Query 046319
Match_columns 135
No_of_seqs 165 out of 1082
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 19:04:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046319.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046319hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 99.9 9E-27 3.1E-31 198.5 9.9 103 32-134 4-148 (605)
2 3d2f_A Heat shock protein homo 99.9 1.3E-26 4.6E-31 199.8 10.2 103 32-134 4-151 (675)
3 1yuw_A Heat shock cognate 71 k 99.9 1.7E-26 5.8E-31 195.0 9.3 103 32-134 6-152 (554)
4 2kho_A Heat shock protein 70; 99.9 9.4E-26 3.2E-30 192.2 10.2 103 32-134 4-148 (605)
5 3i33_A Heat shock-related 70 k 99.9 3.1E-25 1.1E-29 179.0 11.1 107 28-134 21-171 (404)
6 3qfu_A 78 kDa glucose-regulate 99.9 1.9E-24 6.5E-29 173.2 10.4 105 30-134 18-166 (394)
7 4gni_A Putative heat shock pro 99.9 3.5E-24 1.2E-28 173.4 11.0 105 30-134 13-163 (409)
8 2v7y_A Chaperone protein DNAK; 99.9 8E-24 2.7E-28 176.8 11.1 102 32-134 4-122 (509)
9 1dkg_D Molecular chaperone DNA 99.9 1.4E-23 4.7E-28 168.3 10.3 103 32-134 4-148 (383)
10 1jce_A ROD shape-determining p 99.2 1.7E-11 5.7E-16 96.7 4.8 92 32-134 5-108 (344)
11 2ych_A Competence protein PILM 97.9 3.4E-07 1.1E-11 72.7 -4.3 101 26-129 9-127 (377)
12 1k8k_A ARP3, actin-like protei 97.8 9.5E-06 3.2E-10 65.4 3.4 87 33-134 8-120 (418)
13 2fsj_A Hypothetical protein TA 97.8 2.6E-06 8.8E-11 67.7 -0.1 33 30-72 21-53 (346)
14 2fxu_A Alpha-actin-1, actin, a 97.7 7.3E-06 2.5E-10 65.4 0.9 96 33-134 8-113 (375)
15 3h1q_A Ethanolamine utilizatio 96.8 0.0077 2.6E-07 45.1 9.1 26 109-134 80-105 (272)
16 1k8k_B ARP2, actin-like protei 96.8 0.00018 6.2E-09 57.8 0.0 100 33-134 9-117 (394)
17 2zgy_A Plasmid segregation pro 96.7 0.00057 1.9E-08 53.2 1.9 24 32-55 2-26 (320)
18 4ehu_A Activator of 2-hydroxyi 96.2 0.0026 8.7E-08 48.2 2.7 21 31-51 2-22 (276)
19 4a2a_A Cell division protein F 94.1 0.066 2.2E-06 43.4 5.2 78 28-131 6-86 (419)
20 3qb0_A Actin-related protein 4 91.3 0.14 4.8E-06 42.6 3.4 42 33-82 26-71 (498)
21 4fo0_A Actin-related protein 8 90.7 0.11 3.8E-06 43.3 2.3 26 32-57 17-42 (593)
22 3i8b_A Xylulose kinase; strain 88.8 0.27 9.3E-06 40.7 3.2 23 29-51 4-28 (515)
23 3ezw_A Glycerol kinase; glycer 88.5 0.27 9.1E-06 40.7 3.0 22 30-51 4-26 (526)
24 3djc_A Type III pantothenate k 87.3 0.41 1.4E-05 36.6 3.2 22 31-52 3-24 (266)
25 1hux_A Activator of (R)-2-hydr 87.0 0.45 1.5E-05 36.0 3.2 21 31-51 4-25 (270)
26 4bc3_A Xylulose kinase; transf 85.1 0.57 1.9E-05 38.9 3.2 22 30-51 10-32 (538)
27 3ifr_A Carbohydrate kinase, FG 84.8 0.63 2.2E-05 38.3 3.3 22 30-51 7-29 (508)
28 3h3n_X Glycerol kinase; ATP-bi 84.3 0.72 2.4E-05 37.9 3.4 22 30-51 5-27 (506)
29 3jvp_A Ribulokinase; PSI-II, N 84.0 0.65 2.2E-05 38.8 3.1 23 30-52 5-29 (572)
30 2p3r_A Glycerol kinase; glycer 83.7 0.57 2E-05 38.6 2.6 21 31-51 4-25 (510)
31 2h3g_X Biosynthetic protein; p 83.7 0.86 3E-05 34.8 3.4 20 32-51 2-21 (268)
32 3l0q_A Xylulose kinase; xlylul 83.6 0.69 2.4E-05 38.5 3.1 22 30-51 5-27 (554)
33 3h6e_A Carbohydrate kinase, FG 82.5 0.69 2.4E-05 38.1 2.6 21 31-51 7-28 (482)
34 3g25_A Glycerol kinase; IDP007 82.4 0.67 2.3E-05 38.0 2.5 21 31-51 7-28 (501)
35 2w40_A Glycerol kinase, putati 82.2 0.75 2.6E-05 37.7 2.7 21 31-51 5-26 (503)
36 3ll3_A Gluconate kinase; xylul 82.2 0.81 2.8E-05 37.6 2.9 21 31-51 5-26 (504)
37 4e1j_A Glycerol kinase; struct 82.1 0.81 2.8E-05 37.8 2.9 21 31-51 27-48 (520)
38 3hz6_A Xylulokinase; xylulose, 81.9 0.71 2.4E-05 38.0 2.5 21 31-51 6-27 (511)
39 1hjr_A Holliday junction resol 81.4 1.8 6.2E-05 30.5 4.2 25 31-55 2-28 (158)
40 2uyt_A Rhamnulokinase; rhamnos 81.4 0.76 2.6E-05 37.4 2.5 18 31-48 5-22 (489)
41 2zf5_O Glycerol kinase; hypert 81.0 0.81 2.8E-05 37.4 2.5 21 31-51 4-25 (497)
42 2dpn_A Glycerol kinase; thermu 80.9 0.82 2.8E-05 37.4 2.5 21 31-51 3-24 (495)
43 2itm_A Xylulose kinase, xylulo 80.5 0.86 2.9E-05 37.1 2.5 20 32-51 2-22 (484)
44 3bex_A Type III pantothenate k 80.2 0.9 3.1E-05 34.2 2.3 21 31-51 4-24 (249)
45 1vhx_A Putative holliday junct 79.2 1.1 3.6E-05 31.3 2.3 19 31-49 4-22 (150)
46 2d4w_A Glycerol kinase; alpha 78.9 1 3.6E-05 36.9 2.5 21 31-51 3-24 (504)
47 1zbs_A Hypothetical protein PG 78.0 1.6 5.5E-05 33.0 3.2 20 32-51 2-21 (291)
48 1iv0_A Hypothetical protein; r 77.9 1.3 4.5E-05 28.7 2.3 18 32-49 3-20 (98)
49 2f9w_A Pantothenate kinase; CO 77.3 2 6.7E-05 32.9 3.5 23 30-52 23-46 (271)
50 1zxo_A Conserved hypothetical 75.4 1.5 5.2E-05 33.1 2.4 20 32-51 2-21 (291)
51 1nu0_A Hypothetical protein YQ 73.6 2.6 8.7E-05 29.0 3.0 19 32-50 5-23 (138)
52 4ep4_A Crossover junction endo 73.5 3.3 0.00011 29.4 3.6 18 31-48 2-19 (166)
53 1zc6_A Probable N-acetylglucos 73.4 2.6 8.7E-05 31.9 3.2 21 31-51 12-33 (305)
54 4apw_A ALP12; actin-like prote 71.9 0.74 2.5E-05 35.8 -0.2 53 30-82 7-73 (329)
55 2ews_A Pantothenate kinase; PA 69.8 2.7 9.3E-05 32.4 2.6 22 31-52 21-42 (287)
56 2yhw_A Bifunctional UDP-N-acet 63.8 3.9 0.00013 31.4 2.5 22 30-51 30-52 (343)
57 4htl_A Beta-glucoside kinase; 63.2 4.2 0.00014 30.7 2.5 23 29-51 3-26 (297)
58 3vov_A Glucokinase, hexokinase 62.4 4.3 0.00015 30.7 2.5 20 31-50 2-21 (302)
59 2e2o_A Hexokinase; acetate and 60.9 5 0.00017 30.0 2.6 20 32-51 4-24 (299)
60 2ch5_A NAGK protein; transfera 59.2 6.1 0.00021 30.1 2.8 21 31-51 7-28 (347)
61 2ivn_A O-sialoglycoprotein end 58.5 6.1 0.00021 30.6 2.7 21 31-51 2-22 (330)
62 2gup_A ROK family protein; sug 55.9 5.4 0.00019 29.7 2.0 22 30-51 4-26 (292)
63 3epq_A Putative fructokinase; 55.7 6.7 0.00023 29.8 2.5 22 30-51 3-25 (302)
64 1sz2_A Glucokinase, glucose ki 55.2 7.5 0.00026 29.7 2.8 23 30-52 14-38 (332)
65 2qm1_A Glucokinase; alpha-beta 54.5 7.1 0.00024 29.4 2.5 21 31-51 7-28 (326)
66 3mcp_A Glucokinase; structural 54.1 11 0.00037 29.8 3.5 24 28-51 7-30 (366)
67 3vgl_A Glucokinase; ROK family 53.9 7.3 0.00025 29.7 2.5 18 31-48 3-20 (321)
68 4db3_A Glcnac kinase, N-acetyl 52.5 8.4 0.00029 29.5 2.6 22 30-51 24-46 (327)
69 1nbw_A Glycerol dehydratase re 51.4 5.5 0.00019 34.0 1.5 25 31-55 3-29 (607)
70 2aa4_A Mannac kinase, putative 50.8 10 0.00035 28.1 2.8 20 32-51 3-23 (289)
71 1saz_A Probable butyrate kinas 50.0 14 0.00049 29.0 3.7 20 31-50 3-22 (381)
72 3htv_A D-allose kinase, alloki 47.8 11 0.00036 28.7 2.5 22 30-51 7-29 (310)
73 3cet_A Conserved archaeal prot 46.8 14 0.00047 29.2 3.0 21 31-51 1-22 (334)
74 1bdg_A Hexokinase; phosphotran 44.9 13 0.00043 30.3 2.7 19 32-50 70-89 (451)
75 3js6_A Uncharacterized PARM pr 44.5 26 0.00089 27.3 4.4 53 30-84 4-73 (355)
76 3r8e_A Hypothetical sugar kina 44.1 12 0.00041 28.4 2.3 24 28-51 17-41 (321)
77 1kcf_A Hypothetical 30.2 KD pr 44.0 21 0.00071 27.1 3.6 18 31-48 41-58 (258)
78 1woq_A Inorganic polyphosphate 43.8 14 0.00048 27.2 2.6 18 31-48 13-30 (267)
79 3dwl_A Actin-related protein 3 43.6 3.9 0.00013 33.0 -0.6 19 34-52 9-27 (427)
80 2q2r_A Glucokinase 1, putative 42.8 14 0.00048 28.7 2.6 20 30-49 29-48 (373)
81 2ap1_A Putative regulator prot 42.5 15 0.00051 27.7 2.6 21 31-51 25-46 (327)
82 1z6r_A MLC protein; transcript 41.9 14 0.00047 29.0 2.4 22 30-51 85-107 (406)
83 2yhx_A Hexokinase B; transfera 41.6 15 0.0005 30.1 2.6 20 33-52 64-84 (457)
84 2hoe_A N-acetylglucosamine kin 41.2 16 0.00056 28.4 2.7 22 30-51 87-109 (380)
85 2nrh_A Transcriptional activat 41.1 14 0.00047 27.2 2.1 19 32-52 3-21 (219)
86 3mdp_A Cyclic nucleotide-bindi 40.8 57 0.002 20.3 5.0 77 4-82 10-89 (142)
87 1t6c_A Exopolyphosphatase; alp 40.4 28 0.00095 26.7 3.9 26 31-56 13-40 (315)
88 3nuw_A 2-OXO-3-deoxygalactonat 39.3 25 0.00084 27.2 3.4 19 33-51 9-27 (295)
89 3bex_A Type III pantothenate k 39.1 17 0.00058 27.0 2.4 20 30-51 123-142 (249)
90 1z05_A Transcriptional regulat 36.4 17 0.00059 28.7 2.2 22 30-51 108-130 (429)
91 3o8m_A Hexokinase; rnaseh-like 36.3 20 0.00068 29.6 2.6 17 32-48 82-98 (485)
92 2a97_A BONT/F, botulinum neuro 35.0 52 0.0018 26.8 4.7 38 10-47 102-140 (439)
93 1zb7_A Neurotoxin; hexxh metal 33.5 43 0.0015 27.4 4.0 38 10-47 103-141 (455)
94 2zi0_A Protein 2B, TAV2B; RNAI 30.8 26 0.00088 21.4 1.8 29 1-29 11-42 (75)
95 1cza_N Hexokinase type I; stru 29.8 29 0.00099 30.8 2.7 16 33-48 81-96 (917)
96 1z7h_A Tetanus toxin light cha 29.4 42 0.0014 27.4 3.3 38 10-47 106-144 (447)
97 1epw_A Bontoxilysin B, botulin 28.3 48 0.0016 30.6 3.7 55 11-72 103-162 (1290)
98 1cza_N Hexokinase type I; stru 27.5 34 0.0011 30.4 2.7 17 32-48 528-544 (917)
99 3hm8_A Hexokinase-3; glucose, 27.0 37 0.0013 27.7 2.7 16 33-48 62-77 (445)
100 3aap_A Ectonucleoside triphosp 25.1 43 0.0015 26.2 2.6 18 31-48 4-21 (353)
101 3f9m_A Glucokinase; hexokinase 24.2 43 0.0015 27.5 2.6 16 33-48 80-95 (470)
102 2fpq_A Botulinum neurotoxin D 23.4 69 0.0024 26.1 3.5 39 10-48 109-148 (444)
103 2qn0_A Neurotoxin; botulism, s 23.0 72 0.0025 25.9 3.5 38 10-47 101-139 (430)
104 3bzc_A TEX; helix-turn-helix, 23.0 63 0.0022 28.4 3.5 34 16-51 317-352 (785)
105 2d0o_A DIOL dehydratase-reacti 22.6 57 0.002 27.8 3.0 26 31-56 3-31 (610)
106 2a6a_A Hypothetical protein TM 20.9 80 0.0027 22.9 3.3 24 28-51 10-33 (218)
107 3ffz_A Botulinum neurotoxin ty 20.8 81 0.0028 29.0 3.7 35 10-44 98-133 (1252)
108 3t69_A Putative 2-dehydro-3-de 20.0 61 0.0021 25.4 2.6 17 33-49 10-26 (330)
109 3cer_A Possible exopolyphospha 20.0 92 0.0031 24.1 3.6 27 30-56 16-45 (343)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=99.94 E-value=9e-27 Score=198.51 Aligned_cols=103 Identities=47% Similarity=0.704 Sum_probs=96.5
Q ss_pred cceEeccCCceEEEEEeCCeEEEEECCCCCeeeeEEEEEc-CCeeEecHHHHHHHHcCCCCceeecccccCCCCCChh--
Q 046319 32 MKTWVSLFLISCVGVWKNDRVQIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVATNPQNTVFDAKLLIRRRFSDPS-- 108 (135)
Q Consensus 32 i~gID~GTtns~vA~~~~g~~~ii~n~~g~~~~PS~V~~~-~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~d~~-- 108 (135)
+.||||||||||||++++|.+++++|..|++++||+|+|. ++++++|..|+.++..+|.++++++||+||++++|+.
T Consensus 4 viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~ 83 (605)
T 4b9q_A 4 IIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQ 83 (605)
T ss_dssp EEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSHHHH
T ss_pred EEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCHHHH
Confidence 4569999999999999999999999999999999999998 5689999999999999999999999999999988732
Q ss_pred ---------------------------------------HHHHHHHHcCCCCCcEEEeeCCCccC
Q 046319 109 ---------------------------------------TKEIAEAYLGQALKNAVVTVPAYFND 134 (135)
Q Consensus 109 ---------------------------------------lk~~Ae~~~g~~v~~vVItVPa~F~~ 134 (135)
|++.|+.++|.++.++|||||+||++
T Consensus 84 ~~~~~~p~~~~~~~~g~~~~~~~~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~ 148 (605)
T 4b9q_A 84 RDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFND 148 (605)
T ss_dssp HHHTTCSSEEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCH
T ss_pred HHhhcCCeEEEEcCCCceEEEECCEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCH
Confidence 88899999999999999999999986
No 2
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=99.93 E-value=1.3e-26 Score=199.83 Aligned_cols=103 Identities=25% Similarity=0.392 Sum_probs=96.0
Q ss_pred cceEeccCCceEEEEEeCCeEEEEECCCCCeeeeEEEEEcCCeeEecHHHHHHHHcCCCCceeecccccCCCCCChh---
Q 046319 32 MKTWVSLFLISCVGVWKNDRVQIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVATNPQNTVFDAKLLIRRRFSDPS--- 108 (135)
Q Consensus 32 i~gID~GTtns~vA~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~d~~--- 108 (135)
+.||||||||||||++++|++++++|+.|++++||+|+|.++++++|..|+.++..+|.++++++||+||++++|+.
T Consensus 4 ~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~~ 83 (675)
T 3d2f_A 4 PFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFEQ 83 (675)
T ss_dssp CEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTHHH
T ss_pred EEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHHHH
Confidence 56799999999999999999999999999999999999998899999999999999999999999999999875420
Q ss_pred ------------------------------------------HHHHHHHHcCCCCCcEEEeeCCCccC
Q 046319 109 ------------------------------------------TKEIAEAYLGQALKNAVVTVPAYFND 134 (135)
Q Consensus 109 ------------------------------------------lk~~Ae~~~g~~v~~vVItVPa~F~~ 134 (135)
||+.|+.++|.++.++|||||+||++
T Consensus 84 ~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~ 151 (675)
T 3d2f_A 84 ESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTE 151 (675)
T ss_dssp HHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCH
T ss_pred HHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCH
Confidence 78889999999999999999999986
No 3
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.93 E-value=1.7e-26 Score=195.01 Aligned_cols=103 Identities=73% Similarity=1.002 Sum_probs=95.7
Q ss_pred cceEeccCCceEEEEEeCCeEEEEECCCCCeeeeEEEEEcCCeeEecHHHHHHHHcCCCCceeecccccCCCCCCh----
Q 046319 32 MKTWVSLFLISCVGVWKNDRVQIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVATNPQNTVFDAKLLIRRRFSDP---- 107 (135)
Q Consensus 32 i~gID~GTtns~vA~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~d~---- 107 (135)
+.|||||||||+||++++|++++++|+.|++++||+|+|.++++++|..|+.++..+|.++++++||+||++++|+
T Consensus 6 ~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~~ 85 (554)
T 1yuw_A 6 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQS 85 (554)
T ss_dssp CEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCSHHHH
T ss_pred EEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcHHHHH
Confidence 4569999999999999999999999999999999999999889999999999999999999999999999987652
Q ss_pred -------------------------------h---------HHHHHHHHcCCCCCcEEEeeCCCccC
Q 046319 108 -------------------------------S---------TKEIAEAYLGQALKNAVVTVPAYFND 134 (135)
Q Consensus 108 -------------------------------~---------lk~~Ae~~~g~~v~~vVItVPa~F~~ 134 (135)
+ ||+.|+.++|.++.++|||||++|++
T Consensus 86 ~~~~~p~~v~~~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~ 152 (554)
T 1yuw_A 86 DMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFND 152 (554)
T ss_dssp HHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCH
T ss_pred HhhcCCeEEEecCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCH
Confidence 1 78889999999999999999999986
No 4
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=99.92 E-value=9.4e-26 Score=192.21 Aligned_cols=103 Identities=48% Similarity=0.726 Sum_probs=94.7
Q ss_pred cceEeccCCceEEEEEeCCeEEEEECCCCCeeeeEEEEEc-CCeeEecHHHHHHHHcCCCCceeecccccCCCCCCh---
Q 046319 32 MKTWVSLFLISCVGVWKNDRVQIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVATNPQNTVFDAKLLIRRRFSDP--- 107 (135)
Q Consensus 32 i~gID~GTtns~vA~~~~g~~~ii~n~~g~~~~PS~V~~~-~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~d~--- 107 (135)
+.||||||||||||++++|.+++++|..|++++||+|+|. ++++++|..|+.++..+|.++++++||+||++++|+
T Consensus 4 viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~v~ 83 (605)
T 2kho_A 4 IIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQ 83 (605)
T ss_dssp CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTTHH
T ss_pred EEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHHHH
Confidence 4569999999999999999999999999999999999996 578999999999999999999999999999877542
Q ss_pred -----------------------------h---------HHHHHHHHcCCCCCcEEEeeCCCccC
Q 046319 108 -----------------------------S---------TKEIAEAYLGQALKNAVVTVPAYFND 134 (135)
Q Consensus 108 -----------------------------~---------lk~~Ae~~~g~~v~~vVItVPa~F~~ 134 (135)
. |++.|+.++|.++.++|||||+||++
T Consensus 84 ~~~~~~p~~~~~~~~g~~~i~~~g~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d 148 (605)
T 2kho_A 84 RDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFND 148 (605)
T ss_dssp HHHHHCSSCEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCH
T ss_pred HHhhcCCeEEEECCCCceEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCH
Confidence 1 78889999999999999999999986
No 5
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.92 E-value=3.1e-25 Score=178.96 Aligned_cols=107 Identities=66% Similarity=0.934 Sum_probs=97.5
Q ss_pred cccccceEeccCCceEEEEEeCCeEEEEECCCCCeeeeEEEEEcCCeeEecHHHHHHHHcCCCCceeecccccCCCCCCh
Q 046319 28 RRRVMKTWVSLFLISCVGVWKNDRVQIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVATNPQNTVFDAKLLIRRRFSDP 107 (135)
Q Consensus 28 ~~~~i~gID~GTtns~vA~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~d~ 107 (135)
+...+.|||||||||+||++.+|.+++++|..|++++||+|+|.++++++|..|+.++.++|.++++++||+||++++|+
T Consensus 21 ~~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~ 100 (404)
T 3i33_A 21 QSMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDA 100 (404)
T ss_dssp --CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSH
T ss_pred ccCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcH
Confidence 34456679999999999999999999999999999999999999889999999999999999999999999999998763
Q ss_pred h--------------------------------------------HHHHHHHHcCCCCCcEEEeeCCCccC
Q 046319 108 S--------------------------------------------TKEIAEAYLGQALKNAVVTVPAYFND 134 (135)
Q Consensus 108 ~--------------------------------------------lk~~Ae~~~g~~v~~vVItVPa~F~~ 134 (135)
. |++.|+.++|.++.++|||||++|++
T Consensus 101 ~~~~~~~~~p~~~~~~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~ 171 (404)
T 3i33_A 101 TVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFND 171 (404)
T ss_dssp HHHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCH
T ss_pred HHHHHHhhCCceEEccCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCH
Confidence 1 78889999999999999999999985
No 6
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.91 E-value=1.9e-24 Score=173.22 Aligned_cols=105 Identities=62% Similarity=0.868 Sum_probs=97.1
Q ss_pred cccceEeccCCceEEEEEeCCeEEEEECCCCCeeeeEEEEEcCCeeEecHHHHHHHHcCCCCceeecccccCCCCCChh-
Q 046319 30 RVMKTWVSLFLISCVGVWKNDRVQIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVATNPQNTVFDAKLLIRRRFSDPS- 108 (135)
Q Consensus 30 ~~i~gID~GTtns~vA~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~d~~- 108 (135)
..+.|||||||||+||++.+|.+++++|..|++++||+|+|.++++++|..|+.....+|.++++++||+||++++++.
T Consensus 18 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 97 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSV 97 (394)
T ss_dssp CSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHHH
T ss_pred CCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHHH
Confidence 3456699999999999999999999999999999999999998899999999999999999999999999999876631
Q ss_pred -------------------------------------------HHHHHHHHcCCCCCcEEEeeCCCccC
Q 046319 109 -------------------------------------------TKEIAEAYLGQALKNAVVTVPAYFND 134 (135)
Q Consensus 109 -------------------------------------------lk~~Ae~~~g~~v~~vVItVPa~F~~ 134 (135)
|++.|+.+++.++.++|||||++|++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~ 166 (394)
T 3qfu_A 98 QKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFND 166 (394)
T ss_dssp HHHHTTCSSEEEEETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCH
T ss_pred HHHhhcCCeEEEcCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCH
Confidence 78889999999999999999999985
No 7
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=99.91 E-value=3.5e-24 Score=173.44 Aligned_cols=105 Identities=30% Similarity=0.468 Sum_probs=96.6
Q ss_pred cccceEeccCCceEEEEEeCCeEEEEECCCCCeeeeEEEEEcCCeeEecHHHHHHHHcCCCCceeecccccCCCCCCh--
Q 046319 30 RVMKTWVSLFLISCVGVWKNDRVQIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVATNPQNTVFDAKLLIRRRFSDP-- 107 (135)
Q Consensus 30 ~~i~gID~GTtns~vA~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~d~-- 107 (135)
..+.|||||||||+||++.+|++++++|..|++++||+|+|.++++++|..|+.++.++|.++++++||+||++++++
T Consensus 13 ~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~~ 92 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVDP 92 (409)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCCC
T ss_pred CcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchhh
Confidence 456779999999999999999999999999999999999999999999999999999999999999999999986431
Q ss_pred -----------------------------------h---------HHHHHHHHcCCCCCcEEEeeCCCccC
Q 046319 108 -----------------------------------S---------TKEIAEAYLGQALKNAVVTVPAYFND 134 (135)
Q Consensus 108 -----------------------------------~---------lk~~Ae~~~g~~v~~vVItVPa~F~~ 134 (135)
+ |++.|+.+++.++.++|||||++|++
T Consensus 93 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~ 163 (409)
T 4gni_A 93 THNHASAHPQEAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTE 163 (409)
T ss_dssp GGGTTSCCCEEETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCH
T ss_pred hhhccccceecCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCH
Confidence 0 88889999999999999999999985
No 8
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.90 E-value=8e-24 Score=176.81 Aligned_cols=102 Identities=46% Similarity=0.692 Sum_probs=93.9
Q ss_pred cceEeccCCceEEEEEeCCeEEEEECCCCCeeeeEEEEEcCCeeEecHHHHHHHHcCCCCceeecccccCCCCC------
Q 046319 32 MKTWVSLFLISCVGVWKNDRVQIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVATNPQNTVFDAKLLIRRRFS------ 105 (135)
Q Consensus 32 i~gID~GTtns~vA~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~------ 105 (135)
+.|||||||||+||++.+|.+++++|..|++++||+|+|.++++++|..|+.+...+| ++++++||+||+++.
T Consensus 4 ~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~~~~~g~ 82 (509)
T 2v7y_A 4 IIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYKVEIEGK 82 (509)
T ss_dssp EEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCCEEETTE
T ss_pred EEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcEEEECCE
Confidence 4569999999999999999999999999999999999998889999999999999999 999999999998875
Q ss_pred --Chh---------HHHHHHHHcCCCCCcEEEeeCCCccC
Q 046319 106 --DPS---------TKEIAEAYLGQALKNAVVTVPAYFND 134 (135)
Q Consensus 106 --d~~---------lk~~Ae~~~g~~v~~vVItVPa~F~~ 134 (135)
+++ |++.|++++|.++.++|||||++|++
T Consensus 83 ~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~ 122 (509)
T 2v7y_A 83 QYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFND 122 (509)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCH
T ss_pred EEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCH
Confidence 222 78889999999999999999999986
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.90 E-value=1.4e-23 Score=168.30 Aligned_cols=103 Identities=48% Similarity=0.726 Sum_probs=93.2
Q ss_pred cceEeccCCceEEEEEeCCeEEEEECCCCCeeeeEEEEEc-CCeeEecHHHHHHHHcCCCCceeecccccCCCCCCh---
Q 046319 32 MKTWVSLFLISCVGVWKNDRVQIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVATNPQNTVFDAKLLIRRRFSDP--- 107 (135)
Q Consensus 32 i~gID~GTtns~vA~~~~g~~~ii~n~~g~~~~PS~V~~~-~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~d~--- 107 (135)
+.|||||||||+||++++|.++++.|..|++++||+|+|. ++++++|..|+.....+|.++++++||+||++++++
T Consensus 4 ~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~ 83 (383)
T 1dkg_D 4 IIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQ 83 (383)
T ss_dssp CCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHHHH
T ss_pred EEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHHHH
Confidence 4569999999999999999999999999999999999996 578999999999999999999999999999876542
Q ss_pred -----------------------------h---------HHHHHHHHcCCCCCcEEEeeCCCccC
Q 046319 108 -----------------------------S---------TKEIAEAYLGQALKNAVVTVPAYFND 134 (135)
Q Consensus 108 -----------------------------~---------lk~~Ae~~~g~~v~~vVItVPa~F~~ 134 (135)
+ +++.|+.+++.++.++|||||++|++
T Consensus 84 ~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~ 148 (383)
T 1dkg_D 84 RDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFND 148 (383)
T ss_dssp HHTTTCSSEEEECSSSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCH
T ss_pred HHhhcCCeEEEEcCCCcEEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCH
Confidence 1 67788899999999999999999985
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.17 E-value=1.7e-11 Score=96.73 Aligned_cols=92 Identities=17% Similarity=0.077 Sum_probs=58.6
Q ss_pred cceEeccCCceEEEEEeCCeEEEEECCCCCeeeeEEEEEcCC--e-eEecHHHHHHHHcCCCCceee--cccccCC--CC
Q 046319 32 MKTWVSLFLISCVGVWKNDRVQIIANDQGNRTTPSYVAFTDT--E-RLIGDAAKNQVATNPQNTVFD--AKLLIRR--RF 104 (135)
Q Consensus 32 i~gID~GTtns~vA~~~~g~~~ii~n~~g~~~~PS~V~~~~~--~-~~vG~~A~~~~~~~p~~~i~~--~KrllG~--~~ 104 (135)
..|||||||||++++..++ .++ .+||+|+|.++ + .++|.+|+.+..++|.++... +|+ |. .+
T Consensus 5 ~igIDlGT~~s~v~~~~~~--~~~-------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~~~p~~~--g~i~~~ 73 (344)
T 1jce_A 5 DIGIDLGTANTLVFLRGKG--IVV-------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKAIRPMRD--GVIADY 73 (344)
T ss_dssp EEEEEECSSEEEEEETTTE--EEE-------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEEECCEET--TEESSH
T ss_pred eEEEEcCcCcEEEEECCCC--EEE-------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEEEecCCC--CeeCCh
Confidence 3469999999999875443 222 27999999853 4 479999999998999886432 222 21 11
Q ss_pred CChh-----HHHHHHHHcCCCCCcEEEeeCCCccC
Q 046319 105 SDPS-----TKEIAEAYLGQALKNAVVTVPAYFND 134 (135)
Q Consensus 105 ~d~~-----lk~~Ae~~~g~~v~~vVItVPa~F~~ 134 (135)
+..+ +.+.+.........++|||||++|++
T Consensus 74 ~~~~~i~~~~l~~~~~~~~~~~~~~vitvP~~~~~ 108 (344)
T 1jce_A 74 TVALVMLRYFINKAKGGMNLFKPRVVIGVPIGITD 108 (344)
T ss_dssp HHHHHHHHHHHHHHHTSCCSCCCEEEEEECTTCCH
T ss_pred HHHHHHHHHHHHHHhhccccCCCeEEEEECCCCCH
Confidence 1111 22222221111247899999999985
No 11
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=97.87 E-value=3.4e-07 Score=72.68 Aligned_cols=101 Identities=11% Similarity=0.020 Sum_probs=52.1
Q ss_pred cccccccceEeccCCceEEEEEeCCeEEEEECCCCCeeeeEEEEEcCCeeE----ecHHHHHHHHc---CCCCceeec--
Q 046319 26 KRRRRVMKTWVSLFLISCVGVWKNDRVQIIANDQGNRTTPSYVAFTDTERL----IGDAAKNQVAT---NPQNTVFDA-- 96 (135)
Q Consensus 26 ~~~~~~i~gID~GTtns~vA~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~----vG~~A~~~~~~---~p~~~i~~~-- 96 (135)
++++..+.|||+|||++++++++++++++ +..|...+||.+. .++... +....++...+ ..++++..+
T Consensus 9 ~~~~~~~vgiDiGt~~i~~~~~~~~~~~i--~~~g~~~~ps~~~-~~g~i~d~~~~~~~ik~~~~~~~~~~~~v~~~i~~ 85 (377)
T 2ych_A 9 FRPRVEALGLEIGASALKLVEVSGNPPAL--KALASRPTPPGLL-MEGMVAEPAALAQEIKELLLEARTRKRYVVTALSN 85 (377)
T ss_dssp --CCCCCEEEEECSSEEEEEEEETTTTEE--EEEEEEECCTTSE-ETTEESCHHHHHHHHHHHHHHHTCCCCEEEEEECG
T ss_pred hcCCCceEEEEeCCCeEEEEEEeCCceEE--EEEEeEECCCCcc-cCCCcCCHHHHHHHHHHHHHHcCCCcceEEEEecC
Confidence 34455667799999999999988776554 2445666777543 222111 11111111111 111111110
Q ss_pred -----ccccCCCCCChh----HHHHHHHHcCCCCCcEEEeeC
Q 046319 97 -----KLLIRRRFSDPS----TKEIAEAYLGQALKNAVVTVP 129 (135)
Q Consensus 97 -----KrllG~~~~d~~----lk~~Ae~~~g~~v~~vVItVP 129 (135)
+.+-...+.+.+ ++..|+.+++.++.++||.+|
T Consensus 86 ~~~~~~~~~~~~v~~~el~~~i~~ea~~~~~~~~~~~vid~~ 127 (377)
T 2ych_A 86 LAVILRPIQVPKMPLKEMEEAVRWEAERYIPFPIDEVVLDFA 127 (377)
T ss_dssp GGCEEEEEEEECCCHHHHHHHHHHHHGGGCSSCC-CEEEEEE
T ss_pred CcEEEEEEECCCCCHHHHHHHHHHHHhhcCCCChhHceEEEE
Confidence 111111222222 555688889999999999997
No 12
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=97.82 E-value=9.5e-06 Score=65.41 Aligned_cols=87 Identities=22% Similarity=0.225 Sum_probs=52.4
Q ss_pred ceEeccCCceEEEEEeCCeEEEEECCCCCeeeeEEEEEcC------------------CeeEecHHHHHHHHcCCCCcee
Q 046319 33 KTWVSLFLISCVGVWKNDRVQIIANDQGNRTTPSYVAFTD------------------TERLIGDAAKNQVATNPQNTVF 94 (135)
Q Consensus 33 ~gID~GTtns~vA~~~~g~~~ii~n~~g~~~~PS~V~~~~------------------~~~~vG~~A~~~~~~~p~~~i~ 94 (135)
.+||+||+|+.+++..++.+.+ .+||+|.... ...+||++|... | + .
T Consensus 8 ivID~Gs~~~k~G~~~~~~p~~--------~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~----~-~--~ 72 (418)
T 1k8k_A 8 CVVDCGTGYTKLGYAGNTEPQF--------IIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEK----P-T--Y 72 (418)
T ss_dssp EEEEECSSEEEEEETTCSSCSE--------EEESCEEECC-----------CCCTTGGGCEEEGGGGTSC----T-T--S
T ss_pred EEEECCCCeEEEeeCCCCCCCC--------cCCceEEEECcccccccccccccccccccCeEEChHHHhc----C-C--C
Confidence 4589999999999875443332 3466666542 137899998765 2 2 4
Q ss_pred ecccccCCC-CCChh-----HHHHHHHHcCCC--CCcEEEeeCCCccC
Q 046319 95 DAKLLIRRR-FSDPS-----TKEIAEAYLGQA--LKNAVVTVPAYFND 134 (135)
Q Consensus 95 ~~KrllG~~-~~d~~-----lk~~Ae~~~g~~--v~~vVItVPa~F~~ 134 (135)
.+++-+.+. ..|-+ +...-.+.++.. ...+|||+|++|++
T Consensus 73 ~~~~pi~~G~i~d~d~~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~ 120 (418)
T 1k8k_A 73 ATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTP 120 (418)
T ss_dssp EEECCEETTEESCHHHHHHHHHHHHHTTTCCCGGGCCEEEEECTTCCH
T ss_pred EEeccccCCEECCHHHHHHHHHHHHHhccCCCCCCCcEEEEeCCCCCH
Confidence 555555443 12221 222223345433 35799999999874
No 13
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=97.81 E-value=2.6e-06 Score=67.68 Aligned_cols=33 Identities=18% Similarity=-0.083 Sum_probs=22.2
Q ss_pred cccceEeccCCceEEEEEeCCeEEEEECCCCCeeeeEEEEEcC
Q 046319 30 RVMKTWVSLFLISCVGVWKNDRVQIIANDQGNRTTPSYVAFTD 72 (135)
Q Consensus 30 ~~i~gID~GTtns~vA~~~~g~~~ii~n~~g~~~~PS~V~~~~ 72 (135)
+++.|||+||+|+.++. .+|. + ...||+|+...
T Consensus 21 m~~igiDlG~~~tkv~~-~~g~--~-------~~~PSvva~~~ 53 (346)
T 2fsj_A 21 MVVVGLDVGYGDTKVIG-VDGK--R-------IIFPSRWAVTE 53 (346)
T ss_dssp CEEEEEEECSSEEEEEC-GGGC--E-------EEEESCEEEEC
T ss_pred eEEEEEecCCcceeEEe-cCCC--E-------EEecceeeecc
Confidence 45568999999999874 2232 1 13488888763
No 14
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=97.70 E-value=7.3e-06 Score=65.41 Aligned_cols=96 Identities=13% Similarity=0.077 Sum_probs=51.3
Q ss_pred ceEeccCCceEEEEEeCCeEE-EEECCCCCeeeeEE-EEEcCCeeEecHHHHHHHHcCCCCceeecccccCCCC-CChh-
Q 046319 33 KTWVSLFLISCVGVWKNDRVQ-IIANDQGNRTTPSY-VAFTDTERLIGDAAKNQVATNPQNTVFDAKLLIRRRF-SDPS- 108 (135)
Q Consensus 33 ~gID~GTtns~vA~~~~g~~~-ii~n~~g~~~~PS~-V~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~-~d~~- 108 (135)
.+||+||+|+.+++..++.+. ++++--+....+++ +.+.+...++|.+|.... ....+++-+.+.. .|-+
T Consensus 8 ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~------~~~~~~~Pi~~G~i~d~d~ 81 (375)
T 2fxu_A 8 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR------GILTLKYPIEHGIITNWDD 81 (375)
T ss_dssp EEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHT------TSEEEECSEETTEECCHHH
T ss_pred EEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcC------cccceeccccCCcccCHHH
Confidence 458999999999987554433 34333222222211 112224578999998751 1245555554321 2222
Q ss_pred ----HHHHHHHHcCCCC--CcEEEeeCCCccC
Q 046319 109 ----TKEIAEAYLGQAL--KNAVVTVPAYFND 134 (135)
Q Consensus 109 ----lk~~Ae~~~g~~v--~~vVItVPa~F~~ 134 (135)
++..-.+.++... ..+|||+|+++++
T Consensus 82 ~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~ 113 (375)
T 2fxu_A 82 MEKIWHHTFYNELRVAPEEHPTLLTEAPLNPK 113 (375)
T ss_dssp HHHHHHHHHHTTSCCCGGGSCEEEEECTTCCH
T ss_pred HHHHHHHHHHHhcCCCCcCCcEEEEeCCCCcH
Confidence 2222234455433 4599999999874
No 15
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=96.83 E-value=0.0077 Score=45.13 Aligned_cols=26 Identities=27% Similarity=0.269 Sum_probs=20.8
Q ss_pred HHHHHHHHcCCCCCcEEEeeCCCccC
Q 046319 109 TKEIAEAYLGQALKNAVVTVPAYFND 134 (135)
Q Consensus 109 lk~~Ae~~~g~~v~~vVItVPa~F~~ 134 (135)
+++.++.+.+..+..+|+|+|++|++
T Consensus 80 ~~~~~~~~~~~~~~~~v~tvp~~~~~ 105 (272)
T 3h1q_A 80 LKAKVERLLGSELFQAATAIPPGTVG 105 (272)
T ss_dssp HHHHHHHHSSSCCCEEEEECCSCC--
T ss_pred HHHHHHHhcCCccCeEEEEcCCCCCH
Confidence 56677778888899999999999864
No 16
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=96.82 E-value=0.00018 Score=57.79 Aligned_cols=100 Identities=13% Similarity=0.008 Sum_probs=0.0
Q ss_pred ceEeccCCceEEEEEeCCeEE-EEECCCCCeeeeEEE---EEcCCeeEecHHHHHHHHcCCCCceeecccccCCCCCChh
Q 046319 33 KTWVSLFLISCVGVWKNDRVQ-IIANDQGNRTTPSYV---AFTDTERLIGDAAKNQVATNPQNTVFDAKLLIRRRFSDPS 108 (135)
Q Consensus 33 ~gID~GTtns~vA~~~~g~~~-ii~n~~g~~~~PS~V---~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~d~~ 108 (135)
.+||+||.++.+++..+..+. ++++--+....++.. .+.....++|.+|...- ..-...+-+++=+-..+++.+
T Consensus 9 ivID~Gs~~~k~G~ag~~~P~~~~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~~--~~~~~~~Pi~~G~i~dwd~~e 86 (394)
T 1k8k_B 9 VVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELR--SMLEVNYPMENGIVRNWDDMK 86 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEECCCCeEEEeeCCCCCcceeccceeEEEcccccccccCCCCCCeEEChHHHhcC--CCceeeccccCCEEecHHHHH
Confidence 358999999999887655444 344444443333322 12224567999887541 111122222322222344322
Q ss_pred --HHHHH-HHHcCCCC--CcEEEeeCCCccC
Q 046319 109 --TKEIA-EAYLGQAL--KNAVVTVPAYFND 134 (135)
Q Consensus 109 --lk~~A-e~~~g~~v--~~vVItVPa~F~~ 134 (135)
++..- .+.++... ..+|||+|++++.
T Consensus 87 ~i~~~~~~~~~L~~~~~~~~vllt~p~~~~~ 117 (394)
T 1k8k_B 87 HLWDYTFGPEKLNIDTRNCKILLTEPPMNPT 117 (394)
T ss_dssp -------------------------------
T ss_pred HHHHHHhcccccCcCCCCCcEEEEECCCCCH
Confidence 22222 23344322 3599999998764
No 17
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=96.68 E-value=0.00057 Score=53.15 Aligned_cols=24 Identities=0% Similarity=-0.316 Sum_probs=17.5
Q ss_pred cceEeccCCceEEEEE-eCCeEEEE
Q 046319 32 MKTWVSLFLISCVGVW-KNDRVQII 55 (135)
Q Consensus 32 i~gID~GTtns~vA~~-~~g~~~ii 55 (135)
+.||||||+|+++++. .+|.+..+
T Consensus 2 ~igiD~G~sntK~~~~~~~g~~~~~ 26 (320)
T 2zgy_A 2 LVFIDDGSTNIKLQWQESDGTIKQH 26 (320)
T ss_dssp EEEEEECSSEEEEEEECSSSCEEEE
T ss_pred eEEEecCCccceEEEecCCCEEEEE
Confidence 4579999999999885 45654433
No 18
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=96.16 E-value=0.0026 Score=48.20 Aligned_cols=21 Identities=14% Similarity=-0.254 Sum_probs=17.8
Q ss_pred ccceEeccCCceEEEEEeCCe
Q 046319 31 VMKTWVSLFLISCVGVWKNDR 51 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~~g~ 51 (135)
.++|||+|||+|.+|++++++
T Consensus 2 ~~lGID~GsT~tk~av~d~~~ 22 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILKNGE 22 (276)
T ss_dssp EEEEEEECSSCEEEEEEETTT
T ss_pred eEEEEEcCccEEEEEEEECCC
Confidence 467899999999999997664
No 19
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=94.14 E-value=0.066 Score=43.41 Aligned_cols=78 Identities=10% Similarity=-0.040 Sum_probs=45.9
Q ss_pred cccccceEeccCCceEEEEEeC--CeEEEEECCCCCeeeeEEEEEcCCeeEecHHHHHHHHcCCCCceeecccccCCCCC
Q 046319 28 RRRVMKTWVSLFLISCVGVWKN--DRVQIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVATNPQNTVFDAKLLIRRRFS 105 (135)
Q Consensus 28 ~~~~i~gID~GTtns~vA~~~~--g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~ 105 (135)
++..+.|||+||+..++.+.+. +..+++.. ...||- .+. ++.++-..+ +...+|+
T Consensus 6 ~~~~ivglDIGts~I~~vv~~~~~~~~~i~g~----~~~~s~-gv~-~G~I~di~~----------~~~~I~~------- 62 (419)
T 4a2a_A 6 KTVFYTSIDIGSRYIKGLVLGKRDQEWEALAF----SSVKSR-GLD-EGEIKDAIA----------FKESVNT------- 62 (419)
T ss_dssp -CCEEEEEEECSSEEEEEEEEC----CEEEEE----EEEECC-SEE-TTEESBHHH----------HHHHHHH-------
T ss_pred cCCEEEEEEccCCEEEEEEEEEcCCCCEEEEE----EEeccC-Cee-CCEEEcHHH----------HHHHHHH-------
Confidence 3567778999999999877642 12233321 122321 111 123332222 2233333
Q ss_pred ChhHHHHHHHHcCCCCCc-EEEeeCCC
Q 046319 106 DPSTKEIAEAYLGQALKN-AVVTVPAY 131 (135)
Q Consensus 106 d~~lk~~Ae~~~g~~v~~-vVItVPa~ 131 (135)
+++.||..+|.++++ |++++|..
T Consensus 63 ---av~~ae~~~g~~i~~~v~v~i~g~ 86 (419)
T 4a2a_A 63 ---LLKELEEQLQKSLRSDFVISFSSV 86 (419)
T ss_dssp ---HHHHHHHHHTSCCCSEEEEEECCT
T ss_pred ---HHHHHHHHcCCCcCceEEEEEcCC
Confidence 567889999999999 99999986
No 20
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=91.26 E-value=0.14 Score=42.64 Aligned_cols=42 Identities=12% Similarity=0.024 Sum_probs=29.9
Q ss_pred ceEeccCCceEEEEEeCCeEEEEECCCCCeeeeEEEEEcC----CeeEecHHHH
Q 046319 33 KTWVSLFLISCVGVWKNDRVQIIANDQGNRTTPSYVAFTD----TERLIGDAAK 82 (135)
Q Consensus 33 ~gID~GTtns~vA~~~~g~~~ii~n~~g~~~~PS~V~~~~----~~~~vG~~A~ 82 (135)
++||+||.++.+.+..++.+.+ .+||+|.... ...+||..|.
T Consensus 26 iVID~GS~~~kaG~ag~~~P~~--------v~PSvVg~~~~~~~~~~~vG~e~~ 71 (498)
T 3qb0_A 26 VVIDPGSYTTNIGYSGSDFPQS--------ILPSVYGKYTADEGNKKIFSEQSI 71 (498)
T ss_dssp EEEECCSSEEEEEETTCSSCSE--------EEESEEEEESSCSSCCEECCTTGG
T ss_pred EEEECCCcEEEEEECCCCCeee--------ecCceeEEeccCCCccEEEecHHH
Confidence 4589999999998765553433 3599999863 3568998643
No 21
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=90.75 E-value=0.11 Score=43.28 Aligned_cols=26 Identities=8% Similarity=-0.132 Sum_probs=20.3
Q ss_pred cceEeccCCceEEEEEeCCeEEEEEC
Q 046319 32 MKTWVSLFLISCVGVWKNDRVQIIAN 57 (135)
Q Consensus 32 i~gID~GTtns~vA~~~~g~~~ii~n 57 (135)
|..||-|+.|+.+.+..+..|.+|++
T Consensus 17 iIVIdpGS~~~riG~A~d~~P~~iP~ 42 (593)
T 4fo0_A 17 IIVIHPGSTTLRIGRATDTLPASIPH 42 (593)
T ss_dssp EEEEECCSSEEEEEETTCSSCEEEEC
T ss_pred EEEEeCCCCCeEeeecCCCCCCeeeE
Confidence 44489999999999987776666653
No 22
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=88.80 E-value=0.27 Score=40.72 Aligned_cols=23 Identities=13% Similarity=-0.058 Sum_probs=18.7
Q ss_pred ccccceEeccCCceEEEEEe--CCe
Q 046319 29 RRVMKTWVSLFLISCVGVWK--NDR 51 (135)
Q Consensus 29 ~~~i~gID~GTtns~vA~~~--~g~ 51 (135)
..+++|||+|||++.+++++ +|+
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~~G~ 28 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTDAETGE 28 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEETTTCC
T ss_pred CcEEEEEEeccccEEEEEEECCCCe
Confidence 34667899999999999998 454
No 23
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=88.48 E-value=0.27 Score=40.75 Aligned_cols=22 Identities=9% Similarity=-0.121 Sum_probs=17.8
Q ss_pred cccceEeccCCceEEEEEe-CCe
Q 046319 30 RVMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 30 ~~i~gID~GTtns~vA~~~-~g~ 51 (135)
.+++|||+|||++.+++++ +|+
T Consensus 4 kYvlgID~GTss~Ka~l~d~~G~ 26 (526)
T 3ezw_A 4 KYIVALDQGTTSSRAVVMDHDAN 26 (526)
T ss_dssp CEEEEEEECSSEEEEEEECTTCC
T ss_pred eEEEEEEccccceeeeEEcCCCC
Confidence 4567799999999999985 454
No 24
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=87.25 E-value=0.41 Score=36.59 Aligned_cols=22 Identities=14% Similarity=0.022 Sum_probs=18.8
Q ss_pred ccceEeccCCceEEEEEeCCeE
Q 046319 31 VMKTWVSLFLISCVGVWKNDRV 52 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~~g~~ 52 (135)
++++||.|+||++.+++++++.
T Consensus 3 MlL~IDIGNT~iK~gl~d~~~l 24 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDGDEI 24 (266)
T ss_dssp CEEEEEECSSEEEEEEEETTEE
T ss_pred eEEEEEECCCeEEEEEEECCEE
Confidence 4677999999999999988753
No 25
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=86.96 E-value=0.45 Score=36.02 Aligned_cols=21 Identities=10% Similarity=-0.255 Sum_probs=17.4
Q ss_pred ccceEeccCCceEEEEEeC-Ce
Q 046319 31 VMKTWVSLFLISCVGVWKN-DR 51 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~~-g~ 51 (135)
+.+|||+|+|++.++++++ |+
T Consensus 4 ~~lGiD~Gst~~k~~l~d~~g~ 25 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILKDGKE 25 (270)
T ss_dssp EEEEEEECSSEEEEEEEETTTE
T ss_pred EEEEEEeccceEEEEEEeCCCC
Confidence 4568999999999999974 54
No 26
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=85.09 E-value=0.57 Score=38.90 Aligned_cols=22 Identities=14% Similarity=-0.106 Sum_probs=18.3
Q ss_pred cccceEeccCCceEEEEEe-CCe
Q 046319 30 RVMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 30 ~~i~gID~GTtns~vA~~~-~g~ 51 (135)
.+++|||+|||++.+++++ +|+
T Consensus 10 ~~~lgID~GTts~Ka~l~d~~G~ 32 (538)
T 4bc3_A 10 RCCLGWDFSTQQVKVVAVDAELN 32 (538)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC
T ss_pred CEEEEEEEcCcCEEEEEECCCCC
Confidence 4678899999999999996 444
No 27
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=84.85 E-value=0.63 Score=38.34 Aligned_cols=22 Identities=9% Similarity=-0.179 Sum_probs=18.1
Q ss_pred cccceEeccCCceEEEEEe-CCe
Q 046319 30 RVMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 30 ~~i~gID~GTtns~vA~~~-~g~ 51 (135)
.+++|||+|||++.+++++ +|+
T Consensus 7 ~~~lgIDiGtts~k~~l~d~~G~ 29 (508)
T 3ifr_A 7 RQVIGLDIGTTSTIAILVRLPDT 29 (508)
T ss_dssp CEEEEEEECSSEEEEEEEETTTE
T ss_pred CEEEEEEecCcceEEEEECCCCC
Confidence 4567799999999999996 454
No 28
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=84.35 E-value=0.72 Score=37.94 Aligned_cols=22 Identities=9% Similarity=-0.070 Sum_probs=17.8
Q ss_pred cccceEeccCCceEEEEEe-CCe
Q 046319 30 RVMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 30 ~~i~gID~GTtns~vA~~~-~g~ 51 (135)
.+++|||+|||++.+++++ +|+
T Consensus 5 ~~~lgIDiGtts~k~~l~d~~G~ 27 (506)
T 3h3n_X 5 NYVMAIDQGTTSSRAIIFDRNGK 27 (506)
T ss_dssp CEEEEEEECSSEEEEEEEETTSC
T ss_pred CEEEEEEcCCCceEEEEECCCCC
Confidence 3567799999999999996 454
No 29
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=83.98 E-value=0.65 Score=38.85 Aligned_cols=23 Identities=4% Similarity=-0.312 Sum_probs=18.2
Q ss_pred cccceEeccCCceEEEEEe--CCeE
Q 046319 30 RVMKTWVSLFLISCVGVWK--NDRV 52 (135)
Q Consensus 30 ~~i~gID~GTtns~vA~~~--~g~~ 52 (135)
.+++|||+|||++.+++++ +|++
T Consensus 5 ~~~lgIDiGTts~Ka~l~d~~~G~i 29 (572)
T 3jvp_A 5 KYTIGVDYGTESGRAVLIDLSNGQE 29 (572)
T ss_dssp CEEEEEEECSSEEEEEEEETTTCCE
T ss_pred CEEEEEecCCcceEEEEEECCCCeE
Confidence 3567799999999999996 4543
No 30
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=83.73 E-value=0.57 Score=38.60 Aligned_cols=21 Identities=10% Similarity=-0.170 Sum_probs=17.4
Q ss_pred ccceEeccCCceEEEEEe-CCe
Q 046319 31 VMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~-~g~ 51 (135)
+++|||+|||++.+++++ +|+
T Consensus 4 ~~lgIDiGtts~k~~l~d~~G~ 25 (510)
T 2p3r_A 4 YIVALDQGTTSSRAVVMDHDAN 25 (510)
T ss_dssp EEEEEEECSSEEEEEEECTTCC
T ss_pred EEEEEEcCCcceEEEEECCCCC
Confidence 467799999999999996 454
No 31
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=83.65 E-value=0.86 Score=34.76 Aligned_cols=20 Identities=10% Similarity=0.037 Sum_probs=17.6
Q ss_pred cceEeccCCceEEEEEeCCe
Q 046319 32 MKTWVSLFLISCVGVWKNDR 51 (135)
Q Consensus 32 i~gID~GTtns~vA~~~~g~ 51 (135)
++.||.|+||++.+++++++
T Consensus 2 lL~IDIGNT~ik~gl~~~~~ 21 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEGE 21 (268)
T ss_dssp EEEEEECSSEEEEEEEETTE
T ss_pred EEEEEECcCcEEEEEEECCE
Confidence 45699999999999999875
No 32
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=83.62 E-value=0.69 Score=38.47 Aligned_cols=22 Identities=14% Similarity=-0.052 Sum_probs=17.9
Q ss_pred cccceEeccCCceEEEEEe-CCe
Q 046319 30 RVMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 30 ~~i~gID~GTtns~vA~~~-~g~ 51 (135)
.+++|||+|||++.+++++ +|+
T Consensus 5 ~~~lgIDiGtts~ka~l~d~~G~ 27 (554)
T 3l0q_A 5 SYFIGVDVGTGSARAGVFDLQGR 27 (554)
T ss_dssp CEEEEEEECSSEEEEEEEETTSC
T ss_pred cEEEEEEECcccEEEEEECCCCC
Confidence 3567799999999999996 454
No 33
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=82.52 E-value=0.69 Score=38.06 Aligned_cols=21 Identities=19% Similarity=0.178 Sum_probs=16.9
Q ss_pred ccceEeccCCceEEEEEe-CCe
Q 046319 31 VMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~-~g~ 51 (135)
+++|||+|||++.+++++ +|+
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~G~ 28 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLDGR 28 (482)
T ss_dssp -CEEEEECSSEEEEEEECTTSC
T ss_pred eEEEEEcCCCCeEEEEEECCCc
Confidence 467799999999999996 454
No 34
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=82.35 E-value=0.67 Score=38.03 Aligned_cols=21 Identities=5% Similarity=-0.160 Sum_probs=17.4
Q ss_pred ccceEeccCCceEEEEEe-CCe
Q 046319 31 VMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~-~g~ 51 (135)
+++|||+|||++.+++++ +|+
T Consensus 7 ~~lgIDiGtts~k~~l~d~~G~ 28 (501)
T 3g25_A 7 YILSIDQGTTSSRAILFNQKGE 28 (501)
T ss_dssp EEEEEEECSSEEEEEEECTTSC
T ss_pred EEEEEEeCccceEEEEEcCCCC
Confidence 567799999999999996 454
No 35
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=82.24 E-value=0.75 Score=37.70 Aligned_cols=21 Identities=10% Similarity=-0.126 Sum_probs=17.3
Q ss_pred ccceEeccCCceEEEEEe-CCe
Q 046319 31 VMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~-~g~ 51 (135)
+++|||+|||++.+++++ +|+
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~g~ 26 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEELN 26 (503)
T ss_dssp EEEEEEECSSEEEEEEEETTCC
T ss_pred EEEEEEeCCcceEEEEECCCCC
Confidence 467799999999999996 444
No 36
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=82.17 E-value=0.81 Score=37.63 Aligned_cols=21 Identities=5% Similarity=-0.160 Sum_probs=17.3
Q ss_pred ccceEeccCCceEEEEEe-CCe
Q 046319 31 VMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~-~g~ 51 (135)
+++|||+|||++.+++++ +|+
T Consensus 5 ~~lgIDiGtts~K~~l~d~~G~ 26 (504)
T 3ll3_A 5 YIIGMDVGTTATKGVLYDINGK 26 (504)
T ss_dssp EEEEEEECSSEEEEEEEETTSC
T ss_pred EEEEEEecCCceEEEEEcCCCC
Confidence 467799999999999996 444
No 37
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=82.06 E-value=0.81 Score=37.81 Aligned_cols=21 Identities=10% Similarity=-0.069 Sum_probs=17.4
Q ss_pred ccceEeccCCceEEEEEe-CCe
Q 046319 31 VMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~-~g~ 51 (135)
+++|||+|||++.+++++ +|+
T Consensus 27 ~~lgIDiGtts~k~~l~d~~G~ 48 (520)
T 4e1j_A 27 YILAIDQGTTSTRAIVFDGNQK 48 (520)
T ss_dssp EEEEEEECSSEEEEEEECTTSC
T ss_pred eEEEEEeCCcceEEEEECCCCC
Confidence 467899999999999996 454
No 38
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=81.87 E-value=0.71 Score=38.04 Aligned_cols=21 Identities=5% Similarity=-0.178 Sum_probs=17.3
Q ss_pred ccceEeccCCceEEEEEe-CCe
Q 046319 31 VMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~-~g~ 51 (135)
+++|||+|||++.+++++ +|+
T Consensus 6 ~~lgIDiGtts~k~~l~d~~G~ 27 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALADRDGG 27 (511)
T ss_dssp EEEEEEECSSEEEEEEECTTSC
T ss_pred EEEEEEeCCCceEEEEECCCCC
Confidence 467799999999999986 454
No 39
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=81.44 E-value=1.8 Score=30.51 Aligned_cols=25 Identities=8% Similarity=0.093 Sum_probs=19.1
Q ss_pred ccceEeccCCceEEEEEe--CCeEEEE
Q 046319 31 VMKTWVSLFLISCVGVWK--NDRVQII 55 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~--~g~~~ii 55 (135)
.|+|||.|++++-.++.+ ++++.++
T Consensus 2 ~ILGIDPGl~~tG~gvi~~~g~~~~~v 28 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQVGRQLSYL 28 (158)
T ss_dssp EEEEEECCSSEEEEEEEEEETTEEEEE
T ss_pred EEEEEccCCCCeeEEEEEecCCeEEEE
Confidence 367899999999999984 4455544
No 40
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=81.41 E-value=0.76 Score=37.40 Aligned_cols=18 Identities=6% Similarity=-0.429 Sum_probs=15.6
Q ss_pred ccceEeccCCceEEEEEe
Q 046319 31 VMKTWVSLFLISCVGVWK 48 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~ 48 (135)
+++|||+|||++.+++++
T Consensus 5 ~~lgiDiGtts~k~~l~d 22 (489)
T 2uyt_A 5 NCVAVDLGASSGRVMLAR 22 (489)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEE
Confidence 356799999999999985
No 41
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=81.03 E-value=0.81 Score=37.44 Aligned_cols=21 Identities=0% Similarity=-0.133 Sum_probs=17.3
Q ss_pred ccceEeccCCceEEEEEe-CCe
Q 046319 31 VMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~-~g~ 51 (135)
+++|||+|||++.+++++ +|+
T Consensus 4 ~~lgiDiGtt~~k~~l~d~~g~ 25 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDRESN 25 (497)
T ss_dssp EEEEEEECSSEEEEEEECTTCC
T ss_pred EEEEEecCCchhEEEEECCCCC
Confidence 467799999999999996 454
No 42
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=80.85 E-value=0.82 Score=37.40 Aligned_cols=21 Identities=10% Similarity=-0.075 Sum_probs=17.1
Q ss_pred ccceEeccCCceEEEEEe-CCe
Q 046319 31 VMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~-~g~ 51 (135)
+++|||+|||++.+++++ +|+
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~g~ 24 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLEGR 24 (495)
T ss_dssp CEEEEEECSSEEEEEEECTTSC
T ss_pred EEEEEeeCCcceEEEEECCCCC
Confidence 356799999999999996 454
No 43
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=80.46 E-value=0.86 Score=37.11 Aligned_cols=20 Identities=5% Similarity=-0.416 Sum_probs=16.5
Q ss_pred cceEeccCCceEEEEEe-CCe
Q 046319 32 MKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 32 i~gID~GTtns~vA~~~-~g~ 51 (135)
++|||+|||++.+++++ +|+
T Consensus 2 ~lgiDiGtt~~k~~l~d~~g~ 22 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQGE 22 (484)
T ss_dssp EEEEEECSSEEEEEEECTTSC
T ss_pred EEEEEecCcccEEEEECCCCC
Confidence 46799999999999996 454
No 44
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=80.18 E-value=0.9 Score=34.20 Aligned_cols=21 Identities=5% Similarity=-0.171 Sum_probs=18.0
Q ss_pred ccceEeccCCceEEEEEeCCe
Q 046319 31 VMKTWVSLFLISCVGVWKNDR 51 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~~g~ 51 (135)
+++.||.|+||++.|++++++
T Consensus 4 M~L~IDIGNT~ik~gl~~~~~ 24 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITEDGK 24 (249)
T ss_dssp EEEEEEECSSEEEEEEESSSS
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 567799999999999998664
No 45
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=79.17 E-value=1.1 Score=31.35 Aligned_cols=19 Identities=5% Similarity=-0.312 Sum_probs=16.4
Q ss_pred ccceEeccCCceEEEEEeC
Q 046319 31 VMKTWVSLFLISCVGVWKN 49 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~~ 49 (135)
.|+|||+|+..|-+|+.+.
T Consensus 4 riLGiDpG~~riGvAv~d~ 22 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDE 22 (150)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEEccCCEEEEEEEEC
Confidence 4678999999999999864
No 46
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=78.95 E-value=1 Score=36.90 Aligned_cols=21 Identities=10% Similarity=-0.167 Sum_probs=17.2
Q ss_pred ccceEeccCCceEEEEEe-CCe
Q 046319 31 VMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~-~g~ 51 (135)
+++|||+|||++.+++++ +|+
T Consensus 3 ~~lgiDiGtts~k~~l~d~~G~ 24 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHSGE 24 (504)
T ss_dssp EEEEEEECSSEEEEEEECTTSC
T ss_pred EEEEEecCCcceEEEEECCCCC
Confidence 456799999999999996 454
No 47
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=78.00 E-value=1.6 Score=32.95 Aligned_cols=20 Identities=10% Similarity=-0.253 Sum_probs=16.6
Q ss_pred cceEeccCCceEEEEEeCCe
Q 046319 32 MKTWVSLFLISCVGVWKNDR 51 (135)
Q Consensus 32 i~gID~GTtns~vA~~~~g~ 51 (135)
++|||.|.|++.++++++|+
T Consensus 2 ~lgiDiGGT~~~~~l~d~g~ 21 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAKEGK 21 (291)
T ss_dssp EEEEEECSSEEEEEEEETTE
T ss_pred EEEEEeCccceEEEEEeCCe
Confidence 45799999999999988553
No 48
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=77.87 E-value=1.3 Score=28.74 Aligned_cols=18 Identities=6% Similarity=-0.282 Sum_probs=15.8
Q ss_pred cceEeccCCceEEEEEeC
Q 046319 32 MKTWVSLFLISCVGVWKN 49 (135)
Q Consensus 32 i~gID~GTtns~vA~~~~ 49 (135)
++|||+|+..+-+|+.+.
T Consensus 3 iLglD~G~kriGvAvsd~ 20 (98)
T 1iv0_A 3 VGALDVGEARIGLAVGEE 20 (98)
T ss_dssp EEEEEESSSEEEEEEECS
T ss_pred EEEEEeCCCEEEEEEEeC
Confidence 567999999999999864
No 49
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=77.28 E-value=2 Score=32.94 Aligned_cols=23 Identities=9% Similarity=-0.155 Sum_probs=19.0
Q ss_pred cccceEeccCCceEEEEEe-CCeE
Q 046319 30 RVMKTWVSLFLISCVGVWK-NDRV 52 (135)
Q Consensus 30 ~~i~gID~GTtns~vA~~~-~g~~ 52 (135)
.+++.||.|+||++.++++ +++.
T Consensus 23 ~M~L~IDiGNT~ik~g~~~~~~~~ 46 (271)
T 2f9w_A 23 SMILELDCGNSLIKWRVIEGAARS 46 (271)
T ss_dssp CEEEEEEECSSCEEEEEEETTTEE
T ss_pred CcEEEEEeCCCeeEEEEEeCCCEE
Confidence 3567799999999999998 7653
No 50
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=75.37 E-value=1.5 Score=33.08 Aligned_cols=20 Identities=15% Similarity=-0.320 Sum_probs=15.5
Q ss_pred cceEeccCCceEEEEEeCCe
Q 046319 32 MKTWVSLFLISCVGVWKNDR 51 (135)
Q Consensus 32 i~gID~GTtns~vA~~~~g~ 51 (135)
++|||+|.|++.++++++|+
T Consensus 2 ~lgiDiGGT~i~~~l~d~g~ 21 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVLNGA 21 (291)
T ss_dssp --CEECCTTCEEEEEECSSS
T ss_pred EEEEEeccccEEEEEEcCCe
Confidence 45699999999999987443
No 51
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=73.58 E-value=2.6 Score=29.04 Aligned_cols=19 Identities=11% Similarity=-0.227 Sum_probs=16.5
Q ss_pred cceEeccCCceEEEEEeCC
Q 046319 32 MKTWVSLFLISCVGVWKND 50 (135)
Q Consensus 32 i~gID~GTtns~vA~~~~g 50 (135)
++|||+|+..+-||+.+..
T Consensus 5 iLglD~G~kriGvAvsd~~ 23 (138)
T 1nu0_A 5 LMAFDFGTKSIGVAVGQRI 23 (138)
T ss_dssp EEEEECCSSEEEEEEEETT
T ss_pred EEEEEeCCCEEEEEEEcCC
Confidence 5679999999999998753
No 52
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=73.50 E-value=3.3 Score=29.45 Aligned_cols=18 Identities=17% Similarity=-0.053 Sum_probs=15.8
Q ss_pred ccceEeccCCceEEEEEe
Q 046319 31 VMKTWVSLFLISCVGVWK 48 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~ 48 (135)
.|+|||.|++++-.++.+
T Consensus 2 rILGIDPGl~~tG~gvi~ 19 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVA 19 (166)
T ss_dssp EEEEEECCSSEEEEEEEE
T ss_pred EEEEEccccCceEEEEEE
Confidence 467899999999999984
No 53
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=73.35 E-value=2.6 Score=31.92 Aligned_cols=21 Identities=0% Similarity=-0.281 Sum_probs=17.3
Q ss_pred ccceEeccCCceEEEEEe-CCe
Q 046319 31 VMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~-~g~ 51 (135)
+++|||+|.|++.+++++ +|+
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~G~ 33 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASDGT 33 (305)
T ss_dssp EEEEEEECSSCEEEEEEETTCC
T ss_pred EEEEEEcCccceEEEEEcCCCC
Confidence 457799999999999987 454
No 54
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=71.90 E-value=0.74 Score=35.75 Aligned_cols=53 Identities=15% Similarity=0.040 Sum_probs=29.4
Q ss_pred cccceEeccCCceEEEEE-eCC-----eEEEEECCCCC--------eeeeEEEEEcCCeeEecHHHH
Q 046319 30 RVMKTWVSLFLISCVGVW-KND-----RVQIIANDQGN--------RTTPSYVAFTDTERLIGDAAK 82 (135)
Q Consensus 30 ~~i~gID~GTtns~vA~~-~~g-----~~~ii~n~~g~--------~~~PS~V~~~~~~~~vG~~A~ 82 (135)
.++.|||+|..|+.++.. .+| +....+.--+. ....-.|.|.+...++|+.|.
T Consensus 7 ~~iigiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~~~~~~~~~v~~~G~~Y~vG~~a~ 73 (329)
T 4apw_A 7 EYVMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYIDIEGNSHKIELDGKEYLIGEQGV 73 (329)
T ss_dssp EEEEEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESCCCCCSCEEEECSSSEEEESCCSS
T ss_pred ceEEEEecCCceEEEEeccCCCcccceeEEeecccccccccccccCCCCceEEEECCEEEEeCcccc
Confidence 456679999999999863 221 11122211000 001224666677888998764
No 55
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=69.80 E-value=2.7 Score=32.40 Aligned_cols=22 Identities=0% Similarity=-0.292 Sum_probs=17.8
Q ss_pred ccceEeccCCceEEEEEeCCeE
Q 046319 31 VMKTWVSLFLISCVGVWKNDRV 52 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~~g~~ 52 (135)
...|||.|+|.+.+++++++++
T Consensus 21 ~~iGIDiGsTt~K~V~~~~~~i 42 (287)
T 2ews_A 21 MKVGIDAGGTLIKIVQEQDNQR 42 (287)
T ss_dssp CEEEEEECSSEEEEEEECSSCE
T ss_pred eEEEEEEChhhEEEEEEcCCEE
Confidence 3457999999999999877653
No 56
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=63.77 E-value=3.9 Score=31.39 Aligned_cols=22 Identities=5% Similarity=-0.378 Sum_probs=17.7
Q ss_pred cccceEeccCCceEEEEEe-CCe
Q 046319 30 RVMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 30 ~~i~gID~GTtns~vA~~~-~g~ 51 (135)
.+++|||+|+|++.+++++ +|+
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~~G~ 52 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSMKGE 52 (343)
T ss_dssp EEEEEEEECSSEEEEEEEETTSC
T ss_pred cEEEEEEECCCEEEEEEECCCCc
Confidence 4567799999999999986 454
No 57
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=63.20 E-value=4.2 Score=30.70 Aligned_cols=23 Identities=9% Similarity=-0.148 Sum_probs=17.9
Q ss_pred ccccceEeccCCceEEEEEe-CCe
Q 046319 29 RRVMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 29 ~~~i~gID~GTtns~vA~~~-~g~ 51 (135)
.+.++|||+|.|++.+++++ +|.
T Consensus 3 ~m~~lgiDiGgt~i~~~l~d~~G~ 26 (297)
T 4htl_A 3 AMKIAAFDIGGTALKMGVVLPHGE 26 (297)
T ss_dssp -CCEEEEEECSSEEEEEEECTTSC
T ss_pred ccEEEEEEeCCCeEEEEEECCCCC
Confidence 34567899999999999986 454
No 58
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=62.39 E-value=4.3 Score=30.75 Aligned_cols=20 Identities=10% Similarity=-0.127 Sum_probs=16.6
Q ss_pred ccceEeccCCceEEEEEeCC
Q 046319 31 VMKTWVSLFLISCVGVWKND 50 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~~g 50 (135)
+++|||+|.|++.+++++.+
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~ 21 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGK 21 (302)
T ss_dssp CEEEEEECSSEEEEEEECSS
T ss_pred EEEEEEEcCCEEEEEEEeCC
Confidence 45679999999999998644
No 59
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=60.86 E-value=5 Score=30.02 Aligned_cols=20 Identities=0% Similarity=-0.266 Sum_probs=16.5
Q ss_pred cceEeccCCceEEEEEe-CCe
Q 046319 32 MKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 32 i~gID~GTtns~vA~~~-~g~ 51 (135)
++|||+|+|++.+++++ +|+
T Consensus 4 ~lgiDiGgt~~~~~l~d~~g~ 24 (299)
T 2e2o_A 4 IVGVDAGGTKTKAVAYDCEGN 24 (299)
T ss_dssp EEEEEECSSCEEEEEECTTSC
T ss_pred EEEEEeCCCcEEEEEEcCCCC
Confidence 56799999999999986 454
No 60
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=59.17 E-value=6.1 Score=30.11 Aligned_cols=21 Identities=10% Similarity=-0.222 Sum_probs=17.1
Q ss_pred ccceEeccCCceEEEEEe-CCe
Q 046319 31 VMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~-~g~ 51 (135)
+++|||+|+|++.+++++ +|+
T Consensus 7 ~~lgiDiGgt~~~~~l~d~~g~ 28 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSEDGK 28 (347)
T ss_dssp EEEEEEECTTCEEEEEEETTSC
T ss_pred EEEEEEcCccceEEEEEeCCCC
Confidence 456799999999999986 454
No 61
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=58.48 E-value=6.1 Score=30.56 Aligned_cols=21 Identities=10% Similarity=0.050 Sum_probs=18.5
Q ss_pred ccceEeccCCceEEEEEeCCe
Q 046319 31 VMKTWVSLFLISCVGVWKNDR 51 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~~g~ 51 (135)
.++|||-++..+++|++++++
T Consensus 2 ~iLgIdts~~~~~val~~~g~ 22 (330)
T 2ivn_A 2 LALGIEGTAHTLGIGIVSEDK 22 (330)
T ss_dssp CEEEEECSSSEEEEEEECSSC
T ss_pred EEEEEEccCCCeEEEEEECCE
Confidence 468899999999999998874
No 62
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=55.91 E-value=5.4 Score=29.71 Aligned_cols=22 Identities=5% Similarity=-0.293 Sum_probs=17.4
Q ss_pred cccceEeccCCceEEEEEe-CCe
Q 046319 30 RVMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 30 ~~i~gID~GTtns~vA~~~-~g~ 51 (135)
+.++|||+|.|++.+++++ +|+
T Consensus 4 m~~lgidiggt~i~~~l~d~~g~ 26 (292)
T 2gup_A 4 MTIATIDIGGTGIKFASLTPDGK 26 (292)
T ss_dssp CCEEEEEEETTEEEEEEECTTCC
T ss_pred cEEEEEEECCCEEEEEEECCCCC
Confidence 3357799999999999986 454
No 63
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=55.72 E-value=6.7 Score=29.82 Aligned_cols=22 Identities=5% Similarity=-0.167 Sum_probs=17.7
Q ss_pred cccceEeccCCceEEEEEe-CCe
Q 046319 30 RVMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 30 ~~i~gID~GTtns~vA~~~-~g~ 51 (135)
++++|||+|.|+..+++++ +|+
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~~G~ 25 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGREDGT 25 (302)
T ss_dssp CCEEEEEECSSEEEEEEECTTSC
T ss_pred cEEEEEEECcceeEEEEEECCCc
Confidence 4566799999999999986 454
No 64
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=55.19 E-value=7.5 Score=29.71 Aligned_cols=23 Identities=0% Similarity=-0.226 Sum_probs=18.1
Q ss_pred cccceEeccCCceEEEEEe--CCeE
Q 046319 30 RVMKTWVSLFLISCVGVWK--NDRV 52 (135)
Q Consensus 30 ~~i~gID~GTtns~vA~~~--~g~~ 52 (135)
.+++|||+|.|++.+++++ ++.+
T Consensus 14 ~~~lgiDiGGT~i~~~l~dl~~g~i 38 (332)
T 1sz2_A 14 KYALVGDVGGTNARLALCDIASGEI 38 (332)
T ss_dssp CEEEEEEEETTEEEEEEEETTTCCE
T ss_pred CEEEEEEechhheEEEEEECCCCcE
Confidence 4456799999999999997 3543
No 65
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=54.47 E-value=7.1 Score=29.38 Aligned_cols=21 Identities=0% Similarity=-0.344 Sum_probs=17.1
Q ss_pred ccceEeccCCceEEEEEe-CCe
Q 046319 31 VMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~-~g~ 51 (135)
.++|||+|+|++.+++++ +|.
T Consensus 7 ~~lgiDiggt~~~~~l~d~~g~ 28 (326)
T 2qm1_A 7 KIIGIDLGGTTIKFAILTTDGV 28 (326)
T ss_dssp EEEEEEECSSEEEEEEEETTCC
T ss_pred EEEEEEECCCEEEEEEECCCCC
Confidence 456799999999999986 444
No 66
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=54.13 E-value=11 Score=29.80 Aligned_cols=24 Identities=8% Similarity=-0.067 Sum_probs=18.8
Q ss_pred cccccceEeccCCceEEEEEeCCe
Q 046319 28 RRRVMKTWVSLFLISCVGVWKNDR 51 (135)
Q Consensus 28 ~~~~i~gID~GTtns~vA~~~~g~ 51 (135)
...+++|||+|.|++.++++++|+
T Consensus 7 d~~~~lgiDIGgt~i~~~l~d~G~ 30 (366)
T 3mcp_A 7 DNRIVMTLDAGGTNFVFSAIQGGK 30 (366)
T ss_dssp CCCEEEEEECSSSEEEEEEEETTE
T ss_pred CCCEEEEEEECcceEEEEEEECCE
Confidence 344566799999999999988543
No 67
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=53.86 E-value=7.3 Score=29.66 Aligned_cols=18 Identities=11% Similarity=-0.285 Sum_probs=15.6
Q ss_pred ccceEeccCCceEEEEEe
Q 046319 31 VMKTWVSLFLISCVGVWK 48 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~ 48 (135)
+++|||+|+|++.+++++
T Consensus 3 ~~lgiDiGgt~i~~~l~d 20 (321)
T 3vgl_A 3 LTIGVDIGGTKIAAGVVD 20 (321)
T ss_dssp EEEEEEECSSEEEEEEEC
T ss_pred EEEEEEECCCEEEEEEEC
Confidence 356799999999999986
No 68
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=52.48 E-value=8.4 Score=29.47 Aligned_cols=22 Identities=5% Similarity=-0.180 Sum_probs=17.7
Q ss_pred cccceEeccCCceEEEEEe-CCe
Q 046319 30 RVMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 30 ~~i~gID~GTtns~vA~~~-~g~ 51 (135)
.+++|||+|.|++.+++++ +|+
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~~G~ 46 (327)
T 4db3_A 24 AMYYGFDVGGTKIEFGAFNEKLE 46 (327)
T ss_dssp CCEEEEEECSSEEEEEEECTTCC
T ss_pred cEEEEEEECCCEEEEEEEeCCCc
Confidence 3566899999999999986 454
No 69
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=51.35 E-value=5.5 Score=33.97 Aligned_cols=25 Identities=4% Similarity=-0.144 Sum_probs=18.5
Q ss_pred ccceEeccCCceEEEEEe--CCeEEEE
Q 046319 31 VMKTWVSLFLISCVGVWK--NDRVQII 55 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~--~g~~~ii 55 (135)
++.|||.|||.+++|+.+ +|.++++
T Consensus 3 ~i~GiDIGnsttev~l~~~~~g~i~~l 29 (607)
T 1nbw_A 3 LIAGIDIGNATTEVALASDYPQARAFV 29 (607)
T ss_dssp EEEEEEECSSEEEEEEEECBTTBCCCC
T ss_pred EEEEEEecCceEEEEEEEEcCCeEEEE
Confidence 467899999999998864 4555544
No 70
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=50.75 E-value=10 Score=28.07 Aligned_cols=20 Identities=0% Similarity=-0.328 Sum_probs=16.6
Q ss_pred cceEeccCCceEEEEEe-CCe
Q 046319 32 MKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 32 i~gID~GTtns~vA~~~-~g~ 51 (135)
++|||+|.|++.+++++ +|+
T Consensus 3 ~lgidiggt~~~~~l~d~~g~ 23 (289)
T 2aa4_A 3 TLAIDIGGTKLAAALIGADGQ 23 (289)
T ss_dssp EEEEEECSSEEEEEEECTTCC
T ss_pred EEEEEeCCCEEEEEEECCCCC
Confidence 46799999999999986 554
No 71
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=49.97 E-value=14 Score=28.95 Aligned_cols=20 Identities=5% Similarity=0.014 Sum_probs=17.2
Q ss_pred ccceEeccCCceEEEEEeCC
Q 046319 31 VMKTWVSLFLISCVGVWKND 50 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~~g 50 (135)
.++|||+|.|++.+++++.+
T Consensus 3 ~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred eEEEEECCccceeEEEEecc
Confidence 35679999999999999865
No 72
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=47.80 E-value=11 Score=28.73 Aligned_cols=22 Identities=5% Similarity=-0.262 Sum_probs=17.7
Q ss_pred cccceEeccCCceEEEEEe-CCe
Q 046319 30 RVMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 30 ~~i~gID~GTtns~vA~~~-~g~ 51 (135)
.+++|||+|.|++.+++++ +|.
T Consensus 7 ~~~lgiDiGgt~i~~~l~d~~G~ 29 (310)
T 3htv_A 7 NVVAGVDMGATHIRFCLRTAEGE 29 (310)
T ss_dssp EEEEEEEECSSEEEEEEEETTSC
T ss_pred CEEEEEEeCCCEEEEEEECCCCC
Confidence 4566799999999999986 454
No 73
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=46.77 E-value=14 Score=29.22 Aligned_cols=21 Identities=5% Similarity=-0.254 Sum_probs=15.0
Q ss_pred ccceEeccCCceEEEEEe-CCe
Q 046319 31 VMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~-~g~ 51 (135)
+|.|||.|..|+.+|... +|.
T Consensus 1 ~iiG~DIGGAn~K~a~~~~~g~ 22 (334)
T 3cet_A 1 MILGIDIGGANTKITELHENGE 22 (334)
T ss_dssp CEEEEEEC--CEEEEEECSTTC
T ss_pred CeeEEEecccceeeeeecCCCc
Confidence 356799999999999875 554
No 74
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=44.88 E-value=13 Score=30.30 Aligned_cols=19 Identities=5% Similarity=-0.468 Sum_probs=15.7
Q ss_pred cceEeccCCceEEEEEe-CC
Q 046319 32 MKTWVSLFLISCVGVWK-ND 50 (135)
Q Consensus 32 i~gID~GTtns~vA~~~-~g 50 (135)
.++||+|.||..|++++ +|
T Consensus 70 ~lalDlGGTn~Rv~~V~l~G 89 (451)
T 1bdg_A 70 FLALDLGGTNYRVLSVTLEG 89 (451)
T ss_dssp EEEEEESSSSEEEEEEEECC
T ss_pred EEEEEeCCCeEEEEEEecCC
Confidence 35699999999999985 44
No 75
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=44.53 E-value=26 Score=27.26 Aligned_cols=53 Identities=13% Similarity=-0.023 Sum_probs=29.9
Q ss_pred cccceEeccCCceEEEEEeCCeEEEEEC----CC---------CCeeee-EEEEEc--CCe-eEecHHHHHH
Q 046319 30 RVMKTWVSLFLISCVGVWKNDRVQIIAN----DQ---------GNRTTP-SYVAFT--DTE-RLIGDAAKNQ 84 (135)
Q Consensus 30 ~~i~gID~GTtns~vA~~~~g~~~ii~n----~~---------g~~~~P-S~V~~~--~~~-~~vG~~A~~~ 84 (135)
+++.|||+|..++.+ ..++...+.|+ .. ++..+. ..|.+. +.+ .++|+.|.+.
T Consensus 4 ~~iigiD~G~~~~K~--~~~~~~~~fPS~v~~~~~~~~~l~~~~~~~~~~~~v~v~~~~~~~y~vG~~A~~~ 73 (355)
T 3js6_A 4 VYVMALDFGNGFVKG--KINDEKFVIPSRIGRKTNENNQLKGFVDNKLDVSEFIINGNNDEVLLFGNDLDKT 73 (355)
T ss_dssp EEEEEEEECSSEEEE--EETTEEEEEESEEEECCSSCCSSTTTSCCCCSCEEEEETTCTTCCEEESTTHHHH
T ss_pred cEEEEEEcCCCcEEE--ecCCeEEEeceeeeecccCcccccccccCCCCceEEEEecCCeEEEEEchhhhhc
Confidence 456779999999995 34554444443 11 111111 234444 446 7899988654
No 76
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=44.12 E-value=12 Score=28.40 Aligned_cols=24 Identities=4% Similarity=-0.227 Sum_probs=17.7
Q ss_pred cccccceEeccCCceEEEEEe-CCe
Q 046319 28 RRRVMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 28 ~~~~i~gID~GTtns~vA~~~-~g~ 51 (135)
....++|||+|.|++.+++++ +|+
T Consensus 17 ~~~~~lgidiggt~i~~~l~d~~g~ 41 (321)
T 3r8e_A 17 FQGMILGIDVGGTSVKFGLVTPEGE 41 (321)
T ss_dssp --CCEEEEECCSSEEEEEEECTTCC
T ss_pred cCcEEEEEEECCCEEEEEEEcCCCc
Confidence 445566799999999999986 444
No 77
>1kcf_A Hypothetical 30.2 KD protein C25G10.02 in chromosome I; beta-alpha-beta motif, RUVC resolvase family, hydrolase; 2.30A {Schizosaccharomyces pombe} SCOP: a.140.2.1 c.55.3.7
Probab=43.97 E-value=21 Score=27.05 Aligned_cols=18 Identities=0% Similarity=-0.512 Sum_probs=15.8
Q ss_pred ccceEeccCCceEEEEEe
Q 046319 31 VMKTWVSLFLISCVGVWK 48 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~ 48 (135)
-|++||+|+-|.+.|...
T Consensus 41 sIlSID~GikNlAyc~l~ 58 (258)
T 1kcf_A 41 RVLGIDLGIKNFSYCFAS 58 (258)
T ss_dssp SEEEEEECSTTEEEEEEE
T ss_pred cEEEEecCCCceEEEEEc
Confidence 567799999999999886
No 78
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=43.83 E-value=14 Score=27.19 Aligned_cols=18 Identities=6% Similarity=-0.448 Sum_probs=15.8
Q ss_pred ccceEeccCCceEEEEEe
Q 046319 31 VMKTWVSLFLISCVGVWK 48 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~ 48 (135)
.++|||+|.|++.+++++
T Consensus 13 ~~lgidiggt~i~~~l~d 30 (267)
T 1woq_A 13 PLIGIDIGGTGIKGGIVD 30 (267)
T ss_dssp CEEEEEECSSEEEEEEEE
T ss_pred EEEEEEECCCEEEEEEEE
Confidence 456799999999999997
No 79
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=43.63 E-value=3.9 Score=32.99 Aligned_cols=19 Identities=21% Similarity=-0.123 Sum_probs=14.0
Q ss_pred eEeccCCceEEEEEeCCeE
Q 046319 34 TWVSLFLISCVGVWKNDRV 52 (135)
Q Consensus 34 gID~GTtns~vA~~~~g~~ 52 (135)
.||.||.++.+.+.-+..|
T Consensus 9 ViDnGs~~~KaG~ag~~~P 27 (427)
T 3dwl_A 9 IMDNGTGYSKLGYAGNDAP 27 (427)
T ss_dssp EECCCSSBC-CEETTSSSC
T ss_pred EEECCCCeEEEEECCCCCC
Confidence 3899999999998754443
No 80
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=42.84 E-value=14 Score=28.65 Aligned_cols=20 Identities=5% Similarity=-0.253 Sum_probs=16.5
Q ss_pred cccceEeccCCceEEEEEeC
Q 046319 30 RVMKTWVSLFLISCVGVWKN 49 (135)
Q Consensus 30 ~~i~gID~GTtns~vA~~~~ 49 (135)
.+++|||+|.|++.+++++.
T Consensus 29 ~~~lgiDiGgt~i~~~l~d~ 48 (373)
T 2q2r_A 29 PLTFVGDVGGTSARMGFVRE 48 (373)
T ss_dssp CEEEEEEECSSEEEEEEEEE
T ss_pred CeEEEEEEccccEEEEEEec
Confidence 34677999999999999863
No 81
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=42.55 E-value=15 Score=27.74 Aligned_cols=21 Identities=14% Similarity=0.059 Sum_probs=17.1
Q ss_pred ccceEeccCCceEEEEEe-CCe
Q 046319 31 VMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~-~g~ 51 (135)
.++|||+|.|++.+++++ +|.
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~g~ 46 (327)
T 2ap1_A 25 MYYGFDIGGTKIALGVFDSTRR 46 (327)
T ss_dssp EEEEEEECSSEEEEEEEETTCC
T ss_pred eEEEEEECCCEEEEEEEeCCCC
Confidence 456799999999999986 454
No 82
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=41.90 E-value=14 Score=28.98 Aligned_cols=22 Identities=0% Similarity=-0.251 Sum_probs=17.7
Q ss_pred cccceEeccCCceEEEEEe-CCe
Q 046319 30 RVMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 30 ~~i~gID~GTtns~vA~~~-~g~ 51 (135)
.+++|||+|+|++.+++++ +|.
T Consensus 85 ~~~lgiDiG~t~i~~~l~d~~G~ 107 (406)
T 1z6r_A 85 WHYLSLRISRGEIFLALRDLSSK 107 (406)
T ss_dssp CEEEEEEEETTEEEEEEEETTCC
T ss_pred cEEEEEEEcCCEEEEEEEcCCCC
Confidence 4567799999999999986 454
No 83
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=41.60 E-value=15 Score=30.05 Aligned_cols=20 Identities=15% Similarity=-0.366 Sum_probs=16.1
Q ss_pred ceEeccCCceEEEEEe-CCeE
Q 046319 33 KTWVSLFLISCVGVWK-NDRV 52 (135)
Q Consensus 33 ~gID~GTtns~vA~~~-~g~~ 52 (135)
++||+|.||..+++++ +|..
T Consensus 64 laiDlGGTnirv~lV~~~G~~ 84 (457)
T 2yhx_A 64 LAIVMGGGDLEVILISLAGRQ 84 (457)
T ss_dssp EEEEECSSEEEEEEEEEETTE
T ss_pred EEEEeCCCeEEEEEEEeCCCe
Confidence 5699999999999995 4543
No 84
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=41.15 E-value=16 Score=28.37 Aligned_cols=22 Identities=0% Similarity=-0.355 Sum_probs=17.7
Q ss_pred cccceEeccCCceEEEEEe-CCe
Q 046319 30 RVMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 30 ~~i~gID~GTtns~vA~~~-~g~ 51 (135)
..++|||+|.|++.+++++ +|.
T Consensus 87 ~~~lGIDiGgt~i~~~l~d~~G~ 109 (380)
T 2hoe_A 87 AYVLGIEVTRDEIAACLIDASMN 109 (380)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC
T ss_pred CeEEEEEECCCEEEEEEECCCCC
Confidence 4567799999999999986 454
No 85
>2nrh_A Transcriptional activator, putative, BAF family; structural genomics, unknown function, putative transcription activator, PSI-2; 2.30A {Campylobacter jejuni} SCOP: c.55.1.13 c.55.1.13
Probab=41.14 E-value=14 Score=27.22 Aligned_cols=19 Identities=0% Similarity=-0.233 Sum_probs=13.2
Q ss_pred cceEeccCCceEEEEEeCCeE
Q 046319 32 MKTWVSLFLISCVGVWKNDRV 52 (135)
Q Consensus 32 i~gID~GTtns~vA~~~~g~~ 52 (135)
++.||.|+||.. ++++++.
T Consensus 3 ~L~iDiGNT~ik--~~~~~~l 21 (219)
T 2nrh_A 3 LLLCDIGNSNAN--FLDDNKY 21 (219)
T ss_dssp CCEEEECSSEEE--EEC--CE
T ss_pred EEEEEeCCCEEE--EEECCEE
Confidence 456999999999 5665554
No 86
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=40.83 E-value=57 Score=20.35 Aligned_cols=77 Identities=13% Similarity=0.094 Sum_probs=44.9
Q ss_pred hhhHHHHHHHHHHHHHHHhcCc--cccccccceEeccCCceEEEEEeCCeEEEEE-CCCCCeeeeEEEEEcCCeeEecHH
Q 046319 4 QLQFFQEEGKQLLRLLLLRRGR--KRRRRVMKTWVSLFLISCVGVWKNDRVQIIA-NDQGNRTTPSYVAFTDTERLIGDA 80 (135)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~gID~GTtns~vA~~~~g~~~ii~-n~~g~~~~PS~V~~~~~~~~vG~~ 80 (135)
+..+|+.-....+..++...-. ..++++| +.=|.....+.+..+|.+++.. +++|+..++..+.+-..+-++|+.
T Consensus 10 ~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i--~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG~~ 87 (142)
T 3mdp_A 10 VYRFFASLTDEQLKDIALISEEKSFPTGSVI--FKENSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFGVS 87 (142)
T ss_dssp GSHHHHTSCHHHHHHHHHTEEEEEECTTCEE--ECTTSBCCEEEEEEESCEEEECC---------CEEEEECTTCEECGG
T ss_pred hCchhccCCHHHHHHHHHhhcEEecCCCCEE--EeCCCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEechH
Confidence 3456776666677777766322 2344443 4678888889999999988864 456666554556655556678866
Q ss_pred HH
Q 046319 81 AK 82 (135)
Q Consensus 81 A~ 82 (135)
+.
T Consensus 88 ~~ 89 (142)
T 3mdp_A 88 SL 89 (142)
T ss_dssp GS
T ss_pred HH
Confidence 54
No 87
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=40.39 E-value=28 Score=26.74 Aligned_cols=26 Identities=8% Similarity=-0.029 Sum_probs=19.4
Q ss_pred ccceEeccCCceEEEEEe--CCeEEEEE
Q 046319 31 VMKTWVSLFLISCVGVWK--NDRVQIIA 56 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~--~g~~~ii~ 56 (135)
.+++||+||..+.+.+++ ++.+.++.
T Consensus 13 ~~a~IDiGSns~rl~I~~~~~~~~~~i~ 40 (315)
T 1t6c_A 13 RVASIDIGSYSVRLTIAQIKDGKLSIIL 40 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEE
T ss_pred EEEEEEECcCcEEEEEEEEcCCcEEEEe
Confidence 467899999999988774 56565554
No 88
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=39.28 E-value=25 Score=27.22 Aligned_cols=19 Identities=0% Similarity=-0.314 Sum_probs=15.8
Q ss_pred ceEeccCCceEEEEEeCCe
Q 046319 33 KTWVSLFLISCVGVWKNDR 51 (135)
Q Consensus 33 ~gID~GTtns~vA~~~~g~ 51 (135)
..||-||||..+..+++|.
T Consensus 9 IavDWGTs~lRa~l~~~g~ 27 (295)
T 3nuw_A 9 IAIDWGSTNLRAWLYQGEE 27 (295)
T ss_dssp EEEEECSSCEEEEEEETTE
T ss_pred EEEEecchheeeeeecCCc
Confidence 3479999999999888664
No 89
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=39.10 E-value=17 Score=27.02 Aligned_cols=20 Identities=10% Similarity=-0.288 Sum_probs=14.9
Q ss_pred cccceEeccCCceEEEEEeCCe
Q 046319 30 RVMKTWVSLFLISCVGVWKNDR 51 (135)
Q Consensus 30 ~~i~gID~GTtns~vA~~~~g~ 51 (135)
.++. |||||.-+.=++ .+|.
T Consensus 123 ~~iV-vD~GTA~T~d~v-~~g~ 142 (249)
T 3bex_A 123 NGII-IDMGTATTVDLV-VNGS 142 (249)
T ss_dssp CEEE-EEESSEEEEEEE-ETTE
T ss_pred CEEE-EEcCCceEEEEE-eCCe
Confidence 4444 899999888777 7774
No 90
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=36.43 E-value=17 Score=28.73 Aligned_cols=22 Identities=0% Similarity=-0.236 Sum_probs=17.7
Q ss_pred cccceEeccCCceEEEEEe-CCe
Q 046319 30 RVMKTWVSLFLISCVGVWK-NDR 51 (135)
Q Consensus 30 ~~i~gID~GTtns~vA~~~-~g~ 51 (135)
..++|||+|+|++.+++++ +|.
T Consensus 108 ~~~lGIDiGgt~i~~~l~d~~G~ 130 (429)
T 1z05_A 108 WQFLSMRLGRGYLTIALHELGGE 130 (429)
T ss_dssp EEEEEEEEETTEEEEEEEETTSC
T ss_pred CEEEEEEECCCEEEEEEECCCCC
Confidence 4567799999999999986 444
No 91
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=36.32 E-value=20 Score=29.62 Aligned_cols=17 Identities=12% Similarity=-0.410 Sum_probs=14.7
Q ss_pred cceEeccCCceEEEEEe
Q 046319 32 MKTWVSLFLISCVGVWK 48 (135)
Q Consensus 32 i~gID~GTtns~vA~~~ 48 (135)
.++||+|.||..|+.++
T Consensus 82 ~LalDlGGTn~Rv~~V~ 98 (485)
T 3o8m_A 82 FLALDLGGTNLRVVLVK 98 (485)
T ss_dssp EEEEEESSSEEEEEEEE
T ss_pred EEEEEecCCeEEEEEEE
Confidence 45689999999999984
No 92
>2a97_A BONT/F, botulinum neurotoxin type F, bontoxilysin F; clostridium botulinum neurotoxin serotype F, light chain, catalytic domain, X-RAY,; 1.80A {Clostridium botulinum} PDB: 2a8a_A 3fie_A 3fii_A
Probab=35.03 E-value=52 Score=26.81 Aligned_cols=38 Identities=13% Similarity=0.170 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHhcCccccccc-cceEeccCCceEEEEE
Q 046319 10 EEGKQLLRLLLLRRGRKRRRRV-MKTWVSLFLISCVGVW 47 (135)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~-i~gID~GTtns~vA~~ 47 (135)
.-|++||+++-..-||++.+.. .--+|++....++.+.
T Consensus 102 ~~G~~LL~~I~~aiPflG~~~t~~~~f~~~~~~~s~N~~ 140 (439)
T 2a97_A 102 PAGKVLLQEISYAKPYLGNDHTPIDEFSPVTRTTSVNIK 140 (439)
T ss_dssp HHHHHHHHHHHHCCCCSCCTTSCTTBCCCCSTTTEEEEE
T ss_pred HHHHHHHHHHHhcCCcCCCCCCCccccccccccceeEEE
Confidence 3589999999999999997755 4467899998888876
No 93
>1zb7_A Neurotoxin; hexxh metalloprotease; HET: FLC; 2.35A {Clostridium botulinum}
Probab=33.48 E-value=43 Score=27.42 Aligned_cols=38 Identities=8% Similarity=0.037 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHhcCccccccc-cceEeccCCceEEEEE
Q 046319 10 EEGKQLLRLLLLRRGRKRRRRV-MKTWVSLFLISCVGVW 47 (135)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~-i~gID~GTtns~vA~~ 47 (135)
.-|++||+++-..-||++.+.. .--+|++....++.+.
T Consensus 103 ~~G~~LL~~I~~aiPflG~~~t~~~~f~~~~~~~svn~k 141 (455)
T 1zb7_A 103 PSGQRLLDMIVDAIPYLGNASTPPDKFAANVANVSINKK 141 (455)
T ss_dssp HHHHHHHHHHHHCCCCSCCTTSCTTEECCSSTTTEEEEE
T ss_pred HHHHHHHHHHHhcCCcCCCCCCCccccccccccceeeee
Confidence 3589999999999999997755 4578999999998875
No 94
>2zi0_A Protein 2B, TAV2B; RNAI suppression, nucleus, suppressor of RNA silencing; 2.82A {Tomato aspermy virus} PDB: 3cz3_A
Probab=30.81 E-value=26 Score=21.36 Aligned_cols=29 Identities=17% Similarity=0.206 Sum_probs=19.6
Q ss_pred CchhhhHHHHHHHHHHHHHHHh---cCccccc
Q 046319 1 MELQLQFFQEEGKQLLRLLLLR---RGRKRRR 29 (135)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 29 (135)
+|+||+-.+|+.++.=..--.+ .|+++.+
T Consensus 11 v~lkLarm~Ekkk~rRk~Hk~NRkeRGHKSPS 42 (75)
T 2zi0_A 11 IIRKLERMNQKKQAQRKRHKLNRKERGHKSPS 42 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhccCCCHH
Confidence 3789999999988765443333 6776643
No 95
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=29.77 E-value=29 Score=30.77 Aligned_cols=16 Identities=0% Similarity=-0.622 Sum_probs=14.4
Q ss_pred ceEeccCCceEEEEEe
Q 046319 33 KTWVSLFLISCVGVWK 48 (135)
Q Consensus 33 ~gID~GTtns~vA~~~ 48 (135)
++||+|.||..+++++
T Consensus 81 laiDlGGTnirv~lv~ 96 (917)
T 1cza_N 81 IALDLGGSSFRILRVQ 96 (917)
T ss_dssp EEEEESSSSEEEEEEE
T ss_pred EEEEeCCCeEEEEEEE
Confidence 5699999999999995
No 96
>1z7h_A Tetanus toxin light chain; TENT, metalloprotease, snare, neurotransmission, hydrolase; 2.30A {Clostridium tetani} PDB: 1yvg_A
Probab=29.37 E-value=42 Score=27.38 Aligned_cols=38 Identities=8% Similarity=-0.020 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHhcCccccccc-cceEeccCCceEEEEE
Q 046319 10 EEGKQLLRLLLLRRGRKRRRRV-MKTWVSLFLISCVGVW 47 (135)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~-i~gID~GTtns~vA~~ 47 (135)
.-|++||+++-..-||++.+.. .--+|++....++.+.
T Consensus 106 ~~G~~LL~~I~~aiPf~G~~~t~~~~f~~~~~~~svn~k 144 (447)
T 1z7h_A 106 VAGEALLDKIINAIPYLGNSYSLLDKFDTNSNSVSFNLL 144 (447)
T ss_dssp HHHHHHHHHHHHCCCCSCCTTSCTTEECCCSTTTEEEEE
T ss_pred HHHHHHHHHHHhcCCcCCCCCCCccccccccccceeeee
Confidence 3589999999999999997755 4478999999988775
No 97
>1epw_A Bontoxilysin B, botulinum neurotoxin type B; zinc, metalloprotease, transmembrane, hydrolase; 1.90A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 d.92.1.7 h.4.2.1 PDB: 1f31_A* 1g9a_A* 1g9b_A* 1g9c_A* 1g9d_A* 1i1e_A* 1s0b_A 1s0c_A 1s0d_A 1s0e_A 1s0f_A 1s0g_A 2np0_A 3zuq_A 2etf_A 2xhl_A 1z0h_A 2nm1_A 3g94_A 1f82_A ...
Probab=28.26 E-value=48 Score=30.58 Aligned_cols=55 Identities=18% Similarity=0.258 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHhcCccccccc-cceEeccCCceEEEEEeCCeEEEEEC----CCCCeeeeEEEEEcC
Q 046319 11 EGKQLLRLLLLRRGRKRRRRV-MKTWVSLFLISCVGVWKNDRVQIIAN----DQGNRTTPSYVAFTD 72 (135)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~-i~gID~GTtns~vA~~~~g~~~ii~n----~~g~~~~PS~V~~~~ 72 (135)
-|++||+++-..-||++.+.. .-.+|||.+..++.+. +++ ..-+..+|++|-|..
T Consensus 103 ~G~~LL~~I~~aiPf~G~~~t~~~~f~~~~~~~s~n~~-------~~~p~~~~~~~~~~~NliIfGP 162 (1290)
T 1epw_A 103 LGEKLLEMIINGIPYLGDRRVPLEEFNTNIASVTVNKL-------ISNPGEVERKKGIFANLIIFGP 162 (1290)
T ss_dssp HHHHHHHHHHHCCCCSSCTTSCTTEECCCSTTTEEEEE-------CSCTTCCSCEEEEECSEEEECC
T ss_pred HHHHHHHHHHhCCCcCCCCCCCcceeccccccceeeee-------ecCCCcccceeeeccceEEECC
Confidence 589999999999999997755 4478999999999765 222 111234567777764
No 98
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=27.53 E-value=34 Score=30.37 Aligned_cols=17 Identities=12% Similarity=-0.445 Sum_probs=14.7
Q ss_pred cceEeccCCceEEEEEe
Q 046319 32 MKTWVSLFLISCVGVWK 48 (135)
Q Consensus 32 i~gID~GTtns~vA~~~ 48 (135)
.++||||.||..|++++
T Consensus 528 ~lalDlGGTn~Rv~~V~ 544 (917)
T 1cza_N 528 FLALDLGGTNFRVLLVK 544 (917)
T ss_dssp EEEEEESSSSEEEEEEE
T ss_pred EEEEEECCCcEEEEEEE
Confidence 35699999999999985
No 99
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=27.03 E-value=37 Score=27.74 Aligned_cols=16 Identities=6% Similarity=-0.517 Sum_probs=14.1
Q ss_pred ceEeccCCceEEEEEe
Q 046319 33 KTWVSLFLISCVGVWK 48 (135)
Q Consensus 33 ~gID~GTtns~vA~~~ 48 (135)
+.||||.||..|+.++
T Consensus 62 LAlDlGGTn~RV~~V~ 77 (445)
T 3hm8_A 62 LALDLGGTNFRVLLVR 77 (445)
T ss_dssp EEEEESSSSEEEEEEE
T ss_pred EEEEecCCeEEEEEEE
Confidence 4589999999999985
No 100
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=25.10 E-value=43 Score=26.20 Aligned_cols=18 Identities=6% Similarity=-0.123 Sum_probs=14.6
Q ss_pred ccceEeccCCceEEEEEe
Q 046319 31 VMKTWVSLFLISCVGVWK 48 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~~ 48 (135)
.++.||.||+.+.+-+++
T Consensus 4 ~~avID~GSns~Rl~I~~ 21 (353)
T 3aap_A 4 CIAVIDAGSTGSRLHIYS 21 (353)
T ss_dssp EEEEEEECSSCEEEEEEE
T ss_pred EEEEEEcCCCCeEEEEEE
Confidence 356699999999988874
No 101
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=24.22 E-value=43 Score=27.53 Aligned_cols=16 Identities=13% Similarity=-0.469 Sum_probs=13.9
Q ss_pred ceEeccCCceEEEEEe
Q 046319 33 KTWVSLFLISCVGVWK 48 (135)
Q Consensus 33 ~gID~GTtns~vA~~~ 48 (135)
+.||||.||..|+.++
T Consensus 80 LAlDlGGTNfRV~~V~ 95 (470)
T 3f9m_A 80 LSLDLGGTNFRVMLVK 95 (470)
T ss_dssp EEEEESSSEEEEEEEE
T ss_pred EEEEecCceEEEEEEE
Confidence 4489999999999984
No 102
>2fpq_A Botulinum neurotoxin D light chain; hexxh metalloprotease; 1.65A {Clostridium botulinum}
Probab=23.39 E-value=69 Score=26.13 Aligned_cols=39 Identities=18% Similarity=0.125 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHhcCccccccc-cceEeccCCceEEEEEe
Q 046319 10 EEGKQLLRLLLLRRGRKRRRRV-MKTWVSLFLISCVGVWK 48 (135)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~-i~gID~GTtns~vA~~~ 48 (135)
.-|++||+++-..-||++.+.. .--+|++...+|+.+..
T Consensus 109 ~~G~~LL~~I~~aiPf~G~s~t~~~~F~~~~~~~~vn~~~ 148 (444)
T 2fpq_A 109 DIGKKLINYLVVGSPFMGDSSTPEDTFDFTRHTTNIAVEK 148 (444)
T ss_dssp HHHHHHHHHHHHCCCCSCCTTSCTTEEECCCTTTCEEEEE
T ss_pred hHHHHHHHHHHhcCCCCCCCCCCccccccccccceeeeEe
Confidence 3589999999999999987744 44789999998887753
No 103
>2qn0_A Neurotoxin; botulism, snares, protease; 1.75A {Clostridium botulinum} PDB: 3deb_A
Probab=23.02 E-value=72 Score=25.94 Aligned_cols=38 Identities=18% Similarity=0.062 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHhcCccccccc-cceEeccCCceEEEEE
Q 046319 10 EEGKQLLRLLLLRRGRKRRRRV-MKTWVSLFLISCVGVW 47 (135)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~-i~gID~GTtns~vA~~ 47 (135)
.-|++||+++-..-||++.+.. .--+|++....|+.+.
T Consensus 101 ~~G~~LL~~I~~aiPf~G~s~t~~~~F~~~~~~~svn~k 139 (430)
T 2qn0_A 101 EIGEELIYRLSTDIPFPGNNNTPINTFDFDVDFNSVDVK 139 (430)
T ss_dssp HHHHHHHHHHHHCCCCSCCTTSCTTEEETTSTTSSEEEE
T ss_pred hHHHHHHHHHHhcCCCCCCCCCCcccccccccceeeeee
Confidence 3589999999999999987744 4578999999998876
No 104
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=23.00 E-value=63 Score=28.35 Aligned_cols=34 Identities=21% Similarity=-0.034 Sum_probs=23.3
Q ss_pred HHHHHHhcCccccccccceEecc-CCceEEEEEe-CCe
Q 046319 16 LRLLLLRRGRKRRRRVMKTWVSL-FLISCVGVWK-NDR 51 (135)
Q Consensus 16 ~~~~~~~~~~~~~~~~i~gID~G-Ttns~vA~~~-~g~ 51 (135)
|+-||...|+..+ .++|||-| .|-|.+|+++ +|+
T Consensus 317 L~~lLl~aP~~~~--~vlg~dpg~r~g~k~a~vd~~G~ 352 (785)
T 3bzc_A 317 LHDLLLAAPAGPR--ATLGLDPGLRTGVKVAVVDATGK 352 (785)
T ss_dssp HHHHHTSCCCCSC--CEEEEECCSSSCEEEEEECTTSC
T ss_pred HHHHHcCCCCCCC--eEEEECCCCcCceEEEEECCCCC
Confidence 4455666787654 45669999 4778888885 454
No 105
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=22.56 E-value=57 Score=27.79 Aligned_cols=26 Identities=8% Similarity=-0.152 Sum_probs=17.7
Q ss_pred ccceEeccCCceEEEEE--eC-CeEEEEE
Q 046319 31 VMKTWVSLFLISCVGVW--KN-DRVQIIA 56 (135)
Q Consensus 31 ~i~gID~GTtns~vA~~--~~-g~~~ii~ 56 (135)
+|.|||.|++.+-+|+. .+ |.++.+.
T Consensus 3 ~i~gvdign~tte~~la~~~~~~~~~f~~ 31 (610)
T 2d0o_A 3 YIAGIDIGNSSTEVALATLDEAGALTITH 31 (610)
T ss_dssp EEEEEEECSSEEEEEEEEECTTCCEEEEE
T ss_pred EEEEEecCCcchheeeeeecCCCceEEee
Confidence 46789999777777764 33 5566553
No 106
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=20.92 E-value=80 Score=22.90 Aligned_cols=24 Identities=8% Similarity=0.012 Sum_probs=19.0
Q ss_pred cccccceEeccCCceEEEEEeCCe
Q 046319 28 RRRVMKTWVSLFLISCVGVWKNDR 51 (135)
Q Consensus 28 ~~~~i~gID~GTtns~vA~~~~g~ 51 (135)
..++|+.||==|..|+||++++++
T Consensus 10 ~~~~iLaidTS~~~~sval~~~~~ 33 (218)
T 2a6a_A 10 HHHMNVLALDTSQRIRIGLRKGED 33 (218)
T ss_dssp ---CEEEEEECSSSEEEEEEETTE
T ss_pred ccceEEEEEcCCcCeEEEEEECCE
Confidence 357889999999999999998875
No 107
>3ffz_A Botulinum neurotoxin type E; botulinum neurotoxin serotype E, botulism, domain organization, endopeptidase, translocation, hydrolase; 2.65A {Clostridium botulinum}
Probab=20.83 E-value=81 Score=29.02 Aligned_cols=35 Identities=11% Similarity=-0.136 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHhcCcccccccc-ceEeccCCceEE
Q 046319 10 EEGKQLLRLLLLRRGRKRRRRVM-KTWVSLFLISCV 44 (135)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~i-~gID~GTtns~v 44 (135)
.-|++||+++-..-||++.+... =.+|+|.|.+.-
T Consensus 98 ~~G~~LL~~I~~aiPf~G~~~t~~n~f~~~~t~~~n 133 (1252)
T 3ffz_A 98 LSGGILLEELSKANPYLGNDNTPDNQFHIGDASAVE 133 (1252)
T ss_dssp HHHHHHHHHHHHCCCCSCCTTSCTTSCCCCTTTCEE
T ss_pred hHHHHHHHHHHhCCCcCCCCCCCcccccccccceeE
Confidence 35899999999999999877543 357888888873
No 108
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=20.03 E-value=61 Score=25.39 Aligned_cols=17 Identities=0% Similarity=-0.490 Sum_probs=14.2
Q ss_pred ceEeccCCceEEEEEeC
Q 046319 33 KTWVSLFLISCVGVWKN 49 (135)
Q Consensus 33 ~gID~GTtns~vA~~~~ 49 (135)
.+||-||||..+..++.
T Consensus 10 IavDWGTSnlRa~l~~~ 26 (330)
T 3t69_A 10 AAVDWGTSSFRLWIIGE 26 (330)
T ss_dssp EEEEECSSCEEEEEECT
T ss_pred EEEEecchheehheecC
Confidence 34799999999988863
No 109
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=20.02 E-value=92 Score=24.09 Aligned_cols=27 Identities=0% Similarity=-0.148 Sum_probs=18.7
Q ss_pred cccceEeccCCceEEEEEe---CCeEEEEE
Q 046319 30 RVMKTWVSLFLISCVGVWK---NDRVQIIA 56 (135)
Q Consensus 30 ~~i~gID~GTtns~vA~~~---~g~~~ii~ 56 (135)
..++.||+||..+-+.+++ ++.+.++.
T Consensus 16 ~~~A~IDiGSNsiRL~I~~~~~~~~~~~i~ 45 (343)
T 3cer_A 16 VTVAGIDCGTNSIRLKIARVDADGMHEVVP 45 (343)
T ss_dssp EEEEEEEECSSCEEEEEEEEETTEEEEEEE
T ss_pred CeEEEEEcccceeEeEEEEEcCCCCEEEEE
Confidence 3467899999998887764 34455554
Done!