BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046312
(514 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZQA1|PP188_ARATH Pentatricopeptide repeat-containing protein At2g36730
OS=Arabidopsis thaliana GN=PCMP-E44 PE=3 SV=1
Length = 501
Score = 574 bits (1480), Expect = e-163, Method: Compositional matrix adjust.
Identities = 280/485 (57%), Positives = 352/485 (72%), Gaps = 4/485 (0%)
Query: 26 SKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
S+ QCL FLKLC S KHL QIH QI +S LQND+ I+ ELVR +LS +K+L +AR++L
Sbjct: 11 SRKHQCLIFLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLL 70
Query: 86 CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL 145
+ +DS P WN L RGY+ SD P E++WV+ +MKRRGIKP + T+PF+LKACA GL
Sbjct: 71 L-HSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGL 129
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
G Q+Q V K G D DVY NNL+ YG+C++ DA KVFD+M ER+VVSWN I+T
Sbjct: 130 TAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTAL 189
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
VEN L F +M F PDETTM+V+LSAC GNLSLGK VH Q++ R LNC
Sbjct: 190 VENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNC 247
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM-KN 324
+LGTAL+DMYAK G + ARL+F RM + NVWTWSAMI+GLAQ+G+AEEAL+LFS M K
Sbjct: 248 RLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKE 307
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
SS+ PNYVTFLGVLCAC+H G+V+DGY+YFHEME +H IKPM IHY M DIL RAG L
Sbjct: 308 SSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLN 367
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
EAY FI MPF+P+ +V R LLSA SIH + +G+G +V++RL+ELEP+ S NLVIVAN
Sbjct: 368 EAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVAN 427
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILET 504
++AE MW + + VRR MK +KK+ G S +ELGGS HRF+SGYD + E IY++L+
Sbjct: 428 RFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLDL 487
Query: 505 LNLHM 509
+
Sbjct: 488 FKFQL 492
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 311 bits (796), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 173/489 (35%), Positives = 276/489 (56%), Gaps = 9/489 (1%)
Query: 24 LLSKARQCLSFLKL--CCSKKHLYQIHAQIQVSGLQ-NDAQILKELVRF-CTLSSSKNLT 79
LL +C++ L+ S L QIHA G+ +DA++ K L+ + +L S ++
Sbjct: 11 LLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMS 70
Query: 80 YARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRG-IKPTEFTYPFVLKA 138
YA + WN LIRGYA A ++ +M+ G ++P TYPF++KA
Sbjct: 71 YAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKA 130
Query: 139 CAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSW 198
++ + G + + V +SG S +Y N+L+ Y +C A KVFD M E+ +V+W
Sbjct: 131 VTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAW 190
Query: 199 NVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIE 258
N +I EN EA+ + +M G +PD T++ +LSAC ++G L+LGK VH+ +I+
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 259 RGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALEL 318
G N L+D+YA+CG V A+ LF M + N +W+++I+GLA +G+ +EA+EL
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 310
Query: 319 FSNMKNSS-ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL 377
F M+++ + P +TF+G+L AC+H GMV++G+ YF M + I+P H+ M D+L
Sbjct: 311 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 370
Query: 378 ARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
ARAG +K+AY +I +MP QPN ++ R LL A ++H + R ++L+LEP S
Sbjct: 371 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG---DSDLAEFARIQILQLEPNHSG 427
Query: 438 NLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAG 497
+ V+++N YA W V +R+ M G+KK+ G S VE+G +H F G S +
Sbjct: 428 DYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDA 487
Query: 498 IYQILETLN 506
IY L+ +
Sbjct: 488 IYAKLKEMT 496
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 306 bits (784), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 191/523 (36%), Positives = 277/523 (52%), Gaps = 20/523 (3%)
Query: 7 PTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKEL 66
P + HI PP S S + ++ S + C L Q+HA + + L
Sbjct: 28 PLSPHI-PPASSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLY 86
Query: 67 VRFCTLSSS-KNLTYARSILCNYVNDSVPIPWNNLIRGYAWS-DRPREAVWVFIDMKRRG 124
+ LSSS ++ YA + + N S WN LIR A R EA ++ M RG
Sbjct: 87 GKILQLSSSFSDVNYAFRVFDSIENHS-SFMWNTLIRACAHDVSRKEEAFMLYRKMLERG 145
Query: 125 -IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDA 183
P + T+PFVLKACA I G +EG QV + K G DVY NN L+ YGSC A
Sbjct: 146 ESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLA 205
Query: 184 CKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
KVFD+M ERS+VSWN +I V A+ F +M+ FEPD TM VLSAC L
Sbjct: 206 RKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGL 264
Query: 244 GNLSLGKWVHLQLIERGTV---LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
G+LSLG W H L+ + V ++ + +LI+MY KCG++ A +F M++ ++ +W+
Sbjct: 265 GSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWN 324
Query: 301 AMILGLAQHGYAEEALELFSNM--KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
AMILG A HG AEEA+ F M K ++ PN VTF+G+L ACNH G V G +YF M
Sbjct: 325 AMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMV 384
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD 418
+ I+P HY + D++ARAG++ EA +M+MP +P+ ++ R+LL A A +
Sbjct: 385 RDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVE- 443
Query: 419 GVGNEVRRRLLEL-EPRGSQN------LVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMK 471
+ E+ R ++ E S N V+++ YA W V VR+ M G++K
Sbjct: 444 -LSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEP 502
Query: 472 GMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
G S +E+ G H F++G S + IYQ L+ ++ ++ + +
Sbjct: 503 GCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGY 545
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 302 bits (774), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 168/475 (35%), Positives = 267/475 (56%), Gaps = 6/475 (1%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKN-LTYARSILCNYVNDSVPIP 96
C S + L QI A S ++ D + +L+ FCT S +++ ++YAR + + I
Sbjct: 39 CNSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVI- 96
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
+N++ RGY+ P E +F+++ GI P +T+P +LKACA L EG Q+
Sbjct: 97 FNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSM 156
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
K GLD +VY L+ Y C A VFD + E VV +N +IT EA+
Sbjct: 157 KLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALS 216
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
F +M+ +P+E T+L VLS+C LG+L LGKW+H + ++ TALIDM+A
Sbjct: 217 LFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFA 276
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KCG++ A +F +M + WSAMI+ A HG AE+++ +F M++ ++ P+ +TFLG
Sbjct: 277 KCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLG 336
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
+L AC+H G VE+G +YF +M GI P HY +M D+L+RAG+L++AY FI +P
Sbjct: 337 LLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPIS 396
Query: 397 PNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVS 456
P P++ R LL+A S H+ + +V R+ EL+ + VI++N YA WE V
Sbjct: 397 PTPMLWRILLAACSSHN---NLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVD 453
Query: 457 NVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKV 511
++R+ MK+ K+ G S +E+ +H F+SG + +++ L+ + +K+
Sbjct: 454 SLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKL 508
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 300 bits (767), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 184/529 (34%), Positives = 274/529 (51%), Gaps = 58/529 (10%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSS--SKNLTYARSILCNYVNDSVPI 95
C + + L QIHA SG D E++RFC S ++L YA I N +
Sbjct: 33 CRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIF-NQMPQRNCF 91
Query: 96 PWNNLIRGYAWSDRPRE--AVWVFIDM-KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQ 152
WN +IRG++ SD + A+ +F +M ++P FT+P VLKACA+ + EG Q+
Sbjct: 92 SWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIH 151
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSC------------------------RRKRDA----- 183
K G D + +NLVR Y C RRKRD
Sbjct: 152 GLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLW 211
Query: 184 ------------CK----VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
CK +FD M +RSVVSWN +I+ N + +AV F +MK
Sbjct: 212 NVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIR 271
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
P+ T++ VL A + LG+L LG+W+HL + G ++ LG+ALIDMY+KCG + A +
Sbjct: 272 PNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHV 331
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMV 347
F R+ NV TWSAMI G A HG A +A++ F M+ + + P+ V ++ +L AC+H G+V
Sbjct: 332 FERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLV 391
Query: 348 EDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLS 407
E+G RYF +M V G++P HY M D+L R+G L EA FI+NMP +P+ ++ +ALL
Sbjct: 392 EEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLG 451
Query: 408 ASSIHDAKYQDGV--GNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
A + Q V G V L+++ P S V ++N YA G W +VS +R MK
Sbjct: 452 A-----CRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEK 506
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
++K G S +++ G +H F DS + I +L ++ +++ +
Sbjct: 507 DIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGY 555
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 298 bits (762), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 173/472 (36%), Positives = 260/472 (55%), Gaps = 18/472 (3%)
Query: 42 KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP----W 97
K L Q+HA + V+G +L +L+ S++ + Y + SVP+P +
Sbjct: 23 KQLQQVHAHLIVTGYGRSRSLLTKLITLAC--SARAIAYTHLLFL-----SVPLPDDFLF 75
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N++I+ + P V + M + P+ +T+ V+K+CA++S L G V +
Sbjct: 76 NSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVV 135
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
SG D Y LV FY C A +VFD M E+S+V+WN +++ +N EA+
Sbjct: 136 SGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQV 195
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
F +M++ GFEPD T + +LSAC + G +SLG WVH +I G LN +LGTALI++Y++
Sbjct: 196 FYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSR 255
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS-SISPNYVTFLG 336
CG VG AR +F +M+E NV W+AMI HGY ++A+ELF+ M++ PN VTF+
Sbjct: 256 CGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVA 315
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQ 396
VL AC HAG+VE+G + M + + P H+ M D+L RAG L EAY FI +
Sbjct: 316 VLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDAT 375
Query: 397 PN---PIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWE 453
P + A+L A +H Y GV E+ +RL+ LEP + V+++N YA G +
Sbjct: 376 GKATAPALWTAMLGACKMHR-NYDLGV--EIAKRLIALEPDNPGHHVMLSNIYALSGKTD 432
Query: 454 KVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
+VS++R M L+K G S +E+ + F G +S E IY+ LETL
Sbjct: 433 EVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETL 484
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 296 bits (759), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 171/465 (36%), Positives = 245/465 (52%), Gaps = 6/465 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
+IH SG + I LV S L AR + + +V + WN++I Y
Sbjct: 257 EIHGYAMRSGFDSLVNISTALVDMYAKCGS--LETARQLFDGMLERNV-VSWNSMIDAYV 313
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
++ P+EA+ +F M G+KPT+ + L ACA++ L G + + GLD +V
Sbjct: 314 QNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVS 373
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N+L+ Y C+ A +F + R++VSWN +I +N +A+ YF +M+
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT 433
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+PD T + V++A EL KW+H ++ N + TAL+DMYAKCGA+ AR
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR 493
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
L+F M E +V TW+AMI G HG+ + ALELF M+ +I PN VTFL V+ AC+H+G
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSG 553
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRAL 405
+VE G + F+ M+ + I+ HY M D+L RAG L EA+ FIM MP +P V A+
Sbjct: 554 LVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAM 613
Query: 406 LSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNV 465
L A IH + RL EL P V++AN Y MWEKV VR M
Sbjct: 614 LGACQIHK---NVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQ 670
Query: 466 GLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
GL+K G S VE+ +H F+SG + + IY LE L H+K
Sbjct: 671 GLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIK 715
Score = 159 bits (401), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 167/337 (49%), Gaps = 21/337 (6%)
Query: 34 FLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
LK+C + L +IH + SG D + L + + + AR +
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM--YAKCRQVNEARKVF----- 193
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P + WN ++ GY+ + R A+ + M +KP+ T VL A + + ++
Sbjct: 194 DRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLIS 253
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G ++ +SG DS V + LV Y C A ++FD M ER+VVSWN +I V
Sbjct: 254 VGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYV 313
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+N EA+ F KM D G +P + +++ L AC +LG+L G+++H +E G N
Sbjct: 314 QNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVS 373
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+ +LI MY KC V A +F +++ + +W+AMILG AQ+G +AL FS M++ +
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT 433
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
+ P+ T++ V+ A + H + +HG+
Sbjct: 434 VKPDTFTYVSVITAIAELSIT-------HHAKWIHGV 463
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 166/325 (51%), Gaps = 6/325 (1%)
Query: 34 FLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILCNYVNDS 92
L+ C S K L QI + +GL + +LV FC S AR + ++
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEA--AR--VFEPIDSK 98
Query: 93 VPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQ 152
+ + ++ +++G+A +A+ F+ M+ ++P + + ++LK C + + L G ++
Sbjct: 99 LNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 158
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
+ KSG D++ L Y CR+ +A KVFD M ER +VSWN I+ +N
Sbjct: 159 GLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMAR 218
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
A+ M + +P T++ VL A + L +S+GK +H + G + TAL+
Sbjct: 219 MALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALV 278
Query: 273 DMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYV 332
DMYAKCG++ AR LF M E NV +W++MI Q+ +EA+ +F M + + P V
Sbjct: 279 DMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 338
Query: 333 TFLGVLCACNHAGMVEDGYRYFHEM 357
+ +G L AC G +E G R+ H++
Sbjct: 339 SVMGALHACADLGDLERG-RFIHKL 362
>sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protein At1g50270
OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1
Length = 596
Score = 291 bits (744), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 180/513 (35%), Positives = 271/513 (52%), Gaps = 24/513 (4%)
Query: 1 MVRFPVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDA 60
M R V + H FPP L KA KL S +Q HA I GL +D
Sbjct: 95 MRRNGVIPSRHTFPP---------LLKA-----VFKLRDSNP--FQFHAHIVKFGLDSDP 138
Query: 61 QILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDM 120
+ L+ SSS +A S L + D + W +I G+ + EA+ F++M
Sbjct: 139 FVRNSLI--SGYSSSGLFDFA-SRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEM 195
Query: 121 KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG-LDSDVYTNNNLVRFYGSCRR 179
K+ G+ E T VLKA ++ + G V ++G + DV+ ++LV YG C
Sbjct: 196 KKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSC 255
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSA 239
DA KVFD+M R+VV+W +I V++ + + F +M P+E T+ VLSA
Sbjct: 256 YDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSA 315
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C +G L G+ VH +I+ +N GT LID+Y KCG + A L+F R+ E NV+TW
Sbjct: 316 CAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTW 375
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+AMI G A HGYA +A +LF M +S +SPN VTF+ VL AC H G+VE+G R F M+
Sbjct: 376 TAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKG 435
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
++P HY M D+ R G L+EA I MP +P +V AL + +H Y+
Sbjct: 436 RFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLH-KDYE-- 492
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
+G R+++L+P S ++AN Y+E W++V+ VR+ MK+ + K G SW+E+
Sbjct: 493 LGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVK 552
Query: 480 GSIHRFYSGYDSQ-VELAGIYQILETLNLHMKV 511
G + F + D + +E +Y+ L+T+ + M++
Sbjct: 553 GKLCEFIAFDDKKPLESDDLYKTLDTVGVQMRL 585
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/445 (28%), Positives = 208/445 (46%), Gaps = 53/445 (11%)
Query: 43 HLYQIHAQIQVSGL---QNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNN 99
HL QIH + S + + D + + L R CT ++ YAR +LC S+ + W++
Sbjct: 16 HLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCT--AATQFRYARRLLCQLQTLSIQL-WDS 72
Query: 100 LIRGYAW--SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
LI ++ + R + + M+R G+ P+ T+P +LKA ++ N Q A++ K
Sbjct: 73 LIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNP-FQFHAHIVK 131
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
GLDSD + N+L+ Y S A ++FD ++ VV+W +I V N EA+ Y
Sbjct: 132 FGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVY 191
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNCQLGTALIDMYA 276
FV+MK G +E T++ VL A ++ ++ G+ VH +E G V + +G++L+DMY
Sbjct: 192 FVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYG 251
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLG 336
KC A+ +F M NV TW+A+I G Q ++ + +F M S ++PN T
Sbjct: 252 KCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSS 311
Query: 337 VLCACNHAGMVEDGYRYFH--------EMEHVHGIKPM-----------------RIH-- 369
VL AC H G + G R H E+ G + R+H
Sbjct: 312 VLSACAHVGALHRG-RRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEK 370
Query: 370 ----YHTMADILARAGHLKEAYTFIMNM---PFQPNPIVLRALLSASSIHDAKYQDGVGN 422
+ M + A G+ ++A+ M PN + A+LSA + G+
Sbjct: 371 NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA------HGGLVE 424
Query: 423 EVRRRLLELEPRGSQNLVIVANKYA 447
E RR L + +G N+ A+ YA
Sbjct: 425 EGRRLFLSM--KGRFNMEPKADHYA 447
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 286 bits (731), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 165/511 (32%), Positives = 259/511 (50%), Gaps = 34/511 (6%)
Query: 19 NCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNL 78
+C+ L + +S L+ C ++ L QIHA++ +GL D+ + + + FC S+S +
Sbjct: 5 SCSFSLEHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDF 64
Query: 79 TYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKA 138
I+ + + WN +IRG++ SD P ++ ++ M +T+P +LKA
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKA 124
Query: 139 CAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD---------- 188
C+ +S E Q+ A +TK G ++DVY N+L+ Y + A +FD
Sbjct: 125 CSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSW 184
Query: 189 ---------------------DMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
M E++ +SW +I+ V+ EA+ F +M++ E
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
PD ++ LSAC +LG L GKW+H L + ++ LG LIDMYAKCG + A +
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEV 304
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMV 347
F +++ +V W+A+I G A HG+ EA+ F M+ I PN +TF VL AC++ G+V
Sbjct: 305 FKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLV 364
Query: 348 EDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLS 407
E+G F+ ME + +KP HY + D+L RAG L EA FI MP +PN ++ ALL
Sbjct: 365 EEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLK 424
Query: 408 ASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGL 467
A IH +G E+ L+ ++P V AN +A W+K + RR MK G+
Sbjct: 425 ACRIHK---NIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGV 481
Query: 468 KKMKGMSWVELGGSIHRFYSGYDSQVELAGI 498
K+ G S + L G+ H F +G S E+ I
Sbjct: 482 AKVPGCSTISLEGTTHEFLAGDRSHPEIEKI 512
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 283 bits (724), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 170/482 (35%), Positives = 262/482 (54%), Gaps = 10/482 (2%)
Query: 28 ARQCLS-FLKLCCSK-KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
+Q LS L+ SK K L +IHA + +G +L +L+ L ++ YAR +
Sbjct: 9 TKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLE--NLVVIGDMCYARQVF 66
Query: 86 CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL 145
+ ++ WN L +GY + P E++ ++ M+ G++P EFTYPFV+KA +++
Sbjct: 67 -DEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDF 125
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
+ G + A+V K G LV Y A +F+ M + +V+WN + VC
Sbjct: 126 SCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVC 185
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
V+ A+ YF KM + D T++ +LSAC +LG+L +G+ ++ + + N
Sbjct: 186 VQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNI 245
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
+ A +DM+ KCG AR+LF M++ NV +WS MI+G A +G + EAL LF+ M+N
Sbjct: 246 IVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNE 305
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEM--EHVHGIKPMRIHYHTMADILARAGHL 383
+ PNYVTFLGVL AC+HAG+V +G RYF M + ++P + HY M D+L R+G L
Sbjct: 306 GLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLL 365
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
+EAY FI MP +P+ + ALL A ++H +G +V L+E P V+++
Sbjct: 366 EEAYEFIKKMPVEPDTGIWGALLGACAVHRDMI---LGQKVADVLVETAPDIGSYHVLLS 422
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N YA G W+ V VR M+ +G KK+ S VE G IH F G S + IY+ L+
Sbjct: 423 NIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLD 482
Query: 504 TL 505
+
Sbjct: 483 EI 484
>sp|P0C8Q7|PP369_ARATH Pentatricopeptide repeat-containing protein At5g08305
OS=Arabidopsis thaliana GN=PCMP-E105 PE=2 SV=1
Length = 534
Score = 281 bits (720), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 170/501 (33%), Positives = 271/501 (54%), Gaps = 41/501 (8%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW 97
C S LY+IH + GL + + + + F LSSS ++ YA L ++D W
Sbjct: 18 CKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSK-LSDPPNYGW 76
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N +IRG++ S P +++ V+I M R G+ P TYPF++K+ + +S G + +V K
Sbjct: 77 NFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVK 136
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACK-------------------------------V 186
SGL+ D++ N L+ YGS R + A K V
Sbjct: 137 SGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLV 196
Query: 187 FDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF-EPDETTMLVVLSACTELGN 245
FD+M ER VV+W+ +I V+ +A+ F +M +G + +E TM+ V+ AC LG
Sbjct: 197 FDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGA 256
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSR--MEEINVWTWSAMI 303
L+ GK VH +++ L L T+LIDMYAKCG++G A +F R ++E + W+A+I
Sbjct: 257 LNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAII 316
Query: 304 LGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
GLA HG+ E+L+LF M+ S I P+ +TFL +L AC+H G+V++ + +F ++ G
Sbjct: 317 GGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKE-SGA 375
Query: 364 KPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH-DAKYQDGVGN 422
+P HY M D+L+RAG +K+A+ FI MP +P +L ALL+ H + + + VG
Sbjct: 376 EPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVG- 434
Query: 423 EVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSI 482
++L+EL+P V +AN YA + ++R M+ G+KK+ G S ++L G+
Sbjct: 435 ---KKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTR 491
Query: 483 HRFYSGYDSQVELAGIYQILE 503
HRF + + IY +L+
Sbjct: 492 HRFIAHDKTHFHSDKIYAVLQ 512
>sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protein At2g20540
OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1
Length = 534
Score = 281 bits (718), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 168/509 (33%), Positives = 267/509 (52%), Gaps = 38/509 (7%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+ FL+ S+ +I+A I + GL + ++ ++V FC +++ YA + N
Sbjct: 14 IPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFC--DKIEDMDYATRLFNQVSNP 71
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIK-PTEFTYPFVLKACAEISGLNEGMQ 150
+V + +N++IR Y + + + ++ + R+ + P FT+PF+ K+CA + G Q
Sbjct: 72 NVFL-YNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQ 130
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT------- 203
V ++ K G V T N L+ Y DA KVFD+M ER V+SWN +++
Sbjct: 131 VHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQ 190
Query: 204 -------------------VCVENLWLG-----EAVGYFVKMKDLGFEPDETTMLVVLSA 239
+ + + G EA+ +F +M+ G EPDE +++ VL +
Sbjct: 191 MKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPS 250
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C +LG+L LGKW+HL RG + + ALI+MY+KCG + A LF +ME +V +W
Sbjct: 251 CAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISW 310
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
S MI G A HG A A+E F+ M+ + + PN +TFLG+L AC+H GM ++G RYF M
Sbjct: 311 STMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQ 370
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
+ I+P HY + D+LARAG L+ A MP +P+ + +LLS+
Sbjct: 371 DYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCR---TPGNLD 427
Query: 420 VGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
V L+ELEP N V++AN YA++G WE VS +R+ ++N +KK G S +E+
Sbjct: 428 VALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVN 487
Query: 480 GSIHRFYSGYDSQVELAGIYQILETLNLH 508
+ F SG +S+ I +L+ H
Sbjct: 488 NIVQEFVSGDNSKPFWTEISIVLQLFTSH 516
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 278 bits (711), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 171/503 (33%), Positives = 251/503 (49%), Gaps = 44/503 (8%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+H+ I S +D I LV S N+ A+ + + + D + WN+LI +
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDM--YSKCGNVNDAQRVF-DEMGDRNVVSWNSLITCFE 229
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG-LDSDV 164
+ EA+ VF M ++P E T V+ ACA +S + G +V V K+ L +D+
Sbjct: 230 QNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDI 289
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDM-------------------------------CER 193
+N V Y C R ++A +FD M ER
Sbjct: 290 ILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAER 349
Query: 194 SVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
+VVSWN +I +N EA+ F +K P + +L AC +L L LG H
Sbjct: 350 NVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAH 409
Query: 254 LQLIERGTVLNCQ------LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA 307
+ +++ G +G +LIDMY KCG V L+F +M E + +W+AMI+G A
Sbjct: 410 VHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFA 469
Query: 308 QHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
Q+GY EALELF M S P+++T +GVL AC HAG VE+G YF M G+ P+R
Sbjct: 470 QNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLR 529
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRR 427
HY M D+L RAG L+EA + I MP QP+ ++ +LL+A +H +G V +
Sbjct: 530 DHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH---RNITLGKYVAEK 586
Query: 428 LLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYS 487
LLE+EP S V+++N YAE+G WE V NVR+ M+ G+ K G SW+++ G H F
Sbjct: 587 LLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMV 646
Query: 488 GYDSQVELAGIYQILETLNLHMK 510
S I+ +L+ L M+
Sbjct: 647 KDKSHPRKKQIHSLLDILIAEMR 669
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 185/378 (48%), Gaps = 44/378 (11%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN+++ G+A DR EA+ F M + G E+++ VL AC+ ++ +N+G+QV + +
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
KS SDVY + LV Y C DA +VFD+M +R+VVSWN +IT +N EA+
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN-CQLGTALIDMY 275
F M + EPDE T+ V+SAC L + +G+ VH ++++ + N L A +DMY
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 276 AKC-------------------------------GAVGCARLLFSRMEEINVWTWSAMIL 304
AKC + ARL+F++M E NV +W+A+I
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 305 GLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN-----HAGMVEDGYRYFHEMEH 359
G Q+G EEAL LF +K S+ P + +F +L AC H GM + H +
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 419
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG 419
G + +++ D+ + G ++E Y M + R +S +++ Q+G
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-------MERDCVSWNAMIIGFAQNG 472
Query: 420 VGNEVRRRLLELEPRGSQ 437
GNE E+ G +
Sbjct: 473 YGNEALELFREMLESGEK 490
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 138/289 (47%), Gaps = 32/289 (11%)
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT------- 203
V A+V KSG ++++ N L+ Y C D +VFD M +R++ +WN ++T
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 204 ---------------VCVENLWLG---------EAVGYFVKMKDLGFEPDETTMLVVLSA 239
C N + EA+ YF M GF +E + VLSA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 240 CTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTW 299
C+ L +++ G VH + + + + +G+AL+DMY+KCG V A+ +F M + NV +W
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEH 359
+++I Q+G A EAL++F M S + P+ VT V+ AC ++ G +
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 360 VHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
++ I + D+ A+ +KEA +MP + N I +++S
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR-NVIAETSMISG 329
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 110/236 (46%), Gaps = 27/236 (11%)
Query: 214 AVGYFVKMK-DLGFEPDETTMLVVLSAC--TELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
A F+K+ DL D + +L +C ++L + + ++VH +I+ G +
Sbjct: 2 ATKSFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNR 60
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
LID Y+KCG++ R +F +M + N++TW++++ GL + G+ +EA LF +M +
Sbjct: 61 LIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPER----D 116
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE----- 385
T+ ++ E+ YF M H G ++ ++ A +L+ L +
Sbjct: 117 QCTWNSMVSGFAQHDRCEEALCYF-AMMHKEGFV---LNEYSFASVLSACSGLNDMNKGV 172
Query: 386 -AYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLV 440
++ I PF + + AL+ D + G N+ +R E+ G +N+V
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALV------DMYSKCGNVNDAQRVFDEM---GDRNVV 219
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 277 bits (709), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/437 (34%), Positives = 233/437 (53%), Gaps = 23/437 (5%)
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
+ WN +I + + + E +++F+ M R I+P EFT+ +LKAC S L GM++ +
Sbjct: 448 AVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGS-LGYGMEIHS 506
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS------------------- 194
++ KSG+ S+ +L+ Y C +A K+ +R+
Sbjct: 507 SIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQE 566
Query: 195 -VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVH 253
VSWN II+ V +A F +M ++G PD+ T VL C L + LGK +H
Sbjct: 567 MCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIH 626
Query: 254 LQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAE 313
Q+I++ + + + L+DMY+KCG + +RL+F + + TW+AMI G A HG E
Sbjct: 627 AQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGE 686
Query: 314 EALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTM 373
EA++LF M +I PN+VTF+ +L AC H G+++ G YF+ M+ +G+ P HY M
Sbjct: 687 EAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNM 746
Query: 374 ADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEP 433
DIL ++G +K A I MPF+ + ++ R LL +IH + V E LL L+P
Sbjct: 747 VDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVE--VAEEATAALLRLDP 804
Query: 434 RGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQV 493
+ S +++N YA+ GMWEKVS++RR M+ LKK G SWVEL +H F G +
Sbjct: 805 QDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHP 864
Query: 494 ELAGIYQILETLNLHMK 510
IY+ L + MK
Sbjct: 865 RWEEIYEELGLIYSEMK 881
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 140/260 (53%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN+++ GY + +++ VF+DM R GI+ T+ +LK C+ + + GMQ+
Sbjct: 146 VSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGI 205
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V + G D+DV + L+ Y +R ++ +VF + E++ VSW+ II CV+N L A
Sbjct: 206 VVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLA 265
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ +F +M+ + ++ VL +C L L LG +H ++ + + TA +DM
Sbjct: 266 LKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDM 325
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKC + A++LF E +N +++AMI G +Q + +AL LF + +S + + ++
Sbjct: 326 YAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISL 385
Query: 335 LGVLCACNHAGMVEDGYRYF 354
GV AC + +G + +
Sbjct: 386 SGVFRACALVKGLSEGLQIY 405
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 157/335 (46%), Gaps = 33/335 (9%)
Query: 33 SFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTL---SSSKNLTYARSILC 86
S L+ C + L Q+HA S D +VR TL + N+ A+ +
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADG-----IVRTATLDMYAKCDNMQDAQILFD 340
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
N N + +N +I GY+ + +A+ +F + G+ E + V +ACA + GL+
Sbjct: 341 NSENLNRQ-SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLS 399
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
EG+Q+ KS L DV N + YG C+ +A +VFD+M R VSWN II
Sbjct: 400 EGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHE 459
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+N E + FV M EPDE T +L ACT G+L G +H +++ G N
Sbjct: 460 QNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSS 518
Query: 267 LGTALIDMYAKCGAVGCARLLFSR----------MEEINVW----------TWSAMILGL 306
+G +LIDMY+KCG + A + SR MEE+ +W+++I G
Sbjct: 519 VGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGY 578
Query: 307 AQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
+E+A LF+ M I+P+ T+ VL C
Sbjct: 579 VMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTC 613
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 103/241 (42%), Gaps = 31/241 (12%)
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
+ FV K CA+ L G Q A++ SG + N L++ Y + R A VFD M
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 192 ERSVVSWNVIIT-----------------VCVENL--WLGEAVGY------------FVK 220
R VVSWN +I + V ++ W GY FV
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
M G E D T ++L C+ L + SLG +H ++ G + +AL+DMYAK
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 230
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
+ +F + E N +WSA+I G Q+ AL+ F M+ + + + VL +
Sbjct: 231 FVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRS 290
Query: 341 C 341
C
Sbjct: 291 C 291
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILCNYVNDSVPIPWNNLIR 102
QIHAQ+ LQ+D I LV C L + +S+ ++V WN +I
Sbjct: 624 QIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVT------WNAMIC 677
Query: 103 GYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKS-GLD 161
GYA + EA+ +F M IKP T+ +L+ACA + +++G++ + + GLD
Sbjct: 678 GYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLD 737
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITVCV 206
+ +N+V G + + A ++ +M E V W ++ VC
Sbjct: 738 PQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCT 783
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 32/181 (17%)
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
RSVVS+N +T + + + YF + T V C + G L LGK
Sbjct: 12 RSVVSFNRCLTEKISYRRV-PSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQA 70
Query: 253 HLQLIERGT-----VLNCQLGT--------------------------ALIDMYAKCGAV 281
H +I G VLNC L +I+ Y+K +
Sbjct: 71 HAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDM 130
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
A F+ M +V +W++M+ G Q+G + +++E+F +M I + TF +L C
Sbjct: 131 FKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVC 190
Query: 342 N 342
+
Sbjct: 191 S 191
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 275 bits (703), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 252/485 (51%), Gaps = 13/485 (2%)
Query: 35 LKLCC---SKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LK C S+K +H+ + G +D + L+ + S N + L + + D
Sbjct: 118 LKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHK---LFDEIPD 174
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQV 151
+ W L GY S R REA+ +F M G+KP + VL AC + L+ G +
Sbjct: 175 RSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWI 234
Query: 152 QANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
+ + + + + LV Y C + A VFD M E+ +V+W+ +I N +
Sbjct: 235 VKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFP 294
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL-NCQLGTA 270
E + F++M +PD+ +++ LS+C LG L LG+W + LI+R L N + A
Sbjct: 295 KEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEW-GISLIDRHEFLTNLFMANA 353
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
LIDMYAKCGA+ +F M+E ++ +A I GLA++G+ + + +F + ISP+
Sbjct: 354 LIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPD 413
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
TFLG+LC C HAG+++DG R+F+ + V+ +K HY M D+ RAG L +AY I
Sbjct: 414 GSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLI 473
Query: 391 MNMPFQPNPIVLRALLSASS-IHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
+MP +PN IV ALLS + D + + V + L+ LEP + N V ++N Y+
Sbjct: 474 CDMPMRPNAIVWGALLSGCRLVKDTQ----LAETVLKELIALEPWNAGNYVQLSNIYSVG 529
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
G W++ + VR M G+KK+ G SW+EL G +H F + S IY LE L M
Sbjct: 530 GRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEM 589
Query: 510 KVLNF 514
+++ F
Sbjct: 590 RLMGF 594
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 191/383 (49%), Gaps = 5/383 (1%)
Query: 26 SKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
SK +Q + + + C+ HL QIH + L +D ++ L++ +Y +L
Sbjct: 11 SKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSY---LL 67
Query: 86 CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL 145
++ +N+LI G+ + E + +F+ +++ G+ FT+P VLKAC S
Sbjct: 68 FSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSR 127
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
G+ + + V K G + DV +L+ Y R DA K+FD++ +RSVV+W + +
Sbjct: 128 KLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGY 187
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
+ EA+ F KM ++G +PD ++ VLSAC +G+L G+W+ + E N
Sbjct: 188 TTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNS 247
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
+ T L+++YAKCG + AR +F M E ++ TWS MI G A + + +E +ELF M
Sbjct: 248 FVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQE 307
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
++ P+ + +G L +C G ++ G ++ H + + D+ A+ G +
Sbjct: 308 NLKPDQFSIVGFLSSCASLGALDLGEWGISLIDR-HEFLTNLFMANALIDMYAKCGAMAR 366
Query: 386 AYTFIMNMPFQPNPIVLRALLSA 408
+ M + + +++ A +S
Sbjct: 367 GFEVFKEMK-EKDIVIMNAAISG 388
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 275 bits (702), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 152/449 (33%), Positives = 245/449 (54%), Gaps = 12/449 (2%)
Query: 68 RFCTL-----SSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKR 122
RFC S +L A+++ ++D + + ++I GYA EAV +F +M+
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVF-REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 123 RGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRD 182
GI P +T VL CA L+EG +V + ++ L D++ +N L+ Y C ++
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 450
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF-VKMKDLGFEPDETTMLVVLSACT 241
A VF +M + ++SWN II +N + EA+ F + +++ F PDE T+ VL AC
Sbjct: 451 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 510
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
L G+ +H ++ G + + +L+DMYAKCGA+ A +LF + ++ +W+
Sbjct: 511 SLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTV 570
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
MI G HG+ +EA+ LF+ M+ + I + ++F+ +L AC+H+G+V++G+R+F+ M H
Sbjct: 571 MIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHEC 630
Query: 362 GIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSI-HDAKYQDGV 420
I+P HY + D+LAR G L +AY FI NMP P+ + ALL I HD K + V
Sbjct: 631 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKV 690
Query: 421 GNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGG 480
+V ELEP + V++AN YAE WE+V +R+ + GL+K G SW+E+ G
Sbjct: 691 AEKV----FELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKG 746
Query: 481 SIHRFYSGYDSQVELAGIYQILETLNLHM 509
++ F +G S E I L + M
Sbjct: 747 RVNIFVAGDSSNPETENIEAFLRKVRARM 775
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 177/361 (49%), Gaps = 7/361 (1%)
Query: 29 RQCLSFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
R S L+LC K L ++ I+ +G D+ + +L T + +L A +
Sbjct: 95 RTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYT--NCGDLKEASRVF 152
Query: 86 CNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGL 145
+ V + WN L+ A S ++ +F M G++ +T+ V K+ + + +
Sbjct: 153 -DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 146 NEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVC 205
+ G Q+ + KSG N+LV FY +R A KVFD+M ER V+SWN II
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 206 VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNC 265
V N + + FV+M G E D T++ V + C + +SLG+ VH ++
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 331
Query: 266 QLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNS 325
+ L+DMY+KCG + A+ +F M + +V ++++MI G A+ G A EA++LF M+
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
Query: 326 SISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKE 385
ISP+ T VL C ++++G R HE + + + + D+ A+ G ++E
Sbjct: 392 GISPDVYTVTAVLNCCARYRLLDEGKR-VHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 450
Query: 386 A 386
A
Sbjct: 451 A 451
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 157/339 (46%), Gaps = 5/339 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
Q+H I SG + LV F ++ + AR + V I WN++I GY
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAF--YLKNQRVDSARKVFDEMTERDV-ISWNSIINGYV 272
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ + + VF+ M GI+ T V CA+ ++ G V + K+ +
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N L+ Y C A VF +M +RSVVS+ +I GEAV F +M++ G
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
PD T+ VL+ C L GK VH + E + + AL+DMYAKCG++ A
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFS-NMKNSSISPNYVTFLGVLCACNHA 344
L+FS M ++ +W+ +I G +++ YA EAL LF+ ++ SP+ T VL AC
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+ G R H +G R +++ D+ A+ G L
Sbjct: 513 SAFDKG-REIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 148/338 (43%), Gaps = 10/338 (2%)
Query: 98 NNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTK 157
N +R + S AV + + I P T VL+ CA+ L +G +V +
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 158 SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGY 217
+G D + L Y +C ++A +VFD++ + WN+++ ++ ++G
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 218 FVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
F KM G E D T V + + L ++ G+ +H +++ G +G +L+ Y K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
V AR +F M E +V +W+++I G +G AE+ L +F M S I + T + V
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 338 LCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQP 397
C + ++ G R H + +T+ D+ ++ G L A M
Sbjct: 303 FAGCADSRLISLG-RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD-- 359
Query: 398 NPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
R+++S +S+ ++G+ E + E+E G
Sbjct: 360 -----RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
>sp|Q9FMA1|PP433_ARATH Pentatricopeptide repeat-containing protein At5g56310
OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1
Length = 530
Score = 275 bits (702), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 170/507 (33%), Positives = 265/507 (52%), Gaps = 46/507 (9%)
Query: 42 KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW--NN 99
K L Q H + ++GL D + + + C S++ +L YA S+ + + P + N
Sbjct: 29 KTLKQSHCYMIITGLNRDNLNVAKFIEAC--SNAGHLRYAYSV---FTHQPCPNTYLHNT 83
Query: 100 LIRGYAWSDRPRE---AVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
+IR + D P A+ V+ + KP FT+PFVLK +S + G Q+ V
Sbjct: 84 MIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVV 143
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSV--------------------- 195
G DS V+ L++ Y SC DA K+FD+M + V
Sbjct: 144 VFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARS 203
Query: 196 ------------VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
VSW +I+ ++ EA+ F +M EPDE T+L VLSAC +L
Sbjct: 204 LLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADL 263
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
G+L LG+ + + RG L A+IDMYAK G + A +F + E NV TW+ +I
Sbjct: 264 GSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTII 323
Query: 304 LGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
GLA HG+ EAL +F+ M + + PN VTF+ +L AC+H G V+ G R F+ M +GI
Sbjct: 324 AGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGI 383
Query: 364 KPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNE 423
P HY M D+L RAG L+EA I +MPF+ N + +LL+AS++H + +G
Sbjct: 384 HPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVH---HDLELGER 440
Query: 424 VRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIH 483
L++LEP S N +++AN Y+ +G W++ +R MK +G+KKM G S +E+ ++
Sbjct: 441 ALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVY 500
Query: 484 RFYSGYDSQVELAGIYQILETLNLHMK 510
+F SG + ++ I++IL+ ++L ++
Sbjct: 501 KFISGDLTHPQVERIHEILQEMDLQIQ 527
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 273 bits (699), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/500 (32%), Positives = 258/500 (51%), Gaps = 41/500 (8%)
Query: 37 LCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP 96
L C KK +H + GL ++ + LV+ +L ++ AR + + V
Sbjct: 151 LACGKK----LHCHVVKFGLGSNLYVQNALVKMYSLCGLMDM--ARGVFDRRCKEDV-FS 203
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN +I GY E++ + ++M+R + PT T VL AC+++ + +V V+
Sbjct: 204 WNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVS 263
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE--NLWLG-- 212
+ + + N LV Y +C A ++F M R V+SW I+ VE NL L
Sbjct: 264 ECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLART 323
Query: 213 ---------------------------EAVGYFVKMKDLGFEPDETTMLVVLSACTELGN 245
E++ F +M+ G PDE TM+ VL+AC LG+
Sbjct: 324 YFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGS 383
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILG 305
L +G+W+ + + + +G ALIDMY KCG A+ +F M++ + +TW+AM++G
Sbjct: 384 LEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVG 443
Query: 306 LAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKP 365
LA +G +EA+++F M++ SI P+ +T+LGVL ACNH+GMV+ ++F +M H I+P
Sbjct: 444 LANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEP 503
Query: 366 MRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVR 425
+HY M D+L RAG +KEAY + MP PN IV ALL AS +H+ + +
Sbjct: 504 SLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHN---DEPMAELAA 560
Query: 426 RRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRF 485
+++LELEP ++ N YA W+ + VRR + +V +KK G S +E+ G H F
Sbjct: 561 KKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEF 620
Query: 486 YSGYDSQVELAGIYQILETL 505
+G S ++ IY LE L
Sbjct: 621 VAGDKSHLQSEEIYMKLEEL 640
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 167/351 (47%), Gaps = 33/351 (9%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+S L +C + Q+H+Q G+ + K+L F +++YA +
Sbjct: 38 ISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEP 97
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG-LNEGMQ 150
V + WNN+I+G++ D E V ++++M + G+ P T+PF+L G L G +
Sbjct: 98 DVVV-WNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKK 156
Query: 151 VQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLW 210
+ +V K GL S++Y N LV+ Y C A VFD C+ V SWN++I+
Sbjct: 157 LHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKE 216
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
E++ V+M+ P T+L+VLSAC+++ + L K VH + E T + +L A
Sbjct: 217 YEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENA 276
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINV--WT-----------------------------W 299
L++ YA CG + A +F M+ +V WT W
Sbjct: 277 LVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISW 336
Query: 300 SAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
+ MI G + G E+LE+F M+++ + P+ T + VL AC H G +E G
Sbjct: 337 TIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG 387
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 129/286 (45%), Gaps = 9/286 (3%)
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT- 241
A K+F + E VV WN +I + GE V ++ M G PD T +L+
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
+ G L+ GK +H +++ G N + AL+ MY+ CG + AR +F R + +V++W+
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
MI G + EE++EL M+ + +SP VT L VL AC+ +D + HE
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVK-DKDLCKRVHEYVSEC 265
Query: 362 GIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVG 421
+P + + + A G + A +M R ++S +SI + G
Sbjct: 266 KTEPSLRLENALVNAYAACGEMDIAVRIFRSMK-------ARDVISWTSIVKGYVERGNL 318
Query: 422 NEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGL 467
R ++ R + I+ + Y G + + + R M++ G+
Sbjct: 319 KLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 273 bits (698), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 234/419 (55%), Gaps = 12/419 (2%)
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
D +P I W +I Y+ ++A+ + + M R ++P +TY VL++C +G++
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSC---NGMS 176
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
+ + + K GL+SDV+ + L+ + DA VFD+M + WN II
Sbjct: 177 DVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+N A+ F +MK GF ++ T+ VL ACT L L LG H+ +++ L
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDL--I 294
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
L AL+DMY KCG++ A +F++M+E +V TWS MI GLAQ+GY++EAL+LF MK+S
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSG 354
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
PNY+T +GVL AC+HAG++EDG+ YF M+ ++GI P+R HY M D+L +AG L +A
Sbjct: 355 TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDA 414
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKY 446
+ M +P+ + R LL A + + ++++ L+P + +++N Y
Sbjct: 415 VKLLNEMECEPDAVTWRTLLGACRVQRNMV---LAEYAAKKVIALDPEDAGTYTLLSNIY 471
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
A W+ V +R M++ G+KK G SW+E+ IH F G +S ++ + + L L
Sbjct: 472 ANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQL 530
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 161/357 (45%), Gaps = 18/357 (5%)
Query: 83 SILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI 142
++ C+Y + + + R D PR A+ ++ G+ TY ++K C
Sbjct: 16 TLRCSYSSTDQTLLLSEFTRLCYQRDLPR-AMKAMDSLQSHGLWADSATYSELIKCCISN 74
Query: 143 SGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII 202
++EG + ++ +G ++ N L+ Y DA ++FD M +R+V+SW +I
Sbjct: 75 RAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMI 134
Query: 203 TVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV 262
+ + +A+ V M P+ T VL +C + ++ + +H +I+ G
Sbjct: 135 SAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLE 191
Query: 263 LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM 322
+ + +ALID++AK G A +F M + W+++I G AQ+ ++ ALELF M
Sbjct: 192 SDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRM 251
Query: 323 KNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR--IHYHTMADILARA 380
K + T VL AC ++E G + HVH +K + I + + D+ +
Sbjct: 252 KRAGFIAEQATLTSVLRACTGLALLELGMQ-----AHVHIVKYDQDLILNNALVDMYCKC 306
Query: 381 GHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
G L++A N + R +++ S++ Q+G E + ++ G++
Sbjct: 307 GSLEDALRVF-------NQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
N + + I W+ +I G A + +EA+ +F MK G KP T VL AC+ L
Sbjct: 317 NQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLE 376
Query: 147 EGMQVQANVTK-SGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM-CERSVVSWNVIITV 204
+G ++ K G+D ++ G + DA K+ ++M CE V+W ++
Sbjct: 377 DGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Query: 205 C--VENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
C N+ L E + K + +P++ +LS
Sbjct: 437 CRVQRNMVLAE----YAAKKVIALDPEDAGTYTLLS 468
>sp|Q9LXF2|PP385_ARATH Pentatricopeptide repeat-containing protein At5g15300
OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2
Length = 548
Score = 271 bits (694), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 166/511 (32%), Positives = 268/511 (52%), Gaps = 80/511 (15%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIP- 96
C + + L QIHA + V+GL ++ ++ EL+ +LS L YA + D +P P
Sbjct: 22 CKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLF-----DEIPKPD 76
Query: 97 ---WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
N+++RG A S +P + V ++ +M++RG+ P +T+ FVLKAC+++ + G
Sbjct: 77 VSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHG 136
Query: 154 NVTKSGLDSDVYTNNNLVRFYGSC------------------------------RRKRD- 182
V + G + Y N L+ F+ +C R K D
Sbjct: 137 KVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDE 196
Query: 183 ACKVFDDMCERSVVSWNVIITVCVE----------------------NLWLG-------- 212
A ++FD+M + V+WNV+IT C++ N +
Sbjct: 197 AMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYP 256
Query: 213 -EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-----LNCQ 266
EA+G F +M+D G PD T+L +LSAC LG+L GK +H+ ++E +V +
Sbjct: 257 KEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTP 316
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+ ALIDMYAKCG++ A +F +++ ++ TW+ +I+GLA H +AE ++E+F M+
Sbjct: 317 IWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLK 375
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+ PN VTF+GV+ AC+H+G V++G +YF M ++ I+P HY M D+L RAG L+EA
Sbjct: 376 VWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEA 435
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKY 446
+ F+ +M +PN IV R LL A I+ NE +LL + S + V+++N Y
Sbjct: 436 FMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANE---KLLSMRKDESGDYVLLSNIY 492
Query: 447 AEVGMWEKVSNVRRFMKNVGLKKMKGMSWVE 477
A G W+ V VR+ + +KK G+S +E
Sbjct: 493 ASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 126/292 (43%), Gaps = 19/292 (6%)
Query: 126 KPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRK---RD 182
+ T P + + C I L Q+ A++ +GL S++ L+ + S +
Sbjct: 9 RTTNRRRPKLWQNCKNIRTLK---QIHASMVVNGLMSNLSVVGELI-YSASLSVPGALKY 64
Query: 183 ACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTE 242
A K+FD++ + V N ++ +++ + V + +M+ G PD T VL AC++
Sbjct: 65 AHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSK 124
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
L S G H +++ G VLN + ALI +A CG +G A LF + + WS+M
Sbjct: 125 LEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSM 184
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
G A+ G +EA+ LF M V G L C + + F E + V
Sbjct: 185 TSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCL-KCKEMDSARELFDRFTEKDVV-- 241
Query: 363 IKPMRIHYHTMADILARAGHLKEAYTFIMNM---PFQPNPIVLRALLSASSI 411
++ M G+ KEA M P+ + + +LLSA ++
Sbjct: 242 ------TWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAV 287
>sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920
OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1
Length = 606
Score = 270 bits (689), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 160/487 (32%), Positives = 260/487 (53%), Gaps = 7/487 (1%)
Query: 27 KARQCLSFLKLCCSKKHLYQIHAQ-IQVSGLQNDAQILKELVRFCTLSSSKN-LTYARSI 84
K ++CL LK C + Q+HA+ I++S + + ++ C S +N + YA SI
Sbjct: 29 KEQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASI 88
Query: 85 LCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
++D +N +IRGY EA+ + +M +RG +P FTYP +LKAC +
Sbjct: 89 F-RGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKS 147
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
+ EG Q+ V K GL++DV+ N+L+ YG C + VF+ + ++ SW+ +++
Sbjct: 148 IREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSA 207
Query: 205 CVENLWLGEAVGYFVKM-KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
E + F M + + +E+ M+ L AC G L+LG +H L+ + L
Sbjct: 208 RAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISEL 267
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
N + T+L+DMY KCG + A +F +ME+ N T+SAMI GLA HG E AL +FS M
Sbjct: 268 NIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMI 327
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+ P++V ++ VL AC+H+G+V++G R F EM ++P HY + D+L RAG L
Sbjct: 328 KEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLL 387
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
+EA I ++P + N ++ R LS + + +G + LL+L + ++++
Sbjct: 388 EEALETIQSIPIEKNDVIWRTFLSQCRV---RQNIELGQIAAQELLKLSSHNPGDYLLIS 444
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N Y++ MW+ V+ R + GLK+ G S VEL G HRF S S + IY++L
Sbjct: 445 NLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLH 504
Query: 504 TLNLHMK 510
+ +K
Sbjct: 505 QMEWQLK 511
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 270 bits (689), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 182/529 (34%), Positives = 255/529 (48%), Gaps = 48/529 (9%)
Query: 22 SDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYA 81
S L+SK C++ + QIH + GL IL +L+R T YA
Sbjct: 50 SSLISKLDDCINL-------NQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYA 102
Query: 82 RSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAE 141
R ++ V P W +IRGYA + EA+ ++ M++ I P FT+ +LKAC
Sbjct: 103 RRVI-EPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 142 ISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVI 201
+ LN G Q A + VY N ++ Y C A KVFD+M ER V+SW +
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 202 ITV--------CVENL-----------WLG------------EAVGYFVKMKDLGFEPDE 230
I C L W EA+ YF +M+ G DE
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 231 TTMLVVLSACTELGNLSLGKWVHLQLIERGTVL---NCQLGTALIDMYAKCGAVGCARLL 287
T+ +SAC +LG +Q+ ++ + +G+ALIDMY+KCG V A +
Sbjct: 282 VTVAGYISACAQLGASKYADRA-VQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNV 340
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGM 346
F M NV+T+S+MILGLA HG A+EAL LF M + I PN VTF+G L AC+H+G+
Sbjct: 341 FMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGL 400
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALL 406
V+ G + F M G++P R HY M D+L R G L+EA I M +P+ V ALL
Sbjct: 401 VDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALL 460
Query: 407 SASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVG 466
A IH+ + E L ELEP N ++++N YA G W V VR+ +K G
Sbjct: 461 GACRIHNNPEIAEIAAE---HLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKG 517
Query: 467 LKKMKGMSW-VELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
LKK +SW V+ G +H+F+ G + I LE L + VL +
Sbjct: 518 LKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGY 566
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 266 bits (681), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/447 (33%), Positives = 244/447 (54%), Gaps = 39/447 (8%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN++I G+ P +A+ +F M+ +K + T VL ACA+I L G QV +
Sbjct: 198 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY 257
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS-------------------- 194
+ ++ ++ ++ N ++ Y C DA ++FD M E+
Sbjct: 258 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 317
Query: 195 -----------VVSWNVIITVCVENLWLGEAVGYFVKMK-DLGFEPDETTMLVVLSACTE 242
+V+WN +I+ +N EA+ F +++ + ++ T++ LSAC +
Sbjct: 318 REVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQ 377
Query: 243 LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAM 302
+G L LG+W+H + + G +N + +ALI MY+KCG + +R +F+ +E+ +V+ WSAM
Sbjct: 378 VGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAM 437
Query: 303 ILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHG 362
I GLA HG EA+++F M+ +++ PN VTF V CAC+H G+V++ FH+ME +G
Sbjct: 438 IGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYG 497
Query: 363 IKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGN 422
I P HY + D+L R+G+L++A FI MP P+ V ALL A IH +
Sbjct: 498 IVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIH---ANLNLAE 554
Query: 423 EVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSI 482
RLLELEPR V+++N YA++G WE VS +R+ M+ GLKK G S +E+ G I
Sbjct: 555 MACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMI 614
Query: 483 HRFYSGYD----SQVELAGIYQILETL 505
H F SG + S+ +++++E L
Sbjct: 615 HEFLSGDNAHPMSEKVYGKLHEVMEKL 641
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/451 (30%), Positives = 215/451 (47%), Gaps = 57/451 (12%)
Query: 15 PKPSNCNSDLLSKAR-QCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLS 73
P SN N + R + +S ++ C S + L Q H + +G +D +L LS
Sbjct: 16 PNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALS 75
Query: 74 SSKNLTYARSILCNYVNDSVPIP----WNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPT 128
S +L YAR + D +P P WN LIR YA P ++W F+DM P
Sbjct: 76 SFASLEYARKVF-----DEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 129 EFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFD 188
++T+PF++KA AE+S L+ G + KS + SDV+ N+L+ Y SC ACKVF
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFT 190
Query: 189 DMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSL 248
+ E+ VVSWN +I V+ +A+ F KM+ + TM+ VLSAC ++ NL
Sbjct: 191 TIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEF 250
Query: 249 GKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA- 307
G+ V + E +N L A++DMY KCG++ A+ LF MEE + TW+ M+ G A
Sbjct: 251 GRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAI 310
Query: 308 ------------------------------QHGYAEEALELFSNMK-NSSISPNYVTFLG 336
Q+G EAL +F ++ ++ N +T +
Sbjct: 311 SEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVS 370
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL---ARAGHLKEAYTFIMNM 393
L AC G +E G R+ H HGI R+++H + ++ ++ G L+++ + N
Sbjct: 371 TLSACAQVGALELG-RWIHSYIKKHGI---RMNFHVTSALIHMYSKCGDLEKSRE-VFNS 425
Query: 394 PFQPNPIVLRALLSASSIHDAKYQDGVGNEV 424
+ + V A++ ++H G GNE
Sbjct: 426 VEKRDVFVWSAMIGGLAMH------GCGNEA 450
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 266 bits (680), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 247/468 (52%), Gaps = 9/468 (1%)
Query: 46 QIHAQIQVSGLQNDAQI-LKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGY 104
Q+H+ SGL +D + L ++ C S+ ++ R + + + D + W LI GY
Sbjct: 290 QLHSWAIRSGLVDDVECSLVDMYAKC--SADGSVDDCRKVF-DRMEDHSVMSWTALITGY 346
Query: 105 AWS-DRPREAVWVFIDMKRRG-IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
+ + EA+ +F +M +G ++P FT+ KAC +S G QV K GL S
Sbjct: 347 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS 406
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
+ N+++ + R DA + F+ + E+++VS+N + NL +A ++
Sbjct: 407 NSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEIT 466
Query: 223 DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG 282
+ T +LS +G++ G+ +H Q+++ G N + ALI MY+KCG++
Sbjct: 467 ERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSID 526
Query: 283 CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
A +F+ ME NV +W++MI G A+HG+A LE F+ M + PN VT++ +L AC+
Sbjct: 527 TASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACS 586
Query: 343 HAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVL 402
H G+V +G+R+F+ M H IKP HY M D+L RAG L +A+ FI MPFQ + +V
Sbjct: 587 HVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVW 646
Query: 403 RALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFM 462
R L A +H +G R++LEL+P + ++N YA G WE+ + +RR M
Sbjct: 647 RTFLGACRVHS---NTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKM 703
Query: 463 KNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
K L K G SW+E+G IH+FY G + IY L+ L +K
Sbjct: 704 KERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIK 751
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 142/256 (55%), Gaps = 9/256 (3%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W+ ++ Y + R +A+ VF++ G+ P ++ Y V++AC+ + G
Sbjct: 132 VSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGF 191
Query: 155 VTKSG-LDSDVYTNNNLVRFYGSCRRK-RDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
+ K+G +SDV +L+ + +A KVFD M E +VV+W ++IT C++ +
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPR 251
Query: 213 EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
EA+ +F+ M GFE D+ T+ V SAC EL NLSLGK +H I G V + + +L+
Sbjct: 252 EAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVE--CSLV 309
Query: 273 DMYAKC---GAVGCARLLFSRMEEINVWTWSAMILGLAQH-GYAEEALELFSNM-KNSSI 327
DMYAKC G+V R +F RME+ +V +W+A+I G ++ A EA+ LFS M +
Sbjct: 310 DMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHV 369
Query: 328 SPNYVTFLGVLCACNH 343
PN+ TF AC +
Sbjct: 370 EPNHFTFSSAFKACGN 385
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 109/241 (45%), Gaps = 14/241 (5%)
Query: 111 REAVWVFIDMKRRGIKPTE-FTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNN 169
R AV M R GI+P + T+ +LK+C G V A + + ++ D N+
Sbjct: 43 RGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNS 102
Query: 170 LVRFYGSCRRKRDACKVFDDM---CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
L+ Y A VF+ M +R VVSW+ ++ N +A+ FV+ +LG
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162
Query: 227 EPDETTMLVVLSACTE-----LGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC-GA 280
P++ V+ AC+ +G ++LG + E + C +LIDM+ K +
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGC----SLIDMFVKGENS 218
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
A +F +M E+NV TW+ MI Q G+ EA+ F +M S + T V A
Sbjct: 219 FENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSA 278
Query: 341 C 341
C
Sbjct: 279 C 279
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 4/141 (2%)
Query: 214 AVGYFVKMKDLGFEP-DETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALI 272
AV M G P D T +L +C + LGK VH +LIE + L +LI
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 273 DMYAKCGAVGCARLLFSRMEEI---NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
+Y+K G A +F M +V +WSAM+ +G +A+++F + P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 330 NYVTFLGVLCACNHAGMVEDG 350
N + V+ AC+++ V G
Sbjct: 165 NDYCYTAVIRACSNSDFVGVG 185
>sp|O64705|PP184_ARATH Pentatricopeptide repeat-containing protein At2g34400
OS=Arabidopsis thaliana GN=PCMP-E23 PE=3 SV=2
Length = 621
Score = 265 bits (678), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 152/446 (34%), Positives = 238/446 (53%), Gaps = 12/446 (2%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H+ + GL+ D I L+ + + YAR + + + + + WN++I GY+
Sbjct: 154 VHSSLFKVGLERDVHINHSLI--MMYAKCGQVGYARKLF-DEITERDTVSWNSMISGYSE 210
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+ ++A+ +F M+ G +P E T +L AC+ + L G ++ + +
Sbjct: 211 AGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFL 270
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
+ L+ YG C A +VF+ M ++ V+W +ITV +N EA F +M+ G
Sbjct: 271 GSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGV 330
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
PD T+ VLSAC +G L LGK + E N + T L+DMY KCG V A
Sbjct: 331 SPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALR 390
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGM 346
+F M N TW+AMI A G+A+EAL LF M S+ P+ +TF+GVL AC HAG+
Sbjct: 391 VFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGL 447
Query: 347 VEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALL 406
V G RYFHEM + G+ P HY + D+L+RAG L EA+ F+ P +P+ I+L A+L
Sbjct: 448 VHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAIL 507
Query: 407 SASSIHDAKYQD-GVGNEVRRRLLEL-EPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKN 464
A K +D + + R L+E+ E + + N VI +N A++ MW++ + +R M++
Sbjct: 508 GACH----KRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRD 563
Query: 465 VGLKKMKGMSWVELGGSIHRFYSGYD 490
G+ K G SW+E+ G + F +G D
Sbjct: 564 RGVVKTPGCSWIEIEGELMEFLAGSD 589
Score = 196 bits (497), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 129/412 (31%), Positives = 205/412 (49%), Gaps = 40/412 (9%)
Query: 29 RQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNY 88
R L LK C S L QI AQ+ + ++ ++ + V + S S L +
Sbjct: 38 RDFLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYS-------SFLFSV 90
Query: 89 VNDSVPIPWNNLIRGYA--WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
+ +N +IRG W+D A+ ++ MK G+KP +FTY FV ACA++ +
Sbjct: 91 TEEPNHYSFNYMIRGLTNTWNDH-EAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIG 149
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G V +++ K GL+ DV+ N++L+ Y C + A K+FD++ ER VSWN +I+
Sbjct: 150 VGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYS 209
Query: 207 ENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
E + +A+ F KM++ GFEPDE T++ +L AC+ LG+L G+ + I + L+
Sbjct: 210 EAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTF 269
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
LG+ LI MY KCG + AR +F++M + + W+AMI +Q+G + EA +LF M+ +
Sbjct: 270 LGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTG 329
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYR---YFHEMEHVHGI-----------------KPM 366
+SP+ T VL AC G +E G + + E+ H I + +
Sbjct: 330 VSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEAL 389
Query: 367 RIH----------YHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
R+ ++ M A GH KEA M P+ I +LSA
Sbjct: 390 RVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSDITFIGVLSA 441
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 265 bits (677), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 145/415 (34%), Positives = 226/415 (54%), Gaps = 11/415 (2%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN ++ GY S + + +F M ++G + +FT V K C + +N+G QV A
Sbjct: 483 VAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAY 542
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
KSG D D++ ++ ++ Y C A FD + V+W +I+ C+EN A
Sbjct: 543 AIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERA 602
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ----LGTA 270
F +M+ +G PDE T+ + A + L L G+ +H ++ LNC +GT+
Sbjct: 603 FHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALK----LNCTNDPFVGTS 658
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
L+DMYAKCG++ A LF R+E +N+ W+AM++GLAQHG +E L+LF MK+ I P+
Sbjct: 659 LVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPD 718
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
VTF+GVL AC+H+G+V + Y++ M +GIKP HY +AD L RAG +K+A I
Sbjct: 719 KVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLI 778
Query: 391 MNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVG 450
+M + + + R LL+A + G V +LLELEP S V+++N YA
Sbjct: 779 ESMSMEASASMYRTLLAACRVQG---DTETGKRVATKLLELEPLDSSAYVLLSNMYAAAS 835
Query: 451 MWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
W+++ R MK +KK G SW+E+ IH F S + IY+ ++ +
Sbjct: 836 KWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDM 890
Score = 112 bits (279), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 158/344 (45%), Gaps = 8/344 (2%)
Query: 46 QIHAQIQVSGLQNDAQILKELVR-FCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGY 104
Q+H GL + L+ +C L + +AR++ N +++ I WN++I G
Sbjct: 336 QVHCMALKLGLDLMLTVSNSLINMYCKL---RKFGFARTVFDN-MSERDLISWNSVIAGI 391
Query: 105 AWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI-SGLNEGMQVQANVTKSGLDSD 163
A + EAV +F+ + R G+KP ++T VLKA + + GL+ QV + K SD
Sbjct: 392 AQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSD 451
Query: 164 VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKD 223
+ + L+ Y R ++A +F+ +V+WN ++ ++ + + F M
Sbjct: 452 SFVSTALIDAYSRNRCMKEAEILFERH-NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHK 510
Query: 224 LGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGC 283
G D+ T+ V C L ++ GK VH I+ G L+ + + ++DMY KCG +
Sbjct: 511 QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSA 570
Query: 284 ARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNH 343
A+ F + + W+ MI G ++G E A +FS M+ + P+ T + A +
Sbjct: 571 AQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSC 630
Query: 344 AGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAY 387
+E G R H ++ D+ A+ G + +AY
Sbjct: 631 LTALEQG-RQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAY 673
Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 119/273 (43%), Gaps = 42/273 (15%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN-EGMQVQ- 152
+ WN +++ Y EA+ + G+ P E T L+ A ISG + + QV+
Sbjct: 212 VLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT----LRLLARISGDDSDAGQVKS 267
Query: 153 -ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWL 211
AN + S++ N + Y + K F DM E V
Sbjct: 268 FANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDV---------------- 311
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
E D+ T +++L+ ++ +L+LG+ VH ++ G L + +L
Sbjct: 312 ---------------ECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSL 356
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
I+MY K G AR +F M E ++ +W+++I G+AQ+G EA+ LF + + P+
Sbjct: 357 INMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQ 416
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIK 364
T VL A A + +G ++ HVH IK
Sbjct: 417 YTMTSVLKA---ASSLPEGLSLSKQV-HVHAIK 445
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 9/174 (5%)
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV-------CVENLWLGEAVGYFVK 220
NNL+ Y C A +VFD M +R +VSWN I+ VEN+ +A F
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQ--QAFLLFRI 135
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
++ T+ +L C G + + H + G + + AL+++Y K G
Sbjct: 136 LRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGK 195
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
V ++LF M +V W+ M+ + G+ EEA++L S +S ++PN +T
Sbjct: 196 VKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 6/166 (3%)
Query: 73 SSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWS-----DRPREAVWVFIDMKRRGIKP 127
S +LTYAR + + + D + WN+++ YA S + ++A +F +++ +
Sbjct: 85 SKCGSLTYARRVF-DKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYT 143
Query: 128 TEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVF 187
+ T +LK C + K GLD D + LV Y + ++ +F
Sbjct: 144 SRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLF 203
Query: 188 DDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTM 233
++M R VV WN+++ +E + EA+ G P+E T+
Sbjct: 204 EEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 265 bits (676), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 164/508 (32%), Positives = 264/508 (51%), Gaps = 41/508 (8%)
Query: 42 KHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
K + QIHA++ V G D ++ V+ LS K L YA IL + N++I
Sbjct: 20 KEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQIL-DRSEKPTLFALNSMI 78
Query: 102 RGYAWSDRPREAVWVFIDMKRRG--IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSG 159
R + S P ++ + + G +KP +T F+++AC + G+QV + G
Sbjct: 79 RAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRG 138
Query: 160 LDSDVYTNNNLVRFYG----------------------------SCRRKRD---ACKVFD 188
D+D + L+ Y +C R D A K+F+
Sbjct: 139 FDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFE 198
Query: 189 DMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSL 248
M ER ++WN +I+ + EA+ F M+ G + + M+ VLSACT+LG L
Sbjct: 199 GMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQ 258
Query: 249 GKWVHLQLIERGTV-LNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLA 307
G+W H IER + + +L T L+D+YAKCG + A +F MEE NV+TWS+ + GLA
Sbjct: 259 GRWAH-SYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLA 317
Query: 308 QHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMR 367
+G+ E+ LELFS MK ++PN VTF+ VL C+ G V++G R+F M + GI+P
Sbjct: 318 MNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQL 377
Query: 368 IHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD-GVGNEVRR 426
HY + D+ ARAG L++A + I MP +P+ V +LL AS + Y++ +G +
Sbjct: 378 EHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRM----YKNLELGVLASK 433
Query: 427 RLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFY 486
++LELE V+++N YA+ W+ VS+VR+ MK+ G++K G S +E+ G +H F+
Sbjct: 434 KMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFF 493
Query: 487 SGYDSQVELAGIYQILETLNLHMKVLNF 514
G S + I + + ++ +++ +
Sbjct: 494 VGDKSHPKYTQIDAVWKDISRRLRLAGY 521
>sp|Q9SN85|PP267_ARATH Pentatricopeptide repeat-containing protein At3g47530
OS=Arabidopsis thaliana GN=PCMP-H76 PE=2 SV=1
Length = 591
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/490 (32%), Positives = 249/490 (50%), Gaps = 12/490 (2%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLS-SSKNLTYARSILCNYVN 90
LS + K HL QIHA + + L ++ + + LS +++ Y+ + +N
Sbjct: 15 LSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLN 74
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTE-FTYPFVLKACAEISGLNEGM 149
++ N +IR ++ S P E +F ++R P + F LK C + L G+
Sbjct: 75 PTLS-HCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGL 133
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ + G SD L+ Y +C DACKVFD++ +R VSWNV+ + + N
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNK 193
Query: 210 WLGEAVGYFVKMK---DLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQ 266
+ + F KMK D +PD T L+ L AC LG L GK VH + E G
Sbjct: 194 RTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALN 253
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
L L+ MY++CG++ A +F M E NV +W+A+I GLA +G+ +EA+E F+ M
Sbjct: 254 LSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFG 313
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH-GIKPMRIHYHTMADILARAGHLKE 385
ISP T G+L AC+H+G+V +G +F M IKP HY + D+L RA L +
Sbjct: 314 ISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDK 373
Query: 386 AYTFIMNMPFQPNPIVLRALLSASSIH-DAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
AY+ I +M +P+ + R LL A +H D + +G V L+EL+ + + V++ N
Sbjct: 374 AYSLIKSMEMKPDSTIWRTLLGACRVHGDVE----LGERVISHLIELKAEEAGDYVLLLN 429
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILET 504
Y+ VG WEKV+ +R MK + G S +EL G++H F S IY++L
Sbjct: 430 TYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAE 489
Query: 505 LNLHMKVLNF 514
+N +K+ +
Sbjct: 490 INQQLKIAGY 499
>sp|Q9SJG6|PP200_ARATH Pentatricopeptide repeat-containing protein At2g42920,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2
SV=1
Length = 559
Score = 263 bits (672), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 162/507 (31%), Positives = 259/507 (51%), Gaps = 48/507 (9%)
Query: 38 CCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPW 97
C + + L QIHA + +GL +D ++ FC S S ++ YA + +N P W
Sbjct: 35 CSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPS-DMNYAYLVFTR-INHKNPFVW 92
Query: 98 NNLIRGYAWSDRPREAVWVFIDM--KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANV 155
N +IRG++ S P A+ +FIDM +KP TYP V KA + +G Q+ V
Sbjct: 93 NTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMV 152
Query: 156 TKSGLDSDVYTNNNLVRFYGSCRRKRDACKVF---------------------------- 187
K GL+ D + N ++ Y +C +A ++F
Sbjct: 153 IKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQ 212
Query: 188 ---DDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELG 244
D+M +R+ VSWN +I+ V N +A+ F +M++ +PD TM+ +L+AC LG
Sbjct: 213 NLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLG 272
Query: 245 NLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMIL 304
G+W+H ++ LN + TALIDMY KCG + +F + + W++MIL
Sbjct: 273 ASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMIL 332
Query: 305 GLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIK 364
GLA +G+ E A++LFS ++ S + P+ V+F+GVL AC H+G V +F M+ + I+
Sbjct: 333 GLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIE 392
Query: 365 PMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGN-E 423
P HY M ++L AG L+EA I NMP + + ++ +LLSA +GN E
Sbjct: 393 PSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACR--------KIGNVE 444
Query: 424 VRRR----LLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELG 479
+ +R L +L+P + V+++N YA G++E+ R MK ++K G S +E+
Sbjct: 445 MAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVD 504
Query: 480 GSIHRFYSGYDSQVELAGIYQILETLN 506
+H F S + + A IY +L+ LN
Sbjct: 505 FEVHEFISCGGTHPKSAEIYSLLDILN 531
>sp|Q9LXY5|PP284_ARATH Pentatricopeptide repeat-containing protein At3g56550
OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1
Length = 581
Score = 261 bits (668), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 152/490 (31%), Positives = 265/490 (54%), Gaps = 15/490 (3%)
Query: 24 LLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARS 83
+ KAR + L+ C S K L +IH+ + ++GLQ+ I L+RFC +S + +L++A+
Sbjct: 1 MCEKARVIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQL 60
Query: 84 ILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGI-KPTEFTYPFVLKACAEI 142
+ ++ +D WN LIRG++ S P ++ + M + +P FT+ F LK+C I
Sbjct: 61 LFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERI 120
Query: 143 SGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII 202
+ + +++ +V +SG D +LVR Y + A KVFD+M R +VSWNV+I
Sbjct: 121 KSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMI 180
Query: 203 TVCVENLWL-GEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGT 261
C ++ L +A+ + +M + G D T++ +LS+C + L++G +H +
Sbjct: 181 C-CFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACD--- 236
Query: 262 VLNCQ----LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALE 317
+ C+ + ALIDMYAKCG++ A +F+ M + +V TW++MI+G HG+ EA+
Sbjct: 237 -IRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAIS 295
Query: 318 LFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADIL 377
F M S + PN +TFLG+L C+H G+V++G +F M + P HY M D+
Sbjct: 296 FFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLY 355
Query: 378 ARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQ 437
RAG L+ + I +P++ R LL + IH +G ++L++LE +
Sbjct: 356 GRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHR---NLELGEVAMKKLVQLEAFNAG 412
Query: 438 NLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAG 497
+ V++ + Y+ + +++R+ +++ L+ + G SW+E+G +H+F E A
Sbjct: 413 DYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAV 472
Query: 498 IYQIL-ETLN 506
IY L E +N
Sbjct: 473 IYSELGEVIN 482
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 260 bits (665), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 161/467 (34%), Positives = 244/467 (52%), Gaps = 25/467 (5%)
Query: 52 QVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN------DSVPIP----WNNLI 101
Q+ GL +++ + C+L YAR C ++N D + P WN +I
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCD----MYAR---CGFLNSARRVFDQIERPDTASWNVII 343
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
G A + EAV VF M+ G P + +L A + L++GMQ+ + + K G
Sbjct: 344 AGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFL 403
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS-VVSWNVIITVCVENLWLGEAVGYFVK 220
+D+ N+L+ Y C +F+D + VSWN I+T C+++ E + F
Sbjct: 404 ADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKL 463
Query: 221 MKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGA 280
M EPD TM +L C E+ +L LG VH ++ G + LIDMYAKCG+
Sbjct: 464 MLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGS 523
Query: 281 VGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
+G AR +F M+ +V +WS +I+G AQ G+ EEAL LF MK++ I PN+VTF+GVL A
Sbjct: 524 LGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTA 583
Query: 341 CNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPI 400
C+H G+VE+G + + M+ HGI P + H + D+LARAG L EA FI M +P+ +
Sbjct: 584 CSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVV 643
Query: 401 VLRALLSASSIHDAKYQDGV--GNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNV 458
V + LLSA K Q V + +L+++P S V++ + +A G WE + +
Sbjct: 644 VWKTLLSA-----CKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALL 698
Query: 459 RRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETL 505
R MK +KK+ G SW+E+ IH F++ E IY +L +
Sbjct: 699 RSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNI 745
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 162/324 (50%), Gaps = 7/324 (2%)
Query: 21 NSDLLSKARQCLSFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKN 77
NS + R +S + C S + L Q IH I S + D + ++ +
Sbjct: 60 NSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSM--YGKCGS 117
Query: 78 LTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLK 137
L AR + +++ + + + ++I GY+ + + EA+ +++ M + + P +F + ++K
Sbjct: 118 LRDAREVF-DFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIK 176
Query: 138 ACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS 197
ACA S + G Q+ A V K S + N L+ Y + DA +VF + + ++S
Sbjct: 177 ACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLIS 236
Query: 198 WNVIITVCVENLWLGEAVGYFVKMKDLG-FEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
W+ II + + EA+ + +M G F P+E L AC+ L G +H
Sbjct: 237 WSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLC 296
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
I+ N G +L DMYA+CG + AR +F ++E + +W+ +I GLA +GYA+EA+
Sbjct: 297 IKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAV 356
Query: 317 ELFSNMKNSSISPNYVTFLGVLCA 340
+FS M++S P+ ++ +LCA
Sbjct: 357 SVFSQMRSSGFIPDAISLRSLLCA 380
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 184/439 (41%), Gaps = 37/439 (8%)
Query: 33 SFLKLCCSKKHL---YQIHAQI----QVSGLQNDAQILKELVRFCTLSSSKNLTYARSIL 85
S +K C S + Q+HAQ+ S L ++ VRF +S + + Y
Sbjct: 173 SIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYG---- 228
Query: 86 CNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGI-KPTEFTYPFVLKACA 140
+P I W+++I G++ EA+ +M G+ P E+ + LKAC+
Sbjct: 229 -------IPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281
Query: 141 EISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNV 200
+ + G Q+ KS L + +L Y C A +VFD + SWNV
Sbjct: 282 SLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNV 341
Query: 201 IITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERG 260
II N + EAV F +M+ GF PD ++ +L A T+ LS G +H +I+ G
Sbjct: 342 IIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWG 401
Query: 261 TVLNCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEALELF 319
+ + + +L+ MY C + C LF + +W+ ++ QH E L LF
Sbjct: 402 FLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLF 461
Query: 320 SNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILAR 379
M S P+++T +L C ++ G + H G+ P + + + D+ A+
Sbjct: 462 KLMLVSECEPDHITMGNLLRGCVEISSLKLGSQ-VHCYSLKTGLAPEQFIKNGLIDMYAK 520
Query: 380 AGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNL 439
G L +A +M R ++S S++ Q G G E E++ G
Sbjct: 521 CGSLGQARRIFDSMDN-------RDVVSWSTLIVGYAQSGFGEEALILFKEMKSAG---- 569
Query: 440 VIVANKYAEVGMWEKVSNV 458
I N VG+ S+V
Sbjct: 570 -IEPNHVTFVGVLTACSHV 587
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 151/353 (42%), Gaps = 45/353 (12%)
Query: 98 NNLIRGYAWSDRPREAVWVF-IDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
N+ I S+ REA+ F K K TY ++ AC+ L +G ++ ++
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
S D NN+++ YG C RDA +VFD M ER++VS+ +IT +N EA+
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
++KM PD+ ++ AC ++ LGK +H Q+I+ + + ALI MY
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV 214
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSI-SPNYVTFL 335
+ + A +F + ++ +WS++I G +Q G+ EAL M + + PN F
Sbjct: 215 RFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFG 274
Query: 336 GVLCACN-----------------------------------HAGMVEDGYRYFHEMEHV 360
L AC+ G + R F ++E
Sbjct: 275 SSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE-- 332
Query: 361 HGIKPMRIHYHTMADILARAGHLKEAYTFIMNM---PFQPNPIVLRALLSASS 410
+P ++ + LA G+ EA + M F P+ I LR+LL A +
Sbjct: 333 ---RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQT 382
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 260 bits (665), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 151/450 (33%), Positives = 231/450 (51%), Gaps = 26/450 (5%)
Query: 63 LKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDR-----PREAVWVF 117
LKE ++ +L SKN+ + +N +I G+ D EA +F
Sbjct: 303 LKEAIKLFSLMPSKNV----------------VTYNAMISGFLQMDEITDEASSEAFKLF 346
Query: 118 IDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSC 177
+DM+RRG++P+ T+ VLKAC+ L G Q+ A + K+ SD + + L+ Y
Sbjct: 347 MDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALM 406
Query: 178 RRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVL 237
D + F ++ + SW +I V+N L A F ++ P+E T+ +++
Sbjct: 407 GSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMM 466
Query: 238 SACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVW 297
SAC + LS G+ + I+ G + T+ I MYAK G + A +F ++ +V
Sbjct: 467 SACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVA 526
Query: 298 TWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM 357
T+SAMI LAQHG A EAL +F +MK I PN FLGVL AC H G+V G +YF M
Sbjct: 527 TYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCM 586
Query: 358 EHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQ 417
++ + I P H+ + D+L R G L +A I++ FQ +P+ RALLS+ + Y+
Sbjct: 587 KNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRV----YK 642
Query: 418 DGV-GNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWV 476
D V G V RL+ELEP S + V++ N Y + G+ VR M++ G+KK +SW+
Sbjct: 643 DSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWI 702
Query: 477 ELGGSIHRFYSGYDSQVELAGIYQILETLN 506
+G H F S IY +LET++
Sbjct: 703 VIGNQTHSFAVADLSHPSSQMIYTMLETMD 732
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 136/294 (46%), Gaps = 18/294 (6%)
Query: 76 KNLTYARSILCNYVNDSVP----IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFT 131
+ L +AR + D +P I +N+LI GY +A+ +F++ + +K +FT
Sbjct: 96 RELGFARQLF-----DRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
Y L C E L+ G + V +GL V+ N L+ Y C + A +FD
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT---ELGNLSL 248
ER VSWN +I+ V E + KM G + VL AC G +
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 249 GKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQ 308
G +H + G + + TAL+DMYAK G++ A LFS M NV T++AMI G Q
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQ 330
Query: 309 HG-----YAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM 357
+ EA +LF +M+ + P+ TF VL AC+ A +E G R H +
Sbjct: 331 MDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYG-RQIHAL 383
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 146/307 (47%), Gaps = 6/307 (1%)
Query: 132 YPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC 191
Y + + A+ + G ++ KS L+ +Y NNL+ Y CR A ++FD M
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 109
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
ER+++S+N +I+ + + +A+ F++ ++ + D+ T L C E +L LG+
Sbjct: 110 ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGEL 169
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+H ++ G L LIDMY+KCG + A LF R +E + +W+++I G + G
Sbjct: 170 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGA 229
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACN---HAGMVEDGYRYFHEMEHVHGIKPMRI 368
AEE L L + M ++ VL AC + G +E G H G++ +
Sbjct: 230 AEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMA-IHCYTAKLGMEFDIV 288
Query: 369 HYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRL 428
+ D+ A+ G LKEA MP N + A++S D + D +E +
Sbjct: 289 VRTALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAMISGFLQMD-EITDEASSEAFKLF 346
Query: 429 LELEPRG 435
++++ RG
Sbjct: 347 MDMQRRG 353
>sp|Q9FIF7|PP435_ARATH Putative pentatricopeptide repeat-containing protein At5g59200,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3
SV=1
Length = 544
Score = 260 bits (665), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 168/530 (31%), Positives = 272/530 (51%), Gaps = 44/530 (8%)
Query: 16 KPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSS 75
+ + N+ LS+ + +S L+ C + H+ IHA+I + DA ++ EL+R C S+
Sbjct: 17 RDPDSNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVC--STL 74
Query: 76 KNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFV 135
++ YA + +YV++ + +I G+ S R + V ++ M + P + V
Sbjct: 75 DSVDYAYDVF-SYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSV 133
Query: 136 LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSV 195
LKAC L ++ A V K G S ++ YG +A K+FD+M +R
Sbjct: 134 LKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDH 189
Query: 196 VSWNVII-----------------------TVC--------VENLWLGEAVGYFVKMKDL 224
V+ V+I TVC V N + +A+ F +M+
Sbjct: 190 VAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQME 249
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCA 284
+E T + VLSAC++LG L LG+WVH + + L+ +G ALI+MY++CG + A
Sbjct: 250 NVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEA 309
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA 344
R +F M + +V +++ MI GLA HG + EA+ F +M N PN VT + +L AC+H
Sbjct: 310 RRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHG 369
Query: 345 GMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRA 404
G+++ G F+ M+ V ++P HY + D+L R G L+EAY FI N+P +P+ I+L
Sbjct: 370 GLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGT 429
Query: 405 LLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKN 464
LLSA IH +G ++ +RL E E S V+++N YA G W++ + +R M++
Sbjct: 430 LLSACKIHGNME---LGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRD 486
Query: 465 VGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
G++K G S +E+ IH F G + IYQ L+ LN ++L F
Sbjct: 487 SGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELN---RILRF 533
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 260 bits (664), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 166/487 (34%), Positives = 259/487 (53%), Gaps = 14/487 (2%)
Query: 31 CL-SFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILC 86
CL S LK C LYQ +H GL D L+ S + AR +
Sbjct: 531 CLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDM--YSKCGIIKDARKVFS 588
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
+ SV + N LI GY+ + EAV +F +M RG+ P+E T+ +++AC + L
Sbjct: 589 SLPEWSV-VSMNALIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLT 646
Query: 147 EGMQVQANVTKSGLDSD-VYTNNNLVRFYGSCRRKRDACKVFDDMCE-RSVVSWNVIITV 204
G Q +TK G S+ Y +L+ Y + R +AC +F ++ +S+V W +++
Sbjct: 647 LGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSG 706
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
+N + EA+ ++ +M+ G PD+ T + VL C+ L +L G+ +H + L+
Sbjct: 707 HSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLD 766
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEE-INVWTWSAMILGLAQHGYAEEALELFSNMK 323
LIDMYAKCG + + +F M NV +W+++I G A++GYAE+AL++F +M+
Sbjct: 767 ELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMR 826
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
S I P+ +TFLGVL AC+HAG V DG + F M +GI+ H M D+L R G+L
Sbjct: 827 QSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYL 886
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
+EA FI +P+ + +LL A IH + + E +L+ELEP+ S V+++
Sbjct: 887 QEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAE---KLIELEPQNSSAYVLLS 943
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N YA G WEK + +R+ M++ G+KK+ G SW+++ H F +G S E+ I LE
Sbjct: 944 NIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLE 1003
Query: 504 TLNLHMK 510
L MK
Sbjct: 1004 DLYDLMK 1010
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 152/296 (51%), Gaps = 4/296 (1%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+HA+ GL ++ + LV ++ S A + + + + + WN +IRGYA
Sbjct: 349 VHAEAIKLGLASNIYVGSSLV---SMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAH 405
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+ + + +F+DMK G +FT+ +L CA L G Q + + K L +++
Sbjct: 406 NGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFV 465
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
N LV Y C DA ++F+ MC+R V+WN II V++ EA F +M G
Sbjct: 466 GNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGI 525
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
D + L ACT + L GK VH ++ G + G++LIDMY+KCG + AR
Sbjct: 526 VSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARK 585
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACN 342
+FS + E +V + +A+I G +Q+ EEA+ LF M ++P+ +TF ++ AC+
Sbjct: 586 VFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACH 640
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 153/316 (48%), Gaps = 2/316 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN +I G+ A+ F +M++ +K T T VL A ++ L+ G+ V A
Sbjct: 293 VAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAE 352
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K GL S++Y ++LV Y C + A KVF+ + E++ V WN +I N +
Sbjct: 353 AIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKV 412
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F+ MK G+ D+ T +LS C +L +G H +I++ N +G AL+DM
Sbjct: 413 MELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDM 472
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
YAKCGA+ AR +F RM + + TW+ +I Q EA +LF M I +
Sbjct: 473 YAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACL 532
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
L AC H + G + H + G+ ++ D+ ++ G +K+A ++P
Sbjct: 533 ASTLKACTHVHGLYQG-KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Query: 395 FQPNPIVLRALLSASS 410
+ + + + AL++ S
Sbjct: 592 -EWSVVSMNALIAGYS 606
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 156/353 (44%), Gaps = 39/353 (11%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
QIH + GL+ ++ LV + ++ AR + ++ D + W L GY
Sbjct: 181 QIHCSMIKMGLERNSYCGGALVDM--YAKCDRISDARRVF-EWIVDPNTVCWTCLFSGYV 237
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVY 165
+ P EAV VF M+ G +P + V+
Sbjct: 238 KAGLPEEAVLVFERMRDEGHRPDHLAFVTVI----------------------------- 268
Query: 166 TNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLG 225
N +R + +DA +F +M VV+WNV+I+ + A+ YF M+
Sbjct: 269 --NTYIRL----GKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSS 322
Query: 226 FEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCAR 285
+ +T+ VLSA + NL LG VH + I+ G N +G++L+ MY+KC + A
Sbjct: 323 VKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAA 382
Query: 286 LLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAG 345
+F +EE N W+AMI G A +G + + +ELF +MK+S + + TF +L C +
Sbjct: 383 KVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASH 442
Query: 346 MVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPN 398
+E G + FH + + + + D+ A+ G L++A M + N
Sbjct: 443 DLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDN 494
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 129/294 (43%), Gaps = 39/294 (13%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H++ + G+ ++ ++ +V + ++YA +++ V WN+++ Y+
Sbjct: 82 VHSKSLILGIDSEGRLGNAIVDL--YAKCAQVSYAEKQF-DFLEKDVT-AWNSMLSMYSS 137
Query: 107 SDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYT 166
+P + + F+ + I P +FT+ VL CA + + G Q+ ++ K GL+ + Y
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYC 197
Query: 167 NNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGF 226
LV Y C R DA +VF+ + + + V W + + V+ EAV F +M+D G
Sbjct: 198 GGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH 257
Query: 227 EPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARL 286
PD HL + +I+ Y + G + ARL
Sbjct: 258 RPD-----------------------HLAFV------------TVINTYIRLGKLKDARL 282
Query: 287 LFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
LF M +V W+ MI G + G A+E F NM+ SS+ T VL A
Sbjct: 283 LFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 123/271 (45%), Gaps = 9/271 (3%)
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
L G V + G+DS+ N +V Y C + A K FD E+ V +WN +++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLS 133
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
+ G+ + FV + + P++ T +VLS C N+ G+ +H +I+ G
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
N G AL+DMYAKC + AR +F + + N W+ + G + G EEA+ +F M+
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
+ P+++ F+ V+ G ++D F EM P + ++ M + G
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKRGCE 308
Query: 384 KEAYTFIMNM---PFQPNPIVLRALLSASSI 411
A + NM + L ++LSA I
Sbjct: 309 TVAIEYFFNMRKSSVKSTRSTLGSVLSAIGI 339
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 258 bits (660), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 160/490 (32%), Positives = 250/490 (51%), Gaps = 20/490 (4%)
Query: 34 FLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVN 90
LK C HL +HAQ+ G D + L+ + + L AR++
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIAL--YAKCRRLGSARTVF----- 177
Query: 91 DSVPIP------WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISG 144
+ +P+P W ++ YA + P EA+ +F M++ +KP VL A +
Sbjct: 178 EGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQD 237
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
L +G + A+V K GL+ + +L Y C + A +FD M +++ WN +I+
Sbjct: 238 LKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISG 297
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
+N + EA+ F +M + PD ++ +SAC ++G+L + ++ + +
Sbjct: 298 YAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDD 357
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+ +ALIDM+AKCG+V ARL+F R + +V WSAMI+G HG A EA+ L+ M+
Sbjct: 358 VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER 417
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ PN VTFLG+L ACNH+GMV +G+ +F+ M H I P + HY + D+L RAGHL
Sbjct: 418 GGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLD 476
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVAN 444
+AY I MP QP V ALLSA H +G ++L ++P + + V ++N
Sbjct: 477 QAYEVIKCMPVQPGVTVWGALLSACKKH---RHVELGEYAAQQLFSIDPSNTGHYVQLSN 533
Query: 445 KYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILET 504
YA +W++V+ VR MK GL K G SWVE+ G + F G S I + +E
Sbjct: 534 LYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEW 593
Query: 505 LNLHMKVLNF 514
+ +K F
Sbjct: 594 IESRLKEGGF 603
Score = 206 bits (523), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 203/382 (53%), Gaps = 7/382 (1%)
Query: 33 SFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDS 92
S + K L QIHA++ V GLQ ++ +L+ SS ++T+AR + +
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIH--ASSSFGDITFARQVFDDLPRPQ 83
Query: 93 VPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQ 152
+ PWN +IRGY+ ++ ++A+ ++ +M+ + P FT+P +LKAC+ +S L G V
Sbjct: 84 I-FPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVH 142
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMC--ERSVVSWNVIITVCVENLW 210
A V + G D+DV+ N L+ Y CRR A VF+ + ER++VSW I++ +N
Sbjct: 143 AQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202
Query: 211 LGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTA 270
EA+ F +M+ + +PD ++ VL+A T L +L G+ +H +++ G + L +
Sbjct: 203 PMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS 262
Query: 271 LIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
L MYAKCG V A++LF +M+ N+ W+AMI G A++GYA EA+++F M N + P+
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322
Query: 331 YVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFI 390
++ + AC G +E R +E + + D+ A+ G + E +
Sbjct: 323 TISITSAISACAQVGSLEQA-RSMYEYVGRSDYRDDVFISSALIDMFAKCGSV-EGARLV 380
Query: 391 MNMPFQPNPIVLRALLSASSIH 412
+ + +V A++ +H
Sbjct: 381 FDRTLDRDVVVWSAMIVGYGLH 402
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 258 bits (660), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 141/422 (33%), Positives = 229/422 (54%), Gaps = 16/422 (3%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRR-GIKPTEFTYPFVLKACAEISGLNEGMQVQANV 155
WN +I GY+ ++ +EA+ +FI M+ G+ T V+ AC + + V
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431
Query: 156 TKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAV 215
K GLD D + N L+ Y + A ++F M +R +V+WN +IT V + +A+
Sbjct: 432 VKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDAL 491
Query: 216 GYFVKMKDL-----------GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
KM++L +P+ T++ +L +C L L+ GK +H I+ +
Sbjct: 492 LLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATD 551
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+G+AL+DMYAKCG + +R +F ++ + NV TW+ +I+ HG +EA++L M
Sbjct: 552 VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMV 611
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
+ PN VTF+ V AC+H+GMV++G R F+ M+ +G++P HY + D+L RAG +K
Sbjct: 612 QGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIK 671
Query: 385 EAYTFIMNMPFQPNPI-VLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVA 443
EAY + MP N +LL AS IH+ +G + L++LEP + + V++A
Sbjct: 672 EAYQLMNMMPRDFNKAGAWSSLLGASRIHN---NLEIGEIAAQNLIQLEPNVASHYVLLA 728
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N Y+ G+W+K + VRR MK G++K G SW+E G +H+F +G S + + LE
Sbjct: 729 NIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLE 788
Query: 504 TL 505
TL
Sbjct: 789 TL 790
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 132/262 (50%), Gaps = 7/262 (2%)
Query: 94 PIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQA 153
P W +L+R S+ REAV ++DM GIKP + +P +LKA A++ + G Q+ A
Sbjct: 62 PEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHA 121
Query: 154 NVTKSGLDSD-VYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVII-TVCVENLWL 211
+V K G D V N LV Y C KVFD + ER+ VSWN +I ++C W
Sbjct: 122 HVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKW- 180
Query: 212 GEAVGYFVKMKDLGFEPDETTMLVVLSACTELG---NLSLGKWVHLQLIERGTVLNCQLG 268
A+ F M D EP T++ V++AC+ L L +GK VH + +G LN +
Sbjct: 181 EMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE-LNSFII 239
Query: 269 TALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSIS 328
L+ MY K G + +++L ++ TW+ ++ L Q+ EALE M +
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 329 PNYVTFLGVLCACNHAGMVEDG 350
P+ T VL AC+H M+ G
Sbjct: 300 PDEFTISSVLPACSHLEMLRTG 321
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 168/363 (46%), Gaps = 29/363 (7%)
Query: 46 QIHAQIQVSGLQND----AQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLI 101
QIHA + G D A L L R C + + R +++ + WN+LI
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR------ISERNQVSWNSLI 171
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEI---SGLNEGMQVQANVTKS 158
++ A+ F M ++P+ FT V+ AC+ + GL G QV A +
Sbjct: 172 SSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK 231
Query: 159 GLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYF 218
G + + + N LV YG + + + R +V+WN +++ +N L EA+ Y
Sbjct: 232 G-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYL 290
Query: 219 VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTV-LNCQLGTALIDMYAK 277
+M G EPDE T+ VL AC+ L L GK +H ++ G++ N +G+AL+DMY
Sbjct: 291 REMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCN 350
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS-ISPNYVTFLG 336
C V R +F M + + W+AMI G +Q+ + +EAL LF M+ S+ + N T G
Sbjct: 351 CKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAG 410
Query: 337 VLCACNHAGMVEDGYRYFHEMEHVH------GIKPMRIHYHTMADILARAGHLKEAYTFI 390
V+ AC +G F E +H G+ R +T+ D+ +R G + A
Sbjct: 411 VVPACVRSGA-------FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIF 463
Query: 391 MNM 393
M
Sbjct: 464 GKM 466
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 14/229 (6%)
Query: 89 VNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMK-----------RRGIKPTEFTYPFVLK 137
+ D + WN +I GY +S+ +A+ + M+ R +KP T +L
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 525
Query: 138 ACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS 197
+CA +S L +G ++ A K+ L +DV + LV Y C + + KVFD + +++V++
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 585
Query: 198 WNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG-KWVHLQL 256
WNVII + EA+ M G +P+E T + V +AC+ G + G + ++
Sbjct: 586 WNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRM-EEIN-VWTWSAMI 303
+ G + ++D+ + G + A L + M + N WS+++
Sbjct: 646 PDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694
Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
RS W ++ V + L EAV +V M LG +PD +L A +L ++ LGK +
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 253 HLQLIERG-TVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
H + + G V + + L+++Y KCG G +F R+ E N +W+++I L
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYH 371
E ALE F M + ++ P+ T + V+ AC++ M E + H +G++ ++
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG--LMMGKQVHAYGLRKGELNSF 237
Query: 372 TMADILARAGHL 383
+ ++A G L
Sbjct: 238 IINTLVAMYGKL 249
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 258 bits (659), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 163/485 (33%), Positives = 240/485 (49%), Gaps = 10/485 (2%)
Query: 33 SFLKLCCSKKHLYQ---IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
+ LK C K L Q +HA I S ++D + L+ S L AR +
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS--LEEARKVFEKMP 122
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
+ W LI GY+ DRP +A+ F M R G P EFT V+KA A G
Sbjct: 123 QRDF-VTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGH 181
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ K G DS+V+ + L+ Y DA VFD + R+ VSWN +I
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
+A+ F M GF P + + AC+ G L GKWVH +I+ G L G
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
L+DMYAK G++ AR +F R+ + +V +W++++ AQHG+ +EA+ F M+ I P
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 361
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
N ++FL VL AC+H+G++++G+ Y+ E+ GI P HY T+ D+L RAG L A F
Sbjct: 362 NEISFLSVLTACSHSGLLDEGWHYY-ELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRF 420
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
I MP +P + +ALL+A +H +G + EL+P VI+ N YA
Sbjct: 421 IEEMPIEPTAAIWKALLNACRMHK---NTELGAYAAEHVFELDPDDPGPHVILYNIYASG 477
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHM 509
G W + VR+ MK G+KK SWVE+ +IH F + + + I + E + +
Sbjct: 478 GRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKI 537
Query: 510 KVLNF 514
K L +
Sbjct: 538 KELGY 542
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 148/306 (48%), Gaps = 8/306 (2%)
Query: 119 DMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCR 178
D++ I Y +LK C L +G V A++ +S D+ N L+ Y C
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 179 RKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
+A KVF+ M +R V+W +I+ ++ +A+ +F +M G+ P+E T+ V+
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
A G +H ++ G N +G+AL+D+Y + G + A+L+F +E N +
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
W+A+I G A+ E+ALELF M P++ ++ + AC+ G +E G ++ H
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG-KWVHAYM 288
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQD 418
G K + +T+ D+ A++G + +A + + R ++S +S+ A Q
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIF-------DRLAKRDVVSWNSLLTAYAQH 341
Query: 419 GVGNEV 424
G G E
Sbjct: 342 GFGKEA 347
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 257 bits (656), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 155/459 (33%), Positives = 229/459 (49%), Gaps = 9/459 (1%)
Query: 33 SFLKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYV 89
S LK C L QIH+QI + Q +A + L+ + L A IL +
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDM--YAKLGKLDTAWDILIRFA 552
Query: 90 NDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGM 149
V + W +I GY + +A+ F M RGI+ E + ACA + L EG
Sbjct: 553 GKDV-VSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQ 611
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
Q+ A SG SD+ N LV Y C + ++ F+ ++WN +++ ++
Sbjct: 612 QIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSG 671
Query: 210 WLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGT 269
EA+ FV+M G + + T + A +E N+ GK VH + + G ++
Sbjct: 672 NNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCN 731
Query: 270 ALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISP 329
ALI MYAKCG++ A F + N +W+A+I ++HG+ EAL+ F M +S++ P
Sbjct: 732 ALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRP 791
Query: 330 NYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTF 389
N+VT +GVL AC+H G+V+ G YF M +G+ P HY + D+L RAG L A F
Sbjct: 792 NHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEF 851
Query: 390 IMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEV 449
I MP +P+ +V R LLSA +H +G LLELEP S V+++N YA
Sbjct: 852 IQEMPIKPDALVWRTLLSACVVHKNM---EIGEFAAHHLLELEPEDSATYVLLSNLYAVS 908
Query: 450 GMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG 488
W+ R+ MK G+KK G SW+E+ SIH FY G
Sbjct: 909 KKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVG 947
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 162/357 (45%), Gaps = 26/357 (7%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPI----PWNNLI 101
QIHA+I GL++ + L+ + + +L AR + D + + W +I
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDL--ARRVF-----DGLRLKDHSSWVAMI 260
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
G + ++ EA+ +F DM GI PT + + VL AC +I L G Q+ V K G
Sbjct: 261 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 320
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
SD Y N LV Y A +F +M +R V++N +I + + +A+ F +M
Sbjct: 321 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
G EPD T+ ++ AC+ G L G+ +H + G N ++ AL+++YAKC +
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADI 440
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
A F E NV W+ M++ + +F M+ I PN T+ +L C
Sbjct: 441 ETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 500
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYH-------TMADILARAGHLKEAYTFIM 391
G +E G E +H + ++ ++ + D+ A+ G L A+ ++
Sbjct: 501 IRLGDLELG-------EQIHS-QIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILI 549
Score = 122 bits (305), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 145/330 (43%), Gaps = 8/330 (2%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN ++ Y D R + +F M+ I P ++TYP +LK C + L G Q+ +
Sbjct: 456 VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQ 515
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ K+ + Y + L+ Y + A + + VVSW +I + + +A
Sbjct: 516 IIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKA 575
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M D G DE + +SAC L L G+ +H Q G + AL+ +
Sbjct: 576 LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 635
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y++CG + + L F + E + W+A++ G Q G EEAL +F M I N TF
Sbjct: 636 YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 695
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ A + ++ G + H + G + + + A+ G + +A + +
Sbjct: 696 GSAVKAASETANMKQG-KQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVS 754
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEV 424
+ N + A+++A S H G G+E
Sbjct: 755 TK-NEVSWNAIINAYSKH------GFGSEA 777
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 37/327 (11%)
Query: 120 MKRRGIKPTEFTYPFVLKACAEISG-LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCR 178
++ RGI+P T ++L+ C + +G L+EG ++ + + K GLDS+ + L FY
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134
Query: 179 RKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
A KVFD+M ER++ +WN +I +GE G FV+M P+E T VL
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 239 ACTELGNLSLG--KWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINV 296
AC G+++ + +H +++ +G + + LID+Y++ G V AR +F + +
Sbjct: 195 ACRG-GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 297 WTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYR---- 352
+W AMI GL+++ EA+ LF +M I P F VL AC +E G +
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 353 -------------------YFH-----EMEHVHGIKPMR--IHYHTMADILARAGHLKEA 386
YFH EH+ R + Y+T+ + L++ G+ ++A
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 387 YTFIMNM---PFQPNPIVLRALLSASS 410
M +P+ L +L+ A S
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACS 400
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 142/306 (46%), Gaps = 4/306 (1%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYA 105
++H+QI GL ++ + ++L F K Y + + + + WN +I+ A
Sbjct: 106 KLHSQILKLGLDSNGCLSEKLFDFYLF---KGDLYGAFKVFDEMPERTIFTWNKMIKELA 162
Query: 106 WSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS-GLNEGMQVQANVTKSGLDSDV 164
+ E +F+ M + P E T+ VL+AC S + Q+ A + GL
Sbjct: 163 SRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDST 222
Query: 165 YTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDL 224
N L+ Y A +VFD + + SW +I+ +N EA+ F M L
Sbjct: 223 VVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVL 282
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCA 284
G P VLSAC ++ +L +G+ +H +++ G + + AL+ +Y G + A
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 342
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHA 344
+FS M + + T++ +I GL+Q GY E+A+ELF M + P+ T ++ AC+
Sbjct: 343 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD 402
Query: 345 GMVEDG 350
G + G
Sbjct: 403 GTLFRG 408
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 257 bits (656), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 222/416 (53%), Gaps = 3/416 (0%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ +N +I GYA S +A+ + +M +KP FT VL +E + +G ++
Sbjct: 208 VSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGY 267
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
V + G+DSDVY ++LV Y R D+ +VF + R +SWN ++ V+N EA
Sbjct: 268 VIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEA 327
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F +M +P V+ AC L L LGK +H ++ G N + +AL+DM
Sbjct: 328 LRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDM 387
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y+KCG + AR +F RM ++ +W+A+I+G A HG+ EA+ LF MK + PN V F
Sbjct: 388 YSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAF 447
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ VL AC+H G+V++ + YF+ M V+G+ HY +AD+L RAG L+EAY FI M
Sbjct: 448 VAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMC 507
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
+P V LLS+ S+H + +V ++ ++ V++ N YA G W++
Sbjct: 508 VEPTGSVWSTLLSSCSVHK---NLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKE 564
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMK 510
++ +R M+ GL+K SW+E+ H F SG S + I + L+ + M+
Sbjct: 565 MAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQME 620
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 145/328 (44%), Gaps = 37/328 (11%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W ++IR + +A+ F++M+ G P +P VLK+C + L G V
Sbjct: 71 LAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGF 130
Query: 155 VTKSGLDSDVYTNNNLVRFY--------------------------GSCRRKRDAC---- 184
+ + G+D D+YT N L+ Y G K + C
Sbjct: 131 IVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPF 190
Query: 185 ------KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
+VF+ M + VVS+N II ++ +A+ +M +PD T+ VL
Sbjct: 191 GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP 250
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
+E ++ GK +H +I +G + +G++L+DMYAK + + +FSR+ + +
Sbjct: 251 IFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS 310
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
W++++ G Q+G EAL LF M + + P V F V+ AC H + G + H
Sbjct: 311 WNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLG-KQLHGYV 369
Query: 359 HVHGIKPMRIHYHTMADILARAGHLKEA 386
G + D+ ++ G++K A
Sbjct: 370 LRGGFGSNIFIASALVDMYSKCGNIKAA 397
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 36/188 (19%)
Query: 187 FDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNL 246
F + V++W +I + +A+ FV+M+ G PD VL +CT + +L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 247 SLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVG------------------------ 282
G+ VH ++ G + G AL++MYAK +G
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 283 ------------CARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPN 330
R +F M +V +++ +I G AQ G E+AL + M + + P+
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 331 YVTFLGVL 338
T VL
Sbjct: 242 SFTLSSVL 249
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 91/242 (37%), Gaps = 32/242 (13%)
Query: 241 TELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWS 300
T + + S K +H Q I R L+ + +I +Y + A LLF ++ V W
Sbjct: 16 TRIKSKSQAKQLHAQFI-RTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWK 74
Query: 301 AMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHV 360
++I +AL F M+ S P++ F VL +C + G E V
Sbjct: 75 SVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFG-------ESV 127
Query: 361 HGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP--------FQPNPIVLRALLSASSIH 412
HG I M L L Y ++ M F P S S
Sbjct: 128 HGF----IVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMP----QRTSNSGDE 179
Query: 413 DAKYQDGV---GNEVRRRLLELEPRG---SQNLVIVANKYAEVGMWEKVSNVRRFMKNVG 466
D K + + G + RR+ E+ PR S N +I YA+ GM+E + R M
Sbjct: 180 DVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAG--YAQSGMYEDALRMVREMGTTD 237
Query: 467 LK 468
LK
Sbjct: 238 LK 239
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 257 bits (656), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/416 (34%), Positives = 223/416 (53%), Gaps = 9/416 (2%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACA--EISGLNEGMQVQ 152
+PW+ +I + + EAV +FI M+ + P EFT +L CA + SGL E Q+
Sbjct: 314 VPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGE--QLH 371
Query: 153 ANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLG 212
V K G D D+Y +N L+ Y C + A K+F ++ ++ VSWN +I V ENL G
Sbjct: 372 GLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVI-VGYENLGEG 430
Query: 213 -EAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTAL 271
+A F + E T L AC L ++ LG VH I+ + +L
Sbjct: 431 GKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSL 490
Query: 272 IDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNY 331
IDMYAKCG + A+ +F+ ME I+V +W+A+I G + HG +AL + MK+ PN
Sbjct: 491 IDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNG 550
Query: 332 VTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIM 391
+TFLGVL C++AG+++ G F M HGI+P HY M +L R+G L +A I
Sbjct: 551 LTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIE 610
Query: 392 NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGM 451
+P++P+ ++ RA+LSAS + + +L++ P+ V+V+N YA
Sbjct: 611 GIPYEPSVMIWRAMLSASMNQN---NEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQ 667
Query: 452 WEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNL 507
W V+++R+ MK +G+KK G+SW+E G +H F G ++ I +LE LN+
Sbjct: 668 WANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNM 723
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 184/408 (45%), Gaps = 20/408 (4%)
Query: 33 SFLKLCCS--KKHLYQ-IHAQIQVSGLQNDAQILKELVRFCTLSSSKN--LTYARSILCN 87
SFLKL S K + +H+ I G ++A + L+ ++ S + T ILC
Sbjct: 151 SFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCK 210
Query: 88 YVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNE 147
+ + W ++ Y + +++ + M+ G P +T+ LKA + +
Sbjct: 211 DI-----VVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDF 265
Query: 148 GMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVE 207
V + K+ D L++ Y DA KVF++M + VV W+ +I +
Sbjct: 266 AKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQ 325
Query: 208 NLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLS-LGKWVHLQLIERGTVLNCQ 266
N + EAV F++M++ P+E T+ +L+ C +G S LG+ +H +++ G L+
Sbjct: 326 NGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA-IGKCSGLGEQLHGLVVKVGFDLDIY 384
Query: 267 LGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS 326
+ ALID+YAKC + A LF+ + N +W+ +I+G G +A +F +
Sbjct: 385 VSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQ 444
Query: 327 ISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+S VTF L AC ++ G + + K + + +++ D+ A+ G +K A
Sbjct: 445 VSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVS-NSLIDMYAKCGDIKFA 503
Query: 387 YTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPR 434
+ M + AL+S S H G+G + R L ++ R
Sbjct: 504 QSVFNEME-TIDVASWNALISGYSTH------GLGRQALRILDIMKDR 544
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 4/247 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ + L +GYA D + ++ + R G + + LK + + +
Sbjct: 116 VSFVTLAQGYACQD----PIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSP 171
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
+ K G DS+ + L+ Y C A VF+ + + +V W I++ VEN + ++
Sbjct: 172 IVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDS 231
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ M+ GF P+ T L A LG K VH Q+++ VL+ ++G L+ +
Sbjct: 232 LKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQL 291
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y + G + A +F+ M + +V WS MI Q+G+ EA++LF M+ + + PN T
Sbjct: 292 YTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTL 351
Query: 335 LGVLCAC 341
+L C
Sbjct: 352 SSILNGC 358
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 4/204 (1%)
Query: 131 TYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDM 190
Y +L+ C + + + ++ K G D++ N L+ Y +DA +FD+M
Sbjct: 51 AYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEM 110
Query: 191 CERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGK 250
ER+ NV + + +G + ++ G E + L L +
Sbjct: 111 PERN----NVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICP 166
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
W+H +++ G N +G ALI+ Y+ CG+V AR +F + ++ W+ ++ ++G
Sbjct: 167 WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENG 226
Query: 311 YAEEALELFSNMKNSSISPNYVTF 334
Y E++L+L S M+ + PN TF
Sbjct: 227 YFEDSLKLLSCMRMAGFMPNNYTF 250
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 256 bits (654), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 158/495 (31%), Positives = 251/495 (50%), Gaps = 16/495 (3%)
Query: 26 SKARQCLSFLKLCCSKK----HLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYA 81
S ++Q L LCC + ++H I +G D + +L+ S ++ YA
Sbjct: 74 SPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGM--YSDLGSVDYA 131
Query: 82 RSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAE 141
R + ++ + WN L R + E + ++ M R G++ FTY +VLKAC
Sbjct: 132 RKVFDKTRKRTIYV-WNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVA 190
Query: 142 ----ISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVS 197
++ L +G ++ A++T+ G S VY LV Y A VF M R+VVS
Sbjct: 191 SECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVS 250
Query: 198 WNVIITVCVENLWLGEAVGYFVKM--KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQ 255
W+ +I +N EA+ F +M + P+ TM+ VL AC L L GK +H
Sbjct: 251 WSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGY 310
Query: 256 LIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEA 315
++ RG + +AL+ MY +CG + + +F RM + +V +W+++I HGY ++A
Sbjct: 311 ILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKA 370
Query: 316 LELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMAD 375
+++F M + SP VTF+ VL AC+H G+VE+G R F M HGIKP HY M D
Sbjct: 371 IQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVD 430
Query: 376 ILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRG 435
+L RA L EA + +M +P P V +LL + IH + RRL LEP+
Sbjct: 431 LLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG---NVELAERASRRLFALEPKN 487
Query: 436 SQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVEL 495
+ N V++A+ YAE MW++V V++ +++ GL+K+ G W+E+ ++ F S + +
Sbjct: 488 AGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLM 547
Query: 496 AGIYQILETLNLHMK 510
I+ L L MK
Sbjct: 548 EQIHAFLVKLAEDMK 562
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 256 bits (653), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 154/505 (30%), Positives = 247/505 (48%), Gaps = 33/505 (6%)
Query: 32 LSFLKLCCSKKHLY---QIHAQIQVSGLQN----DAQILKELVRFCTLSSSKNLTYARS- 83
++ LKL S H+ QIH Q+ G ++ + +L +S +K + Y
Sbjct: 143 MTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDD 202
Query: 84 -------------ILCNYVNDSV---------PIPWNNLIRGYAWSDRPREAVWVFIDMK 121
+ C + D++ + W +I+G A + +EA+ F +MK
Sbjct: 203 RNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 122 RRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKR 181
+G+K ++ + VL AC + +NEG Q+ A + ++ +Y + L+ Y C+
Sbjct: 263 VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLH 322
Query: 182 DACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACT 241
A VFD M +++VVSW ++ + EAV F+ M+ G +PD T+ +SAC
Sbjct: 323 YAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACA 382
Query: 242 ELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSA 301
+ +L G H + I G + + +L+ +Y KCG + + LF+ M + +W+A
Sbjct: 383 NVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTA 442
Query: 302 MILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVH 361
M+ AQ G A E ++LF M + P+ VT GV+ AC+ AG+VE G RYF M +
Sbjct: 443 MVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEY 502
Query: 362 GIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVG 421
GI P HY M D+ +R+G L+EA FI MPF P+ I LLSA K +G
Sbjct: 503 GIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACR---NKGNLEIG 559
Query: 422 NEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGS 481
L+EL+P ++++ YA G W+ V+ +RR M+ +KK G SW++ G
Sbjct: 560 KWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGK 619
Query: 482 IHRFYSGYDSQVELAGIYQILETLN 506
+H F + +S L IY LE LN
Sbjct: 620 LHSFSADDESSPYLDQIYAKLEELN 644
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 150/319 (47%), Gaps = 38/319 (11%)
Query: 91 DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRR-GIKPTEFTYPFVLKACAEISGLNEGM 149
D + WN LI GY+ S AV + M R T T +LK + ++ G
Sbjct: 100 DRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGK 159
Query: 150 QVQANVTKSGLDSDVYTNNNLVR--------------FYG-----------------SCR 178
Q+ V K G +S + + L+ FYG +C
Sbjct: 160 QIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACG 219
Query: 179 RKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLS 238
DA ++F M E+ VSW +I +N EA+ F +MK G + D+ VL
Sbjct: 220 MIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLP 278
Query: 239 ACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWT 298
AC LG ++ GK +H +I + +G+ALIDMY KC + A+ +F RM++ NV +
Sbjct: 279 ACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVS 338
Query: 299 WSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEME 358
W+AM++G Q G AEEA+++F +M+ S I P++ T + AC + +E+G ++
Sbjct: 339 WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQF----- 393
Query: 359 HVHGIKPMRIHYHTMADIL 377
H I IHY T+++ L
Sbjct: 394 HGKAITSGLIHYVTVSNSL 412
Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 113/256 (44%), Gaps = 37/256 (14%)
Query: 127 PTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKV 186
P F Y ++ A A + +V + + L ++ NNL+ Y +
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARRVFDRIPQPNL----FSWNNLLLAYSKAGLISEMEST 94
Query: 187 FDDMCERSVVSWNVIITVCVENLWLGEAV-GYFVKMKDLGFEPDETTMLVVLSACTELGN 245
F+ + +R V+WNV+I + +G AV Y M+D T++ +L + G+
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154
Query: 246 LSLGKWVHLQLIERGTVLNCQLGTALIDMYAK---------------------------- 277
+SLGK +H Q+I+ G +G+ L+ MYA
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 278 ---CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
CG + A LF ME+ +V +W+AMI GLAQ+G A+EA+E F MK + + F
Sbjct: 215 LLACGMIEDALQLFRGMEKDSV-SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPF 273
Query: 335 LGVLCACNHAGMVEDG 350
VL AC G + +G
Sbjct: 274 GSVLPACGGLGAINEG 289
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 255 bits (651), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 161/498 (32%), Positives = 256/498 (51%), Gaps = 42/498 (8%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKN-----LTYARSILC 86
L+ L+ C S L IH + + L +D + L+ C S+ N L YA I
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
N ++ + +N LIR ++ P +A + M + I P T+PF++KA +E+ +
Sbjct: 76 QIQNPNLFV-FNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVL 134
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSC------------RRKRDA----------C 184
G Q + + + G +DVY N+LV Y +C RD C
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 194
Query: 185 K---------VFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLV 235
K +FD+M R++ +W+++I +N +A+ F MK G +ET M+
Sbjct: 195 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254
Query: 236 VLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEIN 295
V+S+C LG L G+ + +++ +N LGTAL+DM+ +CG + A +F + E +
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETD 314
Query: 296 VWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFH 355
+WS++I GLA HG+A +A+ FS M + P VTF VL AC+H G+VE G +
Sbjct: 315 SLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYE 374
Query: 356 EMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH-DA 414
M+ HGI+P HY + D+L RAG L EA FI+ M +PN +L ALL A I+ +
Sbjct: 375 NMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNT 434
Query: 415 KYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMS 474
+ + VGN L++++P S V+++N YA G W+K+ ++R MK +KK G S
Sbjct: 435 EVAERVGN----MLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWS 490
Query: 475 WVELGGSIHRFYSGYDSQ 492
+E+ G I++F G D +
Sbjct: 491 LIEIDGKINKFTMGDDQK 508
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 254 bits (650), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 140/467 (29%), Positives = 245/467 (52%), Gaps = 6/467 (1%)
Query: 48 HAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWS 107
H +I L+ D +L L+ S + AR + + S+ + WN +I Y +
Sbjct: 84 HGKIIRIDLEGDVTLLNVLIN--AYSKCGFVELARQVFDGMLERSL-VSWNTMIGLYTRN 140
Query: 108 DRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTN 167
EA+ +F++M+ G K +EFT VL AC E ++ K+ +D ++Y
Sbjct: 141 RMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVG 200
Query: 168 NNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFE 227
L+ Y C +DA +VF+ M ++S V+W+ ++ V+N EA+ + + + + E
Sbjct: 201 TALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE 260
Query: 228 PDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLL 287
++ T+ V+ AC+ L L GK +H + + G N + ++ +DMYAKCG++ + ++
Sbjct: 261 QNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYII 320
Query: 288 FSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMV 347
FS ++E N+ W+ +I G A+H +E + LF M+ + PN VTF +L C H G+V
Sbjct: 321 FSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 380
Query: 348 EDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLS 407
E+G R+F M +G+ P +HY M DIL RAG L EAY I ++PF P + +LL+
Sbjct: 381 EEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 440
Query: 408 ASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGL 467
+ ++ V E +L ELEP + N V+++N YA WE+++ R+ +++ +
Sbjct: 441 SCRVYKNLELAEVAAE---KLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDV 497
Query: 468 KKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
KK++G SW+++ +H F G + I L+ L + + +
Sbjct: 498 KKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGY 544
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 130/253 (51%), Gaps = 1/253 (0%)
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
+L+ CA + E + + L+ DV N L+ Y C A +VFD M ERS
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHL 254
+VSWN +I + N EA+ F++M++ GF+ E T+ VLSAC + K +H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 255 QLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEE 314
++ LN +GTAL+D+YAKCG + A +F M++ + TWS+M+ G Q+ EE
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 315 ALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMA 374
AL L+ + S+ N T V+CAC++ + +G + H + G +
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEG-KQMHAVICKSGFGSNVFVASSAV 305
Query: 375 DILARAGHLKEAY 387
D+ A+ G L+E+Y
Sbjct: 306 DMYAKCGSLRESY 318
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 253 bits (647), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/447 (32%), Positives = 233/447 (52%), Gaps = 34/447 (7%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ WN LI GY +A++V+ M+ G+KP + T ++ +C+ + LN G +
Sbjct: 223 VSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY 282
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT----------- 203
V ++GL + N L+ + C +A ++FD++ +R++VSW +I+
Sbjct: 283 VKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVS 342
Query: 204 -----------VCVENLWLG---------EAVGYFVKMKDLGFEPDETTMLVVLSACTEL 243
V + N +G +A+ F +M+ +PDE TM+ LSAC++L
Sbjct: 343 RKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQL 402
Query: 244 GNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMI 303
G L +G W+H + + LN LGT+L+DMYAKCG + A +F ++ N T++A+I
Sbjct: 403 GALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAII 462
Query: 304 LGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGI 363
GLA HG A A+ F+ M ++ I+P+ +TF+G+L AC H GM++ G YF +M+ +
Sbjct: 463 GGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNL 522
Query: 364 KPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNE 423
P HY M D+L RAG L+EA + +MP + + V ALL +H +G +
Sbjct: 523 NPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHG---NVELGEK 579
Query: 424 VRRRLLELEPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIH 483
++LLEL+P S V++ Y E MWE RR M G++K+ G S +E+ G +
Sbjct: 580 AAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVC 639
Query: 484 RFYSGYDSQVELAGIYQILETLNLHMK 510
F S+ E IY L L HM+
Sbjct: 640 EFIVRDKSRPESEKIYDRLHCLGRHMR 666
Score = 179 bits (453), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 203/415 (48%), Gaps = 37/415 (8%)
Query: 32 LSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
LS L+ C HL QI AQ+ ++GL D L+ FC LS S+ L Y+ IL N
Sbjct: 57 LSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENP 116
Query: 92 SVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGI---KPTEFTYPFVLKACAEISGLNEG 148
++ WN IRG++ S+ P+E+ ++ M R G +P FTYP + K CA++ + G
Sbjct: 117 NI-FSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175
Query: 149 MQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVEN 208
+ +V K L+ + +N + + SC +A KVFD+ R +VSWN +I +
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKI 235
Query: 209 LWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLG 268
+A+ + M+ G +PD+ TM+ ++S+C+ LG+L+ GK + + E G + L
Sbjct: 236 GEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV 295
Query: 269 TALIDM-------------------------------YAKCGAVGCARLLFSRMEEINVW 297
AL+DM YA+CG + +R LF MEE +V
Sbjct: 296 NALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 355
Query: 298 TWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEM 357
W+AMI G Q ++AL LF M+ S+ P+ +T + L AC+ G ++ G + H
Sbjct: 356 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGI-WIHRY 414
Query: 358 EHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIH 412
+ + ++ D+ A+ G++ EA + + + N + A++ ++H
Sbjct: 415 IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALH 468
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 253 bits (647), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/420 (34%), Positives = 220/420 (52%), Gaps = 5/420 (1%)
Query: 97 WNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVT 156
WN I RPREA+ FI+ +R P T+ L AC++ LN GMQ+ V
Sbjct: 177 WNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVL 236
Query: 157 KSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVG 216
+SG D+DV N L+ FYG C++ R + +F +M ++ VSW ++ V+N +A
Sbjct: 237 RSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASV 296
Query: 217 YFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYA 276
+++ + E + + VLSAC + L LG+ +H ++ +G+AL+DMY
Sbjct: 297 LYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYG 356
Query: 277 KCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNM--KNSSISPNYVTF 334
KCG + + F M E N+ T +++I G A G + AL LF M + +PNY+TF
Sbjct: 357 KCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTF 416
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMP 394
+ +L AC+ AG VE+G + F M +GI+P HY + D+L RAG ++ AY FI MP
Sbjct: 417 VSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMP 476
Query: 395 FQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGSQNLVIVANKYAEVGMWEK 454
QP V AL +A +H K Q +G L +L+P+ S N V+++N +A G W +
Sbjct: 477 IQPTISVWGALQNACRMH-GKPQ--LGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAE 533
Query: 455 VSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILETLNLHMKVLNF 514
+ VR +K VG+KK G SW+ + +H F + S + I L L M+ +
Sbjct: 534 ANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGY 593
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 128/270 (47%), Gaps = 5/270 (1%)
Query: 95 IPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQAN 154
+ W +LI G A + A+ F +M+R G+ P +FT+P KA A + G Q+ A
Sbjct: 74 VSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHAL 133
Query: 155 VTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEA 214
K G DV+ + Y R + DA K+FD++ ER++ +WN I+ V + EA
Sbjct: 134 AVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREA 193
Query: 215 VGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDM 274
+ F++ + + P+ T L+AC++ +L+LG +H ++ G + + LID
Sbjct: 194 IEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDF 253
Query: 275 YAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTF 334
Y KC + + ++F+ M N +W +++ Q+ E+A L+ + + +
Sbjct: 254 YGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMI 313
Query: 335 LGVLCACNHAGMVEDGYRYFHEMEHVHGIK 364
VL AC +E G H H +K
Sbjct: 314 SSVLSACAGMAGLELGRSI-----HAHAVK 338
Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 130/300 (43%), Gaps = 16/300 (5%)
Query: 33 SFLKLCCSKKHL---YQIHAQIQVSGLQNDAQILKELVRF---CTLSSSKNLTYARSILC 86
+FL C HL Q+H + SG D + L+ F C S + +
Sbjct: 214 AFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK 273
Query: 87 NYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLN 146
N V+ W +L+ Y + +A +++ ++ ++ ++F VL ACA ++GL
Sbjct: 274 NAVS------WCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLE 327
Query: 147 EGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCV 206
G + A+ K+ ++ ++ + LV YG C D+ + FD+M E+++V+ N +I
Sbjct: 328 LGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYA 387
Query: 207 ENLWLGEAVGYFVKM--KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIER-GTVL 263
+ A+ F +M + G P+ T + +LSAC+ G + G + + G
Sbjct: 388 HQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEP 447
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRME-EINVWTWSAMILGLAQHGYAEEALELFSNM 322
+ + ++DM + G V A +M + + W A+ HG + L N+
Sbjct: 448 GAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENL 507
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 91/211 (43%), Gaps = 3/211 (1%)
Query: 134 FVLKACAEISGLNEGMQVQANVTKSGLDSDV--YTNNNLVRFYGSCRRKRDACKVFDDMC 191
+LK S + G V A + K+ LDS + N L+ Y A V
Sbjct: 11 LLLKNAISASSMRLGRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARLVLRLTP 69
Query: 192 ERSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKW 251
R+VVSW +I+ +N A+ F +M+ G P++ T A L GK
Sbjct: 70 ARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQ 129
Query: 252 VHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGY 311
+H ++ G +L+ +G + DMY K AR LF + E N+ TW+A I G
Sbjct: 130 IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR 189
Query: 312 AEEALELFSNMKNSSISPNYVTFLGVLCACN 342
EA+E F + PN +TF L AC+
Sbjct: 190 PREAIEAFIEFRRIDGHPNSITFCAFLNACS 220
>sp|Q9FND6|PP411_ARATH Pentatricopeptide repeat-containing protein At5g40410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2
SV=1
Length = 608
Score = 252 bits (644), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 229/427 (53%), Gaps = 11/427 (2%)
Query: 91 DSVP----IPWNNLIRGYAWSDRPREAVWVFIDM--KRRGIKPTEFTYPFVLKACAEISG 144
D +P + WN+LI GY+ + V M G +P E T+ ++ AC
Sbjct: 90 DEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGS 149
Query: 145 LNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITV 204
EG + V K G+ +V N + +YG +CK+F+D+ +++VSWN +I +
Sbjct: 150 KEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVI 209
Query: 205 CVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLN 264
++N + + YF + +G EPD+ T L VL +C ++G + L + +H ++ G N
Sbjct: 210 HLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGN 269
Query: 265 CQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKN 324
+ TAL+D+Y+K G + + +F + + W+AM+ A HG+ +A++ F M +
Sbjct: 270 KCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVH 329
Query: 325 SSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLK 384
ISP++VTF +L AC+H+G+VE+G YF M + I P HY M D+L R+G L+
Sbjct: 330 YGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQ 389
Query: 385 EAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDG-VGNEVRRRLLELEPRGSQNLVIVA 443
+AY I MP +P+ V ALL A + Y+D +G + RL ELEPR +N V+++
Sbjct: 390 DAYGLIKEMPMEPSSGVWGALLGACRV----YKDTQLGTKAAERLFELEPRDGRNYVMLS 445
Query: 444 NKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELAGIYQILE 503
N Y+ G+W+ S +R MK GL + G S++E G IH+F G S E I + L+
Sbjct: 446 NIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLK 505
Query: 504 TLNLHMK 510
+ MK
Sbjct: 506 EIRKKMK 512
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 142/302 (47%), Gaps = 14/302 (4%)
Query: 121 KRRGIKPTEFTYPFVLKACAEISGLNEGMQVQ------ANVTKSGLDSDVYTNNNLVRFY 174
+RR + + F + + I+ + + ++ V KS + + LV Y
Sbjct: 17 RRRFLSQSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCY 76
Query: 175 GSCRRKRDAC--KVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM--KDLGFEPDE 230
R D C K+FD+M ER +VSWN +I+ +LG+ +M ++GF P+E
Sbjct: 77 --LRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNE 134
Query: 231 TTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSR 290
T L ++SAC G+ G+ +H +++ G + ++ A I+ Y K G + + LF
Sbjct: 135 VTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFED 194
Query: 291 MEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDG 350
+ N+ +W+ MI+ Q+G AE+ L F+ + P+ TFL VL +C G+V
Sbjct: 195 LSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLA 254
Query: 351 YRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSASS 410
+ H + G + + D+ ++ G L+++ T + P+ + A+L+A +
Sbjct: 255 -QGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEIT-SPDSMAWTAMLAAYA 312
Query: 411 IH 412
H
Sbjct: 313 TH 314
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 251 bits (641), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/447 (31%), Positives = 227/447 (50%), Gaps = 15/447 (3%)
Query: 46 QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVP----IPWNNLI 101
Q+HA +G DA + +++ F + + R + + D +P + +N +I
Sbjct: 271 QLHALSVTTGFSRDASVGNQILDFYS-------KHDRVLETRMLFDEMPELDFVSYNVVI 323
Query: 102 RGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLD 161
Y+ +D+ ++ F +M+ G F + +L A +S L G Q+ + D
Sbjct: 324 SSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATAD 383
Query: 162 SDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM 221
S ++ N+LV Y C +A +F + +R+ VSW +I+ V+ G + F KM
Sbjct: 384 SILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKM 443
Query: 222 KDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAV 281
+ D++T VL A +L LGK +H +I G + N G+ L+DMYAKCG++
Sbjct: 444 RGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSI 503
Query: 282 GCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCAC 341
A +F M + N +W+A+I A +G E A+ F+ M S + P+ V+ LGVL AC
Sbjct: 504 KDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTAC 563
Query: 342 NHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEAYTFIMNMPFQPNPIV 401
+H G VE G YF M ++GI P + HY M D+L R G EA + MPF+P+ I+
Sbjct: 564 SHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIM 623
Query: 402 LRALLSASSIHDAKYQDGVGNEVRRRLLELEP-RGSQNLVIVANKYAEVGMWEKVSNVRR 460
++L+A IH + + +L +E R + V ++N YA G WEKV +V++
Sbjct: 624 WSSVLNACRIHKNQ---SLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKK 680
Query: 461 FMKNVGLKKMKGMSWVELGGSIHRFYS 487
M+ G+KK+ SWVE+ IH F S
Sbjct: 681 AMRERGIKKVPAYSWVEVNHKIHVFSS 707
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 152/325 (46%), Gaps = 2/325 (0%)
Query: 84 ILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVLKACAEIS 143
+L + + + +N LI GY E++ +F+ M++ G +P++FT+ VLKA +
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264
Query: 144 GLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIIT 203
G Q+ A +G D N ++ FY R + +FD+M E VS+NV+I+
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVIS 324
Query: 204 VCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVL 263
+ ++ +F +M+ +GF+ +LS L +L +G+ +H Q +
Sbjct: 325 SYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADS 384
Query: 264 NCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMK 323
+G +L+DMYAKC A L+F + + +W+A+I G Q G L+LF+ M+
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444
Query: 324 NSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADILARAGHL 383
S++ + TF VL A + G + H G + D+ A+ G +
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLG-KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSI 503
Query: 384 KEAYTFIMNMPFQPNPIVLRALLSA 408
K+A MP N + AL+SA
Sbjct: 504 KDAVQVFEEMP-DRNAVSWNALISA 527
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 152/336 (45%), Gaps = 7/336 (2%)
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRG--IKPTEFTYPF 134
+++ AR + + + D + W L+ YA + EA +F M R P T+
Sbjct: 94 DVSSARDLF-DAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVY--TNNNLVRFYGSCRRKRDACKVFDDMCE 192
+L C + N QV A K G D++ + +N L++ Y RR AC +F+++ E
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 193 RSVVSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWV 252
+ V++N +IT ++ E++ F+KM+ G +P + T VL A L + +LG+ +
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 253 HLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
H + G + +G ++D Y+K V R+LF M E++ +++ +I +Q
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQY 332
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
E +L F M+ F +L + ++ G R H + + ++
Sbjct: 333 EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMG-RQLHCQALLATADSILHVGNS 391
Query: 373 MADILARAGHLKEAYTFIMNMPFQPNPIVLRALLSA 408
+ D+ A+ +EA ++P Q + AL+S
Sbjct: 392 LVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALISG 426
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 35/226 (15%)
Query: 150 QVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENL 209
+V A + K+G D+D +N +V + A KV+D+M ++ VS N +I+ V+
Sbjct: 34 RVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTG 93
Query: 210 WLGEAVGYFVKMKD---------LG-------FE-----------------PDETTMLVV 236
+ A F M D +G F+ PD T +
Sbjct: 94 DVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTL 153
Query: 237 LSACTELGNLSLGKWVHLQLIERGTVLN--CQLGTALIDMYAKCGAVGCARLLFSRMEEI 294
L C + + VH ++ G N + L+ Y + + A +LF + E
Sbjct: 154 LPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK 213
Query: 295 NVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGVLCA 340
+ T++ +I G + G E++ LF M+ S P+ TF GVL A
Sbjct: 214 DSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
Query: 225 GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCA 284
GF+ D ++ G +S + V+ ++ + TV +I + K G V A
Sbjct: 43 GFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVST----NTMISGHVKTGDVSSA 98
Query: 285 RLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSS--ISPNYVTFLGVLCACN 342
R LF M + V TW+ ++ A++ + +EA +LF M SS P++VTF +L CN
Sbjct: 99 RDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCN 158
Query: 343 HA 344
A
Sbjct: 159 DA 160
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 250 bits (639), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/435 (33%), Positives = 244/435 (56%), Gaps = 16/435 (3%)
Query: 77 NLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFVL 136
+L+YA+ + + +V WN LI G+A S+ PR ++ + MK G+ P FT +L
Sbjct: 445 SLSYAQRVFHGIRSKTVN-SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 503
Query: 137 KACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVV 196
AC+++ L G +V + ++ L+ D++ +++ Y C +FD M ++S+V
Sbjct: 504 SACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLV 563
Query: 197 SWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHL-- 254
SWN +IT ++N + A+G F +M G + +M+ V AC+ L +L LG+ H
Sbjct: 564 SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 623
Query: 255 --QLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYA 312
L+E + C +LIDMYAK G++ + +F+ ++E + +W+AMI+G HG A
Sbjct: 624 LKHLLEDDAFIAC----SLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLA 679
Query: 313 EEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHT 372
+EA++LF M+ + +P+ +TFLGVL ACNH+G++ +G RY +M+ G+KP HY
Sbjct: 680 KEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYAC 739
Query: 373 MADILARAGHLKEAYTFIM-NMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLEL 431
+ D+L RAG L +A + M + + + ++LLS+ IH +G +V +L EL
Sbjct: 740 VIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLE---MGEKVAAKLFEL 796
Query: 432 EPRGSQNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSG--- 488
EP +N V+++N YA +G WE V VR+ M + L+K G SW+EL + F G
Sbjct: 797 EPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERF 856
Query: 489 YDSQVELAGIYQILE 503
D E+ ++ ILE
Sbjct: 857 LDGFEEIKSLWSILE 871
Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 158/335 (47%), Gaps = 15/335 (4%)
Query: 21 NSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQ--VSG---LQNDAQILKELVRFCTLSSS 75
+SD R+ L L K+ ++ +I VSG L+ND + ++ + S
Sbjct: 76 SSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGS 135
Query: 76 KNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFIDM-KRRGIKPTEFTYPF 134
+ + + + + WN +I Y+ ++ E + FI+M + P FTYP
Sbjct: 136 PDDS---RFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPC 192
Query: 135 VLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERS 194
V+KACA +S + G+ V V K+GL DV+ N LV FYG+ DA ++FD M ER+
Sbjct: 193 VIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERN 252
Query: 195 VVSWNVIITVCVENLWLGEAVGYFVKM----KDLGFEPDETTMLVVLSACTELGNLSLGK 250
+VSWN +I V +N + E+ +M D F PD T++ VL C + LGK
Sbjct: 253 LVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGK 312
Query: 251 WVHLQLIERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHG 310
VH ++ L AL+DMY+KCG + A+++F NV +W+ M+ G + G
Sbjct: 313 GVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG 372
Query: 311 YAEEALELFSNM--KNSSISPNYVTFLGVLCACNH 343
++ M + + VT L + C H
Sbjct: 373 DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 124/291 (42%), Gaps = 35/291 (12%)
Query: 48 HAQIQVSGLQNDAQILKELVRFCTLSSS-----------------KNLTYARSILCNYVN 90
H Q+++SGL D+ + L+ C+ S ++L S+L Y++
Sbjct: 484 HLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIH 543
Query: 91 ---------------DSVPIPWNNLIRGYAWSDRPREAVWVFIDMKRRGIKPTEFTYPFV 135
D + WN +I GY + P A+ VF M GI+ + V
Sbjct: 544 CGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 603
Query: 136 LKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDACKVFDDMCERSV 195
AC+ + L G + A K L+ D + +L+ Y + KVF+ + E+S
Sbjct: 604 FGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKST 663
Query: 196 VSWNVIITVCVENLWLGEAVGYFVKMKDLGFEPDETTMLVVLSACTELGNLSLG-KWVHL 254
SWN +I + EA+ F +M+ G PD+ T L VL+AC G + G +++
Sbjct: 664 ASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQ 723
Query: 255 QLIERGTVLNCQLGTALIDMYAKCGAVGCA-RLLFSRM-EEINVWTWSAMI 303
G N + +IDM + G + A R++ M EE +V W +++
Sbjct: 724 MKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLL 774
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 128/305 (41%), Gaps = 15/305 (4%)
Query: 47 IHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVNDSVPIPWNNLIRGYAW 106
+H + +GL D + LV F + L + + + + WN++IR ++
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSF---YGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 265
Query: 107 SDRPREAVWVFIDMKRR----GIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDS 162
+ E+ + +M P T VL CA + G V K LD
Sbjct: 266 NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK 325
Query: 163 DVYTNNNLVRFYGSCRRKRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKMK 222
++ NN L+ Y C +A +F ++VVSWN ++ G+ G F ++
Sbjct: 326 ELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAE---GDTHGTFDVLR 382
Query: 223 DL-----GFEPDETTMLVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAK 277
+ + DE T+L + C L K +H +++ V N + A + YAK
Sbjct: 383 QMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAK 442
Query: 278 CGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEALELFSNMKNSSISPNYVTFLGV 337
CG++ A+ +F + V +W+A+I G AQ +L+ MK S + P+ T +
Sbjct: 443 CGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSL 502
Query: 338 LCACN 342
L AC+
Sbjct: 503 LSACS 507
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 250 bits (638), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 165/490 (33%), Positives = 248/490 (50%), Gaps = 30/490 (6%)
Query: 35 LKLCCSKKHLY---QIHAQIQVSGLQNDAQILKELVRFCTLSSSKNLTYARSILCNYVND 91
+K C S ++ Q H Q V G Q+D + L+ S+ L AR + D
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALI--VMYSTCGKLEDARKVF-----D 135
Query: 92 SVP----IPWNNLIRGYAWSDRPREAVWVFIDM------KRRGIKPTEFTYPFVLKACAE 141
+P + W ++IRGY + +AV +F D+ + V+ AC+
Sbjct: 136 EIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSR 195
Query: 142 ISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRRKRDAC--KVFDDMCERSVVSWN 199
+ + + V K G D V N L+ Y A K+FD + ++ VS+N
Sbjct: 196 VPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYN 255
Query: 200 VIITVCVENLWLGEAVGYF---VKMKDLGFEPDETTMLVVLSACTELGNLSLGKWVHLQL 256
I++V ++ EA F VK K + F + T+ VL A + G L +GK +H Q+
Sbjct: 256 SIMSVYAQSGMSNEAFEVFRRLVKNKVVTF--NAITLSTVLLAVSHSGALRIGKCIHDQV 313
Query: 257 IERGTVLNCQLGTALIDMYAKCGAVGCARLLFSRMEEINVWTWSAMILGLAQHGYAEEAL 316
I G + +GT++IDMY KCG V AR F RM+ NV +W+AMI G HG+A +AL
Sbjct: 314 IRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKAL 373
Query: 317 ELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHVHGIKPMRIHYHTMADI 376
ELF M +S + PNY+TF+ VL AC+HAG+ +G+R+F+ M+ G++P HY M D+
Sbjct: 374 ELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDL 433
Query: 377 LARAGHLKEAYTFIMNMPFQPNPIVLRALLSASSIHDAKYQDGVGNEVRRRLLELEPRGS 436
L RAG L++AY I M +P+ I+ +LL+A IH + RL EL+
Sbjct: 434 LGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVA---RLFELDSSNC 490
Query: 437 QNLVIVANKYAEVGMWEKVSNVRRFMKNVGLKKMKGMSWVELGGSIHRFYSGYDSQVELA 496
+++++ YA+ G W+ V VR MKN GL K G S +EL G +H F G + +
Sbjct: 491 GYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQRE 550
Query: 497 GIYQILETLN 506
IY+ L LN
Sbjct: 551 KIYEFLAELN 560
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 166/336 (49%), Gaps = 22/336 (6%)
Query: 69 FCTLS---------SSKNLTYARSILCNYVNDSVPIPWNNLIRGYAWSDRPREAVWVFID 119
FC++S +NLT ++ YV+ + WN++I A S EA+ F
Sbjct: 10 FCSVSRLLHTERHTERQNLT---TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSS 66
Query: 120 MKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGLDSDVYTNNNLVRFYGSCRR 179
M++ + PT ++P +KAC+ + + G Q G SD++ ++ L+ Y +C +
Sbjct: 67 MRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGK 126
Query: 180 KRDACKVFDDMCERSVVSWNVIITVCVENLWLGEAVGYFVKM------KDLGFEPDETTM 233
DA KVFD++ +R++VSW +I N +AV F + D D +
Sbjct: 127 LEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGL 186
Query: 234 LVVLSACTELGNLSLGKWVHLQLIERGTVLNCQLGTALIDMYAKC--GAVGCARLLFSRM 291
+ V+SAC+ + L + +H +I+RG +G L+D YAK G V AR +F ++
Sbjct: 187 VSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI 246
Query: 292 EEINVWTWSAMILGLAQHGYAEEALELFSNM-KNSSISPNYVTFLGVLCACNHAGMVEDG 350
+ + ++++++ AQ G + EA E+F + KN ++ N +T VL A +H+G + G
Sbjct: 247 VDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIG 306
Query: 351 YRYFHEMEHVHGIKPMRIHYHTMADILARAGHLKEA 386
+ H+ G++ I ++ D+ + G ++ A
Sbjct: 307 -KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETA 341
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 190,915,848
Number of Sequences: 539616
Number of extensions: 7861748
Number of successful extensions: 22616
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 16981
Number of HSP's gapped (non-prelim): 1927
length of query: 514
length of database: 191,569,459
effective HSP length: 122
effective length of query: 392
effective length of database: 125,736,307
effective search space: 49288632344
effective search space used: 49288632344
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)