Query 046320
Match_columns 198
No_of_seqs 115 out of 1078
Neff 4.5
Searched_HMMs 46136
Date Fri Mar 29 10:53:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046320.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046320hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0141 HisD Histidinol dehydr 100.0 3E-75 6.5E-80 536.2 17.5 182 1-190 199-424 (425)
2 PRK00877 hisD bifunctional his 100.0 4.6E-75 1E-79 537.0 15.3 179 1-187 203-425 (425)
3 PRK12447 histidinol dehydrogen 100.0 6.8E-75 1.5E-79 535.8 16.4 184 1-192 198-425 (426)
4 PRK13770 histidinol dehydrogen 100.0 1.3E-74 2.7E-79 532.5 15.8 179 1-187 193-415 (416)
5 TIGR00069 hisD histidinol dehy 100.0 2.2E-74 4.8E-79 528.1 14.9 178 1-186 172-393 (393)
6 PF00815 Histidinol_dh: Histid 100.0 3.5E-74 7.6E-79 529.7 14.3 180 1-188 190-412 (412)
7 PLN02926 histidinol dehydrogen 100.0 2E-73 4.4E-78 526.6 15.6 184 1-189 204-430 (431)
8 cd06572 Histidinol_dh Histidin 100.0 8.1E-71 1.8E-75 504.7 13.0 171 1-179 176-390 (390)
9 PRK13769 histidinol dehydrogen 100.0 2.9E-67 6.3E-72 478.0 13.5 169 1-183 167-368 (368)
10 KOG2697 Histidinol dehydrogena 100.0 7E-61 1.5E-65 429.7 10.2 191 1-195 210-445 (446)
11 cd06534 ALDH-SF NAD(P)+-depend 95.5 0.087 1.9E-06 47.0 8.9 107 34-145 202-332 (367)
12 cd07104 ALDH_BenzADH-like ALDH 93.4 0.49 1.1E-05 43.4 8.7 47 95-143 343-394 (431)
13 cd07149 ALDH_y4uC Uncharacteri 93.0 0.59 1.3E-05 43.1 8.6 47 95-143 365-416 (453)
14 cd07106 ALDH_AldA-AAD23400 Str 90.9 1.5 3.2E-05 40.7 8.8 48 95-143 359-410 (446)
15 cd07147 ALDH_F21_RNP123 Aldehy 90.8 1.6 3.5E-05 40.5 8.9 67 95-162 364-448 (452)
16 cd07150 ALDH_VaniDH_like Pseud 90.7 1.5 3.3E-05 40.5 8.7 47 95-143 363-414 (451)
17 cd07151 ALDH_HBenzADH NADP+-de 90.7 1.4 3E-05 41.2 8.5 48 95-144 375-427 (465)
18 cd07092 ALDH_ABALDH-YdcW Esche 90.6 1.6 3.4E-05 40.4 8.6 50 95-146 363-417 (450)
19 cd07145 ALDH_LactADH_F420-Bios 90.4 1.4 3.1E-05 40.9 8.3 66 95-162 368-452 (456)
20 cd07099 ALDH_DDALDH Methylomon 90.0 1.5 3.3E-05 40.5 8.0 47 95-143 364-415 (453)
21 cd07103 ALDH_F5_SSADH_GabD Mit 89.1 2.5 5.4E-05 39.1 8.7 47 95-143 364-415 (451)
22 cd07101 ALDH_SSADH2_GabD2 Myco 88.6 3 6.6E-05 38.8 8.9 47 95-143 364-415 (454)
23 PRK00197 proA gamma-glutamyl p 88.0 4.4 9.5E-05 37.7 9.6 49 95-144 319-371 (417)
24 cd07088 ALDH_LactADH-AldA Esch 88.0 2.9 6.3E-05 39.0 8.4 49 95-145 381-434 (468)
25 cd07115 ALDH_HMSADH_HapE Pseud 87.9 3.6 7.8E-05 38.2 9.0 48 95-143 364-415 (453)
26 cd07102 ALDH_EDX86601 Uncharac 87.9 2.9 6.3E-05 38.7 8.3 46 96-143 366-416 (452)
27 cd07094 ALDH_F21_LactADH-like 87.7 3.4 7.4E-05 38.3 8.7 48 95-144 365-417 (453)
28 cd07142 ALDH_F2BC Arabidosis a 87.3 3.4 7.3E-05 38.9 8.5 48 95-143 389-440 (476)
29 cd07114 ALDH_DhaS Uncharacteri 87.3 2.9 6.2E-05 38.9 7.9 48 95-144 370-422 (457)
30 cd07087 ALDH_F3-13-14_CALDH-li 87.2 0.51 1.1E-05 43.7 3.0 68 95-164 337-424 (426)
31 cd07146 ALDH_PhpJ Streptomyces 87.1 3.8 8.2E-05 38.3 8.7 48 95-143 362-413 (451)
32 cd07148 ALDH_RL0313 Uncharacte 86.3 4.3 9.3E-05 37.9 8.6 48 95-143 367-418 (455)
33 cd07141 ALDH_F1AB_F2_RALDH1 NA 86.1 4.3 9.3E-05 38.2 8.5 50 95-145 393-446 (481)
34 cd07100 ALDH_SSADH1_GabD1 Myco 85.5 5.5 0.00012 36.9 8.8 48 95-144 342-394 (429)
35 cd07152 ALDH_BenzADH NAD-depen 85.3 5.8 0.00013 36.8 8.8 48 95-143 354-405 (443)
36 PLN00412 NADP-dependent glycer 85.2 5.5 0.00012 37.9 8.8 48 95-143 398-449 (496)
37 PRK13968 putative succinate se 85.1 6.1 0.00013 37.2 9.0 48 95-143 372-423 (462)
38 COG1012 PutA NAD-dependent ald 85.0 0.59 1.3E-05 44.5 2.2 48 95-143 378-429 (472)
39 cd07135 ALDH_F14-YMR110C Sacch 84.8 0.84 1.8E-05 42.7 3.1 46 95-142 347-397 (436)
40 cd07119 ALDH_BADH-GbsA Bacillu 84.5 0.6 1.3E-05 43.8 2.0 47 95-143 385-436 (482)
41 TIGR01780 SSADH succinate-semi 84.5 5.9 0.00013 36.9 8.5 48 95-144 365-417 (448)
42 PLN02766 coniferyl-aldehyde de 84.3 6.4 0.00014 37.6 8.8 48 95-143 406-457 (501)
43 TIGR03250 PhnAcAld_DH putative 83.9 7.1 0.00015 36.8 8.9 48 95-143 381-432 (472)
44 TIGR00407 proA gamma-glutamyl 82.8 2.2 4.7E-05 39.8 4.9 58 95-154 311-373 (398)
45 PRK11241 gabD succinate-semial 82.6 8.2 0.00018 36.7 8.8 66 95-162 393-476 (482)
46 cd07090 ALDH_F9_TMBADH NAD+-de 82.3 0.99 2.2E-05 42.0 2.5 48 95-143 367-418 (457)
47 PLN02278 succinic semialdehyde 81.8 8.2 0.00018 36.8 8.5 48 95-143 407-458 (498)
48 cd07079 ALDH_F18-19_ProA-GPR G 81.6 13 0.00027 34.6 9.5 48 95-143 313-364 (406)
49 cd07078 ALDH NAD(P)+ dependent 80.9 1.3 2.8E-05 40.4 2.7 68 95-163 344-429 (432)
50 cd07089 ALDH_CddD-AldA-like Rh 80.9 1.1 2.3E-05 42.0 2.1 47 95-143 372-423 (459)
51 cd07137 ALDH_F3FHI Plant aldeh 80.8 1.6 3.6E-05 40.7 3.4 68 95-163 343-429 (432)
52 cd07133 ALDH_CALDH_CalB Conife 80.7 1.4 2.9E-05 41.1 2.8 68 95-164 345-432 (434)
53 cd07111 ALDH_F16 Aldehyde dehy 80.2 8.5 0.00018 36.5 8.0 48 95-143 393-444 (480)
54 cd07121 ALDH_EutE Ethanolamine 80.1 3 6.5E-05 39.1 4.9 48 95-143 337-390 (429)
55 cd07122 ALDH_F20_ACDH Coenzyme 79.9 2.7 5.8E-05 39.7 4.5 69 95-164 335-433 (436)
56 cd07140 ALDH_F1L_FTFDH 10-form 79.0 14 0.0003 35.2 9.0 48 96-145 396-450 (486)
57 cd07143 ALDH_AldA_AN0554 Asper 78.4 12 0.00025 35.5 8.3 48 95-143 392-443 (481)
58 cd07098 ALDH_F15-22 Aldehyde d 78.0 1.8 3.9E-05 40.4 2.7 46 95-142 374-424 (465)
59 PRK09406 gabD1 succinic semial 77.7 1.8 3.9E-05 40.7 2.6 49 95-144 369-421 (457)
60 cd07093 ALDH_F8_HMSADH Human a 77.0 1.9 4.2E-05 39.9 2.6 50 95-146 368-422 (455)
61 TIGR02299 HpaE 5-carboxymethyl 76.8 1.8 4E-05 40.7 2.4 68 95-163 389-473 (488)
62 cd07139 ALDH_AldA-Rv0768 Mycob 76.5 1.8 4E-05 40.4 2.3 50 95-145 385-438 (471)
63 cd07105 ALDH_SaliADH Salicylal 76.3 1.9 4.2E-05 39.8 2.4 68 95-163 344-429 (432)
64 cd07128 ALDH_MaoC-N N-terminal 75.8 2.2 4.8E-05 41.0 2.7 72 95-167 404-504 (513)
65 PRK09847 gamma-glutamyl-gamma- 75.4 2.1 4.5E-05 40.7 2.4 48 95-144 404-456 (494)
66 cd07113 ALDH_PADH_NahF Escheri 75.3 2.2 4.8E-05 40.1 2.5 49 95-144 388-440 (477)
67 PRK13473 gamma-aminobutyraldeh 75.3 1.8 4E-05 40.5 2.0 50 95-145 385-438 (475)
68 PLN02203 aldehyde dehydrogenas 75.0 2.4 5.1E-05 40.5 2.7 69 95-164 353-440 (484)
69 cd07138 ALDH_CddD_SSP0762 Rhod 74.9 2 4.3E-05 40.2 2.1 68 95-163 380-463 (466)
70 cd07129 ALDH_KGSADH Alpha-Keto 74.2 2.4 5.2E-05 39.7 2.5 48 95-143 357-412 (454)
71 cd07095 ALDH_SGSD_AstD N-succi 74.1 30 0.00064 32.3 9.6 48 95-144 344-396 (431)
72 cd07118 ALDH_SNDH Gluconobacte 74.1 2.6 5.6E-05 39.4 2.7 51 95-146 367-421 (454)
73 TIGR03216 OH_muco_semi_DH 2-hy 73.9 2.4 5.1E-05 39.9 2.4 47 95-143 392-443 (481)
74 TIGR02278 PaaN-DH phenylacetic 73.9 2.8 6.1E-05 41.6 3.0 80 95-175 396-505 (663)
75 PRK10090 aldehyde dehydrogenas 73.8 2.6 5.6E-05 39.2 2.6 50 95-146 319-373 (409)
76 TIGR01237 D1pyr5carbox2 delta- 73.8 23 0.00049 33.9 8.9 47 95-143 419-470 (511)
77 cd07132 ALDH_F3AB Aldehyde deh 73.7 3.3 7.1E-05 38.8 3.2 68 95-163 337-423 (443)
78 cd07110 ALDH_F10_BADH Arabidop 73.4 2.1 4.6E-05 39.8 1.9 47 95-143 369-420 (456)
79 PLN02467 betaine aldehyde dehy 73.2 2.5 5.4E-05 40.4 2.3 47 95-143 400-451 (503)
80 cd07107 ALDH_PhdK-like Nocardi 73.1 2.8 6E-05 39.1 2.6 48 95-143 367-418 (456)
81 PRK13252 betaine aldehyde dehy 72.4 2.8 6.1E-05 39.5 2.5 47 95-143 392-443 (488)
82 cd07117 ALDH_StaphAldA1 Unchar 72.1 2.9 6.2E-05 39.5 2.5 49 95-144 386-438 (475)
83 cd07144 ALDH_ALD2-YMR170C Sacc 72.0 2.5 5.5E-05 39.7 2.1 48 95-143 395-446 (484)
84 TIGR01804 BADH glycine betaine 71.9 3.5 7.6E-05 38.5 3.0 51 95-146 384-438 (467)
85 cd07116 ALDH_ACDHII-AcoD Ralst 71.6 3.1 6.8E-05 39.1 2.6 48 95-143 390-441 (479)
86 cd07136 ALDH_YwdH-P39616 Bacil 71.3 4.1 8.8E-05 38.5 3.3 67 95-163 337-423 (449)
87 PRK11563 bifunctional aldehyde 71.1 3.3 7.1E-05 41.1 2.7 47 95-142 408-460 (675)
88 cd07097 ALDH_KGSADH-YcbD Bacil 69.8 3.3 7.2E-05 38.8 2.3 48 95-143 384-435 (473)
89 cd07082 ALDH_F11_NP-GAPDH NADP 69.8 3.6 7.8E-05 38.4 2.6 48 95-143 384-435 (473)
90 PRK13805 bifunctional acetalde 69.8 5.2 0.00011 40.8 3.8 70 95-165 349-448 (862)
91 cd07109 ALDH_AAS00426 Uncharac 69.0 3.4 7.4E-05 38.4 2.2 47 95-143 366-417 (454)
92 PRK11903 aldehyde dehydrogenas 68.9 4.1 8.8E-05 39.3 2.8 46 95-141 407-458 (521)
93 cd07130 ALDH_F7_AASADH NAD+-de 68.3 3.2 7E-05 39.0 1.9 68 95-163 381-468 (474)
94 PLN02466 aldehyde dehydrogenas 68.2 3.9 8.4E-05 39.6 2.5 67 95-162 443-526 (538)
95 TIGR01722 MMSDH methylmalonic 68.0 13 0.00029 34.9 6.0 49 95-144 385-437 (477)
96 cd06533 Glyco_transf_WecG_TagA 68.0 14 0.00031 30.2 5.5 81 51-135 32-123 (171)
97 cd07086 ALDH_F7_AASADH-like NA 67.9 3.9 8.4E-05 38.5 2.4 49 95-143 385-438 (478)
98 cd07077 ALDH-like NAD(P)+-depe 67.6 65 0.0014 29.5 10.2 68 96-164 302-395 (397)
99 PRK11905 bifunctional proline 67.3 29 0.00064 37.2 8.9 42 101-143 933-978 (1208)
100 PRK03137 1-pyrroline-5-carboxy 66.9 4.5 9.7E-05 38.6 2.6 46 95-142 422-472 (514)
101 cd07091 ALDH_F1-2_Ald2-like AL 66.8 4.2 9.1E-05 38.1 2.4 46 95-142 389-439 (476)
102 cd07559 ALDH_ACDHII_AcoD-like 66.3 4.1 9E-05 38.4 2.2 47 95-143 391-442 (480)
103 PRK11904 bifunctional proline 66.0 27 0.00058 36.9 8.2 43 101-144 941-987 (1038)
104 PLN02315 aldehyde dehydrogenas 66.0 4.2 9.1E-05 39.0 2.2 69 95-164 403-491 (508)
105 PF00171 Aldedh: Aldehyde dehy 65.5 4 8.7E-05 38.0 2.0 50 95-146 376-430 (462)
106 cd07083 ALDH_P5CDH ALDH subfam 65.4 41 0.0009 32.0 8.7 46 95-142 406-458 (500)
107 PRK09407 gabD2 succinic semial 65.2 5.3 0.00011 38.3 2.8 47 95-143 400-451 (524)
108 cd07131 ALDH_AldH-CAJ73105 Unc 63.7 6 0.00013 37.1 2.7 49 95-144 386-438 (478)
109 cd07134 ALDH_AlkH-like Pseudom 63.0 6.4 0.00014 36.7 2.8 47 95-143 344-395 (433)
110 cd07081 ALDH_F20_ACDH_EutE-lik 63.0 11 0.00024 35.6 4.4 51 95-146 334-395 (439)
111 PLN02174 aldehyde dehydrogenas 62.1 5.2 0.00011 38.4 2.0 69 95-164 354-441 (484)
112 cd07120 ALDH_PsfA-ACA09737 Pse 61.5 6.1 0.00013 37.1 2.4 50 95-145 368-421 (455)
113 cd07108 ALDH_MGR_2402 Magnetos 61.1 7.6 0.00017 36.1 2.9 47 95-143 369-420 (457)
114 cd07112 ALDH_GABALDH-PuuC Esch 59.8 7.4 0.00016 36.5 2.6 47 95-143 375-426 (462)
115 KOG0447 Dynamin-like GTP bindi 58.1 26 0.00057 35.7 6.1 73 40-113 453-539 (980)
116 PLN02418 delta-1-pyrroline-5-c 56.9 8.9 0.00019 38.6 2.8 48 96-144 605-656 (718)
117 TIGR02518 EutH_ACDH acetaldehy 56.5 21 0.00045 34.2 5.1 49 95-144 344-400 (488)
118 cd07124 ALDH_PutA-P5CDH-RocA D 56.3 9.4 0.0002 36.4 2.7 48 95-143 420-471 (512)
119 PF03808 Glyco_tran_WecB: Glyc 53.7 49 0.0011 27.0 6.2 84 49-134 32-124 (172)
120 PF08442 ATP-grasp_2: ATP-gras 51.3 44 0.00096 28.6 5.8 102 51-158 4-135 (202)
121 TIGR01092 P5CS delta l-pyrroli 51.1 14 0.00031 37.1 3.2 48 95-143 598-649 (715)
122 PRK09756 PTS system N-acetylga 51.1 59 0.0013 26.8 6.3 79 64-144 29-112 (158)
123 TIGR03374 ABALDH 1-pyrroline d 50.9 12 0.00027 35.3 2.6 48 95-144 384-436 (472)
124 cd07084 ALDH_KGSADH-like ALDH 50.6 17 0.00037 34.0 3.4 48 95-142 348-401 (442)
125 cd07085 ALDH_F6_MMSDH Methylma 50.1 40 0.00086 31.7 5.8 49 95-144 386-438 (478)
126 cd07123 ALDH_F4-17_P5CDH Delta 49.7 12 0.00027 35.8 2.4 48 96-143 424-479 (522)
127 PTZ00381 aldehyde dehydrogenas 49.0 13 0.00028 35.6 2.4 68 95-163 348-434 (493)
128 cd07125 ALDH_PutA-P5CDH Delta( 47.6 13 0.00029 35.5 2.3 47 95-143 414-467 (518)
129 TIGR00696 wecB_tagA_cpsF bacte 47.0 49 0.0011 27.6 5.3 85 52-140 35-131 (177)
130 TIGR01236 D1pyr5carbox1 delta- 44.7 15 0.00034 35.4 2.2 49 95-143 424-480 (533)
131 TIGR03240 arg_catab_astD succi 42.5 36 0.00079 32.1 4.3 47 95-143 380-431 (484)
132 TIGR00854 pts-sorbose PTS syst 41.2 1E+02 0.0023 25.1 6.3 77 65-144 26-108 (151)
133 PRK15398 aldehyde dehydrogenas 41.1 42 0.0009 32.0 4.5 47 96-143 368-420 (465)
134 PF10727 Rossmann-like: Rossma 39.9 64 0.0014 25.6 4.7 81 4-100 15-103 (127)
135 PRK12470 amidase; Provisional 38.9 39 0.00085 31.9 3.9 96 44-142 19-123 (462)
136 PLN02419 methylmalonate-semial 38.7 22 0.00048 35.3 2.3 48 95-143 498-549 (604)
137 PF03807 F420_oxidored: NADP o 37.7 1.4E+02 0.0031 20.9 6.7 69 4-85 4-81 (96)
138 COG0593 DnaA ATPase involved i 37.2 2E+02 0.0044 27.5 8.3 62 2-74 88-153 (408)
139 KOG1208 Dehydrogenases with di 36.3 2.6E+02 0.0057 25.4 8.7 93 34-141 31-129 (314)
140 TIGR02288 PaaN_2 phenylacetic 36.2 63 0.0014 31.8 4.9 53 94-146 449-517 (551)
141 PF01329 Pterin_4a: Pterin 4 a 34.6 68 0.0015 23.9 3.9 32 83-114 8-49 (95)
142 PRK09457 astD succinylglutamic 34.4 73 0.0016 30.2 5.0 47 95-142 382-432 (487)
143 PF01408 GFO_IDH_MocA: Oxidore 33.7 1.9E+02 0.004 21.0 8.3 67 39-113 27-110 (120)
144 cd00001 PTS_IIB_man PTS_IIB, P 31.9 1.5E+02 0.0032 24.1 5.8 75 65-142 25-105 (151)
145 PF06470 SMC_hinge: SMC protei 28.6 69 0.0015 23.6 3.1 16 94-109 105-120 (120)
146 COG3842 PotA ABC-type spermidi 28.2 84 0.0018 29.4 4.2 68 73-141 168-239 (352)
147 PF03830 PTSIIB_sorb: PTS syst 27.8 1.2E+02 0.0026 24.7 4.5 77 64-143 25-107 (151)
148 cd07186 CofD_like LPPG:FO 2-ph 27.2 32 0.0007 31.6 1.2 12 3-14 187-198 (303)
149 cd08353 Glo_EDI_BRP_like_7 Thi 26.3 39 0.00085 25.3 1.4 30 112-141 86-115 (142)
150 TIGR01819 F420_cofD LPPG:FO 2- 26.2 34 0.00075 31.4 1.2 15 3-17 186-200 (297)
151 PRK01222 N-(5'-phosphoribosyl) 26.1 1.7E+02 0.0037 24.9 5.4 39 96-134 60-98 (210)
152 COG4567 Response regulator con 26.0 2.1E+02 0.0045 24.7 5.7 80 61-146 6-94 (182)
153 PRK00823 phhB pterin-4-alpha-c 25.7 1.2E+02 0.0026 22.8 3.9 31 83-113 9-50 (97)
154 PRK09201 amidase; Provisional 25.3 96 0.0021 29.3 4.0 95 45-141 18-123 (465)
155 cd02395 SF1_like-KH Splicing f 25.2 2.3E+02 0.0049 22.4 5.6 30 61-90 63-94 (120)
156 COG1136 SalX ABC-type antimicr 25.0 1.1E+02 0.0023 27.0 4.0 37 41-77 163-206 (226)
157 PRK13606 LPPG:FO 2-phospho-L-l 24.6 38 0.00083 31.1 1.2 15 3-17 189-203 (303)
158 COG3444 Phosphotransferase sys 24.2 2.3E+02 0.005 23.8 5.7 66 64-132 26-94 (159)
159 PRK08186 allophanate hydrolase 24.0 92 0.002 30.8 3.8 94 46-141 19-118 (600)
160 PF09960 DUF2194: Uncharacteri 23.9 1E+02 0.0023 30.7 4.1 120 34-167 315-471 (585)
161 PF08972 DUF1902: Domain of un 23.3 41 0.00088 23.7 0.9 29 93-121 22-50 (54)
162 COG2154 Pterin-4a-carbinolamin 22.5 1.3E+02 0.0028 23.5 3.6 32 83-114 9-51 (101)
163 PRK10291 glyoxalase I; Provisi 22.4 60 0.0013 24.0 1.7 32 114-145 66-97 (129)
164 PF00289 CPSase_L_chain: Carba 22.3 1.1E+02 0.0023 23.6 3.1 17 125-141 89-105 (110)
165 PF03709 OKR_DC_1_N: Orn/Lys/A 21.9 1.1E+02 0.0025 23.3 3.2 41 56-98 28-74 (115)
166 PRK11425 PTS system N-acetylga 21.5 3E+02 0.0064 22.6 5.8 16 95-110 79-94 (157)
167 PRK13958 N-(5'-phosphoribosyl) 21.2 1.3E+02 0.0028 25.5 3.7 38 96-133 58-95 (207)
168 PRK07486 amidase; Provisional 20.5 1.5E+02 0.0031 28.2 4.3 87 46-141 24-128 (484)
169 KOG2978 Dolichol-phosphate man 20.2 1.5E+02 0.0033 26.3 4.0 37 34-70 32-69 (238)
170 cd03237 ABC_RNaseL_inhibitor_d 20.2 63 0.0014 27.8 1.6 101 34-137 130-237 (246)
171 COG0014 ProA Gamma-glutamyl ph 20.1 1.1E+02 0.0024 29.5 3.4 46 95-141 319-368 (417)
No 1
>COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-75 Score=536.25 Aligned_cols=182 Identities=43% Similarity=0.661 Sum_probs=178.1
Q ss_pred CcEEecCCcHHHHHHHHHhhcccccccccccCc-cCCcceEEEEeCCCCCHHHHHHHHhhc--cCCCCceEEEecCchHh
Q 046320 1 AEKIFGPGNKYVTAAKMILQLQFFPAILKKSHD-KVQTAQVLVIADRYPSPLHVAADLLSQ--RGPDSQGVLVIVGDGVD 77 (198)
Q Consensus 1 VDkIvGPGN~yV~~AK~~v~~~~~~~~V~~gID-~AGPSEvlViAD~tAnp~~vAaDLLaQ--Hdp~a~avLvt~~~~l~ 77 (198)
||||+||||+|||+|||+|+|. | ||| +|||||++||||+++||+|||+||||| |||+|++||||+|++++
T Consensus 199 VdkIvGPGN~yVtaAKr~v~g~-----V--~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQAEHd~~a~aiLvT~s~~la 271 (425)
T COG0141 199 VDKIVGPGNAYVTAAKRLVSGV-----V--GIDMIAGPSEVLVIADETANPDFVAADLLSQAEHDPDAQAILVTDSEELA 271 (425)
T ss_pred cCeeeCCCcHHHHHHHHHhhCC-----c--ccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhhcCCCceEEEEeCcHHHH
Confidence 8999999999999999999885 8 999 999999999999999999999999999 99999999999999995
Q ss_pred HHHHHHHHHHHHhhCC------------ceEEEeCCHHHHHHHHhhhcCcceeecccChHHHHhccchhcccccCCCCcc
Q 046320 78 IKAIEEEIRMQCQSLP------------NFMVFAREIMRAITFSNLYAPEHLIVSAKDTEKWESIIENAGSMLFGEWTPE 145 (198)
Q Consensus 78 ~~~V~~~i~~~l~~l~------------g~iv~v~~l~eai~~~N~~APEHL~l~~~d~~~~l~~I~nAGsiFlG~~tp~ 145 (198)
++|.++|++||+.+| |.||+++|++||++++|+||||||+|+++||++++++|+|||+||||+|||+
T Consensus 272 -~~v~~~v~~~l~~l~~~ei~~~~l~~~g~iilv~~l~ea~~~~N~~APEHLei~~~~p~~~l~~I~nAGsIFlG~~sPe 350 (425)
T COG0141 272 -EAVEAAVERQLETLPRAEIARKALENYGAIILVDDLDEAVEISNEYAPEHLELQTENPRELLGKIRNAGSIFLGHYSPE 350 (425)
T ss_pred -HHHHHHHHHHHHhccHHHHHHHHHHhCCeEEEECCHHHHHHHHHhhChHhhhhhhcCHHHHHHHhcccceeeecCCCCc
Confidence 999999999999999 8999999999999999999999999999999999999999999999999999
Q ss_pred c-----------------cccccCCccccccccchHHHH------------HHHHHhhCCHHHHHHHHHHHHhh
Q 046320 146 S-----------------ARMYGGVSLDSFLKYVTVQSL------------ATMAEIEGLEAHKRAITLRLQDI 190 (198)
Q Consensus 146 a-----------------AR~~sgLsv~~FlK~~s~~~~------------~~lA~~EGL~aHa~si~~R~~~~ 190 (198)
+ |||+|||||+||+|++|+++| .+||++|||++|++|++.|++++
T Consensus 351 ~~GDY~aG~NHVLPT~g~AR~~s~L~v~dF~K~~tv~~~~~~~~~~l~~~~~~LA~~EgL~aHa~av~~R~~~~ 424 (425)
T COG0141 351 SLGDYAAGPNHVLPTSGTARFSSGLSVYDFLKRSTVQELSEEGLARLAETVITLAEAEGLTAHAEAVRIRLERL 424 (425)
T ss_pred cccccccCCCccCCCCccchhcCCccHHHhhhHHHHHHcCHHHHHHhHHHHHHHHHhcCcHHHHHHHHHHHhcc
Confidence 9 999999999999999999999 89999999999999999999764
No 2
>PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed
Probab=100.00 E-value=4.6e-75 Score=537.00 Aligned_cols=179 Identities=44% Similarity=0.669 Sum_probs=175.3
Q ss_pred CcEEecCCcHHHHHHHHHhhcccccccccccCc-cCCcceEEEEeCCCCCHHHHHHHHhhc--cCCCCceEEEecCchHh
Q 046320 1 AEKIFGPGNKYVTAAKMILQLQFFPAILKKSHD-KVQTAQVLVIADRYPSPLHVAADLLSQ--RGPDSQGVLVIVGDGVD 77 (198)
Q Consensus 1 VDkIvGPGN~yV~~AK~~v~~~~~~~~V~~gID-~AGPSEvlViAD~tAnp~~vAaDLLaQ--Hdp~a~avLvt~~~~l~ 77 (198)
|||||||||+||++|||+|+|. | ||| +|||||++||||++|||+|||+||||| |||+|++||||+|++++
T Consensus 203 VDkIvGPGN~yV~~AK~~v~g~-----V--~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQAEHd~~a~aiLvT~s~~la 275 (425)
T PRK00877 203 VDKIVGPGNIYVTAAKRLVFGV-----V--GIDMIAGPSEILVIADETADPDFVAADLLSQAEHDPDAQSILVTTSEELA 275 (425)
T ss_pred CcEEECCCcHHHHHHHHHHcCC-----c--CcCCCCCCceeEEEeCCCCCHHHHHHHHHHHhccCCCCcEEEEECCHHHH
Confidence 8999999999999999999885 9 999 999999999999999999999999999 99999999999999995
Q ss_pred HHHHHHHHHHHHhhCC------------ceEEEeCCHHHHHHHHhhhcCcceeecccChHHHHhccchhcccccCCCCcc
Q 046320 78 IKAIEEEIRMQCQSLP------------NFMVFAREIMRAITFSNLYAPEHLIVSAKDTEKWESIIENAGSMLFGEWTPE 145 (198)
Q Consensus 78 ~~~V~~~i~~~l~~l~------------g~iv~v~~l~eai~~~N~~APEHL~l~~~d~~~~l~~I~nAGsiFlG~~tp~ 145 (198)
++|+++|++||+.+| |.+++|+|+|||++++|+||||||+|+++|||+++++|+|||+||||+|||+
T Consensus 276 -~~V~~~v~~ql~~l~r~~ia~~sl~~~g~iivv~~leeai~~~N~~APEHLel~~~~p~~~l~~I~nAGaiFlG~~tp~ 354 (425)
T PRK00877 276 -EAVAAEVERQLATLPRAEIARASLEGQGAIILVDDLEEAIELSNAYAPEHLEIQTEDPRALLDRIRNAGAIFLGPYTPE 354 (425)
T ss_pred -HHHHHHHHHHHHhCChHHHHHHHHHhCCEEEEECCHHHHHHHHHhhChHheeehhCCHHHHHhhcCccceeccCCCCch
Confidence 999999999999999 8899999999999999999999999999999999999999999999999999
Q ss_pred c-----------------cccccCCccccccccchHHHH------------HHHHHhhCCHHHHHHHHHHH
Q 046320 146 S-----------------ARMYGGVSLDSFLKYVTVQSL------------ATMAEIEGLEAHKRAITLRL 187 (198)
Q Consensus 146 a-----------------AR~~sgLsv~~FlK~~s~~~~------------~~lA~~EGL~aHa~si~~R~ 187 (198)
+ |||+|||||+||||++|+|++ .+||++|||++|++|++.|+
T Consensus 355 a~GDY~aGpNHvLPT~G~AR~~sgLsV~~F~K~~s~~~~s~~~l~~l~~~~~~lA~~EGL~aHa~sv~~R~ 425 (425)
T PRK00877 355 SLGDYAAGPNHVLPTSGTARFSSGLSVYDFLKRSSVIELSKEGLKALGPAIVTLAEAEGLDAHARAVRVRL 425 (425)
T ss_pred hhhhcccCCCcccCCCcceeecCCccHHHhccceeEEEECHHHHHHHHHHHHHHHHhCCCHHHHHHHHhcC
Confidence 9 999999999999999999998 89999999999999999985
No 3
>PRK12447 histidinol dehydrogenase; Reviewed
Probab=100.00 E-value=6.8e-75 Score=535.78 Aligned_cols=184 Identities=32% Similarity=0.500 Sum_probs=178.8
Q ss_pred CcEEecCCcHHHHHHHHHhhcccccccccccCc-cCCcceEEEEeCCCCCHHHHHHHHhhc--cCCCCceEEEecCchHh
Q 046320 1 AEKIFGPGNKYVTAAKMILQLQFFPAILKKSHD-KVQTAQVLVIADRYPSPLHVAADLLSQ--RGPDSQGVLVIVGDGVD 77 (198)
Q Consensus 1 VDkIvGPGN~yV~~AK~~v~~~~~~~~V~~gID-~AGPSEvlViAD~tAnp~~vAaDLLaQ--Hdp~a~avLvt~~~~l~ 77 (198)
|||||||||+||++|||+|+|. | ||| +|||||++||||++|||+|||+||||| |||++++||||+|++++
T Consensus 198 VDkIvGPGN~yV~~AK~~v~g~-----V--~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQAEHd~~a~~iLvT~s~~la 270 (426)
T PRK12447 198 VDMLVGPGNAYVAEAKRQLFGR-----V--GIDLFAGPTETLVIADDTADPELVATDLLGQAEHGPNSPAVLITTSRKLA 270 (426)
T ss_pred CcEEECCCcHHHHHHHHHhcCc-----c--CcCCCCCCceeEEEeCCCCCHHHHHHHHHHHhccCCCCceEEEECCHHHH
Confidence 8999999999999999999885 9 999 999999999999999999999999999 99999999999999995
Q ss_pred HHHHHHHHHHHHhhCC------------ceEEEeCCHHHHHHHHhhhcCcceeecccChHHHHhccchhcccccCCCCcc
Q 046320 78 IKAIEEEIRMQCQSLP------------NFMVFAREIMRAITFSNLYAPEHLIVSAKDTEKWESIIENAGSMLFGEWTPE 145 (198)
Q Consensus 78 ~~~V~~~i~~~l~~l~------------g~iv~v~~l~eai~~~N~~APEHL~l~~~d~~~~l~~I~nAGsiFlG~~tp~ 145 (198)
++|.++|++||+.+| |.+++|+|++||++++|+||||||+|+++|||.++++|+|||+||||+|||+
T Consensus 271 -~~V~~~v~~ql~~l~r~~i~~~sl~~~g~ii~v~~l~ea~~~~N~~APEHLel~~~~~~~~l~~i~nAGaiFlG~~sp~ 349 (426)
T PRK12447 271 -EEVLAEIERLLAILPTADVASAAWRDYGEVILCDDLEEMVAEADRYASEHVQVMTEDPDWFLENMTNYGALFLGERTNV 349 (426)
T ss_pred -HHHHHHHHHHHHhCCHHHHHHHHHHhCCEEEEECCHHHHHHHHHhhChHheeehhCCHHHHHhhcCccceeccCCCCch
Confidence 999999999999999 8899999999999999999999999999999999999999999999999999
Q ss_pred c-----------------cccccCCccccccccchHHHH------------HHHHHhhCCHHHHHHHHHHHHhhhh
Q 046320 146 S-----------------ARMYGGVSLDSFLKYVTVQSL------------ATMAEIEGLEAHKRAITLRLQDIAA 192 (198)
Q Consensus 146 a-----------------AR~~sgLsv~~FlK~~s~~~~------------~~lA~~EGL~aHa~si~~R~~~~~~ 192 (198)
+ |||+|||||+||||++|+|+| .+||++|||++|++|++.|+++++.
T Consensus 350 a~GDY~aGpNHvLPT~G~Ar~~sgLsv~~FlK~~s~~~~s~~~l~~l~~~~~~lA~~EGL~aHa~av~~R~~~~~~ 425 (426)
T PRK12447 350 AYGDKVIGTNHVLPTSGAARYTGGLWVGKFLKTVTYQRVTDEASAEIGEYCSRLCRLEGFEGHARQADIRVRRYGG 425 (426)
T ss_pred hhhhcccCCCcccCCCcceeecCCCcHHHhccceeEEEECHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHhcC
Confidence 9 999999999999999999988 8999999999999999999986543
No 4
>PRK13770 histidinol dehydrogenase; Provisional
Probab=100.00 E-value=1.3e-74 Score=532.53 Aligned_cols=179 Identities=26% Similarity=0.412 Sum_probs=175.3
Q ss_pred CcEEecCCcHHHHHHHHHhhcccccccccccCc-cCCcceEEEEeCCCCCHHHHHHHHhhc--cCCCCceEEEecCchHh
Q 046320 1 AEKIFGPGNKYVTAAKMILQLQFFPAILKKSHD-KVQTAQVLVIADRYPSPLHVAADLLSQ--RGPDSQGVLVIVGDGVD 77 (198)
Q Consensus 1 VDkIvGPGN~yV~~AK~~v~~~~~~~~V~~gID-~AGPSEvlViAD~tAnp~~vAaDLLaQ--Hdp~a~avLvt~~~~l~ 77 (198)
|||||||||+||++|||+|+|. | ||| +|||||++||||++|||+|||+||||| |||++++||||+|++++
T Consensus 193 VDkIvGPGN~yV~~AK~~v~g~-----V--~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd~~a~~iLvT~s~~la 265 (416)
T PRK13770 193 VDKIVGPGNQFVAYAKKYLFGQ-----V--GIDQIAGPTEIALIIDETADLDAIVYDVFAQAEHDELARTYVISEDAQVL 265 (416)
T ss_pred CcEEECCCcHHHHHHHHHhcCC-----c--CcCCCCCCceeEEEecCCCCHHHHHHHHHHHhccCCCCcEEEEeCCHHHH
Confidence 8999999999999999999885 9 999 999999999999999999999999999 99999999999999995
Q ss_pred HHHHHHHHHHHHhhCC------------ceEEEeCCHHHHHHHHhhhcCcceeecccChHHHHhccchhcccccCCCCcc
Q 046320 78 IKAIEEEIRMQCQSLP------------NFMVFAREIMRAITFSNLYAPEHLIVSAKDTEKWESIIENAGSMLFGEWTPE 145 (198)
Q Consensus 78 ~~~V~~~i~~~l~~l~------------g~iv~v~~l~eai~~~N~~APEHL~l~~~d~~~~l~~I~nAGsiFlG~~tp~ 145 (198)
++|.++|++||+.+| |.+++|+|++||++++|+||||||+|+++||++++++|||||+||||+|||+
T Consensus 266 -~~V~~ev~~ql~~lpr~~i~~~al~~~g~ii~v~~~eeai~~~N~~APEHLel~~~~~~~~l~~i~nAGaiFlG~~sp~ 344 (416)
T PRK13770 266 -KDLESRIAKALPNVDRYDIVSKSIANQHYLIHASNFDEACHVMNTIAPEHASIQTVNPQPYIEKVKYVGALFIGHYSPE 344 (416)
T ss_pred -HHHHHHHHHHHHhCChHHHHHHHHHhCCEEEEECCHHHHHHHHHhhChHhheehhCCHHHHHhhCCEeceeccCCCCch
Confidence 999999999999999 7899999999999999999999999999999999999999999999999999
Q ss_pred c-----------------cccccCCccccccccchHHHH------------HHHHHhhCCHHHHHHHHHHH
Q 046320 146 S-----------------ARMYGGVSLDSFLKYVTVQSL------------ATMAEIEGLEAHKRAITLRL 187 (198)
Q Consensus 146 a-----------------AR~~sgLsv~~FlK~~s~~~~------------~~lA~~EGL~aHa~si~~R~ 187 (198)
+ |||+|||||+||||++|+|+| .+||++|||++|++|+++|+
T Consensus 345 a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~~s~~~l~~l~~~~~~lA~~EGL~aHa~sv~~R~ 415 (416)
T PRK13770 345 VIGDYVAGPSHVLPTNRTARFTNGLSVNDFLTRNTVIHLSKDTFEQIADSAQHIAHVEALYNHQQSILIRQ 415 (416)
T ss_pred hhhccccCCCCcCCCCcceeccCCCcHHHeecceeeEEECHHHHHHHHHHHHHHHHhCCCHHHHHHHHHhc
Confidence 9 999999999999999999998 89999999999999999996
No 5
>TIGR00069 hisD histidinol dehydrogenase. This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein.
Probab=100.00 E-value=2.2e-74 Score=528.08 Aligned_cols=178 Identities=47% Similarity=0.713 Sum_probs=174.3
Q ss_pred CcEEecCCcHHHHHHHHHhhcccccccccccCc-cCCcceEEEEeCCCCCHHHHHHHHhhc--cCCCCceEEEecCchHh
Q 046320 1 AEKIFGPGNKYVTAAKMILQLQFFPAILKKSHD-KVQTAQVLVIADRYPSPLHVAADLLSQ--RGPDSQGVLVIVGDGVD 77 (198)
Q Consensus 1 VDkIvGPGN~yV~~AK~~v~~~~~~~~V~~gID-~AGPSEvlViAD~tAnp~~vAaDLLaQ--Hdp~a~avLvt~~~~l~ 77 (198)
||||+||||+||++|||+|+|. | ||| +|||||++||||++|||+|||+||||| |||+|++||||+|.+++
T Consensus 172 VDkIvGPGN~yV~~AK~~v~g~-----V--~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd~~a~~iLvT~s~~la 244 (393)
T TIGR00069 172 VDKIVGPGNIYVTAAKKLVFGD-----V--GIDMPAGPSEVLVIADETANPEFVAADLLSQAEHDPDAQAILVTTSEELA 244 (393)
T ss_pred CcEEECCCcHHHHHHHHHhcCc-----c--CcCCCCCCceEEEEeCCCCCHHHHHHHHHHHhccCCCCcEEEEECCHHHH
Confidence 8999999999999999999885 9 999 999999999999999999999999999 99999999999999995
Q ss_pred HHHHHHHHHHHHhhCC------------ceEEEeCCHHHHHHHHhhhcCcceeecccChHHHHhccchhcccccCCCCcc
Q 046320 78 IKAIEEEIRMQCQSLP------------NFMVFAREIMRAITFSNLYAPEHLIVSAKDTEKWESIIENAGSMLFGEWTPE 145 (198)
Q Consensus 78 ~~~V~~~i~~~l~~l~------------g~iv~v~~l~eai~~~N~~APEHL~l~~~d~~~~l~~I~nAGsiFlG~~tp~ 145 (198)
++|+++|++||+.+| |.+++|+|++||++++|+||||||+|+++|||+++++|+|||+||||+|||+
T Consensus 245 -~~V~~~v~~ql~~l~r~~i~~~al~~~g~ii~v~~l~ea~~~~N~~APEHLel~~~~p~~~l~~I~nAGaiFlG~~tp~ 323 (393)
T TIGR00069 245 -EAVQEEIERQLATLPRREIARKSLEDNGAIILVDDLEEAIEISNDYAPEHLELQTKNPEELLPKIRNAGSIFLGPYTPE 323 (393)
T ss_pred -HHHHHHHHHHHHhCChHHHHHHHHHhCCEEEEECCHHHHHHHHHhhChHhheehhCCHHHHHhhcCccceeccCCCCch
Confidence 999999999999998 8899999999999999999999999999999999999999999999999999
Q ss_pred c-----------------cccccCCccccccccchHHHH------------HHHHHhhCCHHHHHHHHHH
Q 046320 146 S-----------------ARMYGGVSLDSFLKYVTVQSL------------ATMAEIEGLEAHKRAITLR 186 (198)
Q Consensus 146 a-----------------AR~~sgLsv~~FlK~~s~~~~------------~~lA~~EGL~aHa~si~~R 186 (198)
+ |||+|||||+||||++|+|++ .+||++|||++|++|++.|
T Consensus 324 a~GDY~aG~NHvLPT~G~Ar~~sgL~v~~F~K~~s~~~~s~~~l~~l~~~~~~lA~~EGL~aHa~sv~~R 393 (393)
T TIGR00069 324 AAGDYAAGPNHVLPTGGTARFYSGLSVLDFLKRITVQRLSKEGLAELAPAVETLAEAEGLEAHANSVRIR 393 (393)
T ss_pred hhhhccCCCCcccCCCcceeecCCccHHHhccceeEEEECHHHHHHHHHHHHHHHHhCCChHHHHHHhcC
Confidence 9 999999999999999999998 8999999999999999887
No 6
>PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine. In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.
Probab=100.00 E-value=3.5e-74 Score=529.67 Aligned_cols=180 Identities=45% Similarity=0.706 Sum_probs=146.9
Q ss_pred CcEEecCCcHHHHHHHHHhhcccccccccccCc-cCCcceEEEEeCCCCCHHHHHHHHhhc--cCCCCceEEEecCchHh
Q 046320 1 AEKIFGPGNKYVTAAKMILQLQFFPAILKKSHD-KVQTAQVLVIADRYPSPLHVAADLLSQ--RGPDSQGVLVIVGDGVD 77 (198)
Q Consensus 1 VDkIvGPGN~yV~~AK~~v~~~~~~~~V~~gID-~AGPSEvlViAD~tAnp~~vAaDLLaQ--Hdp~a~avLvt~~~~l~ 77 (198)
|||||||||.||++|||+|+|. | ||| +|||||++||||++|||+|||+||||| |||+|+++|||+|++++
T Consensus 190 VDkIvGPGN~yV~~AK~~v~g~-----V--~ID~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd~~a~~vLvt~s~~la 262 (412)
T PF00815_consen 190 VDKIVGPGNAYVTAAKRLVFGD-----V--GIDMIAGPSEVLVIADETANPEFVAADLLAQAEHDPDAQAVLVTTSEELA 262 (412)
T ss_dssp -SEEE---SHHHHHHHHHHHHS--------EES------EEEEEE-TTS-HHHHHHHHHHHHTT-TT-EEEEEES-HHHH
T ss_pred eeEEECCCcHHHHHHHHHhcCC-----c--ccCCCCCCCceEEEECCCCCHHHHHHHHHHHhccCCCCceEEEECCHHHH
Confidence 8999999999999999999885 9 999 999999999999999999999999999 99999999999999995
Q ss_pred HHHHHHHHHHHHhhCC-----------ceEEEeCCHHHHHHHHhhhcCcceeecccChHHHHhccchhcccccCCCCccc
Q 046320 78 IKAIEEEIRMQCQSLP-----------NFMVFAREIMRAITFSNLYAPEHLIVSAKDTEKWESIIENAGSMLFGEWTPES 146 (198)
Q Consensus 78 ~~~V~~~i~~~l~~l~-----------g~iv~v~~l~eai~~~N~~APEHL~l~~~d~~~~l~~I~nAGsiFlG~~tp~a 146 (198)
++|.++|++||+.+| |.+++|+|++||++++|+||||||+|+++||++++++|+|||+||||+|||++
T Consensus 263 -~~V~~~v~~~l~~l~r~~i~~~sl~~g~ii~~~~l~ea~~~~N~~APEHLel~~~~~~~~~~~i~~AGaiFlG~~tp~a 341 (412)
T PF00815_consen 263 -EAVEAEVERQLEELPRREIAEKSLENGAIIVVDSLEEAIELANEYAPEHLELQVEDPEELLEKIRNAGAIFLGEYTPEA 341 (412)
T ss_dssp -HHHHHHHHHHHTT-TTHHHHHHHHTT-EEEE-SSHHHHHHHHHHH--SEEEEESTTHHHHGGG--S-SEEEESTT--HH
T ss_pred -HHHHHHHHHHHHhCCchHHHHHHHHCCeEEEECCHHHHHHHHHHhhHHHHHHHHcCHHHHHHHhhccChhhcCCCCCHH
Confidence 999999999999999 89999999999999999999999999999999999999999999999999999
Q ss_pred -----------------cccccCCccccccccchHHHH------------HHHHHhhCCHHHHHHHHHHHH
Q 046320 147 -----------------ARMYGGVSLDSFLKYVTVQSL------------ATMAEIEGLEAHKRAITLRLQ 188 (198)
Q Consensus 147 -----------------AR~~sgLsv~~FlK~~s~~~~------------~~lA~~EGL~aHa~si~~R~~ 188 (198)
|||+|||||+||||++|+|++ .+||++|||.+|++|++.|++
T Consensus 342 ~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~~s~~~~~~~~~~~~~lA~~EGL~aHa~sv~~R~e 412 (412)
T PF00815_consen 342 LGDYAAGPNHVLPTGGTARFSSGLSVDDFLKRISVQRYSKEGLKKLAPAVARLAEAEGLEAHARSVRIRLE 412 (412)
T ss_dssp HHHHTSSS------TTGGGT---S-GGGGEEEEEEEEE-HHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHH
T ss_pred HhhhccCCCccCCCCccccccCCCcHHHccceeeEEEECHHHHHHHHHHHHHHHHhCCCHHHHHHHHHhcC
Confidence 999999999999999999987 899999999999999999985
No 7
>PLN02926 histidinol dehydrogenase
Probab=100.00 E-value=2e-73 Score=526.62 Aligned_cols=184 Identities=70% Similarity=1.044 Sum_probs=177.9
Q ss_pred CcEEecCCcHHHHHHHHHhhcccccccccccCc-cCCcceEEEEeCCCCCHHHHHHHHhhc--cCCCCceEEEecCchHh
Q 046320 1 AEKIFGPGNKYVTAAKMILQLQFFPAILKKSHD-KVQTAQVLVIADRYPSPLHVAADLLSQ--RGPDSQGVLVIVGDGVD 77 (198)
Q Consensus 1 VDkIvGPGN~yV~~AK~~v~~~~~~~~V~~gID-~AGPSEvlViAD~tAnp~~vAaDLLaQ--Hdp~a~avLvt~~~~l~ 77 (198)
|||||||||+||++|||+|+|. +|.| ||| +|||||++||||++|||+|+|+||||| |||++++||||+|++++
T Consensus 204 VDkIvGPGN~yV~~AK~~v~G~--~~~V--gID~~AGPSEvlIiAD~tA~p~~vAaDLLaQAEHdp~a~aiLvT~s~~la 279 (431)
T PLN02926 204 VDKIFGPGNQYVTAAKMILQNS--EAMV--SIDMPAGPSEVLVIADKTANPVHVAADLLSQAEHGPDSQVVLVAVGDVDL 279 (431)
T ss_pred CCEEECCCcHHHHHHHHHhhCC--CCcc--ccCCCCCCceeEEEeCCCCCHHHHHHHHHHHhccCCCCcEEEEECCHHHH
Confidence 8999999999999999999872 3458 999 999999999999999999999999999 99999999999999995
Q ss_pred HHHHHHHHHHHHhhCC-----------ceEEEeCCHHHHHHHHhhhcCcceeecccChHHHHhccchhcccccCCCCccc
Q 046320 78 IKAIEEEIRMQCQSLP-----------NFMVFAREIMRAITFSNLYAPEHLIVSAKDTEKWESIIENAGSMLFGEWTPES 146 (198)
Q Consensus 78 ~~~V~~~i~~~l~~l~-----------g~iv~v~~l~eai~~~N~~APEHL~l~~~d~~~~l~~I~nAGsiFlG~~tp~a 146 (198)
++|+++|++||+.+| |.+++|+|++||++++|+||||||+|+++|||.++++|+|||+||||+|||++
T Consensus 280 -~~V~~~v~~ql~~l~r~~i~~~sl~~g~iivv~~l~ea~~~~N~~APEHLei~~~~~~~~l~~i~nAGaiFlG~~sp~a 358 (431)
T PLN02926 280 -DAIEEEVEKQCQSLPRGEIASKALGHSFIVVARDMAEAISFSNLYAPEHLIVNVEDAESWLDKIDNAGSVFLGRWTPES 358 (431)
T ss_pred -HHHHHHHHHHHHhCChHHHHHHHHHCCEEEEECCHHHHHHHHHhhChHhheehhcCHHHHHhhcCccceeccCCCCchh
Confidence 999999999999999 88999999999999999999999999999999999999999999999999999
Q ss_pred -----------------cccccCCccccccccchHHHH------------HHHHHhhCCHHHHHHHHHHHHh
Q 046320 147 -----------------ARMYGGVSLDSFLKYVTVQSL------------ATMAEIEGLEAHKRAITLRLQD 189 (198)
Q Consensus 147 -----------------AR~~sgLsv~~FlK~~s~~~~------------~~lA~~EGL~aHa~si~~R~~~ 189 (198)
|||+|||||+||||++|+|++ .+||++|||++|++|++.|+++
T Consensus 359 ~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~~s~~~l~~l~~~~~~lA~~EGL~aHa~sv~~R~~~ 430 (431)
T PLN02926 359 VGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLQNLGPYVARMAEVEGLEAHKRAVTLRLGD 430 (431)
T ss_pred hhccccCcCcccCCCcceeecCCCcHHHhcceeeEEEECHHHHHHHHHHHHHHHHhcCChHHHHHHHHhhhc
Confidence 999999999999999999998 8999999999999999999865
No 8
>cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E.C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway.
Probab=100.00 E-value=8.1e-71 Score=504.68 Aligned_cols=171 Identities=49% Similarity=0.744 Sum_probs=167.8
Q ss_pred CcEEecCCcHHHHHHHHHhhcccccccccccCc-cCCcceEEEEeCCCCCHHHHHHHHhhc--cCCCCceEEEecCchHh
Q 046320 1 AEKIFGPGNKYVTAAKMILQLQFFPAILKKSHD-KVQTAQVLVIADRYPSPLHVAADLLSQ--RGPDSQGVLVIVGDGVD 77 (198)
Q Consensus 1 VDkIvGPGN~yV~~AK~~v~~~~~~~~V~~gID-~AGPSEvlViAD~tAnp~~vAaDLLaQ--Hdp~a~avLvt~~~~l~ 77 (198)
||||+||||+||++|||+|+|. | ||| +|||||++||||++|||+|||+||||| |||+|++||||+|++++
T Consensus 176 VDkIvGPGN~yV~~AK~~v~g~-----V--~ID~~AGPSEvlIiAD~~A~p~~vAaDLLaQAEH~~~a~aiLvT~s~~la 248 (390)
T cd06572 176 VDKIVGPGNIYVTAAKRLVSGD-----V--GIDMPAGPSEVLVIADETANPEFVAADLLSQAEHDPDSQAILVTTSEELA 248 (390)
T ss_pred CCEeeCCchHHHHHHHHHhcCC-----c--CccCCCCCceEEEEeCCCCCHHHHHHHHHhhhccCCCCeEEEEECCHHHH
Confidence 8999999999999999999885 8 999 999999999999999999999999999 99999999999999995
Q ss_pred HHHHHHHHHHHHhhCC------------ceEEEeCCHHHHHHHHhhhcCcceeecccChHHHHhccchhcccccCCCCcc
Q 046320 78 IKAIEEEIRMQCQSLP------------NFMVFAREIMRAITFSNLYAPEHLIVSAKDTEKWESIIENAGSMLFGEWTPE 145 (198)
Q Consensus 78 ~~~V~~~i~~~l~~l~------------g~iv~v~~l~eai~~~N~~APEHL~l~~~d~~~~l~~I~nAGsiFlG~~tp~ 145 (198)
++|++++++||+.+| |.+++|+|++||++++|+||||||+|+++||+.++++|+|||+||||+|||+
T Consensus 249 -~~V~~~v~~ql~~l~r~~~~~~~~~~~g~ii~~~~~~eai~~~N~~APEHLel~~~~~~~~l~~i~nAGsiFlG~~tp~ 327 (390)
T cd06572 249 -EAVEEEVERQLAELPRREIAAKSLLDYGAIILVDDLEEAIELANEYAPEHLELQTEDPEELLEKIRNAGSIFLGPYTPE 327 (390)
T ss_pred -HHHHHHHHHHHHhCCcHHHHHHHHHhCCEEEEECCHHHHHHHHHhhchhhheeHhcCHHHHHhhCccceEEeecCCCch
Confidence 999999999999998 8899999999999999999999999999999999999999999999999999
Q ss_pred c-----------------cccccCCccccccccchHHHH------------HHHHHhhCCHHH
Q 046320 146 S-----------------ARMYGGVSLDSFLKYVTVQSL------------ATMAEIEGLEAH 179 (198)
Q Consensus 146 a-----------------AR~~sgLsv~~FlK~~s~~~~------------~~lA~~EGL~aH 179 (198)
+ |||+|||||+||||++|+|++ .+||++|||++|
T Consensus 328 a~GDY~aGpNHvLPT~G~Ar~~sgL~v~~F~K~~s~~~~s~~~l~~l~~~~~~lA~~EGl~aH 390 (390)
T cd06572 328 ALGDYAAGPNHVLPTGGTARFYSGLSVDDFLKRITVQEYSKEGLRALAPAVATLAEAEGLEAH 390 (390)
T ss_pred hhhccccCCCCccCCCcceeecCCCCHHHheecceeEEECHHHHHHHHHHHHHHHHhcCCcCC
Confidence 9 999999999999999999998 899999999998
No 9
>PRK13769 histidinol dehydrogenase; Provisional
Probab=100.00 E-value=2.9e-67 Score=477.96 Aligned_cols=169 Identities=28% Similarity=0.356 Sum_probs=161.5
Q ss_pred CcEEecCCcHHHHHHHHHhhcccccccccccCc-cCCcceEEEEeCCCCCHHHHHHHHhhc--cCCCCceEEEecCchHh
Q 046320 1 AEKIFGPGNKYVTAAKMILQLQFFPAILKKSHD-KVQTAQVLVIADRYPSPLHVAADLLSQ--RGPDSQGVLVIVGDGVD 77 (198)
Q Consensus 1 VDkIvGPGN~yV~~AK~~v~~~~~~~~V~~gID-~AGPSEvlViAD~tAnp~~vAaDLLaQ--Hdp~a~avLvt~~~~l~ 77 (198)
|||||||||+||++|||+|+|. | ||| +|||||++||||+ +||+|||+||||| |||+|++||||+|.+++
T Consensus 167 VDkIvGPGN~yV~~AK~~v~g~-----V--~ID~~AGPSEvlViAD~-a~p~~vAaDLLaQAEH~~~a~~iLvT~s~~la 238 (368)
T PRK13769 167 VDMVAGPGGLYVQAAKYVLSQY-----V--GIDGIEGPTELVVYAEG-VPPEVAVRGALAQLEHGPTSFAYLLSTDAELL 238 (368)
T ss_pred cCEEECCCcHHHHHHHHHHhCC-----c--CCCCcCCCcceEEEcCC-CCHHHHHHHHHHHhhcCCCCcEEEEECCHHHH
Confidence 8999999999999999999885 9 999 9999999999998 9999999999999 99999999999999995
Q ss_pred HHHHHHHHHHHHhhCC---ceEEEeCCHHHHHHHHhhhcCcceeecccChHHHHhccchhcccccCCCCccc--------
Q 046320 78 IKAIEEEIRMQCQSLP---NFMVFAREIMRAITFSNLYAPEHLIVSAKDTEKWESIIENAGSMLFGEWTPES-------- 146 (198)
Q Consensus 78 ~~~V~~~i~~~l~~l~---g~iv~v~~l~eai~~~N~~APEHL~l~~~d~~~~l~~I~nAGsiFlG~~tp~a-------- 146 (198)
++|++++++|+.. + |++++|+|++||++++|+||||||+|++ |+.++++|||||+||| |||++
T Consensus 239 -~~V~~~v~~~~~~-~~~~~~iivv~~leeai~~~N~~APEHLel~~--~~~~~~~i~nAGsiFl--~~p~a~GDY~aGp 312 (368)
T PRK13769 239 -KAAEEIYRRERTS-SMGPLEVRKVAGVEEAVRFIDEIAPEHLEVWG--RREVAYRVRNVGAVSV--NMPSPYLDYVAGI 312 (368)
T ss_pred -HHHHHHHHHHHHh-cCCCCeEEEECCHHHHHHHHHhhChHheEeeC--cHHHHhhCCccCChhc--CCchhhhccccCC
Confidence 9999999999877 5 4499999999999999999999999999 7889999999999999 78988
Q ss_pred ---------cccccCCccccccccchHHHH----------HHHHHhhCCHHHHHHH
Q 046320 147 ---------ARMYGGVSLDSFLKYVTVQSL----------ATMAEIEGLEAHKRAI 183 (198)
Q Consensus 147 ---------AR~~sgLsv~~FlK~~s~~~~----------~~lA~~EGL~aHa~si 183 (198)
|||+|||||+||||++|+|++ .+||++|||++|++|+
T Consensus 313 NHvLPT~G~AR~~sgLsv~~FlK~~t~~~~~~~~~l~~~~~~lA~~EGL~aHa~s~ 368 (368)
T PRK13769 313 SHVLPTGGTARWRGIITPLTFMKPIGVAEAVGELELAEAARRLAEYEGFQYHREAL 368 (368)
T ss_pred CCcCCCCcceeccCCCcHHHcccceeEEEehhHHHHHHHHHHHHHhCCChhHHhcC
Confidence 999999999999999999988 8999999999999984
No 10
>KOG2697 consensus Histidinol dehydrogenase [Amino acid transport and metabolism]
Probab=100.00 E-value=7e-61 Score=429.66 Aligned_cols=191 Identities=64% Similarity=0.989 Sum_probs=182.1
Q ss_pred CcEEecCCcHHHHHHHHHhhcccccccccccCc-cCCcceEEEEeCCCCCHHHHHHHHhhc--cCCCCceEEEecC--ch
Q 046320 1 AEKIFGPGNKYVTAAKMILQLQFFPAILKKSHD-KVQTAQVLVIADRYPSPLHVAADLLSQ--RGPDSQGVLVIVG--DG 75 (198)
Q Consensus 1 VDkIvGPGN~yV~~AK~~v~~~~~~~~V~~gID-~AGPSEvlViAD~tAnp~~vAaDLLaQ--Hdp~a~avLvt~~--~~ 75 (198)
||||+||||.|||+||+.|+++ ..+.| +|| +||||||+||||+++||++||+||||| ||||||.||++.+ .+
T Consensus 210 V~KIfGPGNQfVTAAKM~vQNd-~~Alv--sIDmPAGPSEVLVIADE~a~p~~vA~DLLSQAEHG~DSQviLv~V~lS~~ 286 (446)
T KOG2697|consen 210 VEKIFGPGNQFVTAAKMIVQND-YEALV--SIDMPAGPSEVLVIADEHASPVYVAADLLSQAEHGPDSQVILVVVGLSVD 286 (446)
T ss_pred hhhhcCCchhhhhhhhhheecc-ccceE--EeccCCCCceEEEEecCCCChHHHHHHHHhHhhcCCCceEEEEEecCCHH
Confidence 7999999999999999999763 46889 999 999999999999999999999999999 9999999999766 45
Q ss_pred HhHHHHHHHHHHHHhhCC-----------ceEEEeCCHHHHHHHHhhhcCcceeecccChHHHHhccchhcccccCCCCc
Q 046320 76 VDIKAIEEEIRMQCQSLP-----------NFMVFAREIMRAITFSNLYAPEHLIVSAKDTEKWESIIENAGSMLFGEWTP 144 (198)
Q Consensus 76 l~~~~V~~~i~~~l~~l~-----------g~iv~v~~l~eai~~~N~~APEHL~l~~~d~~~~l~~I~nAGsiFlG~~tp 144 (198)
. +++++++|.+|...|| +.++.|++++||++|+|.||||||.|+++|+++|...|.||||+|+|+|||
T Consensus 287 ~-~~~Iq~ai~~qal~LpR~~i~~kai~hS~iV~~d~~~eA~e~SNlYaPEHLil~vknA~~y~~lidNAGSVFvGpwtP 365 (446)
T KOG2697|consen 287 M-LNAIQEAIAKQALSLPRGEIASKAISHSFIVFADDMIEAIEFSNLYAPEHLILNVKNAEKYEGLIDNAGSVFVGPWTP 365 (446)
T ss_pred H-HHHHHHHHHHHHhcCcHHHHHHHHhhhceEEEecCHHHHHhhhhccCchhheeeccchhhhhhhhccCCceeecCCCc
Confidence 5 4999999999999999 789999999999999999999999999999999999999999999999999
Q ss_pred cc-----------------cccccCCccccccccchHHHH------------HHHHHhhCCHHHHHHHHHHHHhhhhhhc
Q 046320 145 ES-----------------ARMYGGVSLDSFLKYVTVQSL------------ATMAEIEGLEAHKRAITLRLQDIAARQV 195 (198)
Q Consensus 145 ~a-----------------AR~~sgLsv~~FlK~~s~~~~------------~~lA~~EGL~aHa~si~~R~~~~~~~~~ 195 (198)
++ ||.+||.|.++|+|.+|.|++ +++|+.|||++|++++++|+.++..+|+
T Consensus 366 eS~GDYaSGTNHtLPTYGYAr~YSGvstdsFlKfiT~Q~lTeEGl~nlGp~V~~~Ae~EGLdaH~~AV~~R~~~l~~~~~ 445 (446)
T KOG2697|consen 366 ESVGDYASGTNHTLPTYGYARMYSGVSTDSFLKFITVQSLTEEGLRNLGPYVATMAEIEGLDAHKRAVTLRLKDLEAKQL 445 (446)
T ss_pred ccccccccCCCccCcccchhhhccCccHHHHHHHHHHhhcCHHHHhhhchHhhhHHhhccchhhhhheEEeeccccceeC
Confidence 99 999999999999999999998 8999999999999999999999988876
No 11
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=95.53 E-value=0.087 Score=47.04 Aligned_cols=107 Identities=11% Similarity=0.023 Sum_probs=68.8
Q ss_pred cCCcceEEEEeCCCCCHHHHHHHHhhc------cCCCCceEEEecCchHhHHHHHHHHHHHHhhCC--------------
Q 046320 34 KVQTAQVLVIADRYPSPLHVAADLLSQ------RGPDSQGVLVIVGDGVDIKAIEEEIRMQCQSLP-------------- 93 (198)
Q Consensus 34 ~AGPSEvlViAD~tAnp~~vAaDLLaQ------Hdp~a~avLvt~~~~l~~~~V~~~i~~~l~~l~-------------- 93 (198)
..|.| .+|-|+++|.+.+|..++.- +...+...++.... +. +++.+.+.-.+...+
T Consensus 202 ~~g~~--~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s~~~v~v~~~-~~-~~f~~~l~tl~~~~~~~~~~~~~E~fgPv 277 (367)
T cd06534 202 LGGKS--PVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRLLVHES-IY-DEFVEKLVTVLVDVDPDMPIAQEEIFGPV 277 (367)
T ss_pred cCCCC--eEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHH-HH-HHHHHhhceeeeCCCCCCccccCCccCce
Confidence 55655 55556669999887777644 33444444444333 53 666666653333322
Q ss_pred ceEEEeCCHHHHHHHHhhhcCc-ceeecccChH---HHHhccchhcccccCCCCcc
Q 046320 94 NFMVFAREIMRAITFSNLYAPE-HLIVSAKDTE---KWESIIENAGSMLFGEWTPE 145 (198)
Q Consensus 94 g~iv~v~~l~eai~~~N~~APE-HL~l~~~d~~---~~l~~I~nAGsiFlG~~tp~ 145 (198)
-.++.+++++|+++++|..-.= -..|.++|+. ++..++ .+|.+|++..+..
T Consensus 278 ~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~-~~g~v~iN~~~~~ 332 (367)
T cd06534 278 LPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERL-RAGTVYINDSSIG 332 (367)
T ss_pred EEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhC-CcceEEECCCCCC
Confidence 2567789999999999986433 3677888874 455555 7999999976554
No 12
>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.
Probab=93.37 E-value=0.49 Score=43.38 Aligned_cols=47 Identities=19% Similarity=0.176 Sum_probs=35.5
Q ss_pred eEEEeCCHHHHHHHHhhhcCcce--eecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPEHL--IVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEHL--~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|.+||++++|.. |..| .|.++|+. .+..+++ +|.+++...+
T Consensus 343 ~v~~~~~~~eai~~~n~~-~~gl~~~i~t~d~~~~~~~~~~l~-~g~v~iN~~~ 394 (431)
T cd07104 343 PVIPFDDDEEAVELANDT-EYGLSAAVFTRDLERAMAFAERLE-TGMVHINDQT 394 (431)
T ss_pred EEEEECCHHHHHHHHhCC-CCCceEEEEcCCHHHHHHHHHhcC-cCeEEECCCC
Confidence 456678999999999985 4444 77888864 5566665 9999998654
No 13
>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=92.97 E-value=0.59 Score=43.11 Aligned_cols=47 Identities=21% Similarity=0.176 Sum_probs=35.2
Q ss_pred eEEEeCCHHHHHHHHhhhcCcce--eecccCh---HHHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPEHL--IVSAKDT---EKWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEHL--~l~~~d~---~~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|++||++++|. .+-.| .|.++|. +++.++++ +|.|+++..+
T Consensus 365 ~v~~~~~~~eai~~~n~-~~~gLt~~v~t~d~~~~~~~~~~l~-~g~v~iN~~~ 416 (453)
T cd07149 365 SLNPFDTLDEAIAMAND-SPYGLQAGVFTNDLQKALKAARELE-VGGVMINDSS 416 (453)
T ss_pred EEEEeCCHHHHHHHHhC-CCcCceEEEEcCCHHHHHHHHHHcC-cCeEEECCCC
Confidence 35557899999999997 34444 5666776 46777776 8999999754
No 14
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=90.92 E-value=1.5 Score=40.72 Aligned_cols=48 Identities=17% Similarity=0.023 Sum_probs=36.3
Q ss_pred eEEEeCCHHHHHHHHhhhc-CcceeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYA-PEHLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~A-PEHL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|++||++++|..- +--..|.++|.. .+..+++ +|.+++...+
T Consensus 359 ~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~~~-~G~v~iN~~~ 410 (446)
T cd07106 359 PVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLE-AGTVWINTHG 410 (446)
T ss_pred EEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCC-ccEEEECCCC
Confidence 4556889999999999842 234688888874 5666664 8999999765
No 15
>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.
Probab=90.79 E-value=1.6 Score=40.46 Aligned_cols=67 Identities=12% Similarity=-0.016 Sum_probs=44.0
Q ss_pred eEEEeCCHHHHHHHHhhhcC-cceeecccChH---HHHhccchhcccccCCCCccc--------------cccccCCccc
Q 046320 95 FMVFAREIMRAITFSNLYAP-EHLIVSAKDTE---KWESIIENAGSMLFGEWTPES--------------ARMYGGVSLD 156 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~AP-EHL~l~~~d~~---~~l~~I~nAGsiFlG~~tp~a--------------AR~~sgLsv~ 156 (198)
.++-++|++||++++|..-- -=..+.++|.. +++++++ +|.++++..++.. .|+.|.-+++
T Consensus 364 ~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~a~~~~~~~~-~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~ 442 (452)
T cd07147 364 TVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELE-VGGVVINDVPTFRVDHMPYGGVKDSGIGREGVRYAIE 442 (452)
T ss_pred EEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHcC-cceEEECCCCCCCCCCCCcCCccccccCCCChHHHHH
Confidence 34557899999999997411 12677787864 5666665 9999999754321 4444444566
Q ss_pred cccccc
Q 046320 157 SFLKYV 162 (198)
Q Consensus 157 ~FlK~~ 162 (198)
.|.+..
T Consensus 443 ~~~~~k 448 (452)
T cd07147 443 EMTEPR 448 (452)
T ss_pred Hhccee
Confidence 666543
No 16
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=90.73 E-value=1.5 Score=40.51 Aligned_cols=47 Identities=17% Similarity=0.178 Sum_probs=35.1
Q ss_pred eEEEeCCHHHHHHHHhhhcCcc--eeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPEH--LIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEH--L~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|.+|+++++|.. |-. ..|.++|+. ++..+++ +|.+++...+
T Consensus 363 ~v~~~~~~~eai~~~n~~-~~gL~a~v~t~d~~~~~~~~~~l~-~G~v~iN~~~ 414 (451)
T cd07150 363 SVIPAKDAEEALELANDT-EYGLSAAILTNDLQRAFKLAERLE-SGMVHINDPT 414 (451)
T ss_pred EEEEeCCHHHHHHHHhCC-CCCCeEEEEeCCHHHHHHHHHhcC-cCEEEECCCC
Confidence 456688999999999986 333 367788874 4566665 8999998664
No 17
>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like. NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.
Probab=90.69 E-value=1.4 Score=41.22 Aligned_cols=48 Identities=19% Similarity=0.129 Sum_probs=36.4
Q ss_pred eEEEeCCHHHHHHHHhhhcCc--ceeecccChH---HHHhccchhcccccCCCCc
Q 046320 95 FMVFAREIMRAITFSNLYAPE--HLIVSAKDTE---KWESIIENAGSMLFGEWTP 144 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APE--HL~l~~~d~~---~~l~~I~nAGsiFlG~~tp 144 (198)
.++.++|.+||++++|.. +- ...|.++|.. .+.+++ .+|.+++..++.
T Consensus 375 ~v~~~~~~~eai~~~n~~-~~gL~a~v~t~d~~~a~~~~~~l-~~G~v~iN~~~~ 427 (465)
T cd07151 375 PIIKADDEEEALELANDT-EYGLSGAVFTSDLERGVQFARRI-DAGMTHINDQPV 427 (465)
T ss_pred EEEeeCCHHHHHHHHhCC-CccceEEEECCCHHHHHHHHHhC-CcCeEEECCCCC
Confidence 466688999999999986 33 3578888874 466667 689999997643
No 18
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=90.57 E-value=1.6 Score=40.44 Aligned_cols=50 Identities=14% Similarity=0.083 Sum_probs=35.9
Q ss_pred eEEEeCCHHHHHHHHhhhcCcc--eeecccCh---HHHHhccchhcccccCCCCccc
Q 046320 95 FMVFAREIMRAITFSNLYAPEH--LIVSAKDT---EKWESIIENAGSMLFGEWTPES 146 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEH--L~l~~~d~---~~~l~~I~nAGsiFlG~~tp~a 146 (198)
.++.++|++||++++|.. +-. ..+.++|. ..+++++ ++|.+++...++..
T Consensus 363 ~v~~~~~~deai~~~n~~-~~gL~~~vft~d~~~~~~~~~~l-~~g~v~iN~~~~~~ 417 (450)
T cd07092 363 TVQPFDDEDEAIELANDV-EYGLASSVWTRDVGRAMRLSARL-DFGTVWVNTHIPLA 417 (450)
T ss_pred EEEEECCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHhc-CccEEEECCCCCCC
Confidence 455678999999999985 443 45666666 3566666 49999999765543
No 19
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=90.39 E-value=1.4 Score=40.90 Aligned_cols=66 Identities=15% Similarity=0.060 Sum_probs=44.2
Q ss_pred eEEEeCCHHHHHHHHhhhcCcce--eecccChH---HHHhccchhcccccCCCCccc--------------cccccCCcc
Q 046320 95 FMVFAREIMRAITFSNLYAPEHL--IVSAKDTE---KWESIIENAGSMLFGEWTPES--------------ARMYGGVSL 155 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEHL--~l~~~d~~---~~l~~I~nAGsiFlG~~tp~a--------------AR~~sgLsv 155 (198)
.++.++|++||++++|.. +-.| .|.++|.. .+.+++ .+|.++++..+... .|+.|..++
T Consensus 368 ~v~~~~~~~eai~~~n~~-~~gL~~~v~t~d~~~~~~~~~~~-~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l 445 (456)
T cd07145 368 PIAKVKDDEEAVEIANST-EYGLQASVFTNDINRALKVAREL-EAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRYTM 445 (456)
T ss_pred EEEEECCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHhC-CcceEEECCCCCCCCCCCCCCCcccccCCcCchHHHH
Confidence 466688999999999985 4444 67777874 344455 68999999654221 555555556
Q ss_pred ccccccc
Q 046320 156 DSFLKYV 162 (198)
Q Consensus 156 ~~FlK~~ 162 (198)
..|++..
T Consensus 446 ~~f~~~k 452 (456)
T cd07145 446 LEMTEEK 452 (456)
T ss_pred HHhhcee
Confidence 6666543
No 20
>cd07099 ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.
Probab=89.97 E-value=1.5 Score=40.54 Aligned_cols=47 Identities=17% Similarity=0.085 Sum_probs=35.9
Q ss_pred eEEEeCCHHHHHHHHhhhcCcc--eeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPEH--LIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEH--L~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|.+||++++|.. +-. ..|.++|.. .+.++++ +|.++++..+
T Consensus 364 ~v~~~~~~~eai~~~n~~-~~gL~~~i~t~d~~~~~~~~~~l~-~G~v~iN~~~ 415 (453)
T cd07099 364 PVMPVADEDEAIALANDS-RYGLSASVFSRDLARAEAIARRLE-AGAVSINDVL 415 (453)
T ss_pred EEEeeCCHHHHHHHHhCC-CCCCeEEEEcCCHHHHHHHHHhCC-eeeEEECCCC
Confidence 455578999999999984 333 577788874 5778887 8999999763
No 21
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=89.11 E-value=2.5 Score=39.06 Aligned_cols=47 Identities=17% Similarity=0.046 Sum_probs=35.6
Q ss_pred eEEEeCCHHHHHHHHhhhcCcc--eeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPEH--LIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEH--L~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|.+||++++|.. +-. ..|.++|.. .+..+++ +|.+++...+
T Consensus 364 ~v~~~~~~~eai~~~n~~-~~gl~~~i~t~d~~~~~~~~~~l~-~g~v~vN~~~ 415 (451)
T cd07103 364 PIIPFDTEDEVIARANDT-PYGLAAYVFTRDLARAWRVAEALE-AGMVGINTGL 415 (451)
T ss_pred EEEEECCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHhCC-cceEEECCCC
Confidence 466688999999999986 333 567777754 5666775 9999999876
No 22
>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like. Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).
Probab=88.58 E-value=3 Score=38.82 Aligned_cols=47 Identities=17% Similarity=0.076 Sum_probs=35.5
Q ss_pred eEEEeCCHHHHHHHHhhhcCc--ceeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPE--HLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APE--HL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|.+||++++|.. |- -..|.++|.. .+.++++ +|.|++....
T Consensus 364 ~v~~~~~~~eai~~~n~~-~~gL~~~i~t~d~~~a~~~~~~l~-~G~v~iN~~~ 415 (454)
T cd07101 364 SIYRVADDDEAIELANDT-DYGLNASVWTRDGARGRRIAARLR-AGTVNVNEGY 415 (454)
T ss_pred EEEeeCCHHHHHHHHhCC-CCCceEEEEcCCHHHHHHHHHhcC-cceEEECCCC
Confidence 456688999999999975 33 4567888864 5666774 8999999753
No 23
>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional
Probab=88.02 E-value=4.4 Score=37.69 Aligned_cols=49 Identities=12% Similarity=0.169 Sum_probs=36.8
Q ss_pred eEEEeCCHHHHHHHHhhhc-CcceeecccChH---HHHhccchhcccccCCCCc
Q 046320 95 FMVFAREIMRAITFSNLYA-PEHLIVSAKDTE---KWESIIENAGSMLFGEWTP 144 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~A-PEHL~l~~~d~~---~~l~~I~nAGsiFlG~~tp 144 (198)
.++.++|.+||++++|..- +--..+.++|.. .+.+++ .+|.+++...+.
T Consensus 319 ~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~~~~l-~~G~v~VN~~~~ 371 (417)
T PRK00197 319 AVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEV-DSAAVYVNASTR 371 (417)
T ss_pred EEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhC-CeeEEEEeCCCc
Confidence 3556899999999999863 334788999974 445555 489999997654
No 24
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=87.95 E-value=2.9 Score=38.96 Aligned_cols=49 Identities=12% Similarity=0.024 Sum_probs=36.2
Q ss_pred eEEEeCCHHHHHHHHhhhcCcc--eeecccChH---HHHhccchhcccccCCCCcc
Q 046320 95 FMVFAREIMRAITFSNLYAPEH--LIVSAKDTE---KWESIIENAGSMLFGEWTPE 145 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEH--L~l~~~d~~---~~l~~I~nAGsiFlG~~tp~ 145 (198)
.++.++|++||++++|.. |-. ..+.++|+. .+++++ .+|.|+++..+..
T Consensus 381 ~v~~~~~~~eai~~~n~~-~~gL~~~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~~ 434 (468)
T cd07088 381 PVVKFSSLDEAIELANDS-EYGLTSYIYTENLNTAMRATNEL-EFGETYINRENFE 434 (468)
T ss_pred EEEecCCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHhC-CcceEEECCCCCC
Confidence 466688999999999985 333 477788864 466666 4799999976643
No 25
>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like. 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.
Probab=87.91 E-value=3.6 Score=38.24 Aligned_cols=48 Identities=15% Similarity=0.132 Sum_probs=35.4
Q ss_pred eEEEeCCHHHHHHHHhhhcC-cceeecccCh---HHHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAP-EHLIVSAKDT---EKWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~AP-EHL~l~~~d~---~~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|.+||++++|..-- --..|.++|. .+++.++ .+|.|++....
T Consensus 364 ~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~~~~~~~l-~~G~v~iN~~~ 415 (453)
T cd07115 364 SVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAAL-KAGTVWINTYN 415 (453)
T ss_pred EEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhc-CccEEEECCCC
Confidence 46668899999999998532 2366777775 4566777 67999998643
No 26
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=87.90 E-value=2.9 Score=38.71 Aligned_cols=46 Identities=17% Similarity=0.170 Sum_probs=34.3
Q ss_pred EEEeCCHHHHHHHHhhhcCc--ceeecccChH---HHHhccchhcccccCCCC
Q 046320 96 MVFAREIMRAITFSNLYAPE--HLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 96 iv~v~~l~eai~~~N~~APE--HL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
++.++|.+||++++|.. +- -..|.++|+. .+.++++ +|.|++...+
T Consensus 366 v~~~~~~~eai~~~n~~-~~gL~~~i~t~d~~~~~~~~~~l~-~G~v~iN~~~ 416 (452)
T cd07102 366 IMKVKSDAEAIALMNDS-EYGLTASVWTKDIARAEALGEQLE-TGTVFMNRCD 416 (452)
T ss_pred EEEeCCHHHHHHHHhCC-CCCceEEEEcCCHHHHHHHHHHcC-cceEEECCCC
Confidence 45578999999999973 22 3578888884 4666774 8999999754
No 27
>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins. ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.
Probab=87.72 E-value=3.4 Score=38.32 Aligned_cols=48 Identities=13% Similarity=0.147 Sum_probs=35.8
Q ss_pred eEEEeCCHHHHHHHHhhhcCc--ceeecccChH---HHHhccchhcccccCCCCc
Q 046320 95 FMVFAREIMRAITFSNLYAPE--HLIVSAKDTE---KWESIIENAGSMLFGEWTP 144 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APE--HL~l~~~d~~---~~l~~I~nAGsiFlG~~tp 144 (198)
.++.++|++||++++|.. |. -..|.++|+. ++.+++ .+|.|++..++.
T Consensus 365 ~v~~~~~~~eai~~~n~~-~~gL~~~i~t~d~~~a~~~~~~l-~~g~v~iN~~~~ 417 (453)
T cd07094 365 PIIRYDDFEEAIRIANST-DYGLQAGIFTRDLNVAFKAAEKL-EVGGVMVNDSSA 417 (453)
T ss_pred EEEEeCCHHHHHHHHhCC-CCCCeeEEECCCHHHHHHHHHhc-CcCeEEEcCCCC
Confidence 455688999999999975 33 3567888874 556666 479999997643
No 28
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=87.31 E-value=3.4 Score=38.87 Aligned_cols=48 Identities=13% Similarity=0.084 Sum_probs=36.3
Q ss_pred eEEEeCCHHHHHHHHhhh-cCcceeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLY-APEHLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~-APEHL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|++||++++|.- .+=...+.++|.. .++++++ +|.+++..+.
T Consensus 389 ~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~-~G~v~iN~~~ 440 (476)
T cd07142 389 SILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALK-AGTVWVNCYD 440 (476)
T ss_pred EEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCC-cceEEECCCC
Confidence 466689999999999974 1224678888874 5777885 8999999643
No 29
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=87.27 E-value=2.9 Score=38.94 Aligned_cols=48 Identities=15% Similarity=0.131 Sum_probs=36.0
Q ss_pred eEEEeCCHHHHHHHHhhhcCcc--eeecccCh---HHHHhccchhcccccCCCCc
Q 046320 95 FMVFAREIMRAITFSNLYAPEH--LIVSAKDT---EKWESIIENAGSMLFGEWTP 144 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEH--L~l~~~d~---~~~l~~I~nAGsiFlG~~tp 144 (198)
.++.++|.+||++++|.. +.. ..|.++|+ .+++.++ .+|.|++.....
T Consensus 370 ~v~~~~~~deai~~~n~~-~~gL~~~ift~d~~~~~~~~~~l-~~g~v~iN~~~~ 422 (457)
T cd07114 370 SVIPFDDEEEAIALANDS-EYGLAAGIWTRDLARAHRVARAI-EAGTVWVNTYRA 422 (457)
T ss_pred EEeccCCHHHHHHHhhCC-CcCceeEEECCCHHHHHHHHHhc-CcceEEECCCCC
Confidence 455678999999999986 443 46777777 4577777 589999997543
No 30
>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins. ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.
Probab=87.23 E-value=0.51 Score=43.68 Aligned_cols=68 Identities=19% Similarity=0.280 Sum_probs=46.6
Q ss_pred eEEEeCCHHHHHHHHhhhcCccee--ecccChH---HHHhccchhcccccCCCC-----ccc----------cccccCCc
Q 046320 95 FMVFAREIMRAITFSNLYAPEHLI--VSAKDTE---KWESIIENAGSMLFGEWT-----PES----------ARMYGGVS 154 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEHL~--l~~~d~~---~~l~~I~nAGsiFlG~~t-----p~a----------AR~~sgLs 154 (198)
.++.++|++|+++++|.. +..|. +.++|+. .+..+++ +|.||+...+ |.. .|..|.-+
T Consensus 337 ~v~~~~~~~eai~~~n~~-~~gL~~~v~t~d~~~~~~~~~~l~-~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~ 414 (426)
T cd07087 337 PILTYDDLDEAIEFINSR-PKPLALYLFSEDKAVQERVLAETS-SGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAG 414 (426)
T ss_pred EEEEeCCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHhcCC-cccEEECCcccccCCCCCCCCCCCcccCCCccCHHH
Confidence 567789999999999983 55554 7788875 4555564 8999999753 111 55555555
Q ss_pred cccccccchH
Q 046320 155 LDSFLKYVTV 164 (198)
Q Consensus 155 v~~FlK~~s~ 164 (198)
++.|.+..++
T Consensus 415 l~~~~~~k~~ 424 (426)
T cd07087 415 FDTFSHLKSV 424 (426)
T ss_pred HHHhccceee
Confidence 6667665544
No 31
>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like. Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.
Probab=87.13 E-value=3.8 Score=38.32 Aligned_cols=48 Identities=19% Similarity=0.192 Sum_probs=36.0
Q ss_pred eEEEeCCHHHHHHHHhhhc-CcceeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYA-PEHLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~A-PEHL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|++||++++|..- .--..|.++|+. +++++++ +|.||++.++
T Consensus 362 ~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~-~G~v~iN~~~ 413 (451)
T cd07146 362 PVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLD-VGTVNVNEVP 413 (451)
T ss_pred EEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHCC-cceEEECCCC
Confidence 4566899999999999632 223578888874 5777884 9999999753
No 32
>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=86.32 E-value=4.3 Score=37.94 Aligned_cols=48 Identities=19% Similarity=0.162 Sum_probs=35.7
Q ss_pred eEEEeCCHHHHHHHHhhh-cCcceeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLY-APEHLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~-APEHL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|++||++++|.. .+-=..|.++|+. +++++++ +|.++++..+
T Consensus 367 ~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~~~-~g~v~iN~~~ 418 (455)
T cd07148 367 CVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLD-ATAVMVNDHT 418 (455)
T ss_pred EEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcC-cCeEEECCCC
Confidence 355578999999999974 2334678888874 4666665 7899999754
No 33
>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like. NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.
Probab=86.14 E-value=4.3 Score=38.24 Aligned_cols=50 Identities=16% Similarity=0.140 Sum_probs=37.1
Q ss_pred eEEEeCCHHHHHHHHhhhc-CcceeecccChH---HHHhccchhcccccCCCCcc
Q 046320 95 FMVFAREIMRAITFSNLYA-PEHLIVSAKDTE---KWESIIENAGSMLFGEWTPE 145 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~A-PEHL~l~~~d~~---~~l~~I~nAGsiFlG~~tp~ 145 (198)
.++.++|++||++++|..- +-...+.++|.. .+.+++ .+|.+++......
T Consensus 393 ~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l-~~G~v~iN~~~~~ 446 (481)
T cd07141 393 QIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNAL-RAGTVWVNCYNVV 446 (481)
T ss_pred EEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhc-CcCeEEECCCCCC
Confidence 4666889999999999742 334678888874 466677 4899999975433
No 34
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=85.51 E-value=5.5 Score=36.90 Aligned_cols=48 Identities=21% Similarity=0.188 Sum_probs=35.7
Q ss_pred eEEEeCCHHHHHHHHhhhcCc--ceeecccChH---HHHhccchhcccccCCCCc
Q 046320 95 FMVFAREIMRAITFSNLYAPE--HLIVSAKDTE---KWESIIENAGSMLFGEWTP 144 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APE--HL~l~~~d~~---~~l~~I~nAGsiFlG~~tp 144 (198)
.++.++|.+||++++|.. +. -..+.++|.. .+..+++ +|.+++..++.
T Consensus 342 ~v~~~~~~~eai~~~n~~-~~gl~a~v~t~d~~~~~~~~~~l~-~g~v~iN~~~~ 394 (429)
T cd07100 342 AVIKVKDEEEAIALANDS-PFGLGGSVFTTDLERAERVARRLE-AGMVFINGMVK 394 (429)
T ss_pred EEeeeCCHHHHHHHHhCC-CcCceEEEECCCHHHHHHHHHhCC-cCeEEECCCCC
Confidence 455678999999999984 33 3578888874 4556664 89999997664
No 35
>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like. NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.
Probab=85.29 E-value=5.8 Score=36.78 Aligned_cols=48 Identities=10% Similarity=0.049 Sum_probs=35.4
Q ss_pred eEEEeCCHHHHHHHHhhhc-CcceeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYA-PEHLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~A-PEHL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++-++|.+||++++|..- +=-..|.++|+. .+.++++ +|.+++...+
T Consensus 354 ~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~-~G~v~iN~~~ 405 (443)
T cd07152 354 PVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLR-TGMLHINDQT 405 (443)
T ss_pred EEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCC-cCeEEECCCC
Confidence 3555789999999999753 224678888874 4556665 9999999754
No 36
>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=85.21 E-value=5.5 Score=37.89 Aligned_cols=48 Identities=10% Similarity=0.071 Sum_probs=35.2
Q ss_pred eEEEeCCHHHHHHHHhhhc-CcceeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYA-PEHLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~A-PEHL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|.+||++++|..- +--..|.++|.. .+.+++ .+|.+++...+
T Consensus 398 ~v~~~~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l-~~G~v~vN~~~ 449 (496)
T PLN00412 398 PVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAM-ETGTVQINSAP 449 (496)
T ss_pred EEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhC-CcceEEEcCCC
Confidence 3566889999999999851 223678888874 455565 58999999764
No 37
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=85.11 E-value=6.1 Score=37.20 Aligned_cols=48 Identities=13% Similarity=0.212 Sum_probs=35.4
Q ss_pred eEEEeCCHHHHHHHHhhh-cCcceeecccCh---HHHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLY-APEHLIVSAKDT---EKWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~-APEHL~l~~~d~---~~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|.+||++++|.- .+--..|.++|. .++.++++ +|.+++..++
T Consensus 372 ~v~~~~d~~eai~~~n~~~~gLs~~v~t~d~~~a~~~~~~l~-~G~v~iN~~~ 423 (462)
T PRK13968 372 AITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLE-CGGVFINGYC 423 (462)
T ss_pred EEEEECCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhCC-cceEEECCCC
Confidence 456688999999999973 122357888886 45667776 8999999754
No 38
>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]
Probab=84.97 E-value=0.59 Score=44.52 Aligned_cols=48 Identities=15% Similarity=0.129 Sum_probs=38.3
Q ss_pred eEEEeCCHHHHHHHHhhhcCc--ceeecccChHHHHhcc--chhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPE--HLIVSAKDTEKWESII--ENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APE--HL~l~~~d~~~~l~~I--~nAGsiFlG~~t 143 (198)
.++-++|+|||++++|. .|= -..+.++|......-. -.+|.|++..+.
T Consensus 378 ~v~~~~~~dEAi~lAN~-t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~ 429 (472)
T COG1012 378 PVIRFKDEEEAIELAND-TEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYT 429 (472)
T ss_pred EEEEeCCHHHHHHHHhC-CCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCC
Confidence 46668899999999999 663 4588899987666533 579999999874
No 39
>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins. Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.
Probab=84.81 E-value=0.84 Score=42.66 Aligned_cols=46 Identities=13% Similarity=0.151 Sum_probs=35.0
Q ss_pred eEEEeCCHHHHHHHHhhhcCccee--ecccChH---HHHhccchhcccccCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPEHLI--VSAKDTE---KWESIIENAGSMLFGEW 142 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEHL~--l~~~d~~---~~l~~I~nAGsiFlG~~ 142 (198)
.++.++|++||++++|.. +-.|. |.++|+. .+.++++ +|.||++..
T Consensus 347 ~v~~~~~~deai~~an~~-~~gL~~~v~t~d~~~a~~~~~~l~-~g~v~iN~~ 397 (436)
T cd07135 347 PIIKVDDLDEAIKVINSR-DTPLALYIFTDDKSEIDHILTRTR-SGGVVINDT 397 (436)
T ss_pred EEEecCCHHHHHHHHhCC-CCCceEEEEcCCHHHHHHHHhcCC-cCeEEECCc
Confidence 466689999999999985 33444 7888885 5566664 799999964
No 40
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=84.53 E-value=0.6 Score=43.81 Aligned_cols=47 Identities=21% Similarity=0.215 Sum_probs=36.1
Q ss_pred eEEEeCCHHHHHHHHhhhcCcce--eecccCh---HHHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPEHL--IVSAKDT---EKWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEHL--~l~~~d~---~~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|++||++++|.. |-.| .|.++|. +.+.++++ +|.+++..+.
T Consensus 385 ~v~~~~~~deai~~~n~~-~~gL~~~v~t~d~~~~~~~~~~l~-~G~v~iN~~~ 436 (482)
T cd07119 385 TVERFDTEEEAIRLANDT-PYGLAGAVWTKDIARANRVARRLR-AGTVWINDYH 436 (482)
T ss_pred EEeccCCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHhcC-cceEEECCCC
Confidence 456688999999999986 4444 6777776 45667776 8999999753
No 41
>TIGR01780 SSADH succinate-semialdehyde dehydrogenase. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).
Probab=84.51 E-value=5.9 Score=36.90 Aligned_cols=48 Identities=10% Similarity=-0.043 Sum_probs=35.2
Q ss_pred eEEEeCCHHHHHHHHhhhcCcc--eeecccChH---HHHhccchhcccccCCCCc
Q 046320 95 FMVFAREIMRAITFSNLYAPEH--LIVSAKDTE---KWESIIENAGSMLFGEWTP 144 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEH--L~l~~~d~~---~~l~~I~nAGsiFlG~~tp 144 (198)
.|+.++|.+|+++++|.- |-- ..+.++|.. .+.++++ +|.+++.....
T Consensus 365 ~v~~~~~~~eai~~an~~-~~gL~~~vfs~d~~~~~~~~~~l~-~G~v~iN~~~~ 417 (448)
T TIGR01780 365 PVFKFDDEEEVIAIANDT-EVGLAAYFFSRDLATIWRVAEALE-YGMVGINTGLI 417 (448)
T ss_pred EEEEECCHHHHHHHHhCC-CcCceEEEECCCHHHHHHHHHhCC-ccEEEECCCCC
Confidence 466689999999999974 322 467777764 5666775 79999997543
No 42
>PLN02766 coniferyl-aldehyde dehydrogenase
Probab=84.28 E-value=6.4 Score=37.57 Aligned_cols=48 Identities=17% Similarity=0.112 Sum_probs=35.9
Q ss_pred eEEEeCCHHHHHHHHhhhc-CcceeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYA-PEHLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~A-PEHL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|++||++++|.-- +=-..+.++|.. .+.++++ +|.|++..+.
T Consensus 406 ~v~~~~~~deai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~-~G~v~iN~~~ 457 (501)
T PLN02766 406 SLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIR-AGTIWVNCYF 457 (501)
T ss_pred EEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCC-cceEEECCCC
Confidence 4666899999999999731 224678888874 4666774 8999998644
No 43
>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.
Probab=83.94 E-value=7.1 Score=36.80 Aligned_cols=48 Identities=19% Similarity=0.092 Sum_probs=34.9
Q ss_pred eEEEeCCHHHHHHHHhhhcCc-ceeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPE-HLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APE-HL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|.+||++++|.---= -..+.++|.. .+.+++ ++|.|+++..+
T Consensus 381 ~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l-~~G~v~iN~~~ 432 (472)
T TIGR03250 381 PVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAEL-QVGTVNVWEVP 432 (472)
T ss_pred EEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHHC-CcceEEEcCCC
Confidence 355578999999999975221 2577888875 455666 59999998653
No 44
>TIGR00407 proA gamma-glutamyl phosphate reductase. The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.
Probab=82.76 E-value=2.2 Score=39.77 Aligned_cols=58 Identities=10% Similarity=0.127 Sum_probs=43.6
Q ss_pred eEEEeCCHHHHHHHHhhhcCc--ceeecccChH---HHHhccchhcccccCCCCccccccccCCc
Q 046320 95 FMVFAREIMRAITFSNLYAPE--HLIVSAKDTE---KWESIIENAGSMLFGEWTPESARMYGGVS 154 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APE--HL~l~~~d~~---~~l~~I~nAGsiFlG~~tp~aAR~~sgLs 154 (198)
.++.++|++||++++|.+ +- ...|.++|.. .+.++++ +|.|++...+....++--|++
T Consensus 311 ~v~~~~~~~eAi~~aN~~-~~GL~a~I~t~d~~~a~~~a~~i~-~G~v~iN~~~~~~~~~pfG~~ 373 (398)
T TIGR00407 311 SVKIVESLEAAIQHINQY-GTQHSDAILTENKANAEQFQNGVD-SAAVYHNASTRFTDGFRFGFG 373 (398)
T ss_pred EEEEECCHHHHHHHHHHh-CCCCceEEEeCCHHHHHHHHHhCC-eeEEEEeCCCCcCCCcccccc
Confidence 456689999999999997 43 5789999964 5666666 899999987766655444454
No 45
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=82.58 E-value=8.2 Score=36.71 Aligned_cols=66 Identities=12% Similarity=0.043 Sum_probs=43.0
Q ss_pred eEEEeCCHHHHHHHHhhhcCc--ceeecccChH---HHHhccchhcccccCCCCccc-------------cccccCCccc
Q 046320 95 FMVFAREIMRAITFSNLYAPE--HLIVSAKDTE---KWESIIENAGSMLFGEWTPES-------------ARMYGGVSLD 156 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APE--HL~l~~~d~~---~~l~~I~nAGsiFlG~~tp~a-------------AR~~sgLsv~ 156 (198)
.|+-++|++||++++|.- |- =..+.++|.. .+.++++ +|.+++..+.... .|+.|.-+++
T Consensus 393 ~v~~~~~~~eai~~aN~s-~~GL~a~Vft~d~~~a~~~~~~l~-~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~ 470 (482)
T PRK11241 393 PLFRFKDEADVIAQANDT-EFGLAAYFYARDLSRVFRVGEALE-YGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIE 470 (482)
T ss_pred EEEEeCCHHHHHHHhhCC-CCCceEEEEcCCHHHHHHHHHHcC-ccEEEECCCCCCCCCCCcCCccccccCcccHHHHHH
Confidence 466688999999999975 22 2567777764 4555555 7999999754332 4444444555
Q ss_pred cccccc
Q 046320 157 SFLKYV 162 (198)
Q Consensus 157 ~FlK~~ 162 (198)
+|++..
T Consensus 471 ~ft~~k 476 (482)
T PRK11241 471 DYLEIK 476 (482)
T ss_pred Hhhcce
Confidence 666543
No 46
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=82.35 E-value=0.99 Score=41.97 Aligned_cols=48 Identities=13% Similarity=0.027 Sum_probs=35.5
Q ss_pred eEEEeCCHHHHHHHHhhhcC-cceeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAP-EHLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~AP-EHL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|.+||++++|..-- --..|.++|+. +++++++ +|.+++....
T Consensus 367 ~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~-~G~v~iN~~~ 418 (457)
T cd07090 367 SILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQ-AGTCWINTYN 418 (457)
T ss_pred EEEEECCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHhCC-cCeEEECCCC
Confidence 45668999999999998632 23567777764 5667775 7999999753
No 47
>PLN02278 succinic semialdehyde dehydrogenase
Probab=81.76 E-value=8.2 Score=36.76 Aligned_cols=48 Identities=13% Similarity=0.019 Sum_probs=33.8
Q ss_pred eEEEeCCHHHHHHHHhhhc-CcceeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYA-PEHLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~A-PEHL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|++||++++|.-- +=-..+.++|.. ++.+++ ++|.|++....
T Consensus 407 ~v~~~~~~deai~~~N~~~~gL~a~vft~d~~~~~~~~~~l-~~G~v~iN~~~ 458 (498)
T PLN02278 407 PLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEAL-EYGIVGVNEGL 458 (498)
T ss_pred EEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhC-CcCeEEECCCC
Confidence 3556889999999999742 123567777774 556666 45999999743
No 48
>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19. Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).
Probab=81.61 E-value=13 Score=34.56 Aligned_cols=48 Identities=13% Similarity=0.161 Sum_probs=35.2
Q ss_pred eEEEeCCHHHHHHHHhhhc-CcceeecccChHH---HHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYA-PEHLIVSAKDTEK---WESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~A-PEHL~l~~~d~~~---~l~~I~nAGsiFlG~~t 143 (198)
.++-++|++||++++|.-- +--..|.+.|... +.+++ ++|.+++...+
T Consensus 313 ~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~-~~G~v~iN~~~ 364 (406)
T cd07079 313 AVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFLREV-DSAAVYVNAST 364 (406)
T ss_pred EEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHHHhC-CeeEEEEeCCC
Confidence 4666899999999999752 2336788888754 44455 58999998754
No 49
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=80.88 E-value=1.3 Score=40.39 Aligned_cols=68 Identities=18% Similarity=0.174 Sum_probs=45.4
Q ss_pred eEEEeCCHHHHHHHHhhhcC-cceeecccChH---HHHhccchhcccccCCCCcc-c-------------cccccCCccc
Q 046320 95 FMVFAREIMRAITFSNLYAP-EHLIVSAKDTE---KWESIIENAGSMLFGEWTPE-S-------------ARMYGGVSLD 156 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~AP-EHL~l~~~d~~---~~l~~I~nAGsiFlG~~tp~-a-------------AR~~sgLsv~ 156 (198)
.++.++|++|+++++|..-- --..|.++|+. .++.++ ++|.++++..+.. . .|+.|..++.
T Consensus 344 ~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~-~~g~v~iN~~~~~~~~~~pfgG~~~sg~g~~~g~~~~~ 422 (432)
T cd07078 344 PVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERL-EAGTVWINDYSVGAEPSAPFGGVKQSGIGREGGPYGLE 422 (432)
T ss_pred EEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhc-CcceEEECCCCCCCCCCCCcCCcCcCcCCccchHHHHH
Confidence 46668899999999998532 23678888874 345554 6899999976655 2 4444455555
Q ss_pred cccccch
Q 046320 157 SFLKYVT 163 (198)
Q Consensus 157 ~FlK~~s 163 (198)
.|++..+
T Consensus 423 ~~~~~k~ 429 (432)
T cd07078 423 EYTEPKT 429 (432)
T ss_pred HhhceEE
Confidence 6655443
No 50
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=80.87 E-value=1.1 Score=42.04 Aligned_cols=47 Identities=17% Similarity=0.072 Sum_probs=35.1
Q ss_pred eEEEeCCHHHHHHHHhhhcCcce--eecccChHH---HHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPEHL--IVSAKDTEK---WESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEHL--~l~~~d~~~---~l~~I~nAGsiFlG~~t 143 (198)
.++.++|++||++++|. .|..| .|.++|... +..++ .+|.++++..+
T Consensus 372 ~v~~~~~~deai~~~n~-~~~gL~~~v~t~d~~~~~~~~~~~-~~G~v~iN~~~ 423 (459)
T cd07089 372 VVIPYDDDDEAVRIAND-SDYGLSGGVWSADVDRAYRVARRI-RTGSVGINGGG 423 (459)
T ss_pred EEeccCCHHHHHHHHhC-CCCCCeEEEEcCCHHHHHHHHHhc-CcCeEEECCCC
Confidence 46668899999999998 34444 778888754 55555 57999999755
No 51
>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins. Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.
Probab=80.79 E-value=1.6 Score=40.68 Aligned_cols=68 Identities=19% Similarity=0.205 Sum_probs=46.6
Q ss_pred eEEEeCCHHHHHHHHhhhc-CcceeecccChHH---HHhccchhcccccCCCCc-----cc----------cccccCCcc
Q 046320 95 FMVFAREIMRAITFSNLYA-PEHLIVSAKDTEK---WESIIENAGSMLFGEWTP-----ES----------ARMYGGVSL 155 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~A-PEHL~l~~~d~~~---~l~~I~nAGsiFlG~~tp-----~a----------AR~~sgLsv 155 (198)
.++.++|++||++++|..- .=-..|.++|... ++++++ +|.|++...+. .. .|+.|..++
T Consensus 343 ~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~-~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l 421 (432)
T cd07137 343 PIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETS-SGGVTFNDTVVQYAIDTLPFGGVGESGFGAYHGKFSF 421 (432)
T ss_pred EEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCC-cCcEEECCccccccCCCCCCCCcCcCcCCccccHHHH
Confidence 5667899999999999862 1235788888754 666666 79999996432 11 555555666
Q ss_pred ccccccch
Q 046320 156 DSFLKYVT 163 (198)
Q Consensus 156 ~~FlK~~s 163 (198)
+.|++..+
T Consensus 422 ~~f~~~k~ 429 (432)
T cd07137 422 DAFSHKKA 429 (432)
T ss_pred HHhccCce
Confidence 66776544
No 52
>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.
Probab=80.71 E-value=1.4 Score=41.15 Aligned_cols=68 Identities=15% Similarity=0.130 Sum_probs=47.3
Q ss_pred eEEEeCCHHHHHHHHhhhcCccee--ecccChHH---HHhccchhcccccCCCC-----ccc----------cccccCCc
Q 046320 95 FMVFAREIMRAITFSNLYAPEHLI--VSAKDTEK---WESIIENAGSMLFGEWT-----PES----------ARMYGGVS 154 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEHL~--l~~~d~~~---~l~~I~nAGsiFlG~~t-----p~a----------AR~~sgLs 154 (198)
.++.++|.+||++++|.. |-.|. +.++|... +.++++ +|.++++..+ |.. .|+.|.-+
T Consensus 345 ~v~~~~~~~eai~~~n~~-~~gL~~~v~t~d~~~a~~~~~~l~-~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~ 422 (434)
T cd07133 345 PILTYDSLDEAIDYINAR-PRPLALYYFGEDKAEQDRVLRRTH-SGGVTINDTLLHVAQDDLPFGGVGASGMGAYHGKEG 422 (434)
T ss_pred EEEEeCCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHhCC-cceEEECCcccccCCCCCCcCCCCcccCCCcCCHHH
Confidence 466689999999999975 33454 88888754 555555 7999999754 211 56666666
Q ss_pred cccccccchH
Q 046320 155 LDSFLKYVTV 164 (198)
Q Consensus 155 v~~FlK~~s~ 164 (198)
++.|++..++
T Consensus 423 ~~~ft~~k~v 432 (434)
T cd07133 423 FLTFSHAKPV 432 (434)
T ss_pred HHHhccccee
Confidence 7777776554
No 53
>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like. Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.
Probab=80.25 E-value=8.5 Score=36.52 Aligned_cols=48 Identities=13% Similarity=0.070 Sum_probs=34.1
Q ss_pred eEEEeCCHHHHHHHHhhhc-CcceeecccChHH---HHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYA-PEHLIVSAKDTEK---WESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~A-PEHL~l~~~d~~~---~l~~I~nAGsiFlG~~t 143 (198)
.++.++|++||++++|..- +--..|.++|... +..++ .+|.|++..+.
T Consensus 393 ~v~~~~~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l-~aG~v~iN~~~ 444 (480)
T cd07111 393 VVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSL-KAGVVWINGHN 444 (480)
T ss_pred EeecCCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhC-CEeeEEECCCC
Confidence 4556789999999999742 1234778888754 44555 48999998753
No 54
>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.
Probab=80.07 E-value=3 Score=39.08 Aligned_cols=48 Identities=15% Similarity=0.129 Sum_probs=34.7
Q ss_pred eEEEeCCHHHHHHHHhhh--c-CcceeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLY--A-PEHLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~--A-PEHL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|++||++++|.- . +.-..|.++|.. ++.+++ .+|.|++...+
T Consensus 337 ~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a~~l-~aG~v~iN~~~ 390 (429)
T cd07121 337 PVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAM-QTTIFVKNGPS 390 (429)
T ss_pred EEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHHhhC-CceEEEEcCCC
Confidence 355578999999999974 1 224688899864 455566 57999999543
No 55
>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.
Probab=79.94 E-value=2.7 Score=39.71 Aligned_cols=69 Identities=12% Similarity=0.119 Sum_probs=46.5
Q ss_pred eEEEeCCHHHHHHHHhhhcC-----cceeecccChH---HHHhccchhcccccCCCCccc--------------------
Q 046320 95 FMVFAREIMRAITFSNLYAP-----EHLIVSAKDTE---KWESIIENAGSMLFGEWTPES-------------------- 146 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~AP-----EHL~l~~~d~~---~~l~~I~nAGsiFlG~~tp~a-------------------- 146 (198)
.++.++|.+||++++|...+ -=..|.++|.. .+.+++ .+|.|++...+--+
T Consensus 335 ~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l-~aG~V~IN~~~~~~~~g~~~~~~~~~~~~~~~~~ 413 (436)
T cd07122 335 AFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRM-PVSRILVNTPSSLGGIGDTYNGLAPSLTLGCGSW 413 (436)
T ss_pred EEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhC-CceEEEEeCCccccccCccCCCCCceeeeecccc
Confidence 35558999999999999622 22678888875 444555 48999998655322
Q ss_pred --cccccCCccccccccchH
Q 046320 147 --ARMYGGVSLDSFLKYVTV 164 (198)
Q Consensus 147 --AR~~sgLsv~~FlK~~s~ 164 (198)
--.+.+|+..+|++..++
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~ 433 (436)
T cd07122 414 GGNSTSDNVGPKHLLNIKRV 433 (436)
T ss_pred CCCcCCCCCChHHhheeEee
Confidence 122335777888877664
No 56
>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.
Probab=78.95 E-value=14 Score=35.20 Aligned_cols=48 Identities=13% Similarity=0.078 Sum_probs=34.5
Q ss_pred EEEeC--CHHHHHHHHhhhcCc--ceeecccChH---HHHhccchhcccccCCCCcc
Q 046320 96 MVFAR--EIMRAITFSNLYAPE--HLIVSAKDTE---KWESIIENAGSMLFGEWTPE 145 (198)
Q Consensus 96 iv~v~--~l~eai~~~N~~APE--HL~l~~~d~~---~~l~~I~nAGsiFlG~~tp~ 145 (198)
++.++ |++||++++|.- |- -..+.+.|.. .+.+++ ++|.+++..+...
T Consensus 396 v~~~~~~~~~eai~~aN~~-~~gL~a~vft~d~~~a~~~~~~l-~~G~v~iN~~~~~ 450 (486)
T cd07140 396 ISKFDDGDVDGVLQRANDT-EYGLASGVFTKDINKALYVSDKL-EAGTVFVNTYNKT 450 (486)
T ss_pred EEEcCCCCHHHHHHHHhCC-CcCceEEEECCCHHHHHHHHHhC-CcceEEECCCCCC
Confidence 44455 699999999963 33 3567788874 567777 5999999975443
No 57
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=78.35 E-value=12 Score=35.53 Aligned_cols=48 Identities=13% Similarity=0.090 Sum_probs=35.0
Q ss_pred eEEEeCCHHHHHHHHhhhc-CcceeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYA-PEHLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~A-PEHL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|.+||++++|..- +--..|.++|.. .++.++ .+|.|++..++
T Consensus 392 ~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l-~~G~v~iN~~~ 443 (481)
T cd07143 392 AVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANAL-KAGTVWVNCYN 443 (481)
T ss_pred EEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhc-CcCeEEECCCC
Confidence 4566889999999999631 223578888874 466666 48999999754
No 58
>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like. Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.
Probab=77.96 E-value=1.8 Score=40.39 Aligned_cols=46 Identities=20% Similarity=0.221 Sum_probs=35.4
Q ss_pred eEEEeCCHHHHHHHHhhhcCcc--eeecccChH---HHHhccchhcccccCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPEH--LIVSAKDTE---KWESIIENAGSMLFGEW 142 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEH--L~l~~~d~~---~~l~~I~nAGsiFlG~~ 142 (198)
.++.++|++||++++|.. +.- ..|.++|.. .++.+++ +|.|+++..
T Consensus 374 ~v~~~~~~~eai~~~n~~-~~gLsa~i~t~d~~~~~~~~~~l~-~g~v~iN~~ 424 (465)
T cd07098 374 VVMKASDDEEAVEIANST-EYGLGASVFGKDIKRARRIASQLE-TGMVAINDF 424 (465)
T ss_pred EEEEeCCHHHHHHHHhCC-CCCceEEEEcCCHHHHHHHHHhCC-cceEEECCC
Confidence 566689999999999985 333 567787774 4667776 799999974
No 59
>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed
Probab=77.67 E-value=1.8 Score=40.68 Aligned_cols=49 Identities=18% Similarity=0.157 Sum_probs=36.8
Q ss_pred eEEEeCCHHHHHHHHhhhc-CcceeecccChH---HHHhccchhcccccCCCCc
Q 046320 95 FMVFAREIMRAITFSNLYA-PEHLIVSAKDTE---KWESIIENAGSMLFGEWTP 144 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~A-PEHL~l~~~d~~---~~l~~I~nAGsiFlG~~tp 144 (198)
.++.++|++||++++|..- +=-..+.++|.. .++++++ +|.+|++.++.
T Consensus 369 ~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~-~G~v~iN~~~~ 421 (457)
T PRK09406 369 SLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLE-AGQVFINGMTV 421 (457)
T ss_pred EEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCC-cceEEECCCCC
Confidence 5677899999999999753 223477888874 5677886 79999997543
No 60
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=77.03 E-value=1.9 Score=39.89 Aligned_cols=50 Identities=20% Similarity=0.230 Sum_probs=37.2
Q ss_pred eEEEeCCHHHHHHHHhhhcCcc--eeecccChH---HHHhccchhcccccCCCCccc
Q 046320 95 FMVFAREIMRAITFSNLYAPEH--LIVSAKDTE---KWESIIENAGSMLFGEWTPES 146 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEH--L~l~~~d~~---~~l~~I~nAGsiFlG~~tp~a 146 (198)
.++.++|.+||++++|.. +-- ..|.++|.. .++.+++ +|.|++.......
T Consensus 368 ~v~~~~~~~eai~~~n~~-~~gls~~i~t~d~~~~~~~~~~l~-~g~v~iN~~~~~~ 422 (455)
T cd07093 368 TVIPFDDEEEAIELANDT-PYGLAAYVWTRDLGRAHRVARRLE-AGTVWVNCWLVRD 422 (455)
T ss_pred EEEeeCCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHhCC-cceEEECCCCCCC
Confidence 466688999999999985 333 567777764 5667775 9999999765433
No 61
>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.
Probab=76.75 E-value=1.8 Score=40.70 Aligned_cols=68 Identities=18% Similarity=0.071 Sum_probs=45.6
Q ss_pred eEEEeCCHHHHHHHHhhhcC-cceeecccChH---HHHhccchhcccccCCCCccc-------------cccccCCcccc
Q 046320 95 FMVFAREIMRAITFSNLYAP-EHLIVSAKDTE---KWESIIENAGSMLFGEWTPES-------------ARMYGGVSLDS 157 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~AP-EHL~l~~~d~~---~~l~~I~nAGsiFlG~~tp~a-------------AR~~sgLsv~~ 157 (198)
.|+.++|.+||++++|..-- =-..|.++|.. .+.++++ +|.|++....... .|+.|..+++.
T Consensus 389 ~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~-~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ 467 (488)
T TIGR02299 389 TVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALE-AGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDF 467 (488)
T ss_pred EEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCC-cCeEEECCCCCCCCCCCCCCCccCcCCccchHHHHHH
Confidence 45668999999999998642 23578888874 5677775 8999999644322 44444455556
Q ss_pred ccccch
Q 046320 158 FLKYVT 163 (198)
Q Consensus 158 FlK~~s 163 (198)
|.+.-+
T Consensus 468 ~~~~k~ 473 (488)
T TIGR02299 468 YTETKN 473 (488)
T ss_pred HhceEE
Confidence 665433
No 62
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=76.50 E-value=1.8 Score=40.37 Aligned_cols=50 Identities=14% Similarity=0.014 Sum_probs=36.4
Q ss_pred eEEEeCCHHHHHHHHhhhcC-cceeecccChH---HHHhccchhcccccCCCCcc
Q 046320 95 FMVFAREIMRAITFSNLYAP-EHLIVSAKDTE---KWESIIENAGSMLFGEWTPE 145 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~AP-EHL~l~~~d~~---~~l~~I~nAGsiFlG~~tp~ 145 (198)
.++.++|.+||++++|..-- -...+.++|+. .+.++++ +|.+++...++.
T Consensus 385 ~v~~~~~~~eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~-~G~v~iN~~~~~ 438 (471)
T cd07139 385 SVIPYDDEDDAVRIANDSDYGLSGSVWTADVERGLAVARRIR-TGTVGVNGFRLD 438 (471)
T ss_pred EEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCC-cceEEECCCCCC
Confidence 46668899999999997432 23667788874 4666764 899999975533
No 63
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=76.27 E-value=1.9 Score=39.82 Aligned_cols=68 Identities=16% Similarity=0.163 Sum_probs=45.1
Q ss_pred eEEEeCCHHHHHHHHhhhcCc-ceeecccChH---HHHhccchhcccccCCCCccc--------------cccccCCccc
Q 046320 95 FMVFAREIMRAITFSNLYAPE-HLIVSAKDTE---KWESIIENAGSMLFGEWTPES--------------ARMYGGVSLD 156 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APE-HL~l~~~d~~---~~l~~I~nAGsiFlG~~tp~a--------------AR~~sgLsv~ 156 (198)
.++.++|.+||++++|.--.= -..+.++|+. .+.+++ ++|.++++.++... .|+.|..+++
T Consensus 344 ~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l-~~g~v~vN~~~~~~~~~~PfgG~~~SG~G~~~g~~~l~ 422 (432)
T cd07105 344 SIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRI-ESGAVHINGMTVHDEPTLPHGGVKSSGYGRFNGKWGID 422 (432)
T ss_pred EEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhC-CcCeEEECCCCCCCCCCCCCCCcccccccccChHHHHH
Confidence 466688999999999975321 2577888875 455566 69999999765322 4444444555
Q ss_pred cccccch
Q 046320 157 SFLKYVT 163 (198)
Q Consensus 157 ~FlK~~s 163 (198)
.|.+..+
T Consensus 423 ~~~~~k~ 429 (432)
T cd07105 423 EFTETKW 429 (432)
T ss_pred HhhceEE
Confidence 6655443
No 64
>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase. The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.
Probab=75.82 E-value=2.2 Score=41.03 Aligned_cols=72 Identities=15% Similarity=0.136 Sum_probs=49.2
Q ss_pred eEEEeCCHHHHHHHHhhhcCcce--eecccChHH---HHhccc-hhcccccCCCC------------ccc----------
Q 046320 95 FMVFAREIMRAITFSNLYAPEHL--IVSAKDTEK---WESIIE-NAGSMLFGEWT------------PES---------- 146 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEHL--~l~~~d~~~---~l~~I~-nAGsiFlG~~t------------p~a---------- 146 (198)
.|+.++|.+|+++++|. -|-.| .+.+.|... ++++++ .+|.+|++.++ |..
T Consensus 404 ~V~~~~~~deai~~aN~-~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~~pfGG~k~SG~ 482 (513)
T cd07128 404 TLMPYDSLAEAIELAAR-GRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQLVHGGPGRAGG 482 (513)
T ss_pred EEEeeCCHHHHHHHHhc-CCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCCCCCCCcccCCC
Confidence 46668999999999996 34455 567777754 777887 59999998653 111
Q ss_pred ccccc-CCccccccccchHHHH
Q 046320 147 ARMYG-GVSLDSFLKYVTVQSL 167 (198)
Q Consensus 147 AR~~s-gLsv~~FlK~~s~~~~ 167 (198)
.|..+ .-+++.|++..|++..
T Consensus 483 G~~~gg~~~l~~~~~~k~v~~~ 504 (513)
T cd07128 483 GEELGGLRGVKHYMQRTAVQGS 504 (513)
T ss_pred CcccccHHHHHHhheeeeeeCC
Confidence 44432 3456668887777654
No 65
>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=75.36 E-value=2.1 Score=40.69 Aligned_cols=48 Identities=15% Similarity=0.161 Sum_probs=36.0
Q ss_pred eEEEeCCHHHHHHHHhhhcCc--ceeecccChH---HHHhccchhcccccCCCCc
Q 046320 95 FMVFAREIMRAITFSNLYAPE--HLIVSAKDTE---KWESIIENAGSMLFGEWTP 144 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APE--HL~l~~~d~~---~~l~~I~nAGsiFlG~~tp 144 (198)
.++.++|.+||++++|.. +- -..|.++|+. .+.+++ .+|.|++..++.
T Consensus 404 ~v~~~~~~~eai~~~n~~-~~gLsa~v~t~d~~~a~~~~~~l-~~G~v~iN~~~~ 456 (494)
T PRK09847 404 VVTRFTSEEQALQLANDS-QYGLGAAVWTRDLSRAHRMSRRL-KAGSVFVNNYND 456 (494)
T ss_pred EEEecCCHHHHHHHHhCC-CCCceEEEEcCCHHHHHHHHHhC-CcceEEECCCCC
Confidence 456688999999999984 33 3578888874 466677 479999998543
No 66
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=75.29 E-value=2.2 Score=40.10 Aligned_cols=49 Identities=18% Similarity=0.041 Sum_probs=36.0
Q ss_pred eEEEeCCHHHHHHHHhhhc-CcceeecccCh---HHHHhccchhcccccCCCCc
Q 046320 95 FMVFAREIMRAITFSNLYA-PEHLIVSAKDT---EKWESIIENAGSMLFGEWTP 144 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~A-PEHL~l~~~d~---~~~l~~I~nAGsiFlG~~tp 144 (198)
.++.++|.+||++++|..- +=-..|.++|. ..++++++ +|.|++..++.
T Consensus 388 ~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~-~G~v~iN~~~~ 440 (477)
T cd07113 388 SFVPYEDEEELIQLINDTPFGLTASVWTNNLSKALRYIPRIE-AGTVWVNMHTF 440 (477)
T ss_pred EEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCC-cceEEECCCCC
Confidence 4566889999999999752 22347888886 45667775 89999997643
No 67
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=75.27 E-value=1.8 Score=40.48 Aligned_cols=50 Identities=10% Similarity=-0.027 Sum_probs=36.4
Q ss_pred eEEEeCCHHHHHHHHhhhc-CcceeecccChH---HHHhccchhcccccCCCCcc
Q 046320 95 FMVFAREIMRAITFSNLYA-PEHLIVSAKDTE---KWESIIENAGSMLFGEWTPE 145 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~A-PEHL~l~~~d~~---~~l~~I~nAGsiFlG~~tp~ 145 (198)
.|+.++|.+||++++|..- +--..|.++|.. .+.++++ +|.|++..+...
T Consensus 385 ~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~-~G~v~iN~~~~~ 438 (475)
T PRK13473 385 SVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRAHRVSARLQ-YGCTWVNTHFML 438 (475)
T ss_pred EEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCC-cceEEECCCCCC
Confidence 4566889999999999852 223577888864 5666776 899999975543
No 68
>PLN02203 aldehyde dehydrogenase
Probab=75.04 E-value=2.4 Score=40.54 Aligned_cols=69 Identities=22% Similarity=0.275 Sum_probs=47.4
Q ss_pred eEEEeCCHHHHHHHHhhh-cCcceeecccChH---HHHhccchhcccccCCCCcc-----c----------cccccCCcc
Q 046320 95 FMVFAREIMRAITFSNLY-APEHLIVSAKDTE---KWESIIENAGSMLFGEWTPE-----S----------ARMYGGVSL 155 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~-APEHL~l~~~d~~---~~l~~I~nAGsiFlG~~tp~-----a----------AR~~sgLsv 155 (198)
.++.++|++||++++|.. .+--..+.++|.. .+.++++ +|.|++..++.. . .|+.|..++
T Consensus 353 ~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~-~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l 431 (484)
T PLN02203 353 PIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETS-SGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSF 431 (484)
T ss_pred EEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCC-cceEEECCcccccCCCCCCCCCcCcccCCccccHHHH
Confidence 466789999999999985 2234566888875 5667764 899999975321 1 555565666
Q ss_pred ccccccchH
Q 046320 156 DSFLKYVTV 164 (198)
Q Consensus 156 ~~FlK~~s~ 164 (198)
+.|++..++
T Consensus 432 ~~ft~~k~v 440 (484)
T PLN02203 432 DTFSHEKAV 440 (484)
T ss_pred HHhcceeEE
Confidence 667665443
No 69
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=74.86 E-value=2 Score=40.18 Aligned_cols=68 Identities=19% Similarity=0.157 Sum_probs=45.2
Q ss_pred eEEEeCCHHHHHHHHhhhc-CcceeecccChH---HHHhccchhcccccCCCCccc------------cccccCCccccc
Q 046320 95 FMVFAREIMRAITFSNLYA-PEHLIVSAKDTE---KWESIIENAGSMLFGEWTPES------------ARMYGGVSLDSF 158 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~A-PEHL~l~~~d~~---~~l~~I~nAGsiFlG~~tp~a------------AR~~sgLsv~~F 158 (198)
.++.++|.+||++++|.-- .--..|.++|+. .++++++ +|.||++...... .|+.|.-++..|
T Consensus 380 ~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~-~G~v~iN~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~ 458 (466)
T cd07138 380 SIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARRLR-AGQVHINGAAFNPGAPFGGYKQSGNGREWGRYGLEEF 458 (466)
T ss_pred EEeccCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcC-cceEEECCCCCCCCCCcCCcccccCCccchHHHHHHh
Confidence 4666899999999999852 224567777774 5677775 8999999743221 444444555566
Q ss_pred cccch
Q 046320 159 LKYVT 163 (198)
Q Consensus 159 lK~~s 163 (198)
++..+
T Consensus 459 ~~~k~ 463 (466)
T cd07138 459 LEVKS 463 (466)
T ss_pred cceeE
Confidence 65544
No 70
>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.
Probab=74.16 E-value=2.4 Score=39.71 Aligned_cols=48 Identities=17% Similarity=0.435 Sum_probs=35.3
Q ss_pred eEEEeCCHHHHHHHHhhhcCcce--eecccC-----hHHHHhccc-hhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPEHL--IVSAKD-----TEKWESIIE-NAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEHL--~l~~~d-----~~~~l~~I~-nAGsiFlG~~t 143 (198)
.++-++|.+|+++++|.. +-.| .|.++| ...++.+++ .+|.|+++.++
T Consensus 357 ~v~~~~~~~eai~~~n~~-~~gL~a~vft~d~~~~~a~~~~~~l~~~~G~v~iN~~~ 412 (454)
T cd07129 357 LVVRYDDAAELLAVAEAL-EGQLTATIHGEEDDLALARELLPVLERKAGRLLFNGWP 412 (454)
T ss_pred EEEEeCCHHHHHHHHhcC-CCCcEEEEEccCchHHHHHHHHHHHHhhCcEEEECCCC
Confidence 345578999999999975 3344 567777 345667776 89999999764
No 71
>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like. N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
Probab=74.13 E-value=30 Score=32.28 Aligned_cols=48 Identities=17% Similarity=0.088 Sum_probs=35.6
Q ss_pred eEEEeCCHHHHHHHHhhhcCcc--eeecccChH---HHHhccchhcccccCCCCc
Q 046320 95 FMVFAREIMRAITFSNLYAPEH--LIVSAKDTE---KWESIIENAGSMLFGEWTP 144 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEH--L~l~~~d~~---~~l~~I~nAGsiFlG~~tp 144 (198)
.++.++|.+||++++|.. +-- ..|.++|.. ++..++ ++|.+++...+.
T Consensus 344 ~v~~~~~~~eai~~~n~~-~~gL~a~v~s~d~~~a~~~~~~l-~~G~v~iN~~~~ 396 (431)
T cd07095 344 QVYRYDDFDEAIALANAT-RFGLSAGLLSDDEALFERFLARI-RAGIVNWNRPTT 396 (431)
T ss_pred EEEeeCCHHHHHHHHhCC-CCCCeEEEEcCCHHHHHHHHHhC-CcceEEECCCCC
Confidence 456688999999999974 322 577888874 466666 599999996543
No 72
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.
Probab=74.11 E-value=2.6 Score=39.39 Aligned_cols=51 Identities=20% Similarity=0.118 Sum_probs=36.8
Q ss_pred eEEEeCCHHHHHHHHhhhcC-cceeecccChH---HHHhccchhcccccCCCCccc
Q 046320 95 FMVFAREIMRAITFSNLYAP-EHLIVSAKDTE---KWESIIENAGSMLFGEWTPES 146 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~AP-EHL~l~~~d~~---~~l~~I~nAGsiFlG~~tp~a 146 (198)
.++.++|++||++++|..-- --..+.++|.. .+.+++ .+|.+++..++...
T Consensus 367 ~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l-~~g~v~iN~~~~~~ 421 (454)
T cd07118 367 SVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRI-RAGTVWVNTFLDGS 421 (454)
T ss_pred EEEEECCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhc-CcCEEEECCCCCCC
Confidence 46668999999999998421 23677788864 456666 49999999765533
No 73
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=73.89 E-value=2.4 Score=39.94 Aligned_cols=47 Identities=19% Similarity=0.227 Sum_probs=35.9
Q ss_pred eEEEeCCHHHHHHHHhhhcCcce--eecccCh---HHHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPEHL--IVSAKDT---EKWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEHL--~l~~~d~---~~~l~~I~nAGsiFlG~~t 143 (198)
.|+.++|.+||++++|.. +-.| .+.++|+ ..+.++++ +|.+++....
T Consensus 392 ~V~~~~~~~eai~~~n~~-~~gL~~~v~t~d~~~~~~~~~~l~-~G~v~iN~~~ 443 (481)
T TIGR03216 392 HIAPFDSEEEVIALANDT-PYGLAASVWTEDLSRAHRVARQME-VGIVWVNSWF 443 (481)
T ss_pred EEEEeCCHHHHHHHHhCC-CccceEEEECCCHHHHHHHHHhcC-ccEEEECCCC
Confidence 466689999999999975 3444 6778787 45667765 9999999644
No 74
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=73.86 E-value=2.8 Score=41.63 Aligned_cols=80 Identities=13% Similarity=0.164 Sum_probs=53.3
Q ss_pred eEEEeCCHHHHHHHHhhhcCc--ceeecccCh---HHHHhccc-hhccccc-CC--------CC---ccc----------
Q 046320 95 FMVFAREIMRAITFSNLYAPE--HLIVSAKDT---EKWESIIE-NAGSMLF-GE--------WT---PES---------- 146 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APE--HL~l~~~d~---~~~l~~I~-nAGsiFl-G~--------~t---p~a---------- 146 (198)
.|+.++|.+||++++|.- +- -..|.++|. ..+.++++ ++|.||+ +. ++ |..
T Consensus 396 ~V~~~~~~~eai~~aN~~-~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~SG~ 474 (663)
T TIGR02278 396 TFFPYGDRAEAARLAARG-GGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAGG 474 (663)
T ss_pred EEEeeCCHHHHHHHHHcC-CCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCccCcC
Confidence 466689999999999974 22 357888888 56778887 8999999 53 11 221
Q ss_pred cccccC-CccccccccchHHHH-HHHHHhhC
Q 046320 147 ARMYGG-VSLDSFLKYVTVQSL-ATMAEIEG 175 (198)
Q Consensus 147 AR~~sg-Lsv~~FlK~~s~~~~-~~lA~~EG 175 (198)
.|..+| .++++|++..+++.. --||..-|
T Consensus 475 G~~~g~~~~l~~f~~~k~v~~~~~~~~~~~~ 505 (663)
T TIGR02278 475 GEELGGLRSVKHYMQRTAIQGSPWLLAALTG 505 (663)
T ss_pred CCccchHHHHHHhceeEEEEcCHHHHHHHhc
Confidence 555433 566778888777655 33444333
No 75
>PRK10090 aldehyde dehydrogenase A; Provisional
Probab=73.83 E-value=2.6 Score=39.20 Aligned_cols=50 Identities=16% Similarity=0.048 Sum_probs=35.7
Q ss_pred eEEEeCCHHHHHHHHhhhcCcce--eecccChH---HHHhccchhcccccCCCCccc
Q 046320 95 FMVFAREIMRAITFSNLYAPEHL--IVSAKDTE---KWESIIENAGSMLFGEWTPES 146 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEHL--~l~~~d~~---~~l~~I~nAGsiFlG~~tp~a 146 (198)
.++.++|++||++++|.. |-.| .+.++|.. .+.++++ +|.+++.......
T Consensus 319 ~v~~~~~~~eai~~~n~~-~~gL~~~vft~d~~~~~~~~~~l~-~G~v~iN~~~~~~ 373 (409)
T PRK10090 319 PVVAFDTLEEAIAMANDS-DYGLTSSIYTQNLNVAMKAIKGLK-FGETYINRENFEA 373 (409)
T ss_pred EEEEECCHHHHHHHHhCC-CCCceEEEEcCCHHHHHHHHHhCC-cceEEECCCCCCC
Confidence 466789999999999974 3224 56677764 4667775 6999998655433
No 76
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=73.81 E-value=23 Score=33.86 Aligned_cols=47 Identities=13% Similarity=0.099 Sum_probs=34.5
Q ss_pred eEEEeCCHHHHHHHHhhhcCcc--eeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPEH--LIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEH--L~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|++||++++|.. +-. ..|.++|.. .+..++ .+|.|++..++
T Consensus 419 ~v~~~~~~deai~~~n~~-~~gL~a~i~t~d~~~~~~~~~~l-~~G~v~iN~~~ 470 (511)
T TIGR01237 419 AIIRAADFDEALEIANGT-EYGLTGGVYSNTRDHIERAAAEF-EVGNLYFNRTI 470 (511)
T ss_pred EEEeeCCHHHHHHHHhCC-CCCCeEEEEcCCHHHHHHHHHhC-CcceEEECCCC
Confidence 455688999999999984 444 478888874 455555 46999999764
No 77
>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins. NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.
Probab=73.66 E-value=3.3 Score=38.77 Aligned_cols=68 Identities=19% Similarity=0.157 Sum_probs=46.5
Q ss_pred eEEEeCCHHHHHHHHhhhcCcc-eeecccChHH---HHhccchhcccccCCCC-----ccc----------cccccCCcc
Q 046320 95 FMVFAREIMRAITFSNLYAPEH-LIVSAKDTEK---WESIIENAGSMLFGEWT-----PES----------ARMYGGVSL 155 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEH-L~l~~~d~~~---~l~~I~nAGsiFlG~~t-----p~a----------AR~~sgLsv 155 (198)
.++.++|++||++++|..--=| ..|.++|... +.++++ +|.|++..++ |.. .|+.|..++
T Consensus 337 ~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~-~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l 415 (443)
T cd07132 337 PIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTS-SGGVCVNDTIMHYTLDSLPFGGVGNSGMGAYHGKYSF 415 (443)
T ss_pred EEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCC-cceEEECCcccccCCCCCCCCCCCcccCCCcccHHHH
Confidence 4566889999999999843222 5677888754 667775 7999998653 211 566666667
Q ss_pred ccccccch
Q 046320 156 DSFLKYVT 163 (198)
Q Consensus 156 ~~FlK~~s 163 (198)
++|++..+
T Consensus 416 ~~~~~~k~ 423 (443)
T cd07132 416 DTFSHKRS 423 (443)
T ss_pred HHhccccE
Confidence 77776444
No 78
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=73.40 E-value=2.1 Score=39.76 Aligned_cols=47 Identities=21% Similarity=0.128 Sum_probs=35.4
Q ss_pred eEEEeCCHHHHHHHHhhhcCcce--eecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPEHL--IVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEHL--~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|.+||++++|.. +--| .|.+.|.. .+.++++ +|.+++...+
T Consensus 369 ~v~~~~~~~eai~~~n~~-~~gL~~~v~t~d~~~~~~~~~~l~-~G~v~iN~~~ 420 (456)
T cd07110 369 CVRSFATEDEAIALANDS-EYGLAAAVISRDAERCDRVAEALE-AGIVWINCSQ 420 (456)
T ss_pred EEEecCCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHhCC-cceEEECCCC
Confidence 456688999999999984 4444 67777764 4566664 9999999754
No 79
>PLN02467 betaine aldehyde dehydrogenase
Probab=73.19 E-value=2.5 Score=40.41 Aligned_cols=47 Identities=17% Similarity=0.017 Sum_probs=35.8
Q ss_pred eEEEeCCHHHHHHHHhhhcCcc--eeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPEH--LIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEH--L~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|.+||++++|.. +-. ..+.++|.. .+.++++ +|.+++..++
T Consensus 400 ~v~~~~~~~eAi~~aN~~-~~gL~a~v~t~d~~~a~~~~~~l~-~G~v~iN~~~ 451 (503)
T PLN02467 400 CVKTFSTEDEAIELANDS-HYGLAGAVISNDLERCERVSEAFQ-AGIVWINCSQ 451 (503)
T ss_pred EEEeeCCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHhCC-cceEEECCCC
Confidence 466688999999999985 333 477788874 4667775 9999999754
No 80
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=73.09 E-value=2.8 Score=39.09 Aligned_cols=48 Identities=13% Similarity=0.040 Sum_probs=35.3
Q ss_pred eEEEeCCHHHHHHHHhhhcC-cceeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAP-EHLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~AP-EHL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|.+||++++|..-- --..+.++|.. .+..+++ +|.+++...+
T Consensus 367 ~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~l~-~G~v~iN~~~ 418 (456)
T cd07107 367 SVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVE-AGYVWINGSS 418 (456)
T ss_pred EEEeeCCHHHHHHHHhCCCCcceEEEECCCHHHHHHHHHhcC-cCEEEECCCC
Confidence 46678999999999998521 23477888864 4555664 8999999654
No 81
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=72.38 E-value=2.8 Score=39.52 Aligned_cols=47 Identities=17% Similarity=0.075 Sum_probs=35.8
Q ss_pred eEEEeCCHHHHHHHHhhhcCc--ceeecccCh---HHHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPE--HLIVSAKDT---EKWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APE--HL~l~~~d~---~~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|.+||++++|.. |- -..|.++|. +++.++++ +|.+++..+.
T Consensus 392 ~v~~~~~~~eai~~~n~~-~~gL~a~I~t~d~~~~~~~~~~l~-~G~v~iN~~~ 443 (488)
T PRK13252 392 SVLTFDDEDEVIARANDT-EYGLAAGVFTADLSRAHRVIHQLE-AGICWINTWG 443 (488)
T ss_pred EEEeeCCHHHHHHHHhCC-CCCCeEEEEeCCHHHHHHHHHhcC-ccEEEECCCC
Confidence 456689999999999985 33 356777876 45677886 7999999753
No 82
>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.
Probab=72.11 E-value=2.9 Score=39.53 Aligned_cols=49 Identities=12% Similarity=0.051 Sum_probs=36.4
Q ss_pred eEEEeCCHHHHHHHHhhh-cCcceeecccChH---HHHhccchhcccccCCCCc
Q 046320 95 FMVFAREIMRAITFSNLY-APEHLIVSAKDTE---KWESIIENAGSMLFGEWTP 144 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~-APEHL~l~~~d~~---~~l~~I~nAGsiFlG~~tp 144 (198)
.++.++|.+||++++|.- .+=-..+.++|.. ++.+++ .+|.|++..+..
T Consensus 386 ~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l-~~G~v~iN~~~~ 438 (475)
T cd07117 386 TVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALRVARAV-ETGRVWVNTYNQ 438 (475)
T ss_pred EEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhC-CcceEEECCCCC
Confidence 456688999999999974 1234678888864 456778 599999997543
No 83
>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.
Probab=72.01 E-value=2.5 Score=39.71 Aligned_cols=48 Identities=19% Similarity=0.084 Sum_probs=35.5
Q ss_pred eEEEeCCHHHHHHHHhhhc-CcceeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYA-PEHLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~A-PEHL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|++||++++|..- +--..|.++|+. .++++++ +|.+++...+
T Consensus 395 ~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~-~G~v~iN~~~ 446 (484)
T cd07144 395 VISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELE-AGMVWINSSN 446 (484)
T ss_pred EEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcC-cCEEEECCCC
Confidence 4556789999999999852 123578888874 5666774 8999999743
No 84
>TIGR01804 BADH glycine betaine aldehyde dehydrogenase. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).
Probab=71.95 E-value=3.5 Score=38.55 Aligned_cols=51 Identities=14% Similarity=0.068 Sum_probs=37.6
Q ss_pred eEEEeCCHHHHHHHHhhhcC-cceeecccCh---HHHHhccchhcccccCCCCccc
Q 046320 95 FMVFAREIMRAITFSNLYAP-EHLIVSAKDT---EKWESIIENAGSMLFGEWTPES 146 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~AP-EHL~l~~~d~---~~~l~~I~nAGsiFlG~~tp~a 146 (198)
.++.++|.+||++++|..-- --..|.++|. ..+.+++ .+|.+++..++...
T Consensus 384 ~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l-~~G~v~iN~~~~~~ 438 (467)
T TIGR01804 384 TVLTFSSEDEVIARANDTIYGLAAGVFTADLGRAHRVANQL-KAGTVWINDFHPYP 438 (467)
T ss_pred EEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhC-CcceEEECCCCCCC
Confidence 46668899999999998532 2357788887 4567777 67999999765443
No 85
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=71.59 E-value=3.1 Score=39.11 Aligned_cols=48 Identities=15% Similarity=0.043 Sum_probs=35.5
Q ss_pred eEEEeCCHHHHHHHHhhhc-CcceeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYA-PEHLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~A-PEHL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|.+||++++|..- +=-..|.++|.. .+.+++ .+|.|++..+.
T Consensus 390 ~v~~~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l-~~G~v~iN~~~ 441 (479)
T cd07116 390 AVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGI-QAGRVWTNCYH 441 (479)
T ss_pred EEEEeCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhc-CcCeEEECCCC
Confidence 4666899999999999843 223578888875 556666 57999999644
No 86
>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.
Probab=71.30 E-value=4.1 Score=38.50 Aligned_cols=67 Identities=18% Similarity=0.163 Sum_probs=45.5
Q ss_pred eEEEeCCHHHHHHHHhhhcCcce--eecccChH---HHHhccchhcccccCCCC-----ccc----------cccccCCc
Q 046320 95 FMVFAREIMRAITFSNLYAPEHL--IVSAKDTE---KWESIIENAGSMLFGEWT-----PES----------ARMYGGVS 154 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEHL--~l~~~d~~---~~l~~I~nAGsiFlG~~t-----p~a----------AR~~sgLs 154 (198)
.++.++|++||++++|.. |-.| .|.++|.. .+..+++ +|.+++...+ |.. .|..|..+
T Consensus 337 ~v~~~~~~~eai~~aN~~-~~gL~a~v~t~d~~~a~~~~~~l~-~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~ 414 (449)
T cd07136 337 PVLTYDTLDEAIEIIKSR-PKPLALYLFSEDKKVEKKVLENLS-FGGGCINDTIMHLANPYLPFGGVGNSGMGSYHGKYS 414 (449)
T ss_pred EEEEeCCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHhCC-cceEEECCccccccCCCCCccCcCcccCCcccCHHH
Confidence 566789999999999985 4444 56788875 4677775 8999998643 111 55555556
Q ss_pred cccccccch
Q 046320 155 LDSFLKYVT 163 (198)
Q Consensus 155 v~~FlK~~s 163 (198)
++.|++..+
T Consensus 415 l~~~t~~k~ 423 (449)
T cd07136 415 FDTFSHKKS 423 (449)
T ss_pred HHHhccceE
Confidence 666666433
No 87
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=71.08 E-value=3.3 Score=41.10 Aligned_cols=47 Identities=13% Similarity=0.059 Sum_probs=37.3
Q ss_pred eEEEeCCHHHHHHHHhhhcCcce--eecccCh---HHHHhccc-hhcccccCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPEHL--IVSAKDT---EKWESIIE-NAGSMLFGEW 142 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEHL--~l~~~d~---~~~l~~I~-nAGsiFlG~~ 142 (198)
.|+.++|.+||++++|. .|--| .+.++|. +++.++++ ++|.|++..+
T Consensus 408 ~V~~~~~~~eai~~aN~-s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~ 460 (675)
T PRK11563 408 TLMPYDDLDEAIELAAR-GKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNR 460 (675)
T ss_pred EEEecCCHHHHHHHHhc-CCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCc
Confidence 46778999999999996 33345 7788887 67888888 6999999853
No 88
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=69.84 E-value=3.3 Score=38.83 Aligned_cols=48 Identities=13% Similarity=0.101 Sum_probs=34.9
Q ss_pred eEEEeCCHHHHHHHHhhhcC-cceeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAP-EHLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~AP-EHL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|++||++++|..-- --..+.++|.. .+++++ ++|.+++...+
T Consensus 384 ~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l-~~g~v~iN~~~ 435 (473)
T cd07097 384 AVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFKRRV-EAGVVMVNLPT 435 (473)
T ss_pred EEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhC-CcCeEEECCCC
Confidence 45668899999999997522 23677788874 455666 49999999654
No 89
>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11. NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.
Probab=69.77 E-value=3.6 Score=38.45 Aligned_cols=48 Identities=17% Similarity=0.184 Sum_probs=36.9
Q ss_pred eEEEeCCHHHHHHHHhhhc-CcceeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYA-PEHLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~A-PEHL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|++|+++++|..- +--..+.++|+. .+++++ .+|.++++.++
T Consensus 384 ~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l-~~G~v~iN~~~ 435 (473)
T cd07082 384 PIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKLADAL-EVGTVNINSKC 435 (473)
T ss_pred EEEEeCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhC-CcceEEECCCC
Confidence 4666899999999999841 124578888875 477777 79999999865
No 90
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=69.75 E-value=5.2 Score=40.76 Aligned_cols=70 Identities=16% Similarity=0.150 Sum_probs=49.5
Q ss_pred eEEEeCCHHHHHHHHhhh-----cCcceeecccChHH---HHhccchhcccccCCCCcc-------------c-------
Q 046320 95 FMVFAREIMRAITFSNLY-----APEHLIVSAKDTEK---WESIIENAGSMLFGEWTPE-------------S------- 146 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~-----APEHL~l~~~d~~~---~l~~I~nAGsiFlG~~tp~-------------a------- 146 (198)
.++.++|++||++++|.. .+--+.|.++|... +..++ .+|.|++...+.. .
T Consensus 349 ~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~~~~l-~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~G~~ 427 (862)
T PRK13805 349 AMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEFGLRM-KACRILVNTPSSQGGIGDLYNKLAPSLTLGCGSW 427 (862)
T ss_pred EEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHhhC-CccEEEEeCCccccccccccCCcCccccccccCC
Confidence 456689999999999984 45568889988753 44454 5777777654321 1
Q ss_pred --cccccCCccccccccchHH
Q 046320 147 --ARMYGGVSLDSFLKYVTVQ 165 (198)
Q Consensus 147 --AR~~sgLsv~~FlK~~s~~ 165 (198)
.++.+..++.+|....++.
T Consensus 428 g~~~~~g~~g~~~~~~~k~v~ 448 (862)
T PRK13805 428 GGNSVSENVGAKHLLNIKTVA 448 (862)
T ss_pred CCCcCCCCCCHHHhheeeeee
Confidence 7777888888887766655
No 91
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=68.97 E-value=3.4 Score=38.41 Aligned_cols=47 Identities=15% Similarity=0.131 Sum_probs=35.4
Q ss_pred eEEEeCCHHHHHHHHhhhcCc--ceeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPE--HLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APE--HL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|++||++++|.. +- -..|.++|+. .+++++ .+|.+|+..++
T Consensus 366 ~v~~~~~~deAi~~~n~~-~~gL~~~i~t~d~~~~~~~~~~l-~~g~v~iN~~~ 417 (454)
T cd07109 366 AVMPFDDEAEAIALANGT-DYGLVAGVWTRDGDRALRVARRL-RAGQVFVNNYG 417 (454)
T ss_pred EEEecCCHHHHHHHhhCC-CCCceEEEECCCHHHHHHHHHhc-CcCeEEECCCC
Confidence 456688999999999984 33 2478888874 456666 58999999765
No 92
>PRK11903 aldehyde dehydrogenase; Provisional
Probab=68.86 E-value=4.1 Score=39.29 Aligned_cols=46 Identities=11% Similarity=0.047 Sum_probs=36.3
Q ss_pred eEEEeCCHHHHHHHHhhhcCcc--eeecccChH---HHHhccc-hhcccccCC
Q 046320 95 FMVFAREIMRAITFSNLYAPEH--LIVSAKDTE---KWESIIE-NAGSMLFGE 141 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEH--L~l~~~d~~---~~l~~I~-nAGsiFlG~ 141 (198)
.|+-++|.+|+++++|.- |-- ..|.++|.. .++++++ ++|.||++.
T Consensus 407 ~V~~~~~~~eai~~~N~~-~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~ 458 (521)
T PRK11903 407 TLLPYRDAAHALALARRG-QGSLVASVYSDDAAFLAAAALELADSHGRVHVIS 458 (521)
T ss_pred EEEeeCCHHHHHHHHhcC-CCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcC
Confidence 466689999999999984 444 477888885 5677775 799999995
No 93
>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.
Probab=68.35 E-value=3.2 Score=39.05 Aligned_cols=68 Identities=15% Similarity=0.189 Sum_probs=43.7
Q ss_pred eEEEeCCHHHHHHHHhhhcCcc--eeecccChHHHHhcc----chhcccccCCCCccc--------------cccccCCc
Q 046320 95 FMVFAREIMRAITFSNLYAPEH--LIVSAKDTEKWESII----ENAGSMLFGEWTPES--------------ARMYGGVS 154 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEH--L~l~~~d~~~~l~~I----~nAGsiFlG~~tp~a--------------AR~~sgLs 154 (198)
.++.++|.+||++++|.. |-. ..+.++|.....+-+ -++|.|++...+... .|+.|.-+
T Consensus 381 ~v~~~~~~~eai~~aN~~-~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~ 459 (474)
T cd07130 381 YVLKFDTLEEAIAWNNEV-PQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGSDA 459 (474)
T ss_pred EEEEeCCHHHHHHHHhCC-CCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCCccchHHH
Confidence 355688999999999985 443 477888865444333 368999998633211 45555555
Q ss_pred cccccccch
Q 046320 155 LDSFLKYVT 163 (198)
Q Consensus 155 v~~FlK~~s 163 (198)
++.|++..+
T Consensus 460 ~~~f~~~k~ 468 (474)
T cd07130 460 WKQYMRRST 468 (474)
T ss_pred HHHHhheEE
Confidence 666666543
No 94
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=68.17 E-value=3.9 Score=39.57 Aligned_cols=67 Identities=13% Similarity=0.107 Sum_probs=45.5
Q ss_pred eEEEeCCHHHHHHHHhhhc-CcceeecccCh---HHHHhccchhcccccCCCCccc-------------cccccCCcccc
Q 046320 95 FMVFAREIMRAITFSNLYA-PEHLIVSAKDT---EKWESIIENAGSMLFGEWTPES-------------ARMYGGVSLDS 157 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~A-PEHL~l~~~d~---~~~l~~I~nAGsiFlG~~tp~a-------------AR~~sgLsv~~ 157 (198)
.++.++|+|||++++|..- +--..|.++|. ..+++++ .+|.|++..+.... .|+.|.-++++
T Consensus 443 ~v~~~~d~deAi~~aN~~~~GL~a~VfT~d~~~a~~~~~~l-~aG~v~IN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ 521 (538)
T PLN02466 443 SILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRAL-RVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNN 521 (538)
T ss_pred EEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhC-CeeeEEECCCCCCCCCCCcCCCCcCccCcccHHHHHHH
Confidence 4566899999999999862 22367888887 4577777 49999999643222 44444455556
Q ss_pred ccccc
Q 046320 158 FLKYV 162 (198)
Q Consensus 158 FlK~~ 162 (198)
|.+.-
T Consensus 522 ft~~k 526 (538)
T PLN02466 522 YLQVK 526 (538)
T ss_pred hcceE
Confidence 66543
No 95
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=68.03 E-value=13 Score=34.90 Aligned_cols=49 Identities=16% Similarity=0.169 Sum_probs=36.9
Q ss_pred eEEEeCCHHHHHHHHhhhcCc-ceeecccChH---HHHhccchhcccccCCCCc
Q 046320 95 FMVFAREIMRAITFSNLYAPE-HLIVSAKDTE---KWESIIENAGSMLFGEWTP 144 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APE-HL~l~~~d~~---~~l~~I~nAGsiFlG~~tp 144 (198)
.++.++|++||++++|..-=- -..|.++|.. .++.++ ++|.|++...++
T Consensus 385 ~V~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~ 437 (477)
T TIGR01722 385 CVLEADTLEEAIALINASPYGNGTAIFTRDGAAARRFQHEI-EVGQVGVNVPIP 437 (477)
T ss_pred EEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhC-CeeeEEECCCCC
Confidence 466789999999999963211 1889999985 466777 689999996443
No 96
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=68.01 E-value=14 Score=30.17 Aligned_cols=81 Identities=17% Similarity=0.128 Sum_probs=58.6
Q ss_pred HHHHHHHhhc-cCCCCceEEEecCchHhHHHHHHHHHHHHhhCCceEEEe--------CCHHHHHHHHhhhcCcceeecc
Q 046320 51 LHVAADLLSQ-RGPDSQGVLVIVGDGVDIKAIEEEIRMQCQSLPNFMVFA--------REIMRAITFSNLYAPEHLIVSA 121 (198)
Q Consensus 51 ~~vAaDLLaQ-Hdp~a~avLvt~~~~l~~~~V~~~i~~~l~~l~g~iv~v--------~~l~eai~~~N~~APEHL~l~~ 121 (198)
.-+.-+||.+ ...+-+.+|+-.+++.+ ++..+.+.++-+.+ -++- ++.++.++.+|...|..+-+.+
T Consensus 32 ~dl~~~ll~~~~~~~~~v~llG~~~~~~-~~~~~~l~~~yp~l---~i~g~~~g~~~~~~~~~i~~~I~~~~pdiv~vgl 107 (171)
T cd06533 32 SDLMPALLELAAQKGLRVFLLGAKPEVL-EKAAERLRARYPGL---KIVGYHHGYFGPEEEEEIIERINASGADILFVGL 107 (171)
T ss_pred HHHHHHHHHHHHHcCCeEEEECCCHHHH-HHHHHHHHHHCCCc---EEEEecCCCCChhhHHHHHHHHHHcCCCEEEEEC
Confidence 4457788888 55567888998888884 87777777654443 3321 2345579999999999999999
Q ss_pred cCh--HHHHhccchhc
Q 046320 122 KDT--EKWESIIENAG 135 (198)
Q Consensus 122 ~d~--~~~l~~I~nAG 135 (198)
-.| +.|+.+.++..
T Consensus 108 G~PkQE~~~~~~~~~l 123 (171)
T cd06533 108 GAPKQELWIARHKDRL 123 (171)
T ss_pred CCCHHHHHHHHHHHHC
Confidence 888 56777766654
No 97
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=67.93 E-value=3.9 Score=38.51 Aligned_cols=49 Identities=12% Similarity=0.051 Sum_probs=34.4
Q ss_pred eEEEeCCHHHHHHHHhhhcC-cceeecccChHHHHhccc----hhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAP-EHLIVSAKDTEKWESIIE----NAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~AP-EHL~l~~~d~~~~l~~I~----nAGsiFlG~~t 143 (198)
.++.++|+|||++++|..-- --..+.++|......-++ .+|.+++...+
T Consensus 385 ~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~ 438 (478)
T cd07086 385 YVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPT 438 (478)
T ss_pred EEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCC
Confidence 46668999999999998522 235788888754433333 37999998753
No 98
>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family. The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.
Probab=67.63 E-value=65 Score=29.54 Aligned_cols=68 Identities=15% Similarity=0.223 Sum_probs=42.0
Q ss_pred EEEeCCHH----HHHHHHhhhc-CcceeecccChH---HHHhccchhcccccCCCCccc-----------------cccc
Q 046320 96 MVFAREIM----RAITFSNLYA-PEHLIVSAKDTE---KWESIIENAGSMLFGEWTPES-----------------ARMY 150 (198)
Q Consensus 96 iv~v~~l~----eai~~~N~~A-PEHL~l~~~d~~---~~l~~I~nAGsiFlG~~tp~a-----------------AR~~ 150 (198)
++-++|.+ +|++++|..- +--..|.+.|.. .+.++++ +|.|++...+... .|+.
T Consensus 302 v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~-~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~ 380 (397)
T cd07077 302 QFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYID-TASFYPNESSKKGRGAFAGKGVERIVTSGMNNIF 380 (397)
T ss_pred EEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCC-EEEEEEeCCccCCCccccCCCcceEEEccccCCC
Confidence 35568886 5566777654 334677787774 5556666 7788777544321 4555
Q ss_pred c-CCccccccccchH
Q 046320 151 G-GVSLDSFLKYVTV 164 (198)
Q Consensus 151 s-gLsv~~FlK~~s~ 164 (198)
+ +.+++.|+...++
T Consensus 381 g~~~~~~~~~~~k~v 395 (397)
T cd07077 381 GAGVGHDALRPLKRL 395 (397)
T ss_pred CCCCChHHhcceeEe
Confidence 5 6667777665543
No 99
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=67.28 E-value=29 Score=37.24 Aligned_cols=42 Identities=21% Similarity=0.135 Sum_probs=31.4
Q ss_pred CHHHHHHHHhhhcCc-ceeecccChH---HHHhccchhcccccCCCC
Q 046320 101 EIMRAITFSNLYAPE-HLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 101 ~l~eai~~~N~~APE-HL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
+++|+++++|..--= -..|.++|+. .+.++++ +|.+|++..+
T Consensus 933 dldeaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~-aGnvyIN~~~ 978 (1208)
T PRK11905 933 ELDRVIDDINATGYGLTFGLHSRIDETIAHVTSRIR-AGNIYVNRNI 978 (1208)
T ss_pred CHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCC-EeEEEECCCC
Confidence 799999999975421 3567777774 5667776 9999999754
No 100
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=66.88 E-value=4.5 Score=38.60 Aligned_cols=46 Identities=17% Similarity=0.173 Sum_probs=35.1
Q ss_pred eEEEeCCHHHHHHHHhhhcCcc--eeecccChH---HHHhccchhcccccCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPEH--LIVSAKDTE---KWESIIENAGSMLFGEW 142 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEH--L~l~~~d~~---~~l~~I~nAGsiFlG~~ 142 (198)
.++.++|++||++++|.. |-. ..+.++|.. .+.++++ +|.++++..
T Consensus 422 ~v~~~~~~~eai~~~N~~-~~gL~a~v~t~d~~~a~~~~~~l~-~G~v~IN~~ 472 (514)
T PRK03137 422 AFIKAKDFDHALEIANNT-EYGLTGAVISNNREHLEKARREFH-VGNLYFNRG 472 (514)
T ss_pred EEEecCCHHHHHHHHhCC-CCCceEEEEcCCHHHHHHHHHhCC-cCeEEECCC
Confidence 466688999999999987 444 477888875 4556664 899999964
No 101
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=66.82 E-value=4.2 Score=38.11 Aligned_cols=46 Identities=15% Similarity=0.090 Sum_probs=34.7
Q ss_pred eEEEeCCHHHHHHHHhhhcCc--ceeecccChH---HHHhccchhcccccCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPE--HLIVSAKDTE---KWESIIENAGSMLFGEW 142 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APE--HL~l~~~d~~---~~l~~I~nAGsiFlG~~ 142 (198)
.++.++|++||++++|.. |. -..|.++|+. ++.+++ ++|.+++...
T Consensus 389 ~v~~~~~~~eai~~~n~~-~~gLsa~v~t~d~~~~~~~~~~l-~~g~v~iN~~ 439 (476)
T cd07091 389 TILKFKTEDEVIERANDT-EYGLAAGVFTKDINKALRVSRAL-KAGTVWVNTY 439 (476)
T ss_pred EEeecCCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHhc-CcceEEECCC
Confidence 455689999999999985 33 3567888874 456666 5899999874
No 102
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=66.28 E-value=4.1 Score=38.44 Aligned_cols=47 Identities=15% Similarity=0.075 Sum_probs=36.2
Q ss_pred eEEEeCCHHHHHHHHhhhcCc--ceeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPE--HLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APE--HL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|.+|+++++|.. |- -..|.++|.. .+++++ ++|.+++..+.
T Consensus 391 ~v~~~~~~~eai~~~n~~-~~gL~~~v~t~d~~~a~~~a~~l-~~G~v~iN~~~ 442 (480)
T cd07559 391 AVITFKDEEEAIAIANDT-EYGLGGGVWTRDINRALRVARGI-QTGRVWVNCYH 442 (480)
T ss_pred EEEeeCCHHHHHHHHhCC-CCCCeEEEECCCHHHHHHHHHhc-CcceEEECCCC
Confidence 566789999999999985 33 3578888864 466677 59999999654
No 103
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=66.05 E-value=27 Score=36.93 Aligned_cols=43 Identities=12% Similarity=0.099 Sum_probs=31.9
Q ss_pred CHHHHHHHHhhhcC-cceeecccChH---HHHhccchhcccccCCCCc
Q 046320 101 EIMRAITFSNLYAP-EHLIVSAKDTE---KWESIIENAGSMLFGEWTP 144 (198)
Q Consensus 101 ~l~eai~~~N~~AP-EHL~l~~~d~~---~~l~~I~nAGsiFlG~~tp 144 (198)
+++|+++++|.--= ==..|.+.|+. .+.++++ +|.+|++..+.
T Consensus 941 ~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~-aG~vyIN~~~~ 987 (1038)
T PRK11904 941 DLDKVIDAINATGYGLTLGIHSRIEETADRIADRVR-VGNVYVNRNQI 987 (1038)
T ss_pred CHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCC-EEEEEEeCCCc
Confidence 79999999997431 13567777864 5677776 99999997543
No 104
>PLN02315 aldehyde dehydrogenase family 7 member
Probab=65.99 E-value=4.2 Score=39.02 Aligned_cols=69 Identities=17% Similarity=0.215 Sum_probs=45.9
Q ss_pred eEEEeCCHHHHHHHHhhhcCcc--eeecccChHHHHhcc----chhcccccCCCCccc--------------cccccCCc
Q 046320 95 FMVFAREIMRAITFSNLYAPEH--LIVSAKDTEKWESII----ENAGSMLFGEWTPES--------------ARMYGGVS 154 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEH--L~l~~~d~~~~l~~I----~nAGsiFlG~~tp~a--------------AR~~sgLs 154 (198)
.|+.++|++||++++|.. |-. ..+.++|......-+ -.+|.|++...+... .|+.|.-+
T Consensus 403 ~V~~~~~~deai~~aN~~-~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~ 481 (508)
T PLN02315 403 YVMKFKTLEEAIEINNSV-PQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDS 481 (508)
T ss_pred EEEEeCCHHHHHHHHhCC-CCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCCccchHHH
Confidence 355578999999999975 334 478888876554433 368999999743221 55555556
Q ss_pred cccccccchH
Q 046320 155 LDSFLKYVTV 164 (198)
Q Consensus 155 v~~FlK~~s~ 164 (198)
++.|++..++
T Consensus 482 l~~ft~~k~v 491 (508)
T PLN02315 482 WKQYMRRSTC 491 (508)
T ss_pred HHHHhhEEEE
Confidence 6677766553
No 105
>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1.2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....
Probab=65.52 E-value=4 Score=38.02 Aligned_cols=50 Identities=18% Similarity=0.160 Sum_probs=36.7
Q ss_pred eEEEeCCHHHHHHHHhhhcCc--ceeecccCh---HHHHhccchhcccccCCCCccc
Q 046320 95 FMVFAREIMRAITFSNLYAPE--HLIVSAKDT---EKWESIIENAGSMLFGEWTPES 146 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APE--HL~l~~~d~---~~~l~~I~nAGsiFlG~~tp~a 146 (198)
.++.++|++||++++|.- +- -..+.++|. ..+.+++ .+|.|+++.++...
T Consensus 376 ~v~~~~~~~eai~~~n~~-~~gl~a~v~s~d~~~~~~~~~~l-~~g~v~iN~~~~~~ 430 (462)
T PF00171_consen 376 PVVPYDDLDEAIALANDS-EYGLTASVFSRDESRAERLARRL-EAGRVWINDPPTGD 430 (462)
T ss_dssp EEEEESSHHHHHHHHHHS-SEESEEEEECSBHHHHHHHHHHS-TSSEEEESSSSTGG
T ss_pred eecccccchhhhhccccc-CCCceeEEecccccccccccccc-cccceeecCCcccc
Confidence 456688999999999983 33 345667774 4667777 89999998875443
No 106
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=65.36 E-value=41 Score=31.95 Aligned_cols=46 Identities=15% Similarity=0.197 Sum_probs=34.5
Q ss_pred eEEEeC--CHHHHHHHHhhhcCcce--eecccChH---HHHhccchhcccccCCC
Q 046320 95 FMVFAR--EIMRAITFSNLYAPEHL--IVSAKDTE---KWESIIENAGSMLFGEW 142 (198)
Q Consensus 95 ~iv~v~--~l~eai~~~N~~APEHL--~l~~~d~~---~~l~~I~nAGsiFlG~~ 142 (198)
.++.++ |++||++++|.. |-.| .+.++|.. .+.+++ .+|.++++..
T Consensus 406 ~v~~~~d~~~~eai~~~n~~-~~gL~~~v~t~d~~~~~~~~~~l-~~g~v~iN~~ 458 (500)
T cd07083 406 SVIRYKDDDFAEALEVANST-PYGLTGGVYSRKREHLEEARREF-HVGNLYINRK 458 (500)
T ss_pred EEEEeCCCCHHHHHHHHhCC-CCCceEEEEeCCHHHHHHHHHhC-CeeEEEECCC
Confidence 455688 999999999985 4454 67787764 455566 6899999965
No 107
>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed
Probab=65.22 E-value=5.3 Score=38.27 Aligned_cols=47 Identities=21% Similarity=0.096 Sum_probs=35.3
Q ss_pred eEEEeCCHHHHHHHHhhhcCcc--eeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPEH--LIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEH--L~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|++||++++|.. +-. ..|.++|.. .+.++++ +|.|++...+
T Consensus 400 ~v~~~~~~deai~~~N~~-~~gLsa~V~t~d~~~a~~~~~~l~-~G~v~IN~~~ 451 (524)
T PRK09407 400 SVYPVADVDEAVERANDT-PYGLNASVWTGDTARGRAIAARIR-AGTVNVNEGY 451 (524)
T ss_pred EEEeeCCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHhCC-cceEEECCCC
Confidence 466688999999999974 343 477888875 5666664 6999999743
No 108
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=63.66 E-value=6 Score=37.07 Aligned_cols=49 Identities=14% Similarity=0.038 Sum_probs=36.8
Q ss_pred eEEEeCCHHHHHHHHhhhcCc-ceeecccCh---HHHHhccchhcccccCCCCc
Q 046320 95 FMVFAREIMRAITFSNLYAPE-HLIVSAKDT---EKWESIIENAGSMLFGEWTP 144 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APE-HL~l~~~d~---~~~l~~I~nAGsiFlG~~tp 144 (198)
.++.++|++||++++|..--= -..|.++|. ..+++++ .+|.|+++..+.
T Consensus 386 ~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l-~~G~v~iN~~~~ 438 (478)
T cd07131 386 ALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDL-EAGITYVNAPTI 438 (478)
T ss_pred EEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhc-CccEEEECCCCC
Confidence 456689999999999985432 356778886 4577777 599999997654
No 109
>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like. Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.
Probab=63.04 E-value=6.4 Score=36.70 Aligned_cols=47 Identities=15% Similarity=0.203 Sum_probs=34.2
Q ss_pred eEEEeCCHHHHHHHHhhhcCcc--eeecccChHH---HHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPEH--LIVSAKDTEK---WESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEH--L~l~~~d~~~---~l~~I~nAGsiFlG~~t 143 (198)
.++.++|.+|+++++|..- -. -.|.++|... +..++ .+|.|+++..+
T Consensus 344 ~v~~~~~~~eai~~~n~~~-~gl~a~v~t~d~~~~~~~~~~l-~~g~v~iN~~~ 395 (433)
T cd07134 344 PIITYEDLDEVIEYINAKP-KPLALYVFSKDKANVNKVLART-SSGGVVVNDVV 395 (433)
T ss_pred EEEEeCCHHHHHHHHhCCC-CCcEEEEECCCHHHHHHHHHhC-CcceEEECCcc
Confidence 4666899999999999853 33 4567778753 44555 47999999754
No 110
>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.
Probab=62.95 E-value=11 Score=35.56 Aligned_cols=51 Identities=6% Similarity=-0.003 Sum_probs=38.9
Q ss_pred eEEEeCCHHHHHHHHhhh-----cCcceeecccC------hHHHHhccchhcccccCCCCccc
Q 046320 95 FMVFAREIMRAITFSNLY-----APEHLIVSAKD------TEKWESIIENAGSMLFGEWTPES 146 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~-----APEHL~l~~~d------~~~~l~~I~nAGsiFlG~~tp~a 146 (198)
.++.++|+|||++++|.. -.-...|.++| ...+.+++ .+|.|++...++..
T Consensus 334 ~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~a~~l-~~G~V~iN~~~~~~ 395 (439)
T cd07081 334 AMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQFANAM-KTSRFVKNGPCSQG 395 (439)
T ss_pred EEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHHHhhC-CceEEEEeCCcccc
Confidence 456689999999999975 34467889999 45666676 68999998765443
No 111
>PLN02174 aldehyde dehydrogenase family 3 member H1
Probab=62.10 E-value=5.2 Score=38.41 Aligned_cols=69 Identities=12% Similarity=0.198 Sum_probs=46.9
Q ss_pred eEEEeCCHHHHHHHHhhh-cCcceeecccChHH---HHhccchhcccccCCCCc-----c-c---------cccccCCcc
Q 046320 95 FMVFAREIMRAITFSNLY-APEHLIVSAKDTEK---WESIIENAGSMLFGEWTP-----E-S---------ARMYGGVSL 155 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~-APEHL~l~~~d~~~---~l~~I~nAGsiFlG~~tp-----~-a---------AR~~sgLsv 155 (198)
.|+.++|.+||++++|.- -+=-..+.++|... +.+++ ++|.|++..++. . + .|+.|.-++
T Consensus 354 ~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l-~aG~v~IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl 432 (484)
T PLN02174 354 PILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATV-SAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSF 432 (484)
T ss_pred EEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcC-CcceEEECCCcCCCCCCCCCCCCcCccccCccchHHHH
Confidence 466688999999999985 12244677788754 67777 489999986532 2 1 555555566
Q ss_pred ccccccchH
Q 046320 156 DSFLKYVTV 164 (198)
Q Consensus 156 ~~FlK~~s~ 164 (198)
++|.+.-++
T Consensus 433 ~~ft~~K~v 441 (484)
T PLN02174 433 DAFSHKKAV 441 (484)
T ss_pred HHhcceEEE
Confidence 677665444
No 112
>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like. Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.
Probab=61.47 E-value=6.1 Score=37.12 Aligned_cols=50 Identities=16% Similarity=0.197 Sum_probs=35.5
Q ss_pred eEEEeCCHHHHHHHHhhhc-CcceeecccChH---HHHhccchhcccccCCCCcc
Q 046320 95 FMVFAREIMRAITFSNLYA-PEHLIVSAKDTE---KWESIIENAGSMLFGEWTPE 145 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~A-PEHL~l~~~d~~---~~l~~I~nAGsiFlG~~tp~ 145 (198)
.++.++|.+||++++|..- +--..|.++|.. .+..++ .+|.|++..++..
T Consensus 368 ~v~~~~~~deai~~~n~~~~gLs~~ift~d~~~a~~~~~~l-~~G~v~iN~~~~~ 421 (455)
T cd07120 368 TLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAI-RAGTVWINDWNKL 421 (455)
T ss_pred EEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhc-CcceEEECCCCCC
Confidence 3555789999999999741 223677888874 455566 4899999976543
No 113
>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like. NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.
Probab=61.12 E-value=7.6 Score=36.13 Aligned_cols=47 Identities=13% Similarity=0.029 Sum_probs=34.3
Q ss_pred eEEEeCCHHHHHHHHhhhcCc--ceeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPE--HLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APE--HL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|++||++++|.. |- -..|.++|.. .+.+++ ++|.+++...+
T Consensus 369 ~v~~~~~~~eai~~~n~~-~~gLs~~vft~d~~~a~~~~~~l-~~g~v~iN~~~ 420 (457)
T cd07108 369 CAIPWKDEDEVIAMANDS-HYGLAAYVWTRDLGRALRAAHAL-EAGWVQVNQGG 420 (457)
T ss_pred EeecCCCHHHHHHHHhCC-CcCceeEEEcCCHHHHHHHHHhc-CcceEEECCCC
Confidence 345578999999999985 33 3567777775 456666 58999998654
No 114
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=59.78 E-value=7.4 Score=36.47 Aligned_cols=47 Identities=13% Similarity=0.065 Sum_probs=34.9
Q ss_pred eEEEeCCHHHHHHHHhhhcCcc--eeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPEH--LIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEH--L~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|.+||++++|.- |-. ..|.+.|.. .+.++++ +|.|++...+
T Consensus 375 ~v~~~~~~~eai~~~n~~-~~gL~~~i~t~d~~~~~~~~~~l~-~g~v~iN~~~ 426 (462)
T cd07112 375 SVITFDSEEEAVALANDS-VYGLAASVWTSDLSRAHRVARRLR-AGTVWVNCFD 426 (462)
T ss_pred EEEEeCCHHHHHHHHhCC-CccceEEEEcCCHHHHHHHHHhcC-cceEEECCCC
Confidence 466688999999999985 433 567777764 4666775 8999999754
No 115
>KOG0447 consensus Dynamin-like GTP binding protein [General function prediction only]
Probab=58.06 E-value=26 Score=35.68 Aligned_cols=73 Identities=18% Similarity=0.285 Sum_probs=46.1
Q ss_pred EEEEeCCCCCHHH-HHHHHhhccCCC-CceEEEecCchHhHHH-------HHHHHHHHHhhCC--ceEEEeC---CHHHH
Q 046320 40 VLVIADRYPSPLH-VAADLLSQRGPD-SQGVLVIVGDGVDIKA-------IEEEIRMQCQSLP--NFMVFAR---EIMRA 105 (198)
Q Consensus 40 vlViAD~tAnp~~-vAaDLLaQHdp~-a~avLvt~~~~l~~~~-------V~~~i~~~l~~l~--g~iv~v~---~l~ea 105 (198)
++-|-|++.|++. ...||.+|-||. -+.|+|.|--+++ ++ +++-++..|=-+. |+.-+|. +-.+.
T Consensus 453 ILCIQDGSVDAERSnVTDLVsq~DP~GrRTIfVLTKVDlA-EknlA~PdRI~kIleGKLFPMKALGYfaVVTGrGnssdS 531 (980)
T KOG0447|consen 453 ILCIQDGSVDAERSIVTDLVSQMDPHGRRTIFVLTKVDLA-EKNVASPSRIQQIIEGKLFPMKALGYFAVVTGKGNSSES 531 (980)
T ss_pred EEEeccCCcchhhhhHHHHHHhcCCCCCeeEEEEeecchh-hhccCCHHHHHHHHhcCccchhhcceeEEEecCCCcchh
Confidence 5678899999876 899999996664 3688888877774 55 4444433321111 6655543 34555
Q ss_pred HHHHhhhc
Q 046320 106 ITFSNLYA 113 (198)
Q Consensus 106 i~~~N~~A 113 (198)
|+-+.+|-
T Consensus 532 IdaIR~YE 539 (980)
T KOG0447|consen 532 IEAIREYE 539 (980)
T ss_pred HHHHHHHH
Confidence 55555553
No 116
>PLN02418 delta-1-pyrroline-5-carboxylate synthase
Probab=56.93 E-value=8.9 Score=38.62 Aligned_cols=48 Identities=13% Similarity=0.200 Sum_probs=37.2
Q ss_pred EEEeCCHHHHHHHHhhhcCcc-eeecccChH---HHHhccchhcccccCCCCc
Q 046320 96 MVFAREIMRAITFSNLYAPEH-LIVSAKDTE---KWESIIENAGSMLFGEWTP 144 (198)
Q Consensus 96 iv~v~~l~eai~~~N~~APEH-L~l~~~d~~---~~l~~I~nAGsiFlG~~tp 144 (198)
+..++|++|||+++|..--=| -.|.++|.. .+.++|+ +|.||+..++.
T Consensus 605 i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~a~~l~-aG~V~IN~~~~ 656 (718)
T PLN02418 605 VEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIFLRQVD-SAAVFHNASTR 656 (718)
T ss_pred EEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHHHHhCC-eeEEEEeCCCC
Confidence 335899999999999987665 558888875 4666776 89999997543
No 117
>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating).
Probab=56.46 E-value=21 Score=34.18 Aligned_cols=49 Identities=12% Similarity=0.080 Sum_probs=36.0
Q ss_pred eEEEeCCHHHHHHHHhhh---cCcc--eeecccChH---HHHhccchhcccccCCCCc
Q 046320 95 FMVFAREIMRAITFSNLY---APEH--LIVSAKDTE---KWESIIENAGSMLFGEWTP 144 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~---APEH--L~l~~~d~~---~~l~~I~nAGsiFlG~~tp 144 (198)
.++.++|++||++++|.. -+-+ -.|.++|.. ++..+| .+|.||+...+.
T Consensus 344 ~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~f~~~i-~ag~V~VN~~~~ 400 (488)
T TIGR02518 344 AFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVREFALKK-PVSRMLVNTGGS 400 (488)
T ss_pred EEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHHHHHhC-CeeEEEEcCCCc
Confidence 466689999999999983 3444 467888874 455565 589999996543
No 118
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=56.25 E-value=9.4 Score=36.36 Aligned_cols=48 Identities=15% Similarity=0.081 Sum_probs=35.7
Q ss_pred eEEEeCCHHHHHHHHhhhc-CcceeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYA-PEHLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~A-PEHL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|++||++++|..- +=-..+.++|.. .+.++++ +|.++++..+
T Consensus 420 ~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~-~G~v~vN~~~ 471 (512)
T cd07124 420 AVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFE-VGNLYANRKI 471 (512)
T ss_pred EEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCC-cceEEECCCC
Confidence 4666899999999999842 223678888875 4666775 7999999653
No 119
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=53.65 E-value=49 Score=26.99 Aligned_cols=84 Identities=17% Similarity=0.187 Sum_probs=60.6
Q ss_pred CHHHHHHHHhhc-cCCCCceEEEecCchHhHHHHHHHHHHHHhhCC------ceEEEeCCHHHHHHHHhhhcCcceeecc
Q 046320 49 SPLHVAADLLSQ-RGPDSQGVLVIVGDGVDIKAIEEEIRMQCQSLP------NFMVFAREIMRAITFSNLYAPEHLIVSA 121 (198)
Q Consensus 49 np~~vAaDLLaQ-Hdp~a~avLvt~~~~l~~~~V~~~i~~~l~~l~------g~iv~v~~l~eai~~~N~~APEHL~l~~ 121 (198)
++..+.-+|+.+ ...+-+.+|+-.+++.+ ++..+.+.++-+.+. |.. --.+.++.++.+|.--|..|-+..
T Consensus 32 ~g~dl~~~l~~~~~~~~~~ifllG~~~~~~-~~~~~~l~~~yP~l~ivg~~~g~f-~~~~~~~i~~~I~~~~pdiv~vgl 109 (172)
T PF03808_consen 32 TGSDLFPDLLRRAEQRGKRIFLLGGSEEVL-EKAAANLRRRYPGLRIVGYHHGYF-DEEEEEAIINRINASGPDIVFVGL 109 (172)
T ss_pred CHHHHHHHHHHHHHHcCCeEEEEeCCHHHH-HHHHHHHHHHCCCeEEEEecCCCC-ChhhHHHHHHHHHHcCCCEEEEEC
Confidence 444567788888 55566899999998885 888888887665543 211 112577888899999999999999
Q ss_pred cCh--HHHHhccchh
Q 046320 122 KDT--EKWESIIENA 134 (198)
Q Consensus 122 ~d~--~~~l~~I~nA 134 (198)
-.| +.|+.+.++.
T Consensus 110 G~PkQE~~~~~~~~~ 124 (172)
T PF03808_consen 110 GAPKQERWIARHRQR 124 (172)
T ss_pred CCCHHHHHHHHHHHH
Confidence 988 6666665543
No 120
>PF08442 ATP-grasp_2: ATP-grasp domain; InterPro: IPR013650 The ATP-grasp superfamily currently includes 17 groups of enzymes, catalyzing ATP-dependent ligation of a carboxylate containing molecule to an amino or thiol group-containing molecule []. They contribute predominantly to macromolecular synthesis. ATP-hydrolysis is used to activate a substrate. For example, DD-ligase transfers phosphate from ATP to D-alanine on the first step of catalysis. On the second step the resulting acylphosphate is attacked by a second D-alanine to produce a DD dipeptide following phosphate elimination []. The ATP-grasp domain contains three conserved motifs, corresponding to the phosphate binding loop and the Mg(2+) binding site []. The fold is characterised by two alpha-beta subdomains that grasp the ATP molecule between them. Each subdomain provides a variable loop that forms a part of the active site, completed by region of other domains not conserved between the various ATP-grasp enzymes []. The ATP-grasp domain represented by this entry is found primarily in succinyl-CoA synthetases (6.2.1.5 from EC).; PDB: 3PFF_A 3MWD_A 3MWE_A 1CQI_E 1SCU_B 2NU9_G 2NU6_E 1CQJ_E 2NU7_B 1JLL_E ....
Probab=51.29 E-value=44 Score=28.56 Aligned_cols=102 Identities=16% Similarity=0.124 Sum_probs=59.0
Q ss_pred HHHHHHHhhccCCCCceEEEecCchHhHHHHHHHHHHHHhhCC---------------ceEEEeCCHHHHHHHHhhhcCc
Q 046320 51 LHVAADLLSQRGPDSQGVLVIVGDGVDIKAIEEEIRMQCQSLP---------------NFMVFAREIMRAITFSNLYAPE 115 (198)
Q Consensus 51 ~~vAaDLLaQHdp~a~avLvt~~~~l~~~~V~~~i~~~l~~l~---------------g~iv~v~~l~eai~~~N~~APE 115 (198)
+|-|-+||.+||-.-+--.++++.+-+ .+...++ ..-+ |+|-+++|.+|+.+++.++--.
T Consensus 4 EyqaK~ll~~~gi~vp~g~~a~s~eea-~~~~~~l----~~~~~VvKaQvl~GgRGK~GgVk~~~s~~ea~~~a~~mlg~ 78 (202)
T PF08442_consen 4 EYQAKELLRKYGIPVPRGVVATSPEEA-REAAKEL----GGKPLVVKAQVLAGGRGKAGGVKIAKSPEEAKEAAKEMLGK 78 (202)
T ss_dssp HHHHHHHHHCTT----SEEEESSHHHH-HHHHHHH----TTSSEEEEE-SSSSTTTTTTCEEEESSHHHHHHHHHTTTTS
T ss_pred HHHHHHHHHHcCCCCCCeeecCCHHHH-HHHHHHh----CCCcEEEEEeEeecCcccCCceeecCCHHHHHHHHHHHhCC
Confidence 677889999977665444444444332 4444433 2222 8899999999999999998877
Q ss_pred cee--------ecccChHHHHhccchhcccccC------CCCccc-cccccCCccccc
Q 046320 116 HLI--------VSAKDTEKWESIIENAGSMLFG------EWTPES-ARMYGGVSLDSF 158 (198)
Q Consensus 116 HL~--------l~~~d~~~~l~~I~nAGsiFlG------~~tp~a-AR~~sgLsv~~F 158 (198)
+|. ..+.. --+-+.+.+....|++ ...|+. +-..||..+++.
T Consensus 79 ~l~T~Qtg~~G~~v~~-vlvee~v~~~~E~Ylsi~~DR~~~~p~ii~S~~GGvdIEev 135 (202)
T PF08442_consen 79 TLKTKQTGPKGEKVNK-VLVEEFVDIKREYYLSITLDRESRGPVIIASKEGGVDIEEV 135 (202)
T ss_dssp EEE-TTSTTTEEEE---EEEEE---CCEEEEEEEEEETTTTEEEEEEESSTSSTHHHH
T ss_pred ceEeeecCCCCCEeeE-EEEEecCccCceEEEEEEeccCCCceEEEEeccCCccHHHH
Confidence 765 11110 1122344455566655 334544 777889888874
No 121
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=51.14 E-value=14 Score=37.07 Aligned_cols=48 Identities=8% Similarity=0.122 Sum_probs=36.4
Q ss_pred eEEEeCCHHHHHHHHhhhc-CcceeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYA-PEHLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~A-PEHL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|++||++++|..- |--..+.++|.. .++.+++ +|.+++..++
T Consensus 598 ~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~~~i~-sG~V~vN~~~ 649 (715)
T TIGR01092 598 TVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFLQHVD-SAAVFHNAST 649 (715)
T ss_pred EEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCC-eeEEEEeCCC
Confidence 4666899999999999973 345788888875 4555654 8999998654
No 122
>PRK09756 PTS system N-acetylgalactosamine-specific transporter subunit IIB; Provisional
Probab=51.09 E-value=59 Score=26.77 Aligned_cols=79 Identities=9% Similarity=0.081 Sum_probs=49.6
Q ss_pred CCceEEEecCchHhHHHHHHHHHHHHhhCC-ceEEEeCCHHHHHHHHhh-hcCcceeecccChHHHHhccc---hhcccc
Q 046320 64 DSQGVLVIVGDGVDIKAIEEEIRMQCQSLP-NFMVFAREIMRAITFSNL-YAPEHLIVSAKDTEKWESIIE---NAGSML 138 (198)
Q Consensus 64 ~a~avLvt~~~~l~~~~V~~~i~~~l~~l~-g~iv~v~~l~eai~~~N~-~APEHL~l~~~d~~~~l~~I~---nAGsiF 138 (198)
.+..|+|.+|+-- .+..++.+.+... .| |.-+.+-|.++|++..|. +..+..-+.+++|...++-++ .--+|=
T Consensus 29 ~~~~IiVvdD~vA-~D~~~k~~lkma~-~P~gvk~~i~sv~~a~~~l~~~~~~~~vlvl~~~~~da~~l~~~g~~i~~iN 106 (158)
T PRK09756 29 GANLLVVVDDVVA-NDDIQQKLMGITA-ETYGFGIRFFTIEKTINVIGKAAPHQKIFLICRTPQTVRKLVEGGIDLKDVN 106 (158)
T ss_pred CCCEEEEEcchhc-CCHHHHHHHHhcC-CCCCCEEEEEEHHHHHHHHHhccCCceEEEEECCHHHHHHHHHcCCCCCEEE
Confidence 3456666666543 3666666655432 24 556667788888887774 444667888888877776665 234666
Q ss_pred cCCCCc
Q 046320 139 FGEWTP 144 (198)
Q Consensus 139 lG~~tp 144 (198)
+|....
T Consensus 107 iG~m~~ 112 (158)
T PRK09756 107 VGNMHF 112 (158)
T ss_pred ECCCcC
Confidence 776533
No 123
>TIGR03374 ABALDH 1-pyrroline dehydrogenase. Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.
Probab=50.86 E-value=12 Score=35.28 Aligned_cols=48 Identities=10% Similarity=0.025 Sum_probs=34.3
Q ss_pred eEEEeCCHHHHHHHHhhhcCcc--eeecccChH---HHHhccchhcccccCCCCc
Q 046320 95 FMVFAREIMRAITFSNLYAPEH--LIVSAKDTE---KWESIIENAGSMLFGEWTP 144 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEH--L~l~~~d~~---~~l~~I~nAGsiFlG~~tp 144 (198)
.++.++|.+||++++|.- |-- ..|.++|.. ++.++++ +|.+++..+..
T Consensus 384 ~v~~~~~~~eai~~an~~-~~gL~a~vft~d~~~~~~~~~~l~-~G~v~iN~~~~ 436 (472)
T TIGR03374 384 SITSFDDEEQVVNWANDS-QYGLASSVWTKDVGRAHRLSARLQ-YGCTWVNTHFM 436 (472)
T ss_pred EEEEECCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHhCC-cceEEECCCCC
Confidence 466689999999999973 333 467778874 4445554 59999997543
No 124
>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like. ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.
Probab=50.57 E-value=17 Score=34.03 Aligned_cols=48 Identities=8% Similarity=-0.035 Sum_probs=36.7
Q ss_pred eEEEeCC--HHHHHHHHhhh-cCcceeecccChH---HHHhccchhcccccCCC
Q 046320 95 FMVFARE--IMRAITFSNLY-APEHLIVSAKDTE---KWESIIENAGSMLFGEW 142 (198)
Q Consensus 95 ~iv~v~~--l~eai~~~N~~-APEHL~l~~~d~~---~~l~~I~nAGsiFlG~~ 142 (198)
.|+.++| ++|+++++|.- -+=...|.++|.. ++.+++.++|.++++.+
T Consensus 348 ~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~~G~v~iN~~ 401 (442)
T cd07084 348 IVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNLWVAGRTYAILR 401 (442)
T ss_pred EEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHHHHHhcCeEEECCC
Confidence 4566788 99999999963 2336778888875 46667778899999966
No 125
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=50.10 E-value=40 Score=31.72 Aligned_cols=49 Identities=16% Similarity=0.166 Sum_probs=37.0
Q ss_pred eEEEeCCHHHHHHHHhhhc-CcceeecccChH---HHHhccchhcccccCCCCc
Q 046320 95 FMVFAREIMRAITFSNLYA-PEHLIVSAKDTE---KWESIIENAGSMLFGEWTP 144 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~A-PEHL~l~~~d~~---~~l~~I~nAGsiFlG~~tp 144 (198)
.++-++|++||++++|.-- +-...|.++|.. .++++++ +|.|++...++
T Consensus 386 ~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~-~G~v~iN~~~~ 438 (478)
T cd07085 386 SIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARKFQREVD-AGMVGINVPIP 438 (478)
T ss_pred EEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCC-cceEEEcCCCC
Confidence 4566889999999999732 235788999975 4666664 99999997643
No 126
>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.
Probab=49.72 E-value=12 Score=35.83 Aligned_cols=48 Identities=10% Similarity=0.179 Sum_probs=34.9
Q ss_pred EEEeC--CHHHHHHHHhhhcC--cceeecccChH---HHHhccc-hhcccccCCCC
Q 046320 96 MVFAR--EIMRAITFSNLYAP--EHLIVSAKDTE---KWESIIE-NAGSMLFGEWT 143 (198)
Q Consensus 96 iv~v~--~l~eai~~~N~~AP--EHL~l~~~d~~---~~l~~I~-nAGsiFlG~~t 143 (198)
|+-++ |++|+++++|.-.| =-..+.++|.. .++++++ ++|.++++...
T Consensus 424 V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~ 479 (522)
T cd07123 424 VYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKP 479 (522)
T ss_pred EEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCC
Confidence 33355 58999999998544 45578888874 5666664 79999999643
No 127
>PTZ00381 aldehyde dehydrogenase family protein; Provisional
Probab=49.01 E-value=13 Score=35.60 Aligned_cols=68 Identities=16% Similarity=0.197 Sum_probs=46.1
Q ss_pred eEEEeCCHHHHHHHHhhh-cCcceeecccChH---HHHhccchhcccccCCCC-----ccc----------cccccCCcc
Q 046320 95 FMVFAREIMRAITFSNLY-APEHLIVSAKDTE---KWESIIENAGSMLFGEWT-----PES----------ARMYGGVSL 155 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~-APEHL~l~~~d~~---~~l~~I~nAGsiFlG~~t-----p~a----------AR~~sgLsv 155 (198)
.++.++|++||++++|.. -|=-+.+.++|.. .+++++ ++|.+++.... |.. .|+.|.-+.
T Consensus 348 ~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~-~sG~v~IN~~~~~~~~~~~PFGG~g~SG~G~~~G~~g~ 426 (493)
T PTZ00381 348 PILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENT-SSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGF 426 (493)
T ss_pred EEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhC-CcceEEECCccccccCCCCCCCCcCcccccccchHHHH
Confidence 456689999999999984 2334577888874 455554 47999998643 111 666666667
Q ss_pred ccccccch
Q 046320 156 DSFLKYVT 163 (198)
Q Consensus 156 ~~FlK~~s 163 (198)
++|.+.-+
T Consensus 427 ~~fs~~k~ 434 (493)
T PTZ00381 427 DTFSHPKP 434 (493)
T ss_pred HhccceeE
Confidence 77776544
No 128
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=47.64 E-value=13 Score=35.46 Aligned_cols=47 Identities=19% Similarity=0.273 Sum_probs=35.4
Q ss_pred eEEEeC--CHHHHHHHHhhhcCcc--eeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAR--EIMRAITFSNLYAPEH--LIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~--~l~eai~~~N~~APEH--L~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++ |++||++++|.. |-. ..|.++|.. .+..+++ +|.|+++..+
T Consensus 414 ~v~~~~~~~~deAi~~~n~~-~~gLta~Vft~d~~~~~~~~~~l~-~G~V~IN~~~ 467 (518)
T cd07125 414 HVIRFKAEDLDEAIEDINAT-GYGLTLGIHSRDEREIEYWRERVE-AGNLYINRNI 467 (518)
T ss_pred EEEEeCCCCHHHHHHHHhCC-CCCceEEEEeCCHHHHHHHHHhCC-cCeEEECCCC
Confidence 466688 999999999987 333 567777775 4566664 8999999754
No 129
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=46.97 E-value=49 Score=27.64 Aligned_cols=85 Identities=12% Similarity=0.080 Sum_probs=58.1
Q ss_pred HHHHHHhhc-cCCCCceEEEecCchHhHHHHHHHHHHHHhhCCceEEEe------C-CHHHHHHHHhhhcCcceeecccC
Q 046320 52 HVAADLLSQ-RGPDSQGVLVIVGDGVDIKAIEEEIRMQCQSLPNFMVFA------R-EIMRAITFSNLYAPEHLIVSAKD 123 (198)
Q Consensus 52 ~vAaDLLaQ-Hdp~a~avLvt~~~~l~~~~V~~~i~~~l~~l~g~iv~v------~-~l~eai~~~N~~APEHL~l~~~d 123 (198)
.+.-|||++ -...-+.+|+-..++.+ ++..+.+.++-+.+. ++. + +.++.++.+|+..|.-|-+..-.
T Consensus 35 dl~~~l~~~~~~~~~~vfllG~~~~v~-~~~~~~l~~~yP~l~---i~g~~g~f~~~~~~~i~~~I~~s~~dil~VglG~ 110 (177)
T TIGR00696 35 DLMEELCQRAGKEKLPIFLYGGKPDVL-QQLKVKLIKEYPKLK---IVGAFGPLEPEERKAALAKIARSGAGIVFVGLGC 110 (177)
T ss_pred HHHHHHHHHHHHcCCeEEEECCCHHHH-HHHHHHHHHHCCCCE---EEEECCCCChHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 456788887 22335788888888884 888887777654432 221 1 33566899999999999999888
Q ss_pred h--HHHHhccchh--cccccC
Q 046320 124 T--EKWESIIENA--GSMLFG 140 (198)
Q Consensus 124 ~--~~~l~~I~nA--GsiFlG 140 (198)
| |.|+.+.++. ..+++|
T Consensus 111 PkQE~~~~~~~~~~~~~v~~g 131 (177)
T TIGR00696 111 PKQEIWMRNHRHLKPDAVMIG 131 (177)
T ss_pred cHhHHHHHHhHHhCCCcEEEE
Confidence 8 5677766443 345655
No 130
>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1. This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.
Probab=44.69 E-value=15 Score=35.41 Aligned_cols=49 Identities=12% Similarity=0.081 Sum_probs=32.3
Q ss_pred eEEEeCC--HHHHHHHHhhhcCc--ceeecccChHH---HHhccc-hhcccccCCCC
Q 046320 95 FMVFARE--IMRAITFSNLYAPE--HLIVSAKDTEK---WESIIE-NAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~--l~eai~~~N~~APE--HL~l~~~d~~~---~l~~I~-nAGsiFlG~~t 143 (198)
.++.++| ++||++++|.-.|- =..|.++|... +.++++ .+|.++++..+
T Consensus 424 ~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~ 480 (533)
T TIGR01236 424 TVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKP 480 (533)
T ss_pred EEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCC
Confidence 3555677 69999999322233 35677788754 444554 39999999653
No 131
>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase. Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.
Probab=42.50 E-value=36 Score=32.14 Aligned_cols=47 Identities=17% Similarity=0.079 Sum_probs=35.4
Q ss_pred eEEEeCCHHHHHHHHhhhcCcc--eeecccChH---HHHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLYAPEH--LIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEH--L~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
.++.++|++||++++|.. +-. ..+.++|.. .++.+++ +|.+++....
T Consensus 380 ~v~~~~~~~eai~~~n~~-~~gL~~~v~t~d~~~a~~~~~~l~-aG~v~iN~~~ 431 (484)
T TIGR03240 380 QVIRYDDFDEAIAIANNT-RFGLSAGLLSDDRELYDRFLLEIR-AGIVNWNKPL 431 (484)
T ss_pred EEEEeCCHHHHHHHHhCC-CCCceEEEEcCCHHHHHHHHHhCC-cceEEEECCC
Confidence 455678999999999985 334 478888885 4666774 9999988643
No 132
>TIGR00854 pts-sorbose PTS system, mannose/fructose/sorbose family, IIB component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Man family is unique in several respects among PTS permease families.It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the IIB components of this family of PTS transporters.
Probab=41.19 E-value=1e+02 Score=25.09 Aligned_cols=77 Identities=12% Similarity=0.198 Sum_probs=47.9
Q ss_pred CceEEEecCchHhHHHHHHHHHHHHhhCC-ceEEEeCCHHHHHHHHhh--hcCcceeecccChHHHHhccc---hhcccc
Q 046320 65 SQGVLVIVGDGVDIKAIEEEIRMQCQSLP-NFMVFAREIMRAITFSNL--YAPEHLIVSAKDTEKWESIIE---NAGSML 138 (198)
Q Consensus 65 a~avLvt~~~~l~~~~V~~~i~~~l~~l~-g~iv~v~~l~eai~~~N~--~APEHL~l~~~d~~~~l~~I~---nAGsiF 138 (198)
+..|+|.+|+-- .+..++.+.+.. .| |.-+.+-|.++|++..|. +..+..-+.+++|...++-++ ..-+|=
T Consensus 26 ~~~IiVvdD~~A-~D~~~k~~lkma--~P~gvk~~i~sve~a~~~l~~~~~~~~~v~vl~k~~~da~~l~~~g~~i~~in 102 (151)
T TIGR00854 26 ANRIIVVNDDVA-NDEVRQTLMGIV--APTGFKVRFVSLEKTINVIHKPAYHDQTIFLLFRNPQDVLTLVEGGVPIKTVN 102 (151)
T ss_pred CCEEEEEccccc-CCHHHHHHHHhh--CCCCCEEEEEEHHHHHHHHhCcCCCCceEEEEECCHHHHHHHHHcCCCCCEEE
Confidence 446666655533 255555555432 24 666667788888888875 555678888888877777666 133566
Q ss_pred cCCCCc
Q 046320 139 FGEWTP 144 (198)
Q Consensus 139 lG~~tp 144 (198)
+|....
T Consensus 103 iG~~~~ 108 (151)
T TIGR00854 103 VGGMHF 108 (151)
T ss_pred ECCccc
Confidence 665533
No 133
>PRK15398 aldehyde dehydrogenase EutE; Provisional
Probab=41.14 E-value=42 Score=31.96 Aligned_cols=47 Identities=13% Similarity=0.204 Sum_probs=34.8
Q ss_pred EEEeCCHHHHHHHHhhh--c-CcceeecccChH---HHHhccchhcccccCCCC
Q 046320 96 MVFAREIMRAITFSNLY--A-PEHLIVSAKDTE---KWESIIENAGSMLFGEWT 143 (198)
Q Consensus 96 iv~v~~l~eai~~~N~~--A-PEHL~l~~~d~~---~~l~~I~nAGsiFlG~~t 143 (198)
++.++|++||++++|.- . |.-..|.++|.. .+.++++ +|.|++...+
T Consensus 368 V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a~~l~-~G~V~iN~~~ 420 (465)
T PRK15398 368 VVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMARAIQ-TSIFVKNGPS 420 (465)
T ss_pred EEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHHHHhCC-ceEEEECCCC
Confidence 45578999999999764 2 334688888864 5566665 7999999543
No 134
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=39.95 E-value=64 Score=25.62 Aligned_cols=81 Identities=21% Similarity=0.271 Sum_probs=39.2
Q ss_pred EecCCcHHHHHHHHHhhcccccccccccCccCCcceEEEEeCCCCCHHHHHHHHhhc------c--CCCCceEEEecCch
Q 046320 4 IFGPGNKYVTAAKMILQLQFFPAILKKSHDKVQTAQVLVIADRYPSPLHVAADLLSQ------R--GPDSQGVLVIVGDG 75 (198)
Q Consensus 4 IvGPGN~yV~~AK~~v~~~~~~~~V~~gID~AGPSEvlViAD~tAnp~~vAaDLLaQ------H--dp~a~avLvt~~~~ 75 (198)
|.|+||.=.+.|+.+.... . +|.-+...+..-..-|+.++.. + -.++-.++||.+++
T Consensus 15 iIGaGrVG~~La~aL~~ag-----~----------~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd 79 (127)
T PF10727_consen 15 IIGAGRVGTALARALARAG-----H----------EVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD 79 (127)
T ss_dssp EECTSCCCCHHHHHHHHTT-----S----------EEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC
T ss_pred EECCCHHHHHHHHHHHHCC-----C----------eEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH
Confidence 7899999999999987421 2 2333333322111122222211 1 23566888887776
Q ss_pred HhHHHHHHHHHHHHhhCCceEEEeC
Q 046320 76 VDIKAIEEEIRMQCQSLPNFMVFAR 100 (198)
Q Consensus 76 l~~~~V~~~i~~~l~~l~g~iv~v~ 100 (198)
. +..|-++|...-...||.+|+-.
T Consensus 80 a-I~~va~~La~~~~~~~g~iVvHt 103 (127)
T PF10727_consen 80 A-IAEVAEQLAQYGAWRPGQIVVHT 103 (127)
T ss_dssp H-HHHHHHHHHCC--S-TT-EEEES
T ss_pred H-HHHHHHHHHHhccCCCCcEEEEC
Confidence 5 36666666544233356666533
No 135
>PRK12470 amidase; Provisional
Probab=38.93 E-value=39 Score=31.89 Aligned_cols=96 Identities=13% Similarity=0.097 Sum_probs=51.3
Q ss_pred eCCCCCHHHHHHHHhhc---cCCCCceEEEecCchHhHHHHHHHHHHHHhh---CC--ceEEEeCCHHHHHHHHhhhcCc
Q 046320 44 ADRYPSPLHVAADLLSQ---RGPDSQGVLVIVGDGVDIKAIEEEIRMQCQS---LP--NFMVFAREIMRAITFSNLYAPE 115 (198)
Q Consensus 44 AD~tAnp~~vAaDLLaQ---Hdp~a~avLvt~~~~l~~~~V~~~i~~~l~~---l~--g~iv~v~~l~eai~~~N~~APE 115 (198)
+++...|..+.-..|.+ ++|.-.++.-. +.+.+.++ .+++++.+.. +| |.-|.++|+-+.-.+-..+.--
T Consensus 19 ~~g~~s~~e~~~~~l~ri~~~~~~lna~~~~-~~~~a~~~-A~~~d~~~~~g~~~pL~GvPi~vKD~~~v~G~~tt~Gs~ 96 (462)
T PRK12470 19 ADGELTAPMLLEVYLQRIERLDSHLRAYRVV-LFDRARAE-AEAAQQRLDAGERLPLLGVPIAIKDDVDVAGEVTTYGSA 96 (462)
T ss_pred HcCCCCHHHHHHHHHHHHHHHCCCcCEEEEe-CHHHHHHH-HHHhHHHHhcCCCCCcCCCeEEEecCcccCCceeCCCCc
Confidence 44566777777777777 77755555433 44332122 2334433221 14 6666666643222222222211
Q ss_pred ce-eecccChHHHHhccchhcccccCCC
Q 046320 116 HL-IVSAKDTEKWESIIENAGSMLFGEW 142 (198)
Q Consensus 116 HL-~l~~~d~~~~l~~I~nAGsiFlG~~ 142 (198)
.+ .....| -.++++++.||+|.+|+-
T Consensus 97 ~~~~~~~~d-A~vV~rLr~aGaii~GKT 123 (462)
T PRK12470 97 GHGPAATSD-AEVVRRLRAAGAVIIGKT 123 (462)
T ss_pred ccCCCCCcc-HHHHHHHHHCCCeEEEEe
Confidence 11 122233 468999999999999973
No 136
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=38.66 E-value=22 Score=35.33 Aligned_cols=48 Identities=15% Similarity=0.050 Sum_probs=35.3
Q ss_pred eEEEeCCHHHHHHHHhhh-cCcceeecccChHH---HHhccchhcccccCCCC
Q 046320 95 FMVFAREIMRAITFSNLY-APEHLIVSAKDTEK---WESIIENAGSMLFGEWT 143 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~-APEHL~l~~~d~~~---~l~~I~nAGsiFlG~~t 143 (198)
.|+-++|++||++++|.- -+=-..|.++|... +.+++ .+|.|++...+
T Consensus 498 ~V~~~~~~dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l-~aG~V~IN~~~ 549 (604)
T PLN02419 498 VCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDI-EAGQIGINVPI 549 (604)
T ss_pred EEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhC-CeeeEEEcCCC
Confidence 455688999999999984 12346788888864 44555 47999999764
No 137
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=37.66 E-value=1.4e+02 Score=20.94 Aligned_cols=69 Identities=22% Similarity=0.286 Sum_probs=41.8
Q ss_pred EecCCcHHHHHHHHHhhcccccccccccCccCCcceEEEEeCCCCCH-HHHHHHHhhc--c-CC-----CCceEEEecCc
Q 046320 4 IFGPGNKYVTAAKMILQLQFFPAILKKSHDKVQTAQVLVIADRYPSP-LHVAADLLSQ--R-GP-----DSQGVLVIVGD 74 (198)
Q Consensus 4 IvGPGN~yV~~AK~~v~~~~~~~~V~~gID~AGPSEvlViAD~tAnp-~~vAaDLLaQ--H-dp-----~a~avLvt~~~ 74 (198)
|.|.||.=-+.++.++.. |+ .|.+++++.+.+.+- +..+..+-.+ + +. .+..++++..+
T Consensus 4 iIG~G~mg~al~~~l~~~---------g~---~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~advvilav~p 71 (96)
T PF03807_consen 4 IIGAGNMGSALARGLLAS---------GI---KPHEVIIVSSRSPEKAAELAKEYGVQATADDNEEAAQEADVVILAVKP 71 (96)
T ss_dssp EESTSHHHHHHHHHHHHT---------TS----GGEEEEEEESSHHHHHHHHHHCTTEEESEEHHHHHHHTSEEEE-S-G
T ss_pred EECCCHHHHHHHHHHHHC---------CC---CceeEEeeccCcHHHHHHHHHhhccccccCChHHhhccCCEEEEEECH
Confidence 569999999999998853 33 799999887543321 2223333223 2 11 25578888877
Q ss_pred hHhHHHHHHHH
Q 046320 75 GVDIKAIEEEI 85 (198)
Q Consensus 75 ~l~~~~V~~~i 85 (198)
... ..|.+++
T Consensus 72 ~~~-~~v~~~i 81 (96)
T PF03807_consen 72 QQL-PEVLSEI 81 (96)
T ss_dssp GGH-HHHHHHH
T ss_pred HHH-HHHHHHH
Confidence 774 7777776
No 138
>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair]
Probab=37.19 E-value=2e+02 Score=27.50 Aligned_cols=62 Identities=18% Similarity=0.169 Sum_probs=38.4
Q ss_pred cEEecCCcHHHHHHHHHhhcccccccccccCccCCcceEEEEeCCCCCHH----HHHHHHhhccCCCCceEEEecCc
Q 046320 2 EKIFGPGNKYVTAAKMILQLQFFPAILKKSHDKVQTAQVLVIADRYPSPL----HVAADLLSQRGPDSQGVLVIVGD 74 (198)
Q Consensus 2 DkIvGPGN~yV~~AK~~v~~~~~~~~V~~gID~AGPSEvlViAD~tAnp~----~vAaDLLaQHdp~a~avLvt~~~ 74 (198)
+.++||+|.+.-+|=+.+... +.+|.-.+.|.-++--.. ..+.--.-|++|++..+-++...
T Consensus 88 nFv~g~~N~~A~aa~~~va~~-----------~g~~~nplfi~G~~GlGKTHLl~Aign~~~~~~~~a~v~y~~se~ 153 (408)
T COG0593 88 NFVVGPSNRLAYAAAKAVAEN-----------PGGAYNPLFIYGGVGLGKTHLLQAIGNEALANGPNARVVYLTSED 153 (408)
T ss_pred heeeCCchHHHHHHHHHHHhc-----------cCCcCCcEEEECCCCCCHHHHHHHHHHHHHhhCCCceEEeccHHH
Confidence 468999999998887776431 233455555555444332 23333333489998888877554
No 139
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=36.25 E-value=2.6e+02 Score=25.40 Aligned_cols=93 Identities=17% Similarity=0.125 Sum_probs=66.5
Q ss_pred cCCcceEEEEeCCCCCHHHHHHHHhhccCCCCceEEEecCchHhHHHHHHHHHHHHhhCCceE--EE--eCCHHHHHHHH
Q 046320 34 KVQTAQVLVIADRYPSPLHVAADLLSQRGPDSQGVLVIVGDGVDIKAIEEEIRMQCQSLPNFM--VF--AREIMRAITFS 109 (198)
Q Consensus 34 ~AGPSEvlViAD~tAnp~~vAaDLLaQHdp~a~avLvt~~~~l~~~~V~~~i~~~l~~l~g~i--v~--v~~l~eai~~~ 109 (198)
.-++.=++||...+---.+-.+=-|+.|| +..++.+-|.+.+ ++..+.|.+ +.-+..+ +. ..|++....|+
T Consensus 31 ~~~~~~~~vVTGansGIG~eta~~La~~G--a~Vv~~~R~~~~~-~~~~~~i~~--~~~~~~i~~~~lDLssl~SV~~fa 105 (314)
T KOG1208|consen 31 IDLSGKVALVTGATSGIGFETARELALRG--AHVVLACRNEERG-EEAKEQIQK--GKANQKIRVIQLDLSSLKSVRKFA 105 (314)
T ss_pred ccCCCcEEEEECCCCchHHHHHHHHHhCC--CEEEEEeCCHHHH-HHHHHHHHh--cCCCCceEEEECCCCCHHHHHHHH
Confidence 55555799999998888888888888888 7899988888774 777777776 2222333 33 34899999999
Q ss_pred hhhcC--cceeecccChHHHHhccchhcccccCC
Q 046320 110 NLYAP--EHLIVSAKDTEKWESIIENAGSMLFGE 141 (198)
Q Consensus 110 N~~AP--EHL~l~~~d~~~~l~~I~nAGsiFlG~ 141 (198)
+.+-- .+|-+.+ .|||-.|...
T Consensus 106 ~~~~~~~~~ldvLI----------nNAGV~~~~~ 129 (314)
T KOG1208|consen 106 EEFKKKEGPLDVLI----------NNAGVMAPPF 129 (314)
T ss_pred HHHHhcCCCccEEE----------eCcccccCCc
Confidence 99852 2444443 3888888776
No 140
>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.
Probab=36.23 E-value=63 Score=31.78 Aligned_cols=53 Identities=13% Similarity=0.115 Sum_probs=38.6
Q ss_pred ceEEEeCCHHHHHHHHhhhc----CcceeecccChHH---HHhcc---------chhcccccCCCCccc
Q 046320 94 NFMVFAREIMRAITFSNLYA----PEHLIVSAKDTEK---WESII---------ENAGSMLFGEWTPES 146 (198)
Q Consensus 94 g~iv~v~~l~eai~~~N~~A----PEHL~l~~~d~~~---~l~~I---------~nAGsiFlG~~tp~a 146 (198)
-.|+.++|.+||++++|... +=-..|.+.|... +.+++ +.+|.||+...+|-+
T Consensus 449 l~V~~~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~~~~~ 517 (551)
T TIGR02288 449 AFVVAVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQSAAFS 517 (551)
T ss_pred EEEEEECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccCCCCC
Confidence 35677899999999999753 3335788888754 44443 357999999877776
No 141
>PF01329 Pterin_4a: Pterin 4 alpha carbinolamine dehydratase; InterPro: IPR001533 DCoH is the dimerisation cofactor of hepatocyte nuclear factor 1 (HNF-1) that functions as both a transcriptional coactivator and a pterin dehydratase []. X-ray crystallographic studies have shown that the ligand binds at four sites per tetrameric enzyme, with little apparent conformational change in the protein.; GO: 0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity, 0006729 tetrahydrobiopterin biosynthetic process; PDB: 2V6T_B 2V6U_A 2V6S_B 2EBB_A 1USM_A 1F93_B 1DCP_C 1DCH_E 3HXA_E 1DCO_C ....
Probab=34.63 E-value=68 Score=23.91 Aligned_cols=32 Identities=28% Similarity=0.317 Sum_probs=24.0
Q ss_pred HHHHHHHhhCC-----c-----eEEEeCCHHHHHHHHhhhcC
Q 046320 83 EEIRMQCQSLP-----N-----FMVFAREIMRAITFSNLYAP 114 (198)
Q Consensus 83 ~~i~~~l~~l~-----g-----~iv~v~~l~eai~~~N~~AP 114 (198)
++|..+|+.+| + .-+.++|..+|++|+|.+|.
T Consensus 8 ~ei~~~L~~l~~W~~~~~~~l~r~f~f~~f~~a~~f~~~Va~ 49 (95)
T PF01329_consen 8 EEIAEALAELPGWKLDGGGRLERTFKFKDFAEAVEFVNRVAA 49 (95)
T ss_dssp HHHHHHHHTSTTSEEETSSEEEEEEE-SSHHHHHHHHHHHHH
T ss_pred HHHHHhhhcCcCCEECCCCcEEEEEEeCCHHHHHHHHHHHHH
Confidence 46667777777 2 35668899999999999884
No 142
>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed
Probab=34.44 E-value=73 Score=30.20 Aligned_cols=47 Identities=19% Similarity=0.074 Sum_probs=34.7
Q ss_pred eEEEeCCHHHHHHHHhhhcC-cceeecccChH---HHHhccchhcccccCCC
Q 046320 95 FMVFAREIMRAITFSNLYAP-EHLIVSAKDTE---KWESIIENAGSMLFGEW 142 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~AP-EHL~l~~~d~~---~~l~~I~nAGsiFlG~~ 142 (198)
.++.++|++||++++|..-- =-..+.++|.. .+++++ ++|.+++...
T Consensus 382 ~V~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l-~~G~v~iN~~ 432 (487)
T PRK09457 382 QVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEI-RAGIVNWNKP 432 (487)
T ss_pred EEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhC-CcceEEEECC
Confidence 45567899999999997422 23678888885 466676 4899988854
No 143
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=33.66 E-value=1.9e+02 Score=21.02 Aligned_cols=67 Identities=13% Similarity=0.205 Sum_probs=37.1
Q ss_pred eEEEEeCCCCCHHHH------------HHHHhhccCCCCceEEEecCchHhHHHHHHHHHHHHhhCCceEEEe-----CC
Q 046320 39 QVLVIADRYPSPLHV------------AADLLSQRGPDSQGVLVIVGDGVDIKAIEEEIRMQCQSLPNFMVFA-----RE 101 (198)
Q Consensus 39 EvlViAD~tAnp~~v------------AaDLLaQHdp~a~avLvt~~~~l~~~~V~~~i~~~l~~l~g~iv~v-----~~ 101 (198)
|+.-|+|.+.....- .-|||+.+++| ++.|++....-.+-+.+.+++ |.-|++ .+
T Consensus 27 ~v~~v~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D--~V~I~tp~~~h~~~~~~~l~~------g~~v~~EKP~~~~ 98 (120)
T PF01408_consen 27 EVVAVCDPDPERAEAFAEKYGIPVYTDLEELLADEDVD--AVIIATPPSSHAEIAKKALEA------GKHVLVEKPLALT 98 (120)
T ss_dssp EEEEEECSSHHHHHHHHHHTTSEEESSHHHHHHHTTES--EEEEESSGGGHHHHHHHHHHT------TSEEEEESSSSSS
T ss_pred EEEEEEeCCHHHHHHHHHHhcccchhHHHHHHHhhcCC--EEEEecCCcchHHHHHHHHHc------CCEEEEEcCCcCC
Confidence 677777765432222 23566667676 444544443323555555554 334443 37
Q ss_pred HHHHHHHHhhhc
Q 046320 102 IMRAITFSNLYA 113 (198)
Q Consensus 102 l~eai~~~N~~A 113 (198)
++|+-++.+...
T Consensus 99 ~~~~~~l~~~a~ 110 (120)
T PF01408_consen 99 LEEAEELVEAAK 110 (120)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888877766543
No 144
>cd00001 PTS_IIB_man PTS_IIB, PTS system, Mannose/sorbose specific IIB subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIB PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. The active site histidine receives a phosphate group from the IIA subunit and transfers it to the substrate.
Probab=31.87 E-value=1.5e+02 Score=24.14 Aligned_cols=75 Identities=12% Similarity=0.204 Sum_probs=42.0
Q ss_pred CceEEEecCchHhHHHHHHHHHHHHhhCC-ceEEEeCCHHHHHHHHhh--hcCcceeecccChHHHHhccch---hcccc
Q 046320 65 SQGVLVIVGDGVDIKAIEEEIRMQCQSLP-NFMVFAREIMRAITFSNL--YAPEHLIVSAKDTEKWESIIEN---AGSML 138 (198)
Q Consensus 65 a~avLvt~~~~l~~~~V~~~i~~~l~~l~-g~iv~v~~l~eai~~~N~--~APEHL~l~~~d~~~~l~~I~n---AGsiF 138 (198)
+..|+|.+|+-- .+..++.+.+.. .| |.-+.+-|.++|++..|. +..+..-+.+++|...++-+++ .-+|=
T Consensus 25 ~~~IvVvdD~~A-~D~~~k~~l~ma--~P~gvk~~i~sve~a~~~l~~~~~~~~~v~il~k~~~~~~~l~~~g~~i~~vn 101 (151)
T cd00001 25 ANRIIVVNDEVA-NDELRKTLLKLA--APPGVKLRIFTVEKAIEAINSPKYDKQRVFLLFKNPQDVLRLVEGGVPIKTIN 101 (151)
T ss_pred CCEEEEEccccc-CCHHHHHHHHhh--CCCCCeEEEEEHHHHHHHHhCcCCCCceEEEEECCHHHHHHHHHcCCCCCEEE
Confidence 345555555433 254555444422 23 555566677777777763 5666777777777766666552 22455
Q ss_pred cCCC
Q 046320 139 FGEW 142 (198)
Q Consensus 139 lG~~ 142 (198)
+|..
T Consensus 102 vG~~ 105 (151)
T cd00001 102 VGNM 105 (151)
T ss_pred ECCC
Confidence 5544
No 145
>PF06470 SMC_hinge: SMC proteins Flexible Hinge Domain; InterPro: IPR010935 This entry represents the hinge region of the SMC (Structural Maintenance of Chromosomes) family of proteins. The hinge region is responsible for formation of the DNA interacting dimer. It is also possible that the precise structure of it is an essential determinant of the specificity of the DNA-protein interaction [].; GO: 0005515 protein binding, 0005524 ATP binding, 0051276 chromosome organization, 0005694 chromosome; PDB: 2WD5_A 1GXL_C 1GXK_A 1GXJ_A 3NWC_B 3L51_A.
Probab=28.59 E-value=69 Score=23.57 Aligned_cols=16 Identities=13% Similarity=0.167 Sum_probs=14.1
Q ss_pred ceEEEeCCHHHHHHHH
Q 046320 94 NFMVFAREIMRAITFS 109 (198)
Q Consensus 94 g~iv~v~~l~eai~~~ 109 (198)
|.+++|+|+++|.+++
T Consensus 105 g~~~vv~~l~~A~~la 120 (120)
T PF06470_consen 105 GDVVVVDDLEEARKLA 120 (120)
T ss_dssp TTEEEESSHHHHHHHH
T ss_pred CCEEEECCHHHHHHhC
Confidence 6699999999999875
No 146
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=28.25 E-value=84 Score=29.39 Aligned_cols=68 Identities=15% Similarity=0.151 Sum_probs=45.3
Q ss_pred CchHhHHHHHHHHHHHHhhCC-ceEEEeCCHHHHHHHHhhhcCcc--eeecccChHHHHhcc-chhcccccCC
Q 046320 73 GDGVDIKAIEEEIRMQCQSLP-NFMVFAREIMRAITFSNLYAPEH--LIVSAKDTEKWESII-ENAGSMLFGE 141 (198)
Q Consensus 73 ~~~l~~~~V~~~i~~~l~~l~-g~iv~v~~l~eai~~~N~~APEH--L~l~~~d~~~~l~~I-~nAGsiFlG~ 141 (198)
|.++- ++.+.|+.+..+.+- ..|+|+-|-+||+.+++++|=-+ -..++..|+++-.+= +..-+=|+|.
T Consensus 168 D~kLR-~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P~~~fVA~FiG~ 239 (352)
T COG3842 168 DAKLR-EQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERPATRFVADFIGE 239 (352)
T ss_pred hHHHH-HHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCcchHHHHHHhCc
Confidence 44554 666666666666664 57899999999999999998643 244666777766543 3334445554
No 147
>PF03830 PTSIIB_sorb: PTS system sorbose subfamily IIB component; InterPro: IPR004720 Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Man family is unique in several respects among PTS permease families: It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This entry is specific for the IIB components of this family of PTS transporters [].; GO: 0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity, 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0005737 cytoplasm; PDB: 3LFJ_B 1BLE_A 3P3V_B 1NRZ_C 3EYE_A 1VSQ_C 2JZH_A 2JZN_C 2JZO_D.
Probab=27.78 E-value=1.2e+02 Score=24.67 Aligned_cols=77 Identities=13% Similarity=0.183 Sum_probs=49.5
Q ss_pred CCceEEEecCchHhHHHHHHHHHHHHhhCC-ceEEEeCCHHHHHHHHhhhc--CcceeecccChHHHHhccchh---ccc
Q 046320 64 DSQGVLVIVGDGVDIKAIEEEIRMQCQSLP-NFMVFAREIMRAITFSNLYA--PEHLIVSAKDTEKWESIIENA---GSM 137 (198)
Q Consensus 64 ~a~avLvt~~~~l~~~~V~~~i~~~l~~l~-g~iv~v~~l~eai~~~N~~A--PEHL~l~~~d~~~~l~~I~nA---Gsi 137 (198)
.+..|+|.+|+ ++.+..++.+.+.. .| |.-+.+-|.++|++..+..- .+..-+.+++|.....-+++- -+|
T Consensus 25 ~~~~IiVvdD~-~A~D~~~k~~l~ma--~P~gvk~~i~sv~~a~~~l~~~~~~~~~v~ii~k~~~d~~~l~~~g~~i~~i 101 (151)
T PF03830_consen 25 NANRIIVVDDE-VANDPFQKMILKMA--APAGVKLSIFSVEEAIEKLKKPEYSKKRVLIIVKSPEDALRLVEAGVKIKEI 101 (151)
T ss_dssp TTSEEEEE-HH-HHHSHHHHHHHHHT--SHTTSEEEEE-HHHHHHHHCGGGGTTEEEEEEESSHHHHHHHHHTT---SEE
T ss_pred ccCEEEEECHH-HhcCHHHHHHHHHh--hcCCCceEEEEHHHHHHHHHhcccCCceEEEEECCHHHHHHHHhcCCCCCEE
Confidence 34567777665 43477777666543 24 66777789999999988855 778999999997766655432 344
Q ss_pred ccCCCC
Q 046320 138 LFGEWT 143 (198)
Q Consensus 138 FlG~~t 143 (198)
=+|...
T Consensus 102 NvG~~~ 107 (151)
T PF03830_consen 102 NVGNMS 107 (151)
T ss_dssp EEEEB-
T ss_pred EECCCC
Confidence 455433
No 148
>cd07186 CofD_like LPPG:FO 2-phospho-L-lactate transferase; important in F420 biosynthesis. CofD is a 2-phospho-L-lactate transferase that catalyzes the last step in the biosynthesis of coenzyme F(420)-0 (F(420) without polyglutamate) by transferring the lactyl phosphate moiety of lactyl(2)diphospho-(5')guanosine (LPPG) to 7,8-didemethyl-8-hydroxy-5-deazariboflavin ribitol (F0). F420 is a hydride carrier, important for energy metabolism of methanogenic archaea, as well as for the biosynthesis of other natural products, like tetracycline in Streptomyces. F420 and some of its precursors are also utilized as cofactors for enzymes, like DNA photolyase in Mycobacterium tuberculosis.
Probab=27.21 E-value=32 Score=31.58 Aligned_cols=12 Identities=33% Similarity=0.576 Sum_probs=10.1
Q ss_pred EEecCCcHHHHH
Q 046320 3 KIFGPGNKYVTA 14 (198)
Q Consensus 3 kIvGPGN~yV~~ 14 (198)
.|.||||.|+.-
T Consensus 187 IVlGPgsp~TSI 198 (303)
T cd07186 187 VIIGPSNPVTSI 198 (303)
T ss_pred EEECCCccHHHh
Confidence 578999999864
No 149
>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.
Probab=26.33 E-value=39 Score=25.26 Aligned_cols=30 Identities=17% Similarity=0.336 Sum_probs=26.9
Q ss_pred hcCcceeecccChHHHHhccchhcccccCC
Q 046320 112 YAPEHLIVSAKDTEKWESIIENAGSMLFGE 141 (198)
Q Consensus 112 ~APEHL~l~~~d~~~~l~~I~nAGsiFlG~ 141 (198)
-..-|+.+.++|-++..+++++.|.-|+++
T Consensus 86 ~g~~hia~~v~d~d~~~~~l~~~G~~~~~~ 115 (142)
T cd08353 86 LGLRRVMFAVDDIDARVARLRKHGAELVGE 115 (142)
T ss_pred CCceEEEEEeCCHHHHHHHHHHCCCceeCC
Confidence 345699999999999999999999999974
No 150
>TIGR01819 F420_cofD LPPG:FO 2-phospho-L-lactate transferase. This model represents LPPG:Fo 2-phospho-L-lactate transferase, which catalyses the fourth step in the biosynthesis of coenzyme F420, a flavin derivative found in methanogens, the Mycobacteria, and several other lineages. This enzyme is characterized so far in Methanococcus jannaschii but appears restricted to F420-containing species and is predicted to carry out the same function in these other species. The clade represented by this model is one of two major divisions of proteins in pfam model pfam01933.
Probab=26.22 E-value=34 Score=31.35 Aligned_cols=15 Identities=20% Similarity=0.487 Sum_probs=11.7
Q ss_pred EEecCCcHHHHHHHH
Q 046320 3 KIFGPGNKYVTAAKM 17 (198)
Q Consensus 3 kIvGPGN~yV~~AK~ 17 (198)
.|.||||.|+.--=-
T Consensus 186 IIlGPgsp~TSI~P~ 200 (297)
T TIGR01819 186 ILIGPSNPITSIGPI 200 (297)
T ss_pred EEECCCccHHHhhhh
Confidence 578999999875443
No 151
>PRK01222 N-(5'-phosphoribosyl)anthranilate isomerase; Provisional
Probab=26.08 E-value=1.7e+02 Score=24.86 Aligned_cols=39 Identities=5% Similarity=0.012 Sum_probs=29.6
Q ss_pred EEEeCCHHHHHHHHhhhcCcceeecccChHHHHhccchh
Q 046320 96 MVFAREIMRAITFSNLYAPEHLIVSAKDTEKWESIIENA 134 (198)
Q Consensus 96 iv~v~~l~eai~~~N~~APEHL~l~~~d~~~~l~~I~nA 134 (198)
+++-.+.++..++++.+-|.-++|+-..+..+++.++..
T Consensus 60 Vf~~~~~~~i~~~~~~~~~d~vQLHg~e~~~~~~~l~~~ 98 (210)
T PRK01222 60 VFVNASDEEIDEIVETVPLDLLQLHGDETPEFCRQLKRR 98 (210)
T ss_pred EEeCCCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHhh
Confidence 455567888888888888888888877667777666653
No 152
>COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription]
Probab=26.03 E-value=2.1e+02 Score=24.66 Aligned_cols=80 Identities=14% Similarity=0.226 Sum_probs=48.6
Q ss_pred cCCCCceEEEecCchHhHHHHHHHHHHHHhhCCce-EEEeCCHHHHHHHHhhhcCcceeecc----cChHHHHhccchh-
Q 046320 61 RGPDSQGVLVIVGDGVDIKAIEEEIRMQCQSLPNF-MVFAREIMRAITFSNLYAPEHLIVSA----KDTEKWESIIENA- 134 (198)
Q Consensus 61 Hdp~a~avLvt~~~~l~~~~V~~~i~~~l~~l~g~-iv~v~~l~eai~~~N~~APEHL~l~~----~d~~~~l~~I~nA- 134 (198)
|+|+- +.|+..|....+......+++ - |+ +..+.+.+|++..+....|-|--+-. .+--.+++.++..
T Consensus 6 ~~pd~-~lllvdDD~~f~~~LaRa~e~----R-Gf~v~~a~~~~eal~~art~~PayAvvDlkL~~gsGL~~i~~lr~~~ 79 (182)
T COG4567 6 IGPDK-SLLLVDDDTPFLRTLARAMER----R-GFAVVTAESVEEALAAARTAPPAYAVVDLKLGDGSGLAVIEALRERR 79 (182)
T ss_pred cCCCc-eeEEecCChHHHHHHHHHHhc----c-CceeEeeccHHHHHHHHhcCCCceEEEEeeecCCCchHHHHHHHhcC
Confidence 56765 566655554433544444443 3 54 77789999999999999998865543 2445566655543
Q ss_pred ---cccccCCCCccc
Q 046320 135 ---GSMLFGEWTPES 146 (198)
Q Consensus 135 ---GsiFlG~~tp~a 146 (198)
--|-|-.|...+
T Consensus 80 ~d~rivvLTGy~sIA 94 (182)
T COG4567 80 ADMRIVVLTGYASIA 94 (182)
T ss_pred CcceEEEEecchHHH
Confidence 234444455444
No 153
>PRK00823 phhB pterin-4-alpha-carbinolamine dehydratase; Validated
Probab=25.68 E-value=1.2e+02 Score=22.75 Aligned_cols=31 Identities=29% Similarity=0.274 Sum_probs=22.9
Q ss_pred HHHHHHHhhCC------c-----eEEEeCCHHHHHHHHhhhc
Q 046320 83 EEIRMQCQSLP------N-----FMVFAREIMRAITFSNLYA 113 (198)
Q Consensus 83 ~~i~~~l~~l~------g-----~iv~v~~l~eai~~~N~~A 113 (198)
+++...|..+| + .-+.++|..++++|+|.+|
T Consensus 9 ~ei~~~l~~l~gW~~~~~~~~l~r~f~f~~f~~a~~f~~~Va 50 (97)
T PRK00823 9 EEIAELLPQLPGWTLVGDRDAIERTFKFKNFNEAFAFMNRVA 50 (97)
T ss_pred HHHHHHhhcCCCCeEeCCcCeEEEEEEeCCHHHHHHHHHHHH
Confidence 34555666666 2 3456899999999999987
No 154
>PRK09201 amidase; Provisional
Probab=25.30 E-value=96 Score=29.27 Aligned_cols=95 Identities=14% Similarity=0.128 Sum_probs=49.3
Q ss_pred CCCCCHHHHHHHHhhc---cCCCCceEEEecCchHhHHHHHHHHHHHHh-hC---C--ceEEEeCCHHHHHHHHhhhcCc
Q 046320 45 DRYPSPLHVAADLLSQ---RGPDSQGVLVIVGDGVDIKAIEEEIRMQCQ-SL---P--NFMVFAREIMRAITFSNLYAPE 115 (198)
Q Consensus 45 D~tAnp~~vAaDLLaQ---Hdp~a~avLvt~~~~l~~~~V~~~i~~~l~-~l---~--g~iv~v~~l~eai~~~N~~APE 115 (198)
.+...|..+.-..|.. ++|.--++.-. +.+.+.++. +++++.+. .. | |.-|.++|.-+.-.+-....--
T Consensus 18 ~g~~t~~ev~~~~l~ri~~~~~~lna~~~~-~~d~al~~A-~~~d~~~~~g~~~gpL~GvPi~vKD~~~v~G~~tt~Gs~ 95 (465)
T PRK09201 18 AGELSARAVAQATLARIARANPQLNAFTAV-TAERALAEA-ARIDAARAAGEPLGPLAGVPFAVKNLFDVAGLTTLAGSK 95 (465)
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCceEEEEc-CHHHHHHHH-HHHHHHHHcCCCCCCcCCceEEEEeccccCCcccCcCCh
Confidence 3455777777777777 77755555433 333321222 23333322 11 2 6666666643322222222222
Q ss_pred ceeec-c-cChHHHHhccchhcccccCC
Q 046320 116 HLIVS-A-KDTEKWESIIENAGSMLFGE 141 (198)
Q Consensus 116 HL~l~-~-~d~~~~l~~I~nAGsiFlG~ 141 (198)
.+.=. - ..--.++++++.||+|++|+
T Consensus 96 ~~~~~~~~~~dA~vV~~Lr~aGAii~GK 123 (465)
T PRK09201 96 INRDRPPATRDATAVRRLEAAGAVLVGA 123 (465)
T ss_pred hhccCCCCCCChHHHHHHHHCCCEEEEe
Confidence 22111 1 12345899999999999997
No 155
>cd02395 SF1_like-KH Splicing factor 1 (SF1) K homology RNA-binding domain (KH). Splicing factor 1 (SF1) specifically recognizes the intron branch point sequence (BPS) UACUAAC in the pre-mRNA transcripts during spliceosome assembly. We show that the KH-QUA2 region of SF1 defines an enlarged KH (hnRNP K) fold which is necessary and sufficient for BPS binding. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA.
Probab=25.16 E-value=2.3e+02 Score=22.38 Aligned_cols=30 Identities=13% Similarity=0.061 Sum_probs=16.5
Q ss_pred cCCCCceEEEecCc--hHhHHHHHHHHHHHHh
Q 046320 61 RGPDSQGVLVIVGD--GVDIKAIEEEIRMQCQ 90 (198)
Q Consensus 61 Hdp~a~avLvt~~~--~l~~~~V~~~i~~~l~ 90 (198)
|..+---|+|+.+. .-.+++..+.|+..+.
T Consensus 63 ~~~eplhV~I~a~~~~~e~~~~A~~~I~~ll~ 94 (120)
T cd02395 63 HLNEPLHVLITAETPPEEALAKAVEAIEELLK 94 (120)
T ss_pred cCCCCcEEEEEeCCcHHHHHHHHHHHHHHHhc
Confidence 55555666676554 2223555555665554
No 156
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=25.02 E-value=1.1e+02 Score=26.97 Aligned_cols=37 Identities=14% Similarity=0.233 Sum_probs=26.6
Q ss_pred EEEeCC-CC--CH--HHHHHHHhhc--cCCCCceEEEecCchHh
Q 046320 41 LVIADR-YP--SP--LHVAADLLSQ--RGPDSQGVLVIVGDGVD 77 (198)
Q Consensus 41 lViAD~-tA--np--~~vAaDLLaQ--Hdp~a~avLvt~~~~l~ 77 (198)
+|+||| |. |+ .....|||.+ +.-....++||.|..++
T Consensus 163 iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA 206 (226)
T COG1136 163 IILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELA 206 (226)
T ss_pred eEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHH
Confidence 578886 33 33 3467889988 44467788889999885
No 157
>PRK13606 LPPG:FO 2-phospho-L-lactate transferase; Provisional
Probab=24.58 E-value=38 Score=31.12 Aligned_cols=15 Identities=27% Similarity=0.514 Sum_probs=11.6
Q ss_pred EEecCCcHHHHHHHH
Q 046320 3 KIFGPGNKYVTAAKM 17 (198)
Q Consensus 3 kIvGPGN~yV~~AK~ 17 (198)
.|.||||.|+.--=-
T Consensus 189 IiiGPgnp~TSI~P~ 203 (303)
T PRK13606 189 VIIGPSNPVTSIGPI 203 (303)
T ss_pred EEECCCccHHhhchh
Confidence 478999999875443
No 158
>COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism]
Probab=24.18 E-value=2.3e+02 Score=23.84 Aligned_cols=66 Identities=12% Similarity=0.225 Sum_probs=49.6
Q ss_pred CCceEEEecCchHhHHHHHHHHHHHHhhCC-ceEEEeCCHHHHHHHHhh--hcCcceeecccChHHHHhccc
Q 046320 64 DSQGVLVIVGDGVDIKAIEEEIRMQCQSLP-NFMVFAREIMRAITFSNL--YAPEHLIVSAKDTEKWESIIE 132 (198)
Q Consensus 64 ~a~avLvt~~~~l~~~~V~~~i~~~l~~l~-g~iv~v~~l~eai~~~N~--~APEHL~l~~~d~~~~l~~I~ 132 (198)
++..|+|.+|+-- -+.+++.+.++. .| |.-+.+-+.+.+++..|. |.=.++-|.+++|...+.-++
T Consensus 26 ~a~~IiVvnD~va-~D~~rk~~lk~a--aP~gvk~~~~~v~k~i~~i~~~~~~~~~v~ll~~~p~d~~~lve 94 (159)
T COG3444 26 NANRIIVVNDEVA-NDDVRKTLLKQA--APPGVKLRFFSVEKAIDVINKPKYDGQKVFLLFENPQDVLRLVE 94 (159)
T ss_pred CCCEEEEEccccc-cCHHHHHHHHhh--cCCceEEEEEEHHHHHHHhcCCCCCCeEEEEEECCHHHHHHHHh
Confidence 4567788877754 377887776653 34 767778899999999987 455699999999988776554
No 159
>PRK08186 allophanate hydrolase; Provisional
Probab=24.00 E-value=92 Score=30.79 Aligned_cols=94 Identities=14% Similarity=0.197 Sum_probs=45.1
Q ss_pred CCCCHHHHHHHHhhc--cCCCCceEEEecCchHhHHHHHHHHHHHH-hhCC--ceEEEeCCHHHHHHHHhhhc-Ccceee
Q 046320 46 RYPSPLHVAADLLSQ--RGPDSQGVLVIVGDGVDIKAIEEEIRMQC-QSLP--NFMVFAREIMRAITFSNLYA-PEHLIV 119 (198)
Q Consensus 46 ~tAnp~~vAaDLLaQ--Hdp~a~avLvt~~~~l~~~~V~~~i~~~l-~~l~--g~iv~v~~l~eai~~~N~~A-PEHL~l 119 (198)
+...|..+....|.. ..+.-.++.-....+.+.++. +++++.. ...| |.=|.++|.-+.-.+--..+ |.....
T Consensus 19 g~~t~~evv~a~l~ri~~~~~~~a~i~~~~~~~a~~~A-~~ld~~~~~~gPL~GVP~aVKDnidvaG~pTTaGs~~~~~~ 97 (600)
T PRK08186 19 GTLTPRAVVAALYARIAAVDDPEVWIHLRPEADLLAQA-AALEARDPAALPLYGVPFAVKDNIDVAGLPTTAACPAFAYT 97 (600)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCEEEEeCchHHHHHHH-HHHhhhccccCCCCCCeEEeecceecCCcccCcCCHhHcCC
Confidence 445777777777777 223333443333322221332 2334332 2334 65555554322111111111 110011
Q ss_pred cccChHHHHhccchhcccccCC
Q 046320 120 SAKDTEKWESIIENAGSMLFGE 141 (198)
Q Consensus 120 ~~~d~~~~l~~I~nAGsiFlG~ 141 (198)
-.+| -.++++++.||+|.+|+
T Consensus 98 p~~D-A~vV~rLr~AGAIilGK 118 (600)
T PRK08186 98 PERD-ATVVARLRAAGAIVIGK 118 (600)
T ss_pred CCcC-hHHHHHHHHCCCEEEee
Confidence 2234 46899999999999997
No 160
>PF09960 DUF2194: Uncharacterized protein conserved in bacteria (DUF2194); InterPro: IPR018695 This family of prokaryotic proteins has no known function; however it may be a membrane protein.
Probab=23.87 E-value=1e+02 Score=30.74 Aligned_cols=120 Identities=18% Similarity=0.160 Sum_probs=81.1
Q ss_pred cCCcceEEEEeCCCCCHHHHHHHHhhc------cCCCCceEEEec------------CchHhHHHHHHHHHHHHhhCC-c
Q 046320 34 KVQTAQVLVIADRYPSPLHVAADLLSQ------RGPDSQGVLVIV------------GDGVDIKAIEEEIRMQCQSLP-N 94 (198)
Q Consensus 34 ~AGPSEvlViAD~tAnp~~vAaDLLaQ------Hdp~a~avLvt~------------~~~l~~~~V~~~i~~~l~~l~-g 94 (198)
.-||-|..--. .+.++.+.--+||.| ||-+-+..+.-. |.+- +..-.+++.+.++.+- +
T Consensus 315 ~~~pf~~~~~~-~~~~~~~~g~~Ll~~ggElG~HGYNHqpL~~~~~~~~~~~Y~~W~~~~~-m~~sl~~l~~f~~~l~p~ 392 (585)
T PF09960_consen 315 TNPPFEFLEQE-DTDRFIYFGRELLKSGGELGLHGYNHQPLTLEGDYGDEYGYKPWPSKED-MAESLKELKRFVKSLFPN 392 (585)
T ss_pred CCCCccccccc-chhhHHHHHHHHHhcCCceEEecccCCCCcCCCcccccccCcCCCCHHH-HHHHHHHHHHHHHHhCCC
Confidence 55665544443 468888899999988 999888876554 4333 2444445555555432 1
Q ss_pred ---eEEEeCCHHHHHHHHhhhcCcceeecccChHHHHhccchhcccccCCCCccc---------------cccccCCccc
Q 046320 95 ---FMVFAREIMRAITFSNLYAPEHLIVSAKDTEKWESIIENAGSMLFGEWTPES---------------ARMYGGVSLD 156 (198)
Q Consensus 95 ---~iv~v~~l~eai~~~N~~APEHL~l~~~d~~~~l~~I~nAGsiFlG~~tp~a---------------AR~~sgLsv~ 156 (198)
...|-. +|-+.||=.+... +.++.|+--||+|.|..+.-+ -|.+||-...
T Consensus 393 ~~~~~YVPP--------SNils~eG~e~L~----~~~P~ik~IaS~Y~~~~~~~~y~QEF~~~~dgi~e~PRisSG~~~~ 460 (585)
T PF09960_consen 393 YEPSSYVPP--------SNILSEEGREALK----KAFPEIKTIASLYFGDDEEGEYVQEFEIAPDGIVEFPRISSGYYPD 460 (585)
T ss_pred cceEEecCC--------ccccCHHHHHHHH----HhCCCeEEEEEeeecCCcCCcceEEeeECCCCeEEeCccccCCccC
Confidence 122222 3555555554443 568899999999999988333 8999999999
Q ss_pred cccccchHHHH
Q 046320 157 SFLKYVTVQSL 167 (198)
Q Consensus 157 ~FlK~~s~~~~ 167 (198)
+|++...+-.+
T Consensus 461 ~~~~~~~~s~l 471 (585)
T PF09960_consen 461 DYMLWAIVSAL 471 (585)
T ss_pred hHHHHHHHHHH
Confidence 99999988877
No 161
>PF08972 DUF1902: Domain of unknown function (DUF1902); InterPro: IPR015066 Members of these prokaryotic proteins adopt a fold consisting of one alpha-helix and four beta-strands. Their function has not, as yet, been elucidated []. ; PDB: 1WV8_A.
Probab=23.35 E-value=41 Score=23.65 Aligned_cols=29 Identities=21% Similarity=0.267 Sum_probs=22.5
Q ss_pred CceEEEeCCHHHHHHHHhhhcCcceeecc
Q 046320 93 PNFMVFAREIMRAITFSNLYAPEHLIVSA 121 (198)
Q Consensus 93 ~g~iv~v~~l~eai~~~N~~APEHL~l~~ 121 (198)
||.+.-.+++++-++....++||=|++..
T Consensus 22 pGLvtEA~Tle~L~~kl~~~ipeLLelN~ 50 (54)
T PF08972_consen 22 PGLVTEADTLEELIEKLRVMIPELLELNG 50 (54)
T ss_dssp TT---EESSHHHHHHHHHHHHHHHHHHS-
T ss_pred ccceecCccHHHHHHHHHHHHHHHHHhcC
Confidence 47888899999999999999999888754
No 162
>COG2154 Pterin-4a-carbinolamine dehydratase [Coenzyme metabolism]
Probab=22.50 E-value=1.3e+02 Score=23.54 Aligned_cols=32 Identities=28% Similarity=0.311 Sum_probs=24.6
Q ss_pred HHHHHHHhhCCc-----------eEEEeCCHHHHHHHHhhhcC
Q 046320 83 EEIRMQCQSLPN-----------FMVFAREIMRAITFSNLYAP 114 (198)
Q Consensus 83 ~~i~~~l~~l~g-----------~iv~v~~l~eai~~~N~~AP 114 (198)
+++...|..+|| .-+-+++..+++.|.|++|.
T Consensus 9 ~~~~~~l~~l~gW~l~~~~~~l~r~f~FknF~~a~~F~~~vA~ 51 (101)
T COG2154 9 EELAELLRALPGWELADDGAKLTRTFKFKNFKQAIAFVNRVAE 51 (101)
T ss_pred HHHHHHhcCCCCCEEecCcceEEEEEEcCCHHHHHHHHHHHHH
Confidence 456677777882 34557899999999999985
No 163
>PRK10291 glyoxalase I; Provisional
Probab=22.42 E-value=60 Score=24.03 Aligned_cols=32 Identities=19% Similarity=0.179 Sum_probs=26.3
Q ss_pred CcceeecccChHHHHhccchhcccccCCCCcc
Q 046320 114 PEHLIVSAKDTEKWESIIENAGSMLFGEWTPE 145 (198)
Q Consensus 114 PEHL~l~~~d~~~~l~~I~nAGsiFlG~~tp~ 145 (198)
+-|+.+.++|-++..++++..|.-++-...|.
T Consensus 66 ~~hlaf~V~d~~~~~~~l~~~G~~~~~~~~~~ 97 (129)
T PRK10291 66 YGHIALSVDNAAEACEKIRQNGGNVTREAGPV 97 (129)
T ss_pred eeEEEEEeCCHHHHHHHHHHcCCccccCCccc
Confidence 45999999999999999999998877544443
No 164
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A ....
Probab=22.35 E-value=1.1e+02 Score=23.63 Aligned_cols=17 Identities=24% Similarity=0.544 Sum_probs=11.1
Q ss_pred HHHHhccchhcccccCC
Q 046320 125 EKWESIIENAGSMLFGE 141 (198)
Q Consensus 125 ~~~l~~I~nAGsiFlG~ 141 (198)
.++.+++..+|-.|+|+
T Consensus 89 ~~fa~~~~~~gi~fiGp 105 (110)
T PF00289_consen 89 AEFAEACEDAGIIFIGP 105 (110)
T ss_dssp HHHHHHHHHTT-EESSS
T ss_pred HHHHHHHHHCCCEEECc
Confidence 45666666777777775
No 165
>PF03709 OKR_DC_1_N: Orn/Lys/Arg decarboxylase, N-terminal domain; InterPro: IPR005308 This domain has a flavodoxin-like fold, and is termed the "wing" domain because of its position in the overall 3D structure. Ornithine decarboxylase from Lactobacillus 30a (L30a OrnDC, P43099 from SWISSPROT) is representative of the large, pyridoxal-5'-phosphate-dependent decarboxylases that act on lysine, arginine or ornithine. The crystal structure of the L30a OrnDC has been solved to 3.0 A resolution. Six dimers related by C6 symmetry compose the enzymatically active dodecamer (approximately 106 Da). Each monomer of L30a OrnDC can be described in terms of five sequential folding domains. The amino-terminal domain, residues 1 to 107, consists of a five-stranded beta-sheet termed the "wing" domain. Two wing domains of each dimer project inward towards the centre of the dodecamer and contribute to dodecamer stabilisation [].; GO: 0016831 carboxy-lyase activity; PDB: 3Q16_C 3N75_A 1C4K_A 1ORD_A 2VYC_D.
Probab=21.94 E-value=1.1e+02 Score=23.26 Aligned_cols=41 Identities=22% Similarity=0.324 Sum_probs=25.4
Q ss_pred HHhhc--cCCCCceEEEecC----chHhHHHHHHHHHHHHhhCCceEEE
Q 046320 56 DLLSQ--RGPDSQGVLVIVG----DGVDIKAIEEEIRMQCQSLPNFMVF 98 (198)
Q Consensus 56 DLLaQ--Hdp~a~avLvt~~----~~l~~~~V~~~i~~~l~~l~g~iv~ 98 (198)
|+++= +.++-.||+++++ ... .++.+++.+.=..+|=+++.
T Consensus 28 d~~~~i~~~~~i~avvi~~d~~~~~~~--~~ll~~i~~~~~~iPVFl~~ 74 (115)
T PF03709_consen 28 DALAIIESFTDIAAVVISWDGEEEDEA--QELLDKIRERNFGIPVFLLA 74 (115)
T ss_dssp HHHHHHHCTTTEEEEEEECHHHHHHHH--HHHHHHHHHHSTT-EEEEEE
T ss_pred HHHHHHHhCCCeeEEEEEcccccchhH--HHHHHHHHHhCCCCCEEEEe
Confidence 44444 7778889999988 322 55666666666666644444
No 166
>PRK11425 PTS system N-acetylgalactosamine-specific transporter subunit IIB; Provisional
Probab=21.54 E-value=3e+02 Score=22.61 Aligned_cols=16 Identities=6% Similarity=0.210 Sum_probs=9.2
Q ss_pred eEEEeCCHHHHHHHHh
Q 046320 95 FMVFAREIMRAITFSN 110 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N 110 (198)
.++++++.+++.++..
T Consensus 79 v~il~k~~~d~~~l~~ 94 (157)
T PRK11425 79 ILLVCKTPADFLTLVK 94 (157)
T ss_pred EEEEECCHHHHHHHHH
Confidence 4555566666655555
No 167
>PRK13958 N-(5'-phosphoribosyl)anthranilate isomerase; Provisional
Probab=21.21 E-value=1.3e+02 Score=25.54 Aligned_cols=38 Identities=5% Similarity=0.075 Sum_probs=29.0
Q ss_pred EEEeCCHHHHHHHHhhhcCcceeecccChHHHHhccch
Q 046320 96 MVFAREIMRAITFSNLYAPEHLIVSAKDTEKWESIIEN 133 (198)
Q Consensus 96 iv~v~~l~eai~~~N~~APEHL~l~~~d~~~~l~~I~n 133 (198)
+++-.+.++..++++.+-|..++|+-..+.+++++++.
T Consensus 58 Vf~~~~~~~i~~~~~~~~~d~vQLHG~e~~~~~~~l~~ 95 (207)
T PRK13958 58 VVVNPDLTTIEHILSNTSINTIQLHGTESIDFIQEIKK 95 (207)
T ss_pred EEeCCCHHHHHHHHHhCCCCEEEECCCCCHHHHHHHhh
Confidence 44556788888888888888888888777777776663
No 168
>PRK07486 amidase; Provisional
Probab=20.55 E-value=1.5e+02 Score=28.18 Aligned_cols=87 Identities=13% Similarity=0.161 Sum_probs=45.9
Q ss_pred CCCCHHHHHHHHhhc---cCCCCceEEEecCchHhHHHHHHHHHHHHhh-C---C--ceEEEeCCHHHH---------HH
Q 046320 46 RYPSPLHVAADLLSQ---RGPDSQGVLVIVGDGVDIKAIEEEIRMQCQS-L---P--NFMVFAREIMRA---------IT 107 (198)
Q Consensus 46 ~tAnp~~vAaDLLaQ---Hdp~a~avLvt~~~~l~~~~V~~~i~~~l~~-l---~--g~iv~v~~l~ea---------i~ 107 (198)
+.-.|..+.--.|.. +++.-.++.-...++.+.++. +++++.+.. . | |.-|.++|+-+. ..
T Consensus 24 g~~t~~ev~~~~l~ri~~~~~~~na~~~~~~~~~al~~A-~~~d~~~~~g~~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~ 102 (484)
T PRK07486 24 RQVSCVEVMRAYLAHIERVNPAVNAIVALRDRDALLAEA-AEKDAALARGEYRGWLHGMPQAPKDLAPTKGIRTTLGSPI 102 (484)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCceEEEeCccHHHHHHH-HHHHHHHhcCCCCCCcCCCeEEEecccccCCcCcccccHh
Confidence 445677776666666 777555665543433211222 233333221 1 2 555555553221 11
Q ss_pred HHhhhcCcceeecccChHHHHhccchhcccccCC
Q 046320 108 FSNLYAPEHLIVSAKDTEKWESIIENAGSMLFGE 141 (198)
Q Consensus 108 ~~N~~APEHL~l~~~d~~~~l~~I~nAGsiFlG~ 141 (198)
+.|.++ ..| -.+++++++||+|++|.
T Consensus 103 ~~~~~~-------~~d-A~vV~rLr~AGaii~GK 128 (484)
T PRK07486 103 FADQVP-------QED-AIVVERMRAAGAIFIGK 128 (484)
T ss_pred hCCCCC-------CCc-HHHHHHHHHCCCeeEEe
Confidence 223222 234 45899999999999997
No 169
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=20.20 E-value=1.5e+02 Score=26.30 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=30.7
Q ss_pred cCCcceEEEEeCCCCCHHHHHHHHhhc-cCCCCceEEE
Q 046320 34 KVQTAQVLVIADRYPSPLHVAADLLSQ-RGPDSQGVLV 70 (198)
Q Consensus 34 ~AGPSEvlViAD~tAnp~~vAaDLLaQ-Hdp~a~avLv 70 (198)
-+=|.|++||-|.|.|...=.+|.|.. |+.+--.+..
T Consensus 32 ~~~~~eiIivDD~SpDGt~~~a~~L~k~yg~d~i~l~p 69 (238)
T KOG2978|consen 32 EGKKYEIIIVDDASPDGTQEVAKALQKIYGEDNILLKP 69 (238)
T ss_pred hcCceEEEEEeCCCCCccHHHHHHHHHHhCCCcEEEEe
Confidence 456899999999999999999999988 9988544443
No 170
>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=20.19 E-value=63 Score=27.75 Aligned_cols=101 Identities=12% Similarity=0.086 Sum_probs=60.8
Q ss_pred cCCcceEEEEeCCCCCHHH----HHHHHhhc-cC-CCCceEEEecCchHhHHHHHHHHHHHHhhCCceEEEeCCHHHHHH
Q 046320 34 KVQTAQVLVIADRYPSPLH----VAADLLSQ-RG-PDSQGVLVIVGDGVDIKAIEEEIRMQCQSLPNFMVFAREIMRAIT 107 (198)
Q Consensus 34 ~AGPSEvlViAD~tAnp~~----vAaDLLaQ-Hd-p~a~avLvt~~~~l~~~~V~~~i~~~l~~l~g~iv~v~~l~eai~ 107 (198)
++...+++++=..++.=+. ...++|.+ +. .....+++|.+.+.+ ..+.+.+- .+...|+..-.+.+.++..+
T Consensus 130 L~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiivsHd~~~~-~~~~d~i~-~l~~~~~~~~~~~~~~~~~~ 207 (246)
T cd03237 130 LSKDADIYLLDEPSAYLDVEQRLMASKVIRRFAENNEKTAFVVEHDIIMI-DYLADRLI-VFEGEPSVNGVANPPQSLRS 207 (246)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH-HHhCCEEE-EEcCCCeeEEEeCCchHHHH
Confidence 5666777777666664333 34455655 33 245567777776553 44333221 12333445556777888888
Q ss_pred HHhhhcCcceeecc-cChHHHHhccchhccc
Q 046320 108 FSNLYAPEHLIVSA-KDTEKWESIIENAGSM 137 (198)
Q Consensus 108 ~~N~~APEHL~l~~-~d~~~~l~~I~nAGsi 137 (198)
.+|.|.- ++.+.. .||...-++|+--||.
T Consensus 208 ~~~~~l~-~~~~~~~~~~~~~~p~~~~~~~~ 237 (246)
T cd03237 208 GMNRFLK-NLDITFRRDPETGRPRINKLGSV 237 (246)
T ss_pred HHHHHHH-HCCCEEecCcccCCCCCCCcchH
Confidence 8888886 444443 5677888888877764
No 171
>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=20.06 E-value=1.1e+02 Score=29.48 Aligned_cols=46 Identities=17% Similarity=0.276 Sum_probs=33.7
Q ss_pred eEEEeCCHHHHHHHHhhhcCccee-ecccCh---HHHHhccchhcccccCC
Q 046320 95 FMVFAREIMRAITFSNLYAPEHLI-VSAKDT---EKWESIIENAGSMLFGE 141 (198)
Q Consensus 95 ~iv~v~~l~eai~~~N~~APEHL~-l~~~d~---~~~l~~I~nAGsiFlG~ 141 (198)
.+-+|+|+++||+.+|.|..-|=+ |.++|+ +.+...|..| +||+.-
T Consensus 319 avkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~~VDSA-aVyvNA 368 (417)
T COG0014 319 AVKVVDSLDEAIAHINTYGSGHSDAIITEDYANAERFVNEVDSA-AVYVNA 368 (417)
T ss_pred EEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHhhcchh-eEEEec
Confidence 467899999999999999999987 555665 3555555433 456554
Done!