct: 263 NKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRI 322
Query: 299 -----------------WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
W+AMI G + +E L LF +M+ S++ P+ T + +L AC
Sbjct: 323 DLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTAC 382
Query: 342 NHAGMVEDG 350
H G +E G
Sbjct: 383 AHLGALELG 391
>gi|357464871|ref|XP_003602717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491765|gb|AES72968.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 554
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 249/466 (53%), Gaps = 19/466 (4%)
Query: 44 LYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRG 103
+Y++HA + +G + L+ C+ + YA ++L P +N +I+
Sbjct: 4 VYKLHATLIKTGQHQNPHSLRPFFLTCS-NYPAAARYAATVLLRLPTPPDPFSYNTIIKH 62
Query: 104 YAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD 163
+ P A+ +F M R + FT+P +LK + + + K G D++
Sbjct: 63 VS----PTGAISLFSHMHRNSVPFDHFTFPLILKHHHH-------HLLHSLIFKLGFDTN 111
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM-- 221
++ N L+ YGS A K+FD+M R +VSW+ +I+ V+N EA+ F +M
Sbjct: 112 IFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALSVFQQMQM 171
Query: 222 --KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+D+ D ML V+SA + LG + LG WVH ++ G V+ LGTALI+MY++CG
Sbjct: 172 GHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVMTVPLGTALINMYSRCG 231
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
+ + +F M E NV TW+A+I GLA HG + EAL++F MK S + P+ F+GVL
Sbjct: 232 LIDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKPDGALFIGVLV 291
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
AC+H G+VEDG+R F M GIKPM HY M D+L RAG + EA+ F+ MP +PN
Sbjct: 292 ACSHGGLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAFDFVEEMPLKPNS 351
Query: 400 IVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVR 459
++ R LL A H+ G+ + R R++EL+P + V+++N Y VG W + +R
Sbjct: 352 VIWRTLLGACVNHN---HLGLAEKARERIIELDPYHDGDYVLLSNAYGRVGNWGGKAGLR 408
Query: 460 RFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
MK + K G+S+V + +H F SG + I + L ++
Sbjct: 409 NSMKQNRIVKEPGLSFVHIDQVVHEFVSGDHVHPQWEEITKFLASI 454
>gi|449486568|ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Cucumis sativus]
Length = 532
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 173/516 (33%), Positives = 264/516 (51%), Gaps = 40/516 (7%)
Query: 26 SKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
S +++CL L C + L Q HAQ+ SGL N +L L+ FC S + +L++A +
Sbjct: 3 SSSKRCLLLLHKCINMNQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFKLF 62
Query: 86 CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL 145
+ + ++ I +N +I+ A+ VF + R GI P +T P+VLKA A ++ +
Sbjct: 63 QHIQHPTICI-FNTMIKALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMTNI 121
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII--- 202
+ G + A K G + + N+L+ Y S R A +VFD+M E S VSW V+I
Sbjct: 122 HLGESIHACTIKLGSAVNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGY 181
Query: 203 ----------------TVCVENLWLGEAVGY------------FVKMKDLGFEPDETTML 234
TV +W GY F M+ EPDE ++
Sbjct: 182 ANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIV 241
Query: 235 VVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI 294
+LSAC +G L G W+H L G L ++ T LIDMYAKCG + A+ LF+ M +
Sbjct: 242 TILSACAHMGALDTGIWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQR 301
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYF 354
+ W+AMI G+A G E A++LF M+ + I P+ +TF+ V AC+++GMV++G R +
Sbjct: 302 DNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVWXACSNSGMVDEGIRIW 361
Query: 355 HEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP----IVLRALLSASS 410
+ M VH I+P HY + D+L+R G +EA I +P +P + RA LSA
Sbjct: 362 NRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSACC 421
Query: 411 IHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKM 470
H Q V E RL +LE R S V+++N YA +G E VR MK G++K+
Sbjct: 422 KHGQTQQAEVAAE---RLFQLE-RHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEKV 477
Query: 471 KGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
G S +++ G ++ F +G + + I+ +LE LN
Sbjct: 478 PGCSSIKVNGVVNEFIAGEKTHRHIDNIHLVLEELN 513
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 162/488 (33%), Positives = 265/488 (54%), Gaps = 14/488 (2%)
Query: 34 FLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
LK C L Q +H + S +ND ++K + F + +L AR +
Sbjct: 97 LLKRCTMLGKLKQGKLVHTHLMNSKFRNDL-VIKNSILF-MYAKCGSLEIARQVFDEMCV 154
Query: 91 DSVPIPWNNLIRGYA---WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
V + W ++I GY+ ++ A+ +F++M R G++P EF ++K C + +
Sbjct: 155 KDV-VTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVD 213
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G Q+ K G +V+ ++LV Y C R++ VFD++ ++ VSWN +I+
Sbjct: 214 GKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFAR 273
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
EA+G FVKM+ GF E T +L + + G+L GKW+H +++ G L +
Sbjct: 274 KGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYV 333
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN-SS 326
G L+ MYAK G + A+ +F R+ +++V + ++M++G AQHG +EA+ELF M
Sbjct: 334 GNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVE 393
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
I PN +TFL VL AC+HAG++++G YF M+ +G++P HY T+ D+ RAG L +A
Sbjct: 394 IEPNDITFLSVLTACSHAGLLDEGLYYFELMKK-YGLEPKLSHYTTVVDLFGRAGLLDQA 452
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKY 446
+FI MP +PN + ALL AS +H +G +++LEL+P +++N Y
Sbjct: 453 KSFIEEMPIEPNATIWGALLGASKMHK---NTEMGAYAAQKVLELDPFYPGAHTLLSNIY 509
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
A G W+ V+ VR+ MK+ GLKK SWVE+ S+H F + S + +Y++ E LN
Sbjct: 510 ASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYEMWENLN 569
Query: 507 LHMKVLNF 514
+K + +
Sbjct: 570 QKIKEIGY 577
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 174/362 (48%), Gaps = 21/362 (5%)
Query: 118 IDMKRRG-IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGS 176
+D+ G ++P Y +LK C + L +G V ++ S +D+ N+++ Y
Sbjct: 79 LDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAK 138
Query: 177 CRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG---YFVKMKDLGFEPDETTM 233
C A +VFD+MC + VV+W +IT ++ + A F++M G P+E +
Sbjct: 139 CGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFAL 198
Query: 234 LVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEE 293
++ C LG+ GK +H + G N +G++L+DMYA+CG + +RL+F +E
Sbjct: 199 SSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELES 258
Query: 294 INVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRY 353
N +W+A+I G A+ G EEAL LF M+ T+ +LC+ + G +E G ++
Sbjct: 259 KNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQG-KW 317
Query: 354 FHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHD 413
H G K + +T+ + A++G++ +A + +V ++S +S+
Sbjct: 318 LHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVF-------DRLVKVDVVSCNSMLI 370
Query: 414 AKYQDGVGNEVRRRL------LELEPRGSQNL-VIVANKYAEVGMWEKVSNVRRFMKNVG 466
Q G+G E +E+EP L V+ A +A G+ ++ MK G
Sbjct: 371 GYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHA--GLLDEGLYYFELMKKYG 428
Query: 467 LK 468
L+
Sbjct: 429 LE 430
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 162/485 (33%), Positives = 255/485 (52%), Gaps = 12/485 (2%)
Query: 24 LLSKARQCLSFLKLCCSKKHLY----QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLT 79
LL S L+ C S + Y QIHA +G+ D+ + L+ S +
Sbjct: 1032 LLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALID--VYSKRGKME 1089
Query: 80 YARSILCNYVNDSVPIP-WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKA 138
A + N D + WN ++ GY S +A+ ++I M+ G + + T KA
Sbjct: 1090 EAEFLFVN--QDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKA 1147
Query: 139 CAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSW 198
+ GL +G Q+ A V K G + D++ + ++ Y C A +VF ++ V+W
Sbjct: 1148 AGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAW 1207
Query: 199 NVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
+I+ CVEN A+ + +M+ +PDE T ++ AC+ L L G+ +H +++
Sbjct: 1208 TTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVK 1267
Query: 259 RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALEL 318
+ + T+L+DMYAKCG + AR LF R + +W+AMI+GLAQHG A+EAL+
Sbjct: 1268 LNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQF 1327
Query: 319 FSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILA 378
F MK+ + P+ VTF+GVL AC+H+G+V + Y F+ M+ +GI+P HY + D L+
Sbjct: 1328 FKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALS 1387
Query: 379 RAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQN 438
RAG ++EA I +MPF+ + + R LL+A + + G V +LL LEP S
Sbjct: 1388 RAGRIEEAEKVISSMPFEASASMYRTLLNACRV---QVDRETGKRVAEKLLALEPSDSAA 1444
Query: 439 LVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGI 498
V+++N YA WE V++ R M+ V +KK G SWV+L +H F +G S E I
Sbjct: 1445 YVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVI 1504
Query: 499 YQILE 503
Y +E
Sbjct: 1505 YNKVE 1509
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 174/407 (42%), Gaps = 36/407 (8%)
Query: 6 VPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHL-YQIHAQIQVSGLQNDAQILK 64
+ + +F P + N DL++ LS L K H + + ++ S + L
Sbjct: 707 LSSARKLFDTTP-DTNRDLVT-WNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLA 764
Query: 65 ELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRG-----YAWSDRPREAVWVFID 119
+ + C LS+S + A L Y + + W+ + G YA REA +F
Sbjct: 765 PVFKMCLLSASPS---ASESLHGYAV-KIGLQWDVFVAGALVNIYAKFGLIREARVLFDG 820
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M R + + ++KA + E M + + ++G D T L R C++
Sbjct: 821 MAVRDV----VLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVV-KCKK 875
Query: 180 --------KRDACKVF---DDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEP 228
K A K+F DD + V+ WN ++ ++ EAV FV M +
Sbjct: 876 NILELKQFKAYATKLFMYDDDGSD--VIVWNKALSRFLQRGEAWEAVDCFVDMINSRVAC 933
Query: 229 DETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLF 288
D T +V+L+ L L LGK +H ++ G +G LI+MY K G+V AR +F
Sbjct: 934 DGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVF 993
Query: 289 SRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVE 348
+M E+++ +W+ MI G G E ++ +F ++ S+ P+ T VL AC+ +E
Sbjct: 994 GQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSS---LE 1050
Query: 349 DGY---RYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
GY H G+ + D+ ++ G ++EA +N
Sbjct: 1051 GGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVN 1097
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 144/372 (38%), Gaps = 57/372 (15%)
Query: 2 VRFPVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLY---QIHAQIQVSGLQN 58
+R T N + P + L+ QC S L+ + L + HA+I SG
Sbjct: 636 LRAATSTANPLTP------RAHLIHSLPQCFSILRQAIAASDLSLGKRAHARILTSGHHP 689
Query: 59 DAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP------IPWNNLIRGYAW-SDRPR 111
D + L+ S L+ AR + D+ P + WN ++ A +D+
Sbjct: 690 DRFVTNNLITMYAKCGS--LSSARKLF-----DTTPDTNRDLVTWNAILSALAAHADKSH 742
Query: 112 EAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLV 171
+ +F ++R + T T V K C + + + K GL DV+ LV
Sbjct: 743 DGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALV 802
Query: 172 RFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDET 231
Y R+A +FD M R VV WNV++ V+ EA+ F + GF PD+
Sbjct: 803 NIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDV 862
Query: 232 TMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM 291
T L+ + R V+ C+ + + +L
Sbjct: 863 T---------------------LRTLSR--VVKCKKNILELKQFKAYA----TKLFMYDD 895
Query: 292 EEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGY 351
+ +V W+ + Q G A EA++ F +M NS ++ + +TF+ +L +E G
Sbjct: 896 DGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELG- 954
Query: 352 RYFHEMEHVHGI 363
+ +HGI
Sbjct: 955 ------KQIHGI 960
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 144/430 (33%), Positives = 227/430 (52%), Gaps = 4/430 (0%)
Query: 76 KNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFV 135
+NL YAR + S+ I W +I Y + E V +F+ M G+ P E T +
Sbjct: 276 ENLAYARRVFDGLSKASI-ISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSL 334
Query: 136 LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSV 195
+K C L G + A ++G + + YG C R A VFD + +
Sbjct: 335 VKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDL 394
Query: 196 VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQ 255
+ W+ +I+ +N + EA FV M G P+E TM+ +L C + G+L +GKW+H
Sbjct: 395 MMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSY 454
Query: 256 LIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEA 315
+ ++G + L T+ +DMYA CG + A LF+ + ++ W+AMI G A HG+ E A
Sbjct: 455 IDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAA 514
Query: 316 LELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMAD 375
LELF M+ ++PN +TF+G L AC+H+G++++G R FH+M H G P HY M D
Sbjct: 515 LELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVD 574
Query: 376 ILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
+L RAG L EA+ I +MP +PN V + L+A +H +G ++ L LEP
Sbjct: 575 LLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHK---NIKLGEWAAKQFLSLEPHK 631
Query: 436 SQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVEL 495
S V+++N YA W V+ +RR MK+ G+ K G+S +E+ G +H F G +
Sbjct: 632 SGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDA 691
Query: 496 AGIYQILETL 505
+Y++++ +
Sbjct: 692 KKVYEMIDEM 701
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 168/360 (46%), Gaps = 9/360 (2%)
Query: 33 SFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S LK CC ++H + +G D + L+ S +L AR +L + +
Sbjct: 129 SVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMM--YSEVGSLALAR-LLFDKI 185
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+ + W+ +IR Y S EA+ + DM +KP+E + AE++ L G
Sbjct: 186 ENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGK 245
Query: 150 QVQANVTKSGL--DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
+ A V ++G S V L+ Y C A +VFD + + S++SW +I +
Sbjct: 246 AMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIH 305
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
L E V FVKM G P+E TML ++ C G L LGK +H + G L+ L
Sbjct: 306 CNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVL 365
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
TA IDMY KCG V AR +F + ++ WSAMI AQ+ +EA ++F +M I
Sbjct: 366 ATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGI 425
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
PN T + +L C AG +E G ++ H GIK I + D+ A G + A+
Sbjct: 426 RPNERTMVSLLMICAKAGSLEMG-KWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAH 484
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 129/289 (44%), Gaps = 3/289 (1%)
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
LI Y ++ P +A ++ M+ + F P VLKAC I G +V V K+G
Sbjct: 95 LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
DV+ N L+ Y A +FD + + VVSW+ +I + L EA+
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLR 214
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV--LNCQLGTALIDMYAK 277
M + +P E M+ + EL +L LGK +H ++ G L TALIDMY K
Sbjct: 215 DMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVK 274
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
C + AR +F + + ++ +W+AMI E + LF M + PN +T L +
Sbjct: 275 CENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSL 334
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+ C AG +E G + H +G + D+ + G ++ A
Sbjct: 335 VKECGTAGALELG-KLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSA 382
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 166/470 (35%), Positives = 244/470 (51%), Gaps = 8/470 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+IH + G D + LV C + L A + + + D + W +I GY
Sbjct: 133 KIHTLVVKGGFDCDVFVKTSLV--CLYAKCGYLEDAHKVF-DDIPDKNVVSWTAIISGYI 189
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ REA+ +F + + P FT VL AC ++ LN G + + + G+ +V+
Sbjct: 190 GVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVF 249
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
+LV Y C A VFD M E+ +VSW +I N EA+ F++M+
Sbjct: 250 VGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQREN 309
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQLGTALIDMYAKCGAVGCA 284
+PD T++ VLSAC LG L LG+WV L++R L N LGTALID+YAKCG++ A
Sbjct: 310 VKPDCYTVVGVLSACARLGALELGEWVS-GLVDRNEFLYNPVLGTALIDLYAKCGSMSRA 368
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA 344
+F M+E + W+A+I GLA +GY + + LF ++ I P+ TF+G+LC C HA
Sbjct: 369 WEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHA 428
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRA 404
G+V++G RYF+ M + P HY M D+L RAG L EA+ I NMP + N IV A
Sbjct: 429 GLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGA 488
Query: 405 LLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKN 464
LL A IH + ++L+ELEP S N V+++N Y+ W++ + VR M
Sbjct: 489 LLGACRIH---RDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNE 545
Query: 465 VGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
++K G SW+E+ G +H F G IY L+ L MKV +
Sbjct: 546 KRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGY 595
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 131/389 (33%), Positives = 211/389 (54%), Gaps = 20/389 (5%)
Query: 55 GLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAV 114
GL +D +L ++R C+ S + Y R L + + WN +IRG +D +A+
Sbjct: 41 GLCHDNYLLNMILR-CSFDFS-DTNYTR-FLFHQIKQPNIFLWNTMIRGLVSNDCFDDAI 97
Query: 115 WVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFY 174
+ M+ G P FT+PFVLKACA + L G+++ V K G D DV+ +LV Y
Sbjct: 98 EFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLY 157
Query: 175 GSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTML 234
C DA KVFDD+ +++VVSW II+ + EA+ F ++ ++ PD T++
Sbjct: 158 AKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIV 217
Query: 235 VVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI 294
VLSACT+LG+L+ G+W+H ++E G V N +GT+L+DMYAKCG + AR +F M E
Sbjct: 218 RVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEK 277
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYF 354
++ +W AMI G A +G +EA++LF M+ ++ P+ T +GVL AC G +E G
Sbjct: 278 DIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELG---- 333
Query: 355 HEMEHVHGIKPMRIHYH------TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
E V G+ + + D+ A+ G + A+ M + + +V A++S
Sbjct: 334 ---EWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMK-EKDRVVWNAIISG 389
Query: 409 SSIHD-AKYQDGVGNEVRRRLLELEPRGS 436
+++ K G+ +V + L ++P G+
Sbjct: 390 LAMNGYVKISFGLFGQVEK--LGIKPDGN 416
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 152/449 (33%), Positives = 245/449 (54%), Gaps = 12/449 (2%)
Query: 68 RFCTL-----SSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKR 122
RFC S +L A+++ ++D + + ++I GYA EAV +F +M+
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVF-REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 123 RGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRD 182
GI P +T VL CA L+EG +V + ++ L D++ +N L+ Y C ++
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 450
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF-VKMKDLGFEPDETTMLVVLSACT 241
A VF +M + ++SWN II +N + EA+ F + +++ F PDE T+ VL AC
Sbjct: 451 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 510
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
L G+ +H ++ G + + +L+DMYAKCGA+ A +LF + ++ +W+
Sbjct: 511 SLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTV 570
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
MI G HG+ +EA+ LF+ M+ + I + ++F+ +L AC+H+G+V++G+R+F+ M H
Sbjct: 571 MIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHEC 630
Query: 362 GIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSI-HDAKYQDGV 420
I+P HY + D+LAR G L +AY FI NMP P+ + ALL I HD K + V
Sbjct: 631 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKV 690
Query: 421 GNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGG 480
+V ELEP + V++AN YAE WE+V +R+ + GL+K G SW+E+ G
Sbjct: 691 AEKV----FELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKG 746
Query: 481 SIHRFYSGYDSQVELAGIYQILETLNLHM 509
++ F +G S E I L + M
Sbjct: 747 RVNIFVAGDSSNPETENIEAFLRKVRARM 775
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 177/361 (49%), Gaps = 7/361 (1%)
Query: 29 RQCLSFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
R S L+LC K L ++ I+ +G D+ + +L T + +L A +
Sbjct: 95 RTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYT--NCGDLKEASRVF 152
Query: 86 CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL 145
+ V + WN L+ A S ++ +F M G++ +T+ V K+ + + +
Sbjct: 153 -DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
+ G Q+ + KSG N+LV FY +R A KVFD+M ER V+SWN II
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
V N + + FV+M G E D T++ V + C + +SLG+ VH ++
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 331
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
+ L+DMY+KCG + A+ +F M + +V ++++MI G A+ G A EA++LF M+
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
ISP+ T VL C ++++G R HE + + + + D+ A+ G ++E
Sbjct: 392 GISPDVYTVTAVLNCCARYRLLDEGKR-VHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 450
Query: 386 A 386
A
Sbjct: 451 A 451
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 157/339 (46%), Gaps = 5/339 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+H I SG + LV F ++ + AR + V I WN++I GY
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAF--YLKNQRVDSARKVFDEMTERDV-ISWNSIINGYV 272
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ + + VF+ M GI+ T V CA+ ++ G V + K+ +
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N L+ Y C A VF +M +RSVVS+ +I GEAV F +M++ G
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
PD T+ VL+ C L GK VH + E + + AL+DMYAKCG++ A
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS-NMKNSSISPNYVTFLGVLCACNHA 344
L+FS M ++ +W+ +I G +++ YA EAL LF+ ++ SP+ T VL AC
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+ G R H +G R +++ D+ A+ G L
Sbjct: 513 SAFDKG-REIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 148/338 (43%), Gaps = 10/338 (2%)
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N +R + S AV + + I P T VL+ CA+ L +G +V +
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
+G D + L Y +C ++A +VFD++ + WN+++ ++ ++G
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
F KM G E D T V + + L ++ G+ +H +++ G +G +L+ Y K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
V AR +F M E +V +W+++I G +G AE+ L +F M S I + T + V
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
C + ++ G R H + +T+ D+ ++ G L A M
Sbjct: 303 FAGCADSRLISLG-RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD-- 359
Query: 398 NPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
R+++S +S+ ++G+ E + E+E G
Sbjct: 360 -----RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 167/471 (35%), Positives = 242/471 (51%), Gaps = 46/471 (9%)
Query: 77 NLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
+L AR I D +P I W+ +I Y+ S EA+ +F M + G KP +
Sbjct: 265 DLREARRIF-----DEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCF 319
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
L A A + L+ G+ + +VTK G+D DV+ ++L+ Y C + D VFD + E
Sbjct: 320 ACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILE 379
Query: 193 RSVVSWN-------------------------------VIITVCVENLWLGEAVGYFVKM 221
++VV WN II +EN + + F +
Sbjct: 380 KNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTL 439
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
G P+++T VL AC + +L G VH ++I+ G + +GTAL DMYAKCG +
Sbjct: 440 LVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDI 499
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCA 340
G ++ +F RM E N +W+ MI GLA+ G+A E+L LF M + S ++PN + L VL A
Sbjct: 500 GSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFA 559
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPI 400
C+H G+V+ G YF+ ME V+GIKP HY + D+L+R+G L EA FI +PFQP
Sbjct: 560 CSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEAN 619
Query: 401 VLRALLSASSIHDAKYQD-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVR 459
ALLS KY+D + ++L +L S V+++N YA G W VSN+R
Sbjct: 620 AWAALLSGCK----KYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIR 675
Query: 460 RFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+ M+ GLKK G SWVE+ +H FYS S + IY L+ L MK
Sbjct: 676 KLMREKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLLRSEMK 726
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 159/368 (43%), Gaps = 75/368 (20%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W I G+ + EA+ +F + G++P + T+ V++AC E+ GM +
Sbjct: 150 VSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGL 209
Query: 155 VTKSGLDSDVYTNNNLV-------------RFYGSCRRK------------------RDA 183
V K+G + + +N+L+ R + ++ R+A
Sbjct: 210 VVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREA 269
Query: 184 CKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
++FD+M ER+ +SW+ +I ++ + EA+ F KM GF+P+ + LSA L
Sbjct: 270 RRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASL 329
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
LS G +H + + G + +G++LID+Y KCG RL+F + E NV W++M+
Sbjct: 330 RALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMV 389
Query: 304 LGLAQHGYA-------------------------------EEALELFSNMKNSSISPNYV 332
G + +G E+ LE+F+ + S +PN
Sbjct: 390 GGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKS 449
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHG-IKPMRIHYH-----TMADILARAGHLKEA 386
TF VLCAC ++ G +VHG I + I Y + D+ A+ G + +
Sbjct: 450 TFSSVLCACASIASLDKGM-------NVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSS 502
Query: 387 YTFIMNMP 394
MP
Sbjct: 503 KQVFERMP 510
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 31/179 (17%)
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
++VVSW I+ V N EA+ F ++ + G P++ T V+ AC ELG+ LG +
Sbjct: 147 QNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSI 206
Query: 253 HLQLIERG-----------TVLNCQLG--------------------TALIDMYAKCGAV 281
+++ G L+ ++G TA++D Y + G +
Sbjct: 207 LGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDL 266
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
AR +F M E N +WSAMI +Q GYAEEAL+LFS M PN F L A
Sbjct: 267 REARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSA 325
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 130/335 (38%), Gaps = 66/335 (19%)
Query: 146 NEGMQVQANV-----TKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
N+G+ Q NV K+G S Y L+ Y +CR+
Sbjct: 33 NQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRK--------------------- 71
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLV---VLSACTELGNLSLGKWVHLQLI 257
F ++ + E D + ++V ++SA + GNL + + ++
Sbjct: 72 -----------------FAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMP 114
Query: 258 ERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALE 317
ER V +ALI K G V + F R NV +W+A I G ++G EAL+
Sbjct: 115 ERNEVS----WSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALK 170
Query: 318 LFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL 377
LF + S + PN VTF V+ AC G G + +K HY ++++ L
Sbjct: 171 LFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLV-----VKAGFEHYLSVSNSL 225
Query: 378 A----RAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP 433
R G + A M R ++S ++I DA + G E RR E+
Sbjct: 226 ITLSLRMGEIDLARRVFDRME-------KRDVVSWTAILDAYVETGDLREARRIFDEMPE 278
Query: 434 RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLK 468
R + + +Y++ G E+ + M G K
Sbjct: 279 RNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFK 313
>gi|15241180|ref|NP_200442.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171630|sp|Q9FMA1.1|PP433_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g56310
gi|10177829|dbj|BAB11258.1| unnamed protein product [Arabidopsis thaliana]
gi|332009364|gb|AED96747.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 530
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 170/507 (33%), Positives = 265/507 (52%), Gaps = 46/507 (9%)
Query: 42 KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW--NN 99
K L Q H + ++GL D + + + C S++ +L YA S+ + + P + N
Sbjct: 29 KTLKQSHCYMIITGLNRDNLNVAKFIEAC--SNAGHLRYAYSV---FTHQPCPNTYLHNT 83
Query: 100 LIRGYAWSDRPRE---AVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
+IR + D P A+ V+ + KP FT+PFVLK +S + G Q+ V
Sbjct: 84 MIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVV 143
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSV--------------------- 195
G DS V+ L++ Y SC DA K+FD+M + V
Sbjct: 144 VFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARS 203
Query: 196 ------------VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
VSW +I+ ++ EA+ F +M EPDE T+L VLSAC +L
Sbjct: 204 LLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADL 263
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
G+L LG+ + + RG L A+IDMYAK G + A +F + E NV TW+ +I
Sbjct: 264 GSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTII 323
Query: 304 LGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
GLA HG+ EAL +F+ M + + PN VTF+ +L AC+H G V+ G R F+ M +GI
Sbjct: 324 AGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGI 383
Query: 364 KPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNE 423
P HY M D+L RAG L+EA I +MPF+ N + +LL+AS++H + +G
Sbjct: 384 HPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVH---HDLELGER 440
Query: 424 VRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIH 483
L++LEP S N +++AN Y+ +G W++ +R MK +G+KKM G S +E+ ++
Sbjct: 441 ALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVY 500
Query: 484 RFYSGYDSQVELAGIYQILETLNLHMK 510
+F SG + ++ I++IL+ ++L ++
Sbjct: 501 KFISGDLTHPQVERIHEILQEMDLQIQ 527
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 151/428 (35%), Positives = 238/428 (55%), Gaps = 8/428 (1%)
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P + W ++I GYA +DR +A+ +F M G +P EFT ++K C ++ N
Sbjct: 133 DEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYN 192
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G Q+ A K G S+V+ ++LV Y C +A VFD + ++ VSWN +I
Sbjct: 193 CGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYA 252
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
EA+ FV+M+ G+ P E T +LS+C+ +G L GKW+H L++ L
Sbjct: 253 RKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGY 312
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+G L+ MYAK G++ A +F ++ +++V + ++M++G AQHG +EA + F M
Sbjct: 313 VGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFG 372
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
I PN +TFL VL AC+HA ++++G YF M + I+P HY T+ D+L RAG L +A
Sbjct: 373 IEPNDITFLSVLTACSHARLLDEGKHYFGLMRK-YNIEPKVSHYATIVDLLGRAGLLDQA 431
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKY 446
+FI MP +P + ALL AS +H +G +R+ EL+P ++AN Y
Sbjct: 432 KSFIEEMPIEPTVAIWGALLGASKMHK---NTEMGAYAAQRVFELDPSYPGTHTLLANIY 488
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
A G WE V+ VR+ MK+ G+KK SWVE+ S+H F + + + I+++ E LN
Sbjct: 489 ASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKLN 548
Query: 507 LHMKVLNF 514
+K + +
Sbjct: 549 QKIKEIGY 556
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 155/307 (50%), Gaps = 8/307 (2%)
Query: 125 IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDAC 184
++P Y +LK C ++ L EG V +V S D+ N+L+ Y C A
Sbjct: 70 LEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGAR 129
Query: 185 KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELG 244
++FD+M R +VSW +IT +N +A+ F +M G EP+E T+ ++ C +
Sbjct: 130 RLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMA 189
Query: 245 NLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMIL 304
+ + G+ +H + G N +G++L+DMYA+CG +G A L+F ++ N +W+A+I
Sbjct: 190 SYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIA 249
Query: 305 GLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIK 364
G A+ G EEAL LF M+ P T+ +L +C+ G +E G ++ H K
Sbjct: 250 GYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQG-KWLHAHLMKSSQK 308
Query: 365 PMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEV 424
+ +T+ + A++G +++A + +V ++S +S+ Q G+G E
Sbjct: 309 LVGYVGNTLLHMYAKSGSIRDAEKVF-------DKLVKVDVVSCNSMLIGYAQHGLGKEA 361
Query: 425 RRRLLEL 431
++ E+
Sbjct: 362 AQQFDEM 368
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 169/486 (34%), Positives = 260/486 (53%), Gaps = 28/486 (5%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP--- 94
CC Q+HA I DA I L+R + + AR + D +P
Sbjct: 156 CCDLGFGQQVHADIVKVCSDLDAFIGTNLLRM--YAEVGEIGDARKVF-----DGMPSRG 208
Query: 95 -IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ WN +I Y+ R +++ +F + R GI E+TY VL A + E MQV +
Sbjct: 209 LVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHS 268
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+ + G SD +TNN LV Y C A ++F+++ ++ VVSW VII +++ + E
Sbjct: 269 LIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEE 328
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNCQLGTALI 272
A+ F +M+ EP+ T +L AC + G+ H +++ G + + +G+A++
Sbjct: 329 AMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVV 388
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM---KNSSISP 329
DMY+KCG +G A F M E ++ +W+ +I G AQ+G +AL+L++ M S I+P
Sbjct: 389 DMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAP 448
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
N VTF+GVLCAC+H G++++GY YF EM H IKP HY M D+L RAG L+EA
Sbjct: 449 NEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEAL 508
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLEL---EPRGSQNLVIVANKY 446
I+ +P +P+ ++ ALL A +H G RR L EPR S N V++AN Y
Sbjct: 509 ILALPIKPDNVMWGALLGACKLH------GDVQMTRRTAEHLYTNEPRNSSNYVLLANSY 562
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG--YDSQVELAGIYQILET 504
++G W + +R M+ G++K G SWVE+G +H F +G Q+E+A Q+L
Sbjct: 563 TDIGEWGEAVEIREVMEARGVEKTAGCSWVEIGTCMHSFLAGDXLHPQIEVAS--QVLPR 620
Query: 505 LNLHMK 510
L L M+
Sbjct: 621 LYLQMR 626
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 149/300 (49%), Gaps = 8/300 (2%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN ++ G + + E + F+ M+ ++P FTY ++ C L G QV A++
Sbjct: 115 WNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAIIIPCC----DLGFGQQVHADIV 170
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE-AV 215
K D D + NL+R Y DA KVFD M R +V+WN +I+ C G+ ++
Sbjct: 171 KVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNAMIS-CYSKYGRGDKSI 229
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY 275
G F ++ G DE T +VL+ + VH +IERG + AL+++Y
Sbjct: 230 GLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLY 289
Query: 276 AKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFL 335
+KCG V A LF + + +V +W+ +I+G Q G+ EEA+ LF M+ I PN TF
Sbjct: 290 SKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFG 349
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT-MADILARAGHLKEAYTFIMNMP 394
G+L AC A + G R+FH + G+ + + + D+ ++ G + +A MP
Sbjct: 350 GLLGACADANAFQKG-RHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMP 408
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 96/175 (54%), Gaps = 4/175 (2%)
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
V + N ++ Y +A K+FD +R SWN++++ CV+N LGE + +F+KM+
Sbjct: 81 VVSYNTILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRC 140
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
PD T +++ C +L G+ VH +++ + L+ +GT L+ MYA+ G +G
Sbjct: 141 SSVRPDNFTYAIIIPCC----DLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGD 196
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
AR +F M + TW+AMI +++G ++++ LF + IS + T+ VL
Sbjct: 197 ARKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVL 251
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 224/416 (53%), Gaps = 3/416 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I + ++ E + +F+ M R ++P ++T+ V+KACA LN GM+V
Sbjct: 439 VSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGR 498
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V KSG+ D + + ++ Y C +A K+ + + ER+ VSWN II+ A
Sbjct: 499 VIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENA 558
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ YF +M +G PD T VL C L + LGK +H Q+++ + + + ++DM
Sbjct: 559 LSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDM 618
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG + +R++F + + + TWSAMI A HG E+A++LF M+ ++ PN+ F
Sbjct: 619 YSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIF 678
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ VL AC H G V+ G YF EM +G+ P HY M D+L R+G + EA I +MP
Sbjct: 679 ISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMP 738
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
F+ + ++ R LL + V + LL+L+P+ S V+++N YA GMW +
Sbjct: 739 FEADDVIWRTLLGICRLQG---NVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGE 795
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
V+ +R FMKN LKK G SW+++ +H F G + IYQ L MK
Sbjct: 796 VAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEMK 851
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 169/341 (49%), Gaps = 20/341 (5%)
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N LI GYA D+ EA+ +F +++ + E + L AC+ I G EG+Q+ K
Sbjct: 341 NALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVK 400
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
GLD ++ N ++ Y C +AC +FDDM + VSWN II +N + E +
Sbjct: 401 CGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLAL 460
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
FV M EPD+ T V+ AC L+ G VH ++I+ G L+ +G+A+IDMY K
Sbjct: 461 FVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCK 520
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CG + A + R+EE +W+++I G + E AL FS M + P+ T+ V
Sbjct: 521 CGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATV 580
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHG-IKPMRIHYH-----TMADILARAGHLKEAYTFIM 391
L C + VE G + +HG I +++H T+ D+ ++ G+++++
Sbjct: 581 LDICANLATVELG-------KQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFE 633
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELE 432
P + + + A++ A + H G+G + + E++
Sbjct: 634 KAP-KRDYVTWSAMICAYAYH------GLGEDAIKLFEEMQ 667
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 175/393 (44%), Gaps = 34/393 (8%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL-------------------- 85
Q HAQI V+G + L++F NL YA ++
Sbjct: 59 QAHAQITVTGFVPTVFVSNCLLQF--YCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAG 116
Query: 86 ------CNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFV 135
++ DS+P + WN+++ Y + R+++ +F M+ I+ T+ V
Sbjct: 117 VGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVV 176
Query: 136 LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSV 195
LKAC I G+QV + G DSDV T LV Y +C++ A +F +M ER+
Sbjct: 177 LKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNS 236
Query: 196 VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQ 255
V W+ +I V N E + + M D G + T +C L LG +H
Sbjct: 237 VCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAY 296
Query: 256 LIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEA 315
++ + +GTA +DMYAKC + AR +F+ + +A+I+G A+ EA
Sbjct: 297 ALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEA 356
Query: 316 LELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMAD 375
LE+F +++ S + + ++ G L AC+ +G + H + G+ +T+ D
Sbjct: 357 LEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQ-LHGLAVKCGLDFNICVANTILD 415
Query: 376 ILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
+ A+ G L EA +M + + + A+++A
Sbjct: 416 MYAKCGALMEACLIFDDMEIK-DAVSWNAIIAA 447
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 139/296 (46%), Gaps = 3/296 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+H G +D LV S+ K L +A +I C + + + W+ +I GY
Sbjct: 191 QVHCLAIQMGFDSDVVTGTALVDM--YSTCKKLDHAFNIFCE-MPERNSVCWSAVIAGYV 247
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+DR E + ++ M G+ ++ T+ ++CA +S G Q+ A K+ D
Sbjct: 248 RNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNI 307
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
+ Y C R DA KVF+ + S N +I + EA+ F ++
Sbjct: 308 VGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSY 367
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+ DE ++ L+AC+ + G +H ++ G N + ++DMYAKCGA+ A
Sbjct: 368 LDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEAC 427
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
L+F ME + +W+A+I Q+ + EE L LF +M S++ P+ TF V+ AC
Sbjct: 428 LIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKAC 483
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 116/258 (44%), Gaps = 32/258 (12%)
Query: 125 IKPTE-FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDA 183
+ PT+ T+ + + C+ + +N G Q A +T +G V+ +N L++FY C A
Sbjct: 33 MNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYA 92
Query: 184 CKVFDDMCERSVVSWNVII-------------------------------TVCVENLWLG 212
VFD M +R V+SWN +I + ++N +
Sbjct: 93 FNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHR 152
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
+++ F KM+ L + D T VVL ACT + + LG VH I+ G + GTAL+
Sbjct: 153 KSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALV 212
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
DMY+ C + A +F M E N WSA+I G ++ E L+L+ M + + +
Sbjct: 213 DMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQA 272
Query: 333 TFLGVLCACNHAGMVEDG 350
TF +C E G
Sbjct: 273 TFASAFRSCAGLSAFELG 290
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 137/322 (42%), Gaps = 45/322 (13%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILC 86
S +K C KK L ++H ++ SG+ D + ++ C + + R
Sbjct: 478 SVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHER---- 533
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
+ + + WN++I G++ + A+ F M + G+ P FTY VL CA ++ +
Sbjct: 534 --LEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVE 591
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G Q+ + K L SDVY + +V Y C +D+ +F+ +R V+W+ +I
Sbjct: 592 LGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYA 651
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+ +A+ F +M+ +P+ T + VL AC +G + G +H
Sbjct: 652 YHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKG--LHY------------ 697
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+M + G L +ME +S M+ L + G EALEL +M +
Sbjct: 698 ----FREMRSHYG-------LDPQMEH-----YSCMVDLLGRSGQVNEALELIESMPFEA 741
Query: 327 ISPNYVTFLGVLCACNHAGMVE 348
+ T LG+ C G VE
Sbjct: 742 DDVIWRTLLGI---CRLQGNVE 760
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 156/426 (36%), Positives = 238/426 (55%), Gaps = 19/426 (4%)
Query: 95 IPWNNLIRGYAWSD-RPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ W ++ A +D R +EA+ + M+R G+ P +T+ VL AC L V A
Sbjct: 136 VTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACTTPGMLT---AVHA 192
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+ K+GLDSDV+ ++L+ Y +VFD+M R +V WN II ++ G+
Sbjct: 193 STVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQS---GD 249
Query: 214 AVG---YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLI--ERGTVLNCQLG 268
VG F++MKD GF ++ T+ VL ACT + L G+ VH ++ +R +L+
Sbjct: 250 GVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLKYDRDLILH---- 305
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
AL+DMY KCG++ A LF RM + +V +WS M+ GLAQ+G + EAL +F MK+ ++
Sbjct: 306 NALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDLMKSQGVA 365
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
PN+VT +GVL AC+HAG+VEDG+ YF M+ + GI+P R H++ M D+L RAG L EA
Sbjct: 366 PNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLGRAGKLDEAVE 425
Query: 389 FIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAE 448
FI M +P+ ++ R LL A +H + R +L+LEP V+++N YA+
Sbjct: 426 FIHGMSLEPDSVIWRTLLGACRMHK---NASLAAYAAREILKLEPDDQGARVLLSNTYAD 482
Query: 449 VGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLH 508
+ W + M++ G++K G SW+EL +H F +G S I Q L L
Sbjct: 483 LRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVHVFIAGDLSHPCSDTIIQELNRLIGR 542
Query: 509 MKVLNF 514
+K L +
Sbjct: 543 IKSLGY 548
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 125/268 (46%), Gaps = 16/268 (5%)
Query: 135 VLKACAEISGLNEGMQVQANVTKSG-LDSD----VYTNNNLVRFYGSCRRKRDACKVFDD 189
++K C + G + +V G L D ++ +N+L Y DA ++FD
Sbjct: 70 LVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLLDDALRMFDG 129
Query: 190 MCERSVVSWNVIITVCVE-NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSL 248
M R+VV+W ++ + EA+ + V M+ G P+ T VL ACT G L+
Sbjct: 130 MPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACTTPGMLTA 189
Query: 249 GKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ 308
VH ++ G + + ++LID Y K G + R +F M ++ W+++I G AQ
Sbjct: 190 ---VHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQ 246
Query: 309 HGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR- 367
G A+ELF MK++ S N T VL AC M+E G + H H +K R
Sbjct: 247 SGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQV-----HAHVLKYDRD 301
Query: 368 -IHYHTMADILARAGHLKEAYTFIMNMP 394
I ++ + D+ + G L++A MP
Sbjct: 302 LILHNALLDMYCKCGSLEDADALFHRMP 329
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 118/250 (47%), Gaps = 10/250 (4%)
Query: 33 SFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILCNYVND 91
S L C + L +HA +GL +D + L+ + L +L R + V
Sbjct: 176 SVLGACTTPGMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLG---DLDGGRRVFDEMVTR 232
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
+ + WN++I G+A S A+ +F+ MK G + T VL+AC + L G QV
Sbjct: 233 DL-VVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQV 291
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
A+V K D D+ +N L+ Y C DA +F M +R V+SW+ +++ +N
Sbjct: 292 HAHVLK--YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKS 349
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER--GTVLNCQLGT 269
EA+ F MK G P+ TM+ VL AC+ G + G W + + ++R G +
Sbjct: 350 VEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDG-WHYFRSMKRLFGIQPEREHHN 408
Query: 270 ALIDMYAKCG 279
++D+ + G
Sbjct: 409 CMVDLLGRAG 418
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 156/455 (34%), Positives = 234/455 (51%), Gaps = 38/455 (8%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I WN +I G+ S EAV +F+DM RG +P T VL A ++ L G+ +
Sbjct: 216 ISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGY 275
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM------------------------ 190
V K GL SD ++ L+ YG C + +VFD M
Sbjct: 276 VIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESS 335
Query: 191 -----------CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
E +VVSW +I C +N EA+ F +M+ G +P+ T+ +L A
Sbjct: 336 LRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPA 395
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C + L GK H + RG + +G+ALIDMYAKCG + +R+ F + N+ W
Sbjct: 396 CGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCW 455
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+A+I G A HG A+EA+E+F M+ S P+ ++F VL AC+ +G+ E+G YF+ M
Sbjct: 456 NAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSS 515
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
+GI+ HY M +L+RAG L++AY I MP P+ V ALLS+ +H+
Sbjct: 516 KYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHN---NVS 572
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
+G +L ELEP N ++++N YA GMW +V+ VR MKN GL+K G SW+E+
Sbjct: 573 LGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVK 632
Query: 480 GSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+H +G S ++ I + L+ L++ MK L +
Sbjct: 633 NKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLGY 667
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 193/406 (47%), Gaps = 56/406 (13%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP----WNNLI 101
Q HA I +GL ND + +L+ + N+ +A + L V D VP P ++ LI
Sbjct: 34 QAHAHILKTGLFNDTHLATKLLSH----YANNMCFADATL---VLDLVPEPNVFSFSTLI 86
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
++ + A+ F M RG+ P P +KACA +S L QV + SG D
Sbjct: 87 YAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFD 146
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV-----CVE--------- 207
SD + ++LV Y C + RDA +VFD M E VVSW+ ++ CV+
Sbjct: 147 SDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEM 206
Query: 208 -------NL--WLG------------EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNL 246
NL W G EAV F+ M GFEPD TT+ VL A +L +L
Sbjct: 207 GDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDL 266
Query: 247 SLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGL 306
+G +H +I++G V + + +ALIDMY KC +F +M+ ++V + +A I GL
Sbjct: 267 VMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGL 326
Query: 307 AQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPM 366
+++G E +L LF +K+ + N V++ ++ C+ G + F EM+ + G+KP
Sbjct: 327 SRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQ-IAGVKPN 385
Query: 367 RIHYHTMADILARAG------HLKEAYTFIMNMPFQPNPIVLRALL 406
+ T+ +L G H K A+ F + + V AL+
Sbjct: 386 SV---TIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALI 428
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 120/243 (49%), Gaps = 4/243 (1%)
Query: 143 SGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII 202
+ L++ Q A++ K+GL +D + L+ Y + DA V D + E +V S++ +I
Sbjct: 27 ASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLI 86
Query: 203 TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV 262
+ A+ F +M G PD + + AC L L + VH G
Sbjct: 87 YAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFD 146
Query: 263 LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM 322
+ + ++L+ MY KC + A +F RM E +V +WSA++ A+ G +EA LFS M
Sbjct: 147 SDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEM 206
Query: 323 KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGH 382
+S + PN +++ G++ NH+G+ + F +M H+ G +P T++ +L G
Sbjct: 207 GDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDM-HLRGFEP---DGTTISSVLPAVGD 262
Query: 383 LKE 385
L++
Sbjct: 263 LED 265
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 156/455 (34%), Positives = 234/455 (51%), Gaps = 38/455 (8%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I WN +I G+ S EAV +F+DM RG +P T VL A ++ L G+ +
Sbjct: 216 ISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGY 275
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM------------------------ 190
V K GL SD ++ L+ YG C + +VFD M
Sbjct: 276 VIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESS 335
Query: 191 -----------CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
E +VVSW +I C +N EA+ F +M+ G +P+ T+ +L A
Sbjct: 336 LRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPA 395
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C + L GK H + RG + +G+ALIDMYAKCG + +R+ F + N+ W
Sbjct: 396 CGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCW 455
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+A+I G A HG A+EA+E+F M+ S P+ ++F VL AC+ +G+ E+G YF+ M
Sbjct: 456 NAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSS 515
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
+GI+ HY M +L+RAG L++AY I MP P+ V ALLS+ +H+
Sbjct: 516 KYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHN---NVS 572
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
+G +L ELEP N ++++N YA GMW +V+ VR MKN GL+K G SW+E+
Sbjct: 573 LGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVK 632
Query: 480 GSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+H +G S ++ I + L+ L++ MK L +
Sbjct: 633 NKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGY 667
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 193/406 (47%), Gaps = 56/406 (13%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP----WNNLI 101
Q HA I +GL ND + +L+ + N+ +A + L V D VP P ++ LI
Sbjct: 34 QAHAHILKTGLFNDTHLATKLLSH----YANNMCFADATL---VLDLVPEPNVFSFSTLI 86
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
++ + A+ F M RG+ P P +KACA +S L QV + SG D
Sbjct: 87 YAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFD 146
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV-----CVE--------- 207
SD + ++LV Y C + RDA +VFD M E VVSW+ ++ CV+
Sbjct: 147 SDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEM 206
Query: 208 -------NL--WLG------------EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNL 246
NL W G EAV F+ M GFEPD TT+ VL A +L +L
Sbjct: 207 GDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDL 266
Query: 247 SLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGL 306
+G +H +I++G V + + +ALIDMY KC +F +M+ ++V + +A I GL
Sbjct: 267 VMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGL 326
Query: 307 AQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPM 366
+++G E +L LF +K+ + N V++ ++ C+ G + F EM+ + G+KP
Sbjct: 327 SRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQ-IAGVKPN 385
Query: 367 RIHYHTMADILARAG------HLKEAYTFIMNMPFQPNPIVLRALL 406
+ T+ +L G H K A+ F + + V AL+
Sbjct: 386 SV---TIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALI 428
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 120/243 (49%), Gaps = 4/243 (1%)
Query: 143 SGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII 202
+ L++ Q A++ K+GL +D + L+ Y + DA V D + E +V S++ +I
Sbjct: 27 ASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLI 86
Query: 203 TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV 262
+ A+ F +M G PD + + AC L L + VH G
Sbjct: 87 YAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFD 146
Query: 263 LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM 322
+ + ++L+ MY KC + A +F RM E +V +WSA++ A+ G +EA LFS M
Sbjct: 147 SDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEM 206
Query: 323 KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGH 382
+S + PN +++ G++ NH+G+ + F +M H+ G +P T++ +L G
Sbjct: 207 GDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDM-HLRGFEPDGT---TISSVLPAVGD 262
Query: 383 LKE 385
L++
Sbjct: 263 LED 265
>gi|115477555|ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|50725675|dbj|BAD33141.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113624342|dbj|BAF24287.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|215697775|dbj|BAG91968.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 581
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 166/468 (35%), Positives = 242/468 (51%), Gaps = 17/468 (3%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP------IPWNN 99
Q HA L +D+ +L L+ SS AR +L DS P + WN
Sbjct: 114 QFHALSLKLSLASDSFVLNALINM--YSSCNYPASARLVL-----DSAPRWASDVVSWNT 166
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
+I GY P +A+ F M + ++ E T VL ACA + G A V +G
Sbjct: 167 IIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNG 226
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
+ + Y ++LV Y C +A +VF+ M ER+VV W +I C ++ EAV F
Sbjct: 227 FEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFR 286
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
M+ G + D+ T+ V+S+C ++G L LG+++H G + +LIDMY+KCG
Sbjct: 287 DMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCG 346
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS-ISPNYVTFLGVL 338
V A +F + + +V+TW+ MI+G A +G EAL+LF+ M+ + PN V FLGVL
Sbjct: 347 DVNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVL 406
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
AC+H G+VE GY +FH M V+ + P HY M D+L RA L EA FI +MP P+
Sbjct: 407 TACSHGGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPD 466
Query: 399 PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
+V R+LL A A Q G+ R+ +LEP+ V+++N YA W V+NV
Sbjct: 467 VVVWRSLLFACR---ASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVYATTLRWVDVNNV 523
Query: 459 RRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
R M N K G S++E+ G IH F++G +S E I L +N
Sbjct: 524 RTGMGNSRTSKKPGCSFIEVDGCIHEFFAGDESHFETEAICNTLFGIN 571
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Query: 229 DETTMLVVLSACTELGNLSLGKWVH-----LQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
D ++ + +SA + +L +G H L L VLN ALI+MY+ C
Sbjct: 92 DNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLN-----ALINMYSSCNYPAS 146
Query: 284 ARLLFSRMEE--INVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
ARL+ +V +W+ +I G + G +AL+ F M + + VT L VL AC
Sbjct: 147 ARLVLDSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVAC 206
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
G ++ G H + ++G + ++ + A+ G ++EA MP
Sbjct: 207 ARTGAMKVG-SLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMP 258
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 144/388 (37%), Positives = 229/388 (59%), Gaps = 7/388 (1%)
Query: 121 KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRK 180
K ++P E T ++ ACA++ L G + + + GLD ++ NN ++ Y C
Sbjct: 3 KLDNLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDI 62
Query: 181 RDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
A +VF+ + E+ V+SW +++ ++ + E++ F KM+ EPDE T++ VLSAC
Sbjct: 63 ESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSAC 122
Query: 241 TELGNLSLGKWVHLQLIERGTVLNCQL--GTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
+ G L GK++HL LI++ + NC L TAL+DMYAKCG++ A +F RM NV+T
Sbjct: 123 AQTGALDQGKYIHL-LIDKFEI-NCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFT 180
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
W+AMI GLA HG+ E+A+ LF M+ + P+ VTF+ +LCAC+HAG+V++G F M+
Sbjct: 181 WNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMK 240
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD 418
+ I+P HY + D+L RA + +A FI NMP + N ++ LL A +
Sbjct: 241 NKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACR---SGGHF 297
Query: 419 GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVEL 478
+ ++ RR++ELEP V+++N YA V W+ +R+ MKN G++K G SW+EL
Sbjct: 298 DLAEKIXRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIEL 357
Query: 479 GGSIHRFYSGYDSQVELAGIYQILETLN 506
G IH+F +G S ++ IY ++E +
Sbjct: 358 NGMIHQFVAGDRSHLQTEQIYAMIEEMT 385
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 111/272 (40%), Gaps = 30/272 (11%)
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
N + + + W +++ G A S +E++ +F M+ I+P E T VL ACA+ L+
Sbjct: 70 NRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGALD 129
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
+G + + K ++ D+ LV Y C A +VF M R+V +WN +I
Sbjct: 130 QGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLA 189
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+ +A+ F +M+ PD+ T + +L AC+ H L++ G + Q
Sbjct: 190 MHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACS-----------HAGLVDEGLAM-FQ 237
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+ + GC L R +++ +AL NM +
Sbjct: 238 AMKNKFQIEPRMEHYGCVVDLLCRARKVD------------------DALAFIENMPIKA 279
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
S + T LG + H + E R E+E
Sbjct: 280 NSVLWATLLGACRSGGHFDLAEKIXRRVIELE 311
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 170/519 (32%), Positives = 275/519 (52%), Gaps = 42/519 (8%)
Query: 2 VRFPVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQ 61
+R P P++NH P+ L L+ C + L Q+HA + +GL
Sbjct: 1 MRGPNPSSNH-----PT-------------LQLLEKCKTLDTLKQVHAHMITTGLIFHTY 42
Query: 62 ILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFI--- 118
L R +SS+ T+A SI N++ + +N LI A + +P + +
Sbjct: 43 ---PLSRILLISSTIVFTHALSIF-NHIPNPTIFLYNTLISSLA-NIKPHTHIAFSLYSR 97
Query: 119 DMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS-DVYTNNNLVRFYGSC 177
+ +KP FT+P + KAC L G + +V K + D + L+ +Y C
Sbjct: 98 VLTHTTLKPNGFTFPSLFKACGSQPWLRHGRALHTHVLKFLEPTCDPFVQAALLNYYAKC 157
Query: 178 RRKRDACK-VFDDMCERSVVSWNVIITVCVEN---------LWLGEAVGYFVKMKDLGFE 227
K AC+ +F+ + + + SWN I++ V N L L E + F++M+ +
Sbjct: 158 G-KVGACRYLFNQISKPDLASWNSILSAYVHNSGAICEDVSLSL-EVLTLFIEMQKSLIK 215
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
+E T++ ++SAC ELG LS G W H+ +++ LN +GTALIDMY+KCG + A L
Sbjct: 216 ANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQL 275
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMV 347
F ++ + ++AMI G A HGY +AL+LF M ++P+ VT + +C+C+H G+V
Sbjct: 276 FDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTLVVTMCSCSHVGLV 335
Query: 348 EDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLS 407
E+G F M+ V+G++P HY + D+L RAG L+EA ++NMP +PN ++ R+LL
Sbjct: 336 EEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMPMKPNAVIWRSLLG 395
Query: 408 ASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGL 467
A+ +H +G V + L++LEP S N V+++N YA + W+ V VR+ MK+ G+
Sbjct: 396 AARVHG---NLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRKLMKDHGI 452
Query: 468 KKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
K+ G S VE+GG++H F G + IY LE ++
Sbjct: 453 NKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMS 491
>gi|255641766|gb|ACU21153.1| unknown [Glycine max]
Length = 529
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 163/476 (34%), Positives = 251/476 (52%), Gaps = 11/476 (2%)
Query: 34 FLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSV 93
L LC + ++ + HAQ+ V G + D I L+ S NL +AR + N V
Sbjct: 26 LLNLCKTTDNVKKAHAQVVVRGHEQDPFIAARLID--KYSHFSNLDHARKVFDNLSEPDV 83
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
N +I+ YA +D EA+ V M+ RGI P +TYPFVLKAC +G +
Sbjct: 84 -FCCNVVIKVYANADPFGEALKVHDAMRWRGITPNYYTYPFVLKACGAEGASKKGRVIHE 142
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+ K G+D D++ N LV FY C+ + KVFD++ R +VSWN +++ N ++ +
Sbjct: 143 HAVKCGMDLDLFVGNALVAFYAKCQDVEVSRKVFDEIPHRDIVSWNSMVSGYTVNGYVDD 202
Query: 214 AVGYFVKM---KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
A+ F M + +G PD T + VL A + ++ G W+H +++ L+ +GT
Sbjct: 203 AILLFYDMLRDESVG-GPDHATFVTVLPAFAQAADIHAGYWIHCYIVKTRMGLDSAVGTG 261
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
LI +Y+ CG V AR +F R+ + +V WSA+I HG A+EAL LF + + + P+
Sbjct: 262 LISLYSNCGYVRMARAIFDRISDRSVIVWSAIIRCYGTHGLAQEALALFRQLVGAGLRPD 321
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
V FL +L AC+HAG++E G+ F+ ME +G+ HY + D+L RAG L++A FI
Sbjct: 322 GVVFLCLLSACSHAGLLEQGWHLFNAME-TYGVAKSEAHYACIVDLLGRAGDLEKAVEFI 380
Query: 391 MNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVG 450
+MP QP + ALL A IH + E +L L+P + VI+A Y +
Sbjct: 381 QSMPIQPGKNIYGALLGACRIHKNMELAELAAE---KLFVLDPDNAGRYVILAQMYEDAE 437
Query: 451 MWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
W + VR+ +K+ +KK G S VEL +F ++ V I+QIL +L+
Sbjct: 438 RWLDAARVRKVVKDKEIKKPIGYSSVELESGHQKFGVNDETHVHTTQIFQILHSLD 493
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 152/449 (33%), Positives = 246/449 (54%), Gaps = 12/449 (2%)
Query: 68 RFCTL-----SSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKR 122
RFC S +L A+++ + SV + + ++I GYA EAV +F +M+
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSV-VSYTSMIAGYAREGLAGEAVKLFEEMEE 239
Query: 123 RGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRD 182
GI P +T VL CA L+EG +V + ++ L D++ +N L+ Y C ++
Sbjct: 240 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 299
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF-VKMKDLGFEPDETTMLVVLSACT 241
A VF +M + ++SWN II +N + EA+ F + +++ F PDE T+ VL AC
Sbjct: 300 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 359
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
L G+ +H ++ G + + +L+DMYAKCGA+ A +LF + ++ +W+
Sbjct: 360 SLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTV 419
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
MI G HG+ +EA+ LF+ M+ + I + ++F+ +L AC+H+G+V++G+R+F+ M H
Sbjct: 420 MIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHEC 479
Query: 362 GIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSI-HDAKYQDGV 420
I+P HY + D+LAR G L +AY FI NMP P+ + ALL I HD K +
Sbjct: 480 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVK----L 535
Query: 421 GNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGG 480
+V ++ ELEP + V++AN YAE WE+V +R+ + GL+K G SW+E+ G
Sbjct: 536 AEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKG 595
Query: 481 SIHRFYSGYDSQVELAGIYQILETLNLHM 509
++ F +G S E I L + M
Sbjct: 596 RVNIFVAGDSSNPETENIEAFLRKVRARM 624
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 149/290 (51%), Gaps = 1/290 (0%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN L+ A S ++ +F M G++ +T+ V K+ + + ++ G Q+ +
Sbjct: 12 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 71
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
KSG N+LV FY +R A KVFD+M ER V+SWN II V N + +
Sbjct: 72 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 131
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
FV+M G E D T++ V + C + +SLG+ VH ++ + L+DMY+
Sbjct: 132 VFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 191
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KCG + A+ +F M + +V ++++MI G A+ G A EA++LF M+ ISP+ T
Sbjct: 192 KCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTA 251
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
VL C ++++G R HE + + + + D+ A+ G ++EA
Sbjct: 252 VLNCCARYRLLDEGKR-VHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 300
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 157/339 (46%), Gaps = 5/339 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+H I SG + LV F ++ + AR + V I WN++I GY
Sbjct: 65 QLHGFILKSGFGERNSVGNSLVAFYL--KNQRVDSARKVFDEMTERDV-ISWNSIINGYV 121
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ + + VF+ M GI+ T V CA+ ++ G V + K+ +
Sbjct: 122 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 181
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N L+ Y C A VF +M +RSVVS+ +I GEAV F +M++ G
Sbjct: 182 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 241
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
PD T+ VL+ C L GK VH + E + + AL+DMYAKCG++ A
Sbjct: 242 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 301
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS-NMKNSSISPNYVTFLGVLCACNHA 344
L+FS M ++ +W+ +I G +++ YA EAL LF+ ++ SP+ T VL AC
Sbjct: 302 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 361
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+ G R H +G R +++ D+ A+ G L
Sbjct: 362 SAFDKG-REIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 399
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 111/249 (44%), Gaps = 8/249 (3%)
Query: 187 FDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNL 246
FD++ + WN+++ ++ ++G F KM G E D T V + + L ++
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 247 SLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGL 306
G+ +H +++ G +G +L+ Y K V AR +F M E +V +W+++I G
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 307 AQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPM 366
+G AE+ L +F M S I + T + V C + ++ G R H +
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG-RAVHSIGVKACFSRE 179
Query: 367 RIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRR 426
+T+ D+ ++ G L A M R+++S +S+ ++G+ E +
Sbjct: 180 DRFCNTLLDMYSKCGDLDSAKAVFREMS-------DRSVVSYTSMIAGYAREGLAGEAVK 232
Query: 427 RLLELEPRG 435
E+E G
Sbjct: 233 LFEEMEEEG 241
>gi|242073754|ref|XP_002446813.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
gi|241937996|gb|EES11141.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
Length = 547
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 171/519 (32%), Positives = 259/519 (49%), Gaps = 55/519 (10%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
++ L+ C + + L + H L + + ++V C + R+ V
Sbjct: 14 IARLRACATFRDLLRAHGLAVRLCLSQSSYVATQIVHVCN-------GHGRAAHAARVFA 66
Query: 92 SVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTE---------FTYPFVLKA 138
VP P N +I+ YA + R+AV V++ M R P+ FTYPF+LKA
Sbjct: 67 HVPAPNLHLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPDPSSSGGFSVGDRFTYPFLLKA 126
Query: 139 CAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSW 198
C ++ G QV A+V +SG +S N+L+ Y C A KVFD M E+ VSW
Sbjct: 127 CGGLAASQLGRQVHAHVARSGCESHAIVQNSLIEMYTRCGDLSLARKVFDGMREKDAVSW 186
Query: 199 NVIITVCVEN-------------------LWLGEAVGY------------FVKMKDLGFE 227
N +I+ W GY F +M+ GFE
Sbjct: 187 NTLISAHARMGQMRKARELFHSMPDKTVVSWTALVSGYTAVGDFAGAVEVFRQMQMEGFE 246
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
PD+ +++ VL AC +LG L LG+W++ + G + + AL++MYAKCG + A L
Sbjct: 247 PDDVSIVAVLPACAQLGALELGRWIYAYCNKHGMLGKIYICNALMEMYAKCGCIEEALQL 306
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGM 346
F M E +V +WS I GLA HG A EA++LF M + + PN +TF+G+L AC+HAG+
Sbjct: 307 FHGMSEKDVISWSTAIGGLAAHGRAREAVKLFEVMDREGRVMPNGITFVGLLSACSHAGL 366
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALL 406
+++G RYF M+ +G++P HY + D+L R+G ++ A I MP P+ + +LL
Sbjct: 367 LDEGLRYFDRMKEEYGVEPSVEHYGCVVDLLGRSGRIQRALDTIGGMPIPPDGKIWGSLL 426
Query: 407 SASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVG 466
SA H V E RL+ELEP NLV++AN YA G W V++ R+ +++
Sbjct: 427 SACRSHSDVDTAVVAAE---RLVELEPEDVGNLVMLANVYAAAGRWGNVASTRKEIRSRS 483
Query: 467 LKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+K G S +E+ + F +G D EL GI I++ L
Sbjct: 484 TRKTPGCSMIEVDNVVREFVAGEDLGPELGGIAAIIDIL 522
>gi|222619002|gb|EEE55134.1| hypothetical protein OsJ_02921 [Oryza sativa Japonica Group]
Length = 493
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/468 (35%), Positives = 242/468 (51%), Gaps = 17/468 (3%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP------IPWNN 99
Q HA L +D+ +L L+ SS AR +L DS P + WN
Sbjct: 26 QFHALSLKLSLASDSFVLNALINM--YSSCNYPASARLVL-----DSAPRWASDVVSWNT 78
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
+I GY P +A+ F M + ++ E T VL ACA + G A V +G
Sbjct: 79 IIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNG 138
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
+ + Y ++LV Y C +A +VF+ M ER+VV W +I C ++ EAV F
Sbjct: 139 FEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFR 198
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
M+ G + D+ T+ V+S+C ++G L LG+++H G + +LIDMY+KCG
Sbjct: 199 DMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCG 258
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS-ISPNYVTFLGVL 338
V A +F + + +V+TW+ MI+G A +G EAL+LF+ M+ + PN V FLGVL
Sbjct: 259 DVNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVL 318
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
AC+H G+VE GY +FH M V+ + P HY M D+L RA L EA FI +MP P+
Sbjct: 319 TACSHGGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPD 378
Query: 399 PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
+V R+LL A A Q G+ R+ +LEP+ V+++N YA W V+NV
Sbjct: 379 VVVWRSLLFACR---ASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVYATTLRWVDVNNV 435
Query: 459 RRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
R M N K G S++E+ G IH F++G +S E I L +N
Sbjct: 436 RTGMGNSRTSKKPGCSFIEVDGCIHEFFAGDESHFETEAICNTLFGIN 483
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Query: 229 DETTMLVVLSACTELGNLSLGKWVH-----LQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
D ++ + +SA + +L +G H L L VLN ALI+MY+ C
Sbjct: 4 DNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLN-----ALINMYSSCNYPAS 58
Query: 284 ARLLFSRMEE--INVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
ARL+ +V +W+ +I G + G +AL+ F M + + VT L VL AC
Sbjct: 59 ARLVLDSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVAC 118
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
G ++ G H + ++G + ++ + A+ G ++EA MP
Sbjct: 119 ARTGAMKVG-SLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMP 170
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 168/480 (35%), Positives = 246/480 (51%), Gaps = 23/480 (4%)
Query: 48 HAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPWNNLIRG 103
H Q V G + D + L+ S L AR++ D +P + W ++I G
Sbjct: 1165 HQQAFVFGFETDLFVSSALIDM--YSKCGQLKDARALF-----DEIPLRNVVSWTSMITG 1217
Query: 104 YAWSDRPREAVWVFIDMKRR--------GIKPTEFTYPFVLKACAEISGLNEGMQVQANV 155
Y +++ A+ +F D + VL AC+ +SG V V
Sbjct: 1218 YVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFV 1277
Query: 156 TKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
K G D + N L+ Y C + + KVFD M E+ +SWN +I V ++ GEA+
Sbjct: 1278 VKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEAL 1337
Query: 216 GYFVKM-KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
F M + +G + T+ VL AC G L GK +H Q+I+ N +GT++IDM
Sbjct: 1338 EVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDM 1397
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y KCG V A+ F RM+E NV +W+AM+ G HG A+EAL++F M + + PNY+TF
Sbjct: 1398 YCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITF 1457
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ VL AC+HAG+VE+G+ +F+ M+H + I+P HY M D+ RAG L EAY I M
Sbjct: 1458 VSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMK 1517
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
+P+ +V +LL A IH K D +G ++L EL+P V+++N YA+ G W
Sbjct: 1518 MKPDFVVWGSLLGACRIH--KNVD-LGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWAD 1574
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
V +R MKN L K G S VEL G +H F G IY+ LE L L ++ + +
Sbjct: 1575 VERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGY 1634
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 143/411 (34%), Positives = 218/411 (53%), Gaps = 36/411 (8%)
Query: 9 TNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVR 68
T+ +FP K +A++ L L+ C + KHL QIHA+I SGL ND + ++L+
Sbjct: 8 THDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIH 67
Query: 69 FCTLSSSKNLTYARSILCNY-VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKP 127
S+ + YA IL Y + + WN +IR + +A+ ++ +M +GI
Sbjct: 68 L--YSTHGRIAYA--ILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAA 123
Query: 128 TEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVF 187
+FT+PFV+KAC ++ G V ++ K G DV+ NNL+ FY C R A KVF
Sbjct: 124 DKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVF 183
Query: 188 DDMCERSVVSWNVIIT---VC----------------------------VENLWLGEAVG 216
+ M R+VVSW +I+ C + N EA+
Sbjct: 184 EKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALE 243
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F +M+ P+E TM+ ++ ACTE+G L+LG+ +H I+ + LGTALIDMY+
Sbjct: 244 LFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYS 303
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KCG++ A +F M ++ TW++MI L HG +EAL LFS M+ ++ P+ +TF+G
Sbjct: 304 KCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIG 363
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
VLCAC H V++G YF M +GI P+ HY M ++ AR+ +L EA+
Sbjct: 364 VLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAF 414
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 143/272 (52%), Gaps = 9/272 (3%)
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
YV+ S WN++I A EA+ F +++ G+ PT ++P +K+C+ + L
Sbjct: 1101 YVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVS 1160
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G G ++D++ ++ L+ Y C + +DA +FD++ R+VVSW +IT V+
Sbjct: 1161 GRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQ 1220
Query: 208 NLWLGEAVGYF-------VKMKDLGFEP-DETTMLVVLSACTELGNLSLGKWVHLQLIER 259
N A+ F +++D P D M+ VLSAC+ + + + VH ++++
Sbjct: 1221 NEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKK 1280
Query: 260 GTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELF 319
G + +G L+D YAKCG ++ +F MEE + +W++MI AQ G + EALE+F
Sbjct: 1281 GFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVF 1340
Query: 320 SNM-KNSSISPNYVTFLGVLCACNHAGMVEDG 350
M ++ + N VT VL AC HAG + G
Sbjct: 1341 HGMVRHVGVRYNAVTLSAVLLACAHAGALRAG 1372
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 141/330 (42%), Gaps = 42/330 (12%)
Query: 134 FVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER 193
F+L+ C L Q+ A + +SGL +D L+ Y + R A +F +
Sbjct: 32 FLLQNCKNFKHLR---QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNP 88
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
+WN+II N +A+ + M G D+ T V+ ACT ++ LGK VH
Sbjct: 89 CTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVH 148
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCG--------------------------AVGC---- 283
LI+ G + + LID Y KCG + C
Sbjct: 149 GSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQ 208
Query: 284 -ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
AR +F + NV +W+AMI G ++ EEALELF M+ +I PN T + ++ AC
Sbjct: 209 EARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACT 268
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVL 402
G++ G R H+ + I+ + D+ ++ G +K+A MP + P
Sbjct: 269 EMGILTLG-RGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLP-TW 326
Query: 403 RALLSASSIHDAKYQDGVGNEVRRRLLELE 432
+++++ +H G+G E E+E
Sbjct: 327 NSMITSLGVH------GLGQEALNLFSEME 350
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A + +++ NV +W+++I LA+ G + EAL FS+++ + P +F + +C+
Sbjct: 1095 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 1154
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
+ G R H+ V G + + D+ ++ G LK+A +P +
Sbjct: 1155 LCDLVSG-RMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR 1206
>gi|449470352|ref|XP_004152881.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 159/462 (34%), Positives = 252/462 (54%), Gaps = 6/462 (1%)
Query: 25 LSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSI 84
+S + L+ L+ C S K L +IHA + VSGL + I +L+ FC +S S +L YA+ +
Sbjct: 1 MSNEKAILALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQ-L 59
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIK-PTEFTYPFVLKACAEIS 143
L + + WN++IRG+A S P +A+ + M P FT+ FVLKAC I
Sbjct: 60 LFHQMECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIK 119
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
+ +V +V + G D+DV NLV+ Y + A +VFD M R +V+WN +I+
Sbjct: 120 AERKCKEVHGSVIRCGYDADVIVCTNLVKCYSAMGSVCIARQVFDKMPARDLVAWNAMIS 179
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
+ EA+ + +M+ + D T++ ++S+C LG L++G +H E G
Sbjct: 180 CFSQQGLHQEALQTYNQMRSENVDIDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQ 239
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
+ +G ALIDMYAKCG++ A L+F RM+ +++TW++MI+G HG EA+ F M
Sbjct: 240 SLYVGNALIDMYAKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQML 299
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+ I PN VTFLG+LC C+H G+V++G +YF+ M +KP HY + D+ RAG L
Sbjct: 300 EARIQPNPVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKL 359
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
+A + N + ++ R LL + IH +G RL EL + + +++A
Sbjct: 360 DKALEIVSNSS-HNDSVLWRILLGSCKIHK---NVTIGEIAMNRLSELGATSAGDCILLA 415
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRF 485
YA V+ +R+ +K+ G K G SW+E+G +H+F
Sbjct: 416 TIYAGEKDKAGVARMRKMIKSQGKKTTPGWSWIEIGEQVHKF 457
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 229/430 (53%), Gaps = 35/430 (8%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN++I G EA+ ++ +M+ ++P E T ++ +C+++ LN G +
Sbjct: 225 VTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCY 284
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC----------------------- 191
+ + GL+ + N L+ Y C A +FD+M
Sbjct: 285 IKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVA 344
Query: 192 --------ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
E+SVV WN II+ CV+ EA+ F +M+ EPD+ TM+ LSAC++L
Sbjct: 345 REILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQL 404
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
G L +G W+H + ++ LGTAL+DMYAKCG + A +F + + N TW+A+I
Sbjct: 405 GALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVI 464
Query: 304 LGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
GLA HG A++AL FS M + I P+ +TFLGVL AC H G+VE+G +YF EM +
Sbjct: 465 CGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNV 524
Query: 364 KPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNE 423
P HY M D+L RAGHL+EA + NMP + VL AL A ++ +G
Sbjct: 525 SPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYG---NVQIGER 581
Query: 424 VRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIH 483
+LLE++P+ S N V++A+ Y+E MW++ + R+ M + G++K G S VE+ G +H
Sbjct: 582 TAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVEINGIVH 641
Query: 484 RF-YSGYDSQ 492
F YD Q
Sbjct: 642 EFVLPPYDGQ 651
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/413 (30%), Positives = 192/413 (46%), Gaps = 35/413 (8%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LS L+ C S L QI AQ+ +GL + LV FC LS SK L Y IL
Sbjct: 61 LSILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIKEL 120
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEISGLNEGMQ 150
+V WN IRGY S ++ M G +KP TYP +LK C G+
Sbjct: 121 NV-FSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLG 179
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
V +V K G + D++ +N + SC A VF+ R +V+WN +IT CV+
Sbjct: 180 VLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGL 239
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
EA+ + +M+ P+E TM+ ++S+C+++ +L+LGK H + E G L A
Sbjct: 240 AIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNA 299
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY------------------- 311
L+DMY KCG + AR+LF M + + +W+ M+LG A+ G+
Sbjct: 300 LMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPW 359
Query: 312 ------------AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+EAL LF M+ +I P+ VT + L AC+ G ++ G H +E
Sbjct: 360 NAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIER 419
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
H + + D+ A+ G++ A +P Q N + A++ ++H
Sbjct: 420 -HKLSIDVALGTALVDMYAKCGNIARALQVFEEIP-QRNCLTWTAVICGLALH 470
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 124/280 (44%), Gaps = 44/280 (15%)
Query: 78 LTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLK 137
L AR IL SV +PWN +I G + + +EA+ +F +M+ R I+P + T L
Sbjct: 341 LDVAREILYKIPEKSV-VPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLS 399
Query: 138 ACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS 197
AC+++ L+ G+ + + + L DV LV Y C A +VF+++ +R+ ++
Sbjct: 400 ACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLT 459
Query: 198 WNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLI 257
W +I + +A+ YF KM +G PDE T L VLSAC H L+
Sbjct: 460 WTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSAC-----------CHGGLV 508
Query: 258 ERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM-EEINVWT----WSAMILGLAQHGYA 312
E G R FS M + NV +S M+ L + G+
Sbjct: 509 EEG------------------------RKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHL 544
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR 352
EEA EL NM ++ + + AC G V+ G R
Sbjct: 545 EEAEELVKNMP---MAADAAVLGALFFACRVYGNVQIGER 581
>gi|357487543|ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
gi|355515394|gb|AES97017.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
Length = 565
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 162/460 (35%), Positives = 256/460 (55%), Gaps = 24/460 (5%)
Query: 72 LSSSKNLTYARSI---LCNYVNDSVPIPWNNLIRGYAWSD-RPREAVWVF---IDMKRRG 124
L+ S ++++ + I + ++ WN LI+ Y+ S ++A+ ++ I +
Sbjct: 21 LNQSNSISHVKQIHAQILRTIHTPNSFTWNILIQSYSKSTLHKQKAILLYKAIITEQENE 80
Query: 125 IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDAC 184
+ P + TYPFVLKACA + L EG QV A+V K G + D Y N+L+ FY SC A
Sbjct: 81 LFPDKHTYPFVLKACAYLFSLFEGKQVHAHVLKLGFELDTYICNSLIHFYASCGYLETAR 140
Query: 185 KVFDDMCE-RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
KVFD MCE R+VVSWNV+I + + F +M + +EPD TM V+ AC L
Sbjct: 141 KVFDRMCEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEMMKV-YEPDCYTMQSVIRACGGL 199
Query: 244 GNLSLGKWVH---LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
G+LSLG WVH L+ ++ V + + T L+DMY KCG++ A+ +F M +V +W+
Sbjct: 200 GSLSLGMWVHAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWN 259
Query: 301 AMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
++ILG A HG A+ AL+ F M K I PN +TF+GVL ACNH+GMV++G YF M
Sbjct: 260 SIILGFAVHGKAKAALDYFVRMVKVEKIVPNSITFVGVLSACNHSGMVDEGLMYFEMMTK 319
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
+ ++P +HY + D+ ARAGH++EA + MP +P+ ++ R+LL DA Y+
Sbjct: 320 EYNVEPSLVHYGCLVDLYARAGHIQEALNVVSEMPIKPDAVIWRSLL------DACYKQH 373
Query: 420 VGNEVRRRLLE--LEPRGS---QNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMS 474
E+ + + E GS V+++ YA W V +R+ M + G+ K G S
Sbjct: 374 ASVELSEEMAKQIFESNGSVCGGAYVLLSKVYASASRWNDVGLLRKLMNDKGVSKKPGCS 433
Query: 475 WVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+E+ G+ H F++G + + IY+ + + ++ + +
Sbjct: 434 LIEINGAAHEFFAGDTNHPQSKDIYKFMNEIQEKLESVGY 473
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 184/572 (32%), Positives = 274/572 (47%), Gaps = 111/572 (19%)
Query: 35 LKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP 94
L C + + QIHAQ+ + L D + +L+ S ++L A ++ + VP
Sbjct: 28 LHKCTNLDSVNQIHAQVLKANLHQDLFVAPKLI--AAFSLCRHLASAVNVF-----NHVP 80
Query: 95 IP----WNNLIRGYAWSDRPREAVW-VFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
P +N++IR +A + R + F M++ G+ P FTYPF+LKAC+ S L
Sbjct: 81 HPNVHLYNSIIRAHAHNSSHRSLPFNAFFQMQKNGLFPDNFTYPFLLKACSGPSSLPLVR 140
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSC--------------RRKRD------------- 182
+ A+V K G D++ N+L+ Y C +RD
Sbjct: 141 MIHAHVEKIGFYGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGGLVR 200
Query: 183 ------ACKVFDDMCERSVVSWNVIIT-----------------------------VC-- 205
ACK+FD+M +R +VSWN ++ VC
Sbjct: 201 CGELQGACKLFDEMPDRDMVSWNTMLDGYAKAGEMDTAFELFERMPWRNIVSWSTMVCGY 260
Query: 206 -----------------VEN--LWLGEAVGY------------FVKMKDLGFEPDETTML 234
V+N LW GY + KM++ G PD+ +L
Sbjct: 261 SKGGDMDMARMLFDRCPVKNVVLWTTIIAGYAEKGLAREATELYGKMEEAGMRPDDGFLL 320
Query: 235 VVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFS-RMEE 293
+L+AC E G L LGK +H + ++ A IDMYAKCG + A +FS M +
Sbjct: 321 SILAACAESGMLGLGKRIHASMRRWRFRCGAKVLNAFIDMYAKCGCLDAAFDVFSGMMAK 380
Query: 294 INVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRY 353
+V +W++MI G A HG+ E+ALELFS M P+ TF+G+LCAC HAG+V +G +Y
Sbjct: 381 KDVVSWNSMIQGFAMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCACTHAGLVNEGRKY 440
Query: 354 FHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHD 413
F+ ME V+GI P HY M D+L R GHLKEA+ + +MP +PN I+L LL+A +H+
Sbjct: 441 FYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAIILGTLLNACRMHN 500
Query: 414 AKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGM 473
+ V +L +LEP N +++N YA+ G W V+NVR MKN G +K G
Sbjct: 501 ---DVDLARAVCEQLFKLEPSDPGNYSLLSNIYAQAGDWMNVANVRLQMKNTGGEKPSGA 557
Query: 474 SWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
S +E+ +H F S + IYQ+++ L
Sbjct: 558 SSIEVEEEVHEFTVFDQSHPKSDDIYQMIDRL 589
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 178/573 (31%), Positives = 280/573 (48%), Gaps = 74/573 (12%)
Query: 8 TTNHI---FPPKPSNCNSDLLSKARQCLSFLKLCCSK-----KHLYQIHAQIQVSGLQND 59
+T+H+ F P + ++ + + LKL SK ++L Q+H + SG D
Sbjct: 5 STSHLPSPFKPVDFSAEKNIPTSKLPQKTVLKLFDSKSITSLQYLTQLHGLVLRSGHFQD 64
Query: 60 AQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFID 119
+ L++ N +A + + N +V I WN +I+G +++ +A++ +
Sbjct: 65 HYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFI-WNIVIKGCLENNKLFKAIYFYGR 123
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGL------------------- 160
M +P +FTYP + KAC+ + EG Q+ +V K G+
Sbjct: 124 MVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGR 182
Query: 161 -----------DSDVYTNNNLVRFYGSCR------------------------------- 178
+SDV N ++ Y C
Sbjct: 183 LEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGG 242
Query: 179 RKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
DA K+FD+M ER +SW+ ++ + EA+ F +M+ P + VL+
Sbjct: 243 NLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLA 302
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
AC+ +G + G+WVH L L+ LGTAL+DMYAKCG + +F M+E ++T
Sbjct: 303 ACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFT 362
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
W+AMI GLA HG AE+ALELFS ++ + PN +T +GVL AC HAG V+ G R F M
Sbjct: 363 WNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMR 422
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD 418
+G+ P HY M D+L R+G EA I +MP +PN V ALL A IH
Sbjct: 423 EFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHG---NF 479
Query: 419 GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVEL 478
+ V + LLELEP+ S V+++N YA+VG ++ VS +R+ MK+ G+K + G+S V+L
Sbjct: 480 DLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDL 539
Query: 479 GGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
G++H F G S ++ IY+ L+ + +++
Sbjct: 540 NGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQM 572
>gi|255586940|ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525897|gb|EEF28314.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 175/532 (32%), Positives = 274/532 (51%), Gaps = 40/532 (7%)
Query: 12 IFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCT 71
+ PP P+ S L+S K C + K L +IH+Q+ +GL D ++ FC
Sbjct: 7 LLPPSPATI-SKLISDQTYLSMLDKNCTTMKDLKKIHSQLIKTGLAKDTNAASRILAFCA 65
Query: 72 LSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRG-IKPTEF 130
S + ++ YA + N ++ WN +IRG++ S P+ ++ ++IDM ++P
Sbjct: 66 -SPAGDINYAYLVFVQIQNPNI-FAWNTIIRGFSRSSVPQNSISLYIDMLLTSPVQPQRL 123
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD-- 188
TYP V KA A++ +EG Q+ + K GL++D + N ++ Y +C +A KVFD
Sbjct: 124 TYPSVFKAFAQLDLASEGAQLHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVFDRG 183
Query: 189 -----------------------------DMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
M R+ VSWN +I+ V N +A+ F
Sbjct: 184 MDFDIVAWNTMIMGVAKCGLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELFQ 243
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
KM+ EP E TM+ +L+AC LG + G+W+H ++++ LN + TA+IDMY+KCG
Sbjct: 244 KMQVERIEPSEFTMVSLLNACACLGAIRQGEWIHDYMVKKKFELNPIVVTAIIDMYSKCG 303
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
++ A +F + W++MILGLA +G EAL+LFS +++S + P+ V+F+ VL
Sbjct: 304 SIDKAVQVFQSAPRRGLSCWNSMILGLAMNGQENEALQLFSVLQSSDLRPDDVSFIAVLT 363
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
AC+H GMV+ YF M + IKP H+ M D+L RAG L+EA I +M P+
Sbjct: 364 ACDHTGMVDKAKDYFLLMRDKYKIKPGIKHFSCMVDVLGRAGLLEEAEELIRSMHVDPDA 423
Query: 400 IVLRALL-SASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
I+ +LL S + K N L+EL P S + V+VAN YA +E+
Sbjct: 424 IIWGSLLWSCCKYGNIKMAKRAANH----LIELNPSESSSFVLVANAYAAANNFEEALKE 479
Query: 459 RRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
R +K + K G S +E+GG +H F +G + E+ IY++L+ L L K
Sbjct: 480 RLTLKENHIGKEPGCSCIEVGGEVHEFVAGGRAHPEIKEIYRVLDVLTLTNK 531
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 174/497 (35%), Positives = 256/497 (51%), Gaps = 30/497 (6%)
Query: 29 RQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
+ C + L K Q H Q V G ++D + L+ S L+ AR +
Sbjct: 90 KSCSALFDLNSGK----QAHQQALVFGFESDLFVSSALIDM--YSKCGKLSNARVLF--- 140
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDM---------KRRGIKPTEFTYPFV 135
D +P + W +LI GY +D EA+ VF + + G V
Sbjct: 141 --DEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISV 198
Query: 136 LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSV 195
L AC+ +S V K GLD + N L+ Y C + KVFDDM E+ V
Sbjct: 199 LSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDV 258
Query: 196 VSWNVIITVCVENLWLGEAVGYFVKM-KDLGFEPDETTMLVVLSACTELGNLSLGKWVHL 254
VSWN +I V +N +A F M K G + +E T+ +L AC G L +G +H
Sbjct: 259 VSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHD 318
Query: 255 QLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEE 314
Q+I+ G V N + T++IDMY KCG AR F M+E NV +W+AMI G HG+A E
Sbjct: 319 QVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFARE 378
Query: 315 ALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMA 374
AL++F M + + PNY+TF+ VL AC+HAG +E+G+R+F+ M H + ++P HY M
Sbjct: 379 ALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMV 438
Query: 375 DILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVR-RRLLELEP 433
D+L RAG++KEAY I +M + + ++ +LL+A IH +D E+ R L +L+P
Sbjct: 439 DLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIH----KDVELAEISARELFKLDP 494
Query: 434 RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQV 493
V++AN YA+ G W+ V +R +K+ GL K G S VEL G +H F G
Sbjct: 495 SNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHP 554
Query: 494 ELAGIYQILETLNLHMK 510
+ IY+ LE L++ ++
Sbjct: 555 QHEKIYKYLEELSVKLQ 571
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 148/292 (50%), Gaps = 11/292 (3%)
Query: 69 FCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPT 128
F T +++ N T ++ Y + + WN+LI A E++ F M++ IKP
Sbjct: 23 FSTTAAATN-TNLTTLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPN 81
Query: 129 EFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD 188
T+P +K+C+ + LN G Q G +SD++ ++ L+ Y C + +A +FD
Sbjct: 82 RSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFD 141
Query: 189 DMCERSVVSWNVIITVCVENLWLGEAVGYFVKM---------KDLGFEPDETTMLVVLSA 239
++ R++V+W +IT V+N EA+ F + +++G D M+ VLSA
Sbjct: 142 EIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSA 201
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C+ + N ++ + VH I+ G + L+D YAKCG V +R +F M E +V +W
Sbjct: 202 CSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSW 261
Query: 300 SAMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGMVEDG 350
++MI AQ+G + +A E+F M K N VT +L AC H G + G
Sbjct: 262 NSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVG 313
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 173/463 (37%), Positives = 246/463 (53%), Gaps = 9/463 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HA++ VSGL DA + LV +S ++ AR + N WN LIR YA
Sbjct: 84 QLHARLLVSGLGLDAVLATRLVDL--YASCGLVSVARRLFDEMPNQGNVFLWNVLIRAYA 141
Query: 106 WSDRPREA-VWVFIDMKRRG-IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD 163
D PREA + ++ +M G ++P FTYP VLKACA + L G +V V ++ +D
Sbjct: 142 -RDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRVMRTSWAAD 200
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
V+ L+ Y C +A VFD R V WN +I C +N EA+ M
Sbjct: 201 VFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAEALALCRNMAA 260
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G P T++ +SA + G L G+ +H RG +L T+L+DMYAK G V
Sbjct: 261 EGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTV 320
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN-SSISPNYVTFLGVLCACN 342
AR+LF ++ + +W+AMI G HG+A+ A ELF M+N + + P+++TF+GVL ACN
Sbjct: 321 ARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNEAQVMPDHITFVGVLSACN 380
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVL 402
H GMV++ F M V+ IKPM HY + D+L +G KEA I M +P+ +
Sbjct: 381 HGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIW 440
Query: 403 RALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFM 462
ALL+ IH + +L+ELEP + N V+++N YA+ G WE+ + VR+ M
Sbjct: 441 GALLNGCKIHK---NVELAELALHKLIELEPEDAGNYVLLSNIYAQSGKWEEAARVRKLM 497
Query: 463 KNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
N GLKK+ SW+EL G H F G S IY+ LE L
Sbjct: 498 TNRGLKKIIACSWIELKGKSHGFLVGDASHPRSDEIYEELERL 540
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 97/206 (47%), Gaps = 2/206 (0%)
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
Y +L++C + G Q+ A + SGL D LV Y SC A ++FD+M
Sbjct: 66 YATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEMP 125
Query: 192 ER-SVVSWNVIITVCVENLWLGEAVGYFVKMKDLG-FEPDETTMLVVLSACTELGNLSLG 249
+ +V WNV+I + A+ + +M G EPD T VL AC L +L G
Sbjct: 126 NQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAG 185
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
+ VH +++ + + LIDMYAKCG V A +F + W++MI Q+
Sbjct: 186 REVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQN 245
Query: 310 GYAEEALELFSNMKNSSISPNYVTFL 335
G EAL L NM I+P VT +
Sbjct: 246 GRPAEALALCRNMAAEGIAPTIVTLV 271
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Query: 235 VVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM-EE 293
+L +C + G+ +H +L+ G L+ L T L+D+YA CG V AR LF M +
Sbjct: 68 TILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEMPNQ 127
Query: 294 INVWTWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCAC 341
NV+ W+ +I A+ G E A+EL+ M S+ P+ T+ VL AC
Sbjct: 128 GNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKAC 176
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 156/418 (37%), Positives = 228/418 (54%), Gaps = 4/418 (0%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN +I G A REA+ +F+ M+R G P T+ +L A + L +V ++ T
Sbjct: 593 WNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHAT 652
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
+GL D+ N LV Y C + A +VFDDM ER+V +W ++I ++ +A
Sbjct: 653 DAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFS 711
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
+F++M G PD TT + +LSAC G L K VH + G V + ++G AL+ MYA
Sbjct: 712 HFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYA 771
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KCG++ AR +F M E +V++W+ MI GLAQHG EAL+ F MK+ PN +++
Sbjct: 772 KCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVA 831
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
VL AC+HAG+V++G R F M +GI+P HY M D+L RAG L+EA FI+NMP +
Sbjct: 832 VLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIE 891
Query: 397 PNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVS 456
P+ ALL A + + R L+L+P+ + V+++N YA G WE+
Sbjct: 892 PDDAPWGALLGACVTYGNLEMAEFAAKER---LKLKPKSASTYVLLSNIYAATGKWEQKL 948
Query: 457 NVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
VR M+ G++K G SW+E+ IH F G S E IY L L +K +
Sbjct: 949 LVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKAKGY 1006
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 125/431 (29%), Positives = 206/431 (47%), Gaps = 23/431 (5%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+H I SG++ + + +L+R L AR + + ++ I W +I GYA
Sbjct: 139 QVHVCIIKSGMEQNLYVANKLLR--VYIRCGRLQCARQVFDKLLKKNIYI-WTTMIGGYA 195
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+A+ V+ M++ +P E TY +LKAC L G ++ A++ +SG SDV
Sbjct: 196 EYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVR 255
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
LV Y C DA +FD M ER+V+SW V+I EA F++M+ G
Sbjct: 256 VETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREG 315
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
F P+ T + +L+A G L K VH + G L+ ++G AL+ MYAK G++ AR
Sbjct: 316 FIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDAR 375
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
++F M E ++++W+ MI GLAQHG +EA LF M+ + PN T+L +L N +
Sbjct: 376 VVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSIL---NASA 432
Query: 346 MVEDGYRYFHEMEHVHG-----IKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPI 400
+ + ++ H H I +RI + + + A+ G + +A M
Sbjct: 433 IASTSALEWVKVVHKHAEEAGFISDLRIG-NALIHMYAKCGSIDDARLVFDGM------- 484
Query: 401 VLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG----SQNLVIVANKYAEVGMWEKVS 456
R ++S +++ Q+G G+E L+++ G S + + N + E V+
Sbjct: 485 CDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVN 544
Query: 457 NVRRFMKNVGL 467
V + GL
Sbjct: 545 EVHKHAVETGL 555
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 197/432 (45%), Gaps = 26/432 (6%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
++H+ +GL D ++ LV + S ++ AR + + W +I G A
Sbjct: 341 EVHSHAVNAGLALDLRVGNALVHM--YAKSGSIDDARVVFDGMTERDI-FSWTVMIGGLA 397
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACA--EISGLNEGMQVQANVTKSGLDSD 163
R +EA +F+ M+R G P TY +L A A S L V + ++G SD
Sbjct: 398 QHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISD 457
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
+ N L+ Y C DA VFD MC+R V+SWN ++ +N EA F++M+
Sbjct: 458 LRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQ 517
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G PD TT L +L+ L VH +E G + + ++G+A I MY +CG++
Sbjct: 518 EGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDD 577
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
ARLLF ++ +V TW+AMI G AQ EAL LF M+ P+ TF+ +L
Sbjct: 578 ARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILS---- 633
Query: 344 AGMVEDGYRYFHEMEHVH----GIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
A + E+ + E+ H H G+ +R+ + + ++ G++K A +M
Sbjct: 634 ANVDEEALEWVKEV-HSHATDAGLVDLRVG-NALVHTYSKCGNVKYAKQVFDDM------ 685
Query: 400 IVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG----SQNLVIVANKYAEVGMWEKV 455
V R + + + + Q G G++ L++ G + V + + A G E V
Sbjct: 686 -VERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWV 744
Query: 456 SNVRRFMKNVGL 467
V + GL
Sbjct: 745 KEVHNHAVSAGL 756
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 190/401 (47%), Gaps = 48/401 (11%)
Query: 58 NDAQILKELVRFCTLSSSKNLTYAR----SILCNYVND------SVPIPWNNLIRGYAWS 107
N+AQ+ + LV TL S + + ++R SI + ++ SV + N + G A
Sbjct: 34 NEAQVQRILVG-STLLSGRQMRHSRLYFLSISGCFKSEKHKYLPSVLVCANASVDGAAEQ 92
Query: 108 DR----PREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD 163
++AV + ++GI F+Y +L+ C + + QV + KSG++ +
Sbjct: 93 THNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQN 152
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
+Y N L+R Y C R + A +VFD + ++++ W +I E +A+ + KM+
Sbjct: 153 LYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQ 212
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
+P+E T L +L AC NL GK +H +I+ G + ++ TAL++MY KCG++
Sbjct: 213 ECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIED 272
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A+L+F +M E NV +W+ MI GLA +G +EA LF M+ PN T++ +L A
Sbjct: 273 AQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANAS 332
Query: 344 AGMVE-------------------DGYRYFHEMEHVHGIKPMRIHYHTMA--DI------ 376
AG +E G H I R+ + M DI
Sbjct: 333 AGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVM 392
Query: 377 ---LARAGHLKEAYTFIMNMPFQ---PNPIVLRALLSASSI 411
LA+ G +EA++ + M PN ++L+AS+I
Sbjct: 393 IGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAI 433
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 163/500 (32%), Positives = 258/500 (51%), Gaps = 41/500 (8%)
Query: 37 LCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP 96
L C KK +H + GL ++ + LV+ +L ++ AR + + V
Sbjct: 151 LACGKK----LHCHVVKFGLGSNLYVQNALVKMYSLCGLMDM--ARGVFDRRCKEDV-FS 203
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN +I GY E++ + ++M+R + PT T VL AC+++ + +V V+
Sbjct: 204 WNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVS 263
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE--NLWLG-- 212
+ + + N LV Y +C A ++F M R V+SW I+ VE NL L
Sbjct: 264 ECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLART 323
Query: 213 ---------------------------EAVGYFVKMKDLGFEPDETTMLVVLSACTELGN 245
E++ F +M+ G PDE TM+ VL+AC LG+
Sbjct: 324 YFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGS 383
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
L +G+W+ + + + +G ALIDMY KCG A+ +F M++ + +TW+AM++G
Sbjct: 384 LEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVG 443
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKP 365
LA +G +EA+++F M++ SI P+ +T+LGVL ACNH+GMV+ ++F +M H I+P
Sbjct: 444 LANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEP 503
Query: 366 MRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVR 425
+HY M D+L RAG +KEAY + MP PN IV ALL AS +H+ + +
Sbjct: 504 SLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHN---DEPMAELAA 560
Query: 426 RRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRF 485
+++LELEP ++ N YA W+ + VRR + +V +KK G S +E+ G H F
Sbjct: 561 KKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEF 620
Query: 486 YSGYDSQVELAGIYQILETL 505
+G S ++ IY LE L
Sbjct: 621 VAGDKSHLQSEEIYMKLEEL 640
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 167/351 (47%), Gaps = 33/351 (9%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+S L +C + Q+H+Q G+ + K+L F +++YA +
Sbjct: 38 ISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEP 97
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG-LNEGMQ 150
V + WNN+I+G++ D E V ++++M + G+ P T+PF+L G L G +
Sbjct: 98 DVVV-WNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKK 156
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+ +V K GL S++Y N LV+ Y C A VFD C+ V SWN++I+
Sbjct: 157 LHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKE 216
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
E++ V+M+ P T+L+VLSAC+++ + L K VH + E T + +L A
Sbjct: 217 YEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENA 276
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINV--WT-----------------------------W 299
L++ YA CG + A +F M+ +V WT W
Sbjct: 277 LVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISW 336
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
+ MI G + G E+LE+F M+++ + P+ T + VL AC H G +E G
Sbjct: 337 TIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG 387
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 129/286 (45%), Gaps = 9/286 (3%)
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT- 241
A K+F + E VV WN +I + GE V ++ M G PD T +L+
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
+ G L+ GK +H +++ G N + AL+ MY+ CG + AR +F R + +V++W+
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
MI G + EE++EL M+ + +SP VT L VL AC+ +D + HE
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVK-DKDLCKRVHEYVSEC 265
Query: 362 GIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVG 421
+P + + + A G + A +M R ++S +SI + G
Sbjct: 266 KTEPSLRLENALVNAYAACGEMDIAVRIFRSMK-------ARDVISWTSIVKGYVERGNL 318
Query: 422 NEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGL 467
R ++ R + I+ + Y G + + + R M++ G+
Sbjct: 319 KLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/461 (33%), Positives = 239/461 (51%), Gaps = 6/461 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIH+ +G ++D + L+ S L AR +L + + + W ++I GY
Sbjct: 366 QIHSLSVKTGFESDMYVSGVLIDM--YSKYGWLEKARRVL-EMLKEKDVVSWTSMIAGYV 422
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ ++A+ F +M++ GI P + CA I+ + +G+Q+ A + SG DV
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVS 482
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N LV Y C R R+A F++M + ++ N +++ ++ EA+ F++M G
Sbjct: 483 IWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSG 542
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+ + T + LSA L + GK +H ++I+ G ++G ALI +Y KCG+ A+
Sbjct: 543 VKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAK 602
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+ FS M E N +W+ +I +QHG EAL+LF MK I PN VTF+GVL AC+H G
Sbjct: 603 MEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVG 662
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+VE+G YF M +GI+P HY + DI RAG L A FI MP + +V R L
Sbjct: 663 LVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTL 722
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
LSA +H VG + LLELEP S + V+++N YA W VR+ M++
Sbjct: 723 LSACKVHK---NIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDR 779
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
G++K G SW+E+ +H F+ G IY L +N
Sbjct: 780 GVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVIN 820
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 188/415 (45%), Gaps = 15/415 (3%)
Query: 32 LSFLKLCCSKKHLYQ----IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
LS + C+K L+ IHAQ G ++ + ++ S L A + C+
Sbjct: 146 LSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRL--AERVFCD 203
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+ + +N LI G+A A+ +F +M+ G+ P T +L ACA + L +
Sbjct: 204 MPHRDT-VTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G Q+ + + K+G+ SD +L+ Y C A +F+ +VV WN+++ +
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
L ++ F +M+ G P++ T +L CT + LG+ +H ++ G + +
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYV 382
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
LIDMY+K G + AR + ++E +V +W++MI G QH ++AL F M+ I
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
P+ + + C + G + H +V G ++ + ++ AR G ++EA+
Sbjct: 443 WPDNIGLASAISGCAGINAMRQGLQ-IHARIYVSGYSGDVSIWNALVNLYARCGRIREAF 501
Query: 388 TFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIV 442
+ M + + I L+S + Q G+ E + + ++ G ++ V
Sbjct: 502 SSFEEMELK-DGITGNGLVSGFA------QSGLHEEALKVFMRMDQSGVKHNVFT 549
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 142/292 (48%), Gaps = 1/292 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W ++ GYA + EA+ ++ M R G+ PT + VL +C + +G + A
Sbjct: 109 VSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQ 168
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K G S+++ N ++ Y C R A +VF DM R V++N +I+ + A
Sbjct: 169 GYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHA 228
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M+ G PD T+ +L+AC LG+L G +H L + G + + +L+D+
Sbjct: 229 LEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDL 288
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y KCG V A ++F+ + NV W+ M++ Q ++ ELF M+ + I PN T+
Sbjct: 289 YVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTY 348
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+L C ++ G + H + G + + D+ ++ G L++A
Sbjct: 349 PCILRTCTCTREIDLGEQ-IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKA 399
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 154/345 (44%), Gaps = 32/345 (9%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFC-TLSSSKNLTYARSIL----------- 85
C +H +I ++Q SGL D + L+ C +L + T S L
Sbjct: 222 CGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIM 281
Query: 86 ----------CNYVNDSVPI----------PWNNLIRGYAWSDRPREAVWVFIDMKRRGI 125
C V ++ I WN ++ + + ++ +F M+ GI
Sbjct: 282 EGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGI 341
Query: 126 KPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACK 185
+P +FTYP +L+ C ++ G Q+ + K+G +SD+Y + L+ Y A +
Sbjct: 342 RPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARR 401
Query: 186 VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGN 245
V + + E+ VVSW +I V++ +A+ F +M+ G PD + +S C +
Sbjct: 402 VLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINA 461
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
+ G +H ++ G + + AL+++YA+CG + A F ME + T + ++ G
Sbjct: 462 MRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSG 521
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
AQ G EEAL++F M S + N TF+ L A + ++ G
Sbjct: 522 FAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQG 566
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 144/314 (45%), Gaps = 13/314 (4%)
Query: 101 IRGYAWSDRPREAVWVFIDMKRR--GIKPTEFTYPFVLKACAEISGLNEGMQV----QAN 154
+ G+ + P + + +F D R+ G+ P +F L+AC G QV A
Sbjct: 13 LAGFLAHEDPAKVLSLFADKARQHGGLGPLDFA--CALRAC---RGNGRRWQVVPEIHAK 67
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
GL N L+ Y A +VF+++ R VSW +++ +N EA
Sbjct: 68 AVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEA 127
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+G + +M G P + VLS+CT+ + G+ +H Q + G +G A+I +
Sbjct: 128 LGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITL 187
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y +CG+ A +F M + T++ +I G AQ G+ E ALE+F M+ S +SP+ VT
Sbjct: 188 YLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTI 247
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+L AC G ++ G + H GI I ++ D+ + G ++ A I N
Sbjct: 248 SSLLAACASLGDLQKGTQ-LHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV-IFNSS 305
Query: 395 FQPNPIVLRALLSA 408
+ N ++ +L A
Sbjct: 306 DRTNVVLWNLMLVA 319
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 169/480 (35%), Positives = 248/480 (51%), Gaps = 23/480 (4%)
Query: 48 HAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPWNNLIRG 103
H Q V G + D + L+ S L AR++ D +P + W ++I G
Sbjct: 2038 HQQAFVFGFETDLFVSSALIDM--YSKCGQLKDARALF-----DEIPLRNVVSWTSMITG 2090
Query: 104 YAWSDRPREAVWVFIDMKRRGIKPTEFT-YPF-------VLKACAEISGLNEGMQVQANV 155
Y +++ A+ +F D + + P VL AC+ +SG V V
Sbjct: 2091 YVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFV 2150
Query: 156 TKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
K G D + N L+ Y C + + KVFD M E+ +SWN +I V ++ GEA+
Sbjct: 2151 VKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEAL 2210
Query: 216 GYFVKM-KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
F M + +G + T+ VL AC G L GK +H Q+I+ N +GT++IDM
Sbjct: 2211 EVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDM 2270
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y KCG V A+ F RM+E NV +W+AM+ G HG A+EAL++F M + + PNY+TF
Sbjct: 2271 YCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITF 2330
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ VL AC+HAG+VE+G+ +F+ M+H + I+P HY M D+ RAG L EAY I M
Sbjct: 2331 VSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMK 2390
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
+P+ +V +LL A IH K D +G ++L EL+P V+++N YA+ G W
Sbjct: 2391 MKPDFVVWGSLLGACRIH--KNVD-LGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWAD 2447
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
V +R MKN L K G S VEL G +H F G IY+ LE L L ++ + +
Sbjct: 2448 VERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGY 2507
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 143/411 (34%), Positives = 218/411 (53%), Gaps = 36/411 (8%)
Query: 9 TNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVR 68
T+ +FP K +A++ L L+ C + KHL QIHA+I SGL ND + ++L+
Sbjct: 8 THDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIH 67
Query: 69 FCTLSSSKNLTYARSILCNY-VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKP 127
S+ + YA IL Y + + WN +IR + +A+ ++ +M +GI
Sbjct: 68 L--YSTHGRIAYA--ILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAA 123
Query: 128 TEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVF 187
+FT+PFV+KAC ++ G V ++ K G DV+ NNL+ FY C R A KVF
Sbjct: 124 DKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVF 183
Query: 188 DDMCERSVVSWNVIIT---VC----------------------------VENLWLGEAVG 216
+ M R+VVSW +I+ C + N EA+
Sbjct: 184 EKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALE 243
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F +M+ P+E TM+ ++ ACTE+G L+LG+ +H I+ + LGTALIDMY+
Sbjct: 244 LFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYS 303
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KCG++ A +F M ++ TW++MI L HG +EAL LFS M+ ++ P+ +TF+G
Sbjct: 304 KCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIG 363
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
VLCAC H V++G YF M +GI P+ HY M ++ AR+ +L EA+
Sbjct: 364 VLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAF 414
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 143/272 (52%), Gaps = 9/272 (3%)
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
YV+ S WN++I A EA+ F +++ G+ PT ++P +K+C+ + L
Sbjct: 1974 YVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVS 2033
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G G ++D++ ++ L+ Y C + +DA +FD++ R+VVSW +IT V+
Sbjct: 2034 GRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQ 2093
Query: 208 NLWLGEAVGYF-------VKMKDLGFEP-DETTMLVVLSACTELGNLSLGKWVHLQLIER 259
N A+ F +++D P D M+ VLSAC+ + + + VH ++++
Sbjct: 2094 NEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKK 2153
Query: 260 GTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELF 319
G + +G L+D YAKCG ++ +F MEE + +W++MI AQ G + EALE+F
Sbjct: 2154 GFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVF 2213
Query: 320 SNM-KNSSISPNYVTFLGVLCACNHAGMVEDG 350
M ++ + N VT VL AC HAG + G
Sbjct: 2214 HGMVRHVGVRYNAVTLSAVLLACAHAGALRAG 2245
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 141/330 (42%), Gaps = 42/330 (12%)
Query: 134 FVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER 193
F+L+ C L Q+ A + +SGL +D L+ Y + R A +F +
Sbjct: 32 FLLQNCKNFKHLR---QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNP 88
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
+WN+II N +A+ + M G D+ T V+ ACT ++ LGK VH
Sbjct: 89 CTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVH 148
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCG--------------------------AVGC---- 283
LI+ G + + LID Y KCG + C
Sbjct: 149 GSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQ 208
Query: 284 -ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
AR +F + NV +W+AMI G ++ EEALELF M+ +I PN T + ++ AC
Sbjct: 209 EARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACT 268
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVL 402
G++ G R H+ + I+ + D+ ++ G +K+A MP + P
Sbjct: 269 EMGILTLG-RGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLP-TW 326
Query: 403 RALLSASSIHDAKYQDGVGNEVRRRLLELE 432
+++++ +H G+G E E+E
Sbjct: 327 NSMITSLGVH------GLGQEALNLFSEME 350
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A + +++ NV +W+++I LA+ G + EAL FS+++ + P +F + +C+
Sbjct: 1968 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 2027
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
+ G R H+ V G + + D+ ++ G LK+A +P +
Sbjct: 2028 LCDLVSG-RMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR 2079
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 179/519 (34%), Positives = 257/519 (49%), Gaps = 30/519 (5%)
Query: 10 NHIFPPKPSNC-NSDLLSKARQCLSF-LKLC--------CSKKHLYQIHAQIQVSGLQND 59
+H FP +C S +A+Q + LKL S H+Y +++ + L D
Sbjct: 127 SHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFD 186
Query: 60 AQILKELVRFCTL----SSSKNLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPR 111
L++ V F L S ++ AR + D +P + WN +I GY S R
Sbjct: 187 KSTLRDAVSFTALITGYVSEGHVDDARRLF-----DEIPAKDVVSWNAMIAGYVQSGRFE 241
Query: 112 EAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLV 171
EA+ F M+ + P + T VL AC + L G + + V G ++ N LV
Sbjct: 242 EALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALV 301
Query: 172 RFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDET 231
Y C A K+FD M ++ V+ WN +I EA+ F M P++
Sbjct: 302 DMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDV 361
Query: 232 TMLVVLSACTELGNLSLGKWVHL----QLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
T L VL AC LG L LGKWVH L G V N L T++I MYAKCG V A +
Sbjct: 362 TFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQV 421
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMV 347
F M ++ +W+AMI GLA +G+AE AL LF M N P+ +TF+GVL AC AG V
Sbjct: 422 FRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFV 481
Query: 348 EDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLS 407
E G+RYF M +GI P HY M D+LAR+G EA + NM +P+ + +LL+
Sbjct: 482 ELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLN 541
Query: 408 ASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGL 467
A IH Q G V RL ELEP S V+++N YA G W+ V+ +R + + G+
Sbjct: 542 ACRIHG---QVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGM 598
Query: 468 KKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
KK+ G + +E+ G +H F G + I+++L+ ++
Sbjct: 599 KKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVD 637
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 181/352 (51%), Gaps = 34/352 (9%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
L+ L C L QIH+ I SGL N +L+ FC LS S++L+YA S+ + ++
Sbjct: 29 LNLLAKCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLF-HSIHH 87
Query: 92 SVP--IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
P WN LIR ++ + P ++ +F M G+ P T+P + K+CA+ +E
Sbjct: 88 QPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAK 147
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFY---GSCRRKR------------------------- 181
Q+ A+ K L + + +L+ Y G R R
Sbjct: 148 QLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEG 207
Query: 182 ---DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
DA ++FD++ + VVSWN +I V++ EA+ F +M++ P+++TM+ VLS
Sbjct: 208 HVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLS 267
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
AC L +L LGKW+ + +RG N QL AL+DMY+KCG +G AR LF ME+ +V
Sbjct: 268 ACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVIL 327
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
W+ MI G EEAL LF M +++PN VTFL VL AC G ++ G
Sbjct: 328 WNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLG 379
>gi|449487105|ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 173/526 (32%), Positives = 266/526 (50%), Gaps = 56/526 (10%)
Query: 26 SKARQ--CLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARS 83
S+ RQ S LK C S ++L +IHAQI VSG IL L+ S +L A+
Sbjct: 23 SRVRQQFIFSVLKSCVSFRNLAKIHAQIVVSGFSQKNYILNHLLSLYI--SFGSLGSAQK 80
Query: 84 ILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS 143
+ + S + WN +I+G+ S ++++ +F M G++ FTY F+L AC
Sbjct: 81 VFEDITAPSTTV-WNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSR 139
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGS--------CRRKR-------------- 181
EG Q+ V +G S++Y NL+ Y + +R R
Sbjct: 140 LFREGEQIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRARYLFDEMPDSNVVGW 199
Query: 182 --------------DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
A KVFD+M ER+V +W +++ +N A+ F +M+ G E
Sbjct: 200 NSLLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVE 259
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERG------TVLNCQLGTALIDMYAKCGAV 281
D+ ++ LSAC ELG+L+LGKW+H +ER VL L ALI MYA CG +
Sbjct: 260 LDQVALVAALSACAELGDLTLGKWIH-GYVERTWRSRHLPVL-VSLNNALIHMYASCGVM 317
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM---KNSSISPNYVTFLGVL 338
A +F + + N +WS++I G A+ G EA+ +F M + + P+ +TF+G L
Sbjct: 318 DLAYKVFEEIPQRNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGAL 377
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
AC+HAG++ DG R F M G+ P HY M D+L+RAG L EA + I +MP +PN
Sbjct: 378 TACSHAGLISDGIRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPN 437
Query: 399 PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP--RGSQNLVIVANKYAEVGMWEKVS 456
V ALLS +H K + V + + E+ P + + +++AN YA G W+ +
Sbjct: 438 NAVWGALLSGCRLH--KNDEIVSHVAKHLSFEIHPNNQAAGYFMLLANVYAADGRWQDTA 495
Query: 457 NVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQIL 502
VRR M ++G+KK G SW+E+ G + F G ++ ++ IY++L
Sbjct: 496 TVRRNMHDIGVKKPSGRSWIEINGVLCSFMVGEETHKDVNLIYEML 541
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 199 NVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
N I+ + EN A+G +++ + + VL +C NL+ +H Q++
Sbjct: 3 NRIVPILRENATAISAIGRSSRVR-------QQFIFSVLKSCVSFRNLAK---IHAQIVV 52
Query: 259 RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALEL 318
G + L+ +Y G++G A+ +F + + W+ +I G + +++++EL
Sbjct: 53 SGFSQKNYILNHLLSLYISFGSLGSAQKVFEDITAPSTTVWNQIIKGHTRSKTSKKSIEL 112
Query: 319 FSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
F M + + N T+ +L AC + R F E E +HG
Sbjct: 113 FKRMTLAGVEANGFTYSFLLSACVRS-------RLFREGEQIHG 149
>gi|242058523|ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
gi|241930382|gb|EES03527.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
Length = 695
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 160/446 (35%), Positives = 240/446 (53%), Gaps = 21/446 (4%)
Query: 73 SSSKNLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPT 128
S S ++ AR + DS+P WN++I YA REA+ +F M R G P
Sbjct: 251 SKSGDVEEARRLF-----DSMPRRTSASWNSMIACYAHGGEFREALTLFDQMLREGASPN 305
Query: 129 EFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD 188
T V CA+ L+ G + +A + + L +V + L+ Y CR +A FD
Sbjct: 306 AITITTVFSICAKTGDLDTGRRARAWIREEDLQ-NVIVHTALMEMYVKCRAIDEARHEFD 364
Query: 189 DMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSL 248
M R VV+W+ +I +N E++ F +MK +P+E T++ VLSAC +LG+ L
Sbjct: 365 RMPRRDVVAWSTMIAGYSQNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDEL 424
Query: 249 GKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ 308
G+ + + + L LG+ALIDMY KCG V AR +F+RME+ V TW++MI GLA
Sbjct: 425 GEQIGNYIESQTLPLTSYLGSALIDMYTKCGHVARARSVFNRMEQKVVVTWNSMIRGLAL 484
Query: 309 HGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRI 368
+G+AE+A+ L+ M I PN VTF+ +L AC HAG+V+ G +F EM+ + P
Sbjct: 485 NGFAEDAIALYRKMVGDGIQPNEVTFVALLTACTHAGLVDKGIAFFEEMKKKQHVSPQVE 544
Query: 369 HYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHD----AKYQDGVGNEV 424
H + D+L ++G L EAY FI +M +PN ++ LLSA H AK G
Sbjct: 545 HCACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAAG----- 599
Query: 425 RRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHR 484
+L+ LEP S V+++N YA+ G+W V +R M++ L+K+ SW+EL G +HR
Sbjct: 600 --KLVALEPNNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWIELDGEVHR 657
Query: 485 FYSGYDSQVELAGIYQILETLNLHMK 510
F A IY +++ L L ++
Sbjct: 658 FLVQDTYHPRSAEIYNVVDGLGLQLE 683
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 157/370 (42%), Gaps = 44/370 (11%)
Query: 60 AQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNL----IRGYAWSDRPREAVW 115
A++LK LS++ AR + D VP P L + G + +E +
Sbjct: 106 ARLLKTRPLHALLSNASTYRAARHLF-----DVVPRPTAALCCAFLSGLSKLSLHQEFIE 160
Query: 116 VFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYG 175
V + RRG P VLK+CA+ + +G Q + G+ DV+ LV FY
Sbjct: 161 VVSSLHRRGGAIPSGCIPLVLKSCAQSAASCQGSQTHCHALVRGMLGDVFVQTALVDFYA 220
Query: 176 S-------------------------------CRRKRDACKVFDDMCERSVVSWNVIITV 204
+A ++FD M R+ SWN +I
Sbjct: 221 KNGDMDSALMAFKEMPVKDPIPMNCLITGYSKSGDVEEARRLFDSMPRRTSASWNSMIAC 280
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
EA+ F +M G P+ T+ V S C + G+L G+ + E + N
Sbjct: 281 YAHGGEFREALTLFDQMLREGASPNAITITTVFSICAKTGDLDTGRRARAWIREE-DLQN 339
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+ TAL++MY KC A+ AR F RM +V WS MI G +Q+G E+LELF MK
Sbjct: 340 VIVHTALMEMYVKCRAIDEARHEFDRMPRRDVVAWSTMIAGYSQNGRPHESLELFERMKA 399
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT-MADILARAGHL 383
++ PN VT +GVL AC G E G + + +E P+ + + + D+ + GH+
Sbjct: 400 TNCKPNEVTLVGVLSACAQLGSDELGEQIGNYIE--SQTLPLTSYLGSALIDMYTKCGHV 457
Query: 384 KEAYTFIMNM 393
A + M
Sbjct: 458 ARARSVFNRM 467
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 163/500 (32%), Positives = 258/500 (51%), Gaps = 41/500 (8%)
Query: 37 LCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP 96
L C KK +H + GL ++ + LV+ +L ++ AR + + V
Sbjct: 151 LACGKK----LHCHVVKFGLGSNLYVQNALVKMYSLCGLMDM--ARGVFDRRCKEDV-FS 203
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN +I GY E++ + ++M+R + PT T VL AC+++ + +V V+
Sbjct: 204 WNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVS 263
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE--NLWLG-- 212
+ + + N LV Y +C A ++F M R V+SW I+ VE NL L
Sbjct: 264 ECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLART 323
Query: 213 ---------------------------EAVGYFVKMKDLGFEPDETTMLVVLSACTELGN 245
E++ F +M+ G PDE TM+ VL+AC LG+
Sbjct: 324 YFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGS 383
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
L +G+W+ + + + +G ALIDMY KCG A+ +F M++ + +TW+AM++G
Sbjct: 384 LEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVG 443
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKP 365
LA +G +EA+++F M++ SI P+ +T+LGVL ACNH+GMV+ ++F +M H I+P
Sbjct: 444 LANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEP 503
Query: 366 MRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVR 425
+HY M D+L RAG +KEAY + MP PN IV ALL AS +H+ + +
Sbjct: 504 SLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHN---DEPMAELAA 560
Query: 426 RRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRF 485
+++LELEP ++ N YA W+ + VRR + +V +KK G S +E+ G H F
Sbjct: 561 KKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEF 620
Query: 486 YSGYDSQVELAGIYQILETL 505
+G S ++ IY LE L
Sbjct: 621 VAGDKSHLQSEEIYMKLEEL 640
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 167/351 (47%), Gaps = 33/351 (9%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+S L +C + Q+H+Q G+ + K+L F +++YA +
Sbjct: 38 ISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEP 97
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG-LNEGMQ 150
V + WNN+I+G++ D E V ++++M + G+ P T+PF+L G L G +
Sbjct: 98 DVVV-WNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKK 156
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+ +V K GL S++Y N LV+ Y C A VFD C+ V SWN++I+
Sbjct: 157 LHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKE 216
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
E++ V+M+ P T+L+VLSAC+++ + L K VH + E T + +L A
Sbjct: 217 YEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENA 276
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINV--WT-----------------------------W 299
L++ YA CG + A +F M+ +V WT W
Sbjct: 277 LVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISW 336
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
+ MI G + G E+LE+F M+++ + P+ T + VL AC H G +E G
Sbjct: 337 TIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG 387
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 129/286 (45%), Gaps = 9/286 (3%)
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT- 241
A K+F + E VV WN +I + GE V ++ M G PD T +L+
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
+ G L+ GK +H +++ G N + AL+ MY+ CG + AR +F R + +V++W+
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
MI G + EE++EL M+ + +SP VT L VL AC+ +D + HE
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVK-DKDLCKRVHEYVSEC 265
Query: 362 GIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVG 421
+P + + + A G + A +M R ++S +SI + G
Sbjct: 266 KTEPSLRLENALVNAYAACGEMDIAVRIFRSMK-------ARDVISWTSIVKGYVERGNL 318
Query: 422 NEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGL 467
R ++ R + I+ + Y G + + + R M++ G+
Sbjct: 319 KLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364
>gi|449477795|ref|XP_004155125.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 159/462 (34%), Positives = 252/462 (54%), Gaps = 6/462 (1%)
Query: 25 LSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSI 84
+S + L+ L+ C S K L +IHA + VSGL + I +L+ FC +S S +L YA+ +
Sbjct: 1 MSNEKAILALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQ-L 59
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIK-PTEFTYPFVLKACAEIS 143
L + + WN++IRG+A S P +A+ + M P FT+ FVLKAC I
Sbjct: 60 LFHQMECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIK 119
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
+ +V +V + G D+DV NLV+ Y + A +VFD M R +V+WN +I+
Sbjct: 120 AERKCKEVHGSVIRCGYDADVIVCTNLVKCYSAMGLVCIARQVFDKMPARDLVAWNAMIS 179
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
+ EA+ + +M+ + D T++ ++S+C LG L++G +H E G
Sbjct: 180 CFSQQGLHQEALQTYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQ 239
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
+ +G ALIDMYAKCG++ A L+F RM+ +++TW++MI+G HG EA+ F M
Sbjct: 240 SLYVGNALIDMYAKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQML 299
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+ I PN VTFLG+LC C+H G+V++G +YF+ M +KP HY + D+ RAG L
Sbjct: 300 EARIQPNPVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKL 359
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
+A + N + ++ R LL + IH +G RL EL + + +++A
Sbjct: 360 DKALEIVSNSS-HNDSVLWRILLGSCKIHK---NVTIGEIAMNRLSELGATSAGDCILLA 415
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRF 485
YA V+ +R+ +K+ G K G SW+E+G +H+F
Sbjct: 416 TIYAGEKDKAGVARMRKMIKSQGKKTTPGWSWIEIGEQVHKF 457
>gi|297823227|ref|XP_002879496.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325335|gb|EFH55755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 617
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 160/467 (34%), Positives = 248/467 (53%), Gaps = 22/467 (4%)
Query: 33 SFLKLCCSKKHLY----QIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSIL 85
+F+ + C K+ +H+ + GL+ D I L+ C L + YAR +
Sbjct: 133 NFVFIACGKREEIGVGRSVHSSLFKVGLERDDHISHSLIMMYAKCGL-----VGYARKVF 187
Query: 86 CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL 145
+ + D V + WN++I GY+ + R ++A+ +F M+ G +P E T +L ACA + L
Sbjct: 188 -DEITDRVTVSWNSMISGYSEAGRAKDAMDLFRKMEEEGFEPDERTLVSMLGACAHLGDL 246
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
G ++ + + + L+ YG C A +VF+ M ++ V+WN +ITV
Sbjct: 247 TTGRLLEKMAITKKIGLSTFLGSKLITMYGKCGDLDSARRVFNQMIKKDRVAWNAMITVY 306
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
+N EA F +M+ G PD T+ VLSAC +G L LGK + E N
Sbjct: 307 SQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKRIETHASEISLQHNI 366
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
+ T L+DMY KCG + A +F M N TW+AMI A G+A+EAL LF M
Sbjct: 367 YVATGLVDMYGKCGHIEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDQM--- 423
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
+ P+ VTF+GVL AC HAG+V+ G RYFHEM + G+ P HY + D+L+RAG L E
Sbjct: 424 PVPPSDVTFIGVLSACVHAGLVDQGCRYFHEMSSLFGLVPKIEHYTNIIDLLSRAGLLDE 483
Query: 386 AYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD-GVGNEVRRRLLEL-EPRGSQNLVIVA 443
A+ F+ P +P+ I+L A+L A K +D + + R L+E+ E + + N VI +
Sbjct: 484 AWEFMERFPGKPDEIMLAAILGACH----KRKDVAIREKAMRMLMEMKEAKNAGNYVISS 539
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYD 490
A++ MW++ + +R M++ G+ K G SW+E+ G + F +G D
Sbjct: 540 KVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEINGELMEFLAGSD 586
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 198/385 (51%), Gaps = 18/385 (4%)
Query: 29 RQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
R L LK C S L +I AQ+ + ++ ++ + V + YA S L +
Sbjct: 35 RGFLFLLKKCISVNQLREIQAQMLLHSVEKPNFLIPKAVEL------GDFNYA-SFLLSV 87
Query: 89 VNDSVPIPWNNLIRGYA--WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
+ +N +IRG W+D A+ ++ MK G+KP FTY FV AC + +
Sbjct: 88 TEEPNHYSFNYMIRGLTNIWNDH-EGALSLYRRMKYSGLKPDNFTYNFVFIACGKREEIG 146
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G V +++ K GL+ D + +++L+ Y C A KVFD++ +R VSWN +I+
Sbjct: 147 VGRSVHSSLFKVGLERDDHISHSLIMMYAKCGLVGYARKVFDEITDRVTVSWNSMISGYS 206
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
E +A+ F KM++ GFEPDE T++ +L AC LG+L+ G+ + I + L+
Sbjct: 207 EAGRAKDAMDLFRKMEEEGFEPDERTLVSMLGACAHLGDLTTGRLLEKMAITKKIGLSTF 266
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
LG+ LI MY KCG + AR +F++M + + W+AMI +Q+G + EA +LF M+ +
Sbjct: 267 LGSKLITMYGKCGDLDSARRVFNQMIKKDRVAWNAMITVYSQNGKSSEAFKLFFEMEKTG 326
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYR---YFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+SP+ T VL AC G +E G R + E+ H I + D+ + GH+
Sbjct: 327 VSPDAGTLSTVLSACGSVGALELGKRIETHASEISLQHNIYVAT----GLVDMYGKCGHI 382
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSA 408
+EA MP + N A+++A
Sbjct: 383 EEALRVFEAMPVK-NEATWNAMITA 406
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 154/426 (36%), Positives = 223/426 (52%), Gaps = 34/426 (7%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M +G+KP +FT V+KACA I+ L +G Q + K G +SDV LV Y C
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENL-------------------WLGEAVGY--- 217
DA VFD M ERS +WN +IT +N W GY
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 218 ---------FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
F +M+ G + D M VLSAC +L L LG+ H +++ G L+ +G
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
+AL+DMYAK G++ A +F +M + N +W+++I G AQHG +A+ LF M + I
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIK 240
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
PN ++F+GVL AC+H G+V +G YF+ M +GI P HY M D+L RAG L EA
Sbjct: 241 PNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAEN 300
Query: 389 FIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAE 448
FI MP +P+ V ALL A IH + + LL +E + + V+++N YA
Sbjct: 301 FINGMPVEPDVSVWGALLGACRIHG---NTELAKRIAEHLLGMEVQIAGIYVLLSNIYAA 357
Query: 449 VGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLH 508
G W+ + VR+ MK+ G+ K G SW+E+ +H F +G S +L I++ LE+L+
Sbjct: 358 AGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRK 417
Query: 509 MKVLNF 514
MK +
Sbjct: 418 MKAAGY 423
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 115/223 (51%), Gaps = 2/223 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +I GYA + E++ VF M++ G+K F VL ACA+++ L G Q A
Sbjct: 108 VSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAY 167
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V +SG D+ + LV Y DAC+VFD M +R+ VSWN IIT C ++ +A
Sbjct: 168 VVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDA 227
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK-WVHLQLIERGTVLNCQLGTALID 273
V F +M G +P+E + + VLSAC+ G ++ G+ + +L G V + T +ID
Sbjct: 228 VLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMID 287
Query: 274 MYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEA 315
+ + G + A + M E +V W A++ HG E A
Sbjct: 288 LLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELA 330
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 232/416 (55%), Gaps = 4/416 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I G+A +E+ F M+ G+ P + T +L AC+E LN G+QV +
Sbjct: 368 VAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSY 427
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS-VVSWNVIITVCVENLWLGE 213
+ K G + D+ N+L+ Y C DA +VF+D+ ++ +VSWN ++T C++ GE
Sbjct: 428 IVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGE 487
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
+ M +PD T+ VL + ++ + +G +H +++ G L+ + ALI+
Sbjct: 488 VLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALIN 547
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MY KCG++ CAR +F + ++ +WS++I+G AQ G +EA ELF M+ + PN +T
Sbjct: 548 MYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEIT 607
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
F+G+L AC+H GMVE+G + + M+ + I P + H M D+LARAG L A FI M
Sbjct: 608 FVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQM 667
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
PF P+ +V + LL+A +H VG +L+++P S +V++ N +A G W+
Sbjct: 668 PFVPDVVVWKTLLAACKVHG---NLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWK 724
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
+ +R M+ + + K+ G SW+E+ +H F + + E IY +LE L L +
Sbjct: 725 DFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELMLQI 780
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 139/267 (52%), Gaps = 5/267 (1%)
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
DS+P + W ++I GY+ A+ +++ M R G P FT+ ++K+C+ +
Sbjct: 157 DSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFK 216
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
Q+ A+V KS +D+ N L+ Y + DA VF + + ++SW +I
Sbjct: 217 LARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFS 276
Query: 207 ENLWLGEAVGYFVKMKDLG-FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
+ + EA+ +F +M ++P+E SAC++L G+ +H I+ G +
Sbjct: 277 QLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDL 336
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
G +L DMYAKCG + AR +F +E+ ++ W+A+I G A A+E+ FS M+++
Sbjct: 337 FAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHT 396
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYR 352
+ PN VT L +LCAC+ M+ G +
Sbjct: 397 GLVPNDVTVLSLLCACSEPVMLNHGIQ 423
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 122/276 (44%), Gaps = 10/276 (3%)
Query: 43 HLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIR 102
H Q+H+ I G D + L+ S NL A + + N + + WN L+
Sbjct: 420 HGIQVHSYIVKMGFNLDIPVCNSLLSM--YSKCSNLNDALQVFEDIGNKADIVSWNTLLT 477
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
++ E + + M IKP T VL + +I+ G Q+ + KSGL+
Sbjct: 478 ACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNL 537
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
D+ +N L+ Y C A K+FD + ++SW+ +I + EA F M+
Sbjct: 538 DISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMR 597
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE----RGTVLNCQLGTALIDMYAKC 278
LG +P+E T + +L+AC+ +G + G ++ + E T +C + ++D+ A+
Sbjct: 598 GLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHC---SCMVDLLARA 654
Query: 279 GAVGCARLLFSRMEEI-NVWTWSAMILGLAQHGYAE 313
G + A +M + +V W ++ HG E
Sbjct: 655 GCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLE 690
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/416 (34%), Positives = 226/416 (54%), Gaps = 3/416 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +I GY + E +F+ M + P + T ++ +C + + G ++ A
Sbjct: 198 VSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAY 257
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ ++G + LV YG C R A +FD M + V++W +I+ + + A
Sbjct: 258 ILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYA 317
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
FV+M+D G P+E TM+ +LS C G L +GKW H + ++G ++ L TALIDM
Sbjct: 318 FQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDM 377
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG + A+ LFS + ++ TW+ M+ G HGY E+AL+LF+ M+ + PN +TF
Sbjct: 378 YAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITF 437
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+G L AC+HAG+V +G F +M H G+ P HY M D+L RAG L EAY I +MP
Sbjct: 438 IGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMP 497
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
PN + A+L+A IH +G R LL LEP+ V+++N YA W
Sbjct: 498 VTPNIAIWGAMLAACKIHK---NSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWND 554
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
V+ +R+ +K+ G+KK GMS +E+ G +H F G + + I ++L ++ +K
Sbjct: 555 VAGMRKAVKDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLK 610
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 151/303 (49%), Gaps = 23/303 (7%)
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ PR A+ + M++ I+ F P VLKAC++IS G ++ K+GL SDV+
Sbjct: 86 FESHPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVF 145
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL----------WLGEAV 215
N L++ Y C A +FD M ER VVSW+ +I + W
Sbjct: 146 VVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIA 205
Query: 216 GY------------FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
GY FV+M + P++ TML ++ +C +G + LGK +H ++ G +
Sbjct: 206 GYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGM 265
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
+ L TAL+DMY KCG + AR +F M+ +V TW+AMI AQ + A +LF M+
Sbjct: 266 SLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMR 325
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
++ + PN +T + +L C G ++ G ++FH G++ I + D+ A+ G +
Sbjct: 326 DNGVRPNELTMVSLLSLCAVNGALDMG-KWFHAYIDKQGVEVDVILKTALIDMYAKCGDI 384
Query: 384 KEA 386
A
Sbjct: 385 SGA 387
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 168/473 (35%), Positives = 243/473 (51%), Gaps = 46/473 (9%)
Query: 77 NLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
+L AR I D +P I W+ +I Y+ S EA+ +F M + G KP +
Sbjct: 265 DLREARRIF-----DEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCF 319
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
L A A + L+ G+ + +VTK G+D DV+ ++L+ Y C + D VFD + E
Sbjct: 320 ACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILE 379
Query: 193 RSVVSWN-------------------------------VIITVCVENLWLGEAVGYFVKM 221
++VV WN II +EN + + F +
Sbjct: 380 KNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTL 439
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
G P+++T VL AC + +L G VH ++I+ G + +GTAL DMYAKCG +
Sbjct: 440 LVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDI 499
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCA 340
G ++ +F RM E N +W+ MI GLA+ G+A E+L LF M + S ++PN + L VL A
Sbjct: 500 GSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFA 559
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPI 400
C+H G+V+ G YF+ ME V+GIKP HY + D+L+R+G L EA FI +PFQP
Sbjct: 560 CSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEAN 619
Query: 401 VLRALLSASSIHDAKYQD-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVR 459
ALLS KY+D + ++L +L S V+++N YA G W VSN+R
Sbjct: 620 AWAALLSGCK----KYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIR 675
Query: 460 RFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVL 512
+ M+ GLKK G SWVE+ +H FYS S + IY L+ L M VL
Sbjct: 676 KLMREKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLLRSEMLVL 728
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 159/368 (43%), Gaps = 75/368 (20%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W I G+ + EA+ +F + G++P + T+ V++AC E+ GM +
Sbjct: 150 VSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGL 209
Query: 155 VTKSGLDSDVYTNNNLV-------------RFYGSCRRK------------------RDA 183
V K+G + + +N+L+ R + ++ R+A
Sbjct: 210 VVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREA 269
Query: 184 CKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
++FD+M ER+ +SW+ +I ++ + EA+ F KM GF+P+ + LSA L
Sbjct: 270 RRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASL 329
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
LS G +H + + G + +G++LID+Y KCG RL+F + E NV W++M+
Sbjct: 330 RALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMV 389
Query: 304 LGLAQHGYA-------------------------------EEALELFSNMKNSSISPNYV 332
G + +G E+ LE+F+ + S +PN
Sbjct: 390 GGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKS 449
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHG-IKPMRIHYH-----TMADILARAGHLKEA 386
TF VLCAC ++ G +VHG I + I Y + D+ A+ G + +
Sbjct: 450 TFSSVLCACASIASLDKGM-------NVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSS 502
Query: 387 YTFIMNMP 394
MP
Sbjct: 503 KQVFERMP 510
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 33/251 (13%)
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
++VVSW I+ V N EA+ F ++ + G P++ T V+ AC ELG+ LG +
Sbjct: 147 QNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSI 206
Query: 253 HLQLIERG-----------TVLNCQLG--------------------TALIDMYAKCGAV 281
+++ G L+ ++G TA++D Y + G +
Sbjct: 207 LGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDL 266
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
AR +F M E N +WSAMI +Q GYAEEAL+LFS M PN F L A
Sbjct: 267 REARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSAL 326
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIV 401
+ G + + GI ++ D+ + G + + ++ + N +
Sbjct: 327 ASLRALSAGINIHGHVTKI-GIDKDVFIGSSLIDLYCKCGKPDDG-RLVFDLILEKNVVC 384
Query: 402 LRALLSASSIH 412
+++ SI+
Sbjct: 385 WNSMVGGYSIN 395
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 130/335 (38%), Gaps = 66/335 (19%)
Query: 146 NEGMQVQANV-----TKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
N+G+ Q NV K+G S Y L+ Y +CR+
Sbjct: 33 NQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRK--------------------- 71
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLV---VLSACTELGNLSLGKWVHLQLI 257
F ++ + E D + ++V ++SA + GNL + + ++
Sbjct: 72 -----------------FAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMP 114
Query: 258 ERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALE 317
ER V +ALI K G V + F R NV +W+A I G ++G EAL+
Sbjct: 115 ERNEVS----WSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALK 170
Query: 318 LFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL 377
LF + S + PN VTF V+ AC G G + +K HY ++++ L
Sbjct: 171 LFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLV-----VKAGFEHYLSVSNSL 225
Query: 378 A----RAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP 433
R G + A M R ++S ++I DA + G E RR E+
Sbjct: 226 ITLSLRMGEIDLARRVFDRME-------KRDVVSWTAILDAYVETGDLREARRIFDEMPE 278
Query: 434 RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLK 468
R + + +Y++ G E+ + M G K
Sbjct: 279 RNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFK 313
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 164/501 (32%), Positives = 254/501 (50%), Gaps = 39/501 (7%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+H + GLQ + + LV+ L L AR + + + I WN +I Y
Sbjct: 139 QLHGHVLKHGLQYNVFVHTALVQMYLLCGQ--LDTARGVF-DVCPKADVITWNMIISAYN 195
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ E+ +F+ M+ + + PT T VL AC+++ L G +V + V ++S++
Sbjct: 196 KVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLV 255
Query: 166 TNNNLVRFYGSCRRKRDACKVF-------------------------------DDMCERS 194
N ++ Y C A +F D M E+
Sbjct: 256 LENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKD 315
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHL 254
VSW +I + + EA+ F M+ +PDE TM+ VL+AC LG L LG+W+
Sbjct: 316 YVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIR- 374
Query: 255 QLIERGTVLN-CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
I+R + N + ALIDMY KCG V A +F M + + +TW+AMI+GLA +G+ E
Sbjct: 375 TYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGE 434
Query: 314 EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
+AL++FSNM +SI P+ +T++GVL AC H G+V+ G +YF M HGI+P HY +
Sbjct: 435 KALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCL 494
Query: 374 ADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP 433
D+LARAG LKEAY I NMP + N IV ALL+ ++ + + V +++LELEP
Sbjct: 495 VDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVY---RESDMAEMVVKQILELEP 551
Query: 434 RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQV 493
V++ N YA W + +R+ M + G+KK G S +E+ G +H F +G S
Sbjct: 552 DNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHP 611
Query: 494 ELAGIYQILETLNLHMKVLNF 514
+ I L+ + +K+ +
Sbjct: 612 QTKNIDAKLDKMTQDLKLAGY 632
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/354 (31%), Positives = 172/354 (48%), Gaps = 40/354 (11%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+S L+ C S L Q+H Q GL + + ++ FC + YAR + D
Sbjct: 22 ISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLF-----D 76
Query: 92 SVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+P P WN +IRGY+ D P+ V ++++M RRG+KP +T+PF+ K L
Sbjct: 77 EIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEY 136
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G Q+ +V K GL +V+ + LV+ Y C + A VFD + V++WN+II+ +
Sbjct: 137 GRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNK 196
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
E+ F+ M+D P T+++VLSAC++L +L GK VH + N L
Sbjct: 197 VGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVL 256
Query: 268 GTALIDMYAKC-------------------------------GAVGCARLLFSRMEEINV 296
A+IDMYA C G + AR F +M E +
Sbjct: 257 ENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDY 316
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
+W+AMI G + +EALELF NM+ +++ P+ T + VL AC H G +E G
Sbjct: 317 VSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELG 370
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 232/416 (55%), Gaps = 4/416 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I G+A +E+ F M+ G+ P + T +L AC+E LN G+QV +
Sbjct: 368 VAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSY 427
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS-VVSWNVIITVCVENLWLGE 213
+ K G + D+ N+L+ Y C DA +VF+D+ ++ +VSWN ++T C++ GE
Sbjct: 428 IVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGE 487
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
+ M +PD T+ VL + ++ + +G +H +++ G L+ + ALI+
Sbjct: 488 VLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALIN 547
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MY KCG++ CAR +F + ++ +WS++I+G AQ G +EA ELF M+ + PN +T
Sbjct: 548 MYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEIT 607
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
F+G+L AC+H GMVE+G + + M+ + I P + H M D+LARAG L A FI M
Sbjct: 608 FVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQM 667
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
PF P+ +V + LL+A +H VG +L+++P S +V++ N +A G W+
Sbjct: 668 PFVPDVVVWKTLLAACKVHG---NLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWK 724
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
+ +R M+ + + K+ G SW+E+ +H F + + E IY +LE L L +
Sbjct: 725 DFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELMLQI 780
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 139/267 (52%), Gaps = 5/267 (1%)
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
DS+P + W ++I GY+ A+ +++ M R G P FT+ ++K+C+ +
Sbjct: 157 DSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFK 216
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
Q+ A+V KS +D+ N L+ Y + DA VF + + ++SW +I
Sbjct: 217 LARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFS 276
Query: 207 ENLWLGEAVGYFVKMKDLG-FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
+ + EA+ +F +M ++P+E SAC++L G+ +H I+ G +
Sbjct: 277 QLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDL 336
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
G +L DMYAKCG + AR +F +E+ ++ W+A+I G A A+E+ FS M+++
Sbjct: 337 FAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHT 396
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYR 352
+ PN VT L +LCAC+ M+ G +
Sbjct: 397 GLVPNDVTVLSLLCACSEPVMLNHGIQ 423
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 122/276 (44%), Gaps = 10/276 (3%)
Query: 43 HLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIR 102
H Q+H+ I G D + L+ S NL A + + N + + WN L+
Sbjct: 420 HGIQVHSYIVKMGFNLDIPVCNSLLSM--YSKCSNLNDALQVFEDIGNKADIVSWNTLLT 477
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
++ E + + M IKP T VL + +I+ G Q+ + KSGL+
Sbjct: 478 ACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNL 537
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
D+ +N L+ Y C A K+FD + ++SW+ +I + EA F M+
Sbjct: 538 DISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMR 597
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE----RGTVLNCQLGTALIDMYAKC 278
LG +P+E T + +L+AC+ +G + G ++ + E T +C + ++D+ A+
Sbjct: 598 GLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHC---SCMVDLLARA 654
Query: 279 GAVGCARLLFSRMEEI-NVWTWSAMILGLAQHGYAE 313
G + A +M + +V W ++ HG E
Sbjct: 655 GCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLE 690
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/489 (33%), Positives = 259/489 (52%), Gaps = 14/489 (2%)
Query: 32 LSFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSIL-C 86
+S L C + L+ ++HA +GL + ++ +C + + AR++ C
Sbjct: 123 VSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGA---VEAARAVFDC 179
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
V +SV WN +I GYA + EA+ +F M + G+ T+ + L+AC E+ L+
Sbjct: 180 MPVRNSVS--WNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLD 237
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC-ERSVVSWNVIITVC 205
E +V + + GL S+V N L+ Y C+R A +VF+++ +++ +SWN +I
Sbjct: 238 EVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGF 297
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
+N +A F +M+ PD T++ V+ A ++ + +W+H I +
Sbjct: 298 TQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDV 357
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
+ TALIDMY+KCG V AR LF + +V TW+AMI G HG+ + A+ELF MK +
Sbjct: 358 YVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGT 417
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
PN TFL VL AC+HAG+V++G +YF M+ +G++P HY TM D+L RAG L E
Sbjct: 418 GSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDE 477
Query: 386 AYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANK 445
A++FI NMP +P V A+L A +H + E + + EL P V++AN
Sbjct: 478 AWSFIKNMPIEPGISVYGAMLGACKLHK---NVELAEESAQIIFELGPEEGVYHVLLANI 534
Query: 446 YAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
YA MW+ V+ VR M+ GL+K G S ++L +H FYSG + IY L L
Sbjct: 535 YANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKL 594
Query: 506 NLHMKVLNF 514
+K + +
Sbjct: 595 IEEIKDMGY 603
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 152/324 (46%), Gaps = 21/324 (6%)
Query: 29 RQCLSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYA--RS 83
R + LKLC ++ L +HAQ++ GL +++ L N+ + R
Sbjct: 17 RTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALA---------NMYFKCRRP 67
Query: 84 ILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRR--GIKPTEFTYPFVLK 137
V D +P + WN ++ GYA + P A+ + M+ G +P T VL
Sbjct: 68 ADARRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLP 127
Query: 138 ACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS 197
ACA+ L+ +V A ++GLD V + ++ Y C A VFD M R+ VS
Sbjct: 128 ACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVS 187
Query: 198 WNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLI 257
WN +I +N EA+ F +M G + + ++L L AC ELG L + VH L+
Sbjct: 188 WNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLV 247
Query: 258 ERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM-EEINVWTWSAMILGLAQHGYAEEAL 316
G N + ALI YAKC A +F+ + + +W+AMILG Q+ E+A
Sbjct: 248 RVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAE 307
Query: 317 ELFSNMKNSSISPNYVTFLGVLCA 340
LF+ M+ ++ P+ T + V+ A
Sbjct: 308 RLFARMQLENVRPDSFTLVSVIPA 331
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 111/233 (47%), Gaps = 3/233 (1%)
Query: 127 PTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKV 186
P T+ +LK CA + L G V A + GL S+ + L Y CRR DA +V
Sbjct: 14 PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73
Query: 187 FDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK--DLGFEPDETTMLVVLSACTELG 244
FD M R V+WN ++ N A+ V+M+ + G PD T++ VL AC +
Sbjct: 74 FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADAR 133
Query: 245 NLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMIL 304
L + VH + G + TA++D Y KCGAV AR +F M N +W+AMI
Sbjct: 134 ALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMID 193
Query: 305 GLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM 357
G A +G A EA+ LF M + + L L AC G + D R HE+
Sbjct: 194 GYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYL-DEVRRVHEL 245
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 167/496 (33%), Positives = 260/496 (52%), Gaps = 9/496 (1%)
Query: 24 LLSKARQCLSFLKLCCSKKHLYQ---IHAQIQVSGL-QNDAQILKELVRFCTLSSSKNLT 79
L A +S L L L+Q +HA + L QN+ Q+L + K+L
Sbjct: 197 LRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLV 256
Query: 80 YARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFT-YPFVLKA 138
YA + + + + W+ LI G+ DR EA +F DM G+ T L+
Sbjct: 257 YACRVF-HGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRV 315
Query: 139 CAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSW 198
CA ++ L G Q+ A + KSG+ +D+ N+L+ Y +A +FD++ + +S+
Sbjct: 316 CASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISY 375
Query: 199 NVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
+++ V+N EA F KM+ +PD TM+ ++ AC+ L L G+ H +I
Sbjct: 376 GALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVII 435
Query: 259 RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALEL 318
RG L + +LIDMYAKCG + +R +F +M ++ +W+ MI G HG +EA L
Sbjct: 436 RGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTL 495
Query: 319 FSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILA 378
F +MKN P+ VTF+ ++ AC+H+G+V +G +F M H +GI P HY M D+LA
Sbjct: 496 FLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLA 555
Query: 379 RAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQN 438
R G L EAY FI +MP + + V ALL A IH K D +G +V R + +L P G+ N
Sbjct: 556 RGGFLDEAYQFIQSMPLKADVRVWGALLGACRIH--KNID-LGKQVSRMIQKLGPEGTGN 612
Query: 439 LVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGI 498
V+++N ++ G +++ + VR K G KK G SW+E+ GS+H F G S I
Sbjct: 613 FVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDI 672
Query: 499 YQILETLNLHMKVLNF 514
Y L+ + + +K L +
Sbjct: 673 YHELDNILIDIKKLGY 688
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 121/246 (49%), Gaps = 8/246 (3%)
Query: 85 LCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACA 140
L V D +P P +N LIR Y+W A+ ++ M + P ++T+PFVLKAC+
Sbjct: 51 LARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACS 110
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
++ L G + A+ GL +D++ + L+ Y C R A VF M R VV+WN
Sbjct: 111 ALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNA 170
Query: 201 IITVCVENLWLGEAVGYFVKMKDL-GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER 259
++ + A+ + + M+D G P+ +T++ +L + G L G VH +
Sbjct: 171 MLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRA 230
Query: 260 GTVLNCQ---LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
N + +GTAL+DMYAKC + A +F M N TWSA+I G EA
Sbjct: 231 YLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAF 290
Query: 317 ELFSNM 322
LF +M
Sbjct: 291 NLFKDM 296
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 1/157 (0%)
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
A +VFD + ++N +I A+ + M P++ T VL AC+
Sbjct: 52 ARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSA 111
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
L +L G+ +H G + + TALID+Y +C G A +F++M +V W+AM
Sbjct: 112 LADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAM 171
Query: 303 ILGLAQHGYAEEALELFSNMKN-SSISPNYVTFLGVL 338
+ G A HG A+ +M++ + PN T + +L
Sbjct: 172 LAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLL 208
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 8/157 (5%)
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
G + AR +F R+ + ++A+I + G A++L+ +M + PN TF VL
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
AC+ + G R H G+ + D+ R A MP + +
Sbjct: 107 KACSALADLCAG-RTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMR-D 164
Query: 399 PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
+ A+L+ + H G+ + LL+++ RG
Sbjct: 165 VVAWNAMLAGYANH------GMYHHAIAHLLDMQDRG 195
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 168/517 (32%), Positives = 256/517 (49%), Gaps = 32/517 (6%)
Query: 13 FPPKPSNCNS----------DLLSKARQCLSFLKLCCSKKHLY---QIHAQIQVSGLQND 59
FP P++ +L R S + C K+L IHA + S L D
Sbjct: 35 FPSSPASSTGLRELDLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGD 94
Query: 60 AQILKELVR-FCTLSSSKNLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAV 114
A +L L+ +C + + +V D +P + W LI GYA + P EA+
Sbjct: 95 AFLLNSLIHMYCKCGAVSD--------ARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAI 146
Query: 115 WVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFY 174
+ DM R +P FT+ +LKA G + G Q+ A K D DVY + L+ Y
Sbjct: 147 GLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMY 206
Query: 175 GSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTML 234
C + A VFD + ++ VSWN +I + F +M+ GF T
Sbjct: 207 ARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYS 266
Query: 235 VVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI 294
+ SA +G L G+WVH LI+ G L +G ++ MYAK G++ AR +F RM++
Sbjct: 267 SMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKR 326
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYF 354
++ TW+ M+ LAQ+G +EA+ F ++ I N +TFL VL AC+H G+V++G YF
Sbjct: 327 DLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYF 386
Query: 355 HEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH-D 413
+M + ++P HY + D+L RAG LKEA F+ MP +P V ALL A +H +
Sbjct: 387 -DMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKN 445
Query: 414 AKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGM 473
AK +G + EL+P + V++ N YA G W + VR+ MK G+KK
Sbjct: 446 AK----MGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPAC 501
Query: 474 SWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
SWV++ S+H F + D+ + IY++ E +N+ +K
Sbjct: 502 SWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIK 538
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 234/419 (55%), Gaps = 12/419 (2%)
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P I W +I Y+ ++A+ + + M R ++P +TY VL++C +G++
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSC---NGMS 176
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
+ + + K GL+SDV+ + L+ + DA VFD+M + WN II
Sbjct: 177 DVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+N A+ F +MK GF ++ T+ VL ACT L L LG H+ +++ L
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDL--I 294
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
L AL+DMY KCG++ A +F++M+E +V TWS MI GLAQ+GY++EAL+LF MK+S
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSG 354
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
PNY+T +GVL AC+HAG++EDG+ YF M+ ++GI P+R HY M D+L +AG L +A
Sbjct: 355 TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDA 414
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKY 446
+ M +P+ + R LL A + + ++++ L+P + +++N Y
Sbjct: 415 VKLLNEMECEPDAVTWRTLLGACRVQRNMV---LAEYAAKKVIALDPEDAGTYTLLSNIY 471
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
A W+ V +R M++ G+KK G SW+E+ IH F G +S ++ + + L L
Sbjct: 472 ANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQL 530
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 161/357 (45%), Gaps = 18/357 (5%)
Query: 83 SILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI 142
++ C+Y + + + R D PR A+ ++ G+ TY ++K C
Sbjct: 16 TLRCSYSSTDQTLLLSEFTRLCYQRDLPR-AMKAMDSLQSHGLWADSATYSELIKCCISN 74
Query: 143 SGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII 202
++EG + ++ +G ++ N L+ Y DA ++FD M +R+V+SW +I
Sbjct: 75 RAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMI 134
Query: 203 TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV 262
+ + +A+ V M P+ T VL +C + ++ + +H +I+ G
Sbjct: 135 SAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLE 191
Query: 263 LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM 322
+ + +ALID++AK G A +F M + W+++I G AQ+ ++ ALELF M
Sbjct: 192 SDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRM 251
Query: 323 KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR--IHYHTMADILARA 380
K + T VL AC ++E G + HVH +K + I + + D+ +
Sbjct: 252 KRAGFIAEQATLTSVLRACTGLALLELGMQ-----AHVHIVKYDQDLILNNALVDMYCKC 306
Query: 381 GHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
G L++A N + R +++ S++ Q+G E + ++ G++
Sbjct: 307 GSLEDALRVF-------NQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
N + + I W+ +I G A + +EA+ +F MK G KP T VL AC+ L
Sbjct: 317 NQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLE 376
Query: 147 EGMQVQANVTK-SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITV 204
+G ++ K G+D ++ G + DA K+ ++M CE V+W ++
Sbjct: 377 DGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Query: 205 C--VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
C N+ L E + K + +P++ +LS
Sbjct: 437 CRVQRNMVLAE----YAAKKVIALDPEDAGTYTLLS 468
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 159/422 (37%), Positives = 224/422 (53%), Gaps = 6/422 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W LI Y + EA+ V G++P FT VL ACA ++ L G V A
Sbjct: 7 VSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETGEAVWAA 66
Query: 155 V-TKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+ G+ V+ + Y C A VFD+M R V+W ++ N E
Sbjct: 67 ARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNGHPRE 126
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQLGTALI 272
A+ F M+ G +PD T++ LSACT LG L LG+ + ++ VL N LGTALI
Sbjct: 127 ALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQA-VGMVHWDEVLGNPVLGTALI 185
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
DMYAKCG+ A ++F +M E ++ W+AMILGL G+ + A L MK S + N
Sbjct: 186 DMYAKCGSTSEAWMVFQQMLERDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGVKLNDN 245
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
TF+G+LC+C H G+V DG +YFH M HV+ I P HY M D+ +RAG L+EA+ I +
Sbjct: 246 TFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHYGCMVDLFSRAGLLEEAHQLIGD 305
Query: 393 MPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMW 452
MP N +V ALL IH + ++L+ LEP S N V+++N Y+ G W
Sbjct: 306 MPMLANAVVWGALLGGCKIH---RNADLAEHALKQLIRLEPWNSGNYVMLSNIYSNSGRW 362
Query: 453 EKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVL 512
E + +R MK G++K+ SWVEL G +H+FY G DS IY L+ L + MK +
Sbjct: 363 EDAAKLRLEMKAKGIEKVPASSWVELDGKVHKFYVGDDSHPLSDKIYAKLDELGMEMKAM 422
Query: 513 NF 514
+
Sbjct: 423 GY 424
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 103/219 (47%), Gaps = 5/219 (2%)
Query: 190 MCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
M S VSW +I ++ EA+G + G PD T + VL+AC + +L G
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETG 60
Query: 250 K--WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA 307
+ W + E G + + TA +D+Y KCG + AR +F M+ + W AM+ G A
Sbjct: 61 EAVWAAARQ-EEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYA 119
Query: 308 QHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
+G+ EAL+LF M+ P+ T +G L AC G ++ G R M H +
Sbjct: 120 SNGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLG-RQAVGMVHWDEVLGNP 178
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALL 406
+ + D+ A+ G EA+ M + + IV A++
Sbjct: 179 VLGTALIDMYAKCGSTSEAWMVFQQM-LERDIIVWNAMI 216
>gi|115447355|ref|NP_001047457.1| Os02g0620800 [Oryza sativa Japonica Group]
gi|47847758|dbj|BAD21535.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|47847799|dbj|BAD21575.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536988|dbj|BAF09371.1| Os02g0620800 [Oryza sativa Japonica Group]
Length = 530
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 178/540 (32%), Positives = 263/540 (48%), Gaps = 58/540 (10%)
Query: 14 PPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLS 73
PP P S ++ L C + HL Q+HA V+G L+RF +L
Sbjct: 2 PPAPP------FSSHGDFVAALHRCATLAHLKQLHAHAVVTGRAAAQTTTFHLLRFASLR 55
Query: 74 SSKNLTYARSILCNYVNDSVPIP---------WNNLIRGYAWSDRPREAVWVFIDMKRRG 124
S L YAR + D+ P P + R+++ +F+ M RRG
Sbjct: 56 LS-CLPYARRLF-----DATPSPNVFLYSAMLSAYAAASSHSQEHARDSLALFLRMLRRG 109
Query: 125 -IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGL----------------------- 160
P +F YP VL+A I G+ + + K G
Sbjct: 110 RPAPNQFVYPLVLRAACAI-GVQLVRSIHCHACKDGFYGHDFIRTSLLDGYSRYGMMGDA 168
Query: 161 --------DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
D +V + LV Y + DA +F+ M +R V +WN II C +N
Sbjct: 169 RKLFDGLTDRNVVSWTALVSGYARAGKVGDAIVLFERMPQRDVPAWNAIIAGCTQNGLFV 228
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
EAVG F +M D GF P+ TT+ +LSAC LG L +GK +H + LI
Sbjct: 229 EAVGIFRRMVDEGFRPNGTTVSCLLSACGHLGMLKIGKVIHGYAWRSCVGFGSSVVNGLI 288
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
DMY KCG + A+ +F + + TW+++I LA HG +E A+ +F++M+N + P+ V
Sbjct: 289 DMYGKCGNLMEAKWIFDAFSDRGLTTWNSLINCLALHGCSESAIAVFNSMRNEGVQPDEV 348
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
TF+G+L AC H G V++G RYF M HGI+P HY + D+L RAG ++A FI +
Sbjct: 349 TFVGLLNACTHGGFVDEGLRYFELMCDEHGIEPEIEHYGCVVDLLCRAGRFQDAMNFIND 408
Query: 393 MPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMW 452
M QP+ ++ +LL+A IH ++ + + R LL+L P + +V++AN Y+E G W
Sbjct: 409 MKVQPDEVIWGSLLNACRIH--RHLE-LAEHAIRNLLDLNPSNANYVVMLANLYSEGGFW 465
Query: 453 EKVSNVRRFMK-NVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
E+V VR+ MK +V KK+ G SW+E+ RFYSG D E IY L+ L M++
Sbjct: 466 EEVRKVRKLMKEDVTGKKLPGCSWIEVDRKTRRFYSGDDGHPESEDIYDTLDKLATTMEM 525
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 167/473 (35%), Positives = 243/473 (51%), Gaps = 46/473 (9%)
Query: 77 NLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
+L AR I D +P I W+ +I Y+ S EA+ +F M + G KP +
Sbjct: 265 DLREARRIF-----DEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCF 319
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
L A A + L+ G+ + +VTK G+D DV+ ++L+ Y C + D VFD + E
Sbjct: 320 ACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILE 379
Query: 193 RSVVSWN-------------------------------VIITVCVENLWLGEAVGYFVKM 221
++VV WN IJ +EN + + F +
Sbjct: 380 KNVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTL 439
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
G P+++T VL AC + +L G VH ++I+ G + +GTAL DMYAKCG +
Sbjct: 440 LVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDI 499
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCA 340
G ++ +F RM E N +W+ MI GLA+ G+A E+L LF M + S ++PN + L VL A
Sbjct: 500 GSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFA 559
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPI 400
C+H G+V+ G YF+ ME V+GIKP HY + D+L+R+G L EA FI +PFQP
Sbjct: 560 CSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEAN 619
Query: 401 VLRALLSASSIHDAKYQD-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVR 459
ALLS KY+D + ++L +L S V+++N YA G W VSN+R
Sbjct: 620 AWAALLSGCK----KYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIR 675
Query: 460 RFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVL 512
+ M+ GLKK G SWVE+ +H FYS S + IY L+ L M VL
Sbjct: 676 KLMREKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSDEIYGTLQLLRSEMLVL 728
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 159/368 (43%), Gaps = 75/368 (20%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W I G+ + EA+ +F + G++P + T+ V++AC E+ GM +
Sbjct: 150 VSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGL 209
Query: 155 VTKSGLDSDVYTNNNLV-------------RFYGSCRRK------------------RDA 183
V K+G + + +N+L+ R + ++ R+A
Sbjct: 210 VVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREA 269
Query: 184 CKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
++FD+M ER+ +SW+ +I ++ + EA+ F KM GF+P+ + LSA L
Sbjct: 270 RRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASL 329
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
LS G +H + + G + +G++LID+Y KCG RL+F + E NV W++M+
Sbjct: 330 RALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMV 389
Query: 304 LGLAQHGYA-------------------------------EEALELFSNMKNSSISPNYV 332
G + +G E+ LE+F+ + S +PN
Sbjct: 390 GGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPNKS 449
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHG-IKPMRIHYH-----TMADILARAGHLKEA 386
TF VLCAC ++ G +VHG I + I Y + D+ A+ G + +
Sbjct: 450 TFSSVLCACASIASLDKGM-------NVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSS 502
Query: 387 YTFIMNMP 394
MP
Sbjct: 503 KQVFERMP 510
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 33/251 (13%)
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
++VVSW I+ V N EA+ F ++ + G P++ T V+ AC ELG+ LG +
Sbjct: 147 QNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSI 206
Query: 253 HLQLIERG-----------TVLNCQLG--------------------TALIDMYAKCGAV 281
+++ G L+ ++G TA++D Y + G +
Sbjct: 207 LGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDL 266
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
AR +F M E N +WSAMI +Q GYAEEAL+LFS M PN F L A
Sbjct: 267 REARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSAL 326
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIV 401
+ G + + GI ++ D+ + G + + ++ + N +
Sbjct: 327 ASLRALSAGINIHGHVTKI-GIDKDVFIGSSLIDLYCKCGKPDDG-RLVFDLILEKNVVC 384
Query: 402 LRALLSASSIH 412
+++ SI+
Sbjct: 385 WNSMVGGYSIN 395
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 130/335 (38%), Gaps = 66/335 (19%)
Query: 146 NEGMQVQANV-----TKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
N+G+ Q NV K+G S Y L+ Y +CR+
Sbjct: 33 NQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRK--------------------- 71
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLV---VLSACTELGNLSLGKWVHLQLI 257
F ++ + E D + ++V ++SA + GNL + + ++
Sbjct: 72 -----------------FAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMP 114
Query: 258 ERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALE 317
ER V +ALI K G V + F R NV +W+A I G ++G EAL+
Sbjct: 115 ERNEVS----WSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALK 170
Query: 318 LFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL 377
LF + S + PN VTF V+ AC G G + +K HY ++++ L
Sbjct: 171 LFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLV-----VKAGFEHYLSVSNSL 225
Query: 378 A----RAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP 433
R G + A M R ++S ++I DA + G E RR E+
Sbjct: 226 ITLSLRMGEIDLARRVFDRME-------KRDVVSWTAILDAYVETGDLREARRIFDEMPE 278
Query: 434 RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLK 468
R + + +Y++ G E+ + M G K
Sbjct: 279 RNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFK 313
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 252/482 (52%), Gaps = 11/482 (2%)
Query: 35 LKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LK C K + +IH+ + +G +D + L+ N A + + + D
Sbjct: 121 LKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYV--KCDNFDDALKVF-DDIPD 177
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
+ W +I GY S REA+ F + G+KP F+ VL ACA + G +
Sbjct: 178 KNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWI 237
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
++ SG+ +V+ +L+ Y C A +F M E+ +VSW+ +I N
Sbjct: 238 DRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLP 297
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQLGTA 270
+A+ F +M+ +PD TM+ VLSAC LG L LG W L++R L N LGTA
Sbjct: 298 QQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWAS-SLMDRNEFLSNPVLGTA 356
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
LIDMY+KCG+V A +F+ M++ + W+AM++GL+ +G+A+ LFS ++ I P+
Sbjct: 357 LIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPD 416
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
TF+G+LC C H G V +G ++F+ M+ V + P HY M D+L RAG L EA+ I
Sbjct: 417 ENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLI 476
Query: 391 MNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVG 450
NMP +PN +V ALL +H + + +V ++L+ELEP S N V ++N Y+
Sbjct: 477 NNMPMKPNAVVWGALLGGCKLHKDTH---LAEQVLKKLIELEPWNSGNYVQLSNIYSGNH 533
Query: 451 MWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
WE+ +R MK ++K++ SW+E+ G +H F G S IY L+ L +K
Sbjct: 534 RWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELK 593
Query: 511 VL 512
+
Sbjct: 594 AV 595
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 114/334 (34%), Positives = 186/334 (55%), Gaps = 4/334 (1%)
Query: 18 SNCNSDLLSKARQCLSFLKLCCSK-KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSK 76
+N +S + SKA + ++L + L IHA++ L D +L L+ C L
Sbjct: 5 TNPSSPVFSKALEIKNYLSNGLNFFNQLKHIHARLLRLHLDQDNYLLN-LILCCALDFGS 63
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
T ++ + V + WN +IRG D +A+ ++ M+ G P FT PFVL
Sbjct: 64 --TNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVL 121
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
KACA + G+++ + + K+G D DV+ +L+ Y C DA KVFDD+ +++VV
Sbjct: 122 KACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVV 181
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
SW IIT + + EA+G F K+ ++G +PD +++ VL+AC LG+ + G+W+ +
Sbjct: 182 SWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYI 241
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
+ G N + T+L+DMY KCG + A L+FS M E ++ +WS MI G A +G ++AL
Sbjct: 242 SDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQAL 301
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
+LF M++ ++ P+ T +GVL AC G ++ G
Sbjct: 302 DLFFQMQSENLKPDCYTMVGVLSACATLGALDLG 335
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 138/411 (33%), Positives = 227/411 (55%), Gaps = 3/411 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I G A + +A+ + +M ++P FT VL AE L +G ++
Sbjct: 202 VSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGY 261
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
++G D+DV+ ++L+ Y C R D+C+VF + + +SWN II CV+N E
Sbjct: 262 AIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEG 321
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ +F +M +P+ + ++ AC L L LGK +H +I N + +AL+DM
Sbjct: 322 LKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDM 381
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG + AR +F +ME ++ +W+AMI+G A HG+A +A+ LF M+ + PNYV F
Sbjct: 382 YAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAF 441
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ VL AC+HAG+V++ ++YF+ M + I P HY +AD+L R G L+EAY FI +M
Sbjct: 442 MAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMH 501
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
+P V LL+A +H + +V ++L ++P+ V+++N Y+ G W+
Sbjct: 502 IEPTGSVWSTLLAACRVHK---NIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKD 558
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+R M++ G+KK SW+E+ +H F +G S I + L+ L
Sbjct: 559 ARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVL 609
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 156/338 (46%), Gaps = 42/338 (12%)
Query: 40 SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP--- 96
SK Q+HAQI + L + + L ++ S+ NL + ++ N S+P P
Sbjct: 20 SKSQAKQLHAQILRTSLPSPSL----LSTILSIYSNLNLLHDSLLIFN----SLPSPPTT 71
Query: 97 --WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
W ++IR Y ++ FI M G P +P VLK+C + L G V
Sbjct: 72 LAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGC 131
Query: 155 VTKSGLDSDVYTNNNLVRFYGS-----------------------CRRKRDAC------K 185
+ + G+ D+YT N L+ Y ++++++ K
Sbjct: 132 IIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRK 191
Query: 186 VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGN 245
VF+ M +R +VSWN +I+ +N +A+ +M + PD T+ VL E N
Sbjct: 192 VFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVN 251
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
L GK +H I G + +G++LIDMYAKC V + +F + + + +W+++I G
Sbjct: 252 LLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAG 311
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
Q+G +E L+ F M + I PN+V+F ++ AC H
Sbjct: 312 CVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAH 349
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 163/473 (34%), Positives = 255/473 (53%), Gaps = 10/473 (2%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+IH ++ SG D + LV L A+ + +V + WN++I GY+
Sbjct: 420 EIHMELVRSGFALDGFVSSALVDM--YGKCGCLEMAKEVFEQIQRKNV-VSWNSMIAGYS 476
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ + +F M GI+PT T +L AC+ L G + + ++ +++D++
Sbjct: 477 LKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIF 536
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N++L+ Y C A VF +M + +VVSWNV+I+ V+ EA+ F M+ G
Sbjct: 537 VNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAG 596
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+PD T VL AC++L L GK +H +IE +N + AL+DMYAKCGAV A
Sbjct: 597 VKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEAL 656
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F+++ E + +W++MI HG A EAL+LF M+ S P+ VTFL +L AC+HAG
Sbjct: 657 HIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAG 716
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP-FQPNPIVLRA 404
+V++G YF++M +G KP HY + D+L R G L+EAY + P + + +L
Sbjct: 717 LVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLST 776
Query: 405 LLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKN 464
L SA +H K D +G ++ R L+E +P +I++N YA V W++V VR +K
Sbjct: 777 LFSACHLH--KKLD-LGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKE 833
Query: 465 VGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM---KVLNF 514
+GLKK G SW+E+G IH F S + IY+ + L H+ +VL+F
Sbjct: 834 LGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEKYQVLSF 886
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 180/353 (50%), Gaps = 12/353 (3%)
Query: 47 IHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILCNYVNDSVPIP-WNNLIR 102
IH +I GLQN+ + K L+ C L S L + + + + I WN L+
Sbjct: 217 IHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF------QTIENPLDITLWNGLMA 270
Query: 103 GYAWSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
+ E + VF + +KP FTYP VLKAC+ + + G V +V KSG
Sbjct: 271 ACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFA 330
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
DV ++ V Y C DA K+FD+M ER V SWN +I+ ++ +A+ F +M
Sbjct: 331 MDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEM 390
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
K GF+PD T+ V+S+C L +L GK +H++L+ G L+ + +AL+DMY KCG +
Sbjct: 391 KVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCL 450
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
A+ +F +++ NV +W++MI G + G ++ +ELF M I P T +L AC
Sbjct: 451 EMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMAC 510
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ + ++ G ++ H + ++ ++ D+ + G++ A NMP
Sbjct: 511 SRSVNLQLG-KFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMP 562
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 11/129 (8%)
Query: 238 SACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEE-INV 296
SA EL LGK +H +++ G N L +LI++Y C A+L+F +E +++
Sbjct: 207 SALEEL----LGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDI 262
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKN-SSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
W+ ++ ++ E LE+F + + + P+ T+ VL AC+ G V G
Sbjct: 263 TLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYG----- 317
Query: 356 EMEHVHGIK 364
+M H H IK
Sbjct: 318 KMVHTHVIK 326
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 234/419 (55%), Gaps = 12/419 (2%)
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P I W +I Y+ ++A+ + + M R ++P +TY VL++C +G++
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSC---NGMS 176
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
+ + + K GL+SDV+ + L+ + DA VFD+M + WN II
Sbjct: 177 DVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+N A+ F +MK GF ++ T+ VL ACT L L LG H+ +++ L
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDL--I 294
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
L AL+DMY KCG++ A +F++M+E +V TWS MI GLAQ+GY++EAL+LF MK+S
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSG 354
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
PNY+T +GVL AC+HAG++EDG+ YF M+ ++GI P+R HY M D+L +AG L +A
Sbjct: 355 TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDA 414
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKY 446
+ M +P+ + R LL A + + ++++ L+P + +++N Y
Sbjct: 415 VKLLNEMECEPDAVTWRTLLGACRVQRNMV---LAEYAAKKVIALDPEDAGTYTLLSNIY 471
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
A W+ V +R M++ G+KK G SW+E+ IH F G +S ++ + + L L
Sbjct: 472 ANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQL 530
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 161/357 (45%), Gaps = 18/357 (5%)
Query: 83 SILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI 142
++ C+Y + + + R D PR A+ ++ G+ TY ++K C
Sbjct: 16 TLRCSYSSTDQTLLLSEFTRLCYQRDLPR-AMKAMDSLQSHGLWADSATYSELIKCCISN 74
Query: 143 SGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII 202
++EG + ++ +G ++ N L+ Y DA ++FD M +R+V+SW +I
Sbjct: 75 RAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMI 134
Query: 203 TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV 262
+ + +A+ V M P+ T VL +C + ++ + +H +I+ G
Sbjct: 135 SAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLE 191
Query: 263 LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM 322
+ + +ALID++AK G A +F M + W+++I G AQ+ ++ ALELF M
Sbjct: 192 SDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRM 251
Query: 323 KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR--IHYHTMADILARA 380
K + T VL AC ++E G + HVH +K + I + + D+ +
Sbjct: 252 KRAGFIAEQATLTSVLRACTGLALLELGMQ-----AHVHIVKYDQDLILNNALVDMYCKC 306
Query: 381 GHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
G L++A N + R +++ S++ Q+G E + ++ G++
Sbjct: 307 GSLEDALRVF-------NQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
N + + I W+ +I G A + +EA+ +F MK G KP T VL AC+ L
Sbjct: 317 NQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLE 376
Query: 147 EGMQVQANVTK-SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITV 204
+G ++ K G+D ++ G + DA K+ ++M CE V+W ++
Sbjct: 377 DGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Query: 205 C--VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
C N+ L E + K + +P++ +LS
Sbjct: 437 CRVQRNMVLAE----YAAKKVIALDPEDAGTYTLLS 468
>gi|242065790|ref|XP_002454184.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
gi|241934015|gb|EES07160.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
Length = 530
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 180/531 (33%), Positives = 264/531 (49%), Gaps = 58/531 (10%)
Query: 29 RQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
R ++ L C ++ HL Q+HA V+G L+RF S LTYAR +
Sbjct: 10 RDFVAVLSRCSTRAHLEQLHAHAFVAGRAAAQTTTFHLIRFAAFRLS-CLTYARHLF--- 65
Query: 89 VNDSVPIPWNNLIRG---------------YAWSDRPREAVWVFIDMKRRG-IKPTEFTY 132
D+ P P L R+A+ +F+ M R G P +F Y
Sbjct: 66 --DATPHPSVFLYSAILSAYVSAAATASSYAHAHAHARDALALFLRMLRHGRPAPNQFVY 123
Query: 133 PFVLKACAEI--------------SGL---------------NEGMQVQANVTKSGL-DS 162
P VL+A + + SG GM A GL +
Sbjct: 124 PLVLRAASGVGVGIVKSIHSHACKSGFCGHDIIRTSVLDGYSRHGMMADARKLFDGLTER 183
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
+V + LV Y + DA +F+ M ER V +WN II C +N EAVG F +M
Sbjct: 184 NVVSWTALVSGYARAGKVGDAIVLFERMPERDVAAWNAIIAGCSQNGLFVEAVGIFGRMV 243
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
GF P+ TT+ VLSAC LG L +GK +H + LIDMY KCG +
Sbjct: 244 GAGFRPNATTVSCVLSACGHLGMLKIGKLIHCYAWRTCVGFGSSVLNGLIDMYGKCGNLE 303
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
AR +F + + ++ TW+++I LA HG+++ A+ +F+ M+ + P+ VTF+G+L AC
Sbjct: 304 GARWIFDEVSDRSLTTWNSLINCLALHGHSKCAISVFNEMRGEGVEPDVVTFVGLLNACT 363
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVL 402
H G V++G RYF M+H HGI+P HY + D+L RAG ++A I +M + + ++
Sbjct: 364 HGGFVDEGIRYFELMQHEHGIEPEIEHYGCIIDLLGRAGRFQDALNVISDMRIEADEVMW 423
Query: 403 RALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFM 462
+LL+A +H Q R+LLEL+P + +V++AN Y+E G+WE+V VR+F+
Sbjct: 424 GSLLNACRVH---RQVEFAELAIRKLLELDPNNANYVVMLANVYSEGGLWEEVRKVRKFV 480
Query: 463 K--NVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
K N+G KK+ G SW+E+ HRFYSG D+ E IY LE L M +
Sbjct: 481 KEENIG-KKLPGCSWIEVDRKTHRFYSGDDAHPESENIYDTLEDLAASMDL 530
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 159/443 (35%), Positives = 234/443 (52%), Gaps = 34/443 (7%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN+LI GY +PREA+ ++ M +KP E T V+ ACA++ L G ++
Sbjct: 221 VSWNSLINGYVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRY 280
Query: 155 VTKSGLDSDVYTNNNLVRFYGSC------------RRKRD-------------------A 183
+ +SGL+ + N L+ Y C RK+ A
Sbjct: 281 IEESGLNLKISLVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMA 340
Query: 184 CKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
K+F DM E++VV+WN +I CV+ EA+ F +M+ +PD+ TML LSAC++L
Sbjct: 341 GKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQL 400
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
G L G W H + + L+ LGTALIDMYAKCG + A +F+ M N TW+A+I
Sbjct: 401 GALDTGMWTHNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAII 460
Query: 304 LGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
GLA +G +A+ FS M +S + P+ +TFLGVL AC H G+VE+G +YF +M+ +
Sbjct: 461 GGLALYGNVNDAIFYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQMKSRFNL 520
Query: 364 KPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNE 423
P HY M ++L RAG L+EA I MP + + +V AL A IH +G
Sbjct: 521 SPQPKHYSCMVNLLGRAGLLEEAEELIKTMPMEADAMVWGALFFACGIHRNLL---IGER 577
Query: 424 VRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIH 483
+LL+L+P S V++AN Y E G WE+ N+R+ M G++K G S +E+ G I+
Sbjct: 578 AASKLLDLDPHDSGIYVLLANMYREAGKWEEAQNIRKMMMERGVEKTPGSSSIEVNGIIN 637
Query: 484 RFYSGYDSQVELAGIYQILETLN 506
F S + IY+ +N
Sbjct: 638 EFIVRDKSHPQSEQIYECFNLIN 660
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 132/413 (31%), Positives = 203/413 (49%), Gaps = 35/413 (8%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LS L+ C S L QI AQ+ ++GL D L+ FC +S S+NL Y IL N N
Sbjct: 57 LSLLENCKSFSQLKQIQAQMILTGLILDGFASSRLISFCAISESRNLDYCIKILNNLQNP 116
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
+V WN +IRG S+ P++ + ++ M R G +P +TY F+ K CA + G +
Sbjct: 117 NV-FSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLVLSYMGFE 175
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+ V K G D D+Y N ++ S A KVFD+ C R +VSWN +I V
Sbjct: 176 ILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLINGYVRRRQ 235
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
EA+G + +M +PDE TM+ V+SAC +L +L LG+ +H + E G L L A
Sbjct: 236 PREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNA 295
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE----------------- 313
L+DMY KCG + ++LF M + V +W+ MI+G A++G +
Sbjct: 296 LMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAW 355
Query: 314 --------------EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
EALELF M+ S++ P+ VT L L AC+ G ++ G + H
Sbjct: 356 NAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGM-WTHNYIK 414
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
H + + D+ A+ G++ +A MP + N + A++ +++
Sbjct: 415 KHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMP-RRNSLTWTAIIGGLALY 466
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/406 (35%), Positives = 224/406 (55%), Gaps = 3/406 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN ++ GY S + + +F M ++G + +FT VLK C + +N+G QV A
Sbjct: 490 VAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAY 549
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
KSG D D++ ++ ++ Y C A FD + V+W +I+ C+EN A
Sbjct: 550 AIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERA 609
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M+ +G PDE T+ + A + L L G+ +H ++ + +GT+L+DM
Sbjct: 610 LHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDM 669
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG++ A LF R+E +N+ W+AM++GLAQHG +EAL+LF M++ I P+ VTF
Sbjct: 670 YAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTF 729
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+GVL AC+H+G+V + Y+Y M +GIKP HY +AD L RAG +KEA I +M
Sbjct: 730 IGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMS 789
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
+ + + R LL+A + G V +LLELEP S V+++N YA W++
Sbjct: 790 MEASASMYRTLLAACRVQG---DTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDE 846
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQ 500
+ R MK +KK G SW+E+ IH F S + IY+
Sbjct: 847 MKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYK 892
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 127/271 (46%), Gaps = 7/271 (2%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I N ++ GY + + + F+DM ++ + T+ VL + L G QV
Sbjct: 288 ISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCM 347
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K GLD + +N+L+ Y R+ A VF++M ER ++SWN +I ++ EA
Sbjct: 348 ALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEA 407
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGN-LSLGKWVHLQLIERGTVLNCQLGTALID 273
V F+++ G +PD TM VL A + L LSL K +H+ I+ V + + TALID
Sbjct: 408 VCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALID 467
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
Y++ + A +LF R ++ W+AM+ G Q + LELF+ M + T
Sbjct: 468 AYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFT 526
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIK 364
VL C + G + H + IK
Sbjct: 527 LATVLKTCGFLFAINQGKQV-----HAYAIK 552
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 127/269 (47%), Gaps = 13/269 (4%)
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
L+ Y + +E +F +M R + + +LKA E+ E + + + SG
Sbjct: 193 LVNIYLKFGKVKEGRVLFEEMPYRDV----VLWNLMLKAYLEMGFKEEAIDLSSAFHTSG 248
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS----VVSWNVIITVCVENLWLGEAV 215
L + T L R G + K F++ + S ++S N I++ + +
Sbjct: 249 LHPNEITLRLLSRISGD-DSEAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALL 307
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY 275
F+ M + E D+ T ++VL+ L +L+LG+ VH ++ G L + +LI+MY
Sbjct: 308 KCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMY 367
Query: 276 AKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFL 335
K +G AR +F+ M E ++ +W+++I G+AQ EA+ LF + + P++ T
Sbjct: 368 CKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMT 427
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIK 364
VL A A + +G ++ HVH IK
Sbjct: 428 SVLKA---ASSLPEGLSLSKQI-HVHAIK 452
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 9/174 (5%)
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV-------CVENLWLGEAVGYFVK 220
NNL+ Y C A +VFD M ER +VSWN I+ VEN+ EA F
Sbjct: 85 NNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENV--KEAFLLFRI 142
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
++ T+ +L C G + + H + G + + AL+++Y K G
Sbjct: 143 LRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGK 202
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
V R+LF M +V W+ M+ + G+ EEA++L S S + PN +T
Sbjct: 203 VKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITL 256
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 168/488 (34%), Positives = 254/488 (52%), Gaps = 67/488 (13%)
Query: 53 VSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPRE 112
V G ++ L+EL+ +++ S + YA + ++ + WN +IRG A S P
Sbjct: 3 VKGFNSNTSALRELIYASSIAISGTMAYAHQLF-PHITEPDTFMWNTMIRGSAQSPSPLN 61
Query: 113 AVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVR 172
A+ ++ M+ ++P +FT+PFVLKAC + + G V V + G +S+ + N L+
Sbjct: 62 AISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIY 121
Query: 173 --------------FYGSCRR-------------KRD----ACKVFDDMCERSVVSWNVI 201
F GS +R +R A ++FD+M + +VSWNV+
Sbjct: 122 FHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVM 181
Query: 202 ITVCVEN-------------------LWLGEAVGY------------FVKMKDLGFEPDE 230
IT + W GY F +M+ +G PDE
Sbjct: 182 ITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDE 241
Query: 231 TTMLVVLSACTELGNLSLGKWVHLQLIERG-TVLNCQLGTALIDMYAKCGAVGCARLLFS 289
TML +LSACT+LG+L G+ +H + E G L+ LG ALIDMYAKCG++ A +F
Sbjct: 242 VTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQ 301
Query: 290 RMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVED 349
M E +V TW++++ GLA HG+AE+++ LF+ M+ I P+ +TF+GVL AC+HAG VE+
Sbjct: 302 GMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEE 361
Query: 350 GYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSAS 409
G +YF M + I+P HY M D+L RAG L EA+ FI M +PN IV R LL A
Sbjct: 362 GRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGAC 421
Query: 410 SIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKK 469
IH +G +LL++ S + V+++N YA G W+ V VR+ M + G++K
Sbjct: 422 RIHGNVE---LGRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRK 478
Query: 470 MKGMSWVE 477
G S +E
Sbjct: 479 EAGCSLIE 486
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 158/431 (36%), Positives = 230/431 (53%), Gaps = 9/431 (2%)
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D +P +PW LI Y + REAV V + G++P FT VL ACA I+
Sbjct: 128 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 187
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L G V + G+ V+ V Y C A +VFD M + V+W ++
Sbjct: 188 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 247
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL- 263
N EA+ F+ M+ G +PD + LSACT LG L LG+ +++++ L
Sbjct: 248 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQA-IRMVDWDEFLD 306
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
N LGTALIDMYAKCG+ A ++F +M + ++ W+AMILGL G+ + A L M+
Sbjct: 307 NPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQME 366
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
S + N TF+G+LC+C H G+++DG RYFH M ++ I P HY M D+L+RAG L
Sbjct: 367 KSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLL 426
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
+EA+ + +MP N ++L ALL IH + V ++L+ LEP S N V+++
Sbjct: 427 QEAHQLVDDMPMPANAVILGALLGGCKIH---RNTELAEHVLKQLILLEPWNSGNYVMLS 483
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N Y+ G WE + +R MK G++K+ SWVE G +H F G S IY+ L+
Sbjct: 484 NIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLD 543
Query: 504 TLNLHMKVLNF 514
L L MK + +
Sbjct: 544 ELGLEMKTMGY 554
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 108/225 (48%), Gaps = 1/225 (0%)
Query: 127 PTEFTYPFVLKACAEIS-GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACK 185
P+ T P LK+ + + L G Q+ A K ++ + +L+ Y C A +
Sbjct: 68 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 127
Query: 186 VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGN 245
VFD+M S V W +IT ++ L EAV G PD T + VL+AC + +
Sbjct: 128 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 187
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
L+ G+ V + G + + TA +D+Y KCG + AR +F +M + W AM+ G
Sbjct: 188 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 247
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
A +G+ EAL+LF M+ + P+ G L AC G ++ G
Sbjct: 248 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLG 292
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 164/501 (32%), Positives = 254/501 (50%), Gaps = 39/501 (7%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+H + GLQ + + LV+ L L AR + + + I WN +I Y
Sbjct: 160 QLHGHVLKHGLQYNVFVHTALVQMYLLCGQ--LDTARGVF-DVCPKADVITWNMIISAYN 216
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ E+ +F+ M+ + + PT T VL AC+++ L G +V + V ++S++
Sbjct: 217 KVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLV 276
Query: 166 TNNNLVRFYGSCRRKRDACKVF-------------------------------DDMCERS 194
N ++ Y C A +F D M E+
Sbjct: 277 LENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKD 336
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHL 254
VSW +I + + EA+ F M+ +PDE TM+ VL+AC LG L LG+W+
Sbjct: 337 YVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIR- 395
Query: 255 QLIERGTVLN-CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
I+R + N + ALIDMY KCG V A +F M + + +TW+AMI+GLA +G+ E
Sbjct: 396 TYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGE 455
Query: 314 EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
+AL++FSNM +SI P+ +T++GVL AC H G+V+ G +YF M HGI+P HY +
Sbjct: 456 KALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCL 515
Query: 374 ADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP 433
D+LARAG LKEAY I NMP + N IV ALL+ ++ + + V +++LELEP
Sbjct: 516 VDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVY---RESDMAEMVVKQILELEP 572
Query: 434 RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQV 493
V++ N YA W + +R+ M + G+KK G S +E+ G +H F +G S
Sbjct: 573 DNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHP 632
Query: 494 ELAGIYQILETLNLHMKVLNF 514
+ I L+ + +K+ +
Sbjct: 633 QTKNIDAKLDKMTQDLKLAGY 653
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/354 (31%), Positives = 172/354 (48%), Gaps = 40/354 (11%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+S L+ C S L Q+H Q GL + + ++ FC + YAR + D
Sbjct: 43 ISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLF-----D 97
Query: 92 SVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+P P WN +IRGY+ D P+ V ++++M RRG+KP +T+PF+ K L
Sbjct: 98 EIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEY 157
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G Q+ +V K GL +V+ + LV+ Y C + A VFD + V++WN+II+ +
Sbjct: 158 GRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNK 217
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
E+ F+ M+D P T+++VLSAC++L +L GK VH + N L
Sbjct: 218 VGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVL 277
Query: 268 GTALIDMYAKC-------------------------------GAVGCARLLFSRMEEINV 296
A+IDMYA C G + AR F +M E +
Sbjct: 278 ENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDY 337
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
+W+AMI G + +EALELF NM+ +++ P+ T + VL AC H G +E G
Sbjct: 338 VSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELG 391
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 156/472 (33%), Positives = 254/472 (53%), Gaps = 13/472 (2%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
++H QI G ++D + LV + + A ++ V+ ++ + W ++I GYA
Sbjct: 194 RVHGQIFRHGFESDVFVQNGLVAL--YAKCGEIVRANAVFGRLVDRTI-VSWTSIISGYA 250
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ +P EA+ +F +M++ ++P VL+A ++ L G + V K GL+ +
Sbjct: 251 QNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFD 310
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
+L Y C A F+ + S++ WN +I+ V+N + EA+ F MK
Sbjct: 311 LLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKN 370
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWV--HLQLIE-RGTVLNCQLGTALIDMYAKCGAVG 282
PD T+ ++AC ++G+L L +W+ ++ + E R V+ + T+LID YAKCG+V
Sbjct: 371 IRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVI---VNTSLIDTYAKCGSVD 427
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
AR +F R+ + +V WSAM++G HG E++ LF M+ + +SPN VTF+G+L AC
Sbjct: 428 MARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACK 487
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVL 402
++G+VE+G+ FH M +GI+P HY + D+L RAGHL AY F+MNMP +P V
Sbjct: 488 NSGLVEEGWDLFHRMRD-YGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVW 546
Query: 403 RALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFM 462
ALLSA IH +G RL L+P + + V ++N YA +W+ V+ VR M
Sbjct: 547 GALLSACKIHR---HVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLM 603
Query: 463 KNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ GL K G S +E+ G + F +G + I++ +E L +K F
Sbjct: 604 REKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLERRLKEAGF 655
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 203/404 (50%), Gaps = 6/404 (1%)
Query: 9 TNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVR 68
T H F +CN + S + K HL QI+A++ V+GLQ ++ +LV
Sbjct: 57 TTH-FNNNKDDCNESTFKPDKFYASLIDDSIHKTHLNQIYAKLLVTGLQYGGFLIAKLVN 115
Query: 69 FCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPT 128
S+ ++ AR + + + V + WN ++R Y+ A+ ++ M+ + P
Sbjct: 116 --KASNIGEVSCARKLFDKFPDPDVFL-WNAIVRCYSRHGFFGHAIEMYARMQVACVSPD 172
Query: 129 EFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD 188
F++P VLKAC+ + L G +V + + G +SDV+ N LV Y C A VF
Sbjct: 173 GFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFG 232
Query: 189 DMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSL 248
+ +R++VSW II+ +N EA+ F +M+ PD ++ VL A T++ +L
Sbjct: 233 RLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEH 292
Query: 249 GKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ 308
GK +H +I+ G L +L +YAKCG V ARL F+++E ++ W+AMI G +
Sbjct: 293 GKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVK 352
Query: 309 HGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRI 368
+GYAEEA+ELF MK+ +I P+ +T + AC G +E R+ E + + I
Sbjct: 353 NGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELA-RWMDEYISMSEFRNDVI 411
Query: 369 HYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
++ D A+ G + A F+ + + +V A++ +H
Sbjct: 412 VNTSLIDTYAKCGSVDMA-RFVFDRIPDKDVVVWSAMMVGYGLH 454
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 228/416 (54%), Gaps = 4/416 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W LI GY D + VF M ++ F++ ++AC I G Q+ A
Sbjct: 177 VSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAA 236
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
VTK G +S++ N+++ Y C +A + F +M +R +++WN +I E E+
Sbjct: 237 VTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIA-GYERSNPTES 295
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F M+ GF P+ T +++AC L L+ G+ +H ++I RG N L ALIDM
Sbjct: 296 LYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDM 355
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG + + +F M ++ +W+AM++G HGY EEA+ELF M S I P+ V F
Sbjct: 356 YSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVF 415
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ +L AC+HAG+V++G RYF M + I P + Y + D+L RAG ++EAY I +MP
Sbjct: 416 MAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMP 475
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
F+P+ V L A H +G R+L+L P + V+++N YA G W +
Sbjct: 476 FKPDECVWGPFLGACKAHTFP---NLGKLAAHRILDLRPHMAGTYVMLSNIYAADGKWGE 532
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+ +R+ MK +G KK G SWVE+G ++ F G + ++ GIYQ+LE L HMK
Sbjct: 533 FARLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDEVGSKIEGIYQVLENLIGHMK 588
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 116/248 (46%), Gaps = 2/248 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +I GY + A VF +M + P FT VLKAC + L+ G V
Sbjct: 75 VAWTVMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACKGMKCLSYGRLVHGL 134
Query: 155 VTKSGLDSDVYTNNNLVRFYGS-CRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
K GLD +Y +N L+ Y + C DAC VF + ++ VSW +I
Sbjct: 135 AIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYG 194
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
+ F +M E + + + + ACT +G+ + G+ +H + + G N + +++D
Sbjct: 195 GLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILD 254
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MY +C A F M + ++ TW+ +I G + E+L +FS M++ SPN T
Sbjct: 255 MYCRCSCFSEANRYFYEMNQRDLITWNTLIAGY-ERSNPTESLYVFSMMESEGFSPNCFT 313
Query: 334 FLGVLCAC 341
F ++ AC
Sbjct: 314 FTSIMAAC 321
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 12/218 (5%)
Query: 182 DACKVFDDMCERSVVSWNVII---TVCVENL--WLGEAVGYFVKMKDLGFEPDETTMLVV 236
+A +FD+M ER VV+W V+I T C + W+ F +M + +P+ T+ V
Sbjct: 61 EARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWM-----VFCEMMNEELDPNAFTISSV 115
Query: 237 LSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG-AVGCARLLFSRMEEIN 295
L AC + LS G+ VH I+ G + AL+DMYA C ++ A ++F + N
Sbjct: 116 LKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKN 175
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
+W+ +I G L +F M + N +F + AC G G + H
Sbjct: 176 EVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQ-LH 234
Query: 356 EMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
HG + +++ D+ R EA + M
Sbjct: 235 AAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEM 272
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
L T LI Y G +G AR LF M E +V W+ MI G A +F M N
Sbjct: 45 LATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEE 104
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
+ PN T VL AC + G R H + HG+
Sbjct: 105 LDPNAFTISSVLKACKGMKCLSYG-RLVHGLAIKHGL 140
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 160/418 (38%), Positives = 229/418 (54%), Gaps = 9/418 (2%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDM--KRRGIKPTEFTYPFVLKACAEISGLNEG--MQVQ 152
W +I GY E + +F M ++P T +L AC+ + G + V
Sbjct: 194 WTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSVF 253
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
+V K L++ + T L+ Y C A ++FD + +++ SWN IIT CV+ L
Sbjct: 254 IDVNKIPLNTILVTA--LIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLE 311
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
EA+ + MK +P+E T++ VLSAC LG L LG+ VHL L G LN L TAL+
Sbjct: 312 EAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALV 371
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
DMYAKCG + A L+F + E +V W+AMILGLA HG ++L +FS M + + PN V
Sbjct: 372 DMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDV 431
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
TF+GVL ACNH+G+VE+G F M HG+ P HY M D+L RAGHLKEAY + N
Sbjct: 432 TFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQN 491
Query: 393 MPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMW 452
M P+ I+ ALLSA IH + +++ ++ + ++++N YA G W
Sbjct: 492 MLIPPDSIIWGALLSACRIH---RNLELADKISETIMASQDPNIGFCILLSNIYASSGRW 548
Query: 453 EKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+ V+ VRR +K +KK G SWVE+ G +HRF + ++ IY E L H+K
Sbjct: 549 KDVARVRRQVKEKRIKKPSGCSWVEVDGVVHRFVVEDTTHLKSGEIYGAYEILVNHLK 606
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/393 (32%), Positives = 198/393 (50%), Gaps = 50/393 (12%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LS L+ S ++QIHAQ + GL ++ +L+ ++ YAR +L D
Sbjct: 3 LSLLRTATSLTQIHQIHAQTLIHGLPLQTHLIPKLIDL------HSIDYARFVL-----D 51
Query: 92 SVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
P P WN+LIR Y P+ ++++++ M R KP+ FT+PFVLKAC+ + + E
Sbjct: 52 QTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLE 111
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G Q+ +V + G SD++ N+L+ Y C R A +DDM R VSWN II+ V+
Sbjct: 112 GEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQ 171
Query: 208 ------------------NL--WLGEAVGY-----FVKMKDL---------GFEPDETTM 233
N+ W GY FV+M L +P+ TM
Sbjct: 172 WGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATM 231
Query: 234 LVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEE 293
+ +LSAC+ L N +G+++ + + LN L TALIDMY+KCG V A +F +
Sbjct: 232 VCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSC 291
Query: 294 INVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRY 353
N+ +W+A+I G Q G EEA++L+ +MK S+ PN +T + VL AC G +E G R
Sbjct: 292 KNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELG-RE 350
Query: 354 FHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
H +G+ I + D+ A+ G + +A
Sbjct: 351 VHLYLGRNGLDLNVILATALVDMYAKCGKIDDA 383
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 251/482 (52%), Gaps = 11/482 (2%)
Query: 35 LKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LK C K + +IH+ + +G +D + L+ N A + + + D
Sbjct: 121 LKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYV--KCDNFDDALKVF-DDIPD 177
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
+ W +I GY S REA+ F + G+KP F+ VL ACA + G +
Sbjct: 178 KNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWI 237
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
++ SG+ +V+ +L+ Y C A +F M E+ +VSW+ +I N
Sbjct: 238 DRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLP 297
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQLGTA 270
+A+ F +M+ +PD TM+ VLSAC LG L LG W L++R L N LGTA
Sbjct: 298 QQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWAS-SLMDRNEFLSNPVLGTA 356
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
LIDMY+KCG+V A +F+ M+ + W+AM++GL+ +G+A+ LFS ++ I P+
Sbjct: 357 LIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPD 416
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
TF+G+LC C H G V +G ++F+ M+ V + P HY M D+L RAG L EA+ I
Sbjct: 417 ENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLI 476
Query: 391 MNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVG 450
NMP +PN +V ALL +H + + +V ++L+ELEP S N V ++N Y+
Sbjct: 477 NNMPMKPNAVVWGALLGGCKLHKDTH---LAEQVLKKLIELEPWNSGNYVQLSNIYSGNH 533
Query: 451 MWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
WE+ +R MK ++K++ SW+E+ G +H F G S IY L+ L +K
Sbjct: 534 RWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELK 593
Query: 511 VL 512
+
Sbjct: 594 AV 595
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 173/308 (56%), Gaps = 3/308 (0%)
Query: 43 HLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIR 102
L IHA++ L D +L L+ C L T ++ + V + WN +IR
Sbjct: 31 QLKHIHARLLRLHLDQDNYLLN-LILCCALDFGS--TNYSKLVFSQVKEPNIFLWNTMIR 87
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
G D +A+ ++ M+ G P FT PFVLKACA + G+++ + + K+G D
Sbjct: 88 GLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDH 147
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
DV+ +L+ Y C DA KVFDD+ +++VVSW IIT + + EA+G F K+
Sbjct: 148 DVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLL 207
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
++G +PD +++ VL+AC LG+ + G+W+ + + G N + T+L+DMY KCG +
Sbjct: 208 EMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLE 267
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
A L+FS M E ++ +WS MI G A +G ++AL+LF M++ ++ P+ T +GVL AC
Sbjct: 268 RANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACA 327
Query: 343 HAGMVEDG 350
G ++ G
Sbjct: 328 TLGALDLG 335
>gi|296089801|emb|CBI39620.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 228/416 (54%), Gaps = 4/416 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W LI GY D + VF M ++ F++ ++AC I G Q+ A
Sbjct: 161 VSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAA 220
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
VTK G +S++ N+++ Y C +A + F +M +R +++WN +I E E+
Sbjct: 221 VTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIA-GYERSNPTES 279
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F M+ GF P+ T +++AC L L+ G+ +H ++I RG N L ALIDM
Sbjct: 280 LYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDM 339
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG + + +F M ++ +W+AM++G HGY EEA+ELF M S I P+ V F
Sbjct: 340 YSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVF 399
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ +L AC+HAG+V++G RYF M + I P + Y + D+L RAG ++EAY I +MP
Sbjct: 400 MAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMP 459
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
F+P+ V L A H +G R+L+L P + V+++N YA G W +
Sbjct: 460 FKPDECVWGPFLGACKAHTFP---NLGKLAAHRILDLRPHMAGTYVMLSNIYAADGKWGE 516
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+ +R+ MK +G KK G SWVE+G ++ F G + ++ GIYQ+LE L HMK
Sbjct: 517 FARLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDEVGSKIEGIYQVLENLIGHMK 572
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 114/243 (46%), Gaps = 2/243 (0%)
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
+I GY + A VF +M + P FT VLKAC + L+ G V K G
Sbjct: 64 MIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHG 123
Query: 160 LDSDVYTNNNLVRFYGS-CRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
LD +Y +N L+ Y + C DAC VF + ++ VSW +I + F
Sbjct: 124 LDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVF 183
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
+M E + + + + ACT +G+ + G+ +H + + G N + +++DMY +C
Sbjct: 184 RQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRC 243
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
A F M + ++ TW+ +I G + E+L +FS M++ SPN TF ++
Sbjct: 244 SCFSEANRYFYEMNQRDLITWNTLIAGY-ERSNPTESLYVFSMMESEGFSPNCFTFTSIM 302
Query: 339 CAC 341
AC
Sbjct: 303 AAC 305
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 155/417 (37%), Positives = 220/417 (52%), Gaps = 3/417 (0%)
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N LI G + R EA+ +F ++++ G+ T VLK+ A + + QV A K
Sbjct: 373 NALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVK 432
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
G D + N L+ Y C DA +VF++ +++ +IT + A+
Sbjct: 433 IGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKL 492
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
F++M G EPD + +L+AC L GK VH LI+R + + G AL+ YAK
Sbjct: 493 FMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAK 552
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CG++ A L FS + E V +WSAMI GLAQHG+ + ALELF M + I+PN++T V
Sbjct: 553 CGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSV 612
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
LCACNHAG+V++ RYF+ M+ + GI HY M D+L RAG L +A + +MPFQ
Sbjct: 613 LCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQA 672
Query: 398 NPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSN 457
N + ALL AS +H +G +L LEP S V++AN YA GMW +V+
Sbjct: 673 NASIWGALLGASRVHK---DPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAK 729
Query: 458 VRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
VR+ MK+ +KK MSW+E+ +H F G S IY L L M F
Sbjct: 730 VRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGF 786
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 169/337 (50%), Gaps = 11/337 (3%)
Query: 89 VNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D +P P W++L+ Y+ + PR A+ F M+ G+ EF P VLK C +
Sbjct: 59 VFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVPDAR 117
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIIT 203
L G QV A +G SDV+ N LV YG DA +VF++ ER+ VSWN +++
Sbjct: 118 L--GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMS 175
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
V+N G+A+ F +M G +P E V++ACT N+ G+ VH ++ G
Sbjct: 176 AYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDK 235
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
+ AL+DMY K G V A ++F +M + +V +W+A+I G +G+ A+EL MK
Sbjct: 236 DVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK 295
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
S + PN T +L AC+ AG + G + M + I + D+ A+ L
Sbjct: 296 YSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGV-GLVDMYAKNHFL 354
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGV 420
+A + + F + I+ AL+S S H ++ + +
Sbjct: 355 DDARK-VFDWMFHRDLILCNALISGCS-HGGRHDEAL 389
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 143/293 (48%), Gaps = 2/293 (0%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HA +G +D + LV + AR + ++ + WN L+ Y
Sbjct: 121 QVHAMAMATGFGSDVFVANALV--AMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYV 178
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+D+ +A+ VF +M GI+PTEF + V+ AC + G QV A V + G D DV+
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVF 238
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
T N LV Y R A +F+ M + VVSWN +I+ CV N A+ ++MK G
Sbjct: 239 TANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSG 298
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
P+ T+ +L AC+ G LG+ +H +I+ + +G L+DMYAK + AR
Sbjct: 299 LVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAR 358
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
+F M ++ +A+I G + G +EAL LF ++ + N T VL
Sbjct: 359 KVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVL 411
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 166/393 (42%), Gaps = 23/393 (5%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HA + G D LV ++ S++ + DS + WN LI G
Sbjct: 223 QVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIA---SVIFEKMPDSDVVSWNALISGCV 279
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ A+ + + MK G+ P FT +LKAC+ + G Q+ + K+ DSD Y
Sbjct: 280 LNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDY 339
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
LV Y DA KVFD M R ++ N +I+ C EA+ F +++ G
Sbjct: 340 IGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEG 399
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+ TT+ VL + L S + VH ++ G + + + LID Y KC + A
Sbjct: 400 LGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDAN 459
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F ++ ++MI L+Q + E A++LF M + P+ +L AC
Sbjct: 460 RVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 519
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL----ARAGHLKEAYTFIMNMPFQPNPIV 401
E G + H H IK + + L A+ G +++A ++P
Sbjct: 520 AYEQGKQV-----HAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP------- 567
Query: 402 LRALLSASSIHDAKYQDGVGNEVRRRLLELEPR 434
R ++S S++ Q G G +R LEL R
Sbjct: 568 ERGVVSWSAMIGGLAQHGHG----KRALELFGR 596
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 115/263 (43%), Gaps = 11/263 (4%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILCNYVNDSVPIPWNNLIR 102
Q+HA G DA ++ L+ C+ S N + + I ++I
Sbjct: 425 QVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEE------CSSGDIIACTSMIT 478
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
+ D A+ +F++M R+G++P F +L ACA +S +G QV A++ K S
Sbjct: 479 ALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMS 538
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
D + N LV Y C DA F + ER VVSW+ +I ++ A+ F +M
Sbjct: 539 DAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMV 598
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER-GTVLNCQLGTALIDMYAKCGAV 281
D G P+ TM VL AC G + K + E G + + +ID+ + G +
Sbjct: 599 DEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKL 658
Query: 282 GCARLLFSRME-EINVWTWSAMI 303
A L + M + N W A++
Sbjct: 659 DDAMELVNSMPFQANASIWGALL 681
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 159/485 (32%), Positives = 254/485 (52%), Gaps = 13/485 (2%)
Query: 35 LKLCC---SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LK C ++K +H+ + G +D + L+ S S L A +
Sbjct: 118 LKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSI--YSGSGRLNDAHKVFEEIPER 175
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
SV + W L GY + + REA+ +F M G++P + VL AC + L+ G +
Sbjct: 176 SV-VTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWI 234
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
++ + + + + LV Y C + A VFD M E+ +V+W+ +I N +
Sbjct: 235 VKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFP 294
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQLGTA 270
E + +F++M +PD+ +++ LS+C LG L LG+W + LI+R L N + A
Sbjct: 295 KEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEW-GISLIDRHEFLTNLFMANA 353
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
LIDMYAKCGA+ +F M+E ++ +A I GLA++G+ + + +F + ISP+
Sbjct: 354 LIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPD 413
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
TFLG+LC C HAG+++DG R+F+ + V+ +K HY M D+ RAG L +AY I
Sbjct: 414 GSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLI 473
Query: 391 MNMPFQPNPIVLRALLSASS-IHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
+MP +PN IV ALLS + D + + V + L+ LEP + N V ++N Y+
Sbjct: 474 CDMPMRPNAIVWGALLSGCRLVKDTQ----LAETVLKELIALEPWNAGNYVQLSNIYSVS 529
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
G W++ + VR M G+KK+ G SW+EL G++H F + S IY LE L M
Sbjct: 530 GRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEM 589
Query: 510 KVLNF 514
+++ F
Sbjct: 590 RLMGF 594
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 166/325 (51%), Gaps = 3/325 (0%)
Query: 26 SKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
SK +Q + + + + HL Q+H + L +D ++ L++ + ++ +L
Sbjct: 11 SKVQQIKTLISVASTFNHLKQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSF---LL 67
Query: 86 CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL 145
++ +N LI G+ + E + +F+ +++ G+ FT+P VLKAC S
Sbjct: 68 FSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNR 127
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
G+ + + V K G + DV +L+ Y R DA KVF+++ ERSVV+W + +
Sbjct: 128 KLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGY 187
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
EA+ F KM ++G PD ++ VLSAC +G+L G+W+ + E N
Sbjct: 188 TTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNS 247
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
+ T L+++YAKCG + AR +F M E ++ TWS MI G A + + +E +E F M
Sbjct: 248 FVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQE 307
Query: 326 SISPNYVTFLGVLCACNHAGMVEDG 350
++ P+ + +G L +C G ++ G
Sbjct: 308 NLKPDQFSIVGFLSSCASLGALDLG 332
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 1/251 (0%)
Query: 143 SGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII 202
S N QV ++ L D + N L++ R+ + +F ++ +N +I
Sbjct: 24 STFNHLKQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLI 83
Query: 203 TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV 262
V N E + F+ ++ G T +VL ACT N LG +H +++ G
Sbjct: 84 NGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFN 143
Query: 263 LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM 322
+ T+L+ +Y+ G + A +F + E +V TW+A+ G G EA++LF M
Sbjct: 144 HDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKM 203
Query: 323 KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGH 382
+ P+ + VL AC H G ++ G ME + K + T+ ++ A+ G
Sbjct: 204 VEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRT-TLVNLYAKCGK 262
Query: 383 LKEAYTFIMNM 393
+++A + +M
Sbjct: 263 MEKARSVFDSM 273
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 155/417 (37%), Positives = 220/417 (52%), Gaps = 3/417 (0%)
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N LI G + R EA+ +F ++++ G+ T VLK+ A + + QV A K
Sbjct: 373 NALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVK 432
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
G D + N L+ Y C DA +VF++ +++ +IT + A+
Sbjct: 433 IGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKL 492
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
F++M G EPD + +L+AC L GK VH LI+R + + G AL+ YAK
Sbjct: 493 FMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAK 552
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CG++ A L FS + E V +WSAMI GLAQHG+ + ALELF M + I+PN++T V
Sbjct: 553 CGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSV 612
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
LCACNHAG+V++ RYF+ M+ + GI HY M D+L RAG L +A + +MPFQ
Sbjct: 613 LCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQA 672
Query: 398 NPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSN 457
N + ALL AS +H +G +L LEP S V++AN YA GMW +V+
Sbjct: 673 NASIWGALLGASRVHK---DPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAK 729
Query: 458 VRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
VR+ MK+ +KK MSW+E+ +H F G S IY L L M F
Sbjct: 730 VRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGF 786
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 168/335 (50%), Gaps = 11/335 (3%)
Query: 91 DSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P P W++L+ Y+ + PR A+ F M+ G+ EF P VLK C + L
Sbjct: 61 DEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVPDARL- 118
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVC 205
G QV A +G SDV+ N LV YG DA +VF++ ER+ VSWN +++
Sbjct: 119 -GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAY 177
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
V+N G+A+ F +M G +P E V++ACT N+ G+ VH ++ G +
Sbjct: 178 VKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDV 237
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
AL+DMY K G V A ++F +M + +V +W+A+I G +G+ A+EL MK S
Sbjct: 238 FTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYS 297
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
+ PN T +L AC+ AG + G + M + I + D+ A+ L +
Sbjct: 298 GLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGV-GLVDMYAKNHFLDD 356
Query: 386 AYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGV 420
A + + F + I+ AL+S S H ++ + +
Sbjct: 357 ARK-VFDWMFHRDLILCNALISGCS-HGGRHDEAL 389
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 143/293 (48%), Gaps = 2/293 (0%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HA +G +D + LV + AR + ++ + WN L+ Y
Sbjct: 121 QVHAMAMATGFGSDVFVANALV--AMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYV 178
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+D+ +A+ VF +M GI+PTEF + V+ AC + G QV A V + G D DV+
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVF 238
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
T N LV Y R A +F+ M + VVSWN +I+ CV N A+ ++MK G
Sbjct: 239 TANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSG 298
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
P+ T+ +L AC+ G LG+ +H +I+ + +G L+DMYAK + AR
Sbjct: 299 LVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAR 358
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
+F M ++ +A+I G + G +EAL LF ++ + N T VL
Sbjct: 359 KVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVL 411
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 166/393 (42%), Gaps = 23/393 (5%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HA + G D LV ++ S++ + DS + WN LI G
Sbjct: 223 QVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIA---SVIFEKMPDSDVVSWNALISGCV 279
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ A+ + + MK G+ P FT +LKAC+ + G Q+ + K+ DSD Y
Sbjct: 280 LNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDY 339
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
LV Y DA KVFD M R ++ N +I+ C EA+ F +++ G
Sbjct: 340 IGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEG 399
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+ TT+ VL + L S + VH ++ G + + + LID Y KC + A
Sbjct: 400 LGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDAN 459
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F ++ ++MI L+Q + E A++LF M + P+ +L AC
Sbjct: 460 RVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 519
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL----ARAGHLKEAYTFIMNMPFQPNPIV 401
E G + H H IK + + L A+ G +++A ++P
Sbjct: 520 AYEQGKQV-----HAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP------- 567
Query: 402 LRALLSASSIHDAKYQDGVGNEVRRRLLELEPR 434
R ++S S++ Q G G +R LEL R
Sbjct: 568 ERGVVSWSAMIGGLAQHGHG----KRALELFGR 596
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 115/263 (43%), Gaps = 11/263 (4%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILCNYVNDSVPIPWNNLIR 102
Q+HA G DA ++ L+ C+ S N + + I ++I
Sbjct: 425 QVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEE------CSSGDIIACTSMIT 478
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
+ D A+ +F++M R+G++P F +L ACA +S +G QV A++ K S
Sbjct: 479 ALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMS 538
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
D + N LV Y C DA F + ER VVSW+ +I ++ A+ F +M
Sbjct: 539 DAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMV 598
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER-GTVLNCQLGTALIDMYAKCGAV 281
D G P+ TM VL AC G + K + E G + + +ID+ + G +
Sbjct: 599 DEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKL 658
Query: 282 GCARLLFSRME-EINVWTWSAMI 303
A L + M + N W A++
Sbjct: 659 DDAMELVNSMPFQANASIWGALL 681
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 7/256 (2%)
Query: 140 AEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWN 199
A L G + A++ KSG S N+L+ FY CRR A + FD++ + VSW+
Sbjct: 15 AAAQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWS 72
Query: 200 VIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER 259
++T N A+ F M+ G +E + VVL + + LG VH +
Sbjct: 73 SLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARLGAQVHAMAMAT 129
Query: 260 GTVLNCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEALEL 318
G + + AL+ MY G + AR +F+ + E N +W+ ++ ++ +A+++
Sbjct: 130 GFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQV 189
Query: 319 FSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILA 378
F M S I P F V+ AC + +E G R H M G + + D+
Sbjct: 190 FGEMVWSGIQPTEFGFSCVVNACTGSRNIEAG-RQVHAMVVRMGYDKDVFTANALVDMYM 248
Query: 379 RAGHLKEAYTFIMNMP 394
+ G + A MP
Sbjct: 249 KMGRVDIASVIFEKMP 264
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 174/514 (33%), Positives = 263/514 (51%), Gaps = 30/514 (5%)
Query: 16 KPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSS 75
KP N LL KA LS +++ +I + G +D + ++ L S
Sbjct: 76 KPDNYTYPLLFKACARLSLIRMGS------EILGHVLHLGFDSDIFVSNAVIHL--LVSC 127
Query: 76 KNLTYARSILCNY-VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPF 134
+L AR + V D V WN++I GY EA+ + +MK GIKP E T
Sbjct: 128 GDLDGARKMFDKSCVRDLVS--WNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIG 185
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
V+ +CA++ L+ G + + ++GL V N L+ Y C A K+FD M ++
Sbjct: 186 VVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKT 245
Query: 195 VVSWNVII-------TVCVENLWLG---------EAVGYFVKMKDLGFEPDETTMLVVLS 238
+VSW ++ V N +G EA+ F +M+ + PDE TM+ LS
Sbjct: 246 MVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLS 305
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
AC++LG L +G W+H + + LN LGTALIDMYAKCG + A +F + N T
Sbjct: 306 ACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLT 365
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
W+A+I GLA HG A A+ FS M ++S+ P+ VTFLG+L AC H G+VE+G +YF +M
Sbjct: 366 WTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMS 425
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD 418
+ P HY M D+L RAG L+EA I +MP + + +V AL A IH
Sbjct: 426 SKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVL-- 483
Query: 419 GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVEL 478
+G +LL+++P S V++AN Y E MW++ R+ M+ G++K G S +E+
Sbjct: 484 -MGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRKLMRQRGVEKTPGCSSIEV 542
Query: 479 GGSIHRFYSGYDSQVELAGIYQILETLNLHMKVL 512
G ++ F S + IY+ L L ++++
Sbjct: 543 NGIVYEFIVRDKSHPQSEQIYECLIQLTRQLELV 576
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 125/377 (33%), Positives = 196/377 (51%), Gaps = 20/377 (5%)
Query: 53 VSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPRE 112
++GL D L+ FC +S ++L Y +IL N N + WN IRG+ S+ PRE
Sbjct: 3 LTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNT-FSWNVAIRGFLDSENPRE 61
Query: 113 AVWVFID-MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLV 171
AV ++ ++ G KP +TYP + KACA +S + G ++ +V G DSD++ +N ++
Sbjct: 62 AVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVI 121
Query: 172 RFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDET 231
SC A K+FD C R +VSWN +I V W EA+ ++ +MK G +PDE
Sbjct: 122 HLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEV 181
Query: 232 TMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR------ 285
TM+ V+S+C +L +L LG+ H + E G L L AL+DMY KCG + AR
Sbjct: 182 TMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSM 241
Query: 286 ----------LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFL 335
+LF M + +V W+AMI G +EAL LF+ M+ +I+P+ VT +
Sbjct: 242 TNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMV 301
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPF 395
L AC+ G ++ G H +E H + + D+ A+ G + +A +P
Sbjct: 302 SCLSACSQLGALDVGIWIHHYIEK-HELSLNVALGTALIDMYAKCGKITKAIQVFQELPG 360
Query: 396 QPNPIVLRALLSASSIH 412
+ N + A++S ++H
Sbjct: 361 R-NSLTWTAIISGLALH 376
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 161/443 (36%), Positives = 232/443 (52%), Gaps = 12/443 (2%)
Query: 80 YARSIL---CNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
YAR L V D +P P W LI Y + REAV V + G++P FT
Sbjct: 163 YARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTA 222
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
VL ACA ++ L G V + G+ V+ V Y C A +VFD M +
Sbjct: 223 VRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRD 282
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
+ V+W ++ N EA+ F+ M+ G PD + LSACT LG L LG+
Sbjct: 283 KDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQA 342
Query: 253 HLQLIERGTVL-NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+++++ L N LGTALIDMYAKCG+ A ++F +M + ++ W+AMILGL G+
Sbjct: 343 -IRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGH 401
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
+ A L M+ S + N TF+G+LC+C H G+++DG RYFH M ++ I P HY
Sbjct: 402 EKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYG 461
Query: 372 TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLEL 431
+ D+L+RAG L+EA+ I +MP N ++L ALL IH + V +L+ L
Sbjct: 462 CIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIH---RNAELAEHVLTQLIRL 518
Query: 432 EPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDS 491
EP S N V+++N Y+ G WE + +R MK G++K+ SWVE G +H F G S
Sbjct: 519 EPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKS 578
Query: 492 QVELAGIYQILETLNLHMKVLNF 514
IY+ L+ L L MK + +
Sbjct: 579 HPLSDQIYKKLDELGLEMKTMGY 601
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 111/225 (49%), Gaps = 1/225 (0%)
Query: 127 PTEFTYPFVLKACAEIS-GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACK 185
P+ T+P LK+ + + L G Q+ A K ++ + +L+ Y C A +
Sbjct: 115 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 174
Query: 186 VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGN 245
VFD+M S VSW +IT ++ L EAV G PD T + VL+AC + +
Sbjct: 175 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 234
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
L+ G+ V + G + + TA +D+Y KCG + AR +F +M + + W AM+ G
Sbjct: 235 LATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGG 294
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
A +G+ EAL+LF M+ + P+ G L AC G ++ G
Sbjct: 295 YASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLG 339
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 2/160 (1%)
Query: 228 PDETTMLVVLSACTELGN-LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
P T + L + + L + L G+ +H + ++ + N + T+L+ +YA+CG + A+
Sbjct: 115 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 174
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
+F M + +W+A+I G EA+ + N + + P+ T + VL AC
Sbjct: 175 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 234
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+ G + E GI D+ + G + +A
Sbjct: 235 LATGETVWRAAEQ-EGIAQSVFVATAAVDLYVKCGEMAKA 273
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 161/473 (34%), Positives = 254/473 (53%), Gaps = 10/473 (2%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+IH ++ SG D + LV L A+ + +V + WN++I GY+
Sbjct: 228 EIHMELVRSGFALDGFVSSALVDM--YGKCGCLEMAKEVFEQIQRKNV-VSWNSMIAGYS 284
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ + +F M GI+PT T +L AC+ L G + + ++ +++D++
Sbjct: 285 LKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIF 344
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N++L+ Y C A VF +M + +VVSWNV+I+ V+ EA+ F M+ G
Sbjct: 345 VNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAG 404
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+PD T VL AC++L L GK +H +IE +N + AL+DMYAKCGAV A
Sbjct: 405 VKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEAL 464
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F+++ E + +W++MI HG A EAL+LF M+ S P+ VTFL +L AC+HAG
Sbjct: 465 HIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAG 524
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP-FQPNPIVLRA 404
+V++G YF++M +G KP HY + D+L R G L+EAY + P + + +L
Sbjct: 525 LVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLST 584
Query: 405 LLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKN 464
L SA +H + +G ++ R L+E +P +I++N YA V W++V VR +K
Sbjct: 585 LFSACHLHK---KLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKE 641
Query: 465 VGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM---KVLNF 514
+GLKK G SW+E+G IH F S + IY+ + L H+ +VL+F
Sbjct: 642 LGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEKYQVLSF 694
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 190/373 (50%), Gaps = 15/373 (4%)
Query: 30 QCLSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARS 83
+ LS LK C K+L Q IH +I GLQN+ + K L+ C L S L +
Sbjct: 5 KLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF--- 61
Query: 84 ILCNYVNDSVPIP-WNNLIRGYAWSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAE 141
+ + + I WN L+ + E + VF + +KP FTYP VLKAC+
Sbjct: 62 ---QTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSG 118
Query: 142 ISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVI 201
+ + G V +V KSG DV ++ V Y C DA K+FD+M ER V SWN +
Sbjct: 119 LGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNV 178
Query: 202 ITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGT 261
I+ ++ +A+ F +MK GF+PD T+ V+S+C L +L GK +H++L+ G
Sbjct: 179 ISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGF 238
Query: 262 VLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSN 321
L+ + +AL+DMY KCG + A+ +F +++ NV +W++MI G + G ++ +ELF
Sbjct: 239 ALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRR 298
Query: 322 MKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAG 381
M I P T +L AC+ + ++ G ++ H + ++ ++ D+ + G
Sbjct: 299 MDEEGIRPTLTTLSSILMACSRSVNLQLG-KFIHGYIIRNRVEADIFVNSSLIDLYFKCG 357
Query: 382 HLKEAYTFIMNMP 394
++ A NMP
Sbjct: 358 NIGSAENVFQNMP 370
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 161/443 (36%), Positives = 232/443 (52%), Gaps = 12/443 (2%)
Query: 80 YARSIL---CNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
YAR L V D +P P W LI Y + REAV V + G++P FT
Sbjct: 116 YARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTA 175
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
VL ACA ++ L G V + G+ V+ V Y C A +VFD M +
Sbjct: 176 VRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRD 235
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
+ V+W ++ N EA+ F+ M+ G PD + LSACT LG L LG+
Sbjct: 236 KDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQA 295
Query: 253 HLQLIERGTVL-NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+++++ L N LGTALIDMYAKCG+ A ++F +M + ++ W+AMILGL G+
Sbjct: 296 -IRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGH 354
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
+ A L M+ S + N TF+G+LC+C H G+++DG RYFH M ++ I P HY
Sbjct: 355 EKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYG 414
Query: 372 TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLEL 431
+ D+L+RAG L+EA+ I +MP N ++L ALL IH + V +L+ L
Sbjct: 415 CIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIH---RNAELAEHVLTQLIRL 471
Query: 432 EPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDS 491
EP S N V+++N Y+ G WE + +R MK G++K+ SWVE G +H F G S
Sbjct: 472 EPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKS 531
Query: 492 QVELAGIYQILETLNLHMKVLNF 514
IY+ L+ L L MK + +
Sbjct: 532 HPLSDQIYKKLDELGLEMKTMGY 554
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 111/225 (49%), Gaps = 1/225 (0%)
Query: 127 PTEFTYPFVLKACAEIS-GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACK 185
P+ T+P LK+ + + L G Q+ A K ++ + +L+ Y C A +
Sbjct: 68 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 127
Query: 186 VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGN 245
VFD+M S VSW +IT ++ L EAV G PD T + VL+AC + +
Sbjct: 128 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 187
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
L+ G+ V + G + + TA +D+Y KCG + AR +F +M + + W AM+ G
Sbjct: 188 LATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGG 247
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
A +G+ EAL+LF M+ + P+ G L AC G ++ G
Sbjct: 248 YASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLG 292
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 72/167 (43%), Gaps = 2/167 (1%)
Query: 228 PDETTMLVVLSACTELGN-LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
P T + L + + L + L G+ +H + ++ + N + T+L+ +YA+CG + A+
Sbjct: 68 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 127
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
+F M + +W+A+I G EA+ + N + + P+ T + VL AC
Sbjct: 128 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 187
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
+ G + E GI D+ + G + +A M
Sbjct: 188 LATGETVWRAAEQ-EGIAQSVFVATAAVDLYVKCGEMAKAREVFDKM 233
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/418 (34%), Positives = 225/418 (53%), Gaps = 7/418 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I + ++ + + +F+ M R ++P +FTY V+KACA LN G ++
Sbjct: 407 VSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGR 466
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ KSG+ D + + LV YG C +A K+ + E++ VSWN II+ A
Sbjct: 467 IIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENA 526
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
YF +M ++G PD T VL C + + LGK +H Q+++ + + + L+DM
Sbjct: 527 QRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDM 586
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG + +RL+F + + + TWSAMI A HG E+A+ LF M+ ++ PN+ F
Sbjct: 587 YSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIF 646
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ VL AC H G V+ G YF +M +G+ P HY M D+L R+G + EA I +MP
Sbjct: 647 ISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMP 706
Query: 395 FQPNPIVLRALLSASSIHDAKYQDG--VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMW 452
F+ + ++ R LLS + K Q V + LL+L+P+ S V++AN YA VGMW
Sbjct: 707 FEADDVIWRTLLS-----NCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMW 761
Query: 453 EKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+V+ +R MKN LKK G SW+E+ +H F G + IY+ L MK
Sbjct: 762 GEVAKMRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMK 819
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 167/334 (50%), Gaps = 18/334 (5%)
Query: 89 VNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V +++P P +N +I GYA D+ +A+ +F ++R + E + L AC+ I
Sbjct: 296 VFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKR 355
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
EG+Q+ K GL ++ N ++ YG C +AC +F++M R VSWN II
Sbjct: 356 HLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAA 415
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
+N + + + FV M EPD+ T V+ AC L+ G +H ++I+ G L+
Sbjct: 416 HEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLD 475
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+G+AL+DMY KCG + A + +R+EE +W+++I G + +E A FS M
Sbjct: 476 WFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLE 535
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG-IKPMRIHYH-----TMADILA 378
I P+ T+ VL C + +E G + +H I +++H T+ D+ +
Sbjct: 536 MGIIPDNYTYATVLDVCANMATIELG-------KQIHAQILKLQLHSDVYIASTLVDMYS 588
Query: 379 RAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
+ G+++++ P + + + A++ A + H
Sbjct: 589 KCGNMQDSRLMFEKAP-KRDYVTWSAMICAYAYH 621
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 142/270 (52%), Gaps = 9/270 (3%)
Query: 77 NLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
N+ +A+S+ DS+P + WN+L+ Y + R+++ +F+ M+ I T+
Sbjct: 87 NMGFAQSLF-----DSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATF 141
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
+LKAC+ I G+QV + G ++DV T + LV Y C++ DA +VF +M E
Sbjct: 142 AVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPE 201
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
R++V W+ +I V+N E + F M +G ++T V +C L LG +
Sbjct: 202 RNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQL 261
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H ++ + +GTA +DMYAKC + A +F+ + +++A+I+G A+
Sbjct: 262 HGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQG 321
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACN 342
+AL++F +++ +++ + ++ G L AC+
Sbjct: 322 LKALDIFQSLQRNNLGFDEISLSGALTACS 351
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 135/309 (43%), Gaps = 41/309 (13%)
Query: 125 IKPTE-FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDA 183
+ PT+ T+ +L+ C+ + LN G QV + +G +Y N L++FY + A
Sbjct: 1 MNPTKKLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYA 60
Query: 184 CKVFDDMCERSVVSWNVII--TVCVENLWLGE---------------------------- 213
KVFD M +R V+SWN +I + N+ +
Sbjct: 61 FKVFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNR 120
Query: 214 -AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
++ FV+M+ L D T V+L AC+ + + LG VH I+ G + G+AL+
Sbjct: 121 KSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALV 180
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
DMY+KC + A +F M E N+ WSA+I G Q+ E L+LF +M + +
Sbjct: 181 DMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQS 240
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMA----DILARAGHLKEAYT 388
T+ V +C + G + H H +K + + D+ A+ + +A+
Sbjct: 241 TYASVFRSCAGLSAFKLGTQL-----HGHALKSDFAYDSIIGTATLDMYAKCERMFDAWK 295
Query: 389 FIMNMPFQP 397
+P P
Sbjct: 296 VFNTLPNPP 304
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 132/298 (44%), Gaps = 14/298 (4%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILC 86
S +K C ++ L +IH +I SG+ D + LV C + +AR
Sbjct: 446 SVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHAR---- 501
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
+ + + WN++I G++ + A F M GI P +TY VL CA ++ +
Sbjct: 502 --LEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIE 559
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G Q+ A + K L SDVY + LV Y C +D+ +F+ +R V+W+ +I
Sbjct: 560 LGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYA 619
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG-KWVHLQLIERGTVLNC 265
+ +A+ F +M+ L +P+ T + VL AC +G + G + L G
Sbjct: 620 YHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQM 679
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEALELFSNM 322
+ + ++D+ + G V A L M E + W ++ G E A + F+++
Sbjct: 680 EHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSL 737
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 163/483 (33%), Positives = 252/483 (52%), Gaps = 19/483 (3%)
Query: 43 HLYQIHAQIQVSGLQNDAQILKELVRFCTL----SSSKNLTYARSILCNYVNDSVPI--- 95
++Y + ++ + L D +++ V F L +S L AR + D +P+
Sbjct: 171 NMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELF-----DEIPVRDV 225
Query: 96 -PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI-SGLNEGMQVQA 153
WN +I GYA S R EA+ F +M+R + P T VL ACA+ S L G V++
Sbjct: 226 VSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRS 285
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+ GL S++ N L+ Y C +A +F+ + +++VVSWNV+I E
Sbjct: 286 WIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKE 345
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL--NCQLGTAL 271
A+G F +M +P++ T L +L AC LG L LGKWVH + + + L T+L
Sbjct: 346 ALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSL 405
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
IDMYAKCG + A+ +F M ++ TW+AMI G A HG+ + AL LFS M + P+
Sbjct: 406 IDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDD 465
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
+TF+GVL AC HAG++ G RYF M + + P HY M D+ RAG EA T +
Sbjct: 466 ITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVK 525
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGM 451
NM +P+ + +LL A IH + + V + L ELEP V+++N YA G
Sbjct: 526 NMEMKPDGAIWCSLLGACRIH---RRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGR 582
Query: 452 WEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
WE V+ +R + + +KK+ G S +E+ +H F G + IY++L+ +++ ++
Sbjct: 583 WEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEK 642
Query: 512 LNF 514
F
Sbjct: 643 AGF 645
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 130/389 (33%), Positives = 207/389 (53%), Gaps = 36/389 (9%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
L+ L C + + L QIH+QI +GL N L +L+ FC +S +L+YA S+ N
Sbjct: 32 LTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNP 91
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
+ I WN++IRG + S+ P A+ ++ M G +P E+T+P + K+C +I G +EG QV
Sbjct: 92 NHVI-WNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQV 150
Query: 152 QANVTKSGLDSDVYTNNNLVRFYG------------SCRRKRDAC--------------- 184
A+V K GL+ + + + +L+ Y RDA
Sbjct: 151 HAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFL 210
Query: 185 ----KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
++FD++ R VVSWN +I+ ++ + EA+ +F +M+ P+ +TML VLSAC
Sbjct: 211 DEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSAC 270
Query: 241 TELG-NLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
+ G +L LG WV + +RG N +L LIDMY KCG + A LF ++++ NV +W
Sbjct: 271 AQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSW 330
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM-- 357
+ MI G +EAL LF M S+I PN VTFL +L AC + G ++ G ++ H
Sbjct: 331 NVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLG-KWVHAYVD 389
Query: 358 EHVHGIKPMRIHYHTMADILARAGHLKEA 386
+++ +K + ++ D+ A+ G L A
Sbjct: 390 KNMKSMKNTVALWTSLIDMYAKCGDLAVA 418
>gi|222623259|gb|EEE57391.1| hypothetical protein OsJ_07563 [Oryza sativa Japonica Group]
Length = 748
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 174/522 (33%), Positives = 259/522 (49%), Gaps = 52/522 (9%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
++ L C + HL Q+HA V+G L+RF +L S L YAR + D
Sbjct: 232 VAALHRCATLAHLKQLHAHAVVTGRAAAQTTTFHLLRFASLRLS-CLPYARRLF-----D 285
Query: 92 SVPIP---------WNNLIRGYAWSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAE 141
+ P P + R+++ +F+ M RRG P +F YP VL+A
Sbjct: 286 ATPSPNVFLYSAMLSAYAAASSHSQEHARDSLALFLRMLRRGRPAPNQFVYPLVLRAACA 345
Query: 142 ISGLNEGMQVQANVTKSGL-------------------------------DSDVYTNNNL 170
I G+ + + K G D +V + L
Sbjct: 346 I-GVQLVRSIHCHACKDGFYGHDFIRTSLLDGYSRYGMMGDARKLFDGLTDRNVVSWTAL 404
Query: 171 VRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDE 230
V Y + DA +F+ M +R V +WN II C +N EAVG F +M D GF P+
Sbjct: 405 VSGYARAGKVGDAIVLFERMPQRDVPAWNAIIAGCTQNGLFVEAVGIFRRMVDEGFRPNG 464
Query: 231 TTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSR 290
TT+ +LSAC LG L +GK +H + LIDMY KCG + A+ +F
Sbjct: 465 TTVSCLLSACGHLGMLKIGKVIHGYAWRSCVGFGSSVVNGLIDMYGKCGNLMEAKWIFDA 524
Query: 291 MEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
+ + TW+++I LA HG +E A+ +F++M+N + P+ VTF+G+L AC H G V++G
Sbjct: 525 FSDRGLTTWNSLINCLALHGCSESAIAVFNSMRNEGVQPDEVTFVGLLNACTHGGFVDEG 584
Query: 351 YRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASS 410
RYF M HGI+P HY + D+L RAG ++A FI +M QP+ ++ +LL+A
Sbjct: 585 LRYFELMCDEHGIEPEIEHYGCVVDLLCRAGRFQDAMNFINDMKVQPDEVIWGSLLNACR 644
Query: 411 IHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMK-NVGLKK 469
IH ++ + + R LL+L P + +V++AN Y+E G WE+V VR+ MK +V KK
Sbjct: 645 IH--RHLE-LAEHAIRNLLDLNPSNANYVVMLANLYSEGGFWEEVRKVRKLMKEDVTGKK 701
Query: 470 MKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
+ G SW+E+ RFYSG D E IY L+ L M++
Sbjct: 702 LPGCSWIEVDRKTRRFYSGDDGHPESEDIYDTLDKLATTMEM 743
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 121/271 (44%), Gaps = 23/271 (8%)
Query: 122 RRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYG---SCR 178
RR P + L CA ++ L Q+ A+ +G + T +L+RF SC
Sbjct: 221 RRHRSPPTADFVAALHRCATLAHLK---QLHAHAVVTGRAAAQTTTFHLLRFASLRLSCL 277
Query: 179 RKRDACKVFDDMCERSVVSWNVIITVCVENLWLG-----EAVGYFVKMKDLGFE-PDETT 232
A ++FD +V ++ +++ +++ F++M G P++
Sbjct: 278 PY--ARRLFDATPSPNVFLYSAMLSAYAAASSHSQEHARDSLALFLRMLRRGRPAPNQFV 335
Query: 233 MLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME 292
+VL A +G + L + +H + G + + T+L+D Y++ G +G AR LF +
Sbjct: 336 YPLVLRAACAIG-VQLVRSIHCHACKDGFYGHDFIRTSLLDGYSRYGMMGDARKLFDGLT 394
Query: 293 EINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR 352
+ NV +W+A++ G A+ G +A+ LF M + + ++ C G+ +
Sbjct: 395 DRNVVSWTALVSGYARAGKVGDAIVLFERMPQRDVP----AWNAIIAGCTQNGLFVEAVG 450
Query: 353 YFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
F M G +P + T++ +L+ GHL
Sbjct: 451 IFRRMVD-EGFRP---NGTTVSCLLSACGHL 477
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/421 (34%), Positives = 232/421 (55%), Gaps = 5/421 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I ++ + + +M R G++P +FTY VLKACA + L G V
Sbjct: 405 VSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGK 464
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
KSGL D + ++ +V Y C +A K+ D + + +VSWN II+ N EA
Sbjct: 465 AIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEA 524
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+F +M D+G +PD T VL C L + LGK +H Q+I++ + + + + L+DM
Sbjct: 525 QKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDM 584
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG + + L+F + ++++ +W+AMI G A HG EALE+F M+ +++ PN+ TF
Sbjct: 585 YAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATF 644
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ VL AC+H G+++DG RYF+ M + ++P H+ M DIL R+ +EA FI +MP
Sbjct: 645 VAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMP 704
Query: 395 FQPNPIVLRALLSASSIHDAKYQD-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
+ + ++ + LLS I QD V +L L+P S ++++N YAE G W
Sbjct: 705 LEADAVIWKTLLSICKIR----QDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWV 760
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLN 513
VS RR M+ LKK G SW+E+ +H F +G +Y++L L + MK+
Sbjct: 761 DVSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLAGDKVHPRSREVYEMLNNLIVEMKLSG 820
Query: 514 F 514
+
Sbjct: 821 Y 821
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 168/354 (47%), Gaps = 5/354 (1%)
Query: 79 TYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKA 138
T A + L + D + WN L+ GY R++V + ++M RRG+ P T +LKA
Sbjct: 86 TGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKA 145
Query: 139 CAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSW 198
C + L G+Q+ A K+GL+ DV + LV YG CR DA + F M ER+ VSW
Sbjct: 146 CGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSW 205
Query: 199 NVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
I CV+N + FV+M+ LG + V +C + LS + +H I+
Sbjct: 206 GAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIK 265
Query: 259 RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALEL 318
+ +GTA++D+YAK ++ AR F + V +AM++GL + G EAL+L
Sbjct: 266 NKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQL 325
Query: 319 FSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILA 378
F M S I + V+ GV AC G + H + G + + D+
Sbjct: 326 FQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQ-VHCLAIKSGFDVDVCVRNAILDLYG 384
Query: 379 RAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVG--NEVRRRLLE 430
+ L EAY M Q + + A+++A ++ Y+D + NE+ R +E
Sbjct: 385 KCKALVEAYLVFQEME-QRDSVSWNAIIAALEQNEC-YEDTIAYLNEMLRYGME 436
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 172/358 (48%), Gaps = 8/358 (2%)
Query: 29 RQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
R C + L ++ Q+HA + D + +V + + +L AR +
Sbjct: 245 RSCAAITCLSTAR----QLHAHAIKNKFSADRVVGTAIVD--VYAKADSLVDARRAFFSL 298
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
N +V N ++ G + EA+ +F M R GI + V ACAE+ G +G
Sbjct: 299 PNHTVQ-ACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQG 357
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
+QV KSG D DV N ++ YG C+ +A VF +M +R VSWN II +N
Sbjct: 358 LQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQN 417
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+ + Y +M G EPD+ T VL AC L +L G VH + I+ G L+ +
Sbjct: 418 ECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVS 477
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
+ ++DMY KCG + A+ L R+ + +W+++I G + + +EEA + FS M + +
Sbjct: 478 STVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVK 537
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
P++ T+ VL C + +E G + ++ + I T+ D+ A+ G++ ++
Sbjct: 538 PDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYIS-STLVDMYAKCGNMPDS 594
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 126/301 (41%), Gaps = 42/301 (13%)
Query: 130 FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD 189
F++ + L A A S L G A + SG + +N L++ Y C A VFD
Sbjct: 5 FSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDV 64
Query: 190 MCERSVVSWNVIITV--------------------------------CVENLWLGEAVGY 217
M R VSWN ++T C ++ ++VG
Sbjct: 65 MPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFR-DSVGL 123
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
V+M G PD TT+ V+L AC L +L+LG +H ++ G ++ + G+AL+DMY K
Sbjct: 124 SVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGK 183
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
C ++ A F M E N +W A I G Q+ LELF M+ + + + V
Sbjct: 184 CRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASV 243
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIK----PMRIHYHTMADILARAGHLKEAYTFIMNM 393
+C + + H H IK R+ + D+ A+A L +A ++
Sbjct: 244 FRSCAAITCLSTARQL-----HAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSL 298
Query: 394 P 394
P
Sbjct: 299 P 299
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 155/356 (43%), Gaps = 7/356 (1%)
Query: 34 FLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
LK C + L QIHA +GL+ D + LV ++L A + +
Sbjct: 142 LLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDM--YGKCRSLEDALRFF-HGMG 198
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
+ + W I G +++ + +F+ M+R G+ ++ Y V ++CA I+ L+ Q
Sbjct: 199 ERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQ 258
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+ A+ K+ +D +V Y DA + F + +V + N ++ V
Sbjct: 259 LHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGL 318
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
EA+ F M G D ++ V SAC E+ G VH I+ G ++ + A
Sbjct: 319 GAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNA 378
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
++D+Y KC A+ A L+F ME+ + +W+A+I L Q+ E+ + + M + P+
Sbjct: 379 ILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPD 438
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
T+ VL AC +E G H G+ T+ D+ + G + EA
Sbjct: 439 DFTYGSVLKACAGLQSLEYG-SVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEA 493
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 158/431 (36%), Positives = 230/431 (53%), Gaps = 9/431 (2%)
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D +P +PW LI Y + REAV V + G++P FT VL ACA I+
Sbjct: 583 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 642
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L G V + G+ V+ V Y C A +VFD M + V+W ++
Sbjct: 643 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 702
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL- 263
N EA+ F+ M+ G +PD + LSACT LG L LG+ +++++ L
Sbjct: 703 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQA-IRMVDWDEFLD 761
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
N LGTALIDMYAKCG+ A ++F +M + ++ W+AMILGL G+ + A L M+
Sbjct: 762 NPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQME 821
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
S + N TF+G+LC+C H G+++DG RYFH M ++ I P HY M D+L+RAG L
Sbjct: 822 KSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLL 881
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
+EA+ + +MP N ++L ALL IH + V ++L+ LEP S N V+++
Sbjct: 882 QEAHQLVDDMPMPANAVILGALLGGCKIH---RNTELAEHVLKQLILLEPWNSGNYVMLS 938
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N Y+ G WE + +R MK G++K+ SWVE G +H F G S IY+ L+
Sbjct: 939 NIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLD 998
Query: 504 TLNLHMKVLNF 514
L L MK + +
Sbjct: 999 ELGLEMKTMGY 1009
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 108/225 (48%), Gaps = 1/225 (0%)
Query: 127 PTEFTYPFVLKACAEIS-GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACK 185
P+ T P LK+ + + L G Q+ A K ++ + +L+ Y C A +
Sbjct: 523 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 582
Query: 186 VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGN 245
VFD+M S V W +IT ++ L EAV G PD T + VL+AC + +
Sbjct: 583 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 642
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
L+ G+ V + G + + TA +D+Y KCG + AR +F +M + W AM+ G
Sbjct: 643 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 702
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
A +G+ EAL+LF M+ + P+ G L AC G ++ G
Sbjct: 703 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLG 747
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 2/160 (1%)
Query: 228 PDETTMLVVLSACTELGN-LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
P T+ + L + + L + L G+ +H + ++ + N + T+L+ +YAKCG + A+
Sbjct: 523 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 582
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
+F M + W+A+I G EA+ + N + + P+ T + VL AC
Sbjct: 583 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 642
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+ G + E G+ D+ + G + +A
Sbjct: 643 LATGETVWRAAEQ-EGVAQSVFVATAAVDLYVKCGEMAKA 681
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 162/489 (33%), Positives = 254/489 (51%), Gaps = 12/489 (2%)
Query: 31 CLSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
C + LK C L + IHA + S ++D + L+ + +L YAR +
Sbjct: 18 CHTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNL--YAKCGDLVYARKLFDE 75
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN- 146
+ V + W LI GY+ DRP++A+ + +M R G+KP +FT +LKA + + +
Sbjct: 76 MSSRDV-VTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDV 134
Query: 147 -EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
+G Q+ + G DS+VY + ++ Y C +A +FD M ++ VSWN +I
Sbjct: 135 LQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGY 194
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
+A F M +P T VL AC +G+L GKWVH +I+ G L
Sbjct: 195 ARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVA 254
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
+G L+DMYAK G++ A+ +F R+ + +V +W++M+ G +QHG + AL+ F M +
Sbjct: 255 FVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRT 314
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
I+PN +TFL VL AC+HAG++++G YF +M + ++P HY TM D+L RAGHL
Sbjct: 315 RIAPNDITFLCVLTACSHAGLLDEGRHYF-DMMKKYNVEPQISHYVTMVDLLGRAGHLDR 373
Query: 386 AYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANK 445
A FI MP +P V ALL A +H G E + EL+ V++ N
Sbjct: 374 AIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAEC---IFELDSHYPGTHVLLYNI 430
Query: 446 YAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
YA G W + VR+ MK G+KK SWVE+ +H F + D+ + I+ + E +
Sbjct: 431 YALAGRWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQI 490
Query: 506 NLHMKVLNF 514
+ +K + +
Sbjct: 491 SDKIKEIGY 499
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 154/443 (34%), Positives = 241/443 (54%), Gaps = 5/443 (1%)
Query: 73 SSSKNLTYARSIL-CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFT 131
S +L ARSI +++ PWN +I GY S +A+ +F M + I +T
Sbjct: 318 SKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYT 377
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSD-VYTNNNLVRFYGSCRRKRDACKVFDDM 190
Y V A A + L+ G +V A KSGL+ + V +N + Y C D KVF+ M
Sbjct: 378 YCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRM 437
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
+R ++SW ++T + +A+ F M+ G P++ T VL +C L L G+
Sbjct: 438 EDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQ 497
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
VH + + G ++ + +AL+DMYAKCG +G A+ +F+R+ + +W+A+I G AQHG
Sbjct: 498 QVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHG 557
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
++AL+LF M + PN VTFL VL AC+H G+VE+G +YF M+ +G+ P HY
Sbjct: 558 IVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHY 617
Query: 371 HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLE 430
+ D+L+R GHL +A FI MP +PN +V + LL A +H +G +++L
Sbjct: 618 ACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHG---NVELGELAAQKILS 674
Query: 431 LEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYD 490
+ S V+++N Y E G ++ ++R MK G+KK G SW+ + G++H+FY+G
Sbjct: 675 FKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVNGTLHKFYAGDQ 734
Query: 491 SQVELAGIYQILETLNLHMKVLN 513
E IY LE L L + L+
Sbjct: 735 QHPEKDKIYAKLEELKLKLISLD 757
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 140/288 (48%), Gaps = 8/288 (2%)
Query: 96 PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANV 155
W LI G A + + F +M+ +GI P +F Y +L+ C + + G V A +
Sbjct: 138 SWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQI 197
Query: 156 TKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
G S + + L+ Y + D+ KVF+ M E +VVSWN +IT N +A
Sbjct: 198 VIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAF 257
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY 275
F++M G PD T + V A L +++ K V +E G N +GTALIDM
Sbjct: 258 DLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMN 317
Query: 276 AKCGAVGCARLLFSRMEEINVWT--WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
+KCG++ AR +F+ + W+AMI G + G+ E+ALELF+ M + I ++ T
Sbjct: 318 SKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYT 377
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKP-MRIHYHTMADILARA 380
+ V A + G + H IK + ++Y ++++ +A A
Sbjct: 378 YCSVFNAIAALKCLSLGKKV-----HARAIKSGLEVNYVSISNAVANA 420
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 130/269 (48%), Gaps = 16/269 (5%)
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDS--DVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
+L+ C + L + V + KS + + N++ Y C AC++FD M +
Sbjct: 74 LLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQ 133
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
R+ SW V+I EN + +F +M+ G PD+ +L C L ++ LG V
Sbjct: 134 RNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMV 193
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H Q++ RG + + TAL++MYAK + + +F+ M E+NV +W+AMI G +
Sbjct: 194 HAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLY 253
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR------YFHEMEHVHGIKPM 366
+A +LF M ++P+ TF+GV A GM+ D + Y E+ G+
Sbjct: 254 LDAFDLFLRMMGEGVTPDAQTFIGVAKAI---GMLRDVNKAKEVSGYALEL----GVDSN 306
Query: 367 RIHYHTMADILARAGHLKEAYTFIMNMPF 395
+ + D+ ++ G L+EA + I N F
Sbjct: 307 TLVGTALIDMNSKCGSLQEARS-IFNSHF 334
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 2/139 (1%)
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KC + A LF +M + N ++W+ +I GLA++G + E F M++ I P+ +
Sbjct: 115 YSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAY 174
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
G+L C +E G H + G + ++ A+ ++++Y + N
Sbjct: 175 SGILQICIGLDSIELG-NMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYK-VFNTM 232
Query: 395 FQPNPIVLRALLSASSIHD 413
+ N + A+++ + +D
Sbjct: 233 TEVNVVSWNAMITGFTSND 251
>gi|42567862|ref|NP_197034.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635759|sp|Q9LXF2.2|PP385_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g15300
gi|332004762|gb|AED92145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 166/511 (32%), Positives = 268/511 (52%), Gaps = 80/511 (15%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP- 96
C + + L QIHA + V+GL ++ ++ EL+ +LS L YA + D +P P
Sbjct: 22 CKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLF-----DEIPKPD 76
Query: 97 ---WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
N+++RG A S +P + V ++ +M++RG+ P +T+ FVLKAC+++ + G
Sbjct: 77 VSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHG 136
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSC------------------------------RRKRD- 182
V + G + Y N L+ F+ +C R K D
Sbjct: 137 KVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDE 196
Query: 183 ACKVFDDMCERSVVSWNVIITVCVE----------------------NLWLG-------- 212
A ++FD+M + V+WNV+IT C++ N +
Sbjct: 197 AMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYP 256
Query: 213 -EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-----LNCQ 266
EA+G F +M+D G PD T+L +LSAC LG+L GK +H+ ++E +V +
Sbjct: 257 KEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTP 316
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+ ALIDMYAKCG++ A +F +++ ++ TW+ +I+GLA H +AE ++E+F M+
Sbjct: 317 IWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLK 375
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+ PN VTF+GV+ AC+H+G V++G +YF M ++ I+P HY M D+L RAG L+EA
Sbjct: 376 VWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEA 435
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKY 446
+ F+ +M +PN IV R LL A I+ NE +LL + S + V+++N Y
Sbjct: 436 FMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANE---KLLSMRKDESGDYVLLSNIY 492
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVE 477
A G W+ V VR+ + +KK G+S +E
Sbjct: 493 ASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 126/292 (43%), Gaps = 19/292 (6%)
Query: 126 KPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRK---RD 182
+ T P + + C I L Q+ A++ +GL S++ L+ + S +
Sbjct: 9 RTTNRRRPKLWQNCKNIRTLK---QIHASMVVNGLMSNLSVVGELI-YSASLSVPGALKY 64
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
A K+FD++ + V N ++ +++ + V + +M+ G PD T VL AC++
Sbjct: 65 AHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSK 124
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
L S G H +++ G VLN + ALI +A CG +G A LF + + WS+M
Sbjct: 125 LEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSM 184
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
G A+ G +EA+ LF M V G L C + + F E + V
Sbjct: 185 TSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCL-KCKEMDSARELFDRFTEKDVV-- 241
Query: 363 IKPMRIHYHTMADILARAGHLKEAYTFIMNM---PFQPNPIVLRALLSASSI 411
++ M G+ KEA M P+ + + +LLSA ++
Sbjct: 242 ------TWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAV 287
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 237/413 (57%), Gaps = 3/413 (0%)
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
+ D WN LI G+A + PR+A+ + M G +P FT +L ACA + L G
Sbjct: 411 IGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYG 470
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
++ V ++GL++D + +L+ Y C + A +FD M ++++VSWN +I+ +N
Sbjct: 471 KEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQN 530
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
E++ F K G + E ++ V AC++L L LGK H +++ + +G
Sbjct: 531 GLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVG 590
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
++IDMYAK G + +R +F +++ NV +W+A+I+ HG+ +EA+EL+ MK
Sbjct: 591 CSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQM 650
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
P+ T++G+L AC HAG+VE+G +YF EM++ + I+P HY + D+LARAG L +A
Sbjct: 651 PDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALR 710
Query: 389 FIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAE 448
+ MP + + + +LL + A +G +V ++LLELEP ++N V+++N YA
Sbjct: 711 LVNEMPEEADNRIWSSLLRSCRTFGALE---IGEKVAKKLLELEPDKAENYVLLSNLYAG 767
Query: 449 VGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQI 501
+G W+ V VR+ MK +GL+K G SW+E+GG ++ F G Q + A I I
Sbjct: 768 LGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVI 820
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 133/275 (48%), Gaps = 9/275 (3%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
I WN L+ GY + + V VF+D+ +P FT+P V+KAC I + G +
Sbjct: 111 IQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHG 170
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
V K GL DV+ N LV YG C +A KVFD M E ++VSWN +I EN + +
Sbjct: 171 MVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRD 230
Query: 214 AVGYFVKM-KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
+ ++M + G PD T++ +L C G + +G +H ++ G + A++
Sbjct: 231 SFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMV 290
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM--KNSSISPN 330
MY+KCG + A++ F + NV +W+ MI + G EA L M + + N
Sbjct: 291 YMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKAN 350
Query: 331 YVTFLGVLCACNHAGMVED-----GYRYFHEMEHV 360
VT L VL AC + GY + H +HV
Sbjct: 351 EVTILNVLPACLDKLQLRSLKELHGYSFRHCFQHV 385
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 155/308 (50%), Gaps = 13/308 (4%)
Query: 134 FVLKACAEISGLNEGMQVQANVTKSG-LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
+L+AC + G ++ V+ S +D N L++ Y C D+ VFD+M
Sbjct: 48 LLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMET 107
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKM-KDLGFEPDETTMLVVLSACTELGNLSLGKW 251
++++ WN +++ N G+ V F+ + D F+PD T V+ AC + ++ LG+
Sbjct: 108 KNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEV 167
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+H +I+ G VL+ +G AL+ MY KCGAV A +F M E N+ +W++MI +++G+
Sbjct: 168 IHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGF 227
Query: 312 AEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
+ ++ +L M + P+ VT + +L C G V+ G H + G+ +
Sbjct: 228 SRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMG-IHGLAVKLGLSEEVMVN 286
Query: 371 HTMADILARAGHLKEA-YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLL 429
+ M + ++ G+L EA +F+ N N + ++SA S+ +G NE L
Sbjct: 287 NAMVYMYSKCGYLNEAQMSFVKNN--NKNVVSWNTMISAFSL------EGDVNEAFNLLQ 338
Query: 430 ELEPRGSQ 437
E++ +G +
Sbjct: 339 EMQIQGEE 346
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 152/329 (46%), Gaps = 13/329 (3%)
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRG--IKPTEFTYPFVLKACAEISGLNE 147
N+ + WN +I ++ EA + +M+ +G +K E T VL AC + L
Sbjct: 310 NNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRS 369
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
++ + V +N + Y C A KVF + +++V SWN +I +
Sbjct: 370 LKELHGYSFRHCFQH-VELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQ 428
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
N +A+ +M G +PD T+ +L AC L +L GK +H ++ G + +
Sbjct: 429 NGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFV 488
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
GT+L+ Y CG AR+LF RM++ N+ +W+AMI G +Q+G E+L LF + I
Sbjct: 489 GTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGI 548
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH----TMADILARAGHL 383
+ + + V AC+ + G + H + +K ++ ++ D+ A++G +
Sbjct: 549 QSHEIAIVSVFGACSQLSALRLG-----KEAHGYVLKALQTEDAFVGCSIIDMYAKSGCI 603
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIH 412
KE+ + N A++ A IH
Sbjct: 604 KESRKVFDGLK-DKNVASWNAIIVAHGIH 631
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 169/385 (43%), Gaps = 32/385 (8%)
Query: 33 SFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILC 86
S L C K L +IH + +GL+ D + L+ C +SS + + R
Sbjct: 456 SLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDR---- 511
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
+ D + WN +I GY+ + P E++ +F GI+ E V AC+++S L
Sbjct: 512 --MKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALR 569
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G + V K+ D + +++ Y +++ KVFD + +++V SWN II
Sbjct: 570 LGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHG 629
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+ EA+ + +MK +G PD T + +L AC G + G + + ++ ++ +
Sbjct: 630 IHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEG-LKYFKEMQNFNLIEPK 688
Query: 267 LG--TALIDMYAKCGAVGCARLLFSRM-EEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
L LIDM A+ G + A L + M EE + WS+++ G ALE+ +
Sbjct: 689 LEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFG----ALEIGEKVA 744
Query: 324 NS--SISPNYVTFLGVLCACNHAGMVE-DGYRYFHEMEHVHGIKPMRIHYHTMADILARA 380
+ P+ VL + +AG+ + DG R +M +K + + +
Sbjct: 745 KKLLELEPDKAENY-VLLSNLYAGLGKWDGVRRVRQM-----MKEIGLQKDAGCSWIEVG 798
Query: 381 GHLKEAYTFIMNMPFQPNPIVLRAL 405
G + Y+F++ QP +R +
Sbjct: 799 GRV---YSFVVGDSLQPKSAEIRVI 820
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 158/431 (36%), Positives = 230/431 (53%), Gaps = 9/431 (2%)
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D +P +PW LI Y + REAV V + G++P FT VL ACA I+
Sbjct: 607 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 666
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L G V + G+ V+ V Y C A +VFD M + V+W ++
Sbjct: 667 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 726
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL- 263
N EA+ F+ M+ G +PD + LSACT LG L LG+ +++++ L
Sbjct: 727 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQA-IRMVDWDEFLD 785
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
N LGTALIDMYAKCG+ A ++F +M + ++ W+AMILGL G+ + A L M+
Sbjct: 786 NPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQME 845
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
S + N TF+G+LC+C H G+++DG RYFH M ++ I P HY M D+L+RAG L
Sbjct: 846 KSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLL 905
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
+EA+ + +MP N ++L ALL IH + V ++L+ LEP S N V+++
Sbjct: 906 QEAHQLVDDMPMPANAVILGALLGGCKIH---RNTELAEHVLKQLILLEPWNSGNYVMLS 962
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N Y+ G WE + +R MK G++K+ SWVE G +H F G S IY+ L+
Sbjct: 963 NIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLD 1022
Query: 504 TLNLHMKVLNF 514
L L MK + +
Sbjct: 1023 ELGLEMKTMGY 1033
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 108/225 (48%), Gaps = 1/225 (0%)
Query: 127 PTEFTYPFVLKACAEIS-GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACK 185
P+ T P LK+ + + L G Q+ A K ++ + +L+ Y C A +
Sbjct: 547 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 606
Query: 186 VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGN 245
VFD+M S V W +IT ++ L EAV G PD T + VL+AC + +
Sbjct: 607 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 666
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
L+ G+ V + G + + TA +D+Y KCG + AR +F +M + W AM+ G
Sbjct: 667 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 726
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
A +G+ EAL+LF M+ + P+ G L AC G ++ G
Sbjct: 727 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLG 771
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 2/160 (1%)
Query: 228 PDETTMLVVLSACTELGN-LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
P T+ + L + + L + L G+ +H + ++ + N + T+L+ +YAKCG + A+
Sbjct: 547 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 606
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
+F M + W+A+I G EA+ + N + + P+ T + VL AC
Sbjct: 607 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 666
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+ G + E G+ D+ + G + +A
Sbjct: 667 LATGETVWRAAEQ-EGVAQSVFVATAAVDLYVKCGEMAKA 705
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 162/441 (36%), Positives = 231/441 (52%), Gaps = 14/441 (3%)
Query: 84 ILCNYVNDSVPI----------PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYP 133
I C ++D+ I WN +I G A REA+ +F+ M+R G P T+
Sbjct: 381 IRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFV 440
Query: 134 FVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER 193
+L A L +V + +GL D+ N LV Y C A +VFDDM ER
Sbjct: 441 NILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVER 499
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
+V +W V+I+ ++ EA F++M G PD TT + +LSAC G L K VH
Sbjct: 500 NVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVH 559
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
+ G V + ++G AL+ MYAKCG+V AR +F M E +V++W+ MI GLAQHG
Sbjct: 560 SHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGL 619
Query: 314 EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
+AL+LF MK PN +F+ VL AC+HAG+V++G R F + +GI+P HY M
Sbjct: 620 DALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCM 679
Query: 374 ADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP 433
D+L RAG L+EA FI+NMP +P ALL A + + R L+L+P
Sbjct: 680 VDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKER---LKLKP 736
Query: 434 RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQV 493
+ + V+++N YA G WE+ VR M+ G++K G SW+E+ IH F G S
Sbjct: 737 KSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHP 796
Query: 494 ELAGIYQILETLNLHMKVLNF 514
E IY L+ L +K +
Sbjct: 797 ESKEIYAKLKDLIKRLKAEGY 817
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 185/377 (49%), Gaps = 20/377 (5%)
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
+I GYA +A+ V+ M+R G +P E TY +LKAC L G ++ A++ +SG
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
SDV LV Y C DA +FD M ER+V+SW V+I EA F+
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+M+ GF P+ T + +L+A G L K VH + G L+ ++G AL+ MYAK G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
++ AR++F M E ++++W+ MI GLAQHG +EA LF M+ PN T+L +L
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSIL- 239
Query: 340 ACNHAGMVEDGYRYFHEMEHVHG-----IKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
N + + G + + H H I +R+ + + + A+ G + +A M
Sbjct: 240 --NASAITSTGALEWVKEVHKHAGKAGFISDLRVG-NALIHMYAKCGSIDDARLVFDGM- 295
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG----SQNLVIVANKYAEVG 450
R ++S +++ Q+G G+E L+++ G S + + N + G
Sbjct: 296 ------CDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTG 349
Query: 451 MWEKVSNVRRFMKNVGL 467
WE V V + VGL
Sbjct: 350 AWEWVKEVHKHAVEVGL 366
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 159/312 (50%), Gaps = 8/312 (2%)
Query: 32 LSFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
LS LK CCS L +IHA I SG Q+D ++ LV S + A+ I
Sbjct: 34 LSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGS--IDDAQLIFDKM 91
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
V +V I W +I G A R +EA F+ M+R G P +TY +L A A L
Sbjct: 92 VERNV-ISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWV 150
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
+V ++ +GL D+ N LV Y DA VFD M ER + SW V+I ++
Sbjct: 151 KEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQH 210
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVL--SACTELGNLSLGKWVHLQLIERGTVLNCQ 266
EA F++M+ G P+ TT L +L SA T G L K VH + G + + +
Sbjct: 211 GRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLR 270
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+G ALI MYAKCG++ ARL+F M + +V +W+AMI GLAQ+G EA +F M+
Sbjct: 271 VGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEG 330
Query: 327 ISPNYVTFLGVL 338
P+ T+L +L
Sbjct: 331 FVPDSTTYLSLL 342
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 197/428 (46%), Gaps = 18/428 (4%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
++H+ +GL D ++ LV + S ++ AR + V + W +I G A
Sbjct: 152 EVHSHAVNAGLALDLRVGNALVHM--YAKSGSIDDARVVFDGMVERDI-FSWTVMIGGLA 208
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS--GLNEGMQVQANVTKSGLDSD 163
R +EA +F+ M+R G P TY +L A A S L +V + K+G SD
Sbjct: 209 QHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISD 268
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
+ N L+ Y C DA VFD MC+R V+SWN +I +N EA F+KM+
Sbjct: 269 LRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQ 328
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
GF PD TT L +L+ G K VH +E G V + ++G+A + MY +CG++
Sbjct: 329 EGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDD 388
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A+L+F ++ NV TW+AMI G+AQ EAL LF M+ P+ TF+ +L A N
Sbjct: 389 AQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSA-NV 447
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
+ + H G+ +R+ + + + A+ G+ A +M + N
Sbjct: 448 GEEALEWVKEVHSYAIDAGLVDLRVG-NALVHMYAKCGNTMYAKQVFDDM-VERNVTTWT 505
Query: 404 ALLSASSIHDAKYQDGVGNEVRRRLLELEPRG----SQNLVIVANKYAEVGMWEKVSNVR 459
++S + H G G+E L++ G + V + + A G E V V
Sbjct: 506 VMISGLAQH------GCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVH 559
Query: 460 RFMKNVGL 467
N GL
Sbjct: 560 SHAVNAGL 567
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 157/414 (37%), Positives = 218/414 (52%), Gaps = 5/414 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIK--PTEFTYPFVLKACAEISGLNEGMQVQ 152
I WN LI G + R E + +F M++ G+ T VLK+ A + QV
Sbjct: 373 ILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVH 432
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
A K GL SD + N L+ Y C + A KVF + ++S ++T +
Sbjct: 433 ALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGE 492
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
+A+ FV+M G EPD + +L+ACT L GK VH LI+R + G AL+
Sbjct: 493 DAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALV 552
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
YAKCG++ A + FS + E + +WSAMI GLAQHG+ + AL+LF M + ++PN++
Sbjct: 553 YAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHI 612
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
T VL ACNHAG+V+D +YF M+ GI HY M DIL RAG L++A + N
Sbjct: 613 TLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNN 672
Query: 393 MPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMW 452
MPFQ N V ALL AS +H +G +L LEP S V++AN YA GMW
Sbjct: 673 MPFQANAAVWGALLGASRVH---RDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMW 729
Query: 453 EKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
++++ VR+ MK+ +KK MSWVE+ +H F G S IY L L
Sbjct: 730 DEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELG 783
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 186/374 (49%), Gaps = 24/374 (6%)
Query: 71 TLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEF 130
TL S L A + + + D + W++L+ Y+ + PR+A+ F M+ RG+ EF
Sbjct: 45 TLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEF 104
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
P VLK ++ G QV A + L DV+ N LV YG +A ++FD+
Sbjct: 105 ALPVVLKCAPDV---RFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEY 161
Query: 191 C----ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNL 246
ER+ VSWN +I+ V+N G+A+G F +M G P+E V++ACT +L
Sbjct: 162 VGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDL 221
Query: 247 SLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGL 306
G+ VH ++ G + AL+DMY+K G + A +F +M +V +W+A I G
Sbjct: 222 EAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGC 281
Query: 307 AQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG--IK 364
HG+ ALEL MK+S + PN T VL AC AG F+ +HG +K
Sbjct: 282 VTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGA-------FNLGRQIHGFMVK 334
Query: 365 PMRIHYHTMA----DILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD-- 418
+ +A D+ A+ G L +A MP + + I+ AL+S S HD ++ +
Sbjct: 335 AVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMP-RRDLILWNALISGCS-HDGRHGEVL 392
Query: 419 GVGNEVRRRLLELE 432
+ + +R+ L+L+
Sbjct: 393 SLFHRMRKEGLDLD 406
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 131/485 (27%), Positives = 206/485 (42%), Gaps = 55/485 (11%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN---DSVPIPWNNLIR 102
Q+HA + L +D + LV + AR + YV + + WN +I
Sbjct: 121 QVHALAVATRLVHDVFVANALV--AVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMIS 178
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
Y +D+ +A+ VF +M G +P EF + V+ AC L G QV V ++G +
Sbjct: 179 AYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEK 238
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
DV+T N LV Y A VF+ M VVSWN I+ CV + A+ ++MK
Sbjct: 239 DVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMK 298
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
G P+ T+ VL AC G +LG+ +H +++ + + L+DMYAK G +
Sbjct: 299 SSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLD 358
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS--SISPNYVTFLGVL-- 338
AR +F M ++ W+A+I G + G E L LF M+ + N T VL
Sbjct: 359 DARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKS 418
Query: 339 -----CACN----HA-----GMVEDGY-------RYFHEMEHVHGIKPMR-------IHY 370
C+ HA G++ D + Y+ + + IK + I
Sbjct: 419 TASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISS 478
Query: 371 HTMADILARAGHLKEAYTFIMNM---PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRR 427
TM L++ H ++A + M +P+ VL +LL+A + A Q G +V
Sbjct: 479 TTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQ---GKQVHAH 535
Query: 428 LLELEPRGSQNLVIVAN----KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIH 483
L++ R + V N YA+ G E M GL + +SW + G +
Sbjct: 536 LIK---RQFTSDVFAGNALVYAYAKCGSIEDAD-----MAFSGLPERGIVSWSAMIGGLA 587
Query: 484 RFYSG 488
+ G
Sbjct: 588 QHGHG 592
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 112/254 (44%), Gaps = 10/254 (3%)
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L G + +++ KSGL + +N+L+ Y CR A VFD++ + VSW+ ++T
Sbjct: 20 LFAGAHLHSHLLKSGLLAGF--SNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTA 77
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
N +A+ F M+ G +E + VVL + + G VH + V +
Sbjct: 78 YSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPD---VRFGAQVHALAVATRLVHD 134
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRM----EEINVWTWSAMILGLAQHGYAEEALELFS 320
+ AL+ +Y G V AR +F E N +W+ MI ++ + +A+ +F
Sbjct: 135 VFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFR 194
Query: 321 NMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARA 380
M S PN F V+ AC + +E G R H G + + + D+ ++
Sbjct: 195 EMVWSGERPNEFGFSCVVNACTGSRDLEAG-RQVHGAVVRTGYEKDVFTANALVDMYSKL 253
Query: 381 GHLKEAYTFIMNMP 394
G ++ A T MP
Sbjct: 254 GDIEMAATVFEKMP 267
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 169/503 (33%), Positives = 257/503 (51%), Gaps = 44/503 (8%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIH+ + S +D + LV S + YA+S+ + + + WN+LI Y
Sbjct: 172 QIHSLVYRSNYLSDVYMGSALVDM--YSKCGRVEYAQSVF-DEMTVRSRVSWNSLITCYE 228
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK-SGLDSDV 164
+ EA+ +F++M + G++P E T V+ ACA IS + EG Q+ A V K +D+
Sbjct: 229 QNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDL 288
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS--------------------------- 197
N L+ Y C R +A +FD M RSVVS
Sbjct: 289 ILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVK 348
Query: 198 ----WNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
WN +I C +N EA+ F +K P T +L+AC L +L LG+ H
Sbjct: 349 DVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAH 408
Query: 254 LQLIERGTVL------NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA 307
+++ G + +G +LIDMY KCG+V +F M E + +W+AMI+G A
Sbjct: 409 SHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYA 468
Query: 308 QHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
Q+G+ +ALE+F M S +P++VT +GVLCAC+HAG++++G YF M HG+ P++
Sbjct: 469 QNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLK 528
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRR 427
HY M D+L RAG+L+EA I M QP+ IV +LL+A +H +G V ++
Sbjct: 529 DHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVH---RNIQLGEYVVKK 585
Query: 428 LLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYS 487
LLE++P S V+++N YAE W+ V VR+ M+ G+ K G SW+E+ G ++ F
Sbjct: 586 LLEVDPENSGPYVLLSNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMV 645
Query: 488 GYDSQVELAGIYQILETLNLHMK 510
IY +L T+ MK
Sbjct: 646 KDKRHARKKEIYMVLRTILQQMK 668
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 164/349 (46%), Gaps = 51/349 (14%)
Query: 76 KNLTYARSILC-----NYVNDSVPI----------PWNNLIRGYAWSDRPREAVWVFIDM 120
+N+ SI+C +++D+V I WN++I G+ R EA+ F M
Sbjct: 83 RNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQM 142
Query: 121 KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRK 180
G E+++ L ACA + L G Q+ + V +S SDVY + LV Y C R
Sbjct: 143 HGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRV 202
Query: 181 RDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
A VFD+M RS VSWN +IT +N + EA+ FV+M G EPDE T+ V+SAC
Sbjct: 203 EYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSAC 262
Query: 241 TELGNLSLGKWVHLQLIERGTVLN-CQLGTALIDMYAKC--------------------- 278
+ + G+ +H ++++ N LG AL+DMYAKC
Sbjct: 263 ATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSE 322
Query: 279 ----------GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
V AR +FS M +V TW+A+I G Q+G EEAL LF +K S+
Sbjct: 323 TSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVW 382
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL 377
P + TF +L AC + ++ G R H HG R Y +D+
Sbjct: 383 PTHYTFGNLLNACANLADLQLG-RQAHSHVLKHGF---RFQYGEDSDVF 427
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 141/312 (45%), Gaps = 40/312 (12%)
Query: 133 PF--VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
PF +L CA + +V A + KS S+ + N L+ YG C A K+FD M
Sbjct: 21 PFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRM 80
Query: 191 CERSVVSWNVIITVCVENLWLGEAVG-------------------------------YFV 219
ER++ SWN II ++ +L +AV YF
Sbjct: 81 LERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFA 140
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+M GF +E + LSAC L +L LG +H + + + +G+AL+DMY+KCG
Sbjct: 141 QMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCG 200
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
V A+ +F M + +W+++I Q+G +EAL++F M + P+ VT V+
Sbjct: 201 RVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVS 260
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
AC +++G + + + I + + D+ A+ + EA MP
Sbjct: 261 ACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMP----- 315
Query: 400 IVLRALLSASSI 411
+R+++S +S+
Sbjct: 316 --IRSVVSETSM 325
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
Query: 229 DETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLF 288
D + +L+ C + VH +I+ + LID+Y KCG V AR LF
Sbjct: 18 DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77
Query: 289 SRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVE 348
RM E N+++W+++I + G+ ++A+ +F M + ++ ++ G +
Sbjct: 78 DRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQ----VDQCSWNSMISGFEQHGRFD 133
Query: 349 DGYRYFHEMEHVHGI 363
+ YF +M H HG
Sbjct: 134 EALVYFAQM-HGHGF 147
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 161/472 (34%), Positives = 249/472 (52%), Gaps = 8/472 (1%)
Query: 40 SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN-DSVPIPWN 98
S KH +IH I + D + L+ +++ A+ ILC + D+V
Sbjct: 275 SLKHCKEIHGYIIRHAVVLDVFLKSALIDI--YFKCRDVEMAQKILCQSSSFDTVVC--T 330
Query: 99 NLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
+I GY + + +EA+ F + + +KPT T+ + A A ++ LN G ++ ++ K+
Sbjct: 331 TMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKT 390
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
LD + + ++ Y C R AC+VF+ + E+ + WN +IT C +N GEA+ F
Sbjct: 391 KLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLF 450
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
+M G D ++ LSAC L L GK +H +I+ + ++LIDMYAKC
Sbjct: 451 RQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKC 510
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
G + +R +F RM+E N +W+++I HG +E L LF M + I P++VTFLG++
Sbjct: 511 GNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGII 570
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
AC HAG V++G RY+H M +GI HY +AD+ RAG L EA+ I +MPF P+
Sbjct: 571 SACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPD 630
Query: 399 PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
V LL A IH V + + L +L+P S V++AN A G W KV V
Sbjct: 631 AGVWGTLLGACHIHGNVELAEVAS---KHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKV 687
Query: 459 RRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
R MK G++K+ G SW+E+ + H F + S A IY +L++L L +K
Sbjct: 688 RSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELK 739
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 137/276 (49%), Gaps = 7/276 (2%)
Query: 67 VRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIK 126
VR +L +KNL Y + C WN +IRG+ + A+ ++ M G+
Sbjct: 3 VRTGSLKDAKNLFYTLQLGCTSA-------WNWMIRGFTMMGQFNYALLFYLKMLGAGVS 55
Query: 127 PTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKV 186
P ++T+P+V+KAC + + G V V GL DV+ ++L++ Y DA +
Sbjct: 56 PDKYTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYL 115
Query: 187 FDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNL 246
FD++ ++ V WNV++ V+N G A+ F++M+ +P+ T VLS C L
Sbjct: 116 FDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAML 175
Query: 247 SLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGL 306
LG +H + G L+ + L+ MY+KC + AR LF + ++ +W+ +I G
Sbjct: 176 DLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGY 235
Query: 307 AQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
Q+G EA LF M ++ I P+ +TF L N
Sbjct: 236 VQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVN 271
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 150/313 (47%), Gaps = 14/313 (4%)
Query: 35 LKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+K CC K + +H + + GL+ D + L++ + + +L+ A+ Y+ D
Sbjct: 65 VKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKL--YAENGHLSDAQ-----YLFD 117
Query: 92 SVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
++P + WN ++ GY + A+ +F++M+ IKP T+ VL CA + L+
Sbjct: 118 NIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDL 177
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G Q+ GL+ D N L+ Y C+ + A K+FD + +VSWN II+ V+
Sbjct: 178 GTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQ 237
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
N +GEA F M G +PD T L EL +L K +H +I VL+ L
Sbjct: 238 NGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFL 297
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
+ALID+Y KC V A+ + + + + MI G +G +EALE F + +
Sbjct: 298 KSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERM 357
Query: 328 SPNYVTFLGVLCA 340
P VTF + A
Sbjct: 358 KPTSVTFSSIFPA 370
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 170/391 (43%), Gaps = 28/391 (7%)
Query: 35 LKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
L +C S+ L Q+H GL+ D+ + L+ S + L AR + D
Sbjct: 166 LSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAM--YSKCQCLQAARKLF-----D 218
Query: 92 SVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+ P + WN +I GY + EA +F M GIKP T+ L E+ L
Sbjct: 219 TSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKH 278
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
++ + + + DV+ + L+ Y CR A K+ V +I+ V
Sbjct: 279 CKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVL 338
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
N EA+ F + +P T + A L L+LGK +H +I+ C +
Sbjct: 339 NGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHV 398
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
G+A++DMYAKCG + A +F+R+ E + W++MI +Q+G EA+ LF M
Sbjct: 399 GSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGT 458
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI---KPMRIHYH---TMADILARAG 381
+ V+ G L AC + + H + +HG+ P+R + ++ D+ A+ G
Sbjct: 459 RYDCVSISGALSACANLPAL-------HYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCG 511
Query: 382 HLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
+L + M + N + +++SA H
Sbjct: 512 NLNFSRRVFDRMQ-ERNEVSWNSIISAYGNH 541
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 92/183 (50%), Gaps = 7/183 (3%)
Query: 181 RDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
+DA +F + +WN +I A+ +++KM G PD+ T V+ AC
Sbjct: 9 KDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKAC 68
Query: 241 TELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
L ++ +GK VH + G + +G++LI +YA+ G + A+ LF + + + W+
Sbjct: 69 CGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWN 128
Query: 301 AMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHV 360
M+ G ++G + A+++F M++S I PN VTF VL C M++ G +
Sbjct: 129 VMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLG-------TQL 181
Query: 361 HGI 363
HGI
Sbjct: 182 HGI 184
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MY + G++ A+ LF ++ W+ MI G G AL + M + +SP+ T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
F V+ AC V+ G + HE ++ G+K ++ + A GHL +A N+
Sbjct: 61 FPYVVKACCGLKSVKMG-KIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119
Query: 394 PFQPNPIVLRALLSA 408
P Q + ++ +L+
Sbjct: 120 P-QKDSVLWNVMLNG 133
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 149/420 (35%), Positives = 223/420 (53%), Gaps = 4/420 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W LI G++ ++RPR+A+ +F M R G++P FT +LKA GL+ G Q+ A
Sbjct: 155 VTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAF 214
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K G S VY + LV Y C A FD M +S VSWN +I+ A
Sbjct: 215 CLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHA 274
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ KM+ F+P T V SAC +G L GKWVH +I+ G L +G L+DM
Sbjct: 275 LHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDM 334
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAK G++ A+ +F R+ + +V +W+ M+ G AQHG +E L+ F M I PN ++F
Sbjct: 335 YAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISF 394
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
L VL AC+H+G++++G YF M+ + ++P HY T D+L R G L A FI MP
Sbjct: 395 LCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMP 453
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
+P V ALL A +H +G R EL+P S ++++N YA G W
Sbjct: 454 IEPTAAVWGALLGACRMHKNME---LGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRD 510
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
V+ VR+ MK G+KK SWVE+ ++H F + ++ ++ I E ++ +K + +
Sbjct: 511 VAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIRGKWEEISGKIKEIGY 570
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 157/316 (49%), Gaps = 10/316 (3%)
Query: 118 IDMKRRG-IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG-LDSDVYTNNNLVRFYG 175
+D+ +RG + P Y +LK C + + +G V A++ S LD+ + N +V Y
Sbjct: 75 LDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYA 134
Query: 176 SCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLV 235
C DA ++FD+M + +V+W +I +N +A+ F +M LG +P+ T+
Sbjct: 135 KCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSS 194
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
+L A L G +H ++ G + +G+AL+DMYA+CG + A+L F M +
Sbjct: 195 LLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKS 254
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
+W+A+I G A+ G E AL L M+ + P + T+ V AC G +E G ++ H
Sbjct: 255 EVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQG-KWVH 313
Query: 356 EMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAK 415
G+K + +T+ D+ A+AG + +A + + +P+ + +L+ + H
Sbjct: 314 AHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKR-VFDRLVKPDVVSWNTMLTGCAQH--- 369
Query: 416 YQDGVGNEVRRRLLEL 431
G+G E R ++
Sbjct: 370 ---GLGKETLDRFEQM 382
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 165/500 (33%), Positives = 254/500 (50%), Gaps = 38/500 (7%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H + + L +D IL L+ F S + +L A + N V + WN +I +A
Sbjct: 195 LHGMVIKASLSSDLFILNSLINFYGSSGAPDL--AHRVFTNMPGKDV-VSWNAMINAFAL 251
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
P +A+ +F +M+ + +KP T VL ACA+ L G + + + +G +
Sbjct: 252 GGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLIL 311
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSW---------------------------- 198
NN ++ Y C DA +F+ M E+ +VSW
Sbjct: 312 NNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWT 371
Query: 199 ---NVIITVCVENLWLGEAVGYFVKMK-DLGFEPDETTMLVVLSACTELGNLSLGKWVHL 254
N +I+ +N A+ F +M+ +PDE T++ L A +LG + G W+H+
Sbjct: 372 AAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHV 431
Query: 255 QLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEE 314
+ + LNC L T+L+DMYAKCG + A +F +E +V+ WSAMI LA +G +
Sbjct: 432 YIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKA 491
Query: 315 ALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMA 374
AL+LFS+M + I PN VTF +LCACNHAG+V +G + F +ME ++GI P HY +
Sbjct: 492 ALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVV 551
Query: 375 DILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPR 434
DI RAG L++A +FI MP P V ALL A S H + + LLELEP
Sbjct: 552 DIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHG---NVELAELAYQNLLELEPC 608
Query: 435 GSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVE 494
V+++N YA+ G WEKVSN+R+ M++ +KK S +++ G +H F G +S
Sbjct: 609 NHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPF 668
Query: 495 LAGIYQILETLNLHMKVLNF 514
IY L+ ++ K + +
Sbjct: 669 SQKIYSKLDEISEKFKPIGY 688
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 189/393 (48%), Gaps = 45/393 (11%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
L F+ C + L QIHA + + D +L+ +SS L YA+++ +
Sbjct: 76 LEFIDQCTNTMQLKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVF-----N 130
Query: 92 SVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIK-PTEFTYPFVLKACAEISGLN 146
+P P WN LIRGYA S P ++ +F+ M + P +FT+PF+ KA + + L+
Sbjct: 131 QIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLH 190
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G + V K+ L SD++ N+L+ FYGS A +VF +M + VVSWN +I
Sbjct: 191 LGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFA 250
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+A+ F +M+ +P+ TM+ VLSAC + +L G+W+ + G +
Sbjct: 251 LGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLI 310
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEE------------ 314
L A++DMY KCG + A+ LF++M E ++ +W+ M+ G A+ G +E
Sbjct: 311 LNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKW 370
Query: 315 -------------------ALELFSNMKNS-SISPNYVTFLGVLCACNHAGMVEDGYRYF 354
AL LF M+ S P+ VT + LCA G ++ G+ +
Sbjct: 371 TAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGH-WI 429
Query: 355 HEMEHVHGIKPMRIHYHT-MADILARAGHLKEA 386
H H I + H T + D+ A+ G+L +A
Sbjct: 430 HVYIKKHDIN-LNCHLATSLLDMYAKCGNLNKA 461
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 153/413 (37%), Positives = 235/413 (56%), Gaps = 5/413 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
IPW+ +I YA SDR +EA+ +F+ M++ + P FT+ VL+ACA L+ G Q+ +
Sbjct: 304 IPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSC 363
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE- 213
V K GL+S+V+ +N ++ Y C ++ K+F+++ +R+ V+WN II V+ L GE
Sbjct: 364 VLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQ-LGDGER 422
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
A+ F M + +P E T VL A L L G +H I+ + + +LID
Sbjct: 423 AMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLID 482
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MYAKCG + ARL F +M + + +W+AMI G + HG + EAL LF M+++ PN +T
Sbjct: 483 MYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLT 542
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
F+GVL AC++AG++ G +F M + IKP HY M +L R G EA I +
Sbjct: 543 FVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEI 602
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
+QP+ +V RALL A IH + +G + +LE+EP V+++N YA G W+
Sbjct: 603 AYQPSVMVWRALLGACVIHK---KVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWD 659
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
V+ VR++M+ ++K G+SWVE G +H F G S ++ I +LE LN
Sbjct: 660 NVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWLN 712
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 179/387 (46%), Gaps = 16/387 (4%)
Query: 33 SFLKLCCSKK--HL-YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
+ LKL S HL + +HA + G DA + L+ S N+ AR + +
Sbjct: 141 TLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALID--AYSVRGNVDVARHVFDDIC 198
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+ + W ++ YA + E++ +F M+ G KP FT LK+C + N G
Sbjct: 199 CKDM-VSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGK 257
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
V K D D++ L+ Y DA ++F++M + ++ W+++I ++
Sbjct: 258 SVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSD 317
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
EA+ F++M+ P+ T VL AC +L LGK +H +++ G N +
Sbjct: 318 RSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSN 377
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
A++D+YAKCG + + LF + + N TW+ +I+G Q G E A+ LF++M + P
Sbjct: 378 AIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQP 437
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPM----RIHYHTMADILARAGHLKE 385
VT+ VL A +E G + H IK M + +++ D+ A+ G + +
Sbjct: 438 TEVTYSSVLRASASLAALEPGLQI-----HSLTIKTMYNKDTVVANSLIDMYAKCGRIND 492
Query: 386 AYTFIMNMPFQPNPIVLRALLSASSIH 412
A M + + + A++ S+H
Sbjct: 493 ARLTFDKMN-KRDEVSWNAMICGYSMH 518
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 185/397 (46%), Gaps = 34/397 (8%)
Query: 22 SDLLSKAR-----QCLSFLKLCCSKKHLYQI--HAQIQVSGLQNDAQILKELVRFCTLSS 74
S LL + R QCLS L L QI + ++G ILK +
Sbjct: 14 SQLLHQCRNIHHQQCLSALDSHSYAHMLQQIIRNGADPIAGKHLHCHILKR-------GT 66
Query: 75 SKNLTYARSILCNY------------VNDSVP----IPWNNLIRGYAWSDRPREAVWVFI 118
S +L +A++IL N+ + D +P I + L +GY+ + +A+ +
Sbjct: 67 SLDL-FAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFIL 125
Query: 119 DMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCR 178
+ + G + F + +LK + + + A V K G +D + L+ Y S R
Sbjct: 126 RIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAY-SVR 184
Query: 179 RKRDACK-VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVL 237
D + VFDD+C + +VSW ++ EN + E++ F +M+ +G++P+ T+ L
Sbjct: 185 GNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGAL 244
Query: 238 SACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVW 297
+C L ++GK VH ++ + +G AL+++YAK G + A+ LF M + ++
Sbjct: 245 KSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLI 304
Query: 298 TWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM 357
WS MI AQ ++EAL+LF M+ +S+ PN TF VL AC + ++ G + H
Sbjct: 305 PWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLG-KQIHSC 363
Query: 358 EHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
G+ + + D+ A+ G ++ + +P
Sbjct: 364 VLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELP 400
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 80/160 (50%)
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
D + WN +I GY A+ +F M ++PTE TY VL+A A ++ L G+Q
Sbjct: 401 DRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQ 460
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+ + K+ + D N+L+ Y C R DA FD M +R VSWN +I +
Sbjct: 461 IHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGM 520
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
EA+ F M+ +P++ T + VLSAC+ G L G+
Sbjct: 521 SMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQ 560
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 31/226 (13%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILCNYVNDSVPIPWNNLIR 102
QIH+ + D + L+ C + LT+ + +N + WN +I
Sbjct: 460 QIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDK------MNKRDEVSWNAMIC 513
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
GY+ EA+ +F M+ KP + T+ VL AC+ L +G QA+ D
Sbjct: 514 GYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKG---QAHFESMSKDY 570
Query: 163 DV------YTNNNLVRFYGSCRRKRDACKVFDDMC-ERSVVSWNVIITVCV--ENLWLGE 213
D+ YT +V G R +A K+ ++ + SV+ W ++ CV + + LG
Sbjct: 571 DIKPCIEHYT--CMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGR 628
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER 259
V L EP + V+LS + G+W ++ + +
Sbjct: 629 VCAQHV----LEMEPHDDATHVLLSNMYA----TAGRWDNVAFVRK 666
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 159/469 (33%), Positives = 249/469 (53%), Gaps = 7/469 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
++H QI G ++D + LV + + AR I+ ++D + W ++I GY
Sbjct: 190 RVHGQIFRLGFESDVFVQNGLV--ALYAKCGRVEQAR-IVFEGLDDRNIVSWTSMISGYG 246
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ P EA+ +F M++R +KP VL+A ++ L +G + V K GL+ +
Sbjct: 247 QNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPD 306
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
+L Y C + A FD M +V+ WN +I+ +N + EAVG F +M
Sbjct: 307 LLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKN 366
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
D T+ + AC ++G+L L KW+ + + + + TALIDM+AKCG+V AR
Sbjct: 367 IRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAR 426
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F R + +V WSAMI+G HG ++A++LF MK + + PN VTF+G+L ACNH+G
Sbjct: 427 EVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSG 486
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+VE+G+ FH M++ +GI+ HY + D+L R+GHL EAY FI MP +P V AL
Sbjct: 487 LVEEGWELFHSMKY-YGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGAL 545
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
L A I+ +G +L L+P + + V ++N YA +W+ V+ VR M+
Sbjct: 546 LGACKIYR---HVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREK 602
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
GL K G S +E+ G + F G S I++ LE+L +K F
Sbjct: 603 GLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRLKEAGF 651
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 172/319 (53%), Gaps = 9/319 (2%)
Query: 33 SFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLT---YARSILCNYV 89
S L K+HL QIHAQ+ VSGL ++ + V ++S N+ YAR + +
Sbjct: 76 SLLDHSVHKRHLNQIHAQLVVSGLVESGFLVTKFV-----NASWNIGEIGYARKVFDEFP 130
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
SV + WN +IRGY+ + +A+ ++ M+ G+ P FT P VLKAC+ + L G
Sbjct: 131 EPSVFL-WNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGK 189
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
+V + + G +SDV+ N LV Y C R A VF+ + +R++VSW +I+ +N
Sbjct: 190 RVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNG 249
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
EA+ F +M+ +PD ++ VL A T++ +L GK +H +++ G L
Sbjct: 250 LPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLI 309
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
+L MYAKCG V AR F +ME NV W+AMI G A++GY EA+ LF M + +I
Sbjct: 310 SLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRT 369
Query: 330 NYVTFLGVLCACNHAGMVE 348
+ +T + AC G ++
Sbjct: 370 DSITVRSAILACAQVGSLD 388
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 131/265 (49%), Gaps = 14/265 (5%)
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ A + SGL + V + A KVFD+ E SV WN II +
Sbjct: 89 QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+ G+A+ + +M+ G PD T+ VL AC+ + L +GK VH Q+ G + +
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQN 208
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
L+ +YAKCG V AR++F +++ N+ +W++MI G Q+G EAL +F M+ ++ P
Sbjct: 209 GLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKP 268
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG-IKPMRIHYH-----TMADILARAGHL 383
+++ + VL A +E G + +HG + M + + ++ + A+ G +
Sbjct: 269 DWIALVSVLRAYTDVEDLEQG-------KSIHGCVVKMGLEFEPDLLISLTAMYAKCGQV 321
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSA 408
A +F M PN ++ A++S
Sbjct: 322 MVARSFFDQMEI-PNVMMWNAMISG 345
>gi|115439575|ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|20160882|dbj|BAB89820.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113533598|dbj|BAF05981.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|125571815|gb|EAZ13330.1| hypothetical protein OsJ_03251 [Oryza sativa Japonica Group]
Length = 608
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 147/437 (33%), Positives = 241/437 (55%), Gaps = 5/437 (1%)
Query: 73 SSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
S S ++ AR + V + WN++I YA +EA+ +F M G +P T
Sbjct: 162 SKSGDVVKARRLFDGMVRRT-SASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITI 220
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
+ CA+ L G ++ + + L ++ + L+ Y CR +A + FD M +
Sbjct: 221 ATMFSICAKTGDLETGKWARSLIAEQDL-QNMIVHTALMEMYVKCRAIDEARREFDRMQQ 279
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
R VV+W+ +I +N E++ F +MK +P+E T++ VLSAC +LG+ LG +
Sbjct: 280 RDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQI 339
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
+ + L LG+ALIDMY KCG VG AR +F+RME V TW++M+ GLA +G+A
Sbjct: 340 GSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNGFA 399
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
++A+ L+ M + PN +TF+ +L AC HAG+V+ G +F EM+ +H + P H
Sbjct: 400 QDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHCAC 459
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELE 432
+ D+L ++G L+EAY FI +M +PN ++ LLSA H A + + +LL LE
Sbjct: 460 IVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAH-ADVE--LAKLAASKLLVLE 516
Query: 433 PRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQ 492
P S V+++N YA+ G+W V +R M++ ++K+ SW+EL G +H+F
Sbjct: 517 PDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWIELDGEVHKFLVQDTYH 576
Query: 493 VELAGIYQILETLNLHM 509
+ A I+ +++ + LH+
Sbjct: 577 PKSAEIFNVVDGMGLHL 593
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 173/427 (40%), Gaps = 84/427 (19%)
Query: 57 QNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW----NNLIRGYAWSDRPRE 112
Q+ A +LK LS + AR + D+VP P LI + +E
Sbjct: 14 QHLAGLLKTRPLHDLLSDASTSRAARHLF-----DAVPRPTPALCGTLISALSRLCSHQE 68
Query: 113 AVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVR 172
+ F + RRG P V+K+CA ++ +G QV + GL D++ LV
Sbjct: 69 LLDAFSSLHRRGSDVPPGCVPLVVKSCAILAASRQGKQVHCHAIVRGLLGDIFVQTALVD 128
Query: 173 FYGSCRRKRDACKVFDDM-------------------------------CERSVVSWNVI 201
FY A KVFD+M R+ SWN +
Sbjct: 129 FYAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSM 188
Query: 202 ITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGT 261
I EA+ F +M G P+ T+ + S C + G+L GKW LI
Sbjct: 189 IACYAHGGEYQEALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWAR-SLIAEQD 247
Query: 262 VLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSN 321
+ N + TAL++MY KC A+ AR F RM++ +V WS MI G AQ+G E+LELF
Sbjct: 248 LQNMIVHTALMEMYVKCRAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFER 307
Query: 322 MKNSSISPNYVTFLGVLCACNHAGMVEDGYR----------------------------- 352
MK +S PN VT +GVL AC G E G +
Sbjct: 308 MKATSCKPNEVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGH 367
Query: 353 ------YFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP---FQPNPIVLR 403
F+ MEH + I +++M LA G ++A T M QPN I
Sbjct: 368 VGRARSVFNRMEH-----KVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFV 422
Query: 404 ALLSASS 410
ALL+A +
Sbjct: 423 ALLTACT 429
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 169/519 (32%), Positives = 263/519 (50%), Gaps = 32/519 (6%)
Query: 1 MVRFPVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDA 60
M VP H+FP L KA L KL + +HA GL +D
Sbjct: 101 MRSLSVPPNRHVFPS---------LLKASTLLKHHKLA------HSLHACTVRLGLDSDL 145
Query: 61 QILKELV----RFCTLSSSKNLTYARS---ILC-NYVNDSVPI----PWNNLIRGYAWSD 108
I L+ +F ++ R I C V D +P+ WN +I G+A +
Sbjct: 146 YIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNG 205
Query: 109 RPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTN 167
EA+ + +M + G +KP FT +L AE +N+G ++ ++G D DV+
Sbjct: 206 MYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIG 265
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
++L+ Y C R + + F + + +SWN II CV+N +G+F +M +
Sbjct: 266 SSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVK 325
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
P + V+ AC L LSLG+ +H ++ G N + ++L+DMYAKCG + AR +
Sbjct: 326 PMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYV 385
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMV 347
F R+++ ++ W+A+I+G A HG+A +A+ LF NM + P YV F+ VL AC+HAG+V
Sbjct: 386 FDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLV 445
Query: 348 EDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM-PFQPNPIVLRALL 406
++G+RYF+ ME GI P HY +AD+L RAG L+EAY FI NM QP V LL
Sbjct: 446 DEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILL 505
Query: 407 SASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVG 466
+A H + + +V +LL ++ V+++N Y+ W+ + +R M+ G
Sbjct: 506 AACRAHKSVE---LAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKG 562
Query: 467 LKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
LKK SW+E+G +H F +G S I + L+ L
Sbjct: 563 LKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVL 601
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 137/310 (44%), Gaps = 18/310 (5%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
W+++I+ Y + F M+ + P +P +LKA + + A
Sbjct: 78 WSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTV 137
Query: 157 KSGLDSDVYTNNNLVRFYGSCRR---------KRDAC------KVFDDMCERSVVSWNVI 201
+ GLDSD+Y N L+ Y KR KVFD M R VVSWN +
Sbjct: 138 RLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTV 197
Query: 202 ITVCVENLWLGEAVGYFVKM-KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
I +N EA+ +M K+ +PD T+ +L E +++ GK +H + G
Sbjct: 198 IAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNG 257
Query: 261 TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS 320
+ +G++LIDMYAKC + C+ F + + +W+++I G Q+G + L F
Sbjct: 258 FDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFR 317
Query: 321 NMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARA 380
M ++ P V+F V+ AC H + G R H G ++ D+ A+
Sbjct: 318 RMLKENVKPMAVSFSSVIPACAHLTALSLG-RQLHGCIVRLGFDDNEFIASSLVDMYAKC 376
Query: 381 GHLKEA-YTF 389
G++K A Y F
Sbjct: 377 GNIKMARYVF 386
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 162/499 (32%), Positives = 251/499 (50%), Gaps = 22/499 (4%)
Query: 21 NSDLLSKARQCLSFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVR-FCTLSSSK 76
+L R S + C K+L IH+ + S L D +L L+ +C +
Sbjct: 55 TGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVS 114
Query: 77 NLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
+ +V D +P + W LI GYA +D P EA+ + DM R +P+ FT+
Sbjct: 115 D--------ARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTF 166
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
LKA G G Q+ A K LD DVY + L+ Y C++ A +VFD +
Sbjct: 167 TSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDS 226
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
++ VSWN +I + F +M+ GF T V SA +G L G+WV
Sbjct: 227 KNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWV 286
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H +I+ G L + ++ MYAK G++ AR +F R+++ ++ TW+ M+ AQ+G
Sbjct: 287 HAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLG 346
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
+EA+ F ++ I N +TFL VL AC+H G+V++G +YF M+ + ++P HY +
Sbjct: 347 KEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKD-YNVEPEIDHYVS 405
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLEL 431
D+L RAG LKEA F+ MP +P V ALL A +H +AK +G + EL
Sbjct: 406 FVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAK----IGQYAADHVFEL 461
Query: 432 EPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDS 491
+P + V++ N YA G W+ + VR+ MK G+KK SWVE+ S+H F + +
Sbjct: 462 DPEDTGPPVLLYNIYASTGQWDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDST 521
Query: 492 QVELAGIYQILETLNLHMK 510
+ IY++ E +N +K
Sbjct: 522 HPKSEEIYRMWEEVNTRIK 540
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 176/515 (34%), Positives = 254/515 (49%), Gaps = 51/515 (9%)
Query: 4 FPVPTT---NHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDA 60
FP+P + N I KP + S+ L + L+ S L Q+HAQI +
Sbjct: 41 FPIPQSPNRNQIHNVKPQS--SETLK-----IDLLRNFNSPFELRQVHAQIIKTNAPLSI 93
Query: 61 QILKELVRFCTLSSSKNLTYARSIL-CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFID 119
L + C + S YA+ I C WN+ ++ A D P +A+ +F
Sbjct: 94 LPLTRVGLVCAFTPS--FHYAQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYR 151
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
+++ + P FT VL+AC + L+ G + V K G S
Sbjct: 152 LRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRS----------------- 194
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
W +I V+ EA+ F KM++ G + +E T++ VL+A
Sbjct: 195 ------------------WTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAA 236
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C +LG L LG +H G N ++ LIDMY KCG + A +F MEE V +W
Sbjct: 237 CADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSW 296
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
SAMI GLA HG AEEAL LFS+M I PN VTF+G+L AC+H G++ +G R+F M
Sbjct: 297 SAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTR 356
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
+GI P HY M D+L+RAG L EA+ FI+NMP +PN +V ALL A +H
Sbjct: 357 DYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHK---NVE 413
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
+ E + LLEL+P V+++N YAE G WE + VR+FMK+ +KK G S + +
Sbjct: 414 MAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVD 473
Query: 480 GSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
G +H F +G +S + I+Q E L M++ +
Sbjct: 474 GVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGY 508
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 167/518 (32%), Positives = 266/518 (51%), Gaps = 43/518 (8%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
+ L LC ++++ QIHA + + + + + ELV S L YA+ I N +
Sbjct: 484 TLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHM--YSECGRLNYAKEIF-NRM 540
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+ WN++I GY + +EA+ +F M+ GIKP F+ +L +C +S +G
Sbjct: 541 AERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGR 600
Query: 150 QVQANVTKSGLDS-------------------------------DVYTNNNLVRFYGSCR 178
++ + ++ ++ DV NN +V + +
Sbjct: 601 ELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSG 660
Query: 179 RKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
R DA +FD M +R+ WN I+ E+ +F++M + E D TM+ +++
Sbjct: 661 RANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVN 720
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQ--LGTALIDMYAKCGAVGCARLLFSRMEEINV 296
C+ L L G +H +I++G V NC L TAL+DMY+KCGA+ AR +F M N+
Sbjct: 721 LCSSLPALEHGDQLHSLIIKKGFV-NCSVVLETALVDMYSKCGAITKARTVFDNMNGKNI 779
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
+W+AMI G ++HG ++EAL L+ M + PN VTFL +L AC+H G+VE+G R F
Sbjct: 780 VSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTS 839
Query: 357 MEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKY 416
M+ + I+ HY M D+L RAG L++A F+ MP +P ALL A +H K
Sbjct: 840 MQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVH--KD 897
Query: 417 QDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWV 476
D +G +RL EL+P+ VI++N YA G W++V ++R+ MK G+KK G+SW+
Sbjct: 898 MD-MGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWI 956
Query: 477 ELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
E+ I F++G + + IY L L L K L +
Sbjct: 957 EINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGY 994
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 131/248 (52%), Gaps = 1/248 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I GY EA +F M + G+ P FT+ L+ C + + G QV +
Sbjct: 242 VTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSK 301
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ G D + N L+ Y C + KVFD+M ER+ V+WN II+ + +A
Sbjct: 302 LIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDA 361
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F++M++ G++ + + +L A L ++ G+ +H L+ + LG+AL+DM
Sbjct: 362 LVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDM 421
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS-ISPNYVT 333
Y+KCG V A +F + E N +++A++ G Q G AEEALEL+ +M++ I P+ T
Sbjct: 422 YSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFT 481
Query: 334 FLGVLCAC 341
F +L C
Sbjct: 482 FTTLLTLC 489
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 193/431 (44%), Gaps = 26/431 (6%)
Query: 5 PVPTTNHIFPPKPSNC--NSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQI 62
P PT+ H P N S L+ SF + IH Q+ +G DA +
Sbjct: 56 PKPTSIHTKPASDVNPLPYSSLIQDCIDSNSF-------QRGKSIHTQMISNGYNPDAYL 108
Query: 63 LKELVRFCTLSSS-KNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMK 121
+ +++ S +L YAR + ++ WN +I YA D E + ++ M+
Sbjct: 109 MTKILMLYARSGCLDDLCYARKLFEEMPERNL-TAWNTMILAYARVDDYMEVLRLYGRMR 167
Query: 122 RRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKR 181
G +FT+P V+KAC + + Q+Q++V K+GL+ +++ LV Y
Sbjct: 168 GSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMD 227
Query: 182 DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
DA D++ SVV+WN +I V+ L EA G F +M +G PD T L C
Sbjct: 228 DAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCG 287
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
L + GK VH +LI G + +G ALIDMYAKC +F M E N TW++
Sbjct: 288 ALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNS 347
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGY-RYFHEMEHV 360
+I AQ G+ +AL LF M+ S N +L A AG+ + G R H
Sbjct: 348 IISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMAS--AGLADIGKGRELHGHLVR 405
Query: 361 HGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA-----------S 409
+ + I + D+ ++ G ++EA+ ++ + N + ALL+
Sbjct: 406 NLLNSDIILGSALVDMYSKCGMVEEAHQVFRSL-LERNEVSYNALLAGYVQEGKAEEALE 464
Query: 410 SIHDAKYQDGV 420
HD + +DG+
Sbjct: 465 LYHDMQSEDGI 475
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 162/351 (46%), Gaps = 35/351 (9%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRR-GIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ +N L+ GY + EA+ ++ DM+ GI+P +FT+ +L CA N+G Q+ A
Sbjct: 444 VSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHA 503
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
++ ++ + ++ LV Y C R A ++F+ M ER+ SWN +I +N E
Sbjct: 504 HLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQE 563
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
A+ F +M+ G +PD ++ +LS+C L + G+ +H ++ L L+D
Sbjct: 564 ALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVD 623
Query: 274 MYAKCGAVGC-------------------------------ARLLFSRMEEINVWTWSAM 302
MYAKCG++ A+ LF +ME+ N W+++
Sbjct: 624 MYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSI 683
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
+ G A G +E+ F M S I + +T + ++ C+ +E G + H + G
Sbjct: 684 LAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQ-LHSLIIKKG 742
Query: 363 IKPMRIHYHT-MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
+ T + D+ ++ G + +A T NM + N + A++S S H
Sbjct: 743 FVNCSVVLETALVDMYSKCGAITKARTVFDNMNGK-NIVSWNAMISGYSKH 792
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 229/416 (55%), Gaps = 3/416 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I G A + +A+ + +M ++P FT VL AE L +G ++
Sbjct: 162 VSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGY 221
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
++G D+DV+ ++L+ Y C R D+C+VF + + +SWN II CV+N E
Sbjct: 222 AIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEG 281
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ +F +M +P+ + ++ AC L L LGK +H +I N + +AL+DM
Sbjct: 282 LKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDM 341
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG + AR +F +ME ++ +W+AMI+G A HG+A +A+ LF M+ + PNYV F
Sbjct: 342 YAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAF 401
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ VL AC+HAG+V++ ++YF+ M + I P HY +AD+L R G L+EAY FI +M
Sbjct: 402 MAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMH 461
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
+P V LL+A +H + +V ++L ++P+ V+++N Y+ G W+
Sbjct: 462 IEPTGSVWSTLLAACRVHK---NIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKD 518
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+R M++ G+KK SW+E+ +H F +G S I + L+ L M+
Sbjct: 519 ARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQME 574
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 155 VTKSGLDSDVYTNNNLVRFY-GSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
V G SDVY+ +Y GS R KVF+ M +R +VSWN +I+ +N +
Sbjct: 126 VFDEGKTSDVYSKKEKESYYLGSLR------KVFEMMPKRDIVSWNTVISGNAQNGMHED 179
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
A+ +M + PD T+ VL E NL GK +H I G + +G++LID
Sbjct: 180 ALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLID 239
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MYAKC V + +F + + + +W+++I G Q+G +E L+ F M + I PN+V+
Sbjct: 240 MYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVS 299
Query: 334 FLGVLCACNH 343
F ++ AC H
Sbjct: 300 FSSIMPACAH 309
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 154/443 (34%), Positives = 241/443 (54%), Gaps = 5/443 (1%)
Query: 73 SSSKNLTYARSIL-CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFT 131
S +L ARSI +++ PWN +I GY S +A+ +F M + I +T
Sbjct: 318 SKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYT 377
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSD-VYTNNNLVRFYGSCRRKRDACKVFDDM 190
Y V A A + L+ G +V A KSGL+ + V +N + Y C D KVF+ M
Sbjct: 378 YCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRM 437
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
+R ++SW ++T + +A+ F M+ G P++ T VL +C L L G+
Sbjct: 438 EDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQ 497
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
VH + + G ++ + +AL+DMYAKCG +G A+ +F+R+ + +W+A+I G AQHG
Sbjct: 498 QVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHG 557
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
++AL+LF M + PN VTFL VL AC+H G+VE+G +YF M+ +G+ P HY
Sbjct: 558 IVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHY 617
Query: 371 HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLE 430
+ D+L+R GHL +A FI MP +PN +V + LL A +H +G +++L
Sbjct: 618 ACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHG---NVELGELAAQKILS 674
Query: 431 LEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYD 490
+ S V+++N Y E G ++ ++R MK G+KK G SW+ + G++H+FY+G
Sbjct: 675 FKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVNGTLHKFYAGDQ 734
Query: 491 SQVELAGIYQILETLNLHMKVLN 513
E IY LE L L + L+
Sbjct: 735 QHPEKDKIYAKLEELKLKLISLD 757
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 140/288 (48%), Gaps = 8/288 (2%)
Query: 96 PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANV 155
W LI G A + + F +M+ +GI P +F Y +L+ C + + G V A +
Sbjct: 138 SWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQI 197
Query: 156 TKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
G S + + L+ Y + D+ KVF+ M E +VVSWN +IT N +A
Sbjct: 198 VIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAF 257
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY 275
F++M G PD T + V A L +++ K V +E G N +GTALIDM
Sbjct: 258 DLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMN 317
Query: 276 AKCGAVGCARLLFSRMEEINVWT--WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
+KCG++ AR +F+ + W+AMI G + G+ E+ALELF+ M + I ++ T
Sbjct: 318 SKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYT 377
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKP-MRIHYHTMADILARA 380
+ V A + G + H IK + ++Y ++++ +A A
Sbjct: 378 YCSVFNAIAALKCLSLGKKV-----HARAIKSGLEVNYVSISNAVANA 420
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 130/269 (48%), Gaps = 16/269 (5%)
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDS--DVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
+L+ C + L + V + KS + + N++ Y C AC++FD M +
Sbjct: 74 LLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQ 133
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
R+ SW V+I EN + +F +M+ G PD+ +L C L ++ LG V
Sbjct: 134 RNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMV 193
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H Q++ RG + + TAL++MYAK + + +F+ M E+NV +W+AMI G +
Sbjct: 194 HAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLY 253
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR------YFHEMEHVHGIKPM 366
+A +LF M ++P+ TF+GV A GM+ D + Y E+ G+
Sbjct: 254 LDAFDLFLRMMGEGVTPDAQTFIGVAKAI---GMLRDVNKAKEVSGYALEL----GVDSN 306
Query: 367 RIHYHTMADILARAGHLKEAYTFIMNMPF 395
+ + D+ ++ G L+EA + I N F
Sbjct: 307 TLVGTALIDMNSKCGSLQEARS-IFNSHF 334
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 2/139 (1%)
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KC + A LF +M + N ++W+ +I GLA++G + E F M++ I P+ +
Sbjct: 115 YSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAY 174
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
G+L C +E G H + G + ++ A+ ++++Y + N
Sbjct: 175 SGILQICIGLDSIELG-NMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYK-VFNTM 232
Query: 395 FQPNPIVLRALLSASSIHD 413
+ N + A+++ + +D
Sbjct: 233 TEVNVVSWNAMITGFTSND 251
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 150/420 (35%), Positives = 222/420 (52%), Gaps = 4/420 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W LI G++ ++RPR+A+ +F M R G +P FT +LKA GL+ G Q+ A
Sbjct: 155 VTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAF 214
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K G S VY + LV Y C A FD M +S VSWN +I+ A
Sbjct: 215 CLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHA 274
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ KM+ F+P T VLSAC +G L GKWVH +I+ G L +G L+DM
Sbjct: 275 LHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDM 334
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAK G++ A+ +F R+ + +V +W+ M+ G AQHG +E L+ F M I PN ++F
Sbjct: 335 YAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISF 394
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
L VL AC+H+G++++G YF E+ + ++P HY T D+L R G L A FI MP
Sbjct: 395 LCVLTACSHSGLLDEGLYYF-ELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMP 453
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
+P V ALL A +H +G R EL+P S ++++N YA G W
Sbjct: 454 IEPTAAVWGALLGACRMHKNME---LGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRD 510
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
V+ VR+ MK G+KK SWVE+ ++H F + ++ + I E ++ +K + +
Sbjct: 511 VAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEISGKIKEIGY 570
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 159/316 (50%), Gaps = 10/316 (3%)
Query: 118 IDMKRRG-IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG-LDSDVYTNNNLVRFYG 175
+D+ +RG + P Y +LK C + + +G V A++ S LD+ + N +V Y
Sbjct: 75 LDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYA 134
Query: 176 SCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLV 235
C DA ++FD+M + +V+W +I +N +A+ F +M LGF+P+ T+
Sbjct: 135 KCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSS 194
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
+L A L G +H ++ G + +G+AL+DMYA+CG + A+L F M +
Sbjct: 195 LLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKS 254
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
+W+A+I G A+ G E AL L M+ + P + T+ VL AC G +E G ++ H
Sbjct: 255 EVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQG-KWVH 313
Query: 356 EMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAK 415
G+K + +T+ D+ A+AG + +A + + +P+ + +L+ + H
Sbjct: 314 AHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKR-VFDRLVKPDVVSWNTMLTGCAQH--- 369
Query: 416 YQDGVGNEVRRRLLEL 431
G+G E R ++
Sbjct: 370 ---GLGKETLDRFEQM 382
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 163/499 (32%), Positives = 250/499 (50%), Gaps = 47/499 (9%)
Query: 49 AQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPI----PWNNLIRGY 104
+Q G D ++ + F ++ + +AR + D P+ WN LI GY
Sbjct: 145 GHVQKLGFSADVFVVNAAMHFWSVRGP--MAFARRLF-----DESPVRDVVSWNTLIGGY 197
Query: 105 AWSDRPREAVWVFIDMKRRG--IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
S PREA+ +F + G ++P E T + CA++ L G ++ V G+
Sbjct: 198 VRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRC 257
Query: 163 DVYTNNNLVRFYGSCRR-------------------------------KRDACKVFDDMC 191
V N ++ Y C DA +FD+M
Sbjct: 258 TVRLMNAVMDMYVKCGSLELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMP 317
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
ER V WN ++ V+N EA+ F +M+ +P+E TM+ +LSAC++LG L +G W
Sbjct: 318 ERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMW 377
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
VH + L+ LGT+L+DMYAKCG + A +F+ + N TW++MI GLA HG+
Sbjct: 378 VHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNALTWTSMICGLANHGH 437
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
A+EA+E F M + + P+ +TF+GVL AC HAG+VE G ++F M + ++ HY
Sbjct: 438 ADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHYS 497
Query: 372 TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLEL 431
M D+L RAGHL EA + MP P+ +V AL A +H +G + +L+EL
Sbjct: 498 CMIDLLGRAGHLDEAEQLVNAMPMDPDAVVWGALFFACRMHG---NITLGEKAAMKLVEL 554
Query: 432 EPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDS 491
+P S V++AN YAE M +K VR M+++G++K+ G S +EL G +H F S
Sbjct: 555 DPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKS 614
Query: 492 QVELAGIYQILETLNLHMK 510
++ IY L + L M+
Sbjct: 615 HLDTNAIYDCLHEITLQMR 633
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 188/399 (47%), Gaps = 48/399 (12%)
Query: 44 LYQIHAQIQVSGL---QNDAQILKELVRFCTLS---SSKNLTYARSILCNYVN--DSVPI 95
L ++HA VSGL + + + LV S S + L +A +IL + + DS
Sbjct: 24 LLKLHAHHLVSGLLSSHSTSPFIDRLVAAFAHSDPASPRPLLHALAILASLPSPPDSA-F 82
Query: 96 PWNNLIRGYAWSDR----PREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEISGLNEGMQ 150
P+N R + R + ++ + G +P T+PF++KACA + + G
Sbjct: 83 PYNAAFRALSLCPHQHLVDRHCLPLYRALLHSGSARPDHLTFPFLIKACARLQYRSYGAA 142
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
V +V K G +DV+ N + F+ A ++FD+ R VVSWN +I V +
Sbjct: 143 VLGHVQKLGFSADVFVVNAAMHFWSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGL 202
Query: 211 LGEAVGYFVKMKDLG--FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
EA+ F ++ + G PDE T++ +S C ++G+L LGK +H + +G +L
Sbjct: 203 PREALELFWRLAEDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLM 262
Query: 269 TALIDMYAKCGA-----------------------VGCARL--------LFSRMEEINVW 297
A++DMY KCG+ VG ARL LF M E +V+
Sbjct: 263 NAVMDMYVKCGSLELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVF 322
Query: 298 TWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM 357
W+A++ G Q+ +EA+ LF M+ S + PN +T + +L AC+ G +E G H +
Sbjct: 323 PWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYI 382
Query: 358 EHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
+ H + ++ D+ A+ G++K+A +P Q
Sbjct: 383 DR-HKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQ 420
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 160/478 (33%), Positives = 253/478 (52%), Gaps = 23/478 (4%)
Query: 25 LSKARQCLSFLKLCCSKKHLY----QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTY 80
LS L +L CS+ H + QIHA +GL ++ + L+RF +S +
Sbjct: 134 LSPDTYTLPYLLKACSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYAVSG-----F 188
Query: 81 ARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
++ V D P I W LI+ Y+ P EA+ F R T VL
Sbjct: 189 IEAV--EKVFDQGPHWDLISWTTLIQAYSKMGYPSEAIAAFF---RMNCTADRMTLVVVL 243
Query: 137 KACAEISGLNEGMQVQANVTKSGLD--SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
AC+++ G ++ A + D SDV+ N L+ Y C + A ++F M ++
Sbjct: 244 SACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKN 303
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHL 254
+VSWN +I+ EA+ F +M+ +G +PD T++ VL++C LG+L LGKWVH
Sbjct: 304 LVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHS 363
Query: 255 QLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEE 314
+ + + + AL+DMYAKCG++ A ++F M+ +V++++AMI+G A HG A+
Sbjct: 364 YIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADR 423
Query: 315 ALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMA 374
AL +FS M + P++VT +GVL AC+HAG++E+G R+F +M ++ ++P HY M
Sbjct: 424 ALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTEHYGCMV 483
Query: 375 DILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPR 434
D+L RAG + EA F MP P+ V +LL A IH AK + +G V ++L+E+EP
Sbjct: 484 DLLGRAGLISEAEAFTNKMPIVPDASVWGSLLGACKIH-AKVE--LGETVIQKLIEMEPE 540
Query: 435 GSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQ 492
++++N Y+ W R+ MK +KK G S +E+ G +H F G S
Sbjct: 541 RDGAYILMSNIYSSANRWRDALKWRKAMKQNNIKKTPGCSSIEVDGMVHEFRKGEKSH 598
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 188/381 (49%), Gaps = 29/381 (7%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSS------------KNLT 79
L L C S + + QIHA I + L ++ CT +S +NL
Sbjct: 30 LLLLSSCKSVREIKQIHASIIKANTTRSTTTLP-IISLCTKITSLLQQDVHLADSIQNLW 88
Query: 80 YARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVW-VFIDMKRRGIKPTEFTYPFVLKA 138
YA S L N+ + + +N +I+ + S+ ++ ++ M G+ P +T P++LKA
Sbjct: 89 YASS-LANFCHQNPVYIFNAIIQSLSTSNNTFTHIFSLYRQMLLIGLSPDTYTLPYLLKA 147
Query: 139 CAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSW 198
C++ E +Q+ A+ K+GL S+++ N L+RFY KVFD ++SW
Sbjct: 148 CSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISW 207
Query: 199 NVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV------ 252
+I + + EA+ F +M D T++VVLSAC++LG+ +LGK +
Sbjct: 208 TTLIQAYSKMGYPSEAIAAFFRM---NCTADRMTLVVVLSACSQLGDFTLGKKILAYMDH 264
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
HL + LG AL+DMY KCG AR LF M N+ +W++MI GLA G
Sbjct: 265 HLFDVHSDVF----LGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLF 320
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
+EAL +F M+ + P+ VT +GVL +C + G +E G ++ H + +K +
Sbjct: 321 KEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELG-KWVHSYIDKNHMKADGYVANA 379
Query: 373 MADILARAGHLKEAYTFIMNM 393
+ D+ A+ G + +A+ M
Sbjct: 380 LVDMYAKCGSIDQAFMVFQAM 400
>gi|326527617|dbj|BAK08083.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 642
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 161/492 (32%), Positives = 252/492 (51%), Gaps = 36/492 (7%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY-VNDSVPI--------- 95
Q+H V GL D +L LV F + + ++ A S+ V D +PI
Sbjct: 140 QVHCHALVRGLLGDVFVLTALVDF--YAKNGDMESAVSVFDEMPVKDPIPINCLITGYSK 197
Query: 96 --------------------PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFV 135
WN++I YA REA+ +F M G +P T V
Sbjct: 198 AGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALTLFDRMLSEGARPNAITITSV 257
Query: 136 LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSV 195
CA+ L+ G +V+ + + L +V + L+ Y CR DA + FD M +R V
Sbjct: 258 FSICAKSGDLDTGKRVRDLIGEDDL-QNVIVHTALMEMYVKCRAIDDARREFDRMSQRDV 316
Query: 196 VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQ 255
V+W+ +I +N E++ F +MK P+E T++ V+SAC +LG+ L + +
Sbjct: 317 VAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLGSDELVEQIGNY 376
Query: 256 LIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEA 315
+ L LG+ALIDMY +CG VG AR +FSRME+ V TW++MI GLA +G+AE+A
Sbjct: 377 AENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAEDA 436
Query: 316 LELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMAD 375
+ L+ M + + PN +TF+ +L AC HAG+V+ G +F EM+ H + P H + D
Sbjct: 437 ISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQVEHCACIVD 496
Query: 376 ILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
+L ++G L EAY FI +M +PN ++ LLS+ H A + + R+LL +EP
Sbjct: 497 LLCKSGGLWEAYKFICDMEVEPNAVIWTTLLSSCRAH-ADVE--LAKLASRKLLAMEPDN 553
Query: 436 SQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVEL 495
S V+++N YA+ G+W +R M++ ++K+ SW++L G +H+F
Sbjct: 554 SSIYVLLSNIYADAGLWGDAREIRDLMRSKNVQKLSAYSWIKLDGEVHKFLVQDTYHPRS 613
Query: 496 AGIYQILETLNL 507
A IY ++ L L
Sbjct: 614 AEIYDVIHGLGL 625
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 130/470 (27%), Positives = 186/470 (39%), Gaps = 88/470 (18%)
Query: 59 DAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW----NNLIRGYAWSDRPREAV 114
+A++LK S + AR++ D+VP P + + + + + +
Sbjct: 50 EARLLKTRPFHAIFSDATTSRAARNLF-----DAVPRPAPALCSTFLSSLSRASSHHDLL 104
Query: 115 WVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFY 174
F M R+G P V K+CA + +G QV + GL DV+ LV FY
Sbjct: 105 QTFSSMHRKGAYVPSGCVPLVFKSCALTASSCQGRQVHCHALVRGLLGDVFVLTALVDFY 164
Query: 175 GSCRRKRDACKVFDDM---------C----------------------ERSVVSWNVIIT 203
A VFD+M C R+ SWN +I
Sbjct: 165 AKNGDMESAVSVFDEMPVKDPIPINCLITGYSKAGDVDKARRLFDGMERRTSASWNSMIA 224
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
EA+ F +M G P+ T+ V S C + G+L GK V LI +
Sbjct: 225 CYAHGGEFREALTLFDRMLSEGARPNAITITSVFSICAKSGDLDTGKRVR-DLIGEDDLQ 283
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
N + TAL++MY KC A+ AR F RM + +V WS MI G AQ+G E+LELF MK
Sbjct: 284 NVIVHTALMEMYVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMK 343
Query: 324 NSSISPNYVTFLGVLCACNHAG---MVEDGYRY--------------------------- 353
+ PN VT +GV+ AC G +VE Y
Sbjct: 344 ATDCRPNEVTLVGVISACAQLGSDELVEQIGNYAENQRLPLTSYLGSALIDMYTRCGHVG 403
Query: 354 -----FHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP---FQPNPIVLRAL 405
F ME G+ I +++M LA G ++A + M QPN I AL
Sbjct: 404 RARSVFSRMEQ-KGV----ITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEITFVAL 458
Query: 406 LSASSIHDAKYQDGVG--NEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
L+A + H G+ E++R L + P+ IV G+WE
Sbjct: 459 LAACT-HAGLVDQGMAFFEEMKREHL-VSPQVEHCACIVDLLCKSGGLWE 506
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 155/461 (33%), Positives = 241/461 (52%), Gaps = 6/461 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIH+ +G Q+D + L+ S L A+ IL + + + + W ++I GY
Sbjct: 366 QIHSLTIKNGFQSDMYVSGVLIDM--YSKYGWLDKAQRIL-DMIEEKDVVSWTSMIAGYV 422
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ +EA+ F +M+ GI P + ACA I +++G Q+ A V SG +DV
Sbjct: 423 QHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVS 482
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N LV Y C ++A F+ + + ++WN +I+ ++ EA+ F+KM G
Sbjct: 483 IWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAG 542
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+ + T + +SA L ++ GK +H ++I+ G ++ ALI +Y KCG++ A+
Sbjct: 543 AKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAK 602
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+ F M + N +W+ +I +QHG EAL+LF MK + P+ VTF+GVL AC+H G
Sbjct: 603 MDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVG 662
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+VE+G YF M + HGI P HY + DIL RAG L A F+ MP + +V R L
Sbjct: 663 LVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTL 722
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
LSA +H +G + LLELEP S + V+++N YA G W +R+ MK+
Sbjct: 723 LSACKVHK---NLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDR 779
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
G++K G SW+E+ +H F+ G IY L LN
Sbjct: 780 GVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLN 820
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 191/411 (46%), Gaps = 17/411 (4%)
Query: 32 LSFLKLCCSKKHLYQ----IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
LS + C+K L+Q IH Q+ G ++ + L+ S L A + C+
Sbjct: 146 LSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRL--ADRVFCD 203
Query: 88 YVN-DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
+ DSV +N LI G+A A+ +F +M+ G+ P T +L AC+ + L
Sbjct: 204 MLYCDSVT--FNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLR 261
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
+G Q+ + + K+G+ D +L+ Y +A ++FD +VV WN+++
Sbjct: 262 KGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYG 321
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+ L ++ F +M G P++ T +L CT G + LG+ +H I+ G +
Sbjct: 322 QIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMY 381
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+ LIDMY+K G + A+ + +EE +V +W++MI G QH + +EALE F M+
Sbjct: 382 VSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACG 441
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
I P+ + + AC V G + H +V G ++ + + AR G KEA
Sbjct: 442 IWPDNIGLASAISACAGIKAVHQGSQ-IHARVYVSGYSADVSIWNGLVYLYARCGISKEA 500
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
++ + + I L+S + Q G+ E + ++++ G++
Sbjct: 501 FSSFEAIEHKEG-ITWNGLISGFA------QSGLYEEALKVFMKMDQAGAK 544
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 188/422 (44%), Gaps = 17/422 (4%)
Query: 4 FPVPTTNHIFPPKPSNCNSDLLSKARQ--CLSFLKLCCSKKH----------LYQIHAQI 51
F P + P P +K RQ L + C+ + + +IHA+
Sbjct: 9 FNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPLVPEIHAKA 68
Query: 52 QVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPR 111
+ GL I L+ L + K + ++ + W ++ GYA +
Sbjct: 69 IICGLSGYRIIGNLLI---DLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGE 125
Query: 112 EAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLV 171
EAV ++ +M R G+ PT + +L AC + G + V K G S+ + N L+
Sbjct: 126 EAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALI 185
Query: 172 RFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDET 231
Y CR R A +VF DM V++N +I+ + A+G F +M+ G PD
Sbjct: 186 SLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSV 245
Query: 232 TMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM 291
T+ +L+AC+ +G+L GK +H L++ G L+ + +L+D+Y K G + A +F
Sbjct: 246 TIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSG 305
Query: 292 EEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGY 351
+ NV W+ M++ Q ++ ++F M + + PN T+ +L C H G + G
Sbjct: 306 DRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGE 365
Query: 352 RYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSI 411
+ H + +G + + D+ ++ G L +A I++M + + + ++++
Sbjct: 366 Q-IHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQR-ILDMIEEKDVVSWTSMIAGYVQ 423
Query: 412 HD 413
H+
Sbjct: 424 HE 425
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 123/256 (48%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN ++ Y D ++ +F M G++P +FTYP +L+ C + G Q+ +
Sbjct: 311 VLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSL 370
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K+G SD+Y + L+ Y A ++ D + E+ VVSW +I V++ + EA
Sbjct: 371 TIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEA 430
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M+ G PD + +SAC + + G +H ++ G + + L+ +
Sbjct: 431 LETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYL 490
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YA+CG A F +E TW+ +I G AQ G EEAL++F M + N TF
Sbjct: 491 YARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTF 550
Query: 335 LGVLCACNHAGMVEDG 350
+ + A + ++ G
Sbjct: 551 VSSISASANLADIKQG 566
>gi|356504054|ref|XP_003520814.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Glycine max]
Length = 563
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 160/444 (36%), Positives = 247/444 (55%), Gaps = 22/444 (4%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPWNNLIR 102
IH+ I SG + DA L+ S ++ + D++P + W LI
Sbjct: 126 IHSCIVKSGFEADAYTATGLLHMYV--SCADMKSGLKVF-----DNIPKWNVVAWTCLIA 178
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
GY +++P EA+ VF DM ++P E T L ACA ++ G V + K+G D
Sbjct: 179 GYVKNNQPYEALKVFEDMSHWNVEPNEITMVNALIACAHSRDIDTGRWVHQRIRKAGYDP 238
Query: 163 DVYTNNN-------LVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
+ T+N+ ++ Y C R + A +F+ M +R++VSWN +I + EA+
Sbjct: 239 FMSTSNSNIILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYERHQEAL 298
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY 275
F M G PD+ T L VLS C L+LG+ VH L++ G + L TAL+DMY
Sbjct: 299 DLFFDMWTSGVYPDKATFLSVLSVCAHQCALALGQTVHAYLLKTGIATDISLATALLDMY 358
Query: 276 AKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK-NSSISPNYVTF 334
AK G +G A+ +FS +++ +V W++MI GLA HG+ EAL +F M+ +SS+ P+++T+
Sbjct: 359 AKTGELGNAQKIFSSLQKKDVVMWTSMINGLAMHGHGNEALSMFQTMQEDSSLVPDHITY 418
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+GVL AC+H G+VE+ ++F M ++G+ P R HY M D+L+RAGH +EA + M
Sbjct: 419 IGVLFACSHVGLVEEAKKHFRLMTEMYGMVPGREHYGCMVDLLSRAGHFREAERLMETMT 478
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
QPN + ALL+ IH+ V N+V+ RL ELEP S ++++N YA+ G WE+
Sbjct: 479 VQPNIAIWGALLNGCQIHE---NVCVANQVKVRLKELEPCQSGVHILLSNIYAKAGRWEE 535
Query: 455 VSNVRRFMKNVGLKKMKGMSWVEL 478
V+ R+ MK+ + K G S VE+
Sbjct: 536 VNVTRKVMKHKRITKTIGHSSVEM 559
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 128/399 (32%), Positives = 205/399 (51%), Gaps = 16/399 (4%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LS L C S + L ++H I + L +L+ FC S ++ YA +L N
Sbjct: 8 LSLLAKCKSMRELKKLHGLIVTTPTIKSIIPLSKLIDFCVDSEFGDINYADLVLRQIHNP 67
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
SV I WN++IRG+ S PR ++ ++ M G P FT+PFVLKAC I+ + G +
Sbjct: 68 SVYI-WNSMIRGFVNSHNPRMSMLLYRQMIENGYSPDHFTFPFVLKACCVIADQDCGKCI 126
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
+ + KSG ++D YT L+ Y SC + KVFD++ + +VV+W +I V+N
Sbjct: 127 HSCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPKWNVVAWTCLIAGYVKNNQP 186
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG-------TVLN 264
EA+ F M EP+E TM+ L AC ++ G+WVH ++ + G + N
Sbjct: 187 YEALKVFEDMSHWNVEPNEITMVNALIACAHSRDIDTGRWVHQRIRKAGYDPFMSTSNSN 246
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
L TA+++MYAKCG + AR LF++M + N+ +W++MI Q+ +EAL+LF +M
Sbjct: 247 IILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYERHQEALDLFFDMWT 306
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
S + P+ TFL VL C H + G + H GI + D+ A+ G L
Sbjct: 307 SGVYPDKATFLSVLSVCAHQCALALG-QTVHAYLLKTGIATDISLATALLDMYAKTGELG 365
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNE 423
A ++ + + ++ ++++ ++H G GNE
Sbjct: 366 NAQKIFSSLQ-KKDVVMWTSMINGLAMH------GHGNE 397
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 182/570 (31%), Positives = 263/570 (46%), Gaps = 83/570 (14%)
Query: 13 FPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQND----AQILKELVR 68
FPP P LL A LK C ++ +HA VSGL D + +L +R
Sbjct: 16 FPPDP-----HLLPSA------LKSCPAQPLARALHAAAVVSGLAEDPFVASSLLHSYIR 64
Query: 69 FCTLSSS---------KNLTYARSILCNY--------------------VNDSVPIPWNN 99
++ KN+ +++ Y V +V I WN
Sbjct: 65 LGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNV-ITWNG 123
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
L+ G S R +AV + M G P L A ++ ++ G QV V K+G
Sbjct: 124 LVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAG 183
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDD------------------------------ 189
D L+ YG C R + +VF +
Sbjct: 184 CRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFR 243
Query: 190 --MC---ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELG 244
+C E +VVSW I+ CV+N EAV F M+ +G EP+ T+ VL A +
Sbjct: 244 EFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVA 303
Query: 245 NLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMIL 304
L G+ H + +G + + +G+AL+DMYAKCG AR +F M NV +W+AMI
Sbjct: 304 ALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIG 363
Query: 305 GLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIK 364
G A HG A A++LF +M+ P+ VTF VL AC+ AG+ E+G RYF+EM+ HGI
Sbjct: 364 GYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGIS 423
Query: 365 PMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEV 424
P HY M +L R+G L EAY I MPF+P+ + +LL + ++ V E
Sbjct: 424 PRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAE- 482
Query: 425 RRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHR 484
+L +LEP + N V+++N YA MW+ V+ VR MKN+GLKK KG SW+E+ +H
Sbjct: 483 --KLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHM 540
Query: 485 FYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+G +S + I + L L + M L F
Sbjct: 541 LLAGDNSHPMMTAITEKLNQLTIEMNRLGF 570
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
++ + F PD + L +C L + +H + G + + ++L+ Y + GA
Sbjct: 11 LRHVSFPPDPHLLPSALKSCPAQ---PLARALHAAAVVSGLAEDPFVASSLLHSYIRLGA 67
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
G AR +F RM E NV WSA+I G + G AE A L M+++ + PN +T+ G++
Sbjct: 68 TGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSG 127
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKP 365
N +G D M H G P
Sbjct: 128 LNRSGRALDAVTALVRM-HSEGFFP 151
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 153/422 (36%), Positives = 227/422 (53%), Gaps = 34/422 (8%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M+ + P FT FVLKAC ++S + G + K G S+++ N ++ YG C
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVEN-------------------LWLG-------- 212
DA +F+ M +R V+WN++I + W
Sbjct: 61 MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120
Query: 213 ----EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
EA+ F+K++D P+E T++ VL+AC +LG+L LG+ VH + G N +
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVC 180
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
LIDMY KCG + AR +F MEE V +WSAMI GLA HG AEEAL LFS M +
Sbjct: 181 NTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVK 240
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
PN VTF+G+L AC+H G++++G R+F M +G+ P HY + D+ +RAG L+EA+
Sbjct: 241 PNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHE 300
Query: 389 FIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAE 448
FI++MP +PN +V ALL +H K D + E + L EL+P V+++N YAE
Sbjct: 301 FILSMPIKPNGVVWGALLGGCKVH--KNID-LAEEAIKHLSELDPLNDGYYVVISNIYAE 357
Query: 449 VGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLH 508
WE + VR+ MK+ G+KK G S + + G +H F +G + + I +I + L +
Sbjct: 358 AERWEDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVK 417
Query: 509 MK 510
MK
Sbjct: 418 MK 419
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 118/231 (51%), Gaps = 5/231 (2%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
W ++I G+ +P EA+ +F+ ++ ++P E T VL ACA++ L+ G V T
Sbjct: 110 WTSMISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYST 169
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
KSG +V+ N L+ Y C +A +VF +M ER+VVSW+ +I + EA+
Sbjct: 170 KSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALC 229
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLI-ERGTVLNCQLGTALIDMY 275
F +M LG +P+ T + +L AC+ +G + G+ + + G + + ++D++
Sbjct: 230 LFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLF 289
Query: 276 AKCGAVGCA-RLLFSRMEEINVWTWSAMILGLAQH---GYAEEALELFSNM 322
++ G + A + S + N W A++ G H AEEA++ S +
Sbjct: 290 SRAGLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSEL 340
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W+ +I G A + EA+ +F +M + G+KP T+ +L AC+ + ++EG + A+
Sbjct: 209 VSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFAS 268
Query: 155 VT 156
+T
Sbjct: 269 MT 270
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/471 (32%), Positives = 253/471 (53%), Gaps = 39/471 (8%)
Query: 71 TLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEF 130
+ +S L Y+ ++ N SV W +I G+A +A+ + M +G++P F
Sbjct: 18 SYASLGRLDYSVALFGRTQNPSVFF-WTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAF 76
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYG--------------- 175
T+ +LK C + G + + K G DSD+Y L+ Y
Sbjct: 77 TFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTM 132
Query: 176 ------------SCRRKR---DACKV-FDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
+C K DA +V FD M ER V WNV+I +N EA+ F
Sbjct: 133 PEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFR 192
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+M +P+E T+L VLSAC +LG L G+WVH + G N +GTAL+DMY+KCG
Sbjct: 193 RMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCG 252
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
++ ARL+F ++++ +V W++MI+G A G+++EAL+LF +M + P +TF+G+L
Sbjct: 253 SLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILS 312
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
AC H+G V +G+ F++M+ +GI+P HY M ++L RAGH+++AY + NM +P+P
Sbjct: 313 ACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDP 372
Query: 400 IVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVR 459
++ LL A +H + +G ++ L++ S ++++N YA VG W+ V+ +R
Sbjct: 373 VLWGTLLGACRLHG---KIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLR 429
Query: 460 RFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
MK+ G+KK G S +E+ +H F +G + + IY +LE +N +K
Sbjct: 430 TMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLK 480
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 107/251 (42%), Gaps = 38/251 (15%)
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
+ L R Y S R + +F SV W II +A+ ++ +M G E
Sbjct: 13 DKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVE 72
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV------ 281
P+ T +L C + GK +H Q ++ G + + T L+D+YA+ G V
Sbjct: 73 PNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQL 128
Query: 282 -------------------------GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
AR+LF MEE + W+ MI G Q+G EAL
Sbjct: 129 FDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEAL 188
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT-MAD 375
LF M + PN VT L VL AC G +E G R+ H +GI+ +H T + D
Sbjct: 189 VLFRRMLKAKAKPNEVTVLSVLSACGQLGALESG-RWVHSYIENNGIQ-FNVHVGTALVD 246
Query: 376 ILARAGHLKEA 386
+ ++ G L++A
Sbjct: 247 MYSKCGSLEDA 257
>gi|242033621|ref|XP_002464205.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
gi|241918059|gb|EER91203.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
Length = 521
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 169/524 (32%), Positives = 246/524 (46%), Gaps = 51/524 (9%)
Query: 5 PVPTTNHIFPPK-PSNCNSDLLSKARQCLSFLKL-CCSKKHLYQIHAQIQVSGLQNDAQI 62
P PT+ PP PS+ + + L+ L C S HL Q+HA + SGL D
Sbjct: 8 PPPTSTAGSPPLLPSSASISAFIASDPALTLLHTRCASMAHLRQLHAALVKSGLAKDPIA 67
Query: 63 LKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFI 118
V FC ++++YA ++ ++ P P WN +IR + RP AV +F+
Sbjct: 68 ASRAVAFCA-GPGRDVSYAERLVRHH-----PRPNSFMWNTVIRALSDGARPEAAVALFV 121
Query: 119 DMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCR 178
DM P T P +L A A + +G + K GL D Y N + Y SC
Sbjct: 122 DMLGSPTPPERRTLPSLLAAYARLGRAGDGAALHGMALKLGLAGDAYVRNATIAMYASCA 181
Query: 179 RKRDACK-------------------------------VFDDMCERSVVSWNVIITVCVE 207
R +A VFD M ER+V +W+ +++
Sbjct: 182 RADEALALFGQCPEFDAVACNSAIVALARAGRVDEARAVFDGMPERTVATWSAMVSAYAR 241
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
GEA+ F M+ G EP+ ++ VL C LG L G WVH + G +N +
Sbjct: 242 AARCGEALALFSAMQADGVEPNANVLVSVLGCCASLGALDQGAWVHAYIDRHGVAMNALV 301
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEE---INVWTWSAMILGLAQHGYAEEALELFSNMKN 324
TAL+DMY KCG+V AR +F + +W++M+ GLA HG EA+ LFS +++
Sbjct: 302 VTALVDMYCKCGSVDDARQVFDAARSQGSAKLSSWNSMMQGLAVHGQWREAVALFSELRS 361
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+SP+ VTF+ VL A HAGM ++ F M H ++P HY + D LARAG L+
Sbjct: 362 YGLSPDNVTFIAVLTAYGHAGMPDEAQAAFASMATEHSVEPGIEHYGCLVDALARAGRLR 421
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
EA I +MP P+ V ALLS +H DA+ +G R + +PR S V+ A
Sbjct: 422 EAEDAIRSMPMAPDAAVWGALLSGCRLHGDAE----LGARAAREAVRCDPRDSGAYVLAA 477
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYS 487
+ A G + + VR M+ G+ K+ G S +E+ G +H F S
Sbjct: 478 SVLARGGNPGRGAGVRGRMREAGVGKVPGCSMIEVNGVVHEFVS 521
>gi|110741594|dbj|BAE98745.1| hypothetical protein [Arabidopsis thaliana]
Length = 527
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 160/487 (32%), Positives = 260/487 (53%), Gaps = 7/487 (1%)
Query: 27 KARQCLSFLKLCCSKKHLYQIHAQ-IQVSGLQNDAQILKELVRFCTLSSSKN-LTYARSI 84
K ++CL LK C + Q+HA+ I++S + + ++ C S +N + YA SI
Sbjct: 29 KEQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASI 88
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
++D +N +IRGY EA+ + +M +RG +P FTYP +LKAC +
Sbjct: 89 F-RGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKS 147
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
+ EG Q+ V K GL++DV+ N+L+ YG C + VF+ + ++ SW+ +++
Sbjct: 148 IREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSA 207
Query: 205 CVENLWLGEAVGYFVKM-KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
E + F M + + +E+ M+ L AC G L+LG +H L+ + L
Sbjct: 208 RAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISEL 267
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
N + T+L+DMY KCG + A +F +ME+ N T+SAMI GLA HG E AL +FS M
Sbjct: 268 NIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMI 327
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+ P++V ++ VL AC+H+G+V++G R F EM ++P HY + D+L RAG L
Sbjct: 328 KEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLL 387
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
+EA I ++P + N ++ R LS + + +G + LL+L + ++++
Sbjct: 388 EEALETIQSIPIEKNDVIWRTFLSQCRV---RQNIELGQIAAQELLKLSSHNPGDYLLIS 444
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N Y++ MW+ V+ R + GLK+ G S VEL G HRF S S + IY++L
Sbjct: 445 NLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLH 504
Query: 504 TLNLHMK 510
+ +K
Sbjct: 505 QMEWQLK 511
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 179/519 (34%), Positives = 267/519 (51%), Gaps = 47/519 (9%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSS-SKNLTYARSILCNYVN 90
+S L C S L QIHAQ+ + L N + L+ FC+LS S L YA S+ +
Sbjct: 10 VSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQH 69
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKR--RGIKPTEFTYPFVLKACAEISGLNEG 148
+ I + LI+G++ + P E++ ++ M EF+ P VLKAC ++ +EG
Sbjct: 70 PNSFI-FFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDEG 128
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGS------CRRKRD-------------------- 182
QV V K+ L D + N++VR Y RR D
Sbjct: 129 RQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKA 188
Query: 183 -----ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVL 237
A KVF+ M ++ VV+W +I+ V+N +A+ F +M LG PD ++ VL
Sbjct: 189 GEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVL 248
Query: 238 SACTELGNLSLGKWVHLQLIERGTVLNCQ-LGTALIDMYAKCGAVGCARLLFSRMEEI-N 295
SA +LG + GKW+H + L+ +G+ALIDMY+KCG + A +F + N
Sbjct: 249 SAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRN 308
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
+ W++MI GLA HG A EAL++F M+ I PN +TFLG+L C+H G+VE+G YF
Sbjct: 309 IGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFE 368
Query: 356 EMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAK 415
M + I P HY M D+ RAG L++A I NMPF+ + + +A+LSAS H
Sbjct: 369 SMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHG-- 426
Query: 416 YQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSW 475
+G R +EL P S + V+++N YA+ G W+ V+ +R M+ G+KK+ G S
Sbjct: 427 -HIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSS 485
Query: 476 VELGGSIHRFY------SGYDSQVELAGIYQILETLNLH 508
+ + G +H F S Y QV LA I +++ L L
Sbjct: 486 MLVNGKVHEFLLGKELDSSYSGQV-LAKIAEVVSRLKLQ 523
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/422 (34%), Positives = 229/422 (54%), Gaps = 6/422 (1%)
Query: 88 YVNDSVP--IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL 145
+ N P + +N LI G+ + + + F M+++G+ P F + VL C L
Sbjct: 159 FTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENL 218
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
G ++ K LDS + N ++ Y ++A K F + E+ V+SWN +I C
Sbjct: 219 KRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAAC 278
Query: 206 VENLWLGEAVGYFVKM-KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
+ + F M ++ PD+ T L+AC L ++S GK +H L+ +
Sbjct: 279 SHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQD 338
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+G AL++MYAKCG +G A +FS+M N+ +W+ +I G HG E A+ELF M
Sbjct: 339 LGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNA 398
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
S I P+ VTF+G+L ACNHAG+V+ G YF+ ME +GI P H+ + D+L RAG L
Sbjct: 399 SGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLN 458
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
EA ++ PF +P+VL +LLSAS +H +G + + LL+L+P + V+++N
Sbjct: 459 EAEEYMRKFPFWNDPVVLVSLLSASRLHGDVV---IGERLAKWLLKLQPVTTSPYVLLSN 515
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILET 504
YA GMW+ V+ R+ +K GLKK G S +E+ GS+ +F G + + + I IL+T
Sbjct: 516 LYASDGMWDSVAEARKRLKGSGLKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKT 575
Query: 505 LN 506
L+
Sbjct: 576 LS 577
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 149/313 (47%), Gaps = 10/313 (3%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S L C K L +HA + +G Q+D + ++ + + T+AR +
Sbjct: 8 SLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNM--YAKCGHTTFARQVFDEMF 65
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
++ + W+ +I GY + P+ A+ ++ M + P E+ + V+ ACA +S + G
Sbjct: 66 EKNL-VSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
++ + K G +S + +N+L+ Y C + DA VF + E + VS+N +IT VEN
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
L + +F M+ G PD + VL CT NL G +H Q ++ +G
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM-KNSSIS 328
+I MY++ + A F +EE +V +W+ +I + + L +F +M + +++
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVR 301
Query: 329 PNYVTFLGVLCAC 341
P+ TF L AC
Sbjct: 302 PDDFTFTSALAAC 314
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 3/212 (1%)
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
T +L C++ L G+ + A V K+G SDV+ +N+++ Y C A +VFD+M
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
E+++VSW+ +I+ + A+ + +M P+E V+SAC L ++LG+
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
+H + ++ G + +LI MY KC A +F+ E N +++A+I G ++
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
E LE F M+ + P+ F+GVL C
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICT 213
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 5/177 (2%)
Query: 232 TMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM 291
T+ +L C++ L G +H +++ GT + + +++MYAKCG AR +F M
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 292 EEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGY 351
E N+ +WSAMI G Q G + A++L+S M + PN F V+ AC V G
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQM---FLVPNEYVFASVISACASLSAVTLGQ 121
Query: 352 RYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
+ H G + + +++ + + +A + N P +PN + AL++
Sbjct: 122 K-IHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTP-EPNCVSYNALITG 176
>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 173/493 (35%), Positives = 253/493 (51%), Gaps = 12/493 (2%)
Query: 15 PKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSS 74
P P N +S+ + R C+ L + + Q+HA++ VSG DA + LV +S
Sbjct: 63 PSPYN-HSNYATILRSCV----LSRAVRPGRQLHARLLVSGTGLDAVLATRLVDL--YAS 115
Query: 75 SKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRG-IKPTEFTYP 133
+++ AR + N WN LIR YA A+ ++ M G +KP FTYP
Sbjct: 116 CGHVSLARRVFDEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYP 175
Query: 134 FVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER 193
VLKACA + L+ G +V V ++ +DV+ L+ Y C +A VF+D R
Sbjct: 176 PVLKACAALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIR 235
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
WN +I C +N EA+ M G P T++ +SA L G+ +H
Sbjct: 236 DAAVWNSMIAACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELH 295
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
RG +L T+L+DMYAK G V A +LF ++ + +W+AMI G HG+A+
Sbjct: 296 GYGWRRGFGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHAD 355
Query: 314 EALELFSNMKN-SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
A ELFS M++ + + P+++TF+GVL ACNH GMV++ F M V+ IKP HY
Sbjct: 356 HAFELFSRMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTC 415
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELE 432
+ D+L +G KEA I M +P+ + ALL+ IH + ++L+ELE
Sbjct: 416 LVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHK---NVELAELALQKLIELE 472
Query: 433 PRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQ 492
P + N V+++N YAE G WE+ + VR+ M N GLKK+ SW+EL G H F G S
Sbjct: 473 PEDAGNYVLLSNIYAESGKWEEAARVRKLMTNRGLKKIIACSWIELKGKFHGFLVGDASH 532
Query: 493 VELAGIYQILETL 505
IY+ LE L
Sbjct: 533 PRSDDIYEELERL 545
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/425 (34%), Positives = 230/425 (54%), Gaps = 6/425 (1%)
Query: 85 LCNYVNDSVP--IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI 142
L + N P + +N LI G+ + + + F M+++G+ P F + VL C
Sbjct: 156 LSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTT 215
Query: 143 SGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII 202
L G ++ K LDS + N ++ Y ++A K F + E+ V+SWN +I
Sbjct: 216 ENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLI 275
Query: 203 TVCVENLWLGEAVGYFVKM-KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGT 261
C + + F M ++ PD+ T L+AC L ++S GK +H L+
Sbjct: 276 AACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRL 335
Query: 262 VLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSN 321
+ +G AL++MYAKCG +G A +FS+M N+ +W+ +I G HG E A+ELF
Sbjct: 336 YQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQ 395
Query: 322 MKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAG 381
M S I P+ VTF+G+L ACNHAG+V+ G YF+ ME +GI P H+ + D+L RAG
Sbjct: 396 MNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAG 455
Query: 382 HLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVI 441
L EA ++ PF +P+VL +LLSAS +H +G + + LL+L+P + V+
Sbjct: 456 RLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVV---IGERLAKWLLKLQPVTTSPYVL 512
Query: 442 VANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQI 501
++N YA GMW+ V+ R+ +K GLKK G S +E+ GS+ +F G + + + I I
Sbjct: 513 LSNLYASDGMWDSVAEARKRLKGSGLKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGI 572
Query: 502 LETLN 506
L+TL+
Sbjct: 573 LKTLS 577
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 149/313 (47%), Gaps = 10/313 (3%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S L C K L +HA + +G Q+D + ++ + + T+AR +
Sbjct: 8 SLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNM--YAKCGHTTFARQVFDEMF 65
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
++ + W+ +I GY + P+ A+ ++ M + P E+ + V+ ACA +S + G
Sbjct: 66 EKNL-VSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
++ + K G +S + +N+L+ Y C + DA VF + E + VS+N +IT VEN
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
L + +F M+ G PD + VL CT NL G +H Q ++ +G
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM-KNSSIS 328
+I MY++ + A F +EE +V +W+ +I + + L +F +M + +++
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVR 301
Query: 329 PNYVTFLGVLCAC 341
P+ TF L AC
Sbjct: 302 PDDFTFTSALAAC 314
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 3/212 (1%)
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
T +L C++ L G+ + A V K+G SDV+ +N+++ Y C A +VFD+M
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
E+++VSW+ +I+ + A+ + +M P+E V+SAC L ++LG+
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
+H + ++ G + +LI MY KC A +F+ E N +++A+I G ++
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
E LE F M+ + P+ F+GVL C
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICT 213
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 5/177 (2%)
Query: 232 TMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM 291
T+ +L C++ L G +H +++ GT + + +++MYAKCG AR +F M
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 292 EEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGY 351
E N+ +WSAMI G Q G + A++L+S M + PN F V+ AC V G
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQM---FLVPNEYVFASVISACASLSAVTLGQ 121
Query: 352 RYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
+ H G + + +++ + + +A + N P +PN + AL++
Sbjct: 122 K-IHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTP-EPNCVSYNALITG 176
>gi|223946989|gb|ACN27578.1| unknown [Zea mays]
gi|414586292|tpg|DAA36863.1| TPA: hypothetical protein ZEAMMB73_743648 [Zea mays]
Length = 545
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 167/518 (32%), Positives = 253/518 (48%), Gaps = 54/518 (10%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
++ L+ C + + L + H L + + ++V C V
Sbjct: 14 IARLRTCATFRDLLRAHGLAVRLCLSQSSYVATQIVHICNAHGRAAHA-------ARVFA 66
Query: 92 SVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPT--------EFTYPFVLKAC 139
+P P N +I+ YA + R+AV V++ M R P+ FTYPF+LKAC
Sbjct: 67 QIPAPNLHLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPHPSTAGFSVGDRFTYPFLLKAC 126
Query: 140 AEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWN 199
++ G QV A+V +SG +S N+L+ Y C A K FD M E+ VVSWN
Sbjct: 127 GALAASRLGRQVHAHVARSGCESHAVVQNSLIEMYTRCGDLSTARKAFDGMREKDVVSWN 186
Query: 200 VIITVCVENLWLGEAVGYFVKMKDL-------------------------------GFEP 228
+I+ + A F M D GFEP
Sbjct: 187 TLISAHARMGQMRRARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEVFRLMQMEGFEP 246
Query: 229 DETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLF 288
D+ +++ VL AC +LG L LG+W++ + G + + AL++MYAKCG + A LF
Sbjct: 247 DDVSIVAVLPACAQLGALELGRWIYAYCSKHGMLGKVYICNALMEMYAKCGCIEEALQLF 306
Query: 289 SRMEEINVWTWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGMV 347
M E +V +WS I GLA HG A EA+ LF M + + PN +TF+G+L AC+HAG+V
Sbjct: 307 HGMSEKDVISWSTAIGGLAAHGRAREAVRLFEVMDREGRVMPNGITFVGLLSACSHAGLV 366
Query: 348 EDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLS 407
++G RY +M+ +G++P HY + D+L R+G ++ A I MP P+ + +LLS
Sbjct: 367 DEGLRYLDQMKEDYGVEPGVEHYGCVVDLLGRSGRIQRALDTIRGMPVPPDGKIWGSLLS 426
Query: 408 ASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGL 467
A H V E RL+ELEP NLV++AN Y G W +V++ R+ +++
Sbjct: 427 ACRSHGDVETAVVAAE---RLVELEPGDVGNLVMLANVYGAAGRWGEVASTRKEIRSRST 483
Query: 468 KKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+K G S +E+ + F +G D EL GI +L+ L
Sbjct: 484 RKTPGCSMIEVDNVVREFVAGQDLGPELGGIATVLDIL 521
>gi|15222513|ref|NP_174474.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169173|sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920
gi|12321292|gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193295|gb|AEE31416.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/487 (32%), Positives = 260/487 (53%), Gaps = 7/487 (1%)
Query: 27 KARQCLSFLKLCCSKKHLYQIHAQ-IQVSGLQNDAQILKELVRFCTLSSSKN-LTYARSI 84
K ++CL LK C + Q+HA+ I++S + + ++ C S +N + YA SI
Sbjct: 29 KEQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASI 88
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
++D +N +IRGY EA+ + +M +RG +P FTYP +LKAC +
Sbjct: 89 F-RGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKS 147
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
+ EG Q+ V K GL++DV+ N+L+ YG C + VF+ + ++ SW+ +++
Sbjct: 148 IREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSA 207
Query: 205 CVENLWLGEAVGYFVKM-KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
E + F M + + +E+ M+ L AC G L+LG +H L+ + L
Sbjct: 208 RAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISEL 267
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
N + T+L+DMY KCG + A +F +ME+ N T+SAMI GLA HG E AL +FS M
Sbjct: 268 NIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMI 327
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+ P++V ++ VL AC+H+G+V++G R F EM ++P HY + D+L RAG L
Sbjct: 328 KEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLL 387
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
+EA I ++P + N ++ R LS + + +G + LL+L + ++++
Sbjct: 388 EEALETIQSIPIEKNDVIWRTFLSQCRV---RQNIELGQIAAQELLKLSSHNPGDYLLIS 444
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N Y++ MW+ V+ R + GLK+ G S VEL G HRF S S + IY++L
Sbjct: 445 NLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLH 504
Query: 504 TLNLHMK 510
+ +K
Sbjct: 505 QMEWQLK 511
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/448 (34%), Positives = 231/448 (51%), Gaps = 34/448 (7%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W+ LI + ++ EA+ F+ M + G+ E L ACA + +N G + +
Sbjct: 342 VTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSL 401
Query: 155 VTKSGLDSDVYTNNNLVRFYGSC------RRKRD-------------------------A 183
K G +S + N L+ Y C R+ D A
Sbjct: 402 SLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNA 461
Query: 184 CKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
+FD M E+ VVSW+ +I+ +N E + F +M+ GF+PDETT++ V+SAC L
Sbjct: 462 KAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARL 521
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
L GKWVH + G +N LGT LIDMY KCG V A +F M E + TW+A+I
Sbjct: 522 AALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALI 581
Query: 304 LGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
LGLA +G E +L++FSNMK ++PN +TF+GVL AC H G+V++G +F+ M H H I
Sbjct: 582 LGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKI 641
Query: 364 KPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNE 423
+P HY M D+L RAG L+EA + MP P+ ALL A H +G
Sbjct: 642 QPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHG---DSEMGRR 698
Query: 424 VRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIH 483
V R+L+EL+P V+++N YA G W+ V +R M + K+ G S +E G IH
Sbjct: 699 VGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIH 758
Query: 484 RFYSGYDSQVELAGIYQILETLNLHMKV 511
F +G + ++ I +L + + +K+
Sbjct: 759 EFLAGDKTHPDMDAIEDMLVEMAMKLKL 786
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 155/382 (40%), Gaps = 80/382 (20%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSV---PIPWNNLIR 102
Q+H + G +D + L+ ++ S N+T A C N+S + WN+++
Sbjct: 234 QVHNHVLKLGFDSDVYVRNTLINCFSVCS--NMTDA----CRVFNESSVLDSVSWNSILA 287
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
GY EA ++ M R I
Sbjct: 288 GYIEIGNVEEAKHIYHQMPERSI------------------------------------- 310
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
+N+++ +G +ACK+FD+M E+ +V+W+ +I +N EA+ FV M
Sbjct: 311 --IASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMH 368
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
+G DE + LSAC L +++GK +H ++ GT L ALI MY+KCG +
Sbjct: 369 KIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIM 428
Query: 283 CARLLFSR-------------------------------MEEINVWTWSAMILGLAQHGY 311
AR LF M E +V +WS+MI G AQ+
Sbjct: 429 VARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDL 488
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
+E L LF M+ S P+ T + V+ AC +E G ++ H +G+ I
Sbjct: 489 FDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQG-KWVHAYIKRNGLTINVILGT 547
Query: 372 TMADILARAGHLKEAYTFIMNM 393
T+ D+ + G ++ A M
Sbjct: 548 TLIDMYMKCGCVETALEVFYGM 569
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 117/240 (48%), Gaps = 12/240 (5%)
Query: 86 CNYVN------DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFV 135
CN V+ DS+P + W+++I GYA +D E + +F +M+ G KP E T V
Sbjct: 455 CNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSV 514
Query: 136 LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSV 195
+ ACA ++ L +G V A + ++GL +V L+ Y C A +VF M E+ +
Sbjct: 515 ISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGI 574
Query: 196 VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQ 255
+WN +I N + ++ F MK P+E T + VL AC +G + G+
Sbjct: 575 STWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYS 634
Query: 256 LIERGTVL-NCQLGTALIDMYAKCGAVGCARLLFSRMEEI-NVWTWSAMILGLAQHGYAE 313
+I + N + ++D+ + G + A L +RM +V TW A++ +HG +E
Sbjct: 635 MIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSE 694
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 106/249 (42%), Gaps = 39/249 (15%)
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
R Y ++ P A ++ M + +TYP +++AC+ E QV +V K G D
Sbjct: 186 RAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFD 245
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
SDVY N L+ + C DAC+VF++ VSWN I+ GY
Sbjct: 246 SDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILA------------GYI--- 290
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
E+GN+ K ++ Q+ ER + + ++I ++ G V
Sbjct: 291 --------------------EIGNVEEAKHIYHQMPERSIIAS----NSMIVLFGMRGLV 326
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
A LF M E ++ TWSA+I Q+ EEA+ F M + + V + L AC
Sbjct: 327 VEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSAC 386
Query: 342 NHAGMVEDG 350
+ +V G
Sbjct: 387 ANLLVVNMG 395
>gi|297811669|ref|XP_002873718.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319555|gb|EFH49977.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 548
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 165/507 (32%), Positives = 267/507 (52%), Gaps = 72/507 (14%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW 97
C + + L QIHA + V+GL ++ ++ EL+ +LS L YA + V I
Sbjct: 22 CKNFRTLMQIHAFMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFEEIPKPDVSIC- 80
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N+++RG A S +P + V ++ +M++RG+ P +T+ FVLKAC+++ + G + V +
Sbjct: 81 NHVLRGSAQSLKPEKTVALYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAIHGKVVR 140
Query: 158 SGLDSDVYTNNNLVRFYGSC------------------------------RRKRD-ACKV 186
G + Y N L+ F+ +C R K D A ++
Sbjct: 141 HGFLLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRL 200
Query: 187 FDDMCERSVVSWNVIITVCVE----------------------NLWLG---------EAV 215
FD+M ++ V+WNV+IT C++ N + EA+
Sbjct: 201 FDEMPDKDQVAWNVMITGCLKCREMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEAL 260
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-----LNCQLGTA 270
F +M+D G PD T+L +LSAC LG+L GK +H+ ++E +V + + A
Sbjct: 261 SIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNA 320
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
LIDMYAKCG++ A +F M++ ++ TW+ +I+GLA H +AE ++E+F M+ + PN
Sbjct: 321 LIDMYAKCGSIDRAIEVFRGMKDRDLSTWNTLIVGLALH-HAEGSVEMFEEMQRLKVWPN 379
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
VTF+GV+ AC+H+G V++G +YF M ++ I+P HY M D+L RAG L+EA+ F+
Sbjct: 380 EVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGLLEEAFMFV 439
Query: 391 MNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVG 450
+M +PN IV R LL A I+ NE +LL + S + V+++N YA G
Sbjct: 440 ESMKIEPNAIVWRTLLGACKIYGNVELGKYANE---KLLSMRKDESGDYVLLSNIYASTG 496
Query: 451 MWEKVSNVRRFMKNVGLKKMKGMSWVE 477
W+ V VR+ + +KK G+S +E
Sbjct: 497 QWDGVQKVRKMFDDTRVKKPTGISLIE 523
>gi|356518836|ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 568
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/468 (34%), Positives = 246/468 (52%), Gaps = 13/468 (2%)
Query: 42 KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLT--YARSILCNYVNDSVPIPWNN 99
K +Y +HA + + ++ L+ + C SSS T YA ++L + P P+N
Sbjct: 10 KSVYNLHATLIKNAQHDNPLSLRTFILRCANSSSPPDTARYAAAVLLRFPIPGDPFPYNA 69
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
+IR A P A+ +F M R + FT+P +LK+ S LN + V K G
Sbjct: 70 VIRHVALH-APSLALALFSHMHRTNVPFDHFTFPLILKS----SKLNPHC-IHTLVLKLG 123
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
S++Y N L+ YG+ + K+FD+M R ++SW+ +I+ + EA+ F
Sbjct: 124 FHSNIYVQNALINSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKRGLPDEALTLFQ 183
Query: 220 KM--KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
+M K+ PD ML V+SA + LG L LG WVH + G L LG+ALIDMY++
Sbjct: 184 QMQLKESDILPDGVVMLSVISAVSSLGALELGIWVHAFISRIGVNLTVSLGSALIDMYSR 243
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CG + + +F M NV TW+A+I GLA HG EALE F +M S + P+ + F+GV
Sbjct: 244 CGDIDRSVKVFDEMPHRNVVTWTALINGLAVHGRGREALEAFYDMVESGLKPDRIAFMGV 303
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
L AC+H G+VE+G R F M +GI+P HY M D+L RAG + EA+ F+ M +P
Sbjct: 304 LVACSHGGLVEEGRRVFSSMWSEYGIEPALEHYGCMVDLLGRAGMVLEAFDFVEGMRVRP 363
Query: 398 NPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSN 457
N ++ R LL A H+ + + + R+ EL+P + V+++N Y VG W K
Sbjct: 364 NSVIWRTLLGACVNHNLLV---LAEKAKERIKELDPHHDGDYVLLSNAYGGVGNWVKKEG 420
Query: 458 VRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
VR M+ + K G+S V + H F SG +S + I + L ++
Sbjct: 421 VRNSMRESKIVKEPGLSLVHIDQVAHEFVSGDNSHPQWEEITRFLGSV 468
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 164/500 (32%), Positives = 256/500 (51%), Gaps = 38/500 (7%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
IH + + +D I L+ F SS +L A + V + + WN++I G+
Sbjct: 153 IHGMVMKASFGSDLFISNSLIHF--YSSLGDLDSAYLVFSKIVEKDI-VSWNSMISGFVQ 209
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
P EA+ +F MK +P T VL ACA+ L G + ++G+D ++
Sbjct: 210 GGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLIL 269
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSW---------------------------- 198
+N ++ Y C DA ++FD M E+ +VSW
Sbjct: 270 SNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDI 329
Query: 199 ---NVIITVCVENLWLGEAVGYFVKMK-DLGFEPDETTMLVVLSACTELGNLSLGKWVHL 254
N +I+ +N EA+ F +++ + +P+E T+ L+AC +LG + LG W+H+
Sbjct: 330 TAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHV 389
Query: 255 QLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEE 314
+ ++G LN + T+LIDMY+KCG + A +F +E +V+ WSAMI GLA HG+
Sbjct: 390 YIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRA 449
Query: 315 ALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMA 374
A++LFS M+ + + PN VTF +LCAC+H+G+V++G +F++M V+G+ P HY M
Sbjct: 450 AIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMV 509
Query: 375 DILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPR 434
DIL RAG L+EA I MP P+ V ALL A I+ + RLLE +
Sbjct: 510 DILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYG---NVELAEMACSRLLETDSN 566
Query: 435 GSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVE 494
V+++N YA+ G W+ VS +R+ MK GL+K G S +E+ G IH F G +S
Sbjct: 567 NHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPL 626
Query: 495 LAGIYQILETLNLHMKVLNF 514
IY L+ + +K +
Sbjct: 627 STEIYSKLDEIVARIKSTGY 646
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 193/387 (49%), Gaps = 45/387 (11%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP- 96
C +KKHL Q+HA + +GL D +L C LSS +L YA + D +P P
Sbjct: 40 CANKKHLKQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVF-----DQIPRPN 94
Query: 97 ---WNNLIRGYAWSDRPREAVWVFIDMKRRGIK-PTEFTYPFVLKACAEISGLNEGMQVQ 152
WN LIR +A S +P + + VFI M + P +T+PFV+KA E+S L G +
Sbjct: 95 LYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIH 154
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
V K+ SD++ +N+L+ FY S A VF + E+ +VSWN +I+ V+
Sbjct: 155 GMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPE 214
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
EA+ F +MK P+ TM+ VLSAC + +L G+W + G +N L A++
Sbjct: 215 EALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAML 274
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA------------------------- 307
DMY KCG++ AR LF +MEE ++ +W+ MI G A
Sbjct: 275 DMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNA 334
Query: 308 ------QHGYAEEALELFSNMK-NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHV 360
Q+G +EAL +F ++ N + PN VT L AC G ++ G + H
Sbjct: 335 LISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLG-GWIHVYIKK 393
Query: 361 HGIKPMRIHYHT-MADILARAGHLKEA 386
GIK + H T + D+ ++ GHL++A
Sbjct: 394 QGIK-LNFHITTSLIDMYSKCGHLEKA 419
>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 182/529 (34%), Positives = 255/529 (48%), Gaps = 48/529 (9%)
Query: 22 SDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYA 81
S L+SK C++ + QIH + GL IL +L+R T YA
Sbjct: 50 SSLISKLDDCINL-------NQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYA 102
Query: 82 RSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAE 141
R ++ V P W +IRGYA + EA+ ++ M++ I P FT+ +LKAC
Sbjct: 103 RRVI-EPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 142 ISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVI 201
+ LN G Q A + VY N ++ Y C A KVFD+M ER V+SW +
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 202 ITV--------CVENL-----------WLG------------EAVGYFVKMKDLGFEPDE 230
I C L W EA+ YF +M+ G DE
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 231 TTMLVVLSACTELGNLSLGKWVHLQLIERGTVL---NCQLGTALIDMYAKCGAVGCARLL 287
T+ +SAC +LG +Q+ ++ + +G+ALIDMY+KCG V A +
Sbjct: 282 VTVAGYISACAQLGASKYADRA-VQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNV 340
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGM 346
F M NV+T+S+MILGLA HG A+EAL LF M + I PN VTF+G L AC+H+G+
Sbjct: 341 FMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGL 400
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALL 406
V+ G + F M G++P R HY M D+L R G L+EA I M +P+ V ALL
Sbjct: 401 VDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALL 460
Query: 407 SASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVG 466
A IH+ + E L ELEP N ++++N YA G W V VR+ +K G
Sbjct: 461 GACRIHNNPEIAEIAAE---HLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKG 517
Query: 467 LKKMKGMSW-VELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
LKK +SW V+ G +H+F+ G + I LE L + VL +
Sbjct: 518 LKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGY 566
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 184/540 (34%), Positives = 262/540 (48%), Gaps = 61/540 (11%)
Query: 23 DLLSKARQCLSFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLT 79
D + A S L C S+K Q+HA + S +D I LV
Sbjct: 142 DFVLNAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDM---------- 191
Query: 80 YA---RSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
YA R V D++P + WN+LI Y + EA+ +F+ M + G P E T
Sbjct: 192 YAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTL 251
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSG-LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
V+ ACA ++ EG QV + KS D+ NN LV Y C R +A VFD M
Sbjct: 252 ASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMA 311
Query: 192 ERSVVS-------------------------------WNVIITVCVENLWLGEAVGYFVK 220
RSVVS WNV+I N EA+ FV+
Sbjct: 312 IRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVR 371
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ------LGTALIDM 274
+K P T VL+AC L NL LG+ H+ +++ G + +G +L+DM
Sbjct: 372 LKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDM 431
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y K G++ +F RM + +W+AMI+G AQ+G A++AL LF M S+ P+ VT
Sbjct: 432 YLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTM 491
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+GVL AC H+G+V++G RYF M HGI P R HY M D+L RAGHLKE I NMP
Sbjct: 492 IGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMP 551
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
+P+ ++ +LL A +H K D +G +L EL+P S V+++N YAE+G W
Sbjct: 552 MEPDAVLWASLLGACRLH--KNID-MGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWAD 608
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
V VRR MK+ G+ K G SW+E+G ++ F + + I+ L + + M ++
Sbjct: 609 VFRVRRSMKHRGVSKQPGCSWIEIGRKVNVFLARDNIHPCRNEIHDTLRIIQMQMSRMSI 668
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 144/309 (46%), Gaps = 41/309 (13%)
Query: 92 SVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
++P P +N ++ A R +A+ M +++ L ACA
Sbjct: 106 AIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRT 165
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G QV A VTKS SDVY LV Y C R +A KVFD M ER++VSWN +IT +
Sbjct: 166 GEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQ 225
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQ 266
N + EA+ FV+M GF PDE T+ V+SAC L G+ VH ++++ +
Sbjct: 226 NGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMV 285
Query: 267 LGTALIDMYAKCGA-------------------------------VGCARLLFSRMEEIN 295
L AL+DMYAKCG VG A+ +F +M E N
Sbjct: 286 LNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKN 345
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
V W+ +I A + EEAL LF +K S+ P + T+ VL AC + ++ G
Sbjct: 346 VVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLG----- 400
Query: 356 EMEHVHGIK 364
+ HVH +K
Sbjct: 401 QQAHVHVLK 409
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 121/282 (42%), Gaps = 11/282 (3%)
Query: 130 FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD 189
F +L A A + L++ +V + + ++ N L+ R DA +F
Sbjct: 51 FLLNTLLSAYARLGSLHDARRVFDGMPHR----NTFSYNALLSACARLGRADDALALFGA 106
Query: 190 MCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
+ + S+N ++ ++ G+A+ + M F + + LSAC G
Sbjct: 107 IPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTG 166
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
+ VH + + + +GTAL+DMYAKC A+ +F M E N+ +W+++I Q+
Sbjct: 167 EQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQN 226
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIH 369
G +EAL LF M P+ VT V+ AC +G + M + +
Sbjct: 227 GPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVL 286
Query: 370 YHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSI 411
+ + D+ A+ G EA M +R+++S +S+
Sbjct: 287 NNALVDMYAKCGRTWEAKCVFDRM-------AIRSVVSETSM 321
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/413 (37%), Positives = 227/413 (54%), Gaps = 7/413 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACA--EISGLNEGMQVQ 152
I WN++I GY+ EA+ +F +M + G++ + T +LK+ A + +G E QV
Sbjct: 356 IVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCE--QVH 413
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
KSG D Y N+L+ YG C DA KVF+ +V++ +IT +
Sbjct: 414 TISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGE 473
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
EA+ +++M+D +PD + +AC L GK +H+ +++ G + + G +L+
Sbjct: 474 EALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLV 533
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
+MYAKCG++ A +F+ + + +WSAMI GLAQHG+ +AL+LF M + I PN++
Sbjct: 534 NMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHI 593
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
T + VL ACNHAG+V + R+F ME + GI P + HY M DIL R G L EA +
Sbjct: 594 TLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKE 653
Query: 393 MPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMW 452
MPFQ + V ALL A+ IH +G LL LEP S +++AN YA GMW
Sbjct: 654 MPFQASAAVWGALLGAARIHK---NIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMW 710
Query: 453 EKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+ V+ VRR MKN +KK GMSW+EL ++ F G S IY L+ L
Sbjct: 711 DNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDL 763
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 121/251 (48%), Gaps = 11/251 (4%)
Query: 114 VWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRF 173
V + +M GI P EF+ VL ACA + N GM+V + K G DSD ++ N L+
Sbjct: 173 VALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDM 232
Query: 174 YGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTM 233
Y A VF ++ + +VSWN +I CV + A+ KM P T+
Sbjct: 233 YAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTL 292
Query: 234 LVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEE 293
L AC +G + LG+ +H L++ + +G LIDMY+KCG + AR++F M
Sbjct: 293 SSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPX 352
Query: 294 INVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL-----------CACN 342
+V W+++I G + GY EA+ LF+NM + N T +L C
Sbjct: 353 KDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQV 412
Query: 343 HAGMVEDGYRY 353
H ++ GY+Y
Sbjct: 413 HTISIKSGYQY 423
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 164/375 (43%), Gaps = 23/375 (6%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I G ++ A+ + M + P+ FT LKACA I + G Q+ +
Sbjct: 255 VSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSA 314
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ K ++ D + L+ Y C +DA VFD M + V+ WN II+ + EA
Sbjct: 315 LMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEA 374
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F M G E ++TT+ +L + + VH I+ G + + +L+D
Sbjct: 375 MSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDS 434
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y KC + A +F ++ +++MI +Q+G EEAL+++ M++ I P+ F
Sbjct: 435 YGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIF 494
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVH----GIKPMRIHYHTMADILARAGHLKEAYTFI 390
+ AC + E G + HVH G+ +++ ++ A+ G + +A
Sbjct: 495 SSLFNACANLSAYEQGKQI-----HVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIF 549
Query: 391 MNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG----SQNLVIVANKY 446
N I R ++S S++ Q G G + + ++ G LV V +
Sbjct: 550 -------NEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSAC 602
Query: 447 AEVGMWEKVSNVRRF 461
G+ V+ RRF
Sbjct: 603 NHAGL---VTEARRF 614
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 138/319 (43%), Gaps = 45/319 (14%)
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
YP +L ++ GM + A + + GL NL Y C+ R A K+ D
Sbjct: 53 YPKLLLQFTASKDVSSGMAIHARIIRLGLLGLRNRLVNL---YSKCQCFRVARKLVIDSS 109
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
E +VSW+ +I+ V+N EA+ + +M LG + +E T VL C+ NL LGK
Sbjct: 110 EPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQ 169
Query: 252 VH-----LQLIERG---------TVLNCQLG--------------------------TAL 271
+H ++I G TVLN G AL
Sbjct: 170 IHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANAL 229
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
+DMYAK G A +F + + ++ +W+A+I G H + AL+L M + ++P+
Sbjct: 230 LDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSM 289
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
T L AC G+V+ G R H ++P + D+ ++ G L++A
Sbjct: 290 FTLSSALKACAAIGLVKLG-RQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFD 348
Query: 392 NMPFQPNPIVLRALLSASS 410
MP + + IV +++S S
Sbjct: 349 LMPXK-DVIVWNSIISGYS 366
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/417 (35%), Positives = 241/417 (57%), Gaps = 5/417 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
IPW+ +I +A S + +A+ +F M+R + P +FT+ VL+A A+I L+ + +
Sbjct: 214 IPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGH 273
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE- 213
K+GL +DV+ +N L+ Y C + ++F+ + +R+ VSWN II V+ L GE
Sbjct: 274 ALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQ-LGDGER 332
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
A+ F M + E T +L AC L L LG VH + + +G ALID
Sbjct: 333 ALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALID 392
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MYAKCG++ AR +F ++ + +W+A+I G + HG EA+++F+ MK + P+ +T
Sbjct: 393 MYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELT 452
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
F+GVL AC++ G +++G +YF M+ +GI+P HY M ++ R+G+L +A FI ++
Sbjct: 453 FVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDI 512
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
PF+P+ ++ RALL A IH+ +G +R+LELEPR + V+++N YA W
Sbjct: 513 PFEPSVMIWRALLGACVIHN---DVELGRISAQRVLELEPRDEASHVLLSNIYARARRWG 569
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
V+ VR+ MK G+KK G+SW+E G++H F S +L I +LE LN+ +
Sbjct: 570 NVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADLKLINGMLEFLNMKTR 626
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 165/346 (47%), Gaps = 15/346 (4%)
Query: 73 SSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
S S ++ AR + + ++ + W +I YA +D EA+ F M+ G KP FT+
Sbjct: 92 SVSGCVSMAREVF-DEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTF 150
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
VLKAC + + G V +V K+ + D+Y L+ Y C DA + F DM +
Sbjct: 151 AGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPK 210
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
V+ W+ +I+ ++ +A+ F +M+ P++ T VL A ++ +L L K +
Sbjct: 211 NDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTI 270
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H ++ G + + AL+ YAKCG + + LF + + N +W+ +I+ Q G
Sbjct: 271 HGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDG 330
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
E AL LFSNM + VT+ +L AC +E G + VH + I+
Sbjct: 331 ERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQ-------VHCLTAKTIYGQD 383
Query: 373 MA------DILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
+A D+ A+ G +K+A F+ +M + + A++ S+H
Sbjct: 384 VAVGNALIDMYAKCGSIKDA-RFMFDMLDLRDKVSWNAIICGYSMH 428
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 124/256 (48%), Gaps = 4/256 (1%)
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D +P + + LI GYA S++ EA +F + G + F + VLK +
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
G V V K G S+ + L+ Y A +VFD++ + +VSW +I
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
EN EA+ +F +M+ GF+P+ T VL AC L N GK VH +++ +
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+G L+++Y +CG A F M + +V WS MI AQ G +E+ALE+F M+
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRR 241
Query: 325 SSISPNYVTFLGVLCA 340
+ + PN TF VL A
Sbjct: 242 AFVIPNQFTFSSVLQA 257
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 82/162 (50%)
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
++D + WN +I Y A+ +F +M R ++ TE TY +L+ACA ++ L G
Sbjct: 309 LSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELG 368
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
+QV K+ DV N L+ Y C +DA +FD + R VSWN II +
Sbjct: 369 LQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMH 428
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
EA+ F MK+ +PDE T + VLSAC+ G L GK
Sbjct: 429 GLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGK 470
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 80/156 (51%)
Query: 186 VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGN 245
VFD+M ER+ VS+ +I ++ EA F ++ G E + VL +
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
LG+ VH +++ G N +GTALID Y+ G V AR +F + ++ +W+ MI
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
A++ EALE FS M+ + PN TF GVL AC
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKAC 157
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 164/479 (34%), Positives = 242/479 (50%), Gaps = 18/479 (3%)
Query: 35 LKLCCSKKHLYQI----HAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
LK C H + + H+ + +G D + LV C S + LT AR +
Sbjct: 108 LKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLV--CLYSKNGFLTDARKVF----- 160
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P + W +I GY S EA+ +F + G++P FT +L AC+ + L
Sbjct: 161 DEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLA 220
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G + + +SG +V+ +LV Y C +A +VFD M E+ VV W+ +I
Sbjct: 221 SGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYA 280
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
N EA+ F +M+ PD M+ V SAC+ LG L LG W + + N
Sbjct: 281 SNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPV 340
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
LGTALID YAKCG+V A+ +F M + ++A+I GLA G+ A +F M
Sbjct: 341 LGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVG 400
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+ P+ TF+G+LC C HAG+V+DG+RYF M V + P HY M D+ ARAG L EA
Sbjct: 401 MQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEA 460
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKY 446
I +MP + N IV ALL +H + V ++L+ELEP S + V+++N Y
Sbjct: 461 QDLIRSMPMEANSIVWGALLGGCRLHK---DTQLAEHVLKQLIELEPWNSGHYVLLSNIY 517
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+ W++ +R + G++K+ G SWVE+ G +H F G S IY+ LE+L
Sbjct: 518 SASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLESL 576
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 113/310 (36%), Positives = 174/310 (56%), Gaps = 12/310 (3%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP----WNNLI 101
Q H + GL D ++ L+R +L +A + V P P +N LI
Sbjct: 21 QCHCLLLRLGLHQDTYLINLLLR-------SSLHFAATQYATVVFAQTPHPNIFLYNTLI 73
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG-LNEGMQVQANVTKSGL 160
RG +D R+AV V+ M++ G P FT+PFVLKAC + + G+ + + V K+G
Sbjct: 74 RGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGF 133
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK 220
D DV+ LV Y DA KVFD++ E++VVSW II +E+ GEA+G F
Sbjct: 134 DWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRG 193
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
+ ++G PD T++ +L AC+ +G+L+ G+W+ + E G+V N + T+L+DMYAKCG+
Sbjct: 194 LLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGS 253
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
+ AR +F M E +V WSA+I G A +G +EAL++F M+ ++ P+ +GV A
Sbjct: 254 MEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSA 313
Query: 341 CNHAGMVEDG 350
C+ G +E G
Sbjct: 314 CSRLGALELG 323
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 165/485 (34%), Positives = 251/485 (51%), Gaps = 9/485 (1%)
Query: 33 SFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S LK C K L Q+HA I SG +++ + L++ ++ + AR +
Sbjct: 126 SVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQM--YANCGQIGVARHVFDGMP 183
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
S+ + WN+++ GY + E V +F + I+ + T VL AC ++ L G
Sbjct: 184 ERSI-VAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGE 242
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
+ + GL + +L+ Y C + A K+FD+M +R VV+W+ +I+ +
Sbjct: 243 LIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQAD 302
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
EA+ F +M+ P+E TM+ VL +C LG GKWVH + ++ L LGT
Sbjct: 303 RCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGT 362
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
LID YAKCG + + +F M NV+TW+A+I GLA +G + ALE FS+M + + P
Sbjct: 363 QLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKP 422
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
N VTF+GVL AC+HA +V+ G F+ M I+P HY M DIL RAG L+EAY F
Sbjct: 423 NDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQF 482
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
I NMPF PN +V R LL++ H + + + LEP S + ++++N YA V
Sbjct: 483 IDNMPFPPNAVVWRTLLASCRAHK---NIEMAEKSLEHITRLEPAHSGDYILLSNTYALV 539
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
G E VR +K +KK+ G S +EL G +H F+S I+ L+ + +
Sbjct: 540 GRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQI 599
Query: 510 KVLNF 514
K L +
Sbjct: 600 KRLGY 604
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/362 (34%), Positives = 191/362 (52%), Gaps = 2/362 (0%)
Query: 35 LKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP 94
L+ C + K L Q+HA + + D I + ++ L + YA SI N+++
Sbjct: 28 LQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIF-NHIDKPES 86
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+N +IRG A+ P A+ +F M + ++ +FT+ VLKAC+ + L EG QV A
Sbjct: 87 SAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHAL 146
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ KSG S+ + N L++ Y +C + A VFD M ERS+V+WN +++ +N E
Sbjct: 147 ILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEV 206
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
V F K+ +L E D+ TM+ VL AC L NL +G+ + ++ +G N L T+LIDM
Sbjct: 207 VKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDM 266
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG V AR LF M++ +V WSAMI G AQ +EAL LF M+ ++ PN VT
Sbjct: 267 YAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTM 326
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ VL +C G E G ++ H +K + D A+ G++ + M
Sbjct: 327 VSVLYSCAMLGAYETG-KWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMS 385
Query: 395 FQ 396
F+
Sbjct: 386 FK 387
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/448 (34%), Positives = 231/448 (51%), Gaps = 34/448 (7%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W+ LI + ++ EA+ F+ M + G+ E L ACA + +N G + +
Sbjct: 207 VTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSL 266
Query: 155 VTKSGLDSDVYTNNNLVRFYGSC------RRKRD-------------------------A 183
K G +S + N L+ Y C R+ D A
Sbjct: 267 SLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNA 326
Query: 184 CKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
+FD M E+ VVSW+ +I+ +N E + F +M+ GF+PDETT++ V+SAC L
Sbjct: 327 KAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARL 386
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
L GKWVH + G +N LGT LIDMY KCG V A +F M E + TW+A+I
Sbjct: 387 AALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALI 446
Query: 304 LGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
LGLA +G E +L++FSNMK ++PN +TF+GVL AC H G+V++G +F+ M H H I
Sbjct: 447 LGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKI 506
Query: 364 KPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNE 423
+P HY M D+L RAG L+EA + MP P+ ALL A H +G
Sbjct: 507 QPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHG---DSEMGRR 563
Query: 424 VRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIH 483
V R+L+EL+P V+++N YA G W+ V +R M + K+ G S +E G IH
Sbjct: 564 VGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIH 623
Query: 484 RFYSGYDSQVELAGIYQILETLNLHMKV 511
F +G + ++ I +L + + +K+
Sbjct: 624 EFLAGDKTHPDMDAIEDMLVEMAMKLKL 651
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 153/382 (40%), Gaps = 80/382 (20%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSV---PIPWNNLIR 102
Q+H + G +D + L+ S N+T A C N+S + WN+++
Sbjct: 99 QVHNHVLKLGFDSDVYVRNTLIN--CFSVCSNMTDA----CRVFNESSVLDSVSWNSILA 152
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
GY EA ++ M R I
Sbjct: 153 GYIEIGNVEEAKHIYHQMPERSI------------------------------------- 175
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
+N+++ +G +ACK+FD+M E+ +V+W+ +I +N EA+ FV M
Sbjct: 176 --IASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMH 233
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
+G DE + LSAC L +++GK +H ++ GT L ALI MY+KCG +
Sbjct: 234 KIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIM 293
Query: 283 CARLLFSR-------------------------------MEEINVWTWSAMILGLAQHGY 311
AR LF M E +V +WS+MI G AQ+
Sbjct: 294 VARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDL 353
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
+E L LF M+ S P+ T + V+ AC +E G ++ H +G+ I
Sbjct: 354 FDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQG-KWVHAYIKRNGLTINVILGT 412
Query: 372 TMADILARAGHLKEAYTFIMNM 393
T+ D+ + G ++ A M
Sbjct: 413 TLIDMYMKCGCVETALEVFYGM 434
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 129/298 (43%), Gaps = 40/298 (13%)
Query: 53 VSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPRE 112
++G + L++F T ++ Y R I N++ ++ WN +IR Y ++ P
Sbjct: 3 LTGFIRETYAASRLIKFSTHFPFIHIDYTRRIF-NFIENTNCFMWNMMIRAYIQTNSPHF 61
Query: 113 AVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVR 172
A ++ M + +TYP +++AC+ E QV +V K G DSDVY N L+
Sbjct: 62 AFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLIN 121
Query: 173 FYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETT 232
+ C DAC+VF++ VSWN I+ GY
Sbjct: 122 CFSVCSNMTDACRVFNESSVLDSVSWNSILA------------GYI-------------- 155
Query: 233 MLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME 292
E+GN+ K ++ Q+ ER + + ++I ++ G V A LF M
Sbjct: 156 ---------EIGNVEEAKHIYHQMPERSIIAS----NSMIVLFGMRGLVVEACKLFDEML 202
Query: 293 EINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
E ++ TWSA+I Q+ EEA+ F M + + V + L AC + +V G
Sbjct: 203 EKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMG 260
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 117/240 (48%), Gaps = 12/240 (5%)
Query: 86 CNYVN------DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFV 135
CN V+ DS+P + W+++I GYA +D E + +F +M+ G KP E T V
Sbjct: 320 CNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSV 379
Query: 136 LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSV 195
+ ACA ++ L +G V A + ++GL +V L+ Y C A +VF M E+ +
Sbjct: 380 ISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGI 439
Query: 196 VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQ 255
+WN +I N + ++ F MK P+E T + VL AC +G + G+
Sbjct: 440 STWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYS 499
Query: 256 LIERGTVL-NCQLGTALIDMYAKCGAVGCARLLFSRMEEI-NVWTWSAMILGLAQHGYAE 313
+I + N + ++D+ + G + A L +RM +V TW A++ +HG +E
Sbjct: 500 MIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSE 559
>gi|125527494|gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group]
Length = 608
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/437 (33%), Positives = 241/437 (55%), Gaps = 5/437 (1%)
Query: 73 SSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
S S ++ AR + V + WN++I YA +EA+ +F M G +P T
Sbjct: 162 SKSGDVVKARRLFDGMVRRT-SASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITI 220
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
+ CA+ L G ++ + + L ++ + L+ Y C+ +A + FD M +
Sbjct: 221 ATMFSICAKTGDLETGKWARSLIAEQDL-QNMIVHTALMEMYVKCQAIDEARREFDRMQQ 279
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
R VV+W+ +I +N E++ F +MK +P+E T++ VLSAC +LG+ LG +
Sbjct: 280 RDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQI 339
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
+ + L LG+ALIDMY KCG VG AR +F+RME V TW++M+ GLA +G+A
Sbjct: 340 GSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNGFA 399
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
++A+ L+ M + PN +TF+ +L AC HAG+V+ G +F EM+ +H + P H
Sbjct: 400 QDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHCAC 459
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELE 432
+ D+L ++G L+EAY FI +M +PN ++ LLSA H A + + +LL LE
Sbjct: 460 IVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAH-ADVE--LAKLAASKLLVLE 516
Query: 433 PRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQ 492
P S V+++N YA+ G+W V +R M++ ++K+ SW+EL G +H+F
Sbjct: 517 PDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWIELDGEVHKFLVQDTYH 576
Query: 493 VELAGIYQILETLNLHM 509
+ A I+ +++ + LH+
Sbjct: 577 PKSAEIFNVVDGMGLHL 593
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 173/427 (40%), Gaps = 84/427 (19%)
Query: 57 QNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW----NNLIRGYAWSDRPRE 112
Q+ A +LK LS + AR + D+VP P LI + +E
Sbjct: 14 QHLAGLLKTRPLHDLLSDASTSRAARHLF-----DAVPRPTPALCGTLISALSRLCSHQE 68
Query: 113 AVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVR 172
+ F + RRG P V+K+CA ++ +G QV + GL D++ LV
Sbjct: 69 LLDAFSSLHRRGSDVPPGCVPLVVKSCAILAASRQGKQVHCHAIVRGLLGDIFVQTALVD 128
Query: 173 FYGSCRRKRDACKVFDDM-------------------------------CERSVVSWNVI 201
FY A KVFD+M R+ SWN +
Sbjct: 129 FYAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSM 188
Query: 202 ITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGT 261
I EA+ F +M G P+ T+ + S C + G+L GKW LI
Sbjct: 189 IACYAHGGEYQEALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWAR-SLIAEQD 247
Query: 262 VLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSN 321
+ N + TAL++MY KC A+ AR F RM++ +V WS MI G AQ+G E+LELF
Sbjct: 248 LQNMIVHTALMEMYVKCQAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFER 307
Query: 322 MKNSSISPNYVTFLGVLCACNHAGMVEDGYR----------------------------- 352
MK +S PN VT +GVL AC G E G +
Sbjct: 308 MKATSCKPNEVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGH 367
Query: 353 ------YFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP---FQPNPIVLR 403
F+ MEH + I +++M LA G ++A T M QPN I
Sbjct: 368 VGRARSVFNRMEH-----KVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFV 422
Query: 404 ALLSASS 410
ALL+A +
Sbjct: 423 ALLTACT 429
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/463 (35%), Positives = 248/463 (53%), Gaps = 9/463 (1%)
Query: 52 QVSGLQNDAQILKELVRFCTLSSS----KNLTYARSILCNYVNDSVPIPWNNLIRGYAWS 107
Q+ GL ++ ++L C+LS KNL AR + + + WN+++ Y+
Sbjct: 275 QIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSAR-VAFYRIEAPDLVSWNSIVNAYSVE 333
Query: 108 DRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTN 167
EA+ +F +M+ G++P T +L AC L G + + + K GLD DV
Sbjct: 334 GLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVC 393
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
N+L+ Y C A VF ++ ++ VV+WN I+T C ++ E + F +
Sbjct: 394 NSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPS 453
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
D ++ VLSA ELG + K VH + G V + L LID YAKCG++ A L
Sbjct: 454 LDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRL 513
Query: 288 FSRM-EEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
F M +V++WS++I+G AQ GYA+EAL+LFS M++ I PN+VTF+GVL AC+ G
Sbjct: 514 FEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVGF 573
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALL 406
V +G Y+ ME +GI P R H + D+LARAG L EA FI MPF+P+ I+ + LL
Sbjct: 574 VNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLL 633
Query: 407 SASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVG 466
+AS +H+ +G +L ++P S V++ N YA G W + + +++ M+ G
Sbjct: 634 AASKMHNDME---MGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSG 690
Query: 467 LKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
+KK G SWV+L G + F S E IY +LE + + M
Sbjct: 691 VKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELIGMEM 733
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 160/349 (45%), Gaps = 19/349 (5%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HA S +D + LV T+ S L +L + D I W ++I G+A
Sbjct: 173 QVHAHALKSERGSDLIVQNALV---TMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFA 229
Query: 106 WSDRPREAVWVFIDMKRRGIK-PTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDV 164
EA+ VF M G P EF + +AC + G Q+ K LD D+
Sbjct: 230 QQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDL 289
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV-CVENLWLGEAVGYFVKMKD 223
Y +L Y + A F + +VSWN I+ VE L L EA+ F +M+D
Sbjct: 290 YVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGL-LSEALVLFSEMRD 348
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G PD T+ +L AC L G+ +H L++ G + + +L+ MYA+C +
Sbjct: 349 SGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSS 408
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A +F +++ +V TW++++ AQH + EE L+LFS + S S + ++ VL A
Sbjct: 409 AMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAE 468
Query: 344 AGMVEDGYRYFHEMEHVH------GIKPMRIHYHTMADILARAGHLKEA 386
G YF ++ VH G+ R+ +T+ D A+ G L +A
Sbjct: 469 LG-------YFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDA 510
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 175/382 (45%), Gaps = 19/382 (4%)
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
P+ W ++I + + R +A+ +F M R G +F ++AC E+ + G QV A
Sbjct: 117 PVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHA 176
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+ KS SD+ N LV Y D +F+ + ++ ++SW II + + E
Sbjct: 177 HALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEME 236
Query: 214 AVGYFVKMKDLG-FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
A+ F KM G P+E AC +G+ G+ +H I+ + +G +L
Sbjct: 237 ALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLS 296
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
DMYA+ + AR+ F R+E ++ +W++++ + G EAL LFS M++S + P+ +
Sbjct: 297 DMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGI 356
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
T G+LCAC + G R H G+ +++ + AR L A
Sbjct: 357 TVRGLLCACVGRDALYHG-RLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHE 415
Query: 393 MPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLEL----EP---RGSQNLVIVANK 445
+ Q + + ++L+A + H+ E +L L EP R S N V+ A+
Sbjct: 416 IKDQ-DVVTWNSILTACAQHNHP-------EEVLKLFSLLNKSEPSLDRISLNNVLSAS- 466
Query: 446 YAEVGMWEKVSNVRRFMKNVGL 467
AE+G +E V V + GL
Sbjct: 467 -AELGYFEMVKQVHAYAFKAGL 487
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 144/299 (48%), Gaps = 32/299 (10%)
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSG-------LDSDVYTNNNLVRFYGSCRRKRDAC 184
Y ++ AC+ + L +G +V ++ S L + N+L+ YG C A
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 185 KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELG 244
+VFD+M R+ VSW +I V+N G+A+G F M G D+ + + ACTELG
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 245 NLSLGKWVHLQLI--ERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
++ G+ VH + ERG+ L Q AL+ MY+K G V +LF R+++ ++ +W ++
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQ--NALVTMYSKNGLVDDGFMLFERIKDKDLISWGSI 224
Query: 303 ILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
I G AQ G+ EAL++F M S PN F AC G E G E +H
Sbjct: 225 IAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYG-------EQIH 277
Query: 362 GIKPMRIHYH---------TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSI 411
G+ I Y +++D+ AR +L A + P+ + ++++A S+
Sbjct: 278 GLS---IKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIE-APDLVSWNSIVNAYSV 332
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 241/445 (54%), Gaps = 17/445 (3%)
Query: 77 NLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGI---KPTE 129
+L YAR + D++P + W+ LI G+ R +A +F M +G+ PT
Sbjct: 288 SLLYARRVF-----DAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS 342
Query: 130 FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD 189
L+ACA + L G Q+ A + KSG+ +D+ N+L+ Y A +FD+
Sbjct: 343 IAS--ALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDE 400
Query: 190 MCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
M + VS++ +++ V+N EA F KM+ EPD TM+ ++ AC+ L L G
Sbjct: 401 MAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHG 460
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
+ H +I RG + ALIDMYAKCG + +R +F+ M ++ +W+ MI G H
Sbjct: 461 RCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIH 520
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIH 369
G +EA LF M N P+ VTF+ +L AC+H+G+V +G +FH M H +G+ P H
Sbjct: 521 GLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEH 580
Query: 370 YHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLL 429
Y M D+L+R G L EAY FI +MP + + V ALL A ++ K D +G +V R +
Sbjct: 581 YICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVY--KNID-LGKKVSRMIQ 637
Query: 430 ELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGY 489
EL P G+ N V+++N Y+ G +++ + VR K G KK G SW+E+ GS+H F G
Sbjct: 638 ELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGD 697
Query: 490 DSQVELAGIYQILETLNLHMKVLNF 514
S + IY+ L+ + + +K L +
Sbjct: 698 QSHPQSPEIYRELDNILVGIKKLGY 722
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 156/343 (45%), Gaps = 27/343 (7%)
Query: 87 NYVNDSVPIP----WNNLIRGYAWSDRPREA--VWVFIDMKRRGIKPTEFTYPFVLKACA 140
+++ D +P P +N+LIR Y+ S A + ++ M R + P +T+PF LKAC+
Sbjct: 77 HHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACS 136
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
++ + G + + +GL +D++ + L+ Y C DA +F M R +V+WN
Sbjct: 137 ALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNA 196
Query: 201 IITVCVENLWLGEAVGYFV--KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
++ + AV + + +M+ P+ +T++ +L + G L+ G VH I
Sbjct: 197 MLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIR 256
Query: 259 RGTVLN----------CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ 308
N LGTAL+DMYAKCG++ AR +F M N TWSA+I G
Sbjct: 257 ACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVL 316
Query: 309 HGYAEEALELFSNMKNSS---ISPNYVTFLGVLCAC-NHAGMVEDGYRYFHEMEHVHGIK 364
+A LF M +SP + CA +H M E H + G+
Sbjct: 317 CSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQ----LHALLAKSGVH 372
Query: 365 PMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLS 407
+++ + A+AG + +A M + + + AL+S
Sbjct: 373 ADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVS 414
>gi|326507322|dbj|BAJ95738.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 593
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 161/492 (32%), Positives = 251/492 (51%), Gaps = 36/492 (7%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY-VNDSVPI--------- 95
Q+H V GL D +L LV F + + ++ A S V D +PI
Sbjct: 91 QVHCHALVRGLLGDVFVLTALVDF--YAKNGDMESAVSAFDEMPVKDPIPINCLITGYSK 148
Query: 96 --------------------PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFV 135
WN++I YA REA+ +F M G +P T V
Sbjct: 149 AGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALALFDRMLSEGARPNAITITSV 208
Query: 136 LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSV 195
CA+ L+ G +V+ + + L +V + L+ Y CR DA + FD M +R V
Sbjct: 209 FSICAKSGDLDTGKRVRDLIGEDDL-QNVIVHTALMEMYVKCRAIDDARREFDRMSQRDV 267
Query: 196 VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQ 255
V+W+ +I +N E++ F +MK P+E T++ V+SAC +LG+ L + +
Sbjct: 268 VAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLGSDELVEQIGNY 327
Query: 256 LIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEA 315
+ L LG+ALIDMY +CG VG AR +FSRME+ V TW++MI GLA +G+AE+A
Sbjct: 328 AENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAEDA 387
Query: 316 LELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMAD 375
+ L+ M + + PN +TF+ +L AC HAG+V+ G +F EM+ H + P H + D
Sbjct: 388 ISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQVEHCACIVD 447
Query: 376 ILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
+L ++G L EAY FI +M +PN ++ LLS+ H A + + R+LL +EP
Sbjct: 448 LLCKSGGLWEAYKFICDMEVEPNAVIWTTLLSSCRAH-ADVE--LAKLASRKLLAMEPDN 504
Query: 436 SQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVEL 495
S V+++N YA+ G+W +R M++ ++K+ SW++L G +H+F
Sbjct: 505 SSIYVLLSNIYADAGLWGDAREIRDLMRSKNVQKLSAYSWIKLDGEVHKFLVQDTYHPRS 564
Query: 496 AGIYQILETLNL 507
A IY ++ L L
Sbjct: 565 AEIYDVIHGLGL 576
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 173/438 (39%), Gaps = 83/438 (18%)
Query: 91 DSVPIPW----NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D+VP P + + + + + + F M R+G P V K+CA +
Sbjct: 28 DAVPRPAPALCSTFLSSLSRASSHHDLLQTFSSMHRKGAYVPSGCVPLVFKSCALTASSC 87
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM---------C------ 191
+G QV + GL DV+ LV FY A FD+M C
Sbjct: 88 QGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSAFDEMPVKDPIPINCLITGYS 147
Query: 192 ----------------ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLV 235
R+ SWN +I EA+ F +M G P+ T+
Sbjct: 148 KAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALALFDRMLSEGARPNAITITS 207
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
V S C + G+L GK V LI + N + TAL++MY KC A+ AR F RM + +
Sbjct: 208 VFSICAKSGDLDTGKRVR-DLIGEDDLQNVIVHTALMEMYVKCRAIDDARREFDRMSQRD 266
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG---MVEDGYR 352
V WS MI G AQ+G E+LELF MK + PN VT +GV+ AC G +VE
Sbjct: 267 VVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLGSDELVEQIGN 326
Query: 353 Y--------------------------------FHEMEHVHGIKPMRIHYHTMADILARA 380
Y F ME G+ I +++M LA
Sbjct: 327 YAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQ-KGV----ITWNSMIRGLAMN 381
Query: 381 GHLKEAYTFIMNMP---FQPNPIVLRALLSASSIHDAKYQDGVG--NEVRRRLLELEPRG 435
G ++A + M QPN I ALL+A + H G+ E++R L + P+
Sbjct: 382 GFAEDAISLYEKMAENGVQPNEITFVALLAACT-HAGLVDQGMAFFEEMKREHL-VSPQV 439
Query: 436 SQNLVIVANKYAEVGMWE 453
IV G+WE
Sbjct: 440 EHCACIVDLLCKSGGLWE 457
>gi|414871822|tpg|DAA50379.1| TPA: hypothetical protein ZEAMMB73_401482 [Zea mays]
Length = 522
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 167/525 (31%), Positives = 247/525 (47%), Gaps = 52/525 (9%)
Query: 5 PVPTTNHIFPPK--PSNCNSDLLSKARQCLSFLKL-CCSKKHLYQIHAQIQVSGLQNDAQ 61
P+PTT+ PP PS+ + + L+ L C S HL Q+HA + SGL D
Sbjct: 8 PLPTTSTTGPPHLLPSSASISAFIASDPALTLLHTRCVSMAHLRQLHAALVKSGLAKDPI 67
Query: 62 ILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVF 117
V FC +++ YA ++ ++ P P WN +IR + RP AV +F
Sbjct: 68 AASRAVAFCA-GPGRDVLYAERLVRHH-----PRPNSFMWNTVIRALSDGARPDAAVALF 121
Query: 118 IDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSC 177
+DM P ++P +L A A + +G + K GL D Y N + Y SC
Sbjct: 122 VDMLSSPTPPDRRSFPSLLAAYARLGRAGDGEALHGMALKLGLAGDAYVRNATIAMYASC 181
Query: 178 RRKRDAC-------------------------------KVFDDMCERSVVSWNVIITVCV 206
R +A VFD M ER+V +W+ +++
Sbjct: 182 GRADEALALFGQCPELDVVACNSVIVALARAGRVDEARSVFDAMPERTVATWSAMVSAYA 241
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
EA+ F M+ G EP+ ++ VL C LG L G WVH + G +N
Sbjct: 242 RAARCSEALALFSAMQADGMEPNANVLVSVLGCCASLGALVQGAWVHEYIDRHGVAMNAL 301
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEE---INVWTWSAMILGLAQHGYAEEALELFSNMK 323
+ TAL+DMY KCG+V AR +F + +W++M+ GLA HG EA+ LFS +K
Sbjct: 302 VVTALVDMYCKCGSVDDARQVFDAARSQGLAKLSSWNSMMQGLAVHGQWREAVALFSELK 361
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+ +SP+ VTF+ VL A H+GM ++ F M HG++P HY + D LARAG L
Sbjct: 362 SYGLSPDNVTFIAVLTAYGHSGMPDEAQAAFASMSSEHGVEPGIEHYGCLVDALARAGRL 421
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIV 442
+EA I MP P+ + ALLS +H DA+ +G R + +PR S V+
Sbjct: 422 REAEDAIRAMPMAPDAAIWGALLSGCRLHGDAE----LGARAAREAVRCDPRDSGAYVLA 477
Query: 443 ANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYS 487
A+ A G + + +R M+ G+ K+ G S +E+ G +H F S
Sbjct: 478 ASVLARGGDPGRGAGIRGRMREAGVGKVPGSSMIEVNGVVHEFVS 522
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/468 (33%), Positives = 249/468 (53%), Gaps = 14/468 (2%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H I +GL+ D+ I L+ N+ A I ++ V I W +I G
Sbjct: 269 VHGHILRAGLEQDSHIETSLIGMYL--KCGNVNSAFRIFEGMMHKDV-ISWTAMISGLVQ 325
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+D AV VF M + + P+ T VL ACAE+ G V + + + D+ +
Sbjct: 326 NDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPS 385
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
N+LV Y C +C VFD M R +VSWN I++ +N L +A+ F +M+
Sbjct: 386 QNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQ 445
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL-GTALIDMYAKCGAVGCAR 285
PD T++ +L AC +G L GKW+H + + + C L TAL+DMY+KCG +G A+
Sbjct: 446 RPDSITVVSLLQACASIGALHQGKWIH-NFVTKSCLGPCILIDTALVDMYSKCGDLGSAQ 504
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
F RM + ++ +WS++I G HG E AL ++S+ ++ I PN+V +L +L AC+H G
Sbjct: 505 KCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNG 564
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+V+ G +FH M GI+P H + D+L+RAG ++EAY+F M +P+ VL L
Sbjct: 565 LVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGIL 624
Query: 406 LSASSIHDAKYQDG---VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFM 462
L DA G +G+ V R ++ L+P + N V +A+ YA + W+ V V M
Sbjct: 625 L------DACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYASMKRWDGVGEVWTQM 678
Query: 463 KNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
K++ LKK+ G S++EL G+I F++ + S + I +L+ L M+
Sbjct: 679 KSLHLKKLPGWSFIELHGTITTFFTDHSSHPQFEEIMLVLKILGSEMR 726
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 167/343 (48%), Gaps = 8/343 (2%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I WN+L+ GYA RE + + I MK GI+P + T+ ++ A A S L G V +
Sbjct: 213 ISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGH 272
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ ++GL+ D + +L+ Y C A ++F+ M + V+SW +I+ V+N A
Sbjct: 273 ILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMA 332
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
V F +M P T+ VL+AC ELG+ LG VH ++ + L+ +L+ M
Sbjct: 333 VTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTM 392
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG + + +F RM ++ +W+A++ G AQ+G+ +AL LF+ M+ + P+ +T
Sbjct: 393 YAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITV 452
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ +L AC G + G ++ H + P + + D+ ++ G L A MP
Sbjct: 453 VSLLQACASIGALHQG-KWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMP 511
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
Q L+S SSI G G R + G Q
Sbjct: 512 QQD-------LVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQ 547
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 181/393 (46%), Gaps = 36/393 (9%)
Query: 1 MVRFPVPTTNHIFPPKPSNCNS-DLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQND 59
M+ P H FP C S DL S LSF H ++ V G +D
Sbjct: 39 MLSTDTPPDAHTFPSLVKACTSLDLFSHG---LSF-------------HQRVIVDGYSSD 82
Query: 60 AQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFID 119
+ I L+ F S + AR + + ++D +PW +I Y + A ++
Sbjct: 83 SYIATSLINF--YSKFGHNQSARKVF-DTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNI 139
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M+R+GI+P+ T +L E+ L + A V + G SDV N+++ Y C R
Sbjct: 140 MRRQGIQPSSVTMLGLLSGVLELVHLQ---CLHACVIQYGFGSDVALANSMLNVYCKCGR 196
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
DA +F+ M R V+SWN +++ + + E + ++MK G EPD+ T ++SA
Sbjct: 197 VEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSA 256
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
L +GK VH ++ G + + T+LI MY KCG V A +F M +V +W
Sbjct: 257 AAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISW 316
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+AMI GL Q+ A+ A+ +F M S + P+ T VL AC G G
Sbjct: 317 TAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLG-------TS 369
Query: 360 VHG-IKPMRIHY-----HTMADILARAGHLKEA 386
VHG I RI +++ + A+ GHL+++
Sbjct: 370 VHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQS 402
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 129/318 (40%), Gaps = 49/318 (15%)
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
S+N II + + + M PD T ++ ACT L S G H ++
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
I G + + T+LI+ Y+K G AR +F M++ NV W+ MI + G + A
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134
Query: 317 ELFSNMKNSSISPNYVTFLGVLCA--------CNHA------------------------ 344
+++ M+ I P+ VT LG+L C HA
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKC 194
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP---FQPNPIV 401
G VED F M+ I ++++ A+ G+++E ++ M +P+
Sbjct: 195 GRVEDAQALFELMDARDVIS-----WNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQT 249
Query: 402 LRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRR- 460
+L+SA+++ + + GVG V +L ++ + + +GM+ K NV
Sbjct: 250 FGSLVSAAAM---QSKLGVGKMVHGHILRAGLEQDSHI-----ETSLIGMYLKCGNVNSA 301
Query: 461 FMKNVGLKKMKGMSWVEL 478
F G+ +SW +
Sbjct: 302 FRIFEGMMHKDVISWTAM 319
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 154/461 (33%), Positives = 229/461 (49%), Gaps = 38/461 (8%)
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
++ + WN +I GY S EA +F M + I P EFT+ +L ACA G
Sbjct: 256 IDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHG 315
Query: 149 MQVQANVTKSGLD----SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
V + D + + NN LV Y + A K+FD M + VVSWN I++
Sbjct: 316 KSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSG 375
Query: 205 -----CVENL--------------WLGEAVGY------------FVKMKDLGFEPDETTM 233
C++N W+ GY F +M+ +P + T
Sbjct: 376 YIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTY 435
Query: 234 LVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEE 293
++AC ELG L GK +H L++ G + G AL+ MYA+CGAV ARL+F M
Sbjct: 436 AGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPN 495
Query: 294 INVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRY 353
++ +W+AMI L QHG+ EALELF M I P+ ++FL +L ACNHAG+V+DG++Y
Sbjct: 496 VDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQY 555
Query: 354 FHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHD 413
F ME GI P HY + D+L RAG + EA I MPF+P P + A+LS I+
Sbjct: 556 FESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRING 615
Query: 414 AKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGM 473
+G +L ++ P ++++N Y+ G W + VR+ M++ G+KK G
Sbjct: 616 DME---LGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGC 672
Query: 474 SWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
SW+E+G +H F G + +Y+ LE + M+ L +
Sbjct: 673 SWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKMRKLGY 713
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 160/405 (39%), Gaps = 89/405 (21%)
Query: 91 DSVPIP------WNNLIRGYAWSDRPREAVWVFIDM--KRRGIKPTEFTYPFVLKACAEI 142
DSVP+ N +I +A + AV VF + ++P ++++ +L A ++
Sbjct: 113 DSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQM 172
Query: 143 SGL--NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRK---RDACKVFDDMCERSVVS 197
L + Q+ V K G + + +N L+ Y C RDA KV D+M E+ ++
Sbjct: 173 HDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELT 232
Query: 198 -------------------------------WNVIITVCVENLWLGEAVGYFVKMKDLGF 226
WN +I+ V++ EA F +M
Sbjct: 233 WTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRI 292
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLI--ERGTVLNCQL--GTALIDMYAKCGAVG 282
PDE T +LSAC G GK VH Q I + V L AL+ +Y+K G +
Sbjct: 293 PPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIA 352
Query: 283 CARLLFSRM--EEINVW-----------------------------TWSAMILGLAQHGY 311
A +F M +++ W +W M+ G G
Sbjct: 353 VATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGL 412
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH----GIKPMR 367
AE+AL+LF+ M++ + P T+ G + AC G ++ G + H H G +
Sbjct: 413 AEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQL-----HAHLVQCGFEASN 467
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
+ + + AR G +K+A + MP + + A++SA H
Sbjct: 468 SAGNALLTMYARCGAVKDARLVFLVMP-NVDSVSWNAMISALGQH 511
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 94/244 (38%), Gaps = 51/244 (20%)
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDDM--CERSVVSWNVIITVCVENLWLGEAVGYF 218
D +LV Y R RD+ FD + R V N +I+ AV F
Sbjct: 86 DPGPVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVF 145
Query: 219 VKM--KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL----IERGTVLNCQLGTALI 272
+ D PD+ + +LSA ++ +L++ L + G VL+ + ALI
Sbjct: 146 RSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLS--VSNALI 203
Query: 273 DMYAKCGAVGC---ARLLFSRMEEIN--VWT----------------------------- 298
+Y KC A G AR + M E + WT
Sbjct: 204 ALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVV 263
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
W+AMI G Q G EA ELF M + I P+ TF +L AC +AG +F +
Sbjct: 264 WNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAG-------FFLHGK 316
Query: 359 HVHG 362
VHG
Sbjct: 317 SVHG 320
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 182/549 (33%), Positives = 272/549 (49%), Gaps = 72/549 (13%)
Query: 32 LSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
L L+ C K L + IH + D+ +L +L R S + AR +
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRL--YLSCNQVVLARRLFDEI 69
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKAC--------- 139
N SV I WN +IR YAW+ A+ ++ M G++P ++TYPFVLKAC
Sbjct: 70 PNPSV-ILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 140 ------AEISGLNE---------------GMQVQANVTKSGLD-SDVYTNNNLV---RFY 174
A++ GL G+ V+A S + DV N ++ Y
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188
Query: 175 GSCR---------RKRDAC--------------------KVFDDMCERSVVSWNVIITVC 205
G C ++ C K+FD M R+ VSW+ +I
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGY 248
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
V + + EA+ F M+ G +PD TTML VL AC+ L L G H LI RG +
Sbjct: 249 VASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDT 308
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
+ ALIDMY+KCG + AR +F+RM+ ++ +W+AMI+G HG EAL LF ++
Sbjct: 309 LICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLAL 368
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
+ P+ +TF+ +L +C+H+G+V +G +F M I P H M DIL RAG + E
Sbjct: 369 GLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDE 428
Query: 386 AYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANK 445
A+ FI NMPF+P+ + ALLSA IH +G EV +++ L P + N V+++N
Sbjct: 429 AHHFIRNMPFEPDVRIWSALLSACRIHK---NIELGEEVSKKIQSLGPESTGNFVLLSNI 485
Query: 446 YAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
Y+ G W+ +++R K+ GLKK+ G SW+E+ G +H F G S ++L+ I + LE L
Sbjct: 486 YSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEEL 545
Query: 506 NLHMKVLNF 514
+ MK L +
Sbjct: 546 LVEMKRLGY 554
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 107/211 (50%)
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
Y +L+AC + L E ++ + K+ ++D + L R Y SC + A ++FD++
Sbjct: 11 YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIP 70
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
SV+ WN II N A+ + M LG P++ T VL AC+ L + G
Sbjct: 71 NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+H G + + TAL+D YAKCG + A+ LFS M +V W+AMI G + +G
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACN 342
++A++L M+ I PN T +GVL C
Sbjct: 191 CDDAVQLIMQMQEEGICPNSSTIVGVLPTCQ 221
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 241/445 (54%), Gaps = 17/445 (3%)
Query: 77 NLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGI---KPTE 129
+L YAR + D++P + W+ LI G+ R +A +F M +G+ PT
Sbjct: 173 SLLYARRVF-----DAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS 227
Query: 130 FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD 189
L+ACA + L G Q+ A + KSG+ +D+ N+L+ Y A +FD+
Sbjct: 228 IAS--ALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDE 285
Query: 190 MCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
M + VS++ +++ V+N EA F KM+ EPD TM+ ++ AC+ L L G
Sbjct: 286 MAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHG 345
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
+ H +I RG + ALIDMYAKCG + +R +F+ M ++ +W+ MI G H
Sbjct: 346 RCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIH 405
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIH 369
G +EA LF M N P+ VTF+ +L AC+H+G+V +G +FH M H +G+ P H
Sbjct: 406 GLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEH 465
Query: 370 YHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLL 429
Y M D+L+R G L EAY FI +MP + + V ALL A ++ K D +G +V R +
Sbjct: 466 YICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVY--KNID-LGKKVSRMIQ 522
Query: 430 ELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGY 489
EL P G+ N V+++N Y+ G +++ + VR K G KK G SW+E+ GS+H F G
Sbjct: 523 ELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGD 582
Query: 490 DSQVELAGIYQILETLNLHMKVLNF 514
S + IY+ L+ + + +K L +
Sbjct: 583 QSHPQSPEIYRELDNILVGIKKLGY 607
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 136/304 (44%), Gaps = 21/304 (6%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M R + P +T+PF LKAC+ ++ + G + + +GL +D++ + L+ Y C
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV--KMKDLGFEPDETTMLVVL 237
DA +F M R +V+WN ++ + AV + + +M+ P+ +T++ +L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 238 SACTELGNLSLGKWVHLQLIERGTVLN----------CQLGTALIDMYAKCGAVGCARLL 287
+ G L+ G VH I N LGTAL+DMYAKCG++ AR +
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS---ISPNYVTFLGVLCAC-NH 343
F M N TWSA+I G +A LF M +SP + CA +H
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
M E H + G+ +++ + A+AG + +A M + + +
Sbjct: 241 LRMGEQ----LHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYS 295
Query: 404 ALLS 407
AL+S
Sbjct: 296 ALVS 299
>gi|225450551|ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 500
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 160/479 (33%), Positives = 256/479 (53%), Gaps = 36/479 (7%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
++HA + SGL L++L+ T SSS +L +AR +L + ++ +N + R YA
Sbjct: 6 RLHAHLITSGLHQQENHLRKLITLYTSSSSSSLHHAR-LLFDAIHHPSTYLYNTMFRVYA 64
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
S P A+ + M R G P +T+PF+LKAC+ ++ L +G ++ K GL V+
Sbjct: 65 ASPTPLHALLLHRHMLRHGPPPDTYTFPFLLKACSALAHLPKGQELHCQALKFGLGGHVF 124
Query: 166 TNNNLVRFYGS------CRRKRD--------------AC-----------KVFDDMCERS 194
N+L+ YGS RR D AC KVFD+M ERS
Sbjct: 125 VENSLIHLYGSNSGMDSARRVFDGMGYRDIASWTTLLACYANSCSVKAARKVFDEMPERS 184
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHL 254
V+S++ +I V EA+ F ++ + EP ++ ++ VL AC LG L +G+WV+
Sbjct: 185 VISYSAMIAAYVRGNRFREALDLFRELFSVKIEPSDSCVMSVLCACANLGALDVGRWVYS 244
Query: 255 QLIE-RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
+ + +G ++ ++ TALIDM+ KCG++ A L+F +E +V W+AM+ GLA HG E
Sbjct: 245 YVCQSKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGLAMHGLGE 304
Query: 314 EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
+ +E F M +S + PN VTF+ +L C+H+G+V +G YF ME G++P H+ +
Sbjct: 305 QLIEAFEKMVDSGVKPNGVTFVALLSGCSHSGLVNEGLYYFDRMESDFGVEPTVEHFGCV 364
Query: 374 ADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP 433
D+L RAG + +A I MPF+PN + +LL+A ++ +G + L++ EP
Sbjct: 365 VDLLGRAGLIDQAMQLISEMPFEPNAAIWGSLLNACRVYK---NVEIGELAAQWLIKDEP 421
Query: 434 RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQ 492
+ + + Y E G W++V V+ MK VG +K G S +E+GG + F G S
Sbjct: 422 WNGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIEVGGICYEFVVGDKSH 480
>gi|356547111|ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Glycine max]
Length = 521
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 157/460 (34%), Positives = 240/460 (52%), Gaps = 39/460 (8%)
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI---SGLN 146
ND + + W I Y S +A F+ M+ I+P T+ +L ACA S ++
Sbjct: 53 NDPI-VSWTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYPSRSSIS 111
Query: 147 EGMQVQANVTKSGLD-SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
G + A+V K GLD +DV L+ Y C R A FD M R++VSWN +I
Sbjct: 112 FGTAIHAHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGY 171
Query: 206 VENLWLGEA------------------VGYFVK-------------MKDLGFEPDETTML 234
+ N +A +G FVK M+ G PD T++
Sbjct: 172 MRNGKFEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTVI 231
Query: 235 VVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI 294
V++AC LG L LG WVH ++ + N ++ +LIDMY++CG + AR +F RM +
Sbjct: 232 AVIAACANLGTLGLGLWVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQR 291
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYF 354
+ +W+++I+G A +G A+EAL F++M+ P+ V++ G L AC+HAG++ +G R F
Sbjct: 292 TLVSWNSIIVGFAVNGLADEALSYFNSMQEEGFKPDGVSYTGALMACSHAGLIGEGLRIF 351
Query: 355 HEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDA 414
M+ V I P HY + D+ +RAG L+EA + NMP +PN ++L +LL+A
Sbjct: 352 EHMKRVRRILPRIEHYGCLVDLYSRAGRLEEALNVLKNMPMKPNEVILGSLLAACRTQG- 410
Query: 415 KYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMS 474
G+ V L+EL+ G N V+++N YA VG W+ + VRR MK G++K G S
Sbjct: 411 --NIGLAENVMNYLIELDSGGDSNYVLLSNIYAAVGKWDGANKVRRRMKERGIQKKPGFS 468
Query: 475 WVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+E+ SIH+F SG S E IY LE L+ +++ +
Sbjct: 469 SIEIDSSIHKFVSGDKSHEEKDHIYAALEFLSFELQLCGY 508
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 178/507 (35%), Positives = 263/507 (51%), Gaps = 35/507 (6%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSS-SKNLTYARSILCNYVN 90
+S L C S L QIHAQ+ + L N + L+ FC+LS S L YA S+ +
Sbjct: 10 VSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQH 69
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKR--RGIKPTEFTYPFVLKACAEISGLNEG 148
+ I + LI+G++ + P E++ ++ M EF+ P VLKAC ++ +EG
Sbjct: 70 PNSFI-FFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDEG 128
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE- 207
QV V K+ L D + N++VR Y A +VFD M R VVSWN +I ++
Sbjct: 129 RQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKA 188
Query: 208 -NLWLGEAV-----------------GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
+ L + GY +M LG PD ++ VLSA +LG + G
Sbjct: 189 GEIELASELFDEMPERDLVSCNAMIDGYGKEMLSLGLRPDGPAIVSVLSAIADLGFVEEG 248
Query: 250 KWVHLQLIERGTVLNCQ-LGTALIDMYAKCGAVGCARLLFSRM-EEINVWTWSAMILGLA 307
KW+H + L+ +G+ALIDMY+KCG + A +F + N+ W++MI GLA
Sbjct: 249 KWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLA 308
Query: 308 QHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
HG A EAL++F M+ I PN +TFLG+L C+H G+VE+G YF M + I P
Sbjct: 309 IHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRI 368
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRR 427
HY M D+ RAG L++A I NMPF+ + + +A+LSAS H +G R
Sbjct: 369 QHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHG---HIEIGKSAALR 425
Query: 428 LLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFY- 486
+EL P S + V+++N YA+ G W+ V+ +R M+ G+KK+ G S + + G +H F
Sbjct: 426 AIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVNGKVHEFLL 485
Query: 487 -----SGYDSQVELAGIYQILETLNLH 508
S Y QV LA I +++ L L
Sbjct: 486 GKELDSSYSGQV-LAKIAEVVSRLKLQ 511
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 241/445 (54%), Gaps = 17/445 (3%)
Query: 77 NLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGI---KPTE 129
+L YAR + D++P + W+ LI G+ R +A +F M +G+ PT
Sbjct: 173 SLLYARRVF-----DAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS 227
Query: 130 FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD 189
L+ACA + L G Q+ A + KSG+ +D+ N+L+ Y A +FD+
Sbjct: 228 IAS--ALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDE 285
Query: 190 MCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
M + VS++ +++ V+N EA F KM+ EPD TM+ ++ AC+ L L G
Sbjct: 286 MAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHG 345
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
+ H +I RG + ALIDMYAKCG + +R +F+ M ++ +W+ MI G H
Sbjct: 346 RCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIH 405
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIH 369
G +EA LF M N P+ VTF+ +L AC+H+G+V +G +FH M H +G+ P H
Sbjct: 406 GLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEH 465
Query: 370 YHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLL 429
Y M D+L+R G L EAY FI +MP + + V ALL A ++ K D +G +V R +
Sbjct: 466 YICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVY--KNID-LGKKVSRMIQ 522
Query: 430 ELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGY 489
EL P G+ N V+++N Y+ G +++ + VR K G KK G SW+E+ GS+H F G
Sbjct: 523 ELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGD 582
Query: 490 DSQVELAGIYQILETLNLHMKVLNF 514
S + IY+ L+ + + +K L +
Sbjct: 583 QSHPQSPEIYRELDNILVGIKKLGY 607
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 136/305 (44%), Gaps = 21/305 (6%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M R + P +T+PF LKAC+ ++ + G + + +GL +D++ + L+ Y C
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV--KMKDLGFEPDETTMLVVL 237
DA +F M R +V+WN ++ + AV + + +M+ P+ +T++ +L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 238 SACTELGNLSLGKWVHLQLIERGTVLN----------CQLGTALIDMYAKCGAVGCARLL 287
+ G L+ G VH I N LGTAL+DMYAKCG++ AR +
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS---ISPNYVTFLGVLCAC-NH 343
F M N TWSA+I G +A LF M +SP + CA +H
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
M E H + G+ +++ + A+AG + +A M + + +
Sbjct: 241 LRMGEQ----LHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYS 295
Query: 404 ALLSA 408
AL+S
Sbjct: 296 ALVSG 300
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 171/503 (33%), Positives = 247/503 (49%), Gaps = 44/503 (8%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIH I S D + L+ F S + AR + +V + WN LI Y
Sbjct: 177 QIHGLISKSKYSLDVFMGSGLIDF--YSKCGLVGCARRVFDGMEEKNV-VSWNCLITCYE 233
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG-LDSDV 164
+ EA+ F M G KP E T V+ ACA ++ EG+Q+ A V KS +D+
Sbjct: 234 QNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDL 293
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDMC-------------------------------ER 193
N LV Y C R +A VFD M ++
Sbjct: 294 ILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQK 353
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
+VSWN +I +N EA+G F +K P T +L+A L +L LG+ H
Sbjct: 354 DIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAH 413
Query: 254 LQLIERGTVLNCQ------LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA 307
+++ G +G +LIDMY KCG+V +F M E + +W+ MI+G A
Sbjct: 414 SHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYA 473
Query: 308 QHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
Q+GY EALELF M S P++VT +G LCAC+HAG+VE+G RYF M HG+ P++
Sbjct: 474 QNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVK 533
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRR 427
HY M D+L RAG L+EA I +MP QP+ +V +LLSA +H +G V +
Sbjct: 534 DHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVH---RNITLGKYVAEK 590
Query: 428 LLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYS 487
+ E++P S V++AN Y+E+G W +VR+ M+ G+ K G SW+++ ++H F
Sbjct: 591 IFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCSWIDIQSNVHVFMV 650
Query: 488 GYDSQVELAGIYQILETLNLHMK 510
+ IY IL+ L HM+
Sbjct: 651 KDKRHPQKKEIYSILKLLTKHMR 673
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 166/340 (48%), Gaps = 49/340 (14%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN++I G+A DR EA+ F+ M R ++++ L AC+ + L G Q+ ++
Sbjct: 124 WNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLIS 183
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
KS DV+ + L+ FY C A +VFD M E++VVSWN +IT +N EA+
Sbjct: 184 KSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALE 243
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN-CQLGTALIDMY 275
F +M +LGF+PDE T+ V+SAC L G +H ++++ N LG AL+DMY
Sbjct: 244 AFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMY 303
Query: 276 AKCGAVGCARLLFSRM-------------------------------EEINVWTWSAMIL 304
AKCG V AR +F RM ++ ++ +W+A+I
Sbjct: 304 AKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIA 363
Query: 305 GLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC-----------NHAGMVEDGYRY 353
G Q+G EEAL LF +K S+ P + TF +L A H+ +V+ G+R+
Sbjct: 364 GYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRF 423
Query: 354 FHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
G +P +++ D+ + G ++E NM
Sbjct: 424 ------QSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENM 457
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 135/295 (45%), Gaps = 33/295 (11%)
Query: 133 PF--VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
PF +L C ++ + V + ++ +V+ N L+ YG C A KVFD M
Sbjct: 26 PFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRM 85
Query: 191 CERSVVSWNVIITVCV------ENLWL-------------------------GEAVGYFV 219
ER+V S+N II+ + E+ WL EA+ +FV
Sbjct: 86 SERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFV 145
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+M F ++ + LSAC+ L +L LG +H + + L+ +G+ LID Y+KCG
Sbjct: 146 RMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCG 205
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
VGCAR +F MEE NV +W+ +I Q+G A EALE F M P+ VT V+
Sbjct: 206 LVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVS 265
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
AC ++G + + + I + + D+ A+ G + EA MP
Sbjct: 266 ACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMP 320
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 60/148 (40%), Gaps = 31/148 (20%)
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
F D + +L C +L + + VH +LI+ + LID+Y KCG + AR
Sbjct: 20 FFTDSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYAR 79
Query: 286 LLFSRMEEINVW-------------------------------TWSAMILGLAQHGYAEE 314
+F RM E NV+ +W++MI G AQH EE
Sbjct: 80 KVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEE 139
Query: 315 ALELFSNMKNSSISPNYVTFLGVLCACN 342
AL+ F M N +F L AC+
Sbjct: 140 ALDWFVRMHRDDFVLNDYSFGSGLSACS 167
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 170/519 (32%), Positives = 256/519 (49%), Gaps = 47/519 (9%)
Query: 32 LSFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILCN 87
+S L C + + L +IH+ I GL+ D + L+ +C +S + AR I
Sbjct: 262 VSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQE---AREIFDR 318
Query: 88 YVNDSVPIPWNNLIRGYAWS-----DRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI 142
V I W+ +I GYA S + E + M+R G+ P + T+ +L+AC
Sbjct: 319 MSKRDV-ISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAH 377
Query: 143 SGLNEGMQVQANVTKSGLDSD----------------VY---------TNNNLV------ 171
L +G Q+ A ++K G + D +Y N N+V
Sbjct: 378 GALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFL 437
Query: 172 RFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDET 231
Y C A KVF +M R+VVSWN++I +N + + MK GF+PD
Sbjct: 438 SMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRV 497
Query: 232 TMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM 291
T++ +L AC L L GK VH + ++ G + + T+LI MY+KCG V AR +F +M
Sbjct: 498 TVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKM 557
Query: 292 EEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGY 351
+ W+AM+ G QHG EA++LF M +SPN +T V+ AC+ AG+V++G
Sbjct: 558 SNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGR 617
Query: 352 RYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSI 411
F M+ + P + HY M D+L RAG L+EA FI +MP +P+ V ALL A
Sbjct: 618 EIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKS 677
Query: 412 HDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMK 471
H+ + +LELEP + + ++N YA+ G W+ + VRR M + GLKK +
Sbjct: 678 HN---NVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDR 734
Query: 472 GMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
G S +E+ G IH F + + E+ I+ LETL MK
Sbjct: 735 GESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMK 773
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 183/378 (48%), Gaps = 14/378 (3%)
Query: 39 CSKKHLYQ----IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP 94
C+K ++ +H Q+ G++ D + L+ F S +++ A + V
Sbjct: 66 CAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINF--YSKFEDVASAEQVFRRMTLRDV- 122
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W+++I YA ++ P +A F M I+P T+ +LKAC S L +G ++
Sbjct: 123 VTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTI 182
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V G+++DV L+ Y C AC+VF M ER+VVSW II ++ L EA
Sbjct: 183 VKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEA 242
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ +M G P+ T + +L++C L+ G+ +H + ERG + + ALI M
Sbjct: 243 FELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITM 302
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA-----EEALELFSNMKNSSISP 329
Y KC +V AR +F RM + +V +WSAMI G AQ GY +E +L M+ + P
Sbjct: 303 YCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFP 362
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
N VTF+ +L AC G +E G + E+ V G + R + ++ A+ G + EA
Sbjct: 363 NKVTFMSILRACTAHGALEQGRQIHAELSKV-GFELDRSLQTAIFNMYAKCGSIYEAEQV 421
Query: 390 IMNMPFQPNPIVLRALLS 407
M N + + LS
Sbjct: 422 FSKMA-NKNVVAWTSFLS 438
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 126/244 (51%)
Query: 109 RPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNN 168
R REA+ + +K+RG+ TY V++ CA+ +G V + + G++ D+Y N
Sbjct: 36 RLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGN 95
Query: 169 NLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEP 228
+L+ FY A +VF M R VV+W+ +I N +A F +M D EP
Sbjct: 96 SLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEP 155
Query: 229 DETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLF 288
+ T L +L AC L G+ +H + G + + TALI MY+KCG + A +F
Sbjct: 156 NRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVF 215
Query: 289 SRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVE 348
+M E NV +W+A+I AQH EA EL+ M + ISPN VTF+ +L +CN +
Sbjct: 216 HKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALN 275
Query: 349 DGYR 352
G R
Sbjct: 276 RGRR 279
>gi|242079801|ref|XP_002444669.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
gi|241941019|gb|EES14164.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
Length = 581
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 241/464 (51%), Gaps = 17/464 (3%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP------IPWNN 99
Q+H+ GL +D +L L+ SS AR +L DS P + WN
Sbjct: 114 QLHSLSVKLGLVSDTFVLNSLINM--YSSCSYPATARQVL-----DSAPQGACDTVSWNT 166
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
+I GY P +A+ F M + + + T L A A+ + G + V +G
Sbjct: 167 IISGYLRGGMPNKALQAFGQMVKEQVTLDDVTLLNALVASAKAGKVKVGRLCHSLVVVNG 226
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
+ Y ++L+ Y C DA KVF M ER+VV W +I+ + EAV F
Sbjct: 227 AGINCYMGSSLISMYAKCGLVEDARKVFHGMHERNVVCWTSMISGYTQLGKFKEAVNLFR 286
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
M+ G + D+ T+ V+S+C ++G L LG++VH G + +LIDMY+KCG
Sbjct: 287 DMQITGMKVDDGTIATVVSSCAQMGALDLGRYVHAYCDVHGLGKELSVKNSLIDMYSKCG 346
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS-ISPNYVTFLGVL 338
+ A +F + + +V++W+AMI+G +G EAL+LF+ M+ + PN VTFLGVL
Sbjct: 347 DINKAHEIFCGLTKRDVFSWTAMIMGFTVNGLCSEALDLFAQMEGEGKVMPNEVTFLGVL 406
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
+C+H G+VE G+ YF M V+ + P HY M D+L RA L EA FI NMP P+
Sbjct: 407 TSCSHGGLVEQGFHYFQRMSMVYKLAPRIEHYGCMVDLLGRAKLLTEAEQFIKNMPIAPD 466
Query: 399 PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
+V R+LL A A + G+ V R+LELEP+ V+++N YA W V+ +
Sbjct: 467 VVVWRSLLFACR---ACGEVGLAEFVAERILELEPKKCAGHVLLSNVYATTSRWVDVNEL 523
Query: 459 RRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQIL 502
R M N + K G S++E+ G +H F++G +S +E IY IL
Sbjct: 524 RTSMDNSRMSKQPGCSFIEVDGCVHEFFAGDESHLETEAIYNIL 567
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 133/260 (51%), Gaps = 3/260 (1%)
Query: 130 FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD 189
++ A + + ++ G Q+ + K GL SD + N+L+ Y SC A +V D
Sbjct: 94 YSLNIAFSATSRLPSVSVGAQLHSLSVKLGLVSDTFVLNSLINMYSSCSYPATARQVLDS 153
Query: 190 MCERS--VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLS 247
+ + VSWN II+ + +A+ F +M D+ T+L L A + G +
Sbjct: 154 APQGACDTVSWNTIISGYLRGGMPNKALQAFGQMVKEQVTLDDVTLLNALVASAKAGKVK 213
Query: 248 LGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA 307
+G+ H ++ G +NC +G++LI MYAKCG V AR +F M E NV W++MI G
Sbjct: 214 VGRLCHSLVVVNGAGINCYMGSSLISMYAKCGLVEDARKVFHGMHERNVVCWTSMISGYT 273
Query: 308 QHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
Q G +EA+ LF +M+ + + + T V+ +C G ++ G RY H VHG+
Sbjct: 274 QLGKFKEAVNLFRDMQITGMKVDDGTIATVVSSCAQMGALDLG-RYVHAYCDVHGLGKEL 332
Query: 368 IHYHTMADILARAGHLKEAY 387
+++ D+ ++ G + +A+
Sbjct: 333 SVKNSLIDMYSKCGDINKAH 352
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 78/167 (46%), Gaps = 3/167 (1%)
Query: 229 DETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLF 288
D ++ + SA + L ++S+G +H ++ G V + + +LI+MY+ C AR +
Sbjct: 92 DNYSLNIAFSATSRLPSVSVGAQLHSLSVKLGLVSDTFVLNSLINMYSSCSYPATARQVL 151
Query: 289 SRMEE--INVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
+ + +W+ +I G + G +AL+ F M ++ + VT L L A AG
Sbjct: 152 DSAPQGACDTVSWNTIISGYLRGGMPNKALQAFGQMVKEQVTLDDVTLLNALVASAKAGK 211
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
V+ G R H + V+G ++ + A+ G +++A M
Sbjct: 212 VKVG-RLCHSLVVVNGAGINCYMGSSLISMYAKCGLVEDARKVFHGM 257
>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
Length = 766
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 160/469 (34%), Positives = 251/469 (53%), Gaps = 21/469 (4%)
Query: 52 QVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPI----------PWNNLI 101
Q+ G+ Q+ + C+LS YAR CN ++ + + WN+LI
Sbjct: 272 QIHGVSVKYQLDRNSYAGCSLSD----MYAR---CNELDSARKVFYRIESPDLVSWNSLI 324
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
++ EA+ +F +M+ G++P T +L AC L++G + + + K GL
Sbjct: 325 NAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLG 384
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
DV +N+L+ Y C A VF + +R VV+WN I+T CV++ L + F +
Sbjct: 385 GDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQHLEDVFKLFSLL 444
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
D ++ VLSA ELG + K VH + G V + L LID YAKCG++
Sbjct: 445 HRSMPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSL 504
Query: 282 GCARLLFSRMEE-INVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
A LF M +V++WS++I+G AQ GYA+EAL+LF+ M+N + PN+VTF+GVL A
Sbjct: 505 DDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLTA 564
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPI 400
C+ G+V++G Y+ M+ +GI P R H + D+LARAG L EA F+ MPF+P+ I
Sbjct: 565 CSRVGLVDEGCYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQMPFEPDII 624
Query: 401 VLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRR 460
+ + LL+AS H+ +G +L ++P S V++ N YA G W + + +++
Sbjct: 625 MWKTLLAASRTHN---DVDMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEFARLKK 681
Query: 461 FMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
M++ G++K G SW++L G + F S E IY +LE + L M
Sbjct: 682 DMRSSGVQKSPGKSWIKLKGELKVFIVEDRSHPESDEIYTMLEVIGLEM 730
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 180/387 (46%), Gaps = 22/387 (5%)
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
D P+ W +I +A + R +A+ +F M R G P +F + AC+E+ L G Q
Sbjct: 110 DRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQ 169
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
V A K SD+ N LV Y D +F+ + ++ ++SW II +
Sbjct: 170 VHAQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGR 229
Query: 211 LGEAVGYFVKMKDLGF-EPDETTMLVVLSACTELGN-LSLGKWVHLQLIERGTVLNCQLG 268
+A+ F +M G P+E V AC+ + N L G+ +H ++ N G
Sbjct: 230 EMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAG 289
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
+L DMYA+C + AR +F R+E ++ +W+++I + G EA+ LFS M++S +
Sbjct: 290 CSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLR 349
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH------GIKPMRIHYHTMADILARAGH 382
P+ +T + +LCAC GY H+ +H G+ I +++ + AR
Sbjct: 350 PDGITVMALLCACV-------GYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLD 402
Query: 383 LKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD--GVGNEVRRRLLELEPRGSQNLV 440
A + + + + ++L+A H +D + + + R + L+ R S N V
Sbjct: 403 FSSAMD-VFHETHDRDVVTWNSILTACVQHQ-HLEDVFKLFSLLHRSMPSLD-RISLNNV 459
Query: 441 IVANKYAEVGMWEKVSNVRRFMKNVGL 467
+ A+ AE+G +E V V + VGL
Sbjct: 460 LSAS--AELGYFEMVKQVHAYAFKVGL 484
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 158/349 (45%), Gaps = 18/349 (5%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HAQ +D + LV + S S +A L + D I W ++I G A
Sbjct: 169 QVHAQAIKWESGSDLIVQNALVTMYSKSGSVGDGFA---LFERIRDKDLISWGSIIAGLA 225
Query: 106 WSDRPREAVWVFIDMKRRGIK-PTEFTYPFVLKACAEI-SGLNEGMQVQANVTKSGLDSD 163
R +A+ +F +M G+ P EF + V +AC+ + + L G Q+ K LD +
Sbjct: 226 QQGREMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRN 285
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
Y +L Y C A KVF + +VSWN +I L EA+ F +M+D
Sbjct: 286 SYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRD 345
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G PD T++ +L AC L G+ +H L++ G + + +L+ MYA+C
Sbjct: 346 SGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSS 405
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A +F + +V TW++++ QH + E+ +LFS + S S + ++ VL A
Sbjct: 406 AMDVFHETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNNVLSASAE 465
Query: 344 AGMVEDGYRYFHEMEHVH------GIKPMRIHYHTMADILARAGHLKEA 386
G YF ++ VH G+ + + + D A+ G L +A
Sbjct: 466 LG-------YFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDA 507
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 160/349 (45%), Gaps = 50/349 (14%)
Query: 139 CAEISGLNEGMQVQANVTKSG-----LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER 193
C+ + L +G V ++ S L + +N+L+ YG C A VFD M +R
Sbjct: 52 CSRLRSLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLDR 111
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
+ VSW +I +N +A+G F M G PD+ + + AC+ELG+L LG+ VH
Sbjct: 112 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQVH 171
Query: 254 LQLI--ERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
Q I E G+ L Q AL+ MY+K G+VG LF R+ + ++ +W ++I GLAQ G
Sbjct: 172 AQAIKWESGSDLIVQ--NALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGR 229
Query: 312 AEEALELFSNMKNSSI-SPNYVTFLGVLCAC-------------------------NHAG 345
+AL++F M + PN F V AC ++AG
Sbjct: 230 EMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAG 289
Query: 346 -MVEDGYRYFHEMEHVHGI-----KPMRIHYHTMADILARAGHLKEAYTFIMNM---PFQ 396
+ D Y +E++ + P + ++++ + + G L EA M +
Sbjct: 290 CSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLR 349
Query: 397 PNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANK 445
P+ I + ALL A +DA +Q G + L++L G VIV+N
Sbjct: 350 PDGITVMALLCACVGYDALHQ---GRSIHSYLVKLGLGGD---VIVSNS 392
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 166/484 (34%), Positives = 248/484 (51%), Gaps = 14/484 (2%)
Query: 23 DLLSKARQCLSFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNL 78
+L R SF+ C K+L +IHA + S DA + L+ +C S +
Sbjct: 46 ELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLD- 104
Query: 79 TYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKA 138
AR++ + + + W +LI GYA +D P EA+ + M + KP FT+ +LKA
Sbjct: 105 --ARNVF-DQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKA 161
Query: 139 CAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSW 198
+ G Q+ A K G DVY + L+ Y C + A VFD + ++ VSW
Sbjct: 162 AGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSW 221
Query: 199 NVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
N +I+ A+ F +M GFE T V S+ LG L GKWVH +I+
Sbjct: 222 NALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIK 281
Query: 259 RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALEL 318
L +G L+DMYAK G++ AR +F R++ ++ TW++M+ AQ+G +EA+
Sbjct: 282 SRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSH 341
Query: 319 FSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILA 378
F M+ S + N +TFL +L AC+H G+V++G RYF EM + ++P HY T+ +L
Sbjct: 342 FEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYF-EMMKEYDLEPEIDHYVTVVALLG 400
Query: 379 RAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQ 437
RAG L A FI MP +P V ALL+A +H +AK VG + EL+P S
Sbjct: 401 RAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAK----VGQFAADHVFELDPDDSG 456
Query: 438 NLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAG 497
V++ N YA G W+ + VR MK G+KK SWVE+ S+H F + D+ +
Sbjct: 457 PPVLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEE 516
Query: 498 IYQI 501
IY++
Sbjct: 517 IYKM 520
>gi|356570151|ref|XP_003553254.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 465
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 171/447 (38%), Positives = 235/447 (52%), Gaps = 19/447 (4%)
Query: 38 CCSKKHLYQIHAQIQVSGL-QNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP 96
C + L Q+HAQ+ VS + D L C LS +L+ A I S P P
Sbjct: 28 CTTLDQLKQVHAQMIVSAVVATDPFAASRLFFSCALSPFGDLSLAFRIF-----HSTPRP 82
Query: 97 ----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQ 152
WN LIR A + P A+ +++ M+R + P + T+PF+LKACA + QV
Sbjct: 83 NSFMWNTLIR--AQTHAP-HALSLYVAMRRSNVLPGKHTFPFLLKACARVRSFTASQQVH 139
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
+V K GLD D + + LVR Y A +VFD+ E+ W ++ +N
Sbjct: 140 VHVIKFGLDFDSHVVDALVRCYSVSGHCVSARQVFDETPEKISSLWTTMVCGYAQNFCSN 199
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL--NCQLGTA 270
EA+ F M GFEP T+ VLSAC G L LG+ +H + +G L LGTA
Sbjct: 200 EALRLFEDMVGEGFEPGGATLASVLSACARSGCLELGERIHEFMKVKGVGLGEGVILGTA 259
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS-ISP 329
L+ MYAK G + AR LF M E NV TW+AMI GL +GY ++AL LF MK + P
Sbjct: 260 LVYMYAKNGEIAMARRLFDEMPERNVVTWNAMICGLGAYGYVDDALGLFEKMKKEGVVVP 319
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
N VTF+GVL AC HAG+++ G F M+ V+GI+P HY + D+L R G L EA
Sbjct: 320 NGVTFVGVLSACCHAGLIDVGREIFRSMKSVYGIEPKIEHYGCLVDLLGRGGWLLEAVEL 379
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
+ MP++ + ++L LL+AS I V V + +L LEP+ V ++N YAE
Sbjct: 380 VKGMPWKADVVILGTLLAASRISG---NTEVAERVVKDILALEPQNHGVHVALSNMYAEA 436
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWV 476
G W++V +R+ MK LKK G S V
Sbjct: 437 GQWQEVLRLRKTMKEERLKKAPGWSLV 463
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 241/445 (54%), Gaps = 17/445 (3%)
Query: 77 NLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGI---KPTE 129
+L YAR + D++P + W+ LI G+ R +A +F M +G+ PT
Sbjct: 288 SLLYARRVF-----DAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS 342
Query: 130 FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD 189
L+ACA + L G Q+ A + KSG+ +D+ N+L+ Y A +FD+
Sbjct: 343 IAS--ALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDE 400
Query: 190 MCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
M + VS++ +++ V+N EA F KM+ EPD TM+ ++ AC+ L L G
Sbjct: 401 MAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHG 460
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
+ H +I RG + ALIDMYAKCG + +R +F+ M ++ +W+ MI G H
Sbjct: 461 RCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIH 520
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIH 369
G +EA LF M N P+ VTF+ +L AC+H+G+V +G +FH M H +G+ P H
Sbjct: 521 GLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEH 580
Query: 370 YHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLL 429
Y M D+L+R G L EAY FI +MP + + V ALL A ++ K D +G +V R +
Sbjct: 581 YICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVY--KNID-LGKKVSRMIQ 637
Query: 430 ELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGY 489
EL P G+ N V+++N Y+ G +++ + VR K G KK G SW+E+ GS+H F G
Sbjct: 638 ELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGD 697
Query: 490 DSQVELAGIYQILETLNLHMKVLNF 514
S + IY+ L+ + + +K L +
Sbjct: 698 QSHPQSPEIYRELDNILVGIKKLGY 722
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 156/344 (45%), Gaps = 27/344 (7%)
Query: 87 NYVNDSVPIP----WNNLIRGYAWSDRPREA--VWVFIDMKRRGIKPTEFTYPFVLKACA 140
+++ D +P P +N+LIR Y+ S A + ++ M R + P +T+PF LKAC+
Sbjct: 77 HHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACS 136
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
++ + G + + +GL +D++ + L+ Y C DA +F M R +V+WN
Sbjct: 137 ALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNA 196
Query: 201 IITVCVENLWLGEAVGYFV--KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
++ + AV + + +M+ P+ +T++ +L + G L+ G VH I
Sbjct: 197 MLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIR 256
Query: 259 RGTVLN----------CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ 308
N LGTAL+DMYAKCG++ AR +F M N TWSA+I G
Sbjct: 257 ACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVL 316
Query: 309 HGYAEEALELFSNMKNSS---ISPNYVTFLGVLCAC-NHAGMVEDGYRYFHEMEHVHGIK 364
+A LF M +SP + CA +H M E H + G+
Sbjct: 317 CSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQ----LHALLAKSGVH 372
Query: 365 PMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
+++ + A+AG + +A M + + + AL+S
Sbjct: 373 ADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVSG 415
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 228/421 (54%), Gaps = 3/421 (0%)
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+D I W+ +I GYA S +A+ +F M GI+P+EFT+ V+ AC+++ EG
Sbjct: 271 SDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGK 330
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
QV + K G +S +Y LV Y C DA K FD + E +V W +I V+N
Sbjct: 331 QVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNG 390
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+A+ + +M+ G P+E TM VL AC+ L L GK +H + ++ G L +G+
Sbjct: 391 ENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGS 450
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
AL MYAKCG + L+F RM +V +W+AMI GL+Q+G +EALELF M+ P
Sbjct: 451 ALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKP 510
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
+YVTF+ +L AC+H G+VE G+ YF M G+ P HY M DIL+RAG LKEA F
Sbjct: 511 DYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEF 570
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
+ + R +L A + Y+ +G +L+EL + S V++++ Y+ +
Sbjct: 571 TESATIDHGMCLWRIILGACRNYR-NYE--LGAYAGEKLMELGSQESSAYVLLSSIYSAL 627
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
G WE V VRR MK G+ K G SW+EL +H F ++ I+ L L+ M
Sbjct: 628 GRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHVELRQLSKQM 687
Query: 510 K 510
K
Sbjct: 688 K 688
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 171/353 (48%), Gaps = 12/353 (3%)
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D++P + W +I GYA EA+ +F M+R EF + VL A
Sbjct: 165 VFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPEL 224
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
+N G Q+ K+GL S V N LV Y C DA + F+ +++ ++W+ +IT
Sbjct: 225 VNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITG 284
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
++ +A+ F M G P E T + V++AC++LG GK VH L++ G
Sbjct: 285 YAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQ 344
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+ TAL+DMYAKC ++ AR F ++E ++ W++MI G Q+G E+AL L+ M+
Sbjct: 345 IYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEM 404
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
I PN +T VL AC+ +E G + H +G ++ + A+ G LK
Sbjct: 405 EGILPNELTMASVLKACSSLAALEQG-KQIHARTVKYGFGLEVPIGSALSTMYAKCGCLK 463
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
+ MP + + I A++S S Q+G G E E++ G++
Sbjct: 464 DGTLVFRRMPAR-DVISWNAMISGLS------QNGCGKEALELFEEMQLEGTK 509
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 125/258 (48%), Gaps = 2/258 (0%)
Query: 95 IPWNNLIRGYAW--SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQ 152
+ WN +I GY+ + +F M+ P T+ V A + + G
Sbjct: 72 VSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAH 131
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
A K DV+ ++L+ Y +A KVFD M ER+ VSW +I+
Sbjct: 132 AVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAA 191
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
EA+G F M+ +E VLSA T ++ GK +H ++ G + +G AL+
Sbjct: 192 EALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALV 251
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
MYAKCG++ A F + N TWSAMI G AQ G +++AL+LFS+M S I P+
Sbjct: 252 TMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEF 311
Query: 333 TFLGVLCACNHAGMVEDG 350
TF+GV+ AC+ G +G
Sbjct: 312 TFVGVINACSDLGAAWEG 329
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 116/236 (49%), Gaps = 6/236 (2%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+H + G ++ ++ LV SS + AR +Y+ + + W ++I GY
Sbjct: 331 QVHDYLLKLGFESQIYVMTALVDMYAKCSS--IVDARKGF-DYLQEPDIVLWTSMIGGYV 387
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ +A+ ++ M+ GI P E T VLKAC+ ++ L +G Q+ A K G +V
Sbjct: 388 QNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVP 447
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
+ L Y C +D VF M R V+SWN +I+ +N EA+ F +M+ G
Sbjct: 448 IGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEG 507
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLI--ERGTVLNCQLGTALIDMYAKCG 279
+PD T + +LSAC+ +G + G W + +++ E G + ++D+ ++ G
Sbjct: 508 TKPDYVTFVNILSACSHMGLVERG-WGYFRMMFDEFGMDPRVEHYACMVDILSRAG 562
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 166/487 (34%), Positives = 249/487 (51%), Gaps = 22/487 (4%)
Query: 35 LKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP 94
+K C + +IH + GL+ D I LV C L + +A+ + +P
Sbjct: 146 IKACLDVLEIKKIHGLLFKFGLELDVFIGSALVN-CYLKFGL-MEHAQVAF-----EELP 198
Query: 95 IP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
I WN ++ GYA + + F M + P+ FT VL A + LN G
Sbjct: 199 IRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRI 258
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+ K G DS V +N+L+ YG C+ DA ++F+ M E+ + SWN I++V +
Sbjct: 259 IHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGD 318
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG------TVLN 264
+ +M G +PD T+ VL AC+ L L G+ +H +I G + +
Sbjct: 319 HDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDD 378
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
L A+IDMYAKCG++ A L+F RM +V +W+ MI+G HGY EALE+FS M
Sbjct: 379 VLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCE 438
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ P+ VTF+GVL AC+HAG V G + +M+ + + P HY + D+L RAG L
Sbjct: 439 VQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLD 498
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEV-RRRLLELEPRGSQNLVIVA 443
EAY + MP + NP+V RALL+A +H + V EV +R+ ELEP + V+++
Sbjct: 499 EAYELALTMPIEANPVVWRALLAACRLH----KHAVLAEVAAQRVFELEPEHCGSYVLMS 554
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N Y VG +E+V VR M+ ++K G SW+EL +H F S + E IY L
Sbjct: 555 NVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGLN 614
Query: 504 TLNLHMK 510
+L ++
Sbjct: 615 SLTARLR 621
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 170/366 (46%), Gaps = 15/366 (4%)
Query: 31 CLSFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
C++ L+ K+L +IH+ + ++G N + L+ S + +A SI +
Sbjct: 40 CIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLIN--MYSKCNQMNFALSIFSD 97
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
++ +N +I G+ + P E + M+ G+ P +FT+P +KAC ++ E
Sbjct: 98 PTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVL---E 154
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
++ + K GL+ DV+ + LV Y A F+++ R VV WN ++ +
Sbjct: 155 IKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQ 214
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
+ F +M D P T+ VLS +G+L+ G+ +H ++ G +
Sbjct: 215 IGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAV 274
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
+LIDMY KC + A +F M E ++++W++++ Q G + L L M + I
Sbjct: 275 SNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGI 334
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI----KPMR--IHYHTMADILARAG 381
P+ VT VL AC+H + G R H V G+ K + + + + D+ A+ G
Sbjct: 335 QPDLVTVTTVLPACSHLAALMHG-REIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCG 393
Query: 382 HLKEAY 387
+++A+
Sbjct: 394 SMRDAH 399
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 231 TTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG-TALIDMYAKCGAVGCARLLFS 289
TT + L A NLS GK +H ++ G LN L T+LI+MY+KC + A +FS
Sbjct: 38 TTCIASLQASAHHKNLSKGKEIHSYMLING-FLNSPLSITSLINMYSKCNQMNFALSIFS 96
Query: 290 R-MEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
EINV+ ++A+I G +G+ EE E + M+N + P+ TF + AC
Sbjct: 97 DPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKAC 149
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 166/487 (34%), Positives = 249/487 (51%), Gaps = 22/487 (4%)
Query: 35 LKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP 94
+K C + +IH + GL+ D I LV C L + +A+ + +P
Sbjct: 146 IKACLDVLEIKKIHGLLFKFGLELDVFIGSALVN-CYLKFGL-MEHAQVAF-----EELP 198
Query: 95 IP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
I WN ++ GYA + + F M + P+ FT VL A + LN G
Sbjct: 199 IRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRI 258
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+ K G DS V +N+L+ YG C+ DA ++F+ M E+ + SWN I++V +
Sbjct: 259 IHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGD 318
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG------TVLN 264
+ +M G +PD T+ VL AC+ L L G+ +H +I G + +
Sbjct: 319 HDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDD 378
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
L A+IDMYAKCG++ A L+F RM +V +W+ MI+G HGY EALE+FS M
Sbjct: 379 VLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCE 438
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ P+ VTF+GVL AC+HAG V G + +M+ + + P HY + D+L RAG L
Sbjct: 439 VQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLD 498
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEV-RRRLLELEPRGSQNLVIVA 443
EAY + MP + NP+V RALL+A +H + V EV +R+ ELEP + V+++
Sbjct: 499 EAYELALTMPIEANPVVWRALLAACRLH----KHAVLAEVAAQRVFELEPEHCGSYVLMS 554
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N Y VG +E+V VR M+ ++K G SW+EL +H F S + E IY L
Sbjct: 555 NVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGLN 614
Query: 504 TLNLHMK 510
+L ++
Sbjct: 615 SLTARLR 621
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 168/366 (45%), Gaps = 15/366 (4%)
Query: 31 CLSFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
C++ L+ K+L +IH+ + ++G N + L+ S + +A SI +
Sbjct: 40 CIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINM--YSKCNQMNFALSIFSD 97
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
++ +N +I G+ + P E + M+ G+ P +FT+P +KAC ++ E
Sbjct: 98 PTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVL---E 154
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
++ + K GL+ DV+ + LV Y A F+++ R VV WN ++ +
Sbjct: 155 IKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQ 214
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
+ F +M D P T+ VLS +G+L+ G+ +H ++ G +
Sbjct: 215 IGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAV 274
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
+LIDMY KC + A +F M E ++++W++++ Q G + L L M + I
Sbjct: 275 SNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGI 334
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR------IHYHTMADILARAG 381
P+ VT VL AC+H + G R H V G+ + + + D+ A+ G
Sbjct: 335 QPDLVTVTTVLPACSHLAALMHG-REIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCG 393
Query: 382 HLKEAY 387
+++A+
Sbjct: 394 SMRDAH 399
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 231 TTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG-TALIDMYAKCGAVGCARLLFS 289
TT + L A NLS GK +H ++ G LN L T+LI+MY+KC + A +FS
Sbjct: 38 TTCIASLQASAHHKNLSKGKEIHSYMLING-FLNSPLSITSLINMYSKCNQMNFALSIFS 96
Query: 290 R-MEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
EINV+ ++A+I G +G+ EE E + M+N + P+ TF + AC
Sbjct: 97 DPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKAC 149
>gi|224129982|ref|XP_002320719.1| predicted protein [Populus trichocarpa]
gi|222861492|gb|EEE99034.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 155/435 (35%), Positives = 241/435 (55%), Gaps = 19/435 (4%)
Query: 81 ARSILCNYVNDSVP------IPWNNLIRGYAWSDRPREAVW-VFIDMKRRGIKPTEFTYP 133
R L V D +P I WN+LIRGYA S+ W +F M R + ++
Sbjct: 207 GRIDLARVVFDCIPLEERNLISWNSLIRGYAQSEDGILVAWQLFAKMPERDL----ISWN 262
Query: 134 FVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER 193
++ C + + + + + + D+ + N++ Y R A +FD+M ER
Sbjct: 263 SMIDGCVKCGRMEDAQGLFDRMP----NRDIVSWANMIDGYAKNGRVDIARSLFDEMPER 318
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLG-FEPDETTMLVVLSACTELGNLSLGKWV 252
VV++N ++ V+N + EA+G F M+ G F D T+L+ LSA +LG++ G +
Sbjct: 319 DVVAYNAMMGGYVQNGYCMEALGIFYGMQSDGNFLLDNATLLIALSAIAQLGHIDKGVAI 378
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H + E G L+ +LG ALIDMY+KCG++ A ++F ++E +V W+A+I GLA HG
Sbjct: 379 HRFIEEIGFSLDGRLGVALIDMYSKCGSIENAMMVFENIKEKSVDHWNAIIGGLAIHGLG 438
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
E A + M+ + P+ +TF+G+L AC HAG+V++G F M VH ++P HY
Sbjct: 439 ELAFDFLMEMERMRVEPDDITFIGLLNACGHAGLVKEGMMCFELMRRVHKVEPKLQHYGC 498
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELE 432
M DIL RAGH++EA F+ MPF+PN ++ R+LLSA H++ VG V L+ L+
Sbjct: 499 MVDILGRAGHIEEAKNFVEEMPFEPNDVIWRSLLSACKTHESF---NVGQPVAENLMRLD 555
Query: 433 PRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQ 492
+ V+ +N YA +G W V VR MK LKK+ G SW+EL G ++ F+ S
Sbjct: 556 SPSPSSYVLASNMYAGLGKWNDVRKVRAMMKQKNLKKIPGCSWIELEGHVYAFFVQDKSH 615
Query: 493 VELAGIYQILETLNL 507
+ +GIY IL++L++
Sbjct: 616 PQFSGIYSILDSLSM 630
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 206/488 (42%), Gaps = 73/488 (14%)
Query: 19 NCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSG-LQNDAQILKELVRFCTLSSSKN 77
N N + A L LK C + QIHA++ +G ++N K ++ F T +
Sbjct: 6 NLNQQPWNSAIPTLVLLKKCKRLSDINQIHARLLTTGFIKNTFLTTKIILSFSTSLHAPL 65
Query: 78 LTYARSILCNY----------VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKP 127
+ +AR I + + P WN +I+ Y+ P+EA+W+ M G
Sbjct: 66 IEFARFIFFRHHAFEFDEKEEEEEKDPFLWNAIIKTYSHGHDPKEAMWLVSLMLENGAFA 125
Query: 128 TEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVF 187
+FT VLKAC+ + + EGMQ+ + K SD++ N L+ FY C A +VF
Sbjct: 126 DKFTLSLVLKACSRVGLVKEGMQIHGLLKKLEFGSDLFLQNCLISFYVKCGCLVRASQVF 185
Query: 188 DDMCERSVVSWNVIITVCVENLWLGEAVGYF----VKMKDL--------GFEPDETTMLV 235
D M +R VS+N +I V+ + A F ++ ++L G+ E +LV
Sbjct: 186 DRMPKRDSVSYNSMIDGYVKGGRIDLARVVFDCIPLEERNLISWNSLIRGYAQSEDGILV 245
Query: 236 VLSACTELGNLSLGKWVHL--------------QLIERGTVLNCQLGTALIDMYAKCGAV 281
++ L W + L +R + +ID YAK G V
Sbjct: 246 AWQLFAKMPERDLISWNSMIDGCVKCGRMEDAQGLFDRMPNRDIVSWANMIDGYAKNGRV 305
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK-NSSISPNYVTFLGVLCA 340
AR LF M E +V ++AM+ G Q+GY EAL +F M+ + + + T L L A
Sbjct: 306 DIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFYGMQSDGNFLLDNATLLIALSA 365
Query: 341 CNHAGMVEDG---YRYFHE--------------------------MEHVHGIKPMRI-HY 370
G ++ G +R+ E M IK + H+
Sbjct: 366 IAQLGHIDKGVAIHRFIEEIGFSLDGRLGVALIDMYSKCGSIENAMMVFENIKEKSVDHW 425
Query: 371 HTMADILARAGHLKEAYTFIMNMP---FQPNPIVLRALLSASSIHDAKYQDGVG-NEVRR 426
+ + LA G + A+ F+M M +P+ I LL+A H ++G+ E+ R
Sbjct: 426 NAIIGGLAIHGLGELAFDFLMEMERMRVEPDDITFIGLLNACG-HAGLVKEGMMCFELMR 484
Query: 427 RLLELEPR 434
R+ ++EP+
Sbjct: 485 RVHKVEPK 492
>gi|449447707|ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
gi|449510706|ref|XP_004163739.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
Length = 563
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 261/515 (50%), Gaps = 49/515 (9%)
Query: 35 LKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP 94
L+ C + HL Q+ + G +LVRFC L+ + +L YAR I N + +V
Sbjct: 50 LEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLA-DLCYARYIFDNLTSPNVF 108
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ + +I YA P+ A ++ +M RRG I+P F YP VL++C ++ G N V
Sbjct: 109 L-YTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGSNATKMVHT 167
Query: 154 NVTKSGLDSDVYTNNNLVRFY-------GSCRRKRD------------------------ 182
V KSG +V Y GS R+ D
Sbjct: 168 QVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMISGYARLGNFD 227
Query: 183 -ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE---------PDETT 232
A ++F+ M ER V +WN +I C +N + EA+ F +M L E P++TT
Sbjct: 228 SAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKRMVLLALEGNNNDRENKPNKTT 287
Query: 233 MLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME 292
+ LSAC G L LGKW+H + + + + AL+DMY KCG + AR +F +
Sbjct: 288 LGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDMIT 347
Query: 293 EINVWTWSAMILGLAQHGYAEEALELFSNMKN--SSISPNYVTFLGVLCACNHAGMVEDG 350
N+ +W+++I LA HG++ A++LF+ + + + PN VTF+GVL AC H G+VE G
Sbjct: 348 LKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNACTHGGLVEKG 407
Query: 351 YRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASS 410
Y YF M + I+P H+ + D+L RAG +EA + M +P+ +V +LL+A
Sbjct: 408 YSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNACK 467
Query: 411 IHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKM 470
IH + + ++L+E++P+ +++AN YAE G W++V VRR +K K
Sbjct: 468 IHG---RSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKEKNAYKT 524
Query: 471 KGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
G SW+E+ +++FYS S + IY+ LE++
Sbjct: 525 PGCSWIEVDNQVYQFYSFDMSHPSVEEIYKTLESM 559
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 150/454 (33%), Positives = 248/454 (54%), Gaps = 10/454 (2%)
Query: 59 DAQILKELVRF-CTLSS---SKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAV 114
D ++K+ + + C +S+ S + AR + + + D + WN +I YA + +
Sbjct: 155 DGILVKDTIAYNCLISAYSRSGEVLAARELF-DKMRDRSIVSWNAMISCYAQNGDYHKGW 213
Query: 115 WVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFY 174
+F M+ +P E T VL CA++ L G++++ L S++ + ++ Y
Sbjct: 214 IIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMY 273
Query: 175 GSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTML 234
C D VFD M R VV+W+ +I +N EA+ F MK +P++ T++
Sbjct: 274 VKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLV 333
Query: 235 VVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI 294
VLSAC +LG++ G+ + + RG + N + +AL+ MY+KCG + AR +F ++ +
Sbjct: 334 SVLSACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQR 393
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYF 354
+ TW++MI+GLA +G+AE+A+ L++ MK + PN +TF+G++ AC HAG VE G +F
Sbjct: 394 DNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFF 453
Query: 355 HEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH-D 413
M H I P H+ + D+ R+G L +AY FI M +PN ++ LLSAS IH +
Sbjct: 454 RSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLN 513
Query: 414 AKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGM 473
+ + G ++LLELEP S N VI++N YA G W++ VR+ MK+ ++K
Sbjct: 514 VELAELAG----KKLLELEPDNSGNYVILSNIYASAGRWQEALKVRKLMKDKRVQKAAAY 569
Query: 474 SWVELGGSIHRFYSGYDSQVELAGIYQILETLNL 507
SWVE+ +H+F G S +Y ++ L L
Sbjct: 570 SWVEVEDRVHKFLVGDTSHPRSDEVYSTIDGLAL 603
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 127/440 (28%), Positives = 205/440 (46%), Gaps = 49/440 (11%)
Query: 29 RQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
R + L L QI A I + L ++ L+ ++ + YAR +
Sbjct: 3 RYLIDLLHCSLPINQLKQIQALIIIKYLSLTPLFIRRLL------NASFIQYARQVF--- 53
Query: 89 VNDSVPIPWN----NLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
D +P P + I Y+ EA+ F+ M + ++ FT P + K+CA +
Sbjct: 54 --DQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKSCASLLA 111
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFY------GSCRRKRD---------------- 182
++ G QV + V + G S V+ N L+ FY GS D
Sbjct: 112 IDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISA 171
Query: 183 ---------ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTM 233
A ++FD M +RS+VSWN +I+ +N + F +M+D EP+E T+
Sbjct: 172 YSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITL 231
Query: 234 LVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEE 293
VLS C +LG+L +G + + N + TA+++MY KCGAV RL+F M
Sbjct: 232 ATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMAR 291
Query: 294 INVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRY 353
+V TWSAMI G AQ+G + EALELF NMK++ I PN VT + VL AC G VE G R
Sbjct: 292 RDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERI 351
Query: 354 FHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHD 413
+E I + + + + ++ G++ +A +P Q + + +++ +I +
Sbjct: 352 GSYVESRGLISNVYVA-SALLGMYSKCGNIIKARQIFDKLP-QRDNVTWNSMIMGLAI-N 408
Query: 414 AKYQDGVGNEVRRRLLELEP 433
+D + R + +E++P
Sbjct: 409 GFAEDAIALYNRMKEIEVKP 428
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 172/513 (33%), Positives = 259/513 (50%), Gaps = 56/513 (10%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCT-LSSSKNLTYARSILCNYVNDSVPIP 96
C S L Q H+QI GL + ++ L+ FC S+S LTYA + DS+P P
Sbjct: 32 CQSMSQLRQYHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLF-----DSIPQP 86
Query: 97 ----WNNLIRGYAWSDR-PREAVWV-FIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
+N +I+G+ S P ++ + + M + + P FT+P +L AC +I GMQ
Sbjct: 87 DAFLYNTIIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIACRKI---QHGMQ 143
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD--------------------- 189
+ A++ K G + N+L+ Y + + +A +VF
Sbjct: 144 IHAHLFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLISGYSKWGL 203
Query: 190 ----------MCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEP-DETTMLVVLS 238
M +++ SWN ++ V+ EA F +MK D+ +LS
Sbjct: 204 IDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLS 263
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVW- 297
ACT LG L GKW+H + G L+ +L TA++DMY KCG + A +F + W
Sbjct: 264 ACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCRWI 323
Query: 298 -TWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
+W+ MI GLA HG E A++LF M+ ++P+ +TFL +L AC H+G+VE+G YF
Sbjct: 324 SSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSY 383
Query: 357 MEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKY 416
M V+GI+P H+ M D+L RAG + EA I MP P+ VL LL A H
Sbjct: 384 MIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGACKKHR--- 440
Query: 417 QDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWV 476
+G E+ RR++ELEP S V++AN YA G WE + VR+ M + G+KK G S +
Sbjct: 441 NIELGEEIGRRVIELEPNNSGRYVLLANLYANAGKWEDAAKVRKLMDDRGVKKAPGFSMI 500
Query: 477 ELGGSIHRFYSGYDSQVEL----AGIYQILETL 505
EL G++H F +G + + A +Y++LE L
Sbjct: 501 ELQGTVHEFIAGERNHPQAKELHAKVYEMLEHL 533
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 19/204 (9%)
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRD------ACKV 186
PF + C +S L Q + + + GL S + L+ F C R A K+
Sbjct: 26 PFHFEKCQSMSQLR---QYHSQIIRLGLSSHNHLIPPLINF---CARASTSDALTYALKL 79
Query: 187 FDDMCERSVVSWNVIITVCVENLWL--GEAVGYFVKMKDLGFEPDETTMLVVLSACTELG 244
FD + + +N II + + L + + M P+ T +L AC ++
Sbjct: 80 FDSIPQPDAFLYNTIIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIACRKIQ 139
Query: 245 NLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMIL 304
+ G +H L + G + +LI MY A+ AR +F + + +W+++I
Sbjct: 140 H---GMQIHAHLFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLIS 196
Query: 305 GLAQHGYAEEALELFSNM--KNSS 326
G ++ G +EA +F M KNS+
Sbjct: 197 GYSKWGLIDEAFTIFQLMPQKNSA 220
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 150/400 (37%), Positives = 227/400 (56%), Gaps = 19/400 (4%)
Query: 95 IPWNNLIRGYAWSD-RPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ W ++ A +D R EA+ + M R G+ P +T+ VL AC L + A
Sbjct: 147 VTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSVLGACGTPGVL---AALHA 203
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+ K GLDSDV+ ++L+ Y +VFD+M R +V WN II ++ G+
Sbjct: 204 STVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQS---GD 260
Query: 214 AVG---YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLI--ERGTVLNCQLG 268
VG F++MKD GF ++ T+ VL ACT + L G+ VH ++ ER +L+
Sbjct: 261 GVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVLKYERDLILH---- 316
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
AL+DMY KCG++ A LF RM + +V +WS MI GLAQ+G + EAL +F MK+ ++
Sbjct: 317 NALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVA 376
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
PN +T +GVL AC+HAG+VEDG+ YF M+ + GI+P R H++ M D+L RAG L EA
Sbjct: 377 PNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVE 436
Query: 389 FIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAE 448
FI +M +P+ ++ R LL A +H + + R +L+LEP V+++N YA+
Sbjct: 437 FIRDMNLEPDAVIWRTLLGACRMHKSG---NLAAYAAREILKLEPDDQGARVLLSNTYAD 493
Query: 449 VGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
+ W + M++ G+KK G SW+EL +H F +G
Sbjct: 494 LRQWTDAEKSWKAMRDRGMKKEPGRSWIELEKHVHVFIAG 533
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 126/271 (46%), Gaps = 18/271 (6%)
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE-NLWLGEAVGY 217
G ++ +N+LV Y DA ++FD M ER+VV+W ++ + EA+ +
Sbjct: 110 GAGGGIFVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRF 169
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
V M G P+ T VL AC G L+ +H ++ G + + ++LID Y K
Sbjct: 170 LVAMWRDGVAPNAYTFSSVLGACGTPGVLAA---LHASTVKVGLDSDVFVRSSLIDAYMK 226
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
G + R +F M ++ W+++I G AQ G A+ELF MK++ S N T V
Sbjct: 227 LGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSV 286
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMR--IHYHTMADILARAGHLKEAYTFIMNMPF 395
L AC M+E G + H H +K R I ++ + D+ + G L++A MP
Sbjct: 287 LRACTGMVMLEAGRQV-----HAHVLKYERDLILHNALLDMYCKCGSLEDAEALFHRMP- 340
Query: 396 QPNPIVLRALLSASSIHDAKYQDGVGNEVRR 426
R ++S S++ Q+G E R
Sbjct: 341 ------QRDVISWSTMISGLAQNGKSAEALR 365
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT--------ALIDMYAKC 278
+P T LV L C G G+ +H + G + + G +L+ MYAK
Sbjct: 71 DPVSLTRLVKL--CVRHGTAGDGRLIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKF 128
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQ-HGYAEEALELFSNMKNSSISPNYVTFLGV 337
G + A LF RM E NV TW+ ++ LA G EEAL M ++PN TF V
Sbjct: 129 GLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSV 188
Query: 338 LCACNHAGMV 347
L AC G++
Sbjct: 189 LGACGTPGVL 198
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 157/473 (33%), Positives = 241/473 (50%), Gaps = 39/473 (8%)
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
+L A+ L N + + + WN +I GYA EA +F M I+ EFT+ V+
Sbjct: 238 DLDAAKEFL-NGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVI 296
Query: 137 KACAEISGLNEGMQVQA----NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
CA G ++ A V D + NN L+ FY C + A ++F+ M E
Sbjct: 297 SVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPE 356
Query: 193 RSVVSWNVIIT-----VCVENL--------------WL------------GEAVGYFVKM 221
R +VSWN+I++ C++ W+ EA+ +F +M
Sbjct: 357 RDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRM 416
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
K GFEP + + +C+ LG+L G+ +H Q++ G + G ALI MYA+CG V
Sbjct: 417 KLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVV 476
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
A LF M ++ +W+AMI L QHG +A+ELF M I P+ ++FL V+ AC
Sbjct: 477 DAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISAC 536
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIV 401
+HAG+V++G +YF M +V+G+ P HY + D+L RAG EA + +MPF+P +
Sbjct: 537 SHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPI 596
Query: 402 LRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRF 461
ALL+ IH +G E RL EL+P+ V+++N YA G W ++ VR+
Sbjct: 597 WEALLAGCRIHG---NIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKL 653
Query: 462 MKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
M++ G+KK G SW+E+ +H F G + E+ IY LE L L M+ + +
Sbjct: 654 MRDRGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEMRKIGY 706
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 182/483 (37%), Gaps = 132/483 (27%)
Query: 33 SFLKLCCSKKHLY-----QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
S L++CC + + +HA + SG Q IL L+ S S L YAR
Sbjct: 16 SLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDI--YSKSSKLNYAR----- 68
Query: 88 YVNDSVPIP-------------------------------------WNNLIRGYAWSDRP 110
Y+ D +P P +N +I Y+ +
Sbjct: 69 YLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDG 128
Query: 111 REAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG-MQVQANVTKSGLDSDVYTNNN 169
A+ +F DM+R +P +T+ VL A A ++ + Q+ V KSG N
Sbjct: 129 HAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNA 188
Query: 170 LVRFYGSCRRKR---------DACKVFDDMCERSVVSWNVIITVCVEN------------ 208
L+ Y C +A K+FD+M R +SW IIT V+N
Sbjct: 189 LISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNG 248
Query: 209 --------------------LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSL 248
L+L EA F KM + DE T V+S C G L
Sbjct: 249 TSKKLGVAWNAMISGYAHRGLYL-EAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRL 307
Query: 249 GKWVHLQLIERGTVLN------CQLGTALIDMYAKCGAVGCARLLFSR------------ 290
GK +H ++ TV N + ALI Y KCG V A+ +F++
Sbjct: 308 GKEMHAYFLK--TVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNII 365
Query: 291 -------------------MEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
M E N+ +W MI GLAQ G+AEEAL+ F+ MK P
Sbjct: 366 LSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCD 425
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
F G + +C+ G ++ G R H +G + + + + AR G + A+ +
Sbjct: 426 YAFAGAIISCSVLGSLKHG-RQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFI 484
Query: 392 NMP 394
NMP
Sbjct: 485 NMP 487
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 263/504 (52%), Gaps = 30/504 (5%)
Query: 19 NCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNL 78
N N +L K ++C + L Q+HAQ+ +GL L L+ SS
Sbjct: 3 NLNHPILQKLQKCHNL-------NTLKQVHAQMLTTGLSFQTYYLSHLL---NTSSKFAS 52
Query: 79 TYARSILCNYVNDSVPIPWNNLIRGYAW-SDRPREAVWVFID-MKRRGIKPTEFTYPFVL 136
TYA +I N++ + +N LI SD+ A ++ + + ++P FT+P +
Sbjct: 53 TYAFTIF-NHIPNPTLFLYNTLISSLTHHSDQIHLAFSLYNHILTHKTLQPNSFTFPSLF 111
Query: 137 KACAEISGLNEGMQVQANVTKS-GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSV 195
KACA L G + A+V K D + N+L+ FY + + +FD + E +
Sbjct: 112 KACASHPWLQHGPPLHAHVLKFLQPPYDPFVQNSLLNFYAKYGKLCVSRYLFDQISEPDL 171
Query: 196 VSWNVII------------TVCVENLWLG-EAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
+WN ++ + E+ + EA+ F M+ +P+E T++ ++SAC+
Sbjct: 172 ATWNTMLAAYAQSASHVSYSTSFEDADMSLEALHLFCDMQLSQIKPNEVTLVALISACSN 231
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
LG LS G W H ++ LN +GTAL+DMY+KCG + A LF + + + + ++AM
Sbjct: 232 LGALSQGAWAHGYVLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDELSDRDTFCYNAM 291
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
I G A HG+ +ALEL+ NMK + P+ T + + AC+H G+VE+G F M+ VHG
Sbjct: 292 IGGFAVHGHGNQALELYRNMKLEDLVPDGATIVVTMFACSHGGLVEEGLEIFESMKGVHG 351
Query: 363 IKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGN 422
++P HY + D+L RAG LKEA + +MP +PN I+ R+LL A+ +H +G
Sbjct: 352 MEPKLEHYGCLIDLLGRAGRLKEAEERLQDMPMKPNAILWRSLLGAAKLHG---NLEMGE 408
Query: 423 EVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSI 482
+ L+ELEP S N V+++N YA +G W V VR MK+ G+ K+ G S VE+ G++
Sbjct: 409 AALKHLIELEPETSGNYVLLSNMYASIGRWNDVKRVRMLMKDHGVDKLPGFSLVEINGAM 468
Query: 483 HRFYSGYDSQVELAGIYQILETLN 506
H F +G + IY + +N
Sbjct: 469 HEFLTGDKAHPFSKEIYSKIGEIN 492
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 148/448 (33%), Positives = 239/448 (53%), Gaps = 10/448 (2%)
Query: 62 ILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMK 121
++ L+R + S+ L Y + + I W +I G+ + REA+ +F +M+
Sbjct: 214 LIAGLMRCSRIEDSRQLFYD-------MQEKDSISWTAMIAGFTQNGLDREAIDLFREMR 266
Query: 122 RRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKR 181
++ ++T+ VL AC + L EG QV A + ++ +++ + LV Y C+ +
Sbjct: 267 LENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIK 326
Query: 182 DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
A VF M ++VVSW ++ +N + EAV F M++ G EPD+ T+ V+S+C
Sbjct: 327 SAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCA 386
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
L +L G H + + G + + AL+ +Y KCG++ + LFS M ++ +W+A
Sbjct: 387 NLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTA 446
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
++ G AQ G A E L LF +M P+ VTF+GVL AC+ AG+V+ G + F M H
Sbjct: 447 LVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEH 506
Query: 362 GIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVG 421
I P+ HY M D+ +RAG L+EA FI MPF P+ I +LLS+ H +G
Sbjct: 507 RIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNM---EIG 563
Query: 422 NEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGS 481
LL+LEP + + +++++ YA G WE+V+N+R+ M++ GL+K G SW++
Sbjct: 564 KWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQ 623
Query: 482 IHRFYSGYDSQVELAGIYQILETLNLHM 509
+H F + S IY LE LN M
Sbjct: 624 VHIFSADDQSNPFSDQIYSELEKLNYKM 651
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 119/251 (47%), Gaps = 15/251 (5%)
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV-GYFVKM 221
++Y+ N L+ Y + +VF M R +VSWN +I+ +L ++V Y + +
Sbjct: 74 NLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLML 133
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
+ F + + +L ++ G + LG VH +++ G +G+ L+DMY+K G V
Sbjct: 134 YNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLV 193
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
CAR F M E NV ++ +I GL + E++ +LF +M+ + +++ ++
Sbjct: 194 FCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEK----DSISWTAMIAGF 249
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL------KEAYTFIMNMPF 395
G+ + F EM ++ + + +T +L G + K+ + +I+ +
Sbjct: 250 TQNGLDREAIDLFREMR----LENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDY 305
Query: 396 QPNPIVLRALL 406
Q N V AL+
Sbjct: 306 QDNIFVGSALV 316
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 160/472 (33%), Positives = 248/472 (52%), Gaps = 8/472 (1%)
Query: 40 SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN-DSVPIPWN 98
S KH +IH I + D + L+ +++ A+ LC + D+V
Sbjct: 275 SLKHCKEIHGYIIRHAVVLDVFLKSALIDI--YFKCRDVEMAQKNLCQSSSFDTVVC--T 330
Query: 99 NLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
+I GY + + +EA+ F + + +KPT T+ + A A ++ LN G ++ ++ K+
Sbjct: 331 TMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKT 390
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
LD + + ++ Y C R AC+VF+ + E+ + WN +IT C +N GEA+ F
Sbjct: 391 KLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLF 450
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
+M G D ++ LSAC L L GK +H +I+ + ++LIDMYAKC
Sbjct: 451 RQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKC 510
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
G + +R +F RM+E N +W+++I HG +E L LF M + I P++VTFLG++
Sbjct: 511 GNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGII 570
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
AC HAG V++G RY+H M +GI HY +AD+ RAG L EA+ I +MPF P+
Sbjct: 571 SACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPD 630
Query: 399 PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
V LL A IH V + + L +L+P S V++AN A G W KV V
Sbjct: 631 AGVWGTLLGACHIHGNVELAEVAS---KHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKV 687
Query: 459 RRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
R MK G++K+ G SW+E+ + H F + S A IY +L++L L +K
Sbjct: 688 RSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELK 739
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 138/276 (50%), Gaps = 7/276 (2%)
Query: 67 VRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIK 126
VR +L +KNL Y + C WN +IRG+ + A+ ++ M G+
Sbjct: 3 VRTGSLKDAKNLFYTLQLGCTSA-------WNWMIRGFTMMGQFNYALLFYLKMLGAGVS 55
Query: 127 PTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKV 186
P ++T+P+V+KAC + + G V V GL DV+ ++L++ Y DA +
Sbjct: 56 PDKYTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYL 115
Query: 187 FDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNL 246
FD++ ++ V WNV++ V+N G A+ F++M+ +P+ T VLS C L
Sbjct: 116 FDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAML 175
Query: 247 SLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGL 306
LG +H + G L+ + L+ MY+KC + AR LF + + ++ +W+ +I G
Sbjct: 176 DLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGY 235
Query: 307 AQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
Q+G EA LF M ++ I P+ +TF L N
Sbjct: 236 VQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVN 271
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 150/313 (47%), Gaps = 14/313 (4%)
Query: 35 LKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+K CC K + +H + + GL+ D + L++ + + +L+ A+ Y+ D
Sbjct: 65 VKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKL--YAENGHLSDAQ-----YLFD 117
Query: 92 SVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
++P + WN ++ GY + A+ +F++M+ IKP T+ VL CA + L+
Sbjct: 118 NIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDL 177
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G Q+ GL+ D N L+ Y C+ + A K+FD + + +VSWN II+ V+
Sbjct: 178 GTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQ 237
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
N +GEA F M G +PD T L EL +L K +H +I VL+ L
Sbjct: 238 NGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFL 297
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
+ALID+Y KC V A+ + + + MI G +G +EALE F + +
Sbjct: 298 KSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERM 357
Query: 328 SPNYVTFLGVLCA 340
P VTF + A
Sbjct: 358 KPTSVTFSSIFPA 370
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 7/183 (3%)
Query: 181 RDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
+DA +F + +WN +I A+ +++KM G PD+ T V+ AC
Sbjct: 9 KDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKAC 68
Query: 241 TELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
L ++ +GK VH + G + +G++LI +YA+ G + A+ LF + + + W+
Sbjct: 69 CGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWN 128
Query: 301 AMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHV 360
M+ G ++G + A+++F M++S I PN VTF VL C M++ G + +
Sbjct: 129 VMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ-------L 181
Query: 361 HGI 363
HGI
Sbjct: 182 HGI 184
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MY + G++ A+ LF ++ W+ MI G G AL + M + +SP+ T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
F V+ AC V+ G + HE ++ G+K ++ + A GHL +A N+
Sbjct: 61 FPYVVKACCGLKSVKMG-KIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119
Query: 394 PFQPNPIVLRALLSA 408
P Q + ++ +L+
Sbjct: 120 P-QKDSVLWNVMLNG 133
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 165/474 (34%), Positives = 256/474 (54%), Gaps = 59/474 (12%)
Query: 81 ARSILCNYVNDSVPIP------WNNLIRGYAWSDRPR-------EAVWVFIDMKRRGIKP 127
A++I C + + + P WNNLIR S R R A+ +++ M+ + P
Sbjct: 5 AKAISCTHPSLHLSHPNIESFVWNNLIRA---STRSRVQNPAFPPALSLYLRMRLHAVLP 61
Query: 128 TEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSC------RRKR 181
T+PF+L++ I+ + G Q+ A + GL +D + +L+ Y SC R+
Sbjct: 62 DLHTFPFLLQS---INTPHRGRQLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAF 118
Query: 182 D-------------------------ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
D A K+FD M E++V+SW+ +I V A+
Sbjct: 119 DEITQPDLPSWNAIIHANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALS 178
Query: 217 YFVKMKDL---GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
F ++ L P+E TM VLSAC LG L GKWVH + + G ++ LGT+LID
Sbjct: 179 LFRSLQTLEGSQLRPNEFTMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLID 238
Query: 274 MYAKCGAVGCARLLFSRM-EEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
MYAKCG++ A+ +F + E +V WSAMI + HG +EE LELF+ M N + PN V
Sbjct: 239 MYAKCGSIERAKCIFDNLGPEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAV 298
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
TF+ VLCAC H G+V +G YF M + +G+ PM HY M D+ +RAG +++A+ + +
Sbjct: 299 TFVAVLCACVHGGLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKS 358
Query: 393 MPFQPNPIVLRALLSASSIHDAKYQDGVGNEVR-RRLLELEPRGSQNLVIVANKYAEVGM 451
MP +P+ ++ ALL+ + IH D E+ +LLEL+P S V+++N YA++G
Sbjct: 359 MPMEPDVMIWGALLNGARIHG----DVETCEIAITKLLELDPANSSAYVLLSNVYAKLGR 414
Query: 452 WEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
W +V ++R M+ G+KK+ G S VE+ G I F++G +S EL +Y +L+ +
Sbjct: 415 WREVRHLRDLMEVRGIKKLPGCSLVEVDGVIREFFAGDNSHPELLNLYVMLDEI 468
>gi|297819366|ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323404|gb|EFH53825.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 591
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 247/480 (51%), Gaps = 10/480 (2%)
Query: 41 KKHLYQIHAQIQVSGLQNDAQILKELVRFCTLS-SSKNLTYARSILCNYVNDSVPIPWNN 99
K HL QIHA + + L ++ + LS +++ Y+ + +N ++ N
Sbjct: 24 KLHLRQIHAVLLRTSLIRNSDVFHHFFSRLALSLIPRDINYSCRVFSQRLNPTLS-HCNT 82
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTE-FTYPFVLKACAEISGLNEGMQVQANVTKS 158
+IR ++ S P E +F ++R P + F LK C + L G+Q+ +
Sbjct: 83 MIRAFSLSQTPCEGFRLFRALRRNISFPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSD 142
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
G SD L+ Y +C DACKVFD++ +R VSWNV+I+ + N + + F
Sbjct: 143 GFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPQRDTVSWNVLISCYLRNKRTRDVLVLF 202
Query: 219 VKMK---DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY 275
KMK D +PD T L+ L AC LG L GK VH + E G L L+ MY
Sbjct: 203 DKMKNDVDRCVKPDNVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMY 262
Query: 276 AKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFL 335
++CG++ A +F+RM E NV +W+AMI GLA +G+ +EA+E F+ M ISP T
Sbjct: 263 SRCGSMDKAYEVFNRMRERNVVSWTAMISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLT 322
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVH-GIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
G+L AC+H+G+V++G +F M IKP HY + D+L RA L +AY+ I +M
Sbjct: 323 GLLSACSHSGLVDEGMMFFDRMRSGEFKIKPNLHHYGCIVDLLGRARLLDKAYSLIKSME 382
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
+P+ + R LL A +H +G V L+E + + + V++ N Y+ VG WEK
Sbjct: 383 MKPDSTIWRTLLGACRVHG---NVELGERVIAHLIEFKAEEAGDYVLLLNTYSSVGKWEK 439
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
V+ +R MK ++ G S +EL G++H F S IY++L +N +K+ +
Sbjct: 440 VTELRSLMKKKRIQTNPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGY 499
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 159/487 (32%), Positives = 255/487 (52%), Gaps = 17/487 (3%)
Query: 35 LKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LKLC +K L Q HAQI + GL+ D +L + S ++ +AR + D
Sbjct: 71 LKLCAKRKLLLQGKACHAQILLMGLKTD--LLTSNILINMYSKCGSVDFARQVF-----D 123
Query: 92 SVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+P + WN +I + EA+ + + M+R G +EFT VL ACA L+E
Sbjct: 124 EMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSE 183
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
+ A K+ +D +V+ L+ Y C +DA VF+ M +RSVV+W+ + V+
Sbjct: 184 CQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQ 243
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
N +A+ F K + G + D+ M V+ AC L + GK V+ L + G N +
Sbjct: 244 NEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFV 303
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
++LIDMYAKCG + + +F +E+ NV W+AMI GL++H + E + LF M+ +
Sbjct: 304 ASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGL 363
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
SPN VTF+ VL AC H G+V+ G +YF M H + P HY M D L+RAG + EAY
Sbjct: 364 SPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAY 423
Query: 388 TFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYA 447
I +PF + + +LL++ H + ++L ++EP S N ++++N YA
Sbjct: 424 DLISKLPFNASASMWGSLLASCRTHG---NLELAEVAAKKLFDIEPHNSGNYLLLSNMYA 480
Query: 448 EVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNL 507
G W++V+ +R+ +K +KK +G SW+E+ +H F G + ++ IY L +
Sbjct: 481 ANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMD 540
Query: 508 HMKVLNF 514
++ L +
Sbjct: 541 ELQKLGY 547
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 139/279 (49%), Gaps = 4/279 (1%)
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
+LK CA+ L +G A + GL +D+ T+N L+ Y C A +VFD+M RS
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHL 254
+VSWN +I +N EA+ ++M+ G E T+ VL AC LS + +H
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189
Query: 255 QLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEE 314
I+ LN + TAL+D+YAKCG + A +F M + +V TWS+M G Q+ E+
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249
Query: 315 ALELFSNMKNSSISPNYVTFLGVLCAC-NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
AL LF + + + V+CAC A M+E + + + G ++
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEG--KQVNALLSKSGFCSNIFVASSL 307
Query: 374 ADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
D+ A+ G ++E+Y ++ + N ++ A++S S H
Sbjct: 308 IDMYAKCGGIEESYKVFRDVE-KRNVVLWNAMISGLSRH 345
>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
Length = 766
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 162/463 (34%), Positives = 247/463 (53%), Gaps = 9/463 (1%)
Query: 52 QVSGLQNDAQILKELVRFCTLSS----SKNLTYARSILCNYVNDSVPIPWNNLIRGYAWS 107
Q+ GL ++ ++L C+LS KNL AR + + + WN+++ Y+
Sbjct: 275 QIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSAR-VAFYRIEAPDLVSWNSIVNAYSVE 333
Query: 108 DRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTN 167
EA+ +F +M+ G++P T +L AC L G + + + K GLD DV
Sbjct: 334 GLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVC 393
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
N+L+ Y C A VF ++ ++ VV+WN I+T C ++ E + F +
Sbjct: 394 NSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPS 453
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
D ++ VLSA ELG + K VH + G V + L LID YAKCG++ A L
Sbjct: 454 LDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRL 513
Query: 288 FSRM-EEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
F M +V++WS++I+G AQ GYA+EA +LFS M++ I PN+VTF+GVL AC+ G
Sbjct: 514 FEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGF 573
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALL 406
V +G Y+ ME +GI P R H + D+LARAG L EA FI MPF+P+ I+ + LL
Sbjct: 574 VNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLL 633
Query: 407 SASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVG 466
+AS +H+ +G +L ++P S V++ N YA G W + + +++ M+ G
Sbjct: 634 AASKMHNDME---MGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSG 690
Query: 467 LKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
+KK G SWV+L G + F S E IY +LE + + M
Sbjct: 691 VKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELIGMEM 733
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 162/349 (46%), Gaps = 19/349 (5%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HA S +D + LV T+ S L +L + D I W ++I G+A
Sbjct: 173 QVHAHALKSERGSDLIVQNALV---TMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFA 229
Query: 106 WSDRPREAVWVFIDMKRRGIK-PTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDV 164
EA+ VF +M G P EF + +AC + G Q+ K LD D+
Sbjct: 230 QQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDL 289
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV-CVENLWLGEAVGYFVKMKD 223
Y +L Y C+ A F + +VSWN I+ VE L L EA+ F +M+D
Sbjct: 290 YVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGL-LSEALVLFSEMRD 348
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G PD T+ +L AC L G+ +H L++ G + + +L+ MYA+C +
Sbjct: 349 SGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSS 408
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A +F +++ +V TW++++ AQH + EE L+LFS + S S + ++ VL A
Sbjct: 409 AMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAE 468
Query: 344 AGMVEDGYRYFHEMEHVH------GIKPMRIHYHTMADILARAGHLKEA 386
G YF ++ VH G+ R+ +T+ D A+ G L +A
Sbjct: 469 LG-------YFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDA 510
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 176/382 (46%), Gaps = 19/382 (4%)
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
P+ W ++I + + R +A+ +F M R G +F ++AC E+ + G QV A
Sbjct: 117 PVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHA 176
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+ KS SD+ N LV Y D +F+ + ++ ++SW II + + E
Sbjct: 177 HALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEME 236
Query: 214 AVGYFVKMKDLG-FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
A+ F +M G P+E AC +G+ G+ +H I+ + +G +L
Sbjct: 237 ALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLS 296
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
DMYA+C + AR+ F R+E ++ +W++++ + G EAL LFS M++S + P+ +
Sbjct: 297 DMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGI 356
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
T G+LCAC + G R H G+ +++ + AR L A
Sbjct: 357 TVRGLLCACVGRDALYHG-RLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHE 415
Query: 393 MPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLEL----EP---RGSQNLVIVANK 445
+ Q + + ++L+A + H+ E +L L EP R S N V+ A+
Sbjct: 416 IKDQ-DVVTWNSILTACAQHNHP-------EEVLKLFSLLNKSEPSLDRISLNNVLSAS- 466
Query: 446 YAEVGMWEKVSNVRRFMKNVGL 467
AE+G +E V V + GL
Sbjct: 467 -AELGYFEMVKQVHAYAFKAGL 487
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 144/299 (48%), Gaps = 32/299 (10%)
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSG-------LDSDVYTNNNLVRFYGSCRRKRDAC 184
Y ++ AC+ + L +G +V ++ S L + N+L+ YG C A
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 185 KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELG 244
+VFD+M R+ VSW +I V+N G+A+G F M G D+ + + ACTELG
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 245 NLSLGKWVHLQLI--ERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
++ G+ VH + ERG+ L Q AL+ MY+K G V +LF R+++ ++ +W ++
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQ--NALVTMYSKNGLVDDGFMLFERIKDKDLISWGSI 224
Query: 303 ILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
I G AQ G+ EAL++F M S PN F AC G E G E +H
Sbjct: 225 IAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYG-------EQIH 277
Query: 362 GIKPMRIHYH---------TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSI 411
G+ I Y +++D+ AR +L A + P+ + ++++A S+
Sbjct: 278 GLS---IKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIE-APDLVSWNSIVNAYSV 332
>gi|297832654|ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 163/509 (32%), Positives = 261/509 (51%), Gaps = 38/509 (7%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+ FL+ S+ +IHA I V GL + ++ ++V C ++ YA + N V++
Sbjct: 14 IPFLQRVKSRNEWKKIHACIIVHGLSQSSFMVTKMVDLC--DKLGDMDYATRLF-NQVSN 70
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIK-PTEFTYPFVLKACAEISGLNEGMQ 150
+N++IR Y + + + ++ + R+ I+ P FT+PF+ K+CA + G Q
Sbjct: 71 PNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASLGSCYLGKQ 130
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT------- 203
V ++ K G V T N L+ Y DA KVFD+M ER V+SWN +++
Sbjct: 131 VHGHLYKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMSERDVISWNSLLSGYARLGQ 190
Query: 204 ---------VCVENL---WLG------------EAVGYFVKMKDLGFEPDETTMLVVLSA 239
+ ++ W EA+ +F +M+ G EPDE +++ VL +
Sbjct: 191 MKKAKGLFHLMIDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPS 250
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C LG+L LGKW+H+ RG + + ALI+MY+KCG + A LF + + +V +W
Sbjct: 251 CAHLGSLELGKWIHMYAERRGLLKQTGVCNALIEMYSKCGMLSQAIQLFEQTKGKDVISW 310
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
S MI G A HG A A E F M+ + + PN +TFLG+L AC+H G+ + G +YF M
Sbjct: 311 STMISGYAYHGNAHRAFETFIEMQRAKVKPNGITFLGLLSACSHVGLWQQGLKYFDMMRQ 370
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
+ I+P HY + D+LARAG L+ A MP +P+ + +LLS+ K
Sbjct: 371 DYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPVKPDSKIWGSLLSSCR---TKGNLD 427
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
V L+E+EP N V++AN YA++G WE VS +R+ ++ +KK G S +E+
Sbjct: 428 VALVAMDHLVEVEPDDMGNYVLLANIYADLGKWEDVSRLRKIIRKENMKKTPGCSLIEVN 487
Query: 480 GSIHRFYSGYDSQVELAGIYQILETLNLH 508
+ F +G +S+ I +L+ H
Sbjct: 488 NIVQEFVAGDNSKPFWTEISLVLQLFTSH 516
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 246/477 (51%), Gaps = 9/477 (1%)
Query: 33 SFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S L+ C S LY QIH + +G Q + + L+ + L A IL
Sbjct: 468 SILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDM--YAKYGQLALALRILRRLP 525
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
D V + W +I GY D EA+ +F +M+ RGI+ + + ACA I L +G
Sbjct: 526 EDDV-VSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQ 584
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ A +G +D+ NN L+ Y C R ++A F+ + +++ +SWN +++ ++
Sbjct: 585 QIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSG 644
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+ EA+ FV+M E + T +SA L N+ G+ +H +++ G ++
Sbjct: 645 YFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSN 704
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
+LI +YAK G++ A F+ M E NV +W+AMI G +QHG EAL LF MK I P
Sbjct: 705 SLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMP 764
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
N+VTF+GVL AC+H G+V++G YF M +H + P HY + D+L RAG L A +
Sbjct: 765 NHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEY 824
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
I MP + ++ R LLSA IH +G LLELEP S V+++N YA
Sbjct: 825 IKEMPIPADAMIWRTLLSACVIHK---NIEIGERAAHHLLELEPEDSATYVLISNIYAVS 881
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
W R+ MK+ G+KK G SW+E+ ++H FY+G IY+ + LN
Sbjct: 882 RQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLN 938
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 164/342 (47%), Gaps = 4/342 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+H + G ++ + LV S S+ L A I +N + +N+LI G
Sbjct: 282 QLHCLVIKWGFHSETYVCNGLVAL--YSRSRKLISAERIFST-MNSRDGVSYNSLISGLV 338
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
A+ +F M+R +KP T +L ACA + L++GMQ+ ++ K+G+ +D+
Sbjct: 339 QQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADII 398
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
+L+ Y C A K F ++V WNV++ + L ++ F +M+ G
Sbjct: 399 LEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEG 458
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
P++ T +L CT LG L LG+ +H +I+ G LN + + LIDMYAK G + A
Sbjct: 459 MIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALAL 518
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+ R+ E +V +W+AMI G QH EAL+LF M+ I + + F + AC
Sbjct: 519 RILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIR 578
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
+ G + H + G + + + AR G ++EAY
Sbjct: 579 ALRQG-QQIHAQSYAAGFGADLSINNALISLYARCGRIQEAY 619
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 206/454 (45%), Gaps = 27/454 (5%)
Query: 33 SFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S L C S L+ Q+H+ +G+ D I+ E S ++ A
Sbjct: 367 SLLSACASVGALHKGMQLHSHAIKAGMSAD--IILEGSLLDLYSKCADVETAHKFFLXTE 424
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+++ + WN ++ Y D ++ +F M+ G+ P +FTYP +L+ C + L G
Sbjct: 425 TENI-VLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGE 483
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ +V K+G +VY + L+ Y + A ++ + E VVSW +I V++
Sbjct: 484 QIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHD 543
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
EA+ F +M+ G + D +SAC + L G+ +H Q G + +
Sbjct: 544 MFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINN 603
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
ALI +YA+CG + A L F ++ + N +W++++ GLAQ GY EEAL++F M +
Sbjct: 604 ALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEV 663
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
N T+ + A ++ G + H M G R +++ + A++G + +A+
Sbjct: 664 NMFTYGSAISAAASLANIKQG-QQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWRE 722
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
+M + N I A+++ S H G G E R E++ G I+ N V
Sbjct: 723 FNDMS-ERNVISWNAMITGYSQH------GCGMEALRLFEEMKVCG-----IMPNHVTFV 770
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIH 483
G+ S ++GL K +G+ + E IH
Sbjct: 771 GVLSACS-------HIGLVK-EGLDYFESMFKIH 796
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 159/347 (45%), Gaps = 16/347 (4%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +I G + + EA+ +F DM I PT + VL A +I G Q+
Sbjct: 227 VTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCL 286
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V K G S+ Y N LV Y R+ A ++F M R VS+N +I+ V+ + A
Sbjct: 287 VIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRA 346
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F KM+ +PD T+ +LSAC +G L G +H I+ G + L +L+D+
Sbjct: 347 LELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDL 406
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KC V A F E N+ W+ M++ Q ++ E+F M+ + PN T+
Sbjct: 407 YSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTY 466
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKP-MRIHYH---TMADILARAGHLKEAYTFI 390
+L C G + Y E H H IK +++ + + D+ A+ G L A +
Sbjct: 467 PSILRTCTSLGAL-----YLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRIL 521
Query: 391 MNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
+P + + + A+++ HD + +E + E+E RG Q
Sbjct: 522 RRLP-EDDVVSWTAMIAGYVQHD------MFSEALQLFEEMEYRGIQ 561
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 166/375 (44%), Gaps = 18/375 (4%)
Query: 26 SKARQCLSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYAR 82
S + L L+ C + L++ +H +I SG + ++ LV + A
Sbjct: 56 SNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVD--NYFRHGDQHGAV 113
Query: 83 SILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKAC--A 140
+ N SV WN +I + + +F M GI P +T+ VLKAC
Sbjct: 114 KVFDENSNRSV-FSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGG 172
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
+I+ N QV + G DS N L+ Y A KVF+ +C + +V+W
Sbjct: 173 DIA-FNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVA 231
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
+I+ +N EA+ F M P + VLSA T++ LG+ +H +I+ G
Sbjct: 232 MISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWG 291
Query: 261 TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS 320
+ L+ +Y++ + A +FS M + +++++I GL Q G+++ ALELF+
Sbjct: 292 FHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFT 351
Query: 321 NMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR----IHYHTMADI 376
M+ + P+ +T +L AC G + G + H H IK I ++ D+
Sbjct: 352 KMQRDCLKPDCITVASLLSACASVGALHKGMQL-----HSHAIKAGMSADIILEGSLLDL 406
Query: 377 LARAGHLKEAYTFIM 391
++ ++ A+ F +
Sbjct: 407 YSKCADVETAHKFFL 421
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 114/233 (48%), Gaps = 3/233 (1%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M+ RG++ Y ++L+ C L E M++ ++KSG D + ++LV Y
Sbjct: 49 MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGD 108
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
+ A KVFD+ RSV SWN +I V V + F +M G P+ T VL A
Sbjct: 109 QHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKA 168
Query: 240 CTELGNLSLG--KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVW 297
C G+++ K VH + G + + LID+Y+K G + A+ +F+ + ++
Sbjct: 169 CVG-GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIV 227
Query: 298 TWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
TW AMI GL+Q+G EEA+ LF +M S I P VL A + E G
Sbjct: 228 TWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 157/435 (36%), Positives = 227/435 (52%), Gaps = 34/435 (7%)
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
L N +++ + W+ LI GY + EA+ +FI+M G++ E VL ACA +S
Sbjct: 260 LFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSI 319
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVF----------------- 187
+ G + V + G++S V N L+ Y DA K+F
Sbjct: 320 VKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISG 379
Query: 188 --------------DDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTM 233
D M E+ +VSW+ +I+ ++ E + F +M+ PDET +
Sbjct: 380 CMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETIL 439
Query: 234 LVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEE 293
+ V+SACT L L GKWVH + + G +N LGT L+DMY KCG V A +F+ MEE
Sbjct: 440 VSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEE 499
Query: 294 INVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRY 353
V +W+A+I+GLA +G E +L++FS MKN+ + PN +TF+GVL AC H G+V++G +
Sbjct: 500 KGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCH 559
Query: 354 FHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHD 413
F M HGI+P HY M D+L RAG L EA I +MP P+ ALL A H
Sbjct: 560 FASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHG 619
Query: 414 AKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGM 473
+G V R+L+EL+P V+++N +A G WE V VR MK G+ K G
Sbjct: 620 ---DTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGC 676
Query: 474 SWVELGGSIHRFYSG 488
S +E G +H F +G
Sbjct: 677 SLIEANGVVHEFLAG 691
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 146/313 (46%), Gaps = 40/313 (12%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW 97
C + K +I +Q+ ++G +D L++F T S L Y+ I + + +S W
Sbjct: 51 CHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIF-DRIENSNGFMW 109
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N ++R Y S+ +A+ ++ M + + P +TYP V++ACA G ++ +V K
Sbjct: 110 NTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLK 169
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
G DSDVY N L+ Y C RDA K+FD+ VSWN I+ GY
Sbjct: 170 VGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILA------------GY 217
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
K G++ K + Q+ +R V + ++I + K
Sbjct: 218 VKK-----------------------GDVEEAKLIFDQMPQRNIVAS----NSMIVLLGK 250
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
G V A LF+ M+E ++ +WSA+I G Q+G EEAL +F M + + + V + V
Sbjct: 251 MGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSV 310
Query: 338 LCACNHAGMVEDG 350
L AC H +V+ G
Sbjct: 311 LSACAHLSIVKTG 323
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 154/373 (41%), Gaps = 76/373 (20%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY-VNDSVPIPWNNLIRGY 104
+IH + G +D + L+ + N+ AR + V DSV WN+++ GY
Sbjct: 162 EIHDHVLKVGFDSDVYVQNTLINMYAVCG--NMRDARKLFDESPVLDSVS--WNSILAGY 217
Query: 105 AWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDV 164
EA +F M +R ++
Sbjct: 218 VKKGDVEEAKLIFDQMPQR---------------------------------------NI 238
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL 224
+N+++ G + +A K+F++M E+ +VSW+ +I+ +N EA+ F++M
Sbjct: 239 VASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNAN 298
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA-------- 276
G DE ++ VLSAC L + GK +H +I G L ALI MY+
Sbjct: 299 GMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDA 358
Query: 277 -----------------------KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
KCG+V AR LF M E ++ +WSA+I G AQH
Sbjct: 359 QKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFS 418
Query: 314 EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
E L LF M+ I P+ + V+ AC H ++ G ++ H +G+K I T+
Sbjct: 419 ETLALFHEMQLGQIRPDETILVSVISACTHLAALDQG-KWVHAYIRKNGLKVNVILGTTL 477
Query: 374 ADILARAGHLKEA 386
D+ + G ++ A
Sbjct: 478 LDMYMKCGCVENA 490
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 150 QVQANVTKSGLDSDVYTNNNLVRF-YGSCRRKRD-ACKVFDDMCERSVVSWNVIITVCVE 207
++ + + +G SD + + L++F S D + ++FD + + WN ++ ++
Sbjct: 59 RILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQ 118
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT----ELGNLSLGKWVHLQLIERGTVL 263
+ +A+ + M PD T +V+ AC E G GK +H +++ G
Sbjct: 119 SNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFG----GKEIHDHVLKVGFDS 174
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
+ + LI+MYA CG + AR LF ++ +W++++ G + G EEA +F M
Sbjct: 175 DVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMP 234
Query: 324 NSSI--SPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
+I S + + LG + G V + ++ F+EM+
Sbjct: 235 QRNIVASNSMIVLLGKM------GQVMEAWKLFNEMD 265
>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
Length = 749
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 162/463 (34%), Positives = 247/463 (53%), Gaps = 9/463 (1%)
Query: 52 QVSGLQNDAQILKELVRFCTLSS----SKNLTYARSILCNYVNDSVPIPWNNLIRGYAWS 107
Q+ GL ++ ++L C+LS KNL AR + + + WN+++ Y+
Sbjct: 258 QIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSAR-VAFYRIEAPDLVSWNSIVNAYSVE 316
Query: 108 DRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTN 167
EA+ +F +M+ G++P T +L AC L G + + + K GLD DV
Sbjct: 317 GLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVC 376
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
N+L+ Y C A VF ++ ++ VV+WN I+T C ++ E + F +
Sbjct: 377 NSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPS 436
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
D ++ VLSA ELG + K VH + G V + L LID YAKCG++ A L
Sbjct: 437 LDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRL 496
Query: 288 FSRM-EEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
F M +V++WS++I+G AQ GYA+EA +LFS M++ I PN+VTF+GVL AC+ G
Sbjct: 497 FEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGF 556
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALL 406
V +G Y+ ME +GI P R H + D+LARAG L EA FI MPF+P+ I+ + LL
Sbjct: 557 VNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLL 616
Query: 407 SASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVG 466
+AS +H+ +G +L ++P S V++ N YA G W + + +++ M+ G
Sbjct: 617 AASKMHNDME---MGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSG 673
Query: 467 LKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
+KK G SWV+L G + F S E IY +LE + + M
Sbjct: 674 VKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELIGMEM 716
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 162/349 (46%), Gaps = 19/349 (5%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HA S +D + LV T+ S L +L + D I W ++I G+A
Sbjct: 156 QVHAHALKSERGSDLIVQNALV---TMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFA 212
Query: 106 WSDRPREAVWVFIDMKRRGIK-PTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDV 164
EA+ VF +M G P EF + +AC + G Q+ K LD D+
Sbjct: 213 QQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDL 272
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV-CVENLWLGEAVGYFVKMKD 223
Y +L Y C+ A F + +VSWN I+ VE L L EA+ F +M+D
Sbjct: 273 YVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGL-LSEALVLFSEMRD 331
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G PD T+ +L AC L G+ +H L++ G + + +L+ MYA+C +
Sbjct: 332 SGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSS 391
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A +F +++ +V TW++++ AQH + EE L+LFS + S S + ++ VL A
Sbjct: 392 AMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAE 451
Query: 344 AGMVEDGYRYFHEMEHVH------GIKPMRIHYHTMADILARAGHLKEA 386
G YF ++ VH G+ R+ +T+ D A+ G L +A
Sbjct: 452 LG-------YFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDA 493
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 176/382 (46%), Gaps = 19/382 (4%)
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
P+ W ++I + + R +A+ +F M R G +F ++AC E+ + G QV A
Sbjct: 100 PVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHA 159
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+ KS SD+ N LV Y D +F+ + ++ ++SW II + + E
Sbjct: 160 HALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEME 219
Query: 214 AVGYFVKMKDLG-FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
A+ F +M G P+E AC +G+ G+ +H I+ + +G +L
Sbjct: 220 ALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLS 279
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
DMYA+C + AR+ F R+E ++ +W++++ + G EAL LFS M++S + P+ +
Sbjct: 280 DMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGI 339
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
T G+LCAC + G R H G+ +++ + AR L A
Sbjct: 340 TVRGLLCACVGRDALYHG-RLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHE 398
Query: 393 MPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLEL----EP---RGSQNLVIVANK 445
+ Q + + ++L+A + H+ E +L L EP R S N V+ A+
Sbjct: 399 IKDQ-DVVTWNSILTACAQHNHP-------EEVLKLFSLLNKSEPSLDRISLNNVLSAS- 449
Query: 446 YAEVGMWEKVSNVRRFMKNVGL 467
AE+G +E V V + GL
Sbjct: 450 -AELGYFEMVKQVHAYAFKAGL 470
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 136/299 (45%), Gaps = 49/299 (16%)
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSG-------LDSDVYTNNNLVRFYGSCRRKRDAC 184
Y ++ AC+ + L +G +V ++ S L + N+L+ YG
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYG--------- 97
Query: 185 KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELG 244
R+ VSW +I V+N G+A+G F M G D+ + + ACTELG
Sbjct: 98 --------RNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 149
Query: 245 NLSLGKWVHLQLI--ERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
++ G+ VH + ERG+ L Q AL+ MY+K G V +LF R+++ ++ +W ++
Sbjct: 150 DVGTGRQVHAHALKSERGSDLIVQ--NALVTMYSKNGLVDDGFMLFERIKDKDLISWGSI 207
Query: 303 ILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
I G AQ G+ EAL++F M S PN F AC G E G E +H
Sbjct: 208 IAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYG-------EQIH 260
Query: 362 GIKPMRIHYH---------TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSI 411
G+ I Y +++D+ AR +L A + P+ + ++++A S+
Sbjct: 261 GLS---IKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIE-APDLVSWNSIVNAYSV 315
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 153/422 (36%), Positives = 226/422 (53%), Gaps = 5/422 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W LI G + R A++ F +M+R I+P +FT+P KA + G QV A
Sbjct: 74 VTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHAL 133
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K+G SDV+ + Y +A K+FD+M ER++ +WN ++ V +A
Sbjct: 134 AVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDA 193
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F++ + G EP + + VLSAC L L +GK VH ++ V N +G+AL+DM
Sbjct: 194 LTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDM 253
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS--ISPNYV 332
Y KCG++ A F M E N+ TW+AMI G A G A+ A+ LF M S ++PNYV
Sbjct: 254 YGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYV 313
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
TF+ VL AC+ AG V G F M +GI+P HY + D+L RAG +++AY FI
Sbjct: 314 TFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKK 373
Query: 393 MPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMW 452
MP +P V ALL AS + + +G L EL+P S N V+++N +A G W
Sbjct: 374 MPIRPTVSVWGALLGASKMFG---KSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRW 430
Query: 453 EKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVL 512
E+ + VR+ MK+VG+KK G SW+ G ++H F + S + I +L L M+
Sbjct: 431 EEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAA 490
Query: 513 NF 514
+
Sbjct: 491 GY 492
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 4/249 (1%)
Query: 148 GMQVQANVTKSGLDSDV--YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
G A + K+ LD+ + + N+LV Y R A + RSVV+W +I
Sbjct: 25 GRAAHAQIIKT-LDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGS 83
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
V+N A+ +F M+ +P++ T A L + +GK VH ++ G + +
Sbjct: 84 VQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDV 143
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
+G + DMY+K G AR +F M E N+ TW+A + G ++AL F +
Sbjct: 144 FVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKE 203
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
I P VL AC ++E G + H + + + D+ + G +++
Sbjct: 204 GIEPTDFMVSSVLSACAGLSVLEVG-KSVHTLAVKACVVGNIFVGSALVDMYGKCGSIED 262
Query: 386 AYTFIMNMP 394
A MP
Sbjct: 263 AERAFDEMP 271
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 154/478 (32%), Positives = 243/478 (50%), Gaps = 41/478 (8%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+IHA+I +G +D + L+ S + AR + + + + WN +I Y
Sbjct: 228 KIHAEIVANGFDSDLVVATALINMYGKCGSSH--EAREVF-DKMKKRDMVSWNVMIGCYV 284
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ EA+ ++ + G K T+ T+ +L AC+ + L +G V +++ + GLDS+V
Sbjct: 285 QNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVA 344
Query: 166 TNNNLVRFYGSC----------------------------------RRKRDACKVFDDMC 191
LV Y C + R A KVFD +
Sbjct: 345 VATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLG 404
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL-GFEPDETTMLVVLSACTELGNLSLGK 250
R + WN +IT V+N A+ F +M G +PD T + VL AC LG LS K
Sbjct: 405 SRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVK 464
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
+H Q+ E N + LI+MYA+CG++ A LF+ +E V +W+AM+ +Q+G
Sbjct: 465 ALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYG 524
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
EAL+LF M + P+ VT+ +L C H G +E G+RYF +M +HG+ P H+
Sbjct: 525 RYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHF 584
Query: 371 HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLE 430
M D+L R+G L +A + +MPF+P+P+ L+A IH K + +G R+ E
Sbjct: 585 AAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIH-GKLE--LGEAAAERVYE 641
Query: 431 LEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
L+P + + ++N YA GMWEKV++VR+ M+ GLKK+ G+S++E+ G +H F SG
Sbjct: 642 LDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSG 699
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 186/387 (48%), Gaps = 24/387 (6%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELV----RFCTLSSSKNLTYARSILCN 87
+S L C S +IH ++ SGL + + LV RF ++ +K + +
Sbjct: 114 VSVLGACSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQS------ 167
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+ WN +I ++ S A+ +F +MK +KP TY V+ + L E
Sbjct: 168 -LQTRDETSWNAVILAHSQSGDWSGALRIFKEMKC-DMKPNSTTYINVISGFSTPEVLPE 225
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G ++ A + +G DSD+ L+ YG C +A +VFD M +R +VSWNV+I V+
Sbjct: 226 GRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQ 285
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
N EA+ + K+ GF+ + T + +L AC+ + L+ G+ VH ++ERG +
Sbjct: 286 NGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAV 345
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY---AEEALELFSNMKN 324
TAL++MYAKCG++ AR +F+ M+ + WS +I A +GY A +A ++F + +
Sbjct: 346 ATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGS 405
Query: 325 -SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+I N + V C A M + F EM G+KP + + + + A G L
Sbjct: 406 RDTICWNAMITTYVQNGCAVAAM-----KIFREMTGAAGLKPDAVTFIAVLEACASLGRL 460
Query: 384 KEA---YTFIMNMPFQPNPIVLRALLS 407
E + I + N +V L++
Sbjct: 461 SEVKALHAQISESELESNVVVTNTLIN 487
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 189/417 (45%), Gaps = 23/417 (5%)
Query: 32 LSFLKLCCSKKHLYQI------HAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
++FL + CS + H +I+ S + D + L+ +L ARS+
Sbjct: 8 VTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISM--YGKCDSLVDARSVF 65
Query: 86 --CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS 143
++ +V + WN +I YA + EA+ ++ M +G+ T+ VL AC S
Sbjct: 66 ESMDWRQRNV-VSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC---S 121
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
L +G ++ V SGLDS N LV Y DA ++F + R SWN +I
Sbjct: 122 SLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVIL 181
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
++ A+ F +MK +P+ TT + V+S + L G+ +H +++ G
Sbjct: 182 AHSQSGDWSGALRIFKEMK-CDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDS 240
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
+ + TALI+MY KCG+ AR +F +M++ ++ +W+ MI Q+G EALEL+ +
Sbjct: 241 DLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLD 300
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
TF+ +L AC+ + G R H G+ + ++ A+ G L
Sbjct: 301 MEGFKRTKATFVSILGACSSVKALAQG-RLVHSHILERGLDSEVAVATALVNMYAKCGSL 359
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLV 440
+EA N + R ++ S++ A +G G + R+ + GS++ +
Sbjct: 360 EEARKVF-------NAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTI 409
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 169/406 (41%), Gaps = 54/406 (13%)
Query: 126 KPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACK 185
+P T+ VL +C+ + EG + + S + D N L+ YG C DA
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 186 VFDDMC--ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
VF+ M +R+VVSWN +I +N EA+ + +M G D T + VL AC+ L
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
G+ +H ++ G L AL+ MYA+ G+VG A+ +F ++ + +W+A+I
Sbjct: 124 AQ---GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI 180
Query: 304 LGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN-----------HAGMVEDGYR 352
L +Q G AL +F MK + PN T++ V+ + HA +V +G+
Sbjct: 181 LAHSQSGDWSGALRIFKEMK-CDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD 239
Query: 353 -----------------YFHEMEHVHGIKPMR--IHYHTMADILARAGHLKEAYTFIMNM 393
HE V R + ++ M + G EA +
Sbjct: 240 SDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKL 299
Query: 394 P---FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA----NKY 446
F+ ++L A S A Q G V +LE RG + V VA N Y
Sbjct: 300 DMEGFKRTKATFVSILGACSSVKALAQ---GRLVHSHILE---RGLDSEVAVATALVNMY 353
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQ 492
A+ G E+ V MKN ++W L G+ G D++
Sbjct: 354 AKCGSLEEARKVFNAMKN-----RDAVAWSTLIGAYASNGYGKDAR 394
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 176/531 (33%), Positives = 263/531 (49%), Gaps = 49/531 (9%)
Query: 16 KPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQI--QVSGLQNDAQILKELVRFCTLS 73
KP N LL KA C++ L ++ ++I V L D+ I L
Sbjct: 104 KPDNYTYPLLFKA----------CARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLV 153
Query: 74 SSKNLTYARSILCNY-VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
S +L AR + V D V WN++I GY EA+ + +MK GIKP E T
Sbjct: 154 SCGDLDGARKMFDKSCVRDLVS--WNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTM 211
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
V+ +CA++ L+ G + + ++GL V N L+ Y C A K+FD M
Sbjct: 212 IGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTN 271
Query: 193 RSVVSWNVIIT----------------------VCVENLWLG---------EAVGYFVKM 221
+++VSW ++ V N +G EA+ F +M
Sbjct: 272 KTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEM 331
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
+ + PDE TM+ LSAC++LG L +G W+H + + LN LGTALIDMYAKCG +
Sbjct: 332 QAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKI 391
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
A +F + N TW+A+I GLA HG A A+ FS M ++S+ P+ VTFLG+L AC
Sbjct: 392 TKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSAC 451
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIV 401
H G+VE+G +YF +M + P HY M D+L RAG L+EA I +MP + + +V
Sbjct: 452 CHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVV 511
Query: 402 LRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRF 461
AL A IH +G +LL+++P S V++AN Y E MW++ R+
Sbjct: 512 WGALFFACRIHGNVL---MGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARKL 568
Query: 462 MKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVL 512
M+ G++K G S +E+ G ++ F S + IY+ L L ++++
Sbjct: 569 MRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQLTRQLELV 619
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/413 (32%), Positives = 209/413 (50%), Gaps = 35/413 (8%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LS L+ C S L QI +Q+ ++GL D L+ FC +S ++L Y +IL N N
Sbjct: 10 LSLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNP 69
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFID-MKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
+ WN IRG+ S+ PREAV ++ ++ G KP +TYP + KACA +S + G +
Sbjct: 70 NT-FSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSE 128
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+ +V G DSD++ +N ++ SC A K+FD C R +VSWN +I V W
Sbjct: 129 ILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGW 188
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
EA+ ++ +MK G +PDE TM+ V+S+C +L +L LG+ H + E G L L A
Sbjct: 189 AYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANA 248
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY------------------- 311
L+DMY KCG + AR LF M + +W+ M++G AQ G
Sbjct: 249 LMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPW 308
Query: 312 ------------AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+EAL LF+ M+ +I+P+ VT + L AC+ G ++ G H +E
Sbjct: 309 NAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEK 368
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
H + + D+ A+ G + +A +P + N + A++S ++H
Sbjct: 369 -HELSLNVALGTALIDMYAKCGKITKAIQVFQELPGR-NSLTWTAIISGLALH 419
>gi|449436789|ref|XP_004136175.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 464
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 160/458 (34%), Positives = 238/458 (51%), Gaps = 15/458 (3%)
Query: 26 SKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
+++ + L+ S H+ QI AQ+ + L + I + C +L S
Sbjct: 10 AESTRILTIFTTSLSPLHIPQIQAQLILQNLHSHPLIAHHFINTC-----HHLHLLGSAF 64
Query: 86 CNYVNDSVPIPW----NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAE 141
+ + +P P N+LIR ++ S P ++++ M R I P +T+PFVLK+ A+
Sbjct: 65 LFFTH--IPKPHVFICNSLIRAFSHSKIPHTPLFLYTHMNRNSISPNNYTFPFVLKSLAD 122
Query: 142 ISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVI 201
L G V +V KSG SD+Y N L+ Y SC + KVFD+M VVSW ++
Sbjct: 123 FKDLVGGQSVHTHVVKSGHASDLYVQNTLMDVYASCGKMGLCKKVFDEMLHTDVVSWTIL 182
Query: 202 ITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGT 261
I + L +A+ F +M+ G +P+ T++ L+AC G + +G W+H + +
Sbjct: 183 IMGYRVSFMLDDALIVFEQMQYAGVDPNRVTIVNALAACASFGAIEMGVWIHEFVKTKRW 242
Query: 262 VLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSN 321
++ LGTALIDMY KCG + A +F M+E NV+TW+ I GLA EEA+ F
Sbjct: 243 EVDVVLGTALIDMYGKCGRIKEALAVFQAMKEKNVYTWNVFINGLASAKCGEEAIAWFKR 302
Query: 322 MKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH-GIKPMRIHYHTMADILARA 380
M + + VT + VL AC+H+G+V G + F + H G P HY M DILAR
Sbjct: 303 MDEEGVEADDVTLVAVLSACSHSGLVNSGRQIFWSLIHGRFGFSPGIKHYSCMVDILARN 362
Query: 381 GHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLV 440
G ++EA I +MPF+ + +LL+ S H + V RRL+E+EP V
Sbjct: 363 GCIEEACVMIKDMPFEATRSMWGSLLTGSRAHGSLE---VSEIAARRLVEMEPENGGYYV 419
Query: 441 IVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVEL 478
+++N YAE+G W +V VR MK GLKK G S VEL
Sbjct: 420 VLSNIYAEMGKWSEVEKVREIMKERGLKKDLGSSSVEL 457
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 154/478 (32%), Positives = 242/478 (50%), Gaps = 41/478 (8%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+IHA+I +G D + L+ S + AR + + + + WN +I Y
Sbjct: 228 KIHAEIVANGFDTDLVVATALINMYGKCGSSH--EAREVF-DKMKKRDMVSWNVMIGCYV 284
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ EA+ ++ + G K T+ T+ +L AC+ + L +G V +++ + GLDS+V
Sbjct: 285 LNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVA 344
Query: 166 TNNNLVRFYGSC----------------------------------RRKRDACKVFDDMC 191
LV Y C + R A KVFD +
Sbjct: 345 VATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLG 404
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL-GFEPDETTMLVVLSACTELGNLSLGK 250
R +SWN +IT V+N A+ F +M G +PD T + VL AC LG LS K
Sbjct: 405 SRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVK 464
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
+H Q+ E N + LI+MYA+CG++ A LF+ +E V +W+AM+ +Q+G
Sbjct: 465 ALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYG 524
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
EAL+LF M + P+ VT+ +L C H G +E G+RYF +M +H + P H+
Sbjct: 525 RYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHF 584
Query: 371 HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLE 430
M D+L R+G L +A + +MPF+P+P+ L+A IH K + +G R+ E
Sbjct: 585 AAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIH-GKLE--LGEAAAERVYE 641
Query: 431 LEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
L+P + + ++N YA GMWEKV++VR+ M+ GLKK+ G+S++E+ G +H F SG
Sbjct: 642 LDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSG 699
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 185/387 (47%), Gaps = 24/387 (6%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELV----RFCTLSSSKNLTYARSILCN 87
+S L C S +IH ++ SGL + + LV RF ++ +K + +
Sbjct: 114 VSVLGACSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQS------ 167
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+ WN +I ++ S A+ +F +MK +KP TY V+ + L E
Sbjct: 168 -LQTRDETSWNAVILAHSQSGDWSGALRIFKEMKC-DVKPNSTTYINVISGFSTPEVLPE 225
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G ++ A + +G D+D+ L+ YG C +A +VFD M +R +VSWNV+I V
Sbjct: 226 GRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVL 285
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
N EA+ + K+ GF+ + T + +L AC+ + L+ G+ VH ++ERG +
Sbjct: 286 NGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAV 345
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY---AEEALELFSNMKN 324
TAL++MYAKCG++ AR +F+ M+ + WS +I A +GY A +A ++F + +
Sbjct: 346 ATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGS 405
Query: 325 -SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+IS N + V C A M + F EM G+KP + + + + A G L
Sbjct: 406 RDTISWNAMITTYVQNGCAVAAM-----KIFREMTGAAGLKPDAVTFIAVLEACASLGRL 460
Query: 384 KEAYTF---IMNMPFQPNPIVLRALLS 407
E I + N +V L++
Sbjct: 461 SEVKALHAQISESELESNVVVTNTLIN 487
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 188/417 (45%), Gaps = 23/417 (5%)
Query: 32 LSFLKLCCSKKHLYQI------HAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
++FL + CS + H +I+ S + D + L+ +L ARS+
Sbjct: 8 VTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISM--YGKCDSLVDARSVF 65
Query: 86 --CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS 143
++ +V + WN +I YA + EA+ ++ M +G+ T+ VL AC S
Sbjct: 66 ESMDWRQRNV-VSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC---S 121
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
L +G ++ V SGLDS N LV Y DA ++F + R SWN +I
Sbjct: 122 SLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVIL 181
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
++ A+ F +MK +P+ TT + V+S + L G+ +H +++ G
Sbjct: 182 AHSQSGDWSGALRIFKEMK-CDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDT 240
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
+ + TALI+MY KCG+ AR +F +M++ ++ +W+ MI +G EALEL+ +
Sbjct: 241 DLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLD 300
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
TF+ +L AC+ + G R H G+ + ++ A+ G L
Sbjct: 301 MEGFKRTKATFVSILGACSSVKALAQG-RLVHSHILERGLDSEVAVATALVNMYAKCGSL 359
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLV 440
+EA N + R ++ S++ A +G G + R+ + GS++ +
Sbjct: 360 EEARKVF-------NAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTI 409
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 168/406 (41%), Gaps = 54/406 (13%)
Query: 126 KPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACK 185
+P T+ VL +C+ + EG + + S + D N L+ YG C DA
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 186 VFDDMC--ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
VF+ M +R+VVSWN +I +N EA+ + +M G D T + VL AC+ L
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
G+ +H ++ G L AL+ MYA+ G+VG A+ +F ++ + +W+A+I
Sbjct: 124 AQ---GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI 180
Query: 304 LGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN-----------HAGMVEDGYR 352
L +Q G AL +F MK + PN T++ V+ + HA +V +G+
Sbjct: 181 LAHSQSGDWSGALRIFKEMK-CDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD 239
Query: 353 Y-----------------FHEMEHVHGIKPMR--IHYHTMADILARAGHLKEAYTFIMNM 393
HE V R + ++ M G EA +
Sbjct: 240 TDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKL 299
Query: 394 P---FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA----NKY 446
F+ ++L A S A Q G V +LE RG + V VA N Y
Sbjct: 300 DMEGFKRTKATFVSILGACSSVKALAQ---GRLVHSHILE---RGLDSEVAVATALVNMY 353
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQ 492
A+ G E+ V MKN ++W L G+ G D++
Sbjct: 354 AKCGSLEEARKVFNAMKN-----RDAVAWSTLIGAYASNGYGKDAR 394
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 170/504 (33%), Positives = 258/504 (51%), Gaps = 21/504 (4%)
Query: 19 NCNSDLLSKARQCLS-FLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSS 74
NC S L R S L C + L Q IHA IQ S ++D +L ++
Sbjct: 97 NCGS--LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCG 154
Query: 75 SKNLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEF 130
S L A+ + D +P + W LI GY+ S + EA+ +F M G +P EF
Sbjct: 155 S--LEEAQDLF-----DKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEF 207
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
T +LKA + G Q+ A K G D +V+ ++L+ Y R+A +F+ +
Sbjct: 208 TLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSL 267
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
++VVSWN +I + F++M GFEP T V +AC G+L GK
Sbjct: 268 AAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGK 327
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
WVH +I+ G +G LIDMYAK G++ A+ +F R+ + ++ +W+++I G AQHG
Sbjct: 328 WVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHG 387
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
EAL+LF M + + PN +TFL VL AC+H+G++++G YF E+ H I+ H+
Sbjct: 388 LGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYF-ELMKKHKIEAQVAHH 446
Query: 371 HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLE 430
T+ D+L RAG L EA FI MP +P V ALL + +H K D +G ++ E
Sbjct: 447 VTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMH--KNMD-LGVYAAEQIFE 503
Query: 431 LEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYD 490
L+P S V+++N YA G + VR+ MK G+KK SWVE+ +H F + D
Sbjct: 504 LDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDD 563
Query: 491 SQVELAGIYQILETLNLHMKVLNF 514
S I ++ E ++ +K + +
Sbjct: 564 SHPMREEIQRMWEKISGKIKEIGY 587
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 163/474 (34%), Positives = 242/474 (51%), Gaps = 18/474 (3%)
Query: 43 HLYQIHAQIQVSGLQNDAQILKELVRFCTL----SSSKNLTYARSILCNYVNDSVPI--- 95
H+Y ++ + L D L++ V F L S L AR + D +P+
Sbjct: 174 HMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLF-----DEIPVKDV 228
Query: 96 -PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
WN +I GY S R EA+ F +M+ + P + T VL AC G + +
Sbjct: 229 VSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSW 288
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V +G S++ N L+ Y C A ++FD + E+ V+SWN +I EA
Sbjct: 289 VRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEA 348
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER-GTVLNCQLGTALID 273
+ F M +P++ T L +L AC LG L LGKWVH + + N L T+LID
Sbjct: 349 LALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLID 408
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI-SPNYV 332
MYAKCG + A +F M N+ +W+AM+ G A HG+AE AL LFS M N + P+ +
Sbjct: 409 MYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDI 468
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
TF+GVL AC AG+V+ G++YF M +GI P HY M D+LARA +EA + N
Sbjct: 469 TFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKN 528
Query: 393 MPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMW 452
M +P+ + +LLSA H + G V RL +LEP + V+++N YA G W
Sbjct: 529 MEMEPDGAIWGSLLSACKAHG---RVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRW 585
Query: 453 EKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
+ V+ +R + + G+KK+ G + +E+ G +H F G E IY++L ++
Sbjct: 586 DDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVD 639
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/380 (32%), Positives = 194/380 (51%), Gaps = 38/380 (10%)
Query: 5 PVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILK 64
P P+ H P S+ +L + L+ L+ C + QIH+ I +GL N +
Sbjct: 8 PSPSILHFLPA--SDPPYKILEQ-HPYLNLLEKCKNINTFKQIHSLIIKTGLNNTVFVQS 64
Query: 65 ELVRFCTLSSSKNLTYARSIL---CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMK 121
+L+ FC +S S +L+YA S+ + +V I WN+LIRGY+ S P ++ +F M
Sbjct: 65 KLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFI-WNSLIRGYSLSSSPLSSLHLFSRML 123
Query: 122 RRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRK- 180
G++P T+PF+ K+C + +EG Q+ A+ K L + + + +++ Y S
Sbjct: 124 YYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMD 183
Query: 181 ------------------------------RDACKVFDDMCERSVVSWNVIITVCVENLW 210
DA ++FD++ + VVSWN +I+ V++
Sbjct: 184 FARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGR 243
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
EA+ F +M++ P+++TM+VVLSAC + LGKW+ + + G N QL A
Sbjct: 244 FEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNA 303
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
LIDMY KCG AR LF +EE +V +W+ MI G + EEAL LF M S++ PN
Sbjct: 304 LIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPN 363
Query: 331 YVTFLGVLCACNHAGMVEDG 350
VTFLG+L AC G ++ G
Sbjct: 364 DVTFLGILHACACLGALDLG 383
>gi|225452668|ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g28640-like [Vitis vinifera]
Length = 511
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 166/487 (34%), Positives = 253/487 (51%), Gaps = 10/487 (2%)
Query: 29 RQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
++C+S + C + + IHA V+GL + + +L+ FC LS+S +L+YA I
Sbjct: 5 KRCISLAQSCSNMRQFKAIHALFIVNGLHLNNYAISKLISFCALSNSGSLSYASLIFSQI 64
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVF-IDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
N ++ +N LIR Y+ S P+ A+ F + + + P + T+PF++ AC +
Sbjct: 65 QNPNL-FAYNTLIRAYSRSSTPQLALHYFQLMLDDENVGPDQHTFPFIISACTNSLWMLL 123
Query: 148 GMQVQANVTKSGL-DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G Q+ V K+G+ SD + LVRFY C DA K+FD++ VV WNV++ V
Sbjct: 124 GKQIHNWVLKNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNLDVVQWNVLLNGYV 183
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNC 265
EA+ F M G EPDE + L C +LG L GKW+H + +R + +
Sbjct: 184 RRGLAPEALNAFRNMLVSGVEPDEFCLTTALKGCAQLGALQQGKWIHEYVTKRKWLEADV 243
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK-N 324
+GTAL+DMYAKCG + + +F M + NV++WSAMI G A HG+ +A++ M+
Sbjct: 244 FIGTALVDMYAKCGCIDRSVEVFEGMTKRNVFSWSAMIGGFALHGHVRKAMQCLERMQVE 303
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ P+ V LGV+ AC HAG+ E+G ME +GI P HY M D+L RAG L
Sbjct: 304 DGLRPDGVVLLGVIMACAHAGLQEEGQFLLENMEARYGILPKHEHYSCMVDLLCRAGQLD 363
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQN---LVI 441
EA I MP +P V ALLS H+ D R L+ G++ V
Sbjct: 364 EALKLIRRMPMKPRAAVWGALLSGCRTHNNV--DLAELAARELLMVGNGDGTEEDGAYVQ 421
Query: 442 VANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQI 501
++N Y E +RR + + +K G S +E+ G +++F SG S LA I+++
Sbjct: 422 LSNIYLAAQKCEDACRIRRMIGDKRIKTKPGCSLIEVEGEVNQFVSGDISHPCLAQIHEM 481
Query: 502 LETLNLH 508
L+ ++L
Sbjct: 482 LDLVSLQ 488
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 159/473 (33%), Positives = 235/473 (49%), Gaps = 39/473 (8%)
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
++ ARS+ V+ + WN +I GY S EA +F M + EFT+ VL
Sbjct: 243 DVGAARSVF-EEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVL 301
Query: 137 KACAEISGLNEGMQVQANVTKSGL----DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
ACA + G V + + ++ + NN LV FY C A ++FD+M
Sbjct: 302 SACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTL 361
Query: 193 RSVVSWNVIITVCVENLWLGEAV-------------------GY------------FVKM 221
+ VVSWN I++ VE+ L +AV GY F KM
Sbjct: 362 KDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKM 421
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
+ +P + T ++AC ELG L GK +H +++ G + G ALI MYA+CGAV
Sbjct: 422 RSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAV 481
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
A L+F M I+ +W+AMI L QHG+ EALELF M I P+ ++FL VL AC
Sbjct: 482 KEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTAC 541
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIV 401
NH+G+V++G+RYF M+ GI P HY + D+L RAG + EA I MPF+P P +
Sbjct: 542 NHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSI 601
Query: 402 LRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRF 461
A+LS +G +L ++ P+ ++++N Y+ G W + VR+
Sbjct: 602 WEAILSGCRTSGDME---LGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKL 658
Query: 462 MKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
M++ G+KK G SW+E G +H F G E +Y+ LE + M+ L +
Sbjct: 659 MRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMRKLGY 711
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 160/387 (41%), Gaps = 74/387 (19%)
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEISGLN--EGMQVQAN 154
N +I YA + AV VF + G ++P ++++ +L A + ++ Q+ +
Sbjct: 125 NAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCS 184
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRK---RDACKVFDDM--------------------- 190
V KSG + N LV Y C RDA KV D+M
Sbjct: 185 VLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDV 244
Query: 191 -CERSV---------VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
RSV V WN +I+ V + EA F +M DE T VLSAC
Sbjct: 245 GAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSAC 304
Query: 241 TELGNLSLGKWVHLQLI--ERGTVLNCQL--GTALIDMYAKCGAVGCARLLFSRM----- 291
+G + GK VH Q+I + V L AL+ Y+KCG + AR +F M
Sbjct: 305 ANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDV 364
Query: 292 -----------------------EEI---NVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
EE+ N +W M+ G G+AE+AL+LF+ M++
Sbjct: 365 VSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSE 424
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
++ P T+ G + AC G ++ G + + + G + + + + AR G +KE
Sbjct: 425 NVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQL-GFEGSNSAGNALITMYARCGAVKE 483
Query: 386 AYTFIMNMPFQPNPIVLRALLSASSIH 412
A+ + MP + + A++SA H
Sbjct: 484 AHLMFLVMP-NIDSVSWNAMISALGQH 509
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 84/224 (37%), Gaps = 39/224 (17%)
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDM--CERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
+ +LV Y + R A FD + R V N +I+ AV F +
Sbjct: 90 SATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLA 149
Query: 224 LG-FEPDETTMLVVLSACTELGNLSLG--KWVHLQLIERGTVLNCQLGTALIDMYAKC-- 278
G PD+ + +LSA L N+S+ +H +++ G + AL+ +Y KC
Sbjct: 150 SGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCES 209
Query: 279 --------------------------------GAVGCARLLFSRMEEINVWTWSAMILGL 306
G VG AR +F ++ W+AMI G
Sbjct: 210 PEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGY 269
Query: 307 AQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
G A EA ELF M + + TF VL AC + G+ G
Sbjct: 270 VHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHG 313
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 246/477 (51%), Gaps = 9/477 (1%)
Query: 33 SFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S L+ C S LY QIH + +G Q + + L+ + L A IL
Sbjct: 468 SILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDM--YAKYGQLALALRILRRLP 525
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
D V + W +I GY D EA+ +F +M+ RGI+ + + ACA I L +G
Sbjct: 526 EDDV-VSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQ 584
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ A +G +D+ NN L+ Y C R ++A F+ + +++ +SWN +++ ++
Sbjct: 585 QIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSG 644
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+ EA+ FV+M E + T +SA L N+ G+ +H +++ G ++
Sbjct: 645 YFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSN 704
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
+LI +YAK G++ A F+ M E NV +W+AMI G +QHG EAL LF MK I P
Sbjct: 705 SLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMP 764
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
N+VTF+GVL AC+H G+V++G YF M +H + P HY + D+L RAG L A +
Sbjct: 765 NHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEY 824
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
I MP + ++ R LLSA IH +G LLELEP S V+++N YA
Sbjct: 825 IKEMPIPADAMIWRTLLSACVIHK---NIEIGERAAHHLLELEPEDSATYVLISNIYAVS 881
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
W R+ MK+ G+KK G SW+E+ ++H FY+G IY+ + LN
Sbjct: 882 RQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLN 938
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 164/342 (47%), Gaps = 4/342 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+H + G ++ + LV S S+ L A I +N + +N+LI G
Sbjct: 282 QLHCLVIKWGFHSETYVCNGLVAL--YSRSRKLISAERIFST-MNSRDGVSYNSLISGLV 338
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
A+ +F M+R +KP T +L ACA + L++GMQ+ ++ K+G+ +D+
Sbjct: 339 QQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADII 398
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
+L+ Y C A K F ++V WNV++ + L ++ F +M+ G
Sbjct: 399 LEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEG 458
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
P++ T +L CT LG L LG+ +H +I+ G LN + + LIDMYAK G + A
Sbjct: 459 MIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALAL 518
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+ R+ E +V +W+AMI G QH EAL+LF M+ I + + F + AC
Sbjct: 519 RILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIR 578
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
+ G + H + G + + + AR G ++EAY
Sbjct: 579 ALRQG-QQIHAQSYAAGFGADLSINNALISLYARCGRIQEAY 619
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 206/454 (45%), Gaps = 27/454 (5%)
Query: 33 SFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S L C S L+ Q+H+ +G+ D I+ E S ++ A
Sbjct: 367 SLLSACASVGALHKGMQLHSHAIKAGMSAD--IILEGSLLDLYSKCADVETAHKFFLTTE 424
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+++ + WN ++ Y D ++ +F M+ G+ P +FTYP +L+ C + L G
Sbjct: 425 TENI-VLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGE 483
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ +V K+G +VY + L+ Y + A ++ + E VVSW +I V++
Sbjct: 484 QIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHD 543
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
EA+ F +M+ G + D +SAC + L G+ +H Q G + +
Sbjct: 544 MFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINN 603
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
ALI +YA+CG + A L F ++ + N +W++++ GLAQ GY EEAL++F M +
Sbjct: 604 ALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEV 663
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
N T+ + A ++ G + H M G R +++ + A++G + +A+
Sbjct: 664 NMFTYGSAISAAASLANIKQG-QQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWRE 722
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
+M + N I A+++ S H G G E R E++ G I+ N V
Sbjct: 723 FNDMS-ERNVISWNAMITGYSQH------GCGMEALRLFEEMKVCG-----IMPNHVTFV 770
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIH 483
G+ S ++GL K +G+ + E IH
Sbjct: 771 GVLSACS-------HIGLVK-EGLDYFESMFKIH 796
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 159/347 (45%), Gaps = 16/347 (4%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +I G + + EA+ +F DM I PT + VL A +I G Q+
Sbjct: 227 VTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCL 286
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V K G S+ Y N LV Y R+ A ++F M R VS+N +I+ V+ + A
Sbjct: 287 VIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRA 346
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F KM+ +PD T+ +LSAC +G L G +H I+ G + L +L+D+
Sbjct: 347 LELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDL 406
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KC V A F E N+ W+ M++ Q ++ E+F M+ + PN T+
Sbjct: 407 YSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTY 466
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKP-MRIHYH---TMADILARAGHLKEAYTFI 390
+L C G + Y E H H IK +++ + + D+ A+ G L A +
Sbjct: 467 PSILRTCTSLGAL-----YLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRIL 521
Query: 391 MNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
+P + + + A+++ HD + +E + E+E RG Q
Sbjct: 522 RRLP-EDDVVSWTAMIAGYVQHD------MFSEALQLFEEMEYRGIQ 561
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 166/376 (44%), Gaps = 18/376 (4%)
Query: 26 SKARQCLSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYAR 82
S + L L+ C + L++ +H +I SG + ++ LV + A
Sbjct: 56 SNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVD--NYFRHGDQHGAV 113
Query: 83 SILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKAC--A 140
+ N SV WN +I + + +F M GI P +T+ VLKAC
Sbjct: 114 KVFDENSNRSV-FSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGG 172
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
+I+ N QV + G DS N L+ Y A KVF+ +C + +V+W
Sbjct: 173 DIA-FNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVA 231
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
+I+ +N EA+ F M P + VLSA T++ LG+ +H +I+ G
Sbjct: 232 MISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWG 291
Query: 261 TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS 320
+ L+ +Y++ + A +FS M + +++++I GL Q G+++ ALELF+
Sbjct: 292 FHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFT 351
Query: 321 NMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR----IHYHTMADI 376
M+ + P+ +T +L AC G + G + H H IK I ++ D+
Sbjct: 352 KMQRDCLKPDCITVASLLSACASVGALHKGMQL-----HSHAIKAGMSADIILEGSLLDL 406
Query: 377 LARAGHLKEAYTFIMN 392
++ ++ A+ F +
Sbjct: 407 YSKCADVETAHKFFLT 422
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 114/233 (48%), Gaps = 3/233 (1%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M+ RG++ Y ++L+ C L E M++ ++KSG D + ++LV Y
Sbjct: 49 MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGD 108
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
+ A KVFD+ RSV SWN +I V V + F +M G P+ T VL A
Sbjct: 109 QHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKA 168
Query: 240 CTELGNLSLG--KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVW 297
C G+++ K VH + G + + LID+Y+K G + A+ +F+ + ++
Sbjct: 169 CVG-GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIV 227
Query: 298 TWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
TW AMI GL+Q+G EEA+ LF +M S I P VL A + E G
Sbjct: 228 TWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280
>gi|449455116|ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 722
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 157/470 (33%), Positives = 252/470 (53%), Gaps = 16/470 (3%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPWNNLIR 102
+H VS L D +L S ++L AR + D +P + WN +I
Sbjct: 248 VHCIAIVSKLSGD--LLVNTAVLSLYSKLRSLVDARKLF-----DKMPEKDRVVWNIMIA 300
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
YA +P E + +F M R GI+ FT V+ + A++ ++ G Q A++ ++G DS
Sbjct: 301 AYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
V +N+L+ Y C+ ACK+F+ M ++SV+SW+ +I V+N A+ F KMK
Sbjct: 361 QVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMK 420
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
G + D M+ +L A +G L K++H ++ G L TAL+ YAKCG++
Sbjct: 421 SDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIE 480
Query: 283 CARLLF--SRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
A+ LF ++++ ++ W++MI A HG + +L++ MK S+ P+ VTFLG+L A
Sbjct: 481 MAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPI 400
C ++G+VE G +F EM +G +P + HY M ++L RAG + EA + NMP +P+
Sbjct: 541 CVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDAR 600
Query: 401 VLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRR 460
V LLSA +H E +L+ +EPR + N ++++N YA G W+ V+ +R
Sbjct: 601 VWGPLLSACKMHPGSKLAEFAAE---KLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRS 657
Query: 461 FMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
F++N GLKK+ G SW+E+ G + F + IY IL L L +K
Sbjct: 658 FLRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIK 707
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 115/240 (47%), Gaps = 1/240 (0%)
Query: 116 VFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYG 175
VF M + P FT+ +L+ A ++ + V S L D+ N ++ Y
Sbjct: 213 VFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYS 272
Query: 176 SCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLV 235
R DA K+FD M E+ V WN++I E + F M G D T L
Sbjct: 273 KLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALP 332
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
V+S+ +L + GK H ++ G+ + +LIDMY +C + A +F+ M + +
Sbjct: 333 VISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKS 392
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
V +WSAMI G ++G + AL LFS MK+ I ++V + +L A H G +E+ +Y H
Sbjct: 393 VISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALEN-VKYLH 451
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 142/316 (44%), Gaps = 9/316 (2%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW 97
C S +HL QIHA+ + G + + +L+ ++ L ++ + C+ ++ ++ + +
Sbjct: 37 CNSIQHLQQIHARFILHGFHQNPTLSSKLID--CYANLGLLNHSLQVFCSVIDPNLTL-F 93
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N ++R + V+ M + + P E TYPFVL++C+ S + G + + K
Sbjct: 94 NAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVK 153
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSV--VSWNVIITVCVENLWLGEAV 215
G D L Y C +A ++FD +RSV + W +T GE +
Sbjct: 154 LGFDLFDVVATALAEMYEECIEFENAHQLFD---KRSVKDLGWPSSLTTEGPQNDNGEGI 210
Query: 216 -GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
F +M PD T +L L ++ L K VH I + + TA++ +
Sbjct: 211 FRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSL 270
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+K ++ AR LF +M E + W+ MI A+ G E LELF +M S I + T
Sbjct: 271 YSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTA 330
Query: 335 LGVLCACNHAGMVEDG 350
L V+ + V+ G
Sbjct: 331 LPVISSIAQLKCVDWG 346
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 3/208 (1%)
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
T + C I L Q+ A G + ++ L+ Y + + +VF +
Sbjct: 29 TLSLLFSRCNSIQHLQ---QIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSV 85
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
+ ++ +N I+ + + +M PDE T VL +C+ N+ G+
Sbjct: 86 IDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGR 145
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
+H L++ G L + TAL +MY +C A LF + ++ S++ Q+
Sbjct: 146 TIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQND 205
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVL 338
E +F M + P+ TF +L
Sbjct: 206 NGEGIFRVFGRMIAEQLVPDSFTFFNLL 233
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 156/471 (33%), Positives = 247/471 (52%), Gaps = 6/471 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGY 104
Q+H+++ GL D + LV + ++ ++ +R + +V + W +I Y
Sbjct: 72 QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV-MSWTAIITAY 130
Query: 105 AWSDR-PREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD 163
A S +EA+ +F M I+P F++ VLKAC +S G QV + K G+ S
Sbjct: 131 AQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASV 190
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
N+L+ Y R DA K FD + E+++VS+N I+ +NL EA F ++ D
Sbjct: 191 NCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIAD 250
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G T +LS +G + G+ +H +L++ G N + ALI MY++CG +
Sbjct: 251 TGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEA 310
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A +F+ ME+ NV +W++MI G A+HG+A ALE+F M + PN +T++ VL AC+H
Sbjct: 311 AFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSH 370
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
GM+ +G ++F+ M HGI P HY M D+L R+G L EA FI +MP + +V R
Sbjct: 371 VGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWR 430
Query: 404 ALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMK 463
LL A +H +G +LE EP ++++N +A G W+ V +R+ MK
Sbjct: 431 TLLGACRVHG---NTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMK 487
Query: 464 NVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
L K G SW+E+ +HRF+ G S + IYQ L+ L +K + +
Sbjct: 488 ERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGY 538
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 132/230 (57%), Gaps = 6/230 (2%)
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
A KVFD M ER++V+W ++IT + +A+ F+ M+ G+ PD T VLSACTE
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC---GAVGCARLLFSRMEEINVWTW 299
LG L+LGK +H ++I G L+ +G +L+DMYAKC G+V +R +F +M E NV +W
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 300 SAMILGLAQHGYAE-EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
+A+I AQ G + EA+ELF M + I PN+ +F VL AC + G + +
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
+ GI + +++ + AR+G +++A ++ F+ N + A++
Sbjct: 184 KL-GIASVNCVGNSLISMYARSGRMEDARK-AFDILFEKNLVSYNAIVDG 231
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 167/369 (45%), Gaps = 53/369 (14%)
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D +P + W +I +A R+A+ +F+DM+ G P FTY VL AC E+
Sbjct: 7 VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 66
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRK---RDACKVFDDMCERSVVSWNVI 201
L G Q+ + V + GL DV +LV Y C D+ KVF+ M E +V+SW I
Sbjct: 67 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 126
Query: 202 ITVCVENLWLG-EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
IT ++ EA+ F KM P+ + VL AC L + G+ V+ ++ G
Sbjct: 127 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 186
Query: 261 TV-LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELF 319
+NC +G +LI MYA+ G + AR F + E N+ +++A++ G A++ +EEA LF
Sbjct: 187 IASVNC-VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 245
Query: 320 SNMKNSSISPNYVTFLGVL----------------------------CACN-------HA 344
+ + ++ I + TF +L C CN
Sbjct: 246 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 305
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM---PFQPNPIV 401
G +E ++ F+EME + I + +M A+ G A M +PN I
Sbjct: 306 GNIEAAFQVFNEMEDRNVIS-----WTSMITGFAKHGFATRALEMFHKMLETGTKPNEIT 360
Query: 402 LRALLSASS 410
A+LSA S
Sbjct: 361 YVAVLSACS 369
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 166/512 (32%), Positives = 257/512 (50%), Gaps = 42/512 (8%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW 97
C + H Q+HA I + L + ++ L+RF T + +L + V+ P +
Sbjct: 21 CTTLNHAKQLHAHIYRNNLHQSSYVITNLLRFITTLPHIPVHTYPHLLFSQVHSPNPFLY 80
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
+ LIR YA + ++ ++ M + P FT+ + S G Q+ +
Sbjct: 81 SALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSLLKNPS---LGSQLHLHAFL 137
Query: 158 SGLDSDVYTNNNLVRFYG-----SCRRK-------RD-------------------ACKV 186
G +D+Y N ++ Y C RK RD AC++
Sbjct: 138 FGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGDMDSACEL 197
Query: 187 FDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNL 246
F + + +V+W ++T +N +A+ +F KM++ G DE T++ +SAC +LG
Sbjct: 198 FVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVS 257
Query: 247 SLGKWVHLQLIER---GTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
W+ ++ E G+ N +G+ALIDMY+KCG V A +F M+E+NV+++S+MI
Sbjct: 258 GYADWIR-EIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMI 316
Query: 304 LGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
+G A HG A A++LF M + I PN+VTF+G+ AC+HAGMVE G + F M+ +G+
Sbjct: 317 VGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGV 376
Query: 364 KPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNE 423
P HY MAD+L RAGHL++A + MP +PN V ALL AS IH V
Sbjct: 377 SPTADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIHG---NPDVAEI 433
Query: 424 VRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVEL-GGSI 482
R L ELEP N ++++ YA W+ VS VR+ M+ L+K G SWVE G I
Sbjct: 434 ASRSLFELEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCSWVEAKNGII 493
Query: 483 HRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
H F++G E+ I + L+ L +K +
Sbjct: 494 HEFFAGDVKHPEINEIKKALDDLLQRLKCTGY 525
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 224/392 (57%), Gaps = 3/392 (0%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN LI G A + PR+A+ ++I M G+ P FT +L A A + L G +V V
Sbjct: 305 WNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVL 364
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
+ GL+ D + +L+ Y C A +FD M E+S VSWN +I+ +N +A+
Sbjct: 365 RHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALI 424
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F K+ GF+P + ++ VL AC++ L LGK H ++ + + + + IDMYA
Sbjct: 425 LFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYA 484
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
K G + +R +F ++ ++ +W+A+I HG EE++ELF M+ P+ TF+G
Sbjct: 485 KSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIG 544
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
+L C+HAG+VE+G +YF+EM++ HGI+P HY + D+L RAG L +A + MP Q
Sbjct: 545 ILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQ 604
Query: 397 PNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVS 456
P+ V +LLS + +G V +LLELEP+ +N V ++N YA G W+ V
Sbjct: 605 PDSRVWSSLLSFCRNFG---ELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVR 661
Query: 457 NVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
VR+ +K++GL+K G SW+ELGG +H F +G
Sbjct: 662 RVRQMIKDIGLQKDAGCSWIELGGKVHSFVAG 693
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 174/372 (46%), Gaps = 14/372 (3%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+IH GL D ++ LV S LT A+ +L + N + WN +I G
Sbjct: 155 RIHGLAVKLGLSEDVRVNNSLVDM--YSKCGYLTEAQ-MLFDKNNRKNAVSWNTMIGGLC 211
Query: 106 WSDRPREAVWVFIDMK-RRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDV 164
EA +F +M+ + I+ E T +L AC EIS L ++ + G D
Sbjct: 212 TKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDE 271
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL 224
N V Y C A +VF M ++V SWN +I C +N +A+ +++M
Sbjct: 272 LVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYS 331
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCA 284
G PD T+ +L A L +L GK VH ++ G ++ +G +L+ +Y CG A
Sbjct: 332 GLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSA 391
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA 344
RLLF MEE + +W+AMI G +Q+G E+AL LF + + P+ + + VL AC+
Sbjct: 392 RLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQ 451
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHYHTMA----DILARAGHLKEAYTFIMNMPFQPNPI 400
+ G + H + +K + + +A D+ A++G +KE+ + + +
Sbjct: 452 SALRLG-----KETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLK-NKDLA 505
Query: 401 VLRALLSASSIH 412
A+++A +H
Sbjct: 506 SWNAIIAAYGVH 517
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 116/232 (50%), Gaps = 8/232 (3%)
Query: 118 IDMKRRGIKPTEF-----TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVR 172
IDM + I TEF T+P V+KAC G + V K GL DV+ N L+
Sbjct: 15 IDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIA 74
Query: 173 FYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM--KDLGFEPDE 230
YG A KVF M R++VSWN II+ EN + + V+M + G PD
Sbjct: 75 MYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDI 134
Query: 231 TTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSR 290
T++ VL C ++ +G +H ++ G + ++ +L+DMY+KCG + A++LF +
Sbjct: 135 ATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDK 194
Query: 291 MEEINVWTWSAMILGLAQHGYAEEALELFSNMK-NSSISPNYVTFLGVLCAC 341
N +W+ MI GL GY EA LF M+ I N VT L +L AC
Sbjct: 195 NNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPAC 246
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 124/269 (46%), Gaps = 11/269 (4%)
Query: 40 SKKHLYQIHAQIQVSGLQNDAQI---LKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP 96
S ++ ++H + GL+ D+ I L L C SSS L + + + + +
Sbjct: 352 SLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLF------DGMEEKSSVS 405
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN +I GY+ + P +A+ +F + G +P++ VL AC++ S L G +
Sbjct: 406 WNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYAL 465
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
K+ L DV+ + + Y +++ VFD + + + SWN II + E++
Sbjct: 466 KALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIE 525
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLG-KWVHLQLIERGTVLNCQLGTALIDMY 275
F +M+ +G PD T + +L+ C+ G + G K+ + G + ++DM
Sbjct: 526 LFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDML 585
Query: 276 AKCGAVGCA-RLLFSRMEEINVWTWSAMI 303
+ G + A RL+ E+ + WS+++
Sbjct: 586 GRAGRLDDALRLVHEMPEQPDSRVWSSLL 614
>gi|449498539|ref|XP_004160564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 464
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 160/458 (34%), Positives = 238/458 (51%), Gaps = 15/458 (3%)
Query: 26 SKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
+++ + LS S H+ QI AQ+ + L + I + C +L S
Sbjct: 10 AESTRILSIFTTSLSPLHIPQIQAQLILQNLHSHPLIAHHFINTC-----HHLHLLGSAF 64
Query: 86 CNYVNDSVPIPW----NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAE 141
+ + +P P N+LIR ++ S P ++++ M R I P +T+PFVLK+ A+
Sbjct: 65 LFFTH--IPKPHVFICNSLIRAFSHSKIPHTPLFLYTHMNRNSISPNNYTFPFVLKSLAD 122
Query: 142 ISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVI 201
L G V +V KSG SD+Y N L+ Y SC + KVFD+M VVSW ++
Sbjct: 123 FKDLVGGQSVHTHVVKSGHASDLYVQNTLMDVYASCGKMGLCKKVFDEMLHTDVVSWTIL 182
Query: 202 ITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGT 261
I + L +A+ F +M+ G +P+ T++ L+AC G + +G W+H + +
Sbjct: 183 IMGYRVSFMLDDALIVFEQMQYAGVDPNRVTIVNALAACASFGAIEMGVWIHEFVKTKRW 242
Query: 262 VLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSN 321
++ LGTALIDMY KCG + A +F M+E NV+TW+ I GLA EEA+ F
Sbjct: 243 EVDVVLGTALIDMYGKCGRIKEALAVFQAMKEKNVYTWNVFINGLASAKCGEEAIAWFKR 302
Query: 322 MKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH-GIKPMRIHYHTMADILARA 380
M + + VT + VL AC+H+G+V G + F + H G P HY M DILAR
Sbjct: 303 MDEEGVEADDVTLVAVLSACSHSGLVNSGRQIFWSLIHGRFGFSPGIKHYSCMVDILARN 362
Query: 381 GHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLV 440
G ++EA I +MPF+ + +LL+ S H + V R+L+E+EP V
Sbjct: 363 GCIEEACVMINDMPFEATRSMWGSLLTGSRAHGSLE---VSEIAARKLVEMEPENGGYYV 419
Query: 441 IVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVEL 478
+++N YAE+G W +V VR MK GLKK G S VEL
Sbjct: 420 VLSNIYAEMGKWSEVEKVREIMKERGLKKDLGSSSVEL 457
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/447 (33%), Positives = 244/447 (54%), Gaps = 39/447 (8%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN++I G+ P +A+ +F M+ +K + T VL ACA+I L G QV +
Sbjct: 198 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY 257
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS-------------------- 194
+ ++ ++ ++ N ++ Y C DA ++FD M E+
Sbjct: 258 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 317
Query: 195 -----------VVSWNVIITVCVENLWLGEAVGYFVKMK-DLGFEPDETTMLVVLSACTE 242
+V+WN +I+ +N EA+ F +++ + ++ T++ LSAC +
Sbjct: 318 REVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQ 377
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
+G L LG+W+H + + G +N + +ALI MY+KCG + +R +F+ +E+ +V+ WSAM
Sbjct: 378 VGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAM 437
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
I GLA HG EA+++F M+ +++ PN VTF V CAC+H G+V++ FH+ME +G
Sbjct: 438 IGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYG 497
Query: 363 IKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGN 422
I P HY + D+L R+G+L++A FI MP P+ V ALL A IH +
Sbjct: 498 IVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIH---ANLNLAE 554
Query: 423 EVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSI 482
RLLELEPR V+++N YA++G WE VS +R+ M+ GLKK G S +E+ G I
Sbjct: 555 MACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMI 614
Query: 483 HRFYSGYD----SQVELAGIYQILETL 505
H F SG + S+ +++++E L
Sbjct: 615 HEFLSGDNAHPMSEKVYGKLHEVMEKL 641
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/451 (30%), Positives = 215/451 (47%), Gaps = 57/451 (12%)
Query: 15 PKPSNCNSDLLSKAR-QCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLS 73
P SN N + R + +S ++ C S + L Q H + +G +D +L LS
Sbjct: 16 PNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALS 75
Query: 74 SSKNLTYARSILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPT 128
S +L YAR + D +P P WN LIR YA P ++W F+DM P
Sbjct: 76 SFASLEYARKVF-----DEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 129 EFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD 188
++T+PF++KA AE+S L+ G + KS + SDV+ N+L+ Y SC ACKVF
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFT 190
Query: 189 DMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSL 248
+ E+ VVSWN +I V+ +A+ F KM+ + TM+ VLSAC ++ NL
Sbjct: 191 TIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEF 250
Query: 249 GKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA- 307
G+ V + E +N L A++DMY KCG++ A+ LF MEE + TW+ M+ G A
Sbjct: 251 GRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAI 310
Query: 308 ------------------------------QHGYAEEALELFSNMK-NSSISPNYVTFLG 336
Q+G EAL +F ++ ++ N +T +
Sbjct: 311 SEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVS 370
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL---ARAGHLKEAYTFIMNM 393
L AC G +E G R+ H HGI R+++H + ++ ++ G L+++ + N
Sbjct: 371 TLSACAQVGALELG-RWIHSYIKKHGI---RMNFHVTSALIHMYSKCGDLEKSRE-VFNS 425
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEV 424
+ + V A++ ++H G GNE
Sbjct: 426 VEKRDVFVWSAMIGGLAMH------GCGNEA 450
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 166/488 (34%), Positives = 251/488 (51%), Gaps = 15/488 (3%)
Query: 35 LKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSI---LCNY 88
LK C L+ +IH+ G+ D + L+ SS + AR++ L
Sbjct: 134 LKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALI--SAFSSCGAVEAARAVFDMLPAL 191
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEISGLNE 147
V D V WN++I GY S R A+ VF ++ G + P E T L C + L+
Sbjct: 192 VRDVVS--WNSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDL 249
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G ++ T SG DV+ ++L+ Y C + DA KVFD + R+ V W +I +
Sbjct: 250 GKKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQ 309
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
+ EA+ F +M+ GF D T+ VLSAC G L+ G+W+HL ++
Sbjct: 310 SDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNA 369
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN-SS 326
ALI MY+KCG + A +F + + ++++WSA+I GLA +G +++AL LFS M+ S
Sbjct: 370 RNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISD 429
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
I PN +TFLGVLCACNH G V+ G YF+ M ++ + P HY M D+L RA L EA
Sbjct: 430 IRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEA 489
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKY 446
FI +P QP+ ++ R+LL A H + +++ ELEPR V+++N Y
Sbjct: 490 EKFIRTLPIQPDVVIWRSLLFACRNHG---NIELAEFAAKQIEELEPRRCGARVLLSNVY 546
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
A W V VR+ M +KK G S+VE+ G +H + S E+ IY+ + ++N
Sbjct: 547 ASASRWGDVKRVRKDMATQRIKKQPGCSFVEIDGLVHELFVADRSHPEMGAIYETMISIN 606
Query: 507 LHMKVLNF 514
++ F
Sbjct: 607 KALQSKGF 614
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 173/327 (52%), Gaps = 6/327 (1%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LS L+ + QI + SG+ D + +L+ + +LS + ++R++
Sbjct: 32 LSLLQNLSHPRSFNQILSHAIASGVFRDPVVSSKLLYY-SLSHDHDFAFSRTLFFQIHKP 90
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
+V WN + R Y+ S P E + ++ M R G P +++PFVLKACA +S L++G ++
Sbjct: 91 NV-FSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREI 149
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE--RSVVSWNVIITVCVENL 209
++ K G+ DV+ N L+ + SC A VFD + R VVSWN +I+ +++
Sbjct: 150 HSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSH 209
Query: 210 WLGEAVGYFVK-MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
A+ F + + D PDE T++ LS C LG L LGK +H G VL+ +G
Sbjct: 210 RYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVG 269
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
++LIDMY+KCG + AR +F R+ N W++MI G AQ +EA+ELF M+ +
Sbjct: 270 SSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFA 329
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFH 355
+ T VL AC H G + G R+ H
Sbjct: 330 ADAATIACVLSACGHWGALAQG-RWIH 355
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 138/419 (32%), Positives = 229/419 (54%), Gaps = 5/419 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I WN L+ G+ ++ + +F M G P +T+ +L++C+ +S ++ G QV A
Sbjct: 498 ISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQ 557
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ K+ LD + + LV Y R DA +F+ + +R + +W VI+ ++ +A
Sbjct: 558 IVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKA 617
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
V F++M+ G +P+E T+ LS C+ + L G+ +H I+ G + + +AL+DM
Sbjct: 618 VKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDM 677
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG V A ++F + + +W+ +I G +QHG +AL+ F M + P+ VTF
Sbjct: 678 YAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTF 737
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+GVL AC+H G++E+G ++F+ + ++GI P HY M DIL RAG E +FI M
Sbjct: 738 IGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMK 797
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
N ++ +L A +H G +L ELEP N ++++N +A GMW+
Sbjct: 798 LTSNVLIWETVLGACKMHG---NIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDD 854
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLN 513
V+NVR M G+KK G SWVE+ G +H F S S ++ I+ L+ +LH K+++
Sbjct: 855 VTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIH--LKLQDLHQKLMS 911
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/326 (32%), Positives = 155/326 (47%), Gaps = 6/326 (1%)
Query: 23 DLLSKARQCLSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLT 79
D + RQ L+ C SK L + IH Q+ SG+ D+ + LV S N
Sbjct: 123 DSKGRLRQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSAN-- 180
Query: 80 YARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKAC 139
YA + V + W LI G+ AV +F +M+R G++ EFTY LKAC
Sbjct: 181 YACKVFGEIPERDV-VSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKAC 239
Query: 140 AEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWN 199
+ L G QV A K G SD++ + LV Y C A +VF M +++ VSWN
Sbjct: 240 SMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWN 299
Query: 200 VIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER 259
++ + + + F +M + T+ VL C GNL G+ VH I
Sbjct: 300 ALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRI 359
Query: 260 GTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELF 319
G L+ + L+DMY+KCG G A +F R+E+ +V +WSA+I L Q G + EA E+F
Sbjct: 360 GCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVF 419
Query: 320 SNMKNSSISPNYVTFLGVLCACNHAG 345
M++S + PN T ++ A G
Sbjct: 420 KRMRHSGVIPNQFTLASLVSAATDLG 445
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 147/298 (49%), Gaps = 1/298 (0%)
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
+ D + W+ +I + REA VF M+ G+ P +FT ++ A ++ L G
Sbjct: 391 IEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYG 450
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
+ A V K G + D N LV Y +D C+VF+ R ++SWN +++ +N
Sbjct: 451 ESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDN 510
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+ F +M GF P+ T + +L +C+ L ++ LGK VH Q+++ N +G
Sbjct: 511 ETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVG 570
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
TAL+DMYAK + A +F+R+ + +++ W+ ++ G AQ G E+A++ F M+ +
Sbjct: 571 TALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVK 630
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
PN T L C+ ++ G R H M G + D+ A+ G +++A
Sbjct: 631 PNEFTLASSLSGCSRIATLDSG-RQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDA 687
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 157/318 (49%), Gaps = 8/318 (2%)
Query: 111 REAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNL 170
++ +W +D +G Y +L+ CA LNEG + V KSG++ D + N+L
Sbjct: 113 KKRIWRGLDFDSKGRLRQ---YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSL 169
Query: 171 VRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDE 230
V Y C ACKVF ++ ER VVSW +IT V + AV F +M+ G E +E
Sbjct: 170 VNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANE 229
Query: 231 TTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSR 290
T L AC+ +L GK VH + I+ G + +G+AL+D+YAKCG + A +F
Sbjct: 230 FTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLC 289
Query: 291 MEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
M + N +W+A++ G AQ G AE+ L LF M S I+ + T VL C ++G + G
Sbjct: 290 MPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAG 349
Query: 351 YRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASS 410
+ H + G + + D+ ++ G +A + + P+ + A+++
Sbjct: 350 -QIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIE-DPDVVSWSAIITCL- 406
Query: 411 IHDAKYQDGVGNEVRRRL 428
D K Q EV +R+
Sbjct: 407 --DQKGQSREAAEVFKRM 422
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 179/404 (44%), Gaps = 11/404 (2%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
L +C + Q+HA+ G +D + LV L R LC +
Sbjct: 236 LKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLA-ERVFLCMPKQN 294
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
+V WN L+ G+A + + +F M I ++FT VLK CA L G V
Sbjct: 295 AVS--WNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIV 352
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
+ + G + D + + LV Y C DA KVF + + VVSW+ IIT +
Sbjct: 353 HSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQS 412
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
EA F +M+ G P++ T+ ++SA T+LG+L G+ +H + + G + + AL
Sbjct: 413 REAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNAL 472
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
+ MY K G+V +F ++ +W+A++ G + + L +F+ M +PN
Sbjct: 473 VTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNM 532
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
TF+ +L +C+ V+ G + H + + + D+ A+ L++A T
Sbjct: 533 YTFISILRSCSSLSDVDLG-KQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIF- 590
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
N ++ R L + + I QDG G + + ++++ G
Sbjct: 591 ------NRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREG 628
>gi|242062828|ref|XP_002452703.1| hypothetical protein SORBIDRAFT_04g031000 [Sorghum bicolor]
gi|241932534|gb|EES05679.1| hypothetical protein SORBIDRAFT_04g031000 [Sorghum bicolor]
Length = 622
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/479 (33%), Positives = 248/479 (51%), Gaps = 13/479 (2%)
Query: 40 SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSS-SKNLTYARSILCNYVNDSVPIPWN 98
S + + HA+ G+ + + L+ C LS + A SI + V +N
Sbjct: 54 SLDEVRKAHARHIKLGVDRCPRHARPLLAACALSGWPGGMELAASIFESLVEPEA-FDYN 112
Query: 99 NLIRGYAWSDR----PREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
L+RG+ R P A+ +++DM G+ P +T+PFVLKACA+++ L +G Q+QA+
Sbjct: 113 TLMRGHVGGGRGDREPAAALRLYVDMLEAGVGPDSYTFPFVLKACAQLASLQQGRQLQAH 172
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD--DMCERSVVSWNVIITVCVENLWLG 212
+ K GL D + N+L+ FYG C A FD + ER+ SW+ ++ + G
Sbjct: 173 IEKLGLQHDEHVQNSLISFYGKCGEPAMARLAFDRVEDEERTTASWSALLAAYTKAGLWG 232
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
E + F M G+ PDE++M+ +SAC LG +G+ +H L+ LN + T+L+
Sbjct: 233 ECLESFGAMVLDGWRPDESSMVSAISACAHLGAFDVGRSIHCALLRNTARLNTIMQTSLV 292
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
DMYAKCG++ A +F M++ N W +SAM+ GLA HG +AL++F M +P+
Sbjct: 293 DMYAKCGSIEKAAAVFDAMDDKNAWAYSAMLSGLALHGDGRKALQVFDAMVREGHAPDAA 352
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
++GVL AC+ AG++EDG R F M H P HY M D++ARAG L +A I +
Sbjct: 353 AYVGVLNACSRAGLLEDGLRCFDRMRLEHKFAPNAQHYGCMVDLMARAGRLDDARALIGS 412
Query: 393 MPFQPNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGM 451
MP P R+LL+A IH D + E+R L + + VIVA+ +A
Sbjct: 413 MPTGPTDTAWRSLLNACRIHGDLDLAESALEELR----SLGAANAGDYVIVADMHARAKN 468
Query: 452 WEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
W + R + GL + G S VE+ G +HRF S S IY++L + ++
Sbjct: 469 WAAAAAFRTEAVDWGLAQSPGFSAVEVRGELHRFVSQDMSHPRTRDIYEMLHQMEWQLR 527
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 156/471 (33%), Positives = 247/471 (52%), Gaps = 6/471 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGY 104
Q+H+++ GL D + LV + ++ ++ +R + +V + W +I Y
Sbjct: 77 QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV-MSWTAIITAY 135
Query: 105 AWSDR-PREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD 163
A S +EA+ +F M I+P F++ VLKAC +S G QV + K G+ S
Sbjct: 136 AQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASV 195
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
N+L+ Y R DA K FD + E+++VS+N I+ +NL EA F ++ D
Sbjct: 196 NCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIAD 255
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G T +LS +G + G+ +H +L++ G N + ALI MY++CG +
Sbjct: 256 TGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEA 315
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A +F+ ME+ NV +W++MI G A+HG+A ALE+F M + PN +T++ VL AC+H
Sbjct: 316 AFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSH 375
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
GM+ +G ++F+ M HGI P HY M D+L R+G L EA FI +MP + +V R
Sbjct: 376 VGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWR 435
Query: 404 ALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMK 463
LL A +H +G +LE EP ++++N +A G W+ V +R+ MK
Sbjct: 436 TLLGACRVHG---NTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMK 492
Query: 464 NVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
L K G SW+E+ +HRF+ G S + IYQ L+ L +K + +
Sbjct: 493 ERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGY 543
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 132/230 (57%), Gaps = 6/230 (2%)
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
A KVFD M ER++V+W ++IT + +A+ F+ M+ G+ PD T VLSACTE
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC---GAVGCARLLFSRMEEINVWTW 299
LG L+LGK +H ++I G L+ +G +L+DMYAKC G+V +R +F +M E NV +W
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 300 SAMILGLAQHGYAE-EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
+A+I AQ G + EA+ELF M + I PN+ +F VL AC + G + +
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
+ GI + +++ + AR+G +++A ++ F+ N + A++
Sbjct: 189 KL-GIASVNCVGNSLISMYARSGRMEDARK-AFDILFEKNLVSYNAIVDG 236
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 167/369 (45%), Gaps = 53/369 (14%)
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D +P + W +I +A R+A+ +F+DM+ G P FTY VL AC E+
Sbjct: 12 VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 71
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRK---RDACKVFDDMCERSVVSWNVI 201
L G Q+ + V + GL DV +LV Y C D+ KVF+ M E +V+SW I
Sbjct: 72 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 131
Query: 202 ITVCVENLWLG-EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
IT ++ EA+ F KM P+ + VL AC L + G+ V+ ++ G
Sbjct: 132 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 191
Query: 261 TV-LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELF 319
+NC +G +LI MYA+ G + AR F + E N+ +++A++ G A++ +EEA LF
Sbjct: 192 IASVNC-VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 250
Query: 320 SNMKNSSISPNYVTFLGVL----------------------------CACN-------HA 344
+ + ++ I + TF +L C CN
Sbjct: 251 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 310
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM---PFQPNPIV 401
G +E ++ F+EME + I + +M A+ G A M +PN I
Sbjct: 311 GNIEAAFQVFNEMEDRNVIS-----WTSMITGFAKHGFATRALEMFHKMLETGTKPNEIT 365
Query: 402 LRALLSASS 410
A+LSA S
Sbjct: 366 YVAVLSACS 374
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 158/487 (32%), Positives = 254/487 (52%), Gaps = 17/487 (3%)
Query: 35 LKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LKLC +K L Q HAQI + GL+ D +L + S ++ +AR + D
Sbjct: 71 LKLCAKRKLLLQGKACHAQILLMGLKTD--LLTSNILINMYSKCGSVDFARQVF-----D 123
Query: 92 SVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+P + WN +I + EA+ + + M+R G +EFT VL ACA L+E
Sbjct: 124 EMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSE 183
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
+ A K+ +D +V+ L+ Y C +DA VF+ M +RSVV+W+ + V+
Sbjct: 184 CQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQ 243
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
N +A+ F K + G + D+ M V+ AC L + GK ++ L + G N +
Sbjct: 244 NEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFV 303
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
++LIDMYAKCG + + +F +E+ NV W+AMI GL++H + E + LF M+ +
Sbjct: 304 ASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGL 363
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
SPN VTF+ VL AC H G+V G +YF M H + P HY M D L+RAG + EAY
Sbjct: 364 SPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAY 423
Query: 388 TFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYA 447
I +PF + + +LL++ H + ++L ++EP S N ++++N YA
Sbjct: 424 DLISKLPFNASASMWGSLLASCRTHG---NLELAEVAAKKLFDIEPHNSGNYLLLSNMYA 480
Query: 448 EVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNL 507
G W++V+ +R+ +K +KK +G SW+E+ +H F G + ++ IY L +
Sbjct: 481 ANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMD 540
Query: 508 HMKVLNF 514
++ L +
Sbjct: 541 ELQKLGY 547
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 139/279 (49%), Gaps = 4/279 (1%)
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
+LK CA+ L +G A + GL +D+ T+N L+ Y C A +VFD+M RS
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHL 254
+VSWN +I +N EA+ ++M+ G E T+ VL AC LS + +H
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189
Query: 255 QLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEE 314
I+ LN + TAL+D+YAKCG + A +F M + +V TWS+M G Q+ E+
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249
Query: 315 ALELFSNMKNSSISPNYVTFLGVLCAC-NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
AL LF + + + V+CAC A M+E + + + G ++
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEG--KQMNALLSKSGFCSNIFVASSL 307
Query: 374 ADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
D+ A+ G ++E+Y ++ + N ++ A++S S H
Sbjct: 308 IDMYAKCGGIEESYKVFRDVE-KRNVVLWNAMISGLSRH 345
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 164/466 (35%), Positives = 253/466 (54%), Gaps = 7/466 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+IH ++ SG + D+ + LV L A + N +V + WN++I GY
Sbjct: 228 EIHKELVNSGFRMDSFVSAALVDM--YGKCGQLEMAIEVFEQMPNKTV-VAWNSMINGYG 284
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ + +F M G+KPT T L AC++ + L EG V + ++ + D++
Sbjct: 285 FKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIF 344
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N++L+ Y C + A +F M + + VSWNV+I+ V L +A+ F +M
Sbjct: 345 LNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSF 404
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
EPD T VL+AC++L L G+ +H ++ER N + AL+DMYAKCGAV A
Sbjct: 405 VEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAF 464
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F + E ++ +W++MI HG EALELF+ M S++ P+ VTFL +L AC+HAG
Sbjct: 465 GVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAG 524
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP-FQPNPIVLRA 404
+V+DG +F++M +V+GI P HY + +L RAG L EAY + + P + +L
Sbjct: 525 LVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLST 584
Query: 405 LLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKN 464
L SA +H K D +G E+ L++ +P S +I++N YA G W++V VR MK+
Sbjct: 585 LFSACRLH--KNLD-LGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKD 641
Query: 465 VGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+GLKK G SW+E+ I F+ +S L GI IL L HM+
Sbjct: 642 LGLKKNPGCSWIEINEKIVPFFVEDNSHYHLEGIGNILSYLTSHME 687
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 185/377 (49%), Gaps = 19/377 (5%)
Query: 28 ARQCLSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNL-TYARS 83
AR+ + L+ + K L Q +H ++ GLQND + K L+ +L S NL YA++
Sbjct: 3 ARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLI---SLYVSCNLFDYAKN 59
Query: 84 ILCNYVNDSVPIPW-----NNLIRGYAWSDRPREAVWVFID-MKRRGIKPTEFTYPFVLK 137
+ D + P+ N L+ GY + EA+ +F M +KP +TYP VLK
Sbjct: 60 VF-----DVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLK 114
Query: 138 ACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS 197
AC + + G + + K GL D+ ++LV Y C A K+FD+M ++ V
Sbjct: 115 ACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVAC 174
Query: 198 WNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLI 257
WN +I+ ++ EA+ YF M+ GFEPD T+ +S+C L +L G+ +H +L+
Sbjct: 175 WNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELV 234
Query: 258 ERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALE 317
G ++ + AL+DMY KCG + A +F +M V W++MI G G ++
Sbjct: 235 NSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQ 294
Query: 318 LFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL 377
LF M + + P T L AC+ + + +G ++ H + I+P ++ D+
Sbjct: 295 LFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEG-KFVHGYIIRNRIQPDIFLNSSLMDLY 353
Query: 378 ARAGHLKEAYTFIMNMP 394
+ G ++ A T MP
Sbjct: 354 FKCGKVESAETIFKLMP 370
>gi|449471512|ref|XP_004153331.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 607
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 157/470 (33%), Positives = 252/470 (53%), Gaps = 16/470 (3%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPWNNLIR 102
+H VS L D +L S ++L AR + D +P + WN +I
Sbjct: 133 VHCIAIVSKLSGD--LLVNTAVLSLYSKLRSLVDARKLF-----DKMPEKDRVVWNIMIA 185
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
YA +P E + +F M R GI+ FT V+ + A++ ++ G Q A++ ++G DS
Sbjct: 186 AYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 245
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
V +N+L+ Y C+ ACK+F+ M ++SV+SW+ +I V+N A+ F KMK
Sbjct: 246 QVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMK 305
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
G + D M+ +L A +G L K++H ++ G L TAL+ YAKCG++
Sbjct: 306 SDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIE 365
Query: 283 CARLLF--SRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
A+ LF ++++ ++ W++MI A HG + +L++ MK S+ P+ VTFLG+L A
Sbjct: 366 MAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 425
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPI 400
C ++G+VE G +F EM +G +P + HY M ++L RAG + EA + NMP +P+
Sbjct: 426 CVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDAR 485
Query: 401 VLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRR 460
V LLSA +H E +L+ +EPR + N ++++N YA G W+ V+ +R
Sbjct: 486 VWGPLLSACKMHPGSKLAEFAAE---KLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRS 542
Query: 461 FMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
F++N GLKK+ G SW+E+ G + F + IY IL L L +K
Sbjct: 543 FLRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIK 592
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 115/240 (47%), Gaps = 1/240 (0%)
Query: 116 VFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYG 175
VF M + P FT+ +L+ A ++ + V S L D+ N ++ Y
Sbjct: 98 VFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYS 157
Query: 176 SCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLV 235
R DA K+FD M E+ V WN++I E + F M G D T L
Sbjct: 158 KLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALP 217
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
V+S+ +L + GK H ++ G+ + +LIDMY +C + A +F+ M + +
Sbjct: 218 VISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKS 277
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
V +WSAMI G ++G + AL LFS MK+ I ++V + +L A H G +E+ +Y H
Sbjct: 278 VISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALEN-VKYLH 336
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 104/234 (44%), Gaps = 6/234 (2%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M + + P E TYPFVL++C+ S + G + + K G D L Y C
Sbjct: 1 MVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIE 60
Query: 180 KRDACKVFDDMCERSV--VSWNVIITVCVENLWLGEAV-GYFVKMKDLGFEPDETTMLVV 236
+A ++FD +RSV + W +T GE + F +M PD T +
Sbjct: 61 FENAHQLFD---KRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNL 117
Query: 237 LSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINV 296
L L ++ L K VH I + + TA++ +Y+K ++ AR LF +M E +
Sbjct: 118 LRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDR 177
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
W+ MI A+ G E LELF +M S I + T L V+ + V+ G
Sbjct: 178 VVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWG 231
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 161/516 (31%), Positives = 261/516 (50%), Gaps = 37/516 (7%)
Query: 25 LSKARQCLSFLKLCCSK----KHLYQIHAQIQVSGLQNDAQILKELV------------- 67
LS FL C+K + QIHAQI GL D + L+
Sbjct: 74 LSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAH 133
Query: 68 RFCTLSSSKNLTYARSILCNYVN-----------DSVPI----PWNNLIRGYAWSDRPRE 112
+ SS +++ +++ Y + D +PI WN +I GYA R +E
Sbjct: 134 KVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKE 193
Query: 113 AVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVR 172
A+ +F +M + +KP E T VL C + G Q+ + + G S++ N L+
Sbjct: 194 ALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALID 253
Query: 173 FYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETT 232
Y C A +F+ + + V+SWN +I EA+ F +M LG P++ T
Sbjct: 254 LYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVT 313
Query: 233 MLVVLSACTELGNLSLGKWVHLQLIER--GTVLNCQLGTALIDMYAKCGAVGCARLLFSR 290
ML +L AC LG + +G+W+H+ + ++ G + N L T+LIDMYAKCG + A +F
Sbjct: 314 MLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDT 373
Query: 291 MEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
+ ++ + +AMI G A HG A+ A +L S MK I P+ +TF+G+L AC+HAG+ + G
Sbjct: 374 ILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLG 433
Query: 351 YRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASS 410
+ F M + I+P HY M D+L R+G KEA I +M +P+ ++ +LL A
Sbjct: 434 RKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACK 493
Query: 411 IHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKM 470
IH +G + ++L+++EP+ + V+++N YA W+ V+ VR + + GLKK+
Sbjct: 494 IHK---NLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKV 550
Query: 471 KGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
G S +E+ +H F G + IY++LE ++
Sbjct: 551 PGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLEEID 586
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 180/366 (49%), Gaps = 36/366 (9%)
Query: 55 GLQNDAQILKELVRFCTLSSS-KNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREA 113
GL N L +L+ FC L+ L YA S+ + + + WN +IRG+A S P A
Sbjct: 4 GLHNTNYALSKLLDFCILTPYFHGLPYAISVF-KSIQEPNQLSWNTMIRGHALSSDPISA 62
Query: 114 VWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRF 173
+ +++ M G+ P +T+PF+ K+CA+ EG Q+ A + K GL D++ + +L+
Sbjct: 63 LNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISM 122
Query: 174 YGSCRRKRDACKVFDDMCER-------------------------------SVVSWNVII 202
Y DA KVFD R VVSWN +I
Sbjct: 123 YAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMI 182
Query: 203 TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV 262
+ E EA+ F +M + +PDE+TM VLS CT GN+ LG+ +H + G
Sbjct: 183 SGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFG 242
Query: 263 LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM 322
N +L ALID+Y+KCG + A LF ++ +V +W+ +I G A + +EAL +F M
Sbjct: 243 SNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEM 302
Query: 323 KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM--EHVHGIKPMRIHYHTMADILARA 380
+PN VT L +L AC H G ++ G R+ H + + GI ++ D+ A+
Sbjct: 303 LKLGETPNDVTMLSILPACAHLGAIDIG-RWIHVYIDKKLKGIITNTSLQTSLIDMYAKC 361
Query: 381 GHLKEA 386
G+++ A
Sbjct: 362 GNIEAA 367
>gi|224090799|ref|XP_002309086.1| predicted protein [Populus trichocarpa]
gi|222855062|gb|EEE92609.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 163/491 (33%), Positives = 255/491 (51%), Gaps = 23/491 (4%)
Query: 34 FLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
+K C ++Q IH ++ GL D + LV + S+ + AR + + +
Sbjct: 66 LIKGLCEVMEVFQVKKIHGLVRKLGLDLDMYVGSSLVS--SYLKSELMKEARELF-DEIP 122
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
D + WN+++ GYA R EA+ V +M + G+ ++FT VL A + G
Sbjct: 123 DRDVVLWNSMVNGYAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAGRGDFDNGRL 182
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT---VCVE 207
V + K G DS V N L+ YG CR DA ++F+ M E+ + SWN I++ +C +
Sbjct: 183 VHGFMIKMGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSILSANELCSD 242
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV----- 262
+ + F +M G + D T+ +L AC+ L L G+ +H +I G V
Sbjct: 243 H---DGTLRLFDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNGFVKDGES 299
Query: 263 ---LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELF 319
N Q AL+DMYAKCG++ A ++F M + +W+ MI+G HGY EAL +F
Sbjct: 300 ENMYNLQTINALMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGYGMHGYGNEALYMF 359
Query: 320 SNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILAR 379
S+M S + PN +TF+GVL AC+HAG + G ++ EME HG+ P HY + D+L R
Sbjct: 360 SDMCKSGLKPNEITFVGVLLACSHAGFISQGIKFLGEMELKHGVVPTIQHYTCVIDMLGR 419
Query: 380 AGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNL 439
AG L+EAY + MP Q NP+V RALL+A ++ + +++ EL P N
Sbjct: 420 AGQLEEAYKLAVTMPIQTNPVVWRALLAACQLYG---NVDLAEVAAQKVFELNPAHCGNY 476
Query: 440 VIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIY 499
V+++N Y G +++V ++R M+ +KK G SW+EL ++ F +G + E IY
Sbjct: 477 VLMSNAYVAAGRYQEVLDIRHTMRQQDVKKTPGCSWIELKNGMNTFINGDRNHPEARLIY 536
Query: 500 QILETLNLHMK 510
L L H++
Sbjct: 537 PELHLLAAHIR 547
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 159/330 (48%), Gaps = 25/330 (7%)
Query: 75 SKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPF 134
++ YAR++ +N LI G+ + P++ + + +M++ G+ P ++T+P
Sbjct: 16 NRTADYARNVF----------AYNALISGFVLNGLPQDGLGAYEEMRQAGVLPDKYTFPC 65
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
++K E+ + + ++ V K GLD D+Y ++LV Y ++A ++FD++ +R
Sbjct: 66 LIKGLCEVMEVFQVKKIHGLVRKLGLDLDMYVGSSLVSSYLKSELMKEARELFDEIPDRD 125
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHL 254
VV WN ++ + EA+G +M G + T+ VLS G+ G+ VH
Sbjct: 126 VVLWNSMVNGYAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAGRGDFDNGRLVHG 185
Query: 255 QLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEE 314
+I+ G + ALIDMY KC V A +F M E ++++W++++ +
Sbjct: 186 FMIKMGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSILSANELCSDHDG 245
Query: 315 ALELFSNMKNSSISPNYVTFLGVLCACNHAG-----------MVEDGYRYFHEMEHVHGI 363
L LF M + + VT +L AC+H M+ +G+ E E+++ +
Sbjct: 246 TLRLFDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNGFVKDGESENMYNL 305
Query: 364 KPMRIHYHTMADILARAGHLKEAYTFIMNM 393
+ + + + D+ A+ G +++A NM
Sbjct: 306 QTI----NALMDMYAKCGSMRDAGMVFYNM 331
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 2/179 (1%)
Query: 174 YGSCRRKRDACKVFDDMCE--RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDET 231
Y C + A V + + R+V ++N +I+ V N + +G + +M+ G PD+
Sbjct: 2 YAKCNQMNQALLVLNRTADYARNVFAYNALISGFVLNGLPQDGLGAYEEMRQAGVLPDKY 61
Query: 232 TMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM 291
T ++ E+ + K +H + + G L+ +G++L+ Y K + AR LF +
Sbjct: 62 TFPCLIKGLCEVMEVFQVKKIHGLVRKLGLDLDMYVGSSLVSSYLKSELMKEARELFDEI 121
Query: 292 EEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
+ +V W++M+ G AQ G +EAL + M + + T GVL G ++G
Sbjct: 122 PDRDVVLWNSMVNGYAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAGRGDFDNG 180
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 166/499 (33%), Positives = 247/499 (49%), Gaps = 47/499 (9%)
Query: 49 AQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPI----PWNNLIRGY 104
A + GL +D ++ F LS + AR + D P+ WN LI GY
Sbjct: 149 AHVLRLGLDSDVFVVNAATHF--LSIRGPMEDARRLF-----DRSPVRDLVSWNTLIGGY 201
Query: 105 AWSDRPREAVWVFIDMKRRG--IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
P EA+ +F M ++P E T + C ++ L G ++ V G+
Sbjct: 202 VRRGNPAEALELFWRMVAEDAVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSC 261
Query: 163 DVYTNNNLVRFYGSCRRKR-------------------------------DACKVFDDMC 191
V N L+ Y C DA KVFD+M
Sbjct: 262 TVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMP 321
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
ER V WN ++T V+ EA+ F +M++ PDE TM+ +L+AC++LG L +G W
Sbjct: 322 ERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMW 381
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
VH + + V + LGT+LIDMYAKCG + A +F + E N TW+AMI GLA HG+
Sbjct: 382 VHRYIEKHRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLANHGH 441
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
A EA+E F M P+ +TF+GVL AC HAG+V++G +F ME + ++ HY
Sbjct: 442 ANEAIEHFRTMIELGQKPDEITFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMKHYS 501
Query: 372 TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLEL 431
M D+L RAGHL EA + MP +P+ +V A+ A + + +G + +L+E+
Sbjct: 502 CMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWGAIFFACRM---QGNISLGEKAAMKLVEI 558
Query: 432 EPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDS 491
+P S V++AN YAE M +K VR M+++G++K+ G S +EL G +H F S
Sbjct: 559 DPSDSGIYVLLANMYAEANMRKKADKVRAMMRHLGVEKVPGCSCIELNGVVHEFIVKDKS 618
Query: 492 QVELAGIYQILETLNLHMK 510
++ IY L + L +K
Sbjct: 619 HMDSHAIYDCLHEITLQIK 637
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 188/422 (44%), Gaps = 65/422 (15%)
Query: 46 QIHAQIQVSGLQNDAQIL---------KELVRFCTLSSSKNLTYARSILCNYVNDSVPI- 95
QIHA + +GL D L S L +A ++L S+P
Sbjct: 28 QIHAHLLAAGLLQDFSSLLAAAYALSTTATATDARTSPPSPLRHALALL-----SSLPAS 82
Query: 96 PWNNLIRGYAWSDRP--------REAVWVFIDMKRRGI-KPTEFTYPFVLKACAEISGLN 146
+N IR + SD R + ++ + R G +P T+PF+LKACA +
Sbjct: 83 AYNAAIRALSLSDDGDRHGHGVVRRCLPLYRALLRSGTARPDHLTFPFLLKACARLREWG 142
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G A+V + GLDSDV+ N F DA ++FD R +VSWN +I V
Sbjct: 143 YGDAALAHVLRLGLDSDVFVVNAATHFLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYV 202
Query: 207 ENLWLGEAVGYFVKM--KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
EA+ F +M +D PDE TM+ +S C ++ +L LG+ +H + G
Sbjct: 203 RRGNPAEALELFWRMVAEDAVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCT 262
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE----------- 313
+L AL+DMY KCG++ A+ +F R+E V +W+ MI+G A+ G +
Sbjct: 263 VRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPE 322
Query: 314 --------------------EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG--- 350
EAL LF M+ +S+ P+ +T + +L AC+ G +E G
Sbjct: 323 RDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWV 382
Query: 351 YRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASS 410
+RY + V + ++ D+ A+ G++++A +P + N + A++ +
Sbjct: 383 HRYIEKHRLVFSVALGT----SLIDMYAKCGNIEKAIHIFKEIP-EKNALTWTAMICGLA 437
Query: 411 IH 412
H
Sbjct: 438 NH 439
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 156/468 (33%), Positives = 248/468 (52%), Gaps = 9/468 (1%)
Query: 46 QIHAQIQVSGLQNDAQI-LKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGY 104
Q+H+ SGL +D + L ++ C S+ ++ R + + + D + W LI GY
Sbjct: 290 QLHSWAIRSGLADDVECSLVDMYAKC--SADGSVDDCRKVF-DRMQDHSVMSWTALITGY 346
Query: 105 AWS-DRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
+ + EA+ +F +M +G ++P FT+ KAC +S G QV + K GL S
Sbjct: 347 MQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLAS 406
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
+ +N+++ + C R DA F+ + E+++VS+N + NL A ++
Sbjct: 407 NSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIA 466
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
+ T +LS +G+L G+ +H Q+++ G N + ALI MY+KCG++
Sbjct: 467 ERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSID 526
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
A +FS M+ NV +W++MI G A+HG+AE LE F+ M + PN VT++ +L AC+
Sbjct: 527 TASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACS 586
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVL 402
H G+V +G+R+F+ M H IKP HY M D+L RAG L +A+ FI MPFQ + +V
Sbjct: 587 HVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVW 646
Query: 403 RALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFM 462
R L A +H +G R++LE +P + ++N YA G WE+ + +RR M
Sbjct: 647 RTFLGACRVHS---NTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEESTEMRRKM 703
Query: 463 KNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
K L K G SW+E+G +H+FY G S IY L+ L +K
Sbjct: 704 KERNLVKEGGCSWIEVGDKVHKFYVGDTSHPNAHQIYDELDWLITEIK 751
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 168/323 (52%), Gaps = 16/323 (4%)
Query: 33 SFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL--CN 87
S LK C +H +HA++ ++ D+ + L+ S S +LT A+ +
Sbjct: 67 SLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISL--YSKSGDLTKAKDVFETMG 124
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+ W+ ++ + + R +A+ +F++ G+ P ++ Y V++AC+ +
Sbjct: 125 RFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGV 184
Query: 148 GMQVQANVTKSG-LDSDVYTNNNLVRFYGSCRRK-RDACKVFDDMCERSVVSWNVIITVC 205
G + + K+G +SDV +L+ + +A KVFD M E +VV+W ++IT C
Sbjct: 185 GRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRC 244
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
++ + EA+ +F+ M GFE D+ T+ V SAC EL NLSLG+ +H I G L
Sbjct: 245 MQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSG--LAD 302
Query: 266 QLGTALIDMYAKC---GAVGCARLLFSRMEEINVWTWSAMILGLAQH-GYAEEALELFSN 321
+ +L+DMYAKC G+V R +F RM++ +V +W+A+I G Q+ A EA+ LFS
Sbjct: 303 DVECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSE 362
Query: 322 M-KNSSISPNYVTFLGVLCACNH 343
M + PN+ TF AC +
Sbjct: 363 MITQGHVEPNHFTFSSAFKACGN 385
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 111/237 (46%), Gaps = 6/237 (2%)
Query: 111 REAVWVFIDMKRRGIKPTE-FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNN 169
R AV M R GI+P + T+ +LK+C G V A + + ++ D N+
Sbjct: 43 RGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNS 102
Query: 170 LVRFY---GSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
L+ Y G + +D + +R VVSW+ ++ N +A+ FV+ ++G
Sbjct: 103 LISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGL 162
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNCQLGTALIDMYAKC-GAVGCA 284
P++ V+ AC+ + +G+ + L++ G + +G +LIDM+ K + A
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
+F +M E+NV TW+ MI Q G+ EA+ F +M S + T V AC
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 4/141 (2%)
Query: 214 AVGYFVKMKDLGFEP-DETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
AV M G P D T +L +C + LGK VH +LIE + L +LI
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLI 104
Query: 273 DMYAKCGAVGCARLLFSRMEEI---NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
+Y+K G + A+ +F M +V +WSAM+ +G +A++LF + P
Sbjct: 105 SLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVP 164
Query: 330 NYVTFLGVLCACNHAGMVEDG 350
N + V+ AC+++ V G
Sbjct: 165 NDYCYTAVIRACSNSDFVGVG 185
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/427 (35%), Positives = 233/427 (54%), Gaps = 7/427 (1%)
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
+ + + WN LI + + +P EA+ +F+ M+ +G+ P ++ L AC IS G
Sbjct: 364 IKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLG 423
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
Q+ + K+G +D + N L+ Y C A K+F+ + E+S+V+WN +I +N
Sbjct: 424 AQIHGYIIKTGNFND-FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQN 482
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+ EA+ F +M + D+ T L V+ AC+ LG L GKWVH +LI G + L
Sbjct: 483 GYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLD 542
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
TAL DMY+KCG + A +F RM E ++ +WS MI G HG + LF+ M S I
Sbjct: 543 TALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIK 602
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
PN +TF+ +L AC+HAG VE+G YF+ M G++P H+ M D+L+RAG L AY
Sbjct: 603 PNDITFMHILSACSHAGAVEEGKLYFNSMSEF-GVEPKHDHFACMVDLLSRAGDLNGAYQ 661
Query: 389 FIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAE 448
I ++PF N + ALL+ IH + + + + LL+++ + +++N YAE
Sbjct: 662 IITSLPFPANSSIWGALLNGCRIHK---RIDIIKSIEKNLLDVDTADTGYYTLLSNIYAE 718
Query: 449 VGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN-- 506
G W+K VR MK+ GL+K+ G S +E+ I+RF G S + IY+ LE
Sbjct: 719 EGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSL 778
Query: 507 LHMKVLN 513
+H +V +
Sbjct: 779 VHAQVYD 785
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 160/328 (48%), Gaps = 20/328 (6%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQN----DAQILKELVRFCTLSSSKNLTYARSILCN 87
+ + C + L Q+HA + ++GL ++++ + SSK
Sbjct: 5 MPLFRRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKR---------- 54
Query: 88 YVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVLKACAEI 142
V D+ P P W LI+ Y W EAV ++ +M + + + F +P VLKAC+
Sbjct: 55 -VFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGF 113
Query: 143 SGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII 202
L+ G +V V K G +SD +L+ YG DACK FD M R VV+W+ I+
Sbjct: 114 GDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIV 173
Query: 203 TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV 262
V+N E + F +M EPD TML V AC+ELG+L LG+ VH ++ R
Sbjct: 174 LNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIE 233
Query: 263 LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM 322
N L +LI MY K G + A LF + W+ MI Q G +EAL +F+ M
Sbjct: 234 SNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKM 293
Query: 323 KNSSISPNYVTFLGVLCACNHAGMVEDG 350
+ + PN VT +GVLCAC G V++G
Sbjct: 294 QEFKMEPNQVTMVGVLCACARLGRVKEG 321
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 161/293 (54%), Gaps = 3/293 (1%)
Query: 96 PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANV 155
PW +I Y S +EA+ VF M+ ++P + T VL ACA + + EG V V
Sbjct: 269 PWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFV 328
Query: 156 TKSGLDSDV-YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ +D ++ + L+ Y RD KVF+ + E++++SWN +I++ N EA
Sbjct: 329 IRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEA 388
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ FV+M+ G PD ++ LSAC + LG +H +I+ G N + ALIDM
Sbjct: 389 LLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGN-FNDFVQNALIDM 447
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG V A +F +++E ++ TW++MI G +Q+GY+ EA+ LF M + + + +TF
Sbjct: 448 YAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTF 507
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
L V+ AC+H G +E G ++ H ++G++ + D+ ++ G L+ A+
Sbjct: 508 LSVIQACSHLGYLEKG-KWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAH 559
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 145/306 (47%), Gaps = 15/306 (4%)
Query: 33 SFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S LK C L ++H ++ G ++DA + L+ C L A
Sbjct: 105 SVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLL--CMYGEMSCLDDACKAF---- 158
Query: 90 NDSVPI----PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL 145
D++PI W++++ + + + E + +F M ++P T V +AC+E+ L
Sbjct: 159 -DTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSL 217
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
G V V + ++S+ NN+L+ YG A ++F+++ R W +I+
Sbjct: 218 RLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCY 277
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
++ EA+ F KM++ EP++ TM+ VL AC LG + G+ VH +I R
Sbjct: 278 NQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPEL 337
Query: 266 Q-LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
LG AL+++YA G + +F ++E + +W+ +I ++G EEAL LF M+
Sbjct: 338 DFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQT 397
Query: 325 SSISPN 330
+ P+
Sbjct: 398 QGLMPD 403
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 168/489 (34%), Positives = 251/489 (51%), Gaps = 40/489 (8%)
Query: 55 GLQNDAQILKELVRFCTLSSSKNLTYARSIL-CNYVNDSVPIPWNNLIRGYAWSDRPREA 113
G D ++ + F + SS + AR + ++V D V WN LI GY PREA
Sbjct: 150 GFHADVFVVNAAMHFLAVCSS--MAEARKLFDGSHVRDLVS--WNTLIGGYVRRGVPREA 205
Query: 114 VWVFIDMKRRG-IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVR 172
+ +F M G + P E T V+ A++ L G ++ V G+ V N ++
Sbjct: 206 LEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMD 265
Query: 173 FYGSC----RRKR---------------------------DACKVFDDMCERSVVSWNVI 201
Y C R K DA KVFD+M ER V WN +
Sbjct: 266 MYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNAL 325
Query: 202 ITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGT 261
+T V+ EA+ F M++ EPD+ TM+ +LSAC++LG L +G WVH + R
Sbjct: 326 MTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRV 385
Query: 262 VLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSN 321
L+ LGT L+DMY+KCG + A +F + E N TW+AMI GLA HG+A+ A++ F
Sbjct: 386 SLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQR 445
Query: 322 MKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAG 381
M + P+ +TF+GVL AC HAG+V++G +F M + ++ HY M D+L RAG
Sbjct: 446 MIELGLQPDEITFIGVLSACCHAGLVKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAG 505
Query: 382 HLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVI 441
+L EA + MP +P+ +V AL A +H +G + +L+EL+P S V+
Sbjct: 506 YLDEAEHLVNTMPMEPDAVVWGALFFACRMHG---NITLGEKAAMKLVELDPGDSGIYVL 562
Query: 442 VANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQI 501
+AN YAE M +K VR M+++G++K+ G S +EL G +H F S ++A IY
Sbjct: 563 LANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHTDIAAIYDC 622
Query: 502 LETLNLHMK 510
L + L ++
Sbjct: 623 LHEITLQIE 631
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 152/327 (46%), Gaps = 44/327 (13%)
Query: 123 RGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRD 182
R +P T+PF+LKACA + N G V NV G +DV+ N + F C +
Sbjct: 114 RSARPDHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAE 173
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM-KDLGFEPDETTMLVVLSACT 241
A K+FD R +VSWN +I V EA+ F +M D PDE TM+ V+S
Sbjct: 174 ARKLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSA 233
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
+L +L LG+ +H + G +L ++DMY KCG + A+ +F +++ + +W+
Sbjct: 234 QLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTT 293
Query: 302 MILGLAQHGY-------------------------------AEEALELFSNMKNSSISPN 330
MI+G AQ G +EAL LF +M+ + + P+
Sbjct: 294 MIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPD 353
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM-----ADILARAGHLKE 385
+T + +L AC+ G +E G + H H I R+ M D+ ++ G++++
Sbjct: 354 DITMVNLLSACSQLGALEMGM-WVH-----HYIDRRRVSLSVMLGTNLVDMYSKCGNIEK 407
Query: 386 AYTFIMNMPFQPNPIVLRALLSASSIH 412
A +P + N + A++S + H
Sbjct: 408 AIRVFKEIP-EKNALTWTAMISGLANH 433
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 247/468 (52%), Gaps = 9/468 (1%)
Query: 46 QIHAQIQVSGLQNDAQI-LKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGY 104
Q+H+ SGL +D + L ++ C S+ ++ R + + + D + W LI GY
Sbjct: 290 QLHSWAIRSGLVDDVECSLVDMYAKC--SADGSVDDCRKVF-DRMEDHSVMSWTALITGY 346
Query: 105 AWS-DRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
+ + EA+ +F +M +G ++P FT+ KAC +S G QV K GL S
Sbjct: 347 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS 406
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
+ N+++ + R DA + F+ + E+++VS+N + NL +A ++
Sbjct: 407 NSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEIT 466
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
+ T +LS +G++ G+ +H Q+++ G N + ALI MY+KCG++
Sbjct: 467 ERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSID 526
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
A +F+ ME NV +W++MI G A+HG+A LE F+ M + PN VT++ +L AC+
Sbjct: 527 TASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACS 586
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVL 402
H G+V +G+R+F+ M H IKP HY M D+L RAG L +A+ FI MPFQ + +V
Sbjct: 587 HVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVW 646
Query: 403 RALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFM 462
R L A +H +G R++LEL+P + ++N YA G WE+ + +RR M
Sbjct: 647 RTFLGACRVHS---NTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKM 703
Query: 463 KNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
K L K G SW+E+G IH+FY G + IY L+ L +K
Sbjct: 704 KERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIK 751
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 142/256 (55%), Gaps = 9/256 (3%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W+ ++ Y + R +A+ VF++ G+ P ++ Y V++AC+ + G
Sbjct: 132 VSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGF 191
Query: 155 VTKSG-LDSDVYTNNNLVRFYGSCRRK-RDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
+ K+G +SDV +L+ + +A KVFD M E +VV+W ++IT C++ +
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPR 251
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
EA+ +F+ M GFE D+ T+ V SAC EL NLSLGK +H I G V + + +L+
Sbjct: 252 EAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVE--CSLV 309
Query: 273 DMYAKC---GAVGCARLLFSRMEEINVWTWSAMILGLAQH-GYAEEALELFSNM-KNSSI 327
DMYAKC G+V R +F RME+ +V +W+A+I G ++ A EA+ LFS M +
Sbjct: 310 DMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHV 369
Query: 328 SPNYVTFLGVLCACNH 343
PN+ TF AC +
Sbjct: 370 EPNHFTFSSAFKACGN 385
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 109/241 (45%), Gaps = 14/241 (5%)
Query: 111 REAVWVFIDMKRRGIKPTE-FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNN 169
R AV M R GI+P + T+ +LK+C G V A + + ++ D N+
Sbjct: 43 RGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNS 102
Query: 170 LVRFYGSCRRKRDACKVFDDM---CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
L+ Y A VF+ M +R VVSW+ ++ N +A+ FV+ +LG
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162
Query: 227 EPDETTMLVVLSACTE-----LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC-GA 280
P++ V+ AC+ +G ++LG + E + C +LIDM+ K +
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGC----SLIDMFVKGENS 218
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
A +F +M E+NV TW+ MI Q G+ EA+ F +M S + T V A
Sbjct: 219 FENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSA 278
Query: 341 C 341
C
Sbjct: 279 C 279
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 4/141 (2%)
Query: 214 AVGYFVKMKDLGFEP-DETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
AV M G P D T +L +C + LGK VH +LIE + L +LI
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 273 DMYAKCGAVGCARLLFSRMEEI---NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
+Y+K G A +F M +V +WSAM+ +G +A+++F + P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 330 NYVTFLGVLCACNHAGMVEDG 350
N + V+ AC+++ V G
Sbjct: 165 NDYCYTAVIRACSNSDFVGVG 185
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/425 (33%), Positives = 228/425 (53%), Gaps = 3/425 (0%)
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
L + D I W ++ G+ + EA+ +F M+ +GI ++T+ +L AC +S
Sbjct: 228 LFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSA 287
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L +G Q+ A + ++ D +V+ + LV Y CR + A VF M ++++SW +I
Sbjct: 288 LEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVG 347
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
+N EAV F +M+ G +PD+ T+ V+S+C L +L G H + G +
Sbjct: 348 YGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHY 407
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+ AL+ +Y KCG++ A LF M + +W+A++ G AQ G A+E ++LF M
Sbjct: 408 ITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLA 467
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ P+ VTF+GVL AC+ AG VE G YFH M+ HGI P+ HY M D+ +R+G LK
Sbjct: 468 KGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLK 527
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
EA FI MP P+ I LLSA + + +G LLE++P+ + V++ +
Sbjct: 528 EAEEFIKQMPMHPDAIGWGTLLSACRL---RGDMEIGKWAAENLLEIDPQNPASYVLLCS 584
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILET 504
+A G W +V+ +RR M++ +KK G SW++ +H F + S GIY+ LE
Sbjct: 585 MHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEW 644
Query: 505 LNLHM 509
LN M
Sbjct: 645 LNSKM 649
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 172/363 (47%), Gaps = 43/363 (11%)
Query: 71 TLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKR--RGIKPT 128
TL+ ++ L+ ++ + + + +N +I G++ +AV V++ + + ++P+
Sbjct: 81 TLAHARLLSDMEALFASMTQRDI-VSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPS 139
Query: 129 EFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGS------------ 176
T ++ A + + G Q + + G ++ + + LV Y
Sbjct: 140 RITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFD 199
Query: 177 -------------------CRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
C+ +A ++F+ M +R ++W ++T +N EA+
Sbjct: 200 EVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEI 259
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
F +M+ G D+ T +L+AC L L GK +H +I N +G+AL+DMY+K
Sbjct: 260 FRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSK 319
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
C ++ A +F RM N+ +W+A+I+G Q+G +EEA+ +FS M+ I P+ T V
Sbjct: 320 CRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSV 379
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL----ARAGHLKEAYTFIMNM 393
+ +C + +E+G + FH + V G+ +HY T+++ L + G +++A+ M
Sbjct: 380 ISSCANLASLEEGAQ-FHCLALVSGL----MHYITVSNALVTLYGKCGSIEDAHRLFDEM 434
Query: 394 PFQ 396
F
Sbjct: 435 SFH 437
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 33/221 (14%)
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM- 221
+++T N L+ R D +F M +R +VS+N +I +AV ++ +
Sbjct: 71 NLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALL 130
Query: 222 -KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
D P TM ++ A + LG+ +LGK H Q++ G N +G+ L+DMYAK
Sbjct: 131 QADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSL 190
Query: 281 VG--------------------------C-----ARLLFSRMEEINVWTWSAMILGLAQH 309
VG C AR LF M + + TW+ M+ G Q+
Sbjct: 191 VGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQN 250
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
G EALE+F M+ I+ + TF +L AC +E G
Sbjct: 251 GLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQG 291
>gi|413938369|gb|AFW72920.1| hypothetical protein ZEAMMB73_491813 [Zea mays]
Length = 625
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 164/479 (34%), Positives = 250/479 (52%), Gaps = 13/479 (2%)
Query: 40 SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSS-SKNLTYARSILCNYVNDSVPIPWN 98
S + ++HA+ GL + + L+ C +S + A SI + V +N
Sbjct: 57 SLDEVRKVHARHIKLGLDRCPRYARPLLAACAVSGWPGGMELAASIFESLVEPEA-FDYN 115
Query: 99 NLIRGY---AWSDR-PREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
L+RG+ DR P A+ ++ID G+ P +T+PFVLKACA+++ L EG Q+QA+
Sbjct: 116 TLMRGHVSGGGGDRDPAAALRLYIDGLEAGVSPDSYTFPFVLKACAQLAALQEGRQLQAH 175
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD--DMCERSVVSWNVIITVCVENLWLG 212
+ K G D + N+L+ FYG C A FD + ER+ VSW+ ++ + G
Sbjct: 176 IVKLGFQHDEHVQNSLISFYGKCGAPAMARLAFDRVEAEERTTVSWSALLAAYTKAGLWG 235
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
E + F M G+ PDE++M+ LSAC LG+ G+ VH L+ LN + T+L+
Sbjct: 236 ECLASFGSMMLDGWRPDESSMVSALSACAHLGSFDAGRSVHCALLRNTARLNTIMLTSLL 295
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
DMYAKCG++ A F M++ + W +SAM+ GLA HG +AL++F M +P+
Sbjct: 296 DMYAKCGSIEKAAAAFDAMDDKSAWAYSAMLSGLALHGDGRKALQVFDAMVREGHAPDAA 355
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
++GVL AC+ AG++EDG R F M H + P +HY M D++ARAG L +A I
Sbjct: 356 AYVGVLNACSRAGLLEDGLRCFDRMRLEHKVAPNALHYGCMVDLMARAGRLDDARALIGT 415
Query: 393 MPFQPNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGM 451
MP P R+LL+A IH D E+RR L + + VIVA+ +A
Sbjct: 416 MPTGPTDTAWRSLLNACRIHGDLDLAWHALQELRR----LGAANAGDYVIVADMHARAKN 471
Query: 452 WEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
W + +R + GL + G S VE+ G +HRF S + IY++L + ++
Sbjct: 472 WTAAAALRTEAVDSGLAQSLGFSAVEVRGELHRFVSQDMAHPRTRDIYEMLHQMEWQLR 530
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 247/468 (52%), Gaps = 9/468 (1%)
Query: 46 QIHAQIQVSGLQNDAQI-LKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGY 104
Q+H+ SGL +D + L ++ C S+ ++ R + + + D + W LI GY
Sbjct: 290 QLHSWAIRSGLVDDVECSLVDMYAKC--SADGSVDDCRKVF-DRMEDHSVMSWTALITGY 346
Query: 105 AWS-DRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
+ + EA+ +F +M +G ++P FT+ KAC +S G QV K GL S
Sbjct: 347 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS 406
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
+ N+++ + R DA + F+ + E+++VS+N + NL +A ++
Sbjct: 407 NSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEIT 466
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
+ T +LS +G++ G+ +H Q+++ G N + ALI MY+KCG++
Sbjct: 467 ERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSID 526
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
A +F+ ME NV +W++MI G A+HG+A LE F+ M + PN VT++ +L AC+
Sbjct: 527 TASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACS 586
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVL 402
H G+V +G+R+F+ M H IKP HY M D+L RAG L +A+ FI MPFQ + +V
Sbjct: 587 HVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVW 646
Query: 403 RALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFM 462
R L A +H +G R++LEL+P + ++N YA G WE+ + +RR M
Sbjct: 647 RTFLGACRVHS---NTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKM 703
Query: 463 KNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
K L K G SW+E+G IH+FY G + IY L+ L +K
Sbjct: 704 KERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIK 751
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 142/256 (55%), Gaps = 9/256 (3%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W+ ++ Y + R +A+ VF++ G+ P ++ Y V++AC+ + G
Sbjct: 132 VSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGF 191
Query: 155 VTKSG-LDSDVYTNNNLVRFYGSCRRK-RDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
+ K+G +SDV +L+ + +A KVFD M E +VV+W ++IT C++ +
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPR 251
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
EA+ +F+ M GFE D+ T+ V SAC EL NLSLGK +H I G V + + +L+
Sbjct: 252 EAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVE--CSLV 309
Query: 273 DMYAKC---GAVGCARLLFSRMEEINVWTWSAMILGLAQH-GYAEEALELFSNM-KNSSI 327
DMYAKC G+V R +F RME+ +V +W+A+I G ++ A EA+ LFS M +
Sbjct: 310 DMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHV 369
Query: 328 SPNYVTFLGVLCACNH 343
PN+ TF AC +
Sbjct: 370 EPNHFTFSSAFKACGN 385
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 109/241 (45%), Gaps = 14/241 (5%)
Query: 111 REAVWVFIDMKRRGIKPTE-FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNN 169
R AV M R GI+P + T+ +LK+C G V A + + ++ D N+
Sbjct: 43 RGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNS 102
Query: 170 LVRFYGSCRRKRDACKVFDDM---CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
L+ Y A VF+ M +R VVSW+ ++ N +A+ FV+ +LG
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162
Query: 227 EPDETTMLVVLSACTE-----LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC-GA 280
P++ V+ AC+ +G ++LG + E + C +LIDM+ K +
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGC----SLIDMFVKGENS 218
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
A +F +M E+NV TW+ MI Q G+ EA+ F +M S + T V A
Sbjct: 219 FENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSA 278
Query: 341 C 341
C
Sbjct: 279 C 279
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 4/141 (2%)
Query: 214 AVGYFVKMKDLGFEP-DETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
AV M G P D T +L +C + LGK VH +LIE + L +LI
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 273 DMYAKCGAVGCARLLFSRMEEI---NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
+Y+K G A +F M +V +WSAM+ +G +A+++F + P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 330 NYVTFLGVLCACNHAGMVEDG 350
N + V+ AC+++ V G
Sbjct: 165 NDYCYTAVIRACSNSDFVGVG 185
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 160/483 (33%), Positives = 252/483 (52%), Gaps = 11/483 (2%)
Query: 33 SFLKLCCSKKHLY-QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+ + CC L Q+H+ SG + + L+ + + +L A+ +
Sbjct: 145 AVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTY--YGKNGDLDDAKRVFYGMGGI 202
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
+ WN++I Y +A+ +F +M RRG+ FT VL A + L+ G+Q
Sbjct: 203 RDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQF 262
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDAC-KVFDDMCERSVVSWNVIITVCVENL- 209
+ K+G + + + L+ Y C C KVF+++ E +V WN +++ +N
Sbjct: 263 HGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEE 322
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN-CQLG 268
+L +A+ F +M+ +G+ P++ + + V+SAC+ L + S GK +H ++ N +
Sbjct: 323 FLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVD 382
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
ALI MY+KCG + AR LF RM E N + ++MI G AQHG E+L LF M I+
Sbjct: 383 NALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIA 442
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
P +TF+ VL AC H G VE+G+ YF+ M+ I+P HY M D+L RAG L EA
Sbjct: 443 PTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAEN 502
Query: 389 FIMNMPFQPNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYA 447
I MPF P I +LL A H + + N+V L+LEP + V+++N YA
Sbjct: 503 LIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQV----LQLEPSNAAPYVVLSNMYA 558
Query: 448 EVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNL 507
G WE+V+ VR+FM++ G+KK G SW+E+ IH F + S + IY+ LE ++
Sbjct: 559 SAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSG 618
Query: 508 HMK 510
MK
Sbjct: 619 KMK 621
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 168/340 (49%), Gaps = 12/340 (3%)
Query: 81 ARSILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
+R ++ + + D +P P +N LI YA A+ +F M+ G+ FT V+
Sbjct: 88 SRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVI 147
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE-RSV 195
AC + GL Q+ + SG DS V NN L+ +YG DA +VF M R
Sbjct: 148 TACCDDVGLIG--QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDE 205
Query: 196 VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQ 255
VSWN +I ++ +A+G F +M G D T+ VL+A T L +LS G H Q
Sbjct: 206 VSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQ 265
Query: 256 LIERGTVLNCQLGTALIDMYAKC-GAVGCARLLFSRMEEINVWTWSAMILGLAQH-GYAE 313
LI+ G N +G+ LID+Y+KC G + R +F + E ++ W+ M+ G +Q+ + E
Sbjct: 266 LIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLE 325
Query: 314 EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY-HT 372
+ALE F M+ PN +F+ V+ AC++ G + H + I RI +
Sbjct: 326 DALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQG-KQIHSLALKSDIPSNRISVDNA 384
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
+ + ++ G+L++A M + N + L ++++ + H
Sbjct: 385 LIAMYSKCGNLQDARRLFDRMA-EHNTVSLNSMIAGYAQH 423
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 17/212 (8%)
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK 220
D +V++ N ++ Y R A ++FD + E +VS+N +I+ + A+G F
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
M+++G + D T+ V++AC + ++ L +H + G + AL+ Y K G
Sbjct: 131 MREMGLDMDXFTLSAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188
Query: 281 VGCARLLFSRMEEI-NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
+ A+ +F M I + +W++MI+ QH +AL LF M ++ + T VL
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248
Query: 340 ACN-----------HAGMVEDGYRYFHEMEHV 360
A H +++ G FH+ HV
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTG---FHQNSHV 277
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 4/125 (3%)
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
+L C +LS GK +H I+ + I +Y+KCG + AR F + + N
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
V++++A+I A+ A +LF + P+ V++ ++ A G F
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPE----PDLVSYNTLISAYADCGETAPALGLFS 129
Query: 356 EMEHV 360
M +
Sbjct: 130 GMREM 134
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/427 (35%), Positives = 233/427 (54%), Gaps = 7/427 (1%)
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
+ + + WN LI + + +P EA+ +F+ M+ +G+ P ++ L AC IS G
Sbjct: 561 IKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLG 620
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
Q+ + K+G +D + N L+ Y C A K+F+ + E+S+V+WN +I +N
Sbjct: 621 AQIHGYIIKTGNFND-FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQN 679
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+ EA+ F +M + D+ T L V+ AC+ LG L GKWVH +LI G + L
Sbjct: 680 GYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLD 739
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
TAL DMY+KCG + A +F RM E ++ +WS MI G HG + LF+ M S I
Sbjct: 740 TALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIK 799
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
PN +TF+ +L AC+HAG VE+G YF+ M G++P H+ M D+L+RAG L AY
Sbjct: 800 PNDITFMHILSACSHAGAVEEGKLYFNSMSEF-GVEPKHDHFACMVDLLSRAGDLNGAYQ 858
Query: 389 FIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAE 448
I ++PF N + ALL+ IH + + + + LL+++ + +++N YAE
Sbjct: 859 IITSLPFPANSSIWGALLNGCRIHK---RIDIIKSIEKNLLDVDTADTGYYTLLSNIYAE 915
Query: 449 VGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN-- 506
G W+K VR MK+ GL+K+ G S +E+ I+RF G S + IY+ LE
Sbjct: 916 EGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSL 975
Query: 507 LHMKVLN 513
+H +V +
Sbjct: 976 VHAQVYD 982
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 192/422 (45%), Gaps = 75/422 (17%)
Query: 28 ARQCLSFLKLCCSKKHLYQIHAQIQVSGLQN----DAQILKELVRFCTLSSSKNLTYARS 83
+ + L+ K C + L Q+HA + ++GL ++++ + SSK
Sbjct: 348 SSRSLTSHKRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKR------ 401
Query: 84 ILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVLKA 138
V D+ P P W LI+ Y W EAV ++ +M + + + F +P VLKA
Sbjct: 402 -----VFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKA 456
Query: 139 CAEISGLN---------------------------------------------------- 146
C+ L+
Sbjct: 457 CSGFGDLSVGGKNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVK 516
Query: 147 EGMQVQANVTKSGLDSDV-YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
EG V V + +D ++ + L+ Y RD KVF+ + E++++SWN +I++
Sbjct: 517 EGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIF 576
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
N EA+ FV+M+ G PD ++ LSAC + LG +H +I+ G N
Sbjct: 577 TRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGN-FND 635
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
+ ALIDMYAKCG V A +F +++E ++ TW++MI G +Q+GY+ EA+ LF M +
Sbjct: 636 FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMN 695
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
+ + +TFL V+ AC+H G +E G ++ H ++G++ + D+ ++ G L+
Sbjct: 696 CVKMDKLTFLSVIQACSHLGYLEKG-KWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQM 754
Query: 386 AY 387
A+
Sbjct: 755 AH 756
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 160/483 (33%), Positives = 252/483 (52%), Gaps = 11/483 (2%)
Query: 33 SFLKLCCSKKHLY-QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+ + CC L Q+H+ SG + + L+ + + +L A+ +
Sbjct: 145 AVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTY--YGKNGDLDDAKRVFYGMGGI 202
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
+ WN++I Y +A+ +F +M RRG+ FT VL A + L+ G+Q
Sbjct: 203 RDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQF 262
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDAC-KVFDDMCERSVVSWNVIITVCVENL- 209
+ K+G + + + L+ Y C C KVF+++ E +V WN +++ +N
Sbjct: 263 HGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEE 322
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN-CQLG 268
+L +A+ F +M+ +G+ P++ + + V+SAC+ L + S GK +H ++ N +
Sbjct: 323 FLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVD 382
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
ALI MY+KCG + AR LF RM E N + ++MI G AQHG E+L LF M I+
Sbjct: 383 NALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIA 442
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
P +TF+ VL AC H G VE+G+ YF+ M+ I+P HY M D+L RAG L EA
Sbjct: 443 PTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAEN 502
Query: 389 FIMNMPFQPNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYA 447
I MPF P I +LL A H + + N+V L+LEP + V+++N YA
Sbjct: 503 LIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQV----LQLEPSNAAPYVVLSNMYA 558
Query: 448 EVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNL 507
G WE+V+ VR+FM++ G+KK G SW+E+ IH F + S + IY+ LE ++
Sbjct: 559 SAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSG 618
Query: 508 HMK 510
MK
Sbjct: 619 KMK 621
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 168/340 (49%), Gaps = 12/340 (3%)
Query: 81 ARSILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
+R ++ + + D +P P +N LI YA A+ +F M+ G+ FT V+
Sbjct: 88 SRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVI 147
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE-RSV 195
AC + GL Q+ + SG DS V NN L+ +YG DA +VF M R
Sbjct: 148 TACCDDVGLIG--QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDE 205
Query: 196 VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQ 255
VSWN +I ++ +A+G F +M G D T+ VL+A T L +LS G H Q
Sbjct: 206 VSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQ 265
Query: 256 LIERGTVLNCQLGTALIDMYAKC-GAVGCARLLFSRMEEINVWTWSAMILGLAQH-GYAE 313
LI+ G N +G+ LID+Y+KC G + R +F + E ++ W+ M+ G +Q+ + E
Sbjct: 266 LIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLE 325
Query: 314 EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY-HT 372
+ALE F M+ PN +F+ V+ AC++ G + H + I RI +
Sbjct: 326 DALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQG-KQIHSLALKSDIPSNRISVDNA 384
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
+ + ++ G+L++A M + N + L ++++ + H
Sbjct: 385 LIAMYSKCGNLQDARRLFDRMA-EHNTVSLNSMIAGYAQH 423
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 17/212 (8%)
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK 220
D +V++ N ++ Y R A ++FD + E +VS+N +I+ + A+G F
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
M+++G + D T+ V++AC + ++ L +H + G + AL+ Y K G
Sbjct: 131 MREMGLDMDGFTLSAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188
Query: 281 VGCARLLFSRMEEI-NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
+ A+ +F M I + +W++MI+ QH +AL LF M ++ + T VL
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248
Query: 340 ACN-----------HAGMVEDGYRYFHEMEHV 360
A H +++ G FH+ HV
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTG---FHQNSHV 277
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 4/125 (3%)
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
+L C +LS GK +H I+ + I +Y+KCG + AR F + + N
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
V++++A+I A+ A +LF + P+ V++ ++ A G F
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPE----PDLVSYNTLISAYADCGETAPALGLFS 129
Query: 356 EMEHV 360
M +
Sbjct: 130 GMREM 134
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 168/515 (32%), Positives = 260/515 (50%), Gaps = 47/515 (9%)
Query: 35 LKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP 94
L+ C S + Q HA + +GL +L++ SS +L+YA + D +P
Sbjct: 22 LESCKSMNQIKQTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLF-----DQIP 76
Query: 95 IP----WNNLIRGYA-WSDRPREAVWVFIDMKR-RGIKPTEFTYPFVLKACAEISGLNEG 148
P +N +I+ +A ++ +F+ M R G P +T+ FV KAC G+ EG
Sbjct: 77 KPDVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEG 136
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGS------CRRKRD-------------------- 182
Q++ + K GL+S+++ N ++R Y + RR D
Sbjct: 137 EQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGS 196
Query: 183 -----ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVL 237
A ++FD+M ER VVSW II V+ EA+ F +M G P+E T+ L
Sbjct: 197 GEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASAL 256
Query: 238 SACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME--EIN 295
+AC L L G+W+H+ + + +N +L +L+DMYAKCG + A +F ++
Sbjct: 257 AACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLK 316
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
VW W+AMI G A HG ++EA++LF MK +SPN VTF+ +L AC+H +VE+G YF
Sbjct: 317 VWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFK 376
Query: 356 EMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAK 415
M +GI+P HY M D+L R+G LKEA + NMP P+ + ALL A IH
Sbjct: 377 SMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDI 436
Query: 416 YQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSW 475
+ G + + + EL+ V++AN Y+ G W++ VR+ ++ G KK G S
Sbjct: 437 ER---GQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSS 493
Query: 476 VELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+EL G H+F G S + +Y L+ + +K
Sbjct: 494 IELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLK 528
>gi|3128231|gb|AAC26711.1| hypothetical protein [Arabidopsis thaliana]
gi|20197159|gb|AAM14947.1| hypothetical protein [Arabidopsis thaliana]
Length = 617
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/446 (34%), Positives = 238/446 (53%), Gaps = 12/446 (2%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H+ + GL+ D I L+ + + YAR + + + + + WN++I GY+
Sbjct: 150 VHSSLFKVGLERDVHINHSLI--MMYAKCGQVGYARKLF-DEITERDTVSWNSMISGYSE 206
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+ ++A+ +F M+ G +P E T +L AC+ + L G ++ + +
Sbjct: 207 AGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFL 266
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
+ L+ YG C A +VF+ M ++ V+W +ITV +N EA F +M+ G
Sbjct: 267 GSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGV 326
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
PD T+ VLSAC +G L LGK + E N + T L+DMY KCG V A
Sbjct: 327 SPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALR 386
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
+F M N TW+AMI A G+A+EAL LF M S+ P+ +TF+GVL AC HAG+
Sbjct: 387 VFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGL 443
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALL 406
V G RYFHEM + G+ P HY + D+L+RAG L EA+ F+ P +P+ I+L A+L
Sbjct: 444 VHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAIL 503
Query: 407 SASSIHDAKYQD-GVGNEVRRRLLEL-EPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKN 464
A K +D + + R L+E+ E + + N VI +N A++ MW++ + +R M++
Sbjct: 504 GACH----KRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRD 559
Query: 465 VGLKKMKGMSWVELGGSIHRFYSGYD 490
G+ K G SW+E+ G + F +G D
Sbjct: 560 RGVVKTPGCSWIEIEGELMEFLAGSD 585
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 129/412 (31%), Positives = 205/412 (49%), Gaps = 40/412 (9%)
Query: 29 RQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
R L LK C S L QI AQ+ + ++ ++ + V + S S L +
Sbjct: 34 RDFLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYS-------SFLFSV 86
Query: 89 VNDSVPIPWNNLIRGYA--WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
+ +N +IRG W+D A+ ++ MK G+KP +FTY FV ACA++ +
Sbjct: 87 TEEPNHYSFNYMIRGLTNTWNDH-EAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIG 145
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G V +++ K GL+ DV+ N++L+ Y C + A K+FD++ ER VSWN +I+
Sbjct: 146 VGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYS 205
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
E + +A+ F KM++ GFEPDE T++ +L AC+ LG+L G+ + I + L+
Sbjct: 206 EAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTF 265
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
LG+ LI MY KCG + AR +F++M + + W+AMI +Q+G + EA +LF M+ +
Sbjct: 266 LGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTG 325
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYR---YFHEMEHVHGI-----------------KPM 366
+SP+ T VL AC G +E G + + E+ H I + +
Sbjct: 326 VSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEAL 385
Query: 367 RIH----------YHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
R+ ++ M A GH KEA M P+ I +LSA
Sbjct: 386 RVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSDITFIGVLSA 437
>gi|296087773|emb|CBI35029.3| unnamed protein product [Vitis vinifera]
Length = 1596
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 166/487 (34%), Positives = 253/487 (51%), Gaps = 10/487 (2%)
Query: 29 RQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
++C+S + C + + IHA V+GL + + +L+ FC LS+S +L+YA I
Sbjct: 5 KRCISLAQSCSNMRQFKAIHALFIVNGLHLNNYAISKLISFCALSNSGSLSYASLIFSQI 64
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVF-IDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
N ++ +N LIR Y+ S P+ A+ F + + + P + T+PF++ AC +
Sbjct: 65 QNPNL-FAYNTLIRAYSRSSTPQLALHYFQLMLDDENVGPDQHTFPFIISACTNSLWMLL 123
Query: 148 GMQVQANVTKSGL-DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G Q+ V K+G+ SD + LVRFY C DA K+FD++ VV WNV++ V
Sbjct: 124 GKQIHNWVLKNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNLDVVQWNVLLNGYV 183
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNC 265
EA+ F M G EPDE + L C +LG L GKW+H + +R + +
Sbjct: 184 RRGLAPEALNAFRNMLVSGVEPDEFCLTTALKGCAQLGALQQGKWIHEYVTKRKWLEADV 243
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK-N 324
+GTAL+DMYAKCG + + +F M + NV++WSAMI G A HG+ +A++ M+
Sbjct: 244 FIGTALVDMYAKCGCIDRSVEVFEGMTKRNVFSWSAMIGGFALHGHVRKAMQCLERMQVE 303
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ P+ V LGV+ AC HAG+ E+G ME +GI P HY M D+L RAG L
Sbjct: 304 DGLRPDGVVLLGVIMACAHAGLQEEGQFLLENMEARYGILPKHEHYSCMVDLLCRAGQLD 363
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQN---LVI 441
EA I MP +P V ALLS H+ D R L+ G++ V
Sbjct: 364 EALKLIRRMPMKPRAAVWGALLSGCRTHNNV--DLAELAARELLMVGNGDGTEEDGAYVQ 421
Query: 442 VANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQI 501
++N Y E +RR + + +K G S +E+ G +++F SG S LA I+++
Sbjct: 422 LSNIYLAAQKCEDACRIRRMIGDKRIKTKPGCSLIEVEGEVNQFVSGDISHPCLAQIHEM 481
Query: 502 LETLNLH 508
L+ ++L
Sbjct: 482 LDLVSLQ 488
>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial [Vitis vinifera]
gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 158/416 (37%), Positives = 222/416 (53%), Gaps = 3/416 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN++I GYA ++ +AV F M G + T +L +C + L G + A+
Sbjct: 224 VSWNSMIAGYAHFEQCSKAVGFFKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAH 283
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ G DSD+ N L+ Y C A +FD+M ++ VSW +I E L EA
Sbjct: 284 GIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEA 343
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F M+ +G +PD T++ ++S C + G L LGKW+ G N + ALID+
Sbjct: 344 MTLFSAMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDV 403
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG++ AR LF M E ++ +W+ +I G A +G +EAL LF M + PN++TF
Sbjct: 404 YAKCGSMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITF 463
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
L VL ACNHAG +E G+ F+ M V+ I P HY MAD+L R G LKEA+ FI NMP
Sbjct: 464 LAVLQACNHAGFLEKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMP 523
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
F+P+ + LLSA IH +G V L ELEP+ + V +AN YA G W++
Sbjct: 524 FKPDVGIWSVLLSACKIHQNVV---IGECVAYHLFELEPQTAVPYVQMANIYASAGKWDR 580
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
V+ +R MK K G S V++ G H F E IY+ LE L L MK
Sbjct: 581 VAAIRTMMKCNKAMKSPGKSLVQVNGKTHEFTVEDRCHPEGLLIYETLENLALQMK 636
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 123/270 (45%), Gaps = 7/270 (2%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN+ I +A+ +F MK+ G++P T+P V KAC+++ L V +V
Sbjct: 22 WNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVHTHVV 81
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
KS +D++ ++V Y C + A +F M +R V SWN +I + ++ V
Sbjct: 82 KSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILGFAQLGFVDRVVS 141
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F +M G D T++ + + L +L + + +H I+ G + + I YA
Sbjct: 142 LFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAAYA 201
Query: 277 KCGAVGCARLLFSRMEE--INVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
KCG G A +F +++ +W++MI G A +A+ F M + T
Sbjct: 202 KCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKMLCGGFRADLSTI 261
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIK 364
L +L +C V+ + ++ H HGI+
Sbjct: 262 LSLLSSC-----VQPEVLFHGKLIHAHGIQ 286
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 80/144 (55%)
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
+V WN IT V + +A+ F +MK G EP+ T V AC++L NL + VH
Sbjct: 18 TVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVH 77
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
+++ + + T+++DMY KC +G A LFSRM + +V +W++MILG AQ G+ +
Sbjct: 78 THVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILGFAQLGFVD 137
Query: 314 EALELFSNMKNSSISPNYVTFLGV 337
+ LF M I + VT +G+
Sbjct: 138 RVVSLFCEMGIEGIRADSVTVIGL 161
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 246/483 (50%), Gaps = 22/483 (4%)
Query: 35 LKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP 94
+K C + +IH + GL+ D I LV C L + +A+ + +P
Sbjct: 66 IKACLDVLEIKKIHGLLFKFGLELDVFIGSALVN-CYLKFGL-MEHAQVAF-----EELP 118
Query: 95 IP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
I WN ++ GYA + + F M + P+ FT +L A + LN G
Sbjct: 119 IRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRI 178
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+ K G DS V +N+L+ YG C+ DA ++F+ M E+ + SWN I +V +
Sbjct: 179 IHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGD 238
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG------TVLN 264
+ +M G +PD T+ VL AC+ L L G+ +H +I G + +
Sbjct: 239 HDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDD 298
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
L A+IDMYAKCG++ A L+F RM +V +W+ MI+G HGY EALE+FS M
Sbjct: 299 VLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCE 358
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ P+ VTF+GVL AC+HAG V G + +M+ + + P HY + D+L RAG L
Sbjct: 359 VQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLD 418
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEV-RRRLLELEPRGSQNLVIVA 443
EAY + MP + NP+V RALL+A +H + V EV +R+ ELEP + V+++
Sbjct: 419 EAYELALTMPIEANPVVWRALLAACRLH----KHAVLAEVAAQRVFELEPEHCGSYVLMS 474
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N Y VG +E+V VR M+ ++K G SW+EL +H F S + E IY L
Sbjct: 475 NVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAYSIYAGLN 534
Query: 504 TLN 506
+L
Sbjct: 535 SLT 537
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 148/327 (45%), Gaps = 10/327 (3%)
Query: 73 SSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
S + +A SI + ++ +N +I G+ + P E + M+ G+ P +FT+
Sbjct: 3 SKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTF 62
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
P +KAC ++ E ++ + K GL+ DV+ + LV Y A F+++
Sbjct: 63 PCAIKACLDVL---EIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPI 119
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
R VV WN ++ + + F +M D P T+ +LS +G+L+ G+ +
Sbjct: 120 RDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRII 179
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H ++ G + +LIDMY KC + A +F M E ++++W+++ Q G
Sbjct: 180 HGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDH 239
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR----- 367
+ L L M + I P+ VT VL AC+H + G R H V G+
Sbjct: 240 DGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHG-REIHGYMIVSGLGKDGKDIDD 298
Query: 368 -IHYHTMADILARAGHLKEAYTFIMNM 393
+ + + D+ A+ G +++A+ M
Sbjct: 299 VLLKNAVIDMYAKCGSMRDAHLVFERM 325
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 274 MYAKCGAVGCARLLFSR-MEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
MY+KC + A +FS EINV+ ++A+I G +G+ EE E + M+N + P+
Sbjct: 1 MYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKF 60
Query: 333 TFLGVLCAC 341
TF + AC
Sbjct: 61 TFPCAIKAC 69
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 163/483 (33%), Positives = 253/483 (52%), Gaps = 15/483 (3%)
Query: 15 PKP---SNCNSDLLSK--ARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRF 69
PKP SN N L +Q +S L+ + IHAQ+ +G D ++ EL+R
Sbjct: 14 PKPHPNSNSNPKSLKSLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRS 73
Query: 70 CTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTE 129
C S + YA I Y ++ + LI G+ S +A+ ++ M I P
Sbjct: 74 C--SKCHAIDYASRIF-QYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDN 130
Query: 130 FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD 189
+ +LKAC L EG +V + K GL S+ ++ YG C DA +VF++
Sbjct: 131 YLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEE 190
Query: 190 MCE----RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGN 245
M E + V W +I V N + A+ F M+ P+E T++ VLSAC++LG
Sbjct: 191 MPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGA 250
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
L +G+WVH + + LN +G ALI+MY++CG++ A+ +F M++ +V T++ MI G
Sbjct: 251 LEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISG 310
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKP 365
L+ +G + +A+ELF M + P VTF+GVL AC+H G+V+ G++ FH M +G++P
Sbjct: 311 LSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEP 370
Query: 366 MRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVR 425
HY M D+L R G L+EAY I M P+ I+L LLSA +H +G +V
Sbjct: 371 QIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHK---NLELGEQVA 427
Query: 426 RRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRF 485
+ L + S V++++ YA G W++ + VR MK G++K G S +E+ IH F
Sbjct: 428 KVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEF 487
Query: 486 YSG 488
G
Sbjct: 488 LLG 490
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 140/415 (33%), Positives = 228/415 (54%), Gaps = 3/415 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I W ++I G+ + R+A+ +F +MK ++ ++T+ VL AC + L EG QV A
Sbjct: 241 ISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAY 300
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ ++ +++ + LV Y C+ + A VF M ++VVSW ++ +N + EA
Sbjct: 301 IIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEA 360
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
V F M+ G EPD+ T+ V+S+C L +L G H + + G + + AL+ +
Sbjct: 361 VKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTL 420
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y KCG++ + LF+ + + TW+A++ G AQ G A E + LF +M + P+ VTF
Sbjct: 421 YGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTF 480
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+GVL AC+ AG+VE G + F M + HGI P++ HY M D+ +RAG ++EA FI MP
Sbjct: 481 IGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMP 540
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
F P+ I LLS+ + +G L+EL+P + + V++++ YA G WE+
Sbjct: 541 FSPDAISWATLLSSCRFYGNM---DIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEE 597
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
V+ +R+ M++ GL+K G SW++ +H F + S IY LE LN M
Sbjct: 598 VARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKM 652
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 168/358 (46%), Gaps = 39/358 (10%)
Query: 88 YVNDSVP----IPWNNLIRGYAWSDRPREAVWVF-IDMKRRG-IKPTEFTYPFVLKACAE 141
Y+ D++P + WN+LI GYA ++V + + +K G T+ +L ++
Sbjct: 96 YLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASK 155
Query: 142 ISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYG-----SCRRK---------------- 180
+ G Q+ +V K G S V+ + LV Y SC RK
Sbjct: 156 RGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTL 215
Query: 181 ----------RDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDE 230
D+ ++F +M ER +SW +IT +N +A+ F +MK + D+
Sbjct: 216 IMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQ 275
Query: 231 TTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSR 290
T VL+AC + L GK VH +I N + +AL+DMY KC + A +F +
Sbjct: 276 YTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKK 335
Query: 291 MEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
M NV +W+AM++G Q+GY+EEA++ FS+M+ I P+ T V+ +C + +E+G
Sbjct: 336 MTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEG 395
Query: 351 YRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
+ FH G+ + + + + G +++++ + F+ + + AL+S
Sbjct: 396 AQ-FHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFK-DEVTWTALVSG 451
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 140/314 (44%), Gaps = 47/314 (14%)
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
Y +LK C E + + +++ K+ + + NNL+ Y ACKVFD M
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71
Query: 192 ERSVVSWNVIITV------CVENLWLGEAV--------------------------GYFV 219
++ SWN I++ E +L +A+ Y +
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131
Query: 220 KMKDLG-FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
+K+ G F + T +L ++ G + LG+ +H +++ G + +G+ L+DMY+K
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
G + CAR +F + E NV ++ +I+GL + G E++ LF M+ + +++ ++
Sbjct: 192 GMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRER----DSISWTSMI 247
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL------KEAYTFIMN 392
G+ D F EM+ ++ +++ +T +L G + K+ + +I+
Sbjct: 248 TGFTQNGLDRDAIDIFREMK----LENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIR 303
Query: 393 MPFQPNPIVLRALL 406
++ N V AL+
Sbjct: 304 TDYKDNIFVASALV 317
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 62/226 (27%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDS----------VPI 95
Q HA+ SGL + F T+S++ Y + C + DS +
Sbjct: 397 QFHARALTSGL----------ISFITVSNALVTLYGK---CGSIEDSHRLFNEISFKDEV 443
Query: 96 PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV-QAN 154
W L+ GYA + E + +F M G+KP + T+ VL AC+ + +G Q+ ++
Sbjct: 444 TWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESM 503
Query: 155 VTKSGL--DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
+ + G+ D YT C + D+ R+ +
Sbjct: 504 INEHGIVPIQDHYT-----------------CMI--DLFSRAGR--------------IE 530
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
EA + KM F PD + +LS+C GN+ +GKW L+E
Sbjct: 531 EARNFINKMP---FSPDAISWATLLSSCRFYGNMDIGKWAAEFLME 573
>gi|242080213|ref|XP_002444875.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
gi|241941225|gb|EES14370.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
Length = 583
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 167/463 (36%), Positives = 235/463 (50%), Gaps = 7/463 (1%)
Query: 44 LYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRG 103
L Q HA++ VSG A L + TL+ + +L + +L R
Sbjct: 26 LKQAHARLVVSG---HAHSLPLTTKLATLAVAAGAASYAGLLAASHPSPDSFLFCSLTRA 82
Query: 104 YAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD 163
A P A+ + + + + F + V KACA++S L GM V A+ G SD
Sbjct: 83 AARRGLPAAALAFYRRLLAAALPFSSFAFTSVAKACADLSALRAGMGVHAHAVLLGFGSD 142
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
+ LV Y C + A K+FD + +RSVV+WN +I+ +N G A+ + +M+
Sbjct: 143 RFVQTALVVLYSKCGKLDVARKLFDAIRDRSVVAWNAMISGYEQNGLAGRAIEVYREMRV 202
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G PD T + LSAC + G L LG V ++ +N LG AL++MYA+CG V
Sbjct: 203 AGEAPDSATFVATLSACAQAGALDLGHEVERLIVSERMEMNVVLGAALVNMYARCGLVNK 262
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
AR F ++E NV TW++MI G HG+ EA++LF M+ PN VTF+ VL AC H
Sbjct: 263 AREWFDMLQERNVVTWTSMIAGYGMHGHGGEAVKLFDLMRQQGPPPNDVTFVAVLSACAH 322
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN-MPFQPNPIVL 402
AG+V DG F M+ V+G+ P HY +M D+ RAG L +A FI + +P +P P V
Sbjct: 323 AGLVSDGRDAFASMKSVYGLVPRAEHYCSMVDMYGRAGLLDDAMQFIHDSIPGEPGPEVW 382
Query: 403 RALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFM 462
A+L A +H +G EV RL+ LEP + V+++N YA G V VR M
Sbjct: 383 TAMLGACKMHK---NFSLGVEVAERLIALEPENPSHRVLLSNIYALSGKMNHVEKVRNTM 439
Query: 463 KNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
LKK G S +E+GG H F G S + IYQ LE L
Sbjct: 440 IKRRLKKPIGYSLIEIGGVAHVFRMGEKSHPKTPEIYQYLEKL 482
>gi|334184678|ref|NP_180987.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546770|sp|O64705.2|PP184_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g34400
gi|330253874|gb|AEC08968.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 152/446 (34%), Positives = 238/446 (53%), Gaps = 12/446 (2%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H+ + GL+ D I L+ + + YAR + + + + + WN++I GY+
Sbjct: 154 VHSSLFKVGLERDVHINHSLI--MMYAKCGQVGYARKLF-DEITERDTVSWNSMISGYSE 210
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+ ++A+ +F M+ G +P E T +L AC+ + L G ++ + +
Sbjct: 211 AGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFL 270
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
+ L+ YG C A +VF+ M ++ V+W +ITV +N EA F +M+ G
Sbjct: 271 GSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGV 330
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
PD T+ VLSAC +G L LGK + E N + T L+DMY KCG V A
Sbjct: 331 SPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALR 390
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
+F M N TW+AMI A G+A+EAL LF M S+ P+ +TF+GVL AC HAG+
Sbjct: 391 VFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGL 447
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALL 406
V G RYFHEM + G+ P HY + D+L+RAG L EA+ F+ P +P+ I+L A+L
Sbjct: 448 VHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAIL 507
Query: 407 SASSIHDAKYQD-GVGNEVRRRLLEL-EPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKN 464
A K +D + + R L+E+ E + + N VI +N A++ MW++ + +R M++
Sbjct: 508 GACH----KRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRD 563
Query: 465 VGLKKMKGMSWVELGGSIHRFYSGYD 490
G+ K G SW+E+ G + F +G D
Sbjct: 564 RGVVKTPGCSWIEIEGELMEFLAGSD 589
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 129/412 (31%), Positives = 205/412 (49%), Gaps = 40/412 (9%)
Query: 29 RQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
R L LK C S L QI AQ+ + ++ ++ + V + S S L +
Sbjct: 38 RDFLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYS-------SFLFSV 90
Query: 89 VNDSVPIPWNNLIRGYA--WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
+ +N +IRG W+D A+ ++ MK G+KP +FTY FV ACA++ +
Sbjct: 91 TEEPNHYSFNYMIRGLTNTWNDH-EAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIG 149
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G V +++ K GL+ DV+ N++L+ Y C + A K+FD++ ER VSWN +I+
Sbjct: 150 VGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYS 209
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
E + +A+ F KM++ GFEPDE T++ +L AC+ LG+L G+ + I + L+
Sbjct: 210 EAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTF 269
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
LG+ LI MY KCG + AR +F++M + + W+AMI +Q+G + EA +LF M+ +
Sbjct: 270 LGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTG 329
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYR---YFHEMEHVHGI-----------------KPM 366
+SP+ T VL AC G +E G + + E+ H I + +
Sbjct: 330 VSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEAL 389
Query: 367 RIH----------YHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
R+ ++ M A GH KEA M P+ I +LSA
Sbjct: 390 RVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSDITFIGVLSA 441
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 136/364 (37%), Positives = 216/364 (59%), Gaps = 4/364 (1%)
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G + + V +SG S +Y N+L+ Y +C A KVFD M E+ +V+WN +I E
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
N EA+ + +M G +PD T++ +LSAC ++G L+LGK VH+ +I+ G N
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS- 326
L+D+YA+CG V A+ LF M + N +W+++I+GLA +G+ +EA+ELF M+++
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+ P +TF+G+L AC+H GMV++G+ YF M + I+P H+ M D+LARAG +K+A
Sbjct: 187 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 246
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKY 446
Y +I +MP QPN ++ R LL A ++H + R ++L+LEP S + V+++N Y
Sbjct: 247 YEYIKSMPMQPNVVIWRTLLGACTVHG---DSDLAEFARIQILQLEPNHSGDYVLLSNMY 303
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
A W V +R+ M G+KK+ G S VE+G +H F G S + IY L+ +
Sbjct: 304 ASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMT 363
Query: 507 LHMK 510
++
Sbjct: 364 GRLR 367
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 126/250 (50%), Gaps = 9/250 (3%)
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D +P + WN++I G+A + +P EA+ ++ +M +GIKP FT +L ACA+I
Sbjct: 45 VFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGA 104
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L G +V + K GL +++++N L+ Y C R +A +FD+M +++ VSW +I
Sbjct: 105 LTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG 164
Query: 205 CVENLWLGEAVGYFVKMKDL-GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV- 262
N + EA+ F M+ G P E T + +L AC+ G + G ++ E +
Sbjct: 165 LAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIE 224
Query: 263 LNCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEALELFSN 321
+ ++D+ A+ G V A M + NV W ++ HG ++ L F+
Sbjct: 225 PRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFAR 282
Query: 322 MKNSSISPNY 331
++ + PN+
Sbjct: 283 IQILQLEPNH 292
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 9/155 (5%)
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
+ ++ LG+ +H +I G + +L+ +YA CG V A +F +M E ++ W+++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
I G A++G EEAL L++ M + I P+ T + +L AC G + G R HV+
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRV-----HVYM 115
Query: 363 IK---PMRIH-YHTMADILARAGHLKEAYTFIMNM 393
IK +H + + D+ AR G ++EA T M
Sbjct: 116 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 150
>gi|449446363|ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 163/486 (33%), Positives = 259/486 (53%), Gaps = 12/486 (2%)
Query: 34 FLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSV 93
L+ C S + Q+ A + ++G + + +L+ C +SS +L+YA I Y+
Sbjct: 7 LLQKCSSFSQIKQLQANLIINGDFHFSSSRTKLLELCAISSFGDLSYALHIF-RYIPYPS 65
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMK-RRGIKPTE-FTYPFVLKACAEISGLNEGMQV 151
WN +IRG A S P AV+ + M G+ + T F LKACA +E +Q+
Sbjct: 66 TNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSFALKACARALARSEAIQL 125
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
+ + + G ++DV L+ Y A K+FD+M + + SWN +I +
Sbjct: 126 HSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGSRP 185
Query: 212 GEAVGYFVKMK-DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
+A+ F +MK D P+ T+ L AC++LG L G+ VH ++E N Q+
Sbjct: 186 ADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLNSNVQVCNV 245
Query: 271 LIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
+IDMYAKCG++ A +F M + ++ TW+ MI+ A HG +AL+LF + S +SP
Sbjct: 246 VIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSP 305
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
+ V++L VLCACNHAG+VEDG + F+ M G++P HY +M D+L RAG LKEAY
Sbjct: 306 DAVSYLAVLCACNHAGLVEDGLKLFNSMTQ-RGLEPNIKHYGSMVDLLGRAGRLKEAYDI 364
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEV-RRRLLELEPRGSQNLVIVANKYAE 448
+ ++PF PN ++ + LL A Y D E+ R+L+E+ + V+++N YA
Sbjct: 365 VSSLPF-PNMVLWQTLLGACRT----YGDVEMAELASRKLVEMGFISCGDFVLLSNVYAA 419
Query: 449 VGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLH 508
W+ V VR M+ +KK G S++E+ G +++F +G S IY L+ +NL
Sbjct: 420 RQRWDDVGRVRDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLR 479
Query: 509 MKVLNF 514
+K +
Sbjct: 480 IKAYGY 485
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 187/540 (34%), Positives = 274/540 (50%), Gaps = 44/540 (8%)
Query: 1 MVRFPVPTTNHIFP-PKPSNCNSDLLSKARQCLSFL-KLCCSKKHLYQIHAQIQVSGLQN 58
M+ PVPT P P S+ +S+L R +S L K + KH+ IH +
Sbjct: 1 MIISPVPTIIANLPNPHSSSHDSNL---RRVIISLLHKNRKNPKHVQSIHCHAIKTRTSQ 57
Query: 59 DAQILKELVR-FCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVF 117
D + EL+R +C ++ + +A + N +V + + +LI G+ +A+ +F
Sbjct: 58 DPFVAFELLRVYCKVNY---IDHAIKLFRCTQNPNVYL-YTSLIDGFVSFGSYTDAINLF 113
Query: 118 IDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSC 177
M R+ + + +LKAC L G +V V KSGL D LV YG C
Sbjct: 114 CQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIALKLVELYGKC 173
Query: 178 RRKRDACKVFDDMCERSVVSWNVII-----------------------TVC--------V 206
DA K+FD M ER VV+ V+I TVC V
Sbjct: 174 GVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLV 233
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
N + F +M+ G EP+E T + VLSAC +LG L LG+W+H + + G +N
Sbjct: 234 RNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYMRKCGVEVNRF 293
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+ ALI+MY++CG + A+ LF + +V T+++MI GLA HG + EA+ELFS M
Sbjct: 294 VAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGGLALHGKSIEAVELFSEMLKER 353
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+ PN +TF+GVL AC+H G+V+ G F ME +HGI+P HY M DIL R G L+EA
Sbjct: 354 VRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGIEPEVEHYGCMVDILGRVGRLEEA 413
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKY 446
+ FI M + + +L +LLSA IH G+G +V + L E S + ++++N Y
Sbjct: 414 FDFIGRMGVEADDKMLCSLLSACKIHK---NIGMGEKVAKLLSEHYRIDSGSFIMLSNFY 470
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
A +G W + VR M+ G+ K G S +E+ +IH F+SG E IY+ LE LN
Sbjct: 471 ASLGRWSYAAEVREKMEKGGIIKEPGCSSIEVNNAIHEFFSGDLRHPERKRIYKKLEELN 530
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 149/416 (35%), Positives = 232/416 (55%), Gaps = 3/416 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
IPW+ +I YA S++ EA+ +F M+R + P +FT +L+ACA + L G Q+ +
Sbjct: 313 IPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCH 372
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V K GLD +V+ +N L+ Y C R ++ ++F + + VSWN +I V+ +A
Sbjct: 373 VVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKA 432
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F M + + E T VL AC + L G +H ++ N +G ALIDM
Sbjct: 433 LILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDM 492
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG + ARL+F + E + +W+AMI G + HG EAL+ F +M + P+ VTF
Sbjct: 493 YAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTF 552
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+G+L AC++AG+++ G YF M + I+P HY M +L R+GHL +A + +P
Sbjct: 553 VGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIP 612
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
F+P+ +V RALLSA IH+ +G +R+LE+EP V+++N YA W
Sbjct: 613 FEPSVMVWRALLSACVIHN---DVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGN 669
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
V+++R MK G++K G+SW+E G +H F G S + I +LE LN+ +
Sbjct: 670 VASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKAR 725
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 175/368 (47%), Gaps = 5/368 (1%)
Query: 45 YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGY 104
+ +HA + G +DA + L+ ++ AR + + + + W ++ Y
Sbjct: 165 FSVHACVYKLGFDSDAFVGTALIDCYSVCGYAEC--ARQVF-DAIEYKDMVSWTGMVACY 221
Query: 105 AWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDV 164
++ E++ +F M+ G KP FT+ VLKAC + N G V K+ ++
Sbjct: 222 VENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEEL 281
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL 224
+ L+ Y DA +VF++M + V+ W+ +I ++ EA+ F +M+
Sbjct: 282 FVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRG 341
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCA 284
P++ T+ +L AC L +L LG +H +++ G +N + AL+DMYAKCG + +
Sbjct: 342 LVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENS 401
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA 344
LFS +W+ +I+G Q G E+AL LF +M + VT+ VL AC
Sbjct: 402 LQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGI 461
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRA 404
+E G + H + + + + D+ A+ G++K+A + +M + + + A
Sbjct: 462 AALEPGSQ-IHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDA-RLVFDMLREHDQVSWNA 519
Query: 405 LLSASSIH 412
++S S+H
Sbjct: 520 MISGYSVH 527
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 143/308 (46%), Gaps = 9/308 (2%)
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
D + + LI+GY+ R EA+ +F ++ G + F + VLK G
Sbjct: 107 DRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFS 166
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
V A V K G DSD + L+ Y C A +VFD + + +VSW ++ VEN
Sbjct: 167 VHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENEC 226
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
E++ F +M+ +GF+P+ T VL AC L ++GK VH + + +G
Sbjct: 227 FEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVE 286
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
LID+Y K G V A +F M + +V WS MI AQ +EEA+E+F M+ + PN
Sbjct: 287 LIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPN 346
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIK---PMRIHY-HTMADILARAGHLKEA 386
T +L AC ++ G + H H +K M + + + D+ A+ G ++ +
Sbjct: 347 QFTLASLLQACASLVDLQLGNQI-----HCHVVKVGLDMNVFVSNALMDMYAKCGRMENS 401
Query: 387 YTFIMNMP 394
P
Sbjct: 402 LQLFSESP 409
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 124/271 (45%), Gaps = 13/271 (4%)
Query: 130 FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD 189
+ Y +L++C G + + K G D++ NN L+ FY DA K+FD+
Sbjct: 45 YIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDE 104
Query: 190 MCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
M +R+ VS+ +I + L EA+G F +++ G E + VL LG
Sbjct: 105 MPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLG 164
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
VH + + G + +GTALID Y+ CG CAR +F +E ++ +W+ M+ ++
Sbjct: 165 FSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVEN 224
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIH 369
EE+L+LFS M+ PN TF VL AC G F+ + VHG +
Sbjct: 225 ECFEESLKLFSRMRIVGFKPNNFTFASVLKACV-------GLEVFNVGKAVHGCAFKTSY 277
Query: 370 YH------TMADILARAGHLKEAYTFIMNMP 394
+ D+ ++G + +A MP
Sbjct: 278 LEELFVGVELIDLYIKSGDVDDALQVFEEMP 308
>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 157/464 (33%), Positives = 246/464 (53%), Gaps = 14/464 (3%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H I +GL+ D+ I L+ N+ A I ++ V I W +I G
Sbjct: 269 VHGHILRAGLEQDSHIETSLIGM--YLKCGNVNSAFRIFEGMMHKDV-ISWTAMISGLVQ 325
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+D AV VF M + + P+ T VL ACAE+ G V + + + D+ +
Sbjct: 326 NDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPS 385
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
N+LV Y C +C VFD M R +VSWN I++ +N L +A+ F +M+
Sbjct: 386 QNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQ 445
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL-GTALIDMYAKCGAVGCAR 285
PD T++ +L AC +G L GKW+H + + + C L TAL+DMY+KCG +G A+
Sbjct: 446 RPDSITVVSLLQACASIGALHQGKWIH-NFVTKSCLGPCILIDTALVDMYSKCGDLGSAQ 504
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
F RM + ++ +WS++I G HG E AL ++S+ ++ I PN+V +L +L AC+H G
Sbjct: 505 KCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNG 564
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+V+ G +FH M GI+P H + D+L+RAG ++EAY+F M +P+ VL L
Sbjct: 565 LVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGIL 624
Query: 406 LSASSIHDAKYQDG---VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFM 462
L DA G +G+ V R ++ L+P + N V +A+ YA + W+ V V M
Sbjct: 625 L------DACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYASMKRWDGVGEVWTQM 678
Query: 463 KNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
K++ LKK+ G S++EL G+I F++ + S + I + LN
Sbjct: 679 KSLHLKKLPGWSFIELHGTITTFFTDHSSHPQFEEIIDRVLLLN 722
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 155/302 (51%), Gaps = 1/302 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I WN+L+ GYA RE + + I MK GI+P + T+ ++ A A S L G V +
Sbjct: 213 ISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGH 272
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ ++GL+ D + +L+ Y C A ++F+ M + V+SW +I+ V+N A
Sbjct: 273 ILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMA 332
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
V F +M P T+ VL+AC ELG+ LG VH ++ + L+ +L+ M
Sbjct: 333 VTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTM 392
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG + + +F RM ++ +W+A++ G AQ+G+ +AL LF+ M+ + P+ +T
Sbjct: 393 YAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITV 452
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ +L AC G + G ++ H + P + + D+ ++ G L A MP
Sbjct: 453 VSLLQACASIGALHQG-KWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMP 511
Query: 395 FQ 396
Q
Sbjct: 512 QQ 513
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 183/400 (45%), Gaps = 36/400 (9%)
Query: 1 MVRFPVPTTNHIFPPKPSNCNS-DLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQND 59
M+ P H FP C S DL S LSF H ++ V G +D
Sbjct: 39 MLSTDTPPDAHTFPSLVKACTSLDLFSHG---LSF-------------HQRVIVDGYSSD 82
Query: 60 AQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFID 119
+ I L+ F S + AR + + ++D +PW +I Y + A ++
Sbjct: 83 SYIATSLINF--YSKFGHNQSARKVF-DTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNI 139
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M+R+GI+P+ T +L E+ L + A V + G SDV N+++ Y C R
Sbjct: 140 MRRQGIQPSSVTMLGLLSGVLELVHLQ---CLHACVIQYGFGSDVALANSMLNVYCKCGR 196
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
DA +F+ M R V+SWN +++ + + E + ++MK G EPD+ T ++SA
Sbjct: 197 VEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSA 256
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
L +GK VH ++ G + + T+LI MY KCG V A +F M +V +W
Sbjct: 257 AAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISW 316
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+AMI GL Q+ A+ A+ +F M S + P+ T VL AC G G
Sbjct: 317 TAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLG-------TS 369
Query: 360 VHG-IKPMRIHY-----HTMADILARAGHLKEAYTFIMNM 393
VHG I RI +++ + A+ GHL+++ + M
Sbjct: 370 VHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRM 409
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 129/318 (40%), Gaps = 49/318 (15%)
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
S+N II + + + M PD T ++ ACT L S G H ++
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
I G + + T+LI+ Y+K G AR +F M++ NV W+ MI + G + A
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134
Query: 317 ELFSNMKNSSISPNYVTFLGVLCA--------CNHA------------------------ 344
+++ M+ I P+ VT LG+L C HA
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKC 194
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP---FQPNPIV 401
G VED F M+ I ++++ A+ G+++E ++ M +P+
Sbjct: 195 GRVEDAQALFELMDARDVIS-----WNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQT 249
Query: 402 LRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRR- 460
+L+SA+++ + + GVG V +L ++ + + +GM+ K NV
Sbjct: 250 FGSLVSAAAM---QSKLGVGKMVHGHILRAGLEQDSHI-----ETSLIGMYLKCGNVNSA 301
Query: 461 FMKNVGLKKMKGMSWVEL 478
F G+ +SW +
Sbjct: 302 FRIFEGMMHKDVISWTAM 319
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 145/415 (34%), Positives = 226/415 (54%), Gaps = 11/415 (2%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN ++ GY S + + +F M ++G + +FT V K C + +N+G QV A
Sbjct: 483 VAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAY 542
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
KSG D D++ ++ ++ Y C A FD + V+W +I+ C+EN A
Sbjct: 543 AIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERA 602
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ----LGTA 270
F +M+ +G PDE T+ + A + L L G+ +H ++ LNC +GT+
Sbjct: 603 FHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALK----LNCTNDPFVGTS 658
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
L+DMYAKCG++ A LF R+E +N+ W+AM++GLAQHG +E L+LF MK+ I P+
Sbjct: 659 LVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPD 718
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
VTF+GVL AC+H+G+V + Y++ M +GIKP HY +AD L RAG +K+A I
Sbjct: 719 KVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLI 778
Query: 391 MNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVG 450
+M + + + R LL+A + G V +LLELEP S V+++N YA
Sbjct: 779 ESMSMEASASMYRTLLAACRVQG---DTETGKRVATKLLELEPLDSSAYVLLSNMYAAAS 835
Query: 451 MWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
W+++ R MK +KK G SW+E+ IH F S + IY+ ++ +
Sbjct: 836 KWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDM 890
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 158/344 (45%), Gaps = 8/344 (2%)
Query: 46 QIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGY 104
Q+H GL + L+ +C L + +AR++ N +++ I WN++I G
Sbjct: 336 QVHCMALKLGLDLMLTVSNSLINMYCKL---RKFGFARTVFDN-MSERDLISWNSVIAGI 391
Query: 105 AWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI-SGLNEGMQVQANVTKSGLDSD 163
A + EAV +F+ + R G+KP ++T VLKA + + GL+ QV + K SD
Sbjct: 392 AQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSD 451
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
+ + L+ Y R ++A +F+ +V+WN ++ ++ + + F M
Sbjct: 452 SFVSTALIDAYSRNRCMKEAEILFERH-NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHK 510
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G D+ T+ V C L ++ GK VH I+ G L+ + + ++DMY KCG +
Sbjct: 511 QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSA 570
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A+ F + + W+ MI G ++G E A +FS M+ + P+ T + A +
Sbjct: 571 AQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSC 630
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
+E G R H ++ D+ A+ G + +AY
Sbjct: 631 LTALEQG-RQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAY 673
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 119/273 (43%), Gaps = 42/273 (15%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN-EGMQVQ- 152
+ WN +++ Y EA+ + G+ P E T L+ A ISG + + QV+
Sbjct: 212 VLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT----LRLLARISGDDSDAGQVKS 267
Query: 153 -ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
AN + S++ N + Y + K F DM E V
Sbjct: 268 FANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDV---------------- 311
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
E D+ T +++L+ ++ +L+LG+ VH ++ G L + +L
Sbjct: 312 ---------------ECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSL 356
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
I+MY K G AR +F M E ++ +W+++I G+AQ+G EA+ LF + + P+
Sbjct: 357 INMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQ 416
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIK 364
T VL A A + +G ++ HVH IK
Sbjct: 417 YTMTSVLKA---ASSLPEGLSLSKQV-HVHAIK 445
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 9/174 (5%)
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV-------CVENLWLGEAVGYFVK 220
NNL+ Y C A +VFD M +R +VSWN I+ VEN+ +A F
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQ--QAFLLFRI 135
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
++ T+ +L C G + + H + G + + AL+++Y K G
Sbjct: 136 LRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGK 195
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
V ++LF M +V W+ M+ + G+ EEA++L S +S ++PN +T
Sbjct: 196 VKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 6/166 (3%)
Query: 73 SSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWS-----DRPREAVWVFIDMKRRGIKP 127
S +LTYAR + + + D + WN+++ YA S + ++A +F +++ +
Sbjct: 85 SKCGSLTYARRVF-DKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYT 143
Query: 128 TEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVF 187
+ T +LK C + K GLD D + LV Y + ++ +F
Sbjct: 144 SRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLF 203
Query: 188 DDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTM 233
++M R VV WN+++ +E + EA+ G P+E T+
Sbjct: 204 EEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
>gi|195651407|gb|ACG45171.1| CRR4 [Zea mays]
Length = 601
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 158/447 (35%), Positives = 238/447 (53%), Gaps = 22/447 (4%)
Query: 73 SSSKNLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPT 128
S S ++ AR + DS+P WN++I YA +EA+ +F M R G P
Sbjct: 155 SRSGDVEEARRLF-----DSMPRKTSASWNSMIACYAHGGEFQEALTLFDQMLREGASPN 209
Query: 129 EFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD 188
T V CA+ L G + +A V++ L +V + L+ Y CR +A + FD
Sbjct: 210 AITITTVFSICAKTGDLETGRRAKAWVSEEDL-QNVIVHTALMEMYVKCRAIDEARREFD 268
Query: 189 DMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSL 248
M R VV+W+ +I N E++ F +MK +P+E T++ VLSAC +LG+ L
Sbjct: 269 RMPRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDEL 328
Query: 249 GKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ 308
G+ + + + L LG+ALIDMY KCG V AR +F RME+ V W++MI GLA
Sbjct: 329 GEQIGSYIESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLAL 388
Query: 309 HGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM-EHVHGIKPMR 367
+G+AE+A+ L+ M + PN +TFL +L AC HAG+V+ G +F EM ++ P
Sbjct: 389 NGFAEDAIALYGEMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEMKKNKQHASPQV 448
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHD----AKYQDGVGNE 423
H + D+L ++G L EAY FI +M +PN ++ LLSA H AK G
Sbjct: 449 EHCACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWTTLLSACRAHADVELAKLAAG---- 504
Query: 424 VRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIH 483
+L+ LEP S V+++N YA+ G+W V +R M++ L+K+ SW+EL G +H
Sbjct: 505 ---KLVVLEPNSSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWIELDGEVH 561
Query: 484 RFYSGYDSQVELAGIYQILETLNLHMK 510
RF A IY +++ L L ++
Sbjct: 562 RFLVQDTYHPRSAEIYNVVDGLGLQLE 588
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 169/427 (39%), Gaps = 92/427 (21%)
Query: 61 QILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGY----AWSDRPREAVWV 116
++LK LS + AR + D+VP P L + + +E +
Sbjct: 11 RLLKTQPLHALLSDASTYRAARHLF-----DAVPRPTAALCCAFVSVLSKLSLHQELIEA 65
Query: 117 FIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFY-- 174
+ RRG P VLK+CA + +G Q + G+ DV+ LV FY
Sbjct: 66 VSSLHRRGGAIPSGCIPLVLKSCALSAASCQGTQTHCHALVRGMLGDVFVQTALVDFYAK 125
Query: 175 ---------------------------GSCRRK--RDACKVFDDMCERSVVSWNVIITVC 205
G R +A ++FD M ++ SWN +I
Sbjct: 126 NGNMDSAVMAFEEMPIKDPIPMNCLIIGYSRSGDVEEARRLFDSMPRKTSASWNSMIACY 185
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK----WVHLQLIERGT 261
EA+ F +M G P+ T+ V S C + G+L G+ WV + ++
Sbjct: 186 AHGGEFQEALTLFDQMLREGASPNAITITTVFSICAKTGDLETGRRAKAWVSEEDLQ--- 242
Query: 262 VLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSN 321
N + TAL++MY KC A+ AR F RM +V WS MI G + +G E+LELF
Sbjct: 243 --NVIVHTALMEMYVKCRAIDEARREFDRMPRRDVVAWSTMIAGYSHNGRPHESLELFER 300
Query: 322 MKNSSISPNYVTFLGVLCACNHAGMVEDGYR----------------------------- 352
MK ++ PN VT +GVL AC G E G +
Sbjct: 301 MKATNCKPNEVTLVGVLSACAQLGSDELGEQIGSYIESQTLPLTSYLGSALIDMYTKCGH 360
Query: 353 ------YFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA---YTFIMNMPFQPNPIVLR 403
FH ME + + I +++M LA G ++A Y ++ QPN I
Sbjct: 361 VARARDVFHRME-----QKVVIAWNSMIRGLALNGFAEDAIALYGEMVGDGVQPNEITFL 415
Query: 404 ALLSASS 410
ALL+A +
Sbjct: 416 ALLTACT 422
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 145/412 (35%), Positives = 222/412 (53%), Gaps = 9/412 (2%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN LI G A R +EA+ + +M R G P FT VL AE + + GM V
Sbjct: 136 VSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGY 195
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K+G D+DV+ ++L+ Y +C + + KVFD + V WN ++ +N + EA
Sbjct: 196 AIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEA 255
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+G F +M G P T ++ A L L LGK +H LI N + ++LIDM
Sbjct: 256 LGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDM 315
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y KCG V AR +F+ ++ ++ +W+AMI+G A HG EA LF M+ ++ PN++TF
Sbjct: 316 YCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITF 375
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
L VL AC+HAG+V++G++YF+ M + +G P H +AD L RAG L EAY FI M
Sbjct: 376 LAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMK 435
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
+P V LL A +H + EV +++ ELEP+ + VI++N Y+ G W +
Sbjct: 436 IKPTSSVWSTLLRACRVHKNTV---LAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNE 492
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRF------YSGYDSQVELAGIYQ 500
+ +R+ M+ G+KK SW+E+ +H F + YD ++ +Y
Sbjct: 493 AAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYS 544
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 126/280 (45%), Gaps = 24/280 (8%)
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKP---TEFTYPFVLKACAEISGLNEGMQ 150
P W IR A + A+ +F+ M R + P + P LK+CA +
Sbjct: 12 PPSWAYQIRMAASQGQFLHAISLFLQM-RASVAPRSSVPASLPAALKSCAGLGLCTLAAS 70
Query: 151 VQANVTKSGLDSDVYTNNNLVRF----------YGSCRRKRDAC----------KVFDDM 190
+ A +SG +D +T N L+ +G+ + KVFD+M
Sbjct: 71 LHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEM 130
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
ER VSWN +I C E+ EA+ +M GF PD T+ VL E ++ G
Sbjct: 131 LERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGM 190
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
VH I+ G + +G++LIDMYA C + + +F + + W++M+ G AQ+G
Sbjct: 191 VVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNG 250
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
EEAL +F M + + P VTF ++ A + ++ G
Sbjct: 251 SVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLG 290
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 126/280 (45%), Gaps = 5/280 (1%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
L C K +H +G ND + L+ ++ + Y+ + ++ +D
Sbjct: 177 LPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDM--YANCTQMDYSMKVFDSF-SD 233
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
+ WN+++ GYA + EA+ +F M + G++P T+ ++ A +S L G Q+
Sbjct: 234 CDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQL 293
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
A + ++ + +++ +++L+ Y C A +VF+ + +VSW +I +
Sbjct: 294 HAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPT 353
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG-KWVHLQLIERGTVLNCQLGTA 270
EA F +M+ +P+ T L VL+AC+ G + G K+ + + G V + + A
Sbjct: 354 TEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAA 413
Query: 271 LIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQH 309
L D + G + A S M+ + WS ++ H
Sbjct: 414 LADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVH 453
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 246/483 (50%), Gaps = 22/483 (4%)
Query: 35 LKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP 94
+K C + +IH + GL+ D I LV C L + +A+ + +P
Sbjct: 146 IKACLDVLEIKKIHGLLFKFGLELDVFIGSALVN-CYLKFGL-MEHAQVAF-----EELP 198
Query: 95 IP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
I WN ++ GYA + + F M + P+ FT L A + LN G
Sbjct: 199 IRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRI 258
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+ K G DS V +N+L+ YG C+ DA ++F+ M E+ + SWN I++V +
Sbjct: 259 IHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGD 318
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG------TVLN 264
+ +M G +PD T+ VL AC+ L L G+ +H +I G + +
Sbjct: 319 HDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDD 378
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
L A+IDMYAKCG++ A L+F RM +V +W+ MI+G HGY EALE+FS M
Sbjct: 379 VLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCE 438
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ P+ VTF+GVL AC+HAG V G + +M+ + + P HY + D+L RAG L
Sbjct: 439 VQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLD 498
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEV-RRRLLELEPRGSQNLVIVA 443
EAY + MP + NP+V RALL+A +H + V EV +R+ ELEP + V+++
Sbjct: 499 EAYELALTMPIEANPVVWRALLAACRLH----KHAVLAEVAAQRVFELEPEHCGSYVLMS 554
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N Y VG +E+V VR M+ ++K G SW+EL +H F S + E IY L
Sbjct: 555 NVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAXSIYAGLN 614
Query: 504 TLN 506
+L
Sbjct: 615 SLT 617
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 139/303 (45%), Gaps = 10/303 (3%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
+N +I G+ + P E + M+ G+ P +FT+P +KAC ++ E ++ +
Sbjct: 107 FNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVL---EIKKIHGLLF 163
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
K GL+ DV+ + LV Y A F+++ R VV WN ++ + +
Sbjct: 164 KFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLE 223
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F +M D P T+ LS +G+L+ G+ +H ++ G + +LIDMY
Sbjct: 224 TFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYG 283
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KC + A +F M E ++++W++++ Q G + L L M + I P+ VT
Sbjct: 284 KCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTT 343
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMR------IHYHTMADILARAGHLKEAYTFI 390
VL AC+H + G R H V G+ + + + D+ A+ G +++A+
Sbjct: 344 VLPACSHLAALMHG-REIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVF 402
Query: 391 MNM 393
M
Sbjct: 403 ERM 405
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 4/168 (2%)
Query: 188 DDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLS 247
D E +V ++N II+ + N + E ++ KM++ G PD+ T + AC ++ +
Sbjct: 97 DPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEI- 155
Query: 248 LGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA 307
K +H L + G L+ +G+AL++ Y K G + A++ F + +V W+AM+ G A
Sbjct: 156 --KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYA 213
Query: 308 QHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
Q G E LE F M + S+ P+ T G L G + +G R H
Sbjct: 214 QIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNG-RIIH 260
>gi|226530385|ref|NP_001145846.1| CRR4 [Zea mays]
gi|219884683|gb|ACL52716.1| unknown [Zea mays]
gi|414878658|tpg|DAA55789.1| TPA: CRR4 [Zea mays]
Length = 601
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 158/447 (35%), Positives = 238/447 (53%), Gaps = 22/447 (4%)
Query: 73 SSSKNLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPT 128
S S ++ AR + DS+P WN++I YA +EA+ +F M R G P
Sbjct: 155 SRSGDVEEARRLF-----DSMPRKTSASWNSMIACYAHGGEFQEALTLFDQMLREGASPN 209
Query: 129 EFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD 188
T V CA+ L G + +A V++ L +V + L+ Y CR +A + FD
Sbjct: 210 AITITTVFSICAKTGDLETGRRAKAWVSEEDL-QNVIVHTALMEMYVKCRAIDEARREFD 268
Query: 189 DMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSL 248
M R VV+W+ +I N E++ F +MK +P+E T++ VLSAC +LG+ L
Sbjct: 269 RMPRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDEL 328
Query: 249 GKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ 308
G+ + + + L LG+ALIDMY KCG V AR +F RME+ V W++MI GLA
Sbjct: 329 GEQIGSYIESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLAL 388
Query: 309 HGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM-EHVHGIKPMR 367
+G+AE+A+ L+ M + PN +TFL +L AC HAG+V+ G +F EM ++ P
Sbjct: 389 NGFAEDAIALYGEMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEMKKNKQHASPQV 448
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHD----AKYQDGVGNE 423
H + D+L ++G L EAY FI +M +PN ++ LLSA H AK G
Sbjct: 449 EHCACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWTTLLSACRAHADVELAKLAAG---- 504
Query: 424 VRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIH 483
+L+ LEP S V+++N YA+ G+W V +R M++ L+K+ SW+EL G +H
Sbjct: 505 ---KLVVLEPNSSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWIELDGEVH 561
Query: 484 RFYSGYDSQVELAGIYQILETLNLHMK 510
RF A IY +++ L L ++
Sbjct: 562 RFLVQDTYHPRSAEIYNVVDGLGLQLE 588
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 151/373 (40%), Gaps = 83/373 (22%)
Query: 111 REAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNL 170
+E + + RRG P VLK+CA + +G Q + G+ DV+ L
Sbjct: 60 QELIEAVSSLHRRGGAIPSGCIPLVLKSCALSAASCQGTQTHCHALVRGMLGDVFVQTAL 119
Query: 171 VRFY-----------------------------GSCRRK--RDACKVFDDMCERSVVSWN 199
V FY G R +A ++FD M ++ SWN
Sbjct: 120 VDFYAKNGNMDSAVMAFEEMPIKDPIPMNCLITGYSRSGDVEEARRLFDSMPRKTSASWN 179
Query: 200 VIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK----WVHLQ 255
+I EA+ F +M G P+ T+ V S C + G+L G+ WV +
Sbjct: 180 SMIACYAHGGEFQEALTLFDQMLREGASPNAITITTVFSICAKTGDLETGRRAKAWVSEE 239
Query: 256 LIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEA 315
++ N + TAL++MY KC A+ AR F RM +V WS MI G + +G E+
Sbjct: 240 DLQ-----NVIVHTALMEMYVKCRAIDEARREFDRMPRRDVVAWSTMIAGYSHNGRPHES 294
Query: 316 LELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR----------------------- 352
LELF MK ++ PN VT +GVL AC G E G +
Sbjct: 295 LELFERMKATNCKPNEVTLVGVLSACAQLGSDELGEQIGSYIESQTLPLTSYLGSALIDM 354
Query: 353 ------------YFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA---YTFIMNMPFQP 397
FH ME + + I +++M LA G ++A Y ++ QP
Sbjct: 355 YTKCGHVARARDVFHRME-----QKVVIAWNSMIRGLALNGFAEDAIALYGEMVGDGVQP 409
Query: 398 NPIVLRALLSASS 410
N I ALL+A +
Sbjct: 410 NEITFLALLTACT 422
>gi|356571125|ref|XP_003553731.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g05240-like [Glycine max]
Length = 552
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 164/459 (35%), Positives = 246/459 (53%), Gaps = 25/459 (5%)
Query: 35 LKLCCS---KKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LK CC+ + IH I SG + DA L+ S ++ + D
Sbjct: 100 LKACCAIADQDCGKCIHCCIVKSGFEADAYTATGLLHMYV--SCADMKSGLKVF-----D 152
Query: 92 SVPI----PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
++PI W LI GY +++P EA+ VF DM G++P E T L CA +
Sbjct: 153 NIPIWNVVAWTCLIAGYVNNNQPYEALKVFKDMSHCGVEPNEITMVNALIXCARSRDFDT 212
Query: 148 GMQVQANVTKSGLDSDVYTNNN-------LVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
G V ++ K+G D + T+N+ ++ Y C + A +F+ M +R++VSWN
Sbjct: 213 GQWVHQHIRKAGYDPFMSTSNSNIILATAILEMYAKCGSFKIARDLFNKMPQRNIVSWNS 272
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
+I + EA+ F M G PD+ T L VLS C L L+LG+ VH L + G
Sbjct: 273 MINAYNQYERHKEALDLFFDMWTSGIYPDKATFLSVLSVCAHLCALALGQTVHAYLXKTG 332
Query: 261 TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS 320
+ L TAL+DMYAK G +G A+ +FS +++ +V W++MI GLA HG EAL +F
Sbjct: 333 IGTDISLATALLDMYAKTGGLGSAQKIFSSLQKRDVVMWTSMINGLAMHGDGNEALGMFQ 392
Query: 321 NM-KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILAR 379
M ++SS+ P+++T++GVL AC+H G+VE+ ++F M ++ I P R HY M D+L+R
Sbjct: 393 TMHEDSSLVPDHITYIGVLFACSHVGLVEEAKKHFRLMTEMYSIVPGREHYGCMVDLLSR 452
Query: 380 AGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNL 439
+GH EA + M QPN + ALL IH+ V N+V+ RL ELE S
Sbjct: 453 SGHFGEAERLMETMAIQPNISIXGALLYGCQIHE---NLXVANQVKERLTELESCQSGAH 509
Query: 440 VIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVEL 478
V+++N YA+ G WE V+ R+ MK+ + K+ G S VE+
Sbjct: 510 VLLSNIYAKAGRWEDVNGTRKVMKHKRITKIIGHSSVEM 548
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 166/319 (52%), Gaps = 19/319 (5%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LS L C S + L ++ GL IL +L+ FC S ++ A +
Sbjct: 8 LSLLARCKSMRELKKLR------GL-----ILSKLIDFCVDSXFGDINNADLVFRQIDAP 56
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
SV I WN++IRG+ + PR ++ ++ + G P FT+PFVLKAC I+ + G +
Sbjct: 57 SVYI-WNSMIRGFVNNHNPRMSMLLYRQLIENGYSPDHFTFPFVLKACCAIADQDCGKCI 115
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
+ KSG ++D YT L+ Y SC + KVFD++ +VV+W +I V N
Sbjct: 116 HCCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPIWNVVAWTCLIAGYVNNNQP 175
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG-------TVLN 264
EA+ F M G EP+E TM+ L C + G+WVH + + G + N
Sbjct: 176 YEALKVFKDMSHCGVEPNEITMVNALIXCARSRDFDTGQWVHQHIRKAGYDPFMSTSNSN 235
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
L TA+++MYAKCG+ AR LF++M + N+ +W++MI Q+ +EAL+LF +M
Sbjct: 236 IILATAILEMYAKCGSFKIARDLFNKMPQRNIVSWNSMINAYNQYERHKEALDLFFDMWT 295
Query: 325 SSISPNYVTFLGVLCACNH 343
S I P+ TFL VL C H
Sbjct: 296 SGIYPDKATFLSVLSVCAH 314
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 151/469 (32%), Positives = 252/469 (53%), Gaps = 7/469 (1%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H Q+ L +D I L+ ++ +L AR L + + W ++I GY
Sbjct: 101 LHGQVVKYMLHSDLYIETTLLNM--YAACGDLKSAR-FLFERMGHRNKVVWTSMISGYMK 157
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+ P EA+ ++ M+ G P E T ++ ACAE+ L GM++ +++ + +
Sbjct: 158 NHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVL 217
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD-LG 225
+ LV Y C + A +VFD + ++ V +W+ +I V+N EA+ F ++
Sbjct: 218 GSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSN 277
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
P+E T+L V+SAC +LG+L G+WVH + + L +LIDM++KCG + A+
Sbjct: 278 MRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAK 337
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F M ++ +W++M+ GLA HG EAL F M+ + + P+ +TF+GVL AC+HAG
Sbjct: 338 RIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAG 397
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+V++G + F+E+E ++G++ HY M D+L RAG L EA FI MP QP+ + ++
Sbjct: 398 LVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSM 457
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
L A +++ +G E R LLELEP ++++N YA MW +V VR M
Sbjct: 458 LGACRVYN---NLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEK 514
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
G++K G S V + H F +G S E+A I +L + +K++ +
Sbjct: 515 GIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGY 563
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 192/376 (51%), Gaps = 17/376 (4%)
Query: 53 VSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPRE 112
V+G + L +L+ S + YA S+ + V + WN+++R + S+ PR
Sbjct: 3 VTGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRVLDV-LTWNSMLRAFVNSNMPRR 61
Query: 113 AVWVFIDMKRRGIK-PTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLV 171
A+ + +M R P FT+P +LK CA + G + V K L SD+Y L+
Sbjct: 62 ALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLL 121
Query: 172 RFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDET 231
Y +C + A +F+ M R+ V W +I+ ++N EA+ + KM++ GF PDE
Sbjct: 122 NMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEV 181
Query: 232 TMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM 291
TM ++SAC EL +L +G +H + E + LG+AL++MYAKCG + AR +F ++
Sbjct: 182 TMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQL 241
Query: 292 EEINVWTWSAMILGLAQHGYAEEALELFSNMK-NSSISPNYVTFLGVLCACNHAGMVEDG 350
+ +V+ WSA+I G ++ + EAL+LF + S++ PN VT L V+ AC G +E G
Sbjct: 242 SDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETG 301
Query: 351 ---YRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLS 407
+ Y + H + +++ D+ ++ G + A +M ++ L+S
Sbjct: 302 RWVHDYITRTQKGHSVSL----NNSLIDMFSKCGDIDAAKRIFDSMSYKD-------LIS 350
Query: 408 ASSIHDAKYQDGVGNE 423
+S+ + G+G E
Sbjct: 351 WNSMVNGLALHGLGRE 366
>gi|356528208|ref|XP_003532697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 444
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 151/439 (34%), Positives = 237/439 (53%), Gaps = 14/439 (3%)
Query: 43 HLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIR 102
L Q+HA + L + + + F SS+ +L +A S + WN LIR
Sbjct: 15 QLLQLHALFLKTSLDHHPFFISQ---FLLQSSTISLPFAASFFHSLPTLPPLFAWNTLIR 71
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
+A + P ++ +F ++ + P FTYPFVLKACA S L G + + K+G S
Sbjct: 72 AFAATPTPFHSLTLFRLLQTSPLNPDNFTYPFVLKACARSSSLPLGGTLHSLTLKTGFRS 131
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
+ N L+ Y C A VFD+M +R VVSW+ +I V + + F +
Sbjct: 132 HRHVGNALLNMYAECYAVMSARMVFDEMTDRDVVSWSSLIAAYVAS---NSPLDAFYVFR 188
Query: 223 DLGFE---PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
++G E P+ T++ +LSACT+ NL +G+ +H + G ++ LGTAL +MYAKCG
Sbjct: 189 EMGMENEQPNSVTLVSLLSACTKTLNLRVGESIHSYVTSNGIEMDVALGTALFEMYAKCG 248
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
+ A L+F+ M + N+ + + MI LA HG ++ + LF+ M++ + + ++F +L
Sbjct: 249 EIDKALLVFNSMGDKNLQSCTIMISALADHGREKDVISLFTQMEDGGLRLDSLSFAVILS 308
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
AC+H G+V++G YF M V+GIKP HY M D+L RAG ++EAY I MP +PN
Sbjct: 309 ACSHMGLVDEGKMYFDRMVRVYGIKPSVEHYGCMVDLLGRAGFIQEAYDIIKGMPMEPND 368
Query: 400 IVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVR 459
++LR+ L A H + + ++ L ELE N V+ AN ++ W+ +++R
Sbjct: 369 VILRSFLGACRNH--GWVPSLDDDF---LSELESELGANYVLTANVFSTCASWKDANDLR 423
Query: 460 RFMKNVGLKKMKGMSWVEL 478
MK GLKK+ G SWVE+
Sbjct: 424 VAMKLKGLKKVPGCSWVEV 442
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 159/477 (33%), Positives = 251/477 (52%), Gaps = 10/477 (2%)
Query: 33 SFLKLCCSKKHLYQIHAQIQVSGLQ--NDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
S L+ C S I QI V L+ N A S S + A + N
Sbjct: 1010 SVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQN--K 1067
Query: 91 DSVPIP-WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
D + + WN ++ GY + ++A+ +F + + G K + T KAC + L++G
Sbjct: 1068 DDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGK 1127
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ A+ K+G DSD++ N+ ++ Y C +A VF+ + V+W +I+ CV+N
Sbjct: 1128 QIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNG 1187
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+A+ + +M+ PDE T ++ A + + L G+ +H +I+ V + +GT
Sbjct: 1188 NEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGT 1247
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
+L+DMYAKCG + A LF +M N+ W+AM++GLAQHG AEEA+ LF +MK+ I P
Sbjct: 1248 SLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEP 1307
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
+ V+F+G+L AC+HAG+ + Y Y H M + +GI+P HY + D L RAG ++EA
Sbjct: 1308 DRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKV 1367
Query: 390 IMNMPFQPNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAE 448
I MPF+ + + RALL A I D + G V RL LEP S V+++N YA
Sbjct: 1368 IETMPFKASASINRALLGACRIQGDVE----TGKRVAARLFALEPFDSAAYVLLSNIYAA 1423
Query: 449 VGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
W+ V++ R+ MK +KK G SW+++ +H F S + IY +E +
Sbjct: 1424 ANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEM 1480
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 175/381 (45%), Gaps = 20/381 (5%)
Query: 41 KKHLYQIHAQIQVSGLQND---AQILKELVRFCTLSSSKNLT-----YARSILCNYVNDS 92
+K +Q+ ++ SGL+ D Q++ V K L YA + + N
Sbjct: 809 EKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDNPD 868
Query: 93 VPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQ 152
V WN + W+ A+ F++M I T VL A A L G QV
Sbjct: 869 V-FCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVH 927
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
KSGLDSDV N+LV Y A +VF+DM ++SWN +I+ C ++
Sbjct: 928 GIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEE 987
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTEL-GNLSLGKWVHLQLIERGTVLNCQLGTAL 271
E+V F+ + G +PD T+ VL AC+ L L++ + +H+ ++ G + + + T L
Sbjct: 988 ESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTL 1047
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
ID+Y+K G + A LF +++++ W+AM+ G ++ALELFS + S +
Sbjct: 1048 IDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQ 1107
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKP---MRIHYHT-MADILARAGHLKEAY 387
+T AC +++ G + H H IK +H ++ + D+ + G + A
Sbjct: 1108 ITLATAAKACGCLVLLDQGKQI-----HAHAIKAGFDSDLHVNSGILDMYIKCGDMVNA- 1161
Query: 388 TFIMNMPFQPNPIVLRALLSA 408
+ N P+ + +++S
Sbjct: 1162 GIVFNYISAPDDVAWTSMISG 1182
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 178/386 (46%), Gaps = 54/386 (13%)
Query: 22 SDLLSKARQCLS-FLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKN 77
+ L S R L+ LKLC + L+ +H GL+ D + LV S
Sbjct: 720 ASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNI--YSKCGR 777
Query: 78 LTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLK 137
+ AR +L +++ + + WN +++GY +EA +F + R G++P EF+ +L
Sbjct: 778 MRDAR-LLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILN 836
Query: 138 ACAEISGLNEGM----QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER 193
+E++ +EG QVQA K L D
Sbjct: 837 GVSEVN-WDEGKWLADQVQAYAAKLSLSDD----------------------------NP 867
Query: 194 SVVSWNVIITVCVENLWLGE---AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
V WN ++ C LW G+ A+ FV M L + D T+LVVL+A +L LGK
Sbjct: 868 DVFCWNKKLSEC---LWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGK 924
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
VH ++ G + + +L++MY+K G AR +F+ M+ +++ +W++MI AQ
Sbjct: 925 QVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSS 984
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIH- 369
EE++ LF ++ + + P++ T VL AC+ + DG ++ HVH +K I
Sbjct: 985 LEEESVNLFIDLLHEGLKPDHFTLASVLRACSS---LIDGLNISRQI-HVHALKTGNIAD 1040
Query: 370 ---YHTMADILARAGHLKEAYTFIMN 392
T+ D+ +++G ++EA N
Sbjct: 1041 SFVATTLIDVYSKSGKMEEAEFLFQN 1066
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 89/188 (47%), Gaps = 5/188 (2%)
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII----- 202
G A + SG D + +NNL+ Y C A +VFD ER +V+WN I+
Sbjct: 640 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 699
Query: 203 TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV 262
+V + E + F ++ T+ VL C G L + VH I+ G
Sbjct: 700 SVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLE 759
Query: 263 LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM 322
+ + AL+++Y+KCG + ARLLF M E +V W+ M+ G Q G +EA +LFS
Sbjct: 760 WDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEF 819
Query: 323 KNSSISPN 330
S + P+
Sbjct: 820 HRSGLRPD 827
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 136/325 (41%), Gaps = 48/325 (14%)
Query: 48 HAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPWNNLIRG 103
HA+I VSG D + L+ S +L+ AR + D+ P + WN ++
Sbjct: 644 HARIVVSGSAGDHFLSNNLLTM--YSKCGSLSSARQVF-----DTTPERDLVTWNAILGA 696
Query: 104 YAWS-----DRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
YA S +E + +F ++ T T VLK C L V K
Sbjct: 697 YAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKI 756
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
GL+ DV+ + LV Y C R RDA +FD M ER VV WN+++ V+ EA F
Sbjct: 757 GLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLF 816
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
+ G PDE ++ ++L+ +E+ N GKW+ Q + YA
Sbjct: 817 SEFHRSGLRPDEFSVQLILNGVSEV-NWDEGKWLADQ----------------VQAYA-- 857
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
A+L S + +V+ W+ + G A+E F NM +I + VT L VL
Sbjct: 858 -----AKLSLSD-DNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVL 911
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGI 363
A +E G + VHGI
Sbjct: 912 AAVAGTDDLELG-------KQVHGI 929
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 168/493 (34%), Positives = 243/493 (49%), Gaps = 41/493 (8%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+S L C + + QIH + GL IL +L+R T Y R ++ V
Sbjct: 54 ISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYPRRVI-EPVQF 112
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
P W +IRGY + EA+ ++ M++ I P FT+ +LKAC + LN G Q
Sbjct: 113 RNPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDLNLGRQF 172
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWN------------ 199
A + VY N ++ Y C A KVFD+M ER V+SW
Sbjct: 173 HAQTFRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIAAYARVGNM 232
Query: 200 -------------------VIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
++T +N EA+ YF +M+ G DE T+ +SAC
Sbjct: 233 ESAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISAC 292
Query: 241 TELGNLSLGKWVHLQLIERGTVLNCQ---LGTALIDMYAKCGAVGCARLLFSRMEEINVW 297
+LG +Q+ ++ +G+ALIDMY+KCG V A +F M NV+
Sbjct: 293 AQLGASKYADRA-VQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMNNKNVF 351
Query: 298 TWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
++S+MILGLA HG A+EAL+LF M ++I PN VTF+G L AC+H+G+V+ G + F
Sbjct: 352 SYSSMILGLATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQGRQVFAS 411
Query: 357 MEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKY 416
M G++P R HY M D+L RAG L+EA I M +P+ V ALL A IH+
Sbjct: 412 MYQTFGVEPTRDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGVWGALLGACRIHN--- 468
Query: 417 QDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSW- 475
+ L ELEP N ++++N Y+ G W V +VR+ +K GLKK +SW
Sbjct: 469 NPDIAEIAAEHLFELEPDIIGNYILLSNVYSSAGDWGGVLSVRKLIKEKGLKKTPAVSWV 528
Query: 476 VELGGSIHRFYSG 488
V+ G +H+F+ G
Sbjct: 529 VDKNGQMHKFFPG 541
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 144/378 (38%), Positives = 212/378 (56%), Gaps = 4/378 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I GYA S R EA+ F +MKR + P E T VL ACA+ L G V++
Sbjct: 230 VSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSW 289
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ GL S++ N L+ Y C A +F+ +CE+ ++SWNV+I EA
Sbjct: 290 IEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEA 349
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQLGTALID 273
+ F KM+ EP++ T + +L AC LG L LGKW+H + ++ L N L T+LID
Sbjct: 350 LALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLID 409
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MYAKCG + A+ +F+ M+ ++ +W+AMI GLA HG+A ALELF M++ P+ +T
Sbjct: 410 MYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDIT 469
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
F+GVL AC+HAG+VE G + F M + I P HY M D+L RAG EA + NM
Sbjct: 470 FVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNM 529
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
+P+ + +LL A +H +G + L ELEP V+++N YA G W+
Sbjct: 530 EMKPDGAIWGSLLGACRVHG---NVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWD 586
Query: 454 KVSNVRRFMKNVGLKKMK 471
V+ +R + + G+KK +
Sbjct: 587 DVARIRTKLNDKGMKKXQ 604
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 217/420 (51%), Gaps = 41/420 (9%)
Query: 12 IFPP-----KPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKEL 66
+ PP +P++ L + L+ L C S ++L QIH+QI +GL N L +L
Sbjct: 11 VMPPPTLHFQPTSDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKL 70
Query: 67 VRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIK 126
+ FC +S NL+YA +L + WN +IRG + S P A+ ++ M G++
Sbjct: 71 IEFCAISPFGNLSYAL-LLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVE 129
Query: 127 PTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYG----------- 175
P +T+PF+LK+CA++ EG Q+ +V K GL+SD + + +L+ Y
Sbjct: 130 PNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELV 189
Query: 176 ----SCRRK----------------RDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
S R DA ++F+++ R VSWN +I ++ EA+
Sbjct: 190 FSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEAL 249
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY 275
+F +MK P+E+TM+ VLSAC + G+L LG WV + + G N +L ALIDMY
Sbjct: 250 AFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMY 309
Query: 276 AKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFL 335
+KCG + AR LF + E ++ +W+ MI G + +EAL LF M+ S++ PN VTF+
Sbjct: 310 SKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFV 369
Query: 336 GVLCACNHAGMVEDGYRYFHEM--EHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
+L AC + G ++ G ++ H + G+ + + ++ D+ A+ G+++ A M
Sbjct: 370 SILPACAYLGALDLG-KWIHAYIDKKFLGLTNTSL-WTSLIDMYAKCGNIEAAKQVFAGM 427
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 155/471 (32%), Positives = 246/471 (52%), Gaps = 6/471 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGY 104
Q+H+++ GL D + LV + ++ ++ +R + +V + W +I Y
Sbjct: 270 QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV-MSWTAIITAY 328
Query: 105 AWSDR-PREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD 163
S +EA+ +F M I+P F++ VLKAC +S G QV + K G+ S
Sbjct: 329 VQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASV 388
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
N+L+ Y R DA K FD + E+++VS+N I+ +NL EA F ++ D
Sbjct: 389 NCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIAD 448
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G T +LS +G + G+ +H +L++ G N + ALI MY++CG +
Sbjct: 449 TGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEA 508
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A +F+ ME+ NV +W++MI G A+HG+A ALE+F M + PN +T++ VL AC+H
Sbjct: 509 AFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSH 568
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
GM+ +G ++F+ M HGI P HY M D+L R+G L EA FI +MP + +V R
Sbjct: 569 VGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWR 628
Query: 404 ALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMK 463
LL A +H +G +LE EP ++++N +A G W+ V +R+ MK
Sbjct: 629 TLLGACRVHG---NTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMK 685
Query: 464 NVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
L K G SW+E+ +HRF+ G S + IYQ L+ L +K + +
Sbjct: 686 ERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGY 736
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/368 (31%), Positives = 193/368 (52%), Gaps = 10/368 (2%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H ++ SGL+ D+ +L L+ S + AR I N + W+ ++ +A
Sbjct: 66 VHRKLMQSGLELDSVVLNTLISL--YSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFAN 123
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG-LDSDVY 165
+ +A+W F+DM G P E+ + V++AC+ + G + V K+G L++DV
Sbjct: 124 NSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVC 183
Query: 166 TNNNLVR-FYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL 224
L+ F A KVFD M ER++V+W ++IT + +A+ F+ M+
Sbjct: 184 VGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELS 243
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC---GAV 281
G+ PD T VLSACTELG L+LGK +H ++I G L+ +G +L+DMYAKC G+V
Sbjct: 244 GYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSV 303
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAE-EALELFSNMKNSSISPNYVTFLGVLCA 340
+R +F +M E NV +W+A+I Q G + EA+ELF M + I PN+ +F VL A
Sbjct: 304 DDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKA 363
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPI 400
C + G + + + GI + +++ + AR+G +++A ++ F+ N +
Sbjct: 364 CGNLSDPYTGEQVYSYAVKL-GIASVNCVGNSLISMYARSGRMEDARK-AFDILFEKNLV 421
Query: 401 VLRALLSA 408
A++
Sbjct: 422 SYNAIVDG 429
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 120/234 (51%), Gaps = 3/234 (1%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M ++ P TY +LK+C G V + +SGL+ D N L+ Y C
Sbjct: 35 MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 94
Query: 180 KRDACKVFDDMC-ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
A +F+ M +R +VSW+ +++ N +A+ F+ M +LGF P+E V+
Sbjct: 95 TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIR 154
Query: 239 ACTELGNLSLGKWVHLQLIERGTV-LNCQLGTALIDMYAK-CGAVGCARLLFSRMEEINV 296
AC+ +G+ ++ +++ G + + +G LIDM+ K G +G A +F +M E N+
Sbjct: 155 ACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNL 214
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
TW+ MI AQ G A +A++LF +M+ S P+ T+ VL AC G++ G
Sbjct: 215 VTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG 268
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 167/502 (33%), Positives = 248/502 (49%), Gaps = 14/502 (2%)
Query: 5 PVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHL---YQIHAQIQVSGLQNDAQ 61
PVP + + +L R +F+ C K+L ++HA + S DA
Sbjct: 28 PVPAASAVLRDLDLLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAF 87
Query: 62 ILKELVR-FCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDM 120
+ L+ +C S + AR + + + W +LI GYA +D P EA+ + M
Sbjct: 88 LDNSLIHLYCKCGS---VLEARKVFDEMRRKDM-VSWTSLIAGYAQNDMPEEAIGLLPGM 143
Query: 121 KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRK 180
+ KP FT+ +LKA + G Q+ A K DVY + L+ Y C
Sbjct: 144 LKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMM 203
Query: 181 RDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
A VFD + ++ VSWN +I+ A+ F +M GFE T V S+
Sbjct: 204 DMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSI 263
Query: 241 TELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
LG L GKWVH +I+ + G L+DMYAK G++ AR +F R+++ ++ TW+
Sbjct: 264 ARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWN 323
Query: 301 AMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHV 360
M+ AQ+G +EA+ F M+ S I N VTFL +L AC+H G+V++G RYF EM
Sbjct: 324 TMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYF-EMMKE 382
Query: 361 HGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH-DAKYQDG 419
+ ++P H+ T+ +L RAG L A FI MP +P V ALL+A +H +AK
Sbjct: 383 YDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMHKNAK---- 438
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
VG + EL+P S V++ N YA G W+ + VRR MK G+KK SWVE+
Sbjct: 439 VGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRRIMKTTGVKKEPACSWVEME 498
Query: 480 GSIHRFYSGYDSQVELAGIYQI 501
S+H F + D+ IY++
Sbjct: 499 NSVHMFVANDDTHPRAEEIYKM 520
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 164/508 (32%), Positives = 264/508 (51%), Gaps = 41/508 (8%)
Query: 42 KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
K + QIHA++ V G D ++ V+ LS K L YA IL + N++I
Sbjct: 20 KEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQIL-DRSEKPTLFALNSMI 78
Query: 102 RGYAWSDRPREAVWVFIDMKRRG--IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
R + S P ++ + + G +KP +T F+++AC + G+QV + G
Sbjct: 79 RAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRG 138
Query: 160 LDSDVYTNNNLVRFYG----------------------------SCRRKRD---ACKVFD 188
D+D + L+ Y +C R D A K+F+
Sbjct: 139 FDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFE 198
Query: 189 DMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSL 248
M ER ++WN +I+ + EA+ F M+ G + + M+ VLSACT+LG L
Sbjct: 199 GMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQ 258
Query: 249 GKWVHLQLIERGTV-LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA 307
G+W H IER + + +L T L+D+YAKCG + A +F MEE NV+TWS+ + GLA
Sbjct: 259 GRWAH-SYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLA 317
Query: 308 QHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
+G+ E+ LELFS MK ++PN VTF+ VL C+ G V++G R+F M + GI+P
Sbjct: 318 MNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQL 377
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD-GVGNEVRR 426
HY + D+ ARAG L++A + I MP +P+ V +LL AS + Y++ +G +
Sbjct: 378 EHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRM----YKNLELGVLASK 433
Query: 427 RLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFY 486
++LELE V+++N YA+ W+ VS+VR+ MK+ G++K G S +E+ G +H F+
Sbjct: 434 KMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFF 493
Query: 487 SGYDSQVELAGIYQILETLNLHMKVLNF 514
G S + I + + ++ +++ +
Sbjct: 494 VGDKSHPKYTQIDAVWKDISRRLRLAGY 521
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 161/413 (38%), Positives = 237/413 (57%), Gaps = 6/413 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIK-PTEFTYPFVLKACAEISGLNEGMQVQA 153
IPW+ +I YA SD+ +EA+ +F M++ + P FT+ VL+ACA + LN G Q+ +
Sbjct: 272 IPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHS 331
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
V K GLDS+V+ +N L+ Y C ++ K+F E++ V+WN II V+ L GE
Sbjct: 332 CVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQ-LGDGE 390
Query: 214 -AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
A+ F M L +P E T VL A L L G+ +H I+ + + +LI
Sbjct: 391 KALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLI 450
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
DMYAKCG + ARL F +M++ + +W+A+I G + HG EAL LF M+ S+ PN +
Sbjct: 451 DMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKL 510
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
TF+GVL AC++AG+++ G +F M +GI+P HY M +L R+G EA I
Sbjct: 511 TFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGE 570
Query: 393 MPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMW 452
+PFQP+ +V RALL A IH K D +G +R+LE+EP+ V+++N YA W
Sbjct: 571 IPFQPSVMVWRALLGACVIH--KNLD-LGKVCAQRVLEMEPQDDATHVLLSNMYATAKRW 627
Query: 453 EKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+ V+ VR+ MK +KK G+SWVE G +H F G S + I+ +LE L
Sbjct: 628 DNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWL 680
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 183/413 (44%), Gaps = 19/413 (4%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN-YVNDSVPIPWNNLIRGYA 105
+HA + G Q DA + L+ S N+ AR + Y D V W ++ YA
Sbjct: 126 VHAYVYKLGHQADAFVGTALID--AYSVCGNVDAARQVFDGIYFKDMVS--WTGMVACYA 181
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ +++ +F M+ G +P FT LK+C + G V K D D+Y
Sbjct: 182 ENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLY 241
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
L+ Y +A + F++M + ++ W+++I+ ++ EA+ F +M+
Sbjct: 242 VGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSS 301
Query: 226 -FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCA 284
P+ T VL AC L L+LG +H +++ G N + AL+D+YAKCG + +
Sbjct: 302 VVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENS 361
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA 344
LF+ E N W+ +I+G Q G E+AL LFSNM I P VT+ VL A
Sbjct: 362 VKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASL 421
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRA 404
+E G R H + + +++ D+ A+ G + +A M Q + + A
Sbjct: 422 VALEPG-RQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQ-DEVSWNA 479
Query: 405 LLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSN 457
L+ SIH G+G E ++ S+ NK VG+ SN
Sbjct: 480 LICGYSIH------GLGMEALNLFDMMQQSNSK-----PNKLTFVGVLSACSN 521
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 141/293 (48%), Gaps = 2/293 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ + L +G++ S + + A + + + R G + +F + +LK + + + V A
Sbjct: 70 VSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAY 129
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V K G +D + L+ Y C A +VFD + + +VSW ++ EN ++
Sbjct: 130 VYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDS 189
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M+ +G+ P+ T+ L +C L +GK VH ++ + +G AL+++
Sbjct: 190 LLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLEL 249
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS-ISPNYVT 333
Y K G + A+ F M + ++ WS MI AQ ++EALELF M+ SS + PN T
Sbjct: 250 YTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFT 309
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
F VL AC ++ G + H G+ + + D+ A+ G ++ +
Sbjct: 310 FASVLQACASLVLLNLGNQ-IHSCVLKVGLDSNVFVSNALMDVYAKCGEIENS 361
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 138/312 (44%), Gaps = 32/312 (10%)
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
N G + ++ K G D++ N L+ Y DA K+FD+M + VS+ +
Sbjct: 20 NAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGF 79
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDE---TTMLVVLSACTELGNLSLGKWVHLQLIERGTV 262
+ A +++ G+E ++ TT+L +L + +L + L VH + + G
Sbjct: 80 SRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVS-MDLADTCLS--VHAYVYKLGHQ 136
Query: 263 LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM 322
+ +GTALID Y+ CG V AR +F + ++ +W+ M+ A++ E++L LF M
Sbjct: 137 ADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQM 196
Query: 323 KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH-------TMAD 375
+ PN T L +CN G F + VHG +++ Y + +
Sbjct: 197 RIMGYRPNNFTISAALKSCN-------GLEAFKVGKSVHGC-ALKVCYDRDLYVGIALLE 248
Query: 376 ILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
+ ++G + EA F MP + + I ++S + D + LEL R
Sbjct: 249 LYTKSGEIAEAQQFFEEMP-KDDLIPWSLMISRYAQSDKS----------KEALELFCRM 297
Query: 436 SQNLVIVANKYA 447
Q+ V+V N +
Sbjct: 298 RQSSVVVPNNFT 309
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 159/473 (33%), Positives = 235/473 (49%), Gaps = 39/473 (8%)
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
++ ARS+ V+ + WN +I GY S EA +F M + EFT+ VL
Sbjct: 243 DVGAARSVF-EEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVL 301
Query: 137 KACAEISGLNEGMQVQANVTKSGL----DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
ACA G V +T+ ++ + NN LV Y C A ++FD+M
Sbjct: 302 SACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKS 361
Query: 193 RSVVSWNVIITVCVENLWLGEAV-------------------GY------------FVKM 221
+ VVSWN I++ VE+ L +AV GY F +M
Sbjct: 362 KDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRM 421
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
+ +P + T +SAC ELG+L GK +H L++ G + G ALI MYA+CGAV
Sbjct: 422 RAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAV 481
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
A L+F M I+ +W+AMI L QHG+ EALELF M I P+ ++FL VL AC
Sbjct: 482 KEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTAC 541
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIV 401
NH+G+V++G++YF M+ GI P HY + D+L RAG + EA I MPF+P P +
Sbjct: 542 NHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSI 601
Query: 402 LRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRF 461
A+LS +G +L ++ P+ ++++N Y+ G W + VR+
Sbjct: 602 WEAILSGCRTSGDME---LGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKL 658
Query: 462 MKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
M++ G+KK G SW+E G +H F G E +Y+ LE + M+ L +
Sbjct: 659 MRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKFLEMVGARMRKLGY 711
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 166/401 (41%), Gaps = 82/401 (20%)
Query: 91 DSVP------IPWNNLIRGYAWSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEIS 143
D+VP + N +I YA + AV VF + G ++P ++++ +L A +
Sbjct: 112 DAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLP 171
Query: 144 GLN--EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR---KRDACKVFDDMCERSVVSW 198
++ Q+Q +V KSG + +N LV Y C RDA KV D+M ++ ++W
Sbjct: 172 NISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTW 231
Query: 199 NVIITVCVENLWLGEAVGYFVKMKDLGFEP------------------------------ 228
++ V +G A F ++ D+ F+
Sbjct: 232 TTMVVGYVRRGDVGAARSVFEEV-DVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERV 290
Query: 229 --DETTMLVVLSACTELGNLSLGKWVHLQL--IERGTVLNCQL--GTALIDMYAKCGAVG 282
DE T VLSAC G + GK VH Q+ ++ V L AL+ +Y+KCG +
Sbjct: 291 PLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIA 350
Query: 283 CARLLFSRMEEINVWTWSA-------------------------------MILGLAQHGY 311
AR +F M+ +V +W+ M+ G G+
Sbjct: 351 VARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGF 410
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
+E+AL+LF+ M+ + P T+ G + AC G ++ G + + + G + +
Sbjct: 411 SEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQL-GFEGSNSAGN 469
Query: 372 TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
+ + AR G +KEA + MP + + A++SA H
Sbjct: 470 ALITMYARCGAVKEANLMFLVMP-NIDSVSWNAMISALGQH 509
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 114/257 (44%), Gaps = 19/257 (7%)
Query: 75 SKNLTYARSILCNYVNDSV---------PIPWNN------LIRGYAWSDRPREAVWVFID 119
SK++ +IL YV S +P+ N ++ GY +A+ +F
Sbjct: 361 SKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNR 420
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M+ +KP ++TY + AC E+ L G Q+ ++ + G + N L+ Y C
Sbjct: 421 MRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGA 480
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
++A +F M VSWN +I+ ++ EA+ F +M G PD + L VL+A
Sbjct: 481 VKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTA 540
Query: 240 CTELGNLSLGKWVHLQLIER--GTVLNCQLGTALIDMYAKCGAVGCARLLFSRME-EINV 296
C G + G + + + ++R G + T LID+ + G +G AR L M E
Sbjct: 541 CNHSGLVDEG-FQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTP 599
Query: 297 WTWSAMILGLAQHGYAE 313
W A++ G G E
Sbjct: 600 SIWEAILSGCRTSGDME 616
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 90/237 (37%), Gaps = 52/237 (21%)
Query: 168 NNLVRFYGSCRRKRDACKVFDDM--CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
+LV Y + R A FD + R V N +I+ AV F + G
Sbjct: 92 TSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151
Query: 226 -FEPDETTMLVVLSACTELGNLSLGKWVHLQ--LIERGTVLNCQLGTALIDMYAKC---- 278
PD+ + +LSA L N+S+ LQ +++ G + AL+ +Y KC
Sbjct: 152 SLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALE 211
Query: 279 ------------------------------GAVGCARLLFSRMEEINV---WTWSAMILG 305
G VG AR +F EE++V W+AMI G
Sbjct: 212 ATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVF---EEVDVKFDVVWNAMISG 268
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
G EA ELF M + + TF VL AC +AG +F + VHG
Sbjct: 269 YVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAG-------FFAHGKSVHG 318
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 160/490 (32%), Positives = 252/490 (51%), Gaps = 20/490 (4%)
Query: 34 FLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
LK C HL +HAQ+ G + D + L+ + + L AR++
Sbjct: 125 LLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIAL--YAKCRRLGCARTVF----- 177
Query: 91 DSVPIP------WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
+ +P+P W ++ YA + P EA+ +F M++ +KP VL A +
Sbjct: 178 EGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQD 237
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L +G + A+V K GL+++ +L Y C + A +FD M +++ WN +I+
Sbjct: 238 LEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISG 297
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
+N + +A+ F +M + PD ++ +SAC ++G+L +W+ + +
Sbjct: 298 YAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDD 357
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+ +ALIDM+AKCG+V CAR +F R + +V WSAMI+G HG A EA+ L+ M+
Sbjct: 358 VFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMER 417
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ PN VTFLG+L ACNH+GMV +G+ +F+ M H I P + HY + D+L RAGHL
Sbjct: 418 DGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMAD-HKINPQQQHYACIIDLLGRAGHLD 476
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
+AY I MP QP V ALLSA H +G ++L ++P + + V ++N
Sbjct: 477 QAYEVIKCMPVQPGVTVWGALLSACKKH---RHVELGKYAAQQLFSIDPSNTGHYVQLSN 533
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILET 504
YA +W++V+ VR MK GL K G SWVE+ G + F G S I + +E
Sbjct: 534 LYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEW 593
Query: 505 LNLHMKVLNF 514
+ +K F
Sbjct: 594 IESRLKEGGF 603
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 203/382 (53%), Gaps = 7/382 (1%)
Query: 33 SFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDS 92
S + K L QIHA++ V GLQ ++ +L+ SS ++T+AR + +
Sbjct: 26 SLIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIH--ASSSYGDITFARQVFDDLPRPQ 83
Query: 93 VPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQ 152
V PWN +IRGY+ ++ ++A+ ++ M+ + P FT+P +LKAC +S L G V
Sbjct: 84 V-FPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVH 142
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC--ERSVVSWNVIITVCVENLW 210
A V + G ++DV+ N L+ Y CRR A VF+ + ER++VSW I++ +N
Sbjct: 143 AQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
EA+ F +M+ + +PD ++ VL+A T L +L G+ +H +++ G L +
Sbjct: 203 PVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLIS 262
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
L MYAKCG V A++LF +M+ N+ W+AMI G A++G+A++A++LF M N + P+
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPD 322
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
++ + AC G +E R+ E + + D+ A+ G ++ A + +
Sbjct: 323 TISITSAISACAQVGSLEQA-RWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARS-V 380
Query: 391 MNMPFQPNPIVLRALLSASSIH 412
+ + +V A++ +H
Sbjct: 381 FDRTLDRDVVVWSAMIVGYGLH 402
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 142/424 (33%), Positives = 226/424 (53%), Gaps = 7/424 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +I + AV F M+ + P EFT+ V+ CA + + G Q+ A+
Sbjct: 236 VSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAH 295
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V + GL + N+++ Y C + A VF + R ++SW+ +I+ + EA
Sbjct: 296 VIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEA 355
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
Y M+ G P+E VLS C + L GK +H ++ G N + +ALI+M
Sbjct: 356 FDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINM 415
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG++ A +F E N+ +W+AMI G A+HGY++EA++LF + + P+ VTF
Sbjct: 416 YSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTF 475
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ VL AC+HAG+V+ G+ YF+ + VH I P + HY M D+L RAG L +A + I +MP
Sbjct: 476 IAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMP 535
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
FQ + +V LL A IH G ++L+L+P + + +AN YA G W++
Sbjct: 536 FQRDDVVWSTLLRACRIHG---DVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKE 592
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL----NLHMK 510
+ VR+ MK+ G+ K G SW++ + F SG S E IY +L+ L +HM+
Sbjct: 593 AAEVRKMMKSKGVVKEPGWSWIKFKDRVSAFVSGDRSHPEGEYIYDVLDLLASQAEMHMQ 652
Query: 511 VLNF 514
++F
Sbjct: 653 EMDF 656
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 144/295 (48%), Gaps = 7/295 (2%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +I G + +EA+ F DM + + +T+ LKACA+ LN G ++
Sbjct: 135 VSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQ 194
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE- 213
K G + + N L Y C + ++F+ M +R VVSW II + N+ +G+
Sbjct: 195 TLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTII---MSNVQIGQE 251
Query: 214 --AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
AV F +M++ P+E T V+S C LG + G+ +H +I RG V + + ++
Sbjct: 252 ENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSI 311
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
+ MY+KC + A +F + ++ +WS MI G AQ G EEA + S M+ PN
Sbjct: 312 MAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNE 371
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
F VL C + ++E G + H G++ + + ++ ++ G +KEA
Sbjct: 372 FAFASVLSVCGNMAILEQG-KQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEA 425
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 155/366 (42%), Gaps = 22/366 (6%)
Query: 62 ILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDM- 120
+LK LV+ + +L AR + + I W +I GY EA+ +F M
Sbjct: 7 VLKNLVK------TGHLNNARQLFDKMLQRD-EISWTTIISGYVNGMNTTEALSLFSKMW 59
Query: 121 KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRK 180
G+ F LKAC ++ G + K+ + V+ + LV Y +
Sbjct: 60 VEPGLHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKV 119
Query: 181 RDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
+ C VF +M R+VVSW II V + EA+ YF M D T L AC
Sbjct: 120 DEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKAC 179
Query: 241 TELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
+ G L+ G+ +H Q +++G + L MY KCG + LF M + +V +W+
Sbjct: 180 ADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWT 239
Query: 301 AMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHV 360
+I+ Q G E A++ F M+ + +SPN TF V+ C G +E G E H
Sbjct: 240 TIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWG-----EQLHA 294
Query: 361 HGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN---PIVLRALLSASSIHDAKYQ 417
H I+ + D L+ A + Y+ + + R ++S S++ Q
Sbjct: 295 HVIR------RGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQ 348
Query: 418 DGVGNE 423
G G E
Sbjct: 349 GGCGEE 354
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 175/478 (36%), Positives = 256/478 (53%), Gaps = 12/478 (2%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S L+ C + + L Q+H ++ VSGL D + +LV ++ + +AR +
Sbjct: 67 SVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDL--YAACGLVGHARRLFDGMP 124
Query: 90 NDSVPIPWNNLIRGYAWSDRPRE-AVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
+V + WN LIR YA D P E A+ ++ M G++P FTYP LKACA + L G
Sbjct: 125 KRNVFL-WNVLIRAYA-RDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETG 182
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
+V V + D++ LV Y C DA VFD + R V WN +I +N
Sbjct: 183 REVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQN 242
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
EA+ M G P T++ +SA + L G+ +H RG +L
Sbjct: 243 GRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLK 302
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK-NSSI 327
T+L+DMYAK G V AR+LF ++ + + +W+AMI G HG+ +EAL+LF+ M+ + +
Sbjct: 303 TSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQV 362
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
+P+ +TF+GVL ACNH GMV++ +F M V+ IKP H+ + D+L AG +EAY
Sbjct: 363 TPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAY 422
Query: 388 TFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYA 447
I MP QP+ + ALL+ IH +G ++L+ELEP + N V+++N YA
Sbjct: 423 DLIKGMPMQPDSGIWGALLNGCKIHKNVE---LGELALQKLIELEPEDAGNYVLLSNIYA 479
Query: 448 EVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+ G WEK + VR+ M N GLKK+ G SW+EL G H F G S A IY+ LE L
Sbjct: 480 QSGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERL 537
>gi|449494077|ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 163/486 (33%), Positives = 258/486 (53%), Gaps = 12/486 (2%)
Query: 34 FLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSV 93
L+ C S + Q+ A + ++G + + +L+ C +SS +L+YA I Y+
Sbjct: 7 LLQKCSSFSQIKQLQANLIINGDFHFSSSRTKLLELCAISSFGDLSYALHIF-RYIPYPS 65
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMK-RRGIKPTE-FTYPFVLKACAEISGLNEGMQV 151
WN +IRG A S P AV+ + M G+ + T F LKACA +E +Q+
Sbjct: 66 TNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSFALKACARALARSEAIQL 125
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
+ + + G ++DV L+ Y A K+FD+M + + SWN +I +
Sbjct: 126 HSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGSRP 185
Query: 212 GEAVGYFVKMK-DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
+A+ F +MK D P+ T+ L AC++LG L G+ VH ++E N Q+
Sbjct: 186 ADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLDSNVQVCNV 245
Query: 271 LIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
+IDMYAKCG++ A +F M + ++ TW+ MI+ A HG +AL+LF + S +SP
Sbjct: 246 VIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSP 305
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
+ V++L VLCACNHAG+VEDG + F+ M G++P HY +M D+L RAG LKEAY
Sbjct: 306 DAVSYLAVLCACNHAGLVEDGLKLFNSMTQ-RGLEPNIKHYGSMVDLLGRAGRLKEAYDI 364
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEV-RRRLLELEPRGSQNLVIVANKYAE 448
+ ++PF PN ++ + LL A Y D E+ R+L+E+ V+++N YA
Sbjct: 365 VSSLPF-PNMVLWQTLLGACRT----YGDVEMAELASRKLVEMGFISCGXFVLLSNVYAA 419
Query: 449 VGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLH 508
W+ V VR M+ +KK G S++E+ G +++F +G S IY L+ +NL
Sbjct: 420 RQRWDDVGRVRDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLR 479
Query: 509 MKVLNF 514
+K +
Sbjct: 480 IKAYGY 485
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 155/471 (32%), Positives = 246/471 (52%), Gaps = 6/471 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGY 104
Q+H+++ GL D + LV + ++ ++ +R + +V + W +I Y
Sbjct: 252 QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV-MSWTAIITAY 310
Query: 105 AWSDR-PREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD 163
S +EA+ +F M I+P F++ VLKAC +S G QV + K G+ S
Sbjct: 311 VQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASV 370
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
N+L+ Y R DA K FD + E+++VS+N I+ +NL EA F ++ D
Sbjct: 371 NCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIAD 430
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G T +LS +G + G+ +H +L++ G N + ALI MY++CG +
Sbjct: 431 TGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEA 490
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A +F+ ME+ NV +W++MI G A+HG+A ALE+F M + PN +T++ VL AC+H
Sbjct: 491 AFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSH 550
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
GM+ +G ++F+ M HGI P HY M D+L R+G L EA FI +MP + +V R
Sbjct: 551 VGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWR 610
Query: 404 ALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMK 463
LL A +H +G +LE EP ++++N +A G W+ V +R+ MK
Sbjct: 611 TLLGACRVHG---NTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMK 667
Query: 464 NVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
L K G SW+E+ +HRF+ G S + IYQ L+ L +K + +
Sbjct: 668 ERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGY 718
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/368 (31%), Positives = 193/368 (52%), Gaps = 10/368 (2%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H ++ SGL+ D+ +L L+ S + AR I N + W+ ++ +A
Sbjct: 48 VHRKLMQSGLELDSVVLNTLISL--YSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFAN 105
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG-LDSDVY 165
+ +A+W F+DM G P E+ + V++AC+ + G + V K+G L++DV
Sbjct: 106 NSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVC 165
Query: 166 TNNNLVR-FYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL 224
L+ F A KVFD M ER++V+W ++IT + +A+ F+ M+
Sbjct: 166 VGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELS 225
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC---GAV 281
G+ PD T VLSACTELG L+LGK +H ++I G L+ +G +L+DMYAKC G+V
Sbjct: 226 GYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSV 285
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAE-EALELFSNMKNSSISPNYVTFLGVLCA 340
+R +F +M E NV +W+A+I Q G + EA+ELF M + I PN+ +F VL A
Sbjct: 286 DDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKA 345
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPI 400
C + G + + + GI + +++ + AR+G +++A ++ F+ N +
Sbjct: 346 CGNLSDPYTGEQVYSYAVKL-GIASVNCVGNSLISMYARSGRMEDARK-AFDILFEKNLV 403
Query: 401 VLRALLSA 408
A++
Sbjct: 404 SYNAIVDG 411
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 120/234 (51%), Gaps = 3/234 (1%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M ++ P TY +LK+C G V + +SGL+ D N L+ Y C
Sbjct: 17 MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 76
Query: 180 KRDACKVFDDMC-ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
A +F+ M +R +VSW+ +++ N +A+ F+ M +LGF P+E V+
Sbjct: 77 TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIR 136
Query: 239 ACTELGNLSLGKWVHLQLIERGTV-LNCQLGTALIDMYAK-CGAVGCARLLFSRMEEINV 296
AC+ +G+ ++ +++ G + + +G LIDM+ K G +G A +F +M E N+
Sbjct: 137 ACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNL 196
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
TW+ MI AQ G A +A++LF +M+ S P+ T+ VL AC G++ G
Sbjct: 197 VTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG 250
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 163/497 (32%), Positives = 249/497 (50%), Gaps = 38/497 (7%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV--NDSVPIPWNNLIRGY 104
+HA + G++ +A + LV ++ + AR++L + P+ WN LI G+
Sbjct: 41 VHAHVVKFGMELNAHVASSLV--LMYAARGDGAVARTLLDAWPARGGDTPVVWNALISGH 98
Query: 105 AWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDV 164
S + R + F+DM R G+ PT TY VL AC + + GMQV V SG+ D+
Sbjct: 99 RRSRQFRLSCCSFVDMVRTGVVPTPVTYITVLSACGKDKYIWLGMQVHKCVVASGVLPDL 158
Query: 165 YTNNNLVRFYGSCRRKRDACKVF-------------------------------DDMCER 193
N L+ Y C A ++F D M ER
Sbjct: 159 KVGNALIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMPER 218
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
VSW +I V+ EA+ F +M+ DE TM+ V++AC +LG L G+W
Sbjct: 219 DTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQLGALETGEWAR 278
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
+ + G ++ +G AL+DMY+KCG++ A +F M + +TW+A+ILGLA +G+ E
Sbjct: 279 IYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGHGE 338
Query: 314 EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
EA+ +F M +P+ VTF+GVL AC HAG+V+ G +F M +GI P +H+ +
Sbjct: 339 EAINMFYRMLRVFEAPDEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCL 398
Query: 374 ADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP 433
D+L RAG LKEA I NMP +PN + LL+A +H +G LLEL+
Sbjct: 399 IDLLGRAGKLKEALETIGNMPMRPNSAIWGTLLAACRVHG---NSEIGQLAAEHLLELDT 455
Query: 434 RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQV 493
++++N YA+ WE V +R+ + G+KK G S +E+ G+IH F +G S
Sbjct: 456 ENGMVYILLSNLYAKSNRWEDVRRLRQVIMEKGIKKEPGCSLIEMNGTIHEFIAGDRSHP 515
Query: 494 ELAGIYQILETLNLHMK 510
IY L+ + +K
Sbjct: 516 MSKEIYSKLDKVLTDLK 532
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 138/313 (44%), Gaps = 36/313 (11%)
Query: 116 VFIDMKRRGIKPTEFTYPFVLKACAEISGLNE-GMQVQANVTKSGLDSDVYTNNNLVRFY 174
V++ M RG +P +T+P +LKA + G V A+V K G++ + + ++LV Y
Sbjct: 5 VYVGMLARGARPDAYTFPPLLKAVTAAAERGAVGDAVHAHVVKFGMELNAHVASSLVLMY 64
Query: 175 GSCRRKRDACKVFDDMCER---SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDET 231
+ A + D R + V WN +I+ + + FV M G P
Sbjct: 65 AARGDGAVARTLLDAWPARGGDTPVVWNALISGHRRSRQFRLSCCSFVDMVRTGVVPTPV 124
Query: 232 TMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC------------- 278
T + VLSAC + + LG VH ++ G + + ++G ALIDMYA+C
Sbjct: 125 TYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECSEMDAAWELFEGM 184
Query: 279 ------------------GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS 320
G V AR LF M E + +W+AMI G Q G EALE+F
Sbjct: 185 EVRNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMFR 244
Query: 321 NMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARA 380
M+ S + + T + V+ AC G +E G M HGIK + + D+ ++
Sbjct: 245 EMQFSKVRADEFTMVSVVTACAQLGALETGEWARIYMSR-HGIKMDTFVGNALVDMYSKC 303
Query: 381 GHLKEAYTFIMNM 393
G +++A M
Sbjct: 304 GSIQQALGVFKEM 316
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 153/452 (33%), Positives = 230/452 (50%), Gaps = 35/452 (7%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W+ ++ Y ++ EA+ +F++MK G+ E L AC+ + + G V
Sbjct: 236 VSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGL 295
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD------------------------- 189
K G++ V N L+ Y SC DA ++FDD
Sbjct: 296 AVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQD 355
Query: 190 -------MCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
M E+ VVSW+ +I+ ++ EA+ F +M+ G PDET ++ +SACT
Sbjct: 356 AEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTH 415
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
L L LGKW+H + +N L T LIDMY KCG V A +F MEE V TW+A+
Sbjct: 416 LATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAV 475
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
ILGLA +G E++L +F++MK + PN +TF+GVL AC H G+V DG YF+ M H H
Sbjct: 476 ILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHK 535
Query: 363 IKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGN 422
I+ HY M D+L RAG LKEA I +MP P+ ALL A H + +G
Sbjct: 536 IEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKH---RDNEMGE 592
Query: 423 EVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSI 482
+ R+L++L+P V+++N YA G W V +R M G+ K G S +E G++
Sbjct: 593 RLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTV 652
Query: 483 HRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
H F +G + ++ I +L+ + +K+ +
Sbjct: 653 HEFLAGDKTHPQINDIEHMLDVVAAKLKIEGY 684
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 186/451 (41%), Gaps = 98/451 (21%)
Query: 33 SFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDS 92
S L+ C +H Q+ +Q ++GL D L+ F + S++ + + N++ +
Sbjct: 8 SLLQSCKCPRHFKQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLRNP 67
Query: 93 VPIPWNNLIRGYAW-SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
WN ++R + + + P +A+ + KP +TYP +L+ CA EG Q+
Sbjct: 68 NTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVSEFEGRQL 127
Query: 152 QANVTKSGLDSDVYTNNNLVRFY------GSCRRK------------------------- 180
A+ SG D DVY N L+ Y GS RR
Sbjct: 128 HAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEV 187
Query: 181 RDACKVFDDM-------------------C--------------ERSVVSWNVIITVCVE 207
+A +VF+ M C ER +VSW+ +++ +
Sbjct: 188 EEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQ 247
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
N EA+ FV+MK G DE ++ LSAC+ + N+ +G+WVH ++ G L
Sbjct: 248 NEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSL 307
Query: 268 GTALIDMYA--------------------------------KCGAVGCARLLFSRMEEIN 295
ALI +Y+ +CG++ A +LF M E +
Sbjct: 308 KNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKD 367
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
V +WSAMI G AQH EAL LF M+ + P+ + + AC H ++ G ++ H
Sbjct: 368 VVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLG-KWIH 426
Query: 356 EMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+ ++ I T+ D+ + G ++ A
Sbjct: 427 AYISRNKLQVNVILSTTLIDMYMKCGCVENA 457
>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
Length = 749
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 151/419 (36%), Positives = 229/419 (54%), Gaps = 4/419 (0%)
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
N+ V +PWN +I G+ S EA+ +F+ M + IK +TY L + A++ L
Sbjct: 326 NFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLE 385
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
Q+ + KSG V N L+ Y C K+FD E + +SW ++T
Sbjct: 386 YVKQLHGMIWKSG-SIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYS 444
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
++ +A+ F +M+++GF+P++ T VL++C L +L G+ VH + G +
Sbjct: 445 QSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKC 504
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+ + LIDMYAKCG+V A +F +++ +V +W+AMI G AQHG A++ALELF M+
Sbjct: 505 VESVLIDMYAKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVL 564
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+PN TFL +L AC+H G+V++G RYFH ME +G+ P HY + DIL R G L EA
Sbjct: 565 PNPNSATFLCLLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEA 624
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKY 446
+ FIM MP +P+ V LL A +H + +++L P LV+++N Y
Sbjct: 625 WKFIMKMPIEPDEKVWSTLLGACRVHG---NIQLAKIAAQKVLSYNPDDFAALVLLSNTY 681
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
E G E NVR MK+ ++K GMSW+ +GG IH+F SG + IY+ L L
Sbjct: 682 REAGNIEGGLNVRNMMKSQAMRKETGMSWICIGGKIHKFCSGDQYHPQKDDIYKTLNVL 740
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 165/356 (46%), Gaps = 20/356 (5%)
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D +P W L+ G + R+ + F+++ I P E+ ++AC +
Sbjct: 120 VFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDS 179
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
+ G V A V G S + N +L+ Y R D+CKVF+ + R+ VSWN +I+
Sbjct: 180 IVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISG 239
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
V N EA F++M P+ + V A +LG++ G++++ E G N
Sbjct: 240 FVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSN 299
Query: 265 CQLGTALIDMYAKCGAVGCARLLF-SRMEEINV-WTWSAMILGLAQHGYAEEALELFSNM 322
+GTALIDM+AKCG V + +F S V W+AMI G G+ EEA+ LF M
Sbjct: 300 IHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRM 359
Query: 323 KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI--KPMRIHY---HTMADIL 377
++I + T+ C+ + D R ++ +HG+ K I + + D
Sbjct: 360 CQNNIKRDVYTY------CSTLNSIAD-MRSLEYVKQLHGMIWKSGSIGVSLCNALMDAY 412
Query: 378 ARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP 433
A+ G L +A + + + N I L++A S ++++D + + R + +P
Sbjct: 413 AKCGEL-DAMRKLFDTWEESNQISWTTLVTAYS-QSSEWEDALSVFSQMREMGFQP 466
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 118/227 (51%), Gaps = 4/227 (1%)
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
N LV Y C A +VFD++ ++SV SW V++ EN + + + YFV++
Sbjct: 102 NQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIV 161
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
PDE + + AC + ++ +G+ VH Q+I RG + T+L+ MYAK G +G + +
Sbjct: 162 PDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKV 221
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMV 347
F+ +E N +W+AMI G +G EA F M I PN F+ V A G V
Sbjct: 222 FNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDV 281
Query: 348 EDGYRYFHEMEHVHGIKPMRIHYHT-MADILARAGHLKEAYT-FIMN 392
E G RY + + G++ IH T + D+ A+ G + E+++ F+ N
Sbjct: 282 EKG-RYINRIAFEIGMQS-NIHVGTALIDMFAKCGCVTESWSVFVSN 326
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 149/328 (45%), Gaps = 5/328 (1%)
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
N + + + WN +I G+ + EA F+ M I+P + V KA ++ +
Sbjct: 223 NSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVE 282
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS--WNVIITV 204
+G + + G+ S+++ L+ + C ++ VF V+ WN +I+
Sbjct: 283 KGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISG 342
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
+ EA+ F++M + D T L++ ++ +L K +H + + G++
Sbjct: 343 FTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSGSI-G 401
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
L AL+D YAKCG + R LF EE N +W+ ++ +Q E+AL +FS M+
Sbjct: 402 VSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQMRE 461
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
PN VTF GVL +C +E G + H + G + + D+ A+ G ++
Sbjct: 462 MGFQPNQVTFSGVLASCASLCSLEYG-QQVHSLTCKTGFARDKCVESVLIDMYAKCGSVR 520
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIH 412
+A ++ P+ I A++S + H
Sbjct: 521 DAIKVFESLK-DPDVISWTAMISGYAQH 547
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 172/504 (34%), Positives = 257/504 (50%), Gaps = 22/504 (4%)
Query: 19 NCNSDLLSKARQCLS-FLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSS 74
NC S L R S L C + L Q IHA IQ S ++D +L ++
Sbjct: 97 NCGS--LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCG 154
Query: 75 SKNLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEF 130
S L A+ + D +P + W LI GY+ S + EA+ +F M G +P EF
Sbjct: 155 S--LEEAQDLF-----DKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEF 207
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
T +LKA + G Q+ A K G D +V+ ++L+ Y R+A +F+ +
Sbjct: 208 TLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSL 267
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
++VVSWN +I + F +M GFEP T VL AC G+L GK
Sbjct: 268 AAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGK 326
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
WVH +I+ G +G LIDMYAK G++ A+ +F R+ + ++ +W+++I G AQHG
Sbjct: 327 WVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHG 386
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
EAL+LF M + + PN +TFL VL AC+H+G++++G YF E+ H I+ H+
Sbjct: 387 LGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYF-ELMKKHKIEAQVAHH 445
Query: 371 HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLE 430
T+ D+L RAG L EA FI MP +P V ALL A +H K D +G ++ E
Sbjct: 446 VTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMH--KNMD-LGVYAAEQIFE 502
Query: 431 LEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYD 490
L+P S V+++N YA G + VR+ MK G+KK SWVE+ +H F + D
Sbjct: 503 LDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDD 562
Query: 491 SQVELAGIYQILETLNLHMKVLNF 514
S I ++ E ++ +K + +
Sbjct: 563 SHPMREEIQRMWEKISGKIKEIGY 586
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 161/483 (33%), Positives = 247/483 (51%), Gaps = 10/483 (2%)
Query: 32 LSFLKLCCSKKHLYQ----IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
SF+ C++ +L+ IH+ + +G D + +V C S L A + +
Sbjct: 107 FSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVV--CFYSKCGFLRDAWKVFDD 164
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
V +V + W +I G + REAV +F + G++P F VL+ACA + L
Sbjct: 165 MVVKNV-VSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLES 223
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G + + + GL +V+ +LV Y C +A VFD M E+ +V W+ +I
Sbjct: 224 GRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYAS 283
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
N EA+ F +M+ + PD M+ LS+C LG L LG W + + N L
Sbjct: 284 NGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVL 343
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
GT+LID YAKCG++ A ++ M+E + ++A+I GLA +G A +F M I
Sbjct: 344 GTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGI 403
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
PN TF+G+LC C HAG+V+DG YF+ M H + P HY M D+LARAG L EA+
Sbjct: 404 PPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAH 463
Query: 388 TFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYA 447
I MP + N IV +LL +H + + V ++L+ELEP S + V+++N Y+
Sbjct: 464 NLIKGMPMKANVIVWGSLLGGCRLHR---ETQLAEHVLKQLIELEPWNSGHYVLLSNIYS 520
Query: 448 EVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNL 507
W++ +R + G++K+ G SWVE+ G +H F G S IY+ LE+L
Sbjct: 521 ASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFK 580
Query: 508 HMK 510
+K
Sbjct: 581 DLK 583
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/371 (32%), Positives = 194/371 (52%), Gaps = 3/371 (0%)
Query: 42 KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
KH H ++ L +D +L ++R T++ S N Y + +S +N +I
Sbjct: 18 KHAKLAHCRLLRLNLHHDNDLLSIILR-STINFSNNAQYPILVFHKTPTNSNTFLYNTMI 76
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
RG DR AV ++ M + I P FT+ FVLKACA ++ + G+ + + V K+G D
Sbjct: 77 RGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFD 136
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
DV+ N+V FY C RDA KVFDDM ++VVSW +I C+E EAV F +
Sbjct: 137 CDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGL 196
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
+ G PD ++ VL AC LG+L G+W+ + E G N + T+L+DMY KCG++
Sbjct: 197 LESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSM 256
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
AR +F M E ++ WSAMI G A +G EA+ELF M+ ++ P+ +G L +C
Sbjct: 257 EEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSC 316
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIV 401
G +E G + + + + ++ D A+ G ++EA + M + + +V
Sbjct: 317 ASLGALELG-NWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALG-VYKMMKEKDRVV 374
Query: 402 LRALLSASSIH 412
A++S +++
Sbjct: 375 FNAVISGLAMY 385
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 169/552 (30%), Positives = 268/552 (48%), Gaps = 55/552 (9%)
Query: 8 TTNHIFPPKPSNCN--------------SDLLSKARQCLSFLKLCCSKKHLYQIHAQIQV 53
T +H PP N SD + + S + S HL QIHA +
Sbjct: 13 TASHPSPPSIFTTNRSSVLPSSSSTARTSDRFQEVERFASLIDKSKSVAHLLQIHASLLR 72
Query: 54 SGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREA 113
GL ++ + +L R + ++ L + + N ++ ++ +I + S A
Sbjct: 73 RGLYHNPILNFKLQR--SYAALGRLDCSVFVF-NTFDEPNVFSFSAIIHSHVQSRLFDRA 129
Query: 114 VWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRF 173
+ M G++P FT+ VLK+C+ L G + K GL SD+Y LV
Sbjct: 130 FGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGKVLHCQAIKLGLGSDLYVRTGLVDV 185
Query: 174 YGS-----CRRK--------------------------RDACKVFDDMCERSVVSWNVII 202
Y C R+ A +F+ M ER VV WNV+I
Sbjct: 186 YARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMI 245
Query: 203 TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV 262
++ E++ F +M P+E T+L VLSAC +LG L G+W+H + +G
Sbjct: 246 GGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQ 305
Query: 263 LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM 322
+N +GTALIDMY+KCG++ ARL+F R+ + +V W++MI+G A HG+++ AL+LF M
Sbjct: 306 INVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEM 365
Query: 323 KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGH 382
+ P +TF+G+L AC H G+VE+G +F M +GI+P HY M ++L RAGH
Sbjct: 366 TETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGH 425
Query: 383 LKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIV 442
L+EAY + NM +P++ LL +H +G E+ + L++ + S V++
Sbjct: 426 LEEAYGLVKNMTIAADPVLWGTLLGCCRLH---VNIKLGEEIAKFLVDQKLANSGTYVLL 482
Query: 443 ANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQIL 502
+N YA G WE V+ +R MK G++K G S +E+ +H F +G + IY +L
Sbjct: 483 SNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVML 542
Query: 503 ETLNLHMKVLNF 514
+N +K +
Sbjct: 543 NEINSWLKARGY 554
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 163/504 (32%), Positives = 241/504 (47%), Gaps = 41/504 (8%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
++H G+ +D + L+ K + AR + + V V + W +L Y
Sbjct: 185 EVHDDATRCGVMSDVFVGNALIH--AYGKCKCVEGARRVFDDLVVRDV-VSWTSLSSCYV 241
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
PR+ + VF +M G+KP T +L ACAE+ L G ++ + G+ +++
Sbjct: 242 KCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLF 301
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV--------------------- 204
+ LV Y C R+A VFD M R VVSWN ++T
Sbjct: 302 VCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDG 361
Query: 205 --------------CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
C+EN EAV F KM+ +GF+P+E T+ +L AC+ NL +GK
Sbjct: 362 VRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGK 421
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
+H + V + TAL+ MYAKCG + +R +F M +V W+ MI+ A HG
Sbjct: 422 EIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHG 481
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
+EAL LF M S + PN VTF GVL C+H+ +VE+G + F+ M H ++P HY
Sbjct: 482 NGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHY 541
Query: 371 HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLE 430
+ DI +RAG L EAY FI MP +P ALL+A ++ + ++L E
Sbjct: 542 SCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKIS---AKKLFE 598
Query: 431 LEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYD 490
+EP N V + N MW + S VR MK G+ K G SW+++G +H F G
Sbjct: 599 IEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDK 658
Query: 491 SQVELAGIYQILETLNLHMKVLNF 514
S +E IY L+ L MK+ +
Sbjct: 659 SNIESDKIYNFLDELVEKMKMAGY 682
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 144/291 (49%), Gaps = 8/291 (2%)
Query: 91 DSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D++P P + LI EA+ ++ ++ RGIKP + KACA
Sbjct: 122 DNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDAL 181
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
+V + T+ G+ SDV+ N L+ YG C+ A +VFDD+ R VVSW + + V
Sbjct: 182 RVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYV 241
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+ + + + F +M G +P+ T+ +L AC EL +L GK +H + G V+N
Sbjct: 242 KCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLF 301
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+ +AL+ +YAKC +V AR++F M +V +W+ ++ ++ E+ LF M
Sbjct: 302 VCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDG 361
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL 377
+ + T+ V+ C G E+ F +M+ + G KP I T++ IL
Sbjct: 362 VRADEATWNAVIGGCMENGRSEEAVEMFRKMQKM-GFKPNEI---TISSIL 408
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 1/212 (0%)
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
A ++FD++ + + + +I+ + EA+ + +++ G +PD L AC
Sbjct: 117 ARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAV 176
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
G+ K VH G + + +G ALI Y KC V AR +F + +V +W+++
Sbjct: 177 SGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSL 236
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
+ G+ + +++F M S + PN +T +L AC ++ G + H HG
Sbjct: 237 SSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSG-KEIHGFAVRHG 295
Query: 363 IKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ + + A+ ++EA MP
Sbjct: 296 MVVNLFVCSALVSLYAKCLSVREARMVFDLMP 327
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 261 TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS 320
T + LG LI + G AR LF + + + T S +I L HG + EA++++S
Sbjct: 94 TNIPSHLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYS 153
Query: 321 NMKNSSISPNYVTFLGVLCACNHAG 345
+++ I P+ FL AC +G
Sbjct: 154 SLQERGIKPDMPVFLAAAKACAVSG 178
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 159/500 (31%), Positives = 249/500 (49%), Gaps = 37/500 (7%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+IH G +D + LVR ++ + AR + + V + W+ +I GY
Sbjct: 143 EIHGLAAKLGFDSDPFVQTGLVRM--YAACGRIAEARLMFDKMFHRDV-VTWSIMIDGYC 199
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
S +A+ +F +MK ++P E VL AC L+ G + + ++ + D +
Sbjct: 200 QSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPH 259
Query: 166 TNNNLVRFYGSCR-------------------------------RKRDACKVFDDMCERS 194
+ LV Y SC + +A VF+ M ++
Sbjct: 260 LQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKD 319
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHL 254
+V W+ +I+ E+ EA+ F +M+ LG +PD+ TML V++AC LG L KW+HL
Sbjct: 320 LVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHL 379
Query: 255 QLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEE 314
+ + G + ALI+MYAKCG++ AR +F +M NV +W+ MI A HG A
Sbjct: 380 FVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGS 439
Query: 315 ALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMA 374
AL F M++ +I PN +TF+GVL AC+HAG+VE+G + F+ M + H I P +HY M
Sbjct: 440 ALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMV 499
Query: 375 DILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPR 434
D+ RA L+EA + MP PN I+ +L++A +H + +G +RLLEL+P
Sbjct: 500 DLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHG---EIELGEFAAKRLLELDPD 556
Query: 435 GSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVE 494
V ++N YA+ WE V VR+ MK+ G+ K +G S EL IH F S
Sbjct: 557 HDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKH 616
Query: 495 LAGIYQILETLNLHMKVLNF 514
IY+ L + +K++ +
Sbjct: 617 ADEIYEKLYEVVSKLKLVGY 636
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/417 (31%), Positives = 207/417 (49%), Gaps = 45/417 (10%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELV-RFCTLSSSKNLTYARSILCNYVN 90
S L S HL Q+HAQI S L +L +LV C LSSS L YA S+
Sbjct: 27 FSALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSS--LDYALSVF----- 79
Query: 91 DSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
+ +P P N +R + S+ P + + V+ M+ +G+ F++P +LKA + + L
Sbjct: 80 NLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLV 139
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
EG+++ K G DSD + LVR Y +C R +A +FD M R VV+W+++I
Sbjct: 140 EGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYC 199
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
++ +A+ F +MK+ EPDE + VLSAC GNLS GK +H ++E V++
Sbjct: 200 QSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPH 259
Query: 267 LGTALIDMYAKCGAVGC-------------------------------ARLLFSRMEEIN 295
L +AL+ MYA CG++ AR +F++M + +
Sbjct: 260 LQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKD 319
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
+ WSAMI G A+ +EAL LF+ M++ I P+ VT L V+ AC H G + D ++ H
Sbjct: 320 LVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGAL-DQAKWIH 378
Query: 356 EMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
+G + + ++ A+ G L+ A MP + N I ++SA ++H
Sbjct: 379 LFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMP-RKNVISWTCMISAFAMH 434
>gi|15232821|ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g47530
gi|6522536|emb|CAB61979.1| putative protein [Arabidopsis thaliana]
gi|62320272|dbj|BAD94558.1| hypothetical protein [Arabidopsis thaliana]
gi|332644772|gb|AEE78293.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 160/490 (32%), Positives = 249/490 (50%), Gaps = 12/490 (2%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLS-SSKNLTYARSILCNYVN 90
LS + K HL QIHA + + L ++ + + LS +++ Y+ + +N
Sbjct: 15 LSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLN 74
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTE-FTYPFVLKACAEISGLNEGM 149
++ N +IR ++ S P E +F ++R P + F LK C + L G+
Sbjct: 75 PTLS-HCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGL 133
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ + G SD L+ Y +C DACKVFD++ +R VSWNV+ + + N
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNK 193
Query: 210 WLGEAVGYFVKMK---DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+ + F KMK D +PD T L+ L AC LG L GK VH + E G
Sbjct: 194 RTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALN 253
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
L L+ MY++CG++ A +F M E NV +W+A+I GLA +G+ +EA+E F+ M
Sbjct: 254 LSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFG 313
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH-GIKPMRIHYHTMADILARAGHLKE 385
ISP T G+L AC+H+G+V +G +F M IKP HY + D+L RA L +
Sbjct: 314 ISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDK 373
Query: 386 AYTFIMNMPFQPNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
AY+ I +M +P+ + R LL A +H D + +G V L+EL+ + + V++ N
Sbjct: 374 AYSLIKSMEMKPDSTIWRTLLGACRVHGDVE----LGERVISHLIELKAEEAGDYVLLLN 429
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILET 504
Y+ VG WEKV+ +R MK + G S +EL G++H F S IY++L
Sbjct: 430 TYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAE 489
Query: 505 LNLHMKVLNF 514
+N +K+ +
Sbjct: 490 INQQLKIAGY 499
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 163/504 (32%), Positives = 241/504 (47%), Gaps = 41/504 (8%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
++H G+ +D + L+ K + AR + + V V + W +L Y
Sbjct: 99 EVHDDATRCGVMSDVFVGNALIH--AYGKCKCVEGARRVFDDLVVRDV-VSWTSLSSCYV 155
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
PR+ + VF +M G+KP T +L ACAE+ L G ++ + G+ +++
Sbjct: 156 KCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLF 215
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV--------------------- 204
+ LV Y C R+A VFD M R VVSWN ++T
Sbjct: 216 VCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDG 275
Query: 205 --------------CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
C+EN EAV F KM+ +GF+P+E T+ +L AC+ NL +GK
Sbjct: 276 VRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGK 335
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
+H + V + TAL+ MYAKCG + +R +F M +V W+ MI+ A HG
Sbjct: 336 EIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHG 395
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
+EAL LF M S + PN VTF GVL C+H+ +VE+G + F+ M H ++P HY
Sbjct: 396 NGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHY 455
Query: 371 HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLE 430
+ DI +RAG L EAY FI MP +P ALL+A ++ + ++L E
Sbjct: 456 SCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKIS---AKKLFE 512
Query: 431 LEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYD 490
+EP N V + N MW + S VR MK G+ K G SW+++G +H F G
Sbjct: 513 IEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDK 572
Query: 491 SQVELAGIYQILETLNLHMKVLNF 514
S +E IY L+ L MK+ +
Sbjct: 573 SNIESDKIYNFLDELVEKMKMAGY 596
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 144/291 (49%), Gaps = 8/291 (2%)
Query: 91 DSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D++P P + LI EA+ ++ ++ RGIKP + KACA
Sbjct: 36 DNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDAL 95
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
+V + T+ G+ SDV+ N L+ YG C+ A +VFDD+ R VVSW + + V
Sbjct: 96 RVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYV 155
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+ + + + F +M G +P+ T+ +L AC EL +L GK +H + G V+N
Sbjct: 156 KCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLF 215
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+ +AL+ +YAKC +V AR++F M +V +W+ ++ ++ E+ LF M
Sbjct: 216 VCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDG 275
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL 377
+ + T+ V+ C G E+ F +M+ + G KP I T++ IL
Sbjct: 276 VRADEATWNAVIGGCMENGRSEEAVEMFRKMQKM-GFKPNEI---TISSIL 322
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 1/212 (0%)
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
A ++FD++ + + + +I+ + EA+ + +++ G +PD L AC
Sbjct: 31 ARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAV 90
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
G+ K VH G + + +G ALI Y KC V AR +F + +V +W+++
Sbjct: 91 SGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSL 150
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
+ G+ + +++F M S + PN +T +L AC ++ G + H HG
Sbjct: 151 SSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSG-KEIHGFAVRHG 209
Query: 363 IKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ + + A+ ++EA MP
Sbjct: 210 MVVNLFVCSALVSLYAKCLSVREARMVFDLMP 241
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 261 TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS 320
T + LG LI + G AR LF + + + T S +I L HG + EA++++S
Sbjct: 8 TNIPSHLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYS 67
Query: 321 NMKNSSISPNYVTFLGVLCACNHAG 345
+++ I P+ FL AC +G
Sbjct: 68 SLQERGIKPDMPVFLAAAKACAVSG 92
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/415 (35%), Positives = 224/415 (53%), Gaps = 3/415 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I W +I G + REA+ +F +M+ G +FT+ VL AC + L EG Q+ A
Sbjct: 236 ISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAY 295
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V ++ +V+ + LV Y CR + A VF M +++V+SW ++ +N + EA
Sbjct: 296 VIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEA 355
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
V F +M+ G EPD+ T+ V+S+C L +L G H + + G + + ALI +
Sbjct: 356 VKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITL 415
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y KCG+ + LF+ M + +W+A++ G AQ G A E + LF M + P+ VTF
Sbjct: 416 YGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTF 475
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+GVL AC+ AG+VE G +YF M HGI P+ H + D+L RAG L+EA FI NMP
Sbjct: 476 IGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMP 535
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
P+ + LLS+ +H +G L+ LEP+ + V++++ YA G W+K
Sbjct: 536 CHPDVVGWATLLSSCRVHGDME---IGKWAADSLIALEPQNPASYVLLSSLYASKGKWDK 592
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
V+ +RR M++ ++K G SW++ G +H F + S L IY LE LN M
Sbjct: 593 VAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKM 647
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 183/392 (46%), Gaps = 36/392 (9%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVF-IDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ WN I GYA +AV V+ + +K + T+ +L C++ ++ G Q+
Sbjct: 103 VSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQING 162
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV----------------- 196
+ K G SDV+ + LV Y DA + FD+M ER+VV
Sbjct: 163 QILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEE 222
Query: 197 --------------SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
SW ++IT ++N EA+ F +M+ GF D+ T VL+AC
Sbjct: 223 SQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGS 282
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
L L GK +H +I N +G+AL+DMY+KC ++ A +F RM + NV +W+AM
Sbjct: 283 LLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAM 342
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
++G Q+G++EEA+++F M+ + + P+ T V+ +C + +E+G + FH V G
Sbjct: 343 LVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQ-FHCRALVSG 401
Query: 363 IKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGN 422
+ + + + + G + ++ M + + + ALL A K + +G
Sbjct: 402 LISFITVSNALITLYGKCGSTENSHRLFTEMNIR-DEVSWTALL-AGYAQFGKANETIGL 459
Query: 423 EVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
R L+P G + V + + G+ EK
Sbjct: 460 FERMLAHGLKPDGV-TFIGVLSACSRAGLVEK 490
>gi|255578965|ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
Length = 1530
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 215/385 (55%), Gaps = 3/385 (0%)
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
P+ W+ +I G+ + F ++ R G++P +T PFV+KAC + L+ G +
Sbjct: 1146 PVSWSIMIGGFVKVGEFMQCYKTFKELIRNGVQPDNYTLPFVIKACRDTVALDMGRLIHC 1205
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
V K GL D + LV Y C+ DA +FD M + +V+W V+I E E
Sbjct: 1206 VVLKYGLHLDHFVCAALVDMYAKCKVIEDAKLLFDVMPSKDLVTWTVMIGGYAECGNAKE 1265
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
++ F +++ GF PD+ M+ +++AC +LG ++ ++VH + L+ LGTA+ID
Sbjct: 1266 SLVLFDHLREEGFVPDKIAMVSIVNACAKLGAMNKARFVHEYVNRNRFSLDVILGTAMID 1325
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MYAKCG V AR +F M NV +WSAMI HG ++ALELF M +S I PN +T
Sbjct: 1326 MYAKCGDVDSAREIFDNMHHKNVISWSAMIAAYGYHGQGKKALELFPMMLSSGILPNNIT 1385
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
F+ +L AC+HAG+VEDG M G++P H+ M D+L RAG L EA+ FI NM
Sbjct: 1386 FVSLLYACSHAGLVEDGLTLLSLMWESFGVRPDIKHHTCMVDLLGRAGQLTEAFRFIENM 1445
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
+ + + +LL A IH + + + + LLEL+P+ N ++++N YA G W+
Sbjct: 1446 TVEKDEGLWSSLLGACRIHK---RIDLAEKAAKSLLELQPQNPGNYILLSNIYANAGQWK 1502
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVEL 478
V+ +R M LKK+ G +W+EL
Sbjct: 1503 DVAKIRDLMTKRKLKKIPGYTWIEL 1527
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 163/490 (33%), Positives = 255/490 (52%), Gaps = 28/490 (5%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW 97
C + L QIH QI +GL L L++ +SS NL YA I NY+++ +
Sbjct: 159 CNNFNTLKQIHTQIITTGLSFQTYCLSHLIK---ISSKFNLPYAFKIF-NYISNPTIFLY 214
Query: 98 NNLIRGYAWSDRPREAVWVFI----DMKRRGIKPTEFTYPFVLKAC-AEISGLNEGMQVQ 152
N LI + F + + ++P FT+P + KAC + S + G +
Sbjct: 215 NTLISSLINQTNQNQIHLAFSLYNKILTNKNLQPNSFTFPSLFKACCSNQSWFHYGPLLH 274
Query: 153 ANVTKSGLDS-DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
+V K D + +L+ FY + + +FD + E + +WNVI+ +
Sbjct: 275 THVLKFLQPPFDNFVQASLLNFYAKYGKMCVSRYIFDRINEPDLATWNVILNAYARSSSY 334
Query: 212 G-------------EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
E++ F M+ +G P+E T++ ++SAC+ LG +S G WVH ++
Sbjct: 335 HSYSNSFDDADFSLESLYLFRDMQVIGIRPNEVTIVALISACSNLGAVSQGFWVHCFVLR 394
Query: 259 RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEE--INVWTWSAMILGLAQHGYAEEAL 316
+N +GTA +DMY+KCG + A +F +M E + + ++AMI G A HGY +AL
Sbjct: 395 NKIKMNRFVGTAFVDMYSKCGCLNLACQVFDKMPENDRDSFCYTAMIGGFAVHGYGNQAL 454
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
EL+ MK + P+ TF+ + AC+H G+VE+G F M+ VHG++P HY + D+
Sbjct: 455 ELYRKMKFKGLVPDSATFVVTMFACSHVGLVEEGLEIFKSMKEVHGVEPKLEHYGCLIDL 514
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGS 436
L RAG LKEA ++ +MP +PN ++ R+LL A+ IH GVG +L+ELEP S
Sbjct: 515 LGRAGRLKEAEEWLADMPMKPNAVLWRSLLGAARIHG---NLGVGEVALTKLIELEPETS 571
Query: 437 QNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELA 496
N V+++N YA VG V VR+ MK+ G+ K+ G S VE+ G++H F +G S
Sbjct: 572 GNYVLLSNMYASVGRVNDVKRVRKLMKHHGVNKLPGFSLVEIKGAMHEFLTGDRSHPFSK 631
Query: 497 GIYQILETLN 506
IY + +N
Sbjct: 632 EIYLKIAEIN 641
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 160/466 (34%), Positives = 251/466 (53%), Gaps = 7/466 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+IH ++ SG D+ I LV +L A + +V + WN++I GY
Sbjct: 228 EIHEELINSGFLLDSFISSALVDM--YGKCGHLEMAIEVFEQMPKKTV-VAWNSMISGYG 284
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ +F M G+KPT T ++ C+ + L EG V ++ + SDV+
Sbjct: 285 LKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVF 344
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N++L+ Y C + A +F + + VVSWNV+I+ V L EA+G F +M+
Sbjct: 345 INSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSY 404
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
EPD T VL+AC++L L G+ +H +IE+ N + AL+DMYAKCGAV A
Sbjct: 405 VEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAF 464
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F + + ++ +W++MI HG A ALELF+ M S++ P+ VTFL +L AC HAG
Sbjct: 465 SVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAG 524
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP-FQPNPIVLRA 404
+V++G YF++M +V+GI P HY + D+L RAG L EAY + P + + +L
Sbjct: 525 LVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLST 584
Query: 405 LLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKN 464
L SA +H +G E+ R L++ +P S ++++N YA W++V VR MK
Sbjct: 585 LFSACRLHR---NIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKE 641
Query: 465 VGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+GLKK G SW+E+ I F+ +S + L +++ L L+ HM+
Sbjct: 642 LGLKKNPGCSWIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHME 687
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 212/437 (48%), Gaps = 11/437 (2%)
Query: 28 ARQCLSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSI 84
R+ L L+ C + K L Q IH ++ GLQND + K L+ S +A+ +
Sbjct: 3 TRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYL--SCHLYDHAKCV 60
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEIS 143
N N WN L+ GY + EA+ +F + +KP +TYP VLKAC +
Sbjct: 61 FDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLY 120
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
G + + K+GL D+ ++LV Y C A +F++M E+ V WN +I+
Sbjct: 121 KYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVIS 180
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
++ EA+ YF M+ GFEP+ T+ +S+C L +L+ G +H +LI G +L
Sbjct: 181 CYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLL 240
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
+ + +AL+DMY KCG + A +F +M + V W++MI G G + ++LF M
Sbjct: 241 DSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMY 300
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
N + P T ++ C+ + + +G ++ H + I+ ++ D+ + G +
Sbjct: 301 NEGVKPTLTTLSSLIMVCSRSARLLEG-KFVHGYTIRNRIQSDVFINSSLMDLYFKCGKV 359
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVG--NEVRRRLLELEPRGSQNLVI 441
+ A +P + +V ++ + + + K + +G +E+R+ +E + +++
Sbjct: 360 ELAENIFKLIP--KSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLT 417
Query: 442 VANKYAEVGMWEKVSNV 458
++ A + E++ N+
Sbjct: 418 ACSQLAALEKGEEIHNL 434
>gi|357521772|ref|XP_003612377.1| Selenium binding protein-like protein [Medicago truncatula]
gi|355513712|gb|AES95335.1| Selenium binding protein-like protein [Medicago truncatula]
Length = 611
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 164/447 (36%), Positives = 244/447 (54%), Gaps = 29/447 (6%)
Query: 61 QILKELVRFCTLSS--SKNLTYARSILCNYVN-----------DSVP----IPWNNLIRG 103
Q+ + V C L S N+ A +L YV D +P + W LI G
Sbjct: 123 QVSGKCVHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCLING 182
Query: 104 YAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD 163
Y +D+PREA+ VF +M R G++ E T L ACA ++ G V V K+G D
Sbjct: 183 YVINDQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKAGYDPF 242
Query: 164 VYTNNN-------LVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
V+ +N+ +V Y C A ++F+ M ER++V+WN +I + EA+G
Sbjct: 243 VFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYERYNEALG 302
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F M GF PD+ T L VLS C L+LG+ VH L++ + L TAL+DMYA
Sbjct: 303 LFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKSNMAKDIALATALLDMYA 362
Query: 277 KCGAVGCARLLFSR-MEEINVWTWSAMILGLAQHGYAEEALELFSNMK-NSSISPNYVTF 334
K G +G A+ +F+ +E+ +V W++MI LA HG+ EAL LF M+ +SS+ P+++T+
Sbjct: 363 KNGELGSAQKIFNNSLEKKDVVMWTSMINALAIHGHGNEALSLFQIMQEDSSLVPDHITY 422
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+GVL AC+H G+VE+ + F+ M +GI P + HY M D+L+RAGH +EA + M
Sbjct: 423 IGVLFACSHVGLVEEAQKQFNLMTKSYGILPEKEHYSCMVDLLSRAGHFREAEKLMETMS 482
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
+PN + ALL+ IH+ V ++V+ RL ELEP S +++N YA G WE+
Sbjct: 483 IRPNIAIWGALLNGCQIHE---NIPVASQVKVRLAELEPIQSGIYALLSNIYANSGKWEE 539
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGS 481
V+ R+ MK+ + K G S VE+ S
Sbjct: 540 VNRTRKMMKHKRIAKTIGHSSVEMKVS 566
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 123/405 (30%), Positives = 195/405 (48%), Gaps = 24/405 (5%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQI--LKELVRFCTLSSSKNLTYARSILCNYV 89
LS L C + HA I + + +I L +L+ FC S ++L +
Sbjct: 8 LSLLPKCKTLLQFKTSHALILTTPTTINTKIIPLSKLIDFCVDSHFDEYFNYANLLFRQI 67
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+ +N++I+GYA S+ P ++ ++ M + G P FT+PFVLKAC+ I G
Sbjct: 68 HSPNVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGYSPDHFTFPFVLKACSFIYDQVSGK 127
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
V + + KSG +++VY L+ Y C+ KVFD + + +VV+W +I V N
Sbjct: 128 CVHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCLINGYVIND 187
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG-------TV 262
EA+ F +M G E +E TM+ L AC ++ G+WVH ++ + G +
Sbjct: 188 QPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKAGYDPFVFASN 247
Query: 263 LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM 322
N L TA+++MYAKCG + AR LF++M E N+ W+ MI Q+ EAL LF M
Sbjct: 248 SNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYERYNEALGLFFYM 307
Query: 323 KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMA----DILA 378
+ P+ TFL VL C ++ G E H + +K +A D+ A
Sbjct: 308 LANGFCPDKATFLSVLSVCARRCVLALG-----ETVHAYLLKSNMAKDIALATALLDMYA 362
Query: 379 RAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNE 423
+ G L A N + + ++ ++++A +IH G GNE
Sbjct: 363 KNGELGSAQKIFNNSLEKKDVVMWTSMINALAIH------GHGNE 401
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 150/428 (35%), Positives = 226/428 (52%), Gaps = 16/428 (3%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN LI GY +A+ V+ M+ G+KP + T ++ +CA + LN G +
Sbjct: 148 VSWNCLINGYKKIGEGEKAIEVYKVMESEGVKPDDVTMIGLVSSCAMLGDLNRGKEFYEY 207
Query: 155 VTKSGLDSDVYTNNNLVRFYGSC------RRKRD-------ACKVFDDMCERSVVSWNVI 201
V +GL + N L+ + C RR D K+FDDM E+ VV WN +
Sbjct: 208 VKANGLRMTIPLANALMDMFSKCGDIHEARRIFDNLEKRTIVSKLFDDMEEKDVVMWNAM 267
Query: 202 ITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGT 261
I V+ +A+ F +M+ +PDE TM+ LSAC++LG L +G W+H + +
Sbjct: 268 IGGSVQAKRSQDALALFQEMQTSNTDPDEITMIHCLSACSQLGALDVGIWIHRYIEKHSL 327
Query: 262 VLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSN 321
LN LGT+L+DMYAKCG + A +F ++ N T++A+I GLA HG A A+ F+
Sbjct: 328 SLNVALGTSLVDMYAKCGNISEALCVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNE 387
Query: 322 MKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAG 381
M ++ I+P+ +TF+G+L AC H GM++ G YF +M+ + P HY M D+L RAG
Sbjct: 388 MIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAG 447
Query: 382 HLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVI 441
L+EA + +MP + + V ALL +H +G + ++LLEL+P S V+
Sbjct: 448 LLEEADKLMESMPMEADAAVWGALLFGCRMHG---NVKLGEKAAKKLLELDPSDSGIYVL 504
Query: 442 VANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQI 501
+ Y E MWE RR M G++K+ G S +E+ G + F S+ E IY
Sbjct: 505 LDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVSEFIVRDKSRPESEKIYDC 564
Query: 502 LETLNLHM 509
L L HM
Sbjct: 565 LHCLGTHM 572
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 190/377 (50%), Gaps = 21/377 (5%)
Query: 53 VSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPRE 112
++GL D L+ FC LS S+ L Y IL N + WN IRG++ S+ P++
Sbjct: 3 ITGLVLDPFASSRLIAFCALSESRYLNYCVKILKGIENPNA-FSWNVTIRGFSESENPKD 61
Query: 113 AVWVFIDMKRRGI---KPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNN 169
AV + M RRG +P FTYP + K CA++ + G + +V K L+ + +N
Sbjct: 62 AVLAYKQMLRRGCCESRPDHFTYPVLFKVCADLRLNSLGHMILGHVFKLRLELVSHVHNA 121
Query: 170 LVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE-AVGYFVKMKDLGFEP 228
+ + SC +A KVFD+ R +VSWN +I + + GE A+ + M+ G +P
Sbjct: 122 SIHMFASCGEMENARKVFDESPVRDLVSWNCLIN-GYKKIGEGEKAIEVYKVMESEGVKP 180
Query: 229 DETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL-- 286
D+ TM+ ++S+C LG+L+ GK + + G + L AL+DM++KCG + AR
Sbjct: 181 DDVTMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLANALMDMFSKCGDIHEARRIF 240
Query: 287 -----------LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFL 335
LF MEE +V W+AMI G Q +++AL LF M+ S+ P+ +T +
Sbjct: 241 DNLEKRTIVSKLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQTSNTDPDEITMI 300
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPF 395
L AC+ G ++ G + H H + ++ D+ A+ G++ EA +
Sbjct: 301 HCLSACSQLGALDVGI-WIHRYIEKHSLSLNVALGTSLVDMYAKCGNISEALCVFHGIQT 359
Query: 396 QPNPIVLRALLSASSIH 412
+ N + A++ ++H
Sbjct: 360 R-NSLTYTAIIGGLALH 375
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 168/498 (33%), Positives = 256/498 (51%), Gaps = 21/498 (4%)
Query: 15 PKP---SNCNSDLLSK--ARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRF 69
PKP SN N L +Q +S L+ + IHAQ+ +G D ++ EL+R
Sbjct: 21 PKPHPNSNSNPKSLKSLDQKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRS 80
Query: 70 CTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTE 129
C S + YA I Y ++ + LI G+ S EA+ ++ M I P
Sbjct: 81 C--SKCHAIDYASRIF-QYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDN 137
Query: 130 FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD 189
+ +LKAC L EG +V + K G S+ ++ YG C DA +VF++
Sbjct: 138 YLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEE 197
Query: 190 MCE----RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGN 245
M E + V W +I V N A+ F M+ P+E T++ VLSAC++LG
Sbjct: 198 MPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGA 257
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
L +G+WVH + + LN +G ALI+MY++CG++ A+ +F M++ +V T++ MI G
Sbjct: 258 LEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISG 317
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKP 365
L+ +G + +A+ELF M + P VTF+GVL AC+H G+V+ G+ FH M + ++P
Sbjct: 318 LSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEP 377
Query: 366 MRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVR 425
HY M D+L R G L+EAY I M P+ I+L LLSA +H +G +V
Sbjct: 378 QIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHK---NLELGEQVA 434
Query: 426 RRLLELEPRG---SQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSI 482
+ ELE RG S V++++ YA G W++ + VR MK G++K G S +E+ I
Sbjct: 435 K---ELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEI 491
Query: 483 HRFYSGYDSQVELAGIYQ 500
H F G + IY+
Sbjct: 492 HEFLLGDLRHPQKERIYE 509
>gi|297829948|ref|XP_002882856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328696|gb|EFH59115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 753
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 152/450 (33%), Positives = 233/450 (51%), Gaps = 26/450 (5%)
Query: 63 LKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDR-----PREAVWVF 117
LKE ++ +L +KN+ + +N +I G+ D EA +F
Sbjct: 304 LKEAIKLFSLMPAKNV----------------VTYNAMISGFLQMDDITDEASSEAFKLF 347
Query: 118 IDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSC 177
++M+RRG++P+ T+ VLKAC+ L G Q+ A + K+ SD + + L+ Y
Sbjct: 348 MEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALM 407
Query: 178 RRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVL 237
D + F ++ + SW II V+N L A F ++ P+E T+ +++
Sbjct: 408 GSTEDGMQCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSLMM 467
Query: 238 SACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVW 297
SAC + LS G+ + I+ G + T+ I MYAK G + A +F ++ +V
Sbjct: 468 SACADFAALSSGEQIQGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIEVQNPDVA 527
Query: 298 TWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM 357
T+SAMI LAQHG A +AL +F +MK I PN FLGVL AC H G+V G YF M
Sbjct: 528 TYSAMISSLAQHGSAHDALNIFESMKTRGIKPNQQAFLGVLIACCHGGLVTHGVNYFQTM 587
Query: 358 EHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQ 417
++ +GI P H+ +AD+L R G L +A I++ FQ +P++ RALLS+ + Y+
Sbjct: 588 KNSYGINPNEKHFTCLADLLGRTGRLSDAENLILSSGFQDHPVMWRALLSSCRV----YK 643
Query: 418 DGV-GNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWV 476
D V G V RL+ELEP S + V++ N Y + G+ VR M++ G+KK +SW+
Sbjct: 644 DSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWI 703
Query: 477 ELGGSIHRFYSGYDSQVELAGIYQILETLN 506
LG H F S IY +L+T+N
Sbjct: 704 VLGNQTHSFAVADWSHPSSQMIYTMLDTMN 733
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 136/294 (46%), Gaps = 18/294 (6%)
Query: 76 KNLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFT 131
+ L +AR + D +P I +N+LI GY +A+ +F++ + +K +FT
Sbjct: 97 RELGFARQLF-----DRMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFT 151
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
Y L C E L+ G + V +GL V+ N L+ Y C + A +FD
Sbjct: 152 YAGALGFCGERCDLDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCN 211
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC---TELGNLSL 248
ER VSWN +I+ V E + KM G + + VL AC G +
Sbjct: 212 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLMEK 271
Query: 249 GKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ 308
G +H + G + + TAL+DMYAK G++ A LFS M NV T++AMI G Q
Sbjct: 272 GMAIHCYAAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQ 331
Query: 309 HG-----YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM 357
+ EA +LF M+ + P+ TF VL AC+ A +E G R H +
Sbjct: 332 MDDITDEASSEAFKLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEYG-RQIHAL 384
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 145/308 (47%), Gaps = 6/308 (1%)
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
Y + + A+ L G ++ KS L+ +Y NNL+ Y CR A ++FD M
Sbjct: 50 AYKKLFQTAAKSGSLVLGKLAHGHMVKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRM 109
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
ER+++S+N +I+ + + +A+ F++ +D + D+ T L C E +L GK
Sbjct: 110 PERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGERCDLDFGK 169
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
+H ++ G L LIDMY+KCG + A LF R E + +W+++I G + G
Sbjct: 170 LLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLISGYVRVG 229
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACN---HAGMVEDGYRYFHEMEHVHGIKPMR 367
AEE L L + M + + VL AC + G++E G H G++
Sbjct: 230 AAEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLMEKGMA-IHCYAAKLGMEFDI 288
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRR 427
+ + D+ A+ G LKEA MP + N + A++S D D +E +
Sbjct: 289 VVRTALLDMYAKNGSLKEAIKLFSLMPAK-NVVTYNAMISGFLQMD-DITDEASSEAFKL 346
Query: 428 LLELEPRG 435
+E++ RG
Sbjct: 347 FMEMQRRG 354
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 149/428 (34%), Positives = 226/428 (52%), Gaps = 10/428 (2%)
Query: 88 YVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS 143
+V D +P + W LI GYA + P EA+ + DM R +P FT+ +LKA
Sbjct: 13 HVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACG 72
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
G + G Q+ A K D DVY + L+ Y C + A VFD + ++ VSWN +I
Sbjct: 73 GCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIA 132
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
+ F +M+ GF T + SA +G L G+WVH LI+ G L
Sbjct: 133 GFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKL 192
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
+G ++ MYAK G++ AR +F RM++ ++ TW+ M+ LAQ+G +EA+ F ++
Sbjct: 193 TAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIR 252
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
I N +TFL VL AC+H G+V++G YF M+ + ++P HY + D+L RAG L
Sbjct: 253 KCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKD-YNVQPEIDHYVSFVDLLGRAGLL 311
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIV 442
KEA F+ MP +P V ALL A +H +AK +G + EL+P + V++
Sbjct: 312 KEALIFVFKMPMEPTAAVWGALLGACRMHKNAK----MGQYAADHVFELDPDDTGPPVLL 367
Query: 443 ANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQIL 502
N YA G W + VR+ MK G+KK SWV++ S+H F + D+ + IY++
Sbjct: 368 YNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMW 427
Query: 503 ETLNLHMK 510
E +N+ +K
Sbjct: 428 EEINMRIK 435
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 8/264 (3%)
Query: 174 YGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTM 233
Y C DA VFD M R VVSW +I +N EA+G M F P+ T
Sbjct: 2 YCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTF 61
Query: 234 LVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEE 293
+L A G S+G+ +H ++ + +G+AL+DMYA+C + A ++F R+
Sbjct: 62 TSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVS 121
Query: 294 INVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRY 353
N +W+A+I G A+ E L F+ M+ + + T+ + A G +E G R+
Sbjct: 122 KNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQG-RW 180
Query: 354 FHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHD 413
H G K +TM + A++G + +A M R L++ +++
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMD-------KRDLVTWNTMLT 233
Query: 414 AKYQDGVGNEVRRRLLELEPRGSQ 437
A Q G+G E E+ G Q
Sbjct: 234 ALAQYGLGKEAVAHFEEIRKCGIQ 257
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MY KCGAV AR +F +M +V +W+ +I G AQ+ EA+ L +M + PN T
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 334 FLGVLCACNHAG 345
F +L A G
Sbjct: 61 FTSLLKATGACG 72
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 168/519 (32%), Positives = 255/519 (49%), Gaps = 47/519 (9%)
Query: 32 LSFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILCN 87
+S L C + + L +IH+ I GL+ D + L+ +C + ++ AR
Sbjct: 284 VSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQD---ARETFDR 340
Query: 88 YVNDSVPIPWNNLIRGYAWS-----DRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI 142
V I W+ +I GYA S + E + M+R G+ P + T+ +LKAC+
Sbjct: 341 MSKRDV-ISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVH 399
Query: 143 SGLNEGMQVQANVTKSGLDSD----------------VYT---------NNNLVRF---- 173
L +G Q+ A ++K G +SD +Y N N+V +
Sbjct: 400 GALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLL 459
Query: 174 --YGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDET 231
Y C A KVF +M R+VVSWN++I ++ + + MK GF+PD
Sbjct: 460 TMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRV 519
Query: 232 TMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM 291
T++ +L AC L L GK VH + ++ G + + T+LI MY+KCG V AR +F ++
Sbjct: 520 TIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKI 579
Query: 292 EEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGY 351
+ W+AM+ G QHG EA++LF M + PN +TF V+ AC AG+V++G
Sbjct: 580 SNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGR 639
Query: 352 RYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSI 411
F M+ +KP + HY M D+L RAG L+EA FI MP +P+ V ALL A
Sbjct: 640 EIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKS 699
Query: 412 HDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMK 471
HD + +L LEP + V ++N YA+ G W+ + VR+ M + GLKK +
Sbjct: 700 HD---NVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDR 756
Query: 472 GMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
G S +E+ G IH F + + E+ I+ LE L MK
Sbjct: 757 GESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMK 795
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/369 (30%), Positives = 178/369 (48%), Gaps = 16/369 (4%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTL---SSSKNLTYARSILCNYVNDSVPIPWNNLIRG 103
+H Q+ GL D + L+ F + +S + R L + V W+++I
Sbjct: 100 VHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVT------WSSMIAA 153
Query: 104 YAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD 163
YA ++ P +A F MK I+P T+ +LKAC S L + ++ V SG+++D
Sbjct: 154 YAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETD 213
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
V L+ Y C AC++F M ER+VVSW II ++ L EA + KM
Sbjct: 214 VAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQ 273
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G P+ T + +L++C L+ G+ +H + ERG + + ALI MY KC +
Sbjct: 274 AGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQD 333
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYA-----EEALELFSNMKNSSISPNYVTFLGVL 338
AR F RM + +V +WSAMI G AQ GY +E +L M+ + PN VTF+ +L
Sbjct: 334 ARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSIL 393
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
AC+ G +E G + E+ V G + R + ++ A+ G + EA M N
Sbjct: 394 KACSVHGALEQGRQIHAEISKV-GFESDRSLQTAIFNMYAKCGSIYEAEQVFSKME-NKN 451
Query: 399 PIVLRALLS 407
+ +LL+
Sbjct: 452 VVAWASLLT 460
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 180/395 (45%), Gaps = 42/395 (10%)
Query: 109 RPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNN 168
R +EA+ + +K+RG+ TY +++ CA++ +G V + + GL D+Y N
Sbjct: 58 RLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGN 117
Query: 169 NLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEP 228
+L+ FY +VF M R VV+W+ +I N +A F +MKD EP
Sbjct: 118 SLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEP 177
Query: 229 DETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLF 288
+ T L +L AC L + +H + G + + TALI MY+KCG + A +F
Sbjct: 178 NRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIF 237
Query: 289 SRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVE 348
+M+E NV +W+A+I AQH EA EL+ M + ISPN VTF+ +L +CN +
Sbjct: 238 QKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALN 297
Query: 349 DGYRYFHEMEH-------------------VHGIKPMRIHYHTMA--DIL---------A 378
G R + + I+ R + M+ D++ A
Sbjct: 298 RGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYA 357
Query: 379 RAGH-----LKEAYTFIMNMPFQ---PNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLE 430
++G+ L E + + M + PN + ++L A S+H A Q G ++ + +
Sbjct: 358 QSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQ---GRQIHAEISK 414
Query: 431 LEPRGSQNL-VIVANKYAEVGMWEKVSNVRRFMKN 464
+ ++L + N YA+ G + V M+N
Sbjct: 415 VGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMEN 449
>gi|357520897|ref|XP_003630737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524759|gb|AET05213.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 447
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/431 (35%), Positives = 229/431 (53%), Gaps = 12/431 (2%)
Query: 50 QIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV-NDSVPIPWNNLIRGYAWSD 108
Q ++ + ++ L+ T N YA +L ++ ++ WNN+IR Y +
Sbjct: 17 QHSITSGNDPVTVIATLLSNTTRIRDLNQIYAHILLTRFLESNPASFNWNNIIRSYTRLE 76
Query: 109 RPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNN 168
P+ A+ +++ M R G+ P +T P VLKA ++ + G QV + K GL S+ Y +
Sbjct: 77 SPQNALRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQVHSYGIKLGLQSNEYCES 136
Query: 169 NLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEP 228
+ Y A KVFD+ E + SWN +I+ + +A+ FV MK GFEP
Sbjct: 137 GFINLYCKAGDFDSAHKVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEP 196
Query: 229 DETTMLVVLSACTELGNLSLGKWVHLQLIERGT-----VLNCQLGTALIDMYAKCGAVGC 283
D TM+ V+SAC +G+L L +H + + T +L + +LIDMY KCG +
Sbjct: 197 DGITMVSVMSACGSIGDLYLALQLHKYVFQAKTNEWTVIL---MSNSLIDMYGKCGRMDL 253
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A +F+ ME+ NV +W++MI+G A HG+A+EAL F M+ S + PNYVTF+GVL AC H
Sbjct: 254 AYEVFATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVH 313
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
G V++G YF M++++GI P HY M D+L RAG +A + MP +PN +V
Sbjct: 314 GGTVQEGRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVEEMPMKPNSVVWG 373
Query: 404 ALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMK 463
L+ A H + V L LEP V+++N YA G+W++V +R FMK
Sbjct: 374 CLMGACEKHG---NVDMAEWVAENLQALEPWNEGVYVVLSNIYANKGLWKEVERIRSFMK 430
Query: 464 NVGLKKMKGMS 474
L K+ S
Sbjct: 431 EGRLAKIPAYS 441
>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/435 (33%), Positives = 228/435 (52%), Gaps = 30/435 (6%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I + ++ + + + + M R G++P E+T+ VLKACA S LN GM++
Sbjct: 450 VSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAGDS-LNHGMEIHTT 508
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVF--------------------------- 187
+ K G+ S+ Y ++LV Y C +A K+
Sbjct: 509 IVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQ 568
Query: 188 DDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLS 247
D + +VSWN II+ V +A +F +M ++G PD+ T VL C L ++
Sbjct: 569 DRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIG 628
Query: 248 LGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA 307
LGK +H +I++ + + + L+DMY+KCG + +RL+F + + TW+AMI G A
Sbjct: 629 LGKQIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYA 688
Query: 308 QHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
HG EEA++LF +M +I PN+ TF+ +L AC H G+VE G YFH M+ +G+ P
Sbjct: 689 HHGMGEEAIKLFESMVLMNIMPNHATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRL 748
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRR 427
HY M DIL ++G +++A I MPF+ + ++ R LLSA I+ +
Sbjct: 749 EHYSNMVDILGKSGEVEKALELIQEMPFEADDVIWRTLLSACKIN--RNNVEAAEVAANA 806
Query: 428 LLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYS 487
LL L+P+ S ++++N YA+ GMW+K S +R M++ LKK G SWVE+ H F
Sbjct: 807 LLRLDPQDSSTYILLSNIYADAGMWDKASELRTAMRSDKLKKEPGCSWVEIRDEFHTFLV 866
Query: 488 GYDSQVELAGIYQIL 502
G + IY L
Sbjct: 867 GDKAHPRWKEIYNGL 881
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 185/411 (45%), Gaps = 66/411 (16%)
Query: 33 SFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDS 92
S LK C + L ++ Q+ L++D + +VR TL YA+ CN + D+
Sbjct: 287 SVLKSCATLPDL-RLGTQLHAHALKSDF-VKDGIVRTATLD-----MYAK---CNNMQDA 336
Query: 93 VPI----------PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI 142
+ +N +I GY+ D A+ +F + + + E + L+ACA +
Sbjct: 337 QRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATV 396
Query: 143 SGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII 202
GL+EG+Q+ TKS ++ N + YG C +AC+VFD+M + VSWN II
Sbjct: 397 KGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAII 456
Query: 203 TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV 262
+N + + V M G EPDE T VL AC +L+ G +H +++ G
Sbjct: 457 AAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLGMA 515
Query: 263 LNCQLGTALIDMYAKCGAVGCARLLFS----------------------------RMEEI 294
N +G++L+DMY+KCG + A + + R++E+
Sbjct: 516 SNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEM 575
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYF 354
V +W+A+I G +E+A F+ M I+P+ T+ VL C + + G +
Sbjct: 576 IV-SWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQI- 633
Query: 355 HEMEHVHGIKPMRIHYH-----TMADILARAGHLKEAYTFIMNMPFQPNPI 400
H H IK + Y T+ D+ ++ G+L ++ + F+ PI
Sbjct: 634 ----HAHVIKK-ELQYDVYICSTLVDMYSKCGNLHDS-----RLMFEKAPI 674
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 137/258 (53%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN+++ G+ + E+V VFI+M R G++ ++ +LK C+ + G Q+
Sbjct: 147 VSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGI 206
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ G D+DV + + L+ Y C+R ++ VF M +++ +SW+ II CV+N +L
Sbjct: 207 ALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGG 266
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M+ +G ++ VL +C L +L LG +H ++ V + + TA +DM
Sbjct: 267 LKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDM 326
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKC + A+ LF E +N+ +++AMI G +Q AL LF + SS+ + ++
Sbjct: 327 YAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISL 386
Query: 335 LGVLCACNHAGMVEDGYR 352
G L AC + +G +
Sbjct: 387 SGALRACATVKGLSEGLQ 404
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 31/241 (12%)
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
+ FV K CA+ G Q A++ SG V+ +N L++ Y +C A K+FD M
Sbjct: 52 FSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMP 111
Query: 192 ERSVVSWNVII------------TVCVENL-------WLG------------EAVGYFVK 220
R VVSWN +I ++C E + W E+V F++
Sbjct: 112 LRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIE 171
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
M G E D + V+L C+ L N LG +H + G + G+AL+DMYAKC
Sbjct: 172 MGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKR 231
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
+ + +F M + N +WSA+I G Q+ + + L++F M+ + + + VL +
Sbjct: 232 LDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKS 291
Query: 341 C 341
C
Sbjct: 292 C 292
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 165/465 (35%), Positives = 243/465 (52%), Gaps = 8/465 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIHA + G + D ++ L+ F T + R + V ++ I W +I GY
Sbjct: 273 QIHAYVLRRGTEMDVSVVNVLIDFYT--KCNRVKAGRKLFDQMVVKNI-ISWTTMISGYM 329
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ EA+ +F +M R G KP F VL +C L +G QV A K+ L+SD +
Sbjct: 330 QNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEF 389
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N L+ Y DA KVFD M E++V+S+N +I L EA+ F +M+
Sbjct: 390 VKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRL 449
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+P+E T +++A + L +L G+ H QL++ G + AL+DMYAKCG++ AR
Sbjct: 450 QKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEAR 509
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F+ +V W++MI AQHG AEEAL +F M I PNYVTF+ VL AC+HAG
Sbjct: 510 KMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAG 569
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
VEDG +F+ M GIKP HY + +L R+G L EA FI MP +P IV R+L
Sbjct: 570 RVEDGLNHFNSMPGF-GIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSL 628
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
LSA I +G + +P+ S + ++++N +A GMW V VR M +
Sbjct: 629 LSACRIAG---NVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSS 685
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+ K G SW+E+ ++ F + D+ A I +L+ L H+K
Sbjct: 686 EVVKEPGRSWIEVNNKVNVFIA-RDTTHREADIGSVLDILIQHIK 729
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 192/396 (48%), Gaps = 17/396 (4%)
Query: 23 DLLSKARQCLSFLKLCCSKK---HLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLT 79
+L K R+ + L+L S+ H IH QI VSGLQ+D + L+ C S S +
Sbjct: 44 NLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVC--SKSDRVD 101
Query: 80 YARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRR-GIKPTEFTYPF 134
AR + D +P I W++++ Y+ EA+ VF+D++R+ G P EF
Sbjct: 102 NARVVF-----DKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLAS 156
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
V++AC ++ + +G Q+ V +SG D DVY +L+ FY +A VFD + E++
Sbjct: 157 VIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKT 216
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHL 254
V+W II + ++ F +M++ PD + VLSAC+ L L GK +H
Sbjct: 217 AVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHA 276
Query: 255 QLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEE 314
++ RGT ++ + LID Y KC V R LF +M N+ +W+ MI G Q+ + E
Sbjct: 277 YVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWE 336
Query: 315 ALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMA 374
A++LF M P+ VL +C +E G R H ++ + +
Sbjct: 337 AMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQG-RQVHAYTIKANLESDEFVKNGLI 395
Query: 375 DILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASS 410
D+ A++ L +A + ++ + N I A++ S
Sbjct: 396 DMYAKSNLLIDAKK-VFDVMAEQNVISYNAMIEGYS 430
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 189/409 (46%), Gaps = 39/409 (9%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+H + SG D + L+ F S + N+ AR ++ + +++ + W +I GY
Sbjct: 172 QLHGFVVRSGFDQDVYVGTSLIDF--YSKNGNIEEAR-LVFDQLSEKTAVTWTTIIAGYT 228
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
R ++ +F M+ + P + VL AC+ + L G Q+ A V + G + DV
Sbjct: 229 KCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVS 288
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N L+ FY C R + K+FD M ++++SW +I+ ++N + EA+ F +M LG
Sbjct: 289 VVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLG 348
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
++PD VL++C L G+ VH I+ + + LIDMYAK + A+
Sbjct: 349 WKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAK 408
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F M E NV +++AMI G + EALELF M+ PN TF ++ A ++
Sbjct: 409 KVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLA 468
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA------------------- 386
+ G ++ +++ + G+ + + D+ A+ G ++EA
Sbjct: 469 SLRHGQQFHNQLVKM-GLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMI 527
Query: 387 ---------------YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGV 420
+ +M QPN + A+LSA S H + +DG+
Sbjct: 528 STHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACS-HAGRVEDGL 575
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 154/456 (33%), Positives = 229/456 (50%), Gaps = 39/456 (8%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGI-KPTEFTYPFVLKACAEISGLNEGMQVQA 153
I WN L+ G S R R+AV M G+ +P L A ++ ++ G Q+
Sbjct: 122 ITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHG 181
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD---------------------MCE 192
K+G +D L+ YG C + + +VFD+ +CE
Sbjct: 182 YAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCE 241
Query: 193 R--------------SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
+VVSW I+ CV+N EAV +F +M+ G EP+ T+ VL
Sbjct: 242 ALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLP 301
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
A + L G+ H + +G + + + +AL+DMYAKCG V AR++F M NV +
Sbjct: 302 AFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVS 361
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
W+AMI G A +G A A+ +F +M P+ VTF +L AC AG+ E+G YF EM
Sbjct: 362 WNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMH 421
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD 418
+ +G+ P HY M +L RAG L EAY I +MPF+P+ + +LL + +H
Sbjct: 422 NEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLA 481
Query: 419 GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVEL 478
V E +L LEP + N V+++N YA MW++V+ VR MK+VGLKK KG SW+E+
Sbjct: 482 EVAAE---KLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEI 538
Query: 479 GGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+H +G DS + I + + LN+ M+ L F
Sbjct: 539 KNKVHMLLAGDDSHPMMTAIIEKINQLNIQMRKLGF 574
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 134/315 (42%), Gaps = 19/315 (6%)
Query: 23 DLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYAR 82
D+ K Q +++ H+ ++GL +AQ+ + L F R
Sbjct: 200 DMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVD-------R 252
Query: 83 SILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI 142
+ N V+ W +++ + + EAV F +M+ +G +P T P VL A A +
Sbjct: 253 GVELNVVS------WTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANV 306
Query: 143 SGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII 202
+ L G + G DVY ++ LV Y C R +DA +FD M R+VVSWN +I
Sbjct: 307 AALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMI 366
Query: 203 TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLI-ERGT 261
AV F M +PD T +L+ACT+ G G+ ++ E G
Sbjct: 367 GGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGV 426
Query: 262 VLNCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHG---YAEEALE 317
+ ++ + + G + A L S M E + + W +++ HG AE A E
Sbjct: 427 SPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAE 486
Query: 318 LFSNMKNSSISPNYV 332
+++ + + NYV
Sbjct: 487 KLFHLEPEN-AGNYV 500
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 134/314 (42%), Gaps = 36/314 (11%)
Query: 127 PTEF----TYPFV--LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRK 180
PT F T P L A AE+SGL V +++ + L T N F G R +
Sbjct: 24 PTAFKSCPTLPLARALHAVAEVSGLARDPFVASSLLHAYLRLGT-TGNARALFDGMPRPQ 82
Query: 181 RD-------------------ACKVFDDM-----CERSVVSWNVIITVCVENLWLGEAVG 216
R A ++ ++M E +V++WN +++ + +AV
Sbjct: 83 RTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVV 142
Query: 217 YFVKMKDLGF-EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY 275
M G PD T + LSA ++G +S+G+ +H ++ G + + TALIDMY
Sbjct: 143 ALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMY 202
Query: 276 AKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFL 335
KCG +F ++V + +A+I GL+++ EAL LF + + N V++
Sbjct: 203 GKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWT 262
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAG---HLKEAYTFIMN 392
++ C G + +F EM+ G +P + + A H + A+ F +
Sbjct: 263 SIVACCVQNGKDLEAVEFFREMQ-AQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALR 321
Query: 393 MPFQPNPIVLRALL 406
F + V AL+
Sbjct: 322 KGFLHDVYVSSALV 335
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
++ + F PD + +C L L + +H G + + ++L+ Y + G
Sbjct: 11 LRHVSFPPDPHLLPTAFKSCP---TLPLARALHAVAEVSGLARDPFVASSLLHAYLRLGT 67
Query: 281 VGCARLLFSRME--EINVWTWSAMILGLAQHGYAEEALELFSNMK-NSSISPNYVTFLGV 337
G AR LF M + V WSA++ A G AE A L M+ + + PN +T+ G+
Sbjct: 68 TGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGL 127
Query: 338 LCACNHAGMVEDG 350
+ N +G D
Sbjct: 128 VSGLNRSGRARDA 140
>gi|359476090|ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Vitis vinifera]
Length = 515
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 164/506 (32%), Positives = 253/506 (50%), Gaps = 42/506 (8%)
Query: 44 LYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRG 103
L +IHA + L + ++ ++V C T ++L V D +N +IR
Sbjct: 4 LKKIHAHVVKFSLSXSSFLVTKMVDMCNHHGE---TEYANLLFKRVADPNAFLYNAMIRA 60
Query: 104 YAWSDRPREAVWVFIDM-----KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
Y + A+ V M P +FT+PFV+K CA + N G QV + K
Sbjct: 61 YKHNKVYILAITVHKQMLGHSHGENPXFPDKFTFPFVVKXCAGLMCYNLGKQVHGHAFKF 120
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT------------VCV 206
G S+ N+LV Y C DA +VF++M ER VSWN +I+
Sbjct: 121 GPKSNTVIENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRARAIF 180
Query: 207 ENL-------WLGEAVGY------------FVKMKDLGFEPDETTMLVVLSACTELGNLS 247
E L W GY F +M+ + E DE +++ VL AC +LG L
Sbjct: 181 EELQDKTIFSWTAIVSGYARIGCHAVALEFFRRMQMVDIELDEISLVSVLPACAQLGALE 240
Query: 248 LGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA 307
LGKW+H+ + G + + + ALI++YAK G++ R LF +M E +V +WS MI+GLA
Sbjct: 241 LGKWIHIYADKAGFLRDICVCNALIEVYAKRGSMDEGRRLFHKMNERDVISWSTMIVGLA 300
Query: 308 QHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
HG A EA+ELF M+ + + PN +TF+G+L AC HAG++ +G YF ME I+P
Sbjct: 301 NHGRAREAIELFQEMQKAKVEPNIITFVGLLSACAHAGLLNEGLGYFESMERDDNIEPGV 360
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRR 427
HY + ++L +G L +A I MP +P+ + L S+ H + E
Sbjct: 361 EHYGCLVNLLGLSGRLDQALELIKKMPMKPDSDIWGLLSSSCRSHGNLEIVAIAME---H 417
Query: 428 LLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYS 487
LLELEP + N + ++N YA++G W+ VS +R+ M + + K G S +E+ + + S
Sbjct: 418 LLELEPDDTGNYITLSNLYADLGKWDGVSRMRKLMSSKYMNKTPGCSSIEVDNMVQEYAS 477
Query: 488 GYDSQVELAGIYQILETLNLHMKVLN 513
G DS+ IY++L+ L +H ++
Sbjct: 478 GDDSKPFSKAIYRVLKLLVMHQSKMD 503
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/459 (31%), Positives = 233/459 (50%), Gaps = 39/459 (8%)
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P I W +I GYA + R EA+ + ++ R G+ P+ + + AC+ I L
Sbjct: 377 DKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALE 436
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G QV + K G + + N L+ YG CR A +VF M + +VSWN + V
Sbjct: 437 TGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALV 496
Query: 207 ENLWLGEAVGYFVKM---KDLGFE----------------------------PDETTMLV 235
+N L EA F M D+ + P+ + +
Sbjct: 497 QNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTI 556
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
+L C LG +G+ +H I+ G + ALI MY KCG +R +F MEE +
Sbjct: 557 LLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLMEERD 615
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
++TW+ +I G AQHG EA++++ +M+++ + PN VTF+G+L AC+HAG+V++G+++F
Sbjct: 616 IFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFK 675
Query: 356 EMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAK 415
M +G+ P+ HY M D+L R G ++ A FI +MP +P+ ++ ALL A IH
Sbjct: 676 SMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNA 735
Query: 416 YQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSW 475
+G +L +EP + N V+++N Y+ +GMW +V+ VR+ MK G+ K G SW
Sbjct: 736 E---IGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSW 792
Query: 476 VELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
++ +H F +G ++ I LE L +K +
Sbjct: 793 TQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGY 831
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 130/276 (47%), Gaps = 21/276 (7%)
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC--VENLWLGEAVGYFVK 220
DV + N+++ Y + DA +F+ M ER++VSW V+I+ +EN G+A F K
Sbjct: 157 DVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIEN--HGKAWDIFCK 214
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
M G PD++ LSA LGNL + + + + ++ G + +GTA++++Y++ +
Sbjct: 215 MHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTS 274
Query: 281 V-GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
V A F M E N +TWS MI L+ G + A+ ++ SI+ G L
Sbjct: 275 VLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITG-LA 333
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
C G ++D F ++ +P+ + ++ + + G + EA MPF+ N
Sbjct: 334 QC---GRIDDARILFEQIP-----EPIVVSWNALITGYMQNGMVNEAKELFDKMPFR-NT 384
Query: 400 IVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
I +++ + Q+G E L EL G
Sbjct: 385 ISWAGMIAGYA------QNGRSEEALGLLQELHRSG 414
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 114/259 (44%), Gaps = 13/259 (5%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +I GY + +A +F M R G+ P + + L A + L+ ++
Sbjct: 190 VSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVL 249
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRD-ACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
K+G + DV ++ Y D A K F+ M ER+ +W+ +I +
Sbjct: 250 ALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDA 309
Query: 214 AVGYFVK--MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
A+ + + +K + T ++ L+ C G + + + Q+ E V AL
Sbjct: 310 AIAVYERDPVKSIAC---RTALITGLAQC---GRIDDARILFEQIPEPIVV----SWNAL 359
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
I Y + G V A+ LF +M N +W+ MI G AQ+G +EEAL L + S + P+
Sbjct: 360 ITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSL 419
Query: 332 VTFLGVLCACNHAGMVEDG 350
+ + AC++ +E G
Sbjct: 420 SSLTSIFFACSNIVALETG 438
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 135/307 (43%), Gaps = 15/307 (4%)
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
V + N L+ Y +A ++FD M R+ +SW +I +N EA+G ++
Sbjct: 353 VVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHR 412
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G P +++ + AC+ + L G VH ++ G N ALI MY KC +
Sbjct: 413 SGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEY 472
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
AR +FSRM ++ +W++ + L Q+ +EA F NM +S + V++ ++ A H
Sbjct: 473 ARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYAH 528
Query: 344 AGMVEDGYRYFHEM--EHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIV 401
A + F M EH P+ + L + ++ +T + + IV
Sbjct: 529 AEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIV 588
Query: 402 LRALLSASSIHDAKYQDGVGNEVRRRLLEL-EPRGSQNLVIVANKYAEVGMWEKVSNVRR 460
AL+S ++ G + RR+ +L E R + YA+ G+ + + +
Sbjct: 589 ANALIS------MYFKCGCADS--RRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQ 640
Query: 461 FMKNVGL 467
M++ G+
Sbjct: 641 HMESAGV 647
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 20/210 (9%)
Query: 171 VRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDE 230
+R G R +A +VFD M R +++WN +I+ N A + D +
Sbjct: 41 IRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLY----DAISGGNM 96
Query: 231 TTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSR 290
T ++LS LG + + V ++ER TV A+I Y + G + AR LF
Sbjct: 97 RTGAILLSGYGRLGRVLEARRVFDGMLERNTV----AWNAMISCYVQNGDITMARRLFDA 152
Query: 291 MEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG------------VL 338
M +V +W++M+ G +A LF M ++ V G +
Sbjct: 153 MPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIF 212
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRI 368
C + G++ D + + V G+ + +
Sbjct: 213 CKMHREGLLPDQSNFASALSAVKGLGNLDV 242
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/459 (31%), Positives = 233/459 (50%), Gaps = 39/459 (8%)
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P I W +I GYA + R EA+ + ++ R G+ P+ + + AC+ I L
Sbjct: 377 DKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALE 436
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G QV + K G + + N L+ YG CR A +VF M + +VSWN + V
Sbjct: 437 TGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALV 496
Query: 207 ENLWLGEAVGYFVKM---KDLGFE----------------------------PDETTMLV 235
+N L EA F M D+ + P+ + +
Sbjct: 497 QNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTI 556
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
+L C LG +G+ +H I+ G + ALI MY KCG +R +F MEE +
Sbjct: 557 LLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLMEERD 615
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
++TW+ +I G AQHG EA++++ +M+++ + PN VTF+G+L AC+HAG+V++G+++F
Sbjct: 616 IFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFK 675
Query: 356 EMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAK 415
M +G+ P+ HY M D+L R G ++ A FI +MP +P+ ++ ALL A IH
Sbjct: 676 SMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNA 735
Query: 416 YQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSW 475
+G +L +EP + N V+++N Y+ +GMW +V+ VR+ MK G+ K G SW
Sbjct: 736 E---IGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSW 792
Query: 476 VELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
++ +H F +G ++ I LE L +K +
Sbjct: 793 TQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGY 831
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 130/276 (47%), Gaps = 21/276 (7%)
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC--VENLWLGEAVGYFVK 220
DV + N+++ Y + DA +F+ M ER++VSW V+I+ +EN G+A F K
Sbjct: 157 DVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIEN--HGKAWDIFCK 214
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
M G PD++ LSA LGNL + + + + ++ G + +GTA++++Y++ +
Sbjct: 215 MHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTS 274
Query: 281 V-GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
V A F M E N +TWS MI L+ G + A+ ++ SI+ G L
Sbjct: 275 VLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITG-LA 333
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
C G ++D F ++ +P+ + ++ + + G + EA MPF+ N
Sbjct: 334 QC---GRIDDARILFEQIP-----EPIVVSWNALITGYMQNGMVNEAKELFDKMPFR-NT 384
Query: 400 IVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
I +++ + Q+G E L EL G
Sbjct: 385 ISWAGMIAGYA------QNGRSEEALGLLQELHRSG 414
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 114/259 (44%), Gaps = 13/259 (5%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +I GY + +A +F M R G+ P + + L A + L+ ++
Sbjct: 190 VSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVL 249
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRD-ACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
K+G + DV ++ Y D A K F+ M ER+ +W+ +I +
Sbjct: 250 ALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDA 309
Query: 214 AVGYFVK--MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
A+ + + +K + T ++ L+ C G + + + Q+ E V AL
Sbjct: 310 AIAVYERDPVKSIAC---RTALITGLAQC---GRIDDARILFEQIPEPIVV----SWNAL 359
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
I Y + G V A+ LF +M N +W+ MI G AQ+G +EEAL L + S + P+
Sbjct: 360 ITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSL 419
Query: 332 VTFLGVLCACNHAGMVEDG 350
+ + AC++ +E G
Sbjct: 420 SSLTSIFFACSNIVALETG 438
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 135/307 (43%), Gaps = 15/307 (4%)
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
V + N L+ Y +A ++FD M R+ +SW +I +N EA+G ++
Sbjct: 353 VVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHR 412
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G P +++ + AC+ + L G VH ++ G N ALI MY KC +
Sbjct: 413 SGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEY 472
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
AR +FSRM ++ +W++ + L Q+ +EA F NM +S + V++ ++ A H
Sbjct: 473 ARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYAH 528
Query: 344 AGMVEDGYRYFHEM--EHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIV 401
A + F M EH P+ + L + ++ +T + + IV
Sbjct: 529 AEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIV 588
Query: 402 LRALLSASSIHDAKYQDGVGNEVRRRLLEL-EPRGSQNLVIVANKYAEVGMWEKVSNVRR 460
AL+S ++ G + RR+ +L E R + YA+ G+ + + +
Sbjct: 589 ANALIS------MYFKCGCADS--RRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQ 640
Query: 461 FMKNVGL 467
M++ G+
Sbjct: 641 HMESAGV 647
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 20/210 (9%)
Query: 171 VRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDE 230
+R G R +A +VFD M R +++WN +I+ N A + D +
Sbjct: 41 IRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLY----DAISGGNM 96
Query: 231 TTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSR 290
T ++LS LG + + V ++ER TV A+I Y + G + AR LF
Sbjct: 97 RTGAILLSGYGRLGRVLEARRVFDGMLERNTV----AWNAMISCYVQNGDITMARRLFDA 152
Query: 291 MEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG------------VL 338
M +V +W++M+ G +A LF M ++ V G +
Sbjct: 153 MPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIF 212
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRI 368
C + G++ D + + V G+ + +
Sbjct: 213 CKMHREGLLPDQSNFASALSAVKGLGNLDV 242
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 167/504 (33%), Positives = 252/504 (50%), Gaps = 34/504 (6%)
Query: 29 RQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
+ C S LC K QIH Q V G +D + L+ S L AR +
Sbjct: 94 KSCSSLYDLCAGK----QIHQQAFVFGYGSDIFVASALIDM--YSKCGYLNDARKLF--- 144
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFT------------- 131
D +P + W ++I GY ++R REAV++F + + T++
Sbjct: 145 --DEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLL--VDETDYDEIVGVGVGVDSVL 200
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
V+ ACA + + V K G + + N L+ Y C + KVFD M
Sbjct: 201 LGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGME 260
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG-FEPDETTMLVVLSACTELGNLSLGK 250
E V SWN +I V +N EA F M G + T+ VL AC G L +GK
Sbjct: 261 ETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGK 320
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
+H Q+++ N +GT+++DMY KCG V AR F R++ NV +W+ M+ G HG
Sbjct: 321 CIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHG 380
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
+ +EA+++F M I PNY+TF+ VL AC+HAG++++G+ +F++M+ ++P HY
Sbjct: 381 HGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHY 440
Query: 371 HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLE 430
M D+L RAG+LKEAY I M +P+ IV +LL A IH +G R+L +
Sbjct: 441 SCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHK---NVELGEISARKLFK 497
Query: 431 LEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYD 490
L+P V+++N YA+ G W+ V +R MKN GL K G S VE G +H F G
Sbjct: 498 LDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDK 557
Query: 491 SQVELAGIYQILETLNLHMKVLNF 514
+ IY+ L+ LN+ ++ + +
Sbjct: 558 EHPQHEKIYEYLDELNVKLQEVGY 581
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 148/281 (52%), Gaps = 12/281 (4%)
Query: 82 RSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAE 141
RS+ YV+ + WN++I +A S +A++ F M++ + P T+P +K+C+
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98
Query: 142 ISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVI 201
+ L G Q+ G SD++ + L+ Y C DA K+FD++ ER+VVSW +
Sbjct: 99 LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158
Query: 202 ITVCVENLWLGEAV---GYFVKMKDLGFEP--------DETTMLVVLSACTELGNLSLGK 250
I+ V+N EAV F+ + + ++ D + V+SAC + S+ +
Sbjct: 159 ISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTE 218
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
VH +++G +G L+D YAKCG + +R +F MEE +V +W+++I AQ+G
Sbjct: 219 CVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNG 278
Query: 311 YAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGMVEDG 350
+ EA LFS+M K + N VT VL AC H+G ++ G
Sbjct: 279 LSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIG 319
>gi|125564656|gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
Length = 644
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 163/487 (33%), Positives = 250/487 (51%), Gaps = 41/487 (8%)
Query: 32 LSFLKLCCSK----KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
L FL C++ +H+ H + G + L+ + +S+ +L +R
Sbjct: 113 LPFLLKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLH--SYASAGSLGDSRRFFDE 170
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
V+ +V + WN++I GYA + REA +F M+R+G+ EFT +L AC+ L
Sbjct: 171 MVDRNV-VSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEF 229
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSC------------------------------ 177
G V +++ G D+ N LV YG C
Sbjct: 230 GKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAK 289
Query: 178 RRKRDACKV-FDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVV 236
R DA + F+ + E+S++SWN +I+ V+ EA+ + +MK LG PDE T+ V
Sbjct: 290 RASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAV 349
Query: 237 LSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINV 296
LSAC +LG+L+ GK +H + + L +L+DMYA+CG V A LFS M NV
Sbjct: 350 LSACGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNV 409
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
+W+A+I LA HG A++AL F +M + + P+ +TF+ +L ACNH G++E G YF
Sbjct: 410 ISWNAIIGALAMHGRAQDALMFFRSMVSDAFPPDEITFVALLSACNHGGLLEAGQYYFQA 469
Query: 357 MEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKY 416
M HV+ +KP HY M D+L R G L +A I +MP +P+ +V ALL A IH
Sbjct: 470 MRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHG--- 526
Query: 417 QDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWV 476
+G +V ++LLELE V+++N E WE + +R+ M+ G+KK G+S +
Sbjct: 527 HIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQWEDMKRLRKLMREWGMKKNMGVSSI 586
Query: 477 ELGGSIH 483
E +IH
Sbjct: 587 ETNSNIH 593
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 138/431 (32%), Positives = 206/431 (47%), Gaps = 47/431 (10%)
Query: 26 SKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQN-DAQILKELVRFCTLSSSKNLTYARSI 84
S AR L+ C S L Q+HA + V G+ + +QIL +C L + + YAR +
Sbjct: 10 SSARHVRELLRRCGSVHRLNQLHAHLVVHGVDDVTSQILAS---YCALPAGGGVWYARQL 66
Query: 85 LCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACA 140
D +P P +N+LIR Y S P+EA+ + M RRGI P EFT PF+LKACA
Sbjct: 67 F-----DRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACA 121
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
+ M V K G V+ N L+ Y S D+ + FD+M +R+VVSWN
Sbjct: 122 RVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNS 181
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
+I + EA F M+ G DE T++ +L AC+ GNL GK VH L+ RG
Sbjct: 182 MINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRG 241
Query: 261 TVLNCQLGTALIDMYAKCG-------------------------------AVGCARLLFS 289
++ L AL+DMY KCG ++ AR F
Sbjct: 242 CRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFE 301
Query: 290 RMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVED 349
++ E ++ +W+AMI Q G EAL+L++ MK ++P+ T VL AC G +
Sbjct: 302 QIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLAS 361
Query: 350 GYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSAS 409
G + H+ + P ++++ D+ AR G + A + MP + N I A++ A
Sbjct: 362 G-KMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSK-NVISWNAIIGAL 419
Query: 410 SIHDAKYQDGV 420
++H + QD +
Sbjct: 420 AMH-GRAQDAL 429
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 218/420 (51%), Gaps = 3/420 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN L+ G+ S +F M G KP FT+ VL++C+ + G QV A+
Sbjct: 219 VSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAH 278
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ K+ D D + LV Y R DA FD + R + SW VII+ + +A
Sbjct: 279 IIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKA 338
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
V YF +M+ G +P+E T+ LS C+ + L G+ +H ++ G + +G+AL+D+
Sbjct: 339 VKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDL 398
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y KCG + A +F + ++ +W+ +I G +QHG E+ALE F M + I P+ TF
Sbjct: 399 YGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATF 458
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+GVL AC+ G+VE+G + F M ++GI P HY M DIL RAG E FI M
Sbjct: 459 IGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMN 518
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
P ++ +L A +H G + ++L E+EP + ++++N +A G W+
Sbjct: 519 LTPYSLIWETVLGACKLHG---NVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDD 575
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
V N+R M + G+KK G SWVE+ G +H F S S ++ IY L+ L + + +
Sbjct: 576 VRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGY 635
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 133/261 (50%), Gaps = 1/261 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W+ +I G +EA +F M+R+G +P +FT ++ + L G +
Sbjct: 118 VAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGC 177
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ K G +SD +N L+ Y R D KVF+ M +VSWN +++ ++ G
Sbjct: 178 ICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRG 237
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
F +M GF+P+ T + VL +C+ L + GK VH +I+ + + +GTAL+DM
Sbjct: 238 PRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDM 297
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAK + A + F R+ ++++W+ +I G AQ AE+A++ F M+ I PN T
Sbjct: 298 YAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTL 357
Query: 335 LGVLCACNHAGMVEDGYRYFH 355
L C+H +E+G R H
Sbjct: 358 ASCLSGCSHMATLENG-RQLH 377
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 115/248 (46%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN L+ GYA ++ + +F MK K ++FT VLK CA L EG + A
Sbjct: 17 VSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGSLREGKVLHAL 76
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+SG + D + +LV Y C DA KVF + VV+W+ +IT + EA
Sbjct: 77 ALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEA 136
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
F M+ G P++ T+ ++S T +G+L G+ +H + + G + + LI M
Sbjct: 137 AELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMM 196
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y K V +F M ++ +W+A++ G +F M PN TF
Sbjct: 197 YMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTF 256
Query: 335 LGVLCACN 342
+ VL +C+
Sbjct: 257 ISVLRSCS 264
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 88/168 (52%)
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
A ++F M E++ VSWN ++ + + + F KMK+ + + T+ VL C
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
G+L GK +H + G ++ LG +L+DMY+KCG V A +F+++ +V WSAM
Sbjct: 64 TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
I GL Q G+ +EA ELF M+ PN T ++ + G + G
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYG 171
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A LF M E N +W+A++ G AQ G ++ L+LF MK + T VL C +
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA---YTFIMNMPFQPNPI 400
G + +G + H + G + ++ D+ ++ G + +A +T I N P+ +
Sbjct: 64 TGSLREG-KVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRN----PDVV 118
Query: 401 VLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
A+++ Q G G E + +G++
Sbjct: 119 AWSAMITGLD------QQGHGQEAAELFHLMRRKGAR 149
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/415 (34%), Positives = 219/415 (52%), Gaps = 3/415 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I W +I G + EA+ +F DM++ G+ ++T+ VL AC + L EG ++
Sbjct: 236 ISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTL 295
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ +SG + +V+ + LV Y CR R A VF M ++VVSW ++ +N + EA
Sbjct: 296 IIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEA 355
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
V F M+ G EPD+ T+ V+S+C L +L G H Q + G + + ALI +
Sbjct: 356 VRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITL 415
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y KCG++ + LF M + +W+A++ G AQ G A E ++LF M + P+ VTF
Sbjct: 416 YGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTF 475
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ VL AC+ AG+VE G +YF M HGI P HY M D+ RAG L+EA FI MP
Sbjct: 476 IAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMP 535
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
F P+ I LLS+ ++ + +G LLEL+P+ +++++ YA G W
Sbjct: 536 FSPDSIGWATLLSSCRLYG---NEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSN 592
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
V+ +RR M+ G +K G SW++ ++ F + S IY LE LN M
Sbjct: 593 VAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKM 647
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 162/346 (46%), Gaps = 34/346 (9%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGI-KPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ WN+LI GY EAV + M + G+ T+ +L + ++ G Q+
Sbjct: 103 VSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHG 162
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV----------------- 196
+ K G + V+ ++LV Y A +VFD++ ER+VV
Sbjct: 163 QIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKD 222
Query: 197 --------------SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
SW +IT ++N EA+ F M+ G D+ T VL+AC
Sbjct: 223 SKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGG 282
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
L L GK +H +I G N +G+AL+DMY KC +V A +F RM NV +W+AM
Sbjct: 283 LRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAM 342
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
++G Q+G++EEA+ +F +M+ + I P+ T V+ +C + +E+G + FH V G
Sbjct: 343 LVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQ-FHCQALVSG 401
Query: 363 IKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
+ + + + + G ++++ M F+ + + AL+S
Sbjct: 402 LISFITVSNALITLYGKCGSIEDSNQLFDEMSFR-DEVSWTALVSG 446
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 127/287 (44%), Gaps = 19/287 (6%)
Query: 127 PTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKV 186
P F Y ++ A +++ + V + + + ++ N ++ Y ++
Sbjct: 38 PETFLYNNLINAYSKLGNITYARHVFDKMPQP----NSFSWNTMLSAYSKSGDLSTMQEI 93
Query: 187 FDDMCERSVVSWNVIITVCVENLWLGEAV-GYFVKMKDLGFEPDETTMLVVLSACTELGN 245
F M R VSWN +I+ V + EAV Y MKD + T +L + G
Sbjct: 94 FSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGC 153
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
+ LG+ +H Q+++ G +G++L+DMYAK G V A +F ++E NV ++ MI G
Sbjct: 154 VDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITG 213
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKP 365
L + G +++ LF MK + +++ ++ G+ + F +M +
Sbjct: 214 LLRSGMVKDSKRLFHGMKER----DSISWTTMITGLIQNGLEAEAMDLFRDMRQ----EG 265
Query: 366 MRIHYHTMADILARAGHL------KEAYTFIMNMPFQPNPIVLRALL 406
M + +T +L G L KE +T I+ + N V AL+
Sbjct: 266 MAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALV 312
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 7/118 (5%)
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C E N + K +H +I+ T L LI+ Y+K G + AR +F +M + N ++W
Sbjct: 15 CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74
Query: 300 SAMILGLAQHGYAEEALELFSNMKN------SSISPNYVTFLGVLCAC-NHAGMVEDG 350
+ M+ ++ G E+FS M N +S+ YV + V+ A + M++DG
Sbjct: 75 NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDG 132
>gi|297607519|ref|NP_001060096.2| Os07g0578800 [Oryza sativa Japonica Group]
gi|255677918|dbj|BAF22010.2| Os07g0578800 [Oryza sativa Japonica Group]
Length = 967
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/411 (35%), Positives = 222/411 (54%), Gaps = 9/411 (2%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN LI G A R +EA+ + +M R G P FT VL AE + + GM V
Sbjct: 453 VSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGY 512
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K+G D+DV+ ++L+ Y +C + + KVFD + V WN ++ +N + EA
Sbjct: 513 AIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEA 572
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+G F +M G P T ++ A L L LGK +H LI N + ++LIDM
Sbjct: 573 LGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDM 632
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y KCG V AR +F+ ++ ++ +W+AMI+G A HG EA LF M+ ++ PN++TF
Sbjct: 633 YCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITF 692
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
L VL AC+HAG+V++G++YF+ M + +G P H +AD L RAG L EAY FI M
Sbjct: 693 LAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMK 752
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
+P V LL A +H + EV +++ ELEP+ + VI++N Y+ G W +
Sbjct: 753 IKPTSSVWSTLLRACRVHKNTV---LAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNE 809
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRF------YSGYDSQVELAGIY 499
+ +R+ M+ G+KK SW+E+ +H F + YD ++ +Y
Sbjct: 810 AAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVY 860
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 128/289 (44%), Gaps = 24/289 (8%)
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKP---TEFTYPFVLKACAE 141
L + P W IR A + A+ +F+ M R + P + P LK+CA
Sbjct: 320 LAAVASPHFPPSWAYQIRMAASQGQFLHAISLFLQM-RASVAPRSSVPASLPAALKSCAG 378
Query: 142 ISGLNEGMQVQANVTKSGLDSDVYTNNNLVRF----------YGSCRRKRDAC------- 184
+ + A +SG +D +T N L+ +G+ +
Sbjct: 379 LGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYE 438
Query: 185 ---KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
KVFD+M ER VSWN +I C E+ EA+ +M GF PD T+ VL
Sbjct: 439 SMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFA 498
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
E ++ G VH I+ G + +G++LIDMYA C + + +F + + W++
Sbjct: 499 ECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNS 558
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
M+ G AQ+G EEAL +F M + + P VTF ++ A + ++ G
Sbjct: 559 MLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLG 607
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 125/274 (45%), Gaps = 5/274 (1%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
L C K +H +G ND + L+ ++ + Y+ + ++ +D
Sbjct: 494 LPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDM--YANCTQMDYSMKVFDSF-SD 550
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
+ WN+++ GYA + EA+ +F M + G++P T+ ++ A +S L G Q+
Sbjct: 551 CDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQL 610
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
A + ++ + +++ +++L+ Y C A +VF+ + +VSW +I +
Sbjct: 611 HAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPT 670
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG-KWVHLQLIERGTVLNCQLGTA 270
EA F +M+ +P+ T L VL+AC+ G + G K+ + + G V + + A
Sbjct: 671 TEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAA 730
Query: 271 LIDMYAKCGAVGCARLLFSRME-EINVWTWSAMI 303
L D + G + A S M+ + WS ++
Sbjct: 731 LADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLL 764
>gi|356565103|ref|XP_003550784.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g47530-like [Glycine max]
Length = 515
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/423 (35%), Positives = 229/423 (54%), Gaps = 8/423 (1%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG--MQVQAN 154
+N +IR + SD P++ + ++ DM+RRGI + FV+K+C + GL +QV N
Sbjct: 5 YNTMIRACSMSDSPQKGLLLYRDMRRRGIAADPLSSSFVVKSCIRLXGLYLLGGVQVHCN 64
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ K G D ++ Y C+R DACKVFD+M R V+WNV+I+ C+ N +A
Sbjct: 65 IFKYGHQWDTLLLTAVMDLYSXCQRGGDACKVFDEMPPRDTVAWNVMISCCIRNNRTRDA 124
Query: 215 VGYFVKMKDLGF--EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
+ F +++ + EPD+ T L++L AC L L G+ +H ++E G L ALI
Sbjct: 125 LSLFDVLQNSSYKCEPDDVTCLLLLQACAHLYALEFGERIHGYMMEHGYGGALNLSNALI 184
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
MY++CG + A +F NV +WSAMI GLA +GY EA+E F M I P+
Sbjct: 185 SMYSRCGCLDKAXEVFKGTGNKNVVSWSAMISGLAMNGYGREAIESFEEMLRIGIRPDDQ 244
Query: 333 TFLGVLCACNHAGMVEDG-YRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
T GVL AC+++GMV++G +F M G+ P HY M D+L AG L +A IM
Sbjct: 245 TLTGVLSACSYSGMVDEGMMSFFDRMSREFGVTPNVHHYGCMVDLLGHAGLLDKAXQLIM 304
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGM 451
+M +P+ R LL A IH +G V L+EL+ + + + V++ N Y+ G
Sbjct: 305 SMVEKPDSTTWRTLLGACRIHG---HVTLGERVIGHLIELKAQEAGDHVLLLNIYSSAGH 361
Query: 452 WEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
WEKV+ VR+ MKN ++ G S +EL G +H F S IY+ L+ +N +++
Sbjct: 362 WEKVAEVRKLMKNKSIQTTPGCSTIELKGVVHEFVVDDVSHTRNHEIYETLDEINHQLRI 421
Query: 512 LNF 514
+
Sbjct: 422 AGY 424
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 92/238 (38%), Gaps = 52/238 (21%)
Query: 31 CLSFLKLCCSKKHLY------QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSI 84
CL L+ C HLY +IH + G + L+ S L A +
Sbjct: 145 CLLLLQAC---AHLYALEFGERIHGYMMEHGYGGALNLSNALISM--YSRCGCLDKAXEV 199
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
N +V + W+ +I G A + REA+ F +M R GI+P + T VL AC+
Sbjct: 200 FKGTGNKNV-VSWSAMISGLAMNGYGREAIESFEEMLRIGIRPDDQTLTGVLSACSYSGM 258
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
++EGM FD M V+ NV
Sbjct: 259 VDEGMM----------------------------------SFFDRMSREFGVTPNVHHYG 284
Query: 205 CVENLWLGEAVGYFVKMKDLGF----EPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
C+ +L LG A G K L +PD TT +L AC G+++LG+ V LIE
Sbjct: 285 CMVDL-LGHA-GLLDKAXQLIMSMVEKPDSTTWRTLLGACRIHGHVTLGERVIGHLIE 340
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/399 (35%), Positives = 219/399 (54%), Gaps = 4/399 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W LI+ + + AV F++M ++ T VL AC+ + LN G +V +
Sbjct: 178 VSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSY 237
Query: 155 VTKS-GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+ + +DV+ N L+ Y C A KVFD+M ++VV+WN +I+ E
Sbjct: 238 IRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYRE 297
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
A+ F M+D G +PDE T++ VL++C LG L +GKWVH + + + +G AL+D
Sbjct: 298 ALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLD 357
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MYAKCG++ A +F M+ +V++++AMI GLA HG A A ++FS M I PN VT
Sbjct: 358 MYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVT 417
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
FLG+L AC+H G+V +G +YF +M + ++P HY M D+L RAG +KEA I M
Sbjct: 418 FLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKM 477
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
+P+ ALL A IH +G V ++L EL+P +++ N Y+ V W+
Sbjct: 478 EIRPDVFACGALLGACRIHG---NVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWK 534
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQ 492
+R+ MKN ++K G S +E+ G +H F G S
Sbjct: 535 DALKIRKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSH 573
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 127/364 (34%), Positives = 189/364 (51%), Gaps = 6/364 (1%)
Query: 35 LKLCCSKKHLYQIHA-QIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDS- 92
L C S HL QIH I+ L I K + + SSS +L Y RSIL + +D+
Sbjct: 13 LNSCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSPDLFYIRSILLTHSHDAQ 72
Query: 93 -VPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
N +IR + + + +M G++P FT P VLKA A I G+ EG Q+
Sbjct: 73 FCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQI 132
Query: 152 QANVTKSGLDS-DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
A K+G+ +VY +N L+R Y C D KVFD+ R +VSW +I +
Sbjct: 133 HARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGL 192
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNCQLGT 269
AV F++M DL D T++VVLSAC+ LG+L+LG+ VH + + + +G
Sbjct: 193 YSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGN 252
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
AL+DMY KC + A +F M NV TW+AMI GLA G EAL+ F M++ + P
Sbjct: 253 ALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKP 312
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
+ VT +GVL +C + G++E G ++ H + I + + + D+ A+ G + EA+
Sbjct: 313 DEVTLVGVLNSCANLGVLEIG-KWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRV 371
Query: 390 IMNM 393
+M
Sbjct: 372 FESM 375
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 113/248 (45%), Gaps = 4/248 (1%)
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNCQLGTALIDMY 275
+ +M +G EPD T+ +VL A + + G+ +H + I+ G V N + L+ +Y
Sbjct: 97 FLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLY 156
Query: 276 AKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFL 335
+ CG++ + +F ++ +W+ +I + G A+E F M + + + T +
Sbjct: 157 SVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLV 216
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPF 395
VL AC++ G + G + + H +K + + D+ + L AY MP
Sbjct: 217 VVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPV 276
Query: 396 QPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKV 455
+ N + A++S + + +Y++ + + ++P LV V N A +G+ E
Sbjct: 277 K-NVVTWNAMISGLA-YQGRYREALDTFRMMQDKGVKP-DEVTLVGVLNSCANLGVLEIG 333
Query: 456 SNVRRFMK 463
V +M+
Sbjct: 334 KWVHAYMR 341
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/501 (31%), Positives = 252/501 (50%), Gaps = 41/501 (8%)
Query: 42 KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
K L QI AQ+ + + + ++ + + CT +L YA+ + N + WN +I
Sbjct: 2 KQLKQIQAQMIKTAIITEPKLATKFLTLCTSPHVGDLLYAQRVF-NGITSPNTFMWNAII 60
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
R Y+ SD P A + M + +T+PF+L+AC + + E +QV V K G
Sbjct: 61 RAYSNSDEPELAFLSYQQMLSSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKLGFG 120
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV-- 219
SDV+ N L+ Y C A ++FD++ ER VSWN++I +++ + A G F+
Sbjct: 121 SDVFALNALLHVYALCGEIHCARQLFDNIPERDAVSWNIMIDGYIKSGDVKTAYGVFLDM 180
Query: 220 -----------------------------KMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
+M++ GFE D + +L+AC LG L G+
Sbjct: 181 PLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLTACANLGALDQGR 240
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME--EINVWTWSAMILGLAQ 308
W+H ++ G ++ +G AL++MY KCG + A +F +++ + +V+ W+AMI G A
Sbjct: 241 WLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDGFAI 300
Query: 309 HGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRI 368
HG EALE F+ M+ I PN +TF VL AC++ G+VE+G F M+ + + P
Sbjct: 301 HGRGVEALEWFNRMRREGIRPNSITFTAVLRACSYGGLVEEGKELFKSMKCFYNVNPSIE 360
Query: 369 HYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRL 428
HY M D+L R+G L EA I MP +P+ ++ ALL A IH +G++V L
Sbjct: 361 HYGCMVDLLGRSGRLDEAKELIKKMPMKPSAVIWGALLKACWIHRDFL---LGSQVGAHL 417
Query: 429 LELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
+E++ S + +A A G W++ + VR MK++G+ G S V L G +H F +G
Sbjct: 418 VEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKSLGVPISPGKSSVTLNGIVHEFLAG 477
Query: 489 YDSQVELAGIY----QILETL 505
+ ++ I QI E L
Sbjct: 478 HQDHPQMEQIQLKLKQIAERL 498
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 232/450 (51%), Gaps = 44/450 (9%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN+LI Y + EA+ +F+ M + G P E T V+ ACA ++ EG QV A
Sbjct: 959 VSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHAR 1018
Query: 155 VTKSG-LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS---------------- 197
V KS D+ +N LV Y C R R A VFD M RSVVS
Sbjct: 1019 VVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVED 1078
Query: 198 ---------------WNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
WNV+I +N EA+ FV++K P T VL+AC
Sbjct: 1079 AQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGN 1138
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQ------LGTALIDMYAKCGAVGCARLLFSRMEEINV 296
+ +L LG+ H+ +++ G + +G +L+DMY K G++ +F RM +
Sbjct: 1139 VADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDN 1198
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
+W+AMI+G AQ+G A++AL LF M S SP+ VT +GVL AC H+G+VE+G RYF
Sbjct: 1199 VSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRS 1258
Query: 357 MEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKY 416
M HGI P + HY M D+L RAGHLKE I M +P+ ++ +LL + +H
Sbjct: 1259 MTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLHK--- 1315
Query: 417 QDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWV 476
+G +L EL+PR S V+++N YAE+G W V VR MK+ G+ K G SW+
Sbjct: 1316 NVEMGEWAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKHRGVSKQPGCSWI 1375
Query: 477 ELGGSIHRFYS---GYDSQVELAGIYQILE 503
E+G + F + G+ + E+ I +I++
Sbjct: 1376 EIGRKVSVFLARDNGHPCKNEIHAILRIIQ 1405
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 151/323 (46%), Gaps = 42/323 (13%)
Query: 92 SVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
++P P +N +I A R +A+ M +++ L ACA
Sbjct: 851 AIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKDSRT 910
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G+QV A V+KS DVY + L+ Y C +A +VF+ M ER++VSWN +IT +
Sbjct: 911 GVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQ 970
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQ 266
N +GEA+ FV M GF PDE T+ V+SAC L G+ VH ++++ +
Sbjct: 971 NGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMV 1030
Query: 267 LGTALIDMYAKCGAVGCAR-------------------------------LLFSRMEEIN 295
L AL+DMYAKCG AR ++FS+M E N
Sbjct: 1031 LSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVEKN 1090
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
V W+ +I AQ+G EEAL LF +K S+ P + T+ VL AC + ++ G
Sbjct: 1091 VIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLG----- 1145
Query: 356 EMEHVHGIKP-MRIHYHTMADIL 377
+ HVH +K R + +D+
Sbjct: 1146 QQAHVHVLKEGFRFDFGPESDVF 1168
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 142/306 (46%), Gaps = 4/306 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN ++ GY S A+ +F M++ + T VL AC I + +G +V A
Sbjct: 350 VSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAF 409
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKV--FDDMCERSVVSWNVIITVCVENLWLG 212
K G S N LVR Y C R A ++ F+ ER SWN +I+ E +
Sbjct: 410 AIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLIS-GYERHSMS 468
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
EA Y + P+++T L+AC + L G +H +I +G ++ L + LI
Sbjct: 469 EAALYALTKMQSEVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILRSVLI 528
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
DMY KC + +F +V W++MI G A G E L+LF M+ I + V
Sbjct: 529 DMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSV 588
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
TFLG L +C G V G YF M I P HY M ++L + G + E F+ +
Sbjct: 589 TFLGALVSCISEGHVRLGRSYFTLMMD-ESIIPRIEHYECMIELLGKHGCMVELEDFVEH 647
Query: 393 MPFQPN 398
MPF+P
Sbjct: 648 MPFEPT 653
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 166/368 (45%), Gaps = 58/368 (15%)
Query: 31 CLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILCN 87
C L LC ++ Q+H I Q++ + LV C L L AR +
Sbjct: 161 CAECLDLCGAR----QLHGHIAKRDFQSNVILGTALVDVYGNCFL-----LADARRAFDD 211
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+ + I WN ++R Y + AV +F M G++P +T + AC + + L E
Sbjct: 212 ILEPNA-ISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEE 270
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYG-------------------------------S 176
G + A V + G + V+ +++V Y S
Sbjct: 271 GRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLAS 330
Query: 177 CRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVV 236
C R DA +VF+ M ER++VSWN ++T + ++ L A+ F +M+ E D T+ V
Sbjct: 331 CGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSV 390
Query: 237 LSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR--LLFSRMEEI 294
LSACT + ++ G+ VH I+ G + L AL+ MY+KCG + A LLF E
Sbjct: 391 LSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSER 450
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN-----------H 343
+ ++W+++I G +H +E AL + M+ S ++PN TF L AC H
Sbjct: 451 DSYSWNSLISGYERHSMSEAALYALTKMQ-SEVTPNQSTFSSALAACANIFLLKQGMQIH 509
Query: 344 AGMVEDGY 351
A M+ GY
Sbjct: 510 AYMIRKGY 517
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 124/277 (44%), Gaps = 31/277 (11%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN +I + + P EA+ +F +M GI+P + T VL CAE L Q+ ++
Sbjct: 119 WNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMASVLSCCAECLDLCGARQLHGHIA 178
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
K S+V LV YG+C DA + FDD+ E + +SWNVI+ AV
Sbjct: 179 KRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVD 238
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F +M G P T+ + AC + L G+ +H ++ G + + ++++DMYA
Sbjct: 239 MFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYA 298
Query: 277 KCGAV--------------------------GCARL-----LFSRMEEINVWTWSAMILG 305
KCGA+ C R+ +F M+E N+ +W+AM+ G
Sbjct: 299 KCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTG 358
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
+ AL LF M+ + + +T VL AC
Sbjct: 359 YIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACT 395
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 116/251 (46%), Gaps = 9/251 (3%)
Query: 61 QILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDM 120
++ E + S N+ A+ + V +V I WN LI YA + EA+ +F+ +
Sbjct: 1059 SVVSETSLITGYARSANVEDAQMVFSQMVEKNV-IAWNVLIAAYAQNGEEEEALRLFVRL 1117
Query: 121 KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGL------DSDVYTNNNLVRFY 174
KR + PT +TY VL AC ++ L G Q +V K G +SDV+ N+LV Y
Sbjct: 1118 KRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMY 1177
Query: 175 GSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTML 234
D KVF+ M R VSWN +I +N +A+ F +M PD TM+
Sbjct: 1178 LKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMI 1237
Query: 235 VVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG-TALIDMYAKCGAVGCARLLFSRME- 292
VLSAC G + G+ + E ++ Q T +ID+ + G + L M
Sbjct: 1238 GVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSM 1297
Query: 293 EINVWTWSAMI 303
E + W++++
Sbjct: 1298 EPDAVLWASLL 1308
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 113/254 (44%), Gaps = 10/254 (3%)
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
N + +C DA ++FD M R SWN IIT EA+ F M LG
Sbjct: 89 NRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIR 148
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
P + TM VLS C E +L + +H + +R N LGTAL+D+Y C + AR
Sbjct: 149 PKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRA 208
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMV 347
F + E N +W+ ++ G + A+++F M ++ + P T + AC +
Sbjct: 209 FDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNAL 268
Query: 348 EDGYRYFHEMEHVHGIKPMRIHYH---TMADILARAGHLKEAYTFIMNMPFQP---NPIV 401
E+G R H HG + H H ++ D+ A+ G + A + P + + +
Sbjct: 269 EEG-RCIHAFVLRHGYEH---HVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSI 324
Query: 402 LRALLSASSIHDAK 415
+ L S I DAK
Sbjct: 325 VSGLASCGRIADAK 338
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 14/231 (6%)
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
+ ++ N L+ + R DA +F + + S+N +I ++ +A+ + M
Sbjct: 825 NTFSYNALLSAHARLGRPADARALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMH 884
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
F + + LSAC + G VH + + + +G+AL+DMYAKC
Sbjct: 885 ADDFVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPE 944
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
AR +F M E N+ +W+++I Q+G EAL LF +M + P+ VT V+ AC
Sbjct: 945 EARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSAC- 1003
Query: 343 HAGMVEDGYRYFHEMEHVHG--IKPMRIH-----YHTMADILARAGHLKEA 386
AG+ D E VH +K R + + D+ A+ G + A
Sbjct: 1004 -AGLAAD-----REGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAA 1048
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/428 (34%), Positives = 229/428 (53%), Gaps = 9/428 (2%)
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D +P + W +I GY+ EA+ +F++M G P EFT+ VL +C SG
Sbjct: 67 VLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSG 126
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
G Q+ + V K+ +S ++ ++L+ Y + +A +VFD + ER VVS II+
Sbjct: 127 FQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISG 186
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
+ EA+ F +++ G + T VL+A + L L G+ VH ++
Sbjct: 187 YAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFY 246
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
L +LIDMY+KCG++ +R +F M E V +W+AM++G ++HG EA+ELF MK
Sbjct: 247 VVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKE 306
Query: 325 SS-ISPNYVTFLGVLCACNHAGMVEDGYRYFHEM-EHVHGIKPMRIHYHTMADILARAGH 382
+ + P+ VTFL VL C+H GM + G F+EM G +P HY + D+ RAG
Sbjct: 307 ENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGR 366
Query: 383 LKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIV 442
++EA+ FI MPF+P + +LL A +H + +G V RRLLE+E + N VI+
Sbjct: 367 VEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVH---IGEFVARRLLEIESENAGNYVIL 423
Query: 443 ANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQIL 502
+N YA G W+ V VR MK + K G SW+EL ++H F++ S ++ +
Sbjct: 424 SNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKV 483
Query: 503 ETLNLHMK 510
L++ +K
Sbjct: 484 RELSIKIK 491
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 151/297 (50%), Gaps = 16/297 (5%)
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
Y VL C + + EG +V A++ K+ + VY L+ Y CR DA +V D+M
Sbjct: 13 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 72
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
ER+VVSW +I+ + + EA+ FV+M G P+E T VL++CT LG+
Sbjct: 73 ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 132
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+H +I+ + +G++L+DMYAK G + AR +F + E +V + +A+I G AQ G
Sbjct: 133 IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGL 192
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY- 370
EEAL+LF ++ + NYVT+ VL A + ++ G + H H ++ Y
Sbjct: 193 DEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQV-----HSHVLRAKLPFYV 247
Query: 371 ---HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEV 424
+++ D+ ++ G L + +MP + I A+L S H G+G E
Sbjct: 248 VLQNSLIDMYSKCGSLTYSRRIFDSMP-ERTVISWNAMLVGYSKH------GLGREA 297
>gi|357439099|ref|XP_003589826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478874|gb|AES60077.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 526
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 175/511 (34%), Positives = 265/511 (51%), Gaps = 47/511 (9%)
Query: 38 CCSKKHLYQIHAQIQVSGL-QNDAQILKELVRFCTLSSSKNL-TYARSILCNYVNDSVPI 95
C + HL Q H I L QND L RF ++S N +Y+ SI N PI
Sbjct: 23 CTTLTHLQQTHTFILKHALFQNDIN----LSRFIHKTASLNYPSYSYSIFTFNHNRPFPI 78
Query: 96 -PWNNLIRGYA-WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+NN+I YA +S + AV +F ++R G+ ++ P+VLK+ ++ G Q+
Sbjct: 79 FVYNNII--YALYSSNAKLAVSIFRSVRRLGLSFDSYSLPYVLKSVVCLNDFGLGKQIHC 136
Query: 154 NVTKSGLDSDVYTNNNLVRFYG-----SCRRKRD------------------------AC 184
+GLD +V ++L++ Y S R+ D A
Sbjct: 137 VGVVTGLDKNVSVCSSLIQMYSCYDVCSARKLFDEFGGNGCVLNAMIVAYVKVGDVSNAR 196
Query: 185 KVFDDMCERS--VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
K+FD M ER V SW +I+ + EA+ F +M+ +PDE +L VLSAC +
Sbjct: 197 KLFDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLENVKPDEIAILAVLSACAD 256
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
LG L LG+W+H + + L +LIDMYAK G + A LF M+ + TW+ M
Sbjct: 257 LGALHLGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALELFENMKHKTIITWTTM 316
Query: 303 ILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
I GLA HG +EAL +FS M K + PN VTF+ +L AC+H G+VE G YF M +
Sbjct: 317 IAGLALHGLGKEALRVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRSRY 376
Query: 362 GIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASS-IHDAKYQDGV 420
GI+P HY M D+L RAGHL+EA ++ MPF+ N + +LL+AS+ DA+ +
Sbjct: 377 GIEPKIEHYGCMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTRCGDAE----L 432
Query: 421 GNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGG 480
E R L LEP N +++N YA +G W + VR+ M++ G++K+ G+S++E+
Sbjct: 433 AEEALRHLTVLEPGHCGNYSLLSNTYASLGRWNESRMVRKVMQDAGVEKVPGVSFIEVNN 492
Query: 481 SIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
++ F +G + IY +L +L+ +K+
Sbjct: 493 IVYEFIAGDKLSIYFVDIYDVLHSLDGQIKI 523
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/396 (34%), Positives = 217/396 (54%), Gaps = 5/396 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I GY + +EA+ ++ DM + +KP E T V+ ACA+ + G Q+ +
Sbjct: 163 VSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSW 222
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ G S++ N L+ Y C AC +F + ++ V+SWN +I EA
Sbjct: 223 IEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEA 282
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER--GTVLNCQLGTALI 272
+ F +M G P++ TML VL AC LG + +G+W+H+ + +R G L T+LI
Sbjct: 283 LLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLI 342
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
DMYAKCG + A+ +F M ++ +W+AMI G A HG A A +LFS M+ + I P+ +
Sbjct: 343 DMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDI 402
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
TF+G+L AC+H+GM++ G F M + I P HY M D+L G KEA I
Sbjct: 403 TFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRT 462
Query: 393 MPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMW 452
MP +P+ ++ +LL A +H+ +G + L+++EP + V+++N YA G W
Sbjct: 463 MPMEPDGVIWCSLLKACKMHN---NVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRW 519
Query: 453 EKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
++V+ +R + + G+KK G S +E+ +H F G
Sbjct: 520 DQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIG 555
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 153/415 (36%), Positives = 215/415 (51%), Gaps = 34/415 (8%)
Query: 125 IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDAC 184
I P EFT+PFV+KACA + N G QV A K G S + T N L+ Y C DA
Sbjct: 91 ILPDEFTFPFVVKACARLGLHNLGKQVHAQFFKFGKKSHLITENALIDMYTKCDNLLDAH 150
Query: 185 KVFDDMCERSVVSWNVIITVCVE-------------------NLWLGEAVGY-------- 217
+FD+M ER +SWN II+ V W GY
Sbjct: 151 NLFDEMHERGAISWNGIISGHVRLGQMRRARALFDEMPNRTIVSWTAIISGYTRIGSYID 210
Query: 218 ----FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
F +M+ G EPDE +++ VL AC +LG L GKW+H+ G + + ALI+
Sbjct: 211 ALDVFREMQIAGIEPDEASIISVLPACAKLGALETGKWIHMFCARNGLLRRTCICNALIE 270
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MY KCG + A LF +M +V +WS MI GLA HG EA+ +F MK ++I PN +T
Sbjct: 271 MYTKCGCIDQACQLFDQMRGRDVISWSTMIGGLANHGKVREAIAIFERMKQTNIKPNGIT 330
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
F+G+L AC HAG E+G YF M+ I+P HY ++ D+L RAG L +A + M
Sbjct: 331 FVGLLSACAHAGFWEEGLMYFDTMKKDFHIEPEIEHYGSLVDLLGRAGRLSQALDIVEKM 390
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
P +P+ + +LLS+ H V L ELEP + N V+++N YA++G W+
Sbjct: 391 PMKPDSKIWGSLLSSCRTH---CNIEVAVIAMEHLEELEPDDTGNYVLLSNIYADLGKWD 447
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLH 508
VS +R+ +++ +KK G S +E+ F SG DS+ I+ +LE L H
Sbjct: 448 DVSRMRKLVRSKRMKKTPGCSLIEVNNVAQEFVSGDDSKPYSKEIFWLLELLAFH 502
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 1/164 (0%)
Query: 81 ARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACA 140
AR++ N ++ + W +I GY +A+ VF +M+ GI+P E + VL ACA
Sbjct: 180 ARALFDEMPNRTI-VSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASIISVLPACA 238
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
++ L G + ++GL N L+ Y C AC++FD M R V+SW+
Sbjct: 239 KLGALETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQACQLFDQMRGRDVISWST 298
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELG 244
+I + + EA+ F +MK +P+ T + +LSAC G
Sbjct: 299 MIGGLANHGKVREAIAIFERMKQTNIKPNGITFVGLLSACAHAG 342
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I W+ +I G A + REA+ +F MK+ IKP T+ +L ACA EG+
Sbjct: 294 ISWSTMIGGLANHGKVREAIAIFERMKQTNIKPNGITFVGLLSACAHAGFWEEGLMYFDT 353
Query: 155 VTKS-GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS-WNVIITVCVENLWLG 212
+ K ++ ++ +LV G R A + + M + W +++ C + +
Sbjct: 354 MKKDFHIEPEIEHYGSLVDLLGRAGRLSQALDIVEKMPMKPDSKIWGSLLSSCRTHCNIE 413
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
AV +++L EPD+T V+LS LGKW
Sbjct: 414 VAVIAMEHLEEL--EPDDTGNYVLLSNIYA----DLGKW 446
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/410 (35%), Positives = 226/410 (55%), Gaps = 7/410 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +I GY + P +AV + M+ G+ P E T VL ACA + L++G+ +
Sbjct: 363 VSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEF 422
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
++GL S V N+L+ Y CR A +VF + ++V+SW II N EA
Sbjct: 423 ADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEA 482
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ +F +M L +P+ T++ VLSAC +G LS GK +H + G + L AL+DM
Sbjct: 483 LFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDM 541
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y +CG + A F+ E+ +V +W+ ++ G AQ G A+ELF M S ++P+ +TF
Sbjct: 542 YVRCGRMEPAWNQFNSCEK-DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITF 600
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+LCAC+ +GMV DG YF MEH I P HY ++ D+L RAG L++AY FI MP
Sbjct: 601 TSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMP 660
Query: 395 FQPNPIVLRALLSASSIHDAKYQD-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
P+P + ALL+A I YQ+ +G + + E++ + +++ N YA+ G W+
Sbjct: 661 IDPDPAIWGALLNACRI----YQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWD 716
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
+V+ VR+ M+ L G SWVE+ G +H F +G D ++ I +LE
Sbjct: 717 EVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLE 766
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 157/298 (52%), Gaps = 1/298 (0%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN L+ GYA + EA+ ++ M GI+P +T+P VL+ C + L G +V +V
Sbjct: 163 WNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVI 222
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
+ G +SDV N L+ Y C A VFD M R +SWN +I+ EN E +
Sbjct: 223 RYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLR 282
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F M++ +PD TM V+SAC LG+ LG+ VH +I+ G V + +LI M++
Sbjct: 283 LFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHS 342
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
G A ++FS+ME ++ +W+AMI G ++G E+A+E ++ M++ + P+ +T
Sbjct: 343 SVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIAS 402
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
VL AC G+++ G HE G+ I +++ D+ ++ + +A +P
Sbjct: 403 VLSACAGLGLLDKGI-MLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP 459
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 162/342 (47%), Gaps = 5/342 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
++H + G ++D ++ L+ T+ ++ ++ + + I WN +I GY
Sbjct: 216 EVHLHVIRYGFESDVDVVNALI---TMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYF 272
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+D E + +F M+ + P T V+ AC + G +V V K+G ++V
Sbjct: 273 ENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVS 332
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
NN+L++ + S +A VF M + +VSW +I+ +N +AV + M+ G
Sbjct: 333 VNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEG 392
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
PDE T+ VLSAC LG L G +H G + +LIDMY+KC + A
Sbjct: 393 VVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKAL 452
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F R+ NV +W+++ILGL + + EAL F M S+ PN VT + VL AC G
Sbjct: 453 EVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIG 511
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
+ G + H G+ + + D+ R G ++ A+
Sbjct: 512 ALSCG-KEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAW 552
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 111/226 (49%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M+ + E TY +L+ C +EG +V + V+K+ V N L+ +
Sbjct: 85 MQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGD 144
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
+A VF M ER + SWNV++ + + EA+ + +M +G PD T VL
Sbjct: 145 LVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRT 204
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C L +L+ G+ VHL +I G + + ALI MY KCG + ARL+F RM + +W
Sbjct: 205 CGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISW 264
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+AMI G ++ E L LF M+ + P+ +T V+ AC G
Sbjct: 265 NAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALG 310
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
Query: 199 NVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
++I+ +C++ L +A+ + M++L +E T + +L C S G VH + +
Sbjct: 64 SLILELCLKGD-LEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122
Query: 259 RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALEL 318
T L +LG AL+ M+ + G + A +F +M E ++++W+ ++ G A+ GY +EAL L
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182
Query: 319 FSNMKNSSISPNYVTFLGVLCAC 341
+ M I P+ TF VL C
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTC 205
>gi|125583346|gb|EAZ24277.1| hypothetical protein OsJ_08028 [Oryza sativa Japonica Group]
Length = 613
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 152/448 (33%), Positives = 233/448 (52%), Gaps = 17/448 (3%)
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREA-----VWVFIDMKRRGIKPTEFT 131
++ YA SI ++D +N L+RGY + + +F+DM G++P +T
Sbjct: 82 SMAYAASIFAA-LDDPEAFDYNTLMRGYVAAAGGGGRDPAAALRLFVDMVDDGVEPDSYT 140
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM- 190
+PFV KACA++ L EG Q+Q ++ K G D ++ N+L+ FYG C A + F+ M
Sbjct: 141 FPFVFKACAQLGALQEGRQLQGHLVKLGFQRDEHSQNSLISFYGKCGEADLARRAFEQME 200
Query: 191 -CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
E++ SW+ ++ E V F M G+ PDE++M+ LSAC LG +G
Sbjct: 201 DDEQTTASWSALLAAYTRAGRWAECVESFGAMVRAGWRPDESSMVSALSACAHLGAHDVG 260
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
+ +H L+ LN + T+L+DMYAKCG + A +F M++ N WT+SAM+ GLA H
Sbjct: 261 RSIHCALLRNTARLNTFMSTSLVDMYAKCGCIENAAAVFDAMDDKNAWTYSAMVSGLALH 320
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIH 369
G +ALE+F M P+ ++GVL AC+ AG++E+G R F M H + P H
Sbjct: 321 GDGRKALEVFDAMVREGHRPDAAVYVGVLNACSRAGLLEEGLRCFDRMRLEHKLTPNAQH 380
Query: 370 YHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLL 429
Y M D++ARAG L +A I +MP P R+LL+A IH G R L
Sbjct: 381 YGCMVDLMARAGRLDDARALIGSMPTGPTDTAWRSLLNACRIH------GNLELAERALQ 434
Query: 430 ELEPRGSQNL---VIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFY 486
ELE G+ N +I+++ +A + + R + GL + G S VE+ G+ HRF
Sbjct: 435 ELERLGATNAGDYIILSDMHARAHNRDAAAARRTEAVDRGLAQAPGYSAVEVHGATHRFV 494
Query: 487 SGYDSQVELAGIYQILETLNLHMKVLNF 514
S S IY++L + ++ +
Sbjct: 495 SQDRSHPRADDIYEMLHQMEWQLRFEGY 522
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 228/421 (54%), Gaps = 5/421 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I ++ + + +M R G++P +FTY VLKACA + L G+ V
Sbjct: 420 VSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGK 479
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
KSGL D + ++ +V Y C +A K+ D + + +VSWN II+ EA
Sbjct: 480 AIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEA 539
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+F +M D+G +PD T VL C L + LGK +H Q+I++ + + + + L+DM
Sbjct: 540 QRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDM 599
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG + + L+F + +++ +W+AMI G A HG EALE+F M+ +++ PN+ TF
Sbjct: 600 YAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATF 659
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ VL AC+H G+++DG +YFH M + + P H+ M DIL R+ +EA FI +MP
Sbjct: 660 VAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMP 719
Query: 395 FQPNPIVLRALLSASSIHDAKYQD-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
+ + +V + LLS I QD V +L L+P + ++++N YA G W
Sbjct: 720 IEADAVVWKTLLSICKIR----QDVEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWV 775
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLN 513
VS RR M+ L+K G SW+E+ +H F G +Y++L +L MK+
Sbjct: 776 DVSRTRRLMRQGRLRKEPGCSWIEVQSEMHGFLVGDKVHPRSKEVYEMLNSLIGEMKLSG 835
Query: 514 F 514
+
Sbjct: 836 Y 836
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 163/342 (47%), Gaps = 5/342 (1%)
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
D + WN LI GY R +V + ++M RRG+ T +LK+C + L G+Q
Sbjct: 113 DPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQ 172
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+ A K+GL++DV + LV YG CR DA + F M ER+ VSW I CV+N
Sbjct: 173 IHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQ 232
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
+ FV+M+ LG + +C + LS + +H I+ + +GTA
Sbjct: 233 YTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTA 292
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
++D+YAK G + AR F + NV T +AM++GL + G EA++LF M S + +
Sbjct: 293 IVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFD 352
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
++ GV AC G + H + G + + D+ + L EAY
Sbjct: 353 VISLSGVFSACAEVKGYFQGLQ-VHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVF 411
Query: 391 MNMPFQPNPIVLRALLSASSIHDAKYQDGVG--NEVRRRLLE 430
M Q + + A+++A ++ Y+D + NE+ R +E
Sbjct: 412 QEME-QRDSVSWNAIIAALEQNEC-YEDTIAHLNEMLRSGME 451
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 165/341 (48%), Gaps = 4/341 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HA + +D + +V + + NL AR + +V N ++ G
Sbjct: 273 QLHAHAIKNVFSSDRVVGTAIVD--VYAKAGNLVDARRAFIGLPHHNVET-CNAMMVGLV 329
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ EA+ +F M R G+ + V ACAE+ G +G+QV KSG D DV
Sbjct: 330 RTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVC 389
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N ++ YG C+ +A VF +M +R VSWN II +N + + + +M G
Sbjct: 390 VRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSG 449
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
EPD+ T VL AC L +L G VH + I+ G L+ + + ++DMY KCGA+ A+
Sbjct: 450 MEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQ 509
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
L R+ + +W+++I G + +EEA FS M + + P++ T+ VL C +
Sbjct: 510 KLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLA 569
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+E G + ++ + I T+ D+ A+ G++ ++
Sbjct: 570 TIELGKQIHGQIIKQEMLGDEYIS-STLVDMYAKCGNMPDS 609
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 126/305 (41%), Gaps = 40/305 (13%)
Query: 125 IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDAC 184
+ F++ + L A A S L G A + SG + +N L++ Y C A
Sbjct: 15 VATATFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAH 74
Query: 185 KVFDDMCERSVVSWNVIITVCV-------------------------------ENLWLGE 213
VFD M R VSWN ++T V ++
Sbjct: 75 GVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRN 134
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
+VG ++M G D TT+ V+L +C L +L+LG +H ++ G + + G+AL+D
Sbjct: 135 SVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVD 194
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MY KC ++ A F M E N +W A I G Q+ +ELF M+ + +
Sbjct: 195 MYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPA 254
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPM----RIHYHTMADILARAGHLKEAYTF 389
+ +C + + H H IK + R+ + D+ A+AG+L +A
Sbjct: 255 YASAFRSCAAMPCLSTARQL-----HAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRA 309
Query: 390 IMNMP 394
+ +P
Sbjct: 310 FIGLP 314
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 149/341 (43%), Gaps = 4/341 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIHA +GL+ D + LV ++L A + + + + W I G
Sbjct: 172 QIHALAVKTGLETDVRAGSALVDM--YGKCRSLDDALRFF-HGMGERNSVSWGAAIAGCV 228
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+++ + +F+ M+R G+ ++ Y ++CA + L+ Q+ A+ K+ SD
Sbjct: 229 QNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRV 288
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
+V Y DA + F + +V + N ++ V EA+ F M G
Sbjct: 289 VGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSG 348
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
D ++ V SAC E+ G VH ++ G ++ + A++D+Y KC A+ A
Sbjct: 349 VGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAY 408
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
L+F ME+ + +W+A+I L Q+ E+ + + M S + P+ T+ VL AC
Sbjct: 409 LVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQ 468
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+E G H G+ T+ D+ + G + EA
Sbjct: 469 SLEYGL-VVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEA 508
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 164/473 (34%), Positives = 242/473 (51%), Gaps = 19/473 (4%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP--- 94
C S + +IHA++ S L D I +LV + L YA L + D +P
Sbjct: 52 CPSISNCREIHARVFKSLLYRDGFIGDQLV-----TCYNKLGYAEDALKLF--DDMPHKD 104
Query: 95 -IPWNNLIRGYAWSDRPREAVWVFIDMK-RRGIKPTEFTYPFVLKACAEISGLNEGMQVQ 152
+ WN+LI G+ S ++ F MK +KP E T ++ AC+ L+ G +
Sbjct: 105 LVSWNSLISGF--SRCLHMSLTAFYTMKFEMSVKPNEVTILSMISACS--GALDAGKYIH 160
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
K G +V N+L+ YG AC++F+ + + + VSWN II V N
Sbjct: 161 GFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAR 220
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
E + YF KM+ LG E DE T+L +L AC LG L + +H + G + TAL+
Sbjct: 221 EGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALL 280
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
D YAK G + + +F+ + + W+AM+ G A HG EA++LF +M N + P++V
Sbjct: 281 DTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHV 340
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
TF +L AC+H+G+V +G YF+ M V+GI+P HY M D+L R G L +AY I N
Sbjct: 341 TFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQN 400
Query: 393 MPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMW 452
MP +PN V ALL A +H +G EV L+ +EP +N ++++N Y+ W
Sbjct: 401 MPMEPNAGVWGALLGACRVHG---NIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSW 457
Query: 453 EKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+ + VR +K GLK+ G S +E G H F+ G S E IY LE L
Sbjct: 458 KDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEEL 510
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/410 (35%), Positives = 226/410 (55%), Gaps = 7/410 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +I GY + P +AV + M+ G+ P E T VL ACA + L++G+ +
Sbjct: 363 VSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEF 422
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
++GL S V N+L+ Y CR A +VF + ++V+SW II N EA
Sbjct: 423 ADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEA 482
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ +F +M L +P+ T++ VLSAC +G LS GK +H + G + L AL+DM
Sbjct: 483 LFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDM 541
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y +CG + A F+ E+ +V +W+ ++ G AQ G A+ELF M S ++P+ +TF
Sbjct: 542 YVRCGRMEPAWNQFNSCEK-DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITF 600
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+LCAC+ +GMV DG YF MEH I P HY ++ D+L RAG L++AY FI MP
Sbjct: 601 TSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMP 660
Query: 395 FQPNPIVLRALLSASSIHDAKYQD-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
P+P + ALL+A I YQ+ +G + + E++ + +++ N YA+ G W+
Sbjct: 661 IDPDPAIWGALLNACRI----YQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWD 716
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
+V+ VR+ M+ L G SWVE+ G +H F +G D ++ I +LE
Sbjct: 717 EVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLE 766
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 157/298 (52%), Gaps = 1/298 (0%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN L+ GYA + EA+ ++ M GI+P +T+P VL+ C + L G +V +V
Sbjct: 163 WNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVI 222
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
+ G +SDV N L+ Y C A VFD M R +SWN +I+ EN E +
Sbjct: 223 RYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLR 282
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F M++ +PD TM V+SAC LG+ LG+ VH +I+ G V + +LI M++
Sbjct: 283 LFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHS 342
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
G A ++FS+ME ++ +W+AMI G ++G E+A+E ++ M++ + P+ +T
Sbjct: 343 SVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIAS 402
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
VL AC G+++ G HE G+ I +++ D+ ++ + +A +P
Sbjct: 403 VLSACAGLGLLDKGI-MLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP 459
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 162/342 (47%), Gaps = 5/342 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
++H + G ++D ++ L+ T+ ++ ++ + + I WN +I GY
Sbjct: 216 EVHLHVIRYGFESDVDVVNALI---TMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYF 272
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+D E + +F M+ + P T V+ AC + G +V V K+G ++V
Sbjct: 273 ENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVS 332
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
NN+L++ + S +A VF M + +VSW +I+ +N +AV + M+ G
Sbjct: 333 VNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEG 392
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
PDE T+ VLSAC LG L G +H G + +LIDMY+KC + A
Sbjct: 393 VVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKAL 452
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F R+ NV +W+++ILGL + + EAL F M S+ PN VT + VL AC G
Sbjct: 453 EVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIG 511
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
+ G + H G+ + + D+ R G ++ A+
Sbjct: 512 ALSCG-KEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAW 552
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 111/226 (49%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M+ + E TY +L+ C +EG +V + V+K+ V N L+ +
Sbjct: 85 MQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGD 144
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
+A VF M ER + SWNV++ + + EA+ + +M +G PD T VL
Sbjct: 145 LVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRT 204
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C L +L+ G+ VHL +I G + + ALI MY KCG + ARL+F RM + +W
Sbjct: 205 CGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISW 264
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+AMI G ++ E L LF M+ + P+ +T V+ AC G
Sbjct: 265 NAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALG 310
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
Query: 199 NVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
++I+ +C++ L +A+ + M++L +E T + +L C S G VH + +
Sbjct: 64 SLILELCLKGD-LEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122
Query: 259 RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALEL 318
T L +LG AL+ M+ + G + A +F +M E ++++W+ ++ G A+ GY +EAL L
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182
Query: 319 FSNMKNSSISPNYVTFLGVLCAC 341
+ M I P+ TF VL C
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTC 205
>gi|227462996|gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 532
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 164/523 (31%), Positives = 279/523 (53%), Gaps = 39/523 (7%)
Query: 22 SDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYA 81
S + +++CLS L+ C + + Q+H+ + VS + D +++ +SS+ ++++A
Sbjct: 4 SKYVKASQRCLSLLEQCRTMSQIKQMHSHLIVSASRLDPFAAGKIISLFAVSSNADISHA 63
Query: 82 RSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAE 141
+ + + + I WN +IR + + A+ ++ +M + G P +T+ FVL+AC +
Sbjct: 64 YKLFLSLPHRTTFI-WNTIIRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVLRACTD 122
Query: 142 ISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGS-----CRRK-------RD------- 182
S + G+ A V K G +S + N L+ Y + RK RD
Sbjct: 123 NSPV--GLASHAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVITWTAL 180
Query: 183 ------------ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDE 230
A ++FD M ER+ VSW+ +IT V EA+ F ++ G P+
Sbjct: 181 INGYVKSGHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPNH 240
Query: 231 TTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSR 290
++ L+AC+ LG+L G+W+H + GT L+ LGTAL+DMYAKCG + A +F +
Sbjct: 241 AGIVGALTACSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFEK 300
Query: 291 MEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
M + + + ++++I GLA HG + +A++LF M++ + PN VTF+ VL AC+ G+V++G
Sbjct: 301 MPDKDAFAFTSLISGLANHGQSADAIQLFGRMQSEKVIPNEVTFICVLSACSRMGLVDEG 360
Query: 351 YRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASS 410
R F+ M V+GI+P HY M D+L RAG L+EA + MP +P+ VL ALL++
Sbjct: 361 LRIFNCMSVVYGIEPGVQHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALLNSCR 420
Query: 411 IH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKK 469
+H D + +G E L+E V+++N YA W+ V VR+ M +KK
Sbjct: 421 VHGDVE----LGKETVESLVERGLDHGGVHVLLSNMYASSNQWDWVVKVRKEMGAKKVKK 476
Query: 470 MKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVL 512
+ G S +E+ GS+ F +G S + + + +L ++ H+K L
Sbjct: 477 VPGCSSIEIDGSVSEFIAGDMSYLRVEDVMLVLLGIDNHLKFL 519
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 159/510 (31%), Positives = 255/510 (50%), Gaps = 37/510 (7%)
Query: 35 LKLCCSKKHLYQIHAQIQVSGLQNDAQ----ILKELVRFCTLSSSKNL------------ 78
LK CS + L + ++ + GL+ + Q +L E + + + +
Sbjct: 452 LKTLCSNRQLKEALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPP 511
Query: 79 TYARSILCNYVN------------DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKR 122
Y R+ L N D +P + W +I GY+ EA+ +F++M
Sbjct: 512 VYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLM 571
Query: 123 RGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRD 182
G P EFT+ VL +C SG G Q+ + V K+ +S ++ ++L+ Y + +
Sbjct: 572 SGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICE 631
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
A +VFD + ER VVS II+ + EA+ F +++ G + T VL+A +
Sbjct: 632 ARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSG 691
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
L L G+ VH ++ L +LIDMY+KCG++ +R +F M E V +W+AM
Sbjct: 692 LAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAM 751
Query: 303 ILGLAQHGYAEEALELFSNMKNSS-ISPNYVTFLGVLCACNHAGMVEDGYRYFHEM-EHV 360
++G ++HG EA+ELF MK + + P+ VTFL VL C+H GM + G F+EM
Sbjct: 752 LVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQK 811
Query: 361 HGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGV 420
G +P HY + D+ RAG ++EA+ FI MPF+P + +LL A +H + +
Sbjct: 812 DGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVH---I 868
Query: 421 GNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGG 480
G V RRLLE+E + N VI++N YA G W+ V VR MK + K G SW+EL
Sbjct: 869 GEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQ 928
Query: 481 SIHRFYSGYDSQVELAGIYQILETLNLHMK 510
++H F++ S ++ + L++ +K
Sbjct: 929 TLHTFHASDRSHPRKEEVFAKVRELSIKIK 958
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 158/495 (31%), Positives = 252/495 (50%), Gaps = 14/495 (2%)
Query: 21 NSDLLSKARQCLSFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVR-FCTLSSSK 76
+ +L R +F+ C K+L +IH + S + DA + L+ +C S
Sbjct: 44 SGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGS-- 101
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
+ A + + + + W +LI GYA +D P EA+ + M + KP FT+ +L
Sbjct: 102 -VVEAHKVF-DKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLL 159
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
KA + G Q+ A K DVY + L+ Y C + A VFD + ++ V
Sbjct: 160 KAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGV 219
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
SWN +I+ A+ F +M+ GFE T + S +G L GKWVH +
Sbjct: 220 SWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHM 279
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
++ L +G ++DMYAK G++ AR +F R+ ++ TW++M+ AQ+G +EA+
Sbjct: 280 VKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAV 339
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
F M+ S I N +TFL +L AC+H G+V++G YF +M + ++P HY T+ D+
Sbjct: 340 SHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYF-DMIKEYNLEPEIEHYVTVVDL 398
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRG 435
L RAG L A FI MP +P V ALL+A +H +AK VG + +L+P
Sbjct: 399 LGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAK----VGQFAADHVFQLDPDD 454
Query: 436 SQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVEL 495
S V++ N YA G W+ + VR+ MK G+KK SWVE+G S+H F + D+
Sbjct: 455 SGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRA 514
Query: 496 AGIYQILETLNLHMK 510
IY++ + +++ ++
Sbjct: 515 EEIYKMWDEISMKIR 529
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 152/435 (34%), Positives = 235/435 (54%), Gaps = 6/435 (1%)
Query: 81 ARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACA 140
AR I + + + I W+ +I Y + + R+A+ +F M G+ P + T +L AC+
Sbjct: 185 AREIF-DRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACS 243
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
++ L G + V K GLD D + LV YG CR DA +FD M ER +V+W V
Sbjct: 244 DLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTV 303
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
+I E E++ F KM++ G PD+ M+ V+ AC +LG + + + + +
Sbjct: 304 MIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKK 363
Query: 261 TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS 320
L+ LGTA+IDM+AKCG V AR +F RMEE NV +WSAMI HG +AL+LF
Sbjct: 364 FQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFP 423
Query: 321 NMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARA 380
M S I PN +T + +L AC+HAG+VE+G R+F M + ++ HY + D+L RA
Sbjct: 424 MMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRA 483
Query: 381 GHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGV-GNEVRRRLLELEPRGSQNL 439
G L EA I +M + + + A L A H +D V + LLEL+P+ +
Sbjct: 484 GRLDEALKLIESMTVEKDEGLWGAFLGACRTH----KDVVLAEKAATSLLELQPQNPGHY 539
Query: 440 VIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIY 499
++++N YA G WE V+ R M LKK+ G +W+E+ H+F G + IY
Sbjct: 540 ILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIY 599
Query: 500 QILETLNLHMKVLNF 514
++L++L ++++ +
Sbjct: 600 EMLKSLGNKLELVGY 614
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 147/278 (52%), Gaps = 1/278 (0%)
Query: 117 FIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGS 176
F ++ R G +P +T PFV++AC ++ L G + V K GLD D + LV Y
Sbjct: 18 FRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVK 77
Query: 177 CRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVV 236
CR DA +FD M ER +V+W V+I E E++ F KM++ G PD+ M+ V
Sbjct: 78 CREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTV 137
Query: 237 LSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINV 296
+ AC +LG + + + + + L+ LGTA+IDMYAKCG V AR +F RMEE NV
Sbjct: 138 VFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNV 197
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
+WSAMI HG +AL+LF M +S + P+ +T +L AC+ ++ G R H
Sbjct: 198 ISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMG-RLIHH 256
Query: 357 MEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ + G+ + D+ + +++A MP
Sbjct: 257 IVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMP 294
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 155/318 (48%), Gaps = 2/318 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +I GYA + E++ +F M+ G+ P + V+ ACA++ +++ +
Sbjct: 97 VTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDY 156
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ + DV ++ Y C A ++FD M E++V+SW+ +I + +A
Sbjct: 157 IQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKA 216
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F M G PD+ T+ +L AC++L NL +G+ +H + + G L+ + AL+DM
Sbjct: 217 LDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDM 276
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y KC + AR LF +M E ++ TW+ MI G A+ G A E+L LF M+ + P+ V
Sbjct: 277 YGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAM 336
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ V+ AC G + R + + I M D+ A+ G ++ A M
Sbjct: 337 VTVVFACAKLGAMHKA-RTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRME 395
Query: 395 FQPNPIVLRALLSASSIH 412
+ N I A+++A H
Sbjct: 396 -EKNVISWSAMIAAYGYH 412
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 2/197 (1%)
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY 275
G F ++ G PD T+ V+ AC +L NL +G+ +H + + G L+ + AL+DMY
Sbjct: 16 GTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMY 75
Query: 276 AKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFL 335
KC + AR LF +M+E ++ TW+ MI G A+ G A E+L LF M+ + P+ V +
Sbjct: 76 VKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMV 135
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPF 395
V+ AC G + R + + I M D+ A+ G ++ A M
Sbjct: 136 TVVFACAKLGAMHKA-RIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRME- 193
Query: 396 QPNPIVLRALLSASSIH 412
+ N I A+++A H
Sbjct: 194 EKNVISWSAMIAAYGYH 210
>gi|147818273|emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera]
Length = 499
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 163/479 (34%), Positives = 254/479 (53%), Gaps = 37/479 (7%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
++HA + SGL L++L+ T SSS +L +AR +L + V +N + R YA
Sbjct: 6 RLHAHLITSGLHQQENHLRKLITLYT-SSSSSLHHAR-LLFDAVYHPSTYLYNTMFRVYA 63
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
S P A+ + M R G P +T+PF+LKAC+ ++ L +G ++ K GL V+
Sbjct: 64 ASPTPLHALLLHRHMFRHGPPPDTYTFPFLLKACSALAHLLKGQELHCQALKFGLGGHVF 123
Query: 166 TNNNLVRFYGS------CRRKRD--------------AC-----------KVFDDMCERS 194
N+L+ YGS RR D AC KVFD+M ERS
Sbjct: 124 VENSLIHLYGSNSRMDSARRVFDGMGYRDIASWTTLLACYANSCSVEAARKVFDEMPERS 183
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHL 254
VVS++ ++ V EA+ F ++ + EP ++ ++ VL AC LG L +G+WV+
Sbjct: 184 VVSYSAMLAAYVRGNRFREALELFRELFSVKIEPSDSCVMSVLCACANLGALDVGRWVYS 243
Query: 255 QLIE-RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
+ +G ++ ++ TALIDM+ KCG++ A L+F +E +V W+AM+ GLA HG E
Sbjct: 244 FVCHSKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGLAMHGLGE 303
Query: 314 EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
+ +E F M +S I P+ VTF+ +L C+H+G+V +G YF ME G++P H+ +
Sbjct: 304 QLIEAFEKMVDSGIKPDEVTFVALLSGCSHSGLVNEGLYYFDRMESDFGVEPTVEHFGCV 363
Query: 374 ADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP 433
D+L RAG + +A I MPF+PN + ALL+A ++ VG + L++ EP
Sbjct: 364 VDLLGRAGLIDQAMQLISEMPFEPNAAIWGALLNACRVYK---NVEVGELAAQWLIKDEP 420
Query: 434 RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQ 492
+ + + Y E G W++V V+ MK VG +K G S +E+GG + F G S
Sbjct: 421 WNGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIEVGGICYEFVVGDKSH 479
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 155/420 (36%), Positives = 222/420 (52%), Gaps = 3/420 (0%)
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
D I W+ +I GYA + EA+ +F +M G KP+EFT+ V+ AC++I L EG Q
Sbjct: 277 DKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQ 336
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+ K+G + +Y LV Y C DA K FD + E +V W +I+ +N
Sbjct: 337 IHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGE 396
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
A+ + +M+ P E TM VL AC+ L L GK +H Q I+ G L +G+A
Sbjct: 397 NETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSA 456
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
L MYAKCG++ L+F RM ++ TW+AMI GL+Q+G +ALELF +++ + P+
Sbjct: 457 LSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPD 516
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
YVTF+ VL AC+H G+VE G YF M GI P HY M DIL+RAG L E FI
Sbjct: 517 YVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETKEFI 576
Query: 391 MNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVG 450
+ + R LL A + Y+ +G +L+EL + S +++++ Y +G
Sbjct: 577 ESATIDHGMCLWRILLGACRNY-RNYE--LGAYAGEKLMELGSQESSAYILLSSIYTALG 633
Query: 451 MWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+ V VRR MK G+ K G SW+EL +H F G ++ I L L HMK
Sbjct: 634 RSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVVGDQIHPQIVKICSELRRLRDHMK 693
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 167/369 (45%), Gaps = 21/369 (5%)
Query: 29 RQCLSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
R + L C +K L + IHAQ+ +G + + LV + ++ A+ +
Sbjct: 11 RSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNL--YAKCGSIVKAKLVF 68
Query: 86 CNYVNDSVPIPWNNLIRGYAWSDRPREA--VWVFIDMKRRGIKPTEFTYPFVLKACAEIS 143
+ N V + WN LI GY+ + + +F M+ P T+ V A +
Sbjct: 69 ESITNKDV-VSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSP 127
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
G+Q A K+ DV+ ++L+ Y DA KVFD + ER+ VSW II+
Sbjct: 128 ETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIIS 187
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
EA F M+ D+ VLSA T + GK +H ++ G +
Sbjct: 188 GYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLS 247
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
+G AL+ MY KCG + A F + + TWSAMI G AQ G + EAL LF NM
Sbjct: 248 IASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMH 307
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIK-----PMRIHYHT-MADIL 377
+ P+ TF+GV+ AC+ G +E+G + +HG +I++ T + D+
Sbjct: 308 LNGNKPSEFTFVGVINACSDIGALEEG-------KQIHGYSLKAGYECQIYFMTALVDMY 360
Query: 378 ARAGHLKEA 386
A+ G L +A
Sbjct: 361 AKCGSLVDA 369
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 2/228 (0%)
Query: 125 IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDAC 184
+ P ++ +L C L +G + A + ++G S VY N+LV Y C A
Sbjct: 6 LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAK 65
Query: 185 KVFDDMCERSVVSWNVIITVCVENLWLGEA--VGYFVKMKDLGFEPDETTMLVVLSACTE 242
VF+ + + VVSWN +I + +G + + F +M+ P+ T V +A +
Sbjct: 66 LVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASS 125
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
G H I+ + +G++LI+MY K G + AR +F + E N +W+ +
Sbjct: 126 SPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATI 185
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
I G A A EA ELF M+ + + + VL A +V G
Sbjct: 186 ISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYG 233
>gi|413933352|gb|AFW67903.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 158/468 (33%), Positives = 241/468 (51%), Gaps = 44/468 (9%)
Query: 77 NLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
+L AR +L D++P + W LI + EA+ ++ M G +P +
Sbjct: 328 DLDGARRVL-----DAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCF 382
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
VL ACA + L G ++ AN K G ++++ +++L+ Y C++ A +VF+ + E
Sbjct: 383 SSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPE 442
Query: 193 -------------------------------RSVVSWNVIITVCVENLWLGEAVGYFVKM 221
R+ VSWN +I+ EN G+A+ YF M
Sbjct: 443 KNTVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAM 502
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
G P E T+ VL AC L +L +G+ VH ++++ G N +GTAL DMYAK G +
Sbjct: 503 LASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALCDMYAKSGDL 562
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
+R +F +M E N TW+AM+ GLA++G+AEE++ LF +M + I+PN TFL +L AC
Sbjct: 563 DSSRRVFYQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFAC 622
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIV 401
+H G+VE YF M+ HGI P HY M D+LARAG L EA +M + + +
Sbjct: 623 SHCGLVEQAIHYFETMQ-AHGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELDTSS 681
Query: 402 LRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRF 461
+LLSA S + K +G ++L ELE + V+++N YA G W+ + R
Sbjct: 682 WSSLLSACSTYRNKE---IGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAETRIL 738
Query: 462 MKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
M+ LKK G SW++L G H F+S + IY+IL+ L L +
Sbjct: 739 MQGASLKKDAGCSWLQLRGQYHAFFSWKEKHPLSLEIYEILDLLMLEL 786
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 144/365 (39%), Gaps = 64/365 (17%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
+ +I G+ ++ ++A VF M ++P T V+KAC + M V
Sbjct: 214 FTAMISGFVRNELHKDAFTVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAV 273
Query: 157 KSGL-DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV--------- 206
K L + + +N+L+ Y A +VFDDM R VVSW ++ V
Sbjct: 274 KCNLFEKSIEVHNSLITLYLRMGDAAAARRVFDDMEVRDVVSWTALLDVYADLGDLDGAR 333
Query: 207 ----------ENLW------------LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELG 244
E W EA+ + +M G P+ + VLSAC L
Sbjct: 334 RVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSACATLQ 393
Query: 245 NLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMIL 304
+L G +H ++ G+ N + ++LIDMY KC A+ +F+ + E N W+++I
Sbjct: 394 DLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWNSLIS 453
Query: 305 GLAQHGYAEEALELFSNMK-------NSSIS------------------------PNYVT 333
G + +G EA LF+ M N+ IS P +T
Sbjct: 454 GYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGEIT 513
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
VL AC + +E G R H GI+ + D+ A++G L + M
Sbjct: 514 LSSVLLACANLCSLEMG-RMVHAEIVKLGIEDNIFMGTALCDMYAKSGDLDSSRRVFYQM 572
Query: 394 PFQPN 398
P + N
Sbjct: 573 PEKNN 577
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 82/197 (41%), Gaps = 36/197 (18%)
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
+ + A+ +SGL +D +NL+ Y + R D + F D CV
Sbjct: 100 LSLHAHALRSGLATDRSVASNLLTAYAAFARAGDRDQAFRD---------------CVA- 143
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+A F T ++S + G+++ + + + E+ V
Sbjct: 144 ---ADAASSF-------------TYDFMVSEHVKAGDIASARRLFYGMPEKSVVSY---- 183
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
T ++D K G+V A L+ R +V ++AMI G ++ ++A +F M S+
Sbjct: 184 TTMVDALMKRGSVRDAVELYERCPLHSVAFFTAMISGFVRNELHKDAFTVFRKMLTCSVR 243
Query: 329 PNYVTFLGVLCACNHAG 345
PN VT + V+ AC AG
Sbjct: 244 PNVVTLICVIKACVGAG 260
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 160/466 (34%), Positives = 250/466 (53%), Gaps = 7/466 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+IH ++ SG D+ I LV +L A I +V + WN++I GY
Sbjct: 228 EIHEELINSGFLLDSFISSALVDM--YGKCGHLEMAIEIFEQMPKKTV-VAWNSMISGYG 284
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ +F M G+KPT T ++ C+ + L EG V ++ + DV+
Sbjct: 285 LKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVF 344
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N++L+ Y C + A K+F + + VVSWNV+I+ V L EA+G F +M+
Sbjct: 345 VNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSY 404
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
E D T VL+AC++L L GK +H +IE+ N + AL+DMYAKCGAV A
Sbjct: 405 VESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAF 464
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F + + ++ +W++MI HG+A ALELF+ M S++ P+ V FL +L AC HAG
Sbjct: 465 SVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAG 524
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP-FQPNPIVLRA 404
+V++G YF++M +V+GI P HY + D+L RAG L EAY + P + + +L
Sbjct: 525 LVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLST 584
Query: 405 LLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKN 464
L SA +H +G E+ R L++ +P S ++++N YA W++V VR MK
Sbjct: 585 LFSACRLHR---NIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKE 641
Query: 465 VGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+GLKK G SW+E+ I F+ +S + L +++ L L+ HM+
Sbjct: 642 LGLKKNPGCSWIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHME 687
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 212/437 (48%), Gaps = 11/437 (2%)
Query: 28 ARQCLSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSI 84
R+ L L+ C + K L Q IH ++ GLQND + K L+ S +A+ +
Sbjct: 3 TRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLIN--QYLSCHLYDHAKCV 60
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEIS 143
N N WN L+ GY + EA+ +F + +KP +TYP V KAC +
Sbjct: 61 FDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLH 120
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
G + + K+GL D+ ++LV YG C A +F++M E+ V WN +I+
Sbjct: 121 RYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVIS 180
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
++ +A+ YF M+ GFEP+ T+ +S+C L +L+ G +H +LI G +L
Sbjct: 181 CYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLL 240
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
+ + +AL+DMY KCG + A +F +M + V W++MI G G ++LF M
Sbjct: 241 DSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMY 300
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
N + P T ++ C+ + + +G ++ H + I+P ++ D+ + G +
Sbjct: 301 NEGVKPTLTTLSSLIMVCSRSARLLEG-KFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKV 359
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVG--NEVRRRLLELEPRGSQNLVI 441
+ A +P + +V ++ + + + K + +G +E+R+ +E + +++
Sbjct: 360 ELAEKIFKLIP--KSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLT 417
Query: 442 VANKYAEVGMWEKVSNV 458
++ A + +++ N+
Sbjct: 418 ACSQLAALEKGKEIHNL 434
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 163/518 (31%), Positives = 270/518 (52%), Gaps = 41/518 (7%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+S L + K + QIHA++ V G D ++ + V+ LS L YA IL + +
Sbjct: 18 ISLLDSGTTFKEIRQIHAKLYVDGTLKDDHLVGQFVKAVALSDHTYLDYANQIL-DRSDK 76
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVF--IDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
N++IR + S P ++ + I G+KP +T F+++AC + G+
Sbjct: 77 PTLFALNSMIRAHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLVQACTGLGMRETGL 136
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYG----------------------------SCRRKR 181
QV + G D+D + L+ Y +C R
Sbjct: 137 QVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAMVTACARCG 196
Query: 182 D---ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
D A K+F+ M E+ ++WN +I+ + EA+ F M+ G + + +M+ VLS
Sbjct: 197 DVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSMISVLS 256
Query: 239 ACTELGNLSLGKWVHLQLIERGTV-LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVW 297
ACT+LG L G+W H IER + + +LGT L+D+YAKCG + A +F MEE NV+
Sbjct: 257 ACTQLGALDQGRWAH-SYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEKNVY 315
Query: 298 TWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM 357
TWS+ + GLA +G+ E+ L+LFS MK ++PN VTF+ VL C+ G V++G ++F M
Sbjct: 316 TWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQKHFDSM 375
Query: 358 EHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQ 417
+ GI+P HY + D+ ARAG L++A + I MP + + V +LL AS + Y+
Sbjct: 376 RNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLLHASRM----YK 431
Query: 418 D-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWV 476
+ +G +++LELE V+++N YA+ W+ VS+VR+ MK+ G++K G S +
Sbjct: 432 NLELGVLASKKMLELETSNHGAYVLLSNIYADSDDWDNVSHVRQSMKSKGVRKQPGCSVM 491
Query: 477 ELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
E+ G +H F+ G S + I + + ++ +++ +
Sbjct: 492 EVNGEVHEFFVGDKSHPKYNEIDAVWKDISRRLRLAGY 529
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 133/388 (34%), Positives = 217/388 (55%), Gaps = 5/388 (1%)
Query: 124 GIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDA 183
G +P E T+ ++ AC EG+ + V KSG+ +V N L+ YG +
Sbjct: 632 GFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLISS 691
Query: 184 CKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
CK+F+D+ +++VSWN +I + ++N E + YF + +G +PD+ T L VL C ++
Sbjct: 692 CKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDI 751
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
G + L + +H ++ G N + TAL+D+YAK G + + +F + + W+AM+
Sbjct: 752 GVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAML 811
Query: 304 LGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
A HGY +A++ F M + +SP++VTF +L AC+H+G+VE+G YF M + I
Sbjct: 812 AAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRI 871
Query: 364 KPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG-VGN 422
+P HY M D++ R+G L++AY I MP +P+ V ALL A + Y+D +G
Sbjct: 872 EPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRV----YKDTQLGT 927
Query: 423 EVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSI 482
+ +RL ELEPR +N ++++N Y+ G+W+ S +R MK GL + G S++E G I
Sbjct: 928 KAAKRLFELEPRDGRNYIMLSNIYSASGLWKDASRIRNLMKQKGLVRASGYSYIEHGNKI 987
Query: 483 HRFYSGYDSQVELAGIYQILETLNLHMK 510
H+F G S E I + L+ + MK
Sbjct: 988 HKFVVGDWSHPESEKIQKKLKEIRKKMK 1015
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%), Gaps = 4/205 (1%)
Query: 210 WLGEAVGYFVKM--KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
+LG+ +M ++GF P+E T L ++SAC GN G +H +++ G + ++
Sbjct: 615 YLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKV 674
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
AL+++Y K G + + LF + N+ +W+ MI+ Q+G AEE L F+ + +
Sbjct: 675 VNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGL 734
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
P+ TFL VL C G+V + H + G + D+ A+ G L+++
Sbjct: 735 KPDQATFLAVLRVCEDIGVVRLS-QGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSS 793
Query: 388 TFIMNMPFQPNPIVLRALLSASSIH 412
T + + P+ + A+L+A + H
Sbjct: 794 TVFLEIT-SPDSMAWTAMLAAYATH 817
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 93/212 (43%), Gaps = 4/212 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I + + E + F + G+KP + T+ VL+ C +I + +
Sbjct: 704 VSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGL 763
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ G +++ L+ Y R D+ VF ++ ++W ++ + + +A
Sbjct: 764 IMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDA 823
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG--TALI 272
+ +F M G PD T +L+AC+ G + G++ + + + + + +L + ++
Sbjct: 824 IKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRY-YFETMSKRYRIEPRLDHYSCMV 882
Query: 273 DMYAKCGAVGCARLLFSRME-EINVWTWSAMI 303
D+ + G + A L M E + W A++
Sbjct: 883 DLMGRSGLLQDAYGLIKEMPMEPSSGVWGALL 914
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 137/412 (33%), Positives = 228/412 (55%), Gaps = 3/412 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W LI Y AV F M++ + P ++T+ V+ +CA ++ G Q+ +
Sbjct: 292 VSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGH 351
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V + GL + + N+++ Y C + A VF + + ++SW+ II+V + + EA
Sbjct: 352 VLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEA 411
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
Y M+ G +P+E + VLS C + L GK VH L+ G + +A+I M
Sbjct: 412 FDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISM 471
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG+V A +F+ M+ ++ +W+AMI G A+HGY++EA+ LF + + + P+YV F
Sbjct: 472 YSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMF 531
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+GVL ACNHAGMV+ G+ YF M +V+ I P + HY + D+L RAG L EA I +MP
Sbjct: 532 IGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMP 591
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
F + +V LL A +H + G +LL+L+P + + +AN YA G W++
Sbjct: 592 FHTDDVVWSTLLRACRVHGDVDR---GRWTAEQLLQLDPNSAGTHITLANIYAAKGRWKE 648
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
+++R+ MK+ G+ K +G SWV + ++ F +G + + I +L+ L+
Sbjct: 649 AAHIRKLMKSKGVIKERGWSWVNVNDQLNAFVAGDQAHPQSEHITTVLKLLS 700
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 132/296 (44%), Gaps = 9/296 (3%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +I G + E + F +M R + T+ LKA A+ S L+ G +
Sbjct: 191 VSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQ 250
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K G D + N L Y C + ++F+ M VVSW +I+ V+ A
Sbjct: 251 TIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHA 310
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
V F +M+ P++ T V+S+C L G+ +H ++ G V + ++I +
Sbjct: 311 VEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITL 370
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG + A L+F + ++ +WS +I +Q GYA+EA + S M+ PN
Sbjct: 371 YSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFAL 430
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVH----GIKPMRIHYHTMADILARAGHLKEA 386
VL C ++E G + H H GI + + + + ++ G ++EA
Sbjct: 431 SSVLSVCGSMALLEQGKQV-----HAHLLCIGIDHEAMVHSAIISMYSKCGSVQEA 481
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 122/269 (45%), Gaps = 8/269 (2%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
I W LI GY + EA+ +F +M G + +F LKACA + G +
Sbjct: 89 ISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVALKACALGVNICFGELLHG 148
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
KSGL V+ ++ L+ Y + C+VF+ M R+VVSW II V + E
Sbjct: 149 FSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNME 208
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
+ YF +M D T + L A + L GK +H Q I++G + + L
Sbjct: 209 GLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLAT 268
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MY KCG LF +M +V +W+ +I Q G E A+E F M+ S +SPN T
Sbjct: 269 MYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYT 328
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
F V+ +C + + G E +HG
Sbjct: 329 FAAVISSCANLAAAKWG-------EQIHG 350
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 133/293 (45%), Gaps = 14/293 (4%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIH + GL N + ++ TL S L + S++ + + I W+ +I Y+
Sbjct: 347 QIHGHVLRLGLVNALSVANSII---TLYSKCGLLKSASLVFHGITRKDIISWSTIISVYS 403
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+EA M+R G KP EF VL C ++ L +G QV A++ G+D +
Sbjct: 404 QGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAM 463
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
++ ++ Y C ++A K+F+ M ++SW +I E+ + EA+ F K+ +G
Sbjct: 464 VHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVG 523
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQL--IERGTVLNCQLGTALIDMYAKCGAVGC 283
+PD + VL+AC G + LG + + + + R + G LID+ + G +
Sbjct: 524 LKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYG-CLIDLLCRAGRLSE 582
Query: 284 ARLLFSRME-EINVWTWSAMILGLAQHG-------YAEEALELFSNMKNSSIS 328
A + M + WS ++ HG AE+ L+L N + I+
Sbjct: 583 AEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLLQLDPNSAGTHIT 635
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 8/226 (3%)
Query: 163 DVYTNNNLVRFYGSCR---RKRDACK---VFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
+ Y+ +N++ + ++ CK +FD M R +SW +I V EA+
Sbjct: 50 NAYSVHNMLELNSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALI 109
Query: 217 YFVKM-KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY 275
F M G + D+ + V L AC N+ G+ +H ++ G + + + +ALIDMY
Sbjct: 110 LFSNMWVHPGPQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMY 169
Query: 276 AKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFL 335
K G + +F +M NV +W+A+I GL GY E L FS M S + + TF
Sbjct: 170 MKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFA 229
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAG 381
L A + ++ G + H G +T+A + + G
Sbjct: 230 IALKASADSSLLHHG-KAIHTQTIKQGFDESSFVINTLATMYNKCG 274
>gi|357441857|ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480254|gb|AES61457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 490
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 165/491 (33%), Positives = 243/491 (49%), Gaps = 41/491 (8%)
Query: 21 NSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTY 80
N L + L L ++ HL QIHA GL + QIL V CT S + Y
Sbjct: 2 NKSLQKIESKILHLLHNTKTQTHLPQIHAHFLRHGLHHSNQILSHFVSVCT--SLHQIPY 59
Query: 81 ARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKR--RGIKPTEFTYPFVLKA 138
A +I N+ + + +N++I+ ++ S P + F ++ + I P FT+P +LKA
Sbjct: 60 ATTIF-NHTHHPNILLFNSIIKAHS-SFPPFHQSFHFFNLMKMTHNILPDNFTFPPLLKA 117
Query: 139 CAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC------- 191
+ + + G + A+VT G L+ Y +C + DA KVFD+M
Sbjct: 118 TSYLRDYDLGQCLHAHVTALGFYRHSPVEIGLLEVYSNCGKMEDANKVFDEMLHREVVVW 177
Query: 192 ------------------------ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
+RSVVSWN++I+ + GEA G F +M + GFE
Sbjct: 178 NIMINGFCKMGDLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFE 237
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC-QLGTALIDMYAKCGAVGCARL 286
PD+ T++ VL C LG++ G+W+H +G + +G +L+D Y KCG + A
Sbjct: 238 PDDATLVTVLPVCARLGDVDAGEWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAWK 297
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
+F+ M + NV +W+AMI GL +G E +ELF M ++P+ TF+GVL C HAG
Sbjct: 298 VFNEMTKKNVVSWNAMISGLGLNGKGELGVELFEKMARKGVTPSDSTFVGVLACCAHAGF 357
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALL 406
V+ G F M + P HY + D+L R GH+KEAY I NMP PN + ALL
Sbjct: 358 VDKGREIFDSMTVKFKLSPKLEHYGCVVDLLGRCGHVKEAYDLIRNMPLMPNAALWGALL 417
Query: 407 SASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVG 466
SA H + V + L+ LEP S N V+++N YAE W +V VR M+ VG
Sbjct: 418 SACRTHGDRE---VAEIAAKELVRLEPGNSGNYVLLSNVYAEERKWNEVEKVRVLMQGVG 474
Query: 467 LKKMKGMSWVE 477
+KK G S ++
Sbjct: 475 IKKNPGQSALQ 485
>gi|115480595|ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|113632124|dbj|BAF25805.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|125606583|gb|EAZ45619.1| hypothetical protein OsJ_30287 [Oryza sativa Japonica Group]
Length = 644
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 163/487 (33%), Positives = 249/487 (51%), Gaps = 41/487 (8%)
Query: 32 LSFLKLCCSK----KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
L FL C++ +H+ H + G + L+ + +S+ +L +R
Sbjct: 113 LPFLLKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLH--SYASAGSLGDSRRFFDE 170
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
V+ +V + WN++I GYA + REA +F M+R+G+ EFT +L AC+ L
Sbjct: 171 MVDRNV-VSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEF 229
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSC------------------------------ 177
G V +++ G D+ N LV YG C
Sbjct: 230 GKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAK 289
Query: 178 RRKRDACKV-FDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVV 236
R DA + F+ + E+S++SWN +I+ V+ EA+ + +MK LG PDE T+ V
Sbjct: 290 RASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAV 349
Query: 237 LSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINV 296
LSAC +LG+L+ GK +H + + L +L+DMYA+CG V A LFS M NV
Sbjct: 350 LSACGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNV 409
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
+W+A+I LA HG A++AL F +M + P+ +TF+ +L ACNH G++E G YF
Sbjct: 410 ISWNAIIGALAMHGRAQDALMFFRSMVFDAFPPDEITFVALLSACNHGGLLEAGQYYFQA 469
Query: 357 MEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKY 416
M HV+ +KP HY M D+L R G L +A I +MP +P+ +V ALL A IH
Sbjct: 470 MRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHG--- 526
Query: 417 QDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWV 476
+G +V ++LLELE V+++N E WE + +R+ M+ G+KK G+S +
Sbjct: 527 HIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQWEDMKRLRKLMREWGMKKNMGVSSI 586
Query: 477 ELGGSIH 483
E +IH
Sbjct: 587 ETNSNIH 593
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 138/431 (32%), Positives = 205/431 (47%), Gaps = 47/431 (10%)
Query: 26 SKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQN-DAQILKELVRFCTLSSSKNLTYARSI 84
S AR L+ C S L Q+HA + V G+ + +QIL +C L + + YAR +
Sbjct: 10 SSARHVRELLRRCGSVHRLNQLHAHLVVHGVDDVTSQILAS---YCALPAGGGVWYARQL 66
Query: 85 LCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACA 140
D +P P +N+LIR Y S P+EA+ + M RRGI P EFT PF+LKACA
Sbjct: 67 F-----DRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACA 121
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
+ M V K G V+ N L+ Y S D+ + FD+M +R+VVSWN
Sbjct: 122 RVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNS 181
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
+I + EA F M+ G DE T++ +L AC+ GNL GK VH L+ RG
Sbjct: 182 MINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRG 241
Query: 261 TVLNCQLGTALIDMYAKCG-------------------------------AVGCARLLFS 289
++ L AL+DMY KCG ++ AR F
Sbjct: 242 CRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFE 301
Query: 290 RMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVED 349
++ E ++ +W+AMI Q G EAL+L++ MK ++P+ T VL AC G +
Sbjct: 302 QIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLAS 361
Query: 350 GYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSAS 409
G + H+ + P ++++ D+ AR G + A + MP N I A++ A
Sbjct: 362 G-KMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMP-SKNVISWNAIIGAL 419
Query: 410 SIHDAKYQDGV 420
++H + QD +
Sbjct: 420 AMH-GRAQDAL 429
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 143/395 (36%), Positives = 224/395 (56%), Gaps = 9/395 (2%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNE-GMQVQANVTKSGLDSDVYTNNNLVRFYGSCR 178
M R + P++ ++ +L++CA ISG + G + K G + D+ L+ FY
Sbjct: 21 MLRNDVLPSKTSFSLILRSCA-ISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKHG 79
Query: 179 RKRDACKVFDDMCERSV--VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVV 236
+A +FD+M ER+ V+WN +I+ V+ G A+ F +M+ +P E TM+ +
Sbjct: 80 YVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSL 139
Query: 237 LSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINV 296
LSAC LG L +G+W+H + + ++ LG ALIDMY KCGA+ A +F + N+
Sbjct: 140 LSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNI 199
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
+ W+++I+GL +G EEA+ F M+ I P+ VTF+G+L C+H+G++ G RYF E
Sbjct: 200 FCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSE 259
Query: 357 MEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH-DAK 415
M V+G++P HY M D+L RAG+LKEA I MP +PN +VL +LL A IH D K
Sbjct: 260 MLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTK 319
Query: 416 YQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSW 475
+G +V ++LLEL+P N V ++N YA + W+ V+ R+ M G+ K G S
Sbjct: 320 ----LGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSS 375
Query: 476 VELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+E+ +H F +G S + I L+ + +K
Sbjct: 376 IEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELK 410
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 120/296 (40%), Gaps = 36/296 (12%)
Query: 48 HAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN-DSVPIPWNNLIRGYAW 106
H QI G + D + L+ F + + AR++ N +S + WN +I Y
Sbjct: 53 HCQIMKMGFEYDMILQTGLLDF--YAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQ 110
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
A+ +F M+ +KPTE T +L ACA + L+ G + + L DV
Sbjct: 111 CGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVL 170
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
N L+ Y C A VF + +++ WN II N EA+ F+ M+ G
Sbjct: 171 GNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGI 230
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
+PD T + +LS C+ G LS G+ +++ G G
Sbjct: 231 KPDGVTFVGILSGCSHSGLLSAGQRYFSEML---------------------GVYGL--- 266
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
E V + M+ L + GY +EALEL M + PN + +L AC
Sbjct: 267 ------EPGVEHYGCMVDLLGRAGYLKEALELIRAM---PMKPNSMVLGSLLRACQ 313
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 3/188 (1%)
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
+I V +E+ + +G++ M P +T+ ++L +C G LG+ H Q+++ G
Sbjct: 1 MIRVSLESGVCPDFLGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMG 60
Query: 261 TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEE--INVWTWSAMILGLAQHGYAEEALEL 318
+ L T L+D YAK G V AR LF M E N TW+ MI Q G A+ +
Sbjct: 61 FEYDMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISM 120
Query: 319 FSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILA 378
F M++ ++ P VT + +L AC H G ++ G + H +K + + + D+
Sbjct: 121 FQQMQSENVKPTEVTMVSLLSACAHLGALDMG-EWIHGYIRTKRLKIDVVLGNALIDMYC 179
Query: 379 RAGHLKEA 386
+ G L+ A
Sbjct: 180 KCGALEAA 187
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 149/451 (33%), Positives = 232/451 (51%), Gaps = 38/451 (8%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN ++ G+ + EAV +F M +G P T VL A + + G QV
Sbjct: 206 VSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGY 265
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM------------------------ 190
V K GL SD + + ++ YG C ++ +VFD++
Sbjct: 266 VIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTA 325
Query: 191 -----------CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
E +VV+W II C +N EA+ F M+ G EP+ T+ ++ A
Sbjct: 326 LEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPA 385
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C + L GK +H + RG + +G+ALIDMYAKCG + AR F +M +N+ +W
Sbjct: 386 CGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSW 445
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+A++ G A HG A+E +E+F M S P+ VTF VL AC G+ E+G+R ++ M
Sbjct: 446 NAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSE 505
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
HGI+P HY + +L+R G L+EAY+ I MPF+P+ V ALLS+ +H+
Sbjct: 506 EHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHN---NLS 562
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
+G +L LEP N ++++N YA G+W++ + +R MK+ GL+K G SW+E+G
Sbjct: 563 LGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNPGYSWIEVG 622
Query: 480 GSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+H +G S ++ I + L+ LN+ MK
Sbjct: 623 HKVHMLLAGDQSHPQMKDILEKLDKLNMQMK 653
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 168/371 (45%), Gaps = 38/371 (10%)
Query: 30 QCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
QCLS S+ Q HA I L +D Q+ L+ F + S + L +++
Sbjct: 7 QCLSSSTASLSQAR--QAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHL 64
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+++LI +A S + F + + P F P +K+CA + L+ G
Sbjct: 65 PHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQ 124
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV------------- 196
Q+ A SG +D ++L Y C R DA K+FD M +R VV
Sbjct: 125 QLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLG 184
Query: 197 ----------------------SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTML 234
SWN ++ N + EAVG F M GF PD +T+
Sbjct: 185 LVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVS 244
Query: 235 VVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI 294
VL A L ++ +G VH +I++G + + +A++DMY KCG V +F +EE+
Sbjct: 245 CVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEM 304
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYF 354
+ + +A + GL+++G + ALE+F+ K+ + N VT+ ++ +C+ G + F
Sbjct: 305 EIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELF 364
Query: 355 HEMEHVHGIKP 365
+M+ +G++P
Sbjct: 365 RDMQ-AYGVEP 374
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 149/469 (31%), Positives = 251/469 (53%), Gaps = 7/469 (1%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H Q+ L +D I L+ ++ +L AR L + + W ++I GY
Sbjct: 101 LHGQVVKYMLHSDLYIETTLLNM--YAACGDLKSAR-FLFERMGHRNKVVWTSMISGYMK 157
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+ P EA+ ++ M+ G P E T ++ ACAE+ L GM++ +++ + +
Sbjct: 158 NHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVL 217
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD-LG 225
+ LV Y C + A +VFD + ++ V +W+ +I V+N EA+ F ++
Sbjct: 218 GSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSN 277
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
P+E T+L V+SAC +LG+L G+WVH + + L +LIDM++KCG + A+
Sbjct: 278 MRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAK 337
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F M ++ +W++M+ G A HG EAL F M+ + + P+ +TF+GVL AC+HAG
Sbjct: 338 RIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAG 397
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+V++G + F+E+E ++G++ HY M D+L RAG L EA FI MP QP+ + ++
Sbjct: 398 LVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSM 457
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
L A +++ +G E R LL+LEP ++++N YA+ MW +V VR M
Sbjct: 458 LGACRVYN---NLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEK 514
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
G++K G S V + H F +G S E+A I +L + +K+ +
Sbjct: 515 GIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGY 563
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 192/376 (51%), Gaps = 17/376 (4%)
Query: 53 VSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPRE 112
V+G + L +L+ S + YA S+ + V + WN+++R + S+ PR
Sbjct: 3 VTGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRELDV-LTWNSMLRAFVNSNMPRR 61
Query: 113 AVWVFIDMKRRGIK-PTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLV 171
A+ + +M R P FT+P +LK CA + G + V K L SD+Y L+
Sbjct: 62 ALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLL 121
Query: 172 RFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDET 231
Y +C + A +F+ M R+ V W +I+ ++N EA+ + KM++ GF PDE
Sbjct: 122 NMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEV 181
Query: 232 TMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM 291
TM ++SAC EL +L +G +H + E + LG+AL++MYAKCG + AR +F ++
Sbjct: 182 TMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKL 241
Query: 292 EEINVWTWSAMILGLAQHGYAEEALELFSNMK-NSSISPNYVTFLGVLCACNHAGMVEDG 350
+ +V+ WSA+I G ++ + EAL+LF + S++ PN VT L V+ AC G +E G
Sbjct: 242 SDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETG 301
Query: 351 ---YRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLS 407
+ Y + H + +++ D+ ++ G + A +M ++ L+S
Sbjct: 302 RWVHDYITRTQKGHSVSL----NNSLIDMFSKCGDIDAAKRIFDSMSYKD-------LIS 350
Query: 408 ASSIHDAKYQDGVGNE 423
+S+ + G+G E
Sbjct: 351 WNSMVNGFALHGLGRE 366
>gi|242050128|ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 165/506 (32%), Positives = 257/506 (50%), Gaps = 37/506 (7%)
Query: 40 SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNN 99
+++H +H GL + L+ + +S+ +L +R V+ +V + WN+
Sbjct: 127 AREHALAVHGVALRLGLVGQVFVGNALLH--SYASAGSLGDSRRFFDEMVDRNV-VSWNS 183
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
+I GYA + RE +F +M+R+G EFT +L AC++ L G V + SG
Sbjct: 184 MIGGYAQAGDTREVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGNLEIGRLVHCRMLVSG 243
Query: 160 LDSDVYTNNNLVRFYGSC------RRKRDACKV-------------------------FD 188
D+ + LV YG C RR + + FD
Sbjct: 244 SRVDLILESALVDMYGKCGDLWMARRCFEMMPIKSVVSWTSMLCAQTKHGSVNAARCWFD 303
Query: 189 DMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSL 248
M ER++VSWN +I+ V+ EA+ + +M+ G PDE T++ VLSA +G+L++
Sbjct: 304 HMPERNIVSWNAMISCYVQRGQCHEALDLYNQMQSQGLAPDEITLVAVLSASGRIGDLTV 363
Query: 249 GKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ 308
GK VHL + + + L +L+DMYAKCG V A LFS M NV +W+ +I GLA
Sbjct: 364 GKMVHLYIRDNIYNPDVSLVNSLLDMYAKCGQVDTAISLFSEMCNRNVVSWNVIIGGLAM 423
Query: 309 HGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRI 368
HG A + + F +M S +P+ +TF+ +L AC+H G++E G YF M HV+ +K
Sbjct: 424 HGRALDTITFFRSMVTDSFAPDGITFVALLSACSHGGLLETGQHYFESMRHVYNVKHEVE 483
Query: 369 HYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRL 428
HY M D+L R GHL++A I MP +P+ +V ALL A IH +G +V ++L
Sbjct: 484 HYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHG---NVKIGRQVIKQL 540
Query: 429 LELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
LELE V+++N E WE + +R+ MK G +K G+S +E+ SIH F
Sbjct: 541 LELEGISGGLFVLISNLLYETHQWEDMKRLRKLMKEWGTRKDMGVSSIEINNSIHEFGVE 600
Query: 489 YDSQVELAGIYQILETLNLHMKVLNF 514
+ IY +++ L+ H+ L+
Sbjct: 601 DIRHERSSEIYAVVDQLSYHLISLHL 626
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 191/397 (48%), Gaps = 44/397 (11%)
Query: 34 FLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKN--LTYARSILCNYVND 91
L+ C S + L Q+HA + V G + A L L +C L+ + + L +AR + D
Sbjct: 17 LLRQCRSIQRLNQLHAHLLVHGSLSAASDLL-LASYCALAKAGHGVLCHARRLF-----D 70
Query: 92 SVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+P P +N +IR Y S PREA+ + M RRGI P EFT PFV+KAC
Sbjct: 71 GIPGPDRVMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPFVVKACTIAQAREH 130
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
+ V + GL V+ N L+ Y S D+ + FD+M +R+VVSWN +I +
Sbjct: 131 ALAVHGVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMIGGYAQ 190
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
E F +M+ GF DE T++ +L AC++ GNL +G+ VH +++ G+ ++ L
Sbjct: 191 AGDTREVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLIL 250
Query: 268 GTALIDMYAKC-------------------------------GAVGCARLLFSRMEEINV 296
+AL+DMY KC G+V AR F M E N+
Sbjct: 251 ESALVDMYGKCGDLWMARRCFEMMPIKSVVSWTSMLCAQTKHGSVNAARCWFDHMPERNI 310
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
+W+AMI Q G EAL+L++ M++ ++P+ +T + VL A G + G + H
Sbjct: 311 VSWNAMISCYVQRGQCHEALDLYNQMQSQGLAPDEITLVAVLSASGRIGDLTVG-KMVHL 369
Query: 357 MEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
+ P +++ D+ A+ G + A + M
Sbjct: 370 YIRDNIYNPDVSLVNSLLDMYAKCGQVDTAISLFSEM 406
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 160/495 (32%), Positives = 252/495 (50%), Gaps = 14/495 (2%)
Query: 21 NSDLLSKARQCLSFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVR-FCTLSSSK 76
+ +L R +F+ C K+L +IHA + S DA + L+ +C S
Sbjct: 44 SGELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGS-- 101
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
+ A + N + + W +LI GYA +D P EA+ + M + KP FT+ +L
Sbjct: 102 -VVEAHKVFDKMRNKDM-VSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLL 159
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
KA + G Q+ A K DVY + L+ Y C + A VFD + ++ V
Sbjct: 160 KAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGV 219
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
SWN +I+ A+ F +M+ GFE T + SA +G L GKWVH +
Sbjct: 220 SWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHM 279
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
I+ L +G ++DMYAK G++ AR +F R+ ++ TW++M+ AQ+G +EA+
Sbjct: 280 IKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAV 339
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
F M+ S I N ++FL +L AC+H G+V++G YF +M + ++P HY T+ D+
Sbjct: 340 SHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYF-DMIKEYNLEPEIEHYVTVVDL 398
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRG 435
L RAG L A FI MP +P V ALL+A +H +AK VG + +L+P
Sbjct: 399 LGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAK----VGQFAADHVFQLDPDD 454
Query: 436 SQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVEL 495
S V++ N YA G W+ + VR+ MK G+KK SWVE+ S+H F + D+
Sbjct: 455 SGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRA 514
Query: 496 AGIYQILETLNLHMK 510
IY++ + +++ ++
Sbjct: 515 EEIYKMWDEISMKIR 529
>gi|15228954|ref|NP_191214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180975|sp|Q9LXY5.1|PP284_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g56550
gi|7594533|emb|CAB88058.1| putative protein [Arabidopsis thaliana]
gi|91806586|gb|ABE66020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646013|gb|AEE79534.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 581
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 152/490 (31%), Positives = 265/490 (54%), Gaps = 15/490 (3%)
Query: 24 LLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARS 83
+ KAR + L+ C S K L +IH+ + ++GLQ+ I L+RFC +S + +L++A+
Sbjct: 1 MCEKARVIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQL 60
Query: 84 ILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGI-KPTEFTYPFVLKACAEI 142
+ ++ +D WN LIRG++ S P ++ + M + +P FT+ F LK+C I
Sbjct: 61 LFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERI 120
Query: 143 SGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII 202
+ + +++ +V +SG D +LVR Y + A KVFD+M R +VSWNV+I
Sbjct: 121 KSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMI 180
Query: 203 TVCVENLWL-GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGT 261
C ++ L +A+ + +M + G D T++ +LS+C + L++G +H +
Sbjct: 181 C-CFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACD--- 236
Query: 262 VLNCQ----LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALE 317
+ C+ + ALIDMYAKCG++ A +F+ M + +V TW++MI+G HG+ EA+
Sbjct: 237 -IRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAIS 295
Query: 318 LFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL 377
F M S + PN +TFLG+L C+H G+V++G +F M + P HY M D+
Sbjct: 296 FFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLY 355
Query: 378 ARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
RAG L+ + I +P++ R LL + IH +G ++L++LE +
Sbjct: 356 GRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHR---NLELGEVAMKKLVQLEAFNAG 412
Query: 438 NLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAG 497
+ V++ + Y+ + +++R+ +++ L+ + G SW+E+G +H+F E A
Sbjct: 413 DYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAV 472
Query: 498 IYQIL-ETLN 506
IY L E +N
Sbjct: 473 IYSELGEVIN 482
>gi|298205169|emb|CBI17228.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 163/473 (34%), Positives = 251/473 (53%), Gaps = 37/473 (7%)
Query: 43 HLYQIHAQIQVSGLQNDAQILKELVRF-CTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
L+QIHAQI + L ++++++ +L+ C+L K+L YA SI + + ++ + +N LI
Sbjct: 55 QLHQIHAQIFLHNLFSNSRVVTQLISSSCSL---KSLDYALSIFRCFDHPNLFV-FNALI 110
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
RG A + R +V F+ M R I+P T PFVLK+ A + + G + V K GL+
Sbjct: 111 RGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLE 170
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCER----SVVSWNVIITVCVENLWLGEAVGY 217
D + +LV Y ++FD+ +R S++ WN
Sbjct: 171 FDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWN------------------ 212
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
G P++ T++ L ACT++G L +G+ +H L G LN +GTAL+DMYAK
Sbjct: 213 -------GVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAK 265
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CG + A +F + ++ TWS MI G A HG ++AL+ F MK++ I+P+ V FL +
Sbjct: 266 CGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAI 325
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
L AC+H+G V+ G +F M + I+P HY + D+L RAG L EA +FI +MP P
Sbjct: 326 LTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINP 385
Query: 398 NPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSN 457
+ ++ AL A H + E +LL+LEP+ + V ++N YA VG WE V
Sbjct: 386 DFVIWGALFCACRAHKNIEMAELTAE---KLLQLEPKHPGSYVFLSNVYAAVGRWEDVER 442
Query: 458 VRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
VR MKN G++K G S++E+ G +H F +G + V I LE + K
Sbjct: 443 VRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAK 495
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 168/466 (36%), Positives = 243/466 (52%), Gaps = 19/466 (4%)
Query: 43 HLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPWN 98
H Q+H+ I G DA I + ++ A + D +P + WN
Sbjct: 263 HGQQLHSLIHKHGF--DANIFVGTALVDMYAKCADMHSAVRVF-----DQMPERNLVSWN 315
Query: 99 NLIRGYAWSDRPREAVWVFID-MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
++I G+ ++ AV VF D ++ + + P E + VL ACA + GLN G QV V K
Sbjct: 316 SMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVK 375
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
GL Y N+L+ Y CR + K+F + +R VV+WNV++ V+N EA Y
Sbjct: 376 YGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNY 435
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN-CQLGTALIDMYA 276
F M+ G PDE + VL + L L G +H Q+I+ G V N C LG+ LI MYA
Sbjct: 436 FWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGS-LITMYA 494
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KCG++ A +F +E+ NV +W+AMI HG A + +ELF +M + I P++VTF+
Sbjct: 495 KCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVC 554
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
VL AC+H G VE+G +F+ M+ +H + P HY M D+L RAG L EA FI +MP +
Sbjct: 555 VLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMK 614
Query: 397 PNPIVLRALLSASSIHDAKYQD-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKV 455
P P V ALL A KY + +G E RL E+EP N V++AN G E+
Sbjct: 615 PTPSVWGALLGACR----KYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEA 670
Query: 456 SNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQI 501
+ VRR M G++K G SW+++ F + S IY++
Sbjct: 671 NEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKM 716
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 176/379 (46%), Gaps = 4/379 (1%)
Query: 40 SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNN 99
S KH QIH QI ++ + + L+ N + ++ ++ + W +
Sbjct: 157 SLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTI-VTWTS 215
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
LI + + +A+ +F M+ G P +FT+ +L A A + G Q+ + + K G
Sbjct: 216 LITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHG 275
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
D++++ LV Y C A +VFD M ER++VSWN +I N AVG F
Sbjct: 276 FDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFK 335
Query: 220 K-MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
+++ P+E ++ VLSAC +G L+ G+ VH +++ G V + +L+DMY KC
Sbjct: 336 DVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKC 395
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
LF + + +V TW+ +++G Q+ EEA F M+ I P+ +F VL
Sbjct: 396 RFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVL 455
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
+ + G ++ + +K M I ++ + A+ G L +AY + N
Sbjct: 456 HSSASLAALHQGTAIHDQIIKLGYVKNMCI-LGSLITMYAKCGSLVDAYQVFEGIE-DHN 513
Query: 399 PIVLRALLSASSIHDAKYQ 417
I A++SA +H Q
Sbjct: 514 VISWTAMISAYQLHGCANQ 532
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 154/480 (32%), Positives = 251/480 (52%), Gaps = 12/480 (2%)
Query: 31 CLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
C S L C + Q+H I SG ++ + LV + +L A+++L +
Sbjct: 275 CSSVLARCFGE----QVHGFIVKSGFGSNVYVQSALVDM--YAKCGDLKNAKNMLETMED 328
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
D V + WN+L+ G+ EA+ +F +M R +K ++T+P VL C + G
Sbjct: 329 DDV-VSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCC--VVGSINPKS 385
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
V + K+G ++ +N LV Y A VF+ M E+ V+SW ++T +N
Sbjct: 386 VHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNS 445
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
E++ F M+ G PD+ + +LSAC EL L GK VHL I+ G + + +
Sbjct: 446 HEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNS 505
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
L+ MYAKCG + A +F M+ +V TW+A+I+G AQ+G +L+ + M +S P+
Sbjct: 506 LVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPD 565
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
++TF+G+L AC+HAG+V++G +YF +M V+GIKP HY M D+ R+G L EA +
Sbjct: 566 FITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLL 625
Query: 391 MNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVG 450
M +P+ V ++LLSA +H+ + L ELEP + V+++N Y+
Sbjct: 626 DQMDVKPDATVWKSLLSACRVHE---NLELAERAATNLFELEPMNAMPYVMLSNMYSASR 682
Query: 451 MWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
W V+ +R+ MK+ G+ K G SW+E+ ++ F S A IY ++ + L +K
Sbjct: 683 KWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIK 742
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 143/284 (50%), Gaps = 5/284 (1%)
Query: 112 EAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLV 171
EA +F M+ G K ++FT VL+ C+ + + G + V K+G + +V+ LV
Sbjct: 145 EAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLV 204
Query: 172 RFYGSCRRKRDACKVFD--DMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPD 229
Y C+ +A +F + ++ V W ++T +N +AV +F M G E +
Sbjct: 205 DMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECN 264
Query: 230 ETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFS 289
+ T +L+AC+ + G+ VH +++ G N + +AL+DMYAKCG + A+ +
Sbjct: 265 QYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLE 324
Query: 290 RMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVED 349
ME+ +V +W+++++G +HG EEAL LF NM ++ + TF VL C +
Sbjct: 325 TMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSI--- 381
Query: 350 GYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
+ H + G + ++ + + D+ A+ G + AYT M
Sbjct: 382 NPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKM 425
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 225/416 (54%), Gaps = 9/416 (2%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACA--EISGLNEGMQVQ 152
+PW+ +I + + +AV +FI M+ + P EFT +L CA + SGL E Q+
Sbjct: 314 VPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGE--QLH 371
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
V K G D DVY +N L+ Y C + A K+F ++ ++VVSWN +I V ENL G
Sbjct: 372 GLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVI-VGYENLGEG 430
Query: 213 -EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
+A+ F + E T L AC L ++ LG VH I+ + +L
Sbjct: 431 GKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSL 490
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
IDMYAKCG + A+ +F+ ME I+V +W+A+I G + HG +AL +F MK S PN
Sbjct: 491 IDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNG 550
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
+TFLGVL C++AG+++ G F M HGI+P HY M + R+G L +A I
Sbjct: 551 LTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIE 610
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGM 451
+P++P+ ++ RA+LSAS +Y + +L++ P+ V+++N YA
Sbjct: 611 GIPYEPSVMIWRAMLSASM---NQYNEEFARRSAEEILKINPKDEATYVLLSNMYAGAKQ 667
Query: 452 WEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNL 507
W V+++R+ MK G+KK G+SW+E G +H F G ++ I +LE LN+
Sbjct: 668 WANVASIRKSMKEKGVKKEPGLSWIEHQGDVHFFSVGSSDHPDMKLINGMLEWLNM 723
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 184/402 (45%), Gaps = 24/402 (5%)
Query: 33 SFLKLCCS---KKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARS----IL 85
SFLKL S + + +H+ I G ++A + L+ ++ S + ARS IL
Sbjct: 151 SFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGS--VDSARSVFEGIL 208
Query: 86 CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL 145
C + + W ++ Y + +++ + M G P +T+ LKA +
Sbjct: 209 CKDI-----VVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAF 263
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
+ V + K+ + D L++ Y DA KVF++M + VV W+ +I
Sbjct: 264 HFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARF 323
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLS-LGKWVHLQLIERGTVLN 264
+N + +AV F++M++ P+E T+ +L+ C +G S LG+ +H +++ G L+
Sbjct: 324 CQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCA-IGKCSGLGEQLHGLVVKVGFDLD 382
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+ ALID+YAKC + A LF+ + NV +W+ +I+G G +AL +F
Sbjct: 383 VYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALR 442
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ +S VTF L AC +E G + + K + + +++ D+ A+ G +K
Sbjct: 443 NQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVS-NSLIDMYAKCGDIK 501
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRR 426
A T M + AL+S S H G+G + R
Sbjct: 502 VAQTVFNEME-TIDVASWNALISGYSTH------GLGRQALR 536
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 111/247 (44%), Gaps = 4/247 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ + L +GYA D V ++ + R G + + LK + + +
Sbjct: 116 VSYVTLTQGYACQD----PVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICWWLHSP 171
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ K G DS+ + L+ Y C A VF+ + + +V W I++ VEN ++
Sbjct: 172 IVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDS 231
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ +M GF P+ T L A LG K VH Q+++ L+ ++G L+ +
Sbjct: 232 LQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQL 291
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y + G + A +F+ M + +V WS MI Q+G+ +A+++F M+ + PN T
Sbjct: 292 YTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTL 351
Query: 335 LGVLCAC 341
+L C
Sbjct: 352 SSILNGC 358
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 117/271 (43%), Gaps = 19/271 (7%)
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
Y +L+ C + + ++ K G D++ N L+ Y +DA +FD+M
Sbjct: 51 AYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEM 110
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
ER+ VS+ V +T + + VG + ++ G E + L L +
Sbjct: 111 PERNNVSY-VTLT---QGYACQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICW 166
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
W+H +++ G N +G ALI+ Y+ CG+V AR +F + ++ W+ ++ ++G
Sbjct: 167 WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENG 226
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
E++L+L S M PN TF L A G FH + VHG + ++ Y
Sbjct: 227 CFEDSLQLLSRMGMDGFMPNNYTFDTALKA-------SIGLGAFHFAKSVHG-QILKTCY 278
Query: 371 H-------TMADILARAGHLKEAYTFIMNMP 394
+ + + G + +A+ MP
Sbjct: 279 ELDPRVGVGLLQLYTQLGDMSDAFKVFNEMP 309
>gi|388518129|gb|AFK47126.1| unknown [Medicago truncatula]
Length = 447
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 150/431 (34%), Positives = 228/431 (52%), Gaps = 12/431 (2%)
Query: 50 QIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV-NDSVPIPWNNLIRGYAWSD 108
Q ++ + ++ L+ T N YA +L ++ ++ WNN+IR Y +
Sbjct: 17 QHSITSGNDPVTVIATLLSNTTRIRDLNQIYAHILLTRFLESNPASFNWNNIIRSYTRLE 76
Query: 109 RPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNN 168
P+ A+ +++ M R G+ P +T P VLKA ++ + G QV + K GL S+ Y +
Sbjct: 77 SPQNALRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQVHSYGIKLGLQSNEYCES 136
Query: 169 NLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEP 228
+ Y A KVFD+ E + SWN +I+ + +A+ FV MK GFEP
Sbjct: 137 GFINLYCKAGDFDSAHKVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEP 196
Query: 229 DETTMLVVLSACTELGNLSLGKWVHLQLIERGT-----VLNCQLGTALIDMYAKCGAVGC 283
D TM+ V+ AC +G+L L +H + + T +L + +LIDMY KCG +
Sbjct: 197 DGITMVSVMCACGSIGDLYLALQLHKYVFQAKTNEWTVIL---MSNSLIDMYGKCGRMDL 253
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A +F+ ME+ NV +W++MI+G A HG+A+EAL F M+ S + PNYVTF+GVL AC H
Sbjct: 254 AYEVFATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVH 313
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
G V++G YF M++++GI P HY M D+L RAG +A + MP +PN +V
Sbjct: 314 GGTVQEGRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVEEMPMKPNSVVWG 373
Query: 404 ALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMK 463
L+ A H + V L LEP V+++N YA G+W++V +R FMK
Sbjct: 374 CLMGACEKHG---NVDMAEWVAENLQALEPWNEGVYVVLSNIYANKGLWKEVERIRSFMK 430
Query: 464 NVGLKKMKGMS 474
L K+ S
Sbjct: 431 EGRLAKIPAYS 441
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 146/421 (34%), Positives = 222/421 (52%), Gaps = 4/421 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN+LI GYA P A+ +F ++ I P T V+ ACA ++ L++G +
Sbjct: 497 VTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGL 556
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVCVENLWLGE 213
+ K G +SD + N L+ Y C A +F+ + V+WNVII ++N E
Sbjct: 557 IVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKE 616
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
A+ F +M+ F P+ T + VL A L G H +I+ G + N +G +LID
Sbjct: 617 AISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLID 676
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MYAKCG + + LF+ M+ + +W+AM+ G A HG+ + A+ LFS M+ S + + V+
Sbjct: 677 MYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVS 736
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
F+ VL AC HAG+VE+G + FH M + IKP HY M D+L RAG E FI M
Sbjct: 737 FVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVM 796
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
P +P+ V ALL + +H +G L++LEPR + V++++ YA+ G W
Sbjct: 797 PVEPDAGVWGALLGSCRMHS---NVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWA 853
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLN 513
R M ++GLKK G SWVEL +H F G S +L ++ + TL M+ +
Sbjct: 854 DAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIG 913
Query: 514 F 514
+
Sbjct: 914 Y 914
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 172/349 (49%), Gaps = 18/349 (5%)
Query: 6 VPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKE 65
+ T FP S+ ++ L R L C L QIHAQI VSG ++ I
Sbjct: 14 IATAASEFPSLSSSTYTNYLHYPR----LLSSCKHLNPLLQIHAQIIVSGFKHHHSI-TH 68
Query: 66 LVRFCTLSSSKNLTYARSILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMK 121
L+ +L +L ARS+ DS P P WN++IR Y S + EA+ ++ M
Sbjct: 69 LINLYSLFHKCDL--ARSVF-----DSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMV 121
Query: 122 RRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKR 181
+G++P ++T+ FVLKAC L EG+ + + GL+ DV+ LV Y +
Sbjct: 122 EKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLK 181
Query: 182 DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
A +VFD M +R VV+WN +I ++ EAV +F M+ +G EP ++L +
Sbjct: 182 RAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGIC 241
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
+L N+ L + +H + R + + LID+Y+KCG V AR +F +M + + +W
Sbjct: 242 KLSNIELCRSIHGYVFRRD--FSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGT 299
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
M+ G A +G E LELF MK ++ N V+ + A +E G
Sbjct: 300 MMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKG 348
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 170/361 (47%), Gaps = 3/361 (0%)
Query: 73 SSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
S ++ AR + V D + W ++ GYA + E + +F MK ++ + +
Sbjct: 274 SKCGDVDVARRVFDQMV-DQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSA 332
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
A AE L +G ++ + +DSD+ L+ Y C A ++F +
Sbjct: 333 VSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQG 392
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
R +V+W+ II V+ + EA+ F +M++ +P+ T++ +L AC +L L LGK +
Sbjct: 393 RDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSI 452
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H ++ + GTAL+ MYAKCG A F+RM ++ TW+++I G AQ G
Sbjct: 453 HCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDP 512
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
A+++F ++ S+I+P+ T +GV+ AC ++ G H + G + +
Sbjct: 513 YNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQG-TCIHGLIVKLGFESDCHVKNA 571
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELE 432
+ D+ A+ G L A F + + ++ A+ + + ++ + + + RL
Sbjct: 572 LIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVII-AAYMQNGHAKEAISSFHQMRLENFH 630
Query: 433 P 433
P
Sbjct: 631 P 631
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 149/323 (46%), Gaps = 16/323 (4%)
Query: 35 LKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LK C +L + H +I GL+ D I LV S +L AR + D
Sbjct: 136 LKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDM--YSKMGDLKRAREVF-----D 188
Query: 92 SVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+P + WN +I G + S+ P EAV F M+ G++P+ + + ++S +
Sbjct: 189 KMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIEL 248
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
+ V + S V +N L+ Y C A +VFD M ++ VSW ++
Sbjct: 249 CRSIHGYVFRRDFSSAV--SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAH 306
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
N E + F KMK ++ + + A E +L GK +H +++ + +
Sbjct: 307 NGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILV 366
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
T L+ MYAKCG A+ LF ++ ++ WSA+I L Q GY EEAL LF M+N +
Sbjct: 367 ATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKM 426
Query: 328 SPNYVTFLGVLCACNHAGMVEDG 350
PN VT + +L AC +++ G
Sbjct: 427 KPNRVTLMSILPACADLSLLKLG 449
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
+LS+C L L +H Q+I G + + T LI++Y+ AR +F +
Sbjct: 38 LLSSCKHLNPL---LQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPS 93
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
W++MI + EALE++ M + P+ TF VL AC A +++G +FH
Sbjct: 94 RILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGV-WFH 152
Query: 356 EMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
G++ + D+ ++ G LK A MP
Sbjct: 153 GEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMP 191
>gi|449435950|ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 606
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 135/416 (32%), Positives = 223/416 (53%), Gaps = 4/416 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W LI G+ + F M + P F++ +ACA IS + G Q+ A
Sbjct: 177 VSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAA 236
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
VTK GL D N+++ Y C DA + F ++ E+++++WN +I E E+
Sbjct: 237 VTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLI-AGYERSDSSES 295
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M G++P+ T + +AC L LS G+ VH ++ RG N L +LIDM
Sbjct: 296 LSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDM 355
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG++ + LF M ++ +W+ M++G HGY +EA++LF M S I P+ + F
Sbjct: 356 YAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVF 415
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+GVLC C+HAG+V+ G +YF M + I P + Y + D+L RAG ++EA+ + NMP
Sbjct: 416 MGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMP 475
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
F+P+ V ALL A + +GN +R+L+ P + ++++ YA G W +
Sbjct: 476 FEPDESVWGALLGACKAYKLS---NLGNLAAQRVLDRRPNMAGTYLLLSKIYAAEGKWGE 532
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+ +R+ MK + KK G SW+E+ ++ F G + ++++++ L HMK
Sbjct: 533 FAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVHKVIDVLIWHMK 588
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 164/371 (44%), Gaps = 16/371 (4%)
Query: 76 KNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFV 135
K LT L N + + + W +I G+ + +A +F +M R ++P FT V
Sbjct: 56 KGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPNAFTMSSV 115
Query: 136 LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFY-GSCRRKRDACKVFDDMCERS 194
LKAC + L+ G + TK G+D VY N L+ Y SC DA VF+D+ ++
Sbjct: 116 LKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLKT 175
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE---PDETTMLVVLSACTELGNLSLGKW 251
VSW +I G+ + + + E P+ + + AC + + S GK
Sbjct: 176 AVSWTTLIAGFTHR---GDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQ 232
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+H + + G + + +++DMY +C + A+ F + E N+ TW+ +I G +
Sbjct: 233 IHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGY-ERSD 291
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
+ E+L LF M + PN TF + AC + ++ G + H G +
Sbjct: 292 SSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCG-QQVHGGIVRRGFDKNVALIN 350
Query: 372 TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLEL 431
++ D+ A+ G + +++ +MP R L+S +++ G G E + E+
Sbjct: 351 SLIDMYAKCGSISDSHKLFCDMPG-------RDLVSWTTMMIGYGAHGYGKEAVKLFDEM 403
Query: 432 EPRGSQNLVIV 442
G Q IV
Sbjct: 404 VQSGIQPDRIV 414
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 1/175 (0%)
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
NL++ Y R+AC +F+++ ER VV+W +I +A F +M +
Sbjct: 47 TNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQ 106
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY-AKCGAVGCARL 286
P+ TM VL AC + LS G H + G + + AL+DMY A C + A
Sbjct: 107 PNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALS 166
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
+F+ + +W+ +I G G L F M + PN +F AC
Sbjct: 167 VFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARAC 221
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 80/201 (39%), Gaps = 5/201 (2%)
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
T LI Y G A LF+ + E +V TW+AMI+G + +A +FS M S +
Sbjct: 46 ATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEV 105
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARA-GHLKEA 386
PN T VL AC + G H + HGI + + D+ A + + +A
Sbjct: 106 QPNAFTMSSVLKACKGMKALSCG-ALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDA 164
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKY 446
+ ++P + V L A H G+ R+ LLE S + I A
Sbjct: 165 LSVFNDIPLK--TAVSWTTLIAGFTHRGDGYSGL-LAFRQMLLEDVGPNSFSFSIAARAC 221
Query: 447 AEVGMWEKVSNVRRFMKNVGL 467
A + + + + GL
Sbjct: 222 ASISSYSCGKQIHAAVTKYGL 242
>gi|297820424|ref|XP_002878095.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323933|gb|EFH54354.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 651
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 153/485 (31%), Positives = 256/485 (52%), Gaps = 11/485 (2%)
Query: 27 KARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILC 86
KAR + L+ C S L +IH+ + ++GL + I L+RFC +S + +L+YA+ +
Sbjct: 4 KARVIVRMLQGCNSMNKLRKIHSHVIINGLHHHPSIFNHLLRFCAVSVNGSLSYAQLLFD 63
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGI-KPTEFTYPFVLKACAEISGL 145
+ +D WN LIRG++ S P + + M + +P FT+ F LKAC I +
Sbjct: 64 RFDSDPSTSAWNYLIRGFSISSSPLYTILYYNRMLLSSVSRPDIFTFSFALKACERIRLI 123
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
+ +++ +V +SG +D + NLVR Y + A KVFD+M R +VSWN +I+
Sbjct: 124 PKCLELHGSVIRSGFLADAIVSTNLVRCYSANGSVEIASKVFDEMPVRDLVSWNAMISCF 183
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE---RGTV 262
+A + +M + G D T++ +LS+C + L++G +H + +V
Sbjct: 184 SHAGLHHQAFSMYSRMANEGVCVDAYTIVALLSSCAHVSALNMGVMLHRIACDIRCESSV 243
Query: 263 LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM 322
C ALIDMYAKCG++ A +F M + +V TW++MI+G HG+ EA+ F M
Sbjct: 244 FVCN---ALIDMYAKCGSLENAVGVFKGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKM 300
Query: 323 KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGH 382
S + PN VTFLG+L C+H G+V++G +F M + P HY M D+ RAG
Sbjct: 301 VASGVRPNAVTFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLFGRAGQ 360
Query: 383 LKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIV 442
L++A I +P++ R LL + IH +G ++L++LE + + V++
Sbjct: 361 LEKALEMIHTSSCHEDPVLWRTLLGSCKIHR---NLELGEVAMKKLVQLEAFNAGDYVLM 417
Query: 443 ANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQIL 502
+ Y+ + +++R+ +++ L+ + G SW+E+G +H+F E A IY L
Sbjct: 418 TSIYSAANDAQGFASMRKLIRSHDLRTIPGWSWIEIGDQVHKFVIDDKMHPESALIYSEL 477
Query: 503 -ETLN 506
E +N
Sbjct: 478 GEVIN 482
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 138/404 (34%), Positives = 219/404 (54%), Gaps = 9/404 (2%)
Query: 91 DSVPI----PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P+ WN +I GYA + +EA+ +F +M + +KP E T V+ ACA+ +
Sbjct: 193 DEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQ 252
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G QV + + GL S++ N L+ Y C AC +F + + V+SWN +I
Sbjct: 253 LGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYT 312
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER--GTVLN 264
EA+ F +M G P++ TML +L AC +LG + G+W+H+ + +R G
Sbjct: 313 HLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNA 372
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
L T+LIDMYAKCG + A +F+ M + +AMI G A HG A A ++FS M+
Sbjct: 373 SSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRK 432
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ I P+ +TF+G+L AC+H+GM++ G R F M + I P HY M D+L G K
Sbjct: 433 NGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFK 492
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
EA I M +P+ ++ +LL A +H +G ++L+++EP + V+++N
Sbjct: 493 EAEEMINTMTMEPDGVIWCSLLKACKMHG---NVELGESFAQKLIKIEPENPGSYVLLSN 549
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
YA G W +V+N+R + + G+KK+ G S +E+ +H F G
Sbjct: 550 IYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 593
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 127/396 (32%), Positives = 197/396 (49%), Gaps = 36/396 (9%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSS-KNLTYARSILCNYVN 90
LS L C + + L IHAQ+ +GL N L L+ FC LS + L YA S+ +
Sbjct: 6 LSLLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVF-ETIQ 64
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
+ + WN + RG+A S P A+ +++ M G+ P +T+PF+LK+CA++ EG Q
Sbjct: 65 EPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQ 124
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER----------------- 193
+ +V K G + D+Y + +L+ Y R +DA KVFD R
Sbjct: 125 IHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGY 184
Query: 194 --------------SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
VVSWN II+ + EA+ F +M +PDE+TM+ V+SA
Sbjct: 185 IESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSA 244
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C + G++ LG+ VH + + G N ++ ALID+Y+KCG V A LF + +V +W
Sbjct: 245 CAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISW 304
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM-- 357
+ MI G +EAL LF M S +PN VT L +L AC G ++ G R+ H
Sbjct: 305 NTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFG-RWIHVYID 363
Query: 358 EHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
+ + G+ ++ D+ A+ G ++ A+ +M
Sbjct: 364 KRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM 399
>gi|195647336|gb|ACG43136.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 155/456 (33%), Positives = 236/456 (51%), Gaps = 39/456 (8%)
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D++P + W LI + EA+ ++ M G +P + VL ACA +
Sbjct: 335 VLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSACATLQD 394
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE------------ 192
L G ++ AN K G ++++ +++L+ Y C++ A +VF+ + E
Sbjct: 395 LRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWNSLISG 454
Query: 193 -------------------RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTM 233
R+ VSWN +I+ EN G+A+ YF M G P E T+
Sbjct: 455 YSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGEITL 514
Query: 234 LVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEE 293
VL AC L +L +G+ VH ++++ G N +GTAL DMYAK G + +R +F +M E
Sbjct: 515 SSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALSDMYAKSGDLDSSRRVFYQMPE 574
Query: 294 INVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRY 353
N TW+AM+ GLA++G+AEE++ LF +M + I+PN TFL +L AC+H G+VE Y
Sbjct: 575 KNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFACSHCGLVEQAIHY 634
Query: 354 FHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHD 413
F M+ HGI P HY M D+LARAG L EA +M + + + +LLSA S +
Sbjct: 635 FETMQ-AHGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELDTSSWSSLLSACSTYR 693
Query: 414 AKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGM 473
K +G ++L ELE + V+++N YA G W+ + R M+ LKK G
Sbjct: 694 NKE---IGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAETRILMQGASLKKDAGC 750
Query: 474 SWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
SW++L G H F+S + IY+IL+ L L +
Sbjct: 751 SWLQLRGQYHAFFSWKEKHPLSLEIYEILDLLMLEL 786
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 145/365 (39%), Gaps = 64/365 (17%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
+ +I G+ ++ ++A VF M ++P T V+KAC + M V
Sbjct: 214 FTAMISGFVRNELHKDAFPVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAV 273
Query: 157 KSGL-DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV--------- 206
K L + + +N+L+ Y A +VFDDM R VVSW ++ V
Sbjct: 274 KCNLFEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYADLGDLYGAR 333
Query: 207 ----------ENLW------------LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELG 244
E W EA+ + +M G P+ + VLSAC L
Sbjct: 334 RVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSACATLQ 393
Query: 245 NLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMIL 304
+L G +H ++ G+ N + ++LIDMY KC A+ +F+ + E N W+++I
Sbjct: 394 DLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWNSLIS 453
Query: 305 GLAQHGYAEEALELFSNMK-------NSSIS------------------------PNYVT 333
G + +G EA LF+ M N+ IS P +T
Sbjct: 454 GYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGEIT 513
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
VL AC + +E G R H GI+ ++D+ A++G L + M
Sbjct: 514 LSSVLLACANLCSLEMG-RMVHAEIVKLGIEDNIFMGTALSDMYAKSGDLDSSRRVFYQM 572
Query: 394 PFQPN 398
P + N
Sbjct: 573 PEKNN 577
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 82/197 (41%), Gaps = 36/197 (18%)
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
+ + A+ +SGL +D +NL+ Y + R D + F D CV
Sbjct: 100 LSLHAHAFRSGLTADRSVASNLLTAYAAFTRAADRDQAFRD---------------CVA- 143
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+A F T ++S + G+++ + + + E+ V
Sbjct: 144 ---ADAASSF-------------TYDFMVSEHVKAGDIASARRLFYGMPEKSVVSY---- 183
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
T ++D K G+V A L+ R +V ++AMI G ++ ++A +F M S+
Sbjct: 184 TTMVDALMKRGSVRDAVELYERCPLHSVAFFTAMISGFVRNELHKDAFPVFRKMLTCSVR 243
Query: 329 PNYVTFLGVLCACNHAG 345
PN VT + V+ AC AG
Sbjct: 244 PNVVTLICVIKACVGAG 260
>gi|357114903|ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 611
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 172/506 (33%), Positives = 263/506 (51%), Gaps = 17/506 (3%)
Query: 15 PKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSS 74
P + S + + CL L+ + L Q A + SGL ++ ++ L ++
Sbjct: 18 PASNPTASPSRAAEQHCLRLLERSSTPASLLQSFAFLLKSGLHSNPLVVTRLFAASASAA 77
Query: 75 SKNLTYARSILCNYVNDSVPIPW---NNLIRGYAWSDRP---REAVWVFIDMKRRGIKPT 128
L ++ + + S+P+ N LIR + S P R A F M R + P
Sbjct: 78 PALL---EPLVSSLLGPSLPLDAFLVNTLIRTHVTSPFPSARRRAAAFFPLMLRAAVAPN 134
Query: 129 EFTYPFVLKACAEISGLNE-GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKR---DAC 184
+FT+PF+LK+CA + G + G+Q A K G +D Y +N L+ Y SC DA
Sbjct: 135 KFTFPFLLKSCAALPGSPDVGLQAHAAALKFGFAADHYVSNTLIHMY-SCFGAGFLGDAR 193
Query: 185 KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELG 244
VF+ M S V+W+ +I V +AV F M+ G PDE T++ VL+A +LG
Sbjct: 194 NVFERMPRESAVTWSAMIGGYVRAGLSSDAVVLFRGMQVSGVRPDEVTVIGVLAAAADLG 253
Query: 245 NLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMIL 304
L L +WV + G + L ALID AKCG V A +F MEE V +W+++I
Sbjct: 254 ALELTRWVGRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMEERTVVSWTSVID 313
Query: 305 GLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIK 364
LA G +EA+ +F MK + P+ V F+GVL AC+HAGMV++G YF M+ +GI+
Sbjct: 314 ALAMEGRGKEAVGVFEEMKAVGVLPDDVAFIGVLTACSHAGMVDEGRGYFDSMKTEYGIE 373
Query: 365 PMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEV 424
P HY M D+ RAG +++ F+ MP +PNPI+ R L++A H + +G +
Sbjct: 374 PKIEHYGCMVDMFGRAGMVEQGLEFVRAMPMKPNPIIWRTLVAACRAHG---RLELGESI 430
Query: 425 RRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHR 484
R LL P N V+++N YA W++ S +RR M G+KK+ G S VEL G +H
Sbjct: 431 TRNLLNEFPAHEANYVMLSNVYALTQRWKEKSEIRREMSKRGIKKVPGCSLVELDGEVHE 490
Query: 485 FYSGYDSQVELAGIYQILETLNLHMK 510
F +G +S + IY+++E ++ ++
Sbjct: 491 FIAGDESHPQYKEIYRMVEEMSRELR 516
>gi|7671499|emb|CAB89340.1| putative protein [Arabidopsis thaliana]
Length = 514
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 160/496 (32%), Positives = 259/496 (52%), Gaps = 80/496 (16%)
Query: 53 VSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP----WNNLIRGYAWSD 108
V+GL ++ ++ EL+ +LS L YA + D +P P N+++RG A S
Sbjct: 3 VNGLMSNLSVVGELIYSASLSVPGALKYAHKLF-----DEIPKPDVSICNHVLRGSAQSM 57
Query: 109 RPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNN 168
+P + V ++ +M++RG+ P +T+ FVLKAC+++ + G V + G + Y N
Sbjct: 58 KPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKN 117
Query: 169 NLVRFYGSC------------------------------RRKRD-ACKVFDDMCERSVVS 197
L+ F+ +C R K D A ++FD+M + V+
Sbjct: 118 ALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVA 177
Query: 198 WNVIITVCVE----------------------NLWLG---------EAVGYFVKMKDLGF 226
WNV+IT C++ N + EA+G F +M+D G
Sbjct: 178 WNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGE 237
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-----LNCQLGTALIDMYAKCGAV 281
PD T+L +LSAC LG+L GK +H+ ++E +V + + ALIDMYAKCG++
Sbjct: 238 HPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSI 297
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
A +F +++ ++ TW+ +I+GLA H +AE ++E+F M+ + PN VTF+GV+ AC
Sbjct: 298 DRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILAC 356
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIV 401
+H+G V++G +YF M ++ I+P HY M D+L RAG L+EA+ F+ +M +PN IV
Sbjct: 357 SHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIV 416
Query: 402 LRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRF 461
R LL A I+ NE +LL + S + V+++N YA G W+ V VR+
Sbjct: 417 WRTLLGACKIYGNVELGKYANE---KLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKM 473
Query: 462 MKNVGLKKMKGMSWVE 477
+ +KK G+S +E
Sbjct: 474 FDDTRVKKPTGVSLIE 489
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 164/473 (34%), Positives = 241/473 (50%), Gaps = 19/473 (4%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP--- 94
C S + +IHA++ S L D I +LV + L YA L + D +P
Sbjct: 52 CPSISNCREIHARVFKSLLYRDGFIGDQLV-----TCYNKLGYAEDALKLF--DDMPHKD 104
Query: 95 -IPWNNLIRGYAWSDRPREAVWVFIDMK-RRGIKPTEFTYPFVLKACAEISGLNEGMQVQ 152
+ WN+LI G+ S ++ F MK +KP E T ++ AC L+ G +
Sbjct: 105 LVSWNSLISGF--SRCLHMSLTAFYTMKFEMSVKPNEVTILSMISACN--GALDAGKYIH 160
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
K G +V N+L+ YG AC++F+ + + + VSWN II V N
Sbjct: 161 GFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAR 220
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
E + YF KM+ LG E DE T+L +L AC LG L + +H + G + TAL+
Sbjct: 221 EGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALL 280
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
D YAK G + + +F+ + + W+AM+ G A HG EA++LF +M N + P++V
Sbjct: 281 DTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHV 340
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
TF +L AC+H+G+V +G YF+ M V+GI+P HY M D+L R G L +AY I N
Sbjct: 341 TFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQN 400
Query: 393 MPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMW 452
MP +PN V ALL A +H +G EV L+ +EP +N ++++N Y+ W
Sbjct: 401 MPMEPNAGVWGALLGACRVHG---NIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSW 457
Query: 453 EKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+ + VR +K GLK+ G S +E G H F+ G S E IY LE L
Sbjct: 458 KDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEEL 510
>gi|449508637|ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 594
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 135/416 (32%), Positives = 223/416 (53%), Gaps = 4/416 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W LI G+ + F M + P F++ +ACA IS + G Q+ A
Sbjct: 177 VSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAA 236
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
VTK GL D N+++ Y C DA + F ++ E+++++WN +I E E+
Sbjct: 237 VTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIA-GYERSDSSES 295
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M G++P+ T + +AC L LS G+ VH ++ RG N L +LIDM
Sbjct: 296 LSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDM 355
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG++ + LF M ++ +W+ M++G HGY +EA++LF M S I P+ + F
Sbjct: 356 YAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVF 415
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+GVLC C+HAG+V+ G +YF M + I P + Y + D+L RAG ++EA+ + NMP
Sbjct: 416 MGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMP 475
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
F+P+ V ALL A + +GN +R+L+ P + ++++ YA G W +
Sbjct: 476 FEPDESVWGALLGACKAYKLS---NLGNLAAQRVLDRRPNMAGTYLLLSKIYAAEGKWGE 532
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+ +R+ MK + KK G SW+E+ ++ F G + ++++++ L HMK
Sbjct: 533 FAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVHKVIDVLIWHMK 588
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 164/371 (44%), Gaps = 16/371 (4%)
Query: 76 KNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFV 135
K LT L N + + + W +I G+ + +A +F +M R ++P FT V
Sbjct: 56 KGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPNAFTMSSV 115
Query: 136 LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFY-GSCRRKRDACKVFDDMCERS 194
LKAC + L+ G + TK G+D VY N L+ Y SC DA VF+D+ ++
Sbjct: 116 LKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLKT 175
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE---PDETTMLVVLSACTELGNLSLGKW 251
VSW +I G+ + + + E P+ + + AC + + S GK
Sbjct: 176 AVSWTTLIAGFTHR---GDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQ 232
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+H + + G + + +++DMY +C + A+ F + E N+ TW+ +I G +
Sbjct: 233 IHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGY-ERSD 291
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
+ E+L LF M + PN TF + AC + ++ G + H G +
Sbjct: 292 SSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCG-QQVHGGIVRRGFDKNVALIN 350
Query: 372 TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLEL 431
++ D+ A+ G + +++ +MP R L+S +++ G G E + E+
Sbjct: 351 SLIDMYAKCGSISDSHKLFCDMPG-------RDLVSWTTMMIGYGAHGYGKEAVKLFDEM 403
Query: 432 EPRGSQNLVIV 442
G Q IV
Sbjct: 404 VQSGIQPDRIV 414
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 1/175 (0%)
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
NL++ Y R+AC +F+++ ER VV+W +I +A F +M +
Sbjct: 47 TNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQ 106
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY-AKCGAVGCARL 286
P+ TM VL AC + LS G H + G + + AL+DMY A C + A
Sbjct: 107 PNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALS 166
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
+F+ + +W+ +I G G L F M + PN +F AC
Sbjct: 167 VFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARAC 221
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 80/201 (39%), Gaps = 5/201 (2%)
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
T LI Y G A LF+ + E +V TW+AMI+G + +A +FS M S +
Sbjct: 46 ATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEV 105
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARA-GHLKEA 386
PN T VL AC + G H + HGI + + D+ A + + +A
Sbjct: 106 QPNAFTMSSVLKACKGMKALSCG-ALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDA 164
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKY 446
+ ++P + V L A H G+ R+ LLE S + I A
Sbjct: 165 LSVFNDIPLK--TAVSWTTLIAGFTHRGDGYSGL-LAFRQMLLEDVGPNSFSFSIAARAC 221
Query: 447 AEVGMWEKVSNVRRFMKNVGL 467
A + + + + GL
Sbjct: 222 ASISSYSCGKQIHAAVTKYGL 242
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 148/447 (33%), Positives = 243/447 (54%), Gaps = 39/447 (8%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN++I G+ P +A+ +F M+ +K + T VL ACA+I L G +V +
Sbjct: 200 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSY 259
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS-------------------- 194
+ ++ ++ ++ N ++ Y C DA ++FD M E+
Sbjct: 260 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 319
Query: 195 -----------VVSWNVIITVCVENLWLGEAVGYFVKMK-DLGFEPDETTMLVVLSACTE 242
+V+WN +I+ +N EA+ F +++ + ++ T++ LSAC +
Sbjct: 320 REVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQ 379
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
+G L LG+W+H + + G +N + +ALI MY+KCG + AR +F+ +E+ +V+ WSAM
Sbjct: 380 VGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAM 439
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
I GLA HG EA+++F M+ +++ PN VTF V CAC+H G+V++ F++ME +G
Sbjct: 440 IGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYG 499
Query: 363 IKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGN 422
I P HY + D+L R+G+L++A FI MP P+ V ALL A IH +
Sbjct: 500 IVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIH---ANLSLAE 556
Query: 423 EVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSI 482
RLLELEPR V+++N YA+ G W+ VS +R+ M+ GLKK G S +E+ G I
Sbjct: 557 MACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMI 616
Query: 483 HRFYSGYD----SQVELAGIYQILETL 505
H F SG + S+ +++++E L
Sbjct: 617 HEFLSGDNAHPMSEKVYGKLHEVMEKL 643
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/449 (30%), Positives = 212/449 (47%), Gaps = 55/449 (12%)
Query: 14 PPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLS 73
P +P+ N ++R +S + C S + L Q HA + +G+ +D +L LS
Sbjct: 21 PNQPTTNNE----RSRHTISLIDRCSSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALS 76
Query: 74 SSKNLTYARSILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDM--KRRGIKP 127
S +L YAR + D +P P WN LIR YA P ++W F+DM P
Sbjct: 77 SFASLEYARKVF-----DEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYP 131
Query: 128 TEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVF 187
++T+PF++KA AE+S L+ G + KS + SDV+ N+L+ Y SC ACKVF
Sbjct: 132 NKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 191
Query: 188 DDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLS 247
+ E+ VVSWN +I V+ +A+ F KM+ + TM+ VLSAC ++ +L
Sbjct: 192 TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLE 251
Query: 248 LGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA 307
G+ V + E +N L A++DMY KCG++ A+ LF MEE + TW+ M+ G A
Sbjct: 252 FGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYA 311
Query: 308 -------------------------------QHGYAEEALELFSNMK-NSSISPNYVTFL 335
Q+G EAL +F ++ +I N +T +
Sbjct: 312 ISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLV 371
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPF 395
L AC G +E G R+ H +GIK + + ++ G L++A + N
Sbjct: 372 STLSACAQVGALELG-RWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKARE-VFNSVE 429
Query: 396 QPNPIVLRALLSASSIHDAKYQDGVGNEV 424
+ + V A++ ++H G G+E
Sbjct: 430 KRDVFVWSAMIGGLAMH------GCGSEA 452
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 159/468 (33%), Positives = 234/468 (50%), Gaps = 9/468 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+IH+++ + G LV + L AR+I N + + + W+ +I YA
Sbjct: 6 RIHSRLSLCGFHRATIAQNGLVSM--YAKCGCLDEARAIF-NGILERTVVSWSAMIGAYA 62
Query: 106 WSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG--LDS 162
R +EA+ +F M+ G ++P T+ V AC I L +G ++ A SG S
Sbjct: 63 LHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSS 122
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
+ N L+ Y C +A KVFD M SW +IT C EN L EA+ F +M
Sbjct: 123 NAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMN 182
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
G P T+ VL+AC G L +GK +H +L G + TAL+DMYAKCG++
Sbjct: 183 LEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLE 242
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
C+ +F+ ME N +W+AMI LAQHG +EALELF M + + TF+ VL AC+
Sbjct: 243 CSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACS 302
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVL 402
HAG++++ +FH M + I P HY D + RAG L++A I +MPF P +
Sbjct: 303 HAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTW 362
Query: 403 RALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFM 462
+ LL+A IH Q +V L +L P S ++ N YA G + VR+ M
Sbjct: 363 KTLLNACRIHS---QAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGM 419
Query: 463 KNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+ GLKK+ G S++E+ +H F +G + I LE L M+
Sbjct: 420 TDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMR 467
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 138/294 (46%), Gaps = 11/294 (3%)
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
+ EG ++ + ++ G N LV Y C +A +F+ + ER+VVSW+ +I
Sbjct: 1 MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGA 60
Query: 205 CVENLWLGEAVGYFVKMKDLG-FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
+ EA+ F +M++ G EP+ T V +AC + +L G+ +H + G +
Sbjct: 61 YALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELK 120
Query: 264 --NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSN 321
N L AL++MY +CG++ AR +F M+ + ++W++MI ++ EALELF
Sbjct: 121 SSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHR 180
Query: 322 MKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAG 381
M I P VT VL AC +G ++ G + H G + + D+ A+ G
Sbjct: 181 MNLEGIPPTSVTLASVLNACACSGALKVG-KQIHSRLDASGFHSSVLAQTALLDMYAKCG 239
Query: 382 HLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
L+ + M + N + A+++A + H G G+E E+ G
Sbjct: 240 SLECSSKVFTAMETR-NSVSWTAMIAALAQH------GQGDEALELFKEMNLEG 286
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 165/503 (32%), Positives = 246/503 (48%), Gaps = 37/503 (7%)
Query: 43 HLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIR 102
H +IH G +D I L+ +S + + AR +L + + + WN +I
Sbjct: 139 HGLEIHGLASKLGFVDDPFIQTGLI--AMYASCRRIMDAR-LLFDKMCHPDAVAWNMIID 195
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
GY + +A+ +F DM+ +KP VL AC L+ G + V +G
Sbjct: 196 GYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAI 255
Query: 163 DVYTNNNLVRFYGSC-----RRK--------------------------RDACKVFDDMC 191
D + L+ Y +C RK +DA +FD M
Sbjct: 256 DSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMI 315
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
ER +V W+ +I+ E+ EA+ F +M PD+ TML V+SAC+ +G L+ W
Sbjct: 316 ERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANW 375
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+H + G + ALIDMYAKCG + AR +F M NV +WS+MI A HG
Sbjct: 376 IHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGN 435
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
A+ A++LF MK +I PN VTF+GVL AC HAG+VE+G + F M + HGI P R HY
Sbjct: 436 ADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYG 495
Query: 372 TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLEL 431
M D+ RA L++A I MPF PN I+ +L+SA +H + +G +RLLEL
Sbjct: 496 CMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHG---EAELGEFAAKRLLEL 552
Query: 432 EPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDS 491
EP LV+++N YA+ W V +R+ M G+ K K S +E+ +H F
Sbjct: 553 EPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRY 612
Query: 492 QVELAGIYQILETLNLHMKVLNF 514
+ IY+ L+ + +K++ +
Sbjct: 613 HKQSDEIYEKLDEVVSKLKLVGY 635
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 198/431 (45%), Gaps = 44/431 (10%)
Query: 43 HLYQIHAQIQVSGL--QNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW--- 97
HL QIHAQI S +N +L +L + + + + V +P P
Sbjct: 31 HLKQIHAQILHSNTTPENTNTLLSKLA---LSICTLSSSSSSLHYALSVFSQIPNPHTHF 87
Query: 98 -NNLIRGYAWSDRPREAVWVFIDMKR-RGIKPTEFTYPFVLKACAEISGLNEGMQVQANV 155
N L+R + S P + ++++ +++ F++P +LKA +++S N G+++
Sbjct: 88 SNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLA 147
Query: 156 TKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
+K G D + L+ Y SCRR DA +FD MC V+WN+II +N +A+
Sbjct: 148 SKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDAL 207
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY 275
F M+ +PD + VLSAC GNLS G+ +H + + G ++ L TALI+MY
Sbjct: 208 RLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMY 267
Query: 276 AKCGA-------------------------------VGCARLLFSRMEEINVWTWSAMIL 304
A CGA V AR +F +M E ++ WSAMI
Sbjct: 268 ANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMIS 327
Query: 305 GLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIK 364
G A+ +EAL+LF M P+ +T L V+ AC+H G + + H G
Sbjct: 328 GYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQA-NWIHTYVDRSGFG 386
Query: 365 PMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEV 424
+ + D+ A+ G+L +A NMP + N I ++++A ++H +
Sbjct: 387 RALSVNNALIDMYAKCGNLVKAREVFENMP-RKNVISWSSMINAFAMH-GNADSAIKLFR 444
Query: 425 RRRLLELEPRG 435
R + + +EP G
Sbjct: 445 RMKEVNIEPNG 455
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 12/213 (5%)
Query: 32 LSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
LS + C L Q IH + SG + L+ + NL AR + N
Sbjct: 358 LSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDM--YAKCGNLVKAREVFENM 415
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
+V I W+++I +A A+ +F MK I+P T+ VL AC + EG
Sbjct: 416 PRKNV-ISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEG 474
Query: 149 MQV-QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVCV 206
++ + + + G+ +V Y R A ++ + M +V+ W +++ C
Sbjct: 475 EKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQ 534
Query: 207 ENLWLGEA-VGYFVKMKDLGFEPDETTMLVVLS 238
+ GEA +G F + L EPD LVVLS
Sbjct: 535 VH---GEAELGEFAAKRLLELEPDHDGALVVLS 564
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 148/392 (37%), Positives = 222/392 (56%), Gaps = 8/392 (2%)
Query: 127 PTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKV 186
P EFT+ VLKACA ++ + G ++ A VTK G +S+++ N+L+ Y A +
Sbjct: 90 PDEFTFTSVLKACAGLAHVVNGQKIHAMVTKQGFESNLFVRNSLIDMYFKAGYLLLARHL 149
Query: 187 FDDMC--ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG-FEPDETTMLVVLSACTEL 243
FD+M +R+VV WN +I +N +A+ F M+ G P++ T++ VL AC L
Sbjct: 150 FDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACAHL 209
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
G L LGKW+ + R L LG AL DMYAKCG + AR +F++MEE +V +WS +I
Sbjct: 210 GALDLGKWIDGFISRREMALGLFLGNALADMYAKCGCITEARRVFNKMEERDVISWSIII 269
Query: 304 LGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
GLA +G+A+EA F M + PN V F+G+L AC HAG+V+ G F+ M+ +G+
Sbjct: 270 CGLAMYGHADEAFGCFYEMLDCGEKPNDVVFMGLLTACTHAGLVKKGLNCFNTMDKEYGV 329
Query: 364 KPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD-GVGN 422
P HY + D+L+RAG L +A I +MP +PN I+ ALL I Y+D G G
Sbjct: 330 SPKVEHYGCVVDLLSRAGELDKAEDMISSMPMKPNVIIWGALLGGCRI----YRDSGRGQ 385
Query: 423 EVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSI 482
V + +LEL+ S + V +AN Y+ +G + + R M+ G+ K G SW+E+ ++
Sbjct: 386 RVVQHILELDSDHSGSYVYLANVYSSMGRLDDAAKCRLRMRENGVLKTPGCSWIEVDNTV 445
Query: 483 HRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
H F+ G S E IY ++ L MK+ +
Sbjct: 446 HEFFMGDLSHPESNKIYSMIRELMWKMKLAGY 477
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 133/280 (47%), Gaps = 9/280 (3%)
Query: 33 SFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN-Y 88
S LK C H+ +IHA + G +++ + L+ + L AR + +
Sbjct: 97 SVLKACAGLAHVVNGQKIHAMVTKQGFESNLFVRNSLIDM--YFKAGYLLLARHLFDEMF 154
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKR-RGIKPTEFTYPFVLKACAEISGLNE 147
V D + WN +I GYA +++ +A+ VF M++ G+ P + T VL ACA + L+
Sbjct: 155 VRDRNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACAHLGALDL 214
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G + +++ + ++ N L Y C +A +VF+ M ER V+SW++II
Sbjct: 215 GKWIDGFISRREMALGLFLGNALADMYAKCGCITEARRVFNKMEERDVISWSIIICGLAM 274
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG-KWVHLQLIERGTVLNCQ 266
EA G F +M D G +P++ + +L+ACT G + G + E G +
Sbjct: 275 YGHADEAFGCFYEMLDCGEKPNDVVFMGLLTACTHAGLVKKGLNCFNTMDKEYGVSPKVE 334
Query: 267 LGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILG 305
++D+ ++ G + A + S M + NV W A++ G
Sbjct: 335 HYGCVVDLLSRAGELDKAEDMISSMPMKPNVIIWGALLGG 374
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 5/167 (2%)
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+ LI A V A L+F+ + N++ +A + LAQ+ + A++ F++ +S
Sbjct: 26 IAVKLIGACADHANVRQAALIFAHLASPNIFAHNATLKALAQNSHWFHAIQFFNHQVSSP 85
Query: 327 ISPN--YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+PN TF VL AC V +G + H M G + +++ D+ +AG+L
Sbjct: 86 NAPNPDEFTFTSVLKACAGLAHVVNGQK-IHAMVTKQGFESNLFVRNSLIDMYFKAGYLL 144
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLEL 431
A M + +V + A + KY D + EV R + +
Sbjct: 145 LARHLFDEMFVRDRNVVCWNAMIAGYAQNEKYSDAI--EVFRMMQQF 189
>gi|297741128|emb|CBI31859.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 143/396 (36%), Positives = 218/396 (55%), Gaps = 13/396 (3%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN LI GY+ ++ +E + +F M IK T ++ AC+ + +
Sbjct: 91 VSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKY 150
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ ++ L+ DVY N L+ YG A K+FD+M +R V+SW +IT + +A
Sbjct: 151 IKENNLEIDVYLGNTLIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDA 210
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
V F +M +PD+ T+ VLSAC LG L +G VH + G + +G +LIDM
Sbjct: 211 VKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDM 270
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y KCG V A +F RM++ + +W+++I GLA +G+A AL+LFS M + P + TF
Sbjct: 271 YCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTF 330
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+G+L AC HAG+V G YF ME VHG+ P HY + D+L+R+G++ +AY FI MP
Sbjct: 331 VGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMP 390
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEV-----RRRLLELEPRGSQNLVIVANKYAEV 449
P+ +V R LLSA +H GN V +RLLEL+P S N V+++N YA V
Sbjct: 391 IVPDVVVWRILLSACKLH--------GNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGV 442
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRF 485
W+ +R M++ ++K G S +E+ G + +
Sbjct: 443 DRWDDAMKMRELMEDSDVQKPSGSSSIEVDGMVSNY 478
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 138/283 (48%), Gaps = 4/283 (1%)
Query: 104 YAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD 163
Y+ DR +++ ++FI + + T V+ I+ + + K G +S
Sbjct: 2 YSPCDRRQKSHFLFIIV---ALSSTIAPAALVVALTTNINASTISSSIHVHALKLGFESY 58
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
++ +N L+ Y C + A K+FD M +R +VSWN +I + E + F M
Sbjct: 59 LFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTA 118
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
+ D TM+ ++ AC+ LG+ + + E ++ LG LIDMY + G +
Sbjct: 119 ANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRLGNLTA 178
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
AR LF M + +V +W++MI G +Q +A++LF M + + P+ VT VL AC H
Sbjct: 179 ARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAH 238
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
G ++ G+ H + HG++ +++ D+ + G +++A
Sbjct: 239 LGKLDVGWAVHHYIRR-HGVQADIYVGNSLIDMYCKCGMVEKA 280
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 119/269 (44%), Gaps = 47/269 (17%)
Query: 235 VVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI 294
+V++ T + ++ +H+ ++ G + ALI MYA CG +G A+ +F M +
Sbjct: 29 LVVALTTNINASTISSSIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDR 88
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG---MVEDGY 351
++ +W+ +I G +Q+ +E L LF M ++I + VT + ++ AC+H G +
Sbjct: 89 DLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMV 148
Query: 352 RYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP----------------- 394
+Y E + ++ +T+ D+ R G+L A NMP
Sbjct: 149 KYIKE----NNLEIDVYLGNTLIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQA 204
Query: 395 ---------FQ--------PNPIVLRALLSASSIHDAKYQDG--VGNEVRRRLLELEPRG 435
FQ P+ + + ++LSA + H K G V + +RR ++ +
Sbjct: 205 SQFSDAVKLFQEMMAAKVKPDKVTVASVLSACA-HLGKLDVGWAVHHYIRRHGVQADIYV 263
Query: 436 SQNLVIVANKYAEVGMWEKVSNVRRFMKN 464
+L+ + Y + GM EK V MK+
Sbjct: 264 GNSLI---DMYCKCGMVEKALEVFHRMKD 289
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
Query: 45 YQIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
+ +H I+ G+Q D + L+ C + + R + D + W ++I
Sbjct: 246 WAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHR------MKDKDSVSWTSVI 299
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
G A + A+ +F M R G++PT T+ +L ACA +N+G++
Sbjct: 300 SGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLE 348
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 151/423 (35%), Positives = 227/423 (53%), Gaps = 16/423 (3%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN ++ G+A R EA+ VF M G+ P +T VL + + + G V
Sbjct: 199 VLWNAMVNGFAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGF 258
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV---CVENLWL 211
VTK G +S V +N L+ YG C+ DA VF+ M E + SWN I++V C ++
Sbjct: 259 VTKMGYESGVVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHY-- 316
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-------- 263
G + M +PD T+ VL ACT L L G+ +H ++ G
Sbjct: 317 GTLRLFDRMMGSSRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFD 376
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
+ L AL+DMYAKCG + AR++F M E +V +W+ MI G HGY EAL++FS M
Sbjct: 377 DVLLNNALMDMYAKCGNMRDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMC 436
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+ + PN ++F+G+L AC+HAGMV++G + EME +G+ P HY + D+L RAG L
Sbjct: 437 QAQMVPNEISFVGLLSACSHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQL 496
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
EAY ++ MPF+ +P+ R+LL+A +H+ + +++ELEP N V+++
Sbjct: 497 MEAYDLVLTMPFKADPVGWRSLLAACRLHN---DTDLAEVAASKVIELEPDHCGNYVLMS 553
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N Y VG +E+V R MK +KK G SW+EL +H F +G + + IY L
Sbjct: 554 NVYGVVGRYEEVLEWRYTMKQQNVKKRPGCSWIELVNGVHVFITGDRTHPQTEYIYAGLN 613
Query: 504 TLN 506
+L
Sbjct: 614 SLT 616
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 154/306 (50%), Gaps = 10/306 (3%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
+N LI G+ + P+ A+ ++ M+ GI P +FT+P V++AC + ++ +
Sbjct: 100 YNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFVVTKIHGLMF 159
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
K GL+ DV+ + LV Y R +A +VF+++ R VV WN ++ + EA+G
Sbjct: 160 KVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGFAQIGRFEEALG 219
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F +M G P T+ VLS + +G+ G+ VH + + G + ALIDMY
Sbjct: 220 VFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVSNALIDMYG 279
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS-ISPNYVTFL 335
KC VG A +F M+EI++++W++++ + G L LF M SS + P+ VT
Sbjct: 280 KCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQPDLVTVT 339
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIH--------YHTMADILARAGHLKEAY 387
VL AC H + G R H V+G+ H + + D+ A+ G++++A
Sbjct: 340 TVLPACTHLAALMHG-REIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGNMRDAR 398
Query: 388 TFIMNM 393
+NM
Sbjct: 399 MVFVNM 404
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 107/217 (49%), Gaps = 2/217 (0%)
Query: 136 LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD--DMCER 193
L++CA + L++G ++ ++ K+ +L+ Y C + +VF+ +
Sbjct: 36 LQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNFPTHHNK 95
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
+V ++N +I + N A+ + +M+ LG PD+ T V+ AC + + + +H
Sbjct: 96 NVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFVVTKIH 155
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
+ + G L+ +G+AL++ Y K VG A +F + +V W+AM+ G AQ G E
Sbjct: 156 GLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGFAQIGRFE 215
Query: 314 EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
EAL +F M + + P T GVL + G ++G
Sbjct: 216 EALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNG 252
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 5/125 (4%)
Query: 229 DETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLF 288
D T + L +C NLS GK +H L++ + T+LI+MY+KC + + +F
Sbjct: 28 DLGTCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVF 87
Query: 289 S--RMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
+ NV+ ++A+I G + + AL L++ M++ I+P+ TF V+ AC G
Sbjct: 88 NFPTHHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRAC---GD 144
Query: 347 VEDGY 351
+DG+
Sbjct: 145 DDDGF 149
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 150/441 (34%), Positives = 223/441 (50%), Gaps = 60/441 (13%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN +I Y ++PR A+ V+ +++ + F P VLKAC ++S G ++ V
Sbjct: 127 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 186
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER----------------------- 193
K GLD DV+ N L+ YG C A VFD M ER
Sbjct: 187 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHLG 246
Query: 194 ------------SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
+VVSW +I C+ + L E F++M++ P+E TML
Sbjct: 247 LARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITML------- 299
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
+ + +E ++C L TAL+DMYAKCG + A LF ++ W+A
Sbjct: 300 -----------NKERVE----VDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNA 344
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
+I G A HGY EEAL++F+ M+ + PN +TF+G+L AC+HAG+V +G + F +M H
Sbjct: 345 IITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTF 404
Query: 362 GIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVG 421
G+ P HY M D+L RAG L EA+ I +MP +PN IV AL++A +H +G
Sbjct: 405 GLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHK---NPQLG 461
Query: 422 NEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGS 481
+LLE+EP V+++N YA W + VR+ MK VG+KK G S +E+ G+
Sbjct: 462 ELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGT 521
Query: 482 IHRFYSGYDSQVELAGIYQIL 502
+H F G S ++ I ++L
Sbjct: 522 VHEFLMGDQSHPQIRRINEML 542
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 97/235 (41%), Gaps = 25/235 (10%)
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
+L AR + +V + W +I G S+R E +FI M+ I P E T
Sbjct: 244 HLGLARQLFNGLTQKTV-VSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITM---- 298
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
+ K ++ D N LV Y C A ++F + R +
Sbjct: 299 ------------------LNKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDIC 340
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
WN IIT + + EA+ F +M+ G +P++ T + +L AC+ G ++ GK + ++
Sbjct: 341 MWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKM 400
Query: 257 IER-GTVLNCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQH 309
+ G V + ++D+ + G + A + M + N W A++ H
Sbjct: 401 VHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLH 455
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 173/543 (31%), Positives = 275/543 (50%), Gaps = 77/543 (14%)
Query: 42 KHLYQIHAQIQVSG-LQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNL 100
K L ++H++I ++ L+ D + +L+R S+ + AR I + +V + +N +
Sbjct: 52 KTLNKLHSKIVINEHLRIDPTLAIKLMR--AYSAQGETSVARYIFDRSLEKNV-VFFNVM 108
Query: 101 IRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGL 160
IR Y ++ EA+ +F M P +T+P VLKAC+ + L G+QV + K GL
Sbjct: 109 IRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGL 168
Query: 161 DS-------------------------------DVYTNNNLVRFYGSCRRKRDA---CK- 185
D+ DV + N++V Y + DA CK
Sbjct: 169 DTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKE 228
Query: 186 ---------------------------------VFDDMCERSVVSWNVIITVCVENLWLG 212
+F+ M +++++SWNV+I + V N
Sbjct: 229 MDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPN 288
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQLGTAL 271
EAV F++M++ G +PD T+ +L AC +L L LG+ +H + IE+G + N L AL
Sbjct: 289 EAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLH-KYIEKGNLQPNLLLENAL 347
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
+DMYAKCG + AR +F +M +V +W++M+ + G +A+ LF+ M +S +P+
Sbjct: 348 LDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDS 407
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
+ F+ VL AC+H G+++ G YF M +GI P H+ M D+ RAG ++EAY+FI
Sbjct: 408 IAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIK 467
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGM 451
MP +PN V ALLSA +H + +G L +L P+ S V+++N YA+ GM
Sbjct: 468 QMPMEPNERVWGALLSACRVHS---KMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGM 524
Query: 452 WEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
W+ V NVR MK +G+KK+ G+S VEL G +H F +G + IY L+ L MK
Sbjct: 525 WKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKE 584
Query: 512 LNF 514
L +
Sbjct: 585 LGY 587
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 152/482 (31%), Positives = 249/482 (51%), Gaps = 67/482 (13%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANV 155
+N +I+G+ + P A+ ++ M + + PT +T+ ++KAC + + G V ++
Sbjct: 105 YNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHI 164
Query: 156 TKSGLDSDVYTNNNLVRFYGS--------------CRRK-----------------RDAC 184
K G +S ++ LV FY C R A
Sbjct: 165 WKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMLSALARVGDMDSAR 224
Query: 185 KVFDDMCERS-------------------------------VVSWNVIITVCVENLWLGE 213
K+F++M ER+ ++SW +IT +N +
Sbjct: 225 KLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQD 284
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
A+ + +M+ G PDE TM V SAC +G L LGK +H ++ +G L+ +G+AL+D
Sbjct: 285 ALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVD 344
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MYAKCG++ + L+F ++ + N++ W+A+I GLA HGYAE+AL +F+ M+ I PN VT
Sbjct: 345 MYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVT 404
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
F+ +L AC HAG+V++G F M + I+P HY M D+L+++G+L EA I +M
Sbjct: 405 FISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSM 464
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
F+PN I+ ALL+ +H + + +L+ LEP S + ++ + YAE W
Sbjct: 465 EFEPNSIIWGALLNGCKLHG---NCEIAEDAVEQLMILEPMNSGHYNLLVSMYAEEKDWM 521
Query: 454 KVSNVRRFMKNVGL-KKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVL 512
+V+++R MK G+ KK G SW+EL G+IH+F + DS + IY IL L+ +K+
Sbjct: 522 EVAHIRSMMKEKGVEKKYPGSSWIELEGTIHQFSASADSHPDSDKIYFILTELDGQLKLA 581
Query: 513 NF 514
+
Sbjct: 582 GY 583
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 5/228 (2%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I W +I Y+ + + ++A+ ++ +M+ GI P E T V ACA I L G ++
Sbjct: 267 ISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHY 326
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V GL+ DVY + LV Y C + +F + ++++ WN +I + + +A
Sbjct: 327 VMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKA 386
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQLGTALID 273
+ F M+ P+ T + +LSACT G + G+ L + + + + ++D
Sbjct: 387 LRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVD 446
Query: 274 MYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHG---YAEEALE 317
M +K G + A L ME E N W A++ G HG AE+A+E
Sbjct: 447 MLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVE 494
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 5/216 (2%)
Query: 143 SGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII 202
S +NE + A++ K+ D + + + + F M +V +N +I
Sbjct: 50 STINELHGLCASMIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQMENPNVFVYNAMI 109
Query: 203 TVCVENLWLGEAVGYFVKM-KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGT 261
V + A+ +V M ++ P T ++ ACT + + LG+ VH + ++G
Sbjct: 110 KGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGF 169
Query: 262 VLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSN 321
+ + TAL+D Y+K + AR +F M E + + W+AM+ LA+ G + A +LF
Sbjct: 170 ESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMLSALARVGDMDSARKLFEE 229
Query: 322 MKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM 357
M N T+ ++ G VE F++M
Sbjct: 230 MPER----NTATWNTMIDGYTRLGNVESAELLFNQM 261
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 168/466 (36%), Positives = 243/466 (52%), Gaps = 19/466 (4%)
Query: 43 HLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPWN 98
H Q+H+ I G DA I + ++ A + D +P + WN
Sbjct: 28 HGQQLHSLIHKHGF--DANIFVGTALVDMYAKCADMHSAVRVF-----DQMPERNLVSWN 80
Query: 99 NLIRGYAWSDRPREAVWVFID-MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
++I G+ ++ AV VF D ++ + + P E + VL ACA + GLN G QV V K
Sbjct: 81 SMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVK 140
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
GL Y N+L+ Y CR + K+F + +R VV+WNV++ V+N EA Y
Sbjct: 141 FGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNY 200
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN-CQLGTALIDMYA 276
F M+ G PDE + VL + L L G +H Q+I+ G V N C LG+ LI MYA
Sbjct: 201 FWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGS-LITMYA 259
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KCG++ A +F +E+ NV +W+AMI HG A + +ELF +M + I P++VTF+
Sbjct: 260 KCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVC 319
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
VL AC+H G VE+G +F+ M+ +H + P HY M D+L RAG L EA FI +MP +
Sbjct: 320 VLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMK 379
Query: 397 PNPIVLRALLSASSIHDAKYQD-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKV 455
P P V ALL A KY + +G E RL E+EP N V++AN G E+
Sbjct: 380 PTPSVWGALLGACR----KYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEA 435
Query: 456 SNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQI 501
+ VRR M G++K G SW+++ F + S IY++
Sbjct: 436 NEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKM 481
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 144/299 (48%), Gaps = 3/299 (1%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M+ G P +FT+ +L A A + G Q+ + + K G D++++ LV Y C
Sbjct: 1 MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK-MKDLGFEPDETTMLVVLS 238
A +VFD M ER++VSWN +I N AVG F +++ P+E ++ VLS
Sbjct: 61 MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 120
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
AC +G L+ G+ VH +++ G V + +L+DMY KC LF + + +V T
Sbjct: 121 ACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVT 180
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
W+ +++G Q+ EEA F M+ I P+ +F VL + + G ++
Sbjct: 181 WNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQII 240
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQ 417
+ +K M I ++ + A+ G L +AY + N I A++SA +H Q
Sbjct: 241 KLGYVKNMCI-LGSLITMYAKCGSLVDAYQVFEGIE-DHNVISWTAMISAYQLHGCANQ 297
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 173/543 (31%), Positives = 275/543 (50%), Gaps = 77/543 (14%)
Query: 42 KHLYQIHAQIQVSG-LQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNL 100
K L ++H++I ++ L+ D + +L+R S+ + AR I + +V + +N +
Sbjct: 52 KTLNKLHSKIVINEHLRIDPTLAIKLMR--AYSAQGETSVARYIFDRSLEKNV-VFFNVM 108
Query: 101 IRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGL 160
IR Y ++ EA+ +F M P +T+P VLKAC+ + L G+QV + K GL
Sbjct: 109 IRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGL 168
Query: 161 DS-------------------------------DVYTNNNLVRFYGSCRRKRDA---CK- 185
D+ DV + N++V Y + DA CK
Sbjct: 169 DTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKE 228
Query: 186 ---------------------------------VFDDMCERSVVSWNVIITVCVENLWLG 212
+F+ M +++++SWNV+I + V N
Sbjct: 229 MDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPN 288
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQLGTAL 271
EAV F++M++ G +PD T+ +L AC +L L LG+ +H + IE+G + N L AL
Sbjct: 289 EAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLH-KYIEKGNLRPNLLLENAL 347
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
+DMYAKCG + AR +F +M +V +W++M+ + G +A+ LF+ M +S +P+
Sbjct: 348 LDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDS 407
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
+ F+ VL AC+H G+++ G YF M +GI P H+ M D+ RAG ++EAY+FI
Sbjct: 408 IAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIK 467
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGM 451
MP +PN V ALLSA +H + +G L +L P+ S V+++N YA+ GM
Sbjct: 468 QMPMEPNERVWGALLSACRVHS---KMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGM 524
Query: 452 WEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
W+ V NVR MK +G+KK+ G+S VEL G +H F +G + IY L+ L MK
Sbjct: 525 WKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKE 584
Query: 512 LNF 514
L +
Sbjct: 585 LGY 587
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/423 (33%), Positives = 231/423 (54%), Gaps = 6/423 (1%)
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
+++ + W ++I GY A+ +F +MK RG+ P + +L ACA L G
Sbjct: 414 MDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSG 473
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
V + ++ L+++ + +N L Y C +DA VF M ++ V+SWN +I +N
Sbjct: 474 KIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKN 533
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
EA+ F +M+ +PD TT+ +L AC L L G+ +H + G + +
Sbjct: 534 SLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVT 592
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
A++DMY KCG + AR LF + ++ +W+ MI G HGY EA+ F+ M+ + I
Sbjct: 593 NAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIE 652
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
P+ V+F+ +L AC+H+G++++G++ F+ M+ I+P HY M D+LAR G+L +A+
Sbjct: 653 PDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHK 712
Query: 389 FIMNMPFQPNPIVLRALLSASSI-HDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYA 447
FI MP +P+ + ALL I HD K + +V R+ ELEP + V++AN YA
Sbjct: 713 FIKAMPIKPDATIWGALLCGCRIHHDVK----LAEKVAERIFELEPENTGYYVLLANIYA 768
Query: 448 EVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNL 507
E WE+V +R+ + GLKK G SW+E+ G I+ F +G S+ + I +L+ L
Sbjct: 769 EAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRS 828
Query: 508 HMK 510
MK
Sbjct: 829 KMK 831
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 192/365 (52%), Gaps = 8/365 (2%)
Query: 33 SFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S L+LC +K + ++ + I+ SG+ D + +LV F + +L R + + +
Sbjct: 155 SILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLV-FMYVKCG-DLKEGRMVF-DKL 211
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
++S WN +I Y+ S E++ +F M GIKP +T+ +LK A ++ + EG
Sbjct: 212 SESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGR 271
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
QV + K G +S N+L+ FY R+ R A K+FD++ +R V+SWN +I+ V+N
Sbjct: 272 QVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNG 331
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNCQLG 268
+ F+KM G + D TM+ V AC +G L LGK +H I+ T+ +
Sbjct: 332 LDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFN 391
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
L+DMY+KCG + A +F RM+E V +W++MI G + G ++ A++LF MK+ +
Sbjct: 392 NTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVV 451
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
P+ +L AC G ++ G + H+ + ++ + + D+ A+ G +K+A+
Sbjct: 452 PDVYAVTSILNACAINGNLKSG-KIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHD 510
Query: 389 FIMNM 393
+M
Sbjct: 511 VFSHM 515
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 165/350 (47%), Gaps = 6/350 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+H I G + ++ L+ F + + + A+ + + + D I WN++I GY
Sbjct: 272 QVHGLICKLGFNSYNTVVNSLISFYFVG--RKVRCAQKLF-DELTDRDVISWNSMISGYV 328
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA-NVTKSGLDSDV 164
+ + +FI M G+ T V ACA I L G + + ++ + LD +V
Sbjct: 329 KNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREV 388
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL 224
NN L+ Y C A +VF+ M E++VVSW +IT V A+ F +MK
Sbjct: 389 RFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSR 448
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCA 284
G PD + +L+AC GNL GK VH + E N + AL DMYAKCG++ A
Sbjct: 449 GVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDA 508
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA 344
+FS M++ +V +W+ MI G ++ EAL LF+ M+ S P+ T +L AC
Sbjct: 509 HDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASL 567
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
++ G R H +G + + + D+ + G L A + +P
Sbjct: 568 AALDKG-REIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIP 616
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 144/315 (45%), Gaps = 27/315 (8%)
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
Y +L+ CAE + +G +V++ + SG+ D LV Y C ++ VFD +
Sbjct: 152 AYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKL 211
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
E + WN++I+ + GE++ F +M +LG +P+ T +L + + G+
Sbjct: 212 SESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGR 271
Query: 251 WVHLQLIERG-----TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
VH + + G TV+N +LI Y V CA+ LF + + +V +W++MI G
Sbjct: 272 QVHGLICKLGFNSYNTVVN-----SLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISG 326
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKP 365
++G + +E+F M + + T + V AC + G + G ++ H + IK
Sbjct: 327 YVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLG-----KVLHSYSIKA 381
Query: 366 MRIHY-----HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGV 420
+ +T+ D+ ++ G L A M + ++S +S+ ++G+
Sbjct: 382 ATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMD-------EKTVVSWTSMITGYVREGL 434
Query: 421 GNEVRRRLLELEPRG 435
+ + E++ RG
Sbjct: 435 SDGAIKLFDEMKSRG 449
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/466 (33%), Positives = 242/466 (51%), Gaps = 14/466 (3%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPWNNLI 101
QIH + GL D + L+ + S N C V +P + WN+ I
Sbjct: 578 QIHGEGFKWGLDLDVSVSNALLTLYAETDSINE-------CQKVFFQMPEYDQVSWNSFI 630
Query: 102 RGYA-WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGL 160
A + +A+ F++M + G +P T+ +L A + S L G Q+ A + K +
Sbjct: 631 GALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSV 690
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER-SVVSWNVIITVCVENLWLGEAVGYFV 219
D N L+ FYG C + D +F M ER VSWN +I+ + + L +A+
Sbjct: 691 ADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVW 750
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
M G + D T VLSAC + L G VH + + +G+AL+DMYAKCG
Sbjct: 751 PMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCG 810
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
+ A F M N+++W++MI G A+HG+ ++AL++F+ MK SP++VTF+GVL
Sbjct: 811 KIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLS 870
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
AC+H G+V++GY++F M V+G+ P H+ M D+L RAG +K+ FI MP PN
Sbjct: 871 ACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNI 930
Query: 400 IVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVR 459
++ R +L A + + + +G + L+ELEP+ + N V+++N +A G WE V R
Sbjct: 931 LIWRTVLGACCRANGRNTE-LGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEAR 989
Query: 460 RFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
M+ +KK G SWV + +H F +G + E IY+ L+ L
Sbjct: 990 LAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKEL 1035
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 156/324 (48%), Gaps = 18/324 (5%)
Query: 39 CSKKHLYQIHAQIQVSGLQNDAQILKELV----RFCTLSSSKNLTYARSILCNYVNDSVP 94
C L Q+ +I+ SG D + LV R+ + +K ++ + D
Sbjct: 365 CGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAK-------MIFKQMYDRNA 417
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG----MQ 150
+ N L+ G A + EA VF +MK ++ + +L E S L EG +
Sbjct: 418 VTMNGLMVGLARQHQGEEAAKVFKEMKDL-VEINSESLVVLLSTFTEFSNLKEGKRKGQE 476
Query: 151 VQANVTKSGL-DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
V A + +SGL D+ + N LV YG C +AC VF M + VSWN +I+ N
Sbjct: 477 VHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNE 536
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
EAV F MK G P +++ LS+C+ LG L+LG+ +H + + G L+ +
Sbjct: 537 RFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSN 596
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH-GYAEEALELFSNMKNSSIS 328
AL+ +YA+ ++ + +F +M E + +W++ I LA++ +AL+ F M +
Sbjct: 597 ALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWR 656
Query: 329 PNYVTFLGVLCACNHAGMVEDGYR 352
PN VTF+ +L A + ++ G++
Sbjct: 657 PNRVTFINILAAVSSFSVLGLGHQ 680
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 150/295 (50%), Gaps = 26/295 (8%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPWNNLI 101
+H Q+ +G +D L+ NL AR + D +P + W+ LI
Sbjct: 161 HLHLQLYKTGFTDDVFFCNTLINIYV--RIGNLVSARKLF-----DEMPQKNLVSWSCLI 213
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI--SGLNEGMQVQANVTKSG 159
GY + P EA +F + G+ P F L+AC + +G+ GMQ+ A + K
Sbjct: 214 SGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLP 273
Query: 160 LDSDVYTNNNLVRFYGSCRRK-RDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
SD+ +N L+ Y C DA +VFD++ R+ V+WN II+V G+AV F
Sbjct: 274 CVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRR---GDAVSAF 330
Query: 219 -----VKMK--DLGFEPDETTMLVVLSACTELGN--LSLGKWVHLQLIERGTVLNCQLGT 269
++M+ +L P+E T+ +++A L + L L + + ++ + G + + +G+
Sbjct: 331 KLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGS 390
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
AL++ +A+ G + CA+++F +M + N T + +++GLA+ EEA ++F MK+
Sbjct: 391 ALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKD 445
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 140/316 (44%), Gaps = 16/316 (5%)
Query: 143 SGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII 202
S L + + + K+G DV+ N L+ Y A K+FD+M ++++VSW+ +I
Sbjct: 154 SSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLI 213
Query: 203 TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGN--LSLGKWVHLQLIERG 260
+ +N EA F + G P+ + L AC + G+ + LG +H + +
Sbjct: 214 SGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLP 273
Query: 261 TVLNCQLGTALIDMYAKC-GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELF 319
V + L L+ MY+ C G++ A +F ++ N TW+++I + G A A +LF
Sbjct: 274 CVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLF 333
Query: 320 SNMKNSSIS----PNYVTFLGVLCACNHAGMVEDGYRYFHEM-EHVHGIKPMRIHY--HT 372
S M+ + PN T ++ A + + G +M + +R Y
Sbjct: 334 SVMQMEGVELNLRPNEYTLCSLVTAA--CSLADCGLVLLEQMLTRIEKSGFLRDLYVGSA 391
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELE 432
+ + AR G L + I + N + + L+ + ++Q +V + + +L
Sbjct: 392 LVNGFARYG-LMDCAKMIFKQMYDRNAVTMNGLMVGLA---RQHQGEEAAKVFKEMKDLV 447
Query: 433 PRGSQNLVIVANKYAE 448
S++LV++ + + E
Sbjct: 448 EINSESLVVLLSTFTE 463
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 161/467 (34%), Positives = 244/467 (52%), Gaps = 25/467 (5%)
Query: 52 QVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN------DSVPIP----WNNLI 101
Q+ GL +++ + C+L YAR C ++N D + P WN +I
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCD----MYAR---CGFLNSARRVFDQIERPDTASWNVII 343
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
G A + EAV VF M+ G P + +L A + L++GMQ+ + + K G
Sbjct: 344 AGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFL 403
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS-VVSWNVIITVCVENLWLGEAVGYFVK 220
+D+ N+L+ Y C +F+D + VSWN I+T C+++ E + F
Sbjct: 404 ADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKL 463
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
M EPD TM +L C E+ +L LG VH ++ G + LIDMYAKCG+
Sbjct: 464 MLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGS 523
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
+G AR +F M+ +V +WS +I+G AQ G+ EEAL LF MK++ I PN+VTF+GVL A
Sbjct: 524 LGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTA 583
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPI 400
C+H G+VE+G + + M+ HGI P + H + D+LARAG L EA FI M +P+ +
Sbjct: 584 CSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVV 643
Query: 401 VLRALLSASSIHDAKYQDGV--GNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
V + LLSA K Q V + +L+++P S V++ + +A G WE + +
Sbjct: 644 VWKTLLSA-----CKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALL 698
Query: 459 RRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
R MK +KK+ G SW+E+ IH F++ E IY +L +
Sbjct: 699 RSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNI 745
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 162/324 (50%), Gaps = 7/324 (2%)
Query: 21 NSDLLSKARQCLSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKN 77
NS + R +S + C S + L Q IH I S + D + ++ +
Sbjct: 60 NSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSM--YGKCGS 117
Query: 78 LTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLK 137
L AR + +++ + + + ++I GY+ + + EA+ +++ M + + P +F + ++K
Sbjct: 118 LRDAREVF-DFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIK 176
Query: 138 ACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS 197
ACA S + G Q+ A V K S + N L+ Y + DA +VF + + ++S
Sbjct: 177 ACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLIS 236
Query: 198 WNVIITVCVENLWLGEAVGYFVKMKDLG-FEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
W+ II + + EA+ + +M G F P+E L AC+ L G +H
Sbjct: 237 WSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLC 296
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
I+ N G +L DMYA+CG + AR +F ++E + +W+ +I GLA +GYA+EA+
Sbjct: 297 IKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAV 356
Query: 317 ELFSNMKNSSISPNYVTFLGVLCA 340
+FS M++S P+ ++ +LCA
Sbjct: 357 SVFSQMRSSGFIPDAISLRSLLCA 380
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 184/439 (41%), Gaps = 37/439 (8%)
Query: 33 SFLKLCCSKKHL---YQIHAQI----QVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
S +K C S + Q+HAQ+ S L ++ VRF +S + + Y
Sbjct: 173 SIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYG---- 228
Query: 86 CNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGI-KPTEFTYPFVLKACA 140
+P I W+++I G++ EA+ +M G+ P E+ + LKAC+
Sbjct: 229 -------IPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
+ + G Q+ KS L + +L Y C A +VFD + SWNV
Sbjct: 282 SLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNV 341
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
II N + EAV F +M+ GF PD ++ +L A T+ LS G +H +I+ G
Sbjct: 342 IIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWG 401
Query: 261 TVLNCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEALELF 319
+ + + +L+ MY C + C LF + +W+ ++ QH E L LF
Sbjct: 402 FLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLF 461
Query: 320 SNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILAR 379
M S P+++T +L C ++ G + H G+ P + + + D+ A+
Sbjct: 462 KLMLVSECEPDHITMGNLLRGCVEISSLKLGSQ-VHCYSLKTGLAPEQFIKNGLIDMYAK 520
Query: 380 AGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNL 439
G L +A +M R ++S S++ Q G G E E++ G
Sbjct: 521 CGSLGQARRIFDSMDN-------RDVVSWSTLIVGYAQSGFGEEALILFKEMKSAG---- 569
Query: 440 VIVANKYAEVGMWEKVSNV 458
I N VG+ S+V
Sbjct: 570 -IEPNHVTFVGVLTACSHV 587
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 151/353 (42%), Gaps = 45/353 (12%)
Query: 98 NNLIRGYAWSDRPREAVWVF-IDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
N+ I S+ REA+ F K K TY ++ AC+ L +G ++ ++
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
S D NN+++ YG C RDA +VFD M ER++VS+ +IT +N EA+
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
++KM PD+ ++ AC ++ LGK +H Q+I+ + + ALI MY
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV 214
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI-SPNYVTFL 335
+ + A +F + ++ +WS++I G +Q G+ EAL M + + PN F
Sbjct: 215 RFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFG 274
Query: 336 GVLCACN-----------------------------------HAGMVEDGYRYFHEMEHV 360
L AC+ G + R F ++E
Sbjct: 275 SSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE-- 332
Query: 361 HGIKPMRIHYHTMADILARAGHLKEAYTFIMNM---PFQPNPIVLRALLSASS 410
+P ++ + LA G+ EA + M F P+ I LR+LL A +
Sbjct: 333 ---RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQT 382
>gi|296089760|emb|CBI39579.3| unnamed protein product [Vitis vinifera]
Length = 459
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 166/456 (36%), Positives = 242/456 (53%), Gaps = 16/456 (3%)
Query: 29 RQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
R+ L L ++ L QIHA I L QIL + C + + YA +
Sbjct: 10 RRILRHLHGRKTRTQLPQIHAHILRHHLHQSNQILSHFISVC--GALDKMGYANLVFHQT 67
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
N ++ + +N++I+GY+ ++ +F MK RGI P EFT+ +LK+C+ I G
Sbjct: 68 QNPNLLL-FNSMIKGYSLCGPSENSLLLFSQMKNRGIWPDEFTFAPLLKSCSGICDNRIG 126
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD-----DMCERSVVSWNVIIT 203
V V G + ++ Y SC R DA KVFD DM +RSVVSWN +I
Sbjct: 127 KGVHGVVIVVGFERFSSIRIGIIDLYTSCGRMEDAKKVFDEMLDRDMRDRSVVSWNSMIA 186
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
++ GEA+ F +M D GFEPD+ T++ +L C LG + +G+W+H E +L
Sbjct: 187 GLEQSGRDGEALELFREMWDHGFEPDDATVVTILPVCARLGAVDVGEWIH-SYAESSRLL 245
Query: 264 N--CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSN 321
+G +L+D Y KCG + A +F+ M + NV +W+AMI GL +G E +LF
Sbjct: 246 RDFISVGNSLVDFYCKCGILETAWRVFNEMPQKNVVSWNAMISGLTFNGKGELGADLFEE 305
Query: 322 MKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAG 381
M N + PN TF+GVL C HAG+VE G F M H ++P H+ M D+LAR G
Sbjct: 306 MINKGVRPNDATFVGVLSCCAHAGLVERGRNLFTSMTVDHKMEPKLEHFGCMVDLLARNG 365
Query: 382 HLKEAYTFIMNMPFQPNPIVLRALLSA-SSIHDAKYQDGVGNEVRRRLLELEPRGSQNLV 440
++EA + MP +PN ++ +LLSA +I D K+ + E L+ELEP S N V
Sbjct: 366 CMEEARDLVRTMPMRPNAVLWGSLLSAYRTIGDVKHAECAVKE----LIELEPWNSGNYV 421
Query: 441 IVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWV 476
+++N YAE G W++V VR MK ++K G S V
Sbjct: 422 LLSNVYAEDGKWDEVEKVRALMKEKNIRKNPGQSMV 457
>gi|356524110|ref|XP_003530675.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Glycine max]
Length = 611
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 165/486 (33%), Positives = 254/486 (52%), Gaps = 19/486 (3%)
Query: 44 LYQIHAQIQV---SGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNL 100
L QIHAQ S N + +++ + + NLTYA + ++ N + WN L
Sbjct: 38 LKQIHAQTLRTVNSNHPNAIFLYTNILQHYSSLTQPNLTYATRVFHHFPNPN-SFMWNTL 96
Query: 101 IRGYAWSD------RPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
IR YA S + E + M+ + P T+P VLKACA L EG QV A+
Sbjct: 97 IRVYARSTNTNHKHKAMELYKTMMTMEEKTAVPDNHTFPIVLKACAYTFSLCEGKQVHAH 156
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V K G +SD Y N+LV FY +C A K+F M ER+ VSWN++I + A
Sbjct: 157 VLKHGFESDTYICNSLVHFYATCGCLDLAEKMFYKMSERNEVSWNIMIDSYAKGGIFDTA 216
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH---LQLIERGTVLNCQLGTAL 271
+ F +M+ + +PD TM V+SAC LG LSLG WVH L+ ++ V + + T L
Sbjct: 217 LRMFGEMQRV-HDPDGYTMQSVISACAGLGALSLGLWVHAYILKKCDKNMVDDVLVNTCL 275
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM-KNSSISPN 330
+DMY K G + A+ +F M ++ W++MILGLA HG A+ AL + M K I PN
Sbjct: 276 VDMYCKSGELEIAKQVFESMAFRDLNAWNSMILGLAMHGEAKAALNYYVRMVKVEKIVPN 335
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
+TF+GVL ACNH GMV++G +F M + ++P HY + D+ ARAG + EA +
Sbjct: 336 SITFVGVLSACNHRGMVDEGIVHFDMMTKEYNVEPRLEHYGCLVDLFARAGRINEALNLV 395
Query: 391 MNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPR--GSQNLVIVANKYAE 448
M +P+ ++ R+LL A A + + E+ +++ E E S V+++ YA
Sbjct: 396 SEMSIKPDAVIWRSLLDACCKQYASVE--LSEEMAKQVFESEGSVCSSGVYVLLSKVYAS 453
Query: 449 VGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLH 508
W V +R+ M G+ K G S +E+ G +H F++G + + IY+++ +
Sbjct: 454 ACRWNDVGLLRKLMSEKGVTKEPGCSIIEIDGVVHEFFAGDTTHPKSENIYKVVTEIEEK 513
Query: 509 MKVLNF 514
++ + +
Sbjct: 514 LESIGY 519
>gi|15231402|ref|NP_188004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273848|sp|Q9LRV9.1|PP228_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13880
gi|9294611|dbj|BAB02912.1| probable selenium-binding protein [Arabidopsis thaliana]
gi|332641909|gb|AEE75430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 748
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 151/450 (33%), Positives = 231/450 (51%), Gaps = 26/450 (5%)
Query: 63 LKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDR-----PREAVWVF 117
LKE ++ +L SKN+ + +N +I G+ D EA +F
Sbjct: 303 LKEAIKLFSLMPSKNV----------------VTYNAMISGFLQMDEITDEASSEAFKLF 346
Query: 118 IDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSC 177
+DM+RRG++P+ T+ VLKAC+ L G Q+ A + K+ SD + + L+ Y
Sbjct: 347 MDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALM 406
Query: 178 RRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVL 237
D + F ++ + SW +I V+N L A F ++ P+E T+ +++
Sbjct: 407 GSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMM 466
Query: 238 SACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVW 297
SAC + LS G+ + I+ G + T+ I MYAK G + A +F ++ +V
Sbjct: 467 SACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVA 526
Query: 298 TWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM 357
T+SAMI LAQHG A EAL +F +MK I PN FLGVL AC H G+V G +YF M
Sbjct: 527 TYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCM 586
Query: 358 EHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQ 417
++ + I P H+ + D+L R G L +A I++ FQ +P+ RALLS+ + Y+
Sbjct: 587 KNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRV----YK 642
Query: 418 DGV-GNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWV 476
D V G V RL+ELEP S + V++ N Y + G+ VR M++ G+KK +SW+
Sbjct: 643 DSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWI 702
Query: 477 ELGGSIHRFYSGYDSQVELAGIYQILETLN 506
+G H F S IY +LET++
Sbjct: 703 VIGNQTHSFAVADLSHPSSQMIYTMLETMD 732
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 136/294 (46%), Gaps = 18/294 (6%)
Query: 76 KNLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFT 131
+ L +AR + D +P I +N+LI GY +A+ +F++ + +K +FT
Sbjct: 96 RELGFARQLF-----DRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
Y L C E L+ G + V +GL V+ N L+ Y C + A +FD
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT---ELGNLSL 248
ER VSWN +I+ V E + KM G + VL AC G +
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 249 GKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ 308
G +H + G + + TAL+DMYAK G++ A LFS M NV T++AMI G Q
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQ 330
Query: 309 HG-----YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM 357
+ EA +LF +M+ + P+ TF VL AC+ A +E G R H +
Sbjct: 331 MDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYG-RQIHAL 383
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 146/307 (47%), Gaps = 6/307 (1%)
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
Y + + A+ + G ++ KS L+ +Y NNL+ Y CR A ++FD M
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 109
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
ER+++S+N +I+ + + +A+ F++ ++ + D+ T L C E +L LG+
Sbjct: 110 ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGEL 169
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+H ++ G L LIDMY+KCG + A LF R +E + +W+++I G + G
Sbjct: 170 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGA 229
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACN---HAGMVEDGYRYFHEMEHVHGIKPMRI 368
AEE L L + M ++ VL AC + G +E G H G++ +
Sbjct: 230 AEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMA-IHCYTAKLGMEFDIV 288
Query: 369 HYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRL 428
+ D+ A+ G LKEA MP N + A++S D + D +E +
Sbjct: 289 VRTALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAMISGFLQMD-EITDEASSEAFKLF 346
Query: 429 LELEPRG 435
++++ RG
Sbjct: 347 MDMQRRG 353
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 148/422 (35%), Positives = 230/422 (54%), Gaps = 8/422 (1%)
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
NL +L + + + + W +I Y+ + A+ + M R G+ P FT+ VL
Sbjct: 334 NLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVL 393
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
+AC + L Q+ + + K GL+SDV+ + L+ Y +A KVF +M V
Sbjct: 394 RACERLYDLK---QLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSV 450
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
WN II ++ EA+ + M+ +GF D++T+ VL ACT L L LG+ H+ +
Sbjct: 451 VWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHV 510
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
++ L L AL+DMY KCG++ A+ +F+RM + +V +WS MI GLAQ+G++ EAL
Sbjct: 511 LKFDQDL--ILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEAL 568
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
LF +MK PN++T LGVL AC+HAG+V +G+ YF M +++GI P R HY M D+
Sbjct: 569 NLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDL 628
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGS 436
L RA L + I M +P+ + R LL A A+ + + +L+L+P+ +
Sbjct: 629 LGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACR---ARQNVDLATYAAKEILKLDPQDT 685
Query: 437 QNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELA 496
V+++N YA W V+ VRR MK G++K G SW+E+ IH F G S ++
Sbjct: 686 GAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKSHPQID 745
Query: 497 GI 498
I
Sbjct: 746 EI 747
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 150/330 (45%), Gaps = 22/330 (6%)
Query: 75 SKNLTYAR---SILCNY-VNDS------VPIPWNNLIRGYAWSDRPREAVWVFIDMKRRG 124
SK+L R S C+Y VN S VP +L+ D P A+ V M+RRG
Sbjct: 222 SKHLQLLRPTSSRCCSYSVNSSLVSPHYVPPETESLLNHCYRRDLP-SAMHVLDSMERRG 280
Query: 125 IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDAC 184
+ TY ++K C + EG +V ++ +G + N L+ Y +A
Sbjct: 281 VWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQ 340
Query: 185 KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELG 244
+FD M ER+VVSW +I+ A+ M G P+ T VL AC L
Sbjct: 341 VLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLY 400
Query: 245 NLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMIL 304
+L K +H +++ G + + +ALID+Y+K G + A +F M + W+++I
Sbjct: 401 DL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIA 457
Query: 305 GLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIK 364
AQH +EAL L+ +M+ + T VL AC ++E G HVH +K
Sbjct: 458 AFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELG-----RQAHVHVLK 512
Query: 365 PMR--IHYHTMADILARAGHLKEAYTFIMN 392
+ I + + D+ + G L++A FI N
Sbjct: 513 FDQDLILNNALLDMYCKCGSLEDA-KFIFN 541
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 8/224 (3%)
Query: 33 SFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN-D 91
S L+ C L Q+H+ I GL++D + L+ S L A + + D
Sbjct: 391 SVLRACERLYDLKQLHSWIMKVGLESDVFVRSALID--VYSKMGELLEALKVFREMMTGD 448
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
SV WN++I +A EA+ ++ M+R G + T VL+AC +S L G Q
Sbjct: 449 SV--VWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQA 506
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
+V K D D+ NN L+ Y C DA +F+ M ++ V+SW+ +I +N +
Sbjct: 507 HVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFS 564
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQ 255
EA+ F MK G +P+ T+L VL AC+ G ++ G W + +
Sbjct: 565 MEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEG-WYYFR 607
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 17/208 (8%)
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
L A+ M+ G D T ++ C G + GK VH + G L
Sbjct: 266 LPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNI 325
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
LI+MY K + A++LF +M E NV +W+ MI + + A+ L + M + PN
Sbjct: 326 LINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPN 385
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVH------GIKPMRIHYHTMADILARAGHLK 384
TF VL AC ++++ +H G++ + D+ ++ G L
Sbjct: 386 MFTFSSVLRACER----------LYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGELL 435
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIH 412
EA M + +V ++++A + H
Sbjct: 436 EALKVFREM-MTGDSVVWNSIIAAFAQH 462
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/425 (34%), Positives = 231/425 (54%), Gaps = 12/425 (2%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I ++ SDR EA+ F M G++ T VL AC+ + L+ G ++ A
Sbjct: 180 VSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAY 239
Query: 155 VTKSG-LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
V ++ L + + + LV Y +CR+ +VFD + R + WN +I+ N +
Sbjct: 240 VLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEK 299
Query: 214 AVGYFVKM-KDLGFEPDETTMLVVLSACT-ELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
A+ F++M K G P+ TTM V+ AC L ++ GK +H I + +G+AL
Sbjct: 300 ALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSAL 359
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM-----KNSS 326
+DMYAKCG + +R +F+ M NV TW+ +I+ HG EEALELF NM +
Sbjct: 360 VDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGE 419
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
PN VTF+ V AC+H+G++ +G F+ M+H HG++P HY + D+L RAG L+EA
Sbjct: 420 AKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEA 479
Query: 387 YTFIMNMPFQPNPI-VLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANK 445
Y + MP + + + +LL A IH +G + LL LEP + + V+++N
Sbjct: 480 YELVNTMPAEFDKVGAWSSLLGACRIHQ---NVELGEVAAKNLLHLEPNVASHYVLLSNI 536
Query: 446 YAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
Y+ G+W K VR+ M+ +G+KK G SW+E +H+F +G S + ++ LETL
Sbjct: 537 YSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETL 596
Query: 506 NLHMK 510
+ M+
Sbjct: 597 SEKMR 601
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 157/344 (45%), Gaps = 34/344 (9%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
W + +R S+ REA+ +I+M G +P F +P VLKA + + L G Q+ A
Sbjct: 60 WVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAV 119
Query: 157 K---------------------SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSV 195
K G+ +TNN L+ Y R D+ +F+ +R +
Sbjct: 120 KFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDM 179
Query: 196 VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQ 255
VSWN +I+ ++ EA+ +F M G E D T+ VL AC+ L L +GK +H
Sbjct: 180 VSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAY 239
Query: 256 LIERGTVL-NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEE 314
++ ++ N +G+AL+DMY C V R +F + + W+AMI G A++G E+
Sbjct: 240 VLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEK 299
Query: 315 ALELFSNM-KNSSISPNYVTFLGVLCACNHA-GMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
AL LF M K + + PN T V+ AC H+ + G H + I+ M T
Sbjct: 300 ALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEI-----HAYAIRNMLASDIT 354
Query: 373 ----MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
+ D+ A+ G L + MP N I L+ A +H
Sbjct: 355 VGSALVDMYAKCGCLNLSRRVFNEMP-NKNVITWNVLIMACGMH 397
>gi|334188487|ref|NP_200728.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic; Flags: Precursor
gi|9759241|dbj|BAB09765.1| unnamed protein product [Arabidopsis thaliana]
gi|332009773|gb|AED97156.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 168/530 (31%), Positives = 272/530 (51%), Gaps = 44/530 (8%)
Query: 16 KPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSS 75
+ + N+ LS+ + +S L+ C + H+ IHA+I + DA ++ EL+R C S+
Sbjct: 17 RDPDSNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVC--STL 74
Query: 76 KNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFV 135
++ YA + +YV++ + +I G+ S R + V ++ M + P + V
Sbjct: 75 DSVDYAYDVF-SYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSV 133
Query: 136 LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSV 195
LKAC L ++ A V K G S ++ YG +A K+FD+M +R
Sbjct: 134 LKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDH 189
Query: 196 VSWNVII-----------------------TVC--------VENLWLGEAVGYFVKMKDL 224
V+ V+I TVC V N + +A+ F +M+
Sbjct: 190 VAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQME 249
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCA 284
+E T + VLSAC++LG L LG+WVH + + L+ +G ALI+MY++CG + A
Sbjct: 250 NVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEA 309
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA 344
R +F M + +V +++ MI GLA HG + EA+ F +M N PN VT + +L AC+H
Sbjct: 310 RRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHG 369
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRA 404
G+++ G F+ M+ V ++P HY + D+L R G L+EAY FI N+P +P+ I+L
Sbjct: 370 GLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGT 429
Query: 405 LLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKN 464
LLSA IH +G ++ +RL E E S V+++N YA G W++ + +R M++
Sbjct: 430 LLSACKIHGNME---LGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRD 486
Query: 465 VGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
G++K G S +E+ IH F G + IYQ L+ LN ++L F
Sbjct: 487 SGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELN---RILRF 533
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/438 (33%), Positives = 232/438 (52%), Gaps = 35/438 (7%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
W +I G+ ++ REA+ + I++ R G P++ ++ L ACA I + G + +
Sbjct: 523 WAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAI 582
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
K+G + Y N L+ Y C D VF + + VSWN +I+ EN L +A
Sbjct: 583 KTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARV 642
Query: 217 YFVKMK------------------------DL-------GFEPDETTMLVVLSACTELGN 245
F KM DL G +P++ T+ +LSAC LG
Sbjct: 643 VFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGA 702
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
+ LG+ H + + G +G +LI MY KCG +F M E ++ TW+A+++G
Sbjct: 703 IKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGYED-GFCVFEEMPEHDLITWNAVLVG 761
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKP 365
AQ+G +EA+++F M+ I P+ ++FLGVLCAC+HAG+V++G+ +F+ M +GI P
Sbjct: 762 CAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMP 821
Query: 366 MRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVR 425
+ HY M D+L RAG+L EA I NMP +P+ ++ ALL A IH +G V
Sbjct: 822 LVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIH---RNVELGQRVA 878
Query: 426 RRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRF 485
RL ++ S V+++N +A GMW+KV+ +R+ MK+ GL K G+SW+++ +H F
Sbjct: 879 ERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCF 938
Query: 486 YSGYDSQVELAGIYQILE 503
+G + ++ IY L+
Sbjct: 939 VTGDRTHDQIEEIYSALK 956
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 184/408 (45%), Gaps = 50/408 (12%)
Query: 41 KKHLYQIHAQIQVSG----LQNDAQILKELVRFCTLS---------SSKNLTYARSILCN 87
+ HL+Q + +IQ G ++ ++ E+++ +S + + AR +
Sbjct: 168 QTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDA 227
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL-- 145
+V ++ W L+ GYA R EA VF M R V+ A ISG
Sbjct: 228 FVGKNIRT-WTILLTGYAKEGRIEEAREVFESMTERN----------VVSWNAMISGYVQ 276
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT-- 203
N ++ + + +V + N++V Y C R +A ++FD M ER+ VSW V+I+
Sbjct: 277 NGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGY 336
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
V + + W EA FVKM PD++ +VVLSA T L +L L + I+ G
Sbjct: 337 VHISDYW--EAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEG 394
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
+ +G+A+++ Y + G++ A F M E N ++W+ MI AQ G ++A++L+ +
Sbjct: 395 DVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVP 454
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+++ T ++ A G ++ F E+ + P + ++ + + G L
Sbjct: 455 EQTVA----TKTAMMTAYAQVGRIQKARLIFDEI-----LNPNVVAWNAIIAGYTQNGML 505
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLEL 431
KEA MP + N A+++ V NE R LEL
Sbjct: 506 KEAKDLFQKMPVK-NSASWAAMIAGF----------VQNEESREALEL 542
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 126/287 (43%), Gaps = 36/287 (12%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +I Y + A+ +F+DM RGIKP + T +L AC + + G Q A
Sbjct: 653 VSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHAL 712
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ K G D+ ++ N+L+ Y C + C VF++M E +++WN ++ C +N EA
Sbjct: 713 IFKLGFDTFLFVGNSLITMYFKCGYEDGFC-VFEEMPEHDLITWNAVLVGCAQNGLGKEA 771
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M+ G PD+ + L VL AC+ G + G W H M
Sbjct: 772 IKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEG-WAHFN-----------------SM 813
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
K G + V+ ++ M+ L + GY EA L NM + P+ V +
Sbjct: 814 TQKYGIMPL------------VYHYTCMVDLLGRAGYLSEAEALIENM---PVKPDSVIW 858
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAG 381
+L AC VE G R + + KP Y ++++ A G
Sbjct: 859 EALLGACRIHRNVELGQRVAERLFQM--TKPKSATYVLLSNLFASQG 903
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 162/370 (43%), Gaps = 48/370 (12%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
W +I +A R +A+ ++ R + T T ++ A A++ + + + +
Sbjct: 430 WTTMIAAFAQCGRLDDAIQLY----ERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEI- 484
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
L+ +V N ++ Y ++A +F M ++ SW +I V+N EA+
Sbjct: 485 ---LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALE 541
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
+++ G P +++ LSAC +G++ +G+ +H I+ G N + LI MYA
Sbjct: 542 LLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYA 601
Query: 277 KCGAV-------------------------------GCARLLFSRMEEINVWTWSAMILG 305
KCG V AR++F +M + +V +W+A+I
Sbjct: 602 KCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISA 661
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKP 365
Q G+ E AL+LF +M I PN +T +L AC + G ++ G + FH + G
Sbjct: 662 YVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQ-FHALIFKLGFDT 720
Query: 366 MRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVR 425
+++ + + G+ ++ + MP + + I A+L + Q+G+G E
Sbjct: 721 FLFVGNSLITMYFKCGY-EDGFCVFEEMP-EHDLITWNAVLVGCA------QNGLGKEAI 772
Query: 426 RRLLELEPRG 435
+ ++E G
Sbjct: 773 KIFEQMEVEG 782
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 117/302 (38%), Gaps = 36/302 (11%)
Query: 111 REAVWV-------FIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA--NVTKSGLD 161
R A W+ F+ + G K E + + I L +V+ V +
Sbjct: 140 RHARWMDYLQQFKFVIRHKSGAKNKETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQ 199
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
DV + N+++ Y + +A +FD +++ +W +++T + + EA F M
Sbjct: 200 RDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESM 259
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
E + + ++S + G+L + + ++ E+ N +++ Y C +
Sbjct: 260 T----ERNVVSWNAMISGYVQNGDLKNARKLFDEMPEK----NVASWNSVVTGYCHCYRM 311
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
AR LF +M E N +W MI G EA ++F M + P+ F+ VL A
Sbjct: 312 SEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAI 371
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL---------ARAGHLKEAYTFIMN 392
++E + ++P+ I D++ R G L A F
Sbjct: 372 TG----------LDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFET 421
Query: 393 MP 394
MP
Sbjct: 422 MP 423
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/415 (34%), Positives = 221/415 (53%), Gaps = 6/415 (1%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
W +LI GYA +D P EA+ + M R KP FT+ +LKA + G Q+ A
Sbjct: 133 WTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTV 192
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
K DVY + L+ Y C R A VFD + ++ VSWN +I +
Sbjct: 193 KYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLL 252
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F +M+ GFE T V SA +G L GKWVH +I+ G L+ +G ++DMYA
Sbjct: 253 MFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYA 312
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
K G++ AR +F R+++ +V TW++M+ AQ+G EA+ F M+ + N +TFL
Sbjct: 313 KSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLS 372
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
+L AC+H G+V++G +YF M+ + ++P HY T+ D+L RAG L +A FI MP +
Sbjct: 373 ILTACSHGGLVKEGKQYFDMMKE-YNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMK 431
Query: 397 PNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKV 455
P V ALL + +H +AK +G + EL+P + V++ N YA G W+
Sbjct: 432 PTAAVWGALLGSCRMHKNAK----IGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAA 487
Query: 456 SNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+ VR+ MK G+KK SWVE+ S+H F + D+ IY+ E +++ ++
Sbjct: 488 ARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIR 542
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 128/264 (48%), Gaps = 1/264 (0%)
Query: 123 RGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRD 182
R + T Y ++ ACA L++ + A++ S V+ +N+L+ Y C D
Sbjct: 58 RELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVAD 117
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
A +VFD M R + SW +I +N EA+G M F+P+ T +L A
Sbjct: 118 ARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGA 177
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
+ +G+ +H ++ + +G+AL+DMYA+CG + A +F ++E N +W+A+
Sbjct: 178 SASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNAL 237
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
I G A+ G E L +F+ M+ + + T+ V A G +E G ++ H G
Sbjct: 238 IAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQG-KWVHAHMIKSG 296
Query: 363 IKPMRIHYHTMADILARAGHLKEA 386
+ +T+ D+ A++G + +A
Sbjct: 297 ERLSAFVGNTILDMYAKSGSMIDA 320
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 1/220 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN LI G+A + +F +M+R G + T FTY V A A I L +G V A+
Sbjct: 232 VSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAH 291
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ KSG + N ++ Y DA KVFD + ++ VV+WN ++T + EA
Sbjct: 292 MIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREA 351
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
V +F +M+ G ++ T L +L+AC+ G + GK + E ++D+
Sbjct: 352 VTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDL 411
Query: 275 YAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAE 313
+ G + A + +M + W A++ H A+
Sbjct: 412 LGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAK 451
>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 768
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/416 (35%), Positives = 228/416 (54%), Gaps = 4/416 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN+LI ++ EA+ +F +M+ +KP T +L AC L +G + +
Sbjct: 316 VSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSY 375
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ K GL DV N+L+ Y C A VF + +R VV+WN I+T CV++ + +
Sbjct: 376 LVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDV 435
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
F + D ++ VLSA ELG + K VH + G V + L ALID
Sbjct: 436 FKLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDT 495
Query: 275 YAKCGAVGCARLLFSRMEE-INVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
YAKCG++ A LF M +V++WS++I+G AQ GYA+EAL+LF+ M+N + PN+VT
Sbjct: 496 YAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVT 555
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
F+GVL AC+ G+V++G Y+ ME +GI P + H + D+LARAG L EA F+ M
Sbjct: 556 FVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQM 615
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
PF+P+ I+ LL+AS H+ +G +L ++P S V++ N YA G W
Sbjct: 616 PFEPDIIMWNTLLAASRTHN---DVEMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWN 672
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
+ + +++ M++ G++K G SW++L G + F S E +Y +L+ + M
Sbjct: 673 EFARLKKDMRSSGVQKSPGKSWIKLKGELKVFIVEDRSHPESDEMYTMLDLIGFEM 728
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 124/253 (49%), Gaps = 2/253 (0%)
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
D P+ W +I +A + R +A+ +F M R G P EF ++ACAE+ L G Q
Sbjct: 108 DRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQ 167
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
V A KS + N LV Y D +F+ + ++ + SW II +
Sbjct: 168 VHAQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGR 227
Query: 211 LGEAVGYFVKMKDLGF-EPDETTMLVVLSACTELGN-LSLGKWVHLQLIERGTVLNCQLG 268
+A+ F +M G P+E V AC+ + N L G+ +H ++ N G
Sbjct: 228 EMDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAG 287
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
+L DMYA+C + A +F R+E ++ +W+++I + G EA+ LFS M+ SS+
Sbjct: 288 CSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLK 347
Query: 329 PNYVTFLGVLCAC 341
P+ +T + +LCAC
Sbjct: 348 PDGITVMALLCAC 360
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 148/314 (47%), Gaps = 30/314 (9%)
Query: 139 CAEISGLNEGMQVQANVTKSG-----LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER 193
C+ + +G V ++ S L + +N+L+ YG C A VFD M +R
Sbjct: 50 CSRLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDR 109
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
+ VSW +I +N +A+G F M LG PDE + + AC ELG+L LG+ VH
Sbjct: 110 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVH 169
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
Q I+ + + AL+ MY+K G+VG LF R+ + ++++W ++I GLAQ G
Sbjct: 170 AQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREM 229
Query: 314 EALELFSNMKNSSI-SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI----KPMRI 368
+AL +F M + PN F V AC+ +V + Y E +HG+ K R
Sbjct: 230 DALHIFREMIAEGMHHPNEFHFGSVFRACS---VVINSLEY---GEQIHGLCVKYKLDRN 283
Query: 369 HYH--TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEV-- 424
Y ++ D+ AR L A + P+ L+S +S+ +A DG+ +E
Sbjct: 284 SYAGCSLGDMYARCNKLDSAMKVFYRIE-SPD------LVSWNSLINAFSADGLLSEAMV 336
Query: 425 ---RRRLLELEPRG 435
R L+P G
Sbjct: 337 LFSEMRYSSLKPDG 350
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 155/349 (44%), Gaps = 18/349 (5%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HAQ S + LV + S S +A L + D W ++I G A
Sbjct: 167 QVHAQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFA---LFERIRDKDLFSWGSIIAGLA 223
Query: 106 WSDRPREAVWVFIDMKRRGIK-PTEFTYPFVLKACAE-ISGLNEGMQVQANVTKSGLDSD 163
R +A+ +F +M G+ P EF + V +AC+ I+ L G Q+ K LD +
Sbjct: 224 QQGREMDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRN 283
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
Y +L Y C + A KVF + +VSWN +I + L EA+ F +M+
Sbjct: 284 SYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRY 343
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
+PD T++ +L AC L G+ +H L++ G + + +LI MY +C
Sbjct: 344 SSLKPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPS 403
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A +F + +V TW++++ QH + E+ +LF + +S S + ++ VL A
Sbjct: 404 AMDVFHETNDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAE 463
Query: 344 AGMVEDGYRYFHEMEHVH------GIKPMRIHYHTMADILARAGHLKEA 386
G YF + VH G+ I + + D A+ G L +A
Sbjct: 464 LG-------YFEMAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDA 505
>gi|297746423|emb|CBI16479.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 136/366 (37%), Positives = 216/366 (59%), Gaps = 2/366 (0%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M+R G+KP FTYPFV+KAC + G + + + K+G DSD Y N L+R Y +
Sbjct: 1 MQRVGLKPDNFTYPFVVKACGRSLVVGAGGAMHSIIVKAGFDSDRYVGNTLLRMYANLNA 60
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
A +VF++M R VVSW+ +I V +A+ F M +P+ T++ +LSA
Sbjct: 61 VGLARRVFNEMTVRDVVSWSSMIAGYVACNCQADALMVFRHMMLANEKPNSVTLVSLLSA 120
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
CT L N+ +G+ +H +I L+ LGTA+++MY+KCG + A +F+ + E N+ +W
Sbjct: 121 CTRLLNIGVGESIHSYIIVNCIGLDVALGTAILEMYSKCGHIEKALKVFNSLTEKNLQSW 180
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+ MI GLA H + E+A+ LF+ M+ + + P+ ++F +L AC+H G+V++G +F +M
Sbjct: 181 TIMISGLADHSHGEDAISLFTQMEQTGLQPDSMSFSEILSACSHLGLVDEGQTFFSQMVK 240
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
++ I+P HY M D+ ARAG ++EAY I NMP +PN ++LR+ + A +D + G
Sbjct: 241 IYNIRPTMEHYGCMVDMFARAGMIEEAYEIIKNMPMEPNSVILRSFIGACR-NDGRVF-G 298
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
+RR LLE+EP N V+ + + G W + +++R MK GLKK+ G S VE+
Sbjct: 299 FDENLRRLLLEIEPDLGANYVLASGVSSLSGCWNEAADLRVSMKEKGLKKVPGWSRVEVS 358
Query: 480 GSIHRF 485
G F
Sbjct: 359 GIATMF 364
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 133/316 (42%), Gaps = 40/316 (12%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H+ I +G +D + L+R ++ + AR + N + + W+++I GY
Sbjct: 32 MHSIIVKAGFDSDRYVGNTLLRM--YANLNAVGLARRVF-NEMTVRDVVSWSSMIAGYVA 88
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+ +A+ VF M KP T +L AC + + G + + + + + DV
Sbjct: 89 CNCQADALMVFRHMMLANEKPNSVTLVSLLSACTRLLNIGVGESIHSYIIVNCIGLDVAL 148
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
++ Y C A KVF+ + E+++ SW ++I+ ++ +A+ F +M+ G
Sbjct: 149 GTAILEMYSKCGHIEKALKVFNSLTEKNLQSWTIMISGLADHSHGEDAISLFTQMEQTGL 208
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
+PD + +LSAC+ HL L++ G Q+ + ++ GC
Sbjct: 209 QPDSMSFSEILSACS-----------HLGLVDEGQTFFSQM-VKIYNIRPTMEHYGCMVD 256
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
+F+R G EEA E+ NM + PN V + AC + G
Sbjct: 257 MFAR------------------AGMIEEAYEIIKNMP---MEPNSVILRSFIGACRNDGR 295
Query: 347 V----EDGYRYFHEME 358
V E+ R E+E
Sbjct: 296 VFGFDENLRRLLLEIE 311
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 175/535 (32%), Positives = 264/535 (49%), Gaps = 74/535 (13%)
Query: 43 HLYQIHAQIQVSGLQNDAQILKELVRF-CTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
L+QIHAQI + L ++++++ +L+ C+L K+L YA SI + + ++ + +N LI
Sbjct: 55 QLHQIHAQIFLHNLFSNSRVVTQLISSSCSL---KSLDYALSIFRCFDHPNLFV-FNALI 110
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
RG A + R +V F+ M R I+P T PFVLK+ A + + G + V K GL+
Sbjct: 111 RGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLE 170
Query: 162 SDVYTNNNLVRFY---------------------------------GSCR--RKRDACKV 186
D + +LV Y G C+ A +
Sbjct: 171 FDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASL 230
Query: 187 FDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL---------------------- 224
F+ M ER+ SWN +I V N L A FV+M +
Sbjct: 231 FEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKAL 290
Query: 225 ---------GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY 275
G P++ T++ L ACT++G L +G+ +H L G LN +GTAL+DMY
Sbjct: 291 SMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMY 350
Query: 276 AKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFL 335
AKCG + A +F + ++ TWS MI G A HG ++AL+ F MK++ I+P+ V FL
Sbjct: 351 AKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFL 410
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPF 395
+L AC+H+G V+ G +F M + I+P HY + D+L RAG L EA +FI +MP
Sbjct: 411 AILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPI 470
Query: 396 QPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKV 455
P+ ++ AL A H + E +LL+LEP+ + V ++N YA VG WE V
Sbjct: 471 NPDFVIWGALFCACRAHKNIEMAELTAE---KLLQLEPKHPGSYVFLSNVYAAVGRWEDV 527
Query: 456 SNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
VR MKN G++K G S++E+ G +H F +G + V I LE + K
Sbjct: 528 ERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAK 582
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 160/517 (30%), Positives = 260/517 (50%), Gaps = 47/517 (9%)
Query: 32 LSFLKLCCSKKHLYQ----IHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSI 84
+ F+ C+ K Y +HAQ G+ + A + ++ C L +T AR +
Sbjct: 137 IPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGL-----ITSARRV 191
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
+ +++ + WN++I GY+ R EAV +F +M+ G++P FT +L +
Sbjct: 192 F-DDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGN 250
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER----------- 193
+ G V ++ +G++ D N L+ Y C + A VFD M ++
Sbjct: 251 FDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINA 310
Query: 194 --------------------SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTM 233
+VVSWN II V+ EAV F +M D G ++TT+
Sbjct: 311 YANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTL 370
Query: 234 LVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEE 293
+ +LS+C+ +G+L+LGK H + + L+ L A+IDMYAKCGA+ A +F M E
Sbjct: 371 VAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPE 430
Query: 294 INVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRY 353
N +W+ +I LA HGY +EA+E+F M+ S + P+ +TF G+L AC+H+G+V+ G Y
Sbjct: 431 KNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHY 490
Query: 354 FHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHD 413
F M GI P HY M D+L R G L EA + I MP +P+ +V ALL A +
Sbjct: 491 FEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYG 550
Query: 414 AKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGM 473
+G ++ ++LLEL S V+++N Y+E W+ + N+ + + G+KK + +
Sbjct: 551 ---NLAIGKQIMKQLLELGRYNSGLYVLLSNMYSESQRWDDMKNIWKILDQNGIKKCRAI 607
Query: 474 SWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
S++E+ G ++F IY +L L H+K
Sbjct: 608 SFIEIDGCCYQFMVDDKRHGASTSIYSMLGQLMDHLK 644
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 140/452 (30%), Positives = 220/452 (48%), Gaps = 57/452 (12%)
Query: 23 DLLSKARQCLSFL-KLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSS---KNL 78
+L S Q L +L C S K L +HAQI + GL L +LV SSS ++L
Sbjct: 30 ELKSPTHQTLHYLIDQCISLKQLKHVHAQIILHGLATQVLTLGKLV-----SSSVQLRDL 84
Query: 79 TYARSILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPF 134
YA + D +P P +N+LI+GY+ S P +++ ++ M GI P +FT PF
Sbjct: 85 RYAHKLF-----DQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPF 139
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
VLKACA S G+ V A K G+ S N ++ Y +C A +VFDD+ ER+
Sbjct: 140 VLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERT 199
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHL 254
+VSWN +I + EAV F +M+++G EPD T++ +LS T+ GN LG++VHL
Sbjct: 200 LVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHL 259
Query: 255 QLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE- 313
++ G ++ + AL+DMYAKCG + CA+ +F +M + +V +W+ MI A HG +
Sbjct: 260 HMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDC 319
Query: 314 ------------------------------EALELFSNMKNSSISPNYVTFLGVLCACNH 343
EA++LF M +S + N T + +L +C+H
Sbjct: 320 ALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSH 379
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
G + G + H + I + + D+ A+ G L+ A MP + N +
Sbjct: 380 MGDLALG-KQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMP-EKNAVSWN 437
Query: 404 ALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
++ A ++H G G E +++ G
Sbjct: 438 VIIGALALH------GYGKEAIEMFEKMQASG 463
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/425 (33%), Positives = 226/425 (53%), Gaps = 3/425 (0%)
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
L + D I W ++ G+ + +A+ F M+ +GI ++T+ +L AC +S
Sbjct: 228 LFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSA 287
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L +G Q+ A + ++ D +V+ + LV Y CR + A F M ++++SW +I
Sbjct: 288 LEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVG 347
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
+N EAV F +M+ G +PD+ T+ V+S+C L +L G H + G +
Sbjct: 348 YGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHY 407
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+ AL+ +Y KCG++ A LF M + +W+A++ G AQ G A+E ++LF M
Sbjct: 408 ITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLA 467
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ P+ VTF+GVL AC+ AG VE G YFH M+ HGI P+ HY M D+ +R+G LK
Sbjct: 468 KDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLK 527
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
EA FI MP P+ I LLSA + + +G LLE++P+ + V++ +
Sbjct: 528 EAEEFIKQMPMHPDAIGWGTLLSACRL---RGDMEIGQWAAENLLEIDPQNPASYVLLCS 584
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILET 504
+A G W +V+ +RR M++ +KK G SW++ +H F + S GIY+ LE
Sbjct: 585 MHATKGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEW 644
Query: 505 LNLHM 509
LN M
Sbjct: 645 LNSKM 649
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 158/339 (46%), Gaps = 42/339 (12%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRG--IKPTEFTYPFVLKACAEISGLNEGMQVQ 152
+ +N +I G++ AV ++ + R G ++P+ T ++ A + + G Q
Sbjct: 104 VSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFH 163
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM---------------------- 190
+ + G + + + LV Y DA +VFD+M
Sbjct: 164 CQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVE 223
Query: 191 ---------CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
+R ++W ++T +N +A+ +F +M+ G D+ T +L+AC
Sbjct: 224 EARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACG 283
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
L L GK +H +I N +G+AL+DMY+KC ++ A F RM N+ +W+A
Sbjct: 284 ALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTA 343
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
+I+G Q+G +EEA+ +FS M+ I P+ T V+ +C + +E+G + FH + V
Sbjct: 344 LIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQ-FHCLALVS 402
Query: 362 GIKPMRIHYHTMADIL----ARAGHLKEAYTFIMNMPFQ 396
G+ +HY T+++ L + G +++A+ M F
Sbjct: 403 GL----MHYITVSNALVTLYGKCGSIEDAHRLFDEMLFH 437
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/415 (34%), Positives = 221/415 (53%), Gaps = 6/415 (1%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
W +LI GYA +D P EA+ + M R KP FT+ +LKA + G Q+ A
Sbjct: 133 WTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTV 192
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
K DVY + L+ Y C R A VFD + ++ VSWN +I +
Sbjct: 193 KYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLL 252
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F +M+ GFE T V SA +G L GKWVH +I+ G L+ +G ++DMYA
Sbjct: 253 MFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYA 312
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
K G++ AR +F R+++ +V TW++M+ AQ+G EA+ F M+ + N +TFL
Sbjct: 313 KSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLS 372
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
+L AC+H G+V++G +YF M+ + ++P HY T+ D+L RAG L +A FI MP +
Sbjct: 373 ILTACSHGGLVKEGKQYFDMMKE-YNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMK 431
Query: 397 PNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKV 455
P V ALL + +H +AK +G + EL+P + V++ N YA G W+
Sbjct: 432 PTAAVWGALLGSCRMHKNAK----IGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAA 487
Query: 456 SNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+ VR+ MK G+KK SWVE+ S+H F + D+ IY+ E +++ ++
Sbjct: 488 ARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIR 542
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 147/313 (46%), Gaps = 8/313 (2%)
Query: 123 RGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRD 182
R + T Y ++ ACA L++ + A++ S V+ +N+L+ Y C D
Sbjct: 58 RELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVAD 117
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
A +VFD M R + SW +I +N EA+G M F+P+ T +L A
Sbjct: 118 ARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGA 177
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
+ +G+ +H ++ + +G+AL+DMYA+CG + A +F ++E N +W+A+
Sbjct: 178 SASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNAL 237
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
I G A+ G E L +F+ M+ + + T+ V A G +E G ++ H G
Sbjct: 238 IAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQG-KWVHAHMIKSG 296
Query: 363 IKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGN 422
+ +T+ D+ A++G + +A + + + + + ++L+A + Q G+G
Sbjct: 297 ERLSAFVGNTILDMYAKSGSMIDARK-VFDRVDKKDVVTWNSMLTAFA------QYGLGR 349
Query: 423 EVRRRLLELEPRG 435
E E+ G
Sbjct: 350 EAVTHFEEMRKCG 362
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 1/220 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN LI G+A + +F +M+R G + T FTY V A A I L +G V A+
Sbjct: 232 VSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAH 291
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ KSG + N ++ Y DA KVFD + ++ VV+WN ++T + EA
Sbjct: 292 MIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREA 351
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
V +F +M+ G ++ T L +L+AC+ G + GK + E ++D+
Sbjct: 352 VTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDL 411
Query: 275 YAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAE 313
+ G + A + +M + W A++ H A+
Sbjct: 412 LGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAK 451
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 166/487 (34%), Positives = 259/487 (53%), Gaps = 14/487 (2%)
Query: 31 CL-SFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILC 86
CL S LK C LYQ +H GL D L+ S + AR +
Sbjct: 531 CLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDM--YSKCGIIKDARKVFS 588
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
+ SV + N LI GY+ + EAV +F +M RG+ P+E T+ +++AC + L
Sbjct: 589 SLPEWSV-VSMNALIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLT 646
Query: 147 EGMQVQANVTKSGLDSD-VYTNNNLVRFYGSCRRKRDACKVFDDMCE-RSVVSWNVIITV 204
G Q +TK G S+ Y +L+ Y + R +AC +F ++ +S+V W +++
Sbjct: 647 LGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSG 706
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
+N + EA+ ++ +M+ G PD+ T + VL C+ L +L G+ +H + L+
Sbjct: 707 HSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLD 766
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEE-INVWTWSAMILGLAQHGYAEEALELFSNMK 323
LIDMYAKCG + + +F M NV +W+++I G A++GYAE+AL++F +M+
Sbjct: 767 ELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMR 826
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
S I P+ +TFLGVL AC+HAG V DG + F M +GI+ H M D+L R G+L
Sbjct: 827 QSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYL 886
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
+EA FI +P+ + +LL A IH + + E +L+ELEP+ S V+++
Sbjct: 887 QEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAE---KLIELEPQNSSAYVLLS 943
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N YA G WEK + +R+ M++ G+KK+ G SW+++ H F +G S E+ I LE
Sbjct: 944 NIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLE 1003
Query: 504 TLNLHMK 510
L MK
Sbjct: 1004 DLYDLMK 1010
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 152/296 (51%), Gaps = 4/296 (1%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+HA+ GL ++ + LV ++ S A + + + + + WN +IRGYA
Sbjct: 349 VHAEAIKLGLASNIYVGSSLV---SMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAH 405
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+ + + +F+DMK G +FT+ +L CA L G Q + + K L +++
Sbjct: 406 NGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFV 465
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
N LV Y C DA ++F+ MC+R V+WN II V++ EA F +M G
Sbjct: 466 GNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGI 525
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
D + L ACT + L GK VH ++ G + G++LIDMY+KCG + AR
Sbjct: 526 VSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARK 585
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
+FS + E +V + +A+I G +Q+ EEA+ LF M ++P+ +TF ++ AC+
Sbjct: 586 VFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACH 640
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 153/316 (48%), Gaps = 2/316 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I G+ A+ F +M++ +K T T VL A ++ L+ G+ V A
Sbjct: 293 VAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAE 352
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K GL S++Y ++LV Y C + A KVF+ + E++ V WN +I N +
Sbjct: 353 AIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKV 412
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F+ MK G+ D+ T +LS C +L +G H +I++ N +G AL+DM
Sbjct: 413 MELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDM 472
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCGA+ AR +F RM + + TW+ +I Q EA +LF M I +
Sbjct: 473 YAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACL 532
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
L AC H + G + H + G+ ++ D+ ++ G +K+A ++P
Sbjct: 533 ASTLKACTHVHGLYQG-KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Query: 395 FQPNPIVLRALLSASS 410
+ + + + AL++ S
Sbjct: 592 -EWSVVSMNALIAGYS 606
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 156/353 (44%), Gaps = 39/353 (11%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIH + GL+ ++ LV + ++ AR + ++ D + W L GY
Sbjct: 181 QIHCSMIKMGLERNSYCGGALVDM--YAKCDRISDARRVF-EWIVDPNTVCWTCLFSGYV 237
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ P EAV VF M+ G +P + V+
Sbjct: 238 KAGLPEEAVLVFERMRDEGHRPDHLAFVTVI----------------------------- 268
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N +R + +DA +F +M VV+WNV+I+ + A+ YF M+
Sbjct: 269 --NTYIRL----GKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSS 322
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+ +T+ VLSA + NL LG VH + I+ G N +G++L+ MY+KC + A
Sbjct: 323 VKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAA 382
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F +EE N W+AMI G A +G + + +ELF +MK+S + + TF +L C +
Sbjct: 383 KVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASH 442
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
+E G + FH + + + + D+ A+ G L++A M + N
Sbjct: 443 DLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDN 494
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 129/294 (43%), Gaps = 39/294 (13%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H++ + G+ ++ ++ +V + ++YA +++ V WN+++ Y+
Sbjct: 82 VHSKSLILGIDSEGRLGNAIVDL--YAKCAQVSYAEKQF-DFLEKDVT-AWNSMLSMYSS 137
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+P + + F+ + I P +FT+ VL CA + + G Q+ ++ K GL+ + Y
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYC 197
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
LV Y C R DA +VF+ + + + V W + + V+ EAV F +M+D G
Sbjct: 198 GGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH 257
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
PD HL + +I+ Y + G + ARL
Sbjct: 258 RPD-----------------------HLAFV------------TVINTYIRLGKLKDARL 282
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
LF M +V W+ MI G + G A+E F NM+ SS+ T VL A
Sbjct: 283 LFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 123/271 (45%), Gaps = 9/271 (3%)
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
L G V + G+DS+ N +V Y C + A K FD E+ V +WN +++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLS 133
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
+ G+ + FV + + P++ T +VLS C N+ G+ +H +I+ G
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
N G AL+DMYAKC + AR +F + + N W+ + G + G EEA+ +F M+
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+ P+++ F+ V+ G ++D F EM P + ++ M + G
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKRGCE 308
Query: 384 KEAYTFIMNM---PFQPNPIVLRALLSASSI 411
A + NM + L ++LSA I
Sbjct: 309 TVAIEYFFNMRKSSVKSTRSTLGSVLSAIGI 339
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/433 (34%), Positives = 237/433 (54%), Gaps = 15/433 (3%)
Query: 86 CNYVNDS------VP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFV 135
C Y+ D+ +P I W+ LI YA S + +A +F+ M R + P EF+ V
Sbjct: 299 CGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGV 358
Query: 136 LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSV 195
L+ACA ++ L+ G Q+ V K G +S+++ N L+ Y CR ++ ++F + + +
Sbjct: 359 LQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANE 418
Query: 196 VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQ 255
VSWN II ++ + +A+ F +M+ + T VL AC ++ +H
Sbjct: 419 VSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIH-S 477
Query: 256 LIERGTVLNCQL-GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEE 314
LIE+ T N + +LID YAKCG + A +F + + +V +W+A+I G A HG A +
Sbjct: 478 LIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATD 537
Query: 315 ALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMA 374
ALELF+ M S PN VTF+ +L C G+V G F+ M H IKP HY +
Sbjct: 538 ALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIV 597
Query: 375 DILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPR 434
+L RAG L +A FI ++P P+P+V RALLS+ +H +G ++LE+EP+
Sbjct: 598 RLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHK---NVALGKFSAEKVLEIEPQ 654
Query: 435 GSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVE 494
V+++N YA G+ ++V+ +R+ M+N+G+KK G+SWVE+ G +H F G +
Sbjct: 655 DETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPD 714
Query: 495 LAGIYQILETLNL 507
+ I +LE LNL
Sbjct: 715 MRIINAMLEWLNL 727
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 154/318 (48%), Gaps = 2/318 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W ++ Y+ +D P +A+ F M+ G KP F VLKA +S G +
Sbjct: 217 VTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGC 276
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K+ D++ + L+ Y C DA VF+ + V+ W+ +I+ ++ +A
Sbjct: 277 AVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQA 336
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
F++M P+E ++ VL AC + L LG+ +H +I+ G +G AL+D+
Sbjct: 337 FEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDV 396
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKC + + +F + + N +W+ +I+G Q G+AE+AL +F M+ + + VTF
Sbjct: 397 YAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTF 456
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
VL AC + ++ + H + I +++ D A+ G +++A ++
Sbjct: 457 SSVLRACANTASIKHTVQ-IHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESI- 514
Query: 395 FQPNPIVLRALLSASSIH 412
Q + + A++S ++H
Sbjct: 515 IQCDVVSWNAIISGYALH 532
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 121/256 (47%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ + L++GYA EA +F ++R G + F +LK + + A
Sbjct: 116 VSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHAC 175
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K G D + + ++L+ Y C A VFD + + V+W +++ EN +A
Sbjct: 176 ACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDA 235
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F KM+ G +P+ + VL A L + LGK +H ++ +G AL+DM
Sbjct: 236 LNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDM 295
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG + AR +F + +V WS +I AQ E+A E+F M SS+ PN +
Sbjct: 296 YAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSL 355
Query: 335 LGVLCACNHAGMVEDG 350
GVL AC + ++ G
Sbjct: 356 SGVLQACANVAFLDLG 371
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 162/371 (43%), Gaps = 48/371 (12%)
Query: 135 VLKACAEISGLNEGMQVQANVTKSG--LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
+L+ C G V A V + G D + N L+ Y A ++FD M E
Sbjct: 53 LLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPE 112
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
R++VS+ ++ EA G F +++ G E + + +L + L +
Sbjct: 113 RNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCI 172
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H + G N +G++LID Y+ CGAV AR +F + + TW+AM+ +++
Sbjct: 173 HACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIP 232
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCA--CNHAGMVEDG-----YRYFHEME-HVHGIK 364
E+AL FS M+ + PN VL A C + ++ G + + E HV G
Sbjct: 233 EDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGG-- 290
Query: 365 PMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEV 424
+ D+ A+ G++++A T +P + ++L + L S + YQ+ E+
Sbjct: 291 -------ALLDMYAKCGYIEDARTVFEIIPH--DDVILWSFL--ISRYAQSYQNEQAFEM 339
Query: 425 RRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHR 484
R++ R S +V N+++ G+ + +NV ++++LG IH
Sbjct: 340 FLRMM----RSS----VVPNEFSLSGVLQACANV---------------AFLDLGQQIHN 376
Query: 485 FYS--GYDSQV 493
GY+S++
Sbjct: 377 LVIKLGYESEL 387
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 98/223 (43%), Gaps = 34/223 (15%)
Query: 33 SFLKLCC---SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S L+ C S KH QIH+ I+ S ND + L+ TYA+ C +
Sbjct: 458 SVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLID----------TYAK---CGCI 504
Query: 90 NDSVP----------IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKAC 139
D++ + WN +I GYA R +A+ +F M + KP + T+ +L C
Sbjct: 505 RDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVC 564
Query: 140 AEISGLNEGMQVQANVT---KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSV 195
+N+G+ + ++T + D YT +VR G R DA K D+ S
Sbjct: 565 GSTGLVNQGLSLFNSMTMDHRIKPSMDHYT--CIVRLLGRAGRLNDALKFIGDIPSTPSP 622
Query: 196 VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
+ W +++ CV + A+G F K L EP + T V+LS
Sbjct: 623 MVWRALLSSCV--VHKNVALGKFSAEKVLEIEPQDETTYVLLS 663
>gi|357150199|ref|XP_003575376.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Brachypodium distachyon]
Length = 523
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 177/537 (32%), Positives = 262/537 (48%), Gaps = 56/537 (10%)
Query: 15 PKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSS 74
P P + D ++ L C + HL Q+H + V+ +L+RF +L
Sbjct: 3 PAPPFSHGDFVA-------VLSRCATLAHLKQLHGRSVVTARAASQSTTFQLLRFASLRL 55
Query: 75 SKNLTYARSILCNYVNDSVPIPWNNLIRG--------YAWSDRPREAVWVFIDMKRRG-I 125
S L YAR + DS P P L +A+ +F+ M RRG
Sbjct: 56 S-CLPYARRLF-----DSTPHPNVFLYSAMLSAYAAASPAQAYGHDALALFLRMLRRGRP 109
Query: 126 KPTEFTYPFVLKACAEI--------------SGLNE---------------GMQVQANVT 156
P +F YP VL+A I SG + GM + A
Sbjct: 110 APNQFVYPLVLRAACAIGVQLVRSIHSHACKSGFHAYDVIRTSLLDGYSRYGMMLDARKL 169
Query: 157 KSGL-DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
GL + +V + LV Y + DA +FD M ER V +WN +IT C +N EAV
Sbjct: 170 FDGLTERNVISWTALVSGYARAGKIGDAIVLFDRMPERDVAAWNAMITGCTQNGLFVEAV 229
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY 275
G +M D GF+ + TT+ VLSAC LG L +GK VH + LIDMY
Sbjct: 230 GICSRMVDEGFQLNGTTVSCVLSACGHLGMLKIGKVVHGYAWRSCVGFGSSVVNGLIDMY 289
Query: 276 AKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFL 335
KCG + AR +F + ++ TW+++I LA HG+++ A+ +F M++ I P+ VTF+
Sbjct: 290 GKCGNLKEARWMFDEFSDRSLTTWNSLINCLALHGHSKSAIAVFDEMRDEGIEPDVVTFV 349
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPF 395
G+L AC H G V++G YF M I+P HY + D+L RAG ++A I +M
Sbjct: 350 GLLNACTHGGFVDEGLTYFKLMCDELRIEPEIEHYGCIVDLLGRAGRFEDAMNVINDMKV 409
Query: 396 QPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKV 455
QP+ ++ +LL+A H Q + R+LL+L P + +V++AN Y+E G WE+V
Sbjct: 410 QPDEVIWGSLLNACRTH---RQLELAEFSVRKLLQLNPNNANYVVMLANLYSEGGSWEEV 466
Query: 456 SNVRRFMK-NVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
+ +R+ MK ++ KK+ G SW+E+ HRFYSG D+ E IY L+ L M++
Sbjct: 467 TKIRKLMKEDIMGKKLPGCSWIEVDRKTHRFYSGDDAHPESEDIYDTLDELAASMEM 523
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 181/558 (32%), Positives = 281/558 (50%), Gaps = 79/558 (14%)
Query: 29 RQCLSFLKLCCSK---KHLYQIHAQIQVSGLQN-DAQILKELVRFCTLSSSK-NLTYARS 83
R+ + L C ++ + L++I AQI S + + D I+ V+F +SSS NL ++
Sbjct: 22 RKTIHLLLRCATQLSMRQLFEIQAQIIASPIPSIDPNIIA--VKFIGVSSSHGNLRHSVL 79
Query: 84 ILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFID--MKRRGIKPTEFTYPFVLKACAE 141
I ++++ +N L++ ++ + + F + + P E+T+ VLKACA
Sbjct: 80 IFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAG 139
Query: 142 ISGLNEGMQVQANVTKSGLDS-------------------------------DVYTNNNL 170
++ + EG +V VTK G +S DV + N L
Sbjct: 140 LAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTL 199
Query: 171 VR---FYGSCRRKR----------------------------DACKVFDDMCERSVVSWN 199
+ F G + R +A ++F++M R+VVSWN
Sbjct: 200 ISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWN 259
Query: 200 VIITVCVENLWLGEAVGYFVKMK-DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
+I +N +A+ F +M+ + G P++ T++ VLSAC LG L LGKW+H + I
Sbjct: 260 AMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIH-RFIR 318
Query: 259 RGTV-LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALE 317
R + + LG AL DMYAKCG V A+ +F M E +V +WS +I+GLA +GYA EA
Sbjct: 319 RNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFN 378
Query: 318 LFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL 377
F+ M + PN ++F+G+L AC HAG+V+ G YF M V+GI P HY + D+L
Sbjct: 379 FFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLL 438
Query: 378 ARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGV-GNEVRRRLLELEPRGS 436
+RAG L +A + I +MP QPN IV ALL I Y+D G V R+LEL+ S
Sbjct: 439 SRAGRLDQAESLINSMPMQPNVIVWGALLGGCRI----YKDAERGERVVWRILELDSNHS 494
Query: 437 QNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELA 496
+LV +AN YA +G + ++ R M++ K G SW+E+ S++ F+ G S +
Sbjct: 495 GSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSL 554
Query: 497 GIYQILETLNLHMKVLNF 514
IY ++ L MKV +
Sbjct: 555 RIYSMIRELKWKMKVAGY 572
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 164/519 (31%), Positives = 258/519 (49%), Gaps = 69/519 (13%)
Query: 59 DAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFI 118
D ++ + + C+ S NL A S N N +V + +N LIRG +A+ ++
Sbjct: 9 DCFLVNQFISACSNLSCINL--AASAFANVQNPNVLV-FNALIRGCVHCCYSEQALVHYM 65
Query: 119 DMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFY---- 174
M R + PT +++ ++KAC + G V +V K G DS V+ L+ FY
Sbjct: 66 HMLRNNVMPTSYSFSSLIKACTLLVDSAFGEAVHGHVWKHGFDSHVFVQTTLIEFYSTFG 125
Query: 175 --GSCRR------KRD-------------------ACKVFDDMCERSVVSWNVII----- 202
G RR +RD A ++FD+M E++V +WN +I
Sbjct: 126 DVGGSRRVFDDMPERDVFAWTTMISAHVRDGDMASAGRLFDEMPEKNVATWNAMIDGYGK 185
Query: 203 --------------------------TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVV 236
N E + F + D G PDE TM V
Sbjct: 186 LGNAESAEFLFNQMPARDIISWTTMMNCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTV 245
Query: 237 LSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINV 296
+SAC LG L+LGK VHL L+ +G L+ +G++LIDMYAKCG++ A L+F +++ N+
Sbjct: 246 ISACAHLGALALGKEVHLYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALLVFYKLQTKNL 305
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
+ W+ +I GLA HGY EEAL +F M+ I PN VTF+ +L AC HAG +E+G R+F
Sbjct: 306 FCWNCIIDGLATHGYVEEALRMFGEMERKRIRPNAVTFISILTACTHAGFIEEGRRWFMS 365
Query: 357 MEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKY 416
M + I P HY M D+L++AG L++A I NM +PN + ALL+ +H
Sbjct: 366 MVQDYCIAPQVEHYGCMVDLLSKAGLLEDALEMIRNMTVEPNSFIWGALLNGCKLHK--- 422
Query: 417 QDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGL-KKMKGMSW 475
+ + + L+ LEP S + ++ N YAE W +V+ +R MK++G+ K+ G SW
Sbjct: 423 NLEIAHIAVQNLMVLEPSNSGHYSLLVNMYAEENRWNEVAKIRTTMKDLGVEKRCPGSSW 482
Query: 476 VELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
VE+ ++H F + + ++ +L L+ +++ +
Sbjct: 483 VEINKTVHLFAASDTYHPSYSQLHLLLAELDDQLRLAGY 521
>gi|326499323|dbj|BAK06152.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 162/467 (34%), Positives = 239/467 (51%), Gaps = 15/467 (3%)
Query: 44 LYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP----WNN 99
L Q HA++ V+G ++ +L + + + + S P P +++
Sbjct: 23 LKQAHARLVVTGHGRSLPLITKLATLAVAAGAAPYAH-------LLATSHPAPDSFLFSS 75
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
L R A P A+ + + + + FT+ V KACA++S L G + A+ G
Sbjct: 76 LTRTAAHHGLPVAAIAFYRGLLSAALPFSSFTFTAVAKACADLSALRTGAAIHAHSILLG 135
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
SD + LV Y C + A K+FD + +RSVV+WN +I+ +N +G +
Sbjct: 136 FGSDRFVLTALVVLYSKCGQLGVARKLFDAIRDRSVVAWNAMISGYEQNGLAERGIGVYK 195
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+M+ PD T + LSAC + G L LG+ V +++ ++ LG+AL++MYA+CG
Sbjct: 196 EMQAAKAVPDSMTFVATLSACAQAGALDLGREVERRVVSERMDISVFLGSALVNMYARCG 255
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
V AR F ++E NV TW++MI G HG+ EA++LF M+ PN+VTF+ VL
Sbjct: 256 VVDKARRWFDALQERNVVTWTSMIAGYGMHGHGREAIKLFHLMRCEGPPPNHVTFVAVLS 315
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN-MPFQPN 398
AC HAG+V +G F M+ V+G+ P HY +M D+ RAG L EA FI + MP +P
Sbjct: 316 ACAHAGLVMEGRDAFACMKRVYGLVPRVEHYCSMVDMFGRAGLLDEAMQFISDYMPGEPG 375
Query: 399 PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
P V A+L A +H +G EV RL+ LEP V+++N YA G V V
Sbjct: 376 PEVWTAVLGACKMHK---NFNLGVEVAERLIALEPENPSYHVLLSNIYALSGKMHHVEKV 432
Query: 459 RRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
R M LKK G S +ELGG+ H F G S + IY LE L
Sbjct: 433 RNTMIKRRLKKQIGFSLIELGGTSHLFRMGEKSHPQTTEIYHYLEEL 479
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/509 (30%), Positives = 255/509 (50%), Gaps = 34/509 (6%)
Query: 36 KLCCSKKHLYQIHAQIQVSGLQNDAQILKELV-------------RFCTLSSSKNLTYAR 82
KL SK+ L QIH + G + D + L+ + SS +++
Sbjct: 75 KLKASKEGL-QIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYT 133
Query: 83 SILCNYVN-----------DSVPI----PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKP 127
+++ Y + D +P+ WN +I GY + +EA+ +F +M + ++P
Sbjct: 134 ALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRP 193
Query: 128 TEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVF 187
E T V+ A A + G QV + + G S++ N L+ FY C AC +F
Sbjct: 194 DESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLF 253
Query: 188 DDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLS 247
+ + V+SWN++I EA+ F +M G P++ TML +L AC LG +
Sbjct: 254 LGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAID 313
Query: 248 LGKWVHLQLIER--GTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
+G+W+H+ + +R G L T+LIDMY+KCG + A +F+ M ++ W+AMI G
Sbjct: 314 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFG 373
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKP 365
A HG A A ++FS M+ + I P+ +TF+G+L AC+HAGM++ G F M H + I P
Sbjct: 374 FAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITP 433
Query: 366 MRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVR 425
HY M D+L +G KEA I M +P+ ++ +LL A +H +G +
Sbjct: 434 KLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHG---NVELGEKFA 490
Query: 426 RRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRF 485
+ L ++EP + V+++N YA G W +V+ +R + + G+KK+ G S +E+ +H F
Sbjct: 491 QNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEF 550
Query: 486 YSGYDSQVELAGIYQILETLNLHMKVLNF 514
G IY +LE + + ++ F
Sbjct: 551 IIGDKFHPRNREIYGMLEEMEVLLQEAGF 579
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 179/367 (48%), Gaps = 36/367 (9%)
Query: 67 VRFCTLSSS-KNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGI 125
+ FC LS + L YA S+ + + + WN + RG+A S P A+ +++ M G+
Sbjct: 1 LEFCILSPHFEGLPYAISVF-ETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGL 59
Query: 126 KPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACK 185
P +T+PF+LK+CA++ EG+Q+ +V K G + D+Y + +L+ Y R DA K
Sbjct: 60 LPNSYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHK 119
Query: 186 VFDDMCER-------------------------------SVVSWNVIITVCVENLWLGEA 214
VFD R VVSWN +I+ VE EA
Sbjct: 120 VFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEA 179
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M PDE+TM+ V+SA G++ LG+ VH + + G N ++ ALID
Sbjct: 180 LELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDF 239
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG + A LF + +V +W+ +I G +EAL LF M S SPN VT
Sbjct: 240 YSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTM 299
Query: 335 LGVLCACNHAGMVEDGYRYFHEM--EHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
L +L AC H G ++ G R+ H + + G+ ++ D+ ++ G ++ A+ +
Sbjct: 300 LSILHACAHLGAIDIG-RWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNS 358
Query: 393 MPFQPNP 399
M + P
Sbjct: 359 MLHKSLP 365
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 155/459 (33%), Positives = 229/459 (49%), Gaps = 9/459 (1%)
Query: 33 SFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S LK C L QIH+QI + Q +A + L+ + L A IL +
Sbjct: 478 SILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDM--YAKLGKLDTAWDILIRFA 535
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
V + W +I GY + +A+ F M RGI+ E + ACA + L EG
Sbjct: 536 GKDV-VSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQ 594
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ A SG SD+ N LV Y C +A F+ ++WN +++ ++
Sbjct: 595 QIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSG 654
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
EA+ F +M G + + T + A +E N+ GK VH + + G ++
Sbjct: 655 NNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCN 714
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
A+I MYAKCG++ A+ F + N +W+AMI ++HG+ EAL+ F M +S++ P
Sbjct: 715 AIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRP 774
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
N+VT +GVL AC+H G+V+ G YF M +G+ P HY + D+L RAG L A F
Sbjct: 775 NHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDF 834
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
I+ MP +P+ +V R LLSA +H +G LLELEP S V+++N YA
Sbjct: 835 ILEMPIEPDALVWRTLLSACVVHKNME---IGEFAAHHLLELEPEDSATYVLLSNLYAVC 891
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
W+ R+ MK G+KK G SW+E+ SIH FY G
Sbjct: 892 RKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVG 930
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 174/422 (41%), Gaps = 40/422 (9%)
Query: 35 LKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFC----TLSSSKNLTYARSILCNYVN 90
L C + ++ ++Q+ GL+ D+ L LV C TL S + L + L N
Sbjct: 347 LSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASN 406
Query: 91 DSVP----------------------------IPWNNLIRGYAWSDRPREAVWVFIDMKR 122
D + + WN ++ Y D R + +F M+
Sbjct: 407 DKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQI 466
Query: 123 RGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRD 182
I P ++TYP +LK C + L G Q+ + + K+ + Y + L+ Y +
Sbjct: 467 EEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDT 526
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
A + + VVSW +I + + +A+ F +M D G DE + +SAC
Sbjct: 527 AWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAG 586
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
L L G+ +H Q G + AL+ +Y+KCG + A L F + E + W+A+
Sbjct: 587 LQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNAL 646
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
+ G Q G EEAL +F+ M I N TF + A + ++ G + H + G
Sbjct: 647 VSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQG-KQVHAVITKTG 705
Query: 363 IKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGN 422
+ + + A+ G + +A + + + N + A+++A S H G G+
Sbjct: 706 YDSETEVCNAIISMYAKCGSISDAKKQFLELSMK-NEVSWNAMINAYSKH------GFGS 758
Query: 423 EV 424
E
Sbjct: 759 EA 760
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 160/351 (45%), Gaps = 14/351 (3%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN-YVNDSVPIPWNNLIRGY 104
QIHA+I GL + L+ S + + AR + Y+ D W +I G
Sbjct: 191 QIHARIIYQGLGKSTIVCNPLIDL--YSRNGFVDRARRVFDGLYLKDHSS--WVAMISGL 246
Query: 105 AWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDV 164
+ ++ EA+ +F DM GI PT + + VL AC +I L G Q+ V K G SD
Sbjct: 247 SKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT 306
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL 224
Y N LV Y A +F +M +R V++N +I + + +A+ F +M+
Sbjct: 307 YVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLD 366
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCA 284
G EPD T+ ++ AC+ G L G+ +H + G N ++ AL+++YAKC + A
Sbjct: 367 GLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETA 426
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA 344
F E NV W+ M++ + +F M+ I PN T+ +L C
Sbjct: 427 LNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL 486
Query: 345 GMVEDGYRYFHEMEHVHGIK-PMRIHYH---TMADILARAGHLKEAYTFIM 391
G +E G E H IK +++ + + D+ A+ G L A+ ++
Sbjct: 487 GDLELG-----EQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILI 532
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 144/306 (47%), Gaps = 4/306 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
++H+QI G N+A + ++L+ F +L A + + + + WN +I+ A
Sbjct: 89 KLHSQILKLGFDNNACLSEKLLDFYLFKG--DLDGALKVF-DEMPERTIFTWNKMIKELA 145
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS-GLNEGMQVQANVTKSGLDSDV 164
+ +F M + P E T+ VL+AC S + Q+ A + GL
Sbjct: 146 SRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKST 205
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL 224
N L+ Y A +VFD + + SW +I+ +N EA+ F M L
Sbjct: 206 IVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVL 265
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCA 284
G P VLSAC ++ +L +G+ +H +++ G + + AL+ +Y G++ A
Sbjct: 266 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISA 325
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA 344
+FS M + + T++ +I GL+Q GY E+A+ELF M+ + P+ T ++ AC+
Sbjct: 326 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSD 385
Query: 345 GMVEDG 350
G + G
Sbjct: 386 GTLFSG 391
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 149/323 (46%), Gaps = 37/323 (11%)
Query: 124 GIKPTEFTYPFVLKACAEISG-LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRD 182
GI+P T ++L+ C + +G L+EG ++ + + K G D++ + L+ FY
Sbjct: 62 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDG 121
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
A KVFD+M ER++ +WN +I G+ F +M + P+E T VL AC
Sbjct: 122 ALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRG 181
Query: 243 LGNLSLG--KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
G+++ + +H ++I +G + + LID+Y++ G V AR +F + + +W
Sbjct: 182 -GSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWV 240
Query: 301 AMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR-------- 352
AMI GL+++ EA+ LF +M I P F VL AC +E G +
Sbjct: 241 AMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 300
Query: 353 ---------------YFH-----EMEHVHGIKPMR--IHYHTMADILARAGHLKEAYTFI 390
YFH EH+ R + Y+T+ + L++ G+ ++A
Sbjct: 301 GFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 360
Query: 391 MNMP---FQPNPIVLRALLSASS 410
M +P+ L +L+ A S
Sbjct: 361 KRMQLDGLEPDSNTLASLVVACS 383
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 1/167 (0%)
Query: 221 MKDLGFEPDETTMLVVLSACTEL-GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+++ G P+ T+ +L C + G+L G+ +H Q+++ G N L L+D Y G
Sbjct: 58 VENCGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKG 117
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
+ A +F M E ++TW+ MI LA + + LF M N +++PN TF GVL
Sbjct: 118 DLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLE 177
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
AC + D H G+ I + + D+ +R G + A
Sbjct: 178 ACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRA 224
>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 651
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 161/454 (35%), Positives = 236/454 (51%), Gaps = 8/454 (1%)
Query: 55 GLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP--IPWNNLIRGYAWSDRPRE 112
G+ D + L+ S NL A ++ + +N + + WN++I YA ++ +
Sbjct: 184 GVHMDVSVANTLI--AAYSKCGNLCSAETLF-DEINSGLRSVVSWNSMIAAYANFEKHVK 240
Query: 113 AVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVR 172
AV + M G P T +L +C + L G+ V ++ K G DSDV N L+
Sbjct: 241 AVNCYKGMLDGGFSPDISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLIC 300
Query: 173 FYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETT 232
Y C A +F+ M +++ VSW V+I+ E ++ EA+ F M+ G +PD T
Sbjct: 301 MYSKCGDVHSARFLFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVT 360
Query: 233 MLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME 292
+L ++S C + G L LGKW+ I G N + ALIDMYAKCG A+ LF M
Sbjct: 361 VLALISGCGQTGALELGKWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMA 420
Query: 293 EINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR 352
V +W+ MI A +G ++ALELF M + PN++TFL VL AC H G+VE G
Sbjct: 421 NRTVVSWTTMITACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVERGLE 480
Query: 353 YFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
F+ M +GI P HY M D+L R GHL+EA I +MPF+P+ + ALLSA +H
Sbjct: 481 CFNMMTQKYGINPGIDHYSCMVDLLGRKGHLREALEIIKSMPFEPDSGIWSALLSACKLH 540
Query: 413 DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKG 472
K + +G V +L ELEP+ + V +AN YA MWE V+ +RR MK + ++K G
Sbjct: 541 -GKME--MGKYVSEQLFELEPQVAVPYVEMANIYASAEMWEGVAAIRRNMKYLQVRKSPG 597
Query: 473 MSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
S +++ G F E IY +L+ L
Sbjct: 598 QSIIQVNGKPTIFTVEDRDHPETLYIYDMLDGLT 631
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 130/278 (46%), Gaps = 13/278 (4%)
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
S WN+ R + A+ +F MK+ GI P T+PFVLKACA++S L +
Sbjct: 16 STLFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQII 75
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
A+V KS S+++ V Y C R DA VF +M R + SWN ++ ++ +L
Sbjct: 76 HAHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFL 135
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
M+ G PD T+L+++ + + +L+ V+ I G ++ + L
Sbjct: 136 DRLSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTL 195
Query: 272 IDMYAKCGAVGCARLLFSRMEEIN-----VWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
I Y+KCG + A LF +EIN V +W++MI A +A+ + M +
Sbjct: 196 IAAYSKCGNLCSAETLF---DEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGG 252
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIK 364
SP+ T L +L +C + G + H HG+K
Sbjct: 253 FSPDISTILNLLSSCMQPKALFHGL-----LVHSHGVK 285
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYF 354
++TW++ L G+A+ AL LF MK S I+PN TF VL AC + +
Sbjct: 17 TLFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNS---- 72
Query: 355 HEMEHVHGIKPM---RIHYHT-MADILARAGHLKEAYTFIMNMPFQ 396
++ H H +K I T D+ + G L++A+ + MP +
Sbjct: 73 -QIIHAHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVR 117
>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 769
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 155/431 (35%), Positives = 231/431 (53%), Gaps = 9/431 (2%)
Query: 78 LTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLK 137
L AR + N + WN +I G A + EAV VF +M+ G P + +L
Sbjct: 318 LDSARRVF-NQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLLC 376
Query: 138 ACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS-VV 196
A + L +GMQ+ + + K G +D+ N+L+ Y C +F+D ++ V
Sbjct: 377 AQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSV 436
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
SWN I+T C+++ E + F M EPD TM +L C E+ +L LG VH
Sbjct: 437 SWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYS 496
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
+ G VL + LIDMYAKCG++ AR +F M+ +V +WS +I+G AQ G+ EEAL
Sbjct: 497 WKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGEEAL 556
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
LF MK+S I PN+VTF+GVL AC+H G+VE+G + + M+ HGI P + H + D+
Sbjct: 557 ILFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHCSCVVDL 616
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGV--GNEVRRRLLELEPR 434
LARAGHL EA FI M +P+ +V + LLSA K Q V + +L+++P
Sbjct: 617 LARAGHLNEAERFIDEMKLEPDVVVWKTLLSA-----CKTQGNVDLAQKAAENILKIDPF 671
Query: 435 GSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVE 494
S V++ + +A G WE + +R MK +KK+ G SW+++ IH F++ E
Sbjct: 672 NSTAHVLLCSMHASSGNWEDAALLRSSMKKHDVKKIPGQSWIDVEDKIHIFFAEDVLHPE 731
Query: 495 LAGIYQILETL 505
IY +L +
Sbjct: 732 RDDIYTVLHNI 742
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 162/324 (50%), Gaps = 7/324 (2%)
Query: 21 NSDLLSKARQCLSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKN 77
NS + R +S + C S + L Q IH I S + D + ++ +
Sbjct: 57 NSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSM--YGKCGS 114
Query: 78 LTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLK 137
L AR + +++ + + + ++I GY+ + + EA+ +++ M + + P +F + ++K
Sbjct: 115 LRDAREVF-DFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIK 173
Query: 138 ACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS 197
ACA + G Q+ A V K S + N L+ Y + DA KVF + + ++S
Sbjct: 174 ACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLIS 233
Query: 198 WNVIITVCVENLWLGEAVGYFVKMKDLG-FEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
W+ II + + EA+ + +M G F P+E L AC+ L G +H
Sbjct: 234 WSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLC 293
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
I+ N G +L DMYA+CG + AR +F+++E + +W+ +I GLA +GYA+EA+
Sbjct: 294 IKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAV 353
Query: 317 ELFSNMKNSSISPNYVTFLGVLCA 340
+FS M+NS P+ ++ +LCA
Sbjct: 354 SVFSEMRNSGFIPDAISLRSLLCA 377
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 151/340 (44%), Gaps = 45/340 (13%)
Query: 111 REAVWVF-IDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNN 169
REA+ F K K TY ++ AC+ L +G ++ ++ S D NN+
Sbjct: 45 REALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNH 104
Query: 170 LVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPD 229
++ YG C RDA +VFD M ER++VS+ +IT +N EA+ ++KM PD
Sbjct: 105 ILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPD 164
Query: 230 ETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFS 289
+ ++ AC G++ LGK +H Q+I+ + + ALI MY + + A +F
Sbjct: 165 QFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFY 224
Query: 290 RMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI-SPNYVTFLGVLCACN------ 342
+ ++ +WS++I G +Q G+ EAL M + + PN F L AC+
Sbjct: 225 GIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPD 284
Query: 343 -----------------------------HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
G ++ R F+++E +P ++ +
Sbjct: 285 YGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIE-----RPDTASWNVI 339
Query: 374 ADILARAGHLKEA---YTFIMNMPFQPNPIVLRALLSASS 410
LA G+ EA ++ + N F P+ I LR+LL A +
Sbjct: 340 IAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLLCAQT 379
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 177/419 (42%), Gaps = 26/419 (6%)
Query: 46 QIHAQI----QVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
Q+HAQ+ S L ++ VRF +S + + Y + I W+++I
Sbjct: 186 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYG-------IPAKDLISWSSII 238
Query: 102 RGYAWSDRPREAVWVFIDMKRRGI-KPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGL 160
G++ EA+ +M G+ P E+ + LKAC+ + + G Q+ K L
Sbjct: 239 AGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLEL 298
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK 220
+ +L Y C A +VF+ + SWNVII N + EAV F +
Sbjct: 299 TGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSE 358
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
M++ GF PD ++ +L A T+ L G +H +I+ G + + + +L+ MY C
Sbjct: 359 MRNSGFIPDAISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSD 418
Query: 281 VGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
+ C LF + + +W+A++ QH E L LF M S P+++T +L
Sbjct: 419 LYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLR 478
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
C ++ G + H G+ + + + D+ A+ G L++A +M
Sbjct: 479 GCVEISSLKLGSQ-VHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGD-- 535
Query: 400 IVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
++S S++ Q G G E E++ G I N VG+ S+V
Sbjct: 536 -----VVSWSTLIVGYAQSGFGEEALILFREMKSSG-----IEPNHVTFVGVLTACSHV 584
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 75/147 (51%)
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
I ++C + + + K+ F+ T + ++ AC+ +L+ G+ +H ++
Sbjct: 35 INSLCRNSFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSN 94
Query: 261 TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS 320
+ L ++ MY KCG++ AR +F M E N+ +++++I G +Q+G EA+ L+
Sbjct: 95 CKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYL 154
Query: 321 NMKNSSISPNYVTFLGVLCACNHAGMV 347
M + + P+ F ++ AC AG V
Sbjct: 155 KMLQADLVPDQFAFGSIIKACACAGDV 181
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/419 (34%), Positives = 220/419 (52%), Gaps = 3/419 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I WN +I GY + EA+ +F M R G + TEFT L ACA + E Q+
Sbjct: 123 ISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQLHTI 182
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K LDS + + Y C +DAC VF++M E++ V+W+ + V+N E
Sbjct: 183 AIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEV 242
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F + G + E T+ +LS C L + G VH +++ G N + T+L+D+
Sbjct: 243 LCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDV 302
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG + + +F+ MEE NV W+AMI ++H ++ EA+ LF M+ I PN VT+
Sbjct: 303 YAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTY 362
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
L +L AC+H G+VE+G YF+ + +P +HY M D+L R+G EA+ + MP
Sbjct: 363 LSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMP 422
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
F+P + +LL +S IH + E +L LEP N V+++N YA G WE
Sbjct: 423 FEPTASMWGSLLGSSRIHKNIRLARIAAE---QLFRLEPENGGNHVLLSNVYAASGNWEN 479
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLN 513
V R+++++ G KK G SW+E G IH F +G + +Y LE + M+ ++
Sbjct: 480 VVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVYNKLEEIYHEMRKIS 538
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 132/288 (45%), Gaps = 2/288 (0%)
Query: 130 FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD 189
FT +L+ CA+ L G GL +D T N L+ Y C + A +VFD
Sbjct: 57 FTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDA 116
Query: 190 MCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
M RS++SWN +I N EA+ F +M G + E T+ L AC +
Sbjct: 117 MSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIEC 176
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
K +H I+ + +GTA +D+YAKC + A +F M E TWS++ G Q+
Sbjct: 177 KQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQN 236
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIH 369
G EE L LF + + + T +L C ++ +G + H + HG
Sbjct: 237 GLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQ-VHAVIVKHGFHRNLFV 295
Query: 370 YHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQ 417
++ D+ A+ G ++++Y +M + N ++ A++++ S H ++
Sbjct: 296 ATSLVDVYAKCGQIEKSYEVFADME-EKNVVLWNAMIASFSRHAHSWE 342
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 108/217 (49%), Gaps = 11/217 (5%)
Query: 86 CNYVNDS----------VPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFV 135
CN + D+ + W++L G+ + E + +F +R G++ TEFT +
Sbjct: 205 CNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSI 264
Query: 136 LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSV 195
L CA ++ + EG QV A + K G +++ +LV Y C + + +VF DM E++V
Sbjct: 265 LSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNV 324
Query: 196 VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK-WVHL 254
V WN +I + EA+ F KM+ +G P+E T L +LSAC+ G + G+ + +L
Sbjct: 325 VLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNL 384
Query: 255 QLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM 291
L +R N + ++D+ + G A L +M
Sbjct: 385 LLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKM 421
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 8/196 (4%)
Query: 229 DETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLF 288
D T+ +L C + +L +GK H I G V + LI++Y KCG CAR +F
Sbjct: 55 DVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVF 114
Query: 289 SRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVE 348
M ++ +W+ MI G + EAL+LFS M T LCAC +
Sbjct: 115 DAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAII 174
Query: 349 DGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
+ + H + + D+ A+ +K+A NMP + + ++
Sbjct: 175 EC-KQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTS-------VTW 226
Query: 409 SSIHDAKYQDGVGNEV 424
SS+ Q+G+ EV
Sbjct: 227 SSLFAGFVQNGLHEEV 242
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 160/494 (32%), Positives = 236/494 (47%), Gaps = 41/494 (8%)
Query: 47 IHAQIQVSGLQNDAQILKEL-VRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
IHA + G++++A L V + C P+ WN LI G+
Sbjct: 78 IHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLATGGGAPVMWNALISGHN 137
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
S R + F+DM R T TY VL AC + L GMQV V +SG+ D
Sbjct: 138 RSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQR 197
Query: 166 TNNNLVRFYGSC----------------------------------RRKRDACKVFDDMC 191
N LV Y C R RD +FD M
Sbjct: 198 VENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARD---LFDHMP 254
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
ER ++W +I V+ +A+ F M+ DE TM+ V++AC +LG L G+W
Sbjct: 255 ERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEW 314
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+ + G ++ +G ALIDMY+KCG++ A +F M + +TW+A+ILGLA +G
Sbjct: 315 ARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGR 374
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
EEA+++F M + +P+ VTF+GVL AC HAG+V+ G +F M + I P +HY
Sbjct: 375 GEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYG 434
Query: 372 TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLEL 431
+ D+L RAG LKEA I MP +PN + LL++ ++ +G RLLEL
Sbjct: 435 CLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYG---NSEIGELAAERLLEL 491
Query: 432 EPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDS 491
+P S ++++N YA+ W+ V +R+ + G+KK G S +E+ G IH F + S
Sbjct: 492 DPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMNGIIHEFVAADRS 551
Query: 492 QVELAGIYQILETL 505
IY LE +
Sbjct: 552 HPMNKEIYSKLENV 565
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 150/358 (41%), Gaps = 46/358 (12%)
Query: 76 KNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFV 135
+ L+ ARS+L D +P EAV ++ M G +P +T+P +
Sbjct: 3 RALSRARSLL-----DGIPHRRGRAASSSVSGHGAEEAVAGYVRMLAGGARPDAYTFPSL 57
Query: 136 LK-----ACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
LK A ++ + G + A+V K G++S+ + ++L+ Y + A V +
Sbjct: 58 LKAAAAARGAAVAAASVGGAIHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAA 117
Query: 191 C----ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNL 246
C + V WN +I+ + + FV M T + VLSAC + +L
Sbjct: 118 CLATGGGAPVMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDL 177
Query: 247 SLGKWVHLQLIERGTVLNCQLGTALIDMYAKC---------------------------- 278
LG VH +++E G + + ++ AL+DMYA+C
Sbjct: 178 LLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGL 237
Query: 279 ---GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFL 335
G V AR LF M E + W+AMI G Q G +ALE F M+ + + T +
Sbjct: 238 VRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMV 297
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
V+ AC G +E G M + GIK + + D+ ++ G ++ A +M
Sbjct: 298 SVVTACAQLGALETGEWARIYMGRL-GIKMDVFVGNALIDMYSKCGSIERALDVFKDM 354
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/411 (36%), Positives = 219/411 (53%), Gaps = 6/411 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W ++++ Y R EA+ VF DM G+ P EF VL AC I GL G Q+ +
Sbjct: 280 VSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSI-GL--GRQLHCS 336
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K L +D+ +N L+ YG + + + + +VSW I+ +N + +A
Sbjct: 337 AIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKA 396
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ +M GF P+ VLS+C ++ +L G H ++ G G ALI+M
Sbjct: 397 IALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINM 456
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG +G ARL F M +V +W+++I G AQHG A +ALE+FS M+++ I P+ TF
Sbjct: 457 YSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTF 516
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
LGVL CNH+GMVE+G +F M + P HY M D+L R G EA I +MP
Sbjct: 517 LGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMP 576
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
F+P+ ++ + LL++ +H + D +G RL+EL R S + V+++N YA G WE
Sbjct: 577 FEPDALIWKTLLASCKLH--RNLD-IGKLAADRLMELSDRDSASYVLMSNIYAMHGEWED 633
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
VRR M G+KK G SW+E+ +H F S S IYQ+L L
Sbjct: 634 ARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGEL 684
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 174/385 (45%), Gaps = 20/385 (5%)
Query: 54 SGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREA 113
+G ++ E R L S L A + +V + W +++ GY + RP A
Sbjct: 40 NGCAESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNV-VAWTSVMSGYTRNGRPEAA 98
Query: 114 VWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRF 173
+ +F DM G+ P +F L ACA++ L G QV + ++G D + + L+
Sbjct: 99 LAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEM 158
Query: 174 YGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTM 233
Y C A +VFD M VV + +I+ N A ++M G +P+E TM
Sbjct: 159 YSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTM 218
Query: 234 LVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL--GTALIDMYAKCGAVGCARLLFSRM 291
+L+AC + LG+ +H LI++ + + + TALID Y++ G A+ +F +
Sbjct: 219 TTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSL 274
Query: 292 EEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGY 351
NV +W +M+ + G EEAL++F +M + + PN VL AC G+
Sbjct: 275 HCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL----G 330
Query: 352 RYFHEMEHVHG-IKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASS 410
R H H I +R+ + + + R G L E ++N P+ L+S ++
Sbjct: 331 RQLHCSAIKHDLITDIRVS-NALLSMYGRTG-LVEELEAMLNKIENPD------LVSWTT 382
Query: 411 IHDAKYQDGVGNEVRRRLLELEPRG 435
A +Q+G G + L ++ G
Sbjct: 383 AISANFQNGFGEKAIALLCQMHSEG 407
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 112/266 (42%), Gaps = 5/266 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+H L D ++ L+ ++ L + N + + + W I
Sbjct: 332 QLHCSAIKHDLITDIRVSNALL---SMYGRTGLVEELEAMLNKIENPDLVSWTTAISANF 388
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ +A+ + M G P + + VL +CA+++ L++GMQ K G DS++
Sbjct: 389 QNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEIC 448
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
T N L+ Y C + A FD M V SWN +I ++ +A+ F KM+ G
Sbjct: 449 TGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNG 508
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA-LIDMYAKCGAVGCA 284
+PD++T L VL C G + G+ +I++ + A +IDM + G A
Sbjct: 509 IKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEA 568
Query: 285 RLLFSRME-EINVWTWSAMILGLAQH 309
+ + M E + W ++ H
Sbjct: 569 LRMINDMPFEPDALIWKTLLASCKLH 594
>gi|326511827|dbj|BAJ92058.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 581
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/468 (32%), Positives = 242/468 (51%), Gaps = 17/468 (3%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP------IPWNN 99
Q+HA GL +D +L L+ SS + ARS+L DS P + WN
Sbjct: 114 QLHALSVKLGLSSDTFVLNTLINM--YSSCSYPSTARSVL-----DSAPKGASDTVSWNT 166
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
+I GY + P +A+ F M + + + T L ACA + G A + +G
Sbjct: 167 IIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNG 226
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
+ + Y ++L+ Y C + DA ++FD M +R+ V W +I+ + EA+ F
Sbjct: 227 FEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFR 286
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
M+ G + D+ T+ V+S+C ++G L LG++VH G + + +LIDMY+KCG
Sbjct: 287 DMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCG 346
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN-SSISPNYVTFLGVL 338
+ A +F M + + ++W+ +I+G A +G + EAL+LF+ M+ + PN +TFLGVL
Sbjct: 347 DIKKAYDIFCGMVKRDNFSWTVIIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVL 406
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
+C+H G+VE GYR+FH M ++GI P HY M D+L RA L EA FI MP P+
Sbjct: 407 TSCSHGGLVEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPD 466
Query: 399 PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
++ R+LL A + G+ V R+ LEP V+++ YA W + V
Sbjct: 467 AVMWRSLLFACRTCG---EVGLAEYVAERIQVLEPNKCGGDVLLSTVYATTSRWVDANKV 523
Query: 459 RRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
R + + K G S++E+ G +H F++G +S E IY L +N
Sbjct: 524 RTGIYSGRKTKQPGCSFIEVDGCVHEFFAGDESHFETEAIYSTLLGIN 571
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 151/309 (48%), Gaps = 5/309 (1%)
Query: 93 VPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTE-FTYPFVLKACAEISGLNEGMQV 151
VP+ ++++R + P ++ ++R G P + ++ L A + + G Q+
Sbjct: 57 VPL-LHSVLRSLSSGPVPSLSLSFLSLLRRSGYMPIDNYSLSAALSTAARMPSVVVGAQL 115
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS--VVSWNVIITVCVENL 209
A K GL SD + N L+ Y SC A V D + + VSWN II +
Sbjct: 116 HALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVLDSAPKGASDTVSWNTIIAGYIHAG 175
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+A+ F +M D+ T+L L AC + +GK H L+ G +NC +G+
Sbjct: 176 LPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEINCYMGS 235
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
+LI MYAKCG V AR +F M + N W++MI G Q G ++EA++LF +M+ + +
Sbjct: 236 SLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQIAGVKV 295
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
+ T V+ +C G ++ G RY H +HG+ +++ D+ ++ G +K+AY
Sbjct: 296 DDATISTVVSSCGQMGALDLG-RYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYDI 354
Query: 390 IMNMPFQPN 398
M + N
Sbjct: 355 FCGMVKRDN 363
>gi|357441891|ref|XP_003591223.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480271|gb|AES61474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 606
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 158/486 (32%), Positives = 247/486 (50%), Gaps = 17/486 (3%)
Query: 29 RQCLSFLKLCCSK-KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
+ C S L C K H I Q S + D ++ C + L +
Sbjct: 115 KACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNARLVFED----- 169
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+ + W LI GY + VF M + + F++ + ACA I N
Sbjct: 170 -IGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSSNL 228
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G QV A V G +S++ N ++ Y CR +A ++F +M ++ ++WN +I E
Sbjct: 229 GKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLI-AGFE 287
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
L E++ F +M GF P+ T V++AC L L G+ +H +I RG N +L
Sbjct: 288 TLDSYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNLEL 347
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
ALIDMYAKCG V + +FS M N+ +W++M++G HG+ +EA++LF+ M S I
Sbjct: 348 SNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGI 407
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
P+ + F+ VL AC+HAG+V++G RYF M + + P R Y + D+L+RAG +KEAY
Sbjct: 408 KPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLLSRAGRVKEAY 467
Query: 388 TFIMNMPFQPNPIVLRALLSASSIHDAKY-QDGVGNEVRRRLLELEPRGSQNLVIVANKY 446
I NMPF+P+ + ALL A KY Q + ++LE++P + V+++N
Sbjct: 468 ELIENMPFKPDESIWVALLGACK----KYKQPSIQKLAALKVLEMKPNKAGTYVLLSNFS 523
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG--YDSQVELAGIYQILET 504
A G W +++R+ M++ KK G SW+EL + F G +DS + + ++LE
Sbjct: 524 AAEGNWADFASLRKLMRSTKSKKEVGRSWIELKNQVCSFIVGDIFDSSNK--EVCEVLEL 581
Query: 505 LNLHMK 510
L HMK
Sbjct: 582 LIRHMK 587
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 154/359 (42%), Gaps = 52/359 (14%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I W ++I GY + A VF +M R G+KP FT VLKAC + L G V
Sbjct: 73 IAWTSMITGYTSCNHHSRAWNVFTNMLRDGVKPNAFTVSAVLKACKSLKALLCGKLVHGL 132
Query: 155 VTKSGLD-SDVYTNNNLVRFYGSCRRKRDACK-VFDDMCERSVVSWNVIITVCVENLWLG 212
K G S +Y +N L+ Y +C D + VF+D+ ++ VSW +IT
Sbjct: 133 AIKIGTQGSSIYVDNALMDMYATCCDSMDNARLVFEDIGTKNAVSWTTLITGYTHRR--- 189
Query: 213 EAVGYFVKMKDLGFEPDETTML---VVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+A G + + E E + + +SAC +G+ +LGK VH +I G N +
Sbjct: 190 DAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSSNLGKQVHAAVINHGFESNLPVMN 249
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
A++DMY +C A+ LF M + + TW+ +I G + E+L +FS M + SP
Sbjct: 250 AILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGFETLD-SYESLCIFSQMVSEGFSP 308
Query: 330 NYVTFLGVLCACN-----------HAGM------------------------VEDGYRYF 354
N TF V+ AC H G+ V D ++ F
Sbjct: 309 NCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIF 368
Query: 355 HEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM---PFQPNPIVLRALLSASS 410
M H + + + +M GH KEA M +P+ IV A+LSA S
Sbjct: 369 SGMRHTN-----LVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACS 422
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 105/250 (42%), Gaps = 8/250 (3%)
Query: 169 NLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEP 228
+L++ Y +A +FD+M R V++W +IT A F M G +P
Sbjct: 46 DLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVKP 105
Query: 229 DETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNCQLGTALIDMYAK-CGAVGCARL 286
+ T+ VL AC L L GK VH I+ GT + + AL+DMYA C ++ ARL
Sbjct: 106 NAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNARL 165
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSN--MKNSSISPNYVTFLGVLCACNHA 344
+F + N +W+ +I G A L +F M+ +SP +F + AC
Sbjct: 166 VFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSP--FSFSIAVSACASI 223
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRA 404
G G + H HG + + + D+ R EA M Q + I
Sbjct: 224 GSSNLG-KQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMT-QKDTITWNT 281
Query: 405 LLSASSIHDA 414
L++ D+
Sbjct: 282 LIAGFETLDS 291
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 254 LQLIERGTVLNCQ----LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
L+ I+ T N + L T LI Y G+ A LF M +V W++MI G
Sbjct: 26 LRCIQNDTPFNPKDLTGLTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSC 85
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
+ A +F+NM + PN T VL AC
Sbjct: 86 NHHSRAWNVFTNMLRDGVKPNAFTVSAVLKAC 117
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/430 (34%), Positives = 239/430 (55%), Gaps = 7/430 (1%)
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
+L+YA+ + + + WN LI GYA S PR ++ + MK G+ P FT +L
Sbjct: 429 SLSYAQRVF-HGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLL 487
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
AC+++ L G +V + ++ L+ D++ +++ Y C +FD M + S+V
Sbjct: 488 SACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLV 547
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
SWN +IT ++N + A+G F +M G +P +M+ V AC+ L +L LG+ H
Sbjct: 548 SWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYA 607
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
++ N + ++IDMYAK GA+ + +F+ ++E + +W+AMI+G HG A+EA+
Sbjct: 608 LKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAI 667
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
+LF M+ + +P+ +TFLGVL ACNH+G++ +G RY +M+ G+KP HY + D+
Sbjct: 668 KLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDM 727
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGS 436
L RAG L A M +P+ + +LLS IH +G +V +L LEP
Sbjct: 728 LGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLE---MGEKVAAKLFVLEPEKP 784
Query: 437 QNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG---YDSQV 493
+N V+++N YA +G W+ V VR+ MK + L+K G SW+EL G + F G D
Sbjct: 785 ENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFE 844
Query: 494 ELAGIYQILE 503
E+ ++ ILE
Sbjct: 845 EIKSLWSILE 854
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 145/311 (46%), Gaps = 32/311 (10%)
Query: 51 IQVSGLQNDAQI---LKELVRFCTLSSSKNLTYARSI----LCNYVNDSVP--------- 94
+Q SG + D ++ + LV T S ++ R I +C +DS
Sbjct: 91 LQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKN 150
Query: 95 -IPWNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQ 152
WN +I Y+ ++ E + +FI M + + P FT+P V+KACA IS + G+ V
Sbjct: 151 LFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVH 210
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
V K+GL D++ N LV FYG+ DA K+FD M ER++VSWN +I V +N
Sbjct: 211 GLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDN---- 266
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
D F PD T++ VL C + +GK VH ++ + AL+
Sbjct: 267 --------GDDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALM 318
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS--ISPN 330
DMY+K G + ++++F NV +W+ M+ G + G +L M S + +
Sbjct: 319 DMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKAD 378
Query: 331 YVTFLGVLCAC 341
VT L + C
Sbjct: 379 EVTILNAVPVC 389
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 111/253 (43%), Gaps = 20/253 (7%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN++IR +SD + ++ P T VL CA + G V
Sbjct: 254 VSWNSMIR--VFSDNGDDGAFM----------PDVATVVTVLPVCAREREIGVGKGVHGW 301
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K LD ++ NN L+ Y D+ +F ++VVSWN ++ G+
Sbjct: 302 AVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAE---GDI 358
Query: 215 VGYFVKMKDL-----GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
G F ++ + + DE T+L + C + L K +H +++ V + L
Sbjct: 359 HGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLAN 418
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
A + YAKCG++ A+ +F + + +W+A+I G AQ +L+ MKNS + P
Sbjct: 419 AFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLP 478
Query: 330 NYVTFLGVLCACN 342
+ T +L AC+
Sbjct: 479 DNFTVCSLLSACS 491
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 14/210 (6%)
Query: 134 FVLKACAEISGLNEGMQVQANVTKSG-LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
+L+A + + G ++ V+ S L SD ++ Y C D+ FD +
Sbjct: 89 LLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRS 148
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKM-KDLGFEPDETTMLVVLSACTELGNLSLGKW 251
+++ WN +I+ N E + F+KM PD T V+ AC + ++ +G
Sbjct: 149 KNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLA 208
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
VH +++ G V + +G AL+ Y G V A LF M E N+ +W++MI + +G
Sbjct: 209 VHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNG- 267
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCAC 341
+ + P+ T + VL C
Sbjct: 268 -----------DDGAFMPDVATVVTVLPVC 286
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
Query: 235 VVLSACTELGNLSLGKWVHLQLIERGTVLNCQ--LGTALIDMYAKCGAVGCARLLFSRME 292
++L A + ++ +G+ +H L+ T L L T +I MYA CG+ +R F +
Sbjct: 89 LLLQASGKRKDIEMGRKIH-HLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALR 147
Query: 293 EINVWTWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGMVEDG 350
N++ W+A+I +++ E LE+F M + + P+ TF V+ AC AG+ + G
Sbjct: 148 SKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKAC--AGISDVG 204
>gi|413941558|gb|AFW74207.1| hypothetical protein ZEAMMB73_978994 [Zea mays]
Length = 580
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 161/467 (34%), Positives = 243/467 (52%), Gaps = 15/467 (3%)
Query: 44 LYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP----WNN 99
L Q HA++ VSG + ++ +L + + + + S P P + +
Sbjct: 23 LKQAHARLVVSGHGDSLPLITKLATLAVAAGAASYA-------RLLAASHPAPDSFLFCS 75
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
L R A P A+ + + + + F + V KACA++S + GM + A+ G
Sbjct: 76 LTRATARRGLPAAALAFYRCLLAAALPFSSFAFTSVAKACADLSAIRAGMGIHAHAVLLG 135
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
L S+ + +LV Y C + A K+FD + ++SVV+WN +I+ +N G A+ +
Sbjct: 136 LGSNRFVQTSLVVLYSKCGQLDVARKLFDAIRDKSVVAWNAMISGYEQNGLAGRAIEVYR 195
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+M+ G PD T + LSAC + G L LG+ V ++ +N LG AL++MYA+CG
Sbjct: 196 EMQMAGEAPDSATFVATLSACAQAGALDLGRQVDKLIVSERMEMNVVLGAALVNMYARCG 255
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
V AR F+ ++E NV TW++MI G HG+ EA++LF+ M+ PN VTF+ VL
Sbjct: 256 LVNKAREWFNMLQERNVVTWTSMIAGYGMHGHGGEAVKLFNLMRQQGPPPNDVTFVAVLS 315
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN-MPFQPN 398
AC HAG+V +G F M+ V+G+ P HY +M D+ RAG L +A FI + +P +P
Sbjct: 316 ACAHAGLVSEGRDAFASMKSVYGLVPRVEHYCSMVDMYGRAGLLDDAMRFIHDSIPGEPG 375
Query: 399 PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
P V A+L A +H +G EV RL+ LEP + V+++N YA G V V
Sbjct: 376 PEVWTAMLGACKMHK---DFNLGVEVAERLIALEPESPSHRVLLSNLYALSGKMNHVEKV 432
Query: 459 RRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
R M LKK G S +E+ G H F G S + + IYQ LE L
Sbjct: 433 RDTMIKRRLKKPIGYSLIEIAGVAHLFRMGEKSHPKTSEIYQYLEKL 479
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 173/514 (33%), Positives = 264/514 (51%), Gaps = 41/514 (7%)
Query: 15 PKPSNCNSDLLSKARQCLSFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCT 71
PKP DL + R S L+LC K + +IH+ IQ + ++ D + +LV
Sbjct: 95 PKP-----DL--ELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYV 147
Query: 72 LSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFT 131
+ +L R I N+ V + WN L+ GYA RE++ +F M+ GI+ E
Sbjct: 148 --TCGDLREGRRIFDKVANEKVFL-WNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESA 204
Query: 132 YPF--------VLKACAEISGL------NEGMQVQANVTKSGLDSDVYT--------NNN 169
V+ + ISG +G+ + + G+++D+ T NN
Sbjct: 205 RKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNC 264
Query: 170 LVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPD 229
L+ Y A +VF+ M ERSVVSW +I +V F +M+ P+
Sbjct: 265 LLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPN 324
Query: 230 ETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFS 289
TM +L AC L L G+ +H ++ G L+ + AL+DMY KCGA+G ARLLF
Sbjct: 325 SITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFD 384
Query: 290 RMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVED 349
+ E ++ +W+ MI G HGY EA+ F+ M+NS I P+ V+F+ +L AC+H+G++++
Sbjct: 385 MIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDE 444
Query: 350 GYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSAS 409
G+ +F+ M + I+P HY + D+LARAG+L +AY FI MP +P+ + ALL
Sbjct: 445 GWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGC 504
Query: 410 SI-HDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLK 468
I HD K + V V ELEP + V++AN YAE WE+V +R + GL+
Sbjct: 505 RIYHDVKLAEKVAEHV----FELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLR 560
Query: 469 KMKGMSWVELGGSIHRFYSGYDSQVELAGIYQIL 502
K G SW+E+ G +H F +G DS LA ++L
Sbjct: 561 KNPGCSWIEIKGKVHIFVTG-DSSHPLANKIELL 593
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/333 (40%), Positives = 201/333 (60%), Gaps = 4/333 (1%)
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
A KVF+ M E+ +V+WN +I N EA+ + +M G EPD TM+ +LSAC E
Sbjct: 60 AYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAE 119
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSA 301
L L LG+ H+ +++ G N AL+D+YAKCG + AR +F M E NV +W++
Sbjct: 120 LATLVLGRRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVVSWTS 179
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
+I+GLA +G+ +EALE F +M+ + P+ +TF+GVL AC+H G+V +G+ YF M+ +
Sbjct: 180 LIVGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVLYACSHCGIVNEGFEYFKRMKEQY 239
Query: 362 GIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVG 421
I P HY M D+L RAG LKEAY +I +MP QPN ++ R LL A +IH G+G
Sbjct: 240 DIVPRIEHYGCMVDLLGRAGLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHG---HLGLG 296
Query: 422 NEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGS 481
R RLL+LEP+ S + V+++N YA W V VRR M + G++K G S VELG
Sbjct: 297 AFARARLLQLEPKDSGDYVLLSNLYASEQRWSDVHEVRRTMLSEGVRKTPGYSLVELGNH 356
Query: 482 IHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+H F G + + IY++L + + +K+ +
Sbjct: 357 VHEFVMGDRTHPQSEAIYKMLVEMAMKLKLAGY 389
>gi|224059226|ref|XP_002299777.1| predicted protein [Populus trichocarpa]
gi|222847035|gb|EEE84582.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 230/430 (53%), Gaps = 39/430 (9%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEI--SGLNEGMQVQANVTKSGLDS-DVYTNNNLVRFYGS 176
M+ I P T+ +L CA++ G + G + A K GLD+ ++ LV Y
Sbjct: 1 MRLLEIDPNHVTFITLLSGCADLPSQGNSLGPLLHAYTRKLGLDTCNLMVGTALVDMYAK 60
Query: 177 CR-------------------------------RKRDACKVFDDMCERSVVSWNVIITVC 205
C + R+A +VFD+M ER V+SW V+I
Sbjct: 61 CGHVELSRLCFDELKVKNSFSWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGF 120
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
V+ EA+ +F KM+ EPD T++ VLSAC LG L LG WVH +++G N
Sbjct: 121 VKMGLFEEALEWFRKMQVSKVEPDRVTIVTVLSACANLGALGLGLWVHRYALKKGLRDNV 180
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
++ +LID+Y++CGA+ AR +F +M E + +W+++I GLA +G+ EEALE F M+
Sbjct: 181 KICNSLIDLYSRCGAIELARQVFEKMGERTLVSWNSIIGGLAANGFTEEALEHFDLMQKQ 240
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
PN V+F G L AC+H G+V++G +YF ME VH I P HY + D+ +RAG L++
Sbjct: 241 GFKPNDVSFTGALTACSHTGLVDEGLKYFDIMERVHKISPRIEHYGCIVDLYSRAGRLED 300
Query: 386 AYTFIMNMPFQPNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
A + + NMP +PN +V+ +LL+A D + + + N L+ L+P N V+++N
Sbjct: 301 AMSVVQNMPMKPNEVVVGSLLAACRTRGDVELAERLMN----YLVHLDPGADSNYVLLSN 356
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILET 504
YA VG W+ R MK +G++K G S +E+G IH F +G S + IY +LE
Sbjct: 357 IYAAVGRWDGACKQRMTMKALGIQKKPGFSSIEIGCDIHEFVAGDKSHDKAEDIYSMLEL 416
Query: 505 LNLHMKVLNF 514
L+ + +
Sbjct: 417 LSFDQALCGY 426
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 122/276 (44%), Gaps = 37/276 (13%)
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D +P I W LI G+ EA+ F M+ ++P T VL ACA +
Sbjct: 101 VFDEMPERGVISWTVLINGFVKMGLFEEALEWFRKMQVSKVEPDRVTIVTVLSACANLGA 160
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L G+ V K GL +V N+L+ Y C A +VF+ M ER++VSWN II
Sbjct: 161 LGLGLWVHRYALKKGLRDNVKICNSLIDLYSRCGAIELARQVFEKMGERTLVSWNSIIGG 220
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
N + EA+ +F M+ GF+P++ + L+AC+ G + G + ++ER ++
Sbjct: 221 LAANGFTEEALEHFDLMQKQGFKPNDVSFTGALTACSHTGLVDEG-LKYFDIMERVHKIS 279
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+ I+ Y GC L+SR G E+A+ + NM
Sbjct: 280 PR-----IEHY------GCIVDLYSRA------------------GRLEDAMSVVQNM-- 308
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHV 360
+ PN V +L AC G VE R + + H+
Sbjct: 309 -PMKPNEVVVGSLLAACRTRGDVELAERLMNYLVHL 343
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 164/565 (29%), Positives = 280/565 (49%), Gaps = 74/565 (13%)
Query: 14 PPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLS 73
P +P +C S + L+ +K C + L+ + A + + D ++ + F + S
Sbjct: 126 PLQPPSCPS----FKQTLLNRIKNCSTINELHGLCASMIKTNAIQDCFLVHQ---FISAS 178
Query: 74 SSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTY 132
+ N + + + +N +I+G+ + P A+ ++ M + + PT +T+
Sbjct: 179 FALNSVHYPVFAFTQMENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTF 238
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGS--------------CR 178
++KAC + + G V ++ K G +S ++ LV FY C
Sbjct: 239 SSLVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCE 298
Query: 179 RK-----------------RDACKVFDDMCERS--------------------------- 194
R A K+F++M ER+
Sbjct: 299 RDAFAWTAMVSALARVGDMDSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQM 358
Query: 195 ----VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
++SW +IT +N +A+ + +M+ G PDE TM V SAC +G L LGK
Sbjct: 359 PTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGK 418
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
+H ++ +G L+ +G+AL+DMYAKCG++ + L+F ++ + N++ W+A+I GLA HG
Sbjct: 419 EIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHG 478
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
YAE+AL +F+ M+ I PN VTF+ +L AC HAG+V++G F M + I+P HY
Sbjct: 479 YAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHY 538
Query: 371 HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLE 430
M D+L+++G+L EA I +M F+PN I+ ALL+ +H + + +L+
Sbjct: 539 GCMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHG---NCEIAEDAVEQLMI 595
Query: 431 LEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGL-KKMKGMSWVELGGSIHRFYSGY 489
LEP S + ++ + YAE W +V+++R MK G+ KK G SW+EL G+IH+F +
Sbjct: 596 LEPMNSGHYNLLVSMYAEEKDWMEVAHIRSMMKEKGVEKKYPGSSWIELEGTIHQFSASA 655
Query: 490 DSQVELAGIYQILETLNLHMKVLNF 514
DS + IY +L L+ +K+ +
Sbjct: 656 DSHPDSDKIYFVLTELDGQLKLAGY 680
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 181/545 (33%), Positives = 264/545 (48%), Gaps = 82/545 (15%)
Query: 42 KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPW 97
K L +H++I L+ ++ + +L+R +S K++ AR + D +P I
Sbjct: 57 KTLRTVHSRIISEDLRYNSSLGVKLMR--AYASLKDVATARKVF-----DEIPERNVIII 109
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N +IR Y + RE + VF M +KP +T+P VLKAC+ + G ++ + TK
Sbjct: 110 NVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATK 169
Query: 158 SGLDS-------------------------------DVYTNNNLVRFYGSCRRKRDACKV 186
GL S DV + N+LV Y +R DA +V
Sbjct: 170 VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEV 229
Query: 187 -------------------------------------FDDMCERSVVSWNVIITVCVENL 209
F M ++S+VSWNV+I V ++N
Sbjct: 230 CREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNA 289
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
EAV + M+ GFEPD ++ VL AC + LSLGK +H + + + N L
Sbjct: 290 MPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLEN 349
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
ALIDMYAKCG + AR +F M+ +V +W+AMI G +A+ LFS M++S + P
Sbjct: 350 ALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVP 409
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
+ + F+ L AC+HAG++E+G F M + I P H M D+L RAG +KEAY F
Sbjct: 410 DSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKF 469
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
I MP +PN V ALL A +H +G +L +L P S V+++N YA+
Sbjct: 470 IQEMPMEPNERVWGALLGACRVHS---NTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKA 526
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
G WE+V+N+R MK+ GLKK G S VE+ IH F G S + A IY+ L+ L M
Sbjct: 527 GRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKM 586
Query: 510 KVLNF 514
K L +
Sbjct: 587 KELGY 591
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 221/421 (52%), Gaps = 4/421 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN+LI GYA P A+ +F ++ I P T V+ ACA ++ L++G +
Sbjct: 497 VTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGL 556
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVCVENLWLGE 213
+ K G +SD + N L+ Y C A +F+ + V+WNVII ++N E
Sbjct: 557 IVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKE 616
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
A+ F +M+ F P+ T + VL A L G H +I+ G + N +G +LID
Sbjct: 617 AISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLID 676
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MYAKCG + + LF+ M+ + +W+AM+ G A HG+ + A+ LFS M+ S + + V+
Sbjct: 677 MYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVS 736
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
F+ VL AC H G+VE+G + FH M + IKP HY M D+L RAG E FI M
Sbjct: 737 FVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVM 796
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
P +P+ V ALL + +H +G L++LEPR + V++++ YA+ G W
Sbjct: 797 PVEPDAGVWGALLGSCRMHS---NVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWA 853
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLN 513
R M ++GLKK G SWVEL +H F G S +L ++ + TL M+ +
Sbjct: 854 DAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIG 913
Query: 514 F 514
+
Sbjct: 914 Y 914
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 172/349 (49%), Gaps = 18/349 (5%)
Query: 6 VPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKE 65
+ T FP S+ ++ L R L C L QIHAQI VSG ++ I
Sbjct: 14 IATXASEFPSLSSSTYTNYLHYPR----LLSSCKHLNPLLQIHAQIIVSGFKHHHSI-TH 68
Query: 66 LVRFCTLSSSKNLTYARSILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMK 121
L+ +L +L ARS+ DS P P WN++IR Y S + EA+ ++ M
Sbjct: 69 LINLYSLFHKCDL--ARSVF-----DSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMV 121
Query: 122 RRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKR 181
+G++P ++T+ FVLKAC L EG+ + + GL+ DV+ LV Y +
Sbjct: 122 EKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLK 181
Query: 182 DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
A +VFD M +R VV+WN +I ++ EAV +F M+ +G EP ++L +
Sbjct: 182 RAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGIC 241
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
+L N+ L + +H + R + + LID+Y+KCG V AR +F +M + + +W
Sbjct: 242 KLSNIELCRSIHGYVFRRD--FSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGT 299
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
M+ G A +G E LELF MK ++ N V+ + A +E G
Sbjct: 300 MMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKG 348
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 170/361 (47%), Gaps = 3/361 (0%)
Query: 73 SSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
S ++ AR + V D + W ++ GYA + E + +F MK ++ + +
Sbjct: 274 SKCGDVDVARRVFDQMV-DQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSA 332
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
A AE L +G ++ + +DSD+ L+ Y C A ++F +
Sbjct: 333 VSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQG 392
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
R +V+W+ II V+ + EA+ F +M++ +P+ T++ +L AC +L L LGK +
Sbjct: 393 RDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSI 452
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H ++ + GTAL+ MYAKCG A F+RM ++ TW+++I G AQ G
Sbjct: 453 HCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDP 512
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
A+++F ++ S+I+P+ T +GV+ AC ++ G H + G + +
Sbjct: 513 YNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQG-TCIHGLIVKLGFESDCHVKNA 571
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELE 432
+ D+ A+ G L A F + + ++ A+ + + ++ + + + RL
Sbjct: 572 LIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVII-AAYMQNGHAKEAISSFHQMRLENFH 630
Query: 433 P 433
P
Sbjct: 631 P 631
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 149/323 (46%), Gaps = 16/323 (4%)
Query: 35 LKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LK C +L + H +I GL+ D I LV S +L AR + D
Sbjct: 136 LKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDM--YSKMGDLKRAREVF-----D 188
Query: 92 SVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+P + WN +I G + S+ P EAV F M+ G++P+ + + ++S +
Sbjct: 189 KMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIEL 248
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
+ V + S V +N L+ Y C A +VFD M ++ VSW ++
Sbjct: 249 CRSIHGYVFRRDFSSAV--SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAH 306
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
N E + F KMK ++ + + A E +L GK +H +++ + +
Sbjct: 307 NGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILV 366
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
T L+ MYAKCG A+ LF ++ ++ WSA+I L Q GY EEAL LF M+N +
Sbjct: 367 ATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKM 426
Query: 328 SPNYVTFLGVLCACNHAGMVEDG 350
PN VT + +L AC +++ G
Sbjct: 427 KPNRVTLMSILPACADLSLLKLG 449
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
+LS+C L L +H Q+I G + + T LI++Y+ AR +F +
Sbjct: 38 LLSSCKHLNPL---LQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPS 93
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
W++MI + EALE++ M + P+ TF VL AC A +++G +FH
Sbjct: 94 RILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGV-WFH 152
Query: 356 EMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
G++ + D+ ++ G LK A MP
Sbjct: 153 GEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMP 191
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 155/473 (32%), Positives = 247/473 (52%), Gaps = 17/473 (3%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN---DSVPIPWNNLIR 102
+++ Q+ + + + L++ C L S L +A ++ + DS +L+
Sbjct: 66 ELYVQMLRANVSPTSYTFPSLIKACGLVS--QLRFAEAVHGHVWRNGFDSHVFVQTSLVD 123
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
Y+ R E+V VF +M R + F + ++ + ++ ++ + D
Sbjct: 124 FYSSMGRIEESVRVFDEMPERDV----FAWTTMVSGLVRVGDMSSAGRLFDMMP----DR 175
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
++ T N L+ Y R A +F+ M R ++SW +I +N EA+G F +M
Sbjct: 176 NLATWNTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMA 235
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
G PDE TM V+SAC LG L LGK +H +++ G L+ +G+ALIDMYAKCG++
Sbjct: 236 KHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLD 295
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
+ L+F ++ E N++ W+++I GLA HGYAEEAL +F M+ I PN VTF+ VL ACN
Sbjct: 296 RSLLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACN 355
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVL 402
HAG++E+G + F M H I P HY M D+L++AG L+EA I M +PN ++
Sbjct: 356 HAGLIEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIW 415
Query: 403 RALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFM 462
ALLS +H + +L+ LEP S ++ N AEV W + + +R M
Sbjct: 416 GALLSGCKLHR---NLEIAQVAANKLMVLEPGNSGYYTLLVNMNAEVNRWGEAAKIRLTM 472
Query: 463 KNVGL-KKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
K G+ K+ G SW+E+ +H+F + S IY +L L+ MK+ +
Sbjct: 473 KEQGVEKRCPGSSWIEMESQVHQFAASDKSHAASDEIYSLLAELDGQMKLAGY 525
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 138/292 (47%), Gaps = 45/292 (15%)
Query: 71 TLSSSKNLTYARSILCNYVNDSVP--IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPT 128
LS+ + YA + Y +P +N +I+G+ S +P +A+ +++ M R + PT
Sbjct: 23 ALSTFNRMDYA---VLAYTQMEIPNVFVYNAMIKGFVQSYQPVQALELYVQMLRANVSPT 79
Query: 129 EFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD 188
+T+P ++KAC +S L V +V ++G DS V+ +LV FY S R ++ +VFD
Sbjct: 80 SYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVRVFD 139
Query: 189 DMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSL 248
+M ER V +W +++ V + A F M PD +L
Sbjct: 140 EMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMM------PDR----------------NL 177
Query: 249 GKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ 308
W LID YA+ V A LLF++M ++ +W+ MI +Q
Sbjct: 178 ATW-----------------NTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQ 220
Query: 309 HGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR-YFHEMEH 359
+ EAL +F+ M ISP+ VT V+ AC H G ++ G +++ M+H
Sbjct: 221 NKRFREALGVFNEMAKHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQH 272
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 115/287 (40%), Gaps = 37/287 (12%)
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
A + K+ + D Y N + + R A + M +V +N +I V++
Sbjct: 3 AVMVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQPV 62
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
+A+ +V+M P T ++ AC + L + VH + G + + T+L+
Sbjct: 63 QALELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLV 122
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP--- 329
D Y+ G + + +F M E +V+ W+ M+ GL + G A LF M + +++
Sbjct: 123 DFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATWNT 182
Query: 330 ------------------------NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKP 365
+ +++ ++ + + F+EM HGI P
Sbjct: 183 LIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAK-HGISP 241
Query: 366 MRIHYHTMADILARAGHL------KEAYTFIMNMPFQPNPIVLRALL 406
+ TMA +++ HL KE + +IM F + + AL+
Sbjct: 242 DEV---TMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALI 285
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 150/469 (31%), Positives = 246/469 (52%), Gaps = 8/469 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+H+ + SGL +D + LV + S + +R I ++ +V + W LI GY
Sbjct: 269 QLHSWVIRSGLASDVFVGCTLVDM--YAKSAAVENSRKIFNTMLHHNV-MSWTALISGYV 325
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
S + +EA+ +F +M + P FT+ VLKACA + G Q+ K GL +
Sbjct: 326 QSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINC 385
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N+L+ Y A K F+ + E++++S+N + L E+ + V+ +G
Sbjct: 386 VGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDESFNHEVEHTGVG 445
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
P L+ +AC +G + G+ +H +++ G N + ALI MY+KCG A
Sbjct: 446 ASPFTYACLLSGAAC--IGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAAL 503
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F+ M NV TW+++I G A+HG+A +ALELF M + PN VT++ VL AC+H G
Sbjct: 504 QVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVG 563
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
++++ +++F+ M + H I P HY M D+L R+G L EA FI +MPF + +V R
Sbjct: 564 LIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTF 623
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
L + +H +G +++LE EP ++++N YA G W+ V+ +R+ MK
Sbjct: 624 LGSCRVHR---NTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQK 680
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
L K G SW+E+ +H+F+ G S + IY L+ L L +K L +
Sbjct: 681 KLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALKIKNLGY 729
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 189/390 (48%), Gaps = 20/390 (5%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP-IPWNNLIRGYA 105
+H ++ SGL D+ +L L+ S + A SI N + + W+ +I +A
Sbjct: 61 LHHKLIDSGLPLDSVLLNSLITL--YSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFA 118
Query: 106 WSDRPREAVWVFIDM---KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG-LD 161
+ A+ F+ M R I P E+ + +L++C+ G+ + A + K+G D
Sbjct: 119 NNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFD 178
Query: 162 SDVYTNNNLVR-FYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK 220
S V L+ F + A VFD M +++V+W ++IT + L +AV F +
Sbjct: 179 SHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCR 238
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
+ + PD+ T+ +LSAC EL SLGK +H +I G + +G L+DMYAK A
Sbjct: 239 LLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAA 298
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
V +R +F+ M NV +W+A+I G Q +EA++LF NM + ++PN TF VL A
Sbjct: 299 VENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKA 358
Query: 341 CNHAGMVEDGY-RYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
C A + + G + H G+ + +++ ++ AR+G ++ A N+ F+ N
Sbjct: 359 C--ASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARK-AFNILFEKNL 415
Query: 400 IVL--------RALLSASSIHDAKYQDGVG 421
I +AL S S + GVG
Sbjct: 416 ISYNTAADANAKALDSDESFNHEVEHTGVG 445
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 7/215 (3%)
Query: 134 FVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC-- 191
+LKAC L G + + SGL D N+L+ Y C +A +F +M
Sbjct: 44 LLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHH 103
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG---FEPDETTMLVVLSACTELGNLSL 248
+R +VSW+ II+ N A+ F+ M P+E +L +C+ +
Sbjct: 104 KRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTT 163
Query: 249 GKWVHLQLIERGTV-LNCQLGTALIDMYAKCG-AVGCARLLFSRMEEINVWTWSAMILGL 306
G + L++ G + +G ALIDM+ K G + AR++F +M+ N+ TW+ MI
Sbjct: 164 GLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRY 223
Query: 307 AQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
+Q G ++A++LF + S +P+ T +L AC
Sbjct: 224 SQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSAC 258
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 218 FVKMKDLGFEP--------DETTML------VVLSACTELGNLSLGKWVHLQLIERGTVL 263
+++ KDL FE D TT ++L AC GNL LGK +H +LI+ G L
Sbjct: 13 YLQAKDLKFESLRKAISRLDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPL 72
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRM--EEINVWTWSAMILGLAQHGYAEEALELFSN 321
+ L +LI +Y+KCG A +F M + ++ +WSA+I A + AL F +
Sbjct: 73 DSVLLNSLITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLH 132
Query: 322 MKNSS---ISPNYVTFLGVLCACNHAGMVEDGYRYF 354
M S I PN F +L +C++ G F
Sbjct: 133 MLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIF 168
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 136/413 (32%), Positives = 224/413 (54%), Gaps = 5/413 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I G A + EA+ + +M + ++P FT +L E + + +G ++
Sbjct: 165 VSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGY 224
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ G D DV+ ++L+ Y C + + F + R +SWN II CV+N +
Sbjct: 225 AIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQG 284
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+G+F +M +P + + V+ AC L L+LGK +H +I G N + ++L+DM
Sbjct: 285 LGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDM 344
Query: 275 YAKCGAVGCARLLFSRME--EINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
YAKCG + AR +F+++E + ++ +W+A+I+G A HG+A +A+ LF M + P YV
Sbjct: 345 YAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYV 404
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
F+ VL AC+HAG+V++G++YF+ M+ G+ P HY +AD+L RAG L+EAY FI N
Sbjct: 405 AFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISN 464
Query: 393 MPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMW 452
M +P V LL+A H + +V ++L ++P VI++N Y+ W
Sbjct: 465 MGEEPTGSVWSTLLAACRAHK---NIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRW 521
Query: 453 EKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+ +R M+ GLKK SW+E+G +H F +G S I + L L
Sbjct: 522 RDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEALNIL 574
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 138/318 (43%), Gaps = 24/318 (7%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +I+ YA R ++ F ++ GI P +P +L+A N + A
Sbjct: 42 LAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAA 101
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRR---------------------KRDAC-KVFDDMCE 192
V + G D+YT N L+ Y K D+ K+FD M
Sbjct: 102 VIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPV 161
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
R VVSWN +I +N EA+ +M PD T+ +L TE N++ GK +
Sbjct: 162 RDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEI 221
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H I G + +G++LIDMYAKC V + F + + +W+++I G Q+G
Sbjct: 222 HGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRF 281
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
++ L F M + P V+F V+ AC H + G + H G + +
Sbjct: 282 DQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLG-KQLHAYIIRLGFDDNKFIASS 340
Query: 373 MADILARAGHLKEA-YTF 389
+ D+ A+ G++K A Y F
Sbjct: 341 LLDMYAKCGNIKMARYIF 358
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 222/383 (57%), Gaps = 3/383 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ +N LI GY+ + EA+ V+ ++ G++P FT+ + +C+ S + EG QV +
Sbjct: 314 VSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVH 373
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K GLDSDV N++V FY C A + F+ + + V W II+ +N +A
Sbjct: 374 SVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKA 433
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F KM+ + DE + V+ A + + G+ +H +++ G +G+A+IDM
Sbjct: 434 LMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDM 493
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG V A+ +FS M E NV +W++MI G AQ+G+ +EAL LF M +S I P VTF
Sbjct: 494 YSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTF 553
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+G+L AC+HAG+VE+G +++ M H +GI P H M D+L RAG+L+EA F+++
Sbjct: 554 VGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLLSSS 613
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
F P + +LLSA +H K D VG+ + L LEP S + ++N YA +W +
Sbjct: 614 FSKEPGIWGSLLSACGVH--KNSD-VGSRAAQHCLFLEPHYSSSYTALSNIYASKELWSE 670
Query: 455 VSNVRRFMKNVGLKKMKGMSWVE 477
VS +R MK++G++K G SW+E
Sbjct: 671 VSRIRDLMKDMGVEKEPGCSWIE 693
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 150/285 (52%), Gaps = 13/285 (4%)
Query: 88 YVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDM----KRRGIKPTEFTYPFVLKAC 139
++ D +P + WN++I GY+ EA +F M + + ++FT VLKAC
Sbjct: 97 FLFDDMPERDDVSWNSMIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKAC 156
Query: 140 AEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWN 199
+ G V K G DSD++ + + V Y C A FD + + +V+WN
Sbjct: 157 GGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWN 216
Query: 200 VIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER 259
+IT +N + EA+ F +M+ GF+P++TT VL A T + + ++G+ H ++++
Sbjct: 217 TMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKL 276
Query: 260 GTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELF 319
G ++ + TAL+DMY+K + F M + N+ +++A+I G + G EEAL ++
Sbjct: 277 GCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVY 336
Query: 320 SNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIK 364
S +++ + P+ TF+G+ +C+ + V +G + HVH +K
Sbjct: 337 SQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQV-----HVHSVK 376
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 159/354 (44%), Gaps = 37/354 (10%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W + I A +A+ F+ M R GI+P TY + ACA+ + + +
Sbjct: 7 VRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATSLHCL 66
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ K G + ++ ++ L+ Y R ++A +FDDM ER VSWN +I + EA
Sbjct: 67 ILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGLNEEA 126
Query: 215 VGYFVKM----KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
G F M ++ + T+ VL AC LG +GK VH ++ G + + +
Sbjct: 127 CGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGS 186
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
+ MY KCG + A L F ++E ++ W+ MI G AQ+ Y EEA+ELF M+ PN
Sbjct: 187 TVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPN 246
Query: 331 YVTFLGVLCA-----------CNHAGMVE--------------DGYRYFHEMEHVH---G 362
TF VL A C HA +++ D Y F+++E V G
Sbjct: 247 DTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFG 306
Query: 363 IKPMR--IHYHTMADILARAGHLKEA---YTFIMNMPFQPNPIVLRALLSASSI 411
R + ++ + + G +EA Y+ + + +P+ L S+ S+
Sbjct: 307 EMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSV 360
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 114/238 (47%), Gaps = 10/238 (4%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILCNYVNDSVPIPWNNLIR 102
Q+H GL +D + +V F C + S + +N + W +I
Sbjct: 369 QVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFES------INRPNSVCWAGIIS 422
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
G+A + +A+ F M++ K EF+ V+KA + + + +G + A+V KSGLD
Sbjct: 423 GFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDC 482
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
+Y + ++ Y C DA KVF M E++VVSWN +IT +N + EA+ F +M
Sbjct: 483 TIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMT 542
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGK-WVHLQLIERGTVLNCQLGTALIDMYAKCG 279
G P T + +L AC+ G + G+ + +L + G + + T ++D+ + G
Sbjct: 543 SSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAG 600
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 70/136 (51%)
Query: 190 MCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
M E +VV W IT + +A+ F++M G EP+ T +SAC + SL
Sbjct: 1 MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
+H ++++G + + LI MY+K + AR LF M E + +W++MI G +Q
Sbjct: 61 TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQR 120
Query: 310 GYAEEALELFSNMKNS 325
G EEA LF +M NS
Sbjct: 121 GLNEEACGLFCSMINS 136
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 154/474 (32%), Positives = 235/474 (49%), Gaps = 41/474 (8%)
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
++ ARS+ V+ + WN +I GY S +A +F M + EFT+ VL
Sbjct: 247 DVNAARSVF-EEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVL 305
Query: 137 KACAEISGLNEGMQVQANVTKSGL----DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
ACA G V + + ++ + NN LV Y + A ++FD M
Sbjct: 306 SACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNL 365
Query: 193 RSVVSWNVIITVCVENLWLGEAV-------------------GY------------FVKM 221
+ VVSWN I++ +++ L +AV GY F +M
Sbjct: 366 KDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQM 425
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
+ +P + T ++AC ELG L G+ +H L++ G + G AL+ MYAKCGAV
Sbjct: 426 RAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAV 485
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
ARL+F M ++ +W+AMI L QHG+ EALELF M I P+ ++FL +L AC
Sbjct: 486 NDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTAC 545
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIV 401
NHAG+V++G+ YF M+ GI P HY + D+L R+G + EA I MPF+P P +
Sbjct: 546 NHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSI 605
Query: 402 LRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRR 460
A+LS + D ++ G +L + P+ ++++N Y+ G W + VR+
Sbjct: 606 WEAILSGCRTNGDMEF----GAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRK 661
Query: 461 FMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
M++ G+KK G SW+E+G IH F G E +YQ LE + M+ L +
Sbjct: 662 LMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGY 715
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 127/279 (45%), Gaps = 13/279 (4%)
Query: 44 LYQIHAQIQVSGLQNDAQILKELVRFCTLSS----SKNLTYARSI--LCNYVNDSVPIPW 97
LY +I ++ D LK++V + T+ S S L A + + Y ND + W
Sbjct: 346 LYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKND---LSW 402
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
++ GY +A+ +F M+ +KP ++TY + AC E+ L G Q+ A++ +
Sbjct: 403 MVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQ 462
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
G ++ N L+ Y C DA VF M VSWN +I+ ++ EA+
Sbjct: 463 CGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALEL 522
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER--GTVLNCQLGTALIDMY 275
F +M G +PD + L +L+AC G + G + + + ++R G LID+
Sbjct: 523 FDQMVAEGIDPDRISFLTILTACNHAGLVDEG-FHYFESMKRDFGISPGEDHYARLIDLL 581
Query: 276 AKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAE 313
+ G +G AR L M E W A++ G +G E
Sbjct: 582 GRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDME 620
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 160/400 (40%), Gaps = 80/400 (20%)
Query: 91 DSVP------IPWNNLIRGYAWSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEIS 143
D+VP + N ++ +A + AV VF + G ++P ++++ ++ A ++
Sbjct: 116 DAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMH 175
Query: 144 GLNEG--MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKR---DACKVFDDMCE------ 192
L Q+ +V KSG + + +N L+ Y C DA KV D+M +
Sbjct: 176 NLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTW 235
Query: 193 ----------------RSV---------VSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
RSV V WN +I+ V++ +A F +M
Sbjct: 236 TTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVP 295
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLI--ERGTVLNCQL--GTALIDMYAKCGAVGC 283
DE T VLSAC G GK VH Q+I + V L AL+ +Y+K G +
Sbjct: 296 LDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVI 355
Query: 284 ARLLFSRM--EEINVW-----------------------------TWSAMILGLAQHGYA 312
A+ +F M +++ W +W M+ G G +
Sbjct: 356 AKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLS 415
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
E+AL+LF+ M+ + P T+ G + AC G ++ G R H G + +
Sbjct: 416 EDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHG-RQLHAHLVQCGFEASNSAGNA 474
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
+ + A+ G + +A + MP + + A++SA H
Sbjct: 475 LLTMYAKCGAVNDARLVFLVMP-NLDSVSWNAMISALGQH 513
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 89/234 (38%), Gaps = 46/234 (19%)
Query: 168 NNLVRFYGSCRRKRDACKVFDDM--CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
+LV + R RDA FD + R V N +++ AV F + G
Sbjct: 96 TSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 155
Query: 226 -FEPDETTMLVVLSACTELGNLSLG--KWVHLQLIERGTVLNCQLGTALIDMYAKC---- 278
PD+ + ++SA ++ NL+ +H +++ G + ALI +Y KC
Sbjct: 156 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPE 215
Query: 279 ------------------------------GAVGCARLLFSRMEEINVWTWSAMILGLAQ 308
G V AR +F ++ W+AMI G Q
Sbjct: 216 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 275
Query: 309 HGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
G +A ELF M + + + TF VL AC +AG +F + VHG
Sbjct: 276 SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAG-------FFVHGKSVHG 322
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 226/409 (55%), Gaps = 3/409 (0%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN ++ GY S++ R+A+ F M GI E T +KA + L +G Q+QA
Sbjct: 1067 WNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAI 1126
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
K G ++D++ ++ ++ Y C +A ++F ++ V+W +I+ +EN A+
Sbjct: 1127 KLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALS 1186
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
+ M+ G +PDE T ++ A + L L GK +H +++ L+ +GT+L+DMY
Sbjct: 1187 VYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYC 1246
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KCG+V A +F +M+ V W+AM+LGLAQHG+ +EAL LF M+++ I P+ VTF+G
Sbjct: 1247 KCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIG 1306
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
VL AC+H+G+ + Y+YF M +GI P HY + D L RAG ++EA I +MPF+
Sbjct: 1307 VLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFK 1366
Query: 397 PNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVS 456
+ + RALL A K V +LL L+P S V+++N YA W+ V+
Sbjct: 1367 ASASMYRALLGACR---TKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVT 1423
Query: 457 NVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+ R MK +KK G SW+++ +H F S + + IY+ +E L
Sbjct: 1424 DARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDL 1472
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 9/213 (4%)
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
++ ++ L G + A + SG D Y NNL+ Y C A +VFD +R +V
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 197 SWNVIITV-------CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
+WN I+ EN+ E F +++ GF T+ +L C G + +
Sbjct: 679 TWNSILAAYAQFADSSYENVL--EGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVS 736
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
+ VH ++ G L+ + AL+++Y K G VG ARLLF +M E + W+ M+ ++
Sbjct: 737 ETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVEN 796
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
+ +EAL FS S P++ V+ N
Sbjct: 797 SFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVN 829
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 123/294 (41%), Gaps = 31/294 (10%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN +++ Y + EA+ F R G P + S L+
Sbjct: 786 WNVMLKAYVENSFQDEALRFFSAFHRSGFFP-------------DFSNLH--------CV 824
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
G++SDV N R + + K A K+F ++ +WN +T + + A+
Sbjct: 825 IGGVNSDVSNN----RKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAID 880
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F + D T++++LSA +L LG+ +H +I+ + +L++MY+
Sbjct: 881 CFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYS 940
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
K G V A F E+++ +W+ MI AQ+ EA+ F ++ + P+ T
Sbjct: 941 KAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLAS 1000
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIH----YHTMADILARAGHLKEA 386
VL AC+ E Y HV+ IK I+ + D+ ++ G + EA
Sbjct: 1001 VLRACSTGD--EGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA 1052
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 143/354 (40%), Gaps = 34/354 (9%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+ HA+I SG D + L+ S +L AR + + +D + WN+++ YA
Sbjct: 632 RAHARIVTSGDLPDRYLTNNLI--TMYSKCGSLCSARQVF-DKSSDRDLVTWNSILAAYA 688
Query: 106 -WSDRPREAVW----VFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGL 160
++D E V +F ++ G T T +LK C + V K G
Sbjct: 689 QFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGF 748
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK 220
+ D++ + LV Y A +FD M ER V WNV++ VEN + EA+ +F
Sbjct: 749 ELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSA 808
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
GF PD + + V+ ++S + H + ++
Sbjct: 809 FHRSGFFPDFSNLHCVIGGVNS--DVSNNRKRHAEQVK---------------------- 844
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
A +F + N++ W+ + G A++ F + S+I + VT + +L A
Sbjct: 845 -AYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSA 903
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
A ++ G + H + P+ +++ ++ ++AG + A +N P
Sbjct: 904 AVGADDLDLGEQ-IHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSP 956
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 154/474 (32%), Positives = 235/474 (49%), Gaps = 41/474 (8%)
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
++ ARS+ V+ + WN +I GY S +A +F M + EFT+ VL
Sbjct: 249 DVNAARSVF-EEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVL 307
Query: 137 KACAEISGLNEGMQVQANVTKSGL----DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
ACA G V + + ++ + NN LV Y + A ++FD M
Sbjct: 308 SACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNL 367
Query: 193 RSVVSWNVIITVCVENLWLGEAV-------------------GY------------FVKM 221
+ VVSWN I++ +++ L +AV GY F +M
Sbjct: 368 KDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQM 427
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
+ +P + T ++AC ELG L G+ +H L++ G + G AL+ MYAKCGAV
Sbjct: 428 RAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAV 487
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
ARL+F M ++ +W+AMI L QHG+ EALELF M I P+ ++FL +L AC
Sbjct: 488 NDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTAC 547
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIV 401
NHAG+V++G+ YF M+ GI P HY + D+L R+G + EA I MPF+P P +
Sbjct: 548 NHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSI 607
Query: 402 LRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRR 460
A+LS + D ++ G +L + P+ ++++N Y+ G W + VR+
Sbjct: 608 WEAILSGCRTNGDMEF----GAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRK 663
Query: 461 FMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
M++ G+KK G SW+E+G IH F G E +YQ LE + M+ L +
Sbjct: 664 LMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGY 717
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 127/279 (45%), Gaps = 13/279 (4%)
Query: 44 LYQIHAQIQVSGLQNDAQILKELVRFCTLSS----SKNLTYARSI--LCNYVNDSVPIPW 97
LY +I ++ D LK++V + T+ S S L A + + Y ND + W
Sbjct: 348 LYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKND---LSW 404
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
++ GY +A+ +F M+ +KP ++TY + AC E+ L G Q+ A++ +
Sbjct: 405 MVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQ 464
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
G ++ N L+ Y C DA VF M VSWN +I+ ++ EA+
Sbjct: 465 CGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALEL 524
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER--GTVLNCQLGTALIDMY 275
F +M G +PD + L +L+AC G + G + + + ++R G LID+
Sbjct: 525 FDQMVAEGIDPDRISFLTILTACNHAGLVDEG-FHYFESMKRDFGISPGEDHYARLIDLL 583
Query: 276 AKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAE 313
+ G +G AR L M E W A++ G +G E
Sbjct: 584 GRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDME 622
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 142/327 (43%), Gaps = 49/327 (14%)
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEISGLNEG--MQVQAN 154
N ++ +A + AV VF + G ++P ++++ ++ A ++ L Q+ +
Sbjct: 131 NAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCS 190
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKR---DACKVFDDMCE------------------- 192
V KSG + + +N L+ Y C DA KV D+M +
Sbjct: 191 VLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDV 250
Query: 193 ---RSV---------VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
RSV V WN +I+ V++ +A F +M DE T VLSAC
Sbjct: 251 NAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSAC 310
Query: 241 TELGNLSLGKWVHLQLI--ERGTVLNCQL--GTALIDMYAKCGAVGCARLLFSRMEEINV 296
G GK VH Q+I + V L AL+ +Y+K G + A+ +F M +V
Sbjct: 311 ANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDV 370
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
+W+ ++ G G ++A+E+F M N ++++ ++ H G+ ED + F++
Sbjct: 371 VSWNTILSGYIDSGCLDKAVEVFKVMPYK----NDLSWMVMVSGYVHGGLSEDALKLFNQ 426
Query: 357 MEHVHGIKPMRIHYHTMADILARAGHL 383
M +KP +T A +A G L
Sbjct: 427 MR-AEDVKPCD---YTYAGAIAACGEL 449
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 103/271 (38%), Gaps = 46/271 (16%)
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
++P + + L+ + A + +S D +LV + + R RDA FD +
Sbjct: 61 SHPHLTLRLIHLYTLSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAV 120
Query: 191 --CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG-FEPDETTMLVVLSACTELGNLS 247
R V N +++ AV F + G PD+ + ++SA ++ NL+
Sbjct: 121 PPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLA 180
Query: 248 LG--KWVHLQLIERGTVLNCQLGTALIDMYAKC--------------------------- 278
+H +++ G + ALI +Y KC
Sbjct: 181 APHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTM 240
Query: 279 -------GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
G V AR +F ++ W+AMI G Q G +A ELF M + + +
Sbjct: 241 VVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDE 300
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
TF VL AC +AG +F + VHG
Sbjct: 301 FTFTSVLSACANAG-------FFVHGKSVHG 324
>gi|356541012|ref|XP_003538978.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g50270-like [Glycine max]
Length = 560
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 162/442 (36%), Positives = 234/442 (52%), Gaps = 17/442 (3%)
Query: 45 YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPWNNL 100
+ I+AQI G D I L+ ++S + AR + D P + W L
Sbjct: 127 FMIYAQIFKLGFDLDLFIGNALIP--AFANSGFVESARQVF-----DESPFQDTVAWTAL 179
Query: 101 IRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG- 159
I GY +D P EA+ F+ M+ R T +L+A A + + G V ++G
Sbjct: 180 INGYVKNDCPGEALKCFVKMRLRDRSVDAVTVASILRAAALVGDADFGRWVHGFYVEAGR 239
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
+ D Y + L+ Y C DACKVF+++ R VV W V++ V++ +A+ F
Sbjct: 240 VQLDGYVFSALMDMYFKCGHCEDACKVFNELPHRDVVCWTVLVAGYVQSNKFQDALRAFW 299
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNCQLGTALIDMYAKC 278
M P++ T+ VLSAC ++G L G+ VH Q IE + +N LGTAL+DMYAKC
Sbjct: 300 DMLSDNVAPNDFTLSSVLSACAQMGALDQGRLVH-QYIECNKINMNVTLGTALVDMYAKC 358
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
G++ A +F M NV+TW+ +I GLA HG A AL +F M S I PN VTF+GVL
Sbjct: 359 GSIDEALRVFENMPVKNVYTWTVIINGLAVHGDALGALNIFCCMLKSGIQPNEVTFVGVL 418
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
AC+H G VE+G R F M+H + +KP HY M D+L RAG+L++A I NMP +P+
Sbjct: 419 AACSHGGFVEEGKRLFELMKHAYHLKPEMDHYGCMVDMLGRAGYLEDAKQIIDNMPMKPS 478
Query: 399 PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
P VL AL A +H A +G + L+ +P S + ++AN Y WE + V
Sbjct: 479 PGVLGALFGACLVHKAFE---MGEHIGNLLVNQQPNHSGSYALLANLYKMCQNWEAAAQV 535
Query: 459 RRFMKNVGLKKMKGMSWVELGG 480
R+ MK + + K G S +E+ G
Sbjct: 536 RKLMKGLRVVKAPGYSRIEVDG 557
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 172/357 (48%), Gaps = 14/357 (3%)
Query: 46 QIHAQIQVSGL----QNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
QI + I SGL N+ L +L++ S ++N + D++ P L+
Sbjct: 26 QIQSIIVTSGLYSTQDNNTLFLTKLLQCVPFSQNQNTCLL------LLFDTINTPNTRLL 79
Query: 102 -RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGL 160
+ A P ++ + ++++G++P + T+P +LK ++ N M + A + K G
Sbjct: 80 NKMIAACSHPHISLLCYAKLRQKGVQPDKHTFPLLLKTFSKSIAQNPFM-IYAQIFKLGF 138
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK 220
D D++ N L+ + + A +VFD+ + V+W +I V+N GEA+ FVK
Sbjct: 139 DLDLFIGNALIPAFANSGFVESARQVFDESPFQDTVAWTALINGYVKNDCPGEALKCFVK 198
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNCQLGTALIDMYAKCG 279
M+ D T+ +L A +G+ G+WVH +E G V L+ + +AL+DMY KCG
Sbjct: 199 MRLRDRSVDAVTVASILRAAALVGDADFGRWVHGFYVEAGRVQLDGYVFSALMDMYFKCG 258
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
A +F+ + +V W+ ++ G Q ++AL F +M + +++PN T VL
Sbjct: 259 HCEDACKVFNELPHRDVVCWTVLVAGYVQSNKFQDALRAFWDMLSDNVAPNDFTLSSVLS 318
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
AC G ++ G R H+ + I + D+ A+ G + EA NMP +
Sbjct: 319 ACAQMGALDQG-RLVHQYIECNKINMNVTLGTALVDMYAKCGSIDEALRVFENMPVK 374
>gi|224058579|ref|XP_002299552.1| predicted protein [Populus trichocarpa]
gi|222846810|gb|EEE84357.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 160/503 (31%), Positives = 262/503 (52%), Gaps = 34/503 (6%)
Query: 12 IFPPKPSNCNSDLLS-KARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFC 70
+ P KP+ ++ S + CLS L++C Q+HA++ G + L L+ +
Sbjct: 8 LLPTKPTKNHNQFQSFSLKSCLSLLEICKFTTEFAQLHARLTKLGFIKNPLALTRLLCYS 67
Query: 71 TLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMK-RRGIKPTE 129
++S N+ YA+SI N+ + +N +IRGYA ++P A+ +F M +
Sbjct: 68 SISQYANINYAQSIF-NFDKNPNTFAYNVMIRGYAQREKPENALSLFYSMLCNANSGQNK 126
Query: 130 FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD 189
T+PFVLKAC+++ + EG QV V K GL D++ N+L+ Y SC AC+VF+
Sbjct: 127 LTFPFVLKACSQVRAIEEGKQVHGLVFKHGLSEDLFVQNSLISMYSSCGLIGFACQVFNK 186
Query: 190 MCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG-----------------------F 226
+ + VVSWN +I+ V+ ++ E F +M F
Sbjct: 187 IDDPDVVSWNSMISGLVDLGFVEEGKQMFDRMSKRSLVTWNCLIDGYVKAGLLMEARELF 246
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
+ TM+ VL+AC+ LG L G+W+ + + G +N LGTAL++M+AKCG++ A
Sbjct: 247 DQMRFTMVSVLTACSYLGALEQGEWMQAHIEKNGIDVNSVLGTALVEMFAKCGSIERALS 306
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
+F +EE +V W+++I LA HG+ +EA +FS+M S+ + + FLG+L C H G+
Sbjct: 307 VFKSIEERDVGAWNSIIHKLAAHGHGQEAFAIFSDMLRSNTLLDGIIFLGLLSVCRHLGL 366
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN---MPFQPNPIVLR 403
V++G R+F M +G+ P HY M D+L A L+EA I + + + +
Sbjct: 367 VDEGKRFFQLMSEEYGLVPKVEHYGCMVDLLCHADLLEEARDLIDSSHASQMKSSVPMWG 426
Query: 404 ALLSASSIHDAKYQDGV-GNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFM 462
ALL S + ++ V G + LL+L+P +++N Y+ G++EK VR M
Sbjct: 427 ALLGVS----CQLKNIVMGEYAAKHLLQLDPFDGNCYTVLSNLYSAAGLYEKAIEVRNEM 482
Query: 463 KNVGLKKMKGMSWVELGGSIHRF 485
K GL+K+ G S +E+ G + F
Sbjct: 483 KKQGLEKIPGSSSMEIDGLVLDF 505
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 158/504 (31%), Positives = 248/504 (49%), Gaps = 39/504 (7%)
Query: 39 CSKKHLYQIHAQIQVSGLQNDAQILKELV------RFCTLSSSKNLTYARSILCNYVNDS 92
CS+ +I +I L+N I V +C K R + V +
Sbjct: 544 CSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKK---GRLVFDGVVRRT 600
Query: 93 VPIPWNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
V + WN L+ GYA ++ +A+ +F++M P T+ VL AC ++ +
Sbjct: 601 VAV-WNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGI 659
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
+ K G D Y N L+ Y R + +F M +R +VSWN +IT C+
Sbjct: 660 HGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRY 719
Query: 212 GEAVGY---------------FVKMKDLG---FEPDETTMLVVLSACTELGNLSLGKWVH 253
+A+ FV +D G F+P+ T++ VL C L L GK +H
Sbjct: 720 DDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIH 779
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
+++ ++ +G+AL+DMYAKCG + A +F +M NV TW+ +I+ HG E
Sbjct: 780 AYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGE 839
Query: 314 EALELFSNMKNSS------ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
EALELF M I PN VT++ + AC+H+GMV++G FH M+ HG++P
Sbjct: 840 EALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRG 899
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPI-VLRALLSASSIHDAKYQDGVGNEVRR 426
HY + D+L R+G +KEAY I MP N + +LL A IH + G +
Sbjct: 900 DHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVE---FGEIAAK 956
Query: 427 RLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFY 486
L LEP + + V+++N Y+ G+W++ VR+ MK +G++K G SW+E G +H+F
Sbjct: 957 HLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFL 1016
Query: 487 SGYDSQVELAGIYQILETLNLHMK 510
SG S + +++ LETL+ M+
Sbjct: 1017 SGDASHPQSKELHEYLETLSQRMR 1040
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 152/329 (46%), Gaps = 16/329 (4%)
Query: 37 LCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP 96
LC K QIHA + G + + +LT AR + + + D +
Sbjct: 346 LCLGK----QIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVF-DDIPDRDHVS 400
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI-SGLNEGMQVQANV 155
WN++I + ++ +F M + PT FT V AC+ + G+ G QV A
Sbjct: 401 WNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYT 460
Query: 156 TKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
++G D YTNN LV Y R DA +F + +VSWN +I+ +N EA+
Sbjct: 461 LRNG-DLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEAL 519
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQLGTALIDM 274
Y M G PD T+ VL AC++L L +G+ +H + G ++ N +GTAL+DM
Sbjct: 520 MYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDM 579
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVT 333
Y C RL+F + V W+A++ G A++ + ++AL LF M S PN T
Sbjct: 580 YCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATT 639
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
F VL AC + F + E +HG
Sbjct: 640 FASVLPACVRC-------KVFSDKEGIHG 661
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 124/254 (48%), Gaps = 6/254 (2%)
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
P W +L+R S R+A+ + M P F +P VLKA A + L G Q+ A
Sbjct: 295 PSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHA 354
Query: 154 NVTKSG--LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWN-VIITVCVENLW 210
+V K G S V N+LV YG C A +VFDD+ +R VSWN +I T+C W
Sbjct: 355 HVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEW 414
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL-GNLSLGKWVHLQLIERGTVLNCQLGT 269
++ F M +P T++ V AC+ + G + LGK VH + G L
Sbjct: 415 -ELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGD-LRTYTNN 472
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
AL+ MYA+ G V A+ LF + ++ +W+ +I L+Q+ EEAL M + P
Sbjct: 473 ALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRP 532
Query: 330 NYVTFLGVLCACNH 343
+ VT VL AC+
Sbjct: 533 DGVTLASVLPACSQ 546
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 9/199 (4%)
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
RS W ++ + +A+ + M PD VL A + +L LGK +
Sbjct: 293 RSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQI 352
Query: 253 HLQLIERGTVLNCQLGTA--LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
H + + G + A L++MY KCG + AR +F + + + +W++MI L +
Sbjct: 353 HAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFE 412
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
E +L LF M + ++ P T + V AC+H V G R ++ H + ++ +
Sbjct: 413 EWELSLHLFRLMLSENVDPTSFTLVSVAHACSH---VRGGVRLGKQV-HAYTLRNGDLRT 468
Query: 371 HT---MADILARAGHLKEA 386
+T + + AR G + +A
Sbjct: 469 YTNNALVTMYARLGRVNDA 487
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 152/412 (36%), Positives = 220/412 (53%), Gaps = 7/412 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W LI GY + EA+ +F+ M + P T+ VL AC + L+ G V
Sbjct: 172 VSWTGLISGYVRTGLFDEAINLFLKMD---VVPNVATFVSVLVACGRMGYLSMGKGVHGL 228
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V K + N LV Y C +A K+FD++ +R +VSW II+ V+ ++
Sbjct: 229 VYKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDS 288
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F M+ G EPD + VLSAC LG L G+WV + +G + +GTAL+DM
Sbjct: 289 LELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDM 348
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG + A +F+ + N++TW+A++ GLA HG+ EAL+ F M + I PN VTF
Sbjct: 349 YAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTF 408
Query: 335 LGVLCACNHAGMVEDGYRYFHEM-EHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
L +L AC H+G+V +G YF++M P HY M D+L RAG L EAY FI NM
Sbjct: 409 LAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNM 468
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
P P+ ++ ALLSA A + E+ LLEL+ + S V+++N YA W+
Sbjct: 469 PLPPDVLIWGALLSACK---ANGNVELSQEILSHLLELKSQDSGVYVLLSNIYATNERWD 525
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
V+ VRR MK+ G++K G S +E+ G H F G + I+ +L L
Sbjct: 526 DVTRVRRLMKDKGIRKFPGSSVIEVDGEAHEFLVGDTNHSRNEDIHILLNIL 577
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 194/381 (50%), Gaps = 8/381 (2%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW 97
C + + L QIHA + SGL +D +L ++ F + YA L +P+
Sbjct: 15 CKTIRSLKQIHAHLIASGLLHDEFVLSKVSEFFG-KHIGFVDYAFDFLNQTDLHVGTLPY 73
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N LI YA S P+ A V+ + G P +T+P VLKAC + G+ EG QV K
Sbjct: 74 NTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAVK 133
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
G D+Y N+L+ FY C + A +VFD+M R VVSW +I+ V EA+
Sbjct: 134 MGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINL 193
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
F+KM + P+ T + VL AC +G LS+GK VH + +R + +G AL+DMY K
Sbjct: 194 FLKMDVV---PNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVK 250
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
C + AR LF + + ++ +W+++I GL Q +++LELF +M+ S + P+ + V
Sbjct: 251 CECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSV 310
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT-MADILARAGHLKEAYTFIMNMPFQ 396
L AC G ++ G R+ E GI+ IH T + D+ A+ G ++ A +P
Sbjct: 311 LSACASLGALDYG-RWVQEYIERQGIE-WDIHIGTALVDMYAKCGCIEMALHIFNGIP-N 367
Query: 397 PNPIVLRALLSASSIHDAKYQ 417
N ALL ++H ++
Sbjct: 368 RNIFTWNALLGGLAMHGHGHE 388
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 160/514 (31%), Positives = 261/514 (50%), Gaps = 40/514 (7%)
Query: 35 LKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LK C +K ++ +HAQ G+ A + ++ + + + AR + + ++D
Sbjct: 144 LKACAAKPFYWEAVIVHAQAIKLGMGPHACVQNAILT--AYVACRLILSARQVF-DDISD 200
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
+ WN++I GY+ EA+ +F +M + G++ FT +L A ++ L+ G V
Sbjct: 201 RTIVSWNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFV 260
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER------------------ 193
+ +G++ D N L+ Y C + A VFD M ++
Sbjct: 261 HLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLV 320
Query: 194 -------------SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
+VVSWN II V+ EAV F +M G PD+ T++ +LS C
Sbjct: 321 ENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCC 380
Query: 241 TELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
+ G+L+LGK H + + ++ L +LIDMYAKCGA+ A +F M E NV +W+
Sbjct: 381 SNTGDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWN 440
Query: 301 AMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHV 360
+I LA HG+ EEA+E+F +M+ S + P+ +TF G+L AC+H+G+V+ G YF M
Sbjct: 441 VIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMIST 500
Query: 361 HGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGV 420
I P HY M D+L R G L EA T I MP +P+ +V ALL A I+ +
Sbjct: 501 FRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGACRIYG---NLEI 557
Query: 421 GNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGG 480
++ ++LLEL S V+++N Y+E W+ + +R+ M + G+KK + +S++E+ G
Sbjct: 558 AKQIMKQLLELGRFNSGLYVLLSNMYSESQRWDDMKKIRKIMDDSGIKKCRAISFIEIDG 617
Query: 481 SIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
++F GIY IL+ L H+K + +
Sbjct: 618 CCYQFMVDDKRHCASTGIYSILDQLMDHLKSVGY 651
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/366 (32%), Positives = 191/366 (52%), Gaps = 19/366 (5%)
Query: 34 FLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSV 93
L C S K L +HAQI + GL L +L+ C +L YA + D +
Sbjct: 45 LLDQCSSMKRLKLVHAQIILHGLAAQVVTLGKLLSLCV--QEGDLRYAHLLF-----DQI 97
Query: 94 PIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
P P +N+LIRGY+ S+ P +++ +F M G P +FT+PFVLKACA E +
Sbjct: 98 PQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEAV 157
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
V A K G+ N ++ Y +CR A +VFDD+ +R++VSWN +I +
Sbjct: 158 IVHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKMG 217
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+ EA+ F +M LG E D T++ +LSA ++ NL LG++VHL ++ G ++ +
Sbjct: 218 FCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTN 277
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
ALIDMYAKCG + A+ +F +M + +V +W++M+ A G E A+++F++M
Sbjct: 278 ALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMP----VK 333
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL---KEA 386
N V++ ++C G + FH M + G+ P ++ + G L K+A
Sbjct: 334 NVVSWNSIICCLVQEGQYTEAVELFHRM-CISGVMPDDATLVSILSCCSNTGDLALGKQA 392
Query: 387 YTFIMN 392
+ +I +
Sbjct: 393 HCYICD 398
>gi|347954500|gb|AEP33750.1| chloroplast biogenesis 19, partial [Lepidium sativum]
Length = 494
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 152/474 (32%), Positives = 244/474 (51%), Gaps = 36/474 (7%)
Query: 72 LSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFT 131
L++ KN + N + W + I + DR EA F DM+ GI+P T
Sbjct: 11 LTTRKNNVNPKIQKLNQSTSETIVSWTSRITLLSRDDRLAEAAREFSDMRLAGIEPNHIT 70
Query: 132 YPFVLKACAEISGLNEGMQ--VQANVTKSGLD-SDVYTNNNLVRFY---GSCRRKR---- 181
+ +L AC +E + + K GLD S V ++ Y G R+ R
Sbjct: 71 FISLLSACGNFPSGSEALSDLLHGYACKLGLDRSHVMVGTAILGMYSKRGHVRKARLVFD 130
Query: 182 ------------------------DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
+A KVFD+M ER ++SW +IT V+ + EA+ +
Sbjct: 131 YMEDKNSVTWNTMIDGYMRNGQVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAW 190
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
F +M+ G PD ++ L+ACT LG LS G W H ++ + N ++ +LID+Y +
Sbjct: 191 FREMQISGVNPDYVAIIAALAACTNLGALSFGLWAHRYVVSQDFRNNVRVSNSLIDLYCR 250
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CG V AR +F ME+ V +W+++I+G A +G A E+L F M+ P+ VTF G
Sbjct: 251 CGCVEFARQVFDTMEKRTVVSWNSVIVGFAANGNANESLVYFRKMQEEGFKPDAVTFTGA 310
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
L AC+H G+VE+G++YF M+ + I P H+ + D+ +RAG L++A + +MP +P
Sbjct: 311 LTACSHVGLVEEGFQYFQMMKTDYRISPRIEHFGCLVDLYSRAGRLEDAIKVVESMPMKP 370
Query: 398 NPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSN 457
N +V+ +LL+A H + + + + +L+ +G N VI++N YA G WE S
Sbjct: 371 NEVVIGSLLAACRNHGN--HTILAERLMKHISDLDVKGHSNYVILSNMYAADGKWEGASK 428
Query: 458 VRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
+RR MK +GLKK G S +E+ H F +G ++ VE A I ++LE ++ +++
Sbjct: 429 MRRKMKGLGLKKQPGYSSIEIDDYTHVFMAGDNAHVETAYIREVLEVISYDLRL 482
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 226/409 (55%), Gaps = 3/409 (0%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN ++ GY S++ R+A+ F M GI E T +KA + L +G Q+QA
Sbjct: 1067 WNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAI 1126
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
K G ++D++ ++ ++ Y C +A ++F ++ V+W +I+ +EN A+
Sbjct: 1127 KLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALS 1186
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
+ M+ G +PDE T ++ A + L L GK +H +++ L+ +GT+L+DMY
Sbjct: 1187 VYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYC 1246
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KCG+V A +F +M+ V W+AM+LGLAQHG+ +EAL LF M+++ I P+ VTF+G
Sbjct: 1247 KCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIG 1306
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
VL AC+H+G+ + Y+YF M +GI P HY + D L RAG ++EA I +MPF+
Sbjct: 1307 VLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFK 1366
Query: 397 PNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVS 456
+ + RALL A K V +LL L+P S V+++N YA W+ V+
Sbjct: 1367 ASASMYRALLGACR---TKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVT 1423
Query: 457 NVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+ R MK +KK G SW+++ +H F S + + IY+ +E L
Sbjct: 1424 DARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDL 1472
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 9/213 (4%)
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
++ ++ L G + A + SG D Y NNL+ Y C A +VFD +R +V
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 197 SWNVIITV-------CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
+WN I+ EN+ E F +++ GF T+ +L C G + +
Sbjct: 679 TWNSILAAYAQFADSSYENVL--EGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVS 736
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
+ VH ++ G L+ + AL+++Y K G VG ARLLF +M E + W+ M+ ++
Sbjct: 737 ETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVEN 796
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
+ +EAL FS S P++ V+ N
Sbjct: 797 SFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVN 829
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 123/294 (41%), Gaps = 31/294 (10%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN +++ Y + EA+ F R G P + S L+
Sbjct: 786 WNVMLKAYVENSFQDEALRFFSAFHRSGFXP-------------DFSNLH--------CV 824
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
G++SDV N R + + K A K+F ++ +WN +T + + A+
Sbjct: 825 IGGVNSDVSNN----RKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAID 880
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F + D T++++LSA +L LG+ +H +I+ + +L++MY+
Sbjct: 881 CFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYS 940
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
K G V A F E+++ +W+ MI AQ+ EA+ F ++ + P+ T
Sbjct: 941 KAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLAS 1000
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIH----YHTMADILARAGHLKEA 386
VL AC+ E Y HV+ IK I+ + D+ ++ G + EA
Sbjct: 1001 VLRACSTGD--EGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA 1052
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 143/354 (40%), Gaps = 34/354 (9%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+ HA+I SG D + L+ S +L AR + + +D + WN+++ YA
Sbjct: 632 RAHARIVTSGDLPDRYLTNNLI--TMYSKCGSLCSARQVF-DKSSDRDLVTWNSILAAYA 688
Query: 106 -WSDRPREAVW----VFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGL 160
++D E V +F ++ G T T +LK C + V K G
Sbjct: 689 QFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGF 748
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK 220
+ D++ + LV Y A +FD M ER V WNV++ VEN + EA+ +F
Sbjct: 749 ELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSA 808
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
GF PD + + V+ ++S + H + ++
Sbjct: 809 FHRSGFXPDFSNLHCVIGGVNS--DVSNNRKRHAEQVK---------------------- 844
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
A +F + N++ W+ + G A++ F + S+I + VT + +L A
Sbjct: 845 -AYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSA 903
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
A ++ G + H + P+ +++ ++ ++AG + A +N P
Sbjct: 904 AVGADDLDLGEQ-IHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSP 956
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 139/404 (34%), Positives = 220/404 (54%), Gaps = 9/404 (2%)
Query: 91 DSVPI----PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P+ WN LI GYA + +EA+ +F +M + +KP E T VL ACA+ + +
Sbjct: 193 DEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIE 252
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G QV + + G S++ N L+ Y C A +F+ + + V+SWN +I
Sbjct: 253 LGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYT 312
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER--GTVLN 264
EA+ F +M G P+E TML +L AC LG + +G+W+H+ + +R G
Sbjct: 313 HMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNP 372
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
L T+LIDMYAKCG + A+ +F M ++ +W+AMI G A HG A A ++FS M+
Sbjct: 373 SSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRK 432
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
I P+ +TF+G+L AC+H+GM++ G F M + I P HY M D+L +G K
Sbjct: 433 DGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFK 492
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
EA I +M P+ ++ +LL A +H +G + L+++EP+ S + V+++N
Sbjct: 493 EAEEMINSMEMDPDGVIWCSLLKACKMHG---NVELGESFAQNLIKIEPKNSGSYVLLSN 549
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
YA G W +V+ R + + G+KK+ G S +E+ +H F G
Sbjct: 550 IYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 593
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/400 (33%), Positives = 195/400 (48%), Gaps = 44/400 (11%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSS-KNLTYARSILCNYVN 90
LS L C + + L IHA++ +GL N L +L+ F LS LTYA S+
Sbjct: 6 LSLLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVF----- 60
Query: 91 DSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
DS+ P WN + RG+A S P A+++++ M G+ P +T+PF+LKACA+
Sbjct: 61 DSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFR 120
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS--------- 197
EG Q+ +V K G D D+Y + +L+ Y R DA KVFD R VVS
Sbjct: 121 EGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYA 180
Query: 198 ----------------------WNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLV 235
WN +I+ E EA+ F +M +PDE+TM+
Sbjct: 181 SNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVT 240
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
VLSAC + ++ LG+ VH + + G N ++ ALID+Y KCG V A LF + +
Sbjct: 241 VLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKD 300
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
V +W+ +I G +EAL LF M S SPN VT L +L AC H G ++ G R+ H
Sbjct: 301 VISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIG-RWIH 359
Query: 356 EM--EHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
+ + G+ ++ D+ A+ G ++ A +M
Sbjct: 360 VYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSM 399
>gi|225456719|ref|XP_002268090.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 529
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 154/438 (35%), Positives = 232/438 (52%), Gaps = 16/438 (3%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPWNNLI 101
QIH QI G + + I L+ L + + D +P + WN LI
Sbjct: 100 QIHGQIFKLGFEFEVIIQTALLNLYGL-------FDEDCGLQQIFDEMPQRDLVMWNALI 152
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
YA + P + V DM R +KP T +L C+ + L EG V VTK+ ++
Sbjct: 153 AAYAHGNCPYKVREVSYDMVRSNVKPNGVTAVSILSVCSSLRALREGKAVHGYVTKNLIE 212
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
DV+ +N L+ Y C RDA +VF M R+VVSW +I +N EA+G+F +M
Sbjct: 213 FDVFVHNALIVVYSKCGSIRDAVQVFQLMPMRNVVSWTSLINGYSDNNCPNEALGFFKQM 272
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC-QLGTALIDMYAKCGA 280
+ PDE T+L V+ C++L + LG+W+ +++ G + + AL+DM+AKCG
Sbjct: 273 EAENIRPDEITVLGVVCMCSKLRSFELGEWISQYVVKIGLLKESPAIANALMDMHAKCGN 332
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
+ A +F MEE + +W+ MI GLA HG+ AL F M+ P+ + FL +L A
Sbjct: 333 INRACQIFDGMEEKTIVSWTIMIQGLAMHGHGLSALVRFCQMQREGFKPDSLVFLSLLSA 392
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPI 400
C+HAG+V++G+R F ME + I P HY M DIL RAG + EA+ F+ NMP +P+ I
Sbjct: 393 CSHAGLVDEGWRCFSSMEADYHISPWMEHYGCMVDILCRAGLVDEAFKFVQNMPIKPDMI 452
Query: 401 VLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRR 460
V R LL A + + N+V L EL P+ S++ V+++N +A W+ V VR+
Sbjct: 453 VWRTLLGACH---TQGNISLANQVMNYLCELGPKKSEDYVLLSNLFASNAEWDNVGEVRK 509
Query: 461 FMKNVGLKKMK-GMSWVE 477
M + G+ K G S++E
Sbjct: 510 EMGDRGVTKQDPGCSFIE 527
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 157/331 (47%), Gaps = 1/331 (0%)
Query: 56 LQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVW 115
L N K +V F +++ + AR I + ++ WN +IRGY + P EA+
Sbjct: 7 LHNPTLASKLVVSFASITLPGTTSVARRI-ADQIDGLDTYTWNTIIRGYLEGNDPEEAIL 65
Query: 116 VFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYG 175
V+ ++++G+K +T FV+KAC + EG Q+ + K G + +V L+ YG
Sbjct: 66 VYNHVRKKGLKVDTYTLVFVIKACGLRPVILEGEQIHGQIFKLGFEFEVIIQTALLNLYG 125
Query: 176 SCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLV 235
++FD+M +R +V WN +I + M +P+ T +
Sbjct: 126 LFDEDCGLQQIFDEMPQRDLVMWNALIAAYAHGNCPYKVREVSYDMVRSNVKPNGVTAVS 185
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
+LS C+ L L GK VH + + + + ALI +Y+KCG++ A +F M N
Sbjct: 186 ILSVCSSLRALREGKAVHGYVTKNLIEFDVFVHNALIVVYSKCGSIRDAVQVFQLMPMRN 245
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
V +W+++I G + + EAL F M+ +I P+ +T LGV+C C+ E G
Sbjct: 246 VVSWTSLINGYSDNNCPNEALGFFKQMEAENIRPDEITVLGVVCMCSKLRSFELGEWISQ 305
Query: 356 EMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+ + +K + + D+ A+ G++ A
Sbjct: 306 YVVKIGLLKESPAIANALMDMHAKCGNINRA 336
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 134/404 (33%), Positives = 221/404 (54%), Gaps = 9/404 (2%)
Query: 91 DSVPI----PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P+ WN +I GYA + +EA+ +F DM + ++P E T V+ ACA+ +
Sbjct: 181 DEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIE 240
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G QV + + G S++ N L+ Y C AC +F+ + + V+SWN +I
Sbjct: 241 LGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYT 300
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER--GTVLN 264
EA+ F +M G P++ TML +L AC LG + +G+W+H+ + +R G
Sbjct: 301 HMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANA 360
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
L T+LIDMYAKCG + A +F+ + ++ +W+AMI G A HG A+ + ++FS M+
Sbjct: 361 SSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRK 420
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ I P+ +TF+G+L AC+H+GM++ G F M + + P HY M D+L +G K
Sbjct: 421 NGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFK 480
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
EA I M +P+ ++ +LL A +H +G + L+++EP + V+++N
Sbjct: 481 EAEEMINTMEMEPDGVIWCSLLKACKMHG---NVELGESFAQNLIKIEPENPGSYVLLSN 537
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
YA G W +V+N R + + G+KK+ G S +E+ +H F G
Sbjct: 538 IYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 581
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 122/378 (32%), Positives = 187/378 (49%), Gaps = 36/378 (9%)
Query: 44 LYQIHAQIQVSGLQNDAQILKELVRFCTLSSS-KNLTYARSILCNYVNDSVPIPWNNLIR 102
L IHAQ+ +GL N L +L+ FC LS L YA S+ + + + WN + R
Sbjct: 6 LRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVF-ETIQEPNLLIWNTMFR 64
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
G+A S P A+ +++ M G+ P +T+PF+LK+CA+ EG Q+ +V K G D
Sbjct: 65 GHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDL 124
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS------------------------- 197
D+Y + +L+ Y R DA KVFD+ R VVS
Sbjct: 125 DLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIP 184
Query: 198 ------WNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
WN +I+ E EA+ F M PDE+TM+ V+SAC + G++ LG+
Sbjct: 185 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 244
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
VH + + G N ++ ALID+Y+KCG + A LF + +V +W+ +I G
Sbjct: 245 VHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNL 304
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM--EHVHGIKPMRIH 369
+EAL LF M S +PN VT L +L AC H G ++ G R+ H + + G+
Sbjct: 305 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG-RWIHVYIDKRLKGVANASSL 363
Query: 370 YHTMADILARAGHLKEAY 387
++ D+ A+ G ++ A+
Sbjct: 364 RTSLIDMYAKCGDIEAAH 381
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/422 (33%), Positives = 229/422 (54%), Gaps = 16/422 (3%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRR-GIKPTEFTYPFVLKACAEISGLNEGMQVQANV 155
WN +I GY+ ++ +EA+ +FI M+ G+ T V+ AC + + V
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431
Query: 156 TKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
K GLD D + N L+ Y + A ++F M +R +V+WN +IT V + +A+
Sbjct: 432 VKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDAL 491
Query: 216 GYFVKMKDL-----------GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
KM++L +P+ T++ +L +C L L+ GK +H I+ +
Sbjct: 492 LLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATD 551
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+G+AL+DMYAKCG + +R +F ++ + NV TW+ +I+ HG +EA++L M
Sbjct: 552 VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMV 611
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ PN VTF+ V AC+H+GMV++G R F+ M+ +G++P HY + D+L RAG +K
Sbjct: 612 QGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIK 671
Query: 385 EAYTFIMNMPFQPNPI-VLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
EAY + MP N +LL AS IH+ +G + L++LEP + + V++A
Sbjct: 672 EAYQLMNMMPRDFNKAGAWSSLLGASRIHN---NLEIGEIAAQNLIQLEPNVASHYVLLA 728
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N Y+ G+W+K + VRR MK G++K G SW+E G +H+F +G S + + LE
Sbjct: 729 NIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLE 788
Query: 504 TL 505
TL
Sbjct: 789 TL 790
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 132/262 (50%), Gaps = 7/262 (2%)
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
P W +L+R S+ REAV ++DM GIKP + +P +LKA A++ + G Q+ A
Sbjct: 62 PEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHA 121
Query: 154 NVTKSGLDSD-VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII-TVCVENLWL 211
+V K G D V N LV Y C KVFD + ER+ VSWN +I ++C W
Sbjct: 122 HVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKW- 180
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELG---NLSLGKWVHLQLIERGTVLNCQLG 268
A+ F M D EP T++ V++AC+ L L +GK VH + +G LN +
Sbjct: 181 EMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE-LNSFII 239
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
L+ MY K G + +++L ++ TW+ ++ L Q+ EALE M +
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 329 PNYVTFLGVLCACNHAGMVEDG 350
P+ T VL AC+H M+ G
Sbjct: 300 PDEFTISSVLPACSHLEMLRTG 321
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 168/363 (46%), Gaps = 29/363 (7%)
Query: 46 QIHAQIQVSGLQND----AQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
QIHA + G D A L L R C + + R +++ + WN+LI
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR------ISERNQVSWNSLI 171
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI---SGLNEGMQVQANVTKS 158
++ A+ F M ++P+ FT V+ AC+ + GL G QV A +
Sbjct: 172 SSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK 231
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
G + + + N LV YG + + + R +V+WN +++ +N L EA+ Y
Sbjct: 232 G-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYL 290
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNCQLGTALIDMYAK 277
+M G EPDE T+ VL AC+ L L GK +H ++ G++ N +G+AL+DMY
Sbjct: 291 REMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCN 350
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS-ISPNYVTFLG 336
C V R +F M + + W+AMI G +Q+ + +EAL LF M+ S+ + N T G
Sbjct: 351 CKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAG 410
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVH------GIKPMRIHYHTMADILARAGHLKEAYTFI 390
V+ AC +G F E +H G+ R +T+ D+ +R G + A
Sbjct: 411 VVPACVRSGA-------FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIF 463
Query: 391 MNM 393
M
Sbjct: 464 GKM 466
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 14/229 (6%)
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMK-----------RRGIKPTEFTYPFVLK 137
+ D + WN +I GY +S+ +A+ + M+ R +KP T +L
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 525
Query: 138 ACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS 197
+CA +S L +G ++ A K+ L +DV + LV Y C + + KVFD + +++V++
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 585
Query: 198 WNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG-KWVHLQL 256
WNVII + EA+ M G +P+E T + V +AC+ G + G + ++
Sbjct: 586 WNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM-EEIN-VWTWSAMI 303
+ G + ++D+ + G + A L + M + N WS+++
Sbjct: 646 PDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
RS W ++ V + L EAV +V M LG +PD +L A +L ++ LGK +
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 253 HLQLIERG-TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
H + + G V + + L+++Y KCG G +F R+ E N +W+++I L
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
E ALE F M + ++ P+ T + V+ AC++ M E + H +G++ ++
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG--LMMGKQVHAYGLRKGELNSF 237
Query: 372 TMADILARAGHL 383
+ ++A G L
Sbjct: 238 IINTLVAMYGKL 249
>gi|225445120|ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
[Vitis vinifera]
gi|297738768|emb|CBI28013.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 156/426 (36%), Positives = 221/426 (51%), Gaps = 14/426 (3%)
Query: 56 LQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN-DSVPIPWNNLIRGYAWSDRPREAV 114
+Q+ AQ + + C N A I +++ P WNN+IR Y + A+
Sbjct: 55 IQDTAQTIASHLSKCANLIELNQLLAHIIRTHFLELYPAPFQWNNIIRSYTRLEAHHYAL 114
Query: 115 WVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFY 174
++I M R G+ P +T P VLKA + G QV + + GL+ + Y + + Y
Sbjct: 115 SIYIAMSRAGVSPDSYTIPIVLKAVCQAFATGFGRQVHSVAIRHGLELNEYCESGFISVY 174
Query: 175 GSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTML 234
++A KVF+ R + SWN II + EAV F++M+ GFEPDE TM+
Sbjct: 175 SKAGEFQNAHKVFEQNRFRKLGSWNAIIGGLSQGGRAKEAVTMFMEMRKCGFEPDEVTMV 234
Query: 235 VVLSACTELGNLSLGKWVH-----LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFS 289
V SAC LG+L L +H + ER L +L+DMY KCG + A +FS
Sbjct: 235 SVTSACGSLGHLDLALQLHKCVYQAKTSERSDTLTL---NSLVDMYGKCGRMDLAYRVFS 291
Query: 290 RMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVED 349
RM+E NV +W++MI+G A HG +ALE F M+ + + PN+VTF+GVL AC H G V++
Sbjct: 292 RMDEPNVSSWTSMIVGYAMHGQLYDALECFRCMREAGVRPNHVTFIGVLSACVHGGAVQE 351
Query: 350 GYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSAS 409
G YF M +G+ P HY M D+L RAG L+EA + MP + N IV L+ A
Sbjct: 352 GKYYFDMMTTAYGLVPRMQHYGCMVDLLGRAGLLEEARKMVERMPMKANVIVWGCLMGAC 411
Query: 410 SIHDAKYQD-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLK 468
KY + +G V LLELEP V+++N YA G+W +V VR MK L
Sbjct: 412 E----KYGNVKMGEWVAEHLLELEPWNDGVFVVLSNIYASRGLWREVERVRGVMKERKLD 467
Query: 469 KMKGMS 474
K+ S
Sbjct: 468 KVPAYS 473
>gi|297805646|ref|XP_002870707.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316543|gb|EFH46966.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 517
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 143/419 (34%), Positives = 230/419 (54%), Gaps = 7/419 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRR--GIKPTEFTYPFVLKACAEISGLNEGMQVQ 152
+ WN+LI GYA + V M R G +P E T+ ++ AC EG+ +
Sbjct: 7 VAWNSLISGYAGRGYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIH 66
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
V KSG+ +V N L+ YG +CK+F+D+ +++VSWN +I + ++N
Sbjct: 67 GLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAE 126
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
E + YF + +G +PD+ T L VL C ++G + L + +H ++ G N + TAL+
Sbjct: 127 EGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALL 186
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
D+YAK G + + +F + + W+AM+ A HGY +A++ F M + +SP++V
Sbjct: 187 DLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHV 246
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
TF +L AC+H+G+VE+G YF M + I+P HY M D++ R+G L++AY I
Sbjct: 247 TFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKE 306
Query: 393 MPFQPNPIVLRALLSASSIHDAKYQDG-VGNEVRRRLLELEPRGSQNLVIVANKYAEVGM 451
MP +P+ V ALL A + Y+D +G + +RL ELEPR +N ++++N Y+ G+
Sbjct: 307 MPMEPSSGVWGALLGACRV----YKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGL 362
Query: 452 WEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
W+ S +R MK GL + G S++E G IH+F G S E I + L+ + MK
Sbjct: 363 WKDASRIRNLMKQKGLVRASGYSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMK 421
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 113/225 (50%), Gaps = 4/225 (1%)
Query: 190 MCERSVVSWNVIITVCVENLWLGEAVGYFVKM--KDLGFEPDETTMLVVLSACTELGNLS 247
M ER +V+WN +I+ +LG+ +M ++GF P+E T L ++SAC GN
Sbjct: 1 MPERDLVAWNSLISGYAGRGYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKE 60
Query: 248 LGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA 307
G +H +++ G + ++ AL+++Y K G + + LF + N+ +W+ MI+
Sbjct: 61 EGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHL 120
Query: 308 QHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
Q+G AEE L F+ + + P+ TFL VL C G+V + H + G
Sbjct: 121 QNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLS-QGIHGLIMFCGFNANT 179
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
+ D+ A+ G L+++ T + + P+ + A+L+A + H
Sbjct: 180 CITTALLDLYAKLGRLEDSSTVFLEIT-SPDSMAWTAMLAAYATH 223
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 155/427 (36%), Positives = 235/427 (55%), Gaps = 21/427 (4%)
Query: 95 IPWNNLIRGYAWS-DRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ W ++ A + R +EA+ ++M+R G+ +T+ VL AC L + A
Sbjct: 139 VSWTTVVAALANAPGRKKEALRFLVEMRRDGVAANSYTFSSVLGACGTPGVL---AAMHA 195
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
++ K GLDSDV+ ++L+ Y VFD+M +V WN II ++ G+
Sbjct: 196 DIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIAGFAQS---GD 252
Query: 214 AVG---YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLI--ERGTVLNCQLG 268
VG F++MK+ GF ++ T+ VL ACT + L +G+ VH ++ +R +L+
Sbjct: 253 GVGAMELFMRMKESGFLANQGTLTSVLRACTGMVMLEVGRQVHAHVLKYDRDLILH---- 308
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
AL+DMY KCG + A LFSRM + +V +WS MI GLAQ+G + EAL++F MK +
Sbjct: 309 NALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLAQNGRSVEALKVFDLMKAEGPT 368
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
PN +T +GVL AC+HAG+VEDG+ YF M+ + GI+P R H + M D+L RAG L EA
Sbjct: 369 PNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMK 428
Query: 389 FIMNMPFQPNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYA 447
FI M F+P+ ++ R LL A +H +A E+ L+LEP ++++N YA
Sbjct: 429 FIGEMKFEPDSVIWRTLLGACRMHKNATLASYAATEI----LKLEPEDQGARILLSNIYA 484
Query: 448 EVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNL 507
++ W + M++ G+KK G SW+ELG +H F +G S I Q L L
Sbjct: 485 DLRQWSNAEKSWKTMRDQGVKKEPGRSWIELGKLVHVFIAGELSHPCSDRIVQELNRLIR 544
Query: 508 HMKVLNF 514
K L +
Sbjct: 545 RAKDLGY 551
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 129/290 (44%), Gaps = 17/290 (5%)
Query: 113 AVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT------KSGLDSDVYT 166
A+ + D+ G++ + ++K C + +G + +V+ ++
Sbjct: 50 ALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSLCAHGGGGATHGSLFV 109
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL-GEAVGYFVKMKDLG 225
+N+LV Y DA ++F M +R+VVSW ++ EA+ + V+M+ G
Sbjct: 110 SNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRDG 169
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+ T VL AC G L+ +H +I+ G + + ++LID Y K G + R
Sbjct: 170 VAANSYTFSSVLGACGTPGVLAA---MHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGR 226
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F M ++ W+++I G AQ G A+ELF MK S N T VL AC
Sbjct: 227 GVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMV 286
Query: 346 MVEDGYRYFHEMEHVHGIKPMR--IHYHTMADILARAGHLKEAYTFIMNM 393
M+E G + H H +K R I ++ + D+ + G L +A M
Sbjct: 287 MLEVGRQV-----HAHVLKYDRDLILHNALLDMYCKCGCLLDADALFSRM 331
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 160/490 (32%), Positives = 250/490 (51%), Gaps = 20/490 (4%)
Query: 34 FLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
LK C HL +HAQ+ G D + L+ + + L AR++
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIAL--YAKCRRLGSARTVF----- 177
Query: 91 DSVPIP------WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
+ +P+P W ++ YA + P EA+ +F M++ +KP VL A +
Sbjct: 178 EGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQD 237
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L +G + A+V K GL+ + +L Y C + A +FD M +++ WN +I+
Sbjct: 238 LKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISG 297
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
+N + EA+ F +M + PD ++ +SAC ++G+L + ++ + +
Sbjct: 298 YAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDD 357
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+ +ALIDM+AKCG+V ARL+F R + +V WSAMI+G HG A EA+ L+ M+
Sbjct: 358 VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER 417
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ PN VTFLG+L ACNH+GMV +G+ +F+ M H I P + HY + D+L RAGHL
Sbjct: 418 GGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLD 476
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
+AY I MP QP V ALLSA H +G ++L ++P + + V ++N
Sbjct: 477 QAYEVIKCMPVQPGVTVWGALLSACKKH---RHVELGEYAAQQLFSIDPSNTGHYVQLSN 533
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILET 504
YA +W++V+ VR MK GL K G SWVE+ G + F G S I + +E
Sbjct: 534 LYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEW 593
Query: 505 LNLHMKVLNF 514
+ +K F
Sbjct: 594 IESRLKEGGF 603
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 203/382 (53%), Gaps = 7/382 (1%)
Query: 33 SFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDS 92
S + K L QIHA++ V GLQ ++ +L+ SS ++T+AR + +
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIH--ASSSFGDITFARQVFDDLPRPQ 83
Query: 93 VPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQ 152
+ PWN +IRGY+ ++ ++A+ ++ +M+ + P FT+P +LKAC+ +S L G V
Sbjct: 84 I-FPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVH 142
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC--ERSVVSWNVIITVCVENLW 210
A V + G D+DV+ N L+ Y CRR A VF+ + ER++VSW I++ +N
Sbjct: 143 AQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
EA+ F +M+ + +PD ++ VL+A T L +L G+ +H +++ G + L +
Sbjct: 203 PMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS 262
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
L MYAKCG V A++LF +M+ N+ W+AMI G A++GYA EA+++F M N + P+
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
++ + AC G +E R +E + + D+ A+ G + E +
Sbjct: 323 TISITSAISACAQVGSLEQA-RSMYEYVGRSDYRDDVFISSALIDMFAKCGSV-EGARLV 380
Query: 391 MNMPFQPNPIVLRALLSASSIH 412
+ + +V A++ +H
Sbjct: 381 FDRTLDRDVVVWSAMIVGYGLH 402
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 141/422 (33%), Positives = 229/422 (54%), Gaps = 16/422 (3%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRR-GIKPTEFTYPFVLKACAEISGLNEGMQVQANV 155
WN +I GY+ ++ +EA+ +FI M+ G+ T V+ AC + + V
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431
Query: 156 TKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
K GLD D + N L+ Y + A ++F M +R +V+WN +IT V + +A+
Sbjct: 432 VKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDAL 491
Query: 216 GYFVKMKDL-----------GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
KM++L +P+ T++ +L +C L L+ GK +H I+ +
Sbjct: 492 LLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATD 551
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+G+AL+DMYAKCG + +R +F ++ + NV TW+ +I+ HG +EA++L M
Sbjct: 552 VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMV 611
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ PN VTF+ V AC+H+GMV++G R F+ M+ +G++P HY + D+L RAG +K
Sbjct: 612 QGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIK 671
Query: 385 EAYTFIMNMPFQPNPI-VLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
EAY + MP N +LL AS IH+ +G + L++LEP + + V++A
Sbjct: 672 EAYQLMNMMPRDFNKAGAWSSLLGASRIHN---NLEIGEIAAQNLIQLEPNVASHYVLLA 728
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N Y+ G+W+K + VRR MK G++K G SW+E G +H+F +G S + + LE
Sbjct: 729 NIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLE 788
Query: 504 TL 505
TL
Sbjct: 789 TL 790
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 132/262 (50%), Gaps = 7/262 (2%)
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
P W +L+R S+ REAV ++DM GIKP + +P +LKA A++ + G Q+ A
Sbjct: 62 PEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHA 121
Query: 154 NVTKSGLDSD-VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII-TVCVENLWL 211
+V K G D V N LV Y C KVFD + ER+ VSWN +I ++C W
Sbjct: 122 HVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKW- 180
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELG---NLSLGKWVHLQLIERGTVLNCQLG 268
A+ F M D EP T++ V++AC+ L L +GK VH + +G LN +
Sbjct: 181 EMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE-LNSFII 239
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
L+ MY K G + +++L ++ TW+ ++ L Q+ EALE M +
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 329 PNYVTFLGVLCACNHAGMVEDG 350
P+ T VL AC+H M+ G
Sbjct: 300 PDEFTISSVLPACSHLEMLRTG 321
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 168/363 (46%), Gaps = 29/363 (7%)
Query: 46 QIHAQIQVSGLQND----AQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
QIHA + G D A L L R C + + R +++ + WN+LI
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR------ISERNQVSWNSLI 171
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI---SGLNEGMQVQANVTKS 158
++ A+ F M ++P+ FT V+ AC+ + GL G QV A +
Sbjct: 172 SSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK 231
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
G + + + N LV YG + + + R +V+WN +++ +N L EA+ Y
Sbjct: 232 G-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYL 290
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNCQLGTALIDMYAK 277
+M G EPDE T+ VL AC+ L L GK +H ++ G++ N +G+AL+DMY
Sbjct: 291 REMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCN 350
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS-ISPNYVTFLG 336
C V R +F M + + W+AMI G +Q+ + +EAL LF M+ S+ + N T G
Sbjct: 351 CKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAG 410
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVH------GIKPMRIHYHTMADILARAGHLKEAYTFI 390
V+ AC +G F E +H G+ R +T+ D+ +R G + A
Sbjct: 411 VVPACVRSGA-------FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIF 463
Query: 391 MNM 393
M
Sbjct: 464 GKM 466
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 14/229 (6%)
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMK-----------RRGIKPTEFTYPFVLK 137
+ D + WN +I GY +S+ +A+ + M+ R +KP T +L
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 525
Query: 138 ACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS 197
+CA +S L +G ++ A K+ L +DV + LV Y C + + KVFD + +++V++
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 585
Query: 198 WNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG-KWVHLQL 256
WNVII + EA+ M G +P+E T + V +AC+ G + G + ++
Sbjct: 586 WNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM-EEIN-VWTWSAMI 303
+ G + ++D+ + G + A L + M + N WS+++
Sbjct: 646 PDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
RS W ++ V + L EAV +V M LG +PD +L A +L ++ LGK +
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 253 HLQLIERG-TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
H + + G V + + L+++Y KCG G +F R+ E N +W+++I L
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
E ALE F M + ++ P+ T + V+ AC++ M E + H +G++ ++
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG--LMMGKQVHAYGLRKGELNSF 237
Query: 372 TMADILARAGHL 383
+ ++A G L
Sbjct: 238 IINTLVAMYGKL 249
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 163/485 (33%), Positives = 240/485 (49%), Gaps = 10/485 (2%)
Query: 33 SFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
+ LK C K L Q +HA I S ++D + L+ S L AR +
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS--LEEARKVFEKMP 122
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+ W LI GY+ DRP +A+ F M R G P EFT V+KA A G
Sbjct: 123 QRDF-VTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGH 181
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ K G DS+V+ + L+ Y DA VFD + R+ VSWN +I
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+A+ F M GF P + + AC+ G L GKWVH +I+ G L G
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
L+DMYAK G++ AR +F R+ + +V +W++++ AQHG+ +EA+ F M+ I P
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 361
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
N ++FL VL AC+H+G++++G+ Y+ E+ GI P HY T+ D+L RAG L A F
Sbjct: 362 NEISFLSVLTACSHSGLLDEGWHYY-ELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRF 420
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
I MP +P + +ALL+A +H +G + EL+P VI+ N YA
Sbjct: 421 IEEMPIEPTAAIWKALLNACRMHK---NTELGAYAAEHVFELDPDDPGPHVILYNIYASG 477
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
G W + VR+ MK G+KK SWVE+ +IH F + + + I + E + +
Sbjct: 478 GRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKI 537
Query: 510 KVLNF 514
K L +
Sbjct: 538 KELGY 542
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 148/306 (48%), Gaps = 8/306 (2%)
Query: 119 DMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCR 178
D++ I Y +LK C L +G V A++ +S D+ N L+ Y C
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 179 RKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
+A KVF+ M +R V+W +I+ ++ +A+ +F +M G+ P+E T+ V+
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
A G +H ++ G N +G+AL+D+Y + G + A+L+F +E N +
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
W+A+I G A+ E+ALELF M P++ ++ + AC+ G +E G ++ H
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG-KWVHAYM 288
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD 418
G K + +T+ D+ A++G + +A + + R ++S +S+ A Q
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIF-------DRLAKRDVVSWNSLLTAYAQH 341
Query: 419 GVGNEV 424
G G E
Sbjct: 342 GFGKEA 347
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 142/396 (35%), Positives = 218/396 (55%), Gaps = 5/396 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN++I G+ + AV +F M+ G+ P T + A A+ + G V
Sbjct: 237 VTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCY 296
Query: 155 VTKSGLD-SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+ + G D D+ N +V Y + A ++FD M R VSWN +IT ++N E
Sbjct: 297 MVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASE 356
Query: 214 AVGYFVKM-KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
A+ + M K G +P + T + VL A + LG L G +H I+ G L+ +GT +I
Sbjct: 357 AIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVI 416
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
D+YAKCG + A LLF + + W+A+I G+ HG+ +AL LFS M+ ISP++V
Sbjct: 417 DLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHV 476
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
TF+ +L AC+HAG+V+ G +F+ M+ +GIKP+ HY M D+ RAG L +A+ FI N
Sbjct: 477 TFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRN 536
Query: 393 MPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMW 452
MP +P+ + ALL A IH +G + L EL+P+ V+++N YA+VG W
Sbjct: 537 MPIKPDSAIWGALLGACRIHGNVE---MGKVASQNLFELDPKNVGYYVLMSNMYAKVGKW 593
Query: 453 EKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
+ V VR ++ L+K G S +E+ S++ FYSG
Sbjct: 594 DGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSG 629
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 148/301 (49%), Gaps = 5/301 (1%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN ++ G + R EAV +F M G+ T VL C + + +
Sbjct: 138 WNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAV 197
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
K GLD +++ N ++ YG + KVFD M R +V+WN II+ + + AV
Sbjct: 198 KHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVE 257
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG-TVLNCQLGTALIDMY 275
F M+D G PD T+L + SA + G++ G+ VH ++ RG V + G A++DMY
Sbjct: 258 MFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMY 317
Query: 276 AKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVTF 334
AK + A+ +F M + +W+ +I G Q+G A EA+ ++ +M K+ + P TF
Sbjct: 318 AKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTF 377
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT-MADILARAGHLKEAYTFIMNM 393
+ VL A +H G ++ G R H + G+ + ++ T + D+ A+ G L EA
Sbjct: 378 VSVLPAYSHLGALQQGTR-MHALSIKTGLN-LDVYVGTCVIDLYAKCGKLDEAMLLFEQT 435
Query: 394 P 394
P
Sbjct: 436 P 436
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 110/222 (49%), Gaps = 4/222 (1%)
Query: 130 FTYPFVLKACAEISGLNEGMQVQANVTKSGL-DSDVYTNNNLVRFYGSCRRKRDACKVFD 188
FT+P +L+A G Q+ A + GL D + + LV Y R RDA + FD
Sbjct: 72 FTFPPLLRAA---QGPGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFD 128
Query: 189 DMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSL 248
+M R V +WN +++ N EAVG F +M G D T+ VL C LG+ +L
Sbjct: 129 EMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRAL 188
Query: 249 GKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ 308
+HL ++ G + A+ID+Y K G + R +F M ++ TW+++I G Q
Sbjct: 189 ALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQ 248
Query: 309 HGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
G A+E+F M++S +SP+ +T L + A G + G
Sbjct: 249 GGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGG 290
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 148/411 (36%), Positives = 219/411 (53%), Gaps = 6/411 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W ++++ Y R EA+ VF DM G+ P EF VL AC I GL G Q+ +
Sbjct: 207 VSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSI-GL--GRQLHCS 263
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K L +D+ +N L+ YG + + + + +VSW I+ +N + +A
Sbjct: 264 AIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKA 323
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ +M GF P+ VLS+C ++ +L G H ++ G G ALI+M
Sbjct: 324 IALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINM 383
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG +G ARL F M +V +W+++I G AQHG A +ALE+FS M+++ I P+ TF
Sbjct: 384 YSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTF 443
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
LGVL CNH+GMVE+G +F M + P HY M D+L R G EA I +MP
Sbjct: 444 LGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMP 503
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
F+P+ ++ + LL++ +H + D +G RL+EL R S + V+++N YA G WE
Sbjct: 504 FEPDALIWKTLLASCKLH--RNLD-IGKLAADRLMELSDRDSASYVLMSNIYAMHGEWED 560
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
VRR M G+KK G SW+E+ +H F S S IYQ+L L
Sbjct: 561 ARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGEL 611
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 161/344 (46%), Gaps = 19/344 (5%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +++ GY + RP A+ +F DM G+ P +F L ACA++ L G QV +
Sbjct: 7 VAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSL 66
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
++G D + + L+ Y C A +VFD M VV + +I+ N A
Sbjct: 67 AVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELA 126
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL--GTALI 272
++M G +P+E TM +L+AC + LG+ +H LI++ + + + TALI
Sbjct: 127 AEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALI 182
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
D Y++ G A+ +F + NV +W +M+ + G EEAL++F +M + + PN
Sbjct: 183 DFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEF 242
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHG-IKPMRIHYHTMADILARAGHLKEAYTFIM 391
VL AC G+ R H H I +R+ + + + R G L E ++
Sbjct: 243 ALSIVLGACGSIGL----GRQLHCSAIKHDLITDIRVS-NALLSMYGRTG-LVEELEAML 296
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
N P+ L+S ++ A +Q+G G + L ++ G
Sbjct: 297 NKIENPD------LVSWTTAISANFQNGFGEKAIALLCQMHSEG 334
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 115/277 (41%), Gaps = 5/277 (1%)
Query: 35 LKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP 94
L C S Q+H L D ++ L+ ++ L + N + +
Sbjct: 248 LGACGSIGLGRQLHCSAIKHDLITDIRVSNALL---SMYGRTGLVEELEAMLNKIENPDL 304
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W I + +A+ + M G P + + VL +CA+++ L++GMQ
Sbjct: 305 VSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCL 364
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K G DS++ T N L+ Y C + A FD M V SWN +I ++ +A
Sbjct: 365 ALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKA 424
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA-LID 273
+ F KM+ G +PD++T L VL C G + G+ +I++ + A +ID
Sbjct: 425 LEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMID 484
Query: 274 MYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQH 309
M + G A + + M E + W ++ H
Sbjct: 485 MLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLH 521
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%)
Query: 190 MCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
M ++VV+W +++ N A+ F M + G P++ L AC +LG L G
Sbjct: 1 MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
+ VH + G + +G+ LI+MY++CG++ A+ +F RM+ +V ++++I ++
Sbjct: 61 EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRN 120
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
G E A E M + PN T +L AC
Sbjct: 121 GEFELAAEALIQMLKQGLKPNEHTMTTILTAC 152
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 157/497 (31%), Positives = 255/497 (51%), Gaps = 28/497 (5%)
Query: 39 CSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARS--ILCNYVNDSVPIP 96
CS L + +I L+ D I V + N S ++ + V D
Sbjct: 226 CSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGL 285
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRR-GIKPTEFTYPFVLKACAEISGLNEGMQVQANV 155
WN +I GYA S+ +A+ +FI+M+ G+ T ++ A G++ + V
Sbjct: 286 WNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYV 345
Query: 156 TKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT---VCVEN---- 208
K GL+++ Y N L+ Y + + ++FD M +R +VSWN IIT +C +
Sbjct: 346 IKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDAL 405
Query: 209 LWLGEAV---------GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER 259
L L E G + K + F+P+ T++ VL C L L+ GK +H I
Sbjct: 406 LLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRN 465
Query: 260 GTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELF 319
+G+AL+DMYAKCG + AR +F +M NV TW+ +I+ HG +E+LELF
Sbjct: 466 LLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELF 525
Query: 320 SNM-----KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMA 374
+M K + P VTF+ + +C+H+GMV++G FH+M++ HGI+P HY +
Sbjct: 526 EDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIV 585
Query: 375 DILARAGHLKEAYTFIMNMPFQPNPI-VLRALLSASSIHDAKYQDGVGNEVRRRLLELEP 433
D++ RAG ++EAY + MP + + +LL A I+ + +G LL+L+P
Sbjct: 586 DLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIY---HNIEIGEIAAENLLQLQP 642
Query: 434 RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQV 493
+ + V+++N Y+ G+W+K N+RR MK +G+KK G SW+E G +H+F +G S
Sbjct: 643 DVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHP 702
Query: 494 ELAGIYQILETLNLHMK 510
+ ++ LETL+ +K
Sbjct: 703 QSEKLHDFLETLSERLK 719
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 118/236 (50%), Gaps = 14/236 (5%)
Query: 124 GIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS--DVYTNNNLVRFYGSCRRKR 181
G P F +P VLKA A I L G Q+ A+V K G S V +N LV YG C
Sbjct: 5 GFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLG 64
Query: 182 DACKVFDDMCERSVVSWNVIIT-VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
DA KVFD + ER VSWN II+ +C W A+ F M GFEP T++ + AC
Sbjct: 65 DAYKVFDRITERDQVSWNSIISALCRFEEW-EVAIKAFRLMLMEGFEPSSFTLVSMALAC 123
Query: 241 TEL---GNLSLGKWVHLQLIERG---TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI 294
+ L L LGK +H +G T N AL+ MYAK G + A+ L E+
Sbjct: 124 SNLRKRDGLWLGKQIHGCCFRKGHWRTFSN----NALMAMYAKLGRLDDAKSLLVLFEDR 179
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
++ TW++MI +Q+ EAL M + P+ VTF VL AC+H ++ G
Sbjct: 180 DLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTG 235
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 143/323 (44%), Gaps = 20/323 (6%)
Query: 33 SFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
+ LK + LY QIHA + G + + + + L A + + +
Sbjct: 15 AVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVF-DRI 73
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI---SGLN 146
+ + WN++I + A+ F M G +P+ FT + AC+ + GL
Sbjct: 74 TERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLW 133
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G Q+ + G ++NN L+ Y R DA + +R +V+WN +I+
Sbjct: 134 LGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFS 192
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NC 265
+N EA+ + M G +PD T VL AC+ L L GK +H + V+ N
Sbjct: 193 QNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENS 252
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN- 324
+G+AL+DMY CG V RL+F + + + W+AMI G AQ + E+AL LF M+
Sbjct: 253 FVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAA 312
Query: 325 ----------SSISPNYVTFLGV 337
SSI P YV G+
Sbjct: 313 AGLYSNATTMSSIVPAYVRCEGI 335
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 147/411 (35%), Positives = 213/411 (51%), Gaps = 3/411 (0%)
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
+I GY + +A+ +F + + P T VL ACA ++ LN G ++ AN+ K G
Sbjct: 246 IISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHG 305
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
LD + + ++ Y C R A ++F M E+ V WN IIT C +N EA+ F
Sbjct: 306 LDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFR 365
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+M G D ++ LSAC L L GK +H +I+ +ALIDMY KCG
Sbjct: 366 QMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCG 425
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
+ AR +F M E N +W+++I HG+ E +L LF M I P++VTFL +L
Sbjct: 426 NLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILS 485
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
AC HAG V+ G +YF M +GI HY + D+ RAG L EA+ I NMPF P+
Sbjct: 486 ACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDD 545
Query: 400 IVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVR 459
V LL A +H V + R LL+L+P S V+++N +A+ G W V +R
Sbjct: 546 GVWGTLLGACRVHGNVELAEVAS---RCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIR 602
Query: 460 RFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
MK G++K+ G SW+E+ + H F + S E A IY +L L L ++
Sbjct: 603 SLMKKRGVQKVPGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNLLLELR 653
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 154/324 (47%), Gaps = 3/324 (0%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN ++ G+ P AV VF DM+ KP T+ VL CA + G Q+ V
Sbjct: 41 WNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVI 100
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
G D N LV Y + DA K+F+ M + +VV+WN +I V+N ++ EA
Sbjct: 101 SCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASL 160
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F +M G PD T L + TE +L GK +H ++ G L+ L +ALID+Y
Sbjct: 161 LFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYF 220
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KC VG A +F + +++ +A+I G +G +ALE+F + +SPN VT
Sbjct: 221 KCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLAS 280
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
VL AC + G + H HG+ R + D+ A+ G L AY MP +
Sbjct: 281 VLPACAGLATLNLG-KELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMP-E 338
Query: 397 PNPIVLRALLSASSIHDAKYQDGV 420
+ + A+++ S + K Q+ +
Sbjct: 339 KDAVCWNAIITNCS-QNGKPQEAI 361
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 176/387 (45%), Gaps = 16/387 (4%)
Query: 33 SFLKLCCSK---KHLYQIHAQIQVSGLQNDAQILKELV----RFCTLSSSKNLTYARSIL 85
S L +C S+ + Q+H + G D + LV +F LS + L
Sbjct: 78 SVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLF------ 131
Query: 86 CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL 145
N + D+ + WN +I G+ + EA +F +M G+ P T+ L + E + L
Sbjct: 132 -NTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASL 190
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
+G ++ + + G+ DV+ + L+ Y CR ACK+F +V II+
Sbjct: 191 KQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGY 250
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
V N +A+ F + + P+ T+ VL AC L L+LGK +H +++ G
Sbjct: 251 VLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERR 310
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
+G+A++DMYAKCG + A +F RM E + W+A+I +Q+G +EA++LF M
Sbjct: 311 HVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGRE 370
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
+S + V+ L AC + + G + H + D+ + G+L
Sbjct: 371 GLSYDCVSISAALSACANLPALHHG-KAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSV 429
Query: 386 AYTFIMNMPFQPNPIVLRALLSASSIH 412
A + +M + N + ++++A H
Sbjct: 430 ARC-VFDMMREKNEVSWNSIIAAYGSH 455
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 1/205 (0%)
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
G + D + ++L++ Y DA ++FD M + V WNV++ V+ AV F
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
M++ +P+ T VLS C G +H +I G + + AL+ MY+K
Sbjct: 62 EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
G + A LF+ M + NV TW+ MI G Q+G+ +EA LFS M ++ +SP+ +TF L
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGI 363
+ + ++ G + H HGI
Sbjct: 182 PSVTESASLKQG-KEIHGYILRHGI 205
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 5/272 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
++HA I GL + ++ +L Y + + + + WN +I +
Sbjct: 296 ELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQ---IFRRMPEKDAVCWNAIITNCS 352
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ +P+EA+ +F M R G+ + L ACA + L+ G + + + K DS+V+
Sbjct: 353 QNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVF 412
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
+ L+ YG C A VFD M E++ VSWN II + L ++ F KM + G
Sbjct: 413 AESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDG 472
Query: 226 FEPDETTMLVVLSACTELGNLSLG-KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCA 284
+PD T L +LSAC G + G ++ E G + ++D++ + G + A
Sbjct: 473 IQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEA 532
Query: 285 RLLFSRME-EINVWTWSAMILGLAQHGYAEEA 315
M + W ++ HG E A
Sbjct: 533 FETIKNMPFSPDDGVWGTLLGACRVHGNVELA 564
>gi|224074129|ref|XP_002304264.1| predicted protein [Populus trichocarpa]
gi|222841696|gb|EEE79243.1| predicted protein [Populus trichocarpa]
Length = 499
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 144/410 (35%), Positives = 223/410 (54%), Gaps = 5/410 (1%)
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
S P E +++ +M+++G++ + FV++ I L G QV A + G SD
Sbjct: 2 SSSPTEGFFMYQEMRKKGLRADPVSLSFVIRCYIRICSLIGGEQVHARILSDGHQSDSLL 61
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM--KDL 224
NL+ Y C + +ACKVFD+M +R ++WNV+I+ + N + + F M +L
Sbjct: 62 LTNLMDLYSLCDKGSEACKVFDEMRQRDTIAWNVLISCYMRNRRTRDVLVIFDGMLSGEL 121
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCA 284
G EPD+ T L++L AC LG L G+ VH ++ERG L +LI MY++ G + A
Sbjct: 122 GCEPDDVTCLLLLQACANLGALEFGEKVHGHIVERGYDNATNLCNSLIAMYSQFGNLDKA 181
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA 344
+F M NV TWSA+I GLA +GY EA+ F M + P+ +TF GVL AC++
Sbjct: 182 FGVFKGMHNKNVVTWSAIISGLAMNGYGREAIGAFEEMLKMGVLPDDLTFTGVLSACSNC 241
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRA 404
G+V+ G F M GI P HY M D+L RAG L +AY IM+M +P+ + R
Sbjct: 242 GLVDKGMIIFARMSKEFGIVPNIHHYGCMVDLLGRAGQLHQAYQLIMSMRVKPDSTIWRT 301
Query: 405 LLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKN 464
LL A IH +G V L+EL+ + + + V++ N Y+ V W+KV+ +R+FMK
Sbjct: 302 LLGACRIHRNVI---LGEHVVEHLIELKAQEAGDYVLLFNLYSSVDNWKKVTELRKFMKE 358
Query: 465 VGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
G++ S +EL G +H F S + IY++L+ ++ +K+ +
Sbjct: 359 KGIQTTPASSSIELKGKVHEFVVDDVSHPQKDEIYEMLDEISKQLKIAGY 408
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 124/267 (46%), Gaps = 10/267 (3%)
Query: 32 LSFLKLC----CSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
LSF+ C CS Q+HA+I G Q+D+ +L L+ +L + + +
Sbjct: 27 LSFVIRCYIRICSLIGGEQVHARILSDGHQSDSLLLTNLMDLYSLCDKGS---EACKVFD 83
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDM--KRRGIKPTEFTYPFVLKACAEISGL 145
+ I WN LI Y + R R+ + +F M G +P + T +L+ACA + L
Sbjct: 84 EMRQRDTIAWNVLISCYMRNRRTRDVLVIFDGMLSGELGCEPDDVTCLLLLQACANLGAL 143
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
G +V ++ + G D+ N+L+ Y A VF M ++VV+W+ II+
Sbjct: 144 EFGEKVHGHIVERGYDNATNLCNSLIAMYSQFGNLDKAFGVFKGMHNKNVVTWSAIISGL 203
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLI-ERGTVLN 264
N + EA+G F +M +G PD+ T VLSAC+ G + G + ++ E G V N
Sbjct: 204 AMNGYGREAIGAFEEMLKMGVLPDDLTFTGVLSACSNCGLVDKGMIIFARMSKEFGIVPN 263
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRM 291
++D+ + G + A L M
Sbjct: 264 IHHYGCMVDLLGRAGQLHQAYQLIMSM 290
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 31 CLSFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
CL L+ C + L ++H I G N + L+ S NL A +
Sbjct: 130 CLLLLQACANLGALEFGEKVHGHIVERGYDNATNLCNSLIAM--YSQFGNLDKAFGVFKG 187
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
N +V + W+ +I G A + REA+ F +M + G+ P + T+ VL AC+ +++
Sbjct: 188 MHNKNV-VTWSAIISGLAMNGYGREAIGAFEEMLKMGVLPDDLTFTGVLSACSNCGLVDK 246
Query: 148 GMQVQANVTKS-GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVC 205
GM + A ++K G+ +++ +V G + A ++ M + W ++ C
Sbjct: 247 GMIIFARMSKEFGIVPNIHHYGCMVDLLGRAGQLHQAYQLIMSMRVKPDSTIWRTLLGAC 306
Query: 206 V--ENLWLGE-AVGYFVKMK 222
N+ LGE V + +++K
Sbjct: 307 RIHRNVILGEHVVEHLIELK 326
>gi|449435190|ref|XP_004135378.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77170-like [Cucumis sativus]
Length = 609
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 153/421 (36%), Positives = 223/421 (52%), Gaps = 8/421 (1%)
Query: 58 NDAQILKELVRFCTLSSSKNLTYARSILCNYV-NDSVPIPWNNLIRGYAWSDRPREAVWV 116
+ A+I+ L+ CT +A + N + N WN +IR Y + PR A++V
Sbjct: 187 DHARIVATLLMNCTNVLELYQIHAHVLRTNMLENHPSSFYWNIIIRSYTRLEVPRIALFV 246
Query: 117 FIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGS 176
+IDM R GI P +T P V KA + + G+Q+ + + G + D Y+ + L+ Y
Sbjct: 247 YIDMLRAGILPDCYTLPIVFKALSLAYAFDLGLQLHSVAIRLGFEFDQYSESGLISLYSK 306
Query: 177 CRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVV 236
ACKVF+ R + SWN II + EAV F+K++ G EPD+ T++ V
Sbjct: 307 IGDLECACKVFEQNHNRKLGSWNAIIAGLSQGGRAKEAVNMFIKLRQSGLEPDDFTIVSV 366
Query: 237 LSACTELGNLSLGKWVH---LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEE 293
SAC LGNL L +H Q+ G N + +LIDMY KCG + A +FS M
Sbjct: 367 TSACGSLGNLELSLQMHKFVFQVKVTGKS-NILMLNSLIDMYGKCGRMDLAMKVFSNMGH 425
Query: 294 INVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRY 353
NV +W+++I+G A HG ++ALE F M+ + + PN VTF+GVL AC H GM+ +G Y
Sbjct: 426 RNVSSWTSLIVGYAMHGQVKQALENFQFMREAGVPPNQVTFVGVLSACVHGGMINEGKHY 485
Query: 354 FHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHD 413
F M++V+G KP HY M D+L++AG L+EA I MP + N I+ L+ H
Sbjct: 486 FDMMKNVYGFKPQLPHYGCMVDLLSKAGLLEEARRMIEEMPMKANSIIWGCLIGGCEKHG 545
Query: 414 AKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGM 473
+G + L ELEP V+++N YA GMW++ +R MK L K+ G
Sbjct: 546 ---NVEIGEWAGKHLQELEPWNDGVYVVLSNIYATNGMWKEAQKMRDVMKQRQLAKVPGY 602
Query: 474 S 474
S
Sbjct: 603 S 603
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 260/499 (52%), Gaps = 29/499 (5%)
Query: 31 CLSFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
C S L C S L Q+HA + L ND+ + L+ + LT AR +
Sbjct: 353 CSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDM--YAKCDCLTEARKVFDI 410
Query: 88 YVNDSVPIPWNNLIRGYA-----WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI 142
+ D V + +N +I GY+ W +A+ +F DM+ R I+P+ T+ +L+A A +
Sbjct: 411 FAADDV-VLFNAMIEGYSRLGTQW--ELHDALNIFHDMRFRLIRPSLLTFVSLLRASASL 467
Query: 143 SGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII 202
+ L Q+ + K GL+ D++ + L+ Y +C +D+ VFD+M + +V WN +
Sbjct: 468 TSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMF 527
Query: 203 TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV 262
+ V+ EA+ F++++ PDE T + +++A L +L LG+ H QL++RG
Sbjct: 528 SGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLE 587
Query: 263 LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM 322
N + AL+DMYAKCG+ A F +V W+++I A HG +AL++ M
Sbjct: 588 CNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKM 647
Query: 323 KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGH 382
I PNY+TF+GVL AC+HAG+VEDG + F M GI+P HY M +L RAG
Sbjct: 648 MCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRF-GIEPETEHYVCMVSLLGRAGR 706
Query: 383 LKEAYTFIMNMPFQPNPIVLRALLS----ASSIHDAKYQDGVGNEVRRRLLELEPRGSQN 438
L EA I MP +P IV R+LLS A ++ A+Y + + +P+ S +
Sbjct: 707 LNEARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEYAAEMA-------ILSDPKDSGS 759
Query: 439 LVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGI 498
+++N YA GMW VR MK G+ K G SW+E+ +H F S S + I
Sbjct: 760 FTLLSNIYASKGMWTDAKKVRERMKFEGVVKEPGRSWIEINKEVHIFLSKDKSHCKANQI 819
Query: 499 YQILETLNL----HMKVLN 513
Y++L+ L + HMK++N
Sbjct: 820 YEVLDDLLVQIRGHMKLIN 838
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 147/307 (47%), Gaps = 6/307 (1%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H QI VSGL+ D + L+ S + + YAR + ++ + W+ ++
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNL--YSRAGGMVYARKVFEKMPERNL-VTWSTMVSACNH 122
Query: 107 SDRPREAVWVFIDMKR-RGIKPTEFTYPFVLKACAEISGLNEGM--QVQANVTKSGLDSD 163
E++ VF+D R R P E+ ++AC+ + G M Q+Q+ + KS D D
Sbjct: 123 HGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRD 182
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
VY L+ FY A VFD + E+S V+W +I+ CV+ ++ F ++ +
Sbjct: 183 VYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
PD + VLSAC+ L L GK +H ++ G + L LID Y KCG V
Sbjct: 243 GNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRA 302
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A LF M N+ +W+ ++ G Q+ +EA+ELF++M + P+ +L +C
Sbjct: 303 AHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCAS 362
Query: 344 AGMVEDG 350
+E G
Sbjct: 363 LHALEFG 369
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 148/316 (46%), Gaps = 11/316 (3%)
Query: 33 SFLKLCCS-----KKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
SF++ C + ++Q+ + + S D + L+ F N+ YAR + +
Sbjct: 151 SFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYL--KEGNIDYARLVF-D 207
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+ + + W +I G R ++ +F + + P + VL AC+ + L
Sbjct: 208 ALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEG 267
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G Q+ A++ + G + D N L+ Y C R R A K+FD M ++++SW +++ +
Sbjct: 268 GKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQ 327
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
N EA+ F M G +PD +L++C L L G VH I+ + +
Sbjct: 328 NSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYV 387
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA---EEALELFSNMKN 324
+LIDMYAKC + AR +F +V ++AMI G ++ G +AL +F +M+
Sbjct: 388 TNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRF 447
Query: 325 SSISPNYVTFLGVLCA 340
I P+ +TF+ +L A
Sbjct: 448 RLIRPSLLTFVSLLRA 463
>gi|297723953|ref|NP_001174340.1| Os05g0313600 [Oryza sativa Japonica Group]
gi|222631076|gb|EEE63208.1| hypothetical protein OsJ_18018 [Oryza sativa Japonica Group]
gi|255676232|dbj|BAH93068.1| Os05g0313600 [Oryza sativa Japonica Group]
Length = 620
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 170/517 (32%), Positives = 266/517 (51%), Gaps = 18/517 (3%)
Query: 5 PVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCC----SKKHLYQI-HAQIQVSGLQND 59
PVPT P S+ + A+ FL + +HL + HA ++ L +
Sbjct: 108 PVPT-----PRSASSSKCSAPTSAQTPTRFLSSSSPPPDAPRHLSPVAHALLEKIDLNSH 162
Query: 60 AQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFID 119
+ L+ T+ S + A + N + + WN +++ Y E + D
Sbjct: 163 DHTVHSLI---TIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAYGRVGMNGEVGRMLRD 219
Query: 120 MKRRG-IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCR 178
M + G + P T VL AC + L G V+ +G+++D + LV Y C
Sbjct: 220 MVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETDSLVGSALVGMYEKCG 279
Query: 179 RKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
+A +VFD + ++ VV+WN +IT +N EA+ F MK G PD+ T+ VLS
Sbjct: 280 EIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKKAGVCPDKITLAGVLS 339
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
AC+ +G L LG + RG N +GTAL+DMYAKCG + A +F +M NV +
Sbjct: 340 ACSAVGALELGSELDGYASCRGLYNNVYVGTALVDMYAKCGDLDKAIEVFRKMRCKNVAS 399
Query: 299 WSAMILGLAQHGYAEEALELFSNMKN-SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM 357
W+A+I GLA +G +EA++ F M+N + P+ +TF+GVL AC HAG+V+DG R+F+ +
Sbjct: 400 WNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSACVHAGLVKDGKRWFNSL 459
Query: 358 EHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQ 417
I P HY M D LAR+GHL+E + FI +P + + ++L ALL+A K
Sbjct: 460 TSEFQIIPKIEHYSCMVDPLARSGHLEEVWDFIEKIPDKVDAVMLGALLAA--CRKCKNV 517
Query: 418 DGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVE 477
+ +G V R+++LEP S N V+ + YA G + + +R M+ G+ K G SWVE
Sbjct: 518 E-IGERVINRIIQLEPTNSWNYVVSSKIYASSGRLDDSAKMRGLMRERGVNKTPGCSWVE 576
Query: 478 LGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ G + FY+G + Q +YQ+L+ L M++ +
Sbjct: 577 ISGKVLEFYAGDEPQHGADDMYQVLDLLVDEMRLEGY 613
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 163/485 (33%), Positives = 240/485 (49%), Gaps = 10/485 (2%)
Query: 33 SFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
+ LK C K L Q +HA I S ++D + L+ S L AR +
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS--LEEARKVFEKMP 122
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+ W LI GY+ DRP +A+ F M R G P EFT V+KA A G
Sbjct: 123 QRDF-VTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGH 181
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ K G DS+V+ + L+ Y DA VFD + R+ VSWN +I
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+A+ F M GF P + + AC+ G L GKWVH +I+ G L G
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
L+DMYAK G++ AR +F R+ + +V +W++++ AQHG+ +EA+ F M+ I P
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 361
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
N ++FL VL AC+H+G++++G+ Y+ E+ GI P HY T+ D+L RAG L A F
Sbjct: 362 NEISFLSVLTACSHSGLLDEGWHYY-ELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRF 420
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
I MP +P + +ALL+A +H +G + EL+P VI+ N YA
Sbjct: 421 IEEMPIEPTAAIWKALLNACRMHK---NTELGAYAAEHVFELDPDDPGPHVILYNIYASG 477
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
G W + VR+ MK G+KK SWVE+ +IH F + + + I + E + +
Sbjct: 478 GRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKI 537
Query: 510 KVLNF 514
K L +
Sbjct: 538 KELGY 542
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 144/293 (49%), Gaps = 8/293 (2%)
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
Y +LK C L +G V A++ +S D+ N L+ Y C +A KVF+ M
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
+R V+W +I+ ++ +A+ +F +M G+ P+E T+ V+ A G
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+H ++ G N +G+AL+D+Y + G + A+L+F +E N +W+A+I G A+
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
E+ALELF M P++ ++ + AC+ G +E G ++ H G K + +
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG-KWVHAYMIKSGEKLVAFAGN 301
Query: 372 TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEV 424
T+ D+ A++G + +A + + R ++S +S+ A Q G G E
Sbjct: 302 TLLDMYAKSGSIHDARKIF-------DRLAKRDVVSWNSLLTAYAQHGFGKEA 347
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 141/422 (33%), Positives = 229/422 (54%), Gaps = 16/422 (3%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRR-GIKPTEFTYPFVLKACAEISGLNEGMQVQANV 155
WN +I GY+ ++ +EA+ +FI M+ G+ T V+ AC + + V
Sbjct: 285 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 344
Query: 156 TKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
K GLD D + N L+ Y + A ++F M +R +V+WN +IT V + +A+
Sbjct: 345 VKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDAL 404
Query: 216 GYFVKMKDL-----------GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
KM++L +P+ T++ +L +C L L+ GK +H I+ +
Sbjct: 405 LLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATD 464
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+G+AL+DMYAKCG + +R +F ++ + NV TW+ +I+ HG +EA++L M
Sbjct: 465 VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMV 524
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ PN VTF+ V AC+H+GMV++G R F+ M+ +G++P HY + D+L RAG +K
Sbjct: 525 QGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIK 584
Query: 385 EAYTFIMNMPFQPNPI-VLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
EAY + MP N +LL AS IH+ +G + L++LEP + + V++A
Sbjct: 585 EAYQLMNMMPRDFNKAGAWSSLLGASRIHN---NLEIGEIAAQNLIQLEPNVASHYVLLA 641
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N Y+ G+W+K + VRR MK G++K G SW+E G +H+F +G S + + LE
Sbjct: 642 NIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLE 701
Query: 504 TL 505
TL
Sbjct: 702 TL 703
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 168/363 (46%), Gaps = 29/363 (7%)
Query: 46 QIHAQIQVSGLQND----AQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
QIHA + G D A L L R C + + R +++ + WN+LI
Sbjct: 31 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR------ISERNQVSWNSLI 84
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI---SGLNEGMQVQANVTKS 158
++ A+ F M ++P+ FT V+ AC+ + GL G QV A +
Sbjct: 85 SSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK 144
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
G + + + N LV YG + + + R +V+WN +++ +N L EA+ Y
Sbjct: 145 G-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYL 203
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNCQLGTALIDMYAK 277
+M G EPDE T+ VL AC+ L L GK +H ++ G++ N +G+AL+DMY
Sbjct: 204 REMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCN 263
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS-ISPNYVTFLG 336
C V R +F M + + W+AMI G +Q+ + +EAL LF M+ S+ + N T G
Sbjct: 264 CKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAG 323
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVH------GIKPMRIHYHTMADILARAGHLKEAYTFI 390
V+ AC +G F E +H G+ R +T+ D+ +R G + A
Sbjct: 324 VVPACVRSGA-------FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIF 376
Query: 391 MNM 393
M
Sbjct: 377 GKM 379
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 116/232 (50%), Gaps = 7/232 (3%)
Query: 124 GIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD-VYTNNNLVRFYGSCRRKRD 182
GIKP + +P +LKA A++ + G Q+ A+V K G D V N LV Y C
Sbjct: 5 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64
Query: 183 ACKVFDDMCERSVVSWNVII-TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
KVFD + ER+ VSWN +I ++C W A+ F M D EP T++ V++AC+
Sbjct: 65 VYKVFDRISERNQVSWNSLISSLCSFEKW-EMALEAFRCMLDENVEPSSFTLVSVVTACS 123
Query: 242 EL---GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
L L +GK VH + +G LN + L+ MY K G + +++L ++ T
Sbjct: 124 NLPMPEGLMMGKQVHAYGLRKGE-LNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVT 182
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
W+ ++ L Q+ EALE M + P+ T VL AC+H M+ G
Sbjct: 183 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTG 234
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 14/229 (6%)
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMK-----------RRGIKPTEFTYPFVLK 137
+ D + WN +I GY +S+ +A+ + M+ R +KP T +L
Sbjct: 379 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 438
Query: 138 ACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS 197
+CA +S L +G ++ A K+ L +DV + LV Y C + + KVFD + +++V++
Sbjct: 439 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 498
Query: 198 WNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG-KWVHLQL 256
WNVII + EA+ M G +P+E T + V +AC+ G + G + ++
Sbjct: 499 WNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 558
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM-EEIN-VWTWSAMI 303
+ G + ++D+ + G + A L + M + N WS+++
Sbjct: 559 PDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 607
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG-TVLNCQLGTALIDMYAKCGAVG 282
LG +PD +L A +L ++ LGK +H + + G V + + L+++Y KCG G
Sbjct: 4 LGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFG 63
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
+F R+ E N +W+++I L E ALE F M + ++ P+ T + V+ AC+
Sbjct: 64 AVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACS 123
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+ M E + H +G++ ++ + ++A G L
Sbjct: 124 NLPMPEG--LMMGKQVHAYGLRKGELNSFIINTLVAMYGKL 162
>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
Length = 834
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 141/421 (33%), Positives = 227/421 (53%), Gaps = 13/421 (3%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I ++ + + +M R G++ +FTY VLKACA + L G+ V
Sbjct: 398 VSWNTIIAALEQNECYEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGK 457
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
KSGL D + ++ +V Y C +A K+ D + + +VSWN II N EA
Sbjct: 458 AIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEA 517
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+F +M D+G +PD T VL +C L + LGK +H Q+I++ + + + + L+DM
Sbjct: 518 QKFFSEMLDMGVKPDHFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDM 577
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG + ++L+F ++++++ +W+AMI G A HG EALE+F + ++++PN+ TF
Sbjct: 578 YAKCGNMPDSQLMFEKVQKLDFVSWNAMICGYALHGQGFEALEMFERTQKANVAPNHATF 637
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ VL AC+H G+++DG RYFH M + ++P H+ M +EA FI +MP
Sbjct: 638 VAVLRACSHVGLLDDGCRYFHLMTSRYKLEPQLEHFACMGP--------QEALKFIRSMP 689
Query: 395 FQPNPIVLRALLSASSIHDAKYQD-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
+ + ++ + LLS I QD V +L L+P S ++++N YAE G W
Sbjct: 690 LEADAVIWKTLLSICKIR----QDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWV 745
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLN 513
VS RR M+ LKK G SW+E+ +H F G +Y++L L MK+
Sbjct: 746 DVSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLVGEKVHPRSREVYEMLNNLICEMKLSG 805
Query: 514 F 514
+
Sbjct: 806 Y 806
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 126/263 (47%), Gaps = 24/263 (9%)
Query: 81 ARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACA 140
A S+LC + D + WN L+ GY R+ V + I+M R G+ P T +LKAC
Sbjct: 116 ATSLLC-VMPDPDVVSWNALLSGYCQRGMFRDLVGLSIEMARCGVAPDRTTLAVLLKACG 174
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
+ L G+Q+ A K+GL+ DV + LV YG CR DA F M ER+ VSW
Sbjct: 175 GLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMGERNSVSWGA 234
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTM--LVVLSACTELGNLSLGKWVHLQLIE 258
+I CV+N E M L +L C + LS + +H I+
Sbjct: 235 VIAGCVQN---------------------EQYMRGLELLCRCKAITCLSTARQLHAHAIK 273
Query: 259 RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALEL 318
+ +GTA++D+YAK ++ AR F + V T +AM++GL + G EA++L
Sbjct: 274 NKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGAEAMQL 333
Query: 319 FSNMKNSSISPNYVTFLGVLCAC 341
F M S I V+ GV AC
Sbjct: 334 FQFMTRSGIGFGVVSLSGVFSAC 356
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 165/366 (45%), Gaps = 40/366 (10%)
Query: 27 KARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILC 86
KA CLS + Q+HA + +D + +V + + +L AR
Sbjct: 256 KAITCLSTAR---------QLHAHAIKNKFSSDRVVGTAIVD--VYAKADSLVDARRAFF 304
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
N +V N ++ G + EA+ +F M R GI + V ACAE+ G
Sbjct: 305 GLPNHTVET-CNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVKGF- 362
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
D DV N ++ YG C+ +A VF +M +R VSWN II
Sbjct: 363 --------------DVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALE 408
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+N + + + +M G E D+ T VL AC L +L G VH + I+ G L+
Sbjct: 409 QNECYEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAF 468
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+ + ++DMY KCG + A L R+ + +W+++I G + + +EEA + FS M +
Sbjct: 469 VSSTVVDMYCKCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMG 528
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG--IKPMRIH----YHTMADILARA 380
+ P++ T+ VL +C + +E G + +HG IK + T+ D+ A+
Sbjct: 529 VKPDHFTYATVLDSCANLATIELG-------KQIHGQIIKQEMLGDEFISSTLVDMYAKC 581
Query: 381 GHLKEA 386
G++ ++
Sbjct: 582 GNMPDS 587
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 127/321 (39%), Gaps = 66/321 (20%)
Query: 109 RPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNN 168
RP A F+ F++ + L A A S L G A + SG ++ +N
Sbjct: 18 RPTPAQAAFL-------ATATFSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSN 70
Query: 169 NLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT--------------VCV-------- 206
L++ Y C A VFD M R VSWN ++T +CV
Sbjct: 71 CLLQMYARCGGAAHAHGVFDTMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVS 130
Query: 207 ---------ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLI 257
+ + VG ++M G PD TT+ V+L AC L +L+LG +H +
Sbjct: 131 WNALLSGYCQRGMFRDLVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAV 190
Query: 258 ERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALE 317
+ G ++ + G+AL+DMY KC ++ A F M E N +W A+I G Q+
Sbjct: 191 KTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMGERNSVSWGAVIAGCVQN-------- 242
Query: 318 LFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIK----PMRIHYHTM 373
Y+ L +LC C + + H H IK R+ +
Sbjct: 243 -----------EQYMRGLELLCRCKAITCLSTARQL-----HAHAIKNKFSSDRVVGTAI 286
Query: 374 ADILARAGHLKEAYTFIMNMP 394
D+ A+A L +A +P
Sbjct: 287 VDVYAKADSLVDARRAFFGLP 307
>gi|347954496|gb|AEP33748.1| chloroplast biogenesis 19, partial [Capsella bursa-pastoris]
Length = 489
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 147/459 (32%), Positives = 235/459 (51%), Gaps = 36/459 (7%)
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
N + W + I + R EA F DM+ G++P T+ +L C + S +
Sbjct: 18 NQSTSETIVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGCGDFSSGS 77
Query: 147 EGM----------------------------QVQANVTKSGL------DSDVYTNNNLVR 172
E + + V K+ L D + T N ++
Sbjct: 78 EALGDLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSVTWNTMID 137
Query: 173 FYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETT 232
Y + +A K+FD M ER ++SW +I V+ + EA+ +F +M+ G +PD
Sbjct: 138 GYMRNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVA 197
Query: 233 MLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME 292
++ L+ACT LG LS G WVH ++ + N ++ +LID+Y +CG V AR +F +ME
Sbjct: 198 IIAALNACTNLGALSFGLWVHRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFAREVFDKME 257
Query: 293 EINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR 352
+ V +W+++I+G A +G A E+L F M+ P+ VTF G L AC+H G+VE+G R
Sbjct: 258 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLR 317
Query: 353 YFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
YF M+ H I P HY + D+ +RAG L+EA + +MP +PN +V+ +LL+A H
Sbjct: 318 YFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEEALKVVQSMPMKPNEVVIGSLLAACRTH 377
Query: 413 DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKG 472
+ + + L ++ +G N VI++N YA G WE S +RR MK +GLKK G
Sbjct: 378 GNNTV--LAERLMKHLSDVNVKGHSNYVILSNMYAADGKWEGASQMRRKMKGLGLKKQPG 435
Query: 473 MSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
S +E+ H F +G + VE A I ++LE ++ +++
Sbjct: 436 FSSIEIDDCTHVFMAGDSAHVETADIREVLELVSSDLQL 474
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 162/465 (34%), Positives = 243/465 (52%), Gaps = 6/465 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+H + +G+ +L LV + NL Y+ +L +D I W+ LI GY+
Sbjct: 234 QVHCVVVKNGVLEFVSVLNALVTM--YAKCGNLNYSL-MLFEMCSDKNAITWSALITGYS 290
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ +A+ +F M G P+EFT VLKAC++++ + EG Q + KSG ++ +Y
Sbjct: 291 QAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIY 350
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
T LV Y DA K FD + E +V W II V+N EA+ + +M+
Sbjct: 351 TATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRK 410
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
P+E TM VL AC+ L L GK +H + I+ G + +AL MYAKCG++
Sbjct: 411 ILPNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGV 470
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
L+F RM + ++ +W+AMI GL+Q+G+ EALELF M+ P+++TF+ VL AC+H G
Sbjct: 471 LIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMG 530
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+V+ G+ YF+ M + P HY M D+L+RAG L EA FI + + R L
Sbjct: 531 IVKRGWAYFNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMCLWRIL 590
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
L A H Y+ +G +L+EL R S V++++ Y +G V VRR MK
Sbjct: 591 LPACRNH-CNYE--LGAYAGEKLMELGSRESSAYVLLSSIYTAMGRLADVVRVRRMMKVR 647
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
G++K G SW+EL +H F G ++ I + L HMK
Sbjct: 648 GVRKETGCSWIELKSHVHVFVVGDQIHPQIEEIQGAIWRLRKHMK 692
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 189/396 (47%), Gaps = 20/396 (5%)
Query: 47 IHAQI-QVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+HA I ++ L + + L++F + +L A+ + N + +V + +N LI G +
Sbjct: 29 LHAHIIKIPYLSSCNYLANNLIKF--YAKCGHLHGAKLVFENLKHKNV-VSYNCLIHGLS 85
Query: 106 --WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN-EGMQVQANVTKSGLDS 162
S + +F M I P T+P V A A G N + QV K+
Sbjct: 86 HNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALNLGCNFDARQVHVLGIKTASID 145
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
DV+ ++LV FY +A K+FD M ER++VSW +I+ EA+G F M+
Sbjct: 146 DVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMR 205
Query: 223 DLGFEPDETTMLVVLSA--CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
+ +E VLSA C E + GK VH +++ G + + AL+ MYAKCG
Sbjct: 206 LVEGNLNEFVFTSVLSALVCPEF--VDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGN 263
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
+ + +LF + N TWSA+I G +Q G + +AL+LFS M + P+ T +GVL A
Sbjct: 264 LNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKA 323
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILAR---AGHLKEAYTFIMNMPFQP 397
C+ +E+G + H G + + D+ A+ G ++ + F++ +P
Sbjct: 324 CSDVAAIEEG-KQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLL----EP 378
Query: 398 NPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP 433
+ +VL + A + + K ++ + R ++ ++ P
Sbjct: 379 D-LVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILP 413
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 152/451 (33%), Positives = 226/451 (50%), Gaps = 34/451 (7%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I GY+ + + ++ +MK G +P VL ACA L+ G +
Sbjct: 183 VTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQF 242
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRK-------------------------------RDA 183
+ +G + +LV Y +C +DA
Sbjct: 243 IKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDA 302
Query: 184 CKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
+FD M E+ +V W+ +I+ E+ EA+ F +M+ PD+ TML V+SAC +
Sbjct: 303 RFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANV 362
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
G L KW+H + G + ALIDMYAKCG + AR +F M NV +WS+MI
Sbjct: 363 GALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMI 422
Query: 304 LGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
A HG A+ A+ LF MK +I PN VTF+GVL AC+HAG+VE+G ++F M + H I
Sbjct: 423 NAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRI 482
Query: 364 KPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNE 423
P R HY M D+ RA HL++A I MPF PN I+ +L+SA H + +G
Sbjct: 483 SPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHG---EIELGEF 539
Query: 424 VRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIH 483
RLLELEP LV+++N YA+ W+ V VR+ MK+ G+ K K S +E+ +H
Sbjct: 540 AATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVH 599
Query: 484 RFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
F + IY+ L+ + +K++ +
Sbjct: 600 VFMMADRYHKQSDEIYKKLDAVVSQLKLVGY 630
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 213/438 (48%), Gaps = 41/438 (9%)
Query: 34 FLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKN---LTYARSILCNYVN 90
L C + +H+ QIHAQI S + N +L +LV C S + L YA S+ + N
Sbjct: 18 LLASCKTLRHVKQIHAQILRSKMDNSNLLLLKLVLCCCTLPSPSPSALDYALSLFSHIPN 77
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
N L+R ++ P + +++ ++R G F++P +LKA +++S LN G++
Sbjct: 78 PPTRFS-NQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLE 136
Query: 151 VQANVTKSGL-DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
+ +K G +D + + L+ Y +C R DA +FD M R VV+WN++I +N
Sbjct: 137 IHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNA 196
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+ + +MK G EPD + VLSAC GNLS GK +H + + G + + T
Sbjct: 197 HYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQT 256
Query: 270 ALIDMYAKCGA-------------------------------VGCARLLFSRMEEINVWT 298
+L++MYA CGA V AR +F RM E ++
Sbjct: 257 SLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVC 316
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
WSAMI G A+ EAL+LF+ M+ I P+ +T L V+ AC + G + ++ H
Sbjct: 317 WSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQA-KWIHTYA 375
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH-DAKYQ 417
+G + + D+ A+ G+L +A NMP + N I ++++A ++H DA
Sbjct: 376 DKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMP-RKNVISWSSMINAFAMHGDADSA 434
Query: 418 DGVGNEVRRRLLELEPRG 435
+ + ++ + +EP G
Sbjct: 435 IALFHRMKEQ--NIEPNG 450
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 152/420 (36%), Positives = 223/420 (53%), Gaps = 5/420 (1%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN + R +A+ FI+ + G +P T+ L ACA S L G Q+ V
Sbjct: 177 WNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVL 236
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
+SG ++DV N L+ FYG C + + +F + + + VSW +I V+N +A
Sbjct: 237 QSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACL 296
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F++ + G EP + + VLSAC L L +GK VH ++ V N +G+AL+DMY
Sbjct: 297 VFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYG 356
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS--ISPNYVTF 334
KCG++ A F M E N+ TW+AMI G A G A+ A+ LF M S ++PNYVTF
Sbjct: 357 KCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTF 416
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ VL AC+ AG V G F M +GI+P HY + D+L RAG +++AY FI MP
Sbjct: 417 VCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMP 476
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
+P V ALL AS + + +G L EL+P S N V+++N +A G WE+
Sbjct: 477 IRPTVSVWGALLGASKMFG---KSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEE 533
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ VR+ MK+VG+KK G SW+ G ++H F + S + I +L L M+ +
Sbjct: 534 ATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGY 593
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 142/300 (47%), Gaps = 1/300 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W LI G + R A++ F +M+R I+P +FT+P KA + G QV A
Sbjct: 74 VTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHAL 133
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K+G SDV+ + Y +A K+FD+M ER++ +WN ++ V +A
Sbjct: 134 AVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDA 193
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F++ + G+EP+ T L+AC L LG+ +H +++ G + + LID
Sbjct: 194 LTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDF 253
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y KC VGC+ ++FS + + N +W +MI+ Q+ E+A +F + I P
Sbjct: 254 YGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMV 313
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
VL AC ++E G + H + + + D+ + G +++A MP
Sbjct: 314 SSVLSACAGLSVLEVG-KSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMP 372
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 10/288 (3%)
Query: 33 SFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
+FL C +L Q+H + SG + D + L+ F + I+ + +
Sbjct: 214 AFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCS---EIIFSGI 270
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+ + W ++I Y +D +A VF+ ++ GI+PT+F VL ACA +S L G
Sbjct: 271 SKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGK 330
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
V K+ + +++ + LV YG C DA + FD+M ER++V+WN +I
Sbjct: 331 SVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQG 390
Query: 210 WLGEAVGYFVKMK--DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER-GTVLNCQ 266
AV F +M P+ T + VLSAC+ G++++G + + R G +
Sbjct: 391 QADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAE 450
Query: 267 LGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAE 313
++D+ + G V A +M V W A++ G +E
Sbjct: 451 HYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSE 498
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 4/210 (1%)
Query: 148 GMQVQANVTKSGLDSDV--YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
G A + K+ LD+ + + N+LV Y R A + RSVV+W +I
Sbjct: 25 GRAAHAQIIKT-LDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGS 83
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
V+N A+ +F M+ +P++ T A L + +GK VH ++ G + +
Sbjct: 84 VQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDV 143
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
+G + DMY+K G AR +F M E N+ TW+A + G ++AL F ++
Sbjct: 144 FVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHE 203
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
PN +TF L AC A + G R H
Sbjct: 204 GWEPNLITFCAFLNACAGASYLRLG-RQLH 232
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 159/471 (33%), Positives = 248/471 (52%), Gaps = 16/471 (3%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSS-SKNLTYARSILCNYVNDSVPIPWNNLIRGY 104
Q+H+ G +DA + LV S+ + + YA + + V I W LI GY
Sbjct: 275 QLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDV-ISWTALISGY 333
Query: 105 AWSDRPREAVWV-FIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD 163
S V V F +M IKP TY +LKACA IS + G QV A+V KS +
Sbjct: 334 VQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAA 393
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
N LV Y +A +VF+ + ERS++S C+ + + + D
Sbjct: 394 HTVGNALVSMYAESGCMEEARRVFNQLYERSMIS-------CITE-GRDAPLDHRIGRMD 445
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
+G +T ++SA +G L+ G+ +H ++ G + + +L+ MY++CG +
Sbjct: 446 MGIS--SSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLED 503
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A F+ +++ NV +W++MI GLA+HGYAE AL LF +M + + PN VT++ VL AC+H
Sbjct: 504 ACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSH 563
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
G+V +G YF M+ HG+ P HY M D+LAR+G +KEA FI MP + + +V +
Sbjct: 564 VGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWK 623
Query: 404 ALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMK 463
LL A HD VG + ++ELEPR V+++N YA+ G+W++V+ +R M+
Sbjct: 624 TLLGACRSHD---NIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMR 680
Query: 464 NVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ L K G+SW+E+ + H F +G S IY L+TL +K + +
Sbjct: 681 DNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVGEIKGMGY 731
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 150/303 (49%), Gaps = 17/303 (5%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKAC--AEISGLNEGMQVQ 152
+ W + A + RE++ + +M G+ P +T V AC E+ G V
Sbjct: 117 VSWTAMASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELY-CLVGGVVL 175
Query: 153 ANVTKSGL-DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
V K GL +D+ + L+ A KVFD + E++VV W ++I+ V+
Sbjct: 176 GLVHKMGLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECA 235
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
EAV F+ + GFEPD TM ++SACTELG++ LG +H + G + + L
Sbjct: 236 EEAVEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGL 295
Query: 272 IDMYAKCG---AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE-EALELFSNMKNSSI 327
+DMYAK A+ A +F RM + +V +W+A+I G Q G E + + LF M N SI
Sbjct: 296 VDMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESI 355
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL----ARAGHL 383
PN++T+ +L AC + + G + H H IK + HT+ + L A +G +
Sbjct: 356 KPNHITYSSILKACANISDHDSGRQV-----HAHVIKSNQAAAHTVGNALVSMYAESGCM 410
Query: 384 KEA 386
+EA
Sbjct: 411 EEA 413
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 85/204 (41%), Gaps = 23/204 (11%)
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVCVENLWLGEAVGYF 218
LD D N+L+ Y C A VFD M R +VSW + + N E++
Sbjct: 80 LDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLI 139
Query: 219 VKMKDLGFEPDETTMLVVLSAC------------TELGNLSLGKWVHLQLIERGTVLNCQ 266
+M + G P+ T+ V AC +G W GT +
Sbjct: 140 GEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLW--------GT--DIA 189
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+G+ALIDM A+ G + AR +F + E V W+ +I Q AEEA+E+F +
Sbjct: 190 VGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDG 249
Query: 327 ISPNYVTFLGVLCACNHAGMVEDG 350
P+ T ++ AC G V G
Sbjct: 250 FEPDRYTMSSMISACTELGSVRLG 273
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 244 GNLSLGKWVHLQLIERGTVLN--CQLGTALIDMYAKCGAVGCARLLFSRMEEI-NVWTWS 300
G+L LG+ +H +L+ RG +L+ + +L+ +Y++CGAV AR +F M + ++ +W+
Sbjct: 62 GDLRLGRALHRRLL-RGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWT 120
Query: 301 AMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
AM LA++G E+L L M S + PN T V AC
Sbjct: 121 AMASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHAC 161
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 152/463 (32%), Positives = 237/463 (51%), Gaps = 6/463 (1%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
IH +I LQ+ I L+ + N YA SI V + W ++I G+
Sbjct: 364 IHTEIVKRPLQSSITIQSALLTMYSKFGDSN--YANSIFSTMKERDV-VAWGSVISGFCQ 420
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+ + +EA+ F M+ +KP ++ AC + ++ G + V KSGL DV+
Sbjct: 421 NRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFV 480
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
++L+ Y A +F DM +++V+WN II+ N ++ F ++
Sbjct: 481 ASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDL 540
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
PD + VL+A + + L GK VH L+ + Q+ LIDMY KCG + A+
Sbjct: 541 YPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQH 600
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
+F R+ E N+ W++MI G HG +A+ELF M++S I P+ VTFL +L +CNH+G+
Sbjct: 601 IFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGL 660
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALL 406
+E+G F M+ GI+P HY + D+ RAG L +AY+F+ NMP +P+ + +LL
Sbjct: 661 IEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLL 720
Query: 407 SASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVG 466
+ IH +G V +LL +EP N V + N Y E +W++ +N+R MK G
Sbjct: 721 CSCKIH---LNLELGEMVANKLLNMEPSKGSNYVQLLNLYGEAELWDRTANLRASMKEKG 777
Query: 467 LKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
LKK G SW+E+ + FYSG S IY L +L +M
Sbjct: 778 LKKTPGCSWIEVRNKVDVFYSGDCSSPITTEIYDTLSSLKRNM 820
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 165/351 (47%), Gaps = 3/351 (0%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIH+ I + L D + L+ T T AR + + S + WN +I G+
Sbjct: 160 QIHSYIVRNMLNFDPFLETALID--TYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFG 217
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ ++ ++ K +K ++ L AC + ++ G QV + K G + D Y
Sbjct: 218 ENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPY 277
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
+ +L+ YG C+ A KVF+++ ++ + WN +I+ V N + +A+ + +MK
Sbjct: 278 VHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCT 337
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
D T+L VL++ + G LG+ +H ++++R + + +AL+ MY+K G A
Sbjct: 338 VLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYAN 397
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+FS M+E +V W ++I G Q+ +EAL+ F M+ + P+ ++ AC
Sbjct: 398 SIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLE 457
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
V+ G H G++ ++ D+ ++ G + A +MP +
Sbjct: 458 KVDLGCT-IHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLK 507
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 155/347 (44%), Gaps = 16/347 (4%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+H G ++D + L+ T+ + + + N V D WN LI Y
Sbjct: 262 QVHCDAIKVGFEDDPYVHTSLL---TMYGKCQMIESAEKVFNEVPDKEIELWNALISAYV 318
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ +A+ ++ MK + FT VL + + + G + + K L S +
Sbjct: 319 GNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSIT 378
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
+ L+ Y A +F M ER VV+W +I+ +N EA+ +F M+
Sbjct: 379 IQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADL 438
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+PD M ++SACT L + LG +H +I+ G L+ + ++L+DMY+K G A
Sbjct: 439 VKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAG 498
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+FS M N+ W+++I ++ + ++ LFS + + + P+ V+F VL A +
Sbjct: 499 NIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVA 558
Query: 346 MVEDGYRYFHEMEHVHGIK-----PMRIHY-HTMADILARAGHLKEA 386
+ G + VHG P + +T+ D+ + G LK A
Sbjct: 559 ALLKG-------KSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYA 598
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 156/361 (43%), Gaps = 47/361 (13%)
Query: 2 VRFPVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLY---QIHAQIQVSGLQN 58
+ PV TT +P S LK C S +L IH+ I +GL +
Sbjct: 45 TKSPVYTTRFTYP------------------SLLKACASLSNLQYGKTIHSSIITTGLHS 86
Query: 59 DAQILKELVRF---CTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVW 115
D I L+ C + + + D V I WN++I GY + E +
Sbjct: 87 DQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTI-WNSIIDGYFRFGQLEEGMV 145
Query: 116 VFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYG 175
F M+ G K EG Q+ + + ++ L+ D + L+ Y
Sbjct: 146 QFGRMQSSGYK--------------------EGKQIHSYIVRNMLNFDPFLETALIDTYF 185
Query: 176 SCRRKRDACKVFDDMCERS-VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTML 234
C R +A +F + +RS +V+WNV+I EN ++ Y++ K + ++
Sbjct: 186 KCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFT 245
Query: 235 VVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI 294
LSAC + +S GK VH I+ G + + T+L+ MY KC + A +F+ + +
Sbjct: 246 CTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDK 305
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYF 354
+ W+A+I +GYA +AL ++ MK ++ + T L VL + + AG+ + G R
Sbjct: 306 EIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLG-RLI 364
Query: 355 H 355
H
Sbjct: 365 H 365
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 155/459 (33%), Positives = 229/459 (49%), Gaps = 9/459 (1%)
Query: 33 SFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S LK C L QIH+QI + Q +A + L+ + L A IL +
Sbjct: 455 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDM--YAKLGKLDTAWDILIRFA 512
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
V + W +I GY + +A+ F M RGI+ E + ACA + L EG
Sbjct: 513 GKDV-VSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQ 571
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ A SG SD+ N LV Y C + ++ F+ ++WN +++ ++
Sbjct: 572 QIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSG 631
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
EA+ FV+M G + + T + A +E N+ GK VH + + G ++
Sbjct: 632 NNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCN 691
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
ALI MYAKCG++ A F + N +W+A+I ++HG+ EAL+ F M +S++ P
Sbjct: 692 ALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRP 751
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
N+VT +GVL AC+H G+V+ G YF M +G+ P HY + D+L RAG L A F
Sbjct: 752 NHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEF 811
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
I MP +P+ +V R LLSA +H +G LLELEP S V+++N YA
Sbjct: 812 IQEMPIKPDALVWRTLLSACVVHKNME---IGEFAAHHLLELEPEDSATYVLLSNLYAVS 868
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
W+ R+ MK G+KK G SW+E+ SIH FY G
Sbjct: 869 KKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVG 907
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 162/357 (45%), Gaps = 26/357 (7%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPI----PWNNLI 101
QIHA+I GL++ + L+ + + +L AR + D + + W +I
Sbjct: 168 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDL--ARRVF-----DGLRLKDHSSWVAMI 220
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
G + ++ EA+ +F DM GI PT + + VL AC +I L G Q+ V K G
Sbjct: 221 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 280
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
SD Y N LV Y A +F +M +R V++N +I + + +A+ F +M
Sbjct: 281 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 340
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
G EPD T+ ++ AC+ G L G+ +H + G N ++ AL+++YAKC +
Sbjct: 341 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADI 400
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
A F E NV W+ M++ + +F M+ I PN T+ +L C
Sbjct: 401 ETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 460
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYH-------TMADILARAGHLKEAYTFIM 391
G +E G E +H + ++ ++ + D+ A+ G L A+ ++
Sbjct: 461 IRLGDLELG-------EQIHS-QIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILI 509
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 145/330 (43%), Gaps = 8/330 (2%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN ++ Y D R + +F M+ I P ++TYP +LK C + L G Q+ +
Sbjct: 416 VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQ 475
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ K+ + Y + L+ Y + A + + VVSW +I + + +A
Sbjct: 476 IIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKA 535
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M D G DE + +SAC L L G+ +H Q G + AL+ +
Sbjct: 536 LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 595
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y++CG + + L F + E + W+A++ G Q G EEAL +F M I N TF
Sbjct: 596 YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 655
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ A + ++ G + H + G + + + A+ G + +A + +
Sbjct: 656 GSAVKAASETANMKQG-KQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVS 714
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEV 424
+ N + A+++A S H G G+E
Sbjct: 715 TK-NEVSWNAIINAYSKH------GFGSEA 737
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 37/327 (11%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISG-LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCR 178
++ RGI+P T ++L+ C + +G L+EG ++ + + K GLDS+ + L FY
Sbjct: 35 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 94
Query: 179 RKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
A KVFD+M ER++ +WN +I +GE G FV+M P+E T VL
Sbjct: 95 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 154
Query: 239 ACTELGNLSLG--KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINV 296
AC G+++ + +H +++ +G + + LID+Y++ G V AR +F + +
Sbjct: 155 ACRG-GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 213
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR---- 352
+W AMI GL+++ EA+ LF +M I P F VL AC +E G +
Sbjct: 214 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 273
Query: 353 -------------------YFH-----EMEHVHGIKPMR--IHYHTMADILARAGHLKEA 386
YFH EH+ R + Y+T+ + L++ G+ ++A
Sbjct: 274 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 333
Query: 387 YTFIMNM---PFQPNPIVLRALLSASS 410
M +P+ L +L+ A S
Sbjct: 334 MELFKRMHLDGLEPDSNTLASLVVACS 360
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 142/306 (46%), Gaps = 4/306 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
++H+QI GL ++ + ++L F K Y + + + + WN +I+ A
Sbjct: 66 KLHSQILKLGLDSNGCLSEKLFDFYLF---KGDLYGAFKVFDEMPERTIFTWNKMIKELA 122
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS-GLNEGMQVQANVTKSGLDSDV 164
+ E +F+ M + P E T+ VL+AC S + Q+ A + GL
Sbjct: 123 SRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDST 182
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL 224
N L+ Y A +VFD + + SW +I+ +N EA+ F M L
Sbjct: 183 VVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVL 242
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCA 284
G P VLSAC ++ +L +G+ +H +++ G + + AL+ +Y G + A
Sbjct: 243 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 302
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA 344
+FS M + + T++ +I GL+Q GY E+A+ELF M + P+ T ++ AC+
Sbjct: 303 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD 362
Query: 345 GMVEDG 350
G + G
Sbjct: 363 GTLFRG 368
>gi|449523774|ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14850-like [Cucumis sativus]
Length = 606
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 143/415 (34%), Positives = 222/415 (53%), Gaps = 4/415 (0%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN I RP ++V FI++ R G KP T+ L AC++ GL G Q+ +
Sbjct: 177 WNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSITFCXFLNACSDKLGLGPGCQLHGFII 236
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
+SG +V +N L+ FYG C + VFD M ER+ VSW+ +I V+N +A
Sbjct: 237 RSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASC 296
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F++ + EP + + VL AC L + G+ V ++ N + +AL+DMY
Sbjct: 297 LFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYG 356
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS-ISPNYVTFL 335
KCG++ A F+ M E N+ +W+A++ G A G+A +A+ L M +++ I P+YV+ +
Sbjct: 357 KCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLI 416
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPF 395
L AC+ AG ++ G + F M+ +G++P HY + D+L RAG ++ AY FI MPF
Sbjct: 417 CALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPF 476
Query: 396 QPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKV 455
P + ALL A +H + +G +L EL+P+ S N V+++N +A G WE+V
Sbjct: 477 PPTISIWGALLGACRMHG---KPELGKLAAEKLFELDPKDSGNHVVLSNMFAATGRWEEV 533
Query: 456 SNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+ VR MK VG+KK G SW+ + IH F + S + I IL L M+
Sbjct: 534 TVVRNEMKEVGIKKGAGFSWITVDSRIHMFQAKDKSHEKDPEIQDILGKLRKEMQ 588
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 144/314 (45%), Gaps = 2/314 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W LI G + A+ F DM ++P +FT+P VLKA + G Q+ A
Sbjct: 74 VTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHAL 133
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K GL +DV+ ++ Y DA KVFD+M R++ +WN I+ V + ++
Sbjct: 134 AVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDS 193
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
V F+++ +G +PD T L+AC++ L G +H +I G N + LID
Sbjct: 194 VIAFIELLRVGGKPDSITFCXFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDF 253
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y KCG V C+ ++F RM E N +WS++I Q+ E+A LF + I P
Sbjct: 254 YGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMV 313
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
VLCAC +E G R + ++ + D+ + G + A MP
Sbjct: 314 SSVLCACAGLSEIEFG-RSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMP 372
Query: 395 FQPNPIVLRALLSA 408
+ N + ALL
Sbjct: 373 -ERNLVSWNALLGG 385
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 129/289 (44%), Gaps = 15/289 (5%)
Query: 34 FLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILCN 87
FL C K L Q+H I SG + + L+ F C + + R
Sbjct: 215 FLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDR----- 269
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+ + + W++LI Y ++ +A +F+ ++ I+PT+F VL ACA +S +
Sbjct: 270 -MGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEF 328
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G VQA K+ ++ +++ + LV YG C +A + F+ M ER++VSWN ++
Sbjct: 329 GRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAH 388
Query: 208 NLWLGEAVGYFVKMKD-LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER-GTVLNC 265
+AV +M G P +++ LSAC+ G+L G + + ER G
Sbjct: 389 QGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGP 448
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAE 313
+ L+D+ + G V CA RM + W A++ HG E
Sbjct: 449 EHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPE 497
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 82/175 (46%)
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
N+LV Y A + + RSVV+W +I V+N A+ +F M
Sbjct: 46 NHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVR 105
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
P++ T VL A T L + GK +H ++ G + + +G ++ DMY+K G + A +
Sbjct: 106 PNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKV 165
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
F M N+ TW+A I HG E+++ F + P+ +TF L AC+
Sbjct: 166 FDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSITFCXFLNACS 220
>gi|125551786|gb|EAY97495.1| hypothetical protein OsI_19422 [Oryza sativa Indica Group]
Length = 620
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 170/517 (32%), Positives = 267/517 (51%), Gaps = 18/517 (3%)
Query: 5 PVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCC----SKKHLYQI-HAQIQVSGLQND 59
PVPT P S+ + A+ FL + +HL + HA ++ L +
Sbjct: 108 PVPT-----PRSASSSKWSAPTSAQTPTRFLSSSSPPPDAPRHLSPVAHALLEKIDLNSH 162
Query: 60 AQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFID 119
+ L+ T+ S + A + N + + WN +++ Y E + D
Sbjct: 163 DHTVHSLI---TIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAYGRVGMNGEVGRMLRD 219
Query: 120 MKRRG-IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCR 178
M + G + P T VL AC + L G V+ +G+++D + LV Y C
Sbjct: 220 MVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETDSLVGSALVGMYEKCG 279
Query: 179 RKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
+A +VFD + ++ VV+WN +IT +N EA+ F MK G PD+ T+ VLS
Sbjct: 280 EIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKKAGVCPDKITLAGVLS 339
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
AC+ +G L LG + RG N +GTAL+DMYAKCG + A +F +M NV +
Sbjct: 340 ACSAVGALELGSELDGYASCRGLYNNVYVGTALVDMYAKCGDLDKAIEVFRKMRCKNVAS 399
Query: 299 WSAMILGLAQHGYAEEALELFSNMKN-SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM 357
W+A+I GLA +G +EA++ F M+N + P+ +TF+GVL AC HAG+V+DG R+F+ +
Sbjct: 400 WNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSACVHAGLVKDGKRWFNSL 459
Query: 358 EHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQ 417
I P HY M D+LAR+GHL+E + FI +P + + ++L ALL+A K
Sbjct: 460 TSEFQIIPKIEHYSCMVDLLARSGHLEEVWDFIEKIPDKVDAVMLGALLAA--CRKCKNV 517
Query: 418 DGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVE 477
+ +G V R+++LEP S N V+ + YA G + + +R M+ G+ K G SWVE
Sbjct: 518 E-IGERVINRIIQLEPTNSWNYVVSSKIYASSGRLDDSAKMRGPMRERGVNKTPGCSWVE 576
Query: 478 LGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ G + FY+G + Q +YQ+L+ L M++ +
Sbjct: 577 ISGKVLEFYAGDEPQHGADDMYQVLDLLVDEMRLEGY 613
>gi|357128066|ref|XP_003565697.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Brachypodium distachyon]
Length = 564
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 238/415 (57%), Gaps = 11/415 (2%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
W +++ GY+ + + + +F M + GI+ + FT L ACA I+ L G Q+
Sbjct: 144 WTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCSIALHACASIANLCVGQQLHVLCL 203
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA-- 214
+ ++++ N+L+ Y SC DA ++FD++ ER++V+WN +I W +
Sbjct: 204 RKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPERNLVTWNTMIA------WYSQCNH 257
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ ++++ +P+ T+ + SAC L +L G+ VH + R + Q+ AL+DM
Sbjct: 258 LMALQLLREMNLQPNCFTLTSITSACAGLASLRFGQQVHGAALRRNYGKDLQMCNALVDM 317
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG++ A+ +F+ M+ + +W++MI G +GYA E+++LF++M ++ + P++V F
Sbjct: 318 YSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGYANESIQLFTSMIHAGVHPDHVVF 377
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
LG++CACNH G+V++G+ +F M + ++P + Y + ++LARAG L+EA+ I MP
Sbjct: 378 LGLICACNHGGLVDEGWNFFRSMTSEYNLQPNKEIYGCVTNLLARAGRLREAFDLIHRMP 437
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
F P+ V ALL A +H +G R+++E+ P ++ V++AN YA W +
Sbjct: 438 FAPDETVWGALLGACKMHK---NVELGRLAARKIIEINPDRAKTYVLLANIYAAGNKWGE 494
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
++ RR ++ +G +K G SW+++ I+ F + S +++ ++L+ L HM
Sbjct: 495 YADTRRLLRGIGSRKEAGTSWIDVTDKIYSFTTADSSSPQVSLADEVLQILARHM 549
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 148/341 (43%), Gaps = 30/341 (8%)
Query: 71 TLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEF 130
+L + L +AR++ + + D + W ++ GYA + A+ +F M G+ P EF
Sbjct: 12 SLCAGGALRHARAVF-DEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAGVGPNEF 70
Query: 131 TYPFVLKAC--AEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRK---RDACK 185
T VL AC G E + A + G+D Y N L+ Y SC ++ K
Sbjct: 71 TLSSVLTACRGGAADGGCEPSSLHAVAVRRGVDHMPYVVNALIEAYASCEEGVGVEESRK 130
Query: 186 VFDDMCE-RSVVSWNVIITVCVENLWLGEAVG--YFVKMKDLGFEPDETTMLVVLSACTE 242
+FD + R+ SW + V + W E G F M G E T + L AC
Sbjct: 131 LFDALGSGRTAASWTSM--VAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCSIALHACAS 188
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
+ NL +G+ +H+ + + N + +LIDMY C + AR LF + E N+ TW+ M
Sbjct: 189 IANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPERNLVTWNTM 248
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
I +Q + AL+L M ++ PN T + AC + G + VHG
Sbjct: 249 IAWYSQCNHL-MALQLLREM---NLQPNCFTLTSITSACAGLASLRFG-------QQVHG 297
Query: 363 IKPMRIHY-------HTMADILARAGHLKEAYTFIMNMPFQ 396
+R +Y + + D+ ++ G + A M ++
Sbjct: 298 -AALRRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYK 337
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 71/163 (43%), Gaps = 35/163 (21%)
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
T LI GA+ AR +F M + +V W+AM+ G A +G AL+LF M + +
Sbjct: 6 ATTLIKSLCAGGALRHARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAGV 65
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
PN T VL AC G DG G +P +H + R G
Sbjct: 66 GPNEFTLSSVLTACR--GGAADG-----------GCEPSSLHA-----VAVRRG------ 101
Query: 388 TFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLE 430
+ +MP+ V+ AL+ A A ++GVG E R+L +
Sbjct: 102 --VDHMPY-----VVNALIEAY----ASCEEGVGVEESRKLFD 133
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 93/238 (39%), Gaps = 16/238 (6%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+H D Q+ LV S ++ A+ + N ++ + W ++I GY
Sbjct: 294 QVHGAALRRNYGKDLQMCNALVDM--YSKCGSIANAKKMF-NMMDYKDKLSWTSMITGYG 350
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS---GLDS 162
+ E++ +F M G+ P + ++ AC ++EG ++T +
Sbjct: 351 MNGYANESIQLFTSMIHAGVHPDHVVFLGLICACNHGGLVDEGWNFFRSMTSEYNLQPNK 410
Query: 163 DVY-TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV--ENLWLGEAVGYFV 219
++Y NL+ G R D + +V W ++ C +N+ LG
Sbjct: 411 EIYGCVTNLLARAGRLREAFDLIHRMPFAPDETV--WGALLGACKMHKNVELGR----LA 464
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
K + PD V+L+ GN G++ + + RG + GT+ ID+ K
Sbjct: 465 ARKIIEINPDRAKTYVLLANIYAAGN-KWGEYADTRRLLRGIGSRKEAGTSWIDVTDK 521
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/411 (35%), Positives = 217/411 (52%), Gaps = 6/411 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W ++++ Y R EA+ VF DM G+ P EF VL AC I GL G Q+ +
Sbjct: 280 VSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSI-GL--GRQLHCS 336
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K L +D+ +N L+ YG + + + + +VSW I+ +N + +A
Sbjct: 337 AIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKA 396
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ +M GF P+ VLS+C ++ +L G H ++ G G ALI+M
Sbjct: 397 IALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINM 456
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG +G ARL F M +V +W+++I G AQHG A +ALE+FS M+++ I P+ TF
Sbjct: 457 YSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTF 516
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
LGVL CNH+GMVE+G +F M + P HY M D+L R G EA I +MP
Sbjct: 517 LGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMP 576
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
F+P+ ++ + LL++ +H +G RL+EL R S + V+++N YA G WE
Sbjct: 577 FEPDALIWKTLLASCKLH---RNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWED 633
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
VRR M G+KK G SW+E+ +H F S S IYQ+L L
Sbjct: 634 ARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGEL 684
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 173/385 (44%), Gaps = 20/385 (5%)
Query: 54 SGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREA 113
+G ++ E R L S L A + +V + W +++ GY + RP A
Sbjct: 40 NGCAESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNV-VAWTSVMSGYTRNGRPEAA 98
Query: 114 VWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRF 173
+ +F DM G+ P +F L ACA++ L G QV + ++G D + + L+
Sbjct: 99 LAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEM 158
Query: 174 YGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTM 233
Y C A +VFD M VV + +I+ N A ++M G +P+E TM
Sbjct: 159 YSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTM 218
Query: 234 LVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL--GTALIDMYAKCGAVGCARLLFSRM 291
+L+AC + LG+ +H LI++ + + + TALID Y++ G A+ +F +
Sbjct: 219 TTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSL 274
Query: 292 EEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGY 351
NV +W +M+ + G EEAL++F +M + + PN VL AC G+
Sbjct: 275 HCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL----G 330
Query: 352 RYFHEMEHVHG-IKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASS 410
R H H I +R+ + + + R G ++E + N I L+S ++
Sbjct: 331 RQLHCSAIKHDLITDIRVS-NALLSMYGRTGLVEELEAML-------NKIENPDLVSWTT 382
Query: 411 IHDAKYQDGVGNEVRRRLLELEPRG 435
A +Q+G G + L ++ G
Sbjct: 383 AISANFQNGFGEKAIALLCQMHSEG 407
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 115/277 (41%), Gaps = 5/277 (1%)
Query: 35 LKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP 94
L C S Q+H L D ++ L+ ++ L + N + +
Sbjct: 321 LGACGSIGLGRQLHCSAIKHDLITDIRVSNALL---SMYGRTGLVEELEAMLNKIENPDL 377
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W I + +A+ + M G P + + VL +CA+++ L++GMQ
Sbjct: 378 VSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCL 437
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K G DS++ T N L+ Y C + A FD M V SWN +I ++ +A
Sbjct: 438 ALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKA 497
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA-LID 273
+ F KM+ G +PD++T L VL C G + G+ +I++ + A +ID
Sbjct: 498 LEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMID 557
Query: 274 MYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQH 309
M + G A + + M E + W ++ H
Sbjct: 558 MLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLH 594
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/411 (33%), Positives = 221/411 (53%), Gaps = 10/411 (2%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I G A + E + + +M +KP FT VL AE ++ G ++
Sbjct: 205 VSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGC 264
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ GLD+D+Y ++L+ Y C R D+C+VF + ER +SWN II CV+N E
Sbjct: 265 SIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEG 324
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ +F +M +P + ++ AC L L LGK +H + G N + ++L+DM
Sbjct: 325 LRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDM 384
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG + A+ +F RM ++ +W+AMI+G A HG A +A+ELF M+ I
Sbjct: 385 YAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIK------ 438
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
VL AC+H G+V++ ++YF+ M GI P HY ++D+L RAG L+EAY FI M
Sbjct: 439 -AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMH 497
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
P + LLSA +H K D + +V R+LE++P + +++AN Y+ W++
Sbjct: 498 IGPTGSIWATLLSACRVH--KNID-MAEKVANRILEVDPNNTGAYILLANIYSAARRWKE 554
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+ R M+ +G++K SW+E+ ++ F +G +S I + +E L
Sbjct: 555 AAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVL 605
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 172/379 (45%), Gaps = 37/379 (9%)
Query: 40 SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNN 99
S+ Q+HAQ+ L+ A L L ++ S NL + L N ++ + W +
Sbjct: 21 SRSQAQQLHAQV----LKFQASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKS 76
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
+IR Y P +++ FI M G+ P +P VLK+CA + LN G + + + G
Sbjct: 77 VIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVG 136
Query: 160 LDSDVYTNNNLVRFYG-------SCRRKRDACKVFDDMCERS------------------ 194
LD D+YT N L+ Y S R++ A +VFD+M ER+
Sbjct: 137 LDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIF 196
Query: 195 -------VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLS 247
+VSWN II N E + +M +PD T+ VL E ++S
Sbjct: 197 EMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDIS 256
Query: 248 LGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA 307
GK +H I +G + + ++LIDMYAKC V + +F+ + E + +W+++I G
Sbjct: 257 RGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCV 316
Query: 308 QHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
Q+G +E L F M + I P +F ++ AC H + G + H +G
Sbjct: 317 QNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLG-KQLHGYITRNGFDENI 375
Query: 368 IHYHTMADILARAGHLKEA 386
++ D+ A+ G+++ A
Sbjct: 376 FIASSLVDMYAKCGNIRTA 394
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 153/465 (32%), Positives = 244/465 (52%), Gaps = 7/465 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIHA I SGLQ + L+ F S L S + W+++I +A
Sbjct: 75 QIHAHIIKSGLQVIPLVCHYLINF---YSKTQLPLLSSQVFEESERKSSTTWSSVISSFA 131
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
++ P A+ F M + P + +P KACA + + G V V K+G D DV+
Sbjct: 132 QNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVF 191
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
++LV Y C ++A VFD+M R+VVSW+ +I + EA+ F + G
Sbjct: 192 VGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEG 251
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+ ++ T+ V+ C L LGK +H + L+ +G++LI +Y+KCG + A
Sbjct: 252 LDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAY 311
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F + N+ W+AM++ AQH + +EA +LF+ M+N+ + PN++TFL VL AC+HAG
Sbjct: 312 RVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAG 371
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+VE+G +YF M+ + I+P HY +M D+L RAG L+EA + I MP +P V A
Sbjct: 372 LVEEGKKYFALMKK-YEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWGAF 430
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
++ IH + ++ EL S V+++N YA G +E + R+ +++
Sbjct: 431 ITGCRIHG---NTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAKARKMLRDR 487
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
G+KK G+SW+E G +H+F +G V + IYQ LE L M+
Sbjct: 488 GVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEME 532
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 156/356 (43%), Gaps = 45/356 (12%)
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L +G Q+ A++ KSGL + L+ FY + + +VF++ +S +W+ +I+
Sbjct: 70 LLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVISS 129
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
+N A+ YF +M PD+ AC LG +GK VH +I+ G ++
Sbjct: 130 FAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVD 189
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+G++L+DMYAKCG + AR +F M NV +WS MI G Q G EEA+ LF
Sbjct: 190 VFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALL 249
Query: 325 SSISPNYVTFLGVLCACNHA-----------------------------------GMVED 349
+ N T V+ C A G++E
Sbjct: 250 EGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEG 309
Query: 350 GYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA---YTFIMNMPFQPNPIVLRALL 406
YR F E+ IK + + ++ M A+ H KEA +T + N +PN I +L
Sbjct: 310 AYRVFDEVP----IKNLGM-WNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVL 364
Query: 407 SASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFM 462
A S H ++G + E+EP G+Q+ + + G ++ +V + M
Sbjct: 365 YACS-HAGLVEEGKKYFALMKKYEIEP-GTQHYASMVDLLGRAGKLQEALSVIKGM 418
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 148/449 (32%), Positives = 232/449 (51%), Gaps = 34/449 (7%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN++I GY EA ++ M + P E T V+ A A++ L G ++ +
Sbjct: 222 VSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQS 281
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT----------- 203
+ + GL+ V N L+ Y C+ A +F++M +++VVSW ++
Sbjct: 282 IEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESA 341
Query: 204 -----------VCVENLWLG---------EAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
V + N +G EA+ F +M+ PD+ T++ LSAC++L
Sbjct: 342 VRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQL 401
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
G L +G W+H + + +N LGTAL+DMYAKCG + A +F M N TW+A+I
Sbjct: 402 GALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAII 461
Query: 304 LGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
GLA HG A+ FS M + + P+ +TF+GVL AC H G+V+ G YF++M +GI
Sbjct: 462 CGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGI 521
Query: 364 KPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNE 423
P HY + D+L RAG L+EA I +MPF+P+ +V AL S IH + +G
Sbjct: 522 SPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVH---MGER 578
Query: 424 VRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIH 483
+LLEL+P V++AN Y + MWE+ VR+ M+ G++K G S +E+ G ++
Sbjct: 579 AASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVY 638
Query: 484 RFYSGYDSQVELAGIYQILETLNLHMKVL 512
F S + IY+ L L ++V+
Sbjct: 639 DFIIRDKSHPQSEKIYECLTRLTRQIEVI 667
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 144/431 (33%), Positives = 219/431 (50%), Gaps = 38/431 (8%)
Query: 16 KPSNCN-SDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSS 74
KP+N N S +L ++ LS L+ C S + +IHAQ+ +GL +D L LV FC +S
Sbjct: 41 KPTNWNASHVLIQSNPLLSLLEACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISE 100
Query: 75 SKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIK-PTEFTYP 133
+NL Y IL N N +V WN IRGY S+ P AV ++ +M R+G P +TYP
Sbjct: 101 WRNLDYCDKILNNAANLNV-FSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYP 159
Query: 134 FVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER 193
+ K CA S ++ +V + G DSD++ +N ++ SC A K+FD+ C R
Sbjct: 160 LLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVR 219
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
+VSWN II V EA + KM +L PDE TM+ V+SA +L NL+LG+ +H
Sbjct: 220 DLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLH 279
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
+ E G L L AL+DMY KC + A++LF M + V +W+ M++G A+ G E
Sbjct: 280 QSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLE 339
Query: 314 -------------------------------EALELFSNMKNSSISPNYVTFLGVLCACN 342
EAL LF M+ SS++P+ +T + L AC+
Sbjct: 340 SAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACS 399
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHT-MADILARAGHLKEAYTFIMNMPFQPNPIV 401
G ++ G + H H + M + T + D+ A+ G++K+A MP + N +
Sbjct: 400 QLGALDVGI-WMHHYVDKHNLT-MNVALGTALVDMYAKCGNIKKAIQVFEEMPGR-NSLT 456
Query: 402 LRALLSASSIH 412
A++ ++H
Sbjct: 457 WTAIICGLALH 467
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 2/228 (0%)
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
L N + + + WN LI G+ + R +EA+ +F +M+ + P + T L AC+++
Sbjct: 344 LFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGA 403
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L+ G+ + V K L +V LV Y C + A +VF++M R+ ++W II
Sbjct: 404 LDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICG 463
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER-GTVL 263
+ A+ YF +M +G PDE T + VLSAC G + G+ Q+ + G
Sbjct: 464 LALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISP 523
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHG 310
+ + L+D+ + G + A L M E + W A+ G HG
Sbjct: 524 KLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHG 571
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 155/459 (33%), Positives = 229/459 (49%), Gaps = 9/459 (1%)
Query: 33 SFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S LK C L QIH+QI + Q +A + L+ + L A IL +
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDM--YAKLGKLDTAWDILIRFA 552
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
V + W +I GY + +A+ F M RGI+ E + ACA + L EG
Sbjct: 553 GKDV-VSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQ 611
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ A SG SD+ N LV Y C + ++ F+ ++WN +++ ++
Sbjct: 612 QIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSG 671
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
EA+ FV+M G + + T + A +E N+ GK VH + + G ++
Sbjct: 672 NNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCN 731
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
ALI MYAKCG++ A F + N +W+A+I ++HG+ EAL+ F M +S++ P
Sbjct: 732 ALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRP 791
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
N+VT +GVL AC+H G+V+ G YF M +G+ P HY + D+L RAG L A F
Sbjct: 792 NHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEF 851
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
I MP +P+ +V R LLSA +H +G LLELEP S V+++N YA
Sbjct: 852 IQEMPIKPDALVWRTLLSACVVHKNM---EIGEFAAHHLLELEPEDSATYVLLSNLYAVS 908
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
W+ R+ MK G+KK G SW+E+ SIH FY G
Sbjct: 909 KKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVG 947
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 162/357 (45%), Gaps = 26/357 (7%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPI----PWNNLI 101
QIHA+I GL++ + L+ + + +L AR + D + + W +I
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDL--ARRVF-----DGLRLKDHSSWVAMI 260
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
G + ++ EA+ +F DM GI PT + + VL AC +I L G Q+ V K G
Sbjct: 261 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 320
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
SD Y N LV Y A +F +M +R V++N +I + + +A+ F +M
Sbjct: 321 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
G EPD T+ ++ AC+ G L G+ +H + G N ++ AL+++YAKC +
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADI 440
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
A F E NV W+ M++ + +F M+ I PN T+ +L C
Sbjct: 441 ETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 500
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYH-------TMADILARAGHLKEAYTFIM 391
G +E G E +H + ++ ++ + D+ A+ G L A+ ++
Sbjct: 501 IRLGDLELG-------EQIHS-QIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILI 549
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 145/330 (43%), Gaps = 8/330 (2%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN ++ Y D R + +F M+ I P ++TYP +LK C + L G Q+ +
Sbjct: 456 VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQ 515
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ K+ + Y + L+ Y + A + + VVSW +I + + +A
Sbjct: 516 IIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKA 575
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M D G DE + +SAC L L G+ +H Q G + AL+ +
Sbjct: 576 LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 635
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y++CG + + L F + E + W+A++ G Q G EEAL +F M I N TF
Sbjct: 636 YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 695
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ A + ++ G + H + G + + + A+ G + +A + +
Sbjct: 696 GSAVKAASETANMKQG-KQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVS 754
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEV 424
+ N + A+++A S H G G+E
Sbjct: 755 TK-NEVSWNAIINAYSKH------GFGSEA 777
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 37/327 (11%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISG-LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCR 178
++ RGI+P T ++L+ C + +G L+EG ++ + + K GLDS+ + L FY
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134
Query: 179 RKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
A KVFD+M ER++ +WN +I +GE G FV+M P+E T VL
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 239 ACTELGNLSLG--KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINV 296
AC G+++ + +H +++ +G + + LID+Y++ G V AR +F + +
Sbjct: 195 ACRG-GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR---- 352
+W AMI GL+++ EA+ LF +M I P F VL AC +E G +
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 353 -------------------YFH-----EMEHVHGIKPMR--IHYHTMADILARAGHLKEA 386
YFH EH+ R + Y+T+ + L++ G+ ++A
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 387 YTFIMNM---PFQPNPIVLRALLSASS 410
M +P+ L +L+ A S
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACS 400
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 142/306 (46%), Gaps = 4/306 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
++H+QI GL ++ + ++L F K Y + + + + WN +I+ A
Sbjct: 106 KLHSQILKLGLDSNGCLSEKLFDFYLF---KGDLYGAFKVFDEMPERTIFTWNKMIKELA 162
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS-GLNEGMQVQANVTKSGLDSDV 164
+ E +F+ M + P E T+ VL+AC S + Q+ A + GL
Sbjct: 163 SRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDST 222
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL 224
N L+ Y A +VFD + + SW +I+ +N EA+ F M L
Sbjct: 223 VVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVL 282
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCA 284
G P VLSAC ++ +L +G+ +H +++ G + + AL+ +Y G + A
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 342
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA 344
+FS M + + T++ +I GL+Q GY E+A+ELF M + P+ T ++ AC+
Sbjct: 343 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD 402
Query: 345 GMVEDG 350
G + G
Sbjct: 403 GTLFRG 408
>gi|347954492|gb|AEP33746.1| chloroplast biogenesis 19, partial [Barbarea verna]
Length = 494
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 151/479 (31%), Positives = 243/479 (50%), Gaps = 38/479 (7%)
Query: 67 VRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIK 126
V F T S + R + N + W + I + + R EA F M+ G++
Sbjct: 5 VPFVTRQKSSQIQ--RILKLNQSTSETTVSWTSRITLLSRNGRLAEAAKEFSSMRLAGVE 62
Query: 127 PTEFTYPFVLKACAEISGLNE----------------------GMQVQANVTKSGL---- 160
P T+ +L C ++S +E G + +K G
Sbjct: 63 PNHITFIALLSGCGDVSSGSEALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRGRFGKA 122
Query: 161 --------DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
D + T N ++ Y + +A K+FD+M ER ++SW +I V+ +
Sbjct: 123 RLVFDFMEDKNSVTWNTMIDGYMRSGQVNNAVKLFDEMPERDLISWTAMINGFVKKGFHE 182
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
EA+ +F +M+ G +PD ++ L+ACT LG LS G WVH ++ + N ++ +LI
Sbjct: 183 EALAWFREMQISGVKPDYVAIIAALAACTHLGALSFGLWVHRYVMNQDFKNNIRVSNSLI 242
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
D+Y +CG V AR +F +ME+ V +W+++I+G A +G A E+L F M+ P+ V
Sbjct: 243 DLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAV 302
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
TF G L AC+H G+VE+G RYF M+ H I P HY + D+ +RAG L++A + +
Sbjct: 303 TFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEDALNVVQS 362
Query: 393 MPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMW 452
MP +PN +V+ +LL+A H + + + L +L + N VI++N YA G+W
Sbjct: 363 MPMKPNEVVIGSLLAACRNHGNNTV--LAERLVKHLSDLNVKSHSNYVILSNMYAADGIW 420
Query: 453 EKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
E S +RR MK +GLKK G S VE+ H F +G + VE A I ++LE ++ +++
Sbjct: 421 EGASKMRRKMKGLGLKKQPGFSSVEIDDCTHVFMAGDSAHVETAYIREVLELISSDLRL 479
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 222/416 (53%), Gaps = 3/416 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ +N +I GYA S +A+ + +M +KP FT VL +E + +G ++
Sbjct: 208 VSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGY 267
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V + G+DSDVY ++LV Y R D+ +VF + R +SWN ++ V+N EA
Sbjct: 268 VIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEA 327
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M +P V+ AC L L LGK +H ++ G N + +AL+DM
Sbjct: 328 LRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDM 387
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG + AR +F RM ++ +W+A+I+G A HG+ EA+ LF MK + PN V F
Sbjct: 388 YSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAF 447
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ VL AC+H G+V++ + YF+ M V+G+ HY +AD+L RAG L+EAY FI M
Sbjct: 448 VAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMC 507
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
+P V LLS+ S+H + +V ++ ++ V++ N YA G W++
Sbjct: 508 VEPTGSVWSTLLSSCSVHK---NLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKE 564
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
++ +R M+ GL+K SW+E+ H F SG S + I + L+ + M+
Sbjct: 565 MAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQME 620
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 145/328 (44%), Gaps = 37/328 (11%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W ++IR + +A+ F++M+ G P +P VLK+C + L G V
Sbjct: 71 LAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGF 130
Query: 155 VTKSGLDSDVYTNNNLVRFY--------------------------GSCRRKRDAC---- 184
+ + G+D D+YT N L+ Y G K + C
Sbjct: 131 IVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPF 190
Query: 185 ------KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
+VF+ M + VVS+N II ++ +A+ +M +PD T+ VL
Sbjct: 191 GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP 250
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
+E ++ GK +H +I +G + +G++L+DMYAK + + +FSR+ + +
Sbjct: 251 IFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS 310
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
W++++ G Q+G EAL LF M + + P V F V+ AC H + G + H
Sbjct: 311 WNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLG-KQLHGYV 369
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEA 386
G + D+ ++ G++K A
Sbjct: 370 LRGGFGSNIFIASALVDMYSKCGNIKAA 397
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 36/188 (19%)
Query: 187 FDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNL 246
F + V++W +I + +A+ FV+M+ G PD VL +CT + +L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 247 SLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG------------------------ 282
G+ VH ++ G + G AL++MYAK +G
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 283 ------------CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
R +F M +V +++ +I G AQ G E+AL + M + + P+
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 331 YVTFLGVL 338
T VL
Sbjct: 242 SFTLSSVL 249
>gi|356564808|ref|XP_003550640.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37320-like [Glycine max]
Length = 501
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 157/431 (36%), Positives = 226/431 (52%), Gaps = 10/431 (2%)
Query: 84 ILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS 143
+L NYV ++P+ N+ G +V + M++ G F + +C
Sbjct: 68 MLENYV--TIPLGHNSATNGTTAEITIESSV---LHMEQ-GFGVDVFFLSQAVSSCGSKR 121
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
L G+Q +G + VY ++L+ Y C DAC+VF++M R+VVSW II
Sbjct: 122 DLWGGIQYHCLAITTGFVASVYVGSSLISLYSRCAFLGDACRVFEEMPVRNVVSWTAIIA 181
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
+ + + F +M+ P+ T +LSAC G L G+ H Q+I G
Sbjct: 182 GFAQEWHVDMCLELFQQMRGSDLRPNYFTYTSLLSACMGSGALGHGRCAHCQIIRMGFHS 241
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
+ ALI MY+KCGA+ A +F M +V TW+ MI G AQHG A+EA+ LF M
Sbjct: 242 YLHIENALISMYSKCGAIDDALHIFENMVSRDVVTWNTMISGYAQHGLAQEAINLFEEMI 301
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
++P+ VT+LGVL +C H G+V++G YF+ M HG++P HY + D+L RAG L
Sbjct: 302 KQGVNPDAVTYLGVLSSCRHGGLVKEGQVYFNSMVE-HGVQPGLDHYSCIVDLLGRAGLL 360
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
EA FI NMP PN +V +LLS+S +H + +G E L +EP S L +A
Sbjct: 361 LEARDFIQNMPIFPNAVVWGSLLSSSRLHGSV---PIGIEAAENRLLMEPGCSATLQQLA 417
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N YA VG W KV+ VR+ MK+ GLK G SWVE+ +HRF + S +A + I+
Sbjct: 418 NLYARVGWWNKVARVRKSMKDKGLKPNPGCSWVEVKSKVHRFEAQDKSNSRMADMLLIMN 477
Query: 504 TLNLHMKVLNF 514
+L HM LN
Sbjct: 478 SLMDHMSSLNL 488
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 120/267 (44%), Gaps = 29/267 (10%)
Query: 179 RKRDACKVFDDMCERSV---VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLV 235
R++ ++ DDM E V + N + + +V + + GF D +
Sbjct: 57 RRQSHLRLIDDMLENYVTIPLGHNSATNGTTAEITIESSVLHM----EQGFGVDVFFLSQ 112
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
+S+C +L G H I G V + +G++LI +Y++C +G A +F M N
Sbjct: 113 AVSSCGSKRDLWGGIQYHCLAITTGFVASVYVGSSLISLYSRCAFLGDACRVFEEMPVRN 172
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
V +W+A+I G AQ + + LELF M+ S + PNY T+ +L AC +G + G R H
Sbjct: 173 VVSWTAIIAGFAQEWHVDMCLELFQQMRGSDLRPNYFTYTSLLSACMGSGALGHG-RCAH 231
Query: 356 EMEHVHGIKPMRIHYHT-------MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
+ +R+ +H+ + + ++ G + +A NM V R +++
Sbjct: 232 -------CQIIRMGFHSYLHIENALISMYSKCGAIDDALHIFENM-------VSRDVVTW 277
Query: 409 SSIHDAKYQDGVGNEVRRRLLELEPRG 435
+++ Q G+ E E+ +G
Sbjct: 278 NTMISGYAQHGLAQEAINLFEEMIKQG 304
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 150/489 (30%), Positives = 244/489 (49%), Gaps = 37/489 (7%)
Query: 34 FLKLCCSKKHLY----QIHAQIQVSGLQNDAQI-------------LKELVRFCTLSSSK 76
FL C+K + QIH Q+ G D + L++ + SS +
Sbjct: 69 FLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHR 128
Query: 77 NLTYARSILCNYVN-----------DSVPI----PWNNLIRGYAWSDRPREAVWVFIDMK 121
++ +++ Y + D +P+ WN +I GYA + +EA+ +F +M
Sbjct: 129 DVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMM 188
Query: 122 RRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKR 181
+ ++P E TY VL ACA + G QV + V G DS++ N L+ Y C
Sbjct: 189 KMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVE 248
Query: 182 DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
AC +F + + V+SWN +I EA+ F +M G P++ TML VL AC
Sbjct: 249 TACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACA 308
Query: 242 ELGNLSLGKWVHLQLIER--GTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
LG + +G+W+H+ + +R G L T+LIDMYAKCG + A +F+ M ++ +W
Sbjct: 309 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSW 368
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+AMI G A HG A+ + +LFS M+ I P+ +TF+G+L AC+H+GM++ G F M
Sbjct: 369 NAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQ 428
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
+ + P HY M D+L +G KEA I M +P+ ++ +LL A +H
Sbjct: 429 DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHG---NVE 485
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
+ + L+++EP + ++++N YA G WE V+ +R + +KK+ G S +E+
Sbjct: 486 LAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVD 545
Query: 480 GSIHRFYSG 488
+ F G
Sbjct: 546 SVVFEFVVG 554
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 174/362 (48%), Gaps = 36/362 (9%)
Query: 66 LVRFCTLSSS-KNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRG 124
L+ C S L YA S+ + + + WN +IRG+A S P ++ +++ M G
Sbjct: 1 LIELCVPSPHFDGLPYATSVF-ETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLG 59
Query: 125 IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDAC 184
+ P +T+PF+LK+CA+ EG Q+ V K G D D+Y + +L+ Y R DA
Sbjct: 60 LLPNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAY 119
Query: 185 KVFDDMCER-------------------------------SVVSWNVIITVCVENLWLGE 213
KVFD R VVSWN +I+ E E
Sbjct: 120 KVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKE 179
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
A+ F +M + PDE+T + VLSAC G++ LG+ VH + + G N ++ ALID
Sbjct: 180 ALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALID 239
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
+Y+KCG V A LF + +V +W+ +I G +EAL LF M S +PN VT
Sbjct: 240 LYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 299
Query: 334 FLGVLCACNHAGMVEDGYRYFHEM--EHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
L VL AC H G ++ G R+ H + + G+ ++ D+ A+ G ++ A+
Sbjct: 300 MLSVLPACAHLGAIDIG-RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFN 358
Query: 392 NM 393
+M
Sbjct: 359 SM 360
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 32/245 (13%)
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
A VF+ + E + + WN +I + ++ +V M LG P+ T +L +C +
Sbjct: 17 ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDM---------------------------- 274
+ G+ +H Q+++ G L+ + T+LI M
Sbjct: 77 SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136
Query: 275 ---YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
YA G + A+ LF + +V +W+AMI G A+ G +EALELF M ++ P+
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDE 196
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
T++ VL AC H+G +E G R H HG + + D+ ++ G ++ A
Sbjct: 197 STYVTVLSACAHSGSIELG-RQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQ 255
Query: 392 NMPFQ 396
+ ++
Sbjct: 256 GLSYK 260
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 148/422 (35%), Positives = 228/422 (54%), Gaps = 3/422 (0%)
Query: 95 IPWNNLIRGYAWSDRP-REAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ WN+ I A S+ +A+ F++M + G KP T+ +L A + +S L G Q+ A
Sbjct: 523 VSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHA 582
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER-SVVSWNVIITVCVENLWLG 212
+ K + D N L+ FYG C + D +F M ER VSWN +I+ + N L
Sbjct: 583 LILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILH 642
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
+A+G M G D+ T+ VLSAC + L G VH I +G+AL+
Sbjct: 643 KAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALV 702
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
DMYAKCG + A F M N+++W++MI G A+HG+ +AL+LF+ MK P++V
Sbjct: 703 DMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHV 762
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
TF+GVL AC+H G+V++G+ +F M V+ + P H+ M D+L RAG +K+ FI
Sbjct: 763 TFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKT 822
Query: 393 MPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMW 452
MP PN ++ R +L A +++ + +G + L+ELEP + N V+++N +A G W
Sbjct: 823 MPMNPNALIWRTILGACCRANSRNTE-LGRRAAKMLIELEPLNAVNYVLLSNMHAAGGKW 881
Query: 453 EKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVL 512
E V R M+N +KK G SWV + +H F +G + E IY L+ + M+ L
Sbjct: 882 EDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKIYDKLKEIMNKMRDL 941
Query: 513 NF 514
+
Sbjct: 942 GY 943
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 194/404 (48%), Gaps = 35/404 (8%)
Query: 39 CSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP---- 94
C+ + +Q+H QI +GL +D LV + NL A+ + D +P
Sbjct: 53 CTVEDAHQLHLQIYKTGLTSDVFWCNTLVNI--FVRAGNLVSAQKLF-----DEMPQKNL 105
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG--LNEGMQVQ 152
+ W+ L+ GYA + P EA +F + G+ P + L+AC E+ L GM++
Sbjct: 106 VSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIH 165
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRK-RDACKVFDDMCERSVVSWNVIITVCVENLWL 211
++KS SD+ +N L+ Y C DA +VF+++ ++ SWN II+V
Sbjct: 166 GLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRR--- 222
Query: 212 GEAVGYFV-------KMKDLGFEPDETTMLVVLSACTELGN--LSLGKWVHLQLIERGTV 262
G+A+ F + +L P+E T +++ L + L+L + + ++ + V
Sbjct: 223 GDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFV 282
Query: 263 LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM 322
+ +G+AL+ +A+ G + A+++F +M++ N T + +++GLA+ EEA ++F M
Sbjct: 283 KDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM 342
Query: 323 KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY-----HTMADIL 377
K+ + N ++ +L A +++G R E+ H + I+ + + + ++
Sbjct: 343 KD-LVEINASSYAVLLSAFTEFSNLKEGKRKGQEV-HAYLIRNALVDVWILIGNALVNLY 400
Query: 378 ARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVG 421
A+ + A + MP + + +++S H+ ++++ V
Sbjct: 401 AKCNAIDNARSIFQLMP-SKDTVSWNSIISGLD-HNERFEEAVA 442
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 144/309 (46%), Gaps = 18/309 (5%)
Query: 39 CSKKHLYQIHAQIQVSGLQNDAQILKELV----RFCTLSSSKNLTYARSILCNYVNDSVP 94
C L Q+ A+I+ S D + LV R+ + S+K ++ ++D
Sbjct: 264 CGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAK-------MIFEQMDDRNA 316
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG----MQ 150
+ N L+ G A + EA +F +MK ++ +Y +L A E S L EG +
Sbjct: 317 VTMNGLMVGLARQHQGEEAAKIFKEMKDL-VEINASSYAVLLSAFTEFSNLKEGKRKGQE 375
Query: 151 VQANVTKSGL-DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
V A + ++ L D + N LV Y C +A +F M + VSWN II+ N
Sbjct: 376 VHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNE 435
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
EAV F M+ G P + +++ LS+C LG + LG+ +H + I+ G L+ +
Sbjct: 436 RFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSN 495
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA-QHGYAEEALELFSNMKNSSIS 328
AL+ +YA+ + + +F M E + +W++ I LA +A++ F M +
Sbjct: 496 ALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWK 555
Query: 329 PNYVTFLGV 337
PN VTF+ +
Sbjct: 556 PNRVTFINI 564
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 146/455 (32%), Positives = 223/455 (49%), Gaps = 38/455 (8%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN+L Y P++ + VF +M G+KP T +L AC+++ L G +
Sbjct: 410 VTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGF 469
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV---------- 204
+ G+ DV+ N L+ Y C R+A VFD + R V SWN I+T
Sbjct: 470 AVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKG 529
Query: 205 -------------------------CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
CV+N + EA+ F KM+ +GF+PDETT+ +L A
Sbjct: 530 LYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRA 589
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C+ L +GK +H + + AL+DMYAKCG + +R +F M +V++W
Sbjct: 590 CSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSW 649
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+ MI HG +EAL LF M S + P+ TF VL AC+H+ +VE+G + F+ M
Sbjct: 650 NTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSR 709
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
H ++P HY + DI +RAG L+EAY FI MP +P I +A L+ ++
Sbjct: 710 DHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAK 769
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
+ ++L E++P GS N V + N +W + S +R+ MK G+ K G SW +G
Sbjct: 770 IS---AKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVG 826
Query: 480 GSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+H F +G S +E IY L+ L +K +
Sbjct: 827 NRVHTFVAGDKSNMESDKIYNFLDELFAKIKAAGY 861
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 168/356 (47%), Gaps = 18/356 (5%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL---CNYVNDSVP----IPWN 98
+IH + G+ D + V F YA+ + V D +P + WN
Sbjct: 162 EIHGFVVRHGMVEDVFVSSAFVNF----------YAKCLCVREAQTVFDLMPHRDVVTWN 211
Query: 99 NLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
+L Y P++ + VF +M G+KP T +L AC+++ L G + K
Sbjct: 212 SLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKH 271
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
G+ +V+ +N LV Y SC R+A VFD M R+V++WN + + V + + + F
Sbjct: 272 GMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVF 331
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
+M G +PD M +L AC++L +L GK +H ++ G V + + TAL+++YA C
Sbjct: 332 REMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANC 391
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
V A+ +F M NV TW+++ G+ ++ L +F M + + P+ VT L +L
Sbjct: 392 LCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSIL 451
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
AC+ ++ G + H HG+ + + + A+ ++EA +P
Sbjct: 452 HACSDLQDLKSG-KVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIP 506
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 160/349 (45%), Gaps = 4/349 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q H G+ +D I + K + AR + + V V + WN+L Y
Sbjct: 61 QFHDDATRCGVMSDVSIGNAFIH--AYGKCKCVEGARRVFDDLVARDV-VTWNSLSACYV 117
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
P++ + VF M +K T +L C+++ L G ++ V + G+ DV+
Sbjct: 118 NCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVF 177
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
++ V FY C R+A VFD M R VV+WN + + V + + + F +M G
Sbjct: 178 VSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDG 237
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+PD T+ +LSAC++L +L GK +H ++ G V N + AL+++Y C V A+
Sbjct: 238 VKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQ 297
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F M NV TW+++ G+ ++ L +F M + + P+ + +L AC+
Sbjct: 298 AVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLK 357
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
++ G + H HG+ + ++ A ++EA T MP
Sbjct: 358 DLKSG-KTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMP 405
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 135/271 (49%), Gaps = 1/271 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I WN+L Y P++ + VF +M G+KP +L AC+++ L G +
Sbjct: 309 ITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGF 368
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K G+ DV+ LV Y +C R+A VFD M R+VV+WN + + V + +
Sbjct: 369 AVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKG 428
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M G +PD TML +L AC++L +L GK +H + G V + + AL+ +
Sbjct: 429 LNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSL 488
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKC V A+++F + V +W+ ++ + E+ L +FS M + + +T+
Sbjct: 489 YAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITW 548
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKP 365
V+ C +E+ F +M+ + G KP
Sbjct: 549 SVVIGGCVKNSRIEEAMEIFRKMQTM-GFKP 578
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 150/334 (44%), Gaps = 33/334 (9%)
Query: 110 PREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNN 169
P EA+ ++ + RGIKP + + V KACA + Q + T+ G+ SDV N
Sbjct: 21 PNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNA 80
Query: 170 LVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPD 229
+ YG C+ A +VFDD+ R VV+WN + V + + + F KM + +
Sbjct: 81 FIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKAN 140
Query: 230 ETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFS 289
T+ +L C++L +L GK +H ++ G V + + +A ++ YAKC V A+ +F
Sbjct: 141 PLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFD 200
Query: 290 RMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA----- 344
M +V TW+++ G+ ++ L +F M + P+ VT +L AC+
Sbjct: 201 LMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKS 260
Query: 345 -----------GMVEDGYRY------------FHEMEHVHGIKPMR--IHYHTMADILAR 379
GMVE+ + E + V + P R I ++++A
Sbjct: 261 GKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVN 320
Query: 380 AGHLKEAYTFIMNMPF---QPNPIVLRALLSASS 410
G ++ M +P+P+ + ++L A S
Sbjct: 321 CGFPQKGLNVFREMGLNGVKPDPMAMSSILPACS 354
>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
Length = 773
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/396 (34%), Positives = 217/396 (54%), Gaps = 3/396 (0%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
W + GY+ + P+EA+ ++ +M + + F + LKAC+++ L G V A V
Sbjct: 145 WVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLRTGRAVHAQVL 204
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
K+ D D NN L+R Y +A ++FD M R++VSWN +I V+ + EA+
Sbjct: 205 KATEDPDQVVNNALLRLYSEDGCFEEALRMFDGMPHRNLVSWNSLIAGLVKKEGVFEAIE 264
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F M+ G T+ +L C + L GK +H +++ + + +L+DMYA
Sbjct: 265 AFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYA 324
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KCGA+ R +F+ M+ ++ +W+ +I G A +G EA+E F M S SP+ +TF+
Sbjct: 325 KCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIA 384
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
+L C+HAG+ +DG R F M+ HGI P HY + D+L RAG +KEA + NMPF+
Sbjct: 385 LLSGCSHAGLADDGCRLFEMMKMDHGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFK 444
Query: 397 PNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVS 456
P + +LL++ +H + V +RL ELEP + N V+++N YA GMWE V
Sbjct: 445 PTGSIWGSLLNSCRLHG---NVPLAEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVK 501
Query: 457 NVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQ 492
VR FM+ G+ K G SW+++ IH F +G ++
Sbjct: 502 VVREFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNE 537
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/407 (34%), Positives = 227/407 (55%), Gaps = 5/407 (1%)
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
++ GY + ++A+ +F + + G K + T KAC + L++G Q+ A+ K+G
Sbjct: 1 MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
DSD++ N+ ++ Y C +A VF+ + V+W +I+ CV+N +A+ +
Sbjct: 61 FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+M+ PDE T ++ A + + L G+ +H +I+ V + +GT+L+DMYAKCG
Sbjct: 121 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCG 180
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
+ A LF +M N+ W+AM++GLAQHG AEEA+ LF +MK+ I P+ V+F+G+L
Sbjct: 181 NIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILS 240
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
AC+HAG+ + Y Y H M + +GI+P HY + D L RAG ++EA I MPF+ +
Sbjct: 241 ACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASA 300
Query: 400 IVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
+ RALL A I D + G V RL LEP S V+++N YA W+ V++
Sbjct: 301 SINRALLGACRIQGDVE----XGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDA 356
Query: 459 RRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
R+ MK +KK G SW+++ +H F S + IY +E +
Sbjct: 357 RKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEM 403
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 127/273 (46%), Gaps = 16/273 (5%)
Query: 24 LLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQND----AQILKELVRFCTLSSSKNLT 79
L + A+ C + L K QIHA +G +D + IL ++ + ++
Sbjct: 33 LATAAKACGCLVLLDQGK----QIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNA---- 84
Query: 80 YARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKAC 139
I+ NY++ + W ++I G + +A+ ++ M++ + P E+T+ ++KA
Sbjct: 85 ---GIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKAS 141
Query: 140 AEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWN 199
+ ++ L +G Q+ ANV K SD + +LV Y C DA ++F M R++ WN
Sbjct: 142 SCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWN 201
Query: 200 VIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG-KWVHLQLIE 258
++ ++ EAV F MK G EPD + + +LSAC+ G S +++H +
Sbjct: 202 AMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPND 261
Query: 259 RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM 291
G + + L+D + G V A + M
Sbjct: 262 YGIEPEIEHYSCLVDALGRAGLVQEADKVIETM 294
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/419 (35%), Positives = 228/419 (54%), Gaps = 8/419 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I WN +I GY+ R + + + M G KPT T ++ A + L G +
Sbjct: 274 ITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGY 333
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT--VCVENLWLG 212
+ ++ +D D++ + +L+ FY C A +F + + VVSWNV+I+ V V N
Sbjct: 334 ILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHI-- 391
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
+A+ + MK+ +PD T LSAC++L L G+ +H +I N + AL+
Sbjct: 392 QALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMGALL 451
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
DMYAKCG V AR LF ++ + ++ +W++MI HG A EAL LF M+ ++ + V
Sbjct: 452 DMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSV 511
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN 392
TFL VL AC+HAG+V++GY YF+EM + IKP HY + D+L RAG L EAY +
Sbjct: 512 TFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQR 571
Query: 393 MPFQPNPI-VLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGM 451
+ I +L L SA +H+ +G ++ + L+E++P ++++N YA V
Sbjct: 572 SKETRSDIGLLSTLFSACLLHNNFV---LGIQIGKMLIEVDPDDPSTYILLSNMYASVNK 628
Query: 452 WEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
W++V VRR MK +GLKK G SW+E+ IH F++ S G+Y+ L L HM+
Sbjct: 629 WDEVRKVRRKMKELGLKKSPGCSWIEINQRIHPFFAEDKSNPLADGVYECLNILGCHME 687
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 176/331 (53%), Gaps = 13/331 (3%)
Query: 32 LSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
LS L+ C S K L Q IH +I G Q++ + K L+ F YA + L
Sbjct: 7 LSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHD----YASAELVFQ 62
Query: 89 VNDSVPIP---WNNLIRGYAWSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEISG 144
ND P+ WN L+ Y + R EA+ +F + ++P +TYP VLKAC +
Sbjct: 63 TND-CPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGR 121
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
+ G ++ ++ K+GL DV+ ++L+ Y C + DA K+FD+ +R V WN +I+
Sbjct: 122 VIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISC 181
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
++ A+ F KMK+LGFEP+ T VV+S+CT L NL GK VH +LIER +L+
Sbjct: 182 YFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLD 241
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+ +AL+DMY KCG + A+ +F ++ N TW+AMI G + G + +EL M +
Sbjct: 242 AFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMND 301
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
P +T ++ A + + + G ++ H
Sbjct: 302 EGTKPTLMTLTSIIYASSRSVQLRHG-KFIH 331
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 128/278 (46%), Gaps = 4/278 (1%)
Query: 136 LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD-DMCERS 194
L+ C L +G + + G S++ + +L+ FY SC A VF + C
Sbjct: 10 LRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQTNDCPLD 69
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGF-EPDETTMLVVLSACTELGNLSLGKWVH 253
V WN +++ N EA+ F ++ + PD T VVL AC LG + G+ +H
Sbjct: 70 VSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRIH 129
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
L++ G + + +G++L++MYAKC A LF + +V W+A+I + G AE
Sbjct: 130 NHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAE 189
Query: 314 EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
AL+ F MK PN VTF V+ +C +E G E+ + + +
Sbjct: 190 MALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFV-LSAL 248
Query: 374 ADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSI 411
D+ + G L+ A +P + N I A+++ S+
Sbjct: 249 VDMYGKCGCLEMAKEVFEKIP-RKNAITWNAMITGYSL 285
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 229 DETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLF 288
D T+L L CT L GK +H ++ G N L +LI Y C A L+F
Sbjct: 2 DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVF 61
Query: 289 SRME-EINVWTWSAMILGLAQHGYAEEALELFSNMK-NSSISPNYVTFLGVLCACNHAGM 346
+ ++V W+A++ + EAL+LF + NS + P++ T+ VL AC G
Sbjct: 62 QTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGR 121
Query: 347 VEDGYR 352
V G R
Sbjct: 122 VIYGRR 127
>gi|224065074|ref|XP_002301657.1| predicted protein [Populus trichocarpa]
gi|222843383|gb|EEE80930.1| predicted protein [Populus trichocarpa]
Length = 504
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 212/386 (54%), Gaps = 3/386 (0%)
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
GY+ + REA+ V+++M ++P F + LKACA++ L G V A V KS
Sbjct: 4 GYSKNGFLREALLVYVEMLWNCMEPGNFAFSTALKACADLRELWVGRGVHAQVVKSSEGP 63
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
D NN L+R Y C + KVFD M ER+V SWN +I+ V+ LGEA+ F +M+
Sbjct: 64 DQVVNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGFVKEDKLGEALDVFRRMQ 123
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
G T+ +L C + L GK +H Q+++ + + +L+DMY KCG V
Sbjct: 124 REGMGFSWVTLTTILPICARVTALLSGKEIHAQIVKSARRPDVLVLNSLVDMYVKCGVVD 183
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
R LF M ++ +W+ M+ G A +GY A++LF+ M + I P+ VTF+ +L C+
Sbjct: 184 YGRRLFDGMRSKDLTSWNTMLTGYAINGYMRVAMDLFNEMASCGIRPDDVTFIALLSGCS 243
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVL 402
HAG+ EDG + FH ME G+ P HY + D+L RAG + A + NMP + + +
Sbjct: 244 HAGLTEDGQKLFHRMEMDFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMPMKTSGSIW 303
Query: 403 RALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFM 462
+LL++ +H+ + + + RL ELEP N V+++N YA GMW+ V+ VR M
Sbjct: 304 GSLLNSCRLHN---EVPLAEAIANRLFELEPYNPGNYVMLSNIYANAGMWDSVNMVREMM 360
Query: 463 KNVGLKKMKGMSWVELGGSIHRFYSG 488
+ ++K G SW+++ IH F +G
Sbjct: 361 QTRRIRKEAGCSWIQVKNKIHSFVAG 386
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 118/265 (44%), Gaps = 15/265 (5%)
Query: 35 LKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LK C + L+ +HAQ+ S D + L+R T N V D
Sbjct: 37 LKACADLRELWVGRGVHAQVVKSSEGPDQVVNNGLLRLYTQCECFNEVLK-------VFD 89
Query: 92 SVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+P WN+LI G+ D+ EA+ VF M+R G+ + T +L CA ++ L
Sbjct: 90 QMPERNVASWNSLISGFVKEDKLGEALDVFRRMQREGMGFSWVTLTTILPICARVTALLS 149
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G ++ A + KS DV N+LV Y C ++FD M + + SWN ++T
Sbjct: 150 GKEIHAQIVKSARRPDVLVLNSLVDMYVKCGVVDYGRRLFDGMRSKDLTSWNTMLTGYAI 209
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG-KWVHLQLIERGTVLNCQ 266
N ++ A+ F +M G PD+ T + +LS C+ G G K H ++ G + +
Sbjct: 210 NGYMRVAMDLFNEMASCGIRPDDVTFIALLSGCSHAGLTEDGQKLFHRMEMDFGVSPSLE 269
Query: 267 LGTALIDMYAKCGAVGCARLLFSRM 291
L+DM + G + A ++ M
Sbjct: 270 HYACLVDMLGRAGRIDAALVVVKNM 294
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 151/461 (32%), Positives = 237/461 (51%), Gaps = 35/461 (7%)
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
++ AR I N ++ + +N ++ Y + + + + +M ++G +P + T +
Sbjct: 281 DICAARQIFDECANKNL-VMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTI 339
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVF--------- 187
ACA++ L+ G A V ++GL+ +N ++ Y C ++ ACKVF
Sbjct: 340 AACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVV 399
Query: 188 ----------------------DDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
D+M ER +VSWN +I V+ EA+ F +M++ G
Sbjct: 400 TWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQG 459
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
D TM+ + SAC LG L L KWV + + ++ QLGTAL+DM+++CG A
Sbjct: 460 IPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAM 519
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F RME+ +V W+A I +A G E A+ELF+ M + P+ V F+ +L AC+H G
Sbjct: 520 HVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGG 579
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
V+ G + F ME HGI+P +HY M D+L RAG L+EA I +MP +PN +V +L
Sbjct: 580 SVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSL 639
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
L+A H + + +L +L P V+++N YA G W V+ VR MK
Sbjct: 640 LAACRKHK---NVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEK 696
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
G++K+ G S +E+ G IH F SG +S E I +LE +N
Sbjct: 697 GVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEIN 737
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/469 (28%), Positives = 223/469 (47%), Gaps = 28/469 (5%)
Query: 6 VPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGL------QND 59
VP + P N +S LL C + K L Q+H + GL N
Sbjct: 13 VPASLKEANPITRNSSSKLLVN----------CKTLKELKQLHCDMMKKGLLCHKPASNL 62
Query: 60 AQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPI-PWNNLIRGYAWSDRPREAVWVFI 118
+++ V+ TL S L YAR+ + + + +N LIRGYA + +A+ +++
Sbjct: 63 NKLIASSVQIGTLES---LDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYV 119
Query: 119 DMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCR 178
M GI P ++T+PF+L AC++I L+EG+QV V K GL+ D++ +N+L+ FY C
Sbjct: 120 QMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECG 179
Query: 179 RKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
+ K+FD M ER+VVSW +I EAV F +M + G EP+ TM+ V+S
Sbjct: 180 KVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVIS 239
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
AC +L +L LGK V + E G L+ + AL+DMY KCG + AR +F N+
Sbjct: 240 ACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVM 299
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
++ ++ H +A + L + M P+ VT L + AC G + G + H
Sbjct: 300 YNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVG-KSSHAYV 358
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD 418
+G++ + + D+ + G + A +MP + +++ +S+ +D
Sbjct: 359 LRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPN-------KTVVTWNSLIAGLVRD 411
Query: 419 GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGL 467
G R E+ R + + +V M+E+ + R M+N G+
Sbjct: 412 GDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGI 460
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 171/354 (48%), Gaps = 15/354 (4%)
Query: 34 FLKLCCSK----KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
FL CSK Q+H + GL+ D + L+ F + + R + +
Sbjct: 135 FLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHF--YAECGKVDLGRKLFDGML 192
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+V + W +LI GY+ D +EAV +F M G++P T V+ ACA++ L G
Sbjct: 193 ERNV-VSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGK 251
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
+V + +++ G++ N LV Y C A ++FD+ +++V +N I++ V +
Sbjct: 252 KVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHE 311
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
W + + +M G PD+ TML ++AC +LG+LS+GK H ++ G +
Sbjct: 312 WASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISN 371
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
A+IDMY KCG A +F M V TW+++I GL + G E A +F M +
Sbjct: 372 AIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEM----LER 427
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+ V++ ++ A M E+ F EM++ GI R+ TM I + G+L
Sbjct: 428 DLVSWNTMIGALVQVSMFEEAIELFREMQN-QGIPGDRV---TMVGIASACGYL 477
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 148/449 (32%), Positives = 232/449 (51%), Gaps = 34/449 (7%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN++I GY EA ++ M + P E T V+ A A++ L G ++ +
Sbjct: 222 VSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQS 281
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT----------- 203
+ + GL+ V N L+ Y C+ A +F++M +++VVSW ++
Sbjct: 282 IEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESA 341
Query: 204 -----------VCVENLWLG---------EAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
V + N +G EA+ F +M+ PD+ T++ LSAC++L
Sbjct: 342 VRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQL 401
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
G L +G W+H + + +N LGTAL+DMYAKCG + A +F M N TW+A+I
Sbjct: 402 GALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAII 461
Query: 304 LGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
GLA HG A+ FS M + + P+ +TF+GVL AC H G+V+ G YF++M +GI
Sbjct: 462 CGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGI 521
Query: 364 KPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNE 423
P HY + D+L RAG L+EA I +MPF+P+ +V AL S IH + +G
Sbjct: 522 SPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVH---MGER 578
Query: 424 VRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIH 483
+LLEL+P V++AN Y + MWE+ VR+ M+ G++K G S +E+ G ++
Sbjct: 579 AASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVY 638
Query: 484 RFYSGYDSQVELAGIYQILETLNLHMKVL 512
F S + IY+ L L ++V+
Sbjct: 639 DFIIRDKSHPQSEKIYECLTRLTRQIEVI 667
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 143/431 (33%), Positives = 218/431 (50%), Gaps = 38/431 (8%)
Query: 16 KPSNCN-SDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSS 74
KP+N N S +L ++ LS L+ C S + +IHAQ+ +GL +D L LV FC +S
Sbjct: 41 KPTNWNASHVLIQSNPLLSLLEACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISE 100
Query: 75 SKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIK-PTEFTYP 133
+NL Y IL N N + WN IRGY S+ P AV ++ +M R+G P +TYP
Sbjct: 101 WRNLDYCDKILNNAANLNX-FSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYP 159
Query: 134 FVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER 193
+ K CA S ++ +V + G DSD++ +N ++ SC A K+FD+ C R
Sbjct: 160 LLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVR 219
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
+VSWN II V EA + KM +L PDE TM+ V+SA +L NL+LG+ +H
Sbjct: 220 DLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLH 279
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
+ E G L L AL+DMY KC + A++LF M + V +W+ M++G A+ G E
Sbjct: 280 QSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLE 339
Query: 314 -------------------------------EALELFSNMKNSSISPNYVTFLGVLCACN 342
EAL LF M+ SS++P+ +T + L AC+
Sbjct: 340 SAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACS 399
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHT-MADILARAGHLKEAYTFIMNMPFQPNPIV 401
G ++ G + H H + M + T + D+ A+ G++K+A MP + N +
Sbjct: 400 QLGALDVGI-WMHHYVDKHNLT-MNVALGTALVDMYAKCGNIKKAIQVFEEMPGR-NSLT 456
Query: 402 LRALLSASSIH 412
A++ ++H
Sbjct: 457 WTAIICGLALH 467
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 2/228 (0%)
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
L N + + + WN LI G+ + R +EA+ +F +M+ + P + T L AC+++
Sbjct: 344 LFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGA 403
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L+ G+ + V K L +V LV Y C + A +VF++M R+ ++W II
Sbjct: 404 LDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICG 463
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER-GTVL 263
+ A+ YF +M +G PDE T + VLSAC G + G+ Q+ + G
Sbjct: 464 LALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISP 523
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHG 310
+ + L+D+ + G + A L M E + W A+ G HG
Sbjct: 524 KLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHG 571
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 160/490 (32%), Positives = 250/490 (51%), Gaps = 20/490 (4%)
Query: 34 FLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
LK C HL +HAQ+ G D + L+ + + L AR++
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIAL--YAKCRRLGSARTVF----- 177
Query: 91 DSVPIP------WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
+ +P+P W ++ YA + P EA+ +F M++ +KP VL A +
Sbjct: 178 EGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQD 237
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L +G + A+V K GL+ + +L Y C + A +FD M +++ WN +I+
Sbjct: 238 LKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISG 297
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
+N + EA+ F +M + PD ++ +SAC ++G+L + ++ + +
Sbjct: 298 YAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDD 357
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+ +ALIDM+AKCG+V ARL+F R + +V WSAMI+G HG A EA+ L+ M+
Sbjct: 358 VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER 417
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ PN VTFLG+L ACNH+GMV +G+ +F+ M H I P + HY + D+L RAGHL
Sbjct: 418 GGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMAD-HKINPQQQHYACVIDLLGRAGHLD 476
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
+AY I MP QP V ALLSA H +G ++L ++P + + V ++N
Sbjct: 477 QAYEVIKCMPVQPGVTVWGALLSACKKH---RHVELGEYAAQQLFSIDPSNTGHYVQLSN 533
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILET 504
YA +W++V+ VR MK GL K G SWVE+ G + F G S I + +E
Sbjct: 534 LYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEW 593
Query: 505 LNLHMKVLNF 514
+ +K F
Sbjct: 594 IESRLKEGGF 603
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 202/382 (52%), Gaps = 7/382 (1%)
Query: 33 SFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDS 92
S + K L QIHA++ V GLQ ++ +L+ SS ++T+AR + +
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIH--ASSSFGDITFARQVFDDLPRPQ 83
Query: 93 VPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQ 152
+ PWN +IRGY+ ++ ++A+ ++ +M+ + P FT+P +LKAC+ +S L G V
Sbjct: 84 I-FPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVH 142
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC--ERSVVSWNVIITVCVENLW 210
A V + G D+DV+ N L+ Y CRR A VF+ + ER++VSW I++ +N
Sbjct: 143 AQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
EA+ F M+ + +PD ++ VL+A T L +L G+ +H +++ G + L +
Sbjct: 203 PMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS 262
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
L MYAKCG V A++LF +M+ N+ W+AMI G A++GYA EA+++F M N + P+
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
++ + AC G +E R +E + + D+ A+ G + E +
Sbjct: 323 TISITSAISACAQVGSLEQA-RSMYEYVGRSDYRDDVFISSALIDMFAKCGSV-EGARLV 380
Query: 391 MNMPFQPNPIVLRALLSASSIH 412
+ + +V A++ +H
Sbjct: 381 FDRTLDRDVVVWSAMIVGYGLH 402
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/416 (34%), Positives = 223/416 (53%), Gaps = 9/416 (2%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACA--EISGLNEGMQVQ 152
+PW+ +I + + EAV +FI M+ + P EFT +L CA + SGL E Q+
Sbjct: 314 VPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGE--QLH 371
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
V K G D D+Y +N L+ Y C + A K+F ++ ++ VSWN +I V ENL G
Sbjct: 372 GLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVI-VGYENLGEG 430
Query: 213 -EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
+A F + E T L AC L ++ LG VH I+ + +L
Sbjct: 431 GKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSL 490
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
IDMYAKCG + A+ +F+ ME I+V +W+A+I G + HG +AL + MK+ PN
Sbjct: 491 IDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNG 550
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
+TFLGVL C++AG+++ G F M HGI+P HY M +L R+G L +A I
Sbjct: 551 LTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIE 610
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGM 451
+P++P+ ++ RA+LSAS + + +L++ P+ V+V+N YA
Sbjct: 611 GIPYEPSVMIWRAMLSASMNQN---NEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQ 667
Query: 452 WEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNL 507
W V+++R+ MK +G+KK G+SW+E G +H F G ++ I +LE LN+
Sbjct: 668 WANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNM 723
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 184/408 (45%), Gaps = 20/408 (4%)
Query: 33 SFLKLCCS--KKHLYQ-IHAQIQVSGLQNDAQILKELVRFCTLSSSKN--LTYARSILCN 87
SFLKL S K + +H+ I G ++A + L+ ++ S + T ILC
Sbjct: 151 SFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCK 210
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+ + W ++ Y + +++ + M+ G P +T+ LKA + +
Sbjct: 211 DI-----VVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDF 265
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
V + K+ D L++ Y DA KVF++M + VV W+ +I +
Sbjct: 266 AKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQ 325
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLS-LGKWVHLQLIERGTVLNCQ 266
N + EAV F++M++ P+E T+ +L+ C +G S LG+ +H +++ G L+
Sbjct: 326 NGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA-IGKCSGLGEQLHGLVVKVGFDLDIY 384
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+ ALID+YAKC + A LF+ + N +W+ +I+G G +A +F +
Sbjct: 385 VSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQ 444
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+S VTF L AC ++ G + + K + + +++ D+ A+ G +K A
Sbjct: 445 VSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVS-NSLIDMYAKCGDIKFA 503
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPR 434
+ M + AL+S S H G+G + R L ++ R
Sbjct: 504 QSVFNEME-TIDVASWNALISGYSTH------GLGRQALRILDIMKDR 544
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 4/247 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ + L +GYA D + ++ + R G + + LK + + +
Sbjct: 116 VSFVTLAQGYACQD----PIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSP 171
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ K G DS+ + L+ Y C A VF+ + + +V W I++ VEN + ++
Sbjct: 172 IVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDS 231
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ M+ GF P+ T L A LG K VH Q+++ VL+ ++G L+ +
Sbjct: 232 LKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQL 291
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y + G + A +F+ M + +V WS MI Q+G+ EA++LF M+ + + PN T
Sbjct: 292 YTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTL 351
Query: 335 LGVLCAC 341
+L C
Sbjct: 352 SSILNGC 358
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 4/204 (1%)
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
Y +L+ C + + + ++ K G D++ N L+ Y +DA +FD+M
Sbjct: 51 AYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEM 110
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
ER+ NV + + +G + ++ G E + L L +
Sbjct: 111 PERN----NVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICP 166
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
W+H +++ G N +G ALI+ Y+ CG+V AR +F + ++ W+ ++ ++G
Sbjct: 167 WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENG 226
Query: 311 YAEEALELFSNMKNSSISPNYVTF 334
Y E++L+L S M+ + PN TF
Sbjct: 227 YFEDSLKLLSCMRMAGFMPNNYTF 250
>gi|225451344|ref|XP_002274803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18970
[Vitis vinifera]
gi|298204853|emb|CBI34160.3| unnamed protein product [Vitis vinifera]
Length = 471
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 167/458 (36%), Positives = 245/458 (53%), Gaps = 27/458 (5%)
Query: 40 SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNN 99
S H+ Q+HA + + + + + K + +C SS YA + + + ++ + +N
Sbjct: 24 SIHHIKQLHAHLITNAVSSPPLLAKLIHHYCAFSSPH---YAYTFFIHLRSPNLFL-FNT 79
Query: 100 LIRGYAWSDRPREAVWVFID-MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
LI+ P ++ VF D + R + +FTY F L ACA L EG Q+ A + K
Sbjct: 80 LIKCLP----PSSSILVFADWVSREALVFDDFTYIFALGACARSPSLWEGRQIHARILKQ 135
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT-VCVEN----LWLGE 213
G+ S+V + FY + A VFD+M +RS V+WN +IT C + + +
Sbjct: 136 GVWSNVLVQTTAIHFYANNNDVALARLVFDEMRKRSSVTWNAMITGYCSQRGKVVCYARD 195
Query: 214 AVGYFVKM--KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL----NCQL 267
A+ F M G +P +TTM+ VLSA ++LG L G VH IE+ TVL + +
Sbjct: 196 ALVLFRAMLVDACGVKPTDTTMVCVLSAASQLGVLETGVGVH-GYIEK-TVLAPANDVFV 253
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
GT L+DMY+KCG +G A +F M+E NV TW+AMI GLA+HG +EALEL M +
Sbjct: 254 GTGLVDMYSKCGCLGSALCIFWGMKERNVLTWTAMITGLARHGRGKEALELLDEMVAYGV 313
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
PN VTF + AC HAG+VE+G + FH M G+ P HY + D+L RAGHLKEAY
Sbjct: 314 KPNAVTFTSLFSACCHAGLVEEGLQLFHSMRSKFGVTPGIQHYGCIVDLLGRAGHLKEAY 373
Query: 388 TFIMNMPFQPNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELE----PRGSQNLVIV 442
F+ MP +P+ I+ R+LLSA +H D + VG + + + S++ + +
Sbjct: 374 DFVRGMPVEPDAILWRSLLSACKVHRDVVMGEEVGKLLLQLQPQQSFADLVAASEDFIAL 433
Query: 443 ANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGG 480
+N YA WE V VR MK G++ G S V+ G
Sbjct: 434 SNVYASAERWEDVETVREAMKVKGIETKPGCSSVQTSG 471
>gi|297733949|emb|CBI15196.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 154/457 (33%), Positives = 238/457 (52%), Gaps = 44/457 (9%)
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
+IRG++ S+ P + V ++ M +P EFTY F++ CA L EG QV V +G
Sbjct: 1 MIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANG 60
Query: 160 LDSDVYTNNNLVRFYG---------SCRRKRD-------------------------ACK 185
++V+ +LV Y RR D A +
Sbjct: 61 YCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARR 120
Query: 186 VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGN 245
+FD+M ER+VVSW +I C + +A+ F +M+ G + D+ ++ LSAC ELG+
Sbjct: 121 IFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGD 180
Query: 246 LSLGKWVHLQLIERGTVLN----CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
L LG W+H + ER N L +LI MYA CG + A +F M++ + +W++
Sbjct: 181 LKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTS 240
Query: 302 MILGLAQHGYAEEALELFSNMKNSSIS---PNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
MI G A+ G+AEEAL +F M+ P+ +TF+GVLCAC+HAG V+ G +F M
Sbjct: 241 MITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMN 300
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD 418
GI P HY M D+L+RAG L EA+ I +MP +PN V ALL IH K +
Sbjct: 301 KKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGGCRIH--KNAE 358
Query: 419 GVGNEVRRRLLELEP-RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVE 477
+ ++ LEL+P + + LV+++N YA W+ V+ VR+ M +G++K G SWV+
Sbjct: 359 LASHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWVQ 418
Query: 478 LGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ G +H F +G + + +Y++L + K+ +
Sbjct: 419 INGVVHDFVAGDWTHKHASSVYEMLSKITRQAKLEGY 455
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 142/327 (43%), Gaps = 44/327 (13%)
Query: 33 SFLKLCCSKKHLY----QIHAQIQVSGLQNDAQILKELVRFCTLSSS------------- 75
SFL C++ L Q+H ++ +G + + LV ++
Sbjct: 34 SFLIGGCARSRLLREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDE 93
Query: 76 ---KNLTYARSILCNYVN-----------DSVP----IPWNNLIRGYAWSDRPREAVWVF 117
+N+ S+L YV D +P + W +I G A R ++A+ +F
Sbjct: 94 IVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLF 153
Query: 118 IDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD----VYTNNNLVRF 173
+M+R G+K + L ACAE+ L G + + + + + V NN+L+
Sbjct: 154 HEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHM 213
Query: 174 YGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE---PDE 230
Y SC A KVF M +RS +SW +IT + EA+G F M+ LG + PD
Sbjct: 214 YASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDG 273
Query: 231 TTMLVVLSACTELGNLSLGKWVHLQLIER-GTVLNCQLGTALIDMYAKCGAVGCA-RLLF 288
T + VL AC+ G + G+ + ++ G V + ++D+ ++ G + A RL+
Sbjct: 274 ITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIE 333
Query: 289 SRMEEINVWTWSAMILGLAQHGYAEEA 315
S + N W A++ G H AE A
Sbjct: 334 SMPMKPNDAVWGALLGGCRIHKNAELA 360
>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 148/408 (36%), Positives = 215/408 (52%), Gaps = 4/408 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKP-TEFTYPFVLKACAEISGLNEGMQVQA 153
+ WN +I G+ + +A++ F + + E ++ V ACA L G QV
Sbjct: 197 VSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHG 256
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
K G+ + VY NN+L YG C D K+F + R VV+WN++I V N +
Sbjct: 257 VALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYED 316
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
A F M+ G PDE + VL +C L L G +H Q+I G V N ++ ++LI
Sbjct: 317 ACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLIT 376
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MYAKCG++ A +F E+ NV W+A+I QHG+A +ELF M I P+Y+T
Sbjct: 377 MYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYIT 436
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
F+ VL AC+H G VE+G+ YF+ M VHGI P HY + D+L+RAG L A FI M
Sbjct: 437 FVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELM 496
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
P +P+ V ALLSA H +G EV +L +LEP N V++ N GM
Sbjct: 497 PIKPDASVWGALLSACRNHSNLI---MGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLN 553
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQI 501
+ VRR M+++G++K G SW+++ S + F S + IY++
Sbjct: 554 EADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEM 601
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 177/383 (46%), Gaps = 14/383 (3%)
Query: 37 LCCSK--KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP 94
L CS+ KH QIH+Q+ + L + + L+ S + T + + +DS
Sbjct: 37 LNCSRTSKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLL--LFSSAPDDSKN 94
Query: 95 I-PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ W +LI RP +A+ F M+R G+ P +T+ VL AC + + G Q+ +
Sbjct: 95 VVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHS 154
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
V K G ++V+ + LV Y C A KVF++M R++VSWN +I ++N +
Sbjct: 155 LVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQ 214
Query: 214 AVGYFVKMKDLGFEP----DETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
A+ +F K L E DE + V SAC GNL GK VH ++ G +
Sbjct: 215 AIFFF---KTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINN 271
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
+L DMY KCG LFS +V TW+ MI+ + E+A F M+ P
Sbjct: 272 SLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIP 331
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
+ ++ VL +C + + G +++ +K +R+ ++ + A+ G L +A+
Sbjct: 332 DEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRV-ASSLITMYAKCGSLVDAFQ- 389
Query: 390 IMNMPFQPNPIVLRALLSASSIH 412
I N + A+++A H
Sbjct: 390 IFEETEDRNVVCWTAIIAACQQH 412
>gi|449433319|ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Cucumis sativus]
Length = 606
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/415 (34%), Positives = 222/415 (53%), Gaps = 4/415 (0%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN I RP ++V FI++ R G KP T+ L AC++ GL G Q+ +
Sbjct: 177 WNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSITFCAFLNACSDKLGLGPGCQLHGFII 236
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
+SG +V +N L+ FYG C + VFD M ER+ VSW+ +I V+N +A
Sbjct: 237 RSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASC 296
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F++ + EP + + VL AC L + G+ V ++ N + +AL+DMY
Sbjct: 297 LFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYG 356
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS-ISPNYVTFL 335
KCG++ A F+ M E N+ +W+A++ G A G+A +A+ L M +++ I P+YV+ +
Sbjct: 357 KCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLI 416
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPF 395
L AC+ AG ++ G + F M+ +G++P HY + D+L RAG ++ AY FI MPF
Sbjct: 417 CALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPF 476
Query: 396 QPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKV 455
P + ALL A +H + +G +L EL+P+ S N V+++N +A G WE+V
Sbjct: 477 PPTISIWGALLGACRMHG---KPELGKLAAEKLFELDPKDSGNHVVLSNMFAATGRWEEV 533
Query: 456 SNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+ VR MK VG+KK G SW+ + IH F + S + I IL L M+
Sbjct: 534 TVVRNEMKEVGIKKGAGFSWITVDSRIHMFQAKDKSHEKDPEIQDILGKLRKEMQ 588
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 144/314 (45%), Gaps = 2/314 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W LI G + A+ F DM ++P +FT+P VLKA + G Q+ A
Sbjct: 74 VTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHAL 133
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K GL +DV+ ++ Y DA KVFD+M R++ +WN I+ V + ++
Sbjct: 134 AVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDS 193
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
V F+++ +G +PD T L+AC++ L G +H +I G N + LID
Sbjct: 194 VIAFIELLRVGGKPDSITFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDF 253
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y KCG V C+ ++F RM E N +WS++I Q+ E+A LF + I P
Sbjct: 254 YGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMV 313
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
VLCAC +E G R + ++ + D+ + G + A MP
Sbjct: 314 SSVLCACAGLSEIEFG-RSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMP 372
Query: 395 FQPNPIVLRALLSA 408
+ N + ALL
Sbjct: 373 -ERNLVSWNALLGG 385
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 130/290 (44%), Gaps = 15/290 (5%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILC 86
+FL C K L Q+H I SG + + L+ F C + + R
Sbjct: 214 AFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDR---- 269
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
+ + + W++LI Y ++ +A +F+ ++ I+PT+F VL ACA +S +
Sbjct: 270 --MGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIE 327
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G VQA K+ ++ +++ + LV YG C +A + F+ M ER++VSWN ++
Sbjct: 328 FGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYA 387
Query: 207 ENLWLGEAVGYFVKMKD-LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER-GTVLN 264
+AV +M G P +++ LSAC+ G+L G + + ER G
Sbjct: 388 HQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPG 447
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAE 313
+ L+D+ + G V CA RM + W A++ HG E
Sbjct: 448 PEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPE 497
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 82/175 (46%)
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
N+LV Y A + + RSVV+W +I V+N A+ +F M
Sbjct: 46 NHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVR 105
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
P++ T VL A T L + GK +H ++ G + + +G ++ DMY+K G + A +
Sbjct: 106 PNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKV 165
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
F M N+ TW+A I HG E+++ F + P+ +TF L AC+
Sbjct: 166 FDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSITFCAFLNACS 220
>gi|357519199|ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523910|gb|AET04364.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 515
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 170/500 (34%), Positives = 257/500 (51%), Gaps = 43/500 (8%)
Query: 42 KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
K QIHA + L + I ++ F LS + YA ++ + N ++ +N++I
Sbjct: 2 KQTKQIHAHAITNNLTRFSYISSRILAFFALSPRGDFRYAETLFTHIPNPNI-FDYNSII 60
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
Y + + + +VF M I+P T+ ++KAC +S L QV K G
Sbjct: 61 TSYTTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKACVSLSSLE---QVFTLSMKLGNS 117
Query: 162 SDVY-------------------------TNNN------LVRFYGSCRRKRDACKVFDDM 190
SDVY +N N LV Y SC +A VFD M
Sbjct: 118 SDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARDVFDKM 177
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYF--VKMKDLG---FEPDETTMLVVLSACTELGN 245
R+ S++ +++ V N + E V F +K KD G + + ++ VL+ACT +G
Sbjct: 178 PLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGA 237
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
GKW+H + E G + +LGTALID Y KCG V A +F++M +V TWSAMILG
Sbjct: 238 FEEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAMILG 297
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKP 365
LA +G + ALELF M+ PN VTF+GVL ACNH + + R F M + I P
Sbjct: 298 LAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGIMSEKYNITP 357
Query: 366 MRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVR 425
HY + D+LAR+G +K+A TFI +M +P+ + +LL+ +H Y+ +G +V
Sbjct: 358 SIEHYGCVVDVLARSGQVKKALTFINSMHIEPDGAIWGSLLNGCLMH-GHYE--LGQKVG 414
Query: 426 RRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRF 485
+ L+E EP+ S V++AN YA +G WE VS VR+ MK+ G+ + G S++E+ +IH+F
Sbjct: 415 KYLIEFEPKHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVMIVSGWSFIEIDQTIHKF 474
Query: 486 YSGYDSQVELAGIYQILETL 505
++ + IY +L L
Sbjct: 475 FADDKCCLYSREIYDVLSHL 494
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 142/335 (42%), Gaps = 27/335 (8%)
Query: 1 MVRFPVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDA 60
M+ + +H F C S LS Q + + +Y + + I +
Sbjct: 79 MLNTNIRPNSHTFTTLVKACVS--LSSLEQVFTLSMKLGNSSDVYFVSSVINAFSKHSAI 136
Query: 61 QILKELVRFCTLSSSKNLTYARSILCNY-----------VNDSVPI----PWNNLIRGYA 105
+ +++ C S++N+ S++ Y V D +P+ ++ ++ GY
Sbjct: 137 HLARQVFDEC---SNRNVVCWTSLVSGYCSCGLVNEARDVFDKMPLRNEASYSAMVSGYV 193
Query: 106 WSDRPREAVWVFIDMKRR--GIKPTEFTYPF---VLKACAEISGLNEGMQVQANVTKSGL 160
+ E V +F ++K++ G +F VL AC + EG + + V ++GL
Sbjct: 194 RNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGAFEEGKWIHSYVEENGL 253
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK 220
+ D+ L+ FY C + A KVF+ M + V +W+ +I N A+ F K
Sbjct: 254 EYDLELGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAMILGLAINGNNKMALELFEK 313
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQLGTALIDMYAKCG 279
M+ +G +P+E T + VL+AC + + E+ + + + ++D+ A+ G
Sbjct: 314 MEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGIMSEKYNITPSIEHYGCVVDVLARSG 373
Query: 280 AVGCARLLFSRME-EINVWTWSAMILGLAQHGYAE 313
V A + M E + W +++ G HG+ E
Sbjct: 374 QVKKALTFINSMHIEPDGAIWGSLLNGCLMHGHYE 408
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 115/287 (40%), Gaps = 36/287 (12%)
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRK--RDACKVFDDMCERSVVSWNVII 202
+ + Q+ A+ + L Y ++ ++ F+ R R A +F + ++ +N II
Sbjct: 1 MKQTKQIHAHAITNNLTRFSYISSRILAFFALSPRGDFRYAETLFTHIPNPNIFDYNSII 60
Query: 203 TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNL---------------- 246
T N + F KM + P+ T ++ AC L +L
Sbjct: 61 TSYTTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKACVSLSSLEQVFTLSMKLGNSSDV 120
Query: 247 ----------SLGKWVHL--QLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI 294
S +HL Q+ + + N T+L+ Y CG V AR +F +M
Sbjct: 121 YFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARDVFDKMPLR 180
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKN-----SSISPNYVTFLGVLCACNHAGMVED 349
N ++SAM+ G ++G+ E ++LF +K + + N + VL AC G E+
Sbjct: 181 NEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGAFEE 240
Query: 350 GYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
G ++ H +G++ + D + G +K A MP +
Sbjct: 241 G-KWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVK 286
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 158/495 (31%), Positives = 251/495 (50%), Gaps = 16/495 (3%)
Query: 26 SKARQCLSFLKLCCSKK----HLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYA 81
S ++Q L LCC + ++H I +G D + +L+ S ++ YA
Sbjct: 74 SPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGM--YSDLGSVDYA 131
Query: 82 RSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAE 141
R + ++ + WN L R + E + ++ M R G++ FTY +VLKAC
Sbjct: 132 RKVFDKTRKRTIYV-WNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVA 190
Query: 142 ----ISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS 197
++ L +G ++ A++T+ G S VY LV Y A VF M R+VVS
Sbjct: 191 SECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVS 250
Query: 198 WNVIITVCVENLWLGEAVGYFVKM--KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQ 255
W+ +I +N EA+ F +M + P+ TM+ VL AC L L GK +H
Sbjct: 251 WSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGY 310
Query: 256 LIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEA 315
++ RG + +AL+ MY +CG + + +F RM + +V +W+++I HGY ++A
Sbjct: 311 ILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKA 370
Query: 316 LELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMAD 375
+++F M + SP VTF+ VL AC+H G+VE+G R F M HGIKP HY M D
Sbjct: 371 IQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVD 430
Query: 376 ILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
+L RA L EA + +M +P P V +LL + IH + RRL LEP+
Sbjct: 431 LLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG---NVELAERASRRLFALEPKN 487
Query: 436 SQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVEL 495
+ N V++A+ YAE MW++V V++ +++ GL+K+ G W+E+ ++ F S + +
Sbjct: 488 AGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLM 547
Query: 496 AGIYQILETLNLHMK 510
I+ L L MK
Sbjct: 548 EQIHAFLVKLAEDMK 562
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 158/495 (31%), Positives = 253/495 (51%), Gaps = 16/495 (3%)
Query: 26 SKARQCLSFLKLCCSKKHLY----QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYA 81
S ++Q L LCC + ++H I +G D + +L+ S ++ YA
Sbjct: 74 SPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGM--YSDLGSVDYA 131
Query: 82 RSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKAC-- 139
R + ++ + WN L R + E + ++ M R G++ FTY +VLKAC
Sbjct: 132 RKVFDKTRKRTIYV-WNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVA 190
Query: 140 AEISG--LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS 197
+E + L +G ++ A++T+ G +S VY LV Y A VF+ M R+VVS
Sbjct: 191 SECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVS 250
Query: 198 WNVIITVCVENLWLGEAVGYFVKM--KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQ 255
W+ +I +N EA+ F +M + P+ TM+ VL AC L L G+ +H
Sbjct: 251 WSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGY 310
Query: 256 LIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEA 315
++ RG + +AL+ MY +CG + + +F RM + +V +W+++I HGY +A
Sbjct: 311 ILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKA 370
Query: 316 LELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMAD 375
+++F M + SP VTF+ VL AC+H G+VE+G R F M HGIKP HY M D
Sbjct: 371 IQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVD 430
Query: 376 ILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
+L RA L EA + +M +P P V +LL + IH + RRL LEP+
Sbjct: 431 LLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG---NVELAERASRRLFALEPKN 487
Query: 436 SQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVEL 495
+ N V++A+ YAE MW++V V++ +++ GL+K+ G W+E+ ++ F S + +
Sbjct: 488 AGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSMDEFNPLM 547
Query: 496 AGIYQILETLNLHMK 510
I+ L L MK
Sbjct: 548 EQIHAFLVKLAEDMK 562
>gi|356565111|ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 478
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 159/454 (35%), Positives = 233/454 (51%), Gaps = 48/454 (10%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN++IRGYA S P +AV + M +P FT+ +L ACA + EG QV A V
Sbjct: 9 WNHVIRGYARSHTPWKAVECYTHMVSSKAEPDGFTHSSLLSACARGGLVKEGEQVHATVL 68
Query: 157 KSGLDSDVYTNNNLVRFY---GSCRRKR----------------------------DACK 185
G S+V+ + +L+ FY G R R A +
Sbjct: 69 VKGYCSNVFVDTSLITFYAGRGGVERARHVFDGMPQRSVVSWNSMLAGYVRCADFDGARR 128
Query: 186 VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGN 245
VFD M R+VVSW ++ C N +A+ F +M+ E D+ ++ LSAC ELG+
Sbjct: 129 VFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMRRACVELDQVALVAALSACAELGD 188
Query: 246 LSLGKWVHLQLIERGTVLNCQ-----LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
L LG+W+H + +R N Q L ALI MYA CG + A +F +M + +W+
Sbjct: 189 LKLGRWIHWYVQQRFVARNWQQPSVRLNNALIHMYASCGILHEAYQVFVKMPRKSTVSWT 248
Query: 301 AMILGLAQHGYAEEALELFSNM-----KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
+MI+ A+ G +EAL+LF M K + P+ +TF+GVLCAC+HAG V++G++ F
Sbjct: 249 SMIMAFAKQGLGKEALDLFKTMLSDGVKVDGVRPDEITFIGVLCACSHAGFVDEGHQIFA 308
Query: 356 EMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAK 415
M+H GI P HY M D+L+RAG L EA I MP PN + ALL IH
Sbjct: 309 SMKHTWGISPSIEHYGCMVDLLSRAGLLDEARGLIETMPLNPNDAIWGALLGGCRIH--- 365
Query: 416 YQDGVGNEVRRRLLELEPRGSQN---LVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKG 472
+ ++V +L+ E G Q LV+++N YA W+ V VR+ M +G+KK G
Sbjct: 366 RNSELASQVENKLVP-ELNGDQAAGYLVLLSNIYAFGQRWQDVITVRQKMIEMGVKKPPG 424
Query: 473 MSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
SW+++ G +H F +G + + IY+ L +
Sbjct: 425 RSWIQINGVVHNFIAGDMTHKHSSFIYETLRDVT 458
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 149/371 (40%), Gaps = 59/371 (15%)
Query: 7 PTT---NHIF--------PPKPSNCNSDLLSKARQCLSF----LKLCCSKKHLY----QI 47
PTT NH+ P K C + ++S + F L C++ L Q+
Sbjct: 4 PTTTVWNHVIRGYARSHTPWKAVECYTHMVSSKAEPDGFTHSSLLSACARGGLVKEGEQV 63
Query: 48 HAQIQVSGLQNDAQILKELVRFCTLSSS-------------KNLTYARSILCNYVN---- 90
HA + V G ++ + L+ F +++ S+L YV
Sbjct: 64 HATVLVKGYCSNVFVDTSLITFYAGRGGVERARHVFDGMPQRSVVSWNSMLAGYVRCADF 123
Query: 91 -------DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKAC 139
D +P + W ++ G A + + R+A+ +F +M+R ++ + L AC
Sbjct: 124 DGARRVFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMRRACVELDQVALVAALSAC 183
Query: 140 AEISGLNEGMQV-----QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
AE+ L G + Q V ++ V NN L+ Y SC +A +VF M +S
Sbjct: 184 AELGDLKLGRWIHWYVQQRFVARNWQQPSVRLNNALIHMYASCGILHEAYQVFVKMPRKS 243
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKM-----KDLGFEPDETTMLVVLSACTELGNLSLG 249
VSW +I + EA+ F M K G PDE T + VL AC+ G + G
Sbjct: 244 TVSWTSMIMAFAKQGLGKEALDLFKTMLSDGVKVDGVRPDEITFIGVLCACSHAGFVDEG 303
Query: 250 KWVHLQLIER-GTVLNCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLA 307
+ + G + + ++D+ ++ G + AR L M N W A++ G
Sbjct: 304 HQIFASMKHTWGISPSIEHYGCMVDLLSRAGLLDEARGLIETMPLNPNDAIWGALLGGCR 363
Query: 308 QHGYAEEALEL 318
H +E A ++
Sbjct: 364 IHRNSELASQV 374
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 145/466 (31%), Positives = 245/466 (52%), Gaps = 7/466 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
++H+++ V GL++D + L+ + ++ AR + + + + WN +I GYA
Sbjct: 182 RVHSEVVVCGLESDIYVGNSLL--AMYAKFGDMGTARMVF-DRMAERDLTSWNTMISGYA 238
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS-DV 164
+ A VF M + G+ T +L ACA++ + EG + ++ + + +
Sbjct: 239 KNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNK 298
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL 224
+ N+L+ Y +C DA ++F+ + + VSWN +I N E++ F +M
Sbjct: 299 FFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALD 358
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCA 284
G PD+ T + VL AC ++ L G +H L+++G N +GTAL+DMY+KCG++ C+
Sbjct: 359 GSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACS 418
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA 344
R +F M + ++ +WSAM+ G HG EA+ + MK +S+ P+ F +L AC+HA
Sbjct: 419 RRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHA 478
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRA 404
G+V +G F++ME + +KP HY M D+L RAGHL EAY I M +P + A
Sbjct: 479 GLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAA 538
Query: 405 LLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKN 464
LL+AS +H + +++ ++ P+ + + ++N YA W+ V VR ++
Sbjct: 539 LLTASRLHK---NIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRR 595
Query: 465 VGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
GLKK G S++EL +HRF G S + IY L L +K
Sbjct: 596 KGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLK 641
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/379 (31%), Positives = 184/379 (48%), Gaps = 15/379 (3%)
Query: 40 SKKHLYQIHAQ-IQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILCNYVNDSVPI 95
S K Q+HA I S L+N+ + +L F C L S + + +L N
Sbjct: 74 SFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKN------SF 127
Query: 96 PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANV 155
WN +IRGYA + P +++ ++ +M G + FTYPFVLKAC ++ + G +V + V
Sbjct: 128 LWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEV 187
Query: 156 TKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
GL+SD+Y N+L+ Y A VFD M ER + SWN +I+ +N G A
Sbjct: 188 VVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAF 247
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ--LGTALID 273
F M G D TT+L +LSAC +L + GK +H + R ++ N +LI+
Sbjct: 248 LVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAV-RNSIGNYNKFFTNSLIE 306
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MY C + AR LF R+ + +W++MILG A++G A E+L LF M P+ VT
Sbjct: 307 MYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVT 366
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
F+ VL AC+ + G H G I + D+ ++ G L + M
Sbjct: 367 FIAVLGACDQIAALRYGMS-IHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEM 425
Query: 394 PFQPNPIVLRALLSASSIH 412
P + + A+++ +H
Sbjct: 426 P-DKSLVSWSAMVAGYGLH 443
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/475 (32%), Positives = 240/475 (50%), Gaps = 39/475 (8%)
Query: 75 SKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPF 134
+ +L AR +L + D + + WN +I GY EA + M GI+ E+TY
Sbjct: 221 NDDLVAARELL-EGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTS 279
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSD----VYTNNNLVRFYGSCRRKRDACKVFDDM 190
V+ A + N G QV A V ++ + + NN L+ Y C + +A +VFD M
Sbjct: 280 VISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKM 339
Query: 191 CERSVVSWNVIITVCV-------------------------------ENLWLGEAVGYFV 219
+ +VSWN I++ CV +N + E + F
Sbjct: 340 PVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFN 399
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+MK G EP + +++C+ LG+L G+ +H Q+I+ G + +G ALI MY++CG
Sbjct: 400 QMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCG 459
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
V A +F M ++ +W+AMI LAQHG+ +A++L+ M I P+ +TFL +L
Sbjct: 460 LVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILS 519
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
AC+HAG+V++G YF M +GI P HY + D+L RAG EA +MPF+P
Sbjct: 520 ACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGA 579
Query: 400 IVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVR 459
+ ALL+ IH +G + RLLEL P+ + ++N YA +G W++V+ VR
Sbjct: 580 PIWEALLAGCWIHGNM---ELGIQAADRLLELMPQQDGTYISLSNMYAALGQWDEVARVR 636
Query: 460 RFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ M+ G+KK G SW+E+ +H F E+ +Y+ LE L M+ L +
Sbjct: 637 KLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHAVYRYLEQLVHEMRKLGY 691
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 112/285 (39%), Gaps = 54/285 (18%)
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFD--DMCERSVVSWNVIITVCVENLWLGEAVGYFVK 220
D+ ++ Y + + A ++F+ M R VS+N +IT + A+ FV+
Sbjct: 61 DIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQ 120
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLG-KWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
MK LGF PD T VL A + + + + +H ++ + G + + AL+ Y C
Sbjct: 121 MKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCA 180
Query: 280 A---------VGCARLLFS-----RMEEINVWT--------------------------- 298
+ + AR LF R +E WT
Sbjct: 181 SSPLVNSCVLMAAARKLFDEAPPGRRDE-PAWTTIIAGYVRNDDLVAARELLEGMTDHIA 239
Query: 299 --WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
W+AMI G G+ EEA +L M + I + T+ V+ A ++AG+ G R H
Sbjct: 240 VAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIG-RQVHA 298
Query: 357 MEHVHGIKPMRIHY-----HTMADILARAGHLKEAYTFIMNMPFQ 396
++P H+ + + + R G L EA MP +
Sbjct: 299 YVLRTVVQPSG-HFVLSVNNALITLYTRCGKLVEARRVFDKMPVK 342
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 165/487 (33%), Positives = 259/487 (53%), Gaps = 14/487 (2%)
Query: 31 CL-SFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILC 86
CL S LK C + LYQ +H GL L+ S + AR +
Sbjct: 531 CLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDM--YSKCGIIEDARKVFS 588
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
+ SV + N LI GY+ + EAV +F +M +G+ P+E T+ +++AC + L
Sbjct: 589 SMPEWSV-VSMNALIAGYS-QNNLEEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLT 646
Query: 147 EGMQVQANVTKSGLDSD-VYTNNNLVRFYGSCRRKRDACKVFDDMCE-RSVVSWNVIITV 204
G Q + K G S+ Y +L+ Y + RR +AC +F ++ +S+V W +++
Sbjct: 647 LGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSG 706
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
+N + EA+ ++ +M+ G PD+ T + VL C+ L +L G+ +H + L+
Sbjct: 707 HSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLD 766
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEE-INVWTWSAMILGLAQHGYAEEALELFSNMK 323
LIDMYAKCG + + +F M NV +W+++I G A++GYAE+AL++F +M+
Sbjct: 767 ELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMR 826
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
S I P+ +TFLGVL AC+HAG V DG + F M +GI+ H M D+L R G+L
Sbjct: 827 QSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYL 886
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
+EA FI +P+ + +LL A IH D G RL+ELEP+ S V+++
Sbjct: 887 QEADDFIEAQNLKPDARLWSSLLGACRIHG---DDMRGEIAAERLIELEPQNSSAYVLLS 943
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N YA G WE+ + +R+ M++ G+KK+ G SW+++G H F +G S ++ I LE
Sbjct: 944 NIYASQGRWEEANALRKAMRDRGVKKVPGYSWIDVGQRRHIFAAGDQSHSDIGKIEMFLE 1003
Query: 504 TLNLHMK 510
L MK
Sbjct: 1004 DLYDLMK 1010
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 133/248 (53%), Gaps = 1/248 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +IRGYA + + + +F+DMK G +FT+ +L CA L G Q +
Sbjct: 394 VLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSI 453
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ K L +++ N LV Y C DA ++F+ MC+R VSWN II V++ EA
Sbjct: 454 IIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEA 513
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
F++M G D + L ACT + L GK VH ++ G G++LIDM
Sbjct: 514 FDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDM 573
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG + AR +FS M E +V + +A+I G +Q+ EEA+ LF M ++P+ +TF
Sbjct: 574 YSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTKGVNPSEITF 632
Query: 335 LGVLCACN 342
++ AC+
Sbjct: 633 ATIVEACH 640
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 156/316 (49%), Gaps = 2/316 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I G+ A+ F++M++ +K T T VL A ++ L+ G+ V A
Sbjct: 293 VAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAE 352
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K GL S++Y ++LV Y C + A KVF+ + ER+ V WN +I N +
Sbjct: 353 AIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKV 412
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F+ MK G+ D+ T +LS C +L +G H +I++ N +G AL+DM
Sbjct: 413 MELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDM 472
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCGA+ AR +F M + + +W+ +I G Q EA +LF M + I +
Sbjct: 473 YAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACL 532
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
L AC + + G + H + G+ + ++ D+ ++ G +++A +MP
Sbjct: 533 ASTLKACTNVHGLYQG-KQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMP 591
Query: 395 FQPNPIVLRALLSASS 410
+ + + + AL++ S
Sbjct: 592 -EWSVVSMNALIAGYS 606
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 155/353 (43%), Gaps = 39/353 (11%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIH + GL+ ++ LV + L A+ + V D + W L GY
Sbjct: 181 QIHCSMIKMGLERNSYCGGALVDM--YAKCDRLGDAQRVFDGIV-DPNTVCWTCLFSGYV 237
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ P EAV VF M+ G +P + V+
Sbjct: 238 KAGLPEEAVIVFERMRGEGHRPDHLAFVTVINT--------------------------- 270
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
Y S + +DA +F +M VV+WNV+I+ + A+ YF+ M+
Sbjct: 271 --------YISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSS 322
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+ +T+ VLSA + NL LG VH + I+ G N +G++L+ MY+KC + A
Sbjct: 323 VKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAA 382
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F +EE N W+AMI G A +G + + +ELF +MK+S + + TF +L C +
Sbjct: 383 KVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSH 442
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
+E G + FH + + + + D+ A+ G L++A +M + N
Sbjct: 443 DLEMGSQ-FHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDN 494
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 124/294 (42%), Gaps = 39/294 (13%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H++ + G+ ++ ++ +V + ++YA + D WN+++ Y+
Sbjct: 82 VHSKSLILGIDSEGRLGNAIVDL--YAKCAQVSYAEKQFNSLEKDVTA--WNSMLSMYSS 137
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+P + + F+ + I P +FT+ VL A + + G Q+ ++ K GL+ + Y
Sbjct: 138 IGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYC 197
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
LV Y C R DA +VFD + + + V W + + V+ EAV F +M+ G
Sbjct: 198 GGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGH 257
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
PD HL + +I+ Y G + ARL
Sbjct: 258 RPD-----------------------HLAFV------------TVINTYISLGKLKDARL 282
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
LF M +V W+ MI G + G A+E F NM+ SS+ T VL A
Sbjct: 283 LFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSA 336
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 1/214 (0%)
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
L G V + G+DS+ N +V Y C + A K F+ + E+ V +WN +++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLS 133
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
+ G+ + FV + + P++ T +VLS N+ G+ +H +I+ G
Sbjct: 134 MYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLER 193
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
N G AL+DMYAKC +G A+ +F + + N W+ + G + G EEA+ +F M+
Sbjct: 194 NSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMR 253
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM 357
P+++ F+ V+ G ++D F EM
Sbjct: 254 GEGHRPDHLAFVTVINTYISLGKLKDARLLFGEM 287
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 228/417 (54%), Gaps = 10/417 (2%)
Query: 95 IPWNNLIRGYAWSDR-----PREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+ +N +I G+ ++ EA+ +F M+R+GIKP++FT+ ++K C I G
Sbjct: 280 VMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGK 339
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ A++ K + SD + + L+ Y D K F+ + +VSW +I +N
Sbjct: 340 QIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNG 399
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
A+ F ++ G +PDE + +LSAC ++ G+ VH ++ G +
Sbjct: 400 QFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQN 459
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
+ I MYAK G + A++ F ++ +V +WS MI AQHG+A++A+ LF MK+ I P
Sbjct: 460 SQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHP 519
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
N +TFLGVL AC+H G+VE+G RY+ M+ + +K H + D+L+RAG L +A F
Sbjct: 520 NQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNF 579
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGV-GNEVRRRLLELEPRGSQNLVIVANKYAE 448
I+N F +P++ R LLS I Y+D V G V +L+EL+P+ S + V++ N Y +
Sbjct: 580 ILNSGFGDHPVMWRTLLSGCRI----YKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTD 635
Query: 449 VGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
G+ + +R MK+ G++K G SW+E+G +H F G S IY+ LE +
Sbjct: 636 AGIDLPATKIRELMKDRGIRKEPGQSWIEVGNEVHSFVVGDISHPMSQIIYKKLEGM 692
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 124/263 (47%), Gaps = 7/263 (2%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I +N LI GY +A+ +F + + +K +F+Y VL AC +I G +
Sbjct: 76 ISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGL 135
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
GL V+ N L+ Y C R A +F+ E VSWN +IT E
Sbjct: 136 AIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEM 195
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSAC-TELGNL-SLGKWVHLQLIERGTVLNCQLGTALI 272
+ VKM G + T+ L +C L N+ S GK +H +++G L+ +GTAL+
Sbjct: 196 LKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALL 255
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ-----HGYAEEALELFSNMKNSSI 327
DMYAK G +G A LF NV ++AMI G Q A EAL+LFS M+ I
Sbjct: 256 DMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGI 315
Query: 328 SPNYVTFLGVLCACNHAGMVEDG 350
P+ TF ++ CNH E G
Sbjct: 316 KPSDFTFSSIIKICNHIEAFEYG 338
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 117/229 (51%), Gaps = 4/229 (1%)
Query: 182 DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
+A K+FD M ERSV+S+N++I+ + +A+G F + + + D+ + VLSAC
Sbjct: 62 NAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACG 121
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
++ + +LGK +H I G L LIDMY KC + ARLLF +E++ +W++
Sbjct: 122 QIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNS 181
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC--NHAGMVEDGYRYFHEMEH 359
+I G A+ G EE L+L M ++ + N T L +C N MV G + H
Sbjct: 182 LITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYG-KTLHGYTV 240
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
G+ + + D+ A+ G+L +A P Q N ++ A+++
Sbjct: 241 KQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQ-NVVMYNAMIAG 288
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 110/239 (46%), Gaps = 12/239 (5%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPWNNLI 101
QIHA I +Q+D I L+ +L S + C +S P + W +I
Sbjct: 340 QIHAHICKHNIQSDEFIGSTLIELYSLLGSTE----DQLKCF---NSTPKLDIVSWTTMI 392
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
GYA + + A+ +F ++ G KP EF +L ACA+++ G QV K+G+
Sbjct: 393 AGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIG 452
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
+ N+ + Y A F+++ VVSW+V+I ++ +A+ F M
Sbjct: 453 TLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELM 512
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLG-KWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
K G P++ T L VL+AC+ G + G ++ + +N + T ++D+ ++ G
Sbjct: 513 KSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAG 571
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 152/464 (32%), Positives = 249/464 (53%), Gaps = 14/464 (3%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H + SG + D+ I+ L+ ++ K+L A+ + + +D + WN +I GY
Sbjct: 22 VHTHVVKSGFECDSYIVNSLIHL--YANGKDLGAAKQLF-SLCSDRDVVSWNAMIDGYVK 78
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
VF M R + ++ ++ A + ++E ++ + + L +
Sbjct: 79 RGEMGHTRMVFDRMVCRDV----ISWNTIINGYAIVGKIDEAKRLFDEMPERNL----VS 130
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
N+++ + C +A +F +M R VVSWN ++ + EA+ F +M+ +G
Sbjct: 131 WNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGV 190
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
+P E T++ +LSAC LG L G +H + + +N +GTAL+DMYAKCG + A
Sbjct: 191 KPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQ 250
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
+F+ ME +V W+ +I G+A HG+ +EA +LF MK +S+ PN +TF+ +L AC+HAGM
Sbjct: 251 VFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGM 310
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALL 406
V++G + M +GI+P HY + D+LARAG L+EA I MP +PNP L ALL
Sbjct: 311 VDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEPNPSALGALL 370
Query: 407 SASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVG 466
IH ++ +G V +RL+ L+P S ++++N YA W+ VR MK G
Sbjct: 371 GGCRIH-GNFE--LGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNG 427
Query: 467 LKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+ K+ G+S +EL G +HRF +G S E IY L ++ +K
Sbjct: 428 ISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYDKLNEIHTRLK 471
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 141/314 (44%), Gaps = 41/314 (13%)
Query: 130 FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD 189
TYPFV+KAC E S G+ V +V KSG + D Y N+L+ Y + + A ++F
Sbjct: 1 MTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSL 60
Query: 190 MCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
+R VVSWN +I V+ +G F +M D + +++ +G +
Sbjct: 61 CSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRM----VCRDVISWNTIINGYAIVGKIDEA 116
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
K + ++ ER N +++ + KCG V A LFS M +V +W++M+ AQ
Sbjct: 117 KRLFDEMPER----NLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQC 172
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG---YRYFH----EMEHVHG 362
G EAL LF M+ + P T + +L AC H G ++ G + Y + E+ + G
Sbjct: 173 GKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVG 232
Query: 363 IKPMRIH-----------------------YHTMADILARAGHLKEAYTFIMNM---PFQ 396
+ ++ ++T+ +A GH+KEA M +
Sbjct: 233 TALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVE 292
Query: 397 PNPIVLRALLSASS 410
PN I A+LSA S
Sbjct: 293 PNDITFVAMLSACS 306
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 162/523 (30%), Positives = 264/523 (50%), Gaps = 45/523 (8%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFC------TLSSSKNLT-YARSI 84
L+ L+ C S L IH + + L +D + L+ T NL YA I
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALALCVDDSTFHKPTNLLGYAYGI 75
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
N ++ + +N LIR ++ P +A + M + I P T+PF++KA E+
Sbjct: 76 FSQIQNPNLFV-FNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASTEMEC 134
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCR-------------------------- 178
+ G Q + + + G +DVY N+LV Y +C
Sbjct: 135 VVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAG 194
Query: 179 -----RKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTM 233
DA ++FD+M R++ +W+++I +N +A+ F MK G +ET M
Sbjct: 195 YCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVM 254
Query: 234 LVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEE 293
+ V+S+C LG L G+ H +++ +N LGTAL+DMY +CG + A +F + +
Sbjct: 255 VSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPD 314
Query: 294 INVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRY 353
+ +WS++I GLA HG+A +A+ FS M SP +T VL AC+H G+V+ G
Sbjct: 315 KDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKGLEI 374
Query: 354 FHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH- 412
+ M+ +GI+P HY + D+L RAG L EA FI+ MP +PN +L ALL A I+
Sbjct: 375 YENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALLGACKIYK 434
Query: 413 DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKG 472
+ + + VGN L+E++P S V+++N YA G WEK+ ++R MK +KK G
Sbjct: 435 NTEVAERVGN----MLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLVKKPPG 490
Query: 473 MSWVELGGSIHRFYSGYDSQ-VELAGIYQILETLNLHMKVLNF 514
S +E+ G I++F G D + E+ I ++ E + ++++ +
Sbjct: 491 WSLIEIDGKINKFSMGDDQKHPEMGKIKRLWEEILGKIRLIGY 533
>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera]
gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 157/488 (32%), Positives = 249/488 (51%), Gaps = 22/488 (4%)
Query: 31 CLSFLKLCCSKKHLYQIHAQIQVS---------GLQNDAQILKELVRFCTLSSSKNLTYA 81
C FL C S+K L L N+ + +L+ S + + A
Sbjct: 71 CALFLHSCISRKALEHGQRLYLQLLLYRDRCNHNLLNNPTLKGKLITL--FSVCRRVDEA 128
Query: 82 RSILCNYVNDSVPIP---WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKA 138
R + + D V +P W + GY+ + P+EA+ ++ +M + + F + LKA
Sbjct: 129 RRVFEDGGED-VDLPESVWVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGNFAFSMALKA 187
Query: 139 CAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSW 198
C+++ L G V A V K+ D D NN L+R Y +A +VFD M R+VVSW
Sbjct: 188 CSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDEALRVFDGMPHRNVVSW 247
Query: 199 NVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
N +I V+ + EA+ F M+ G T+ +L C + L GK +H +++
Sbjct: 248 NSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVK 307
Query: 259 RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALEL 318
+ + +L+DMYAKCGA+ R +F+ M+ ++ +W+ +I G A +G EA+E
Sbjct: 308 STAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMES 367
Query: 319 FSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILA 378
F M S SP+ +TF+ +L C+HAG+ +DG R F M+ +GI P HY + D+L
Sbjct: 368 FQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVLG 427
Query: 379 RAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQN 438
RAG +KEA + NMPF+P + +LL++ +H + V +RL ELEP + N
Sbjct: 428 RAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHG---NVPLAEAVAKRLFELEPNNAGN 484
Query: 439 LVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG----YDSQVE 494
V+++N YA GMWE V VR FM+ G+ K G SW+++ IH F +G + + VE
Sbjct: 485 YVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNEFRNSVE 544
Query: 495 LAGIYQIL 502
+++ L
Sbjct: 545 YKKVWKRL 552
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 163/509 (32%), Positives = 253/509 (49%), Gaps = 41/509 (8%)
Query: 15 PKP---SNCNSDLLSK--ARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRF 69
PKP SN N L +Q +S L+ + IHAQ+ +G D ++ EL+R
Sbjct: 31 PKPHPNSNSNPKSLKSLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRS 90
Query: 70 CTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTE 129
C S + YA I Y ++ + LI G+ S +A+ ++ M I P
Sbjct: 91 C--SKCHAIDYASRIF-QYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDN 147
Query: 130 FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD 189
+ +LKAC L EG +V + K GL S+ ++ YG C DA +VF++
Sbjct: 148 YLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEE 207
Query: 190 MCE------------------------------RSVVSWNVIITVCVENLWLGEAVGYFV 219
M E + V W +I V N + A+ F
Sbjct: 208 MPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFR 267
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
M+ P+E T++ VLSAC++LG L +G+WVH + + LN +G ALI+MY++CG
Sbjct: 268 GMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCG 327
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
++ A+ +F M++ +V T++ MI GL+ +G + +A+ELF M + P VTF+GVL
Sbjct: 328 SIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLN 387
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
AC+H G+V+ G++ FH M +G++P HY M D+L R G L+EAY I M P+
Sbjct: 388 ACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDH 447
Query: 400 IVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVR 459
I+L LLSA +H +G +V + L + S V++++ YA G W++ + VR
Sbjct: 448 IMLGTLLSACKMHK---NLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVR 504
Query: 460 RFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
MK G++K G S +E+ IH F G
Sbjct: 505 AKMKEAGMQKEPGCSSIEVNNEIHEFLLG 533
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/404 (33%), Positives = 222/404 (54%), Gaps = 9/404 (2%)
Query: 91 DSVPI----PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +PI WN +I GYA + +EA+ +F +M + ++P E T V+ ACA+ + +
Sbjct: 178 DEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIE 237
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G QV + + G S++ N L+ Y C AC +F+ + + V+SWN +I
Sbjct: 238 LGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYT 297
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER--GTVLN 264
EA+ F +M G P++ TML +L AC LG + +G+W+H+ + +R G
Sbjct: 298 HMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANA 357
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
T+LIDMYAKCG + A+ +F + ++ +W+AMI G A HG A A ++FS M+
Sbjct: 358 SSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRK 417
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ I P+ +TF+G+L AC+H+GM++ G F M+ + I P HY M D+L +G K
Sbjct: 418 NEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFK 477
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
EA I M +P+ ++ +LL A +H +G + L+++EP+ + V+++N
Sbjct: 478 EAEEMINTMEMEPDGVIWCSLLKACKMHG---NVELGESYAQNLIKIEPKNPGSYVLLSN 534
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
YA G W +V+ +R + + G+KK+ G S +E+ +H F G
Sbjct: 535 IYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 578
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 154/505 (30%), Positives = 247/505 (48%), Gaps = 33/505 (6%)
Query: 32 LSFLKLCCSKKHLY---QIHAQIQVSGLQN----DAQILKELVRFCTLSSSKNLTYARS- 83
++ LKL S H+ QIH Q+ G ++ + +L +S +K + Y
Sbjct: 143 MTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDD 202
Query: 84 -------------ILCNYVNDSV---------PIPWNNLIRGYAWSDRPREAVWVFIDMK 121
+ C + D++ + W +I+G A + +EA+ F +MK
Sbjct: 203 RNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 122 RRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKR 181
+G+K ++ + VL AC + +NEG Q+ A + ++ +Y + L+ Y C+
Sbjct: 263 VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLH 322
Query: 182 DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
A VFD M +++VVSW ++ + EAV F+ M+ G +PD T+ +SAC
Sbjct: 323 YAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACA 382
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
+ +L G H + I G + + +L+ +Y KCG + + LF+ M + +W+A
Sbjct: 383 NVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTA 442
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
M+ AQ G A E ++LF M + P+ VT GV+ AC+ AG+VE G RYF M +
Sbjct: 443 MVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEY 502
Query: 362 GIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVG 421
GI P HY M D+ +R+G L+EA FI MPF P+ I LLSA K +G
Sbjct: 503 GIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACR---NKGNLEIG 559
Query: 422 NEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGS 481
L+EL+P ++++ YA G W+ V+ +RR M+ +KK G SW++ G
Sbjct: 560 KWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGK 619
Query: 482 IHRFYSGYDSQVELAGIYQILETLN 506
+H F + +S L IY LE LN
Sbjct: 620 LHSFSADDESSPYLDQIYAKLEELN 644
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 150/319 (47%), Gaps = 38/319 (11%)
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRR-GIKPTEFTYPFVLKACAEISGLNEGM 149
D + WN LI GY+ S AV + M R T T +LK + ++ G
Sbjct: 100 DRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGK 159
Query: 150 QVQANVTKSGLDSDVYTNNNLVR--------------FYG-----------------SCR 178
Q+ V K G +S + + L+ FYG +C
Sbjct: 160 QIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACG 219
Query: 179 RKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
DA ++F M E+ VSW +I +N EA+ F +MK G + D+ VL
Sbjct: 220 MIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLP 278
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
AC LG ++ GK +H +I + +G+ALIDMY KC + A+ +F RM++ NV +
Sbjct: 279 ACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVS 338
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
W+AM++G Q G AEEA+++F +M+ S I P++ T + AC + +E+G ++
Sbjct: 339 WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQF----- 393
Query: 359 HVHGIKPMRIHYHTMADIL 377
H I IHY T+++ L
Sbjct: 394 HGKAITSGLIHYVTVSNSL 412
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 113/256 (44%), Gaps = 37/256 (14%)
Query: 127 PTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKV 186
P F Y ++ A A + +V + + L ++ NNL+ Y +
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARRVFDRIPQPNL----FSWNNLLLAYSKAGLISEMEST 94
Query: 187 FDDMCERSVVSWNVIITVCVENLWLGEAV-GYFVKMKDLGFEPDETTMLVVLSACTELGN 245
F+ + +R V+WNV+I + +G AV Y M+D T++ +L + G+
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAK---------------------------- 277
+SLGK +H Q+I+ G +G+ L+ MYA
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 278 ---CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
CG + A LF ME+ +V +W+AMI GLAQ+G A+EA+E F MK + + F
Sbjct: 215 LLACGMIEDALQLFRGMEKDSV-SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPF 273
Query: 335 LGVLCACNHAGMVEDG 350
VL AC G + +G
Sbjct: 274 GSVLPACGGLGAINEG 289
>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 902
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 154/467 (32%), Positives = 245/467 (52%), Gaps = 9/467 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIH + ++ + L+ F S ++ R +L V+ S +P N LI G
Sbjct: 423 QIHCLAMKHSICSNHAVGSSLIDF--YSKHGDVESCRKVLAQ-VDASSIVPRNVLIAGLV 479
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG-LDSDV 164
++R EA+ +F + R G+KP+ FT+ +L C + G QV KSG L+ D
Sbjct: 480 QNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDT 539
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDMCE-RSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
+LV Y R DA K+ +M + +++V W I++ +N + +++ F +M+
Sbjct: 540 SVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRS 599
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
PDE T +L AC+E+ LS GK +H +I+ G +A+IDMY+KCG +
Sbjct: 600 YDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIIS 659
Query: 284 ARLLFSRME-EINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
+ F ++ + ++ W++MILG A++GYA+EAL LF M++S I + VTFLGVL AC
Sbjct: 660 SFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLIACA 719
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVL 402
HAG++ +G YF M V+GI P HY D+L R GHL+EA I +PF+P+ ++
Sbjct: 720 HAGLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHLQEAQEVINELPFRPDGVIW 779
Query: 403 RALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFM 462
L+A +H + + G + L+ELEP+ S V+++N YA G W + R M
Sbjct: 780 ATYLAACRMHKDEER---GEIAAKELVELEPQNSSTYVLLSNMYAAAGNWVEAKMAREAM 836
Query: 463 KNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
+ G K G SW+ +G F + + IY++L+ L M
Sbjct: 837 REKGATKFPGCSWITVGNKTSLFLVQDKNHLGALRIYEMLDNLTRMM 883
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 176/352 (50%), Gaps = 4/352 (1%)
Query: 70 CTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW-SDRPREAVWVFIDMKRRGIKPT 128
C L++ L AR++L S + WN +I GYA S E ++ DM+ G+ PT
Sbjct: 140 CALTALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPT 199
Query: 129 EFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD 188
T+ +L A A + EG QV A + GLD++V+ ++L+ Y C DA VFD
Sbjct: 200 RSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFD 259
Query: 189 DMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSL 248
E++VV WN ++ V N + EA+ F+ MK LG E DE T + VL AC L + L
Sbjct: 260 CSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCL 319
Query: 249 GKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ 308
G+ V I+ + + A +DM++K GA+ A+ LF+ + + +W+A+++GL
Sbjct: 320 GRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTH 379
Query: 309 HGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRI 368
+ EEA+ + M ++P+ V+F V+ AC++ E G + H + H I
Sbjct: 380 NEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETG-KQIHCLAMKHSICSNHA 438
Query: 369 HYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGV 420
++ D ++ G ++ + + + IV R +L A + + + + +
Sbjct: 439 VGSSLIDFYSKHGDVESCRKVLAQV--DASSIVPRNVLIAGLVQNNREDEAI 488
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 155/328 (47%), Gaps = 10/328 (3%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN ++ G ++ EA+ +F+ MKR G++ EFTY VL ACA + G QVQ
Sbjct: 267 VMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCV 326
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K+ +D+ ++ N + + DA +F+ + + VSWN ++ N EA
Sbjct: 327 TIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEA 386
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ M G PDE + V++AC+ + GK +H ++ N +G++LID
Sbjct: 387 IHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDF 446
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+K G V R + ++++ ++ + +I GL Q+ +EA++LF + + P+ TF
Sbjct: 447 YSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTF 506
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK-----EAYTF 389
+L C G++ + H + +K ++ T + +LK +A
Sbjct: 507 SSILSGCT--GLLSS---IIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKL 561
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQ 417
++ MP N + A++S + + YQ
Sbjct: 562 LIEMPDHKNLVEWTAIVSGYAQNGYSYQ 589
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 142/305 (46%), Gaps = 3/305 (0%)
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
L N + + WN L+ G ++ EA+ + M G+ P E ++ V+ AC+ I
Sbjct: 358 LFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRA 417
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
G Q+ K + S+ ++L+ FY KV + S+V NV+I
Sbjct: 418 TETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAG 477
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-L 263
V+N EA+ F ++ G +P T +LS CT L + +GK VH ++ G +
Sbjct: 478 LVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLND 537
Query: 264 NCQLGTALIDMYAKCGAVGCA-RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM 322
+ +G +L+ Y K A +LL + N+ W+A++ G AQ+GY+ ++L F M
Sbjct: 538 DTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRM 597
Query: 323 KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGH 382
++ + P+ VTF +L AC+ + DG + H + G + + D+ ++ G
Sbjct: 598 RSYDVHPDEVTFASILKACSEMTALSDG-KEIHGLIIKSGFGSYKTATSAIIDMYSKCGD 656
Query: 383 LKEAY 387
+ ++
Sbjct: 657 IISSF 661
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 70/133 (52%)
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCA 284
G PD+ + LSAC+ LG L GK H +RG AL++MYA+CG VG A
Sbjct: 26 GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDA 85
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA 344
R +F + + W++MI G + G +EA+ LF+ M+ SP+ VT + V+CA
Sbjct: 86 RRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTAL 145
Query: 345 GMVEDGYRYFHEM 357
G +ED H M
Sbjct: 146 GRLEDARTLLHRM 158
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 113/287 (39%), Gaps = 39/287 (13%)
Query: 124 GIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDA 183
G++P +F L AC+ + L G Q + K GL S + LV Y C R DA
Sbjct: 26 GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDA 85
Query: 184 CKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
+VF + V W +I+ EAV F +M+ +G PD T + V+ A T L
Sbjct: 86 RRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTAL 145
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM-EEINVWTWSAM 302
G L AR L RM + W+A+
Sbjct: 146 GRLED-----------------------------------ARTLLHRMPAPSSTVAWNAV 170
Query: 303 ILGLAQH-GYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
I G AQ G E L+ +M+ + P TF +L A +A +G R H H
Sbjct: 171 ISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEG-RQVHAAAVRH 229
Query: 362 GIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
G+ ++ ++ A+ G + +A + + + N ++ A+L+
Sbjct: 230 GLDANVFVGSSLINLYAKCGCIGDA-ILVFDCSGEKNVVMWNAMLNG 275
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/442 (32%), Positives = 227/442 (51%), Gaps = 35/442 (7%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I W +I GYA + R EA+ + + R G+ P+ + AC+ I L G QV +
Sbjct: 384 ISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSL 443
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCR----------RKR---------------------DA 183
K+G + Y N L+ YG CR R R DA
Sbjct: 444 AVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDA 503
Query: 184 CKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
+FD+M R VVSW II+ + EAV +F M +P+ + ++LS C L
Sbjct: 504 RHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGL 563
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
G+ LG+ +H I+ G + AL+ MY KCG ++ F MEE +++TW+ I
Sbjct: 564 GSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCADSHKV-FDSMEERDIFTWNTFI 622
Query: 304 LGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
G AQHG EA++++ +M++ + PN VTF+G+L AC+HAG+V++G+++F M +G+
Sbjct: 623 TGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGL 682
Query: 364 KPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNE 423
P+ HY M D+L R G ++ A FI +MP +P+ ++ ALL A IH +G
Sbjct: 683 TPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAE---IGRR 739
Query: 424 VRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIH 483
+L EP + N V+++N Y+ +GMW +V+ +R+ MK G+ K G SW+++ +H
Sbjct: 740 AAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVH 799
Query: 484 RFYSGYDSQVELAGIYQILETL 505
F +G ++ I L+ L
Sbjct: 800 SFVTGDKQHEKIEEIDYTLQDL 821
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 120/264 (45%), Gaps = 10/264 (3%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +I GY ++ + +F M G P + + VL A + L ++
Sbjct: 189 VTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPL 248
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRD-ACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
V K+G +SDV +++ Y D A K FD M ER+ +W+ +I +
Sbjct: 249 VLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDA 308
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
A+ + + + P +T +L L+ C G ++ + + Q+ + V A+I
Sbjct: 309 AIAVYGR-DPVKSIPSQTALLTGLARC---GRITEARILFEQIPDPIVV----SWNAMIT 360
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
Y + G V A+ LF RM N +W+ MI G AQ+G +EEAL+L + + + P+ +
Sbjct: 361 GYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSS 420
Query: 334 FLGVLCACNHAGMVEDGYRYFHEM 357
AC+H G +E G R H +
Sbjct: 421 LTSSFLACSHIGALETG-RQVHSL 443
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 10/235 (4%)
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
DV + N++V Y R+ DA +F M +R++V+W V+I+ V G+ F M
Sbjct: 156 DVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMH 215
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK-CGAV 281
G PD++ VLSA T L +L + + + +++ G + +GT+++++Y + A+
Sbjct: 216 HEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASAL 275
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
A F M E N +TWS MI L+ G + A+ ++ SI P+ L L C
Sbjct: 276 DIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSI-PSQTALLTGLARC 334
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
G + + F ++ P+ + ++ M + G + EA MPF+
Sbjct: 335 ---GRITEARILFEQIP-----DPIVVSWNAMITGYMQNGMVDEAKELFDRMPFR 381
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 110/253 (43%), Gaps = 37/253 (14%)
Query: 142 ISGLNEGMQVQANVTKSGLD--SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWN 199
I+ L+ G ++ A + G D + + L+ C R +A +F+ + + VVSWN
Sbjct: 297 IAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQIPDPIVVSWN 356
Query: 200 VIITVCVENLWLGEAVGYFVKMK------------------------DL-------GFEP 228
+IT ++N + EA F +M DL G P
Sbjct: 357 AMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLP 416
Query: 229 DETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLF 288
+++ AC+ +G L G+ VH ++ G N + ALI MY KC + R +F
Sbjct: 417 SLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVF 476
Query: 289 SRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVE 348
+RM + +W++ I L Q+ E+A +F NM +S + V++ ++ A A +
Sbjct: 477 NRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNM----LSRDVVSWTTIISAYAQAERGD 532
Query: 349 DGYRYFHEMEHVH 361
+ +F M H H
Sbjct: 533 EAVEFFKTMLHEH 545
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 114/267 (42%), Gaps = 22/267 (8%)
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
D ++ +R R R+A +VFD M R +++WN +I+ + L +A F
Sbjct: 32 DKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILF---- 87
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
D + T ++LS LG + + V + ER TV A++ Y + G +
Sbjct: 88 DAISGGNVRTATILLSGYARLGRVLDARRVFDGMPERNTV----AWNAMVSCYVQNGDIT 143
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
AR LF M +V +W++M+ G +A LF M ++ V G +
Sbjct: 144 MARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQ 203
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI---LARAGHLKEAYTFIMNMPFQPNP 399
H G+ F M H G P + ++ ++ L G L+ ++ F+ +
Sbjct: 204 HG----KGWDIFRMMHH-EGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDV 258
Query: 400 IVLRALLS-----ASSIHDA-KYQDGV 420
++ ++L+ AS++ A K+ DG+
Sbjct: 259 VIGTSILNVYTRDASALDIAIKFFDGM 285
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 97/243 (39%), Gaps = 53/243 (21%)
Query: 101 IRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGL 160
IR A R REA VF M R I + ++ A SG+ E ++ + G
Sbjct: 40 IRELARLGRLREAREVFDAMPHRDI----IAWNSMISAYCN-SGMLEDARILFDAISGG- 93
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK 220
+V T L+ Y R DA +VFD M ER+ V+WN +++ V+N
Sbjct: 94 --NVRTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQN------------ 139
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
G++++ + +L + + +++ Y
Sbjct: 140 -----------------------GDITMAR----RLFDAMPSRDVTSWNSMVTGYCHSRQ 172
Query: 281 VGCARLLFSRMEEINVWTWSAMILG---LAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
+ A LF +M + N+ TW+ MI G + QHG + ++F M + SP+ F V
Sbjct: 173 MVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHG---KGWDIFRMMHHEGASPDQSNFASV 229
Query: 338 LCA 340
L A
Sbjct: 230 LSA 232
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 143/464 (30%), Positives = 247/464 (53%), Gaps = 7/464 (1%)
Query: 48 HAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWS 107
H+ + G+ ND +L LV + S+ T + +++ + + I WN +I GY +
Sbjct: 269 HSYVLALGMGNDVFVLTSLV---DMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQN 325
Query: 108 DRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTN 167
E+ +F + + G T +++ C++ S L G + + + + L+S + +
Sbjct: 326 GMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLS 385
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
+V Y C + A VF M +++V++W ++ +N + +A+ F +M++
Sbjct: 386 TAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVA 445
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
+ T++ ++ C LG+L+ G+ VH I G + + +ALIDMYAKCG + A L
Sbjct: 446 ANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKL 505
Query: 288 FSRMEEI-NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
F+ + +V ++MI+G HG+ AL ++S M + PN TF+ +L AC+H+G+
Sbjct: 506 FNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGL 565
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALL 406
VE+G FH ME H ++P HY + D+ +RAG L+EA + MPFQP+ VL ALL
Sbjct: 566 VEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALL 625
Query: 407 SASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVG 466
S H +G ++ RL+ L+ S V+++N YAE WE V+ +R M+ G
Sbjct: 626 SGCRTHK---NTNMGIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQG 682
Query: 467 LKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+KK+ G S +E+G ++ F++ DS A IYQ+LE L L ++
Sbjct: 683 MKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLENLRLEVE 726
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 188/356 (52%), Gaps = 10/356 (2%)
Query: 73 SSSKNLTYARSILCNY--VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIK 126
SS N R L + V D +P + WN++I GY E++ +F++M G++
Sbjct: 184 SSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLR 243
Query: 127 PTEFTYPFVLKACAEISGLNE-GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACK 185
P+ T +LKAC + SGL + GM + V G+ +DV+ +LV Y + A
Sbjct: 244 PSPVTMANLLKACGQ-SGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAAL 302
Query: 186 VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGN 245
VFD MC RS++SWN +I+ V+N + E+ F ++ G D T++ ++ C++ +
Sbjct: 303 VFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSD 362
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
L G+ +H +I + + L TA++DMY+KCGA+ A ++F RM + NV TW+AM++G
Sbjct: 363 LENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVG 422
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKP 365
L+Q+GYAE+AL+LF M+ ++ N VT + ++ C H G + G R H HG
Sbjct: 423 LSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKG-RTVHAHFIRHGYAF 481
Query: 366 MRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHD-AKYQDGV 420
+ + D+ A+ G + A N + I+ +++ +H +Y GV
Sbjct: 482 DAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGV 537
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 170/368 (46%), Gaps = 13/368 (3%)
Query: 43 HLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP----WN 98
H+ IHAQI + + ++ + +L+R S L +AR++ D +P N
Sbjct: 62 HVKSIHAQIIKNWVSTESFLAAKLIR--VYSDLGFLGHARNVF-----DQCSLPETAVCN 114
Query: 99 NLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
+I G+ + + E +F M I+ +T F LKAC ++ GM++ +
Sbjct: 115 AMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRR 174
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
G +Y +++V F DA KVFD M E+ VV WN II V+ E++ F
Sbjct: 175 GFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMF 234
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
++M G P TM +L AC + G +G H ++ G + + T+L+DMY+
Sbjct: 235 LEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNL 294
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
G G A L+F M ++ +W+AMI G Q+G E+ LF + S + T + ++
Sbjct: 295 GDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLI 354
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
C+ +E+G R H ++ + + D+ ++ G +K+A T + + N
Sbjct: 355 RGCSQTSDLENG-RILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQA-TIVFGRMGKKN 412
Query: 399 PIVLRALL 406
I A+L
Sbjct: 413 VITWTAML 420
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 152/453 (33%), Positives = 229/453 (50%), Gaps = 40/453 (8%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
I WN++I GYA + EA+ +F D+ GI+ FT VL ACA+++ L G +V A
Sbjct: 242 ISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVHA 301
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT--VC------ 205
GL + + LV Y C + A FD + ER +WNV+I+ C
Sbjct: 302 QAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLEN 361
Query: 206 VENL---------------WLGEAVGY------------FVKMKDLGFEPDETTMLVVLS 238
++NL W G G+ F +M+ PD T+ ++L
Sbjct: 362 IQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILP 421
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
AC L ++ GK VH I +G L+ +G AL+DMYAKCG++ A +++R+ N+ +
Sbjct: 422 ACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVS 481
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
+AM+ A HG+ +E + LF NM + P++VTFL VL +C HAG VE G+ +F M
Sbjct: 482 QNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMT 541
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD 418
+ + + P HY + D+L+RAG L EAY + +P +P+ ++ ALL I
Sbjct: 542 Y-YNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWG---NV 597
Query: 419 GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVEL 478
+G L+ELEP + N V++AN YA G W + R+ +K+ G+ K G SW+E
Sbjct: 598 ELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQMIKDRGMHKSPGCSWIED 657
Query: 479 GGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
IH F S S + IY L+ LN HM+
Sbjct: 658 REDIHVFLSCDKSHEKTEDIYTTLDNLNTHMRT 690
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 198/458 (43%), Gaps = 78/458 (17%)
Query: 33 SFLKLCCSKKHLYQIHAQIQVSGLQN----DAQILKELVRFCTLSSSKNLTYARSILCNY 88
S L+ C + Q+HA +G + ++L+ RF L + NL + + N
Sbjct: 67 SLLESCRTLNLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDA-NLVFVKMPQRNL 125
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
+ W ++ + EA+ +F ++ I F +P VLK C + L G
Sbjct: 126 YS------WTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELG 179
Query: 149 MQVQANVTKSGLD-------------SDVYTNNNLVRFYGSCRRKRDACKVFDDM--CER 193
Q+ V K D +V + N ++ Y A ++FD M +
Sbjct: 180 RQLHGVVIKRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGK 239
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKM-KDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
+SWN +I+ +NL EA+ F + + G E D T+ VL+AC ++ +L GK V
Sbjct: 240 DTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEV 299
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLF---------------------SRM 291
H Q + RG N +G AL++MY+KC + A+L F +++
Sbjct: 300 HAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQL 359
Query: 292 EEI--------------NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
E I NV+TW+ +I G ++G+ E AL LF+ M+ SS+ P+ T +
Sbjct: 360 ENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGII 419
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIK---PMRIHY-HTMADILARAGHLKEAYTFIMNM 393
L AC + G + H H I+ + +H + D+ A+ G +K A + N
Sbjct: 420 LPACARLATIARGKQV-----HAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQ-VYNR 473
Query: 394 PFQPNPIVLRALLSASSIHD------AKYQDGVGNEVR 425
PN + A+L+A ++H A +++ +GN R
Sbjct: 474 ISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFR 511
>gi|359475492|ref|XP_002269319.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 532
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 154/429 (35%), Positives = 233/429 (54%), Gaps = 16/429 (3%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA--- 153
W +LI G A S + E + +F M + ++P T VL AC+++ + V
Sbjct: 10 WTSLIAGSAQSGQTEEVLRLFFMMVKENLRPENDTIVSVLSACSKLEAVEIEKWVMILSE 69
Query: 154 --NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC---ERSVVSWNVIITVCVEN 208
N +G N L YG + + FD++ +RSV+ WNVII+ V+N
Sbjct: 70 FINDDDTGSFGRDSVNTVLAYLYGKWGKVEKCKERFDEIVGIGKRSVLPWNVIISAYVQN 129
Query: 209 LWLGEAVGYF-VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG----TVL 263
EA+ F V ++DL P+ TM+ VLSAC ++G+L LGKW+H + G
Sbjct: 130 GCSFEALSLFRVMIEDLNLRPNHVTMVSVLSACAQVGDLDLGKWIHGYVKSEGCKAIVES 189
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
N L TALIDMY+KCG +G A+ +F +M +V +++AMI+GLA +G EEAL LFS M+
Sbjct: 190 NTFLATALIDMYSKCGNLGKAKDVFEQMVSKDVVSFNAMIMGLAINGEGEEALRLFSKMQ 249
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
S+ PN TFLGVLCAC+H+G+++ G + F +M + P HY D+LAR G L
Sbjct: 250 ELSLRPNSGTFLGVLCACSHSGLLDTGRQMFLDMIPHFSVPPELEHYACYVDLLARVGLL 309
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
+EA+ + +MPF PN V ALL +H + + +V ++L++++P S V+ +
Sbjct: 310 EEAFEVVASMPFVPNNFVWGALLQGCRLHS---RLELAQDVSQKLVKVDPENSAGYVMFS 366
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N A W +VS +R M+ G++K G SW+ + +H F +G S ++ IY L
Sbjct: 367 NALASDQQWGEVSGLRWLMREKGVRKHPGCSWISVNRVVHEFLAGSLSHPQIDSIYHTLN 426
Query: 504 TLNLHMKVL 512
L MKV
Sbjct: 427 GLVKEMKVF 435
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 168/493 (34%), Positives = 251/493 (50%), Gaps = 31/493 (6%)
Query: 29 RQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
+ C S L + K Q H Q V G Q+D + L+ S+ L AR +
Sbjct: 84 KACSSLLDIFSGK----QTHQQAFVFGYQSDIFVSSALI--VMYSTCGKLEDARKVF--- 134
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDM--KRRGIKPTEFTYPF----VLKA 138
D +P + W ++IRGY + +AV +F D+ + T F V+ A
Sbjct: 135 --DEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISA 192
Query: 139 CAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDAC--KVFDDMCERSVV 196
C+ ++ + + V K G D V N L+ Y A K+FD + ++ V
Sbjct: 193 CSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRV 252
Query: 197 SWNVIITVCVENLWLGEAVGYF---VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
S+N I++V ++ EA F +K K + F T+ VL A + G L +GK +H
Sbjct: 253 SYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNC--ITLSTVLLAVSHSGALRIGKCIH 310
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
Q+I G + +GT++IDMY KCG V ARL F RM+ NV +W+AMI G HG+A
Sbjct: 311 DQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAA 370
Query: 314 EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
+ALELF M +S + PNY+TF+ VL AC+HAG+ + G+ +F+ M+ G++P HY M
Sbjct: 371 KALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCM 430
Query: 374 ADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP 433
D+L RAG L++AY I M +P+ I+ +LL+A IH + RL EL+P
Sbjct: 431 VDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVA---RLFELDP 487
Query: 434 RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQV 493
+++++ YA+ G W+ V VR MKN GL K G S +EL G +H F G +
Sbjct: 488 SNCGYYMLLSHIYADSGRWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHP 547
Query: 494 ELAGIYQILETLN 506
+ IY+ L LN
Sbjct: 548 QREKIYEFLAELN 560
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 169/339 (49%), Gaps = 28/339 (8%)
Query: 69 FCTLS---------SSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFID 119
FC++S +NLT ++ YV+ + WN++I A S EA+ F
Sbjct: 10 FCSVSRLLHTERHTERQNLT---TLFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSS 66
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M++ + PT ++P +KAC+ + + G Q G SD++ ++ L+ Y +C +
Sbjct: 67 MRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGK 126
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE--PDETTMLV-- 235
DA KVFD++ +R++VSW +I N +AV F KDL E D+ TM +
Sbjct: 127 LEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLF---KDLLIEENDDDATMFLDS 183
Query: 236 -----VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC--GAVGCARLLF 288
V+SAC+ + L + +H +I+RG +G L+D YAK G V AR +F
Sbjct: 184 MGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIF 243
Query: 289 SRMEEINVWTWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGMV 347
++ + + ++++++ AQ G + EA ++F + K ++ N +T VL A +H+G +
Sbjct: 244 DQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGAL 303
Query: 348 EDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
G + H+ G++ I ++ D+ + G ++ A
Sbjct: 304 RIG-KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETA 341
>gi|359493517|ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 162/516 (31%), Positives = 254/516 (49%), Gaps = 47/516 (9%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
L+ L+ C HL Q+ A + G +L+RFCTL+ S NL+YAR I ++V
Sbjct: 59 LALLERCIHLNHLKQLQAFLITLGHAQTHFYAFKLLRFCTLALS-NLSYARFIF-DHVES 116
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
+ +I YA A+ ++ +M +RR P F YP VLK+C ++ G
Sbjct: 117 PNVYLYTAMITAYASHSDHTSALLLYRNMVRRRRPWPNHFIYPHVLKSCTQVVGPGSARM 176
Query: 151 VQANVTKSGLDS--------------------------DVYTNNNLVRF------YGSCR 178
V V +SG + D T N+V + Y
Sbjct: 177 VHCQVLRSGFEQYPVVQTALLDAYLRFWSDVESARLLFDEMTERNVVSWTAMISGYTRLG 236
Query: 179 RKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL-------GFEPDET 231
+ +A +F++M ER V SWN +I +N EA+ F +M + G P++
Sbjct: 237 QIGNAVLLFEEMPERDVPSWNALIAGYTQNGLFMEALSLFRRMIAVEAGAWGQGNRPNQV 296
Query: 232 TMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM 291
T + LSAC G L LGKW+H + G L+ + AL+DMY KCG + AR +F R
Sbjct: 297 TAVCSLSACGHTGMLRLGKWIHGYVYRNGLGLDSFVSNALVDMYGKCGCLKEARRVFDRT 356
Query: 292 EEINVWTWSAMILGLAQHGYAEEALELFSNMKN--SSISPNYVTFLGVLCACNHAGMVED 349
E ++ +W++MI LA HG ++ A+ +F M S + P+ VTF+G+L AC H G+VE
Sbjct: 357 LERSLTSWNSMINCLALHGQSQNAISVFEEMMTCGSGVKPDEVTFIGLLNACTHGGLVEK 416
Query: 350 GYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSAS 409
G+ YF M +GI+P HY + D+L RAG +EA + M +P+ ++ +LL+
Sbjct: 417 GWLYFELMTQNYGIEPQIEHYGCLVDLLGRAGQFEEAMEVVRGMRIEPDEVIWGSLLNGC 476
Query: 410 SIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKK 469
IH + ++L++++P +++AN Y E+G W++V VR+ +K K
Sbjct: 477 KIHG---HTDLAEFSIKKLIDMDPNNGGYGIMLANIYGELGKWDEVRKVRKVLKEQNAHK 533
Query: 470 MKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
G SW+E+ +H+FYS + IY LE+L
Sbjct: 534 TPGCSWIEIDNQVHQFYSVDKTHPRTEEIYNTLESL 569
>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 589
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 150/461 (32%), Positives = 240/461 (52%), Gaps = 12/461 (2%)
Query: 55 GLQNDAQILK-ELVRFCTLSSSKNLTYARSILC-------NYVNDSVPIPWNNLIRGYAW 106
GLQ AQ LK V +S++ Y + LC N +++ + +N LI G+
Sbjct: 120 GLQVHAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVE 179
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+ +P + + F M+++G P FT+ +L C GMQ+ + K L+ +
Sbjct: 180 NQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFI 239
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
N ++ Y +A KVF + E+ ++SWN ++T C A+ F M D+ F
Sbjct: 240 GNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCF 299
Query: 227 -EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+PD+ T VL+AC L ++ GK +H LI + + AL++MYAKCG++ +
Sbjct: 300 VKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSY 359
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F R + N+ +W+ +I HG ALE F MK I P+ VTF+G+L ACNHAG
Sbjct: 360 DVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAG 419
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+VE+G YF+ ME +GI P H+ + D+L RAG L+EA ++ +PF +PI+L +L
Sbjct: 420 LVEEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSL 479
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
LSA +H +G + +LL+L+P + V+++N YA MW V+ + +K
Sbjct: 480 LSACRLHGDMV---IGEHLATQLLKLQPVTTSPYVLLSNLYASDEMWGGVAEAWKMLKYS 536
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
GLKK G S +++ G +F G S + I ++ LN
Sbjct: 537 GLKKEPGHSLIDVMGMFEKFTMGDLSHSRIEEIKDTIKMLN 577
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 171/363 (47%), Gaps = 19/363 (5%)
Query: 33 SFLKLCCSKK---HLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S L C K H +HA +G+ +D + ++ S N+ +AR + + +
Sbjct: 8 SLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINL--YSKCGNVIFARRMF-DEM 64
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+D + W+ +I GY + +P A+ +F M+ I P E+ + V+ ACA ++ L++G+
Sbjct: 65 SDRNLVSWSAIISGYDQTGQPLLALNLFSQMR---IVPNEYVFASVISACASLTALSQGL 121
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
QV A K G S + +N L+ Y C DA V + M E + VS+N +I VEN
Sbjct: 122 QVHAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQ 181
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+ + F M+ GF PD T +L CT + G +H Q+I+ + +G
Sbjct: 182 QPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGN 241
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS-IS 328
+I MY+K + A +F ++E ++ +W+ ++ E AL +F +M + +
Sbjct: 242 VIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVK 301
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIH----YHTMADILARAGHLK 384
P+ TF GVL AC + G + H H I+ + + + ++ A+ G +K
Sbjct: 302 PDDFTFAGVLAACAGLASIRHGKQI-----HGHLIRTRQYQDVGVSNALVNMYAKCGSIK 356
Query: 385 EAY 387
+Y
Sbjct: 357 NSY 359
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 159/471 (33%), Positives = 250/471 (53%), Gaps = 16/471 (3%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSS-SKNLTYARSILCNYVNDSVPIPWNNLIRGY 104
Q+H+ GL +DA + LV S+ + + YA + + V I W LI GY
Sbjct: 275 QLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDV-ISWTALISGY 333
Query: 105 AWSD-RPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD 163
S + + + +F +M IKP TY +LK+CA IS + G QV A+V KS S
Sbjct: 334 VQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASA 393
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
N LV Y +A +VF+ + ERS++ C+ V+M D
Sbjct: 394 HTVGNALVSMYAESGCMEEARRVFNQLYERSMIP-------CITEGRDFPLDHRIVRM-D 445
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
+G +T ++SA +G L+ G+ +H ++ G + + +L+ MY++CG +
Sbjct: 446 VGIS--SSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLED 503
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A F+ +++ NV +W++MI GLA+HGYAE AL LF +M + + PN VT++ VL AC+H
Sbjct: 504 ACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSH 563
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
G+V +G YF M+ HG+ P HY M D+LAR+G +KEA FI MP + + +V +
Sbjct: 564 VGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWK 623
Query: 404 ALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMK 463
LL A HD VG + ++ELEPR V+++N YA+ G+W++V+ +R M+
Sbjct: 624 TLLGACRSHD---NIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMR 680
Query: 464 NVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ L K G+SW+E+ + H F +G S IY L+TL +K + +
Sbjct: 681 DNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVRQIKGMGY 731
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 147/303 (48%), Gaps = 17/303 (5%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKAC--AEISGLNEGMQVQ 152
+ W + A + R ++ + +M G+ P +T AC E+ G V
Sbjct: 117 VSWTAMASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELY-CLVGGVVL 175
Query: 153 ANVTKSGL-DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
V K GL +DV + L+ A KVFD + E++VV W ++I+ V+
Sbjct: 176 GLVHKMGLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECA 235
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
EAV F+ + GFEPD TM ++SACTELG++ LG +H + G + + L
Sbjct: 236 EEAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGL 295
Query: 272 IDMYAKCG---AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE-EALELFSNMKNSSI 327
+DMYAK A+ A +F RM + +V +W+A+I G Q G E + + LF M N SI
Sbjct: 296 VDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESI 355
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL----ARAGHL 383
PN++T+ +L +C + G + H H IK + HT+ + L A +G +
Sbjct: 356 KPNHITYSSILKSCASISDHDSGRQV-----HAHVIKSNQASAHTVGNALVSMYAESGCM 410
Query: 384 KEA 386
+EA
Sbjct: 411 EEA 413
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 83/204 (40%), Gaps = 23/204 (11%)
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVCVENLWLGEAVGYF 218
LD D N+L+ Y C A VFD M R +VSW + + N ++
Sbjct: 80 LDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERGSLLLI 139
Query: 219 VKMKDLGFEPDETTMLVVLSAC------------TELGNLSLGKWVHLQLIERGTVLNCQ 266
+M + G P+ T+ AC +G W GT +
Sbjct: 140 GEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGLW--------GT--DVA 189
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+G+ALIDM A+ G + AR +F + E V W+ +I Q AEEA+ELF +
Sbjct: 190 VGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDG 249
Query: 327 ISPNYVTFLGVLCACNHAGMVEDG 350
P+ T ++ AC G V G
Sbjct: 250 FEPDRYTMSSMISACTELGSVRLG 273
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 8/104 (7%)
Query: 244 GNLSLGKWVHLQLIERGTVLN--CQLGTALIDMYAKCGAVGCARLLFSRMEEI-NVWTWS 300
G+L LG+ +H +L+ RG +L+ + +L+ +Y++CGAV AR +F M + ++ +W+
Sbjct: 62 GDLRLGRALHRRLL-RGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWT 120
Query: 301 AMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA 344
AM LA++G +L L M S + PN T LCA HA
Sbjct: 121 AMASCLARNGAERGSLLLIGEMLESGLLPNAYT----LCAAAHA 160
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 153/504 (30%), Positives = 251/504 (49%), Gaps = 33/504 (6%)
Query: 32 LSFLKLCCSKKHLY---QIHAQIQVSGLQN----DAQILKELVRFCTLSSSKNLTYARS- 83
++ LKL S H+ QIH Q+ G ++ + +L + +S +K + Y
Sbjct: 140 MTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDD 199
Query: 84 -------------ILCNYVNDSV---------PIPWNNLIRGYAWSDRPREAVWVFIDMK 121
+ C + D++ + W+ +I+G A + +EA+ F +MK
Sbjct: 200 RNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFREMK 259
Query: 122 RRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKR 181
G+K ++ + VL AC + +N+G Q+ A + ++ L +Y + L+ Y C+
Sbjct: 260 IEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLH 319
Query: 182 DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
A VFD M +++VVSW ++ + GEAV F+ M+ G +PD T+ +SAC
Sbjct: 320 YAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACA 379
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
+ +L G H + I G + + +L+ +Y KCG + + LF+ M + +W+A
Sbjct: 380 NISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTA 439
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
M+ AQ G A EA++LF M + P+ VT GV+ AC+ AG+VE G RYF M + +
Sbjct: 440 MVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEY 499
Query: 362 GIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVG 421
GI P HY M D+ +R+G ++EA FI MPF+P+ I LLSA K +G
Sbjct: 500 GIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACR---NKGNLEIG 556
Query: 422 NEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGS 481
L+EL+P ++++ YA G W+ V+ +RR MK ++K G SW++ G
Sbjct: 557 KWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIKWKGK 616
Query: 482 IHRFYSGYDSQVELAGIYQILETL 505
+H F + +S IY LE L
Sbjct: 617 LHSFSADDESSPYSDQIYAKLEEL 640
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 151/319 (47%), Gaps = 38/319 (11%)
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVF-IDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
D + WN LI GY+ S AV + MK T T +LK + ++ G
Sbjct: 97 DRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGK 156
Query: 150 QVQANVTKSGLDS---------DVYTNNNLVR-----FYG-----------------SCR 178
Q+ V K G +S D+Y+ + FYG +C
Sbjct: 157 QIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACG 216
Query: 179 RKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
DA ++F M E+ VSW+ +I +N EA+ F +MK G + D+ VL
Sbjct: 217 MIEDALQLFRGM-EKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLP 275
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
AC LG ++ G+ +H +I + +G+ALIDMY KC + A+ +F RM++ NV +
Sbjct: 276 ACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVS 335
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
W+AM++G Q G A EA+++F +M+ S I P++ T + AC + +E+G ++
Sbjct: 336 WTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQF----- 390
Query: 359 HVHGIKPMRIHYHTMADIL 377
H I IHY T+++ L
Sbjct: 391 HGKAITAGLIHYITVSNSL 409
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 106/225 (47%), Gaps = 34/225 (15%)
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV-GYFVKM 221
++++ NNL+ Y + + F+ + +R V+WNV+I + +G AV Y M
Sbjct: 68 NLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 127
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK---- 277
KD T++ +L + G++SLGK +H Q+I+ G +G+ L+DMY+K
Sbjct: 128 KDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCI 187
Query: 278 ---------------------------CGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
CG + A LF ME+ +V +WSAMI GLAQ+G
Sbjct: 188 SDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSV-SWSAMIKGLAQNG 246
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
+EA+E F MK + + F VL AC G + DG R H
Sbjct: 247 MEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDG-RQIH 290
>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
Length = 785
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 155/490 (31%), Positives = 247/490 (50%), Gaps = 29/490 (5%)
Query: 33 SFLKLCCSK----KHLYQ-IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
S +K C S +H+ + +H + +GL D + ++ ++ R L N
Sbjct: 209 SIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMI---------DMYAKRGALTN 259
Query: 88 YVN--DSVPIP----WNNLIRGYAWSDRP------REAVWVFIDMKRRGIKPTEFTYPFV 135
V SVP P +N +I G+ + REA+ ++ +M+ RG++P+EFT+ +
Sbjct: 260 AVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSI 319
Query: 136 LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSV 195
L+AC G Q+ V K D Y + L+ Y D + F + ++ +
Sbjct: 320 LRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDI 379
Query: 196 VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQ 255
V+W +I+ CV+N +A+ F + G +PD TM V++AC L G+ +
Sbjct: 380 VTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCL 439
Query: 256 LIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEA 315
I+ G +G + I M A+ G V F ME +V +WSA+I AQHG A +A
Sbjct: 440 AIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDA 499
Query: 316 LELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMAD 375
L +F+ M N+ ++PN VTFL VL AC+H G+V+DG RY+ M++ +G+ P H + D
Sbjct: 500 LRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVD 559
Query: 376 ILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
+L RAG L +A FI + F + +V R+LL++ IH + G V ++++LEP
Sbjct: 560 LLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMER---GQLVADQIMDLEPTS 616
Query: 436 SQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVEL 495
S + VI+ N Y + G S R MK G+KK G+SW+EL +H F +G S E
Sbjct: 617 SASYVILYNMYLDAGELSLASKTRDLMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPES 676
Query: 496 AGIYQILETL 505
IY+ L +
Sbjct: 677 NAIYKKLAEM 686
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 175/386 (45%), Gaps = 35/386 (9%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILCNYVN 90
L L+ C + H+ +HA I + + L+ +C L L AR I
Sbjct: 6 LDLLRSCTALPHVAAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLI------ 59
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRR-GIKPTEFTYPFVLKACAEISGL 145
D +P + +N LI Y+ + P A+ F + G++ FTY L AC+ L
Sbjct: 60 DEMPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDL 119
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
G V A GL + V+ +N+L Y SC +A +VFD E VSWN +++
Sbjct: 120 RTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGY 179
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLS--LGKWVHLQLIERGTVL 263
V E + F M G + + ++ C ++ + + VH +++ G
Sbjct: 180 VRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDA 239
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA------EEALE 317
+ L +A+IDMYAK GA+ A LF + + NV ++AMI G + A EAL
Sbjct: 240 DLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALS 299
Query: 318 LFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH------ 371
L+S M++ + P+ TF +L ACN AG E G+ + +HG + ++ +H
Sbjct: 300 LYSEMQSRGMQPSEFTFSSILRACNLAG--EFGFG-----KQIHG-QVLKHSFHDDDYIG 351
Query: 372 -TMADILARAGHLKEAYTFIMNMPFQ 396
+ D+ + +G +++ Y ++P Q
Sbjct: 352 SALIDLYSDSGCMEDGYRCFRSLPKQ 377
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 146/322 (45%), Gaps = 26/322 (8%)
Query: 129 EFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCR----RKRDAC 184
E Y +L++C + L V A++ ++ + ++ N+L+ Y CR A
Sbjct: 2 EAFYLDLLRSC---TALPHVAAVHAHIARAHPTASLFLRNSLLAAY--CRLGVGAPLHAA 56
Query: 185 KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL-GFEPDETTMLVVLSACTEL 243
++ D+M R+ VS+N++I+ G A+ F + + G D T L+AC+
Sbjct: 57 RLIDEMPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRA 116
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
+L GK VH + G L +L MYA CG +G AR +F EE + +W++++
Sbjct: 117 LDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLL 176
Query: 304 LGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH---- 359
G + G EE L++FS M + + N LG + C +G D R+ E H
Sbjct: 177 SGYVRAGAREETLKVFSLMCHHGLGWNSFA-LGSIIKCCASG--SDVGRHIAEAVHGCVV 233
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
G+ M D+ A+ G L A ++P PN IV A+++ +A
Sbjct: 234 KAGLDADLFLASAMIDMYAKRGALTNAVALFKSVP-DPNVIVFNAMIAGFCRDEA----A 288
Query: 420 VGNEVRRRLL----ELEPRGSQ 437
VG EV R L E++ RG Q
Sbjct: 289 VGKEVSREALSLYSEMQSRGMQ 310
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 220/416 (52%), Gaps = 3/416 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ +N +I GYA S +A+ + +M +KP FT VL +E + +G ++
Sbjct: 172 VSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGY 231
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V + G+DSDVY ++LV Y R D+ +VF + R +SWN ++ V+N EA
Sbjct: 232 VIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEA 291
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M P V+ AC L L LGK +H ++ G N + +AL+DM
Sbjct: 292 LRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDM 351
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG + AR +F RM + +W+A+I+G A HG+ EA+ LF MK + PN V F
Sbjct: 352 YSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAF 411
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ VL AC+H G+V++ + YF+ M V+G+ HY +AD+L RAG L+EAY FI M
Sbjct: 412 VAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMR 471
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
+P V LLS+ S+H + +V ++ ++ V++ N YA G W++
Sbjct: 472 VEPTGSVWSTLLSSCSVHK---NLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKE 528
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
++ +R ++ GL+K SW+E+ H F SG S + I + L+ + M+
Sbjct: 529 MAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQME 584
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 147/314 (46%), Gaps = 10/314 (3%)
Query: 40 SKKHLYQIHAQ-IQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP--IP 96
SK Q+HAQ I+ L + + + +S NL L + P +
Sbjct: 20 SKSQAKQLHAQFIRTQSLSHTSASI-------VISIYTNLKLLHEALLVFKTLESPPVLA 72
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
W ++IR + A+ F++M+ G P +P VLK+C + L G V +
Sbjct: 73 WKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIV 132
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
+ G+D D+YT N L+ Y KVF+ M + VVS+N +I ++ +A+
Sbjct: 133 RLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALR 192
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
+M +PD T+ VL +E ++ GK +H +I +G + +G++L+DMYA
Sbjct: 193 MVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYA 252
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
K + + +FS + + +W++++ G Q+G EAL LF M ++ + P V F
Sbjct: 253 KSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSS 312
Query: 337 VLCACNHAGMVEDG 350
V+ AC H + G
Sbjct: 313 VIPACAHLATLHLG 326
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 153/472 (32%), Positives = 249/472 (52%), Gaps = 15/472 (3%)
Query: 48 HAQIQVSGLQND---AQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGY 104
HAQI GL+ D + +L + C+L S + N + + WN +I
Sbjct: 66 HAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKF------NEMPVKSLVSWNTVIGAL 119
Query: 105 AWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDV 164
+ REA+ + I M+R G EFT VL CA + E MQ+ A K+ +DS+
Sbjct: 120 TQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNC 179
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL 224
+ L+ Y C +DA ++F+ M E++ V+W+ ++ V+N + EA+ F + +
Sbjct: 180 FVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLM 239
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCA 284
GF+ D + +SAC L L GK VH + G N + ++LIDMYAKCG + A
Sbjct: 240 GFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREA 299
Query: 285 RLLFSRMEEI-NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
L+F + E+ ++ W+AMI G A+H A EA+ LF M+ P+ VT++ VL AC+H
Sbjct: 300 YLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSH 359
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
G+ E+G +YF M H + P +HY M DIL RAG + +AY I MPF +
Sbjct: 360 MGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWG 419
Query: 404 ALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFM 462
+LL++ I+ + ++ + + L E+EP + N +++AN YA W++V+ R+ +
Sbjct: 420 SLLASCKIYGNIEFAEIAA----KYLFEMEPNNAGNHILLANIYAANKKWDEVARARKLL 475
Query: 463 KNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ ++K +G SW+E+ IH F G + ++ IY L+ L + +K LN+
Sbjct: 476 RETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLNY 527
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 134/279 (48%), Gaps = 1/279 (0%)
Query: 134 FVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER 193
++L+ CA+ G A + + GL+ D+ T+N L+ Y C A K F++M +
Sbjct: 48 YLLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVK 107
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
S+VSWN +I +N EA+ ++M+ G +E T+ VL C + +H
Sbjct: 108 SLVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLH 167
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
I+ NC +GTAL+ +YAKC ++ A +F M E N TWS+M+ G Q+G+ E
Sbjct: 168 AFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHE 227
Query: 314 EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
EAL +F N + + + AC + +G + H + H G ++
Sbjct: 228 EALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEG-KQVHAISHKSGFGSNIYVSSSL 286
Query: 374 ADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
D+ A+ G ++EAY + + ++ A++S + H
Sbjct: 287 IDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARH 325
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 135/437 (30%), Positives = 235/437 (53%), Gaps = 5/437 (1%)
Query: 73 SSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
S NL A + + ++ + W ++I + EA+ +F +M+ +G++P +
Sbjct: 305 SKCGNLNGANEVFVK-MGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAV 363
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
V+ ACA + L++G +V ++ K+ + S++ +N L+ Y C +A +F +
Sbjct: 364 TSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPV 423
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
+++VSWN +I +N EA+ F+ M+ +PD+ TM VL AC L L G+ +
Sbjct: 424 KNIVSWNTMIGGYSQNSLPNEALQLFLDMQK-QLKPDDVTMACVLPACAGLAALEKGREI 482
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H ++ +G + + AL+DMY KCG + A+ LF + + ++ W+ MI G HG+
Sbjct: 483 HGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFG 542
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
+EA+ F M+ + I P +F +L AC H+G++++G++ F M+ I+P HY
Sbjct: 543 KEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYAC 602
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELE 432
M D+L R+G+L AY FI MP +P+ + ALLS IH + + +V + ELE
Sbjct: 603 MVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIH---HDVELAEKVAEHIFELE 659
Query: 433 PRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQ 492
P ++ V++AN YAE WE+V ++R + GLK +G SW+E+ G + F++G S
Sbjct: 660 PENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDTSH 719
Query: 493 VELAGIYQILETLNLHM 509
+ I +L L + M
Sbjct: 720 PQAKMIDSLLRKLTMKM 736
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 205/414 (49%), Gaps = 14/414 (3%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S L+LC K L ++H+ I +G+ D + +LV + +L R I +
Sbjct: 62 SVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYV--NCGDLVKGRRIFDGIL 119
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
ND + + WN L+ YA RE+V +F M+ GI+ +T+ VLK A + + E
Sbjct: 120 NDKIFL-WNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECK 178
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
+V V K G S N+L+ Y C A +FD++ +R VVSWN +I+ C N
Sbjct: 179 RVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNG 238
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+ + +F++M +LG + D T++ VL AC +GNL+LG+ +H ++ G
Sbjct: 239 FSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNN 298
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
L+DMY+KCG + A +F +M E + +W+++I + G EA+ LF M++ + P
Sbjct: 299 TLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRP 358
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
+ V+ AC + ++ G R H + + + + ++ A+ G ++EA
Sbjct: 359 DIYAVTSVVHACACSNSLDKG-REVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEA--- 414
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
N+ F P+ + ++S +++ Q+ + NE + L+++ + + V +A
Sbjct: 415 --NLIFSQLPV--KNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQLKPDDVTMA 464
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 142/305 (46%), Gaps = 8/305 (2%)
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
TY VL+ CAE+ L +G +V + ++ +G+ D LV Y +C ++FD +
Sbjct: 59 TYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGI 118
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
+ WN++++ + E+VG F KM++LG D T VL + K
Sbjct: 119 LNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECK 178
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
VH +++ G + +LI Y KCG V AR+LF + + +V +W++MI G +G
Sbjct: 179 RVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNG 238
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
++ LE F M N + + T + VL AC + G + G R H G +
Sbjct: 239 FSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLG-RALHAYGVKAGFSGGVMFN 297
Query: 371 HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLE 430
+T+ D+ ++ G+L A + M ++S +SI A ++G+ E E
Sbjct: 298 NTLLDMYSKCGNLNGANEVFVKMGET-------TIVSWTSIIAAHVREGLHYEAIGLFDE 350
Query: 431 LEPRG 435
++ +G
Sbjct: 351 MQSKG 355
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%)
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
E + T VL C EL +L GK VH + G ++ LG L+ MY CG + R
Sbjct: 54 ELELNTYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRR 113
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
+F + ++ W+ ++ A+ G E++ LF M+ I + TF VL
Sbjct: 114 IFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVL 165
>gi|297734524|emb|CBI15771.3| unnamed protein product [Vitis vinifera]
Length = 436
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 225/429 (52%), Gaps = 37/429 (8%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M R G P +++PFVLKACA +S L++G ++ ++ K G+ DV+ N L+ + SC
Sbjct: 1 MLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGA 60
Query: 180 KRDACKVFDDMCE--RSVVSWNVII-----------------------TVCVENLWLG-- 212
A VFD + R VVSWN +I TVC ++ G
Sbjct: 61 VEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFDRIPHRNTVCWTSMIAGYA 120
Query: 213 ------EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
EA+ F +M+ GF D T+ VLSAC G L+ G+W+HL ++
Sbjct: 121 QSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLN 180
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN-S 325
ALI MY+KCG + A +F + + ++++WSA+I GLA +G +++AL LFS M+ S
Sbjct: 181 ARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMIS 240
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
I PN +TFLGVLCACNH G V+ G YF+ M ++ + P HY M D+L RA L E
Sbjct: 241 DIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVE 300
Query: 386 AYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANK 445
A FI +P QP+ ++ R+LL A H + +++ ELEPR V+++N
Sbjct: 301 AEKFIRTLPIQPDVVIWRSLLFACRNHG---NIELAEFAAKQIEELEPRRCGARVLLSNV 357
Query: 446 YAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
YA W V VR+ M +KK G S+VE+ G +H + S E+ IY+ + ++
Sbjct: 358 YASASRWGDVKRVRKDMATQRIKKQPGCSFVEIDGLVHELFVADRSHPEMGAIYETMISI 417
Query: 506 NLHMKVLNF 514
N ++ F
Sbjct: 418 NKALQSKGF 426
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 5/166 (3%)
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D +P + W ++I GYA SD +EA+ +F +M+ G T VL AC
Sbjct: 100 VFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGA 159
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L +G + ++ ++ D+ N L+ Y C + A ++F + + + SW+ +I+
Sbjct: 160 LAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISG 219
Query: 205 CVENLWLGEAVGYFVKMKDLG-FEPDETTMLVVLSACTELGNLSLG 249
N +A+ F +M+ + P+E T L VL AC G + G
Sbjct: 220 LAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKG 265
>gi|347954502|gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virginicum]
Length = 485
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 238/451 (52%), Gaps = 36/451 (7%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM----- 149
+ W + I + R EAV F DM+ GI+P T+ +L AC +EG+
Sbjct: 22 VSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIALLSACGNFPSGSEGLGYLLH 81
Query: 150 -----------------QVQANVTKSG------------LDSDVYTNNNLVRFYGSCRRK 180
+ +KSG D + T N ++ Y +
Sbjct: 82 GYACKLGLERSHVMVGTAILGMYSKSGHLRKARLVFDYIEDKNSVTWNTMIDGYMRNGQV 141
Query: 181 RDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
+A VFD M +R ++SW +IT V+ + EA+ +F +M+ G PD ++ ++AC
Sbjct: 142 DNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIISAVAAC 201
Query: 241 TELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
T LG LS G WVH ++ + N ++ +LID+Y +CG V AR +F +ME+ V +W+
Sbjct: 202 TNLGALSFGLWVHRYVLSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWN 261
Query: 301 AMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHV 360
++I+G A +G A E+L F M+ +P+ VTF G L AC+H G+VE+G++YF M+H
Sbjct: 262 SVIVGFAANGNANESLVYFRKMQREGFTPDGVTFTGALTACSHVGLVEEGFQYFQMMKHD 321
Query: 361 HGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGV 420
+ I P HY + D+ +RAG L++A+ + +MP +PN +V+ +LL+A H +
Sbjct: 322 YRISPRIEHYGCLVDLYSRAGRLEDAFIVVESMPMKPNEVVIGSLLAACRNHGN--HTIL 379
Query: 421 GNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGG 480
+ + + +L+ + N VI++N YA G WE S +RR MK +GLKK G S +E+
Sbjct: 380 AERLMKYITDLDVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGYSSIEIDD 439
Query: 481 SIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
H F +G + VE A I ++LE ++ +++
Sbjct: 440 CTHVFMAGDSAHVETAYIREVLELISSDLRL 470
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 95/200 (47%), Gaps = 43/200 (21%)
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL--GNLSLGKW 251
++VSW IT+ + L EAV F M+ G EP+ T + +LSAC G+ LG
Sbjct: 20 TIVSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIALLSACGNFPSGSEGLGYL 79
Query: 252 VHLQL----IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN--VW-------- 297
+H +ER V+ +GTA++ MY+K G + ARL+F +E+ N W
Sbjct: 80 LHGYACKLGLERSHVM---VGTAILGMYSKSGHLRKARLVFDYIEDKNSVTWNTMIDGYM 136
Query: 298 ---------------------TWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
+W+AMI G + G+ EEAL F M+ S ++P+YV +
Sbjct: 137 RNGQVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIIS 196
Query: 337 VLCACNHAGMVEDG---YRY 353
+ AC + G + G +RY
Sbjct: 197 AVAACTNLGALSFGLWVHRY 216
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 132/306 (43%), Gaps = 41/306 (13%)
Query: 73 SSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRR--------- 123
S S +L AR + +Y+ D + WN +I GY + + AV VF M R
Sbjct: 105 SKSGHLRKARLVF-DYIEDKNSVTWNTMIDGYMRNGQVDNAVDVFDKMPDRDLISWTAMI 163
Query: 124 ----------------------GIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
G+ P + AC + L+ G+ V V
Sbjct: 164 TGFVKKGFHEEALAWFREMQISGVNPDYVAIISAVAACTNLGALSFGLWVHRYVLSQDFR 223
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
++V +N+L+ Y C A +VFD M +R+VVSWN +I N E++ YF KM
Sbjct: 224 NNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNANESLVYFRKM 283
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG--TALIDMYAKCG 279
+ GF PD T L+AC+ +G + G + + Q+++ ++ ++ L+D+Y++ G
Sbjct: 284 QREGFTPDGVTFTGALTACSHVGLVEEG-FQYFQMMKHDYRISPRIEHYGCLVDLYSRAG 342
Query: 280 AVGCARLLFSRME-EINVWTWSAMILGLAQHG----YAEEALELFSNMKNSSISPNYVTF 334
+ A ++ M + N +++ HG AE ++ +++ S S NYV
Sbjct: 343 RLEDAFIVVESMPMKPNEVVIGSLLAACRNHGNHTILAERLMKYITDLDVKSHS-NYVIL 401
Query: 335 LGVLCA 340
+ A
Sbjct: 402 SNMYAA 407
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 154/464 (33%), Positives = 248/464 (53%), Gaps = 14/464 (3%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H + SG + D+ I+ L+ ++ K+L A+ + N + + WN +I GY
Sbjct: 217 VHTHVVKSGFECDSYIVSSLIHL--YANGKDLGAAKQLF-NLCSARDVVSWNAMIDGYVK 273
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
A VF M R + ++ ++ A + ++E ++ + + L S
Sbjct: 274 HVEMGHARMVFDRMVCRDV----ISWNTMINGYAIVGKIDEAKRLFDEMPERNLVS---- 325
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
N+++ + C DA +F +M R VVSWN ++ + EA+ F +M+ +G
Sbjct: 326 WNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGV 385
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
+P E T++ +LSAC LG L G +H + + +N +GTAL+DMYAKCG + A
Sbjct: 386 KPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQ 445
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
+F+ ME +V W+ +I G+A HG +EA +LF MK + + PN +TF+ +L AC+HAGM
Sbjct: 446 VFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGM 505
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALL 406
V++G + M +GI+P HY + D+LARAG L+EA I MP +PNP L ALL
Sbjct: 506 VDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALL 565
Query: 407 SASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVG 466
IH ++ +G V +RL+ L+P S ++++N YA W+ VR MK G
Sbjct: 566 GGCRIH-GNFE--LGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNG 622
Query: 467 LKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+ K+ G+S +EL G +HRF +G S E IY+ L ++ +K
Sbjct: 623 ISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLK 666
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 196/412 (47%), Gaps = 26/412 (6%)
Query: 1 MVRFPVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDA 60
M R P P TN PSN Q LS C + +HL Q+HAQI ++ +
Sbjct: 83 MSRTPNPLTN-----PPSN---------PQILSLFNPCKTLRHLKQVHAQI-ITHHNSPF 127
Query: 61 QILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDM 120
Q+ L YA++I +++ + P +N+LIR + S P EA+ ++ M
Sbjct: 128 QLSALASLSALSPFPTFLAYAKTIF-HHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTM 186
Query: 121 KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRK 180
+ G+KP TYPFV+KAC E S G+ V +V KSG + D Y ++L+ Y + +
Sbjct: 187 LQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDL 246
Query: 181 RDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
A ++F+ R VVSWN +I V+++ +G A F +M D + +++
Sbjct: 247 GAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRM----VCRDVISWNTMINGY 302
Query: 241 TELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
+G + K + ++ ER N +++ + KCG V A LFS M +V +W+
Sbjct: 303 AIVGKIDEAKRLFDEMPER----NLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWN 358
Query: 301 AMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHV 360
+M+ AQ G EAL LF M+ + P T + +L AC H G ++ G + H +
Sbjct: 359 SMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGL-HLHTYIND 417
Query: 361 HGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
+ I+ I + D+ A+ G + A T + N + + +++ +IH
Sbjct: 418 NRIEVNSIVGTALVDMYAKCGKISLA-TQVFNAMESKDVLAWNTIIAGMAIH 468
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 153/473 (32%), Positives = 238/473 (50%), Gaps = 39/473 (8%)
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
+LT AR IL + + + I WN +I GY +A+ +F M+ G++ E TY V+
Sbjct: 238 DLTGAREIL-DTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVI 296
Query: 137 KACAEISGLNEGMQVQANVTKSGLD----------------------------------- 161
ACA+ G QV A + K+ L+
Sbjct: 297 SACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPV 356
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
D+ T N L+ Y + R +A F M E+++++W V+I+ +N + +A+ F +M
Sbjct: 357 KDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQM 416
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
K G+EP++ ++AC+ LG L G+ +H Q++ G +G A+I MYA+CG V
Sbjct: 417 KLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIV 476
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
AR +F M ++ +W++MI L QHG+ +A+EL+ M I P+ TFL VL AC
Sbjct: 477 EAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSAC 536
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIV 401
+HAG+VE+G RYF+ M +GI P HY M D+ RAG +A I +MPF+ +
Sbjct: 537 SHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPI 596
Query: 402 LRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRF 461
ALL+ H +G E +L +L P+ V+++N YA +G W V+ R+
Sbjct: 597 WEALLAGCRTHGNM---DLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKL 653
Query: 462 MKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
M++ G+KK SW E+ +H F E+ IY LE LNL MK + +
Sbjct: 654 MRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGY 706
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 129/510 (25%), Positives = 201/510 (39%), Gaps = 131/510 (25%)
Query: 23 DLLSKARQCLSFLKLCC-----SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKN 77
D+ A + + L LCC S +H + SG + I+ L+ SS +
Sbjct: 6 DVRVLANRYFAQLNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSS--D 63
Query: 78 LTYARSILCNYVNDSVPIP-------------------------------------WNNL 100
YAR + D +P P +N +
Sbjct: 64 FVYARKLF-----DEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAM 118
Query: 101 IRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI-SGLNEGMQVQANVTKSG 159
I GY+ + A+ +F M+ +P +FT+ VL A I + Q+ V K G
Sbjct: 119 ITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFG 178
Query: 160 LDSDVYTNNNLVRFYGSCRRKR---------DACKVFDDMCERSVVSWNVIITVCVEN-- 208
++ N L+ Y C A K+FD+M +R+ W +IT V N
Sbjct: 179 IEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGD 238
Query: 209 -----------------LWLGEAVGY------------FVKMKDLGFEPDETTMLVVLSA 239
W GY F KM+ LG + DE+T V+SA
Sbjct: 239 LTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISA 298
Query: 240 CTELGNLSLGKWVHLQLI------ERGTVLNCQLGTALIDMYAKCGAVGCARLLF----- 288
C + G LGK VH ++ +R +L+ +G LI +Y K G V AR +F
Sbjct: 299 CADGGFFLLGKQVHAYILKNELNPDRDFLLS--VGNTLITLYWKYGKVDGARKIFYEMPV 356
Query: 289 ----------------SRMEEI----------NVWTWSAMILGLAQHGYAEEALELFSNM 322
RMEE N+ TW+ MI GLAQ+G+ E+AL+LF+ M
Sbjct: 357 KDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQM 416
Query: 323 KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGH 382
K PN F G + AC+ G +E+G + ++ H+ + + + M + AR G
Sbjct: 417 KLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVG-NAMITMYARCGI 475
Query: 383 LKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
++ A T + MPF +P+ ++++A H
Sbjct: 476 VEAARTMFLTMPF-VDPVSWNSMIAALGQH 504
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 229/430 (53%), Gaps = 9/430 (2%)
Query: 91 DSVPI----PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P+ WN +I GYA + +EA+ +F +M + I+P E T V+ ACA+ +
Sbjct: 224 DEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIE 283
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G QV + + G S++ N+L+ Y C AC +F+ + + V+SWN +I
Sbjct: 284 LGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYT 343
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER--GTVLN 264
EA+ F +M G P++ TML +L AC LG + +G+W+H+ + +R
Sbjct: 344 HMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNA 403
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
L T+LIDMYAKCG + A +F+ + ++ +W+AMI G A HG A+ A ++FS M+
Sbjct: 404 SSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRK 463
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
I P+ +TF+G+L AC+ +GM++ G F M + I P HY M D+L +G K
Sbjct: 464 IGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFK 523
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
EA I NM +P+ ++ +LL A I + +G + L+++EP V+++N
Sbjct: 524 EAEEMINNMEMEPDGVIWCSLLKACKI---RGNVELGESFAQNLIKIEPENPGCYVLLSN 580
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILET 504
YA G W +V+ +R + + G+KK+ G S +E+ +H F G IY +LE
Sbjct: 581 IYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEE 640
Query: 505 LNLHMKVLNF 514
+ + ++ F
Sbjct: 641 MEVLLEKAGF 650
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 126/420 (30%), Positives = 206/420 (49%), Gaps = 43/420 (10%)
Query: 6 VPTTNHIFPPKPSNCNSDLLS-KARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILK 64
VP++++ F PS+ + S + LS L C + + L IHAQ+ +GL N L
Sbjct: 10 VPSSSYPFHFLPSSSDPPYDSLRNHPSLSLLHNCKTLQSLRLIHAQMIKTGLHNTNYALS 69
Query: 65 ELVRFCTLSSS-KNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRR 123
+L+ C +S L YA S+ + + + WN + RG+A S P A+ +++ M
Sbjct: 70 KLLELCVISPHFDGLPYAISVF-ETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISL 128
Query: 124 GIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDA 183
G+ P +T+PF+LK+CA+ EG Q+ +V K G D D++ + +L+ Y R DA
Sbjct: 129 GLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDA 188
Query: 184 CKVFD-------------------------------DMCERSVVSWNVIITVCVENLWLG 212
KVFD ++ + VVSWN +I+ E
Sbjct: 189 RKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYK 248
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
EA+ F +M PDE+TM+ V+SAC + G++ LG+ VH + + G N ++ +L+
Sbjct: 249 EALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLM 308
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
D+Y+KCG + A LF + +V +W+ +I G +EAL LF M S PN V
Sbjct: 309 DLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDV 368
Query: 333 TFLGVLCACNHAGMVEDGYRYFH-----EMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
T L +L AC H G ++ G R+ H ++ +R ++ D+ A+ G ++ A+
Sbjct: 369 TMLSILPACAHLGAIDIG-RWIHVYIDKRLKSATNASSLRT---SLIDMYAKCGDIEAAH 424
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 161/498 (32%), Positives = 256/498 (51%), Gaps = 42/498 (8%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKN-----LTYARSILC 86
L+ L+ C S L IH + + L +D + L+ C S+ N L YA I
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
N ++ + +N LIR ++ P +A + M + I P T+PF++KA +E+ +
Sbjct: 76 QIQNPNLFV-FNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVL 134
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSC------------RRKRDA----------C 184
G Q + + + G +DVY N+LV Y +C RD C
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 194
Query: 185 K---------VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLV 235
K +FD+M R++ +W+++I +N +A+ F MK G +ET M+
Sbjct: 195 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
V+S+C LG L G+ + +++ +N LGTAL+DM+ +CG + A +F + E +
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETD 314
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
+WS++I GLA HG+A +A+ FS M + P VTF VL AC+H G+VE G +
Sbjct: 315 SLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYE 374
Query: 356 EMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH-DA 414
M+ HGI+P HY + D+L RAG L EA FI+ M +PN +L ALL A I+ +
Sbjct: 375 NMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNT 434
Query: 415 KYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMS 474
+ + VGN L++++P S V+++N YA G W+K+ ++R MK +KK G S
Sbjct: 435 EVAERVGN----MLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWS 490
Query: 475 WVELGGSIHRFYSGYDSQ 492
+E+ G I++F G D +
Sbjct: 491 LIEIDGKINKFTMGDDQK 508
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 150/416 (36%), Positives = 232/416 (55%), Gaps = 17/416 (4%)
Query: 95 IPWNNLIRGYAWSDRPREAVW-VFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
I WN++I GYA S+ W +F +M +R + ++ ++ C + + +
Sbjct: 222 ISWNSMISGYARSEEGLRVAWELFEEMPKRDL----ISWNSMIDGCVKCGKMENAHHLFN 277
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+ K DV + N+V Y A +FD+M ER V+S N ++ V+N L E
Sbjct: 278 QMPKR----DVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLME 333
Query: 214 AVGYFVKM---KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
A+ +F M K+L PD T+L+ LSA +LG+ G +H + + G L+ +LG A
Sbjct: 334 ALNFFHDMLSRKELF--PDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVA 391
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
LIDMYAKCG++ A +F +++ ++ W+A+I GLA HG E A ELF M+ + P+
Sbjct: 392 LIDMYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPD 451
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
+TF+GVL ACNHAG+V++G F M VH ++P HY M DIL RAGH++EA F+
Sbjct: 452 DITFIGVLNACNHAGLVKEGLMCFELMRRVHKVEPKLQHYGCMVDILGRAGHVEEAKKFV 511
Query: 391 MNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVG 450
MP +PN +V R LLSA H+ +G V + L+ ++ + V+++N YA G
Sbjct: 512 EKMPIEPNDVVWRTLLSACRNHE---NFTIGEPVAKHLISVDSYNPSSYVLLSNIYAGFG 568
Query: 451 MWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
MW V +R MK LKK+ G S +EL G++H F+ S ++ IY +L++L+
Sbjct: 569 MWNDVYRIRMMMKQRDLKKIPGCSQIELEGNVHEFFVRDKSHPQVREIYSMLDSLS 624
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 156/343 (45%), Gaps = 42/343 (12%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLT-YARSILCN------YVNDSVPIPWN 98
QIH+++ +G N+ + ++ + SS K L +AR + + + P WN
Sbjct: 32 QIHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEFARYLFMSRHFGRKHRKQDNPFLWN 91
Query: 99 NLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
+I+ ++ + PREA +F M G+ +F++ VLKAC+ + + EGMQ+ + +
Sbjct: 92 AIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQIHGLLGRM 151
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
+ SDV+ N L+ Y C A ++FD M +R VS+N +I V++ + A F
Sbjct: 152 EIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELF 211
Query: 219 ----VKMKDL--------GFEPDETTMLV------------------VLSACTELGNLSL 248
++ K+L G+ E + V ++ C + G +
Sbjct: 212 DVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMEN 271
Query: 249 GKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ 308
+ Q+ +R V ++D YAK G + AR LF M E +V + +AM+ G Q
Sbjct: 272 AHHLFNQMPKRDVV----SWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQ 327
Query: 309 HGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGMVEDG 350
+G+ EAL F +M + P+ T L L A G ++G
Sbjct: 328 NGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEG 370
>gi|115448475|ref|NP_001048017.1| Os02g0730900 [Oryza sativa Japonica Group]
gi|46390470|dbj|BAD15931.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|46390866|dbj|BAD16370.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537548|dbj|BAF09931.1| Os02g0730900 [Oryza sativa Japonica Group]
gi|125541007|gb|EAY87402.1| hypothetical protein OsI_08809 [Oryza sativa Indica Group]
gi|125583571|gb|EAZ24502.1| hypothetical protein OsJ_08263 [Oryza sativa Japonica Group]
Length = 488
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 153/412 (37%), Positives = 217/412 (52%), Gaps = 41/412 (9%)
Query: 135 VLKACAEI--SGLNEGMQVQANVTKSGLD---SDVYTNNNLVRFYGSCRRKRDACKVFD- 188
L ACA + S E Q+ A + KSG S VY + +LVR Y R DA K+FD
Sbjct: 66 ALAACARLLPSAAAEAEQIHALLVKSGDPPSVSGVYASTSLVRVYARLGRLGDARKMFDG 125
Query: 189 ------------------------------DMCERSVVSWNVIITVCVENLWLGEAVGYF 218
+M ER+VVSWN +I V + W+ EAV F
Sbjct: 126 MPVKTVVSWNVLLDGIVRASDLDAAWEVFVEMPERNVVSWNTVIAGFVRHGWVQEAVDLF 185
Query: 219 VKMKDL-GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
+M + G PDE TM+ +SA ++G L +G+ H +I R L+ LG ALI+MY +
Sbjct: 186 AEMTVVYGLAPDEATMVGFVSAVRDMGVLGIGRCAHGYVIRREFSLDGALGVALINMYTR 245
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CG++G A FS + NV W+++I G A HG+ E AL LF+ M+ I PN VTFL V
Sbjct: 246 CGSMGDAFRCFSSVASKNVEQWTSVIGGFAAHGHPEMALRLFTEMRQLGIEPNGVTFLAV 305
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
L AC+H G+V +G++YF+ M + GIK HY + D+L RAG L+EA+ ++P P
Sbjct: 306 LNACSHGGLVNEGFKYFNLMRSM-GIKSTMQHYGCLIDLLGRAGFLEEAFELASSLPEDP 364
Query: 398 NPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSN 457
++ +LL+A H V R+L EPR + V+++N YA G WE +
Sbjct: 365 GLVIWSSLLAACQSHGNVEMAEVAA---RKLAHAEPRHGSSYVLLSNTYARAGQWEDLKR 421
Query: 458 VRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
RR M+ G+ K G+SW+EL G +H F S E IYQ+LE L +++
Sbjct: 422 TRRKMEEYGVMKQPGLSWIELDGRVHSFVSADKLHTESEDIYQMLEDLKVNL 473
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 115/296 (38%), Gaps = 45/296 (15%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMK-RRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ WN +I G+ +EAV +F +M G+ P E T + A ++ L G
Sbjct: 163 VSWNTVIAGFVRHGWVQEAVDLFAEMTVVYGLAPDEATMVGFVSAVRDMGVLGIGRCAHG 222
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
V + D L+ Y C DA + F + ++V W +I +
Sbjct: 223 YVIRREFSLDGALGVALINMYTRCGSMGDAFRCFSSVASKNVEQWTSVIGGFAAHGHPEM 282
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG-KWVHLQLIERGTVLNCQLGTALI 272
A+ F +M+ LG EP+ T L VL+AC+ G ++ G K+ +L + G Q LI
Sbjct: 283 ALRLFTEMRQLGIEPNGVTFLAVLNACSHGGLVNEGFKYFNL-MRSMGIKSTMQHYGCLI 341
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
D+ L + G+ EEA EL S++ P V
Sbjct: 342 DL-------------------------------LGRAGFLEEAFELASSLPE---DPGLV 367
Query: 333 TFLGVLCACNHAG---MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
+ +L AC G M E R E HG Y +++ ARAG ++
Sbjct: 368 IWSSLLAACQSHGNVEMAEVAARKLAHAEPRHGSS-----YVLLSNTYARAGQWED 418
>gi|413937828|gb|AFW72379.1| hypothetical protein ZEAMMB73_412000 [Zea mays]
Length = 471
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 151/436 (34%), Positives = 228/436 (52%), Gaps = 39/436 (8%)
Query: 111 REAVWVFIDMKRRG-IKPTEFTYPFVLKACAEI--------------SGL---------- 145
R+A+ +F+ M R G P +F YP VL+A + SG
Sbjct: 40 RDALALFLRMLRHGRPSPNQFVYPLVLRAACAVDVRIVRSIHSHACKSGFCGYEYDVIRT 99
Query: 146 -------NEGMQVQANVTKSGL-DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS 197
M A GL + V + LV Y + DA +F+ M ER V +
Sbjct: 100 SLLDCYSRHAMMADARKLFDGLTERSVVSWTALVSGYARAGKIGDAIMLFERMTERDVAA 159
Query: 198 WNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLI 257
WN IIT C +N EAVG F +M G P+ TT+ VLSAC LG L +GK +H
Sbjct: 160 WNAIITGCSQNRLFAEAVGIFGRMVGTGLRPNATTISCVLSACGHLGMLKIGKLIHCCAW 219
Query: 258 ERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALE 317
+ LIDMY KCG + A +F + + ++ W+++I LA HG+++ A+
Sbjct: 220 RTCVGFGSSVLNGLIDMYGKCGNLEGATWIFYEVSDRSLTAWNSLINCLALHGHSKCAIS 279
Query: 318 LFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL 377
+F+ M+ + P+ +TF+G+L AC H G V++G +YF M+H HGI+P HY + ++L
Sbjct: 280 VFNEMRGEGVEPDVITFVGLLNACTHGGFVDEGIKYFELMQHEHGIEPEIEHYGCIINLL 339
Query: 378 ARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
RAG ++A I NM + + ++ +LL+A +H + R+LLEL+P +
Sbjct: 340 GRAGRFQDALNVISNMRIESDEVIWGSLLNACRVH---RNVELAELAIRKLLELDPNNAN 396
Query: 438 NLVIVANKYAEVGMWEKVSNVRRFM--KNVGLKKMKGMSWVELGGSIHRFYSGYDSQVEL 495
+V++AN Y+E G+WE+V R+FM +N+G KK+ G SW+E+ IHRFYSG D+ E
Sbjct: 397 YVVMLANVYSEGGLWEEVRKARKFMEEENIG-KKLPGCSWIEVDRKIHRFYSGDDAHSES 455
Query: 496 AGIYQILETLNLHMKV 511
IY LE L M++
Sbjct: 456 ENIYDTLEDLAASMEL 471
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 3/242 (1%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN +I G + + EAV +F M G++P T VL AC + L G +
Sbjct: 160 WNAIITGCSQNRLFAEAVGIFGRMVGTGLRPNATTISCVLSACGHLGMLKIGKLIHCCAW 219
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
++ + N L+ YG C A +F ++ +RS+ +WN +I + A+
Sbjct: 220 RTCVGFGSSVLNGLIDMYGKCGNLEGATWIFYEVSDRSLTAWNSLINCLALHGHSKCAIS 279
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLG-KWVHLQLIERGTVLNCQLGTALIDMY 275
F +M+ G EPD T + +L+ACT G + G K+ L E G + +I++
Sbjct: 280 VFNEMRGEGVEPDVITFVGLLNACTHGGFVDEGIKYFELMQHEHGIEPEIEHYGCIINLL 339
Query: 276 AKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEA-LELFSNMKNSSISPNYVT 333
+ G A + S M E + W +++ H E A L + ++ + NYV
Sbjct: 340 GRAGRFQDALNVISNMRIESDEVIWGSLLNACRVHRNVELAELAIRKLLELDPNNANYVV 399
Query: 334 FL 335
L
Sbjct: 400 ML 401
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 8/162 (4%)
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
V+D WN+LI A + A+ VF +M+ G++P T+ +L AC ++EG
Sbjct: 253 VSDRSLTAWNSLINCLALHGHSKCAISVFNEMRGEGVEPDVITFVGLLNACTHGGFVDEG 312
Query: 149 MQ-VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVCV 206
++ + + G++ ++ ++ G R +DA V +M E V W ++ C
Sbjct: 313 IKYFELMQHEHGIEPEIEHYGCIINLLGRAGRFQDALNVISNMRIESDEVIWGSLLNACR 372
Query: 207 --ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNL 246
N+ L E K L +P+ +V+L+ G L
Sbjct: 373 VHRNVELAE----LAIRKLLELDPNNANYVVMLANVYSEGGL 410
>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 152/460 (33%), Positives = 232/460 (50%), Gaps = 16/460 (3%)
Query: 33 SFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILC 86
S + C S K L Q IH Q GL + + + L+ C S L Y ++
Sbjct: 106 SVISACASLKGLVQGKQIHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALEL 165
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
N P+ +N LI G+ + +P + V M + G P FT+ +L C L
Sbjct: 166 N------PVAYNALITGFVENQQPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLK 219
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G + K L+S + N ++ Y +A K F + E+ ++SWN I+ C
Sbjct: 220 RGELLHCQTIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCS 279
Query: 207 ENLWLGEAVGYFVKM-KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
+A+ F +M + PDE T L+AC+ L ++ GK +H LI +
Sbjct: 280 HCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDV 339
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
G ALI+MYAKCG + A +FS+ME N+ +W+ MI G HG+ +A ELF+ MK
Sbjct: 340 GAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTM 399
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
+ P+ VTF+G+L A NHAG+V++G YF+ ME +GI P H+ + D+L RAG L E
Sbjct: 400 GVKPDSVTFVGLLTASNHAGLVDEGLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNE 459
Query: 386 AYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANK 445
A ++ PF + +VL +LLSA +H G R+LL+L+P + V+++N
Sbjct: 460 AKEYMKKFPFGHDTVVLGSLLSACRLHG---DVDTGKCFARQLLKLQPATTSPYVLLSNL 516
Query: 446 YAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRF 485
YA MW+ V+ + +K GLKK G S +E+ G+ +F
Sbjct: 517 YASDEMWDGVAEAWKLLKGSGLKKEPGHSLIEVNGTFEKF 556
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 168/373 (45%), Gaps = 21/373 (5%)
Query: 33 SFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S + C K L Q +HA + ++D + ++ + + L AR + + +
Sbjct: 8 SLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNL--YAKCRKLREARQVF-DEM 64
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
++ + W+ +I GY P A+ +F + I P E+ Y V+ ACA + GL +G
Sbjct: 65 SERNLVSWSAMISGYEQIGEPISALGLF---SKLNIVPNEYVYASVISACASLKGLVQGK 121
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ K GLDS + +N L+ Y C + DA +++ E + V++N +IT VEN
Sbjct: 122 QIHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQ 181
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+ M GF PD T + +L C +L G+ +H Q I+ +G
Sbjct: 182 QPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGN 241
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS-SIS 328
+I MY+K + A F +EE ++ +W+ I + E+ALE F M N +
Sbjct: 242 LIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVR 301
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY-----HTMADILARAGHL 383
P+ TF L AC+ + +G + H H I+ R++ + + ++ A+ G +
Sbjct: 302 PDEFTFASALAACSGLASMCNGKQI-----HGHLIRT-RLYQDVGAGNALINMYAKCGCI 355
Query: 384 KEAYTFIMNMPFQ 396
+AY M Q
Sbjct: 356 AKAYYIFSKMEHQ 368
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 132/345 (38%), Positives = 195/345 (56%), Gaps = 3/345 (0%)
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
NN LV Y A VF+ M ++ V+SW ++T CV N EA+ F +M+ +G
Sbjct: 4 VNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG 63
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
PD+ + VLSAC EL L GK VH ++ G + + +L+ MYAKCG + A
Sbjct: 64 IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDAN 123
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F ME +V TW+A+I+G AQ+G E+L ++BM S + P+++TF+G+L AC+HAG
Sbjct: 124 KVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAG 183
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+VE G YF ME V+GIKP HY M D+L R+G L EA + M QP+ V +AL
Sbjct: 184 LVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKAL 243
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
L+A +H +G L ELEP+ + V+++N Y+ G WE+ + RR MK
Sbjct: 244 LAACRVHG---NVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLR 300
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
G+ K G SW+E+ +HRF S S A IY ++ + + +K
Sbjct: 301 GVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIK 345
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 136/304 (44%), Gaps = 47/304 (15%)
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
+ D I W +L+ G + EA+ +F +M+ GI P + VL ACAE++ L G
Sbjct: 28 MTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFG 87
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
QV AN KSGL S + +N+LV Y C DA KVFD M + V++W +I +N
Sbjct: 88 KQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQN 147
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
E++ ++ M G +PD T + +L AC+ H L+E G
Sbjct: 148 GRGRESLNFYNBMIASGVKPDFITFIGLLFACS-----------HAGLVEHG-------- 188
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEI-----NVWTWSAMILGLAQHGYAEEALELFSNMK 323
R F MEE+ ++ MI L + G EA EL + M
Sbjct: 189 ----------------RSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQM- 231
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR-IHYHTMADILARAGH 382
++ P+ + +L AC G VE G R ++ ++P + Y ++++ + AG
Sbjct: 232 --AVQPDATVWKALLAACRVHGNVELGER---AANNLFELEPKNAVPYVLLSNLYSAAGK 286
Query: 383 LKEA 386
+EA
Sbjct: 287 WEEA 290
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 146/388 (37%), Positives = 208/388 (53%), Gaps = 5/388 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +I GYA PREA+ +F D + + + P T VL ACA+ LN G V
Sbjct: 305 VSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCL 364
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K G D N LV Y C DA VF+ + ++ V++WN II+ +N + EA
Sbjct: 365 GIKLG-SEDATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEA 423
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQLGTALID 273
+ F +M+ PD T++ VLSAC +G +G +H I+ G + + +GTAL++
Sbjct: 424 LELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLN 483
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
YAKCG AR++F M E N TWSAMI G G +LELF +M + PN V
Sbjct: 484 FYAKCGDAESARVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVI 543
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
F +L AC+H+GM+ +G+RYF+ M V+ P HY M D+LARAG L+EA FI +
Sbjct: 544 FTTILSACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKI 603
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
P QP+ +L A L +H + +G RR+LEL P + V+++N YA G W
Sbjct: 604 PIQPDVSLLGAFLHGCRLHS---RFDLGEVAVRRMLELHPDKACYYVLMSNLYASEGRWS 660
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGS 481
+ + V MK GL K+ G S V++ S
Sbjct: 661 QANQVMELMKQRGLAKLPGWSLVDIETS 688
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 224/462 (48%), Gaps = 22/462 (4%)
Query: 31 CLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
C S L +C + L +IHA + V GL D +LV +L S ++ + +
Sbjct: 42 CFSLLGICKTVSSLRKIHALLVVHGLSEDLLCETKLV---SLYGSFGHVECARLMFDRIR 98
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTE-FTYPFVLKACAEISGLNEGM 149
+ W +IR Y +D E V + R+ + + + VLKAC+E+ +EG
Sbjct: 99 NPDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGR 158
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
++ + K G D + LV Y CR D+ +VFD++ +R+VV W +I V+N
Sbjct: 159 KLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQND 217
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
L E + F +M++ E ++ T+ +++ACT+LG L GKWVH +I+ G LN L T
Sbjct: 218 CLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVT 277
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
L+D+Y KCG + A +F + I++ +W+AMI+G AQ GY EAL+LF++ + + P
Sbjct: 278 PLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLP 337
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
N VT VL AC G + G R H + G + + + D+ A+ + +A +
Sbjct: 338 NTVTTSSVLSACAQTGSLNMG-RSVHCLGIKLGSEDATFE-NALVDMYAKCHMIGDA-RY 394
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG----SQNLVIVANK 445
+ F + I +++S + Q+G E ++ + LV V +
Sbjct: 395 VFETVFDKDVIAWNSIISGYT------QNGYAYEALELFDQMRSDSVYPDAITLVSVLSA 448
Query: 446 YAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYS 487
A VG + S++ + GL + G +V G ++ FY+
Sbjct: 449 CASVGAYRVGSSLHGYAIKAGL--LSGSVYV--GTALLNFYA 486
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 153/489 (31%), Positives = 239/489 (48%), Gaps = 39/489 (7%)
Query: 55 GLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAV 114
G+ + ++ R + +K L Y L +N + WN +I G+ S +AV
Sbjct: 139 GVVTSSALISRFARKGRVKETKELFYQTRDLGVELN---LVSWNGMISGFNRSGSYLDAV 195
Query: 115 WVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFY 174
+F +M G+KP + VL A ++ G+Q+ V K GL D + + L+ Y
Sbjct: 196 LMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMY 255
Query: 175 GSCRRKRDACKVFDDMCE---------------------------------RSVVSWNVI 201
G C + VF++M E +VVSW +
Sbjct: 256 GKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSM 315
Query: 202 ITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGT 261
I C +N EA+ F +M+ G +P+ T+ +L AC + L GK H + G
Sbjct: 316 IASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGI 375
Query: 262 VLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSN 321
+ +G+ALIDMYAKCG + +RL F M N+ +W++++ G A HG EA+ +F
Sbjct: 376 FNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFEL 435
Query: 322 MKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAG 381
M+ P++V+F VL AC G+ E+G+ YF M HG++ HY M +L R+G
Sbjct: 436 MQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSG 495
Query: 382 HLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVI 441
L+EAY I MPF+P+ V ALLS+ +H+ + +G +R+ ELEPR N ++
Sbjct: 496 RLEEAYAMIKQMPFEPDSCVWGALLSSCRVHN---RVDLGEIAAKRVFELEPRNPGNYIL 552
Query: 442 VANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQI 501
++N YA MW +V VR M++ GLKK G SW+E+ +H +G S ++ I +
Sbjct: 553 LSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEK 612
Query: 502 LETLNLHMK 510
L L + MK
Sbjct: 613 LAKLTVEMK 621
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 130/287 (45%), Gaps = 38/287 (13%)
Query: 114 VWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRF 173
+ VF M +GI P P V+K CA +S L G Q+ SGL D ++L+
Sbjct: 59 IRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHM 118
Query: 174 YGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE------ 227
Y +DA VFD + + VV+ + +I+ + E F + +DLG E
Sbjct: 119 YVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSW 178
Query: 228 -----------------------------PDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
PD T++ VL A +L +G +H +I+
Sbjct: 179 NGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIK 238
Query: 259 RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALEL 318
+G + + +ALIDMY KC +F+ M+E++V +A++ GL+++G + ALE+
Sbjct: 239 QGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEV 298
Query: 319 FSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKP 365
F K + N V++ ++ +C+ G + F EM+ + G+KP
Sbjct: 299 FKQFKGMDL--NVVSWTSMIASCSQNGKDMEALELFREMQ-IEGVKP 342
>gi|347954512|gb|AEP33756.1| chloroplast biogenesis 19, partial [Raphanus sativus]
Length = 476
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 146/438 (33%), Positives = 233/438 (53%), Gaps = 22/438 (5%)
Query: 87 NYVNDSVP---IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS 143
+++N S P + W + I + + R EA M+ G++P T +L C++
Sbjct: 24 HHLNQSTPETTVSWTSRITLLSRNGRLAEAAKELTAMRLAGVEPNHITLIALLSGCSDCE 83
Query: 144 GLNEGMQVQANVTKSGLDSD-VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII 202
L + + A K G D + V ++ Y RR R A VFD M + + V+WN +I
Sbjct: 84 PLGDSLHGYA--CKLGFDRNHVMVGTAILGMYSKRRRFRKARLVFDRMGDXNSVTWNTMI 141
Query: 203 TVCVENLWLG--------------EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSL 248
+L EA+ +F +M+ G EPD ++ L+ACT LG LS
Sbjct: 142 DGYXRDLISXTXMINGFVKKGLNEEALAWFREMQVSGVEPDYVAIIAALAACTNLGALSF 201
Query: 249 GKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ 308
G WVH ++ + N ++ +LID+Y +CG V AR +F +ME+ V +W+++I+G A
Sbjct: 202 GLWVHRYVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAA 261
Query: 309 HGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRI 368
+G+A E+L F M+ P+ VTF G L AC+H G+VE+G RYF M+ + I P
Sbjct: 262 NGHAHESLVYFRKMQEERFKPDAVTFTGALTACSHVGLVEEGVRYFEAMKRDYRISPRIE 321
Query: 369 HYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRL 428
HY + D+ +RAG L++A + +MP +PN +V+ +LL+A H + + + + L
Sbjct: 322 HYGCLVDLYSRAGRLEDALKVVESMPMKPNEVVIGSLLAACRTHGNDTE--LAERMMKHL 379
Query: 429 LELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
EL+ + N VI++N YA G WE S +RR MK +GLKK G S +E+ H F +G
Sbjct: 380 SELKVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDRTHVFMAG 439
Query: 489 YDSQVELAGIYQILETLN 506
+ VE A I +++E ++
Sbjct: 440 DSAHVETAYIREVVELIS 457
>gi|147841473|emb|CAN62101.1| hypothetical protein VITISV_033310 [Vitis vinifera]
Length = 396
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 214/383 (55%), Gaps = 5/383 (1%)
Query: 126 KPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACK 185
+P E T VL CA++ L G++++ L S++ + ++ Y C D
Sbjct: 3 EPBEITLATVLSICAKLGDLEMGLRIKKLXDNKNLGSNMIVSTAMLEMYVKCGAVDDGRL 62
Query: 186 VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGN 245
VFD M R VV W+ +I +N EA+ F MK +P++ T++ VLSAC +LG+
Sbjct: 63 VFDHMARRDVVXWSAMIAGYAQNGRSNEALELFEXMKSAQIKPNDVTLVSVLSACAQLGS 122
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
+ G+ + + RG + N + +AL+ MY+KCG + AR +F ++ + + TW++MI+G
Sbjct: 123 VETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMG 182
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKP 365
LA +G+AE+A+ L++ MK + PN +TF+G+L AC HAG VE G +F M H I P
Sbjct: 183 LAINGFAEDAIALYNRMKEIEVKPNNITFVGLLTACTHAGHVELGLEFFRSMRSDHNISP 242
Query: 366 MRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH-DAKYQDGVGNEV 424
H+ + D+ R+G L +AY FI M +PN ++ LLSAS IH + + + G
Sbjct: 243 NIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAG--- 299
Query: 425 RRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHR 484
++LLELEP S N VI++N YA W++ VR+ MK+ ++K SWVE+ +H+
Sbjct: 300 -KKLLELEPDNSGNYVILSNIYASASRWQEALKVRKLMKDKRVQKAAAYSWVEVEDRVHK 358
Query: 485 FYSGYDSQVELAGIYQILETLNL 507
F G S +Y ++ L L
Sbjct: 359 FLVGDTSHPRSDEVYSTIDGLAL 381
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 110/211 (52%), Gaps = 2/211 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W+ +I GYA + R EA+ +F MK IKP + T VL ACA++ + G ++ +
Sbjct: 73 VXWSAMIAGYAQNGRSNEALELFEXMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSY 132
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V GL S+VY + L+ Y C A ++FD + +R V+WN +I N + +A
Sbjct: 133 VESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDA 192
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG-KWVHLQLIERGTVLNCQLGTALID 273
+ + +MK++ +P+ T + +L+ACT G++ LG ++ + N + ++D
Sbjct: 193 IALYNRMKEIEVKPNNITFVGLLTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVD 252
Query: 274 MYAKCGAVGCARLLFSRME-EINVWTWSAMI 303
++ + G + A RME E NV W ++
Sbjct: 253 LFCRSGRLIDAYEFICRMEVEPNVVIWGTLL 283
>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 136/420 (32%), Positives = 229/420 (54%), Gaps = 4/420 (0%)
Query: 75 SKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPF 134
++++ AR++ SV WN L+ GY + ++ V +F M+ + ++P T
Sbjct: 363 ARDVLSARAMFDKISRPSVTT-WNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAV 421
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
+L +C+ + L+ G QV + + L +D++ + LV Y C + A +F+ M ER
Sbjct: 422 ILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERD 481
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHL 254
VV WN +I+ + EA +F +M+ G P E++ ++++C L ++ G+ +H
Sbjct: 482 VVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHA 541
Query: 255 QLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEE 314
Q+++ G N +G+ALIDMYAKCG + AR+ F M N+ W+ MI G AQ+G+ E+
Sbjct: 542 QIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEK 601
Query: 315 ALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMA 374
A++LF M + P+ VTF+ VL C+H+G+V++ +F+ ME +GI P+ HY +
Sbjct: 602 AVDLFEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTYGITPLAEHYTCLI 661
Query: 375 DILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPR 434
D L RAG L E I NMP + +PIV LL+A ++H + +G + L L+P+
Sbjct: 662 DGLGRAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVH---HNAELGECAAKHLFRLDPK 718
Query: 435 GSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVE 494
V+++N YA +G S VR M + G+ K +G SW++ +H F D Q +
Sbjct: 719 NPSPYVLLSNIYASLGRHGDASGVRALMSSRGVVKGRGYSWIDHKDGVHAFMVADDLQTD 778
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 149/307 (48%), Gaps = 17/307 (5%)
Query: 52 QVSGLQNDA-QILKELVRFCTLSSSKNLTYARSI--------LCNYVNDSVPIPWNNLIR 102
VSGL DA + + L R S + L+ AR L + + D + WN +I
Sbjct: 54 SVSGLPCDALRAFRSLPRPNAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIA 113
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
A S+R EA+ ++ M R G+ PT FT VL AC ++ L++G + K GLD
Sbjct: 114 ALARSERAGEALELYEGMLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDE 173
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
+++ N L+ Y C DA ++FD M + VS+ ++ V+ + +A+ F +M
Sbjct: 174 NLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMC 233
Query: 223 DLGFEPDETTMLVVLSACTE--------LGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
G D + VL +C + + LG+ +H ++ +G + +G +LIDM
Sbjct: 234 RSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDM 293
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y KC + A +F + I+ +W+ +I G Q G +ALE+ + M+ S PN VT+
Sbjct: 294 YTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTY 353
Query: 335 LGVLCAC 341
+L +C
Sbjct: 354 SNMLASC 360
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 167/379 (44%), Gaps = 49/379 (12%)
Query: 16 KPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSS 75
P +S L S A+ C S + + + IHA I G +D + L+ T
Sbjct: 240 DPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYT---- 295
Query: 76 KNLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFT 131
K + ++ V DS+P + WN LI G+ + +A+ V M+ G +P E T
Sbjct: 296 KCMQMDEAV---KVFDSLPNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVT 352
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
Y +L +C + R A +FD +
Sbjct: 353 YSNMLASCIK-----------------------------------ARDVLSARAMFDKIS 377
Query: 192 ERSVVSWNVIIT-VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
SV +WN +++ C E L + V F +M+ +PD TT+ V+LS+C+ LG L LG
Sbjct: 378 RPSVTTWNTLLSGYCQEELHQ-DTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGT 436
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
VH + + + + L+DMY+KCG +G AR++F+RM E +V W++MI GLA H
Sbjct: 437 QVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHS 496
Query: 311 YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY 370
EEA + F M+ + + P ++ ++ +C V G R H G
Sbjct: 497 LNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQG-RQIHAQIVKDGYDQNVYVG 555
Query: 371 HTMADILARAGHLKEAYTF 389
+ D+ A+ G++ +A F
Sbjct: 556 SALIDMYAKCGNMDDARVF 574
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 7/220 (3%)
Query: 29 RQCLSFLKLCCSKKHLYQIHAQIQVSG----LQNDAQILKELVRFCTLSSSKNLTYARSI 84
R L+ + CS+ + + Q+ + L ND + LV S + AR I
Sbjct: 416 RTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDM--YSKCGQIGIAR-I 472
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
+ N + + + WN++I G A EA F M+ G+ PTE +Y ++ +CA +S
Sbjct: 473 IFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSS 532
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
+ +G Q+ A + K G D +VY + L+ Y C DA FD M +++V+WN +I
Sbjct: 533 VPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHG 592
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELG 244
+N + +AV F M PD T + VL+ C+ G
Sbjct: 593 YAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLTGCSHSG 632
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 94/192 (48%), Gaps = 4/192 (2%)
Query: 176 SCRRKRD---ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETT 232
+ RR D A + D+M +R+VVSWN +I + GEA+ + M G P T
Sbjct: 83 AARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFT 142
Query: 233 MLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME 292
+ VLSAC + L G+ H ++ G N + AL+ MY KCG V A LF M
Sbjct: 143 LASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMA 202
Query: 293 EINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVE-DGY 351
N +++AM+ GL Q G ++AL LF+ M S + + V VL +C A E D
Sbjct: 203 SPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVV 262
Query: 352 RYFHEMEHVHGI 363
R F + +H +
Sbjct: 263 RAFRLGQCIHAL 274
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
+ G + AR L M + NV +W+ +I LA+ A EALEL+ M + P + T
Sbjct: 86 RAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLAS 145
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
VL AC ++DG R H + G+ + + + + G +++A M
Sbjct: 146 VLSACGAVAALDDG-RRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMA-S 203
Query: 397 PNPIVLRA----LLSASSIHDA 414
PN + A L+ A S+ DA
Sbjct: 204 PNEVSFTAMMGGLVQAGSVDDA 225
>gi|225450995|ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240 [Vitis vinifera]
Length = 565
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 153/403 (37%), Positives = 224/403 (55%), Gaps = 17/403 (4%)
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D +P + W +LI G +D P EAV V+ DM+ + P E T VL ACA
Sbjct: 162 VFDDIPKWNVVAWTSLIAGCISNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRD 221
Query: 145 LNEGMQVQANVTKSGLDS-------DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS 197
LN G V + GLD +V +V Y C + A +F+ M R++V+
Sbjct: 222 LNAGRWVHDRTGQMGLDPFQSNSNFNVILATAIVDMYAKCGSLKTARDLFNKMPHRNLVA 281
Query: 198 WNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLI 257
WN +I + EA+ F M+ GF+PD+ T L V+ AC LG L G+ +H +
Sbjct: 282 WNSMIGAYNQYGQANEALDLFSDMRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYVS 341
Query: 258 ERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALE 317
+ + +GTAL+DMYAK G A+ +FS +++ +V W+++I+GLA HG+ EEAL
Sbjct: 342 KTNLTDDTAIGTALVDMYAKSGDAERAQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALT 401
Query: 318 LFSNMK-NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
F M+ ++++ P+ +T++GVL AC+H G VEDG +F M++VHGI+P HY M D+
Sbjct: 402 FFKKMQEDTALIPDEITYIGVLSACSHVGKVEDGKNHFISMKNVHGIEPTTQHYGCMVDL 461
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD-GVGNEVRRRLLELEPRG 435
L+RAG L EA + MP +PN + ALL+ I YQ+ V + VRRR+ ELE G
Sbjct: 462 LSRAGRLGEAERLVEKMPVEPNTAIWSALLNGCKI----YQNIDVADRVRRRVRELEVDG 517
Query: 436 SQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVEL 478
S V+++N YA WE+V R MK ++K G S VE+
Sbjct: 518 SGVYVLLSNIYAGACRWEEVKMARELMKERKIQKSLGHSSVEM 560
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 145/429 (33%), Positives = 219/429 (51%), Gaps = 43/429 (10%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LS L+ C + L ++H + + + D L LV FC S S NL YA+S+ N ++
Sbjct: 9 LSLLEKCKTMAELKRLHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSVF-NQIDR 67
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
WN++I+GY+ S+ P EA+ ++ +M+++G P FT+PFVLKAC+ ++G N G V
Sbjct: 68 PSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQCV 127
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
+ K+G + DVY L++ Y +C A KVFDD+ + +VV+W +I C+ N
Sbjct: 128 HNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCISNDCP 187
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH-------LQLIERGTVLN 264
EAV + M+ P+E TM+ VL AC +L+ G+WVH L + + N
Sbjct: 188 SEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQSNSNFN 247
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
L TA++DMYAKCG++ AR LF++M N+ W++MI Q+G A EAL+LFS+M+
Sbjct: 248 VILATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEALDLFSDMRI 307
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDG-------------------------YRYFHEMEH 359
+ P+ TFL V+ AC H G + G Y + E
Sbjct: 308 AGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSGDAER 367
Query: 360 VHGI-----KPMRIHYHTMADILARAGHLKEAYTFIMNM----PFQPNPIVLRALLSASS 410
+ K + ++ LA GH +EA TF M P+ I +LSA S
Sbjct: 368 AQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGVLSACS 427
Query: 411 IHDAKYQDG 419
H K +DG
Sbjct: 428 -HVGKVEDG 435
>gi|326507168|dbj|BAJ95661.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 153/468 (32%), Positives = 242/468 (51%), Gaps = 18/468 (3%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP------IPWNN 99
Q+HA GL +D +L L+ SS + ARS+L DS P + WN
Sbjct: 114 QLHALSVKLGLSSDTFVLNTLINM--YSSCSYPSTARSVL-----DSAPKGASDTVSWNT 166
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
+I GY + P +A+ F M + + + T L ACA + G A + +G
Sbjct: 167 IIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNG 226
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
+ + Y ++L+ Y C + DA ++FD M +R+ V W +I+ + EA+ F
Sbjct: 227 FEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFR 286
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
M+ G + D+ T+ V+S+C ++G L LG++VH G + + +LIDMY+KCG
Sbjct: 287 DMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCG 346
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN-SSISPNYVTFLGVL 338
+ A +F M + + ++W+ +I+G A +G + EAL+LF+ M+ + PN +TFLGVL
Sbjct: 347 DIKKAYDIFCGMVKRDNFSWT-VIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVL 405
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
+C+H G+VE GYR+FH M ++GI P HY M D+L RA L EA FI MP P+
Sbjct: 406 TSCSHGGLVEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPD 465
Query: 399 PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
++ R+LL A + G+ V R+ LEP V+++ YA W + V
Sbjct: 466 AVMWRSLLFACRTCG---EVGLAEYVAERIQVLEPNKCGGDVLLSTVYATTSRWVDANKV 522
Query: 459 RRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
R + + K G S++E+ G +H F++G +S E IY L +N
Sbjct: 523 RTGIYSGRKTKQPGCSFIEVDGCVHEFFAGDESHFETEAIYSTLLGIN 570
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 151/309 (48%), Gaps = 5/309 (1%)
Query: 93 VPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTE-FTYPFVLKACAEISGLNEGMQV 151
VP+ ++++R + P ++ ++R G P + ++ L A + + G Q+
Sbjct: 57 VPL-LHSVLRSLSSGPVPSLSLSFLSLLRRSGYMPIDNYSLSAALSTAARMPSVVVGAQL 115
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS--VVSWNVIITVCVENL 209
A K GL SD + N L+ Y SC A V D + + VSWN II +
Sbjct: 116 HALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVLDSAPKGASDTVSWNTIIAGYIHAG 175
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+A+ F +M D+ T+L L AC + +GK H L+ G +NC +G+
Sbjct: 176 LPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEINCYMGS 235
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
+LI MYAKCG V AR +F M + N W++MI G Q G ++EA++LF +M+ + +
Sbjct: 236 SLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQIAGVKV 295
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
+ T V+ +C G ++ G RY H +HG+ +++ D+ ++ G +K+AY
Sbjct: 296 DDATISTVVSSCGQMGALDLG-RYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYDI 354
Query: 390 IMNMPFQPN 398
M + N
Sbjct: 355 FCGMVKRDN 363
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 140/467 (29%), Positives = 245/467 (52%), Gaps = 6/467 (1%)
Query: 48 HAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWS 107
H +I L+ D +L L+ S + AR + + S+ + WN +I Y +
Sbjct: 84 HGKIIRIDLEGDVTLLNVLIN--AYSKCGFVELARQVFDGMLERSL-VSWNTMIGLYTRN 140
Query: 108 DRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTN 167
EA+ +F++M+ G K +EFT VL AC E ++ K+ +D ++Y
Sbjct: 141 RMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVG 200
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
L+ Y C +DA +VF+ M ++S V+W+ ++ V+N EA+ + + + + E
Sbjct: 201 TALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE 260
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
++ T+ V+ AC+ L L GK +H + + G N + ++ +DMYAKCG++ + ++
Sbjct: 261 QNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYII 320
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMV 347
FS ++E N+ W+ +I G A+H +E + LF M+ + PN VTF +L C H G+V
Sbjct: 321 FSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 380
Query: 348 EDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLS 407
E+G R+F M +G+ P +HY M DIL RAG L EAY I ++PF P + +LL+
Sbjct: 381 EEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 440
Query: 408 ASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGL 467
+ ++ V E +L ELEP + N V+++N YA WE+++ R+ +++ +
Sbjct: 441 SCRVYKNLELAEVAAE---KLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDV 497
Query: 468 KKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
KK++G SW+++ +H F G + I L+ L + + +
Sbjct: 498 KKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGY 544
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 130/253 (51%), Gaps = 1/253 (0%)
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
+L+ CA + E + + L+ DV N L+ Y C A +VFD M ERS
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHL 254
+VSWN +I + N EA+ F++M++ GF+ E T+ VLSAC + K +H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 255 QLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEE 314
++ LN +GTAL+D+YAKCG + A +F M++ + TWS+M+ G Q+ EE
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 315 ALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMA 374
AL L+ + S+ N T V+CAC++ + +G + H + G +
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEG-KQMHAVICKSGFGSNVFVASSAV 305
Query: 375 DILARAGHLKEAY 387
D+ A+ G L+E+Y
Sbjct: 306 DMYAKCGSLRESY 318
>gi|46805412|dbj|BAD16914.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215704291|dbj|BAG93131.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 527
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 151/414 (36%), Positives = 213/414 (51%), Gaps = 39/414 (9%)
Query: 127 PTEFTYPFVLKACAEIS----GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRD 182
P + T VL ACA+ + V A V K S + + LVRFY + R
Sbjct: 99 PNDVTLLTVLSACADSPSSPLARRLALSVHARVLKL-FPSHLLLSTCLVRFYFASRLPHL 157
Query: 183 ACKVFDDMCERSVV-------------------------------SWNVIITVCVENLWL 211
A ++FD M RS V SW +I CV+N
Sbjct: 158 ALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRH 217
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
EA+ F M G EPD T++ V+SAC E+G L LG WVH ++ +G N ++ +L
Sbjct: 218 DEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANSL 277
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
IDMYA+CG V AR +FS M + V +W++MI+G A +G +A+E F M+ P+
Sbjct: 278 IDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDA 337
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
VTF GVL AC+H G+ ++G RY+ M +GI HY + D+L R+G L+EA +
Sbjct: 338 VTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEAMRVVT 397
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGM 451
MP +PN +VL ALL+ +H G+ ++ + LLEL+P G N V+++N YA VG
Sbjct: 398 TMPMRPNEVVLGALLAGCRMHG---DVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGK 454
Query: 452 WEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
W+ VR MK GL+K G S VE+ G +H F SG S + I Q+L L
Sbjct: 455 WDGAGKVRSLMKARGLRKRPGYSAVEIDGDVHEFVSGDRSHPQAEEISQMLGLL 508
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 112/240 (46%), Gaps = 6/240 (2%)
Query: 89 VNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D +P P W LI G + R EA+ F M G++P T V+ ACAE+
Sbjct: 192 VFDGMPAPDKVSWTALIDGCVKNGRHDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGA 251
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L GM V V + GL+ +V N+L+ Y C + A +VF M +R+VVSWN +I
Sbjct: 252 LGLGMWVHRLVVRQGLERNVRIANSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVG 311
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG-KWVHLQLIERGTVL 263
N +AV +F M+ GF+PD T VL+AC+ G G ++ L E G
Sbjct: 312 FAANGRCADAVEHFEAMRREGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAA 371
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEALELFSNM 322
+ ++D+ + G + A + + M N A++ G HG A +L ++
Sbjct: 372 RMEHYGCVVDLLGRSGQLEEAMRVVTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHL 431
>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
Length = 648
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 156/486 (32%), Positives = 234/486 (48%), Gaps = 15/486 (3%)
Query: 35 LKLCC---SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LK CC IH +G Q + LV S + AR +
Sbjct: 66 LKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLV--LVYSKGGRIGDARRVFDGAGLG 123
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRR--GIKPTEFTYPFVLKACAEISGLNEGM 149
S WN ++ GYA + R+A+ VF +M+R +P EFT+ +LKAC+ + EG
Sbjct: 124 SGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGA 183
Query: 150 QVQANVTKSGLD--SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
QV A +T SG S+ LV Y CRR A +VF+ + ++V+ W ++ +
Sbjct: 184 QVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQ 243
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
+ EA+ F + G PD + V+ + + G+ VH I+ T +
Sbjct: 244 EGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSA 303
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
G +++DMY KCG A +F M NV +W+ M+ GL +HG EA+ LF M+ +
Sbjct: 304 GNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGV 363
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
P+ VT+L +L AC+HAG+V++ RYF + ++P HY M D+L RAG L+EA
Sbjct: 364 EPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREAR 423
Query: 388 TFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYA 447
I MP +P V + LLSA +H VG E LL ++ N V ++N A
Sbjct: 424 DLIRTMPMEPTVGVWQTLLSACRVHK---DVAVGREAGDVLLAMDGDNPVNYVTLSNVLA 480
Query: 448 EVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG---YDSQVELAGIYQILET 504
E G W + VR M+ GLKK G SWVE+G +H FY G ++ + I ++L
Sbjct: 481 EAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRD 540
Query: 505 LNLHMK 510
+ M+
Sbjct: 541 METRMR 546
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 131/315 (41%), Gaps = 12/315 (3%)
Query: 33 SFLKLCC---SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S LK C + + Q+HA + SG + + + L A +
Sbjct: 168 SLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLE 227
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+V I W ++ G+A + EA+ +F R G +P V+ A+ + + +G
Sbjct: 228 RKNV-IQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGR 286
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
QV K +DV N++V Y C +A ++F +M +VVSW ++ ++
Sbjct: 287 QVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHG 346
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL--NCQL 267
EAV F +M+ G EPDE T L +LSAC+ G + + + I R + +
Sbjct: 347 LGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECR-RYFSCIRRDRTVRPKAEH 405
Query: 268 GTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQH---GYAEEALELFSNMK 323
++D+ + G + AR L M E V W ++ H EA ++ M
Sbjct: 406 YACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMD 465
Query: 324 NSSISPNYVTFLGVL 338
+ NYVT VL
Sbjct: 466 GDN-PVNYVTLSNVL 479
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 10/182 (5%)
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL----GFEPDETTMLVVLS 238
AC+VF M +R+VVSW ++ V L G+A G + ++ P+E T+ L
Sbjct: 11 ACEVFGGMRDRNVVSWTALM---VGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLK 67
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME-EINVW 297
AC +G+ + G +H + G + + ++L+ +Y+K G +G AR +F +
Sbjct: 68 ACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIA 127
Query: 298 TWSAMILGLAQHGYAEEALELFSNMK--NSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
TW+AM+ G A G+ +AL +F M+ P+ TF +L AC+ G +G +
Sbjct: 128 TWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHA 187
Query: 356 EM 357
M
Sbjct: 188 AM 189
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 65/178 (36%), Gaps = 45/178 (25%)
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS-ISPNYV 332
MY KCG + A +F M + NV +W+A+++G +HG A L L M+ +S +PN
Sbjct: 1 MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 60
Query: 333 TFLGVLCAC-----------------------------------NHAGMVEDGYRYFHEM 357
T L AC + G + D R F
Sbjct: 61 TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA 120
Query: 358 EHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM-----PFQPNPIVLRALLSASS 410
GI ++ M A AGH ++A M QP+ +LL A S
Sbjct: 121 GLGSGIAT----WNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACS 174
>gi|147797709|emb|CAN61058.1| hypothetical protein VITISV_011618 [Vitis vinifera]
Length = 529
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 152/438 (34%), Positives = 229/438 (52%), Gaps = 16/438 (3%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPWNNLI 101
QIH QI G + + I L+ L + + D +P + WN LI
Sbjct: 100 QIHGQIFKLGFEFEVIIQTALLSMYGL-------FDEDCGLQQIFDEMPQRDLVMWNALI 152
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
YA + P + V DM +KP T +L C+ + L EG V VTK+ ++
Sbjct: 153 AAYAHGNCPYKVREVSYDMVSSNVKPNGVTAVSILSVCSSLRALREGKAVHGYVTKNLIE 212
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
DV+ +N L+ Y C RDA +VF M R+VVSW +I +N EA+G+F +M
Sbjct: 213 XDVFVHNALIDVYSKCGSIRDAVQVFQLMPMRNVVSWTSLINGYSDNNCPNEALGFFKQM 272
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC-QLGTALIDMYAKCGA 280
+ PDE T+L V+ C++L + LG+W+ +++ G V + L+DM+AKCG
Sbjct: 273 EAENIRPDEITVLGVVCMCSKLRSFELGEWISQYVVKTGLVKESPAIANVLMDMHAKCGN 332
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
+ A +F MEE + +W+ MI GLA +G+ AL F M+ P+ + FL +L A
Sbjct: 333 IKRACQIFDGMEEKTIVSWTIMIQGLAMYGHGLSALVRFCQMQREGFKPDSLVFLSLLSA 392
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPI 400
C+HAG+V++G+R F ME + I P HY M DIL RAG + EA+ F+ NMP +P+ I
Sbjct: 393 CSHAGLVDEGWRCFSSMEADYHIXPWMEHYGCMVDILCRAGLVDEAFKFVQNMPIKPDMI 452
Query: 401 VLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRR 460
V R LL A + N+V L EL P+ S++ V+++N +A W+ V VR+
Sbjct: 453 VWRTLLGACXXQG---NISLANQVMNXLCELGPKKSEDYVLLSNLFASNAEWDNVXEVRK 509
Query: 461 FMKNVGLKKMK-GMSWVE 477
M + G+ K G S++E
Sbjct: 510 EMGDRGVTKQDPGCSFIE 527
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 158/331 (47%), Gaps = 1/331 (0%)
Query: 56 LQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVW 115
L N K +V F +++ + AR I + ++ WN +IRGY + P EA+
Sbjct: 7 LHNPTLASKLVVSFASITLPGTTSVARRI-ADQIDGLDTYTWNTIIRGYLEGNDPEEAIL 65
Query: 116 VFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYG 175
++ ++++G+K +T FV+KAC + EG Q+ + K G + +V L+ YG
Sbjct: 66 IYNHVRKKGLKVDTYTLVFVIKACGLRPVILEGEQIHGQIFKLGFEFEVIIQTALLSMYG 125
Query: 176 SCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLV 235
++FD+M +R +V WN +I + M +P+ T +
Sbjct: 126 LFDEDCGLQQIFDEMPQRDLVMWNALIAAYAHGNCPYKVREVSYDMVSSNVKPNGVTAVS 185
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
+LS C+ L L GK VH + + + + ALID+Y+KCG++ A +F M N
Sbjct: 186 ILSVCSSLRALREGKAVHGYVTKNLIEXDVFVHNALIDVYSKCGSIRDAVQVFQLMPMRN 245
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
V +W+++I G + + EAL F M+ +I P+ +T LGV+C C+ E G
Sbjct: 246 VVSWTSLINGYSDNNCPNEALGFFKQMEAENIRPDEITVLGVVCMCSKLRSFELGEWISQ 305
Query: 356 EMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+ +K + + D+ A+ G++K A
Sbjct: 306 YVVKTGLVKESPAIANVLMDMHAKCGNIKRA 336
>gi|302809659|ref|XP_002986522.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
gi|300145705|gb|EFJ12379.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
Length = 625
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 136/420 (32%), Positives = 224/420 (53%), Gaps = 9/420 (2%)
Query: 32 LSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
L+ L CC+ + L++ IH G+ D ++ E F S + + AR +
Sbjct: 210 LTILSACCALEDLHEGIRIHEHASACGMDKD--LVVETAVFNMYSKCRQVDLARKMFDGM 267
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
+ + WN++I YA S R REA+ ++ MK G++P + TY L AC G +G
Sbjct: 268 NEKTNVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGACTSYGGSAKG 327
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
++ + +T+S + +DV+ + +V Y C A F+ M ++ V+W+ ++ ++
Sbjct: 328 AEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQQ 387
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ-L 267
+ EA+ +++M GF+P E T+ L+AC+ +G L GK +H ++ T+ NC L
Sbjct: 388 GYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQATETLQNCLFL 447
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
+L++MYAKCG + A +FS ++ + ++W+ +I+G A HG +E L L M +
Sbjct: 448 QNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGV 507
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
P+YVTF VL AC+HAG+++ G +F M + IKPM HY + D+L+RAG +EA
Sbjct: 508 DPDYVTFACVLLACSHAGLLDRGRSHFLSMTGDYCIKPMLDHYECLVDVLSRAGWAREAE 567
Query: 388 TFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYA 447
M MPF P P+ LL A +H + G E R LLEL S + V+++N A
Sbjct: 568 ALAMAMPFTPRPVTWTTLLGACKLHGETKR---GVEAARSLLELGFECSSSYVLLSNLVA 624
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 173/372 (46%), Gaps = 9/372 (2%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW 97
C ++ L I A I S ++ + LV T S +L AR + + N + I W
Sbjct: 20 CSGREELDTIQASIAASDFHSNVVVKNSLVSAYT--RSGDLRSARKVFDSIENKDL-ISW 76
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N+++ Y+ E + +F ++ ++P TY +L AC+ + L G +V A V++
Sbjct: 77 NSMVVAYSQHGHGEEMLELF---RKMDVEPDSITYASILGACSAMELLELGKEVHARVSR 133
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
S SD L+ Y C A +VFD + WN +I+ V++ EA+G
Sbjct: 134 SRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMISGLVQHGRAREALGL 193
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
F +MK D+ + L +LSAC L +L G +H G + + TA+ +MY+K
Sbjct: 194 FERMKAESVRIDKVSYLTILSACCALEDLHEGIRIHEHASACGMDKDLVVETAVFNMYSK 253
Query: 278 CGAVGCARLLFSRM-EEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
C V AR +F M E+ NV +W++MI AQ G EALEL+ MK + P+ +T+ G
Sbjct: 254 CRQVDLARKMFDGMNEKTNVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAG 313
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
L AC G G H I+ + ++ A+ G L+ A ++ M +
Sbjct: 314 ALGACTSYGGSAKGAE-IHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMR-R 371
Query: 397 PNPIVLRALLSA 408
N + A++ A
Sbjct: 372 KNAVTWSAMVGA 383
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 181/410 (44%), Gaps = 53/410 (12%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M G +P T+ V +C SG E +QA++ S S+V N+LV Y
Sbjct: 1 MLLEGFRPNGVTFSGVASSC---SGREELDTIQASIAASDFHSNVVVKNSLVSAYTRSGD 57
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
R A KVFD + + ++SWN ++ ++ E + F KM EPD T +L A
Sbjct: 58 LRSARKVFDSIENKDLISWNSMVVAYSQHGHGEEMLELFRKMD---VEPDSITYASILGA 114
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C+ + L LGK VH ++ + L ALI+MY+KCG + AR +F ++ ++ W
Sbjct: 115 CSAMELLELGKEVHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPW 174
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+AMI GL QHG A EAL LF MK S+ + V++L +L AC + +G R HE
Sbjct: 175 NAMISGLVQHGRAREALGLFERMKAESVRIDKVSYLTILSACCALEDLHEGIR-IHEHAS 233
Query: 360 VHGI--------------------------------KPMRIHYHTMADILARAGHLKEA- 386
G+ K + +++M A++G +EA
Sbjct: 234 ACGMDKDLVVETAVFNMYSKCRQVDLARKMFDGMNEKTNVVSWNSMIAAYAQSGRGREAL 293
Query: 387 --YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNL-VIVA 443
Y + QP+ I L A + + + G E+ R+ E + R L +
Sbjct: 294 ELYELMKEEGVQPDDITYAGALGACTSYGGSAK---GAEIHSRITESKIRTDVFLDTAIV 350
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQV 493
N YA+ G E + + F K +++ ++W + G+ GYD +
Sbjct: 351 NMYAKCGELE--TAMSYFEK---MRRKNAVTWSAMVGAF--IQQGYDREA 393
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 162/505 (32%), Positives = 256/505 (50%), Gaps = 23/505 (4%)
Query: 13 FPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDA----QILKELVR 68
F KP N + KA C L +K +HA + V GL+ D IL +
Sbjct: 118 FGQKPDNFTYPFVLKA--CGDLLLREMGRK----VHALVVVGGLEEDVYVGNSILSMYFK 171
Query: 69 FCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPT 128
F + +++ + + R ++ + + WN ++ G+ + R A VF DM+R G
Sbjct: 172 FGDVEAAR-VVFDRMLVRDLTS------WNTMMSGFVKNGEARGAFEVFGDMRRDGFVGD 224
Query: 129 EFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDV---YTNNNLVRFYGSCRRKRDACK 185
T +L AC ++ L G ++ V ++G V + N+++ Y +C A K
Sbjct: 225 RTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARK 284
Query: 186 VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGN 245
+F+ + + VVSWN +I+ + +A+ F +M +G PDE T++ VL+AC ++
Sbjct: 285 LFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISA 344
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
L LG V +++RG V+N +GTALI MYA CG++ CA +F M E N+ + M+ G
Sbjct: 345 LRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTG 404
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKP 365
HG EA+ +F M ++P+ F VL AC+H+G+V++G F++M + ++P
Sbjct: 405 FGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEP 464
Query: 366 MRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVR 425
HY + D+L RAG+L EAY I NM +PN V ALLSA +H + +
Sbjct: 465 RPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQ-- 522
Query: 426 RRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRF 485
+L EL P G V ++N YA WE V NVR + L+K S+VEL +H+F
Sbjct: 523 -KLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQF 581
Query: 486 YSGYDSQVELAGIYQILETLNLHMK 510
+ G S + IY L+ LN +K
Sbjct: 582 FVGDTSHEQSDDIYAKLKDLNEQLK 606
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/344 (35%), Positives = 180/344 (52%), Gaps = 17/344 (4%)
Query: 9 TNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKE 65
T PKPS+ ++ + QC + L+ + K L Q+HA + G L
Sbjct: 6 TTATLIPKPSSTST---FDSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLAT 62
Query: 66 LVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGI 125
+ C + ++ YA+ I V + WN++IRGYA ++ P A+++++ M G
Sbjct: 63 KLAAC-YAVCGHMPYAQHIFDQIVLKN-SFLWNSMIRGYACNNSPSRALFLYLKMLHFGQ 120
Query: 126 KPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACK 185
KP FTYPFVLKAC ++ G +V A V GL+ DVY N+++ Y A
Sbjct: 121 KPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARV 180
Query: 186 VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL---GFEPDETTMLVVLSACTE 242
VFD M R + SWN +++ V+N GEA G F D+ GF D TT+L +LSAC +
Sbjct: 181 VFDRMLVRDLTSWNTMMSGFVKN---GEARGAFEVFGDMRRDGFVGDRTTLLALLSACGD 237
Query: 243 LGNLSLGKWVHLQLI---ERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
+ +L +GK +H ++ E G V N L ++IDMY C +V CAR LF + +V +W
Sbjct: 238 VMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSW 297
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
+++I G + G A +ALELF M P+ VT + VL ACN
Sbjct: 298 NSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQ 341
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 163/534 (30%), Positives = 265/534 (49%), Gaps = 24/534 (4%)
Query: 1 MVRFPVPTTNHIFPPKPSNC-NSDLLSKARQC-LSFLKLCCSKK---HLYQIHAQIQVSG 55
MV ++ FP +C S + RQ LKL C H I + G
Sbjct: 55 MVSLGHLPNSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGG 114
Query: 56 LQN-----DAQILKELVRFCTL----SSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
L++ DA +++V L +S + AR + + + + + WN +I GY
Sbjct: 115 LEDARKVFDASSHRDVVSCTALITGYASRGDFRSARKVF-DEITERDVVSWNAMITGYVE 173
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS----GLDS 162
+ R EA+ +F +M R ++P E T V+ ACA+ + G QV + V G S
Sbjct: 174 NGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSS 233
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
+ N L+ Y C A +F+ + + VVSWN +I EA+ F +M
Sbjct: 234 SLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEML 293
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER--GTVLNCQLGTALIDMYAKCGA 280
G P++ T+L VL AC LG + +G+W+H+ + ++ G L T+LIDMYAKCG
Sbjct: 294 RSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGD 353
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
+ A +F+ M ++ +W+AMI G A HG A A +LFS M+ + + P+ +TF+G+L A
Sbjct: 354 IEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSA 413
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPI 400
C+H+G+++ G + F M + + P HY M D+L +G KEA I MP +P+ +
Sbjct: 414 CSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGV 473
Query: 401 VLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRR 460
+ +LL A H + ++L+++EP S + V+++N YA G WE V+ VR
Sbjct: 474 IWCSLLKACKKHG---NLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRG 530
Query: 461 FMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ G+KK+ G S +E+ +H F G IY +LE +++ ++ F
Sbjct: 531 VLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGF 584
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 179/369 (48%), Gaps = 40/369 (10%)
Query: 66 LVRFCTLSSS-KNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRG 124
L+ C +S L YA S+ + + + WN ++RG+A S P A+ +++ M G
Sbjct: 1 LLELCVVSPHFDGLPYAISVF-ETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLG 59
Query: 125 IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFY---------- 174
P +++PF+LK+CA+ EG Q+ A V K G D Y + +L+ Y
Sbjct: 60 HLPNSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDAR 119
Query: 175 ----GSCRRK-----------------RDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
S R R A KVFD++ ER VVSWN +IT VEN E
Sbjct: 120 KVFDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEE 179
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK----WVHLQLIERGTVLNCQLGT 269
A+ F +M PDE T++ V+SAC + G++ LG+ WV + G + ++
Sbjct: 180 ALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVN 239
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
ALID+Y+KCG V A LF + +V +W+ +I G +EAL LF M S P
Sbjct: 240 ALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECP 299
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEM--EHVHGIKPMRIHYHTMADILARAGHLKEAY 387
N VT L VL AC H G ++ G R+ H + + G+ ++ D+ A+ G ++ A+
Sbjct: 300 NDVTLLSVLPACAHLGAIDIG-RWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAH 358
Query: 388 TFIMNMPFQ 396
+M ++
Sbjct: 359 QVFNSMLYR 367
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 152/465 (32%), Positives = 244/465 (52%), Gaps = 13/465 (2%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+HAQI+ G +D + L+ + S ++ A+ + + + WN++I G A
Sbjct: 140 VHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGLAK 199
Query: 107 SDRPREAVWVFIDM-KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
EA VF +M ++ GI ++ +L ++ +++ ++ + + +V
Sbjct: 200 GGLYEEARKVFDEMPEKDGI-----SWNTMLDGYVKVGKMDDAFKLFDEMP----ERNVV 250
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
+ + +V Y A +FD M +++VSW +I++ E EA+ F +M+
Sbjct: 251 SWSTMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKAC 310
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+ D T++ +L+AC E G L LG+ +H + ++ AL+DMYAKCG + A
Sbjct: 311 LKLDNGTVMSILAACAESGLLGLGEKIHASIKNNNFKCTTEISNALVDMYAKCGRLNIAY 370
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F+ ++ +V +W+AM+ GLA HG+ +ALELF MK SPN VT +GVLCAC HAG
Sbjct: 371 DVFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMIGVLCACTHAG 430
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+++DG RYF ME + + P HY M D+L R G L+EA I NMP PN I+ L
Sbjct: 431 LIDDGIRYFSTMERDYTLVPEVEHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTL 490
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
L A +H+A + EV L+ELEP S N +++N YA G W V+N R M+++
Sbjct: 491 LGACRMHNAVE---LAREVLDHLVELEPTDSGNFSMLSNIYAAAGDWNCVANTRLRMRSI 547
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
G KK G S +E+ +H F S + IYQ++ L +K
Sbjct: 548 GTKKPSGASSIEVNNEVHEFTVFDRSHPKSDNIYQVINGLRHELK 592
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 177/387 (45%), Gaps = 16/387 (4%)
Query: 29 RQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
Q LS L C + + Q+HAQI S L D ++ +L+ +L L Y
Sbjct: 21 EQKLSDLHKCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATNAFNQVQY 80
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
N + +N +IR ++ + +P +A F M+R G FT+PF+LK C L
Sbjct: 81 PNVHL---YNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTGNVWLPVI 137
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRR--KRDACKVFDDM-CERSVVSWNVIITVC 205
V A + K G SDV+ N+L+ Y C A K+F M R VVSWN +I+
Sbjct: 138 ESVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGL 197
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
+ EA F +M E D + +L ++G + + ++ ER V
Sbjct: 198 AKGGLYEEARKVFDEMP----EKDGISWNTMLDGYVKVGKMDDAFKLFDEMPERNVV--- 250
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
+ ++ Y K G + AR+LF +M N+ +W+ ++ G A+ G A EA+ LF M+ +
Sbjct: 251 -SWSTMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKA 309
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
+ + T + +L AC +G++ G + +++ + K + + D+ A+ G L
Sbjct: 310 CLKLDNGTVMSILAACAESGLLGLGEKIHASIKN-NNFKCTTEISNALVDMYAKCGRLNI 368
Query: 386 AYTFIMNMPFQPNPIVLRALLSASSIH 412
AY + N + + A+L ++H
Sbjct: 369 AYD-VFNDIKNKDVVSWNAMLQGLAMH 394
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 157/499 (31%), Positives = 246/499 (49%), Gaps = 47/499 (9%)
Query: 50 QIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP----WNNLIRGYA 105
QIQ L+N + K+L+ +L ++ YA + D +P P +N LI+ Y+
Sbjct: 6 QIQAYTLRNGIEHTKQLI--VSLLQIPSIPYAHKLF-----DFIPKPTVFLYNKLIQAYS 58
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ ++ M +G P E ++ F+ ACA +S +G + + KSG DV+
Sbjct: 59 SHGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVF 118
Query: 166 -------------------------------TNNNLVRFYGSCRRKRDACKVFDDMCERS 194
T N+++ Y C A ++F M R+
Sbjct: 119 ALTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARN 178
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKD-LGFEPDETTMLVVLSACTELGNLSLGKWVH 253
V SW +I+ +N +A+ F+ M++ P+E T+ VL AC LG L +G+ +
Sbjct: 179 VTSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVGERIE 238
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYA 312
+ G N + AL++MYA+CG + A +F ++ N+ +W++MI+GLA HG
Sbjct: 239 VYARGNGYFKNLYVSNALLEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAVHGRC 298
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
+EA+ELF M +P+ VTF+GVL AC H GMV +G +F ME I P HY
Sbjct: 299 DEAIELFYKMLREGAAPDDVTFVGVLLACTHGGMVVEGQHFFESMERDFSIAPKLEHYGC 358
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELE 432
M D+L RAG L+EA+ I+ MP +P+ +V LL A S H + + L ELE
Sbjct: 359 MVDLLGRAGELREAHDLILRMPMEPDSVVWGTLLGACSFHG---HVELAEKAAGALFELE 415
Query: 433 PRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQ 492
P N VI++N YA G W+ V+ +R+ MK + K G S++E GG IH+F S
Sbjct: 416 PSNPGNYVILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFIEEGGHIHKFIVEDRSH 475
Query: 493 VELAGIYQILETLNLHMKV 511
IY +L+ +++ MK+
Sbjct: 476 SRSDEIYALLDEVSMKMKL 494
>gi|347954504|gb|AEP33752.1| chloroplast biogenesis 19, partial [Lobularia maritima]
Length = 496
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 149/456 (32%), Positives = 234/456 (51%), Gaps = 36/456 (7%)
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE- 147
+N S I W + I + + R EA F DM+ G++P T+ +L C + S +E
Sbjct: 27 LNLSTTISWTSRITLLSRNGRLAEAAKEFSDMRFAGVEPNHITFIALLSGCGDFSSGSES 86
Query: 148 -GMQVQANVTKSGLD--------------------------------SDVYTNNNLVRFY 174
G + K GLD + T N ++ Y
Sbjct: 87 FGDLLHGYACKLGLDRNHVMVGTAIIGMYSKHGRVSKARLVFDHMEGKNSMTWNTMIDGY 146
Query: 175 GSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTML 234
+ DA K+FD+M ER ++SW +I V+ + EA+ +F +M+ G EPD ++
Sbjct: 147 MRKGKIDDAYKLFDEMPERGLISWTAMINGFVKKGFHEEALVWFREMQSSGVEPDYVAII 206
Query: 235 VVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI 294
VL+ACT LG LS G WVH L+ R N ++ + ID++ +CG V A+ +F ME+
Sbjct: 207 AVLAACTNLGALSFGLWVHRYLVSRDFRNNVRVNNSSIDLHCRCGCVELAQPVFDHMEKR 266
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYF 354
V +W+++I+ + +G+A+E+L F M+ PN VTF G L AC+H G+VE+G RYF
Sbjct: 267 TVVSWNSVIVVFSANGHADESLVYFRRMQEEGFKPNAVTFTGALTACSHVGLVEEGLRYF 326
Query: 355 HEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDA 414
M+ + I P HY + D+ +RAG L++A + +MP +PN +V+ +LL+A H
Sbjct: 327 QTMKKEYRISPRIEHYGCLVDLYSRAGRLEDALNVVQSMPMKPNEVVIGSLLAACRTHGN 386
Query: 415 KYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMS 474
+ + + L + + N VI++N YA G WE S +RR MK +GLKK G S
Sbjct: 387 NTV--LAERLMKHLSDTNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFS 444
Query: 475 WVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+E+ H F +G + VE I ++LE L+ M+
Sbjct: 445 SIEIDDCTHVFMAGDSAHVETGYIREVLEILSSDMQ 480
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 140/422 (33%), Positives = 227/422 (53%), Gaps = 14/422 (3%)
Query: 73 SSSKNLTYARSILCNYVNDSVPI----PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPT 128
+SS N+ A+ + D +P+ WN +I GYA + +EA+ +F +M + ++P
Sbjct: 143 ASSGNIRSAQEMF-----DEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPD 197
Query: 129 EFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD 188
E T VL ACA+ + G QV + + G S++ N L+ Y C + AC +F+
Sbjct: 198 EGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFE 257
Query: 189 DMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSL 248
+ + VVSWN +I EA+ F +M G P++ T++ +L AC LG + +
Sbjct: 258 GLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDI 317
Query: 249 GKWVHLQLIER-GTVLNC-QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGL 306
G+W+H+ + ++ V N L T+LIDMYAKCG + A +F+ M ++ +W+AMI G
Sbjct: 318 GRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGF 377
Query: 307 AQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPM 366
A HG A +LFS M+ + I P+ +TF+G+L AC+H+G ++ G F M + I P
Sbjct: 378 AMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPK 437
Query: 367 RIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRR 426
HY M D+L +G KEA I MP +P+ ++ +LL A H + R
Sbjct: 438 LEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHG---NLELAESFAR 494
Query: 427 RLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFY 486
L+++EP + V+++N YA G W++V+ VR + G+KK+ G S +E+ +H F
Sbjct: 495 NLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFI 554
Query: 487 SG 488
G
Sbjct: 555 VG 556
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 178/366 (48%), Gaps = 42/366 (11%)
Query: 65 ELVRFCTLSSS-KNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRR 123
+L+ FC LS YA S+ + + + WN ++RGYA S P A+ +++ M
Sbjct: 2 KLLEFCVLSPHFDGFPYAISVFAT-IQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISL 60
Query: 124 GIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDA 183
G+ P +T+PF+LK+CA+ EG Q+ +V K G + D+Y + +L+ Y R DA
Sbjct: 61 GLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDA 120
Query: 184 CKVFDDMCER-------------------------------SVVSWNVIITVCVENLWLG 212
KVFD R VVSWN +I+ E
Sbjct: 121 HKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYK 180
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
EA+ F +M PDE TM+ VLSAC + ++ LG+ VH + + G N ++ ALI
Sbjct: 181 EALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALI 240
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
D+Y+KCG V A LF + +V +W+ +I G +EAL LF M S SPN V
Sbjct: 241 DLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDV 300
Query: 333 TFLGVLCACNHAGMVEDGYRYFH-----EMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
T + +L AC H G ++ G R+ H +++ V +R ++ D+ A+ G ++ A+
Sbjct: 301 TIVSILPACAHLGAIDIG-RWIHVYIDKKLKDVTNAPSLRT---SLIDMYAKCGDIEAAH 356
Query: 388 TFIMNM 393
+M
Sbjct: 357 QVFNSM 362
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 162/489 (33%), Positives = 241/489 (49%), Gaps = 18/489 (3%)
Query: 33 SFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
+ LK C K L Q +H + S ++D + L+ S L AR +
Sbjct: 56 TLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGS--LEEARKVF---- 109
Query: 90 NDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL 145
D +P + W LI GY+ DRP +A+ +F M R G P EFT V+KA A
Sbjct: 110 -DKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRG 168
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
G Q+ K G DS+V+ + L+ Y DA VFD + R+ VSWN +I
Sbjct: 169 CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH 228
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
+A+ F M GF P + + AC+ G L GKWVH +I+ G L
Sbjct: 229 ARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 288
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
G L+DMYAK G++ AR +F R+ + +V +W++++ AQHG+ EA+ F M+
Sbjct: 289 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRG 348
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
I PN ++FL VL AC+H+G++++G+ Y+ E+ GI HY T+ D+L RAG L
Sbjct: 349 GIRPNEISFLSVLTACSHSGLLDEGWHYY-ELMKKDGIVLEAWHYVTIVDLLGRAGDLNR 407
Query: 386 AYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANK 445
A FI MP +P + +ALL+A +H +G + EL+P VI+ N
Sbjct: 408 ALRFIEEMPIEPTAAIWKALLNACRMHK---NTELGAYAAEHVFELDPDDPGPHVILYNI 464
Query: 446 YAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
YA G W + VR+ MK G+KK SWVE+ +IH F + + + I + E +
Sbjct: 465 YASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEV 524
Query: 506 NLHMKVLNF 514
+K L +
Sbjct: 525 LAKIKELGY 533
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 144/293 (49%), Gaps = 8/293 (2%)
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
Y +LK C L +G V ++ +S D+ NN L+ Y C +A KVFD M
Sbjct: 54 YNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMP 113
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
ER V+W +I+ ++ +A+ F +M GF P+E T+ V+ A G
Sbjct: 114 ERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQ 173
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+H ++ G N +G+AL+D+Y + G + A+L+F +E N +W+A+I G A+
Sbjct: 174 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCG 233
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
E+ALELF M P++ ++ + AC+ G +E G ++ H G K + +
Sbjct: 234 TEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQG-KWVHAYMIKSGEKLVAFAGN 292
Query: 372 TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEV 424
T+ D+ A++G + +A + + R ++S +S+ A Q G GNE
Sbjct: 293 TLLDMYAKSGSIHDARKIF-------DRLAKRDVVSWNSLLTAYAQHGFGNEA 338
>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
gi|194688780|gb|ACF78474.1| unknown [Zea mays]
gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
Length = 695
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 156/486 (32%), Positives = 234/486 (48%), Gaps = 15/486 (3%)
Query: 35 LKLCC---SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LK CC IH +G Q + LV S + AR +
Sbjct: 113 LKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLV--LVYSKGGRIGDARRVFDGAGLG 170
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRR--GIKPTEFTYPFVLKACAEISGLNEGM 149
S WN ++ GYA + R+A+ VF +M+R +P EFT+ +LKAC+ + EG
Sbjct: 171 SGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGA 230
Query: 150 QVQANVTKSGLD--SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
QV A +T SG S+ LV Y CRR A +VF+ + ++V+ W ++ +
Sbjct: 231 QVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQ 290
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
+ EA+ F + G PD + V+ + + G+ VH I+ T +
Sbjct: 291 EGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSA 350
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
G +++DMY KCG A +F M NV +W+ M+ GL +HG EA+ LF M+ +
Sbjct: 351 GNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGV 410
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
P+ VT+L +L AC+HAG+V++ RYF + ++P HY M D+L RAG L+EA
Sbjct: 411 EPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREAR 470
Query: 388 TFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYA 447
I MP +P V + LLSA +H VG E LL ++ N V ++N A
Sbjct: 471 DLIRTMPMEPTVGVWQTLLSACRVHK---DVAVGREAGDVLLAMDGDNPVNYVTLSNVLA 527
Query: 448 EVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG---YDSQVELAGIYQILET 504
E G W + VR M+ GLKK G SWVE+G +H FY G ++ + I ++L
Sbjct: 528 EAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRD 587
Query: 505 LNLHMK 510
+ M+
Sbjct: 588 METRMR 593
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 113/230 (49%), Gaps = 10/230 (4%)
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
+L+A A S L G+Q+ +TK G SD NNL+ Y C AC+VF M +R+
Sbjct: 10 LLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRN 69
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDL----GFEPDETTMLVVLSACTELGNLSLGK 250
VVSW ++ V L G+A G + ++ P+E T+ L AC +G+ + G
Sbjct: 70 VVSWTALM---VGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGV 126
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQH 309
+H + G + + ++L+ +Y+K G +G AR +F + TW+AM+ G A
Sbjct: 127 GIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHA 186
Query: 310 GYAEEALELFSNMK--NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM 357
G+ +AL +F M+ P+ TF +L AC+ G +G + M
Sbjct: 187 GHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAM 236
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 131/315 (41%), Gaps = 12/315 (3%)
Query: 33 SFLKLCC---SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S LK C + + Q+HA + SG + + + L A +
Sbjct: 215 SLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLE 274
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+V I W ++ G+A + EA+ +F R G +P V+ A+ + + +G
Sbjct: 275 RKNV-IQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGR 333
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
QV K +DV N++V Y C +A ++F +M +VVSW ++ ++
Sbjct: 334 QVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHG 393
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL--NCQL 267
EAV F +M+ G EPDE T L +LSAC+ G + + + I R + +
Sbjct: 394 LGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRR-YFSCIRRDRTVRPKAEH 452
Query: 268 GTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQH---GYAEEALELFSNMK 323
++D+ + G + AR L M E V W ++ H EA ++ M
Sbjct: 453 YACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMD 512
Query: 324 NSSISPNYVTFLGVL 338
+ NYVT VL
Sbjct: 513 GDN-PVNYVTLSNVL 526
>gi|125541284|gb|EAY87679.1| hypothetical protein OsI_09093 [Oryza sativa Indica Group]
Length = 493
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 151/414 (36%), Positives = 213/414 (51%), Gaps = 39/414 (9%)
Query: 127 PTEFTYPFVLKACAEIS----GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRD 182
P + T VL ACA+ + V A V K S + + LVRFY + R
Sbjct: 65 PNDVTLLTVLSACADSPSSPLARRLALSVHARVLKL-FPSHLLLSTCLVRFYFASRLPHL 123
Query: 183 ACKVFDDMCERSVV-------------------------------SWNVIITVCVENLWL 211
A ++FD M RS V SW +I CV+N
Sbjct: 124 ALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRH 183
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
EA+ F M G EPD T++ V+SAC E+G L LG WVH ++ +G N ++ +L
Sbjct: 184 DEAINCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANSL 243
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
IDMYA+CG V AR +FS M + V +W++MI+G A +G +A+E F M+ P+
Sbjct: 244 IDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDA 303
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
VTF GVL AC+H G+ ++G RY+ M +GI HY + D+L R+G L+EA +
Sbjct: 304 VTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGRLEEAMRVVT 363
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGM 451
MP +PN +VL ALL+ +H G+ ++ + LLEL+P G N V+++N YA VG
Sbjct: 364 TMPMRPNEVVLGALLAGCRMHG---DVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGK 420
Query: 452 WEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
W+ VR MK GL+K G S VE+ G +H F SG S + I Q+L L
Sbjct: 421 WDGAGKVRSLMKARGLRKRPGYSAVEIDGDVHEFVSGDRSHPQAEEISQMLGLL 474
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 112/240 (46%), Gaps = 6/240 (2%)
Query: 89 VNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D +P P W LI G + R EA+ F M G++P T V+ ACAE+
Sbjct: 158 VFDGMPAPDKVSWTALIDGCVKNGRHDEAINCFRAMLLDGVEPDYVTLIAVISACAEVGA 217
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L GM V V + GL+ +V N+L+ Y C + A +VF M +R+VVSWN +I
Sbjct: 218 LGLGMWVHRLVVRQGLERNVRIANSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVG 277
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG-KWVHLQLIERGTVL 263
N +AV +F M+ GF+PD T VL+AC+ G G ++ L E G
Sbjct: 278 FAANGRCADAVEHFEAMRREGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAA 337
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEALELFSNM 322
+ ++D+ + G + A + + M N A++ G HG A +L ++
Sbjct: 338 RMEHYGCVVDLLGRSGRLEEAMRVVTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHL 397
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 140/419 (33%), Positives = 224/419 (53%), Gaps = 3/419 (0%)
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
D I W ++ G + EA+ VF M+ G+ ++T+ +L AC ++ L EG Q
Sbjct: 240 DRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQ 299
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+ A +T++ + +V+ + LV Y CR R A VF M R+++SW +I +N
Sbjct: 300 IHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNAC 359
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
EAV F +M+ G +PD+ T+ V+S+C L +L G H + G + + A
Sbjct: 360 SEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNA 419
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
L+ +Y KCG++ A LF M + +W+A++ G AQ G A+E ++LF M + + P+
Sbjct: 420 LVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPD 479
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
VTF+GVL AC+ AG+VE G YF M+ HGI P+ HY M D+ +R+G KEA FI
Sbjct: 480 GVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFI 539
Query: 391 MNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVG 450
MP P+ LLS+ + + +G LLE +P+ + V++ + +A G
Sbjct: 540 KQMPHSPDAFGWATLLSSCRL---RGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKG 596
Query: 451 MWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
W +V+++RR M++ +KK G SW++ +H F + S + IY+ LE LN M
Sbjct: 597 QWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKM 655
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 152/334 (45%), Gaps = 33/334 (9%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRR-GIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ +N LI G++ + P +V ++ + R ++PT T ++ + +S G V
Sbjct: 111 VSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHC 170
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDA------------------------CKVFDD 189
V + G + + + LV Y RDA CK+ +D
Sbjct: 171 QVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIED 230
Query: 190 -------MCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
M +R ++W ++T +N EA+ F +M+ G D+ T +L+AC
Sbjct: 231 AKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGA 290
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
L L GK +H + N +G+AL+DMY+KC ++ A +F RM N+ +W+AM
Sbjct: 291 LAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAM 350
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
I+G Q+ +EEA+ FS M+ I P+ T V+ +C + +E+G + FH + V G
Sbjct: 351 IVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ-FHCLALVSG 409
Query: 363 IKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
+ + + + + G +++A+ M F
Sbjct: 410 LMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH 443
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG-YFV 219
D +++T N L+ R D ++F M ER VS+N +IT +V Y
Sbjct: 76 DPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRA 135
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+++ P T+ ++ + L + +LG VH Q++ G +G+ L+DMYAK G
Sbjct: 136 LLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMG 195
Query: 280 AVGCARLLFSRMEEINV-------------------------------WTWSAMILGLAQ 308
+ AR +F ME V TW+ M+ GL Q
Sbjct: 196 LIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQ 255
Query: 309 HGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
+G EAL++F M+ + + TF +L AC +E+G
Sbjct: 256 NGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEG 297
>gi|297599966|ref|NP_001048246.2| Os02g0769900 [Oryza sativa Japonica Group]
gi|46805413|dbj|BAD16915.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255671273|dbj|BAF10160.2| Os02g0769900 [Oryza sativa Japonica Group]
Length = 438
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 151/414 (36%), Positives = 213/414 (51%), Gaps = 39/414 (9%)
Query: 127 PTEFTYPFVLKACAEIS----GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRD 182
P + T VL ACA+ + V A V K S + + LVRFY + R
Sbjct: 10 PNDVTLLTVLSACADSPSSPLARRLALSVHARVLKL-FPSHLLLSTCLVRFYFASRLPHL 68
Query: 183 ACKVFDDMCERSVV-------------------------------SWNVIITVCVENLWL 211
A ++FD M RS V SW +I CV+N
Sbjct: 69 ALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRH 128
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
EA+ F M G EPD T++ V+SAC E+G L LG WVH ++ +G N ++ +L
Sbjct: 129 DEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANSL 188
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
IDMYA+CG V AR +FS M + V +W++MI+G A +G +A+E F M+ P+
Sbjct: 189 IDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDA 248
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
VTF GVL AC+H G+ ++G RY+ M +GI HY + D+L R+G L+EA +
Sbjct: 249 VTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEAMRVVT 308
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGM 451
MP +PN +VL ALL+ +H G+ ++ + LLEL+P G N V+++N YA VG
Sbjct: 309 TMPMRPNEVVLGALLAGCRMHG---DVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGK 365
Query: 452 WEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
W+ VR MK GL+K G S VE+ G +H F SG S + I Q+L L
Sbjct: 366 WDGAGKVRSLMKARGLRKRPGYSAVEIDGDVHEFVSGDRSHPQAEEISQMLGLL 419
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 112/240 (46%), Gaps = 6/240 (2%)
Query: 89 VNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D +P P W LI G + R EA+ F M G++P T V+ ACAE+
Sbjct: 103 VFDGMPAPDKVSWTALIDGCVKNGRHDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGA 162
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L GM V V + GL+ +V N+L+ Y C + A +VF M +R+VVSWN +I
Sbjct: 163 LGLGMWVHRLVVRQGLERNVRIANSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVG 222
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG-KWVHLQLIERGTVL 263
N +AV +F M+ GF+PD T VL+AC+ G G ++ L E G
Sbjct: 223 FAANGRCADAVEHFEAMRREGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAA 282
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEALELFSNM 322
+ ++D+ + G + A + + M N A++ G HG A +L ++
Sbjct: 283 RMEHYGCVVDLLGRSGQLEEAMRVVTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHL 342
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 155/479 (32%), Positives = 241/479 (50%), Gaps = 9/479 (1%)
Query: 40 SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNN 99
S +H +IH G D + ++ + + YAR I + W+
Sbjct: 235 SLRHGKEIHGFCVRRGFVGDVVVGTGILD--VYGKCQCIDYARRIFDMMGIVKNEVTWSA 292
Query: 100 LIRGYAWSDRPREAVWVFIDM---KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
++ Y D REA+ +F + K I + T V++ CA ++ L+ G +
Sbjct: 293 MVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAI 352
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
KSG D+ N L+ Y C A + F++M R VS+ II+ V+N E +
Sbjct: 353 KSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLR 412
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F++M+ G P++ T+ VL AC L L G H I G + + ALIDMYA
Sbjct: 413 MFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYA 472
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KCG + AR +F RM + + +W+ MI+ HG EAL LF NM++ + P+ VTF+
Sbjct: 473 KCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFIC 532
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
++ AC+H+G+V +G +F+ M GI P HY M D+L+RAG KE ++FI MP +
Sbjct: 533 LISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLE 592
Query: 397 PNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVS 456
P+ V ALLSA ++ +G V +++ +L P + N V+++N Y+ VG W+ +
Sbjct: 593 PDVRVWGALLSACRVYK---NVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAA 649
Query: 457 NVRRFMKNVGLKKMKGMSWVELGGSIHRFY-SGYDSQVELAGIYQILETLNLHMKVLNF 514
VR K G +K G SW+E+ G +H F GY S +L I L+ L + MK L +
Sbjct: 650 QVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGY 708
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 181/366 (49%), Gaps = 28/366 (7%)
Query: 85 LCNYVNDSVP------IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKA 138
+ +V D +P + WN LIR YAW+ EA+ ++ M GI P FT+PFVLKA
Sbjct: 69 IARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKA 128
Query: 139 CAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSW 198
C+ + +EG ++ ++ + L+S+VY + LV FY C DA +VFD M +R VV+W
Sbjct: 129 CSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAW 188
Query: 199 NVIIT-VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLI 257
N +I+ + E V+M++ P+ +T++ VL A ++ +L GK +H +
Sbjct: 189 NSMISGFSLHEGSYDEVARLLVQMQN-DVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCV 247
Query: 258 ERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI-NVWTWSAMILGLAQHGYAEEAL 316
RG V + +GT ++D+Y KC + AR +F M + N TWSAM+ + EAL
Sbjct: 248 RRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREAL 307
Query: 317 ELFSN---MKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY--- 370
ELF +K+ I + VT V+ C + + G H + IK +
Sbjct: 308 ELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTG-----TCLHCYAIKSGFVLDLMV 362
Query: 371 -HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLL 429
+T+ + A+ G + A F N + LR +S ++I Q+G E R L
Sbjct: 363 GNTLLSMYAKCGIINGAMRFF-------NEMDLRDAVSFTAIISGYVQNGNSEEGLRMFL 415
Query: 430 ELEPRG 435
E++ G
Sbjct: 416 EMQLSG 421
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 164/508 (32%), Positives = 254/508 (50%), Gaps = 15/508 (2%)
Query: 2 VRFPVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQ 61
+R + + P + N D L A ++ + C S + +H ++ S N
Sbjct: 17 IRLYNSFASQLSPTFHAFSNVDSLVSA--LITAISTCSSISYCRALHCRVIKSVNYNHGF 74
Query: 62 ILKELVR-FCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDM 120
I +LV + L +K+ L + + D + WN+LI G+ S R + + +
Sbjct: 75 IGDQLVSSYVELGCTKDALE----LFDELPDKDLVSWNSLISGF--SRRADLGICLGLLF 128
Query: 121 KRR---GIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSC 177
+ R G+KP E T V+ ACA + L+ G + KSG+ +V N+L+ YG C
Sbjct: 129 RMRFEMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKC 188
Query: 178 RRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVL 237
AC +F+ M +S+VSWN ++ V V + +GYF+ M+ G D+ T++ +L
Sbjct: 189 GCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLL 248
Query: 238 SACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVW 297
AC LG L + VH ++ G N + TAL+D+YAK G + + +F M +
Sbjct: 249 LACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAV 308
Query: 298 TWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM 357
W+AM+ A HG EA+E F M + P++VTF +L AC+H+G+VE+G YF M
Sbjct: 309 AWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIM 368
Query: 358 EHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQ 417
+G++ HY M D+L R+GHL +AY I +MP +PN V AL+ A + +
Sbjct: 369 YEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIGACRV---RGN 425
Query: 418 DGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVE 477
+G EV RL L+P S+N + ++N Y+ G W S VR MK L + G S++E
Sbjct: 426 IELGKEVAERLFSLDPSDSRNYITLSNMYSAAGQWRDASKVRALMKERVLIRNPGCSYIE 485
Query: 478 LGGSIHRFYSGYDSQVELAGIYQILETL 505
G IH F G S + IY LE L
Sbjct: 486 HGNKIHCFVMGDQSHPDTEQIYNKLEEL 513
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 140/420 (33%), Positives = 225/420 (53%), Gaps = 5/420 (1%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN I RP+EA+ FI+ +R G +P T+ L AC++ L+ GMQ+ V
Sbjct: 177 WNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVF 236
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
+SG D+DV N L+ FYG C++ R + +F +M ++ VSW ++ V+N +A
Sbjct: 237 RSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASV 296
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
+++ + E + + VLSAC + L LG+ +H ++ N +G+AL+DMY
Sbjct: 297 LYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYG 356
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM--KNSSISPNYVTF 334
KCG + + F M E N+ T +++I G A G + AL LF +M + +PNY+TF
Sbjct: 357 KCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTF 416
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ +L AC+ AG VE+G + F M+ +GI+P HY + D+L RAG +++A+ FI MP
Sbjct: 417 VSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMP 476
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
+P V AL +A +H + +G L +L+P+ S N V+++N +A G W +
Sbjct: 477 IKPTISVWGALQNACRMHGKPH---LGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAE 533
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ VR MK VG+KK G SW+ + +H F + S I +L L M+ +
Sbjct: 534 ANTVREEMKGVGIKKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAGY 593
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 147/318 (46%), Gaps = 10/318 (3%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +L+ G A + A++ F +M+R G+ P +FT+P V KA A + G Q+ A
Sbjct: 74 VSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHAL 133
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K G DV+ + Y R + DA K+FD++ ER++ +WN I+ V + EA
Sbjct: 134 AVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEA 193
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F++ + +G +P+ T L+AC++ L LG +H + G + + LID
Sbjct: 194 IEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDF 253
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y KC + + ++F+ M N +W +++ Q+ E+A L+ + + +
Sbjct: 254 YGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMI 313
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY----HTMADILARAGHLKEAYTFI 390
VL AC +E G H H +K + D+ + G ++++
Sbjct: 314 SSVLSACAGMAGLELGRSI-----HAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAF 368
Query: 391 MNMPFQPNPIVLRALLSA 408
MP + N + L +L+
Sbjct: 369 DEMP-EKNLVTLNSLIGG 385
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 143/352 (40%), Gaps = 31/352 (8%)
Query: 134 FVLKACAEISGLNEGMQVQANVTKSGLDSDV--YTNNNLVRFYGSCRRKRDACKVFDDMC 191
+LK S + G V A + K+ LDS + N L+ Y A V
Sbjct: 11 LLLKNAISTSSMRLGRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARLVLRLTP 69
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
R+VVSW +++ +N A+ F +M+ G P++ T V A L GK
Sbjct: 70 ARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQ 129
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+H ++ G +L+ +G + DMY K AR LF + E N+ TW+A I G
Sbjct: 130 IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGR 189
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
+EA+E F + PN +TF G L AC+ +++ G + H + G Y+
Sbjct: 190 PKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQ-MHGLVFRSGFDTDVSVYN 248
Query: 372 TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLEL 431
+ D + ++ + M + N + +L++A V N + L
Sbjct: 249 GLIDFYGKCKQIRSSEIIFAEMGMK-NAVSWCSLVAAY----------VQNHEDEKASVL 297
Query: 432 EPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIH 483
R + +V ++ FM + L GM+ +ELG SIH
Sbjct: 298 YLRSRKEIVETSD----------------FMISSVLSACAGMAGLELGRSIH 333
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 122/272 (44%), Gaps = 13/272 (4%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILCNYVNDSVPIPWNNLIR 102
Q+H + SG D + L+ F C S + +A + N V+ W +L+
Sbjct: 230 QMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVS------WCSLVA 283
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
Y + +A +++ ++ ++ ++F VL ACA ++GL G + A+ K+ ++
Sbjct: 284 AYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVER 343
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM- 221
+++ + LV YG C D+ + FD+M E+++V+ N +I + A+ F M
Sbjct: 344 NIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMA 403
Query: 222 -KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER-GTVLNCQLGTALIDMYAKCG 279
+ G P+ T + +LSAC+ G + G + + G + + ++DM + G
Sbjct: 404 PRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAG 463
Query: 280 AVGCARLLFSRME-EINVWTWSAMILGLAQHG 310
V A +M + + W A+ HG
Sbjct: 464 MVEQAFEFIKKMPIKPTISVWGALQNACRMHG 495
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 155/516 (30%), Positives = 253/516 (49%), Gaps = 38/516 (7%)
Query: 34 FLKLCCSKKHLY----QIHAQIQVSGLQNDAQILKELV-------------RFCTLSSSK 76
FL C+K + QIHAQ+ G + D L+ + SS +
Sbjct: 88 FLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQR 147
Query: 77 NLTYARSILCNY---------------VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMK 121
++ +++ Y + + + WN +I GY + EA+ +F +M
Sbjct: 148 DVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMM 207
Query: 122 RRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS-GLDSDVYTNNNLVRFYGSCRRK 180
R ++P E T VL ACA+ + G ++ V G S + N + Y C
Sbjct: 208 RTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDV 267
Query: 181 RDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
A +F+ + + VVSWN +I EA+ F +M G P++ TML VL AC
Sbjct: 268 EIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPAC 327
Query: 241 TELGNLSLGKWVHLQLIER--GTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
LG + +G+W+H+ + +R G L T+LIDMYAKCG + A +F+ M ++ +
Sbjct: 328 AHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSS 387
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
W+AMI G A HG A A +LFS M+ + I P+ +T +G+L AC+H+G+++ G F +
Sbjct: 388 WNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVT 447
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD 418
+ I P HY M D+L AG KEA I MP +P+ ++ +LL A +H
Sbjct: 448 QDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHG---NL 504
Query: 419 GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVEL 478
+ ++L+E+EP S + V+++N YA G WE V+ +R + G+KK+ G S +E+
Sbjct: 505 ELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEI 564
Query: 479 GGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+H F G + IY++LE +++ ++ F
Sbjct: 565 DSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGF 600
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 184/381 (48%), Gaps = 37/381 (9%)
Query: 48 HAQIQVSGLQNDAQILKELVRFCTLSSS-KNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
HAQ+ +GL N L +L+ C +S L YA S+ ++ I WN ++RG A
Sbjct: 2 HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLI-WNTMLRGLAS 60
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
S + +++ M G P +T+PF+LK+CA+ EG Q+ A V K G + D Y
Sbjct: 61 SSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYA 120
Query: 167 NNNLVRFYGSCRRKRDA--------------C-----------------KVFDDMCERSV 195
+ +L+ Y R DA C KVFD + ER V
Sbjct: 121 HTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDV 180
Query: 196 VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQ 255
VSWN +IT VEN EA+ F +M PDE T++ VLSAC + G++ LG+ +H
Sbjct: 181 VSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTL 240
Query: 256 LIE-RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEE 314
+ + G + ++ A I +Y+KCG V A LF + +V +W+ +I G +E
Sbjct: 241 VDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKE 300
Query: 315 ALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM--EHVHGIKPMRIHYHT 372
AL LF M S SPN VT L VL AC H G ++ G R+ H + + G+ +
Sbjct: 301 ALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIG-RWIHVYIDKRLKGVTNGSALRTS 359
Query: 373 MADILARAGHLKEAYTFIMNM 393
+ D+ A+ G ++ A+ +M
Sbjct: 360 LIDMYAKCGDIEAAHQVFNSM 380
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 164/507 (32%), Positives = 251/507 (49%), Gaps = 44/507 (8%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGY- 104
Q HAQI + GLQ +A + ++V +SS +L A ++ + +++ + +N++IR Y
Sbjct: 98 QAHAQIVLHGLQPNAFLAAKMV--AMYASSGDLDSA-VVVFDRIDNPSSLLYNSIIRAYT 154
Query: 105 --AWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
+ + M G+ FT PFVLK+CA++S + G V + GL+
Sbjct: 155 RHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEG 214
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMC------------------------------- 191
D Y +L+ Y C DA K+FD M
Sbjct: 215 DFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERME 274
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE--PDETTMLVVLSACTELGNLSLG 249
R++VSW +I+ +N + +A+G F +M G E P+ T++ VL AC + L G
Sbjct: 275 HRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERG 334
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEE--INVWTWSAMILGLA 307
+ +H G LN + TAL MYAKC ++ AR F + + N+ W+ MI A
Sbjct: 335 RRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYA 394
Query: 308 QHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
HG EA+ +F NM + + P+ VTF+G+L C+H+G+++ G +F++M +H ++P
Sbjct: 395 SHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRV 454
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRR 427
HY + D+L RAG L EA I MP Q P V ALL+A H + RR
Sbjct: 455 EHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHR---NLEIAELAARR 511
Query: 428 LLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYS 487
L LEP S N V+++N YAE GMWE+V +R +K G+KK G SW+E+ G H F
Sbjct: 512 LFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMG 571
Query: 488 GYDSQVELAGIYQILETLNLHMKVLNF 514
S + IY+ LE L +K+ +
Sbjct: 572 ADKSHPQAKEIYKFLEALPEKIKMAGY 598
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 114/262 (43%), Gaps = 36/262 (13%)
Query: 127 PTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKV 186
P +Y + + + + G Q A + GL + + +V Y S A V
Sbjct: 75 PHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVV 134
Query: 187 FDDMCERSVVSWNVIITVCVEN---LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
FD + S + +N II + + + +M LG D T+ VL +C +L
Sbjct: 135 FDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADL 194
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFS-------------- 289
+ +G+ VH Q + G + +G +LIDMY KCG +G AR LF
Sbjct: 195 SRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALI 254
Query: 290 -----------------RMEEINVWTWSAMILGLAQHGYAEEALELFSNM--KNSSISPN 330
RME N+ +W+AMI G Q+G+AE+AL LF M S + PN
Sbjct: 255 AGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPN 314
Query: 331 YVTFLGVLCACNHAGMVEDGYR 352
+VT + VL AC + +E G R
Sbjct: 315 WVTIVSVLPACAQSAALERGRR 336
>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
Length = 864
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 140/467 (29%), Positives = 245/467 (52%), Gaps = 6/467 (1%)
Query: 48 HAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWS 107
H +I L+ D +L L+ S + AR + + S+ + WN +I Y +
Sbjct: 76 HGKIIRIDLEGDVTLLNVLIN--AYSKCGFVELARQVFDGMLERSL-VSWNTMIGLYTRN 132
Query: 108 DRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTN 167
EA+ +F++M+ G K +EFT VL AC E ++ K+ +D ++Y
Sbjct: 133 RMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVG 192
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
L+ Y C +DA +VF+ M ++S V+W+ ++ V+N EA+ + + + + E
Sbjct: 193 TALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE 252
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
++ T+ V+ AC+ L L GK +H + + G N + ++ +DMYAKCG++ + ++
Sbjct: 253 QNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYII 312
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMV 347
FS ++E N+ W+ +I G A+H +E + LF M+ + PN VTF +L C H G+V
Sbjct: 313 FSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 372
Query: 348 EDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLS 407
E+G R+F M +G+ P +HY M DIL RAG L EAY I ++PF P + +LL+
Sbjct: 373 EEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 432
Query: 408 ASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGL 467
+ ++ V E +L ELEP + N V+++N YA WE+++ R+ +++ +
Sbjct: 433 SCRVYKNLELAEVAAE---KLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDV 489
Query: 468 KKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
KK++G SW+++ +H F G + I L+ L + + +
Sbjct: 490 KKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGY 536
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 130/253 (51%), Gaps = 1/253 (0%)
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
+L+ CA + E + + L+ DV N L+ Y C A +VFD M ERS
Sbjct: 59 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 118
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHL 254
+VSWN +I + N EA+ F++M++ GF+ E T+ VLSAC + K +H
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 178
Query: 255 QLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEE 314
++ LN +GTAL+D+YAKCG + A +F M++ + TWS+M+ G Q+ EE
Sbjct: 179 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 238
Query: 315 ALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMA 374
AL L+ + S+ N T V+CAC++ + +G + H + G +
Sbjct: 239 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEG-KQMHAVICKSGFGSNVFVASSAV 297
Query: 375 DILARAGHLKEAY 387
D+ A+ G L+E+Y
Sbjct: 298 DMYAKCGSLRESY 310
>gi|357137130|ref|XP_003570154.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Brachypodium distachyon]
Length = 622
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 157/480 (32%), Positives = 245/480 (51%), Gaps = 21/480 (4%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSS-SKNLTYARSILCNYVNDSVPIPWNNLIRGY 104
+ HA+ GL + + L+ C L S + YA +I +++ +N L+RG+
Sbjct: 60 KAHARHVKLGLDRSPRHARPLLAACALGSWPGGMEYAAAIFAA-LDEPEAFDYNTLMRGH 118
Query: 105 AWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS-D 163
D P A+ ++ M +G++P +T+PFVLKACA ++ +G Q+ +V K G D
Sbjct: 119 VAHDDPAAALRLYAAMLEQGVEPDRYTFPFVLKACARLAASGQGRQLHGHVAKLGFSQHD 178
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVCV---ENLWLGEAVGYFV 219
+ N+L+ FYG C A + F+ M E S + + + LW + + F
Sbjct: 179 EHVGNSLISFYGRCGEPELARRAFEQMEAEESTTAASWSALLAAYTRAGLW-ADCLDSFG 237
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
M G P+E++M+ LSAC LG +G+ +H L+ LN + T+L+DMYAKCG
Sbjct: 238 AMARAGGRPEESSMVSALSACAHLGAYDVGRSIHCALLRNTVALNTFMETSLVDMYAKCG 297
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
+ A +F M+ N WT+SAM+ GLA HG +AL++F M P+ ++G+L
Sbjct: 298 CIDKASAVFDAMDGKNEWTYSAMVSGLALHGDGLKALQVFDAMAREGHKPDEAVYVGILN 357
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
AC+ +G++E+G R F M H + P HY M D++ARAG L +A I +MP P
Sbjct: 358 ACSRSGLLEEGLRCFDRMRLEHKVAPNAQHYGCMVDLMARAGRLDDARALIGSMPTGPTD 417
Query: 400 IVLRALLSASSIHDAKYQDGVGN-EVRRRLLE-LEPRGSQNL---VIVANKYAEVGMWEK 454
R+LL+A IH GN E+ R L+ L G+ N VI+A+ +A W+
Sbjct: 418 AAWRSLLNACRIH--------GNVELAERALQGLSGIGAVNAGDYVILADMHARTKNWDA 469
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ +R N GL + G S VE+ G HRF S S A IY++L + ++ +
Sbjct: 470 AAALRTEAANRGLAQAPGFSAVEVHGRAHRFASQDRSHPRTAEIYEMLHQMEWQLRFEGY 529
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 157/431 (36%), Positives = 236/431 (54%), Gaps = 13/431 (3%)
Query: 88 YVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS 143
YV +P + N +I GYA +D EA+ +F +M+ G+ P+E T+ +L AC
Sbjct: 607 YVFSCMPSRSVVSMNAIIAGYAQNDLV-EAIDLFQEMQNEGLNPSEITFASLLDACTGPY 665
Query: 144 GLNEGMQVQANVTKSGL--DSDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNV 200
LN G Q+ + K GL D D + +L+ Y + +RK DA +F + +S + W
Sbjct: 666 KLNLGRQIHCLIQKRGLLYDGD-FLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTA 724
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
II+ +N EA+ + +M PD+ T VL AC+ L +L G+ +H + G
Sbjct: 725 IISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVG 784
Query: 261 TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN-VWTWSAMILGLAQHGYAEEALELF 319
+ G+A++DMYAKCG + + +F M N V +W++MI+G A++GYAE AL++F
Sbjct: 785 LDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIF 844
Query: 320 SNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILAR 379
MK++ I P+ VTFLGVL AC+HAG V +G F M H + I P H M D+L R
Sbjct: 845 DEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGR 904
Query: 380 AGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNL 439
G LKEA FI + F+PN ++ LL A IH D G +L+ELEP S
Sbjct: 905 WGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHG---DDIRGRRAAEKLIELEPENSSPY 961
Query: 440 VIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIY 499
V+++N YA G W++V++VRR M+ GL+K+ G SW+ +G + F +G I+
Sbjct: 962 VLLSNIYAASGNWDEVNSVRRAMREKGLRKLPGCSWIVVGQKTNLFVAGDKFHPSAGEIH 1021
Query: 500 QILETLNLHMK 510
+L+ L MK
Sbjct: 1022 ALLKDLIALMK 1032
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 153/306 (50%), Gaps = 13/306 (4%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I G+ EA+ F +M + G+K T T VL A A + LN G+ V A
Sbjct: 315 VAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQ 374
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K GL+S+VY ++L+ Y C + A KVFD + ER++V WN ++ +N + +
Sbjct: 375 AIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKV 434
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M+ GF PDE T +LSAC L L +G+ +H +I+ N + L+DM
Sbjct: 435 MKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDM 494
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCGA+ AR F + + +W+A+I+G Q +EA +F M I+P+ V+
Sbjct: 495 YAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSL 554
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVH------GIKPMRIHYHTMADILARAGHLKEAYT 388
+L C + +E G E VH G++ ++ D+ + G ++ A
Sbjct: 555 ASILSGCANLQALEQG-------EQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARY 607
Query: 389 FIMNMP 394
MP
Sbjct: 608 VFSCMP 613
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 155/296 (52%), Gaps = 4/296 (1%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+HAQ GL ++ + L+ + + + A+ + + +++ + WN ++ GYA
Sbjct: 371 VHAQAIKQGLNSNVYVGSSLINM--YAKCEKMEAAKKVF-DALDERNLVLWNAMLGGYAQ 427
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+ + + +F +M+ G P EFTY +L ACA + L G Q+ + + K + +++
Sbjct: 428 NGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFV 487
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
N LV Y C +A + F+ + R VSWN II V+ EA F +M G
Sbjct: 488 ENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGI 547
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
PDE ++ +LS C L L G+ VH L++ G G++LIDMY KCGA+ AR
Sbjct: 548 APDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARY 607
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
+FS M +V + +A+I G AQ+ EA++LF M+N ++P+ +TF +L AC
Sbjct: 608 VFSCMPSRSVVSMNAIIAGYAQNDLV-EAIDLFQEMQNEGLNPSEITFASLLDACT 662
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 183/400 (45%), Gaps = 48/400 (12%)
Query: 73 SSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
S +L AR I + V D + W +I GY P EA+ VF DM++ G+ P + +
Sbjct: 228 SKCGSLVDARKIF-DAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAF 286
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCE 192
V+ AC + L+ DAC +F M
Sbjct: 287 VTVITACVGLGRLD-----------------------------------DACDLFVQMPN 311
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
+VV+WNV+I+ V+ EA+ +F M G + +T+ VLSA L L+ G V
Sbjct: 312 TNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLV 371
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H Q I++G N +G++LI+MYAKC + A+ +F ++E N+ W+AM+ G AQ+GYA
Sbjct: 372 HAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYA 431
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
+ ++LFS M+ P+ T+ +L AC +E G R H H + +T
Sbjct: 432 SKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMG-RQLHSFIIKHNFEYNLFVENT 490
Query: 373 MADILARAGHLKEA---YTFIMNMP-FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRL 428
+ D+ A+ G L+EA + FI N N I++ + + +D N RR +
Sbjct: 491 LVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYV-------QEEDEDEAFNMFRRMI 543
Query: 429 LELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLK 468
L+ +L + + A + E+ V F+ GL+
Sbjct: 544 LDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQ 583
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 125/243 (51%), Gaps = 5/243 (2%)
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+ A K G S + +V Y C A K F+ + +R +++WN ++++
Sbjct: 103 IHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGS 162
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
L + + F +++ G P++ T +VLS+C L ++ LGK VH +I+ G N +
Sbjct: 163 LEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGS 222
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
LIDMY+KCG++ AR +F + + + +W+AMI G Q G EEAL++F +M+ + P+
Sbjct: 223 LIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPD 282
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
V F+ V+ AC G ++D F +M + + + ++ M + G EA F
Sbjct: 283 QVAFVTVITACVGLGRLDDACDLFVQMPNTNVVA-----WNVMISGHVKRGCDIEAIDFF 337
Query: 391 MNM 393
NM
Sbjct: 338 KNM 340
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 122/294 (41%), Gaps = 38/294 (12%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
IHAQ G + ++ +V + N+ +A N + + WN+++ Y+
Sbjct: 103 IHAQTLKFGFGSKGRLGSAIVDL--YAKCGNVEFAAKAF-NQLEKRDILAWNSVLSMYSR 159
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+ +W F ++ G+ P +FTY VL +CA + ++ G QV V K G + + +
Sbjct: 160 QGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFC 219
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
+L+ Y C DA K+FD + + VSW +I V+ EA+ F M+ LG
Sbjct: 220 EGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGL 279
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
PD+ + V++AC LG L C
Sbjct: 280 VPDQVAFVTVITACVGLGRLDDA---------------CD-------------------- 304
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
LF +M NV W+ MI G + G EA++ F NM + + T VL A
Sbjct: 305 LFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSA 358
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 87/165 (52%), Gaps = 14/165 (8%)
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
K +H Q ++ G +LG+A++D+YAKCG V A F+++E+ ++ W++++ ++
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQ 160
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH-GIKPMRI 368
G E+ + F +++N +SPN T+ VL +C ++ G + VH G+ M
Sbjct: 161 GSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLG-------KQVHCGVIKMGF 213
Query: 369 HYH-----TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
++ ++ D+ ++ G L +A I + P+ + A+++
Sbjct: 214 EFNSFCEGSLIDMYSKCGSLVDARK-IFDAVVDPDTVSWTAMIAG 257
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 134/404 (33%), Positives = 224/404 (55%), Gaps = 9/404 (2%)
Query: 91 DSVPI----PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +PI WN +I GYA + +EA+ +F +M + ++P E T V+ ACA+ + +
Sbjct: 193 DEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIE 252
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G QV + + G S++ N L+ Y C AC +F+ + + V+SWN +I
Sbjct: 253 LGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYT 312
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER--GTVLN 264
EA+ F +M G P++ TML +L AC LG + +G+W+H+ + +R G
Sbjct: 313 HMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANA 372
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
T+LIDMYAKCG + A+ +F + ++ +W+AMI G A HG A A ++FS M+
Sbjct: 373 SSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRK 432
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ I P+ +TF+G+L AC+H+GM++ G F M+ + I P HY M D+L +G K
Sbjct: 433 NEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFK 492
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
EA I M +P+ ++ +LL A ++ A + +G + L+++EP+ + V+++N
Sbjct: 493 EAEEMINTMEMEPDGVIWCSLLKACKMY-ANVE--LGESYAQNLIKIEPKNPGSYVLLSN 549
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
YA G W +V+ +R + + G+KK+ G S +E+ +H F G
Sbjct: 550 IYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 593
>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
Length = 848
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 152/464 (32%), Positives = 242/464 (52%), Gaps = 6/464 (1%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
IHA++ +Q++ + L+ S N A SI N + + W ++I G+
Sbjct: 379 IHAELVKRPIQSNVALQSALLTM--YSKCGNSDDANSIF-NTIKGRDVVAWGSMISGFCQ 435
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+ + EA+ + M G KP V+ AC + +N G + KSGL+ DV+
Sbjct: 436 NRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFV 495
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
++LV Y + + VF DM +++V+WN II+ N ++ F +M G
Sbjct: 496 ASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGL 555
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
PD ++ VL + + + L GK VH LI + + QL ALIDMY KCG + A+
Sbjct: 556 FPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQH 615
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
+F M + N+ TW+ MI G HG +A+ LF M++ I+P+ +TF+ +L +CNH G
Sbjct: 616 IFQNMLQTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPDDITFISLLTSCNHCGF 675
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALL 406
+E+G + F M HGI+P HY + D+L RAG L +AY F+ N+P +P+ + +LL
Sbjct: 676 IEEGLKLFQLMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAYAFVKNLPIEPDRSIWLSLL 735
Query: 407 SASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVG 466
+ +H + +G +LL++EP N V + N Y E + ++ +N+R MK G
Sbjct: 736 CSCRVH---HNVELGKLAAHKLLDIEPSRGSNYVQLLNLYGENELQDRAANLRASMKEKG 792
Query: 467 LKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
LKK G SW+E+G SI F+SG S IY +L +L +M+
Sbjct: 793 LKKTPGCSWIEVGNSIDVFFSGDSSSPRTIEIYDLLNSLRRNMR 836
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 143/302 (47%), Gaps = 1/302 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I G+ + ++ V++ K +K ++ L AC + ++ GMQV +
Sbjct: 222 VAWNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCD 281
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ K G ++D Y +L+ Y C+ DA VFD + + WN +I+ V N +
Sbjct: 282 LVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDG 341
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ + +MK L PD T VLS+C +G+ G+ +H +L++R N L +AL+ M
Sbjct: 342 LKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTM 401
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG A +F+ ++ +V W +MI G Q+ EALE +++M P+
Sbjct: 402 YSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIM 461
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
V+ AC V G H + G++ ++ D+ ++ K + +MP
Sbjct: 462 ASVVSACTGLKNVNLGCT-IHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMP 520
Query: 395 FQ 396
+
Sbjct: 521 LK 522
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 141/301 (46%), Gaps = 6/301 (1%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S L CC + + Q+H + G +ND + L+ T+ S L + + V
Sbjct: 261 STLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLL---TMYSKCKLVEDAENVFDQV 317
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+ WN +I Y + R + + ++ MK I P T VL +C + + G
Sbjct: 318 SVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGR 377
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
+ A + K + S+V + L+ Y C DA +F+ + R VV+W +I+ +N
Sbjct: 378 LIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNR 437
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
EA+ ++ M G +PD M V+SACT L N++LG +H I+ G + + +
Sbjct: 438 KYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVAS 497
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
+L+DMY+K + +FS M N+ W+++I ++G + ++ LFS M + P
Sbjct: 498 SLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFP 557
Query: 330 N 330
+
Sbjct: 558 D 558
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 109/236 (46%), Gaps = 9/236 (3%)
Query: 122 RRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN-VTKSGLDSDVYTNNNLVRFYGSCRRK 180
R + T FTYP +LKAC +S L G + + +TK SD Y +L+ FY C
Sbjct: 42 RNPLNATRFTYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSF 101
Query: 181 RDACKVFDDMCE-----RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLV 235
+A KVFD + E + V WN I+ E + F +M+ G PD ++ +
Sbjct: 102 GNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCI 161
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI- 294
+L A G+L K +H + + + L + LI MY CG A LF +E+
Sbjct: 162 LLGASD--GHLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKG 219
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
NV W+ MI G ++G E +LE++ KN ++ +F L AC V G
Sbjct: 220 NVVAWNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFG 275
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 123/260 (47%), Gaps = 4/260 (1%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN+++ GY +E + F M+ G++P ++ +L A L Q+
Sbjct: 124 WNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLGASD--GHLGYAKQIHGYSV 181
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER-SVVSWNVIITVCVENLWLGEAV 215
+ D + + L+ Y SC R DA ++F ++ ++ +VV+WNV+I EN ++
Sbjct: 182 RKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSL 241
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY 275
++ K+ + + LSAC + +S G VH L++ G + + T+L+ MY
Sbjct: 242 EVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMY 301
Query: 276 AKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFL 335
+KC V A +F ++ W+AMI +G + + L+++ MK I P+ +T
Sbjct: 302 SKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTAT 361
Query: 336 GVLCACNHAGMVEDGYRYFH 355
VL +C G + G R H
Sbjct: 362 NVLSSCCLVGSYDFG-RLIH 380
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 151/475 (31%), Positives = 240/475 (50%), Gaps = 39/475 (8%)
Query: 75 SKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPF 134
+ +L AR + V +++ WN +I GY +EA+ + M+ GI+ + TY
Sbjct: 236 NDDLNGAREVFEAMV-ENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTT 294
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSD----VYTNNNLVRFYGSCRRKRDACKVFDDM 190
++ ACA + G QV A + K+ L+ + + +N L+ Y + +A K+F M
Sbjct: 295 IISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAM 354
Query: 191 CERSVVSWN-------------------------------VIITVCVENLWLGEAVGYFV 219
R++++WN V+I+ +N + E + F
Sbjct: 355 PVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFK 414
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+M+ GFEP + L+AC+ LG L G+ +H QL+ G + +G A+I MYAKCG
Sbjct: 415 QMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCG 474
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
V A +F M +++ +W++MI L QHG+ +A+ELF M + P+ +TFL VL
Sbjct: 475 VVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLT 534
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
AC+HAG+VE G YF+ M +GI P HY M D+ RAG A I +MP +P
Sbjct: 535 ACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGA 594
Query: 400 IVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVR 459
V ALL+ IH +G E +L +L P+ V+++N YA+VG W +V+ VR
Sbjct: 595 PVWEALLAGCRIHG---NMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVR 651
Query: 460 RFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ M++ ++K SW+E+ +H F D E+ +Y+ LE L L MK L +
Sbjct: 652 KLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGY 706
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 172/411 (41%), Gaps = 91/411 (22%)
Query: 66 LVRFCTLSSSKNLTYARSILCN---YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKR 122
+ +C L NL R I Y+ DSV +N +I GYA + A+ +F M+R
Sbjct: 86 ITAYCALG---NLELGREIFNGTPLYMRDSVF--YNAMITGYAHNGDGHSALELFRAMRR 140
Query: 123 RGIKPTEFTYPFVLKACAEISGLNEGM--QVQANVTKSGL---DSDVYTNNNLVRFYG-- 175
+P +FT+ VL A G NE Q+ V K+G+ S V N L+ Y
Sbjct: 141 DDFRPDDFTFTSVLSALVLFVG-NEQQCGQMHCAVVKTGMGCVSSSVL--NALLSVYVKR 197
Query: 176 ------SCRRKRDACKVFDDMCERSVVSWNVIIT----------------VCVENL---W 210
SC A K+FD+M +R ++W +IT VENL W
Sbjct: 198 ASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAW 257
Query: 211 ------------LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
EA+ KM+ LG + D+ T ++SAC +G+ +GK VH +++
Sbjct: 258 NAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILK 317
Query: 259 RGTVLN----CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA------------- 301
N + ALI +Y K V AR +F M N+ TW+A
Sbjct: 318 NELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEE 377
Query: 302 ------------------MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
MI GLAQ+G+ +E L+LF M+ P F G L AC+
Sbjct: 378 AKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSV 437
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
G +E+G + ++ H+ + + + M + A+ G ++ A + + MP
Sbjct: 438 LGALENGRQLHAQLVHLGYESSLSVG-NAMISMYAKCGVVEAAESVFVTMP 487
>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Brachypodium distachyon]
Length = 757
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/416 (34%), Positives = 225/416 (54%), Gaps = 4/416 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN++I + EA+ + +M+ G++P T +L AC + G + +
Sbjct: 311 VSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSY 370
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ K GLD DV N+L+ Y C A VF + +R VV+WN I+T CV++ L
Sbjct: 371 LVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTACVQHQHLEVV 430
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
F ++ D ++ VLSA ELG + K VH + G V + L LID
Sbjct: 431 FKLFNLLQRSLPSLDRISLNNVLSASAELGYFEMVKQVHTCTFKVGLVNDTMLSNGLIDT 490
Query: 275 YAKCGAVGCARLLFSRM-EEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
YAKCG++ A LF M +V++WS++I+G AQ GY +AL+LF+ M+N + PN+VT
Sbjct: 491 YAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMRNLGVRPNHVT 550
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
F+GVL AC+ G+V++G Y+ ME HG+ P R H + D+LARAG L EA F+ M
Sbjct: 551 FVGVLTACSRVGLVDEGCYYYSIMEPEHGVLPTREHCSCVIDLLARAGRLTEAAKFVDQM 610
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
PF+P+ ++ + LL+ S H+ +G +L ++P S V++ N Y+ G W
Sbjct: 611 PFEPDIVMWKTLLAGSKTHN---DVEMGRRAAEGILNIDPSHSAAYVLLCNIYSASGDWN 667
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
+ + +++ M++ G+KK G SWV+L G + F S E IY +LE + + M
Sbjct: 668 EFARLKKAMRSSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYTMLELVGMEM 723
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 129/263 (49%), Gaps = 2/263 (0%)
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
P+ W ++I +A + R +A+ +F M R G P +F ++ACAE+ + G QV A
Sbjct: 107 PVSWASVIAAHAQNRRSTDALGLFSSMLRSGTAPDQFALGSTVRACAELGDIGVGRQVHA 166
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
KS SD+ N LV Y D +F M E+ +SW II + E
Sbjct: 167 QAMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCEME 226
Query: 214 AVGYFVKMKDLGF-EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
A+ F +M G P+E V SAC LG+L G+ +H ++ N G +L
Sbjct: 227 ALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNSYAGCSLS 286
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
DMYA+C + A+ +F ++ ++ +W+++I + G EA+ L S M+ S + P+ +
Sbjct: 287 DMYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPDGI 346
Query: 333 TFLGVLCACNHAGMVEDGYRYFH 355
T G+LCAC ++ G R H
Sbjct: 347 TVRGLLCACVGCDAIQHG-RLMH 368
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 28/420 (6%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HAQ S +D + LV T+ S L +L + + PI W ++I G+A
Sbjct: 163 QVHAQAMKSENGSDLIVQNALV---TMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFA 219
Query: 106 WSDRPREAVWVFIDMKRRGIK-PTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDV 164
EA+ +F +M G+ P EF + V AC + L G Q+ + K LD +
Sbjct: 220 QQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNS 279
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL 224
Y +L Y C++ A +VF + +VSWN II C L EA+ +M+
Sbjct: 280 YAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGS 339
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCA 284
G PD T+ +L AC + G+ +H L++ G + + +L+ MYA+C A
Sbjct: 340 GLRPDGITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSSA 399
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA 344
+F + +V TW++++ QH + E +LF+ ++ S S + ++ VL A
Sbjct: 400 MDVFHETRDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPSLDRISLNNVLSASAEL 459
Query: 345 GMVEDGYRYFHEMEHVH------GIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
G YF ++ VH G+ + + + D A+ G L +A M +
Sbjct: 460 G-------YFEMVKQVHTCTFKVGLVNDTMLSNGLIDTYAKCGSLDDAVKLFEMMGTNSD 512
Query: 399 PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
+ S SS+ Q G R+ L+L R +NL + N VG+ S V
Sbjct: 513 ------VFSWSSLIVGYAQSG----YPRKALDLFAR-MRNLGVRPNHVTFVGVLTACSRV 561
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 126/254 (49%), Gaps = 19/254 (7%)
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
NN+L+ YG C A VFD+M ++ VSW +I +N +A+G F M G
Sbjct: 79 NNHLITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNRRSTDALGLFSSMLRSGT 138
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLI--ERGTVLNCQLGTALIDMYAKCGAVGCA 284
PD+ + + AC ELG++ +G+ VH Q + E G+ L Q AL+ MY+K G V
Sbjct: 139 APDQFALGSTVRACAELGDIGVGRQVHAQAMKSENGSDLIVQ--NALVTMYSKSGLVADG 196
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI-SPNYVTFLGVLCACNH 343
LLF RM E + +W ++I G AQ G EAL++F M + PN F V AC
Sbjct: 197 FLLFGRMREKDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSACGV 256
Query: 344 AGMVEDGYRYFHEMEHVHGIK-PMRIHYH-----TMADILARAGHLKEAYTFIMNMPFQP 397
G +E G E +H + R+ ++ +++D+ AR L+ A + P
Sbjct: 257 LGSLEYG-------EQIHSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYGID-AP 308
Query: 398 NPIVLRALLSASSI 411
+ + ++++A S+
Sbjct: 309 DLVSWNSIINACSV 322
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 156/467 (33%), Positives = 236/467 (50%), Gaps = 9/467 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIHA + +GL ++A I +V L A+ + + + P+ W L+ GY
Sbjct: 203 QIHAHVIRAGLCSNASIETGIVNMYV--KCGWLVGAKRVF-DQMAVKKPVAWTGLMVGYT 259
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ R R+A+ +F+D+ G++ F + VLKACA + L G Q+ A V K GL+ +V
Sbjct: 260 QAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVS 319
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL- 224
LV FY C AC+ F ++ E + VSW+ II+ + EAV F ++
Sbjct: 320 VGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKN 379
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG-TALIDMYAKCGAVGC 283
+ T + AC+ L + ++G VH I+R +++ Q G +ALI MY+KCG +
Sbjct: 380 AVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKR-SLIGSQYGESALITMYSKCGCLDD 438
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A +F M+ ++ W+A I G A +G A EAL LF M + + PN VTF+ VL AC+H
Sbjct: 439 AHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSH 498
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
AG+VE G Y M + + P HY M DI AR+G L EA F+ NMPF+P+ + +
Sbjct: 499 AGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWK 558
Query: 404 ALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMK 463
LS H + E L +L+P + V+ N Y G WE+ + V + M
Sbjct: 559 CFLSGCWTHKNLELGKIAGE---ELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEVMKLMN 615
Query: 464 NVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
LKK SW++ G IHRF G + IY+ L+ + M+
Sbjct: 616 ERMLKKELSCSWIQEKGKIHRFIVGDKHHPQSQEIYEKLKEFDGFME 662
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 189/462 (40%), Gaps = 55/462 (11%)
Query: 55 GLQNDAQILKELV--RFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPRE 112
G++N + +L+ V +C S ++ L + ++D + +I YA +
Sbjct: 110 GIENPSVLLQNCVLQMYCECGSLEDADK----LFDEMSDLNAVSRTTMISAYAEQGLLDK 165
Query: 113 AVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVR 172
AV +F M G KP Y +LK+ L+ G Q+ A+V ++GL S+ +V
Sbjct: 166 AVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVN 225
Query: 173 FYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETT 232
Y C A +VFD M + V+W ++ + +A+ FV + G E D
Sbjct: 226 MYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFV 285
Query: 233 MLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME 292
VVL AC L L GK +H + + G +GT L+D Y KC + A F +
Sbjct: 286 FSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIR 345
Query: 293 EINVWTWSAMILGLAQHGYAEEALELFSNMKN-SSISPNYVTFLGVLCACN--------- 342
E N +WSA+I G Q EEA++ F ++++ +++ N T+ + AC+
Sbjct: 346 EPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGG 405
Query: 343 --HA------------------------GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
HA G ++D + F M++ P + +
Sbjct: 406 QVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDN-----PDIVAWTAFISG 460
Query: 377 LARAGHLKEAYTFIMNM---PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP 433
A G+ EA M +PN + A+L+A S Q + R + P
Sbjct: 461 HAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAP 520
Query: 434 RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSW 475
++ + YA G+ ++ RFMKN+ + MSW
Sbjct: 521 TIDHYDCMI-DIYARSGLLDE---ALRFMKNMPFEP-DAMSW 557
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 114/230 (49%)
Query: 112 EAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLV 171
EA F +M + G+ + ++Y + +AC E+ L+ G + + + V N ++
Sbjct: 64 EAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSVLLQNCVL 123
Query: 172 RFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDET 231
+ Y C DA K+FD+M + + VS +I+ E L +AVG F +M + G +P +
Sbjct: 124 QMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSS 183
Query: 232 TMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM 291
+L + L +G+ +H +I G N + T +++MY KCG + A+ +F +M
Sbjct: 184 MYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQM 243
Query: 292 EEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
W+ +++G Q G A +AL+LF ++ + + F VL AC
Sbjct: 244 AVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKAC 293
>gi|226529055|ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 156/446 (34%), Positives = 233/446 (52%), Gaps = 35/446 (7%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN++I GYA + REA +F +M+R+G EFT +L AC++ L G V
Sbjct: 112 VSWNSMIGGYAQAGDTREACALFGEMRRQGFLGDEFTLASLLLACSQEGNLEFGRLVHCL 171
Query: 155 VTKSGLDSDVYTNNNLVRFYGSC------RR------------------------KRDAC 184
+ SG D+ LV Y C RR DA
Sbjct: 172 MLVSGSPVDLILGGALVDMYSKCGDLCMARRCFEMMPIKSVVSWTSMLCAQTKHGSVDAA 231
Query: 185 KV-FDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
+ FD M ER+ VSWN +I+ V+ EA+ + +M+ G PDE T++ VLSAC +
Sbjct: 232 RCWFDHMPERNTVSWNTMISCYVQRGQYHEALDLYKQMQSHGPAPDEATLVPVLSACGRI 291
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
G+L++GK VHL + + + L +L+DMYAKCG V A LF M NV +W+ +I
Sbjct: 292 GDLTVGKMVHLYIRDNIHNPDISLINSLLDMYAKCGQVDTAIRLFREMCNRNVVSWNVII 351
Query: 304 LGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
GLA HG A +A+ F +M ++ SP+ +TF+ +L +C+H G++E G YF M HV+ +
Sbjct: 352 GGLAMHGRALDAITFFRSMVRNT-SPDGITFVALLSSCSHGGLLETGQHYFESMRHVYNV 410
Query: 364 KPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNE 423
K HY M D+L R GHL++A I MP +P+ +V ALL A IH +G +
Sbjct: 411 KHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHG---NVKIGKQ 467
Query: 424 VRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIH 483
V ++LLELE V+++N E WE + +R+ MK G +K G+S +E+ SIH
Sbjct: 468 VIKQLLELEGISGGLFVLISNLLYETNQWEDMKRLRKLMKERGTRKDMGVSSIEINNSIH 527
Query: 484 RFYSGYDSQVELAGIYQILETLNLHM 509
F + IY +++ L+ H+
Sbjct: 528 EFGVEDIRHESSSEIYAVVDQLSYHL 553
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 157/335 (46%), Gaps = 34/335 (10%)
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
D + +N + R Y SD PREA+ + M RRG+ P EFT PFV+KAC + +
Sbjct: 7 DPDRVMYNTITRAYCNSDCPREALRLHRCMLRRGVLPNEFTLPFVVKACTRAQAWDNALA 66
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
V K G V+ N L+ Y S D+ + FD+M R+VVSWN +I +
Sbjct: 67 VHGVALKLGFVGQVFVANALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIGGYAQAGD 126
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
EA F +M+ GF DE T+ +L AC++ GNL G+ VH ++ G+ ++ LG A
Sbjct: 127 TREACALFGEMRRQGFLGDEFTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGA 186
Query: 271 LIDMYAKC-------------------------------GAVGCARLLFSRMEEINVWTW 299
L+DMY+KC G+V AR F M E N +W
Sbjct: 187 LVDMYSKCGDLCMARRCFEMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSW 246
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR-YFHEME 358
+ MI Q G EAL+L+ M++ +P+ T + VL AC G + G + + +
Sbjct: 247 NTMISCYVQRGQYHEALDLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIRD 306
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
++H P +++ D+ A+ G + A M
Sbjct: 307 NIH--NPDISLINSLLDMYAKCGQVDTAIRLFREM 339
>gi|449506393|ref|XP_004162737.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77170-like [Cucumis sativus]
Length = 614
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 151/421 (35%), Positives = 222/421 (52%), Gaps = 8/421 (1%)
Query: 58 NDAQILKELVRFCTLSSSKNLTYARSILCNYV-NDSVPIPWNNLIRGYAWSDRPREAVWV 116
+ A+I+ L+ CT +A + N + N WN +IR Y + PR A++V
Sbjct: 192 DHARIVATLLMNCTNVLELYQIHAHVLRTNMLENHPSSFYWNIIIRSYTRLEVPRIALFV 251
Query: 117 FIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGS 176
+I M + GI P +T P V KA + + G+Q+ + + G + D Y+ + L+ Y
Sbjct: 252 YIAMLQAGILPDCYTLPIVFKALSLAYAFDLGLQLHSVAIRLGFEFDQYSESGLISLYSK 311
Query: 177 CRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVV 236
ACKVF+ R + SWN II + EAV F+K++ G EPD+ T++ V
Sbjct: 312 IGDLECACKVFEQNHNRKLGSWNAIIAGLSQGGRAKEAVNMFIKLRQSGLEPDDFTIVSV 371
Query: 237 LSACTELGNLSLGKWVH---LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEE 293
SAC LGNL L +H Q+ G N + +LIDMY KCG + A +FS M
Sbjct: 372 TSACGSLGNLELSLQMHKFVFQVKVTGKS-NILMLNSLIDMYGKCGRMDLAMKVFSNMGH 430
Query: 294 INVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRY 353
NV +W+++I+G A HG ++ALE F M+ + + PN VTF+GVL AC H GM+ +G Y
Sbjct: 431 RNVSSWTSLIVGYAMHGQVKQALENFQFMREAGVPPNQVTFVGVLSACVHGGMINEGKHY 490
Query: 354 FHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHD 413
F M++V+G KP HY M D+L++AG L+EA I MP + N I+ L+ H
Sbjct: 491 FDMMKNVYGFKPQLPHYGCMVDLLSKAGLLEEARRMIEEMPMKANSIIWGCLIGGCEKHG 550
Query: 414 AKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGM 473
+G + L ELEP V+++N YA GMW++ +R MK L K+ G
Sbjct: 551 ---NVEIGEWAGKHLQELEPWNDGVYVVLSNIYATNGMWKEAQKMRDVMKQRQLAKVPGY 607
Query: 474 S 474
S
Sbjct: 608 S 608
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 158/429 (36%), Positives = 239/429 (55%), Gaps = 24/429 (5%)
Query: 84 ILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS 143
+LC N N I+GY + R +A VF M RR ++ ++ A
Sbjct: 43 LLCTRTN-------NAFIQGYCSAGRVTDARRVFDGMPRR----DTVSFNSMIHGYAVSG 91
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
+ ++ V L T ++V + A +VF++M ER +VSWN +I+
Sbjct: 92 DVGSAQRLFERV----LAPTPVTWTSMVAGFCRAGDVESARRVFEEMPERDLVSWNAMIS 147
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
CV N EA+ F M + GF P+ T++ VLSACT G L GKWVH+ + ++
Sbjct: 148 GCVGNRLPVEALCLFRWMMEEGFVPNRGTVVSVLSACTGAGALETGKWVHVFVEKKRLRW 207
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
+ LGTAL+DMYAKCGAV A +F+ + N TW+AMI GLA +GY+ +AL++F M+
Sbjct: 208 DEFLGTALVDMYAKCGAVELALEVFTGLRARNTCTWNAMINGLAMNGYSAKALDMFRQME 267
Query: 324 -NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGH 382
N +++P+ VTF+GVL AC+HAG V+ G +F+ + +G++ + HY M D+LAR+GH
Sbjct: 268 LNGTVAPDEVTFVGVLLACSHAGFVDAGKEHFYTIPQKYGVELILEHYACMVDLLARSGH 327
Query: 383 LKEAYTFIMNMPFQPNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVI 441
L+EA+ I MP +P+ +V RALL +H + K + V + E+E S + V+
Sbjct: 328 LQEAHKLITEMPMKPDVVVWRALLGGCRLHKNVKMAENV-------ISEMEATCSGDHVL 380
Query: 442 VANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQI 501
++N YA VG W V +VRR M++ G++K+ G S VE+ GSIH F SG S I+
Sbjct: 381 LSNLYAAVGRWNGVEDVRRTMRSKGIEKIPGCSSVEMDGSIHEFISGDKSHPSYDDIHAK 440
Query: 502 LETLNLHMK 510
L + M+
Sbjct: 441 LIEIGGRMQ 449
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/419 (33%), Positives = 224/419 (53%), Gaps = 3/419 (0%)
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
D I W ++ G + EA+ VF M+ G+ ++T+ +L AC ++ L EG Q
Sbjct: 240 DRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQ 299
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+ A +T++ + +V+ + LV Y CR R A VF M R+++SW +I +N
Sbjct: 300 IHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNAC 359
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
EAV F +M+ G +PD+ T+ V+S+C L +L G H + G + + A
Sbjct: 360 SEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNA 419
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
L+ +Y KCG++ A LF M + +W+A++ G AQ G A+E ++LF M + + P+
Sbjct: 420 LVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPD 479
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
VTF+GVL AC+ AG+VE G YF M+ HGI P+ HY M D+ +R+G KEA FI
Sbjct: 480 GVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFI 539
Query: 391 MNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVG 450
MP P+ LLS+ + + +G LLE +P+ + V++ + +A G
Sbjct: 540 KQMPHSPDAFGWATLLSSCRL---RGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKG 596
Query: 451 MWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
W +V+++RR M++ +KK G SW++ +H F + S + IY+ LE LN M
Sbjct: 597 QWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKM 655
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 152/334 (45%), Gaps = 33/334 (9%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRR-GIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ +N LI G++ + P +V ++ + R ++PT T ++ + +S G V
Sbjct: 111 VSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHC 170
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDA------------------------CKVFDD 189
V + G + + + LV Y RDA CK+ +D
Sbjct: 171 QVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIED 230
Query: 190 -------MCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
M +R ++W ++T +N EA+ F +M+ G D+ T +L+AC
Sbjct: 231 AKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGA 290
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
L L GK +H + N +G+AL+DMY+KC ++ A +F RM N+ +W+AM
Sbjct: 291 LAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAM 350
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
I+G Q+ +EEA+ FS M+ I P+ T V+ +C + +E+G + FH + V G
Sbjct: 351 IVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ-FHCLALVSG 409
Query: 363 IKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
+ + + + + G +++A+ M F
Sbjct: 410 LMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH 443
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG-YFV 219
D +++T N L+ R D ++F M ER VS+N +IT +V Y
Sbjct: 76 DPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRA 135
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+++ P T+ ++ + L + +LG VH Q++ G +G+ L+DMYAK G
Sbjct: 136 LLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMG 195
Query: 280 AVGCARLLFSRMEEINV-------------------------------WTWSAMILGLAQ 308
+ AR +F ME V TW+ M+ GL Q
Sbjct: 196 LIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQ 255
Query: 309 HGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
+G EAL++F M+ + + TF +L AC +E+G
Sbjct: 256 NGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEG 297
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 145/447 (32%), Positives = 233/447 (52%), Gaps = 34/447 (7%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN LI GY +A++V+ M+ G+KP + T ++ +C+ + LN G +
Sbjct: 223 VSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY 282
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT----------- 203
V ++GL + N L+ + C +A ++FD++ +R++VSW +I+
Sbjct: 283 VKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVS 342
Query: 204 -----------VCVENLWLG---------EAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
V + N +G +A+ F +M+ +PDE TM+ LSAC++L
Sbjct: 343 RKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQL 402
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
G L +G W+H + + LN LGT+L+DMYAKCG + A +F ++ N T++A+I
Sbjct: 403 GALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAII 462
Query: 304 LGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
GLA HG A A+ F+ M ++ I+P+ +TF+G+L AC H GM++ G YF +M+ +
Sbjct: 463 GGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNL 522
Query: 364 KPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNE 423
P HY M D+L RAG L+EA + +MP + + V ALL +H +G +
Sbjct: 523 NPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHG---NVELGEK 579
Query: 424 VRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIH 483
++LLEL+P S V++ Y E MWE RR M G++K+ G S +E+ G +
Sbjct: 580 AAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVC 639
Query: 484 RFYSGYDSQVELAGIYQILETLNLHMK 510
F S+ E IY L L HM+
Sbjct: 640 EFIVRDKSRPESEKIYDRLHCLGRHMR 666
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 203/415 (48%), Gaps = 37/415 (8%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LS L+ C HL QI AQ+ ++GL D L+ FC LS S+ L Y+ IL N
Sbjct: 57 LSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENP 116
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGI---KPTEFTYPFVLKACAEISGLNEG 148
++ WN IRG++ S+ P+E+ ++ M R G +P FTYP + K CA++ + G
Sbjct: 117 NI-FSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
+ +V K L+ + +N + + SC +A KVFD+ R +VSWN +I +
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKI 235
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+A+ + M+ G +PD+ TM+ ++S+C+ LG+L+ GK + + E G + L
Sbjct: 236 GEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV 295
Query: 269 TALIDM-------------------------------YAKCGAVGCARLLFSRMEEINVW 297
AL+DM YA+CG + +R LF MEE +V
Sbjct: 296 NALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 355
Query: 298 TWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM 357
W+AMI G Q ++AL LF M+ S+ P+ +T + L AC+ G ++ G + H
Sbjct: 356 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGI-WIHRY 414
Query: 358 EHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
+ + ++ D+ A+ G++ EA + + + N + A++ ++H
Sbjct: 415 IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALH 468
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 143/420 (34%), Positives = 220/420 (52%), Gaps = 5/420 (1%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN I RPREA+ FI+ +R P T+ L AC++ LN GMQ+ V
Sbjct: 177 WNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVL 236
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
+SG D+DV N L+ FYG C++ R + +F +M ++ VSW ++ V+N +A
Sbjct: 237 RSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASV 296
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
+++ + E + + VLSAC + L LG+ +H ++ +G+AL+DMY
Sbjct: 297 LYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYG 356
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM--KNSSISPNYVTF 334
KCG + + F M E N+ T +++I G A G + AL LF M + +PNY+TF
Sbjct: 357 KCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTF 416
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ +L AC+ AG VE+G + F M +GI+P HY + D+L RAG ++ AY FI MP
Sbjct: 417 VSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMP 476
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
QP V AL +A +H K Q +G L +L+P+ S N V+++N +A G W +
Sbjct: 477 IQPTISVWGALQNACRMH-GKPQ--LGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAE 533
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ VR +K VG+KK G SW+ + +H F + S + I L L M+ +
Sbjct: 534 ANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGY 593
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 128/270 (47%), Gaps = 5/270 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +LI G A + A+ F +M+R G+ P +FT+P KA A + G Q+ A
Sbjct: 74 VSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHAL 133
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K G DV+ + Y R + DA K+FD++ ER++ +WN I+ V + EA
Sbjct: 134 AVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREA 193
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F++ + + P+ T L+AC++ +L+LG +H ++ G + + LID
Sbjct: 194 IEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDF 253
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y KC + + ++F+ M N +W +++ Q+ E+A L+ + + +
Sbjct: 254 YGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMI 313
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIK 364
VL AC +E G H H +K
Sbjct: 314 SSVLSACAGMAGLELGRSI-----HAHAVK 338
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 130/300 (43%), Gaps = 16/300 (5%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILC 86
+FL C HL Q+H + SG D + L+ F C S + +
Sbjct: 214 AFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK 273
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
N V+ W +L+ Y + +A +++ ++ ++ ++F VL ACA ++GL
Sbjct: 274 NAVS------WCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLE 327
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G + A+ K+ ++ ++ + LV YG C D+ + FD+M E+++V+ N +I
Sbjct: 328 LGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYA 387
Query: 207 ENLWLGEAVGYFVKM--KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER-GTVL 263
+ A+ F +M + G P+ T + +LSAC+ G + G + + G
Sbjct: 388 HQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEP 447
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEALELFSNM 322
+ + ++DM + G V A +M + + W A+ HG + L N+
Sbjct: 448 GAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENL 507
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 91/211 (43%), Gaps = 3/211 (1%)
Query: 134 FVLKACAEISGLNEGMQVQANVTKSGLDSDV--YTNNNLVRFYGSCRRKRDACKVFDDMC 191
+LK S + G V A + K+ LDS + N L+ Y A V
Sbjct: 11 LLLKNAISASSMRLGRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARLVLRLTP 69
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
R+VVSW +I+ +N A+ F +M+ G P++ T A L GK
Sbjct: 70 ARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQ 129
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+H ++ G +L+ +G + DMY K AR LF + E N+ TW+A I G
Sbjct: 130 IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR 189
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACN 342
EA+E F + PN +TF L AC+
Sbjct: 190 PREAIEAFIEFRRIDGHPNSITFCAFLNACS 220
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/393 (33%), Positives = 211/393 (53%), Gaps = 3/393 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN+LI G +A+ F M+ R +K E+T P VL + A + + + V
Sbjct: 7 VSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCL 66
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ K+G ++ NN L+ Y + A VF M ++ VVSW ++T N EA
Sbjct: 67 IIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEA 126
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F KM+ G PD+ + VLSAC EL + G+ +H L++ G + + +L+ M
Sbjct: 127 IKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTM 186
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG++ A F M +V +W+A+I+G AQ+G + +L+ + M + P+Y+TF
Sbjct: 187 YAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITF 246
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+G+L AC+H G++ G YF M+ V+GIKP HY M D+L R+G L EA + M
Sbjct: 247 IGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMV 306
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
P+ +V +ALL+A +H + +G + L ELEP S V+++N Y+ G WE
Sbjct: 307 VAPDAVVWKALLAACRVHK---ELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWED 363
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYS 487
+ +RR M++ G+ K G SW+E + F S
Sbjct: 364 AARIRRLMRSRGICKEPGYSWIETNSKVSTFMS 396
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 113/222 (50%), Gaps = 4/222 (1%)
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
D + W +L+ GY+ + EA+ +F M+ G+ P + VL ACAE++ ++ G Q
Sbjct: 104 DKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQ 163
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+ A + KSGL+S + +N+LV Y C DA + FD+M R V+SW +I +N
Sbjct: 164 IHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGR 223
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER--GTVLNCQLG 268
++ ++ +M G +PD T + +L AC+ G L G+ + + +++ G +
Sbjct: 224 GKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGR-AYFEAMDKVYGIKPGPEHY 282
Query: 269 TALIDMYAKCGAVGCARLLFSRM-EEINVWTWSAMILGLAQH 309
+ID+ + G + A+ L ++M + W A++ H
Sbjct: 283 ACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLAACRVH 324
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 17/110 (15%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYAR--SIL-CNYVNDSVP----IPWN 98
QIHA + SGL++ + LV YA+ SI+ N D++P I W
Sbjct: 163 QIHATLVKSGLESSLSVDNSLVTM----------YAKCGSIVDANRAFDNMPTRDVISWT 212
Query: 99 NLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
LI GYA + R + ++ + M G KP T+ +L AC+ L G
Sbjct: 213 ALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSG 262
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/415 (34%), Positives = 221/415 (53%), Gaps = 6/415 (1%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
W +LI GYA +D P EA+ + + M R KP FT+ +LKA + G Q+ A
Sbjct: 9 WTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTV 68
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
K DVY + L+ Y C R A VFD + ++ VSWN +I +
Sbjct: 69 KYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLL 128
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F +M+ GFE T V SA +G L GKWVH +I+ G L+ +G ++DMYA
Sbjct: 129 MFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYA 188
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
K G++ AR +F +++ ++ TW++M+ AQ+G EA+ F M+ + N +TFL
Sbjct: 189 KSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLS 248
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
+L AC+H G+V++G +YF M+ H ++P HY T+ D+L RAG L +A FI MP +
Sbjct: 249 ILTACSHGGLVKEGKQYFDMMKE-HNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMK 307
Query: 397 PNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKV 455
P V ALL + +H +AK +G + EL+P + V++ N YA G W+
Sbjct: 308 PTAAVWGALLGSCRMHKNAK----IGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAA 363
Query: 456 SNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+ VR+ MK G+KK SWVE+ S+H F + D+ IY+ E +++ ++
Sbjct: 364 ARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIR 418
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 1/220 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN LI G+A + +F +M+R G + T FTY V A A I L +G V A+
Sbjct: 108 VSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAH 167
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ KSG + N ++ Y DA KVFD + ++ +V+WN ++T + EA
Sbjct: 168 MIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREA 227
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
V +F +M+ G ++ T L +L+AC+ G + GK + E ++D+
Sbjct: 228 VTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDL 287
Query: 275 YAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAE 313
+ G + A + +M + W A++ H A+
Sbjct: 288 LGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAK 327
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 115/246 (46%), Gaps = 8/246 (3%)
Query: 190 MCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
M R + SW +I +N EA+G + M F+P+ T +L A + +G
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
+ +H ++ + +G+AL+DMYA+CG + A +F ++E N +W+A+I G A+
Sbjct: 61 EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIH 369
G E L +F+ M+ + + T+ V A G +E G ++ H G +
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQG-KWVHAHMIKSGERLSAFV 179
Query: 370 YHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLL 429
+T+ D+ A++G + +A + + + L++ +S+ A Q G+G E
Sbjct: 180 GNTILDMYAKSGSMIDARKVF-------DHVDKKDLVTWNSMLTAFAQYGLGREAVTHFE 232
Query: 430 ELEPRG 435
E+ G
Sbjct: 233 EMRKCG 238
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 83/192 (43%), Gaps = 6/192 (3%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+HA + SG + A + ++ S S + AR + ++V+ + WN+++ +A
Sbjct: 164 VHAHMIKSGERLSAFVGNTILDMYAKSGS--MIDARKVF-DHVDKKDLVTWNSMLTAFAQ 220
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
REAV F +M++ G+ + T+ +L AC+ + EG Q + + L+ ++
Sbjct: 221 YGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDH 280
Query: 167 NNNLVRFYGSCRRKRDACK-VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
+V G DA +F + + W ++ C + +G F
Sbjct: 281 YVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSC--RMHKNAKIGQFAADHVFE 338
Query: 226 FEPDETTMLVVL 237
+PD+T V+L
Sbjct: 339 LDPDDTGPPVLL 350
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 168/524 (32%), Positives = 256/524 (48%), Gaps = 47/524 (8%)
Query: 15 PKP---SNCNSDLLSK--ARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRF 69
PKP SN N L +Q +S L+ + IHAQ+ +G D ++ EL+R
Sbjct: 31 PKPHPNSNSNPKSLKSLDQKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRS 90
Query: 70 CTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTE 129
C S + YA I Y ++ + LI G+ S EA+ ++ M I P
Sbjct: 91 C--SKCHAIDYASRIF-QYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDN 147
Query: 130 FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD 189
+ +LKAC L EG +V + K G S+ ++ YG C DA +VF++
Sbjct: 148 YLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEE 207
Query: 190 MCE------------------------------RSVVSWNVIITVCVENLWLGEAVGYFV 219
M E + V W +I V N A+ F
Sbjct: 208 MPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFR 267
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
M+ P+E T++ VLSAC++LG L +G+WVH + + LN +G ALI+MY++CG
Sbjct: 268 GMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCG 327
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
++ A+ +F M++ +V T++ MI GL+ +G + +A+ELF M + P VTF+GVL
Sbjct: 328 SIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLN 387
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
AC+H G+V+ G+ FH M + ++P HY M D+L R G L+EAY I M P+
Sbjct: 388 ACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDH 447
Query: 400 IVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG---SQNLVIVANKYAEVGMWEKVS 456
I+L LLSA +H +G +V + ELE RG S V++++ YA G W++ +
Sbjct: 448 IMLGTLLSACKMHK---NLELGEQVAK---ELEDRGQADSGTYVLLSHVYASSGKWKEAA 501
Query: 457 NVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQ 500
VR MK G++K G S +E+ IH F G + IY+
Sbjct: 502 QVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYE 545
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/412 (33%), Positives = 223/412 (54%), Gaps = 3/412 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W LI Y AV F M++ + P ++T+ V+ ACA ++ G Q+ +
Sbjct: 325 VSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGH 384
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V + GL + N++V Y + A VF + + ++SW+ II V + + EA
Sbjct: 385 VLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEA 444
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
Y M+ G +P+E + VLS C + L GK VH ++ G + +ALI M
Sbjct: 445 FDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISM 504
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG+V A +F+ M+ N+ +W+AMI G A+HGY++EA+ LF + + + P+YVTF
Sbjct: 505 YSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTF 564
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+GVL AC+HAGMV+ G+ YF M + + I P + HY + D+L RAG L EA I +MP
Sbjct: 565 IGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMP 624
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
+ +V LL + +H + G +LL L+P + + +AN YA G W++
Sbjct: 625 CYTDDVVWSTLLRSCRVHGDVDR---GRWTAEQLLRLDPNSAGTHIALANIYAAKGRWKE 681
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
+++R+ MK+ G+ K +G SWV + ++ F +G + + I +LE L+
Sbjct: 682 AAHIRKLMKSKGVIKERGWSWVNVNDKLNAFVAGDQAHPQSEHITTVLELLS 733
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 128/269 (47%), Gaps = 8/269 (2%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
I W LI GY + EA+ +F +M + G++ +F LKAC + G +
Sbjct: 122 ISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVALKACGLGVNICFGELLHG 181
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
KSGL + V+ ++ L+ Y + C+VF M +R+VVSW II V + E
Sbjct: 182 FSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNME 241
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
A+ YF +M D T + L A + L GK +H Q I++G + + L
Sbjct: 242 ALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLAT 301
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MY KCG LF +M+ +V +W+ +I Q G E A+E F M+ S++SPN T
Sbjct: 302 MYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYT 361
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
F V+ AC + + + G E +HG
Sbjct: 362 FAAVISACANLAIAKWG-------EQIHG 383
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 140/322 (43%), Gaps = 10/322 (3%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +I G + EA+ F +M + T+ LKA A+ S L+ G +
Sbjct: 224 VSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQ 283
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K G D + N L Y C + ++F+ M VVSW +IT V+ A
Sbjct: 284 TIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHA 343
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
V F +M+ P++ T V+SAC L G+ +H ++ G V + +++ +
Sbjct: 344 VEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTL 403
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+K G + A L+F + ++ +WS +I +Q GYA+EA + S M+ PN
Sbjct: 404 YSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFAL 463
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVH----GIKPMRIHYHTMADILARAGHLKEAYTFI 390
VL C ++E G + H H GI + + + + ++ G ++EA
Sbjct: 464 SSVLSVCGSMALLEQGKQV-----HAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIF 518
Query: 391 MNMPFQPNPIVLRALLSASSIH 412
M N I A+++ + H
Sbjct: 519 NGMKIN-NIISWTAMINGYAEH 539
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 132/292 (45%), Gaps = 12/292 (4%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIH + GL + + +V TL S L + S++ + + I W+ +I Y+
Sbjct: 380 QIHGHVLRLGLVDALSVANSIV---TLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYS 436
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+EA M+R G KP EF VL C ++ L +G QV A+V G+D +
Sbjct: 437 QGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAM 496
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
++ L+ Y C +A K+F+ M +++SW +I E+ + EA+ F K+ +G
Sbjct: 497 VHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVG 556
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA-LIDMYAKCGAVGCA 284
+PD T + VL+AC+ G + LG + + + + + +ID+ + G + A
Sbjct: 557 LKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEA 616
Query: 285 RLLFSRME-EINVWTWSAMILGLAQHG-------YAEEALELFSNMKNSSIS 328
+ M + WS ++ HG AE+ L L N + I+
Sbjct: 617 EHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRLDPNSAGTHIA 668
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 115/262 (43%), Gaps = 17/262 (6%)
Query: 127 PTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCR---RKRDA 183
P ++ P C E+ + + Q Q L + Y+ +N++ + ++
Sbjct: 56 PLTYSSPGTATECREL--IQQAKQEQ-------LAQNAYSVHNMLELNSELKQLVKQGQL 106
Query: 184 CK---VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM-KDLGFEPDETTMLVVLSA 239
CK +FD M R +SW +I V EA+ F M G + D+ + V L A
Sbjct: 107 CKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVALKA 166
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C N+ G+ +H ++ G + + + +ALIDMY K G + +F +M + NV +W
Sbjct: 167 CGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSW 226
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+A+I GL GY EAL FS M S + + TF L A + ++ G + H
Sbjct: 227 TAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHG-KAIHTQTI 285
Query: 360 VHGIKPMRIHYHTMADILARAG 381
G +T+A + + G
Sbjct: 286 KQGFDESSFVINTLATMYNKCG 307
>gi|255560101|ref|XP_002521068.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539637|gb|EEF41219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 579
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 136/416 (32%), Positives = 232/416 (55%), Gaps = 4/416 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +I G+A S RP +A+ ++ M++ + +++AC + G+ V +
Sbjct: 151 VSWTTMITGFAQSGRPLDAIDIYRTMQKERTEGDGVVMVGLIQACTSLGDSKFGLSVHGH 210
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ + ++ D +L+ Y + A +VF+ + +SV+SW +I+ +N + +
Sbjct: 211 MVRREMNMDNVLQTSLIDMYAKNGKLELASRVFEGIPYKSVISWGALISGFAQNGFANKT 270
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ V+M++ GF+PD +++ LSAC ++GNL +GK +H +++R L+ GTALIDM
Sbjct: 271 LASLVEMQNSGFKPDLVSLISSLSACAQVGNLKVGKSLHGHIVKR-LYLDKVSGTALIDM 329
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCGA+ AR LF ++E ++ W+AMI HG EAL LF MK ++I+P++ TF
Sbjct: 330 YAKCGALTFARALFDQIEPRDLILWNAMISSYGIHGDGIEALSLFLKMKETNITPDHATF 389
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+L AC+H+G+VE+G +FH + I+P HY M D+L+RAG ++EAY I +M
Sbjct: 390 ASLLSACSHSGLVEEGQYWFHVLIDKSKIQPSEKHYACMVDLLSRAGQVEEAYQLIESMH 449
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
+P + ALLS H +G V +++LE P V+V+N ++ W+
Sbjct: 450 IKPGLAIWVALLSGCLNHKNLL---IGEMVAKKILESNPDDLGIYVLVSNFFSMAKKWDD 506
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+ R+ MKN G++K+ G S VE+ G + F + + I QIL+ L+ M+
Sbjct: 507 AAVFRKIMKNTGMRKVPGYSAVEVNGDLQAFLMEDKNHNQYQDILQILDILDNEMR 562
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 184/374 (49%), Gaps = 15/374 (4%)
Query: 44 LYQIHAQIQVSGLQ-NDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIR 102
+ QIHA I +GL NDA + +L+ + N+ AR++ S+ WN++I
Sbjct: 1 MTQIHALILTTGLFFNDANSIAQLI--ASYGRINNIIPARNVFEKMPQRSIN-AWNSMII 57
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
Y+ ++ P E + ++ M GIKP T+ LKAC+ + L+ G + G
Sbjct: 58 AYSRTNYPDEVLNLYYRMISEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGF 117
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
DV+ ++++ Y + A VFD M +R VVSW +IT ++ +A+ + M+
Sbjct: 118 DVFVVSSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQ 177
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
E D M+ ++ ACT LG+ G VH ++ R ++ L T+LIDMYAK G +
Sbjct: 178 KERTEGDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLE 237
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
A +F + +V +W A+I G AQ+G+A + L M+NS P+ V+ + L AC
Sbjct: 238 LASRVFEGIPYKSVISWGALISGFAQNGFANKTLASLVEMQNSGFKPDLVSLISSLSACA 297
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPM---RIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
G ++ G H H +K + ++ + D+ A+ G L A + +P
Sbjct: 298 QVGNLKVGKSL-----HGHIVKRLYLDKVSGTALIDMYAKCGALTFARALFDQI--EPRD 350
Query: 400 IVL-RALLSASSIH 412
++L A++S+ IH
Sbjct: 351 LILWNAMISSYGIH 364
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 143/293 (48%), Gaps = 21/293 (7%)
Query: 150 QVQANVTKSGLD-SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
Q+ A + +GL +D + L+ YG A VF+ M +RS+ +WN +I
Sbjct: 3 QIHALILTTGLFFNDANSIAQLIASYGRINNIIPARNVFEKMPQRSINAWNSMIIAYSRT 62
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+ E + + +M G +PD +T V L AC+ L +L +G+ + Q ++ G + +
Sbjct: 63 NYPDEVLNLYYRMISEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVFVV 122
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
++++++YAK G + A+++F +M + +V +W+ MI G AQ G +A++++ M+
Sbjct: 123 SSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKERTE 182
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR------IHYHTMADILARAGH 382
+ V +G++ AC G + G VHG R + ++ D+ A+ G
Sbjct: 183 GDGVVMVGLIQACTSLGDSKFGLS-------VHGHMVRREMNMDNVLQTSLIDMYAKNGK 235
Query: 383 LKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
L+ A +P+ ++++S ++ Q+G N+ L+E++ G
Sbjct: 236 LELASRVFEGIPY-------KSVISWGALISGFAQNGFANKTLASLVEMQNSG 281
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 156/431 (36%), Positives = 213/431 (49%), Gaps = 47/431 (10%)
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACA---EISGLNE-GMQVQA 153
N LIR A S RP A+ ++ + R G PT T P +LK+ A + G + V A
Sbjct: 175 NALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLALAVHA 234
Query: 154 NVTKSGLDS--------------------------------DVYTNNNLVRFYGSCRRKR 181
+ K GL D T N L+ Y R
Sbjct: 235 HAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYARAGRVT 294
Query: 182 DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
DA +FD+M R+ VSW+ ++ V+ EA+G F +M+ G PD+T ++ VL+AC
Sbjct: 295 DARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACA 354
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
+LG L GKWVH L + LGTAL+DMYAKCG + A +F M+E NV W+
Sbjct: 355 QLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTT 414
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
MI GLA HG EALELFS M+ + P+ + F+G LCAC H G+V+ G F M +
Sbjct: 415 MIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKY 474
Query: 362 GIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHD----AKYQ 417
GIKP HY M D+LAR G L EA + MP +P+ ++ AL++ H A+Y
Sbjct: 475 GIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELAEY- 533
Query: 418 DGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVE 477
V + +ELEP S V++ N YA G +R M+ G+ K G S VE
Sbjct: 534 ------VVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCSTVE 587
Query: 478 LGGSIHRFYSG 488
+ G IH+F G
Sbjct: 588 IKGVIHQFIVG 598
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 131/283 (46%), Gaps = 13/283 (4%)
Query: 44 LYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNL--TYARS---ILCNYVNDSVP---- 94
L ++HA I G +DA +L S+ L YAR+ + D +P
Sbjct: 251 LIRVHAGIL--GRLSDALVLLRTAASVDASTFNTLITAYARAGRVTDARALFDEMPARNA 308
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W+ ++ GY + REA+ +F M+ G++P + VL ACA++ L +G V
Sbjct: 309 VSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGY 368
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ + + V+ LV Y C + A +VF M E++V++W +I + EA
Sbjct: 369 LKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEA 428
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER-GTVLNCQLGTALID 273
+ F +M+ LG +PD+ + L ACT G + G+ + ++ + G + ++D
Sbjct: 429 LELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVD 488
Query: 274 MYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEA 315
+ A+ G + AR + +M + + W A++ G H E A
Sbjct: 489 LLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELA 531
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 156/431 (36%), Positives = 213/431 (49%), Gaps = 47/431 (10%)
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACA---EISGLNE-GMQVQA 153
N LIR A S RP A+ ++ + R G PT T P +LK+ A + G + V A
Sbjct: 175 NALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLALAVHA 234
Query: 154 NVTKSGLDS--------------------------------DVYTNNNLVRFYGSCRRKR 181
+ K GL D T N L+ Y R
Sbjct: 235 HAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYARAGRVT 294
Query: 182 DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
DA +FD+M R+ VSW+ ++ V+ EA+G F +M+ G PD+T ++ VL+AC
Sbjct: 295 DARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACA 354
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
+LG L GKWVH L + LGTAL+DMYAKCG + A +F M+E NV W+
Sbjct: 355 QLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTT 414
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
MI GLA HG EALELFS M+ + P+ + F+G LCAC H G+V+ G F M +
Sbjct: 415 MIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKY 474
Query: 362 GIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHD----AKYQ 417
GIKP HY M D+LAR G L EA + MP +P+ ++ AL++ H A+Y
Sbjct: 475 GIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELAEY- 533
Query: 418 DGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVE 477
V + +ELEP S V++ N YA G +R M+ G+ K G S VE
Sbjct: 534 ------VVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCSTVE 587
Query: 478 LGGSIHRFYSG 488
+ G IH+F G
Sbjct: 588 IKGVIHQFIVG 598
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 131/283 (46%), Gaps = 13/283 (4%)
Query: 44 LYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNL--TYARS---ILCNYVNDSVP---- 94
L ++HA I G +DA +L S+ L YAR+ + D +P
Sbjct: 251 LIRVHAGIL--GRLSDALVLLRTAASVDASTFNTLITAYARAGRVTDARALFDEMPARNA 308
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W+ ++ GY + REA+ +F M+ G++P + VL ACA++ L +G V
Sbjct: 309 VSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGY 368
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ + + V+ LV Y C + A +VF M E++V++W +I + EA
Sbjct: 369 LKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEA 428
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER-GTVLNCQLGTALID 273
+ F +M+ LG +PD+ + L ACT G + G+ + ++ + G + ++D
Sbjct: 429 LELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVD 488
Query: 274 MYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEA 315
+ A+ G + AR + +M + + W A++ G H E A
Sbjct: 489 LLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELA 531
>gi|356550382|ref|XP_003543566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 572
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 154/463 (33%), Positives = 249/463 (53%), Gaps = 16/463 (3%)
Query: 46 QIHAQIQVSGL--QNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSV-PIPWNNLIR 102
Q+H Q+ G+ ++ ++ L ++ F LS +L YAR +L N ++ +N L+R
Sbjct: 11 QVHGQVVKLGMGHKDASRKLSKVFTFAALSPFGDLNYARLLLST--NPTLNSYYYNTLLR 68
Query: 103 GYAWSDRPR---EAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
++ + P A+ +F+ M P FT+PF+LK C+ G Q+ A +TK G
Sbjct: 69 AFSQTPLPTPPFHALSLFLSMPS---PPDNFTFPFLLKCCSRSKLPPLGKQLHALLTKLG 125
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
D+Y N L+ Y A +FD M R VVSW +I V + EA+ F
Sbjct: 126 FAPDLYIQNVLLHMYSEFGDLLLARSLFDRMPHRDVVSWTSMIGGLVNHDLPVEAINLFE 185
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ--LGTALIDMYAK 277
+M G E +E T++ VL AC + G LS+G+ VH L E G ++ + + TAL+DMYAK
Sbjct: 186 RMLQCGVEVNEATVISVLRACADSGALSMGRKVHANLEEWGIEIHSKSNVSTALVDMYAK 245
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
G + AR +F + +V+ W+AMI GLA HG ++A+++F +M++S + P+ T V
Sbjct: 246 GGCIASARKVFDDVVHRDVFVWTAMISGLASHGLCKDAIDMFVDMESSGVKPDERTVTAV 305
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
L AC +AG++ +G+ F +++ +G+KP H+ + D+LARAG LKEA F+ MP +P
Sbjct: 306 LTACRNAGLIREGFMLFSDVQRRYGMKPSIQHFGCLVDLLARAGRLKEAEDFVNAMPIEP 365
Query: 398 NPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVS 456
+ ++ R L+ A +H DA + + + + + + GS ++ +N YA G W +
Sbjct: 366 DTVLWRTLIWACKVHGDADRAERLMKHLEIQDMRADDSGS--YILASNVYASTGKWCNKA 423
Query: 457 NVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIY 499
VR M GL K G S +E+ G +H F G + E I+
Sbjct: 424 EVRELMNKKGLVKPPGTSRIEVDGGVHEFVMGDYNHPEAEEIF 466
>gi|347954498|gb|AEP33749.1| chloroplast biogenesis 19, partial [Crucihimalaya wallichii]
Length = 491
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/478 (31%), Positives = 240/478 (50%), Gaps = 36/478 (7%)
Query: 68 RFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKP 127
R + + KN + N + W + I + R EA F DM+ G++P
Sbjct: 1 RAVPILTRKNYGXPKIQRLNQSTSETTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEP 60
Query: 128 TEFTYPFVLKACAEISGLNEGMQ--VQANVTKSGLD-SDVYTNNNLVRFY---GSCRRKR 181
T+ +L C + +E + + K GLD + V ++ Y G ++ R
Sbjct: 61 NHITFIALLSGCGDFPSGSETLSNLLHGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKAR 120
Query: 182 ----------------------------DACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+A K+FD M ER ++SW +I V+ + E
Sbjct: 121 LVFDYMEDINSVTWNTMIDGYMRSGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEE 180
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
A+ +F +M+ G PD ++ L+ACT LG LS G WVH ++ + N ++ +LID
Sbjct: 181 ALVWFREMQISGVRPDYVAIIAALNACTNLGALSFGLWVHRYVMNQDFKNNVRVSNSLID 240
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
+Y +CG V AR +F +ME+ V +W+++I+G A +G A E+L F M+ P+ VT
Sbjct: 241 LYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVT 300
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
F G L AC+H G+VE+G RYF M+ +GI P HY + D+ +RAG L++A I +M
Sbjct: 301 FTGALTACSHVGLVEEGLRYFQTMKRDYGISPRIEHYGCLVDLYSRAGRLEDALKVIESM 360
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
P +PN +V+ +LL+A H + + + L +L + N VI++N YA G WE
Sbjct: 361 PMKPNEVVIGSLLAACRTHGNNTV--LAERLMKHLSDLNVKSHSNYVILSNMYAADGKWE 418
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
S +RR MK +GLKK G S +E+ H F +G + VE A I ++LE ++ +++
Sbjct: 419 GASQMRRKMKGLGLKKQPGFSSIEIDDCTHVFMAGDSAHVETAIIREVLELVSSDLRL 476
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/420 (34%), Positives = 220/420 (52%), Gaps = 5/420 (1%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN I RPREA+ FI+ +R P T+ L AC++ LN GMQ+ V
Sbjct: 127 WNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVL 186
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
+SG D+DV N L+ FYG C++ R + +F +M ++ VSW ++ V+N +A
Sbjct: 187 RSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASV 246
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
+++ + E + + VLSAC + L LG+ +H ++ +G+AL+DMY
Sbjct: 247 LYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYG 306
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM--KNSSISPNYVTF 334
KCG + + F M E N+ T +++I G A G + AL LF M + +PNY+TF
Sbjct: 307 KCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTF 366
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ +L AC+ AG VE+G + F M +GI+P HY + D+L RAG ++ AY FI MP
Sbjct: 367 VSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMP 426
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
QP V AL +A +H K Q +G L +L+P+ S N V+++N +A G W +
Sbjct: 427 IQPTISVWGALQNACRMH-GKPQ--LGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAE 483
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ VR +K VG+KK G SW+ + +H F + S + I L L M+ +
Sbjct: 484 ANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGY 543
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 141/304 (46%), Gaps = 9/304 (2%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +LI G A + A+ F +M+R G+ P +FT+P KA A + G Q+ A
Sbjct: 24 VSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHAL 83
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K G DV+ + Y R + DA K+FD++ ER++ +WN I+ V + EA
Sbjct: 84 AVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREA 143
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F++ + + P+ T L+AC++ +L+LG +H ++ G + + LID
Sbjct: 144 IEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDF 203
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y KC + + ++F+ M N +W +++ Q+ E+A L+ + + +
Sbjct: 204 YGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMI 263
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPM--RIHY--HTMADILARAGHLKEAYTFI 390
VL AC +E G H H +K R + + D+ + G ++++
Sbjct: 264 SSVLSACAGMAGLELGRSI-----HAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAF 318
Query: 391 MNMP 394
MP
Sbjct: 319 DEMP 322
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 130/300 (43%), Gaps = 16/300 (5%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILC 86
+FL C HL Q+H + SG D + L+ F C S + +
Sbjct: 164 AFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK 223
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
N V+ W +L+ Y + +A +++ ++ ++ ++F VL ACA ++GL
Sbjct: 224 NAVS------WCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLE 277
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G + A+ K+ ++ ++ + LV YG C D+ + FD+M E+++V+ N +I
Sbjct: 278 LGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYA 337
Query: 207 ENLWLGEAVGYFVKM--KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER-GTVL 263
+ A+ F +M + G P+ T + +LSAC+ G + G + + G
Sbjct: 338 HQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEP 397
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEALELFSNM 322
+ + ++DM + G V A +M + + W A+ HG + L N+
Sbjct: 398 GAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENL 457
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 70/150 (46%)
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
R+VVSW +I+ +N A+ F +M+ G P++ T A L GK +
Sbjct: 21 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 80
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H ++ G +L+ +G + DMY K AR LF + E N+ TW+A I G
Sbjct: 81 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRP 140
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACN 342
EA+E F + PN +TF L AC+
Sbjct: 141 REAIEAFIEFRRIDGHPNSITFCAFLNACS 170
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MY+K ARL+ NV +W+++I GLAQ+G+ AL F M+ + PN T
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 334 F 334
F
Sbjct: 61 F 61
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 167/548 (30%), Positives = 265/548 (48%), Gaps = 68/548 (12%)
Query: 30 QCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
+ LS L+ C S + L +IHAQ+ ++G D I + V +S+ +N+ YA + +
Sbjct: 29 KTLSALQSCKSTEDLKKIHAQLIITGQIKDTFIATKTVESYAVSA-RNIDYAFWVFVG-I 86
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
N W +IRG+ + P +A+ + M++RG++ +FT+ FVLKA EG
Sbjct: 87 NYPDSYSWTTMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAYGLRPSYQEGR 146
Query: 150 QVQA-------------------------NVTKSGLDSDVYTNNNLVRFY---------G 175
V ++T + L D N+N+V + G
Sbjct: 147 IVHGKLVKVGFCYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITGCFGCG 206
Query: 176 SCRRKRD----------------------------ACKVFDDMCERSVVSWNVIITVCVE 207
R R A +FD M ER VVSW +I+ V+
Sbjct: 207 DTERARRLFGEMPERNVGSWNAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQ 266
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
N EA+ F +M G D + +LSAC ++G L +G+W+H + + L
Sbjct: 267 NGRAAEALELFKEMMLAGVSADSIIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFL 326
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
TAL+DMYAKCG + A +F+ M N+ +W+AM+ GLA HG+ ALELF M+++ +
Sbjct: 327 DTALVDMYAKCGCIDTAFGVFNTMPRKNLCSWNAMLSGLAIHGHGFAALELFKQMESTGV 386
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
PN +TF+ VL AC+H G VE+G++ F++M+ I P HY M DIL R G + EA
Sbjct: 387 GPNDITFVAVLSACSHIGSVEEGWKKFNQMDKEFNITPKVEHYGCMVDILCRQGLINEAK 446
Query: 388 TFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYA 447
I MP +PN ++ ALL+A +H VG +V + +L V+++N +A
Sbjct: 447 EMIRTMPLEPNVVIWGALLNACKVHG---YTNVGEDVVGYIQKLVSEDGGCYVLLSNIFA 503
Query: 448 EVGMWEKVSNVRRFMKNVGL-KKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
W +V R+ MK +G+ KK+ G S +EL +H F++ + + ++E LN
Sbjct: 504 AKSQWNEVEKTRKMMKQMGVEKKIPGYSSIELDSVVHDFFAEDRLHSKWREVSTVIERLN 563
Query: 507 LHMKVLNF 514
H++V +
Sbjct: 564 THLEVKGY 571
>gi|357136551|ref|XP_003569867.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Brachypodium distachyon]
Length = 580
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 159/463 (34%), Positives = 238/463 (51%), Gaps = 7/463 (1%)
Query: 44 LYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRG 103
L Q HA++ V+G ++ L + + L+ + ++ S +++L R
Sbjct: 23 LKQAHARLVVTG---HSRCLPLITKLANLAVAAGAAPYAHLVATSHPASDSFLFSSLARA 79
Query: 104 YAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD 163
P A+ + + + + F + V KACA++S L GM V A+ G SD
Sbjct: 80 ATHQGLPLAALAFYRCLLSAALPFSSFAFTAVAKACADLSALRTGMTVHAHSILLGFGSD 139
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
+ LV Y C R A K+FD + +++VV+WN +I+ +N + + + +MK
Sbjct: 140 RFVLTALVVLYSKCGRLPVARKLFDAIRDKNVVAWNAMISGYEQNGLAEQGIEVYKEMKV 199
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
PD T + LSAC + G L LG+ V +++ ++ LG+AL++MYA+CG V
Sbjct: 200 AKAVPDSMTFVATLSACAQAGALDLGREVERRIVSERMDISVFLGSALVNMYARCGVVDK 259
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
AR F ++E NV TW++MI G HG+ EA++L+ M+ PN VTF+ VL AC H
Sbjct: 260 ARQWFDVLQERNVVTWTSMIAGYGMHGHGHEAIKLYHLMRCKGPPPNDVTFVAVLSACAH 319
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN-MPFQPNPIVL 402
AG++ +G F M+ V+G+ P HY +M D+ RAG L+EA FI + MP P P V
Sbjct: 320 AGLITEGRDAFACMKRVYGLAPRVEHYCSMVDMYGRAGRLEEAMQFIRDSMPGDPGPEVW 379
Query: 403 RALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFM 462
A+L A +H +G EV RL+ LEP V+++N YA G V VR M
Sbjct: 380 TAILGACKMHK---NFSLGVEVAERLIRLEPENPSYHVLLSNIYALSGKMYHVEKVRNTM 436
Query: 463 KNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
LKK G S +ELGG+ H F G S + IYQ LE L
Sbjct: 437 IKRRLKKQIGYSLIELGGTSHLFRMGEKSHQKTREIYQYLEEL 479
>gi|224140139|ref|XP_002323442.1| predicted protein [Populus trichocarpa]
gi|222868072|gb|EEF05203.1| predicted protein [Populus trichocarpa]
Length = 526
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 210/378 (55%), Gaps = 4/378 (1%)
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
+ +CA L G+Q +G ++ Y ++LV FYG C +A KVF +M R+
Sbjct: 134 AVSSCASTRDLRGGIQYHCLAISAGFIANAYIGSSLVTFYGKCGELDNAYKVFKEMPVRN 193
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHL 254
VVSW II+ ++ + + + M++ +P++ T +LSACT G L G+ H
Sbjct: 194 VVSWTAIISGFAQDWQVDMCLQLYCLMRNSTLKPNDFTFTSLLSACTGSGALGQGRSAHC 253
Query: 255 QLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEE 314
Q+IE G V + AL+ MY KCG V A +F M ++ +W++MI G AQHG A +
Sbjct: 254 QIIEMGFVSYLHIANALVSMYCKCGNVEDAFHIFENMVGKDIVSWNSMIAGYAQHGLAVQ 313
Query: 315 ALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMA 374
+ LF MK+ + P+ +TFLGVL +C HAG VE G YF+ M +G+KP HY +
Sbjct: 314 GIGLFERMKSQGVKPDAITFLGVLSSCRHAGFVEGGRNYFNSMVE-YGVKPELDHYSCIV 372
Query: 375 DILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPR 434
D+L RAG L+EA FI MP PN ++ +L+S+ +H + + +G + L LEP
Sbjct: 373 DLLGRAGLLEEAQYFIERMPVSPNAVIWGSLVSSCRLHGSVW---IGIQAAENTLLLEPE 429
Query: 435 GSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVE 494
+ V +AN YA VG W++ + VR+ MK+ LK G SW+E+ ++RF + S
Sbjct: 430 CAATHVQLANLYASVGFWDQAARVRKLMKDRRLKTNPGCSWIEIKNEVYRFRAEDCSNTR 489
Query: 495 LAGIYQILETLNLHMKVL 512
++ I+ +L+ L HM L
Sbjct: 490 VSEIHDVLDWLVDHMITL 507
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 1/217 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +I G+A + + ++ M+ +KP +FT+ +L AC L +G
Sbjct: 195 VSWTAIISGFAQDWQVDMCLQLYCLMRNSTLKPNDFTFTSLLSACTGSGALGQGRSAHCQ 254
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ + G S ++ N LV Y C DA +F++M + +VSWN +I ++ +
Sbjct: 255 IIEMGFVSYLHIANALVSMYCKCGNVEDAFHIFENMVGKDIVSWNSMIAGYAQHGLAVQG 314
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+G F +MK G +PD T L VLS+C G + G+ ++E G + ++D+
Sbjct: 315 IGLFERMKSQGVKPDAITFLGVLSSCRHAGFVEGGRNYFNSMVEYGVKPELDHYSCIVDL 374
Query: 275 YAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHG 310
+ G + A+ RM N W +++ HG
Sbjct: 375 LGRAGLLEEAQYFIERMPVSPNAVIWGSLVSSCRLHG 411
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 9/169 (5%)
Query: 229 DETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLF 288
D + + +S+C +L G H I G + N +G++L+ Y KCG + A +F
Sbjct: 127 DASVLSNAVSSCASTRDLRGGIQYHCLAISAGFIANAYIGSSLVTFYGKCGELDNAYKVF 186
Query: 289 SRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVE 348
M NV +W+A+I G AQ + L+L+ M+NS++ PN TF +L AC +G +
Sbjct: 187 KEMPVRNVVSWTAIISGFAQDWQVDMCLQLYCLMRNSTLKPNDFTFTSLLSACTGSGALG 246
Query: 349 DGYRYFHEMEHVHGIKPMRIHYHTMADILA----RAGHLKEAYTFIMNM 393
G H I+ + Y +A+ L + G++++A+ NM
Sbjct: 247 QG-----RSAHCQIIEMGFVSYLHIANALVSMYCKCGNVEDAFHIFENM 290
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 163/462 (35%), Positives = 240/462 (51%), Gaps = 10/462 (2%)
Query: 55 GLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAV 114
G + A ++ L C S + AR +L + + +N +I GY ++ +V
Sbjct: 237 GFHSHAYVITGLA--CLYSKCGEIETAR-LLFGQIGQPDLVSYNAMISGYTCNNETESSV 293
Query: 115 WVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFY 174
+F ++ G K + ++ L+ + TKSG+ S+ + L Y
Sbjct: 294 RLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVY 353
Query: 175 GSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTML 234
A +FD+ E+S+ SWN +I+ +N +A+ F +M+ P+ T+
Sbjct: 354 SRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVT 413
Query: 235 VVLSACTELGNLSLGKWVHLQLIERGTV-LNCQLGTALIDMYAKCGAVGCARLLFSRMEE 293
+LSAC +LG LSLGKWVH LI R + N + TALIDMYAKCG++ A+ LFS M E
Sbjct: 414 SILSACAQLGALSLGKWVH-DLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPE 472
Query: 294 INVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRY 353
N TW+AMI G HGY EAL LF+ M +S +SP VTFL VL AC+HAG+V +G
Sbjct: 473 KNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEI 532
Query: 354 FHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH- 412
F M H HG +P+ HY M D+L RAG+L +A FI MP +P P V ALL A IH
Sbjct: 533 FRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHK 592
Query: 413 DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKG 472
DA + +L EL+P+ V+++N Y+ + + ++VR +K L K G
Sbjct: 593 DAN----LARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPG 648
Query: 473 MSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ +E+ ++H F SG S + IY +LE L M+ F
Sbjct: 649 CTLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGF 690
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 148/316 (46%), Gaps = 2/316 (0%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN ++ G + EA+ +F DM + GI T VL AE+ L GM +Q
Sbjct: 175 WNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAM 234
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
K G S Y L Y C A +F + + +VS+N +I+ N +V
Sbjct: 235 KVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVR 294
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F ++ G + + ++++ ++ G+L L + +H + G V N + TAL +Y+
Sbjct: 295 LFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYS 354
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
+ + ARLLF E ++ +W+AMI G AQ+G E+A+ LF M+ + PN VT
Sbjct: 355 RLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTS 414
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
+L AC G + G ++ H++ + + + D+ A+ G + EA MP +
Sbjct: 415 ILSACAQLGALSLG-KWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMP-E 472
Query: 397 PNPIVLRALLSASSIH 412
N + A++S +H
Sbjct: 473 KNAVTWNAMISGYGLH 488
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 151/308 (49%), Gaps = 7/308 (2%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
L+ + + L Q HAQI ++GL ND + +L LS K + A S+L + + +
Sbjct: 14 LTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTH--KLSHLKAIDQA-SLLFSTIPN 70
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEISGLNEGMQ 150
+N LIR ++ ++ P AV ++ +++ ++P FTY FV+ + +
Sbjct: 71 PDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHA 130
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+G SD++ + +V Y R A KVFD M ER V WN +++ V+N
Sbjct: 131 HS---IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSC 187
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
EA+ F M G D TT+ VL EL +L+LG + ++ G + + T
Sbjct: 188 FDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITG 247
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
L +Y+KCG + ARLLF ++ + ++ +++AMI G + E ++ LF + S N
Sbjct: 248 LACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVN 307
Query: 331 YVTFLGVL 338
+ +G++
Sbjct: 308 SSSIVGLI 315
>gi|242062638|ref|XP_002452608.1| hypothetical protein SORBIDRAFT_04g028970 [Sorghum bicolor]
gi|241932439|gb|EES05584.1| hypothetical protein SORBIDRAFT_04g028970 [Sorghum bicolor]
Length = 485
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 148/409 (36%), Positives = 216/409 (52%), Gaps = 42/409 (10%)
Query: 135 VLKACAEI-SGLNEGMQVQANVTKSGLD---SDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
L ACA + + + E Q+ A + KSG+ SDV + +L+R Y R DA KVFD M
Sbjct: 62 ALAACARLPAAVAEAEQIHALLVKSGVPRTVSDVQVSTSLIRAYARLGRVCDARKVFDGM 121
Query: 191 CERSVVSWNVIITVCVE-------------------------------NLWLGEAVGYFV 219
+R+VV+WNV++ V N W EAV FV
Sbjct: 122 PDRTVVTWNVLLDALVRDGDLDAAWEVFVEMPQRNVVSWNTIIAGFTRNGWAQEAVDLFV 181
Query: 220 KMK-DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
+M G PDE TM+ +SA ++G L +GK H ++ R L+ LG ALI MY +C
Sbjct: 182 EMTVAYGLAPDEATMVGFVSAVRDIGLLGIGKSAHGYVLRREFSLDGALGVALISMYTRC 241
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
G++G A F + NV W+++I G A HG E+AL LF+ M+ I PN VTF+ VL
Sbjct: 242 GSMGAAHSCFLSVTTKNVEHWTSLIAGFAAHGQPEKALRLFAEMRRVGIEPNGVTFVAVL 301
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
ACNH G+V +G++YF M + GI+PM HY + D+L RAG LKEA+ N+P P
Sbjct: 302 NACNHGGLVSEGFKYFDLMRSM-GIRPMIQHYGCLVDLLGRAGFLKEAFNLASNLPEDPG 360
Query: 399 PIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSN 457
++ +LL+A H D + + + +L + +P + V+++N YA WE +
Sbjct: 361 FVIWSSLLAACHSHGDVEMAELTAS----KLADAKPSHGSSYVLLSNTYARAKQWEDLRR 416
Query: 458 VRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
RR M+ G+ K G+SW+E+ G +H F + +E IYQ+LE L
Sbjct: 417 TRRRMEEHGVTKKPGLSWIEVDGGVHSFATADKLHMESEDIYQMLEDLK 465
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMK-RRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ WN +I G+ + +EAV +F++M G+ P E T + A +I L G
Sbjct: 158 VSWNTIIAGFTRNGWAQEAVDLFVEMTVAYGLAPDEATMVGFVSAVRDIGLLGIGKSAHG 217
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
V + D L+ Y C A F + ++V W +I + +
Sbjct: 218 YVLRREFSLDGALGVALISMYTRCGSMGAAHSCFLSVTTKNVEHWTSLIAGFAAHGQPEK 277
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG-KWVHLQLIERGTVLNCQLGTALI 272
A+ F +M+ +G EP+ T + VL+AC G +S G K+ L + G Q L+
Sbjct: 278 ALRLFAEMRRVGIEPNGVTFVAVLNACNHGGLVSEGFKYFDL-MRSMGIRPMIQHYGCLV 336
Query: 273 DMYAKCGAVGCARLLFSRM-EEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
D+ + G + A L S + E+ WS+++ HG E A S + ++ S
Sbjct: 337 DLLGRAGFLKEAFNLASNLPEDPGFVIWSSLLAACHSHGDVEMAELTASKLADAKPS 393
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 11/183 (6%)
Query: 232 TMLVVLSACTEL-GNLSLGKWVHLQLIERG---TVLNCQLGTALIDMYAKCGAVGCARLL 287
++ L+AC L ++ + +H L++ G TV + Q+ T+LI YA+ G V AR +
Sbjct: 58 ALIPALAACARLPAAVAEAEQIHALLVKSGVPRTVSDVQVSTSLIRAYARLGRVCDARKV 117
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMV 347
F M + V TW+ ++ L + G + A E+F M N V++ ++ G
Sbjct: 118 FDGMPDRTVVTWNVLLDALVRDGDLDAAWEVFVEMPQR----NVVSWNTIIAGFTRNGWA 173
Query: 348 EDGYRYFHEMEHVHGIKP---MRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRA 404
++ F EM +G+ P + + + + G K A+ +++ F + + A
Sbjct: 174 QEAVDLFVEMTVAYGLAPDEATMVGFVSAVRDIGLLGIGKSAHGYVLRREFSLDGALGVA 233
Query: 405 LLS 407
L+S
Sbjct: 234 LIS 236
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 159/488 (32%), Positives = 249/488 (51%), Gaps = 19/488 (3%)
Query: 31 CLSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCN 87
C S L C S ++Q +HA + L++D + L+ + ++LT AR++
Sbjct: 319 CASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDM--YAKCEHLTEARAVFEA 376
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
D I +N +I GY+ A+ VF M+ +KP+ T+ +L + S +
Sbjct: 377 LAEDDA-ISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIEL 435
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
Q+ + KSG D+Y ++L+ Y DA VF+ M R +V WN +I +
Sbjct: 436 SKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQ 495
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
N EAV F +++ G P+E T + +++ + L ++ G+ H Q+I+ G + +
Sbjct: 496 NEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHV 555
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
ALIDMYAKCG + RLLF +V W++MI AQHG AEEAL +F M + +
Sbjct: 556 SNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGV 615
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
PNYVTF+GVL AC HAG+V++G R+F M+ + I+P HY ++ ++ R+G L A
Sbjct: 616 EPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAK 675
Query: 388 TFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGN-EVRRRLLEL----EPRGSQNLVIV 442
FI MP +P V R+LLSA + GN E+ R E+ +P S V++
Sbjct: 676 EFIERMPIEPAAAVWRSLLSACHL--------FGNVEIGRYATEMALLADPADSGPSVLM 727
Query: 443 ANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQIL 502
+N YA G+W +R+ M G+ K G SW+E+ +H F + E IY +L
Sbjct: 728 SNIYASRGLWSDAQKLRQGMDCAGVVKEPGYSWIEVMKEVHTFIARGREHPEADVIYSLL 787
Query: 503 ETLNLHMK 510
+ L +K
Sbjct: 788 DELTSILK 795
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 129/255 (50%)
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
P+ W +I GY+ + A+ +F M G++P F + AC+ + L G Q
Sbjct: 180 PVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHG 239
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+ +++D N L+ Y C R A K+FD M R++VSW +I ++N E
Sbjct: 240 YAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAE 299
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
A+ F ++ G++PD +L++C L + G+ VH I+ + + +LID
Sbjct: 300 AMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLID 359
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MYAKC + AR +F + E + +++AMI G ++ G A+++FS M+ S+ P+ +T
Sbjct: 360 MYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLT 419
Query: 334 FLGVLCACNHAGMVE 348
F+ +L + +E
Sbjct: 420 FVSLLGVSSSQSAIE 434
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 155/363 (42%), Gaps = 26/363 (7%)
Query: 38 CCSKKHLYQI----HAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSV 93
C + L+++ HA+ V+G D + L+R S + AR + D +
Sbjct: 20 CLAGDRLHRLLPLAHARAVVTGALPDLFLANLLLR--AYSKLGRVRDARRLF-----DRM 72
Query: 94 P----IPWNNLIRGYAWSDRPREAVWVFIDMKRR--GIKPTEFTYPFVLKACAEISGLNE 147
P + W + I +A +AV +F +R G P EF L+ACA+ ++
Sbjct: 73 PHKNLVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSF 132
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G QV + GLD +VY L+ Y A VFD + ++ V+W +IT +
Sbjct: 133 GQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQ 192
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
G A+ F KM G PD + +SAC+ LG L G+ H + +
Sbjct: 193 IGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASV 252
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
ALID+Y KC + AR LF ME N+ +W+ MI G Q+ EA+ +F +
Sbjct: 253 INALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGW 312
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPM----RIHYHTMADILARAGHL 383
P+ +L +C + G + H H IK +++ D+ A+ HL
Sbjct: 313 QPDVFACASILNSCGSLAAIWQGRQV-----HAHAIKANLESDEYVKNSLIDMYAKCEHL 367
Query: 384 KEA 386
EA
Sbjct: 368 TEA 370
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 163/536 (30%), Positives = 275/536 (51%), Gaps = 51/536 (9%)
Query: 21 NSDLLSKARQCLSFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKN 77
++ L S +R L+ C + L ++HA I +G+ + +S
Sbjct: 6 HTALSSVSRHYRFLLRSCARESSLDIGERLHATIITTGIAGAPETFLHNALLQFYASCGC 65
Query: 78 LTYARSILCNYVNDSVP------IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFT 131
AR + D +P + W L+ + + EA+ +F++M+R G+KP E T
Sbjct: 66 AWQARKVF-----DEIPHSHKDTVDWTTLMGCFVRHNVSDEALLIFVEMRRCGVKPDEVT 120
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDS---------DVYTNNNLVR-----FY--- 174
+ CA + + G Q + K GL D+Y + L+ FY
Sbjct: 121 LVCLFGGCARLGDVVVGAQGHGCMVKMGLGGVEKACNAVMDMYAKSGLMGEARRVFYEMK 180
Query: 175 ------------GSCRRK--RDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK 220
G R + R+ VFD+M ER+ V+W ++I +++ E+ +
Sbjct: 181 GQSVVSWTVILDGVIRSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVRE 240
Query: 221 MK-DLGFEPDETTMLVVLSACTELGNLSLGKWVH-LQLIERGTVLNCQLGTALIDMYAKC 278
M DL E + T+ +L+AC++ G+L +G+WVH L + LN +GTA++DMYAKC
Sbjct: 241 MIFDLEMELNYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAKC 300
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
G + A F +M + NV +W+AM+ GLA HG AL++F M + P+ VTF VL
Sbjct: 301 GRIHIAFKFFKKMPQRNVVSWNAMLSGLAMHGLGRAALDIFPQMFKEA-KPDDVTFTSVL 359
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
AC+H+G+V+ G YF +E V+GI P HY M D+L RAG L+EA + MP +PN
Sbjct: 360 SACSHSGLVDQGCFYFGNLESVYGITPKVEHYACMVDLLGRAGRLEEAEILVREMPIRPN 419
Query: 399 PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
+VL +LL + SIH K Q +G + + L++L+P+ ++ ++++N YA G + +++
Sbjct: 420 EVVLGSLLGSCSIH-GKLQ--LGEHLLQELVQLDPQNTEYHILLSNMYALAGKQNRANSL 476
Query: 459 RRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
R+ +K G+KK+ GMS + +GG +H+F +G S +Y +L+ + +++ +
Sbjct: 477 RQVLKKRGIKKVPGMSSIHVGGQVHQFSAGDKSHPRTREVYNMLDEMIPRLRLAGY 532
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 134/405 (33%), Positives = 211/405 (52%), Gaps = 4/405 (0%)
Query: 83 SILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI 142
++ + +++ WN ++ + + + +F M G ++TY VL+ C +
Sbjct: 408 TVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSL 467
Query: 143 SGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII 202
L G QV A + KSGL +D + LV Y AC VF+ + ER SW VI+
Sbjct: 468 MNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIM 527
Query: 203 TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV 262
+ + + V YF M P + T+ V LS C+++ +L G +H I+ G
Sbjct: 528 SGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWN 587
Query: 263 LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM 322
+ G AL+DMY KCG + A +LF E + W+ +I G +QHG+ +AL+ F M
Sbjct: 588 SSVVSG-ALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQM 646
Query: 323 KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGH 382
+ P+ +TF+GVL AC+HAG++ +G +YF + ++GI P HY M DIL++AG
Sbjct: 647 VDEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAGR 706
Query: 383 LKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIV 442
L EA + I MP P+ + R +L A IH + RL ELEP + + +++
Sbjct: 707 LVEAESLINQMPLAPDSSIWRTILGACRIH---RNIEIAERAAERLFELEPHDASSSILL 763
Query: 443 ANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYS 487
+N YA++G W V+ VR + + G+KK G SW+E+ G IH F S
Sbjct: 764 SNIYADLGRWSDVTRVRNILLDHGVKKEPGCSWIEINGQIHMFLS 808
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 168/361 (46%), Gaps = 34/361 (9%)
Query: 16 KPSNCNSDLLSKA-----RQCLSFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELV 67
PS+ N+ L + A R + L+ C ++ L ++HA++ S L D +L L+
Sbjct: 33 SPSHANARLHTVAHAEELRLHAAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLL 92
Query: 68 R-FCTLSSSKNLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKR 122
+C L AR + D +P + W +I + + +A+ +F M +
Sbjct: 93 NMYCKCG---RLVDARRVF-----DGMPHRDIVAWTAMISAHTAAGDSDQALDMFARMNQ 144
Query: 123 RGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK-SGLDSDVYTNNNLVRFYGSCRRKR 181
GI P FT VLKAC+ S QV V K +GLD D Y ++LV Y SC
Sbjct: 145 EGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLD-DPYVGSSLVEAYTSCGELD 203
Query: 182 DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
A V + ERS VSWN ++ + + K+ G E + T+ VL C
Sbjct: 204 AAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCM 263
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
ELG G+ VH +I+RG + L + L++MY++C + A +F R++E +V SA
Sbjct: 264 ELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSA 323
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV-----------LCACNHAGMVEDG 350
MI +H A EAL+LF M + PN+ F+G+ LC HA +V+ G
Sbjct: 324 MISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSG 383
Query: 351 Y 351
+
Sbjct: 384 F 384
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 150/314 (47%), Gaps = 8/314 (2%)
Query: 33 SFLKLCCSKKH---LYQIHAQI-QVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
S LK C H +Q+H Q+ +++GL +D + LV +S L A ++L
Sbjct: 156 SVLKACSGGSHSKFTHQVHGQVVKLNGL-DDPYVGSSLVE--AYTSCGELDAAETVLLGL 212
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
S + WN L+ GYA R + + + G + +++T P VLK C E+ G
Sbjct: 213 PERS-DVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYG 271
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
V A+V K GL++D N+ LV Y C +A +VF + E VV + +I+ +
Sbjct: 272 QSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRH 331
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
EA+ FVKM +G +P+ + + + G+ +L + VH +++ G + +G
Sbjct: 332 DMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVG 391
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
A+++MY K GAV A + F + E + ++W+ ++ E+ L +F M S
Sbjct: 392 DAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFS 451
Query: 329 PNYVTFLGVLCACN 342
N T++ VL C
Sbjct: 452 ANKYTYVSVLRCCT 465
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 140/319 (43%), Gaps = 7/319 (2%)
Query: 38 CCSK----KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSV 93
CC + K+ +HA + GL+ D + LV + S Y I +++
Sbjct: 261 CCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFI---RIDEPD 317
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ + +I + D EA+ +F+ M G+KP + + + + N V A
Sbjct: 318 VVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHA 377
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+ KSG + ++ Y +DA FD + E SWN I++ +
Sbjct: 378 YIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQ 437
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
+ F +M GF ++ T + VL CT L NL G VH +++ G + + L+D
Sbjct: 438 GLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVD 497
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MYA+ G A L+F +++E + ++W+ ++ G A+ AE+ +E F +M +I P+ T
Sbjct: 498 MYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDAT 557
Query: 334 FLGVLCACNHAGMVEDGYR 352
L C+ + G +
Sbjct: 558 LAVSLSVCSDMASLGSGLQ 576
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 242/489 (49%), Gaps = 37/489 (7%)
Query: 34 FLKLCCSKKHLY----QIHAQIQVSGLQNDAQI-------------LKELVRFCTLSSSK 76
FL C+K + Q+H Q+ G D I L++ + SS +
Sbjct: 108 FLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHR 167
Query: 77 NLTYARSILCNYVN-----------DSVPI----PWNNLIRGYAWSDRPREAVWVFIDMK 121
++ +++ Y + D +P+ WN I GYA + +EA+ +F M
Sbjct: 168 DVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMM 227
Query: 122 RRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKR 181
+ ++P E T VL ACA+ + G QV + + G ++ N L+ Y C
Sbjct: 228 KTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELE 287
Query: 182 DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
AC +F + + V+SWN +I EA+ F M G +P++ TML +LSAC
Sbjct: 288 TACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACA 347
Query: 242 ELGNLSLGKWVHLQLIER--GTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
LG + +G+W+H+ + +R G L T+LIDMYAKCG + A+ +F M ++ +W
Sbjct: 348 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSW 407
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+AMI G A HG A A ++FS M+ + I P+ +TF+G+L AC+H+GM++ G F M
Sbjct: 408 NAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTR 467
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
+ + P HY M D+ +G KEA I M +P+ ++ +LL A +H
Sbjct: 468 DYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHG---NVE 524
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
+G + L+++EP + V+++N YA W +V+ R + + G+KK+ G S +E+
Sbjct: 525 LGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEID 584
Query: 480 GSIHRFYSG 488
+H F G
Sbjct: 585 SVVHEFIIG 593
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/465 (31%), Positives = 237/465 (50%), Gaps = 12/465 (2%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H + +GL +D ++ ++ + + K + L V + + +N +I G+
Sbjct: 234 VHGCVIKAGLDSDVFLVSAMI---DMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCR 290
Query: 107 SDR------PREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGL 160
++ EA+ ++ +++ RG++PTEFT+ VL+AC L G Q+ V K
Sbjct: 291 TETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTF 350
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK 220
D + + L+ Y + D + F + +V+W +++ CV+N +A+ F +
Sbjct: 351 QEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHE 410
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
G +PD T+ V++AC L G+ + + G +G + + MYA+ G
Sbjct: 411 SLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGD 470
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
V A F ME +V +WSA+I AQHG A +AL F M ++ + PN +TFLGVL A
Sbjct: 471 VDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTA 530
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPI 400
C+H G+V++G RY+ M +G+ P H + D+L RAG L +A FI N F +P+
Sbjct: 531 CSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPV 590
Query: 401 VLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRR 460
+ R+LL++ IH + G V R++ELEP S + VI+ N Y + G S R
Sbjct: 591 IWRSLLASCRIHRDLER---GQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRD 647
Query: 461 FMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
MK G+KK G+SW+EL +H F +G S E + IY LE +
Sbjct: 648 LMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEM 692
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 130/272 (47%), Gaps = 12/272 (4%)
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P + +N LI Y+ ++ +R G+ F+Y L AC+ L
Sbjct: 67 DEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLR 126
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G V A GL S V+ +N+LV Y C +A +VFD ER VSWN +++ V
Sbjct: 127 AGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYV 186
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGN--LSLGKWVHLQLIERGTVLN 264
E V F M+ G + + V+ C+ G+ + + + VH +I+ G +
Sbjct: 187 RAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSD 246
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ------HGYAEEALEL 318
L +A+IDMYAK GA+ A LF ++E NV ++ MI G + A EAL L
Sbjct: 247 VFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTL 306
Query: 319 FSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
+S +++ + P TF VL ACN AG +E G
Sbjct: 307 YSEVQSRGMQPTEFTFSSVLRACNLAGYLEFG 338
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 122/280 (43%), Gaps = 8/280 (2%)
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
+ ++ N L+ Y A ++ D+M R+ VS+N++I ++ +
Sbjct: 41 ASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARA 100
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
+ G + D + L+AC+ G+L G+ VH I G + +L+ MY+KCG +
Sbjct: 101 RRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEM 160
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
G AR +F EE + +W++++ G + G EE + +F+ M+ + N V+ C
Sbjct: 161 GEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCC 220
Query: 342 NHAGMVEDGYRYFHEMEH----VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
+ G DG E H G+ M D+ A+ G L EA ++ +P
Sbjct: 221 SGRG---DGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQ-EP 276
Query: 398 NPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
N ++ +++ + V +E E++ RG Q
Sbjct: 277 NVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQ 316
>gi|224056897|ref|XP_002299078.1| predicted protein [Populus trichocarpa]
gi|222846336|gb|EEE83883.1| predicted protein [Populus trichocarpa]
Length = 488
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 160/497 (32%), Positives = 241/497 (48%), Gaps = 61/497 (12%)
Query: 26 SKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKE--LVRFCTLSSSKNLTYARS 83
++A + L+ C + + Q+HAQ VSGL + L + T+S + YA S
Sbjct: 11 TRAPATIISLRTCHDFQEVKQLHAQFVVSGLLGYHPLCARRLLEAYVTMS---QIYYAFS 67
Query: 84 ILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS 143
I + +P P V+V+ M R G+ FTY FVLKAC+ +
Sbjct: 68 IF-----ERIPSP----------------DVFVYNTMIR-GLTMDNFTYTFVLKACSHLK 105
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKV----------------- 186
EG QV + K+G+ D + +++L+ Y + DA +V
Sbjct: 106 APFEGKQVHCQIIKAGIVPDTHIHSSLIHMYTNSGSIDDAERVLGEFSEENTLAKNAMIS 165
Query: 187 --------------FDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETT 232
FDDM + SW+ +IT +N EA+ F M P+E
Sbjct: 166 GYLTEGRVDKARKMFDDMAAKDAASWSALITGYTKNGMHTEALALFQDMMVSHILPNEAA 225
Query: 233 MLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME 292
++ +LSAC +LG L G+W+H + + +++ +L TALIDMYAK G++ C LF +M
Sbjct: 226 LVSLLSACGQLGTLHQGRWIHAYIDKTRVLMSTKLTTALIDMYAKSGSIECGYGLFQKMA 285
Query: 293 EINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR 352
+V TW MI A HG+A + +LF M I PN V F+ +L AC+HAG VE+G +
Sbjct: 286 RRDVVTWGVMISAFAIHGHASKCFQLFDEMLADGIRPNKVIFVAILSACSHAGCVEEGRQ 345
Query: 353 YFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
YF +MEH GIKP HY M D+L RAG L +A I++MP QPN I+ +LL A H
Sbjct: 346 YFSQMEHGFGIKPSIEHYGCMVDLLGRAGLLADAEQLILSMPKQPNSIIWGSLLGACRTH 405
Query: 413 DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKG 472
+ + G L+ELEP + +A G E+ + +R+ + + G
Sbjct: 406 NDLKR---GTWAFENLMELEPTSGDRHKLAGLMFANAGEKEEAAKIRKMIHEKEMVTTCG 462
Query: 473 MSWVELGGSIHRFYSGY 489
S++E+ G++H F GY
Sbjct: 463 SSFIEVEGAVHEFTVGY 479
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 156/468 (33%), Positives = 250/468 (53%), Gaps = 19/468 (4%)
Query: 46 QIHAQIQVSGLQNDAQILKELV----RFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
QIHA +GL +D Q+ LV +FC++ Y I + + D + W +I
Sbjct: 440 QIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMK------YMDCIF-DKMPDKDVVSWTTII 492
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
G+A + A+ +F +++ GI +L AC+ + ++ ++ + + + GL
Sbjct: 493 AGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL- 551
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
SD+ N +V YG C A ++F+ + + VVSW +I+ V N EA+ F M
Sbjct: 552 SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLM 611
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
K+ G EPD +++ +LSA L L GK +H LI +G VL L + L+DMYA+CG +
Sbjct: 612 KETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTL 671
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
+R +F+ + ++ W++MI HG A++LF M++ SI+P+++ F+ VL AC
Sbjct: 672 EKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYAC 731
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIV 401
+H+G++ +G R+ M++ + ++P HY + D+L RA HL+EAY F+ M +P V
Sbjct: 732 SHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEV 791
Query: 402 LRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRF 461
ALL A IH K +G ++LLE++P N V+V+N YA W+ V VR
Sbjct: 792 WCALLGACQIHSNK---ELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMR 848
Query: 462 MKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIY----QILETL 505
MK GLKK G SW+E+G +H F + S + IY QI E L
Sbjct: 849 MKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKL 896
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 142/266 (53%)
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
+L AR + + WN++I Y+ + + EA+ +F +M++ + P +T+ L
Sbjct: 266 DLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAAL 325
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
+AC + S + +GM + A V KS +V+ N L+ Y + +A +F +M + +
Sbjct: 326 QACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTI 385
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
SWN +++ V+N EA+ ++ +M+D G +PD ++ +++A GN G +H
Sbjct: 386 SWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYA 445
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
++ G + Q+G +L+DMYAK ++ +F +M + +V +W+ +I G AQ+G AL
Sbjct: 446 MKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRAL 505
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACN 342
ELF ++ I + + +L AC+
Sbjct: 506 ELFREVQLEGIDLDVMMISSILLACS 531
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 172/372 (46%), Gaps = 19/372 (5%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRF------CTLSSSKNLTYARS 83
S L+LC SKK L Q+HA + S ++ L + F C + + K
Sbjct: 119 SVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEK------- 171
Query: 84 ILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS 143
L + + WN +I Y + P ++ ++ +M+ GI T+P +LKAC +
Sbjct: 172 -LFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLK 230
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER-SVVSWNVII 202
G +V K G S V+ N++V Y C A ++FD M E+ VVSWN +I
Sbjct: 231 DRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMI 290
Query: 203 TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV 262
+ N EA+ F +M+ P+ T + L AC + + G ++H +++
Sbjct: 291 SAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYY 350
Query: 263 LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM 322
+N + ALI MYA+ G +G A +F M++ + +W++M+ G Q+G EAL+ + M
Sbjct: 351 INVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEM 410
Query: 323 KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGH 382
+++ P+ V + ++ A +G +G + H +G+ +++ D+ A+
Sbjct: 411 RDAGQKPDLVAVISIIAASARSGNTLNGMQ-IHAYAMKNGLDSDLQVGNSLVDMYAKFCS 469
Query: 383 LKEAYTFIMNMP 394
+K MP
Sbjct: 470 MKYMDCIFDKMP 481
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 150/431 (34%), Positives = 221/431 (51%), Gaps = 47/431 (10%)
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACA---EISGLNE-GMQVQA 153
+ LIR +A S RP+ A+ ++ + R G+ PT T P +LK+ A + G + V A
Sbjct: 57 DALIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGARRLALAVHA 116
Query: 154 NVTKSGLDSDVYTNNNLVRFYGS--------------------------------CRRKR 181
+ + GL + NN L+R + R
Sbjct: 117 HAVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDASTFNTLITAHARAGRVA 176
Query: 182 DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
DA +FD+M ER+ VSW+ ++ V+ EA+G F +M+ G PD+T ++ VL+AC
Sbjct: 177 DARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACA 236
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
+LG L GKWVH L + LGTAL+DMYAKCG V +F M++ NV W+
Sbjct: 237 QLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTT 296
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
MI GLA HG ++L LFS M++S + P+ + F+G LCAC H G+V+ G F+ M + +
Sbjct: 297 MIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNY 356
Query: 362 GIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHD----AKYQ 417
GIKP HY M D+LAR G L EA + MP +P+ ++ AL++ H A+Y
Sbjct: 357 GIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGCRFHKNVELAEY- 415
Query: 418 DGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVE 477
V + +ELEP S V++ N Y+ G +R M+ G++K G S VE
Sbjct: 416 ------VIKHWIELEPDKSGAYVLLGNIYSASGRHASAREIRNLMREKGVEKTPGCSNVE 469
Query: 478 LGGSIHRFYSG 488
+ G IH+F G
Sbjct: 470 IKGVIHQFIVG 480
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 110/231 (47%), Gaps = 6/231 (2%)
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P + W+ ++ GY + REA+ VF M+ +G++P + VL ACA++ L
Sbjct: 183 DEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALE 242
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
+G V + + + V+ LV Y C + +VF+ M +++V++W +I
Sbjct: 243 QGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLA 302
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER-GTVLNC 265
+ +++ F +M+ G +PD+ + L ACT G + G+ + ++ G
Sbjct: 303 MHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKI 362
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEA 315
+ ++D+ A+ G + AR + +M + + W A++ G H E A
Sbjct: 363 EHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGCRFHKNVELA 413
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 21/266 (7%)
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGL-DSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
Y +L C+ + ++QA + SGL ++ L+R + S R + A ++ +
Sbjct: 20 YVELLSRCSGGADARPIARIQAALVTSGLLRRSAELHDALIRAHASSGRPQAALPLYAHL 79
Query: 191 CERSVVSWNVIITVCVENLWLGEAV-----------GYFVKMKDLGFEPDETTMLVVLSA 239
+ + +++L L AV + V++ GF L+V +A
Sbjct: 80 IRAGLFPTPHTLPSLLKSLALSPAVPGARRLALAVHAHAVRLGLAGF-------LLVNNA 132
Query: 240 CTELGNLSLGKWVHLQLIERGTV-LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
+ LG+ L+ R + ++ LI +A+ G V AR LF M E N +
Sbjct: 133 LIRVHAGLLGRLADAHLLLRTSAAVDASTFNTLITAHARAGRVADARSLFDEMPERNAVS 192
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
WSAM+ G Q G EAL +FS M+ + P+ +GVL AC G +E G ++ H
Sbjct: 193 WSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQG-KWVHGYL 251
Query: 359 HVHGIKPMRIHYHTMADILARAGHLK 384
+ I+ + D+ A+ G ++
Sbjct: 252 KANNIRMTVFLGTALVDMYAKCGEVQ 277
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 156/471 (33%), Positives = 251/471 (53%), Gaps = 19/471 (4%)
Query: 43 HLYQIHAQIQVSGLQNDAQILKELV----RFCTLSSSKNLTYARSILCNYVNDSVPIPWN 98
H QIHA +GL +D Q+ LV +FC++ Y I + + D + W
Sbjct: 401 HGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMK------YMDCIF-DKMPDKDVVSWT 453
Query: 99 NLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
+I G+A + A+ +F +++ GI +L AC+ + ++ ++ + + +
Sbjct: 454 TIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRK 513
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
GL SD+ N +V YG C A ++F+ + + VVSW +I+ V N EA+ F
Sbjct: 514 GL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELF 572
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
MK+ G EPD +++ +LSA L L GK +H LI +G VL L + L+DMYA+C
Sbjct: 573 HLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARC 632
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
G + +R +F+ + ++ W++MI HG A++LF M++ SI+P+++ F+ VL
Sbjct: 633 GTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVL 692
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
AC+H+G++ +G R+ M++ + ++P HY + D+L RA HL+EAY F+ M +P
Sbjct: 693 YACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPT 752
Query: 399 PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
V ALL A IH K +G ++LLE++P N V+V+N Y+ W+ V V
Sbjct: 753 AEVWCALLGACQIHSNK---ELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXV 809
Query: 459 RRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIY----QILETL 505
R MK GLKK G SW+E+G +H F + S + IY QI E L
Sbjct: 810 RMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKL 860
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 142/266 (53%)
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
+L AR + + WN++I Y+ + + EA+ +F +M++ + P +T+ L
Sbjct: 230 DLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAAL 289
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
+AC + S + +GM + A V KS +V+ N L+ Y + +A +F +M + +
Sbjct: 290 QACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTI 349
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
SWN +++ V+N EA+ ++ +M+D G +PD ++ +++A GN G +H
Sbjct: 350 SWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYA 409
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
++ G + Q+G +L+DMYAK ++ +F +M + +V +W+ +I G AQ+G AL
Sbjct: 410 MKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRAL 469
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACN 342
ELF ++ I + + +L AC+
Sbjct: 470 ELFREVQLEGIDLDVMMISSILLACS 495
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 154/323 (47%), Gaps = 18/323 (5%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRF------CTLSSSKNLTYARS 83
S L+LC SKK L Q+HA + S ++ L + F C + + K
Sbjct: 83 SVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEK------- 135
Query: 84 ILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS 143
L + + WN +I Y + P ++ ++ +M+ GI T+P +LKAC +
Sbjct: 136 -LFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLK 194
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER-SVVSWNVII 202
G +V K G S V+ N++V Y C A ++FD M E+ VVSWN +I
Sbjct: 195 DRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMI 254
Query: 203 TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV 262
+ N EA+ F +M+ P+ T + L AC + + G ++H +++
Sbjct: 255 SAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYY 314
Query: 263 LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM 322
+N + ALI MYA+ G +G A +F M++ + +W++M+ G Q+G EAL+ + M
Sbjct: 315 INVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEM 374
Query: 323 KNSSISPNYVTFLGVLCACNHAG 345
+++ P+ V + ++ A +G
Sbjct: 375 RDAGQKPDLVAVISIIAASARSG 397
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 136/390 (34%), Positives = 212/390 (54%), Gaps = 5/390 (1%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN ++ GY+ ++ +EAV +F +M+ R + P T +L + A + L G QV A
Sbjct: 358 WNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQ 417
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
K+ +D+Y + L+ Y C + A ++FD + E +V WN ++ N EA
Sbjct: 418 KAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFT 477
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
+F KM++ G P + + VLS C +L +LS G+ VH Q+ G + + +G+ALIDMY+
Sbjct: 478 FFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYS 537
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KCG V AR +F M N TW+ MI G AQ+G +EA+ L+ +M S P+ +TF+
Sbjct: 538 KCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVA 597
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
VL AC+H+G+V+ G + F+ M+ HG++P+ HY + D L RAG L EA I MP +
Sbjct: 598 VLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCK 657
Query: 397 PNPIVLRALLSASSIHDAKYQD-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKV 455
+PI+ LLS+ + Y D + L L+P+ S V++AN Y+ +G W+
Sbjct: 658 YDPIIWEVLLSSCRV----YADVSLARRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDA 713
Query: 456 SNVRRFMKNVGLKKMKGMSWVELGGSIHRF 485
VR M + K G SW+E + F
Sbjct: 714 KAVRELMSYNQVVKDPGYSWIEHKNGMQAF 743
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 178/415 (42%), Gaps = 50/415 (12%)
Query: 26 SKARQCLSFLKLCCSKK-HLYQ--IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYAR 82
+K S L+ C KK HL IHA + S L +D + L+ F YA+
Sbjct: 3 TKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEF----------YAK 52
Query: 83 SILCNYVN------DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
CN ++ D +P WN ++ Y + +A +F +M R I
Sbjct: 53 ---CNAIDASRRLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLI 109
Query: 133 PFVLK--ACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
+ + AC + + G + K GLD+++Y N L+ Y CR DA + F D+
Sbjct: 110 SALTRNGACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDV 169
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE--LGNLSL 248
E + VS+ ++ ++ + EA F M D ++ VL C+ G L
Sbjct: 170 PEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGL 229
Query: 249 ------------GKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINV 296
G+ VH I+ G + L +L+DMYAK G + A ++F M E++V
Sbjct: 230 HDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSV 289
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
+W+ MI G Q + +A+E M+ P+ +T++ +L AC +G +E G + F
Sbjct: 290 VSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDG 349
Query: 357 MEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ---PNPIVLRALLSA 408
M P ++T+ ++ + KEA M F+ P+ L +LS+
Sbjct: 350 MS-----SPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSS 399
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 160/385 (41%), Gaps = 46/385 (11%)
Query: 40 SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNN 99
S H Q+H G ++D + L+ + + N+ A I N SV + WN
Sbjct: 238 SDVHGQQVHCLTIKHGFESDLHLNNSLLDM--YAKNGNMDSAEMIFVNMPEVSV-VSWNV 294
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
+I GY + +A+ M+ G +P E TY +L AC + + G Q+
Sbjct: 295 MIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQM-------- 346
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
FD M S+ SWN I++ +N EAV F
Sbjct: 347 ---------------------------FDGMSSPSLSSWNTILSGYSQNENHKEAVKLFR 379
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+M+ PD TT+ ++LS+ + L G+ VH + + L + LI MY+KCG
Sbjct: 380 EMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCG 439
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
V A+ +F R+ E+++ W++M+ GL+ + +EA F M+ + P+ ++ VL
Sbjct: 440 KVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLS 499
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
C + G R H G + D+ ++ G + +A ++ +M N
Sbjct: 500 CCAKLSSLSQG-RQVHSQIAREGYMNDAFVGSALIDMYSKCGDV-DAARWVFDMMLGKNT 557
Query: 400 IVLRALLSASSIHDAKYQDGVGNEV 424
+ ++ + Q+G G+E
Sbjct: 558 VTWNEMIHGYA------QNGCGDEA 576
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 9/174 (5%)
Query: 38 CCSK----KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSV 93
CC+K Q+H+QI G NDA + L+ S ++ AR + + +
Sbjct: 500 CCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDM--YSKCGDVDAARWVFDMMLGKNT 557
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ WN +I GYA + EAV ++ DM G KP T+ VL AC+ ++ G+++
Sbjct: 558 -VTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFN 616
Query: 154 NVTKS-GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVC 205
++ + G++ V ++ G R +A + D M C+ + W V+++ C
Sbjct: 617 SMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSC 670
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%)
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
E T + +L C + GK +H ++ + L LI+ YAKC A+ +R
Sbjct: 1 METKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASR 60
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
LF +M + +++TW+A++ + E+A LF+ M +I
Sbjct: 61 RLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNI 102
>gi|413932452|gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 719
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 144/430 (33%), Positives = 230/430 (53%), Gaps = 7/430 (1%)
Query: 81 ARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACA 140
A+++ N + +V + W ++++ R +A+ VF +M G++P EF + L AC
Sbjct: 287 AKTVFENLESKNV-VSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSACG 345
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
+ G Q+ + K L +D+ +N L+ YG + V + +VSW
Sbjct: 346 SVC---LGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTA 402
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
I+ +N + +AV ++M GF P++ LS+C +L L G+ +H ++ G
Sbjct: 403 AISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLG 462
Query: 261 TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS 320
G ALI+MY+KCG +G ARL F M+ +V +W+++I GLAQHG A ALE FS
Sbjct: 463 CDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFS 522
Query: 321 NMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARA 380
M +S P+ TFL VL CNHAG+V++G +F +M +G+ P HY M D+L R
Sbjct: 523 EMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRN 582
Query: 381 GHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLV 440
G EA I NMPF+P+ ++ + LL++ +H + D +G +L+EL R S + V
Sbjct: 583 GRFAEALRMIENMPFEPDVLIWKTLLASCKLH--RNLD-IGKLAADKLMELSERDSASYV 639
Query: 441 IVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQ 500
+++N YA W VRR M +G+KK G SW+E+ ++ F +G S + IYQ
Sbjct: 640 LMSNLYAMHEEWRDAERVRRRMDEIGVKKDAGWSWIEVKNEVNTFVAGDMSHPDSTSIYQ 699
Query: 501 ILETLNLHMK 510
+L L + M+
Sbjct: 700 MLAELLVVMQ 709
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 116/247 (46%), Gaps = 4/247 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W I G + RP A +F DM G+ P +F L ACA L G QV +
Sbjct: 102 VAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACNAALAACAAAGALGLGEQVHSL 161
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
++G +D + + L+ Y C R A +VF M VV + +++ N L A
Sbjct: 162 AVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGELARA 221
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
V +M G +P+E TM +L+ C +G+ +H +++ + TALID
Sbjct: 222 VDVLCQMTRQGLQPNEHTMTSMLAECPR----GIGEQIHGYMLKVMGSQSVYASTALIDF 277
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y++ G G A+ +F +E NV +W +M+ + G ++AL +FS M + + PN F
Sbjct: 278 YSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAF 337
Query: 335 LGVLCAC 341
L AC
Sbjct: 338 SIALSAC 344
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 126/287 (43%), Gaps = 17/287 (5%)
Query: 109 RPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNN 168
+PRE V + + K +PT P +L + NV+ + DV +
Sbjct: 23 QPREMVALHLHAK----QPT----PRLLPVPPSHARTRTPTAAAVNVSHAAPPPDVVLDC 74
Query: 169 NLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEP 228
+ R DA +FD M ++VV+W I+ C N A F M + G P
Sbjct: 75 KRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAP 134
Query: 229 DETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLF 288
++ L+AC G L LG+ VH + G + +G+ LI++Y++CG++ A +F
Sbjct: 135 NDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVF 194
Query: 289 SRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVE 348
RME +V +++++ L ++G A+++ M + PN T +L C G+ E
Sbjct: 195 RRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECPR-GIGE 253
Query: 349 DGYRYFHEMEHVHGIKPMRIHYHTMA--DILARAGHLKEAYTFIMNM 393
+ Y M V G + + Y + A D +R G A T N+
Sbjct: 254 QIHGY---MLKVMGSQSV---YASTALIDFYSRYGDFGTAKTVFENL 294
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 92/238 (38%), Gaps = 62/238 (26%)
Query: 262 VLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSN 321
VL+C+ +D K G +G A LF RM NV W+ I G ++G E A +F++
Sbjct: 71 VLDCKR----LDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFAD 126
Query: 322 MKNSSISPN---------------------YVTFLGV---------LCAC-----NHAGM 346
M S ++PN V L V + +C + G
Sbjct: 127 MLESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGS 186
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP---FQPNPIVLR 403
+ F ME P + Y ++ L R G L A + M QPN +
Sbjct: 187 LRAAEEVFRRME-----APDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMT 241
Query: 404 ALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQN------LVIVANKYAEVGMWEKV 455
++L A+ G+G ++ +L++ GSQ+ L+ ++Y + G + V
Sbjct: 242 SML-------AECPRGIGEQIHGYMLKV--MGSQSVYASTALIDFYSRYGDFGTAKTV 290
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 150/475 (31%), Positives = 239/475 (50%), Gaps = 39/475 (8%)
Query: 75 SKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPF 134
+ +L AR + V +++ WN +I GY +EA+ + M+ GI+ + TY
Sbjct: 236 NDDLNGAREVFEAMV-ENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTT 294
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSD----VYTNNNLVRFYGSCRRKRDACKVFDDM 190
++ ACA + G Q+ A + K+ L+ + + +N L+ Y + +A K+F M
Sbjct: 295 IISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAM 354
Query: 191 CERSVVSWN-------------------------------VIITVCVENLWLGEAVGYFV 219
R++++WN V+I+ +N + E + F
Sbjct: 355 PVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFK 414
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+M+ GFEP + L+AC+ LG L G+ +H QL+ G + +G A+I MYAKCG
Sbjct: 415 QMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCG 474
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
V A +F M +++ +W++MI L QHG+ +A+ELF M + P+ +TFL VL
Sbjct: 475 VVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLT 534
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
AC+HAG+VE G YF+ M +GI P HY M D+ RAG A I +MP +P
Sbjct: 535 ACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGA 594
Query: 400 IVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVR 459
V ALL+ IH +G E +L +L P+ V+++N YA+VG W V+ VR
Sbjct: 595 PVWEALLAGCRIHGNM---DLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVR 651
Query: 460 RFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ M++ ++K SW+E+ +H F D E+ +Y+ LE L L MK L +
Sbjct: 652 KLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGY 706
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 171/411 (41%), Gaps = 91/411 (22%)
Query: 66 LVRFCTLSSSKNLTYARSILCN---YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKR 122
+ +C L NL R I Y+ DSV +N +I GYA + A+ +F M+R
Sbjct: 86 ITAYCALG---NLELGREIFNGTPLYMRDSVF--YNAMITGYAHNGDGHSALELFRAMRR 140
Query: 123 RGIKPTEFTYPFVLKACAEISGLNEGM--QVQANVTKSGL---DSDVYTNNNLVRFYGS- 176
+P +FT+ VL A G NE Q+ V K+G+ S V N L+ Y
Sbjct: 141 DDFRPDDFTFTSVLSALVLFVG-NEQQCGQMHCAVVKTGMGCVSSSVL--NALLSVYVKR 197
Query: 177 -------CRRKRDACKVFDDMCERSVVSWNVIIT----------------VCVENL---W 210
C A K+FD+M +R ++W +IT VENL W
Sbjct: 198 ASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAW 257
Query: 211 ------------LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
EA+ KM+ LG + D+ T ++SAC +G+ +GK +H +++
Sbjct: 258 NAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILK 317
Query: 259 RGTVLN----CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA------------- 301
N + ALI +Y K V AR +F M N+ TW+A
Sbjct: 318 NELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEE 377
Query: 302 ------------------MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
MI GLAQ+G+ +E L+LF M+ P F G L AC+
Sbjct: 378 AKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSV 437
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
G +E+G + ++ H+ + + + M + A+ G ++ A + + MP
Sbjct: 438 LGALENGRQLHAQLVHLGYESSLSVG-NAMISMYAKCGVVEAAESVFVTMP 487
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 145/465 (31%), Positives = 237/465 (50%), Gaps = 12/465 (2%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H + +GL +D ++ ++ + + K + L V + + +N +I G+
Sbjct: 234 VHGCVIKAGLDSDVFLVSAMI---DMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCR 290
Query: 107 SDR------PREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGL 160
++ EA+ ++ +++ RG++PTEFT+ VL+AC L G Q+ V K
Sbjct: 291 TETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTF 350
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK 220
D + + L+ Y + D + F + +V+W +++ CV+N +A+ F +
Sbjct: 351 QEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHE 410
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
G +PD T+ V++AC L G+ + + G +G + + MYA+ G
Sbjct: 411 SLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGD 470
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
V A F ME +V +WSA+I AQHG A +AL F M ++ + PN +TFLGVL A
Sbjct: 471 VDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTA 530
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPI 400
C+H G+V++G RY+ M +G+ P H + D+L RAG L +A FI N F +P+
Sbjct: 531 CSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPV 590
Query: 401 VLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRR 460
+ R+LL++ IH + G V R++ELEP S + VI+ N Y + G S R
Sbjct: 591 IWRSLLASCRIHRDLER---GQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRD 647
Query: 461 FMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
MK G+KK G+SW+EL +H F +G S E + IY LE +
Sbjct: 648 LMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEM 692
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 130/272 (47%), Gaps = 12/272 (4%)
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P + +N LI Y+ ++ +R G+ F+Y L AC+ L
Sbjct: 67 DEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLR 126
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G V A GL S V+ +N+LV Y C +A +VFD ER VSWN +++ V
Sbjct: 127 AGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYV 186
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGN--LSLGKWVHLQLIERGTVLN 264
E V F M+ G + + V+ C+ G+ + + + VH +I+ G +
Sbjct: 187 RAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSD 246
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ------HGYAEEALEL 318
L +A+IDMYAK GA+ A LF ++E NV ++ MI G + A EAL L
Sbjct: 247 VFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTL 306
Query: 319 FSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
+S +++ + P TF VL ACN AG +E G
Sbjct: 307 YSEVQSRGMQPTEFTFSSVLRACNLAGYLEFG 338
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 122/280 (43%), Gaps = 8/280 (2%)
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
+ ++ N L+ Y A ++ D+M R+ VS+N++I ++ +
Sbjct: 41 ASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARA 100
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
+ G + D + L+AC+ G+L G+ VH I G + +L+ MY+KCG +
Sbjct: 101 RRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEM 160
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
G AR +F EE + +W++++ G + G EE + +F+ M+ + N V+ C
Sbjct: 161 GEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCC 220
Query: 342 NHAGMVEDGYRYFHEMEH----VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
+ G DG E H G+ M D+ A+ G L EA ++ +P
Sbjct: 221 SGRG---DGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQ-EP 276
Query: 398 NPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
N ++ +++ + V +E E++ RG Q
Sbjct: 277 NVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQ 316
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 145/431 (33%), Positives = 240/431 (55%), Gaps = 8/431 (1%)
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
+L+YA + C+ + +V WN LI GY+ S PR ++ + MK G+ P FT +L
Sbjct: 443 SLSYAHRVFCSIRSKTVN-SWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLL 501
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
AC++I L G +V + ++ L+ D + +L+ Y C A +FD M ++++V
Sbjct: 502 SACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLV 561
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
SWN ++ ++N + A+ F +M G +P E +M+ V AC+ L +L LG+ H
Sbjct: 562 SWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYA 621
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
++ N + ++IDMYAK G+V + +F+ ++E +V +W+AM++G HG A+EA+
Sbjct: 622 LKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAI 681
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
+LF M+ + P+ +TFLGVL ACNH+G+V +G Y +M+ + G+ P HY + D+
Sbjct: 682 KLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDM 741
Query: 377 LARAGHLKEAYTFIM-NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
L RAG L EA M +P + LLS+ IH +G ++ +L EP
Sbjct: 742 LVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHK---NLEMGEKIAAKLFVSEPEK 798
Query: 436 SQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG---YDSQ 492
+N V+++N YA G W++V VR+ MK + L+K G SW+EL G + F +G D
Sbjct: 799 PENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELNGKVFSFVAGESSLDGF 858
Query: 493 VELAGIYQILE 503
E+ ++ +LE
Sbjct: 859 EEIKSLWSVLE 869
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 153/317 (48%), Gaps = 30/317 (9%)
Query: 52 QVSGLQNDAQILKELVRFCTLS---SSKNLTYARSI----LCNYVNDSVPI--------- 95
Q SG + D Q+ +++ + + S S+ ++ R I +C +DS +
Sbjct: 89 QASGRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNL 148
Query: 96 -PWNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
WN +I Y+ ++ + +F+ M G+ P FT+P V+KACA +S + G+ V
Sbjct: 149 FQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHG 208
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN----- 208
V K+ L DV+ +N LV FYG+ DA +VF M ER++VSWN +I V +N
Sbjct: 209 LVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEE 268
Query: 209 --LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
L LG+ + K ++ F PD T+ VL C + +GK VH ++
Sbjct: 269 CFLLLGQMME---KDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVV 325
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM--KN 324
+ AL+DMY+KCG + A+++F NV +W+ M+ G + G + +L M
Sbjct: 326 VNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGG 385
Query: 325 SSISPNYVTFLGVLCAC 341
+ + VT L + C
Sbjct: 386 GDLRADEVTILNAVPVC 402
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 119/283 (42%), Gaps = 28/283 (9%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRR----GIKPTEFTYPFVLKACAEISGLNEGMQ 150
+ WN++IR ++ + E + M + P T VL CA + G
Sbjct: 251 VSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKG 310
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
V K LD +V NN L+ Y C DA +F ++VVSWN ++
Sbjct: 311 VHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGF----- 365
Query: 211 LGEAVGYFVKMKDL---------GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGT 261
A G K DL DE T+L + C E L K +H +++
Sbjct: 366 --SAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEF 423
Query: 262 VLNCQL-GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS 320
V N +L A + YAKCG++ A +F + V +W+A+I G +Q +L+ +
Sbjct: 424 VHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYF 483
Query: 321 NMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
MK+S + P+ T +L AC+ ++ G + VHG+
Sbjct: 484 QMKSSGLLPDLFTVCSLLSACSQIKSLKLG-------KEVHGL 519
>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 136/390 (34%), Positives = 212/390 (54%), Gaps = 5/390 (1%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN ++ GY+ ++ +EAV +F +M+ R + P T +L + A + L G QV A
Sbjct: 387 WNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQ 446
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
K+ +D+Y + L+ Y C + A ++FD + E +V WN ++ N EA
Sbjct: 447 KAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFT 506
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
+F KM++ G P + + VLS C +L +LS G+ VH Q+ G + + +G+ALIDMY+
Sbjct: 507 FFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYS 566
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KCG V AR +F M N TW+ MI G AQ+G +EA+ L+ +M S P+ +TF+
Sbjct: 567 KCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVA 626
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
VL AC+H+G+V+ G + F+ M+ HG++P+ HY + D L RAG L EA I MP +
Sbjct: 627 VLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCK 686
Query: 397 PNPIVLRALLSASSIHDAKYQD-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKV 455
+PI+ LLS+ + Y D + L L+P+ S V++AN Y+ +G W+
Sbjct: 687 YDPIIWEVLLSSCRV----YADVSLARRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDA 742
Query: 456 SNVRRFMKNVGLKKMKGMSWVELGGSIHRF 485
VR M + K G SW+E + F
Sbjct: 743 KAVRELMSYNQVVKDPGYSWIEHKNGMQAF 772
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 187/431 (43%), Gaps = 53/431 (12%)
Query: 26 SKARQCLSFLKLCCSKK-HLYQ--IHAQIQVSGLQNDAQILKELVRF---C-TLSSSKNL 78
+K S L+ C KK HL IHA + S L +D + L+ F C + +S+ L
Sbjct: 3 TKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRL 62
Query: 79 --------TYA-RSILCNYVNDS-----------VP----IPWNNLIRGYAWSDRPREAV 114
Y +IL Y S +P + WN LI + ++A+
Sbjct: 63 FDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKAL 122
Query: 115 WVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFY 174
V+ M R G PT FT VL AC + + G + K GLD+++Y N L+ Y
Sbjct: 123 GVYYRMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMY 182
Query: 175 GSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTML 234
CR DA + F D+ E + VS+ ++ ++ + EA F M D ++
Sbjct: 183 AKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLS 242
Query: 235 VVLSACTE--LGNLSL------------GKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
VL C+ G L G+ VH I+ G + L +L+DMYAK G
Sbjct: 243 SVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGN 302
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
+ A ++F M E++V +W+ MI G Q + +A+E M+ P+ +T++ +L A
Sbjct: 303 MDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVA 362
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ---P 397
C +G +E G + F M P ++T+ ++ + KEA M F+ P
Sbjct: 363 CIKSGDIEAGRQMFDGMS-----SPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHP 417
Query: 398 NPIVLRALLSA 408
+ L +LS+
Sbjct: 418 DRTTLAIILSS 428
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 160/385 (41%), Gaps = 46/385 (11%)
Query: 40 SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNN 99
S H Q+H G ++D + L+ + + N+ A I N SV + WN
Sbjct: 267 SDVHGQQVHCLTIKHGFESDLHLNNSLLDM--YAKNGNMDSAEMIFVNMPEVSV-VSWNV 323
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
+I GY + +A+ M+ G +P E TY +L AC + + G Q+
Sbjct: 324 MIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQM-------- 375
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
FD M S+ SWN I++ +N EAV F
Sbjct: 376 ---------------------------FDGMSSPSLSSWNTILSGYSQNENHKEAVKLFR 408
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+M+ PD TT+ ++LS+ + L G+ VH + + L + LI MY+KCG
Sbjct: 409 EMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCG 468
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
V A+ +F R+ E+++ W++M+ GL+ + +EA F M+ + P+ ++ VL
Sbjct: 469 KVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLS 528
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
C + G R H G + D+ ++ G + +A ++ +M N
Sbjct: 529 CCAKLSSLSQG-RQVHSQIAREGYMNDAFVGSALIDMYSKCGDV-DAARWVFDMMLGKNT 586
Query: 400 IVLRALLSASSIHDAKYQDGVGNEV 424
+ ++ + Q+G G+E
Sbjct: 587 VTWNEMIHGYA------QNGCGDEA 605
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 9/174 (5%)
Query: 38 CCSK----KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSV 93
CC+K Q+H+QI G NDA + L+ S ++ AR + + +
Sbjct: 529 CCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDM--YSKCGDVDAARWVFDMMLGKNT 586
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ WN +I GYA + EAV ++ DM G KP T+ VL AC+ ++ G+++
Sbjct: 587 -VTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFN 645
Query: 154 NVTKS-GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVC 205
++ + G++ V ++ G R +A + D M C+ + W V+++ C
Sbjct: 646 SMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSC 699
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 31/157 (19%)
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
E T + +L C + GK +H ++ + L LI+ YAKC A+ +R
Sbjct: 2 ETKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRR 61
Query: 287 LFSRMEEINVWTWSA-------------------------------MILGLAQHGYAEEA 315
LF +M + +++TW+A +I L ++G+ ++A
Sbjct: 62 LFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKA 121
Query: 316 LELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR 352
L ++ M P + T VL AC VE G R
Sbjct: 122 LGVYYRMSREGFVPTHFTLASVLSACGALVDVECGRR 158
>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g40410, mitochondrial; Flags: Precursor
gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 608
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 229/427 (53%), Gaps = 11/427 (2%)
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDM--KRRGIKPTEFTYPFVLKACAEISG 144
D +P + WN+LI GY+ + V M G +P E T+ ++ AC
Sbjct: 90 DEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGS 149
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
EG + V K G+ +V N + +YG +CK+F+D+ +++VSWN +I +
Sbjct: 150 KEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVI 209
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
++N + + YF + +G EPD+ T L VL +C ++G + L + +H ++ G N
Sbjct: 210 HLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGN 269
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+ TAL+D+Y+K G + + +F + + W+AM+ A HG+ +A++ F M +
Sbjct: 270 KCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVH 329
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
ISP++VTF +L AC+H+G+VE+G YF M + I P HY M D+L R+G L+
Sbjct: 330 YGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQ 389
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG-VGNEVRRRLLELEPRGSQNLVIVA 443
+AY I MP +P+ V ALL A + Y+D +G + RL ELEPR +N V+++
Sbjct: 390 DAYGLIKEMPMEPSSGVWGALLGACRV----YKDTQLGTKAAERLFELEPRDGRNYVMLS 445
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N Y+ G+W+ S +R MK GL + G S++E G IH+F G S E I + L+
Sbjct: 446 NIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLK 505
Query: 504 TLNLHMK 510
+ MK
Sbjct: 506 EIRKKMK 512
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 142/302 (47%), Gaps = 14/302 (4%)
Query: 121 KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQ------ANVTKSGLDSDVYTNNNLVRFY 174
+RR + + F + + I+ + + ++ V KS + + LV Y
Sbjct: 17 RRRFLSQSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCY 76
Query: 175 GSCRRKRDAC--KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM--KDLGFEPDE 230
R D C K+FD+M ER +VSWN +I+ +LG+ +M ++GF P+E
Sbjct: 77 --LRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNE 134
Query: 231 TTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSR 290
T L ++SAC G+ G+ +H +++ G + ++ A I+ Y K G + + LF
Sbjct: 135 VTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFED 194
Query: 291 MEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
+ N+ +W+ MI+ Q+G AE+ L F+ + P+ TFL VL +C G+V
Sbjct: 195 LSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLA 254
Query: 351 YRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASS 410
+ H + G + + D+ ++ G L+++ T + P+ + A+L+A +
Sbjct: 255 -QGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEIT-SPDSMAWTAMLAAYA 312
Query: 411 IH 412
H
Sbjct: 313 TH 314
>gi|413943774|gb|AFW76423.1| hypothetical protein ZEAMMB73_944105 [Zea mays]
Length = 446
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 150/428 (35%), Positives = 220/428 (51%), Gaps = 41/428 (9%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG-LDSDVYTNNNLVRFYGSCR 178
M G P E T V+ ACA ++ EG QV A++ K L D+ NN LV Y C
Sbjct: 1 MMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCG 60
Query: 179 RK-------------------------------RDACKVFDDMCERSVVSWNVIITVCVE 207
R DA VF M E++V++WNV+I +
Sbjct: 61 RTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQ 120
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ- 266
N EA+ FV++K P T VL+AC + L LG+ H+ +++ G +
Sbjct: 121 NGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGP 180
Query: 267 -----LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSN 321
+G +L+DMY K G++ +F RM + +W+AMI+G AQ+G A++AL LF
Sbjct: 181 ESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFER 240
Query: 322 MKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAG 381
M S+ +P+ VT +GVL AC H+G+V++G R+FH M HGI P R HY M D+L RAG
Sbjct: 241 MLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAG 300
Query: 382 HLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVI 441
HLKEA I +MP +P+ ++ +LL A +H +G RL EL+P S V+
Sbjct: 301 HLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVE---LGERTAGRLFELDPENSGPYVL 357
Query: 442 VANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQI 501
++N YAE+G W V VRR MK+ G+ K G SW+E+G ++ F + + I+
Sbjct: 358 LSNMYAEMGKWADVFRVRRSMKDRGVSKQPGCSWIEIGSKMNVFLARDNRHPCRNEIHST 417
Query: 502 LETLNLHM 509
L + + M
Sbjct: 418 LRIIQMEM 425
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 118/260 (45%), Gaps = 9/260 (3%)
Query: 62 ILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMK 121
++ E + S N+ A+ + V +V I WN LI YA + EA+ +F+ +K
Sbjct: 77 VVSETSILAGYAKSANVEDAQVVFSQMVEKNV-IAWNVLIAAYAQNGEEEEAIRLFVQLK 135
Query: 122 RRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGL------DSDVYTNNNLVRFYG 175
R I PT +TY VL AC I+ L G Q +V K G +SDV+ N+LV Y
Sbjct: 136 RDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYL 195
Query: 176 SCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLV 235
D KVF+ M R VSWN +I +N +A+ F +M PD TM+
Sbjct: 196 KTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIG 255
Query: 236 VLSACTELGNLSLG-KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM-EE 293
VLSAC G + G + H + G + T ++D+ + G + A L M E
Sbjct: 256 VLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTE 315
Query: 294 INVWTWSAMILGLAQHGYAE 313
+ W++++ H E
Sbjct: 316 PDSVLWASLLGACRLHKNVE 335
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 155/479 (32%), Positives = 239/479 (49%), Gaps = 43/479 (8%)
Query: 75 SKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPF 134
+ +L AR +L + + + + WN +I GY EA F M GI+ E+TY
Sbjct: 230 NDDLVAARELL-DGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTS 288
Query: 135 VLKACA----EISGLNEGMQVQANVTKSGLDSD----VYTNNNLVRFYGSCRRKRDACKV 186
++ AC ++ N G QV + ++ ++ + NN L+ FY R +A +V
Sbjct: 289 LISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRV 348
Query: 187 FD-------------------------------DMCERSVVSWNVIITVCVENLWLGEAV 215
FD +M ER+V++W V+I+ +N + E +
Sbjct: 349 FDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGL 408
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY 275
F +MK G EP + ++AC+ LG+L G+ +H Q+I G G ALI MY
Sbjct: 409 KLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMY 468
Query: 276 AKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFL 335
++CG V A +F M ++ +W+AMI LAQHG+ +A+ELF M I P+ +TFL
Sbjct: 469 SRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFL 528
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPF 395
+L ACNHAG++++G YF M +GI P HY + D+L RAG +A + I +MPF
Sbjct: 529 TILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPF 588
Query: 396 QPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKV 455
+ + ALL+ IH +G + RLLEL P +I++N YA +G W++V
Sbjct: 589 EAGAPIWEALLAGCRIHGNM---ELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEV 645
Query: 456 SNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ VR M+ G+KK G SWVE+ +H F E+ +Y L+ L MK L +
Sbjct: 646 ARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAVYTYLQQLVNEMKKLGY 704
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 115/489 (23%), Positives = 186/489 (38%), Gaps = 136/489 (27%)
Query: 47 IHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILCNYVNDSVPIP--------- 96
+HA I SG + + IL L+ +C S N+TYAR + D +P P
Sbjct: 27 VHAHILTSGFKPNTFILNRLINIYC---KSSNITYARKLF-----DKIPKPDIVARTTLL 78
Query: 97 ----------------------------WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPT 128
+N +I Y+ + A+ +F+ MKR G P
Sbjct: 79 SAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPD 138
Query: 129 EFTYPFVLKACAEISGLNEGMQ-VQANVTKSGLDSDVYTNNNLVRFYGSCRRK------- 180
FT+ VL A + I+ Q + V K G N L+ Y C
Sbjct: 139 PFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQ 198
Query: 181 --RDACKVFDDMCERSV---------------------------------VSWNVIITVC 205
A KVFD+ + + V+WN +I+
Sbjct: 199 LMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGY 258
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC----TELGNLSLGKWVH----LQLI 257
V EA F +M +G + DE T ++SAC ++G + G+ VH ++
Sbjct: 259 VRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVV 318
Query: 258 ERGTVLNCQLGTALIDMYAK--------------------------CGAVGCARL----- 286
E + ALI Y K G V R+
Sbjct: 319 EPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANS 378
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
+FS M E NV TW+ MI GLAQ+G+ EE L+LF+ MK+ + P F G + AC+ G
Sbjct: 379 IFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGS 438
Query: 347 VEDGYRYFHE---MEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
+++G + + + H G+ + + + +R G ++ A + + MP+ + +
Sbjct: 439 LDNGQQIHSQVIRLGHDSGLSAG----NALITMYSRCGVVESAESVFLTMPY-VDSVSWN 493
Query: 404 ALLSASSIH 412
A+++A + H
Sbjct: 494 AMIAALAQH 502
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 141/423 (33%), Positives = 224/423 (52%), Gaps = 6/423 (1%)
Query: 95 IPWNNLIRGY--AWSDRPREAVWVFIDMK-RRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
+ W L+ GY REA+ +F +M + G+ P FT+ VLKACA + + G QV
Sbjct: 329 MSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQV 388
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
K GL + N LV Y R A K FD + E+++VS V+ V++ L
Sbjct: 389 HGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNL 448
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
+++ +G T +LS +G + G+ +H +++ G + + AL
Sbjct: 449 NSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNAL 508
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
I MY+KCG A +F+ ME+ NV TW+++I G A+HG+A +ALELF NM + + PN
Sbjct: 509 ISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPND 568
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
VT++ VL AC+H G++++ +++F M HGI P HY M D+L R+G L EA FI
Sbjct: 569 VTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFIN 628
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGM 451
+MPF + +V R L + +H +G + +LE EP ++++N YA G
Sbjct: 629 SMPFDADALVWRTFLGSCRVH---RNTKLGEHAAKMILEREPHDPATYILLSNLYATEGR 685
Query: 452 WEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
WE V+ +R+ MK + K G SW+E+ +H+F+ G + IY+ L+ L L +K
Sbjct: 686 WEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELALKIKN 745
Query: 512 LNF 514
+ +
Sbjct: 746 VGY 748
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 128/422 (30%), Positives = 209/422 (49%), Gaps = 35/422 (8%)
Query: 34 FLKLCCSKK--HLYQI-HAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
LK C K HL ++ H ++ S L D +L L+ S S + A SI + N
Sbjct: 58 LLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITL--YSKSNDPITAFSIFQSMEN 115
Query: 91 DSVPI-PWNNLIRGYAWSDRPREAVWVFIDMK-RRGIKPTEFTYPFVLKACAEISGLNEG 148
+ ++++I +A + +AV +F + + G+ P E+ + V++AC + G
Sbjct: 116 SKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTG 175
Query: 149 MQVQANVTKSG-LDSDVYTNNNLVRFY---GSCRRKRDACKVFDDMCERSVVSWNVIITV 204
+ + V K+G DS V L+ + S A KVFD M E++VV+W ++IT
Sbjct: 176 LCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITR 235
Query: 205 CVENLWLGEAVGYFVKM-KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
+ + EA+ F++M G+ PD T+ ++S C E+ LSLGK +H +I G VL
Sbjct: 236 LAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVL 295
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ--HGYAEEALELFSN 321
+ +G +L+DMYAKCG V AR +F M E NV +W+A++ G + GY EA+ +FSN
Sbjct: 296 DLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSN 355
Query: 322 M-KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH------GIKPMRIHYHTMA 374
M ++PN TF GVL AC A + + F E VH G+ + + +
Sbjct: 356 MLLQGGVAPNCFTFSGVLKAC--ASLPD-----FDFGEQVHGQTIKLGLSAIDCVGNGLV 408
Query: 375 DILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPR 434
+ A++G ++ A ++ F+ N L+S + + D +D N + E+E
Sbjct: 409 SVYAKSGRMESARK-CFDVLFEKN------LVSETVVDDTNVKDFNLNSEQDLDREVEYV 461
Query: 435 GS 436
GS
Sbjct: 462 GS 463
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 10/220 (4%)
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
T +LK C + G + +T S L D N+L+ Y A +F M
Sbjct: 54 TSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSM 113
Query: 191 --CERSVVSWNVIITVCVENLWLGEAVGYFVK--MKDLGFEPDETTMLVVLSACTELGNL 246
+R VVS++ II+ N +AV F + ++D G P+E V+ AC + G
Sbjct: 114 ENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQD-GVYPNEYCFTAVIRACLKGGFF 172
Query: 247 SLGKWVHLQLIERGTV-LNCQLGTALIDMYAKCGAVG---CARLLFSRMEEINVWTWSAM 302
G + +++ G + +G LIDM+ K ++ AR +F +M E NV TW+ M
Sbjct: 173 KTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLM 232
Query: 303 ILGLAQHGYAEEALELFSNMKNSS-ISPNYVTFLGVLCAC 341
I LAQ+GY +EA++LF M SS P+ T G++ C
Sbjct: 233 ITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVC 272
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIHA + G + D + L+ + +K A + N + D I W ++I G+A
Sbjct: 488 QIHAMVVKIGFRTDLSVNNALISMYSKCGNKE---AALQVFNDMEDCNVITWTSIINGFA 544
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
+A+ +F +M G+KP + TY VL AC+ + ++E
Sbjct: 545 KHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEA 587
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 3/126 (2%)
Query: 232 TMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM 291
T ++L C N LGK +H +L L+ L +LI +Y+K A +F M
Sbjct: 54 TSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSM 113
Query: 292 E--EINVWTWSAMILGLAQHGYAEEALELFSN-MKNSSISPNYVTFLGVLCACNHAGMVE 348
E + +V ++S++I A + +A+E+F + + PN F V+ AC G +
Sbjct: 114 ENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFK 173
Query: 349 DGYRYF 354
G F
Sbjct: 174 TGLCLF 179
>gi|357138657|ref|XP_003570906.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Brachypodium distachyon]
Length = 608
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 149/433 (34%), Positives = 234/433 (54%), Gaps = 11/433 (2%)
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEIS 143
V D +P + WN +++ Y + + +F DM G + P E T VL AC +
Sbjct: 173 VFDGIPRRDVVSWNAMMKAYERAGMAADVARMFRDMIDEGAVAPNEVTVAVVLAACRDAG 232
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
L G ++ V + ++ + LV Y C +A +VFD + + VV+WN +IT
Sbjct: 233 DLVLGRWLEEWVRSAEIEVGSLVGSALVGMYEKCGEMTEARRVFDGIAHKDVVAWNAMIT 292
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
+N EA+ F M+ G PD+ T++ VLSAC +G L LG + RG
Sbjct: 293 GYAQNGMSKEAIALFHSMRQEGASPDKITLVGVLSACAAVGALELGTELDAYASHRGLYG 352
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
N +GTAL+DMY+KCG + A +F ++ N TW+A+I GLA +G EA+ F M+
Sbjct: 353 NVYVGTALVDMYSKCGDLDKAVQVFGKLPCKNEATWNALICGLAFNGRGHEAIRQFEVMR 412
Query: 324 N-SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGH 382
N + P+ +TF+GVL AC HAG+++DG R+F+ + I P HY M D+LARAGH
Sbjct: 413 NEEGLRPDDITFIGVLSACVHAGLLKDGRRWFNSLTSEFQIIPKIEHYSCMVDLLARAGH 472
Query: 383 LKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD-GVGNEVRRRLLELEPRGSQNLVI 441
L+EA+ F+ +P + + ++L ALL+A K ++ V V R+++LEP S N V+
Sbjct: 473 LEEAWDFVEKIPGKADAVMLGALLAACR----KCKNVEVSERVINRIMQLEPSNSWNYVV 528
Query: 442 VANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQI 501
+ YA + + +R M+ G+ K+ G SWVE+ G + FY+G +SQ +YQ+
Sbjct: 529 SSKIYASSDRLDDSAKMRGLMRERGVSKIPGCSWVEVSGKVLEFYAGDESQHGADDMYQL 588
Query: 502 LETLNLHMKVLNF 514
+ L M++ +
Sbjct: 589 HDMLIDEMRLEGY 601
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 153/306 (50%), Gaps = 7/306 (2%)
Query: 94 PIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
P P +N +R +A S RPR A+ +F+ M R ++P +T PF+L A A
Sbjct: 78 PAPTAFSYNVTLRFFA-STRPRTALRLFLRMLRAALRPDAYTLPFLLLAAARAPEPPFAR 136
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
A + + GL + +T ++LV Y + A +VFD + R VVSWN ++
Sbjct: 137 SAHALLCRLGLQAHDHTVHSLVTMYSNLGDPLAARRVFDGIPRRDVVSWNAMMKAYERAG 196
Query: 210 WLGEAVGYFVKMKDLG-FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+ F M D G P+E T+ VVL+AC + G+L LG+W+ + + +G
Sbjct: 197 MAADVARMFRDMIDEGAVAPNEVTVAVVLAACRDAGDLVLGRWLEEWVRSAEIEVGSLVG 256
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
+AL+ MY KCG + AR +F + +V W+AMI G AQ+G ++EA+ LF +M+ S
Sbjct: 257 SALVGMYEKCGEMTEARRVFDGIAHKDVVAWNAMITGYAQNGMSKEAIALFHSMRQEGAS 316
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
P+ +T +GVL AC G +E G H G+ + D+ ++ G L +A
Sbjct: 317 PDKITLVGVLSACAAVGALELGTELDAYASH-RGLYGNVYVGTALVDMYSKCGDLDKAVQ 375
Query: 389 FIMNMP 394
+P
Sbjct: 376 VFGKLP 381
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 217/416 (52%), Gaps = 3/416 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I GY S +A+ +F M R G +EFT + ACA +NE Q+
Sbjct: 124 VSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTI 183
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K LDS+ + ++ Y C +DAC VF+ M ER++V+W+ + V+N EA
Sbjct: 184 ALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEA 243
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F + G E E T+ +LSAC L G +H +++ G N + +L+D+
Sbjct: 244 LHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDV 303
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YA+CG + A LF+ ME NV W+AMI ++H ++ EA+ LF M+ I PN VT+
Sbjct: 304 YARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTY 363
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
L VL C+HAG+VE G YF + ++P +HY M D+L R+G EA+ + MP
Sbjct: 364 LSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMP 423
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
F+P + +LL + ++ + E +L +LEP N V+++N YA G WE
Sbjct: 424 FEPTASMWGSLLGSCRNYNNIRLARIAAE---QLFQLEPDNGGNHVLLSNVYAASGNWEN 480
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
V R+++K+ G KK G SW+E G +H F G + IY LE + M+
Sbjct: 481 VLMARKYLKDSGAKKEMGRSWIEAKGKVHVFVVGERKHPRITDIYNKLEEIYHEMR 536
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 157/465 (33%), Positives = 237/465 (50%), Gaps = 13/465 (2%)
Query: 55 GLQNDAQILKE-LVRFCTLSSSKNLTYARSILCN---YVNDSV----PIPWNNLIRGYAW 106
G+Q ++K+ +V F ++ +S YA++ + +V +S I W+ +I GY+
Sbjct: 239 GVQVHGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQ 298
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+ AV +F M G PTEFT VL AC+++ L EG Q + K G + VY
Sbjct: 299 NGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYV 358
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
+ LV Y C DA + F+ E +V W ++T V+N +A+ + +M G
Sbjct: 359 KSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGV 418
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
P+ T+ +L AC L L GK +H Q+++ G L +G+AL MY+KCG + +
Sbjct: 419 FPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMV 478
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
+F RM +V W+++I G +Q+G +A+ LF MK +P+ VTF+ VLCAC+H G+
Sbjct: 479 VFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCACSHMGL 538
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALL 406
V+ G+ YF M +G+ P HY M DIL+RAG L EA FI ++ + R +L
Sbjct: 539 VDRGWTYFRSMIKDYGLTPRLDHYACMVDILSRAGMLSEAKDFIESITIDHGTCLWRIVL 598
Query: 407 SA-SSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
A S+ D VG +L++L S ++++N YA W V VR MK V
Sbjct: 599 GACRSLRDFD----VGAYAGEKLMDLGTGDSAAYILLSNIYAAQRKWNDVERVRYLMKLV 654
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
G+ K G SWVEL +H F G + I L L HMK
Sbjct: 655 GVSKDPGCSWVELNSRVHVFVVGEQQHPDAEIINTELRRLGKHMK 699
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 180/384 (46%), Gaps = 25/384 (6%)
Query: 70 CTLSSSKNLTYARSILCN------------YVNDSVP----IPWNNLIRGYAWSDRPREA 113
C L S+ + + + L N V D +P + W ++ GYA +EA
Sbjct: 144 CKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEA 203
Query: 114 VWVFIDMKRR-GIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVR 172
+F M + EF VL A + GL G+QV V K G+ V N+LV
Sbjct: 204 FELFRQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVT 263
Query: 173 FYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETT 232
Y A VF+ ER+ ++W+ +IT +N AV F +M GF P E T
Sbjct: 264 MYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFT 323
Query: 233 MLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME 292
++ VL+AC+++G L GK H +++ G + + +AL+DMYAKCG +G A+ F++
Sbjct: 324 LVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFS 383
Query: 293 EINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR 352
E+++ W+AM+ G Q+G E+AL L++ M + PN +T +L AC +E G +
Sbjct: 384 ELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPG-K 442
Query: 353 YFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
H G ++ + ++ G+L++ MP R +++ +SI
Sbjct: 443 QLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPH-------RDVIAWNSII 495
Query: 413 DAKYQDGVGNEVRRRLLELEPRGS 436
Q+G GN+ E++ G+
Sbjct: 496 SGFSQNGRGNDAINLFEEMKLEGT 519
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 135/343 (39%), Gaps = 40/343 (11%)
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR--KRDACKVFDDM--CERSVVSWNVII 202
+G + A KSG S +N+L+ FY S R A VF D+ R V SWN ++
Sbjct: 30 DGEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLL 89
Query: 203 TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH-LQLIERGT 261
+ L + + P + +A + S G VH L
Sbjct: 90 NPLSHHRPLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLPSA 149
Query: 262 VLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSN 321
N + TAL++MY K G + A+L+F M N +W+AM+ G A ++EA ELF
Sbjct: 150 SSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQ 209
Query: 322 M-------KNSSISPNYVTFLGVLCACN-----HAGMVEDGYRYFHEMEHVHGIKPMRIH 369
M KN ++ ++ + V H +V+DG F +E
Sbjct: 210 MLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVE----------- 258
Query: 370 YHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLL 429
+++ + A+AG + A+ + + N I A+++ S Q+G R
Sbjct: 259 -NSLVTMYAKAGCMDAAF-HVFESSKERNSITWSAMITGYS------QNGNAESAVRMFS 310
Query: 430 ELE----PRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLK 468
++ P LV V N ++VG + M +G +
Sbjct: 311 QMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFE 353
>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 755
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 147/465 (31%), Positives = 241/465 (51%), Gaps = 10/465 (2%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H QI +G DA + L+ ++ + + +D + W +I G
Sbjct: 282 LHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFR---MFERSSDKDVVLWTAMISGLVQ 338
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+ +A+ VF M + G+KP+ T V+ ACA++ N G + + + L DV T
Sbjct: 339 NGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSILGYILRQELPLDVAT 398
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
N+LV Y C + VFD M R +VSWN ++T +N ++ EA+ F +M+
Sbjct: 399 QNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQ 458
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
PD T++ +L C G L LGKW+H +I G + T+L+DMY KCG + A+
Sbjct: 459 TPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQR 518
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
F++M ++ +WSA+I+G HG E AL +S S + PN+V FL VL +C+H G+
Sbjct: 519 CFNQMPSHDLVSWSAIIVGYGYHGKGEAALRFYSKFLESGMKPNHVIFLSVLSSCSHNGL 578
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPI--VLRA 404
VE G + M GI P H+ + D+L+RAG ++EAY + F P+P+ VL
Sbjct: 579 VEQGLNIYESMTKDFGIAPDLEHHACVVDLLSRAGRVEEAYN-VYKKKF-PDPVLDVLGI 636
Query: 405 LLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKN 464
+L A A + +G+ + +L L P + N V +A+ YA + WE+V +M++
Sbjct: 637 ILDACR---ANGNNELGDTIANDILMLRPMDAGNFVQLAHCYASINKWEEVGEAWTYMRS 693
Query: 465 VGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
+GLKK+ G S++++ G+I F++ ++S + I L+ L M
Sbjct: 694 LGLKKIPGWSFIDIHGTITTFFTDHNSHPQFQEIVCTLKILRKEM 738
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 165/345 (47%), Gaps = 21/345 (6%)
Query: 1 MVRFPVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDA 60
M++ VP+ + FP C SFL L L+Q +I VSGL DA
Sbjct: 52 MLKTHVPSDAYTFPSLLKAC------------SFLNLFSLGLTLHQ---RILVSGLSLDA 96
Query: 61 QILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDM 120
I L+ F ++ AR + +Y+ + +PW +I Y+ + R EA +F +M
Sbjct: 97 YIASSLINFYAKFGFADV--ARKVF-DYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEM 153
Query: 121 KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRK 180
+R+GI+P+ T VL +S L + G SD+ +N+++ YG C
Sbjct: 154 RRQGIQPSSVT---VLSLLFGVSELAHVQCLHGCAILYGFMSDINLSNSMLNVYGKCGNI 210
Query: 181 RDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSAC 240
+ K+FD M R +VSWN +I+ + + E + M+ GFE T VLS
Sbjct: 211 EYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVA 270
Query: 241 TELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
G L LG+ +H Q++ G L+ + T+LI +Y K G + A +F R + +V W+
Sbjct: 271 ASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWT 330
Query: 301 AMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
AMI GL Q+G A++AL +F M + P+ T V+ AC G
Sbjct: 331 AMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLG 375
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 174/363 (47%), Gaps = 4/363 (1%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LS L H+ +H + G +D + ++ N+ Y+R + +Y++
Sbjct: 166 LSLLFGVSELAHVQCLHGCAILYGFMSDINLSNSMLN--VYGKCGNIEYSRKLF-DYMDH 222
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
+ WN+LI YA E + + M+ +G + T+ VL A L G +
Sbjct: 223 RDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCL 282
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
+ ++G D + +L+ Y + A ++F+ ++ VV W +I+ V+N
Sbjct: 283 HGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSA 342
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
+A+ F +M G +P TM V++AC +LG+ +LG + ++ + L+ +L
Sbjct: 343 DKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSILGYILRQELPLDVATQNSL 402
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
+ MYAKCG + + ++F M ++ +W+AM+ G AQ+GY EAL LF+ M++ + +P+
Sbjct: 403 VTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDS 462
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
+T + +L C G + G ++ H +G++P + ++ D+ + G L A
Sbjct: 463 ITIVSLLQGCASTGQLHLG-KWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFN 521
Query: 392 NMP 394
MP
Sbjct: 522 QMP 524
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 120/253 (47%), Gaps = 3/253 (1%)
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N I ++ + + + M + + +T+P +LKAC+ ++ + G+ + +
Sbjct: 30 NATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRILV 89
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
SGL D Y ++L+ FY A KVFD M ER+VV W II + EA
Sbjct: 90 SGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSL 149
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
F +M+ G +P T+L +L +EL ++ + +H I G + + L +++++Y K
Sbjct: 150 FDEMRRQGIQPSSVTVLSLLFGVSELAHV---QCLHGCAILYGFMSDINLSNSMLNVYGK 206
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CG + +R LF M+ ++ +W+++I AQ G E L L M+ TF V
Sbjct: 207 CGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSV 266
Query: 338 LCACNHAGMVEDG 350
L G ++ G
Sbjct: 267 LSVAASRGELKLG 279
>gi|356532565|ref|XP_003534842.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like [Glycine max]
Length = 569
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 138/332 (41%), Positives = 191/332 (57%), Gaps = 6/332 (1%)
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
A KVF M R VV+WN +I V NL +A+ F +M EPD T V++AC
Sbjct: 153 AKKVFGKMSVRDVVTWNSMIGGYVRNLRFFDALSIFRRMLSAKVEPDGFTFASVVTACAR 212
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
LG L KWVH ++E+ LN L ALIDMYAKCG + +R +F + +V W+AM
Sbjct: 213 LGALGNAKWVHGLMVEKRVELNYILSAALIDMYAKCGRIDVSRQVFEEVARDHVSVWNAM 272
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
I GLA HG A +A +FS M+ + P+ +TF+G+L AC+H G+VE+G +YF M++
Sbjct: 273 ISGLAIHGLAMDATLVFSRMEMEHVLPDSITFIGILTACSHCGLVEEGRKYFGMMQNRFM 332
Query: 363 IKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGN 422
I+P HY TM D+L RAG ++EAY I M +P+ ++ RALLSA IH K V
Sbjct: 333 IQPQLEHYGTMVDLLGRAGLMEEAYAVIKEMRMEPDIVIWRALLSACRIHRKKELGEVAI 392
Query: 423 EVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSI 482
RL S + V+++N Y + W+ VRR MK G++K +G SWVELG I
Sbjct: 393 ANISRL------ESGDFVLLSNMYCSLNNWDGAERVRRMMKTRGVRKSRGKSWVELGDGI 446
Query: 483 HRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
H+F + Y S E+ IY++LE L K+ F
Sbjct: 447 HQFNAAYQSHPEMKSIYRVLEGLIQRAKLEGF 478
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 123/277 (44%), Gaps = 11/277 (3%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN++I GY + R +A+ +F M ++P FT+ V+ ACA + L V
Sbjct: 166 VTWNSMIGGYVRNLRFFDALSIFRRMLSAKVEPDGFTFASVVTACARLGALGNAKWVHGL 225
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ + ++ + + L+ Y C R + +VF+++ V WN +I+ + +A
Sbjct: 226 MVEKRVELNYILSAALIDMYAKCGRIDVSRQVFEEVARDHVSVWNAMISGLAIHGLAMDA 285
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL---GTAL 271
F +M+ PD T + +L+AC+ G + G+ + +++ ++ QL GT +
Sbjct: 286 TLVFSRMEMEHVLPDSITFIGILTACSHCGLVEEGR-KYFGMMQNRFMIQPQLEHYGT-M 343
Query: 272 IDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
+D+ + G + A + M E ++ W A++ H E +N+ S +
Sbjct: 344 VDLLGRAGLMEEAYAVIKEMRMEPDIVIWRALLSACRIHRKKELGEVAIANISRLE-SGD 402
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
+V + C+ N+ DG M G++ R
Sbjct: 403 FVLLSNMYCSLNNW----DGAERVRRMMKTRGVRKSR 435
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 150/493 (30%), Positives = 249/493 (50%), Gaps = 41/493 (8%)
Query: 34 FLKLCCSKKHLY----QIHAQIQVSGLQNDAQI-------------LKELVRFCTLSSSK 76
FL C+K + QIH + G D + L++ + SS +
Sbjct: 80 FLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHR 139
Query: 77 NLTYARSILCNYVN-----------DSVPI----PWNNLIRGYAWSDRPREAVWVFIDMK 121
++ +++ Y + D +PI WN +I GYA + ++A+ +F +M
Sbjct: 140 DVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMM 199
Query: 122 RRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKR 181
+ +KP E T V+ ACA+ + G QV + + G S++ N L+ Y C
Sbjct: 200 KTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVE 259
Query: 182 DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
AC++ + + + V+SWN +I EA+ F +M G P++ TML +L AC
Sbjct: 260 TACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA 319
Query: 242 ELGNLSLGKWVHLQLIER--GTVLN--CQLGTALIDMYAKCGAVGCA-RLLFSRMEEINV 296
LG + +G+W+H+ + ++ G V+ L T+LIDMYAKCG + A ++ S ++
Sbjct: 320 HLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSL 379
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
TW+AMI G A HG A A ++FS M+ + I P+ +TF+G+L AC+H+GM++ G F
Sbjct: 380 STWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRS 439
Query: 357 MEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKY 416
M + I P HY M D+L +G KEA I MP +P+ ++ +LL A IH
Sbjct: 440 MRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHG--- 496
Query: 417 QDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGL-KKMKGMSW 475
+G ++L+++EP + V+++N YA G W +V +R + + G+ KK+ G S
Sbjct: 497 NLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSS 556
Query: 476 VELGGSIHRFYSG 488
+E+ +H F G
Sbjct: 557 IEIDSVVHEFIIG 569
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 162/327 (49%), Gaps = 42/327 (12%)
Query: 65 ELVRFCTLSSS-KNLTYARSILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFID 119
+L+ FC LS L YA S+ +++P P WN + RG+A S P A+ +++
Sbjct: 11 QLLEFCILSPHFDGLPYAISVF-----ETIPEPNQLIWNIMFRGHALSSDPVSALKLYVV 65
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M G+ P FT+PF+LK+CA+ EG Q+ +V K G D D+Y + +L+ Y R
Sbjct: 66 MISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGR 125
Query: 180 KRDACKVFDDMCER-------------------------------SVVSWNVIITVCVEN 208
DA KVFD R VVSWN +I+ E
Sbjct: 126 LEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAET 185
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+A+ F +M +PDE+TM V+SAC + G++ LG+ VH + + G N ++
Sbjct: 186 GNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIV 245
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
ALID+Y+KCG V A L + +V +W+ +I G +EAL LF M S +
Sbjct: 246 NALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 305
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFH 355
PN VT L +L AC H G ++ G R+ H
Sbjct: 306 PNDVTMLSILPACAHLGAIDIG-RWIH 331
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 147/399 (36%), Positives = 214/399 (53%), Gaps = 3/399 (0%)
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
ND I W+ +I GYA S +A+ +F M GI P+EFT VL AC++ + EG
Sbjct: 274 NDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGK 333
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
QV + K G +S +Y LV Y DA K F+ + + +V W +I V+N
Sbjct: 334 QVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNG 393
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+A+ + +M+ G P+E TM VL AC+ L G+ +H + I+ G L +G+
Sbjct: 394 ENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGS 453
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
AL MYAKCG + ++F RM E ++ +W+AMI GL+Q+GY +EALELF M+ P
Sbjct: 454 ALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKP 513
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
+ VTF+ VL AC+H G+V+ G+ YF M G+ P HY M D+L+RAG L EA F
Sbjct: 514 DDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEF 573
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
I + + R LL A + Y+ +G +L+EL + S V+++ Y +
Sbjct: 574 IESTTIDHGLCLWRILLGACRNYR-NYE--LGAYAGEKLMELGSQESSAYVLLSGIYTAL 630
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
G E V VR MK G+ K G SW+EL ++H F G
Sbjct: 631 GRPEDVERVRSMMKVRGVSKEPGCSWIELKSNVHVFVVG 669
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 171/353 (48%), Gaps = 12/353 (3%)
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
V D +P + W +I GYA EA VF M+R EF + VL A A
Sbjct: 168 VFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEF 227
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
++ G Q+ K+GL + N LV Y C D+ +VF+ +++ ++W+ +IT
Sbjct: 228 VDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITG 287
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
++ +A+ F +M G P E T++ VL+AC++ + GK VH L++ G
Sbjct: 288 YAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQ 347
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+ TAL+DMYAK G AR F+ +++ ++ W++MI G Q+G E+AL L+ M+
Sbjct: 348 LYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQM 407
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
I PN +T VL AC++ + G R H +G+ ++ + A+ G+L+
Sbjct: 408 EGILPNELTMASVLKACSNLAAFDQG-RQIHARTIKYGLGLEVTIGSALSTMYAKCGNLE 466
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
E MP + + I A++S S Q+G G E E+ + ++
Sbjct: 467 EGNIVFRRMP-ERDIISWNAMISGLS------QNGYGKEALELFEEMRQQDTK 512
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 187/395 (47%), Gaps = 19/395 (4%)
Query: 47 IHAQI-QVSGLQNDAQILKELVRF----CTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
+HAQI +++ + + L+ F C L +K L + R +++ I WN LI
Sbjct: 29 LHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAK-LVFDR------IHNKDVISWNCLI 81
Query: 102 RGYAWSDRPREAVWV---FIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
GY+ P + +V F M+ I P T+ + A + +S + G Q A K
Sbjct: 82 NGYS-QQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKM 140
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
DV+ ++L+ Y +A +VFD M ER+ V+W +I+ GEA F
Sbjct: 141 ACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVF 200
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
M+ + +E VLSA + GK +H ++ G ++ + AL+ MYAKC
Sbjct: 201 ELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKC 260
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
G++ + +F + N TWSAMI G AQ G + +AL+LFS M + I+P+ T +GVL
Sbjct: 261 GSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVL 320
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
AC+ A VE+G + H G + + D+ A++G ++A N QP+
Sbjct: 321 NACSDACAVEEG-KQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGF-NYLQQPD 378
Query: 399 PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP 433
+VL + A + + + +D + R ++ + P
Sbjct: 379 -LVLWTSMIAGYVQNGENEDALSLYCRMQMEGILP 412
>gi|225431511|ref|XP_002274999.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
gi|296088567|emb|CBI37558.3| unnamed protein product [Vitis vinifera]
Length = 492
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 154/462 (33%), Positives = 234/462 (50%), Gaps = 9/462 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q HAQI V G + + +L+ S L AR + V ++ WN LI YA
Sbjct: 27 QTHAQILVHGFIPNITLQTDLLL--VYSKCGVLQDARKVFDKMVERNMH-SWNILIASYA 83
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ +A+ VF + G +P FT P V KACA I G + + V + G + V
Sbjct: 84 HNCFFYDALGVFDSFLKMGFRPDHFTLPPVFKACAGIGDSYLGKMLHSWVIRIGFEEYVV 143
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
++++ FY C DA + F +M R V WN++I + + +A+ F M G
Sbjct: 144 VGSSVLDFYAKCGGLVDAWRCFVNMSWRDSVVWNLMIVGLGKACFFRDALECFRDMLSEG 203
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ--LGTALIDMYAKCGAVGC 283
+ D T+ +LS C G+L GK +H Q++ + + C+ +G +LIDMYAKCG +
Sbjct: 204 VKMDSRTVPSILSVCGGEGDLMKGKEIHGQVV-KNQIFGCEVAIGNSLIDMYAKCGCLHD 262
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
+ +F+ M E+N+ TW++MI HG EAL LF MK PN VT +L +C+H
Sbjct: 263 SEKVFTTMSELNLVTWTSMISCYGVHGKGHEALALFKKMKYCGFQPNCVTITAILASCSH 322
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
+G++E G + F+ + +G +P HY M D+L R G+L+EA+ I NM V
Sbjct: 323 SGLIEQGRKIFYSINLDYGFEPSAEHYACMVDLLGRFGYLEEAFELIKNMKSAATASVWG 382
Query: 404 ALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMK 463
ALL+ +H +G L ELEPR S N + + + Y +G+W+ VS R M+
Sbjct: 383 ALLAGCLMHK---NIEIGEIAAHCLFELEPRNSSNYIALCSMYDSLGIWDGVSRTRAKMR 439
Query: 464 NVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+GL K G SW+ + G +H+FY S E IY+ L +
Sbjct: 440 ELGLVKTPGCSWITVAGRVHKFYQEDLSHPETQMIYETLHGI 481
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 152/466 (32%), Positives = 239/466 (51%), Gaps = 20/466 (4%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+H + GL D + L+R + + + A + + V + WN+LI G+
Sbjct: 126 QVHGVVVKLGLLADHYVQNSLIR--CYGACGDFSCAGKVFDEMLVRDV-VSWNSLISGFM 182
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ EA+ VF R ++P+ T VL ACA L G + V + ++
Sbjct: 183 KAGHFDEAISVFF---RMDVEPSMTTLVSVLAACARNGDLCTGKGIHG-VIERRFKVNLV 238
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N ++ Y +A +FD++ R +VSW ++IT V++ +++ F M+ LG
Sbjct: 239 LGNAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLG 298
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
PD + VLSAC LG L G WVH + +RG + +GTA++DMYAKCG + A
Sbjct: 299 ISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMAL 358
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F M + N +TW+A++ GLA HG EAL LF M S + PN +TFL +L AC H G
Sbjct: 359 KIFYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCG 418
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+V++G +YF M ++ + P HY M D+ RAG L+EA MP +P+ ++ L
Sbjct: 419 LVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLL 478
Query: 406 LSASSIHDAKYQDGVGN-----EVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRR 460
L+A + VGN ++ +LEL+ S V+++N A W V+ +RR
Sbjct: 479 LNACTT--------VGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRR 530
Query: 461 FMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
MK+ G++K G S +E+ G H F G S ++ IY++L +N
Sbjct: 531 LMKDRGVRKAPGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLIN 576
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 203/386 (52%), Gaps = 17/386 (4%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
L +K C + + QIHAQ+ SGL D + +++ F N C+Y+
Sbjct: 9 LDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFA-----NFVEYGDYACDYLEQ 63
Query: 92 S----VPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
P+N+LI GY + P+ AV V+ M R G P FT+P +LKAC+ SG E
Sbjct: 64 GNTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSRE 123
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
G QV V K GL +D Y N+L+R YG+C A KVFD+M R VVSWN +I+ ++
Sbjct: 124 GRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMK 183
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQL 267
EA+ F +M EP TT++ VL+AC G+L GK +H +IER +N L
Sbjct: 184 AGHFDEAISVFFRMD---VEPSMTTLVSVLAACARNGDLCTGKGIH-GVIERRFKVNLVL 239
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
G A++DMY K G A+ +F + ++ +W+ MI GL Q + +++LELFS M+ I
Sbjct: 240 GNAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGI 299
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT-MADILARAGHLKEA 386
SP+ + VL AC G ++ G + HE + GIK IH T + D+ A+ G ++ A
Sbjct: 300 SPDAIILTSVLSACASLGTLDFG-TWVHEYINQRGIK-WDIHIGTAIVDMYAKCGCIEMA 357
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIH 412
+M Q N ALL ++H
Sbjct: 358 LKIFYSMS-QRNTFTWNALLCGLAMH 382
>gi|356553601|ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Glycine max]
Length = 534
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 165/509 (32%), Positives = 257/509 (50%), Gaps = 47/509 (9%)
Query: 31 CLSFLKLCCSK-KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
CL+ L+ C+ K L +IHA I +GL + ++ FC SSS ++ YA +
Sbjct: 27 CLTMLQTQCTNMKDLQKIHAHIIKTGLAHHTVAASRVLTFCA-SSSGDINYAYLLF---- 81
Query: 90 NDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL 145
++P P WN +IRG++ S P A+ +F+DM + P TYP V KA A++
Sbjct: 82 -TTIPSPNLYCWNTIIRGFSRSSTPHLAISLFVDMLCSSVLPQRLTYPSVFKAYAQLGAG 140
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGS------CRRKRD--------AC------- 184
+G Q+ V K GL+ D + N ++ Y + RR D AC
Sbjct: 141 YDGAQLHGRVVKLGLEKDQFIQNTIIYMYANSGLLSEARRVFDELVDLDVVACNSMIMGL 200
Query: 185 ----------KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTML 234
++FD+M R+ V+WN +I+ V N L EA+ F KM+ EP E TM+
Sbjct: 201 AKCGEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQGERVEPSEFTMV 260
Query: 235 VVLSACTELGNLSLGKWVHLQLIERGTV-LNCQLGTALIDMYAKCGAVGCARLLFSRMEE 293
+LSAC LG L G+WVH ++RG LN + TA+IDMY KCG + A +F
Sbjct: 261 SLLSACAHLGALKHGEWVH-DYVKRGHFELNVIVLTAIIDMYCKCGVIVKAIEVFEASPT 319
Query: 294 INVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRY 353
+ W+++I+GLA +GY +A+E FS ++ S + P++V+F+GVL AC + G V Y
Sbjct: 320 RGLSCWNSIIIGLALNGYERKAIEYFSKLEASDLKPDHVSFIGVLTACKYIGAVGKARDY 379
Query: 354 FHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHD 413
F M + + I+P HY M ++L +A L+EA I MP + + I+ +LLS+ H
Sbjct: 380 FSLMMNKYEIEPSIKHYTCMVEVLGQAALLEEAEQLIKGMPLKADFIIWGSLLSSCRKHG 439
Query: 414 AKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGM 473
+ +R+ EL P + ++++N A +E+ R M+ +K G
Sbjct: 440 ---NVEIAKRAAQRVCELNPSDASGYLLMSNVQAASNQFEEAMEQRILMRERLAEKEPGC 496
Query: 474 SWVELGGSIHRFYSGYDSQVELAGIYQIL 502
S +EL G +H F +G + IY +L
Sbjct: 497 SSIELYGEVHEFLAGGRLHPKAREIYYLL 525
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 149/472 (31%), Positives = 237/472 (50%), Gaps = 34/472 (7%)
Query: 73 SSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTY 132
+S+ +L +R + + WN +I G A + EA +F +M+R+G+ FT+
Sbjct: 153 ASAGSLRDSRRLFAEMAPHRNVVSWNTMIGGCAQAGETSEACALFREMRRQGVLADVFTF 212
Query: 133 PFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSC------RRKRDACKV 186
+L C++ L G V ++ SG D+ N LV YG C R D +
Sbjct: 213 VSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMYGKCGDLWMAHRCFDVMPI 272
Query: 187 -------------------------FDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
F+ M ER+++SWN +I+ V+ E +G + +M
Sbjct: 273 KNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPETLGLYNRM 332
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
K LG PDE T+ VLS + G+L+ G+ +H + + + + +LIDMYA+CG V
Sbjct: 333 KSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSFSDPGVTVLNSLIDMYARCGQV 392
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
+ LF+ M N +W+ +I LA HG A+EA+ F M + + SP+ +TF+G+L AC
Sbjct: 393 DTSISLFTEMPNKNTISWNVIIGALAMHGRAQEAVMFFRAMVSDAFSPDEITFVGLLSAC 452
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIV 401
+H G++EDG YF M H++ +KP HY M D+L R GHL +A I +MP +P+ +V
Sbjct: 453 SHGGLLEDGQYYFKAMRHIYNVKPEVEHYACMVDLLGRHGHLAKAVDLIKDMPMKPDVVV 512
Query: 402 LRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRF 461
AL+ A IH +G ++LLELE V+++N E WE + +R+
Sbjct: 513 WGALIGACRIHG---HVEIGKLAIKQLLELEGINGGLFVLISNLLYETRQWEDMKRLRKL 569
Query: 462 MKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLN 513
M++ G KK G+S +E+ SIH F + IY ++ L H+ L+
Sbjct: 570 MRDRGTKKDMGVSSIEINNSIHEFGVEDIRHESSSQIYAAVDQLAYHLVSLH 621
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 133/429 (31%), Positives = 200/429 (46%), Gaps = 48/429 (11%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELV-RFCTLSSSKN---LTYARSILCN 87
L L+ C S +HL Q+HA + G A ++ +LV +C LS L +AR +
Sbjct: 7 LELLQQCRSIRHLDQLHAHLLAHGPSAVASVVPQLVASYCALSGRAGDVALCHARRMF-- 64
Query: 88 YVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS 143
D VP P +N+LIR Y+ S P+EA+ + D+ RRGI P EFT PFVLKAC+
Sbjct: 65 ---DRVPDPDRFAYNSLIRAYSNSGCPQEALCLHRDVLRRGILPNEFTLPFVLKACSRAR 121
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC-ERSVVSWNVII 202
+ K G V+ N L+ S RD+ ++F +M R+VVSWN +I
Sbjct: 122 AAEHALATHGVAIKLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPHRNVVSWNTMI 181
Query: 203 TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV 262
C + EA F +M+ G D T + +L C++ GNL +G+ VH ++ G+
Sbjct: 182 GGCAQAGETSEACALFREMRRQGVLADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSR 241
Query: 263 LNCQLGTALIDMYAKC-------------------------------GAVGCARLLFSRM 291
++ LG AL+DMY KC G+V AR F +M
Sbjct: 242 VDLILGNALVDMYGKCGDLWMAHRCFDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQM 301
Query: 292 EEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGY 351
E N+ +W+AMI Q G E L L++ MK+ ++P+ VT GVL G + G
Sbjct: 302 PERNIISWNAMISCYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASG- 360
Query: 352 RYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSI 411
R H P +++ D+ AR G + + + MP N I ++ A ++
Sbjct: 361 RMIHCYIQDSFSDPGVTVLNSLIDMYARCGQVDTSISLFTEMP-NKNTISWNVIIGALAM 419
Query: 412 HDAKYQDGV 420
H + Q+ V
Sbjct: 420 H-GRAQEAV 427
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 124/295 (42%), Gaps = 34/295 (11%)
Query: 69 FCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPT 128
C L+ ++ AR ++ I WN +I Y R E + ++ MK G+ P
Sbjct: 282 LCALAKHGSVDAARDWFEQMPERNI-ISWNAMISCYVQGGRFPETLGLYNRMKSLGLTPD 340
Query: 129 EFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD 188
E T VL + L G + + S D V N+L+ Y C + + +F
Sbjct: 341 EVTLAGVLSVHGQNGDLASGRMIHCYIQDSFSDPGVTVLNSLIDMYARCGQVDTSISLFT 400
Query: 189 DMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSL 248
+M ++ +SWNVII + EAV +F M F PDE T + +LSAC+ G L
Sbjct: 401 EMPNKNTISWNVIIGALAMHGRAQEAVMFFRAMVSDAFSPDEITFVGLLSACSHGGLLED 460
Query: 249 GKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ 308
G++ Y K R +++ E+ ++ M+ L +
Sbjct: 461 GQY-----------------------YFK-----AMRHIYNVKPEVE--HYACMVDLLGR 490
Query: 309 HGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
HG+ +A++L +M + P+ V + ++ AC G VE G ++ + GI
Sbjct: 491 HGHLAKAVDLIKDMP---MKPDVVVWGALIGACRIHGHVEIGKLAIKQLLELEGI 542
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 154/420 (36%), Positives = 222/420 (52%), Gaps = 6/420 (1%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANV 155
WN LI GYA ++ VF +M + + ++P E T ++ AC E L G + +
Sbjct: 174 WNALITGYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYM 233
Query: 156 TKSG-LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K L V L+ Y C A K+FD++ E++ V WN +I + L E
Sbjct: 234 MKDMVLREGVKLEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEV 293
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ +M +PD T+ VLSAC ++G +LG WVH + E+ + + +GTALIDM
Sbjct: 294 IELLREMHLSNLKPDRFTVSGVLSACAQMGAFNLGNWVH-RFAEKKGIWDVFIGTALIDM 352
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG +G AR +F +M E NV TW+A++ G A HG AE A+ELFS M+ S P+ +TF
Sbjct: 353 YAKCGFIGAARKVFDQMNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITF 412
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
L VL AC H+G+VE+G +YF M + I P HY M D+L RAG L+EA I M
Sbjct: 413 LAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMV 472
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
+PN +V ALLSA SIH +G +++L + VI+AN YA + +
Sbjct: 473 VEPNVVVWGALLSACSIHG---NIEIGEWAAHHMIKLNAMDGGSYVILANLYASAQRFNR 529
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
V VR M G+ K G S +E+G +H F IY +L+ L+ +K+ +
Sbjct: 530 VKAVREMMVEKGICKSHGCSMIEIGDVVHEFVVADKMHPRSEEIYSVLDELSKKLKMAGY 589
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 192/392 (48%), Gaps = 11/392 (2%)
Query: 25 LSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSI 84
+ + L+ ++ C + + L QIHA+ +S L I+ +++ + S L YA +
Sbjct: 3 IQTPKSVLALIETCTNIQQLKQIHAKSIISSLSYTQFIITKIIN--SFLSHACLDYATQV 60
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKR-RGIKPTEFTYPFVLKACAEIS 143
N + +N +IR Y+ S P A+ ++ M+ + I ++TYPFV KACA
Sbjct: 61 F-NQTQEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQF 119
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
+ +G +V + + G + D + ++L+ FY C +A +VFD+ + VV WN +IT
Sbjct: 120 AVEKGKEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALIT 179
Query: 204 VCVENLWLGEAVGYFVKMKDLG-FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV 262
+ ++ G F +M ++ P+E TM+ ++ AC E NL LG+ +H ++ + V
Sbjct: 180 GYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMM-KDMV 238
Query: 263 L--NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS 320
L +L ALI++Y KCG + AR LF + E N W+++I G Q G E +EL
Sbjct: 239 LREGVKLEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLR 298
Query: 321 NMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARA 380
M S++ P+ T GVL AC G G + H GI + I + D+ A+
Sbjct: 299 EMHLSNLKPDRFTVSGVLSACAQMGAFNLG-NWVHRFAEKKGIWDVFIG-TALIDMYAKC 356
Query: 381 GHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
G + A M + N A+LS + H
Sbjct: 357 GFIGAARKVFDQMN-ERNVATWNAILSGYASH 387
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 133/399 (33%), Positives = 211/399 (52%), Gaps = 26/399 (6%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W ++I GY R A+ + M++ G+K +L ACA L+ G V
Sbjct: 318 VSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY 377
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ + ++S+++ N L+ Y C A VF M + ++SWN +I GE
Sbjct: 378 IKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI---------GE- 427
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+PD TM VL AC L L GK +H ++ G + + AL+D+
Sbjct: 428 -----------LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDL 476
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y KCG +G ARLLF + ++ +W+ MI G HGY EA+ F+ M+++ I P+ V+F
Sbjct: 477 YVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSF 536
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ +L AC+H+G++E G+R+F+ M++ I+P HY M D+L+R G+L +AY FI +P
Sbjct: 537 ISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLP 596
Query: 395 FQPNPIVLRALL-SASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
P+ + ALL + HD + + +V R+ ELEP S V++AN YAE WE
Sbjct: 597 IAPDATIWGALLCGCRNYHDIE----LAEKVAERVFELEPENSGYYVLLANIYAEAEKWE 652
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQ 492
+V +R + GL+K G SW+E+ G ++ F SG +S
Sbjct: 653 EVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSS 691
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 141/294 (47%), Gaps = 20/294 (6%)
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
L+ YA +E VF M+++ + + + F++ A+I E + + + + G
Sbjct: 140 LVSFYATCGDLKEGRRVFDTMEKKNV----YLWNFMVSEYAKIGDFKESICLFKIMVEKG 195
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
++ +R A ++FD +C+R V+SWN +I+ V N +G +
Sbjct: 196 IEG---------------KRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYK 240
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+M LG + D T++ VL C G LSLGK VH I+ L+DMY+KCG
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 300
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
+ A +F +M E NV +W++MI G + G ++ A++L M+ + + V +L
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILH 360
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
AC +G +++G + H+ + ++ + + D+ A+ G ++ A + M
Sbjct: 361 ACARSGSLDNG-KDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTM 413
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%)
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
E + T VL C L + + GK VH + ++ LG L+ YA CG + R
Sbjct: 96 ELETKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRR 155
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
+F ME+ NV+ W+ M+ A+ G +E++ LF M I
Sbjct: 156 VFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGI 196
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 146/417 (35%), Positives = 214/417 (51%), Gaps = 5/417 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I W+ +I GYA + AV +F M G PTEFT+ VL A +++ L G Q
Sbjct: 287 ITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGL 346
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ K G + +Y + LV Y C DA + FD + E +V W +++ V+N EA
Sbjct: 347 MVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEA 406
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ + +M G P ++T+ L AC + L GK +H Q+++ G L +G+AL M
Sbjct: 407 LTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTM 466
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG + +F R+ + +V W+++I G +Q+G AL+LF MK P+ +TF
Sbjct: 467 YSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITF 526
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ +LCAC+H G+V+ G+ YF M +G+ P HY M DIL+RAG LKEA FI ++
Sbjct: 527 INILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESIT 586
Query: 395 FQPNPIVLRALLSA-SSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
+ R +L A S+ D VG RL+EL R S ++++N YA W
Sbjct: 587 IDHGTCLWRIVLGACRSLRDFD----VGAYAGERLMELGTRDSSAYILLSNIYASQRKWN 642
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
V VR M+ G+ K G SWVEL +H F G E I L L HMK
Sbjct: 643 DVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQLRRLAKHMK 699
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 167/341 (48%), Gaps = 9/341 (2%)
Query: 97 WNNLIRGYAWSDRPREAVWVF-IDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANV 155
W+ ++ GYA EA +F + ++ + +EF VL A + GL G Q+ +
Sbjct: 187 WSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLI 246
Query: 156 TKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
K GL V N+LV Y A VF+ ER+ ++W+ +IT +N AV
Sbjct: 247 VKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAV 306
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY 275
F +M GF P E T + VL+A ++LG L++GK H +++ G + + +AL+DMY
Sbjct: 307 SMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMY 366
Query: 276 AKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFL 335
AKCG + A+ F ++ E+++ W+AM+ G Q+G EEAL L++ M I P+ T
Sbjct: 367 AKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIA 426
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPF 395
L AC +E G + H +G+ ++ + ++ G+L++ + +P
Sbjct: 427 SGLRACAGIAALEPG-KQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPD 485
Query: 396 QPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGS 436
R +++ +SI Q+G GN E++ G+
Sbjct: 486 -------RDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGT 519
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 76/180 (42%), Gaps = 5/180 (2%)
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRK--RDACKVFDDM--CERSVVSWNVIIT 203
G + A KSG S N+L+ FY S R A VFDD+ R V SWN ++
Sbjct: 31 GEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSLLN 90
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH-LQLIERGTV 262
+ L + + P + +A + G H L V
Sbjct: 91 PLSRHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPSAV 150
Query: 263 LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM 322
N + T+L++MY K G V AR +F M + N ++WS M+ G A +EEA +LF M
Sbjct: 151 SNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLM 210
>gi|41469322|gb|AAS07178.1| putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
gi|108709518|gb|ABF97313.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 654
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 158/482 (32%), Positives = 244/482 (50%), Gaps = 23/482 (4%)
Query: 46 QIHAQIQVSGL--QNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPWNN 99
Q+HAQ V G +D+ IL V +S + AR + D +P + WN
Sbjct: 92 QLHAQAVVRGFLGGDDSTILATAV-LSFYASCREPDLARKVF-----DGMPRRNAVTWNA 145
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRG--IKPTEFTYPFVLKACAEISG----LNEGMQVQA 153
LI+GYA + R EA+ +F DMKR G + P +T+P +L G L G + A
Sbjct: 146 LIKGYAQAGRREEAILLFRDMKREGSHVAPDRYTFPALLSGIGREGGSGRTLELGGALHA 205
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+V K+GL+ D + +LV Y + R DA FD + + W+ +I+ V
Sbjct: 206 HVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWSSMISAYVNCEEEEG 265
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
A+ F M +P + V S C +G L +GK VH ++ T + + AL+
Sbjct: 266 ALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLT 325
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MY+ CG + A+ +FS + +NV ++++MI L QHGY +EALE F MK + + P+ VT
Sbjct: 326 MYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEVT 385
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
L ++ + NHAG+V +G + F+ M + GIKPM HY + D+LAR+G + +A I M
Sbjct: 386 LLNLISSFNHAGLVHEGLQMFNSMVDIEGIKPMYQHYACVVDMLARSGEIGKAMKTINEM 445
Query: 394 PFQPNPIVLRALLSASSIHDAKYQD-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMW 452
PF+ + R +L A S K++D G + L E+EP + N +++ N YA +G W
Sbjct: 446 PFEAEAPLWRIVLGACS----KHRDIETGKRIAEMLFEMEPYEATNYILLGNIYARLGRW 501
Query: 453 EKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVL 512
+ VR M G+ K SW+E+G +RF S IY+ L+ L +KV
Sbjct: 502 TEAEKVRSLMGERGVYKDDAFSWIEMGQRTYRFGVDDRSHPISREIYRNLDRLISTIKVA 561
Query: 513 NF 514
+
Sbjct: 562 GY 563
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 147/474 (31%), Positives = 237/474 (50%), Gaps = 9/474 (1%)
Query: 35 LKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LK C L +IHAQ G + + L + L Y ++
Sbjct: 224 LKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATM--YNKCGKLEYGLTLFEKMSMR 281
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
V + W +I + AV FI M+ + P E+T+ V+ CA ++ + G Q+
Sbjct: 282 DV-VSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQL 340
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
A + GL + + N+++ Y C + + +F +M R +VSW+ II + +
Sbjct: 341 HALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHV 400
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
EA M+ G +P E + VLSAC + L GK +H ++ G + +AL
Sbjct: 401 SEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSAL 460
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
I+MY KCG++ A +F E ++ +W+AMI G A+HGY+ E ++LF + + P+
Sbjct: 461 INMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDS 520
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
VTF+GVL AC+HAG+V+ G+RYF+ M + I P + HY M D+L RAG L +A I
Sbjct: 521 VTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIE 580
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGM 451
MPF + +V LL A +H + G R+L+LEP + + +AN YA G
Sbjct: 581 AMPFHRDDVVWSTLLRACRVHGDVER---GRRTAERILQLEPNCAGTHITLANIYASKGK 637
Query: 452 WEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
W + +++R+ MK+ G+ K G SW+++ + F +G S + IY +L+ L
Sbjct: 638 WREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLL 691
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 184/413 (44%), Gaps = 41/413 (9%)
Query: 30 QCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
+C+ L S +L Q I + L + LKELV+ L +++ + + +
Sbjct: 23 ECIDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELVKTGHLGNARRM-------FDKM 75
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMK-RRGIKPTEFTYPFVLKACAEISGLNEG 148
+ I W LI GY ++ EA+ +F +M+ G++ F KAC S +N G
Sbjct: 76 SQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYG 135
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
+ K+GL + V+ + L+ Y + + +VF +M R+VVSW IIT V
Sbjct: 136 ELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRA 195
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+ EA+ YF +M E D T + L AC + G L+ G+ +H Q +++G ++ +
Sbjct: 196 GYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVA 255
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
L MY KCG + LF +M +V +W+ +I L Q G E A++ F M+ S +S
Sbjct: 256 NTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVS 315
Query: 329 PNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRI-------------------- 368
PN TF V+ C + +E G + + H+ + +
Sbjct: 316 PNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVI 375
Query: 369 -HYHTMADIL---------ARAGHLKEAYTFIMNMPFQ---PNPIVLRALLSA 408
H T DI+ ++ GH+ EA+ + M + P L ++LSA
Sbjct: 376 FHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSA 428
>gi|125544635|gb|EAY90774.1| hypothetical protein OsI_12377 [Oryza sativa Indica Group]
Length = 653
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 158/482 (32%), Positives = 244/482 (50%), Gaps = 23/482 (4%)
Query: 46 QIHAQIQVSGL--QNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPWNN 99
Q+HAQ V G +D+ IL V +S + AR + D +P + WN
Sbjct: 91 QLHAQAVVRGFLGGDDSTILATAV-LSFYASCREPDLARKVF-----DGMPRRNAVTWNA 144
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRG--IKPTEFTYPFVLKACAEISG----LNEGMQVQA 153
LI+GYA + R EA+ +F DMKR G + P +T+P +L G L G + A
Sbjct: 145 LIKGYAQAGRREEAILLFRDMKREGSHVAPDRYTFPALLSGIGREGGSGRTLELGGALHA 204
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+V K+GL+ D + +LV Y + R DA FD + + W+ +I+ V
Sbjct: 205 HVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWSSMISAYVNCEEEEG 264
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
A+ F M +P + V S C +G L +GK VH ++ T + + AL+
Sbjct: 265 ALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLT 324
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MY+ CG + A+ +FS + +NV ++++MI L QHGY +EALE F MK + + P+ VT
Sbjct: 325 MYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEVT 384
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
L ++ + NHAG+V +G + F+ M + GIKPM HY + D+LAR+G + +A I M
Sbjct: 385 LLNLISSFNHAGLVHEGLQMFNSMVDIEGIKPMYQHYACVVDMLARSGEIGKAMKTINEM 444
Query: 394 PFQPNPIVLRALLSASSIHDAKYQD-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMW 452
PF+ + R +L A S K++D G + L E+EP + N +++ N YA +G W
Sbjct: 445 PFEAEAPLWRIVLGACS----KHRDIETGKRIAEMLFEMEPYEATNYILLGNIYARLGRW 500
Query: 453 EKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVL 512
+ VR M G+ K SW+E+G +RF S IY+ L+ L +KV
Sbjct: 501 TEAEKVRSLMGERGVYKDDAFSWIEMGQRTYRFGVDDRSHPISREIYRNLDRLISTIKVA 560
Query: 513 NF 514
+
Sbjct: 561 GY 562
>gi|125586937|gb|EAZ27601.1| hypothetical protein OsJ_11548 [Oryza sativa Japonica Group]
Length = 651
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 158/482 (32%), Positives = 244/482 (50%), Gaps = 23/482 (4%)
Query: 46 QIHAQIQVSGL--QNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPWNN 99
Q+HAQ V G +D+ IL V +S + AR + D +P + WN
Sbjct: 92 QLHAQAVVRGFLGGDDSTILATAV-LSFYASCREPDLARKVF-----DGMPRRNAVTWNA 145
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRG--IKPTEFTYPFVLKACAEISG----LNEGMQVQA 153
LI+GYA + R EA+ +F DMKR G + P +T+P +L G L G + A
Sbjct: 146 LIKGYAQAGRREEAILLFRDMKREGSHVAPDRYTFPALLSGIGREGGSGRTLELGGALHA 205
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
+V K+GL+ D + +LV Y + R DA FD + + W+ +I+ V
Sbjct: 206 HVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWSSMISAYVNCEEEEG 265
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
A+ F M +P + V S C +G L +GK VH ++ T + + AL+
Sbjct: 266 ALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLT 325
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MY+ CG + A+ +FS + +NV ++++MI L QHGY +EALE F MK + + P+ VT
Sbjct: 326 MYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEVT 385
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
L ++ + NHAG+V +G + F+ M + GIKPM HY + D+LAR+G + +A I M
Sbjct: 386 LLNLISSFNHAGLVHEGLQMFNSMVDIEGIKPMYQHYACVVDMLARSGEIGKAMKTINEM 445
Query: 394 PFQPNPIVLRALLSASSIHDAKYQD-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMW 452
PF+ + R +L A S K++D G + L E+EP + N +++ N YA +G W
Sbjct: 446 PFEAEAPLWRIVLGACS----KHRDIETGKRIAEMLFEMEPYEATNYILLGNIYARLGRW 501
Query: 453 EKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVL 512
+ VR M G+ K SW+E+G +RF S IY+ L+ L +KV
Sbjct: 502 TEAEKVRSLMGERGVYKDDAFSWIEMGQRTYRFGVDDRSHPISREIYRNLDRLISTIKVA 561
Query: 513 NF 514
+
Sbjct: 562 GY 563
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 156/470 (33%), Positives = 233/470 (49%), Gaps = 47/470 (10%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HA + GL D IL +R +S L AR IL + + + WN +I GY
Sbjct: 158 QVHAHLVKHGLGGDGHILSSAIRM--YASFGRLVEARRILDDKGGEVDAVCWNAMIDGYL 215
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
A +F M R + +
Sbjct: 216 RFGEVEAARELFEGMPDRSM--------------------------------------IS 237
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
T N ++ + C A + FD+M ER +SW+ +I ++ EA+ F +M+
Sbjct: 238 TWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEK 297
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
P + + VLSAC LG L G+W+H L+ LGT+L+DMYAKCG + A
Sbjct: 298 IRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAW 357
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F +M V +W+AMI GLA HG AE+A++LFS M I+PN +TF+GVL AC H G
Sbjct: 358 EVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGG 414
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+V+ G F+ M +G++P HY + D+L RAG L EA + ++P +P P V AL
Sbjct: 415 LVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGAL 474
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
L A H +G V + LLELEP+ S +++N YA+ G WE+V VR+ MK
Sbjct: 475 LGACRKHG---NVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKER 531
Query: 466 GLKKMKGMSWVELG-GSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
G+K G S ++LG G +H+F G S ++ IYQ+L+ + +++ +
Sbjct: 532 GIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGY 581
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 175/387 (45%), Gaps = 42/387 (10%)
Query: 10 NHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVR- 68
+H+ P S S L KA L + S HL Q HA I +G D+ I LV+
Sbjct: 16 HHLIPNGHSTETSKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKS 75
Query: 69 FCTLSSSKNLTYARSI-LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKP 127
+ +S+++ L++ S+ + ++V WN +I+ ++ P +A+ ++ +M +P
Sbjct: 76 YANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRP 135
Query: 128 TEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVF 187
++TYP VLKAC++ + EG+QV A++ K GL D + ++ +R Y S R +A ++
Sbjct: 136 NKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRIL 195
Query: 188 DDM-CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNL 246
DD E V WN +I GY G +
Sbjct: 196 DDKGGEVDAVCWNAMID------------GYL-----------------------RFGEV 220
Query: 247 SLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGL 306
+ + + +R + A+I +++CG V AR F M+E + +WSAMI G
Sbjct: 221 EAARELFEGMPDRSMI---STWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGY 277
Query: 307 AQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPM 366
Q G EALE+F M+ I P VL AC + G ++ G R+ H + I+
Sbjct: 278 IQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQG-RWIHTYAKRNSIQLD 336
Query: 367 RIHYHTMADILARAGHLKEAYTFIMNM 393
+ ++ D+ A+ G + A+ M
Sbjct: 337 GVLGTSLVDMYAKCGRIDLAWEVFEKM 363
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 154/462 (33%), Positives = 242/462 (52%), Gaps = 8/462 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILC-NYVNDSVPIPWNNLIRG 103
Q+H + +G + + + L+ +C S+ + AR + N+ + ++ + +N LI G
Sbjct: 77 QLHGHVIKTGCEPEPFVQTSLISMYCKCST---IASARKVFDENHHSRNLAVCYNALIAG 133
Query: 104 YAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD 163
Y+ + R +AV +F M++ G+ T ++ CA L G + A + GLD D
Sbjct: 134 YSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGD 193
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
+ N L+ Y C A K+FD M E+ +++WN +I+ +N G + + KM+
Sbjct: 194 LSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEF 253
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G PD T++ VLS+C LG + G+ V ++ G N L ALI+MYA+CG +
Sbjct: 254 TGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVK 313
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
AR +F M E NV +W+A+I G HG E A++LF M +S P+ F+ VL AC+H
Sbjct: 314 ARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSH 373
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
AG+ E G YF ME +G++P HY + D+L RAG L+EA I +M +P+ V
Sbjct: 374 AGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWG 433
Query: 404 ALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMK 463
ALL A IH + E +++E EP V+++N ++E G E + VR M+
Sbjct: 434 ALLGACKIHRNVELAELAFE---KVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMR 490
Query: 464 NVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
LKK G S+VE G IH F +G + + IY +L+ L
Sbjct: 491 ERKLKKEPGCSYVEYQGRIHLFLAGDRTHPQAQEIYHMLDGL 532
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 152/318 (47%), Gaps = 4/318 (1%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN +R A +EA+ ++ M G P FT+PF K+CA +S G Q+ +V
Sbjct: 24 WNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHVI 83
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDD--MCERSVVSWNVIITVCVENLWLGEA 214
K+G + + + +L+ Y C A KVFD+ V +N +I N +A
Sbjct: 84 KTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDA 143
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
V F +M+ G + TML ++ C +L G +H + G + +G L+ M
Sbjct: 144 VLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTM 203
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y +CG+V AR LF M E + TW+AMI G AQ+G A L+L+ M+ + I P+ VT
Sbjct: 204 YVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTL 263
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+GVL +C H G G +E + G + + ++ AR G+L +A M
Sbjct: 264 VGVLSSCAHLGAHAAGREVEQRIE-LSGFGFNPFLKNALINMYARCGNLVKARAIFDGMT 322
Query: 395 FQPNPIVLRALLSASSIH 412
+ N I A+++ +H
Sbjct: 323 -EKNVISWTAIIAGYGMH 339
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 4/162 (2%)
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
+ + SWN + EA+ + +M G P+ T +C L G
Sbjct: 18 QNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQ 77
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN--VWTWSAMILGLAQH 309
+H +I+ G + T+LI MY KC + AR +F ++A+I G + +
Sbjct: 78 LHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLN 137
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGY 351
+A+ LF M+ +S N VT LG++ C AG + G+
Sbjct: 138 SRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVC--AGPIHLGF 177
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 142/420 (33%), Positives = 229/420 (54%), Gaps = 11/420 (2%)
Query: 95 IPWNN------LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
IP+++ +I YA S++ +A +F+ + R + P E++ VL+AC + L+ G
Sbjct: 324 IPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFG 383
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
Q+ + K G +SD++ N L+ FY C + K+F + + + VSWN I+ ++
Sbjct: 384 KQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQS 443
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN-CQL 267
EA+ F +M+ + T VL AC ++ +H IE+ T N +
Sbjct: 444 GLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCS-IEKSTFNNDTVI 502
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
G +LID YAKCG + A +F + E ++ +W+A+I G A HG A +ALELF M S++
Sbjct: 503 GNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNV 562
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
N +TF+ +L C+ G+V G F M HGIKP HY + +L RAG L +A
Sbjct: 563 ESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDAL 622
Query: 388 TFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYA 447
FI ++P P+ +V RALLS+ IH +G ++LE+EP+ V+++N YA
Sbjct: 623 QFIGDIPSAPSAMVWRALLSSCIIHK---NVALGRFSAEKILEIEPQDETTYVLLSNMYA 679
Query: 448 EVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNL 507
G ++V+ +R+ M+N+G++K+ G+SWVE+ G IH F G ++ I +LE LNL
Sbjct: 680 AAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNL 739
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 157/338 (46%), Gaps = 12/338 (3%)
Query: 85 LCNYVNDSV----------PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPF 134
LC+ V+D+ + W ++ Y+ +D P A VF M+ G KP F
Sbjct: 209 LCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTS 268
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
VLKA + + G + K+ D++ + L+ Y C +DA F+ +
Sbjct: 269 VLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDD 328
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHL 254
V+ + +I+ ++ +A F+++ P+E ++ VL ACT + L GK +H
Sbjct: 329 VILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHN 388
Query: 255 QLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEE 314
I+ G + +G AL+D YAKC + + +FS + + N +W+ +++G +Q G EE
Sbjct: 389 HAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEE 448
Query: 315 ALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMA 374
AL +F M+ + + VT+ VL AC + + +E + +++
Sbjct: 449 ALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEK-STFNNDTVIGNSLI 507
Query: 375 DILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
D A+ G++++A ++ + + I A++S ++H
Sbjct: 508 DTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYALH 544
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 120/270 (44%), Gaps = 5/270 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ + L++ +A A +F ++ G + +F +LK + V +
Sbjct: 128 VSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSC 187
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K G D + + + L+ Y C DA VF+ + + V W +++ EN A
Sbjct: 188 AWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENA 247
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
F KM+ G +P+ + VL A L ++ LGK +H I+ +G AL+DM
Sbjct: 248 FRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDM 307
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG + ARL F + +V S MI AQ E+A ELF + SS+ PN +
Sbjct: 308 YAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSL 367
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIK 364
VL AC + ++ F + H H IK
Sbjct: 368 SSVLQACTNMVQLD-----FGKQIHNHAIK 392
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 86/161 (53%)
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
+ D+ + WN ++ G++ S EA+ VF +M+ + T+ TY VL+ACA + +
Sbjct: 425 LRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHA 484
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
Q+ ++ KS ++D N+L+ Y C RDA KVF + ER ++SWN II+ +
Sbjct: 485 GQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALH 544
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
+A+ F +M E ++ T + +LS C+ G ++ G
Sbjct: 545 GQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHG 585
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 129/308 (41%), Gaps = 25/308 (8%)
Query: 115 WVFIDMKRRGIKPT-----EFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS--DVYTN 167
W+ ++ I P+ F L+ C G V +V + G D++
Sbjct: 40 WLEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCA 99
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
N L+ YG A ++FD M ER++VS+ ++ + A F +++ G E
Sbjct: 100 NVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHE 159
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
++ + +L + L VH + G N +G+ LID Y+ C V A +
Sbjct: 160 VNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHV 219
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA--CNHAG 345
F+ + + W+AM+ +++ E A +FS M+ S PN VL A C +
Sbjct: 220 FNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSV 279
Query: 346 MVEDG-----YRYFHEME-HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
++ G + ++ E HV G + D+ A+ G +K+A +P+ +
Sbjct: 280 VLGKGIHGCAIKTLNDTEPHVGG---------ALLDMYAKCGDIKDARLAFEMIPYD-DV 329
Query: 400 IVLRALLS 407
I+L ++S
Sbjct: 330 ILLSFMIS 337
>gi|356534169|ref|XP_003535630.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Glycine max]
Length = 595
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 158/461 (34%), Positives = 238/461 (51%), Gaps = 10/461 (2%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q H+ +GL D + LV ++ N+ + V D V W LI GY
Sbjct: 130 QFHSVSVKTGLWCDIYVQNTLVHVYSICGD-NVGAGKVFEDMLVRDVVS--WTGLISGYV 186
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ EA+ +F+ R ++P T+ +L AC ++ LN G + V K ++
Sbjct: 187 KTGLFNEAISLFL---RMNVEPNVGTFVSILGACGKLGRLNLGKGIHGLVFKCLYGEELV 243
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N ++ Y C DA K+FD+M E+ ++SW +I V+ E++ F +M+ G
Sbjct: 244 VCNAVLDMYMKCDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFSQMQASG 303
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
FEPD + VLSAC LG L G+WVH + + +GT L+DMYAKCG + A+
Sbjct: 304 FEPDGVILTSVLSACASLGLLDCGRWVHEYIDCHRIKWDVHIGTTLVDMYAKCGCIDMAQ 363
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F+ M N+ TW+A I GLA +GY +EAL+ F ++ S PN VTFL V AC H G
Sbjct: 364 RIFNGMPSKNIRTWNAYIGGLAINGYGKEALKQFEDLVESGTRPNEVTFLAVFTACCHNG 423
Query: 346 MVEDGYRYFHEMEH-VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRA 404
+V++G +YF+EM ++ + P HY M D+L RAG + EA I MP P+ +L A
Sbjct: 424 LVDEGRKYFNEMTSPLYNLSPCLEHYGCMVDLLCRAGLVGEAVELIKTMPMPPDVQILGA 483
Query: 405 LLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKN 464
LLS+ + + G E+ + L +E + S V+++N YA W +V +VRR MK
Sbjct: 484 LLSSRNTYG---NVGFTQEMLKSLPNVEFQDSGIYVLLSNLYATNKKWAEVRSVRRLMKQ 540
Query: 465 VGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
G+ K G S + + G H F G +S + IY +L L
Sbjct: 541 KGISKAPGSSIIRVDGMSHEFLVGDNSHPQSEEIYVLLNIL 581
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/425 (32%), Positives = 205/425 (48%), Gaps = 31/425 (7%)
Query: 25 LSKARQCLSFLKL-----CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLT 79
++KA Q L ++ L C + QIHA + S L + ++ + F ++
Sbjct: 1 MNKAGQSLKWVLLDLIHKCNDLRSFKQIHAHLLTSALVTNDLVVTKAANFLG-KHITDVH 59
Query: 80 YARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKAC 139
Y + L + P N LI GYA P A+ ++ R G P +T+P VLK+C
Sbjct: 60 YPCNFLKQFDWSLSSFPCNLLISGYASGQLPWLAILIYRWTVRNGFVPDVYTFPAVLKSC 119
Query: 140 AEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWN 199
A+ SG+ E Q + K+GL D+Y N LV Y C A KVF+DM R VVSW
Sbjct: 120 AKFSGIGEVRQFHSVSVKTGLWCDIYVQNTLVHVYSICGDNVGAGKVFEDMLVRDVVSWT 179
Query: 200 VIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER 259
+I+ V+ EA+ F++M EP+ T + +L AC +LG L+LGK +H
Sbjct: 180 GLISGYVKTGLFNEAISLFLRMN---VEPNVGTFVSILGACGKLGRLNLGKGIH------ 230
Query: 260 GTVLNCQLG------TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
G V C G A++DMY KC +V AR +F M E ++ +W++MI GL Q
Sbjct: 231 GLVFKCLYGEELVVCNAVLDMYMKCDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPR 290
Query: 314 EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHY-HT 372
E+L+LFS M+ S P+ V VL AC G+++ G R+ HE H IK +H T
Sbjct: 291 ESLDLFSQMQASGFEPDGVILTSVLSACASLGLLDCG-RWVHEYIDCHRIK-WDVHIGTT 348
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELE 432
+ D+ A+ G + A MP N A + +I +G G E ++ +L
Sbjct: 349 LVDMYAKCGCIDMAQRIFNGMP-SKNIRTWNAYIGGLAI------NGYGKEALKQFEDLV 401
Query: 433 PRGSQ 437
G++
Sbjct: 402 ESGTR 406
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 141/447 (31%), Positives = 227/447 (50%), Gaps = 15/447 (3%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPWNNLI 101
Q+HA +G DA + +++ F + + R + + D +P + +N +I
Sbjct: 271 QLHALSVTTGFSRDASVGNQILDFYS-------KHDRVLETRMLFDEMPELDFVSYNVVI 323
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
Y+ +D+ ++ F +M+ G F + +L A +S L G Q+ + D
Sbjct: 324 SSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATAD 383
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
S ++ N+LV Y C +A +F + +R+ VSW +I+ V+ G + F KM
Sbjct: 384 SILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKM 443
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
+ D++T VL A +L LGK +H +I G + N G+ L+DMYAKCG++
Sbjct: 444 RGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSI 503
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
A +F M + N +W+A+I A +G E A+ F+ M S + P+ V+ LGVL AC
Sbjct: 504 KDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTAC 563
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIV 401
+H G VE G YF M ++GI P + HY M D+L R G EA + MPF+P+ I+
Sbjct: 564 SHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIM 623
Query: 402 LRALLSASSIHDAKYQDGVGNEVRRRLLELEP-RGSQNLVIVANKYAEVGMWEKVSNVRR 460
++L+A IH + + +L +E R + V ++N YA G WEKV +V++
Sbjct: 624 WSSVLNACRIHKNQ---SLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKK 680
Query: 461 FMKNVGLKKMKGMSWVELGGSIHRFYS 487
M+ G+KK+ SWVE+ IH F S
Sbjct: 681 AMRERGIKKVPAYSWVEVNHKIHVFSS 707
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 152/325 (46%), Gaps = 2/325 (0%)
Query: 84 ILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS 143
+L + + + +N LI GY E++ +F+ M++ G +P++FT+ VLKA +
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
G Q+ A +G D N ++ FY R + +FD+M E VS+NV+I+
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVIS 324
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
+ ++ +F +M+ +GF+ +LS L +L +G+ +H Q +
Sbjct: 325 SYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADS 384
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
+G +L+DMYAKC A L+F + + +W+A+I G Q G L+LF+ M+
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
S++ + TF VL A + G + H G + D+ A+ G +
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLG-KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSI 503
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSA 408
K+A MP N + AL+SA
Sbjct: 504 KDAVQVFEEMP-DRNAVSWNALISA 527
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 152/336 (45%), Gaps = 7/336 (2%)
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRG--IKPTEFTYPF 134
+++ AR + + + D + W L+ YA + EA +F M R P T+
Sbjct: 94 DVSSARDLF-DAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVY--TNNNLVRFYGSCRRKRDACKVFDDMCE 192
+L C + N QV A K G D++ + +N L++ Y RR AC +F+++ E
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
+ V++N +IT ++ E++ F+KM+ G +P + T VL A L + +LG+ +
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H + G + +G ++D Y+K V R+LF M E++ +++ +I +Q
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQY 332
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
E +L F M+ F +L + ++ G R H + + ++
Sbjct: 333 EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMG-RQLHCQALLATADSILHVGNS 391
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
+ D+ A+ +EA ++P Q + AL+S
Sbjct: 392 LVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALISG 426
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCA 284
GF+ D ++ G +S + V+ ++ + TV +I + K G V A
Sbjct: 43 GFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVST----NTMISGHVKTGDVSSA 98
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS--ISPNYVTFLGVLCACN 342
R LF M + V TW+ ++ A++ + +EA +LF M SS P++VTF +L CN
Sbjct: 99 RDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCN 158
Query: 343 HA 344
A
Sbjct: 159 DA 160
>gi|296084034|emb|CBI24422.3| unnamed protein product [Vitis vinifera]
Length = 502
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 150/454 (33%), Positives = 240/454 (52%), Gaps = 53/454 (11%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAE--ISGLNEGMQVQ 152
+ W + I + + + EA F M+ G++P T+ +L AC + + GL G +
Sbjct: 55 VSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFGGSIH 114
Query: 153 ANVTKSGLDSD-VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
A V K GLD++ V LV Y C + A +FD+M R+ VSWN +I C+ N +
Sbjct: 115 AYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNGEV 174
Query: 212 GEAV------------------GYFVK-------------MKDLGFEPDETTMLVVLSAC 240
GEA+ G FVK M+ G EPD T++ VL+AC
Sbjct: 175 GEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLAAC 234
Query: 241 TELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
LG L LG W++ ++++ N ++ +LIDMY++CG + AR +F +M + ++ +W+
Sbjct: 235 ANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRSLVSWN 294
Query: 301 AMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHV 360
+MI+G A +G+AEEALE F+ M+ H+G+V++G ++F M+
Sbjct: 295 SMIVGFALNGHAEEALEFFNLMRKE----------------GHSGLVDEGLQFFDIMKRT 338
Query: 361 HGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGV 420
I P HY + D+ +RAG L++A I NMP +PN +VL +LL+A H G+
Sbjct: 339 RKISPRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHG---DVGL 395
Query: 421 GNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGG 480
+ + L E++P N V+++N YA VG W+ S VR+ MK +G+ K G S +E+ G
Sbjct: 396 AERLMKYLCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGFSSIEMDG 455
Query: 481 SIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
SIH F +G + VE IY +L+ L L +++ +
Sbjct: 456 SIHEFVAGDKTHVETQNIYAMLDHLFLELRICGY 489
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 111/237 (46%), Gaps = 41/237 (17%)
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE--LGNLSLGKWV 252
+VSW I + N L EA F +M+ G P+ T L +LSACT+ L L G +
Sbjct: 54 IVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFGGSI 113
Query: 253 HLQLIERG-TVLNCQLGTALIDMYAKCGAV-----------------------GCAR--- 285
H + + G N +GTAL+DMY+KCG + GC R
Sbjct: 114 HAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNGE 173
Query: 286 -----LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
+LF +M E + +W++MI G + G E+ALE F M+ + + P+YVT + VL A
Sbjct: 174 VGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLAA 233
Query: 341 CNHAGMVEDGY---RYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
C + G + G R+ + + IK +++ D+ +R G ++ A MP
Sbjct: 234 CANLGALGLGLWINRFVMKQDFKDNIKI----SNSLIDMYSRCGCIRLARQVFEQMP 286
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%)
Query: 84 ILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS 143
+L + +++ I W ++I G+ +A+ F +M+ G++P T VL ACA +
Sbjct: 179 VLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLAACANLG 238
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
L G+ + V K ++ +N+L+ Y C R A +VF+ M +RS+VSWN +I
Sbjct: 239 ALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMIV 298
Query: 204 VCVENLWLGEAVGYFVKMKDLG 225
N EA+ +F M+ G
Sbjct: 299 GFALNGHAEEALEFFNLMRKEG 320
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 170/522 (32%), Positives = 256/522 (49%), Gaps = 52/522 (9%)
Query: 33 SFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDS 92
S + LC S + Q HA + + I + ++ L+S LTYA + D
Sbjct: 184 SLIDLCKSINQIKQTHANLITTAQITLPVIANKFLKNVALAS---LTYAHKLF-----DQ 235
Query: 93 VPIP----WNNLIRGYAWSDRPR-EAVWVFIDMKR-RGIKPTEFTYPFVLKACAEISGLN 146
+P P +N +I+ ++ S +++ VF + R G P +++ F AC +
Sbjct: 236 IPQPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAFGACGNGMCVR 295
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD------------------ 188
EG QV + K GLD +V+ N L+ +G R DA VFD
Sbjct: 296 EGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYSWNTMIGAYV 355
Query: 189 -------------DMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLV 235
+M ER VVSW+ II V+ EA+ +F KM +P+E TM+
Sbjct: 356 GSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVS 415
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME-EI 294
L+AC+ L L GKW+H+ + +N +L +LIDMYAKCG + A +F + +
Sbjct: 416 ALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVKR 475
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYF 354
VW W+AMI G A HG EEA+ +F MK +SPN VTF+ +L AC+H MV++G YF
Sbjct: 476 KVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHGYMVKEGKSYF 535
Query: 355 HEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDA 414
M +GI P HY M D+L+R+GHLK++ I++MP P+ + ALL+A I
Sbjct: 536 ELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGALLNACRI--- 592
Query: 415 KYQD-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMK-NVGLKKMKG 472
Y+D G + R + E++P V++ N Y+ G W + VR + N KK+ G
Sbjct: 593 -YKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSGRWNEARMVREKNEINSDRKKIPG 651
Query: 473 MSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
S +EL G H F G S + IY L+ + +K+ +
Sbjct: 652 FSSIELNGVFHEFLVGDRSHPQSREIYSFLDEMISKLKIAGY 693
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 153/457 (33%), Positives = 240/457 (52%), Gaps = 19/457 (4%)
Query: 63 LKELVRFCTLSSSKNLTYARSI---LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFID 119
LV+ C+L S L + ++ + Y DS L+ Y + + EA VF +
Sbjct: 13 FSSLVKACSLVS--ELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGKIVEARRVFDE 70
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M R + F + ++ A ++ Q+ + + + N ++ Y R
Sbjct: 71 MSERDV----FAWTTMISVHARTGDMSSARQLFDEMPVR----NTASWNAMIDGYSRLRN 122
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
A +F M R ++SW +I +N EA+ F +M+ G +PDE TM ++SA
Sbjct: 123 VESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATIISA 182
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C LG L LGK +HL +E G L+ +G+ALIDMYAKCG++ + ++F ++ + N++ W
Sbjct: 183 CAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLFCW 242
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+++I GLA HGYAEEAL +FS M+ I PN VTF+ VL AC HAG+VE+G + F M
Sbjct: 243 NSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSMSR 302
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH-DAKYQD 418
I P HY M D+L +AG L++A + +M +PN ++ ALL +H + K
Sbjct: 303 DFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLHRNLKIAQ 362
Query: 419 GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMK-GMSWVE 477
NE + LEP S ++ N YAEV W +V+N+R MK +G++K G SW+E
Sbjct: 363 VAVNESKV----LEPNNSGYYTLLVNMYAEVNRWSEVANIRATMKELGVEKTSPGSSWIE 418
Query: 478 LGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ IH+F + S + IY +L L+ +K+ +
Sbjct: 419 MDRKIHQFAASDKSHLASDEIYTLLVELDGQLKLSGY 455
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 39/231 (16%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M + + PT FT+ ++KAC+ +S L G V ++ K G DS V+ LV FYG+ +
Sbjct: 1 MVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGK 60
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
+A +VFD+M ER V +W +I+V
Sbjct: 61 IVEARRVFDEMSERDVFAWTTMISVHART------------------------------- 89
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
G++S + QL + V N A+ID Y++ V A LLFS+M ++ +W
Sbjct: 90 ----GDMSSAR----QLFDEMPVRNTASWNAMIDGYSRLRNVESAELLFSQMPNRDIISW 141
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
+ MI +Q+ EAL +F+ M+ + I P+ VT ++ AC H G ++ G
Sbjct: 142 TTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATIISACAHLGALDLG 192
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 142/491 (28%), Positives = 253/491 (51%), Gaps = 9/491 (1%)
Query: 27 KARQCLSFLKLCCSKKHLYQI---HAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARS 83
+A + L+LC + + H + LQ D + L+ S + AR
Sbjct: 62 QASDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLIN--AYSKCGFVELARQ 119
Query: 84 ILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS 143
+ + S+ + WN +I Y + EA+ +F +M+ G K +EFT VL AC
Sbjct: 120 VFDGMLERSL-VSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANC 178
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
E ++ K+ LD ++Y L+ Y C DA +VF+ M ++S V+W+ ++
Sbjct: 179 DALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVA 238
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
V++ EA+ + + + + E ++ T+ V+ AC+ L L GK +H + + G
Sbjct: 239 GYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGS 298
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
N + ++ +DMYAKCG++ + ++FS ++E N+ W+ +I G A+H +E + LF M+
Sbjct: 299 NVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQ 358
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+ PN VTF +L C H G+VE+G R+F M +G+ P +HY M DIL RAG L
Sbjct: 359 QDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLL 418
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
EAY I ++PF+P + +LL++ + + ++L ELEP + N V+++
Sbjct: 419 SEAYELIKSIPFEPTASIWGSLLASCRVCK---NLELAEVAAKKLFELEPENAGNHVLLS 475
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N YA WE+++ R+ +++ +KK++G SW+++ +H F G S + I +L+
Sbjct: 476 NIYAANKQWEEIAKSRKLLRDCDVKKVRGQSWIDIKDKVHIFRVGESSHPRIREICTMLD 535
Query: 504 TLNLHMKVLNF 514
L + ++ +
Sbjct: 536 NLVIELRKFGY 546
>gi|356509887|ref|XP_003523674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Glycine max]
Length = 750
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 209/368 (56%), Gaps = 6/368 (1%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN ++ GY + V +F +M+ GI + +CA++ +N G + NV
Sbjct: 374 WNFMVFGYGKVGENVKCVELFREMQWLGIHSETIGIASAIASCAQLGAVNLGRSIHCNVI 433
Query: 157 KSGLDS-DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
K LD ++ N+LV YG C + A ++F+ E VVSWN +I+ V EAV
Sbjct: 434 KGFLDGKNISVTNSLVEMYGKCGKMTFAWRIFNT-SETDVVSWNTLISSHVHIKQHEEAV 492
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY 275
F KM +P+ T++VVLSAC+ L +L G+ VH + E G LN LGTALIDMY
Sbjct: 493 NLFSKMVREDQKPNTATLVVVLSACSHLASLEKGERVHCYINESGFTLNLPLGTALIDMY 552
Query: 276 AKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFL 335
AKCG + +R++F M E +V W+AMI G +GYAE ALE+F +M+ S++ PN +TFL
Sbjct: 553 AKCGQLQKSRMVFDSMMEKDVICWNAMISGYGMNGYAESALEIFQHMEESNVMPNGITFL 612
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPF 395
+L AC HAG+VE+G F M+ + + P HY M D+L R G+++EA +++MP
Sbjct: 613 SLLSACAHAGLVEEGKYMFARMKS-YSVNPNLKHYTCMVDLLGRYGNVQEAEAMVLSMPI 671
Query: 396 QPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKV 455
P+ V ALL H+ Q +G + + ++LEP +I+AN Y+ +G WE+
Sbjct: 672 SPDGGVWGALLGHCKTHN---QIEMGIRIAKYAIDLEPENDGYYIIMANMYSFIGRWEEA 728
Query: 456 SNVRRFMK 463
NVRR MK
Sbjct: 729 ENVRRTMK 736
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 3/242 (1%)
Query: 78 LTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLK 137
+T+A I D V WN LI + + EAV +F M R KP T VL
Sbjct: 458 MTFAWRIFNTSETDVVS--WNTLISSHVHIKQHEEAVNLFSKMVREDQKPNTATLVVVLS 515
Query: 138 ACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS 197
AC+ ++ L +G +V + +SG ++ L+ Y C + + + VFD M E+ V+
Sbjct: 516 ACSHLASLEKGERVHCYINESGFTLNLPLGTALIDMYAKCGQLQKSRMVFDSMMEKDVIC 575
Query: 198 WNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLI 257
WN +I+ N + A+ F M++ P+ T L +LSAC G + GK++ ++
Sbjct: 576 WNAMISGYGMNGYAESALEIFQHMEESNVMPNGITFLSLLSACAHAGLVEEGKYMFARMK 635
Query: 258 ERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEAL 316
N + T ++D+ + G V A + M + W A++ H E +
Sbjct: 636 SYSVNPNLKHYTCMVDLLGRYGNVQEAEAMVLSMPISPDGGVWGALLGHCKTHNQIEMGI 695
Query: 317 EL 318
+
Sbjct: 696 RI 697
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 142/309 (45%), Gaps = 23/309 (7%)
Query: 44 LYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRG 103
L + HA SG + + +L+ S N + S L + + +N+ ++
Sbjct: 23 LLRFHALTVTSGHSTNLFMASKLISL--YDSLNNDPSSCSTLFHSLPSKDTFLYNSFLKS 80
Query: 104 -YAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
++ S PR + +F M+ + P FT P V+ A A ++ L G + A +K+GL
Sbjct: 81 LFSRSLFPR-VLSLFSHMRASNLSPNHFTLPIVVSAAAHLTLLPHGASLHALASKTGL-- 137
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE------AVG 216
+++ + V Y C R A KVFD++ +R VV+W +I V N GE +
Sbjct: 138 -FHSSASFVSLYSRCGRMELARKVFDEIPKRDVVAWTALIIGHVHN---GEPEKGLRCLR 193
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
+ + + +P+ T AC LG +S G +H +++ G Q ++++DMY+
Sbjct: 194 HVHGVVEDDEKPNAKTWEGGFLACGNLGAVSEGSCLHGVVVKNGVASFIQ--SSVLDMYS 251
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KCG A F + ++ W+++I A+ G E L LF M+ + I P+ G
Sbjct: 252 KCGVPREAYRSFCEVIHKDLLCWTSVIGVYARIGMMGECLRLFREMQENEIRPD-----G 306
Query: 337 VLCACNHAG 345
V+ C +G
Sbjct: 307 VVVGCVLSG 315
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 178/435 (40%), Gaps = 30/435 (6%)
Query: 43 HLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPWN 98
H +HA +GL + + L C R L V D +P + W
Sbjct: 124 HGASLHALASKTGLFHSSASFVSLYSRC----------GRMELARKVFDEIPKRDVVAWT 173
Query: 99 NLIRGYAWSDRPREAVWVFIDMK---RRGIKPTEFTYPFVLKACAEISGLNEGMQVQANV 155
LI G+ + P + + + KP T+ AC + ++EG + V
Sbjct: 174 ALIIGHVHNGEPEKGLRCLRHVHGVVEDDEKPNAKTWEGGFLACGNLGAVSEGSCLHGVV 233
Query: 156 TKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
K+G+ S + ++++ Y C R+A + F ++ + ++ W +I V +GE +
Sbjct: 234 VKNGVAS--FIQSSVLDMYSKCGVPREAYRSFCEVIHKDLLCWTSVIGVYARIGMMGECL 291
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY 275
F +M++ PD + VLS ++ GK H +I R V + ++ +L+ MY
Sbjct: 292 RLFREMQENEIRPDGVVVGCVLSGFGNSMDVFQGKAFHGVIIRRYYVDDEKVNDSLLFMY 351
Query: 276 AKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFL 335
K G + A +F + W+ M+ G + G + +ELF M+ I +
Sbjct: 352 CKFGMLSLAERIFPLCQGSGD-GWNFMVFGYGKVGENVKCVELFREMQWLGIHSETIGIA 410
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGI---KPMRIHYHTMADILARAGHLKEAYTFIMN 392
+ +C G V G R H + G K + + +++ ++ + G + A+ I N
Sbjct: 411 SAIASCAQLGAVNLG-RSIH-CNVIKGFLDGKNISV-TNSLVEMYGKCGKMTFAWR-IFN 466
Query: 393 MPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMW 452
+V L +S +H ++++ V N + + E + + LV+V + + +
Sbjct: 467 T--SETDVVSWNTLISSHVHIKQHEEAV-NLFSKMVREDQKPNTATLVVVLSACSHLASL 523
Query: 453 EKVSNVRRFMKNVGL 467
EK V ++ G
Sbjct: 524 EKGERVHCYINESGF 538
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 147/420 (35%), Positives = 224/420 (53%), Gaps = 14/420 (3%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPT-EFTYPFVLKACAEISGLNEGMQVQANV 155
WN I GY ++PREA+ +F M+R + +FT L A A I L G ++ +
Sbjct: 187 WNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYL 246
Query: 156 TKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
++ L+ D + L+ YG C +A +FD M +R VVSW +I C E+ E
Sbjct: 247 IRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGF 306
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY 275
F + G P+E T VL+AC + LGK VH ++ G +AL+ MY
Sbjct: 307 LLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMY 366
Query: 276 AKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFL 335
+KCG AR +F+ M + ++ +W+++I+G AQ+G +EAL F + S P+ VT++
Sbjct: 367 SKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYV 426
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPF 395
GVL AC HAG+V+ G YFH ++ HG+ HY + D+LAR+G KEA I NMP
Sbjct: 427 GVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPV 486
Query: 396 QPNPIVLRALLSASSIHDAKYQDGVGN-EVRRR----LLELEPRGSQNLVIVANKYAEVG 450
+P+ + +LL IH GN E+ +R L E+EP + +AN YA G
Sbjct: 487 KPDKFLWASLLGGCRIH--------GNLELAKRAAKALYEIEPENPATYITLANIYANAG 538
Query: 451 MWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
+W +V+NVR+ M N+G+ K G SW+E+ +H F G S + + I++ L L+ +K
Sbjct: 539 LWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIK 598
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 140/330 (42%), Gaps = 37/330 (11%)
Query: 109 RPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNN 168
R +EAV + + R +P+ Y ++ AC L G +V A+ S V+ +N
Sbjct: 70 RVKEAVEL---LHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISN 126
Query: 169 NLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL---- 224
L+ Y C DA +FD+M R + SWN +I + L +A F +M
Sbjct: 127 RLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFS 186
Query: 225 ------GF----EPDETTMLVVLSACTELGN------------------LSLGKWVHLQL 256
G+ +P E L + E + L LGK +H L
Sbjct: 187 WNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYL 246
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
I L+ + +AL+D+Y KCG++ AR +F +M++ +V +W+ MI + G EE
Sbjct: 247 IRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGF 306
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
LF ++ S + PN TF GVL AC G M H G P + +
Sbjct: 307 LLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHA-GYDPGSFAISALVHM 365
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALL 406
++ G+ + A + N QP+ + +L+
Sbjct: 366 YSKCGNTRVARR-VFNEMHQPDLVSWTSLI 394
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 116/241 (48%), Gaps = 3/241 (1%)
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
+L AR I + + D + W +I R E +F D+ + G++P E+T+ VL
Sbjct: 270 SLDEARGIF-DQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVL 328
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
ACA+ + + G +V + +G D + + LV Y C R A +VF++M + +V
Sbjct: 329 NACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLV 388
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG-KWVHLQ 255
SW +I +N EA+ +F + G +PD+ T + VLSACT G + G ++ H
Sbjct: 389 SWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSI 448
Query: 256 LIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEE 314
+ G + +ID+ A+ G A + M + + + W++++ G HG E
Sbjct: 449 KEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLEL 508
Query: 315 A 315
A
Sbjct: 509 A 509
>gi|357467379|ref|XP_003603974.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493022|gb|AES74225.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 566
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 157/455 (34%), Positives = 239/455 (52%), Gaps = 18/455 (3%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HAQ S Q + +L F S S +L YAR +L N +N +IR Y+
Sbjct: 6 QLHAQFIKSQNQRN---FSKLFTFAAQSPSGDLNYAR-LLLNTNPSLNSYYYNTIIRAYS 61
Query: 106 WSDRPR---EAVWVFIDMKRRGI---KPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
+ P +A+ +FI M + KP FTY F LK+C + + Q+ + K G
Sbjct: 62 HTSNPTHHFQALSLFIFMLQPHTNVPKPDTFTYSFALKSCGRLKLTQQAKQLHGFINKMG 121
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
D+Y N L+ Y A +VFD M R VVSW +I V + EA+ F
Sbjct: 122 FGFDLYIQNALIHMYSEIGELVIARQVFDRMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQ 181
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+M ++G + +E T++ VL C + G LS+G+ VH + E+G + TALI MY+KCG
Sbjct: 182 RMLEVGVDVNEATVISVLRGCADSGALSVGRKVHGIVKEKGIDFKANVCTALIHMYSKCG 241
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
+ AR +F + + +V+ W+AMI GLA HG +EA+ELF M+ ++ P+ T + VL
Sbjct: 242 CLESAREVFDDVLDRDVFVWTAMIYGLACHGMCKEAIELFLEMETCNVKPDERTIMVVLS 301
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
A +AG+V +GY +F++++ + +KP H+ M D+LA+ G L+EA FI MP +P+
Sbjct: 302 AYRNAGLVREGYMFFNDVQKRYSMKPNIKHFGCMVDLLAKGGCLEEAEDFINAMPMKPDA 361
Query: 400 IVLRALLSASSIHDAKYQDGVGNEVRRRLLELE---PRGSQNLVIVANKYAEVGMWEKVS 456
++ R L+ A +H D E + LEL+ S + ++ +N YA G W +
Sbjct: 362 VIWRTLIWACKVH----ADTERAERLMKHLELQGMSAHDSGSYILASNVYASTGKWCDKA 417
Query: 457 NVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG-YD 490
VR M GL K G S +E+ G +H F G YD
Sbjct: 418 EVRELMNKKGLVKPPGSSRIEVDGVVHEFVMGDYD 452
>gi|222622248|gb|EEE56380.1| hypothetical protein OsJ_05522 [Oryza sativa Japonica Group]
Length = 518
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 138/452 (30%), Positives = 240/452 (53%), Gaps = 8/452 (1%)
Query: 39 CSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWN 98
C+K ++ + +Q +G + + L+ C ++++ AR++ SV WN
Sbjct: 39 CAKA--VEVLSLMQEAGFEPNEVTYSNLLASCI--KARDVHSARAMFDKISRPSVTT-WN 93
Query: 99 NLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
L+ GY ++ ++ + +F M+ + ++P T +L +C+++ L+ G QV + +
Sbjct: 94 TLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRF 153
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
L +D++ + LV Y C + A +F+ M ER VV WN II+ + EA +F
Sbjct: 154 LLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFF 213
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
+M++ G P E++ ++++C+ L ++ G+ +H Q+++ G N +G+ALIDMYAKC
Sbjct: 214 KQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKC 273
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
G + ARL F M N+ W+ MI G AQ+G ++A+ELF M + P+ VTF+ VL
Sbjct: 274 GNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVL 333
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
C+H+G+V+ +F+ ME+ +GI P+ HY + D L RAG E I MP + +
Sbjct: 334 TGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDD 393
Query: 399 PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
PI+ LL+A +H + +G L ++P+ V+++N YA +G S V
Sbjct: 394 PIIWEVLLAACVVH---HNAELGKCAAEHLFRIDPKNPSPYVLLSNIYASLGRHGDASAV 450
Query: 459 RRFMKNVGLKKMKGMSWVELGGSIHRFYSGYD 490
R M N G+ K +G SW++ + F D
Sbjct: 451 RALMSNRGVVKGRGYSWIDQKDGVRAFMVADD 482
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 103/239 (43%), Gaps = 37/239 (15%)
Query: 174 YGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTM 233
Y C +A KVF+ + ++VSWN++IT + +AV M++ GFEP+E T
Sbjct: 2 YTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTY 61
Query: 234 LVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEE 293
+L++C K V AR +F ++
Sbjct: 62 SNLLASCI-----------------------------------KARDVHSARAMFDKISR 86
Query: 294 INVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRY 353
+V TW+ ++ G Q ++ +ELF M++ ++ P+ T +L +C+ G+++ G R
Sbjct: 87 PSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFG-RQ 145
Query: 354 FHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
H + + D+ ++ G + A + I N + + + +++S +IH
Sbjct: 146 VHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARS-IFNKMTERDVVCWNSIISGLTIH 203
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 81/188 (43%), Gaps = 9/188 (4%)
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MY KC + A +F + + + +W+ +I G Q G +A+E+ S M+ + PN VT
Sbjct: 1 MYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVT 60
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
+ +L +C A V F ++ +P ++T+ + ++ M
Sbjct: 61 YSNLLASCIKARDVHSARAMFDKIS-----RPSVTTWNTLLSGYCQEEQHQDTIELFRRM 115
Query: 394 P---FQPNPIVLRALLSA-SSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
QP+ L +LS+ S + + V + R LL + + LV + +K ++
Sbjct: 116 QHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQI 175
Query: 450 GMWEKVSN 457
G+ + N
Sbjct: 176 GIARSIFN 183
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 153/468 (32%), Positives = 242/468 (51%), Gaps = 7/468 (1%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
IH QI G +D + LV + ++ A+ + + ++ + W ++I GYA
Sbjct: 176 IHGQIIKYGFGSDVFVQNGLVAL--YAKCGHIGVAKVVFDGLYHRTI-VSWTSIISGYAQ 232
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+ + EA+ +F M+ G+KP +L+A ++ L +G + V K GL+ +
Sbjct: 233 NGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPAL 292
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
+L FY C A FD M +V+ WN +I+ +N EAV F M
Sbjct: 293 LISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNI 352
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
+PD T+ + A ++G+L L +W+ + + + + T+LIDMYAKCG+V AR
Sbjct: 353 KPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARR 412
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
+F R + +V WSAMI+G HG EA+ L+ MK + + PN VTF+G+L ACNH+G+
Sbjct: 413 VFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGL 472
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALL 406
V++G+ FH M+ I P HY + D+L RAG+L EA FIM +P +P V ALL
Sbjct: 473 VKEGWELFHCMKDFE-IVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALL 531
Query: 407 SASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVG 466
SA I+ +G +L L+P + + V ++N YA +W+ V++VR M+ G
Sbjct: 532 SACKIYRCV---TLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKG 588
Query: 467 LKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
L K G S +E+ G + F+ G S I+ L+ L +K + F
Sbjct: 589 LNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERRLKEVGF 636
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 169/308 (54%), Gaps = 3/308 (0%)
Query: 41 KKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNL 100
K+HL QIH ++ +SGLQ++ ++ +LV S+ + YAR + + V + WN +
Sbjct: 69 KRHLDQIHNRLVISGLQHNGFLMTKLVN--GSSNLGQICYARKLFDEFCYPDVFM-WNAI 125
Query: 101 IRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGL 160
IR Y+ ++ R+ V ++ M+ G+ P FT+P+VLKAC E+ + + K G
Sbjct: 126 IRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGF 185
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK 220
SDV+ N LV Y C A VFD + R++VSW II+ +N EA+ F +
Sbjct: 186 GSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQ 245
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
M++ G +PD ++ +L A T++ +L G+ +H +I+ G L +L YAKCG
Sbjct: 246 MRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGL 305
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
V A+ F +M+ NV W+AMI G A++G+AEEA+ LF M + +I P+ VT + A
Sbjct: 306 VTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLA 365
Query: 341 CNHAGMVE 348
G +E
Sbjct: 366 SAQVGSLE 373
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 125/259 (48%), Gaps = 2/259 (0%)
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ + SGL + + LV + + A K+FD+ C V WN II N
Sbjct: 74 QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNN 133
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+ V + M+ G PD T VL ACTEL + L +H Q+I+ G + +
Sbjct: 134 MYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQN 193
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
L+ +YAKCG +G A+++F + + +W+++I G AQ+G A EAL +FS M+N+ + P
Sbjct: 194 GLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKP 253
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
+++ + +L A +E G R H G++ ++ A+ G + A +F
Sbjct: 254 DWIALVSILRAYTDVDDLEQG-RSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSF 312
Query: 390 IMNMPFQPNPIVLRALLSA 408
M N I+ A++S
Sbjct: 313 FDQMK-TTNVIMWNAMISG 330
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 156/470 (33%), Positives = 232/470 (49%), Gaps = 47/470 (10%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HA + GL D IL +R +S L AR IL + + + WN +I GY
Sbjct: 159 QVHAHLVKHGLGGDGHILSSAIRM--YASFGRLVEARRILDDKGGEVDAVCWNAMIDGYL 216
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
A +F M R + +
Sbjct: 217 RFGEVEAARELFEGMPDRSM--------------------------------------IS 238
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
T N ++ + C A + FD+M ER +SW+ +I ++ EA+ F +M+
Sbjct: 239 TWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEK 298
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
P + + VLSAC LG L G+W+H L+ LGT+L+DMYAKCG + A
Sbjct: 299 IRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAW 358
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F +M V +W+AMI GLA HG AE+A++LFS M I PN +TF+GVL AC H G
Sbjct: 359 EVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACAHGG 415
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+V+ G F+ M +G++P HY + D+L RAG L EA + ++P +P P V AL
Sbjct: 416 LVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGAL 475
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
L A H +G V + LLELEP+ S +++N YA+ G WE+V VR+ MK
Sbjct: 476 LGACRKHG---NVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKER 532
Query: 466 GLKKMKGMSWVELG-GSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
G+K G S ++LG G +H+F G S ++ IYQ+L+ + +++ +
Sbjct: 533 GIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGY 582
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 176/392 (44%), Gaps = 42/392 (10%)
Query: 5 PVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILK 64
P +H+ P S S L KA L + S HL Q HA I +G D+ I
Sbjct: 12 PYHHHHHLIPKGHSTETSKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAG 71
Query: 65 ELVR-FCTLSSSKNLTYARSI-LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKR 122
LV+ + +S+++ L++ S+ + ++V WN +I+ ++ P +A+ ++ +M
Sbjct: 72 SLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVV 131
Query: 123 RGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRD 182
+P ++TYP VLKAC++ + EG+QV A++ K GL D + ++ +R Y S R +
Sbjct: 132 AHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVE 191
Query: 183 ACKVFDDM-CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
A ++ DD E V WN +I GY
Sbjct: 192 ARRILDDKGGEVDAVCWNAMID------------GYL----------------------- 216
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
G + + + + +R + A+I +++CG V AR F M+E + +WSA
Sbjct: 217 RFGEVEAARELFEGMPDRSMI---STWNAMISGFSRCGMVEVAREFFDEMKERDEISWSA 273
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
MI G Q G EALE+F M+ I P VL AC + G ++ G R+ H +
Sbjct: 274 MIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQG-RWIHTYAKRN 332
Query: 362 GIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
I+ + ++ D+ A+ G + A+ M
Sbjct: 333 SIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKM 364
>gi|115444451|ref|NP_001046005.1| Os02g0167200 [Oryza sativa Japonica Group]
gi|113535536|dbj|BAF07919.1| Os02g0167200, partial [Oryza sativa Japonica Group]
Length = 526
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 138/452 (30%), Positives = 240/452 (53%), Gaps = 8/452 (1%)
Query: 39 CSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWN 98
C+K ++ + +Q +G + + L+ C ++++ AR++ SV WN
Sbjct: 55 CAKA--VEVLSLMQEAGFEPNEVTYSNLLASCI--KARDVHSARAMFDKISRPSVTT-WN 109
Query: 99 NLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
L+ GY ++ ++ + +F M+ + ++P T +L +C+++ L+ G QV + +
Sbjct: 110 TLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRF 169
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
L +D++ + LV Y C + A +F+ M ER VV WN II+ + EA +F
Sbjct: 170 LLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFF 229
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
+M++ G P E++ ++++C+ L ++ G+ +H Q+++ G N +G+ALIDMYAKC
Sbjct: 230 KQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKC 289
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
G + ARL F M N+ W+ MI G AQ+G ++A+ELF M + P+ VTF+ VL
Sbjct: 290 GNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVL 349
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
C+H+G+V+ +F+ ME+ +GI P+ HY + D L RAG E I MP + +
Sbjct: 350 TGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDD 409
Query: 399 PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
PI+ LL+A +H + +G L ++P+ V+++N YA +G S V
Sbjct: 410 PIIWEVLLAACVVH---HNAELGKCAAEHLFRIDPKNPSPYVLLSNIYASLGRHGDASAV 466
Query: 459 RRFMKNVGLKKMKGMSWVELGGSIHRFYSGYD 490
R M N G+ K +G SW++ + F D
Sbjct: 467 RALMSNRGVVKGRGYSWIDQKDGVRAFMVADD 498
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 36/299 (12%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN LI G+ +AV V M+ G +P E TY +L +C +
Sbjct: 40 VSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIK------------- 86
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
R A +FD + SV +WN +++ + +
Sbjct: 87 ----------------------ARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDT 124
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M+ +PD TT+ V+LS+C++LG L G+ VH + + + + L+DM
Sbjct: 125 IELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDM 184
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG +G AR +F++M E +V W+++I GL H +EA + F M+ + I P ++
Sbjct: 185 YSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSY 244
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
++ +C+ + G R H G + D+ A+ G++ +A F M
Sbjct: 245 ASMINSCSRLSSIPHG-RQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTM 302
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 112/256 (43%), Gaps = 37/256 (14%)
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
+ G SD + N+L+ Y C +A KVF+ + ++VSWN++IT + +AV
Sbjct: 1 RKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVE 60
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
M++ GFEP+E T +L++C
Sbjct: 61 VLSLMQEAGFEPNEVTYSNLLASCI----------------------------------- 85
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
K V AR +F ++ +V TW+ ++ G Q ++ +ELF M++ ++ P+ T
Sbjct: 86 KARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAV 145
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
+L +C+ G+++ G R H + + D+ ++ G + A + I N +
Sbjct: 146 ILSSCSKLGILDFG-RQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARS-IFNKMTE 203
Query: 397 PNPIVLRALLSASSIH 412
+ + +++S +IH
Sbjct: 204 RDVVCWNSIISGLTIH 219
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 87/196 (44%), Gaps = 9/196 (4%)
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
+G +LIDMY KC + A +F + + + +W+ +I G Q G +A+E+ S M+ +
Sbjct: 9 HVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEA 68
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
PN VT+ +L +C A V F ++ +P ++T+ + ++
Sbjct: 69 GFEPNEVTYSNLLASCIKARDVHSARAMFDKIS-----RPSVTTWNTLLSGYCQEEQHQD 123
Query: 386 AYTFIMNMP---FQPNPIVLRALLSA-SSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVI 441
M QP+ L +LS+ S + + V + R LL + + LV
Sbjct: 124 TIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVD 183
Query: 442 VANKYAEVGMWEKVSN 457
+ +K ++G+ + N
Sbjct: 184 MYSKCGQIGIARSIFN 199
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 139/417 (33%), Positives = 222/417 (53%), Gaps = 3/417 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W ++ Y + + F M+ + P E+T+ V+ CA + L G Q+ A+
Sbjct: 284 VSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAH 343
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V G + + N+++ Y C KVF M R +++W+ II + + EA
Sbjct: 344 VLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEA 403
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
Y +M+ G +P+E + VLS C + L GK +H ++ G + +ALI M
Sbjct: 404 FEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIM 463
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG++ A +F + ++ +W+AMI G A+HG+++EA+ELF N++ + P+ VTF
Sbjct: 464 YAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTF 523
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+GVL AC+HAGMV+ G+ YF+ M + I P + HY M D+L RAG L +A T I +MP
Sbjct: 524 IGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMP 583
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
Q + +V LL A IH G +L+L+P + + +AN +A G W++
Sbjct: 584 IQWDDVVWSTLLRACRIHG---DVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKE 640
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
+N+R MK+ G+ K G S V++ S+ F SG S + IY ILE L M++
Sbjct: 641 AANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELASGMEI 697
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 172/404 (42%), Gaps = 23/404 (5%)
Query: 42 KHLYQIHAQIQVSG-LQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IP 96
+HLY + ++ N + + + L + +L AR + D +P +
Sbjct: 28 RHLYTKPLSLTLNAHFSNKVDLAEANNQLKILVKTNHLKDARDLF-----DQLPQRDEVS 82
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEISGLNE--GMQVQA 153
W N+I GY S EA+ +F M+ + ++ F LK C GLN G +
Sbjct: 83 WTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCG--LGLNYLYGTNLHG 140
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
K GL + V+ + L+ Y +CKVFD+M R+ V+W +IT V +
Sbjct: 141 FSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEA 200
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALID 273
+ YF M E D + L A + G L+ G+ +H Q +++G N + +L
Sbjct: 201 GLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTT 260
Query: 274 MYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVT 333
MY KCG + F +M ++V +W+ ++ Q G + L+ F M+ S++ PN T
Sbjct: 261 MYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYT 320
Query: 334 FLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
F V+ C + ++ G + + V + + + M + ++ G L +M
Sbjct: 321 FSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMT-LYSKCGELASVSKVFCSM 379
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
F R +++ S+I A Q G G E L + G +
Sbjct: 380 KF-------RDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPK 416
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 139/417 (33%), Positives = 222/417 (53%), Gaps = 3/417 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W ++ Y + + F M+ + P E+T+ V+ CA + L G Q+ A+
Sbjct: 284 VSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAH 343
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V G + + N+++ Y C KVF M R +++W+ II + + EA
Sbjct: 344 VLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEA 403
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
Y +M+ G +P+E + VLS C + L GK +H ++ G + +ALI M
Sbjct: 404 FEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIM 463
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG++ A +F + ++ +W+AMI G A+HG+++EA+ELF N++ + P+ VTF
Sbjct: 464 YAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTF 523
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+GVL AC+HAGMV+ G+ YF+ M + I P + HY M D+L RAG L +A T I +MP
Sbjct: 524 IGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMP 583
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
Q + +V LL A IH G +L+L+P + + +AN +A G W++
Sbjct: 584 IQWDDVVWSTLLRACRIHG---DVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKE 640
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
+N+R MK+ G+ K G S V++ S+ F SG S + IY ILE L M++
Sbjct: 641 AANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELASGMEI 697
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 155/354 (43%), Gaps = 17/354 (4%)
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEISGL 145
D +P + W N+I GY S EA+ +F M+ + ++ F LK C GL
Sbjct: 73 DQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCG--LGL 130
Query: 146 NE--GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
N G + K+GL + V+ + L+ Y +CKVFD+M R+ V+W +IT
Sbjct: 131 NYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVIT 190
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
V + + YF M E D + L A + G L+ G+ +H Q +++G
Sbjct: 191 GLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDE 250
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
N + +L MY KCG + F +M ++V +W+ ++ Q G + L+ F M+
Sbjct: 251 NSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMR 310
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
S++ PN TF V+ C + ++ G + + V + + + M + ++ G L
Sbjct: 311 ASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMT-LYSKCGEL 369
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
+M F R +++ S+I A Q G G E L + G +
Sbjct: 370 ASVSKVFCSMKF-------RDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPK 416
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 6/224 (2%)
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
D+ NN ++ +DA +FD + +R VSW II+ V + EA+ F KM+
Sbjct: 48 DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107
Query: 223 ---DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+L +P + + L C N G +H ++ G V + +G+AL+DMY K G
Sbjct: 108 LQSELRIDP--FLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIG 165
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
+G + +F M N TW+A+I GL + GY+E L FS M S + + + L
Sbjct: 166 EIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALK 225
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
A +G + G R H G +++ + + G L
Sbjct: 226 ASADSGALNHG-RSIHTQTLKKGFDENSFVANSLTTMYNKCGKL 268
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/460 (29%), Positives = 236/460 (51%), Gaps = 35/460 (7%)
Query: 75 SKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPF 134
S + AR + + +N+ + W ++ GY E++ +F M+ + P E
Sbjct: 315 SNKIDKARQLF-DKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVT 373
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVF------- 187
VL AC + + G V A + G+ D + N L+ Y C + +A + F
Sbjct: 374 VLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKS 433
Query: 188 --------DDMC----------------ERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
D C E+ +VSWN ++ V++ E+ F KM+
Sbjct: 434 AASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQS 493
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
+PD+TT++ +LS+C ++G L+ G WV++ + + ++ LGTALIDMY KCG V
Sbjct: 494 SNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEM 553
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A +F+++ E NV+ W+AM+ A G A EA++L+ M+ + P++VTF+ +L AC+H
Sbjct: 554 AYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSH 613
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
G+V++GY+YF+++ + I P HY M D+L R GHL+E FI MP +P+ +
Sbjct: 614 GGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWS 673
Query: 404 ALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMK 463
+L+ A H + + + ++L+E++P + V+++N YA+ G W+ VS VR +
Sbjct: 674 SLMRACRSH---HNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLH 730
Query: 464 NVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
G+ K G + +E G +H F + ++ + Q +E
Sbjct: 731 ETGVPKQPGFTMIEQNGVVHEFVASNLVSADILCMLQDIE 770
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/419 (28%), Positives = 196/419 (46%), Gaps = 47/419 (11%)
Query: 14 PPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLS 73
PP + S + + + LK C + + IHA + + L +D +I +++ F L
Sbjct: 21 PPTLNPKTSHSVLRPHWIIDLLKSCSNIREFSPIHAHLITANLIHDPEITSQVLAF--LL 78
Query: 74 SSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYP 133
S NL A IL +Y ++ I WN L+ P+E + + M +G+ T+
Sbjct: 79 SVNNLDCAHQIL-SYSHEPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFH 137
Query: 134 FVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCER 193
F++ AC + + G +V + K G + NNNL+ Y C + ++ C++F+ M R
Sbjct: 138 FLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHR 197
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
V+SWN +I+ V EA+ F +M G PDE TM+ ++S C +L +L +GK +H
Sbjct: 198 DVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLH 257
Query: 254 LQLIE-----RGTVLNCQLGTALIDMYAKCG----------------------------- 279
L +++ RG++LNC L+DMY+KCG
Sbjct: 258 LYIVDNKLWIRGSLLNC-----LVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGY 312
Query: 280 ----AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFL 335
+ AR LF +M E ++ +W+ M+ G Q GY E+LELF M+ ++ P+ V +
Sbjct: 313 VKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALV 372
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
VL AC H + G R H +G+ + + D+ A+ G L EA +P
Sbjct: 373 TVLSACVHLEDFDLG-RSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLP 430
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 174/407 (42%), Gaps = 76/407 (18%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I WN +I Y REA+ +F +M G+ P E T ++ CA++ L G ++
Sbjct: 200 ISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLY 259
Query: 155 VTKSGL---------------------------------DSDVYTNNNLVRFYGSCRRKR 181
+ + L + DV LV Y +
Sbjct: 260 IVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKID 319
Query: 182 DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
A ++FD M ERS+VSW +++ V+ + E++ F +M+ PDE ++ VLSAC
Sbjct: 320 KARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACV 379
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC----------------------- 278
L + LG+ VH ++ G +++ LG AL+D+YAKC
Sbjct: 380 HLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNS 439
Query: 279 --------GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
G V AR F+++ E ++ +W+ M+ +H E+ E+F M++S++ P+
Sbjct: 440 MLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPD 499
Query: 331 YVTFLGVLCACNHAGMVEDG--YRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYT 388
T + +L +C G + G + E + GI M + D+ + G ++ AY
Sbjct: 500 KTTLISLLSSCAKVGALNHGIWVNVYIEKNEI-GIDAML--GTALIDMYGKCGCVEMAYE 556
Query: 389 FIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
I + N V A+++A ++ +G E LE+E RG
Sbjct: 557 -IFTQIIEKNVFVWTAMMAAYAM------EGQALEAIDLYLEMEERG 596
>gi|147784524|emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
Length = 763
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/394 (37%), Positives = 215/394 (54%), Gaps = 25/394 (6%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I G+A+ +EA+ F M+ +G+ P E T +L AC S L +GMQV
Sbjct: 333 VAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGY 392
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVCVENLWLGE 213
+ K GLD DV N L+ Y C RDA F++M C +VSWN I+T C+ + E
Sbjct: 393 INKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMHHDQAEE 452
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT--AL 271
G M PD T+ VL A E ++ +G VH ++ G LNC + L
Sbjct: 453 VFGLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTG--LNCDISVTNGL 510
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
ID+YAKCG++ AR +F + +V +WS++ILG AQ GY EEAL+LF M+ + PN+
Sbjct: 511 IDLYAKCGSLKTARKIFDSVINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNH 570
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
VTF+GVL AC+H G+VE+G++ + ME GI P R H M D+LARAG L EA FI
Sbjct: 571 VTFVGVLTACSHVGLVEEGWQLYGTMEKEFGIVPTREHCSCMVDLLARAGCLNEAEAFIH 630
Query: 392 NMPFQPNPIVLRALLSA-SSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVG 450
M F P+ +V + LL+A S+H A RR L++ + + + +V K+ V
Sbjct: 631 QMAFDPDIVVWKTLLAACKSVHQAL--------ARRTNLKVWKKQHEVITLVKGKFVYVK 682
Query: 451 MWEK--------VSNVR---RFMKNVGLKKMKGM 473
++ +SN++ ++K+V K +K +
Sbjct: 683 QIDREEEACCCSLSNIKFQWHYLKDVRFKALKDL 716
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 199/421 (47%), Gaps = 37/421 (8%)
Query: 20 CNSDLLSKARQCLSFLK----LCCS-KKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSS 74
C L ++A + FL+ C + + Y I A + L++ +I +++ S
Sbjct: 38 CKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGRKIHDHMLKS---KS 94
Query: 75 SKNLTYARSILCNY-----------VNDSVP----IPWNNLIRGYAWSDRPREAVWVFID 119
+LT IL Y V D++P + W ++I GY+ + + A+ +
Sbjct: 95 HPDLTLQNHILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQ 154
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M + G+ P +FT+ ++KAC+ + + G Q+ A+V KS + + N L+ Y
Sbjct: 155 MLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNV 214
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG-FEPDETTMLVVLS 238
DA VF M R ++SW +I + + EA+ YF +M G + P+E V S
Sbjct: 215 IIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFS 274
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
AC+ L G+ +H I+ G + G +L DMYAKCG + CAR++F ++ ++
Sbjct: 275 ACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVA 334
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
W+A+I G A G A+EA+ FS M++ + P+ +T +LCAC + G +
Sbjct: 335 WNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQ------ 388
Query: 359 HVHG-IKPMRIHY-----HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
VHG I M + +T+ + A+ L++A F M + + A+L+A H
Sbjct: 389 -VHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMHH 447
Query: 413 D 413
D
Sbjct: 448 D 448
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 89/165 (53%), Gaps = 7/165 (4%)
Query: 201 IITVCVENLWLGEAVGYFVKM-KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER 259
I T+C + L+ EA+ F + K GF +T ++SAC+ L +L G+ +H +++
Sbjct: 34 ITTLCKQKLF-NEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGRKIHDHMLKS 92
Query: 260 GTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELF 319
+ + L +++MY KCG++ A+ +F M E NV +W+++I G +Q+G ALE +
Sbjct: 93 KSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFY 152
Query: 320 SNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIK 364
M S + P+ TF ++ AC+ G + G + H H +K
Sbjct: 153 FQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQL-----HAHVLK 192
>gi|147864762|emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera]
Length = 641
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 164/484 (33%), Positives = 257/484 (53%), Gaps = 15/484 (3%)
Query: 42 KHLYQIHAQ--IQVSGLQNDAQILKELVRFCTLSSSKNLT-YARSILCNYVN---DSVPI 95
+HL Q A+ + G+ AQI++ +R T++S+ + Y++ L D +P+
Sbjct: 51 QHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPV 110
Query: 96 ----PWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
WN ++ + + +A+ +F+ M++ GI +EFT V+ ACA + E Q+
Sbjct: 111 RSLVSWNTMVGSHTQNGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFECKQL 170
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
K+ LDS+V+ L+ Y C +DA VF+ M ERS V+W+ ++ V+N
Sbjct: 171 HGFALKTALDSNVFVGTALLDVYAKCGLVKDASLVFECMPERSDVTWSSMVAGYVQNELY 230
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
EA+ F + + +G E ++ T+ LSAC L GK V L + G N + ++L
Sbjct: 231 EEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVLCKTGIGSNIFVISSL 290
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
IDMYAKCG + A ++FS +EE NV W+AM+ G ++H + EA+ F M+ I PN
Sbjct: 291 IDMYAKCGIIEEAYIVFSSVEEKNVVLWNAMLSGFSRHVRSLEAMIYFEKMQQMGICPNE 350
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
+T++ VL AC+H G+VE G +YF M VH + P +HY M DIL RAG L EA I
Sbjct: 351 ITYISVLTACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDLID 410
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEV-RRRLLELEPRGSQNLVIVANKYAEVG 450
MPF + +LL++ I Y++ EV + L E+EP + N V+++N YA
Sbjct: 411 RMPFDATASMWGSLLASCRI----YRNLEXAEVAAKHLFEIEPHNAGNHVLLSNIYAANN 466
Query: 451 MWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
WE+V+ R +K KK +G SW+E+ +H F G + + IY LE L MK
Sbjct: 467 RWEEVARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMK 526
Query: 511 VLNF 514
+ +
Sbjct: 527 KIGY 530
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/423 (34%), Positives = 223/423 (52%), Gaps = 7/423 (1%)
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D++P I W +I G + +EAV F +M G +FT+ VL AC L+
Sbjct: 228 DNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALD 287
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
EG Q+ A + ++ +++ + L+ Y CR + A VF M ++V+SW ++
Sbjct: 288 EGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYG 347
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+N + EAV F M+ PD+ T+ V+S+C L +L G H Q + G +
Sbjct: 348 QNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVT 407
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+ ALI +Y KCG++ A LF M+ + +W+A++ G AQ G A E + LF M
Sbjct: 408 VSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHG 467
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
I P+ VTF+GVL AC+ AG+VE GY YF M H I P+ HY M D+L+RAG L+EA
Sbjct: 468 IVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEA 527
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKY 446
FI MPF P+ I LLS+ ++ +G L +LEP+ + +++++ Y
Sbjct: 528 KNFINQMPFSPDAIGWATLLSSCRLNG---NLEIGKWAAESLHKLEPQNPASYILLSSIY 584
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
A G W+ V+ +R+ M+ +G+KK G SW++ +H F + S IY LE+L
Sbjct: 585 AAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLY 644
Query: 507 LHM 509
L M
Sbjct: 645 LKM 647
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 172/373 (46%), Gaps = 40/373 (10%)
Query: 72 LSSSKNLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRG-IK 126
LS+ L Y + + V DS+P + WN+L+ GYA + E+V V+ M + G +
Sbjct: 78 LSAYSKLGYLQDM--QRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVN 135
Query: 127 PTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGS---------- 176
T+ +L + ++ G Q+ + K G S ++ + LV Y
Sbjct: 136 LNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRI 195
Query: 177 ---------------------CRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
CR +A ++FD+M E+ +SW IIT +N EAV
Sbjct: 196 FEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAV 255
Query: 216 GYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMY 275
F +M GF D+ T VL+AC L GK +H +I N +G+AL+DMY
Sbjct: 256 DKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMY 315
Query: 276 AKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFL 335
KC V A +F +M NV +W+AM++G Q+GY+EEA+ +F +M+ + I P+ T
Sbjct: 316 CKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLG 375
Query: 336 GVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPF 395
V+ +C + +E+G + FH G+ + + + + G L+ A+ M
Sbjct: 376 SVISSCANLASLEEGAQ-FHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKI 434
Query: 396 QPNPIVLRALLSA 408
+ + + AL+S
Sbjct: 435 R-DEVSWTALVSG 446
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 138/314 (43%), Gaps = 20/314 (6%)
Query: 122 RRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKR 181
R P F Y ++ ++ L V ++ + L ++ N L+ Y +
Sbjct: 33 RTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNL----FSWNTLLSAYSKLGYLQ 88
Query: 182 DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG-YFVKMKDLGFEPDETTMLVVLSAC 240
D +VFD M VVSWN +++ N + E+V Y + +KD + T +L
Sbjct: 89 DMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILS 148
Query: 241 TELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
+ G + LG+ +H Q+ + G +G+ L+DMYAK G + A +F + E N+ ++
Sbjct: 149 SNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYN 208
Query: 301 AMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHV 360
MI GL + + EA +LF NM + +++ ++ G+ ++ F EM
Sbjct: 209 TMITGLLRCRFIVEAEQLFDNMPEK----DSISWTTIITGLTQNGLFKEAVDKFKEM--- 261
Query: 361 HGIKPMRIHYHTMADILARAGHL------KEAYTFIMNMPFQPNPIVLRALLSA-SSIHD 413
GI+ + T +L G K+ + +I+ +Q N V ALL +
Sbjct: 262 -GIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRN 320
Query: 414 AKYQDGVGNEVRRR 427
KY + V ++R +
Sbjct: 321 VKYAEAVFRKMRHK 334
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 91/210 (43%), Gaps = 16/210 (7%)
Query: 235 VVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI 294
L C E N + K +H ++I T L LI+ Y K G + AR +F + +
Sbjct: 10 AALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQP 69
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYF 354
N+++W+ ++ ++ GY ++ +F +M N + V++ +L G++ + R +
Sbjct: 70 NLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDV----VSWNSLLSGYAGNGLISESVRVY 125
Query: 355 HEMEHVHGIKPMRIHYHTMADILARAGHL---KEAYTFIMNMPFQPNPIVLRALLSASSI 411
+ M + RI + TM + + G + ++ + I +Q L S +
Sbjct: 126 NMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQS------YLFVGSPL 179
Query: 412 HDAKYQDGVGNEVRRRLLELEPRGSQNLVI 441
D + G N+ R E+ + N+V+
Sbjct: 180 VDMYAKTGFINDANRIFEEIPEK---NIVV 206
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 142/465 (30%), Positives = 235/465 (50%), Gaps = 14/465 (3%)
Query: 46 QIHAQIQVSGLQNDAQI---LKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIR 102
QIH+ SGL ++A + + + C L + + +++ + W ++
Sbjct: 132 QIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEK------MSEKNAVAWTGIMV 185
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
GY ++R +A+ +F M G++ E+ + VLKACA + LN G Q+ ++ K GL+S
Sbjct: 186 GYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLES 245
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
+V LV FY C A K F+ + E + VSW+ +IT + EA+ F ++
Sbjct: 246 EVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLR 305
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
+ + T + AC+ L + + G H I+ V +A+I MY++CG +
Sbjct: 306 TRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLD 365
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
A +F +++ + W+A+I G A G A EAL+LF M++ + PN VTF+ VL AC+
Sbjct: 366 YATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACS 425
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVL 402
H+G+V +G +Y M +G+ HY M DI +RAG L+EA I +MPF P+ +
Sbjct: 426 HSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSW 485
Query: 403 RALLSASSIHDAKYQD-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRF 461
+ LL Y++ +G L +L+P + +++ N YA G W++ +NVR+
Sbjct: 486 KCLLGGC----WTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKM 541
Query: 462 MKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
M L+K SW+ + G +HRF G + IY LE LN
Sbjct: 542 MAERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEALN 586
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 176/391 (45%), Gaps = 22/391 (5%)
Query: 27 KARQCLSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKE--LVRFCTLSSSKNLTYA 81
++ +CL + C K L+ H Q+Q + ++N + L+ L +C S L A
Sbjct: 11 RSYKCL--FEACGKIKSLFDGRLFHEQMQRT-VKNPPEFLENSVLKMYCKCGS---LADA 64
Query: 82 RSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAE 141
R + + + + + WN +I YA + + +F +M KP TY L++
Sbjct: 65 RKVF-DEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLN 123
Query: 142 ISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVI 201
SGL G Q+ ++ +SGL S+ N + Y C A VF+ M E++ V+W I
Sbjct: 124 PSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGI 183
Query: 202 ITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGT 261
+ + +A+ F KM + G E DE +VL AC L L+ G+ +H +++ G
Sbjct: 184 MVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGL 243
Query: 262 VLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSN 321
+GT L+D Y KC + A F + E N +WSA+I G Q G EEAL+ F +
Sbjct: 244 ESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFES 303
Query: 322 MKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH----TMADIL 377
++ S+ N T+ + AC+ G + H IK + Y M +
Sbjct: 304 LRTRSVDINSFTYTSIFQACSALADFNSGAQ-----AHADAIKSSLVAYQHGESAMITMY 358
Query: 378 ARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
+R G L A T + P+ + A+++
Sbjct: 359 SRCGRLDYA-TRVFESIDDPDAVAWTAIIAG 388
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 138/290 (47%), Gaps = 4/290 (1%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M+ GI + +Y + +AC +I L +G + ++ + + N++++ Y C
Sbjct: 1 MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
DA KVFD+M ER++VSWN II+ EN + F M +L +P+ +T + L +
Sbjct: 61 LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
L +GK +H I G N + TA+ +MY KCG + A L+F +M E N W
Sbjct: 121 LLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAW 180
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGY-RYFHEME 358
+ +++G Q +AL LF+ M N + + F VL AC AG+ E + R H
Sbjct: 181 TGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKAC--AGLEELNFGRQIHGHI 238
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
G++ + D + +L+ A T +PN + AL++
Sbjct: 239 VKLGLESEVSVGTPLVDFYVKCSNLESA-TKAFEWISEPNDVSWSALITG 287
>gi|297737809|emb|CBI27010.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 153/456 (33%), Positives = 235/456 (51%), Gaps = 39/456 (8%)
Query: 78 LTYARSILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKP-TEFTY 132
+TYAR + D +P P WN++ RGYA S+ RE +F +M R + T
Sbjct: 1 MTYARQLF-----DQIPDPNIALWNSMFRGYAQSESYRE---IFCEMFERNVVAWTSMIN 52
Query: 133 PFVLKA--------------------CAEISGLNEG--MQVQANVTKSGLDSDVYTNNNL 170
++L A +SG EG M + + DV N +
Sbjct: 53 GYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMFWNTV 112
Query: 171 VRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM-KDLGFEPD 229
++ Y + +F++M ER++ SWN +I N E +G F +M + P+
Sbjct: 113 LKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPN 172
Query: 230 ETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFS 289
+ T++ VLSAC LG L LGKWVH+ G N +G AL+DMYAKCG + A +F
Sbjct: 173 DATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFR 232
Query: 290 RMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVED 349
M+ ++ +W+ +I GLA H +AL LF MKN+ P+ +TF+G+LCAC H G+VED
Sbjct: 233 GMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVED 292
Query: 350 GYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSAS 409
G+ YF M + I P HY M D+LARAG L++A F+ MP + + ++ LL A
Sbjct: 293 GFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGAC 352
Query: 410 SIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKK 469
I+ + +RL+ELEP+ N V+++N Y + G WE V+ ++ M++ G KK
Sbjct: 353 RIYK---NVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKK 409
Query: 470 MKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+ G S +E+ ++ FYS + ++ IY +L L
Sbjct: 410 LPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGL 445
>gi|356565918|ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Glycine max]
Length = 703
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 149/475 (31%), Positives = 251/475 (52%), Gaps = 17/475 (3%)
Query: 46 QIHAQIQVSGLQNDAQILKELV----RFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
Q+H +I GL+ + + C+L ++ + + ++LC + + WN+++
Sbjct: 216 QLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERV-FDGAVLCRDL-----VTWNSML 269
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
Y ++ A VF+DM+ G +P +TY ++ AC+ G + V K GLD
Sbjct: 270 GAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYTGIVGACSVQEHKTCGKCLHGLVIKRGLD 329
Query: 162 SDVYTNNNLVRFY--GSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
+ V +N L+ Y + R DA ++F M + +WN I+ V+ +A+ F+
Sbjct: 330 NSVPVSNALISMYIRFNDRCMEDALRIFFSMDLKDCCTWNSILAGYVQVGLSEDALRLFL 389
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+M+ L E D T V+ +C++L L LG+ H+ ++ G N +G++LI MY+KCG
Sbjct: 390 QMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQFHVLALKVGFDTNSYVGSSLIFMYSKCG 449
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
+ AR F + N W+++I G AQHG AL+LF MK + +++TF+ VL
Sbjct: 450 IIEDARKSFEATSKDNAIVWNSIIFGYAQHGQGNIALDLFYMMKERKVKLDHITFVAVLT 509
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
AC+H G+VE+G + ME GI P + HY D+ RAGHLK+A + MPF+P+
Sbjct: 510 ACSHNGLVEEGCNFIESMESDFGIPPRQEHYACAIDLYGRAGHLKKATALVETMPFEPDA 569
Query: 400 IVLRALLSASSI-HDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
+VL+ LL A D + + +++ + LLELEP VI++ Y MW + ++V
Sbjct: 570 MVLKTLLGACRFCGDIE----LASQIAKILLELEPEEHCTYVILSEMYGRFKMWGEKASV 625
Query: 459 RRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLN 513
R M+ G+KK+ G SW+E+ ++H F + S + IY +L+ LN +K+ +
Sbjct: 626 TRMMRERGVKKVPGWSWIEVKNNVHAFNAEDHSHPQCEEIYILLQQLNEGIKLFD 680
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 120/266 (45%), Gaps = 19/266 (7%)
Query: 89 VNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEF-TYPFVLKACAEIS 143
V D +P + WN +I +A S + W + RR + T+ +LK A +
Sbjct: 50 VFDEMPHRDTVSWNAIISAFA-SSGDLDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVG 108
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
L G Q+ + + K GL +V++ + L+ Y C R D VF M ER+ VSWN ++
Sbjct: 109 KLKLGQQLHSVMLKVGLSENVFSGSALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVA 168
Query: 204 V------CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLI 257
C W+ M+ G E D+ T+ +L+ L +H +++
Sbjct: 169 SYSRVGDCDMAFWVLSC------MELEGVEIDDGTVSPLLTLLDNAMFYKLTMQLHCKIV 222
Query: 258 ERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEI-NVWTWSAMILGLAQHGYAEEAL 316
+ G L + A I Y++C ++ A +F ++ TW++M+ H + A
Sbjct: 223 KHGLELFNTVCNATITAYSECCSLQDAERVFDGAVLCRDLVTWNSMLGAYLMHEKEDLAF 282
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACN 342
++F +M+N P+ T+ G++ AC+
Sbjct: 283 KVFLDMQNFGFEPDAYTYTGIVGACS 308
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 86/180 (47%), Gaps = 7/180 (3%)
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
K G +D YT NNL+ Y C A +VFD+M R VSWN II+ + L
Sbjct: 21 KLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGDLDTTWQ 80
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
M+ D T +L +G L LG+ +H +++ G N G+AL+DMYA
Sbjct: 81 LLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGSALLDMYA 140
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK-------NSSISP 329
KCG V ++F M E N +W+ ++ ++ G + A + S M+ + ++SP
Sbjct: 141 KCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGVEIDDGTVSP 200
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 1/143 (0%)
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
H + I+ G++ + LI YAKC + A +F M + +W+A+I A G
Sbjct: 15 THCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGD 74
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
+ +L M+ S+ + + TF +L + G ++ G + M V G+
Sbjct: 75 LDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKV-GLSENVFSGS 133
Query: 372 TMADILARAGHLKEAYTFIMNMP 394
+ D+ A+ G + + Y +MP
Sbjct: 134 ALLDMYAKCGRVDDGYVVFQSMP 156
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/471 (31%), Positives = 236/471 (50%), Gaps = 12/471 (2%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGY-- 104
IHA + G + D + LV T+ + + L + D I WN + G
Sbjct: 437 IHACVWKYGFETDVAVSNALV---TMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHD 493
Query: 105 -AWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD 163
DRP + +F M G P +T+ +L +C+ + ++ G QV A++ K+ LD +
Sbjct: 494 CGMYDRP---LTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDN 550
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
+ L+ Y C DA F+ + R + +W VIIT + +A+ YF +M+
Sbjct: 551 NFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQ 610
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G +P+E T+ LS C+ L +L G+ +H + + G V + +G+AL+DMYAKCG +
Sbjct: 611 EGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEE 670
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A LF + + W+ +I G AQ+G +AL F M + ISP+ VTF G+L AC+H
Sbjct: 671 AEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSH 730
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
G+VE+G +F+ M GI P H M DIL R G E FI M N ++
Sbjct: 731 QGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWE 790
Query: 404 ALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMK 463
+L AS +H+ +G + +L EL+P + ++++N +A G W+ V VR M
Sbjct: 791 TVLGASKMHNNLV---LGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMS 847
Query: 464 NVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ G+KK G SWVE G +H F S S ++ I+ L+ L+ + + +
Sbjct: 848 SKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQY 898
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 158/321 (49%), Gaps = 6/321 (1%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S L+ C SK+ L IH I + D+ + LV + + YAR +L
Sbjct: 117 SMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVN--VYAKCRYSAYARLVLAKMP 174
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+ V + W LI+G +++++F +M+ GI P EFT LKAC+ L+ G
Sbjct: 175 DRDV-VSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGK 233
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ A K GL D++ + LV Y C A K+F M E++ V+WNV++ +
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRG 293
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+ + F M +L + +E T+ VL C NL G+ +H +I+ G N +G
Sbjct: 294 DVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGC 353
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
L+DMY+KCG A +F +++ ++ WSA+I L Q G +EE+++LF M+ P
Sbjct: 354 GLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLP 413
Query: 330 NYVTFLGVLCACNHAGMVEDG 350
N T +L A + G ++ G
Sbjct: 414 NQYTICSLLSAATNTGNLQYG 434
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 132/297 (44%), Gaps = 3/297 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HAQ GL D + LV L I ND + WN L+ GYA
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQND---VTWNVLLNGYA 290
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ +F M +K EFT VLK CA L +G + + + K G + + +
Sbjct: 291 QRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEF 350
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
LV Y C DA VF + + +V W+ +IT + E++ F M+
Sbjct: 351 IGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGD 410
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
P++ T+ +LSA T GNL G+ +H + + G + + AL+ MY K G V
Sbjct: 411 TLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGT 470
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
L+ M + ++ +W+A + GL G + L +F +M PN TF+ +L +C+
Sbjct: 471 KLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS 527
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 109/219 (49%)
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
Y +L+ CA L + + K ++ D + +LV Y CR A V M
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
+R VVSW +I V + +++ F +M++ G P+E T+ L AC+ L LGK
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+H Q + G +L+ +G+AL+D+YAKCG + A +F M E N TW+ ++ G AQ G
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
L+LF +M + N T VL C ++ ++ G
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQG 333
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/399 (33%), Positives = 211/399 (52%), Gaps = 26/399 (6%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W ++I GY R A+ + M++ G+K +L ACA L+ G V
Sbjct: 318 VSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDY 377
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ + ++S+++ N L+ Y C A VF M + ++SWN +I GE
Sbjct: 378 IKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMI---------GE- 427
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+PD TM +L AC L L GK +H ++ G + + AL+D+
Sbjct: 428 -----------LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDL 476
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y KCG +G ARLLF + ++ +W+ MI G HGY EA+ F+ M+++ I P+ V+F
Sbjct: 477 YVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSF 536
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ +L AC+H+G++E G+R+F+ M++ I+P HY M D+L+R G+L +AY FI +P
Sbjct: 537 ISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLP 596
Query: 395 FQPNPIVLRALLSASSI-HDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
P+ + ALL I HD + + +V R+ ELEP + V++AN YAE WE
Sbjct: 597 IAPDATIWGALLCGCRIYHDIE----LAEKVAERVFELEPENTGYYVLLANIYAEAEKWE 652
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQ 492
+V +R + GL+K G SW+E+ G ++ F SG +S
Sbjct: 653 EVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSS 691
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 137/294 (46%), Gaps = 20/294 (6%)
Query: 100 LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
L+ YA +E VF M+++ + + + F++ A+I E + + + + G
Sbjct: 140 LVSLYATCGDLKEGRRVFDTMEKKNV----YLWNFMVSEYAKIGDFKESICLFKIMVEKG 195
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
++ +R A ++FD +C+R V+SWN +I+ V N + +
Sbjct: 196 IEG---------------KRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYK 240
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+M LG + D T++ VL C G LSLGK VH I+ L+DMY+KCG
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCG 300
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
+ A +F +M E NV +W++MI G + G ++ A+ L M+ + + V +L
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILH 360
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNM 393
AC +G +++G + H+ + ++ + + D+ + G + A + M
Sbjct: 361 ACARSGSLDNG-KDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTM 413
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 103/269 (38%), Gaps = 62/269 (23%)
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
E + T VL C +L+ GK VH + ++ LG L+ +YA CG + R
Sbjct: 96 ELETKTYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRR 155
Query: 287 LFSRMEEINVW------------------------------------------------- 297
+F ME+ NV+
Sbjct: 156 VFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRD 215
Query: 298 --TWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
+W++MI G +G E LE++ M I + T + VL C ++G + G + H
Sbjct: 216 VISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLG-KAVH 274
Query: 356 EMEHVHGIKPMRIHY-HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDA 414
+ + RI++ +T+ D+ ++ G L A M R ++S +S+
Sbjct: 275 SLA-IKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMG-------ERNVVSWTSMIAG 326
Query: 415 KYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
+DG + R L ++E G + L +VA
Sbjct: 327 YTRDGRSDGAIRLLQQMEKEGVK-LDVVA 354
>gi|449521058|ref|XP_004167548.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 376
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 136/367 (37%), Positives = 208/367 (56%), Gaps = 6/367 (1%)
Query: 44 LYQIHAQIQVSGL--QNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
L Q+HA I L + A L ++V FC LS N+ YARS+ + ++ WN+LI
Sbjct: 4 LRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNI-FSWNSLI 62
Query: 102 RGYAW-SDRPREAVWVFIDMKRRGIK-PTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
+GY+ +E +++F + G P FT FVLKACA ++ EG+QV ++V K G
Sbjct: 63 KGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLKDG 122
Query: 160 LDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFV 219
S ++ +LV FYG C A KVF++M R++V+W +I+ + EA+ F
Sbjct: 123 FGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMELFR 182
Query: 220 KMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCG 279
+M+ G +PD T++ V+SAC G L +G W+H + + + + +L TAL+DMYAKCG
Sbjct: 183 EMQKAGIQPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALVDMYAKCG 242
Query: 280 AVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLC 339
+ A+ +F M + WS+MI+G A HG A++A++ F M + ++P++VTFL VL
Sbjct: 243 CIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAVLS 302
Query: 340 ACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
AC H G+V G R++ M GI+P HY D+L R+G ++EAY M PN
Sbjct: 303 ACAHGGLVSRGRRFWSLMLEF-GIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKIPPNA 361
Query: 400 IVLRALL 406
R+LL
Sbjct: 362 ATWRSLL 368
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 157/449 (34%), Positives = 229/449 (51%), Gaps = 36/449 (8%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W+ LI Y ++ EA+ +F +M GI E VL AC+ + + G V
Sbjct: 255 VSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGL 314
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV-------- 206
V K G+++ V N L+ Y SC A K+F + C +SWN +I+ V
Sbjct: 315 VVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKA 374
Query: 207 ----------ENL-WLGEAVGY------------FVKMKDLGFEPDETTMLVVLSACTEL 243
+N+ W GY F +M+ G +PDET ++ V+SACT L
Sbjct: 375 RALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHL 434
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
L GKW+H + + G +N LGT LI+MY K G V A +F +EE V TW+A+I
Sbjct: 435 AALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALI 494
Query: 304 LGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
LGLA +G +++L+ FS MK ++PN +TF+ VL AC H G+V++G+R+F+ M H I
Sbjct: 495 LGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKI 554
Query: 364 KPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG-VGN 422
P HY M D+L RAG LKEA I +MP P+ ALL A KY D G
Sbjct: 555 GPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACK----KYGDNETGE 610
Query: 423 EVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSI 482
+ R+L+EL P V+++N YA G W V VR M+ G+ K G S +E G +
Sbjct: 611 RIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRV 670
Query: 483 HRFYSGYDSQVELAGIYQILETLNLHMKV 511
H F +G + + I +L+ + +K+
Sbjct: 671 HEFLAGDKTHPQNEHIEHMLDEMAKKLKL 699
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 146/318 (45%), Gaps = 40/318 (12%)
Query: 33 SFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDS 92
+ L+ C + K QI +Q+ +SG D+ L++F T N+ + I + N +
Sbjct: 31 THLQKCQNIKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPN 90
Query: 93 VPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQ 152
I N +++GY + P +A+WV+ M + +TYP + ++C+ +G +Q
Sbjct: 91 GFI-CNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQ 149
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
+V K G DSDVY N L+ Y C DA KVFD +VSWN ++
Sbjct: 150 DHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLA--------- 200
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
GY + +GN+ K V+ ++ ER + + ++I
Sbjct: 201 ---GYVL-----------------------VGNVEEAKDVYDRMPERNVIAS----NSMI 230
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
++ K G V A LF+ M++ ++ +WSA+I Q+ EEAL LF M + I + V
Sbjct: 231 VLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEV 290
Query: 333 TFLGVLCACNHAGMVEDG 350
L VL AC+ +V G
Sbjct: 291 VVLSVLSACSRLLVVITG 308
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 120/257 (46%), Gaps = 32/257 (12%)
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK 220
+ +V +N+++ +G +ACK+F++M ++ +VSW+ +I+ +N EA+ F +
Sbjct: 220 ERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKE 279
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA---- 276
M G DE +L VLSAC+ L + GK VH +++ G L ALI MY+
Sbjct: 280 MNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEE 339
Query: 277 ---------------------------KCGAVGCARLLFSRMEEINVWTWSAMILGLAQH 309
KCG + AR LF M + + +WSAMI G AQ
Sbjct: 340 VVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQ 399
Query: 310 GYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIH 369
E L LF M+ P+ + V+ AC H ++ G ++ H +G+K I
Sbjct: 400 DRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQG-KWIHAYIRKNGLKINIIL 458
Query: 370 YHTMADILARAGHLKEA 386
T+ ++ + G +++A
Sbjct: 459 GTTLINMYMKLGCVEDA 475
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 112/229 (48%), Gaps = 6/229 (2%)
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
DS+P + W+ +I GYA DR E + +F +M+ G KP E V+ AC ++ L+
Sbjct: 379 DSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALD 438
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
+G + A + K+GL ++ L+ Y DA +VF + E+ V +WN +I
Sbjct: 439 QGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLA 498
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNC 265
N + +++ F +MK+ G P+E T + VL AC +G + G +I+ + N
Sbjct: 499 MNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNI 558
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAE 313
+ ++D+ + G + A L M +V TW A++ ++G E
Sbjct: 559 KHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNE 607
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 106/243 (43%), Gaps = 19/243 (7%)
Query: 125 IKPTEFTYPFV---LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCR--R 179
+KPT T P + L+ C I N Q+ + + SG D + + L++F
Sbjct: 20 LKPT-LTLPILETHLQKCQNIKQFN---QILSQMILSGFFKDSFAASRLLKFSTELPFIN 75
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
+ ++F + + N ++ ++ +A+ + M + D T ++ +
Sbjct: 76 INQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQS 135
Query: 240 CT-ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
C+ L GK + +++ G + + LI+MYA CG + AR +F +++ +
Sbjct: 136 CSIRLAEFD-GKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVS 194
Query: 299 WSAMILGLAQHGYAEEALELFSNM--KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHE 356
W++M+ G G EEA +++ M +N S + + G G VE+ + F+E
Sbjct: 195 WNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFG------KKGNVEEACKLFNE 248
Query: 357 MEH 359
M+
Sbjct: 249 MKQ 251
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 162/474 (34%), Positives = 237/474 (50%), Gaps = 47/474 (9%)
Query: 78 LTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLK 137
L AR + + +D + W +I GYA D EA+ VF M ++P E T V+
Sbjct: 308 LKNARQVF-DESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVS 366
Query: 138 ACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS 197
AC+++ L G +V V + + + +N L+ Y C DA ++FD M + V S
Sbjct: 367 ACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYS 426
Query: 198 WNVII-----------------------TVCVENLWLG--------EAVGYFVKMKDLGF 226
W ++ VC + G E++ F +M + G
Sbjct: 427 WTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGV 486
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNCQLGTALIDMYAKCGAVGCAR 285
P E T++ VLSAC +L L+LG W+H + + L+ L A++DMYAKCG++ A
Sbjct: 487 VPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAAT 546
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+FS M E N+ +W+ MI G A +G A++A+ +F M+N PN +TF+ +L AC+H G
Sbjct: 547 EVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGG 606
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
++ +G YF ME +GIKP R HY M D+L R G L+EAY I NMP QP AL
Sbjct: 607 LISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGAL 666
Query: 406 LSASSIHDAKYQDGVGN-EVRR----RLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRR 460
L+A +H GN E+ R LL L+P S V++AN A W V VR
Sbjct: 667 LNACRMH--------GNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRS 718
Query: 461 FMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
MK+ G+KK+ G S +E+ G F +S + IY+ LE NL K L +
Sbjct: 719 LMKDKGVKKIPGYSLIEIDGGFVEFLVADESHPQSEEIYK-LECDNLSSKKLTW 771
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 182/352 (51%), Gaps = 9/352 (2%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
L ++ C + + L QI A++ ++G+ A + ++ FC L+ S +L YA +I N V
Sbjct: 161 LLIMESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIF-NRVEQ 219
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
WN +IRGY + +P A F+ M + ++ ++ F LKAC + + EG V
Sbjct: 220 PNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGESV 279
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
V K G D ++ N L+ FY ++A +VFD+ ++ VV+W +I +
Sbjct: 280 YCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCS 339
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
EA+ F M EP+E T++ V+SAC+++GNL +GK VH ++ E+ + L AL
Sbjct: 340 EEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNAL 399
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
+DMY KC + AR LF RM +V++W++M+ G A+ G E A F + + N
Sbjct: 400 LDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFF----DQTPRKNA 455
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
V + ++ + ++ + FHEM G+ P+ HT+ +L+ G L
Sbjct: 456 VCWSAMIAGYSQNNKPKESLKLFHEMME-RGVVPIE---HTLVSVLSACGQL 503
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 142/420 (33%), Positives = 229/420 (54%), Gaps = 11/420 (2%)
Query: 95 IPWNN------LIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEG 148
IP+++ +I YA S++ +A +F+ + R + P E++ VL+AC + L+ G
Sbjct: 324 IPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFG 383
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
Q+ + K G +SD++ N L+ FY C + K+F + + + VSWN I+ ++
Sbjct: 384 KQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQS 443
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN-CQL 267
EA+ F +M+ + T VL AC ++ +H IE+ T N +
Sbjct: 444 GLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCS-IEKSTFNNDTVI 502
Query: 268 GTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI 327
G +LID YAKCG + A +F + E ++ +W+A+I G A HG A +ALELF M S++
Sbjct: 503 GNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNV 562
Query: 328 SPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
N +TF+ +L C+ G+V G F M HGIKP HY + +L RAG L +A
Sbjct: 563 ESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDAL 622
Query: 388 TFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYA 447
FI ++P P+ +V RALLS+ IH +G ++LE+EP+ V+++N YA
Sbjct: 623 QFIGDIPSAPSAMVWRALLSSCIIHK---NVALGRFSAEKILEIEPQDETTYVLLSNMYA 679
Query: 448 EVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNL 507
G ++V+ +R+ M+N+G++K+ G+SWVE+ G IH F G ++ I +LE LNL
Sbjct: 680 AAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNL 739
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 157/338 (46%), Gaps = 12/338 (3%)
Query: 85 LCNYVNDSV----------PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPF 134
LC+ V+D+ + W ++ Y+ +D P A VF M+ G KP F
Sbjct: 209 LCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTS 268
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
VLKA + + G + K+ D++ + L+ Y C +DA F+ +
Sbjct: 269 VLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDD 328
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHL 254
V+ + +I+ ++ +A F+++ P+E ++ VL ACT + L GK +H
Sbjct: 329 VILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHN 388
Query: 255 QLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEE 314
I+ G + +G AL+D YAKC + + +FS + + N +W+ +++G +Q G EE
Sbjct: 389 HAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEE 448
Query: 315 ALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMA 374
AL +F M+ + + VT+ VL AC + + +E + +++
Sbjct: 449 ALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEK-STFNNDTVIGNSLI 507
Query: 375 DILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
D A+ G++++A ++ + + I A++S ++H
Sbjct: 508 DTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYALH 544
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 120/270 (44%), Gaps = 5/270 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ + L++ +A A +F ++ G + +F +LK + V +
Sbjct: 128 VSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSC 187
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K G D + + + L+ Y C DA VF+ + + V W +++ EN A
Sbjct: 188 AWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENA 247
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
F KM+ G +P+ + VL A L ++ LGK +H I+ +G AL+DM
Sbjct: 248 FRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDM 307
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCG + ARL F + +V S MI AQ E+A ELF + SS+ PN +
Sbjct: 308 YAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSL 367
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIK 364
VL AC + ++ F + H H IK
Sbjct: 368 SSVLQACTNMVQLD-----FGKQIHNHAIK 392
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 109/220 (49%), Gaps = 6/220 (2%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S L+ C + L QIH G ++D + L+ F + ++ + I + +
Sbjct: 369 SVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDF--YAKCNDMDSSLKIFSS-L 425
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
D+ + WN ++ G++ S EA+ VF +M+ + T+ TY VL+ACA + +
Sbjct: 426 RDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAG 485
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ ++ KS ++D N+L+ Y C RDA KVF + ER ++SWN II+ +
Sbjct: 486 QIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHG 545
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
+A+ F +M E ++ T + +LS C+ G ++ G
Sbjct: 546 QAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHG 585
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 129/308 (41%), Gaps = 25/308 (8%)
Query: 115 WVFIDMKRRGIKPT-----EFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS--DVYTN 167
W+ ++ I P+ F L+ C G V +V + G D++
Sbjct: 40 WLEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCA 99
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
N L+ YG A ++FD M ER++VS+ ++ + A F +++ G E
Sbjct: 100 NVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHE 159
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
++ + +L + L VH + G N +G+ LID Y+ C V A +
Sbjct: 160 VNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHV 219
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA--CNHAG 345
F+ + + W+AM+ +++ E A +FS M+ S PN VL A C +
Sbjct: 220 FNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSV 279
Query: 346 MVEDG-----YRYFHEME-HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNP 399
++ G + ++ E HV G + D+ A+ G +K+A +P+ +
Sbjct: 280 VLGKGIHGCAIKTLNDTEPHVGG---------ALLDMYAKCGDIKDARLAFEMIPYD-DV 329
Query: 400 IVLRALLS 407
I+L ++S
Sbjct: 330 ILLSFMIS 337
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/435 (33%), Positives = 244/435 (56%), Gaps = 16/435 (3%)
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
+L+YA+ + + +V WN LI G+A S+ PR ++ + MK G+ P FT +L
Sbjct: 445 SLSYAQRVFHGIRSKTVN-SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 503
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
AC+++ L G +V + ++ L+ D++ +++ Y C +FD M ++S+V
Sbjct: 504 SACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLV 563
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHL-- 254
SWN +IT ++N + A+G F +M G + +M+ V AC+ L +L LG+ H
Sbjct: 564 SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 623
Query: 255 --QLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
L+E + C +LIDMYAK G++ + +F+ ++E + +W+AMI+G HG A
Sbjct: 624 LKHLLEDDAFIAC----SLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLA 679
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
+EA++LF M+ + +P+ +TFLGVL ACNH+G++ +G RY +M+ G+KP HY
Sbjct: 680 KEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYAC 739
Query: 373 MADILARAGHLKEAYTFIM-NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLEL 431
+ D+L RAG L +A + M + + + ++LLS+ IH +G +V +L EL
Sbjct: 740 VIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLE---MGEKVAAKLFEL 796
Query: 432 EPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG--- 488
EP +N V+++N YA +G WE V VR+ M + L+K G SW+EL + F G
Sbjct: 797 EPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERF 856
Query: 489 YDSQVELAGIYQILE 503
D E+ ++ ILE
Sbjct: 857 LDGFEEIKSLWSILE 871
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 158/335 (47%), Gaps = 15/335 (4%)
Query: 21 NSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQ--VSG---LQNDAQILKELVRFCTLSSS 75
+SD R+ L L K+ ++ +I VSG L+ND + ++ + S
Sbjct: 76 SSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGS 135
Query: 76 KNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPF 134
+ + + + + WN +I Y+ ++ E + FI+M + P FTYP
Sbjct: 136 PDDS---RFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPC 192
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
V+KACA +S + G+ V V K+GL DV+ N LV FYG+ DA ++FD M ER+
Sbjct: 193 VIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERN 252
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKM----KDLGFEPDETTMLVVLSACTELGNLSLGK 250
+VSWN +I V +N + E+ +M D F PD T++ VL C + LGK
Sbjct: 253 LVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGK 312
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
VH ++ L AL+DMY+KCG + A+++F NV +W+ M+ G + G
Sbjct: 313 GVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG 372
Query: 311 YAEEALELFSNM--KNSSISPNYVTFLGVLCACNH 343
++ M + + VT L + C H
Sbjct: 373 DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 124/291 (42%), Gaps = 35/291 (12%)
Query: 48 HAQIQVSGLQNDAQILKELVRFCTLSSS-----------------KNLTYARSILCNYVN 90
H Q+++SGL D+ + L+ C+ S ++L S+L Y++
Sbjct: 484 HLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIH 543
Query: 91 ---------------DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFV 135
D + WN +I GY + P A+ VF M GI+ + V
Sbjct: 544 CGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 603
Query: 136 LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSV 195
AC+ + L G + A K L+ D + +L+ Y + KVF+ + E+S
Sbjct: 604 FGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKST 663
Query: 196 VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG-KWVHL 254
SWN +I + EA+ F +M+ G PD+ T L VL+AC G + G +++
Sbjct: 664 ASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQ 723
Query: 255 QLIERGTVLNCQLGTALIDMYAKCGAVGCA-RLLFSRM-EEINVWTWSAMI 303
G N + +IDM + G + A R++ M EE +V W +++
Sbjct: 724 MKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLL 774
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 128/305 (41%), Gaps = 15/305 (4%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H + +GL D + LV F + L + + + + WN++IR ++
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSF---YGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 265
Query: 107 SDRPREAVWVFIDMKRR----GIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
+ E+ + +M P T VL CA + G V K LD
Sbjct: 266 NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK 325
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
++ NN L+ Y C +A +F ++VVSWN ++ G+ G F ++
Sbjct: 326 ELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAE---GDTHGTFDVLR 382
Query: 223 DL-----GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
+ + DE T+L + C L K +H +++ V N + A + YAK
Sbjct: 383 QMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAK 442
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CG++ A+ +F + V +W+A+I G AQ +L+ MK S + P+ T +
Sbjct: 443 CGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSL 502
Query: 338 LCACN 342
L AC+
Sbjct: 503 LSACS 507
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 150/493 (30%), Positives = 246/493 (49%), Gaps = 39/493 (7%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+IH + GL D + L+ + YAR + + V + W+ +IR +
Sbjct: 145 EIHGFVLKKGLDRDVFVGNALMLM--YGECACVEYARLVFDKMMERDV-VSWSTMIRSLS 201
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD-- 163
+ A+ + +M ++P+E ++ A+ + + G + A V ++ +
Sbjct: 202 RNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMG 261
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN--------------- 208
V T L+ Y C A ++F+ + +++VVSW +I C+ +
Sbjct: 262 VPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQN 321
Query: 209 ----LW------------LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
+W + +A F +M+ G P + T++ +LS C G L LGKWV
Sbjct: 322 RDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWV 381
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H + + ++C L TAL+DMYAKCG + A LF ++ W+A+I G A HGY
Sbjct: 382 HSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYG 441
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
EEAL++F+ M+ + PN +TF+G+L AC+HAG+V +G + F +M H G+ P HY
Sbjct: 442 EEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGC 501
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELE 432
M D+L RAG L EA+ I +MP +PN IV AL++A +H +G +LLE+E
Sbjct: 502 MVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHK---NPQLGELAATQLLEIE 558
Query: 433 PRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQ 492
P V+++N YA W + VR+ MK VG+KK G S +E+ G++H F G S
Sbjct: 559 PENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSH 618
Query: 493 VELAGIYQILETL 505
++ I ++L +
Sbjct: 619 PQIRRINEMLAEM 631
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 147/291 (50%), Gaps = 11/291 (3%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN +I Y ++PR A+ V+ +++ + F P VLKAC ++S G ++ V
Sbjct: 92 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
K GLD DV+ N L+ YG C A VFD M ER VVSW+ +I N A+
Sbjct: 152 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALE 211
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG----TALI 272
+M + P E M+ +++ + N+ +GK +H +I N +G TAL+
Sbjct: 212 LIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSN--NEHMGVPTTTALL 269
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
DMYAKCG +G AR LF+ + + V +W+AMI G + EEA LF + +N + +
Sbjct: 270 DMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDV----M 325
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+ +L A A ++ + F +M G++P ++ ++ + A AG L
Sbjct: 326 IWTAMLSAYAQANCIDQAFNLFDQMR-TSGVRPTKVTIVSLLSLCAVAGAL 375
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 222/438 (50%), Gaps = 27/438 (6%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANV 155
WN +I GYA + +A+ +FI+M K G+ P T V+ AC + +
Sbjct: 367 WNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYA 426
Query: 156 TKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
K G D Y N L+ Y + + +FD M R VSWN +IT V + A+
Sbjct: 427 VKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNAL 486
Query: 216 GYFVKMKDL-----------------GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
+M+ + ++P+ T++ VL C L ++ GK +H I
Sbjct: 487 VLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIR 546
Query: 259 RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALEL 318
+ +G+AL+DMYAKCG + +R +F+ M NV TW+ +I+ HG EEALEL
Sbjct: 547 NMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALEL 606
Query: 319 FSNM-----KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
F NM + PN VTF+ V AC+H+G++ +G F+ M+H HG++P HY +
Sbjct: 607 FKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACV 666
Query: 374 ADILARAGHLKEAYTFIMNMPFQPNPI-VLRALLSASSIHDAKYQDGVGNEVRRRLLELE 432
D+L RAG L+EAY + MP + + + +LL A IH +G + LL LE
Sbjct: 667 VDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQ---NVELGEVAAKNLLHLE 723
Query: 433 PRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQ 492
P + + V+++N Y+ G+W K VR+ M+ +G+KK G SW+E +H+F +G S
Sbjct: 724 PNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSH 783
Query: 493 VELAGIYQILETLNLHMK 510
+ ++ LETL+ M+
Sbjct: 784 PQSEQLHGFLETLSEKMR 801
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 170/370 (45%), Gaps = 39/370 (10%)
Query: 53 VSGLQN---DAQILKELVRFCTLSSSKNLTYARSILCNY---------------VNDSVP 94
VSGLQ+ QI V+F SSS +T A +++ Y + D
Sbjct: 102 VSGLQDLKTGEQIHAAAVKFGYGSSS--VTVANTLVNMYGKCGGIGDVCKVFDRITDRDQ 159
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS---GLNEGMQV 151
+ WN+ I ++ +A+ F M+ ++ + FT V AC+ + GL G Q+
Sbjct: 160 VSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQL 219
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
+ G D +TNN L+ Y R D+ +F+ +R +VSWN +I+ ++
Sbjct: 220 HGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRF 278
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQLGTA 270
EA+ +F M G E D T+ VL AC+ L L +GK +H ++ ++ N +G+A
Sbjct: 279 SEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSA 338
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM-KNSSISP 329
L+DMY C V R +F + + W+AMI G A++G E+AL LF M K + + P
Sbjct: 339 LVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLP 398
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH------GIKPMRIHYHTMADILARAGHL 383
N T V+ AC H F E +H G K R + + D+ +R G +
Sbjct: 399 NTTTMASVMPACVHC-------EAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKM 451
Query: 384 KEAYTFIMNM 393
+ T +M
Sbjct: 452 DISETIFDSM 461
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 125/255 (49%), Gaps = 13/255 (5%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
W + +R S+ REA+ +I+M G +P F +P VLKA + + L G Q+ A
Sbjct: 60 WVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAV 119
Query: 157 KSGL-DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII-TVCVENLWLGEA 214
K G S V N LV YG C D CKVFD + +R VSWN I +C W +A
Sbjct: 120 KFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKW-EQA 178
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELG---NLSLGKWVH---LQLIERGTVLNCQLG 268
+ F M+ E T++ V AC+ LG L LGK +H L++ ++ T N
Sbjct: 179 LEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQKTFTN---- 234
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
AL+ MYAK G V ++ LF + ++ +W+ MI +Q EAL F M +
Sbjct: 235 NALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVE 294
Query: 329 PNYVTFLGVLCACNH 343
+ VT VL AC+H
Sbjct: 295 LDGVTIASVLPACSH 309
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 25/234 (10%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRR-----------------GIKPTEFTYPFVLK 137
+ WN +I GY S R A+ + +M+R KP T VL
Sbjct: 467 VSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLP 526
Query: 138 ACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS 197
CA ++ + +G ++ A ++ L SD+ + LV Y C + +VF++M ++V++
Sbjct: 527 GCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVIT 586
Query: 198 WNVIITVCVENLWLGEAVGYFVKM-----KDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
WNV+I C + EA+ F M + +P+E T + V +AC+ G +S G +
Sbjct: 587 WNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNL 646
Query: 253 HLQLI-ERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM--EEINVWTWSAMI 303
++ + G ++D+ + G + A L + M E V WS+++
Sbjct: 647 FYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLL 700
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 165/490 (33%), Positives = 248/490 (50%), Gaps = 30/490 (6%)
Query: 35 LKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+K C S ++ Q H Q V G Q+D + L+ S+ L AR + D
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALI--VMYSTCGKLEDARKVF-----D 135
Query: 92 SVP----IPWNNLIRGYAWSDRPREAVWVFIDM------KRRGIKPTEFTYPFVLKACAE 141
+P + W ++IRGY + +AV +F D+ + V+ AC+
Sbjct: 136 EIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSR 195
Query: 142 ISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDAC--KVFDDMCERSVVSWN 199
+ + + V K G D V N L+ Y A K+FD + ++ VS+N
Sbjct: 196 VPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYN 255
Query: 200 VIITVCVENLWLGEAVGYF---VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
I++V ++ EA F VK K + F + T+ VL A + G L +GK +H Q+
Sbjct: 256 SIMSVYAQSGMSNEAFEVFRRLVKNKVVTF--NAITLSTVLLAVSHSGALRIGKCIHDQV 313
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
I G + +GT++IDMY KCG V AR F RM+ NV +W+AMI G HG+A +AL
Sbjct: 314 IRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKAL 373
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
ELF M +S + PNY+TF+ VL AC+HAG+ +G+R+F+ M+ G++P HY M D+
Sbjct: 374 ELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDL 433
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGS 436
L RAG L++AY I M +P+ I+ +LL+A IH + RL EL+
Sbjct: 434 LGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVA---RLFELDSSNC 490
Query: 437 QNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELA 496
+++++ YA+ G W+ V VR MKN GL K G S +EL G +H F G + +
Sbjct: 491 GYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQRE 550
Query: 497 GIYQILETLN 506
IY+ L LN
Sbjct: 551 KIYEFLAELN 560
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 165/336 (49%), Gaps = 22/336 (6%)
Query: 69 FCTLS---------SSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFID 119
FC++S +NLT ++ YV+ + WN++I A S EA+ F
Sbjct: 10 FCSVSRLLHTERHTERQNLT---TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSS 66
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M++ + PT ++P +KAC+ + + G Q G SD++ ++ L+ Y +C +
Sbjct: 67 MRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGK 126
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM------KDLGFEPDETTM 233
DA KVFD++ +R +VSW +I N +AV F + D D +
Sbjct: 127 LEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGL 186
Query: 234 LVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC--GAVGCARLLFSRM 291
+ V+SAC+ + L + +H +I+RG +G L+D YAK G V AR +F ++
Sbjct: 187 VSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI 246
Query: 292 EEINVWTWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGMVEDG 350
+ + ++++++ AQ G + EA E+F + KN ++ N +T VL A +H+G + G
Sbjct: 247 VDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIG 306
Query: 351 YRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+ H+ G++ I ++ D+ + G ++ A
Sbjct: 307 -KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETA 341
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/471 (31%), Positives = 236/471 (50%), Gaps = 12/471 (2%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGY-- 104
IHA + G + D + LV T+ + + L + D I WN + G
Sbjct: 437 IHACVWKYGFETDVAVSNALV---TMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHD 493
Query: 105 -AWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD 163
DRP + +F M G P +T+ +L +C+ + ++ G QV A++ K+ LD +
Sbjct: 494 CGMYDRP---LTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDN 550
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
+ L+ Y C DA F+ + R + +W VIIT + +A+ YF +M+
Sbjct: 551 NFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQ 610
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G +P+E T+ LS C+ L +L G+ +H + + G V + +G+AL+DMYAKCG +
Sbjct: 611 EGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEE 670
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A LF + + W+ +I G AQ+G +AL F M + ISP+ VTF G+L AC+H
Sbjct: 671 AEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSH 730
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLR 403
G+VE+G +F+ M GI P H M DIL R G E FI M N ++
Sbjct: 731 QGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWE 790
Query: 404 ALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMK 463
+L AS +H+ +G + +L EL+P + ++++N +A G W+ V VR M
Sbjct: 791 TVLGASKMHNNLV---LGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMS 847
Query: 464 NVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ G+KK G SWVE G +H F S S ++ I+ L+ L+ + + +
Sbjct: 848 SKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQY 898
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 158/321 (49%), Gaps = 6/321 (1%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S L+ C SK+ L IH I + D+ + LV + + YAR +L
Sbjct: 117 SMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVN--VYAKCRYSAYARLVLAKMP 174
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+ V + W LI+G +++++F +M+ GI P EFT LKAC+ L+ G
Sbjct: 175 DRDV-VSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGK 233
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ A K GL D++ + LV Y C A K+F M E++ V+WNV++ +
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRG 293
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+ + F M +L + +E T+ VL C NL G+ +H +I+ G N +G
Sbjct: 294 DVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGC 353
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
L+DMY+KCG A +F +++ ++ WSA+I L Q G +EE+++LF M+ P
Sbjct: 354 GLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLP 413
Query: 330 NYVTFLGVLCACNHAGMVEDG 350
N T +L A + G ++ G
Sbjct: 414 NQYTICSLLSAATNTGNLQYG 434
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 132/297 (44%), Gaps = 3/297 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+HAQ GL D + LV L I ND + WN L+ GYA
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQND---VTWNVLLNGYA 290
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ +F M +K EFT VLK CA L +G + + + K G + + +
Sbjct: 291 QRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEF 350
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
LV Y C DA VF + + +V W+ +IT + E++ F M+
Sbjct: 351 IGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGD 410
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
P++ T+ +LSA T GNL G+ +H + + G + + AL+ MY K G V
Sbjct: 411 TLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGT 470
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
L+ M + ++ +W+A + GL G + L +F +M PN TF+ +L +C+
Sbjct: 471 KLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS 527
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 2/276 (0%)
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
Y +L+ CA L + + K ++ D + +LV Y CR A V M
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
+R VVSW +I V + +++ F +M++ G P+E T+ L AC+ L LGK
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+H Q + G +L+ +G+AL+D+YAKCG + A +F M E N TW+ ++ G AQ G
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
L+LF +M + N T VL C ++ ++ G + H + G +
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQG-QVIHSLIIKCGYEGNEFIGC 353
Query: 372 TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLS 407
+ D+ ++ G +A + +P+ +V AL++
Sbjct: 354 GLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALIT 388
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/480 (31%), Positives = 250/480 (52%), Gaps = 14/480 (2%)
Query: 38 CCSKKHLY-QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSV--P 94
CC+ L Q+H+ SG + + L+ T S + ++ N + + V
Sbjct: 150 CCNHVGLIRQLHSLAFSSGFDSYVSVKNSLL---TYYSKNGILEEAEMVFNGMGEEVRDE 206
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN++I Y R +A+ ++ DM RG + FT VL + + L+ G+Q A
Sbjct: 207 VSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAK 266
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRK-RDACKVFDDMCERSVVSWNVIITVCVENLWLG- 212
K+G + + + + L+ Y C ++ KVF+++C +V WN +I+ +N L
Sbjct: 267 AIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSV 326
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN-CQLGTAL 271
EA+ F +M+ G+ PD+ + + +SAC+ L + S GK H ++ N + AL
Sbjct: 327 EALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNAL 386
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
+ MY+KCG + AR LF RM + N T +++I G AQHG E+L LF M +SI+P
Sbjct: 387 VTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTS 446
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
+T + +L AC H G VE+G +YF+ M+ + GI+P HY M D+L RAG L EA I
Sbjct: 447 ITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLID 506
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQD-GVGNEVRRRLLELEPRGSQNLVIVANKYAEVG 450
MPF P ALL A KY + + + + L+LEP + +++A+ Y+
Sbjct: 507 TMPFSPGSAAWAALLGACR----KYGNMELAEKAANQFLQLEPTNAVPYIMLASMYSAAR 562
Query: 451 MWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
WE+ + +R+ M++ G++K G SW+EL +H F + +S + I+ L+ + + MK
Sbjct: 563 KWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEIHMYLDEMFVKMK 622
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 189/403 (46%), Gaps = 26/403 (6%)
Query: 79 TYARSIL---CNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFT 131
YA+ L +++ D +P P +N LI YA A+ +F +M+ G+ FT
Sbjct: 83 AYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVMDGFT 142
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
+ V+ AC GL Q+ + SG DS V N+L+ +Y +A VF+ M
Sbjct: 143 FSGVITACCNHVGLIR--QLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMG 200
Query: 192 E--RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG 249
E R VSWN +I ++ +A+ + M GFE D T+ VL+ + + +LS G
Sbjct: 201 EEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGG 260
Query: 250 KWVHLQLIERGTVLNCQLGTALIDMYAKCGA-VGCARLLFSRMEEINVWTWSAMILGLAQ 308
H + I+ G N +G+ LIDMYAKCGA + +R +F + ++ W+ MI G +Q
Sbjct: 261 LQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQ 320
Query: 309 HG-YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
+ + EALE F M+ + P+ +F+ + AC++ G + FH + I +
Sbjct: 321 NKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQG-KQFHALAMKSEIPSNQ 379
Query: 368 IHY-HTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNE--- 423
I + + + ++ G+L++A MP Q N + L ++++ + H G+G E
Sbjct: 380 ISVNNALVTMYSKCGNLQDARKLFQRMP-QHNTVTLNSIIAGYAQH------GIGTESLN 432
Query: 424 -VRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
+ L S LV + + A G E+ MK++
Sbjct: 433 LFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDI 475
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 9/225 (4%)
Query: 161 DSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVK 220
+ +V++ N L+ Y A +FD + + +VS+N +I + A+ F +
Sbjct: 71 EPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGE 130
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
M+++G D T V++AC ++ L + +H G + +L+ Y+K G
Sbjct: 131 MREMGLVMDGFTFSGVITACC--NHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGI 188
Query: 281 VGCARLLFSRM-EEI-NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
+ A ++F+ M EE+ + +W++MI+ QH +AL L+ +M + + T VL
Sbjct: 189 LEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVL 248
Query: 339 CACNHAGMVED--GYRYFHEMEHVHGIKPMRIHYHTMADILARAG 381
+ VED G FH G R + D+ A+ G
Sbjct: 249 TTFS---CVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCG 290
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
ALI YAK + A LF ++ + ++ +++ +I A G AL LF M+ +
Sbjct: 79 ALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVM 138
Query: 330 NYVTFLGVLCA-CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+ TF GV+ A CNH G++ R H + G +++ ++ G L+EA
Sbjct: 139 DGFTFSGVITACCNHVGLI----RQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEA 192
>gi|115487662|ref|NP_001066318.1| Os12g0181900 [Oryza sativa Japonica Group]
gi|77553160|gb|ABA95956.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648825|dbj|BAF29337.1| Os12g0181900 [Oryza sativa Japonica Group]
gi|125578708|gb|EAZ19854.1| hypothetical protein OsJ_35439 [Oryza sativa Japonica Group]
Length = 584
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 152/409 (37%), Positives = 221/409 (54%), Gaps = 4/409 (0%)
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
++L R A P EA+ + + + + F + KACA++S L GM V A+
Sbjct: 78 SSLARAAAHRGLPGEAIAFYGRLLAAALPFSSFAFTAAAKACADLSALRTGMAVHAHSVL 137
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
G SD + LV Y C + A K+FD + +RSVV+WN +I+ +N A+
Sbjct: 138 LGFGSDRFVQTALVVLYSKCGQLPVARKLFDAIRDRSVVAWNAMISGYEQNGLAERAIEV 197
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
+ +M+ PD T + LSAC + G L LG+ V +++ ++ LG+AL++MYA+
Sbjct: 198 YREMQVAQVVPDSATFVATLSACAQAGALDLGREVERRIVSDQMDVSVFLGSALVNMYAR 257
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CG V AR F R++E NV TW++MI G HG+ EA++LF M+ +PN VTF+ V
Sbjct: 258 CGLVSKARDWFDRLQERNVVTWTSMIAGYGMHGHGREAIKLFHLMRREGPTPNDVTFVAV 317
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMN-MPFQ 396
L AC HAG+V +G F M+ V+G+ P HY +M D+ RAG L +A FI + +P +
Sbjct: 318 LAACAHAGLVNEGRNAFDSMKRVYGLVPRAEHYCSMVDMYGRAGLLDDAMQFICDSIPEE 377
Query: 397 PNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVS 456
P P V A+L A +H +G EV RL+ LEP + V+++N YA G V
Sbjct: 378 PGPEVWTAMLGACKMHK---NFNLGVEVAERLIALEPENPSHRVLLSNIYALSGKMNHVE 434
Query: 457 NVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
VR M LKK G S +ELGG+ H F G S + IY+ LE L
Sbjct: 435 KVRNVMIKRRLKKQIGYSLIELGGTSHLFRMGEKSHQQTREIYRYLEEL 483
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 165/490 (33%), Positives = 248/490 (50%), Gaps = 30/490 (6%)
Query: 35 LKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+K C S ++ Q H Q V G Q+D + L+ S+ L AR + D
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALI--VMYSTCGKLEDARKVF-----D 135
Query: 92 SVP----IPWNNLIRGYAWSDRPREAVWVFIDM------KRRGIKPTEFTYPFVLKACAE 141
+P + W ++IRGY + +AV +F D+ + V+ AC+
Sbjct: 136 EIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSR 195
Query: 142 ISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDAC--KVFDDMCERSVVSWN 199
+ + + V K G D V N L+ Y A K+FD + ++ VS+N
Sbjct: 196 VPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYN 255
Query: 200 VIITVCVENLWLGEAVGYF---VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
I++V ++ EA F VK K + F + T+ VL A + G L +GK +H Q+
Sbjct: 256 SIMSVYAQSGMSNEAFEVFRRLVKNKVVTF--NAITLSTVLLAVSHSGALRIGKCIHDQV 313
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
I G + +GT++IDMY KCG V AR F RM+ NV +W+AMI G HG+A +AL
Sbjct: 314 IRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKAL 373
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
ELF M +S + PNY+TF+ VL AC+HAG+ +G+R+F+ M+ G++P HY M D+
Sbjct: 374 ELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDL 433
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGS 436
L RAG L++AY I M +P+ I+ +LL+A IH + RL EL+
Sbjct: 434 LGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVA---RLFELDSSNC 490
Query: 437 QNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELA 496
+++++ YA+ G W+ V VR MKN GL K G S +EL G +H F G + +
Sbjct: 491 GYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQRE 550
Query: 497 GIYQILETLN 506
IY+ L LN
Sbjct: 551 KIYEFLAELN 560
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 166/336 (49%), Gaps = 22/336 (6%)
Query: 69 FCTLS---------SSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFID 119
FC++S +NLT ++ YV+ + WN++I A S EA+ F
Sbjct: 10 FCSVSRLLHTERHTERQNLT---TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSS 66
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M++ + PT ++P +KAC+ + + G Q G SD++ ++ L+ Y +C +
Sbjct: 67 MRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGK 126
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM------KDLGFEPDETTM 233
DA KVFD++ +R++VSW +I N +AV F + D D +
Sbjct: 127 LEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGL 186
Query: 234 LVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC--GAVGCARLLFSRM 291
+ V+SAC+ + L + +H +I+RG +G L+D YAK G V AR +F ++
Sbjct: 187 VSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI 246
Query: 292 EEINVWTWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGMVEDG 350
+ + ++++++ AQ G + EA E+F + KN ++ N +T VL A +H+G + G
Sbjct: 247 VDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIG 306
Query: 351 YRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+ H+ G++ I ++ D+ + G ++ A
Sbjct: 307 -KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETA 341
>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Glycine max]
Length = 586
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/420 (34%), Positives = 222/420 (52%), Gaps = 8/420 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
I WN +I GY EA+ +F +M+ +G P +TY LKAC+ EGMQ+ A
Sbjct: 71 ISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAA 130
Query: 155 VTKSGLD--SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
+ + G + LV Y CRR +A KVFD + E+SV+SW+ +I + L
Sbjct: 131 LIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLK 190
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG-TVLNCQLGTAL 271
EA+ F ++++ D + ++ + L GK +H I+ +L + ++
Sbjct: 191 EAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANSV 250
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
+DMY KCG A LF M E NV +W+ MI G +HG +A+ELF+ M+ + I P+
Sbjct: 251 LDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDS 310
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
VT+L VL AC+H+G++++G +YF + IKP HY M D+L R G LKEA I
Sbjct: 311 VTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIE 370
Query: 392 NMPFQPNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVG 450
MP +PN + + LLS +H D + +G +V LL E N V+V+N YA G
Sbjct: 371 KMPLKPNVGIWQTLLSVCRMHGDVE----MGKQVGEILLRREGNNPANYVMVSNMYAHAG 426
Query: 451 MWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
W++ +R +K GLKK G SWVE+ IH FY+G + I+++L+ + +K
Sbjct: 427 YWKESEKIRETLKRKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIHEVLKEMEKRVK 486
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 142/304 (46%), Gaps = 11/304 (3%)
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
+L C++ L++G QV V K G D N+++ Y C +A +VF+ + R+
Sbjct: 10 ILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRN 69
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHL 254
V+SWN +I EA+ F +M++ G PD T L AC+ G +H
Sbjct: 70 VISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHA 129
Query: 255 QLIERG--TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
LI G + + AL+D+Y KC + AR +F R+EE +V +WS +ILG AQ
Sbjct: 130 ALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNL 189
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR-YFHEMEHVHGIKPMRIHYH 371
+EA++LF ++ S + ++ ++E G + + + ++ +G+ M + +
Sbjct: 190 KEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSV-AN 248
Query: 372 TMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLEL 431
++ D+ + G EA M + N + +++ H G+GN+ E+
Sbjct: 249 SVLDMYMKCGLTVEADALFREM-LERNVVSWTVMITGYGKH------GIGNKAVELFNEM 301
Query: 432 EPRG 435
+ G
Sbjct: 302 QENG 305
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 126/272 (46%), Gaps = 6/272 (2%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIHA + G AQ + + AR + + + + + W+ LI GYA
Sbjct: 126 QIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVF-DRIEEKSVMSWSTLILGYA 184
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS--GLDSD 163
D +EA+ +F +++ + F ++ A+ + L +G Q+ A K GL +
Sbjct: 185 QEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGL-LE 243
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
+ N+++ Y C +A +F +M ER+VVSW V+IT ++ +AV F +M++
Sbjct: 244 MSVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQE 303
Query: 224 LGFEPDETTMLVVLSACTELGNLSLG-KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
G EPD T L VLSAC+ G + G K+ + + + ++D+ + G +
Sbjct: 304 NGIEPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLK 363
Query: 283 CARLLFSRME-EINVWTWSAMILGLAQHGYAE 313
A+ L +M + NV W ++ HG E
Sbjct: 364 EAKNLIEKMPLKPNVGIWQTLLSVCRMHGDVE 395
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 138/452 (30%), Positives = 240/452 (53%), Gaps = 8/452 (1%)
Query: 39 CSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWN 98
C+K ++ + +Q +G + + L+ C ++++ AR++ SV WN
Sbjct: 332 CAKA--VEVLSLMQEAGFEPNEVTYSNLLASCI--KARDVHSARAMFDKISRPSVTT-WN 386
Query: 99 NLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS 158
L+ GY ++ ++ + +F M+ + ++P T +L +C+++ L+ G QV + +
Sbjct: 387 TLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRF 446
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
L +D++ + LV Y C + A +F+ M ER VV WN II+ + EA +F
Sbjct: 447 LLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFF 506
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC 278
+M++ G P E++ ++++C+ L ++ G+ +H Q+++ G N +G+ALIDMYAKC
Sbjct: 507 KQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKC 566
Query: 279 GAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVL 338
G + ARL F M N+ W+ MI G AQ+G ++A+ELF M + P+ VTF+ VL
Sbjct: 567 GNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVL 626
Query: 339 CACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
C+H+G+V+ +F+ ME+ +GI P+ HY + D L RAG E I MP + +
Sbjct: 627 TGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDD 686
Query: 399 PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
PI+ LL+A +H + +G L ++P+ V+++N YA +G S V
Sbjct: 687 PIIWEVLLAACVVH---HNAELGKCAAEHLFRIDPKNPSPYVLLSNIYASLGRHGDASAV 743
Query: 459 RRFMKNVGLKKMKGMSWVELGGSIHRFYSGYD 490
R M N G+ K +G SW++ + F D
Sbjct: 744 RALMSNRGVVKGRGYSWIDQKDGVRAFMVADD 775
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 169/378 (44%), Gaps = 22/378 (5%)
Query: 95 IPWNNLIRGYAWS-DRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ WN +I A S EAV ++ M+ G+ PT FT VL AC ++ L +G +
Sbjct: 106 VSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHG 165
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGE 213
K GLD++ + N L+ Y C DA ++F M + VS+ ++ + + +
Sbjct: 166 VAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDD 225
Query: 214 AVGYFVKMKDLGFEPDETTMLVVLSACTE--------LGNLSLGKWVHLQLIERGTVLNC 265
A+ F +M G D ++ VL AC + LG+ +H ++ +G +
Sbjct: 226 ALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQ 285
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
+G +LIDMY KC + A +F + + + +W+ +I G Q G +A+E+ S M+ +
Sbjct: 286 HVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEA 345
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
PN VT+ +L +C A V F ++ +P ++T+ + ++
Sbjct: 346 GFEPNEVTYSNLLASCIKARDVHSARAMFDKIS-----RPSVTTWNTLLSGYCQEEQHQD 400
Query: 386 AYTFIMNMP---FQPNPIVLRALLSASS---IHDAKYQDGVGNEVRRRLLELEPRGSQNL 439
M QP+ L +LS+ S I D Q V + R LL + + L
Sbjct: 401 TIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQ--VHSASVRFLLHNDMFVASGL 458
Query: 440 VIVANKYAEVGMWEKVSN 457
V + +K ++G+ + N
Sbjct: 459 VDMYSKCGQIGIARSIFN 476
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 107/248 (43%), Gaps = 40/248 (16%)
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N L+ Y+ + PR A+ F R P +++Y L A L+
Sbjct: 47 NRLVELYSRAGLPRHALLAF----RALPSPNDYSYNAALSAACRAGDLDAA--------- 93
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG-EAVG 216
RD + M R+ VSWN +I+ + G EAV
Sbjct: 94 -----------------------RD---LLGGMPRRNAVSWNTVISALARSPGDGGEAVE 127
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
+ +M+ G P T+ VLSAC L L G+ H ++ G N + AL+ MY
Sbjct: 128 MYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYT 187
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KCG+VG A LF M N +++AM+ GLAQ G ++AL LF+ M S + + V+
Sbjct: 188 KCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSS 247
Query: 337 VLCACNHA 344
VL AC A
Sbjct: 248 VLGACAQA 255
>gi|225463123|ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 157/490 (32%), Positives = 250/490 (51%), Gaps = 21/490 (4%)
Query: 33 SFLKLCCSKKHLYQIHAQIQVSGLQN--DAQILKELVRFCTLSSSKN-LTYARSILCNYV 89
S ++ C + H+ Q+ A + +G N + L+ C LS S L YA ++
Sbjct: 6 SIIQKCTTLSHIKQVQAHLLTTGQFNLRISPSRTRLLEHCALSPSPAYLPYA-----AHI 60
Query: 90 NDSVPIP----WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL 145
+ +P P +N L+RG A P A+ + + P T+ F L A A L
Sbjct: 61 HRHIPHPSTNDFNALLRGLARGPHPTHALTFLSTI----LHPDALTFSFSLIASARALAL 116
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
+E Q+ +++ + G +D+ L+ Y C A +VFD++ R V +WN +I
Sbjct: 117 SETSQIHSHLLRRGCHADILLGTTLIDAYAKCGDLDSAQRVFDEIPLRDVAAWNALIAGL 176
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
+ EA+ F +M+ G + +E ++L L+AC++LG L G+ VH + + +N
Sbjct: 177 AQGSKSSEALALFNRMRAEGEKINEISVLGALAACSQLGALRAGEGVHACVRKMDLDINV 236
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
Q+ A+IDMYAKCG +FS M +V TW+ MI+ A HG ALELF M
Sbjct: 237 QVCNAVIDMYAKCGFADKGFRVFSTMTCGKSVVTWNTMIMAFAMHGDGCRALELFEEMGK 296
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ + + VT+L VLCACNHAG+VE+G R F EM G+ HY ++ D+L RAG L
Sbjct: 297 TQVEMDSVTYLAVLCACNHAGLVEEGVRLFDEMVG-RGVNRNVKHYGSVVDLLGRAGRLG 355
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
EAY I +MP P+ ++ ++LL A + + R+L+E+ + V+++N
Sbjct: 356 EAYRIINSMPIVPDVVLWQSLLGACKTYG---NVEMAEMASRKLVEMGSNSCGDFVLLSN 412
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILET 504
YA WE V VR MK+ ++K+ G S++E+ G IH+F +G S + IY L+
Sbjct: 413 VYAARERWEDVGRVREAMKSRDVRKVPGFSYIEVEGVIHKFVNGDQSHPDWREIYAKLDE 472
Query: 505 LNLHMKVLNF 514
+ +K +
Sbjct: 473 IRFRIKAFGY 482
>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19191, mitochondrial; Flags: Precursor
gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/424 (34%), Positives = 214/424 (50%), Gaps = 10/424 (2%)
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQ 150
D + WN++ + Y+ +A ++ M R KP T+ + +C L +G
Sbjct: 218 DRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRL 277
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+ ++ G D D+ N + Y A +FD M R+ VSW V+I+ E
Sbjct: 278 IHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGD 337
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL----IERGTVLNCQ 266
+ EA+ F M G +PD T+L ++S C + G+L GKW+ + +R V+ C
Sbjct: 338 MDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICN 397
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
ALIDMY+KCG++ AR +F E V TW+ MI G A +G EAL+LFS M +
Sbjct: 398 ---ALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLD 454
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
PN++TFL VL AC H+G +E G+ YFH M+ V+ I P HY M D+L R G L+EA
Sbjct: 455 YKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEA 514
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKY 446
I NM +P+ + ALL+A IH + + L LEP+ + V +AN Y
Sbjct: 515 LELIRNMSAKPDAGIWGALLNACKIH---RNVKIAEQAAESLFNLEPQMAAPYVEMANIY 571
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLN 506
A GMW+ + +R MK +KK G S +++ G H F G VE IY L L+
Sbjct: 572 AAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLS 631
Query: 507 LHMK 510
L K
Sbjct: 632 LFAK 635
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 133/284 (46%), Gaps = 12/284 (4%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN IR + P E++ +F +MKR G +P FT+PFV KACA ++ + V A++
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
KS SDV+ V + C A KVF+ M ER +WN +++ ++ +A
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F +M+ PD T++ ++ + + +L L + +H I G + + I Y
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYG 199
Query: 277 KCGAVGCARLLFSRME--EINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
KCG + A+L+F ++ + V +W++M + G A +A L+ M P+ TF
Sbjct: 200 KCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTF 259
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILA 378
+ + +C + + G + H H IH T DI A
Sbjct: 260 INLAASCQNPETLTQG-----RLIHSHA-----IHLGTDQDIEA 293
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 137/323 (42%), Gaps = 38/323 (11%)
Query: 61 QILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDM 120
Q ++ + F ++ S T + +L + + + W +I GYA EA+ +F M
Sbjct: 289 QDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAM 348
Query: 121 KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSD-VYTNNNLVRFYGSCRR 179
+ G KP T ++ C + L G + A G D V N L+ Y C
Sbjct: 349 IKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGS 408
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
+A +FD+ E++VV+W +I N EA+ F KM DL ++P+ T L VL A
Sbjct: 409 IHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQA 468
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C G+L G W + ++++ V N G +D Y
Sbjct: 469 CAHSGSLEKG-WEYFHIMKQ--VYNISPG---LDHY------------------------ 498
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
S M+ L + G EEALEL NM S P+ + +L AC V+ + E
Sbjct: 499 SCMVDLLGRKGKLEEALELIRNM---SAKPDAGIWGALLNACKIHRNVKIAEQ---AAES 552
Query: 360 VHGIKP-MRIHYHTMADILARAG 381
+ ++P M Y MA+I A AG
Sbjct: 553 LFNLEPQMAAPYVEMANIYAAAG 575
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 80/145 (55%)
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
SV +WN+ I V E++ F +MK GFEP+ T V AC L ++ + VH
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
LI+ + +GTA +DM+ KC +V A +F RM E + TW+AM+ G Q G+ +
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 314 EALELFSNMKNSSISPNYVTFLGVL 338
+A LF M+ + I+P+ VT + ++
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLI 160
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.137 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,095,803,432
Number of Sequences: 23463169
Number of extensions: 331545052
Number of successful extensions: 817188
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8642
Number of HSP's successfully gapped in prelim test: 2597
Number of HSP's that attempted gapping in prelim test: 689893
Number of HSP's gapped (non-prelim): 50419
length of query: 514
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 367
effective length of database: 8,910,109,524
effective search space: 3270010195308
effective search space used: 3270010195308
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 79 (35.0 bits)