BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>046315
SSADISSQRTDVDVREEYAHAFRTESYNEFWTRVLALSNKDSAKSIQVESTTAARLSSYR
LFAEQLLDPDQSTVIRILDLVKTPSLIFDYFTQTANASLFFGPLLKDIDNVRIKYRSFKV
IVNSLQNAHALPINYVSSVVIRLTEFSNLSNPFASAAPTTRRFRVVQAGCGKLLKQLESS
RDKARARLQLINITKHGSATFLLAITISLTVIVASHALALLVAAPGLIAASLELASTRRL
VRVSTQLDAAAKGTYILNRDLDTISRLVARLNDELEHMRSTVKFWLDRGEVRLQASGEVA
RQLLKNDASFSQQLDELEEHLYLCFMTVNRARNLVMKEILDPGQSTTRDLNMM

High Scoring Gene Products

Symbol, full name Information P value
AT3G49070 protein from Arabidopsis thaliana 2.7e-77
AT3G19330 protein from Arabidopsis thaliana 3.3e-24
AT3G19250 protein from Arabidopsis thaliana 1.3e-22
AT1G20180 protein from Arabidopsis thaliana 9.3e-22

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046315
        (353 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2101363 - symbol:AT3G49070 species:3702 "Arabi...   778  2.7e-77   1
TAIR|locus:2090624 - symbol:AT3G19330 "AT3G19330" species...   277  3.3e-24   1
TAIR|locus:2094123 - symbol:AT3G19250 "AT3G19250" species...   262  1.3e-22   1
TAIR|locus:2198591 - symbol:AT1G20180 "AT1G20180" species...   255  9.3e-22   1


>TAIR|locus:2101363 [details] [associations]
            symbol:AT3G49070 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM] GO:GO:0016021 EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AL132967 InterPro:IPR007749
            Pfam:PF05055 IPI:IPI00547589 PIR:T46123 RefSeq:NP_190476.1
            UniGene:At.43292 EnsemblPlants:AT3G49070.1 GeneID:824069
            KEGG:ath:AT3G49070 TAIR:At3g49070 eggNOG:NOG316842
            HOGENOM:HOG000070797 InParanoid:Q9SMU4 OMA:AFRTESY PhylomeDB:Q9SMU4
            ProtClustDB:CLSN2684227 Genevestigator:Q9SMU4 Uniprot:Q9SMU4
        Length = 416

 Score = 778 (278.9 bits), Expect = 2.7e-77, P = 2.7e-77
 Identities = 172/342 (50%), Positives = 233/342 (68%)

Query:    11 DVDVREEYAHAFRTESYNEFWTRVLALSNKDSAKSIQ-----VEST-TAARLSSYRLFAE 64
             DVDVREEYA+AFRTESYN FWTRV+ LS K SA S       +ES+ T+ARL SYRLFA 
Sbjct:    68 DVDVREEYANAFRTESYNHFWTRVVQLSRKKSAVSSSSSSPPIESSSTSARLMSYRLFAH 127

Query:    65 QLLDPDQSTVIRILDLVK----TPSLIFDYFTQTANASLFFGPLLKDIDNVRIKYRSFKV 120
              LLDPD +T+ RILD+ +    T +L+ DYF +TANA L    LLK+I ++R KY S K 
Sbjct:   128 NLLDPDLNTITRILDVSRVGRHTRTLLSDYFLETANAFLLCTQLLKNIHHLRSKYESLKP 187

Query:   121 IVNSLQNAHALPINYVSSVVIRLTEFSNLSNPFASAAPTTRRFRVVQAGCGKLLKQLESS 180
               +S +N ++L      +++ + TE S   +PF S+     R +++++GC  LLK+LES 
Sbjct:   188 KFHS-ENHNSL------ALIDQFTEISKWFDPFISSGS---RIQLIRSGCLYLLKRLESR 237

Query:   181 RDKARARLQLINITKHGSATFLLAITISLTXXXXXXXXXXXXXXPGLIAASLELASTR-R 239
             RDK RA+L+LIN   H S   +LA+T +L               P L+A+  + A  R +
Sbjct:   238 RDKTRAKLKLINGLTHSSGLLVLALTTTLIVTIASHAFALFLAAPTLLASQFKPAGLRNK 297

Query:   240 LVRVSTQLDAAAKGTYILNRDLDTISRLVARLNDELEHMRSTVKFWLDRGEVRLQASGEV 299
             L + + +LD AAKGTYIL+RDLDTISRLV R+NDE+ H+R+  +FW+ RG  R++ S EV
Sbjct:   298 LTKTAARLDVAAKGTYILSRDLDTISRLVTRINDEVNHVRAMAEFWVGRGSGRVRGSEEV 357

Query:   300 ARQLLKNDASFSQQLDELEEHLYLCFMTVNRARNLVMKEILD 341
             AR+L + + SFS++LDELEEH+YLCFMT+NRARNL++KEILD
Sbjct:   358 ARELKRCEESFSEELDELEEHIYLCFMTINRARNLLVKEILD 399


>TAIR|locus:2090624 [details] [associations]
            symbol:AT3G19330 "AT3G19330" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0005739 "mitochondrion" evidence=ISM]
            [GO:0008150 "biological_process" evidence=ND] [GO:0005886 "plasma
            membrane" evidence=IDA] GO:GO:0016021 GO:GO:0005886 EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AB025624 InterPro:IPR007749
            Pfam:PF05055 HOGENOM:HOG000071037 ProtClustDB:CLSN2680847
            EMBL:BT032878 IPI:IPI00516825 IPI:IPI00537342 IPI:IPI00541115
            RefSeq:NP_188564.2 RefSeq:NP_974339.1 RefSeq:NP_974340.1
            UniGene:At.43813 UniGene:At.50201 EnsemblPlants:AT3G19330.1
            GeneID:821467 KEGG:ath:AT3G19330 TAIR:At3g19330 eggNOG:NOG242218
            InParanoid:Q9LT84 OMA:NLTREYT PhylomeDB:Q9LT84
            Genevestigator:Q9LT84 Uniprot:Q9LT84
        Length = 382

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 97/355 (27%), Positives = 171/355 (48%)

Query:     1 SSADISSQRTDVDVREEYAHAFRTESYNEFWTRVLALSNKDSAKSIQVESTTAARLSSYR 60
             S  D S      ++  E AHAF+T SY++  +RV  + +        ++      LS   
Sbjct:    34 SRNDASISSPTFNLSRELAHAFQTPSYHDVRSRVHVVVDLTQIHHRLIQPDIELLLS--- 90

Query:    61 LFAEQLLDPDQSTV---IRILDLVKTPSLIFDYFTQTANASLFFGPLLKDIDNVRIKYRS 117
                 Q+L P++  V   IR +      +L+  YF  + +A+     L +++ + R    +
Sbjct:    91 ----QVLQPNKECVQEAIRHVKQTTLTNLVSTYFQHSEDATRLCLNLYQNVHSARHHLYT 146

Query:   118 FKVIVNSLQNAHALPINYVSSVVIRLTEFSNLS---NPFASAAPTTRRFRVVQAGCGKLL 174
               + + ++    +LP    S   +    F  L    NPF+S  P +  FR  Q    +L 
Sbjct:   147 PLLDLFNIFPGDSLPAIDESLCDLAFDVFLKLDTFENPFSS--PESYSFRDTQLCFSQLK 204

Query:   175 KQLESSRDKARARLQLINITKHGSATFLLAITISLTXXXXXXXXXXX---XXXPG-LIAA 230
               L+    K+R+R++LI+    GS+  L+A  +++                   G L + 
Sbjct:   205 HNLDRRLRKSRSRVRLIHHATAGSSLCLVAAVVAVAASAVVIASHALPILLVVAGPLCSP 264

Query:   231 SLELASTRRLVRVSTQLDAAAKGTYILNRDLDTISRLVARLNDELEHMRSTVKFWLDRGE 290
              L  +  R+ +    QL+AA+KGT++LN+DLDTI RLV+RL+  +E+ +  ++  L+RG 
Sbjct:   265 YLPHSFKRKELTNICQLNAASKGTFVLNKDLDTIDRLVSRLHTGIEYDKFLIRLGLERGR 324

Query:   291 VRLQASGEVARQLLKNDASFSQQLDELEEHLYLCFMTVNRARNLVMKEILDPGQS 345
               + +  E+ + L K+    + QL +LE+H+ L F  VN+AR+L++ EI  P  S
Sbjct:   325 -DVHSIQEILKLLRKSHLPLTHQLKDLEDHICLWFTNVNKARSLLLTEIHLPRPS 378


>TAIR|locus:2094123 [details] [associations]
            symbol:AT3G19250 "AT3G19250" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] GO:GO:0016021 EMBL:CP002686 GenomeReviews:BA000014_GR
            EMBL:AP000419 InterPro:IPR007749 Pfam:PF05055 EMBL:DQ446674
            EMBL:DQ653093 IPI:IPI00535377 RefSeq:NP_188556.2 UniGene:At.50199
            EnsemblPlants:AT3G19250.1 GeneID:821459 KEGG:ath:AT3G19250
            TAIR:At3g19250 eggNOG:NOG291252 HOGENOM:HOG000071037
            InParanoid:Q9LJK4 OMA:FASPESH PhylomeDB:Q9LJK4
            ProtClustDB:CLSN2680847 Genevestigator:Q9LJK4 Uniprot:Q9LJK4
        Length = 360

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 91/342 (26%), Positives = 164/342 (47%)

Query:    13 DVREEYAHAFRTESYNEFWTRVLALSNKDSAKSIQVESTTAARLSSYRLFAEQLLDPDQS 72
             ++  E AHAF+T SY++  +R+L +              T   L    LF  Q L P+  
Sbjct:    35 NLSHELAHAFQTPSYHDIRSRLLVID------------PTQENLE---LFLSQELRPNNE 79

Query:    73 TVIRILDL-----VKTPSLIFDYFTQTANASLFFGPLLKDIDNVRIK-YRSFKVIVNSL- 125
             +V   L L         +L+  YF  + +A+ F   L +++ + R   Y     + N   
Sbjct:    80 SVQEALSLRHAKQTTLTNLVSTYFQHSEDATRFCLNLYQNVHSARCHLYTPLLDLFNIFP 139

Query:   126 QNAH-ALPINYVSSVVIRLTEFSNLSNPFASAAPTTRRFRVVQAGCGKLLKQLESSRDKA 184
             +++H A+  ++ +       +     NPFAS  P +  F+  Q    +L  +L++   K+
Sbjct:   140 RDSHSAIDESFCNLAFDVFLKLDTFENPFAS--PESHSFQDTQLCFYQLADKLDTRIRKS 197

Query:   185 RARLQLINITKHGSA----TFLLAITISLTXXXXXXXXXXXXXXPGLIAASLELASTRRL 240
             ++R++L++    GSA    T ++ +  S                  L    L  +  ++ 
Sbjct:   198 KSRVRLLHHATAGSALCLVTAVVVVAASAAFIAYHALPTILVVAGPLCTPYLPHSFKKKE 257

Query:   241 VRVSTQLDAAAKGTYILNRDLDTISRLVARLNDELEHMRSTVKFWLDRGEVRLQASGEVA 300
             +    QL+ AAKGT+ LN+DLDTI RLV+RL+  +++ +  ++  L+RG   +    E  
Sbjct:   258 LSNIFQLNVAAKGTFALNKDLDTIDRLVSRLHTGVKNDKLLIRLGLERGR-DVYTIPEFV 316

Query:   301 RQLLKNDASFSQQLDELEEHLYLCFMTVNRARNLVMKEILDP 342
             +QL K+  + + QL+ L +H+   F  VN++R+L++KEIL P
Sbjct:   317 KQLRKSHVNHTHQLEVLVDHICRWFTNVNKSRSLLLKEILRP 358


>TAIR|locus:2198591 [details] [associations]
            symbol:AT1G20180 "AT1G20180" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR
            EMBL:AC022472 InterPro:IPR007749 Pfam:PF05055 EMBL:DQ446265
            EMBL:AY630760 EMBL:AY924677 IPI:IPI00543184 IPI:IPI00555546
            PIR:E86335 RefSeq:NP_001077567.1 RefSeq:NP_173445.2
            UniGene:At.50782 PRIDE:Q6DYE5 EnsemblPlants:AT1G20180.1
            GeneID:838607 KEGG:ath:AT1G20180 TAIR:At1g20180 eggNOG:NOG322865
            HOGENOM:HOG000240802 InParanoid:Q6DYE5 OMA:ARGAYIV PhylomeDB:Q6DYE5
            ProtClustDB:CLSN2681503 Genevestigator:Q6DYE5 Uniprot:Q6DYE5
        Length = 390

 Score = 255 (94.8 bits), Expect = 9.3e-22, P = 9.3e-22
 Identities = 78/246 (31%), Positives = 117/246 (47%)

Query:   119 KVIVNSLQNAHALPINYVSSVVIRLTEFSNLSNPFASAAPTTRRFRVVQAGCGKLLKQLE 178
             K + N  +     P    + +   L+ F+ L NP         +FR+V      LL +L 
Sbjct:   151 KRVCNGAKTLECSPEMLCALIFQELSRFAALKNPLCRIV-NEAQFRIVHDANSDLLTKLT 209

Query:   179 SSRDKARARLQLINITKH-GSATFLL---AITISLTXXXXXXXXXXXXXXPGLIA-ASLE 233
             S + + R +++     K  G  + ++   AI I+L               P L+   S  
Sbjct:   210 SKKRRIRRKIRFFKFCKKLGGYSLVITHSAIVITLLIIALHSILGVFAA-PALLGLCSFC 268

Query:   234 LASTRR-------------LVRVSTQLDAAAKGTYILNRDLDTISRLVARLNDELEHMRS 280
             L   ++             L ++ TQ+D AAKG +IL  DLDT+SRL  RL DE+EH R 
Sbjct:   269 LLRKKKAKGRMHKSNKDTTLEKLGTQIDIAAKGMFILINDLDTLSRLAGRLCDEIEH-RK 327

Query:   281 TVKFWLDRGEVRLQASGEVARQLLKNDASFSQQLDELEEHLYLCFMTVNRARNLVMKEIL 340
             TV     +   +++   E  R+   ++  FS QL ELEEHLYLCF T+NR+R LV+ +I 
Sbjct:   328 TVAAMCAKSR-KIEVLKEALREFNGHEEKFSDQLQELEEHLYLCFHTINRSRRLVLAQIT 386

Query:   341 DPGQST 346
               GQS+
Sbjct:   387 --GQSS 390

 Score = 154 (59.3 bits), Expect = 2.5e-08, P = 2.5e-08
 Identities = 53/217 (24%), Positives = 96/217 (44%)

Query:     7 SQRTDVDVREEYAHAFRTESYNEFWTRV---LALSNKDSAKSIQVESTTAARLSSYRLFA 63
             S  + + V EEY  AFRT SY E  T+    L +++     S     ++++ LS +  F 
Sbjct:    29 SLTSKLSVNEEYKEAFRTNSYLETRTKAEDQLGITSCSKLSSSSPSPSSSSDLSFHSHFT 88

Query:    64 EQLLDPDQSTVIRILDLVKTPSLIFDYFTQTANASLFFGPLLKDIDNVRIKYRSFKVIV- 122
             + LLDP Q T+  ++      +LI  +F  ++ A      LL+ +  ++I +   K ++ 
Sbjct:    89 DYLLDPPQETLDALMQDSSLDNLIVTFFDLSSEACDVCETLLQCLQQIKINHNKIKRVMK 148

Query:   123 ------NSLQNAHALPINYVSSVVIRLTEFSNLSNPFASAAPTTRRFRVVQAGCGKLLKQ 176
                   N  +     P    + +   L+ F+ L NP         +FR+V      LL +
Sbjct:   149 IGKRVCNGAKTLECSPEMLCALIFQELSRFAALKNPLCRIV-NEAQFRIVHDANSDLLTK 207

Query:   177 LESSRDKARARLQLINITKH-GSATFLL---AITISL 209
             L S + + R +++     K  G  + ++   AI I+L
Sbjct:   208 LTSKKRRIRRKIRFFKFCKKLGGYSLVITHSAIVITL 244


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.131   0.359    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      353       339   0.00094  116 3  10 22  0.36    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  609 (65 KB)
  Total size of DFA:  262 KB (2141 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  35.18u 0.10s 35.28t   Elapsed:  00:00:03
  Total cpu time:  35.18u 0.10s 35.28t   Elapsed:  00:00:03
  Start:  Sat May 11 06:42:55 2013   End:  Sat May 11 06:42:58 2013

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