Query 046326
Match_columns 476
No_of_seqs 171 out of 1534
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 10:56:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046326.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046326hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02992 coniferyl-alcohol glu 100.0 6.2E-70 1.3E-74 543.6 45.1 457 7-475 5-468 (481)
2 PLN03015 UDP-glucosyl transfer 100.0 5.8E-69 1.3E-73 533.5 44.6 460 5-475 1-467 (470)
3 PLN00164 glucosyltransferase; 100.0 6.6E-68 1.4E-72 534.2 45.5 457 5-476 1-473 (480)
4 PLN02410 UDP-glucoronosyl/UDP- 100.0 1E-67 2.2E-72 527.4 44.7 434 1-475 1-449 (451)
5 PLN02863 UDP-glucoronosyl/UDP- 100.0 1.4E-67 3.1E-72 530.0 45.1 440 5-475 7-470 (477)
6 PLN02555 limonoid glucosyltran 100.0 1.9E-67 4.1E-72 527.2 44.8 441 1-475 1-468 (480)
7 PLN02210 UDP-glucosyl transfer 100.0 1.1E-66 2.5E-71 521.9 44.9 434 1-476 1-455 (456)
8 PLN02173 UDP-glucosyl transfer 100.0 9.9E-67 2.1E-71 517.9 43.7 426 4-476 2-448 (449)
9 PLN03004 UDP-glycosyltransfera 100.0 4.9E-67 1.1E-71 520.3 40.4 437 5-465 1-450 (451)
10 PLN02207 UDP-glycosyltransfera 100.0 1.9E-66 4.2E-71 517.6 43.2 441 5-475 1-464 (468)
11 PLN02562 UDP-glycosyltransfera 100.0 3.6E-66 7.9E-71 517.8 44.3 426 7-475 6-448 (448)
12 PLN02670 transferase, transfer 100.0 3.9E-66 8.6E-71 515.9 43.6 437 6-476 5-465 (472)
13 PLN02208 glycosyltransferase f 100.0 7.3E-66 1.6E-70 512.8 43.9 420 7-475 4-438 (442)
14 PLN02534 UDP-glycosyltransfera 100.0 1.5E-65 3.2E-70 514.2 44.7 440 5-475 6-485 (491)
15 PLN02764 glycosyltransferase f 100.0 1.6E-64 3.5E-69 500.3 44.0 422 5-475 3-444 (453)
16 PLN02167 UDP-glycosyltransfera 100.0 6.2E-65 1.3E-69 513.8 40.9 443 5-476 1-472 (475)
17 PLN02152 indole-3-acetate beta 100.0 1.3E-64 2.7E-69 503.6 42.4 430 5-475 1-455 (455)
18 PLN00414 glycosyltransferase f 100.0 1.6E-64 3.4E-69 503.8 42.6 419 7-475 4-439 (446)
19 PLN02554 UDP-glycosyltransfera 100.0 1.4E-64 3.1E-69 512.0 41.9 443 7-476 2-478 (481)
20 PLN02448 UDP-glycosyltransfera 100.0 2.9E-64 6.2E-69 508.0 42.9 431 4-475 7-456 (459)
21 PLN03007 UDP-glucosyltransfera 100.0 7.8E-64 1.7E-68 507.3 45.3 440 5-476 3-480 (482)
22 PHA03392 egt ecdysteroid UDP-g 100.0 7.5E-47 1.6E-51 383.8 30.1 386 7-455 20-448 (507)
23 PF00201 UDPGT: UDP-glucoronos 100.0 1.4E-48 3.1E-53 402.9 8.5 382 9-455 2-425 (500)
24 cd03784 GT1_Gtf_like This fami 100.0 5.2E-43 1.1E-47 351.9 24.8 367 8-454 1-386 (401)
25 TIGR01426 MGT glycosyltransfer 100.0 4.1E-42 8.8E-47 344.0 28.6 377 13-473 1-389 (392)
26 KOG1192 UDP-glucuronosyl and U 100.0 3.7E-40 8E-45 340.3 22.5 388 7-454 5-437 (496)
27 COG1819 Glycosyl transferases, 100.0 3.9E-39 8.3E-44 319.0 23.6 385 7-473 1-397 (406)
28 PRK12446 undecaprenyldiphospho 100.0 8.8E-27 1.9E-31 227.9 25.9 322 8-448 2-335 (352)
29 COG0707 MurG UDP-N-acetylgluco 99.9 5.1E-24 1.1E-28 205.9 28.0 327 8-449 1-338 (357)
30 PF13528 Glyco_trans_1_3: Glyc 99.9 1.4E-21 3.1E-26 190.1 26.7 305 8-433 1-317 (318)
31 TIGR00661 MJ1255 conserved hyp 99.9 1.4E-20 2.9E-25 183.0 24.6 84 344-438 229-316 (321)
32 PRK00726 murG undecaprenyldiph 99.8 5.9E-18 1.3E-22 167.4 28.4 346 8-476 2-357 (357)
33 cd03785 GT1_MurG MurG is an N- 99.8 1.4E-16 2.9E-21 157.2 28.5 316 9-438 1-326 (350)
34 TIGR00215 lpxB lipid-A-disacch 99.7 8.7E-17 1.9E-21 159.7 20.6 351 8-472 6-384 (385)
35 TIGR01133 murG undecaprenyldip 99.7 1.2E-15 2.5E-20 150.4 24.9 311 8-438 1-323 (348)
36 PRK13609 diacylglycerol glucos 99.7 1.6E-15 3.5E-20 151.3 22.5 164 268-473 201-368 (380)
37 PRK00025 lpxB lipid-A-disaccha 99.7 8.9E-15 1.9E-19 146.0 22.1 351 7-474 1-375 (380)
38 PRK13608 diacylglycerol glucos 99.6 1.2E-13 2.6E-18 138.0 20.2 163 268-473 201-368 (391)
39 TIGR03590 PseG pseudaminic aci 99.6 3.7E-13 8.1E-18 127.6 22.5 105 270-400 171-278 (279)
40 COG4671 Predicted glycosyl tra 99.5 3.2E-12 7E-17 118.4 20.9 335 6-437 8-366 (400)
41 PF04101 Glyco_tran_28_C: Glyc 99.5 1.1E-15 2.5E-20 133.9 -1.9 138 271-438 1-146 (167)
42 PLN02605 monogalactosyldiacylg 99.5 9.4E-12 2E-16 124.1 23.1 111 344-474 265-379 (382)
43 TIGR03492 conserved hypothetic 99.5 1.1E-11 2.4E-16 123.4 22.8 109 346-472 281-394 (396)
44 PF03033 Glyco_transf_28: Glyc 99.3 1.1E-12 2.5E-17 111.1 5.6 120 10-142 1-133 (139)
45 PLN02871 UDP-sulfoquinovose:DA 99.2 1.2E-08 2.5E-13 104.7 28.9 139 271-449 264-414 (465)
46 cd03814 GT1_like_2 This family 99.2 2.7E-08 5.9E-13 97.8 30.3 109 344-474 247-363 (364)
47 cd03823 GT1_ExpE7_like This fa 99.1 3.2E-07 7E-12 89.9 30.4 81 344-438 243-331 (359)
48 cd03800 GT1_Sucrose_synthase T 99.1 4.6E-07 9.9E-12 90.7 31.5 92 344-449 283-382 (398)
49 cd03794 GT1_wbuB_like This fam 99.0 2.5E-07 5.4E-12 91.5 28.2 94 344-451 275-381 (394)
50 cd03817 GT1_UGDG_like This fam 99.0 1.1E-06 2.4E-11 86.5 32.4 94 344-452 259-360 (374)
51 PRK10307 putative glycosyl tra 99.0 2.1E-06 4.5E-11 86.7 33.7 112 344-474 284-405 (412)
52 cd04962 GT1_like_5 This family 99.0 8E-07 1.7E-11 88.1 28.3 92 344-449 253-350 (371)
53 cd03808 GT1_cap1E_like This fa 99.0 2.1E-06 4.5E-11 83.9 30.9 331 9-449 1-343 (359)
54 PRK05749 3-deoxy-D-manno-octul 99.0 3.8E-07 8.2E-12 92.5 26.1 85 356-451 315-404 (425)
55 cd03816 GT1_ALG1_like This fam 98.9 4.5E-06 9.7E-11 84.3 32.1 91 344-450 294-399 (415)
56 COG3980 spsG Spore coat polysa 98.9 1.6E-07 3.6E-12 85.0 18.8 134 271-438 160-295 (318)
57 cd03825 GT1_wcfI_like This fam 98.9 3.2E-06 6.9E-11 83.4 30.4 111 344-475 244-363 (365)
58 cd03818 GT1_ExpC_like This fam 98.9 3.8E-06 8.3E-11 84.3 29.0 95 344-450 281-381 (396)
59 cd03801 GT1_YqgM_like This fam 98.9 7.6E-06 1.7E-10 79.9 30.5 81 344-438 256-343 (374)
60 PF04007 DUF354: Protein of un 98.9 4.3E-06 9.4E-11 80.5 27.6 105 17-140 9-113 (335)
61 TIGR00236 wecB UDP-N-acetylglu 98.8 4.2E-07 9.1E-12 90.2 21.1 107 344-473 255-364 (365)
62 TIGR03449 mycothiol_MshA UDP-N 98.8 3.4E-05 7.3E-10 77.7 34.1 92 344-449 283-382 (405)
63 cd03820 GT1_amsD_like This fam 98.7 2.9E-05 6.3E-10 75.3 29.6 93 344-450 235-334 (348)
64 cd03821 GT1_Bme6_like This fam 98.7 2.2E-05 4.7E-10 77.2 28.9 90 344-449 262-359 (375)
65 TIGR02472 sucr_P_syn_N sucrose 98.7 3E-05 6.6E-10 78.9 30.2 108 344-472 317-436 (439)
66 cd03795 GT1_like_4 This family 98.7 1.2E-05 2.6E-10 79.0 26.5 97 344-451 244-348 (357)
67 COG1519 KdtA 3-deoxy-D-manno-o 98.7 1.2E-05 2.7E-10 77.7 24.6 327 9-454 50-405 (419)
68 cd03786 GT1_UDP-GlcNAc_2-Epime 98.7 2E-06 4.3E-11 85.2 20.2 134 269-438 198-339 (363)
69 cd03798 GT1_wlbH_like This fam 98.7 7E-05 1.5E-09 73.4 31.1 81 344-438 259-346 (377)
70 cd03819 GT1_WavL_like This fam 98.6 0.00012 2.6E-09 72.0 31.3 96 344-451 246-347 (355)
71 cd03796 GT1_PIG-A_like This fa 98.6 8E-05 1.7E-09 74.8 30.1 78 344-437 250-334 (398)
72 cd03822 GT1_ecORF704_like This 98.6 9.4E-05 2E-09 72.7 29.9 107 344-473 247-364 (366)
73 PRK14089 ipid-A-disaccharide s 98.6 8.9E-06 1.9E-10 79.0 21.4 101 355-470 230-344 (347)
74 cd04951 GT1_WbdM_like This fam 98.6 3.6E-05 7.8E-10 75.7 26.3 109 344-474 245-358 (360)
75 cd03799 GT1_amsK_like This is 98.6 5.4E-05 1.2E-09 74.3 26.9 92 344-449 236-341 (355)
76 cd03807 GT1_WbnK_like This fam 98.6 0.0004 8.8E-09 67.8 32.2 79 344-438 251-334 (365)
77 cd03811 GT1_WabH_like This fam 98.5 9.5E-05 2.1E-09 71.8 26.7 81 344-438 246-334 (353)
78 cd03805 GT1_ALG2_like This fam 98.5 0.00018 3.8E-09 72.0 28.4 91 344-449 280-378 (392)
79 cd05844 GT1_like_7 Glycosyltra 98.5 0.00014 3E-09 71.9 26.7 92 344-449 245-350 (367)
80 cd03802 GT1_AviGT4_like This f 98.5 0.00023 5E-09 69.3 27.9 105 344-474 224-334 (335)
81 PRK09922 UDP-D-galactose:(gluc 98.4 0.00013 2.7E-09 72.3 24.3 94 344-451 236-342 (359)
82 TIGR03088 stp2 sugar transfera 98.4 0.0013 2.8E-08 65.3 31.6 110 344-474 255-370 (374)
83 cd03812 GT1_CapH_like This fam 98.4 0.00037 8.1E-09 68.5 27.2 80 344-438 249-333 (358)
84 cd04955 GT1_like_6 This family 98.4 0.00058 1.3E-08 67.2 27.9 106 344-474 248-362 (363)
85 PRK15179 Vi polysaccharide bio 98.3 0.0037 8E-08 66.5 32.6 112 344-474 574-691 (694)
86 TIGR03087 stp1 sugar transfera 98.3 0.00056 1.2E-08 68.6 25.5 107 344-473 280-393 (397)
87 cd03809 GT1_mtfB_like This fam 98.2 0.00037 8.1E-09 68.4 22.9 88 344-447 253-348 (365)
88 TIGR02149 glgA_Coryne glycogen 98.2 0.0031 6.6E-08 62.9 29.1 114 346-474 262-384 (388)
89 TIGR02468 sucrsPsyn_pln sucros 98.2 0.0027 5.8E-08 69.5 29.7 95 344-450 548-652 (1050)
90 PRK01021 lpxB lipid-A-disaccha 98.2 0.0007 1.5E-08 69.5 23.9 201 237-471 381-603 (608)
91 KOG3349 Predicted glycosyltran 98.1 1.1E-05 2.3E-10 66.1 7.3 113 271-408 5-128 (170)
92 TIGR02470 sucr_synth sucrose s 98.1 0.023 5.1E-07 60.9 35.0 128 7-136 255-414 (784)
93 PF02684 LpxB: Lipid-A-disacch 98.1 0.0011 2.5E-08 64.9 22.0 106 353-466 253-367 (373)
94 cd03792 GT1_Trehalose_phosphor 98.1 0.0067 1.5E-07 60.2 28.2 109 344-475 252-370 (372)
95 PF02350 Epimerase_2: UDP-N-ac 98.1 2.2E-05 4.8E-10 76.8 10.1 134 267-438 178-320 (346)
96 TIGR03568 NeuC_NnaA UDP-N-acet 98.1 0.00043 9.3E-09 68.5 19.2 130 270-435 202-338 (365)
97 PRK00654 glgA glycogen synthas 97.9 0.0044 9.4E-08 63.7 24.0 82 344-435 337-427 (466)
98 cd04946 GT1_AmsK_like This fam 97.8 0.00096 2.1E-08 67.2 16.4 110 344-471 289-406 (407)
99 PLN00142 sucrose synthase 97.8 0.02 4.4E-07 61.4 26.7 110 27-138 320-439 (815)
100 cd03791 GT1_Glycogen_synthase_ 97.7 0.019 4E-07 59.2 25.3 116 344-475 351-475 (476)
101 TIGR02095 glgA glycogen/starch 97.7 0.052 1.1E-06 55.9 28.3 78 344-435 346-436 (473)
102 PLN02846 digalactosyldiacylgly 97.7 0.076 1.6E-06 53.8 29.2 73 348-437 288-364 (462)
103 PLN02275 transferase, transfer 97.7 0.068 1.5E-06 53.1 30.8 75 344-434 286-371 (371)
104 COG0763 LpxB Lipid A disacchar 97.6 0.027 5.9E-07 54.4 22.2 110 356-475 260-380 (381)
105 PRK15484 lipopolysaccharide 1, 97.6 0.0042 9E-08 62.0 17.1 112 344-475 257-376 (380)
106 PF00534 Glycos_transf_1: Glyc 97.5 0.00066 1.4E-08 59.3 10.0 91 344-448 73-171 (172)
107 PRK15427 colanic acid biosynth 97.5 0.0056 1.2E-07 61.6 17.0 110 344-474 279-403 (406)
108 cd03806 GT1_ALG11_like This fa 97.4 0.2 4.4E-06 50.6 28.2 80 344-438 305-394 (419)
109 cd03804 GT1_wbaZ_like This fam 97.3 0.002 4.3E-08 63.4 11.4 136 273-447 198-339 (351)
110 COG5017 Uncharacterized conser 97.3 0.0022 4.9E-08 51.8 8.6 61 350-414 54-123 (161)
111 PLN02316 synthase/transferase 97.2 0.52 1.1E-05 52.3 33.9 113 344-472 900-1029(1036)
112 COG0381 WecB UDP-N-acetylgluco 97.2 0.21 4.5E-06 48.6 23.1 104 345-471 263-369 (383)
113 PLN02501 digalactosyldiacylgly 97.2 0.44 9.6E-06 50.2 28.0 77 345-438 602-683 (794)
114 PF13844 Glyco_transf_41: Glyc 97.1 0.0046 9.9E-08 62.1 10.9 139 269-438 284-432 (468)
115 PF13692 Glyco_trans_1_4: Glyc 97.0 0.0053 1.2E-07 51.0 9.0 79 344-436 53-135 (135)
116 cd04949 GT1_gtfA_like This fam 96.8 0.021 4.5E-07 56.6 12.9 99 344-453 261-363 (372)
117 PLN02949 transferase, transfer 96.8 0.81 1.7E-05 46.8 31.2 92 344-450 335-438 (463)
118 cd03813 GT1_like_3 This family 96.6 0.13 2.9E-06 52.9 17.6 91 344-448 354-455 (475)
119 cd01635 Glycosyltransferase_GT 96.6 0.4 8.8E-06 43.0 19.1 48 344-393 161-216 (229)
120 PRK09814 beta-1,6-galactofuran 96.3 0.016 3.4E-07 56.7 8.5 110 344-473 207-332 (333)
121 TIGR02918 accessory Sec system 96.1 0.079 1.7E-06 54.7 12.7 102 344-452 376-483 (500)
122 PRK10125 putative glycosyl tra 95.9 2.1 4.6E-05 43.0 28.5 72 344-430 286-365 (405)
123 TIGR02193 heptsyl_trn_I lipopo 95.9 0.8 1.7E-05 44.3 18.2 55 9-70 1-57 (319)
124 COG1817 Uncharacterized protei 95.9 1.6 3.5E-05 41.1 23.3 111 14-142 6-116 (346)
125 PRK15490 Vi polysaccharide bio 95.8 2.9 6.3E-05 43.3 26.9 63 344-414 455-522 (578)
126 PF13579 Glyco_trans_4_4: Glyc 95.7 0.018 3.9E-07 48.9 5.0 95 23-138 6-104 (160)
127 cd04950 GT1_like_1 Glycosyltra 95.6 0.38 8.1E-06 47.8 14.7 78 344-438 254-342 (373)
128 PRK14098 glycogen synthase; Pr 95.2 0.52 1.1E-05 48.6 14.8 81 344-434 362-449 (489)
129 PF13477 Glyco_trans_4_2: Glyc 95.2 0.38 8.2E-06 40.0 11.6 102 9-137 1-106 (139)
130 PHA01633 putative glycosyl tra 95.2 0.92 2E-05 44.1 15.5 86 344-437 201-308 (335)
131 PF06722 DUF1205: Protein of u 95.2 0.021 4.5E-07 44.4 3.2 53 256-308 27-84 (97)
132 PF08660 Alg14: Oligosaccharid 94.7 0.39 8.4E-06 41.8 10.4 120 12-139 2-130 (170)
133 KOG4626 O-linked N-acetylgluco 94.4 0.39 8.4E-06 49.2 10.7 123 269-414 758-889 (966)
134 PRK10017 colanic acid biosynth 94.4 1.8 4E-05 43.6 15.7 85 356-452 323-410 (426)
135 COG3914 Spy Predicted O-linked 92.9 0.6 1.3E-05 47.5 9.1 135 268-430 428-572 (620)
136 PHA01630 putative group 1 glyc 92.8 3.6 7.8E-05 40.1 14.4 110 351-475 197-329 (331)
137 PF13524 Glyco_trans_1_2: Glyc 92.3 1.1 2.4E-05 34.2 8.2 82 369-471 9-91 (92)
138 PF06258 Mito_fiss_Elm1: Mitoc 90.6 9.5 0.00021 36.7 14.3 58 353-414 221-282 (311)
139 PF01975 SurE: Survival protei 90.2 1.4 2.9E-05 39.3 7.6 37 8-46 1-37 (196)
140 PF12000 Glyco_trans_4_3: Gkyc 89.0 4.2 9.1E-05 35.3 9.5 92 33-139 1-97 (171)
141 PLN02939 transferase, transfer 88.1 7.7 0.00017 42.9 12.8 82 344-435 837-930 (977)
142 PRK05986 cob(I)alamin adenolsy 87.7 14 0.00029 32.7 11.9 107 5-120 20-126 (191)
143 PF13439 Glyco_transf_4: Glyco 87.0 3.5 7.6E-05 35.1 8.2 101 17-141 11-112 (177)
144 cd00561 CobA_CobO_BtuR ATP:cor 86.9 18 0.00038 31.0 11.9 103 8-120 3-106 (159)
145 TIGR03713 acc_sec_asp1 accesso 86.7 2.3 4.9E-05 44.2 7.7 91 345-454 410-507 (519)
146 PF04413 Glycos_transf_N: 3-De 86.5 4.3 9.4E-05 35.8 8.4 101 9-138 22-126 (186)
147 PRK03359 putative electron tra 85.5 8.4 0.00018 35.9 10.0 106 16-139 29-148 (256)
148 TIGR02201 heptsyl_trn_III lipo 84.6 41 0.00089 32.7 17.7 106 9-135 1-108 (344)
149 PRK02261 methylaspartate mutas 84.6 3.8 8.2E-05 34.2 6.6 61 5-70 1-61 (137)
150 PRK14099 glycogen synthase; Pr 82.8 39 0.00084 34.9 14.6 38 5-45 1-46 (485)
151 PRK12342 hypothetical protein; 82.3 19 0.00041 33.5 10.9 104 17-138 29-144 (254)
152 COG2109 BtuR ATP:corrinoid ade 81.6 34 0.00074 30.1 11.3 104 6-120 27-133 (198)
153 COG0003 ArsA Predicted ATPase 81.1 18 0.00039 35.0 10.6 42 7-49 1-43 (322)
154 PRK06718 precorrin-2 dehydroge 80.0 20 0.00043 32.1 10.0 146 269-456 11-165 (202)
155 COG0496 SurE Predicted acid ph 79.6 8.1 0.00018 35.6 7.3 97 24-140 16-127 (252)
156 TIGR02919 accessory Sec system 79.0 71 0.0015 32.5 14.6 89 344-448 329-421 (438)
157 PF07355 GRDB: Glycine/sarcosi 78.5 19 0.00041 34.8 9.7 43 93-137 66-118 (349)
158 TIGR02400 trehalose_OtsA alpha 76.5 15 0.00033 37.5 9.2 103 350-475 342-455 (456)
159 cd02067 B12-binding B12 bindin 76.0 7 0.00015 31.5 5.4 37 9-46 1-37 (119)
160 TIGR00715 precor6x_red precorr 75.6 20 0.00043 33.4 8.9 93 8-137 1-99 (256)
161 TIGR01470 cysG_Nterm siroheme 74.3 63 0.0014 29.0 11.6 95 355-456 64-165 (205)
162 COG1618 Predicted nucleotide k 74.2 26 0.00056 30.0 8.2 100 6-118 4-109 (179)
163 cd03789 GT1_LPS_heptosyltransf 73.4 81 0.0018 29.5 21.7 38 9-46 1-39 (279)
164 COG2086 FixA Electron transfer 73.3 32 0.00069 32.1 9.5 104 17-138 31-146 (260)
165 cd00550 ArsA_ATPase Oxyanion-t 73.2 23 0.00049 33.0 8.8 37 9-46 1-38 (254)
166 COG1703 ArgK Putative periplas 72.7 53 0.0012 31.2 10.7 40 6-46 50-89 (323)
167 COG0438 RfaG Glycosyltransfera 71.2 90 0.002 29.2 14.5 81 344-438 257-344 (381)
168 TIGR00708 cobA cob(I)alamin ad 69.3 77 0.0017 27.6 10.9 103 7-120 5-108 (173)
169 PRK02910 light-independent pro 68.8 40 0.00086 35.2 10.2 35 99-137 353-387 (519)
170 PRK05973 replicative DNA helic 68.2 54 0.0012 30.2 9.8 110 10-138 67-191 (237)
171 PF02702 KdpD: Osmosensitive K 68.0 23 0.00049 31.5 6.9 40 6-46 4-43 (211)
172 cd01974 Nitrogenase_MoFe_beta 67.5 62 0.0013 32.9 11.2 36 99-138 368-403 (435)
173 PRK13935 stationary phase surv 67.4 18 0.00039 33.5 6.6 21 24-46 16-36 (253)
174 PF02951 GSH-S_N: Prokaryotic 67.2 11 0.00024 30.5 4.5 38 8-46 1-41 (119)
175 cd03793 GT1_Glycogen_synthase_ 66.9 24 0.00051 36.9 7.9 80 353-437 467-553 (590)
176 cd00532 MGS-like MGS-like doma 66.9 54 0.0012 26.0 8.6 84 20-135 10-104 (112)
177 TIGR02990 ectoine_eutA ectoine 66.8 38 0.00083 31.2 8.6 107 21-141 105-217 (239)
178 PRK10422 lipopolysaccharide co 65.1 1.2E+02 0.0027 29.5 12.6 108 6-135 4-113 (352)
179 PRK10964 ADP-heptose:LPS hepto 65.0 1.3E+02 0.0029 28.8 24.2 38 8-45 1-39 (322)
180 PF02441 Flavoprotein: Flavopr 64.9 12 0.00026 30.7 4.5 37 8-46 1-37 (129)
181 PF02571 CbiJ: Precorrin-6x re 63.8 21 0.00046 33.1 6.4 39 99-138 57-101 (249)
182 cd01981 Pchlide_reductase_B Pc 63.5 54 0.0012 33.2 9.9 36 99-138 361-396 (430)
183 PF03808 Glyco_tran_WecB: Glyc 63.5 88 0.0019 27.1 9.9 97 24-142 37-137 (172)
184 PF04464 Glyphos_transf: CDP-G 63.4 8.7 0.00019 37.9 4.1 115 344-471 252-368 (369)
185 PF01012 ETF: Electron transfe 63.4 54 0.0012 28.0 8.6 98 24-138 20-122 (164)
186 TIGR02398 gluc_glyc_Psyn gluco 63.3 1.9E+02 0.0041 29.9 13.6 108 346-475 364-481 (487)
187 smart00851 MGS MGS-like domain 63.3 61 0.0013 24.4 7.9 79 24-134 2-89 (90)
188 PF02310 B12-binding: B12 bind 62.6 15 0.00032 29.5 4.7 37 8-45 1-37 (121)
189 PRK13933 stationary phase surv 62.0 69 0.0015 29.8 9.3 21 24-46 16-36 (253)
190 CHL00076 chlB photochlorophyll 61.9 67 0.0015 33.4 10.3 36 99-138 365-400 (513)
191 cd01977 Nitrogenase_VFe_alpha 61.9 64 0.0014 32.5 10.0 95 6-136 287-382 (415)
192 PF12146 Hydrolase_4: Putative 61.5 24 0.00052 26.1 5.2 34 7-41 15-48 (79)
193 cd03788 GT1_TPS Trehalose-6-Ph 61.5 16 0.00034 37.5 5.6 104 348-474 345-459 (460)
194 PF06925 MGDG_synth: Monogalac 61.0 26 0.00055 30.2 6.1 43 94-138 76-124 (169)
195 cd01968 Nitrogenase_NifE_I Nit 60.8 78 0.0017 31.8 10.4 34 99-136 347-380 (410)
196 TIGR01278 DPOR_BchB light-inde 59.8 54 0.0012 34.1 9.2 36 99-138 355-390 (511)
197 PRK05647 purN phosphoribosylgl 59.5 1.1E+02 0.0024 27.3 10.0 85 8-116 2-87 (200)
198 PRK10916 ADP-heptose:LPS hepto 59.4 1.5E+02 0.0033 28.8 12.0 104 8-135 1-106 (348)
199 TIGR00725 conserved hypothetic 59.3 26 0.00057 30.0 5.7 42 349-390 78-123 (159)
200 TIGR02195 heptsyl_trn_II lipop 58.6 1.8E+02 0.0039 28.1 22.1 102 9-134 1-104 (334)
201 TIGR01283 nifE nitrogenase mol 58.4 1E+02 0.0022 31.5 10.9 34 99-136 386-419 (456)
202 PRK13931 stationary phase surv 57.8 53 0.0012 30.7 7.9 98 24-138 16-129 (261)
203 PF00551 Formyl_trans_N: Formy 57.5 77 0.0017 27.7 8.6 107 8-139 1-110 (181)
204 PF02572 CobA_CobO_BtuR: ATP:c 57.3 1.2E+02 0.0026 26.4 9.4 104 7-120 3-107 (172)
205 TIGR01284 alt_nitrog_alph nitr 56.8 75 0.0016 32.5 9.5 34 99-136 386-419 (457)
206 KOG2941 Beta-1,4-mannosyltrans 56.8 2E+02 0.0043 28.1 11.4 63 5-73 10-72 (444)
207 PRK08506 replicative DNA helic 56.7 1.1E+02 0.0024 31.4 10.8 36 10-46 195-230 (472)
208 cd01424 MGS_CPS_II Methylglyox 56.2 97 0.0021 24.3 8.7 84 19-135 10-100 (110)
209 PRK14478 nitrogenase molybdenu 56.1 1.1E+02 0.0023 31.6 10.6 33 99-135 384-416 (475)
210 PRK05595 replicative DNA helic 55.7 75 0.0016 32.4 9.3 36 10-46 204-240 (444)
211 PRK06849 hypothetical protein; 55.6 68 0.0015 31.9 8.9 35 6-45 3-37 (389)
212 PRK06321 replicative DNA helic 55.5 62 0.0013 33.3 8.6 36 10-46 229-265 (472)
213 COG2120 Uncharacterized protei 55.1 22 0.00047 32.8 4.9 40 5-46 8-48 (237)
214 TIGR02015 BchY chlorophyllide 54.4 1.5E+02 0.0032 30.1 11.0 93 8-137 286-380 (422)
215 PRK13932 stationary phase surv 53.9 89 0.0019 29.1 8.6 39 5-46 3-41 (257)
216 cd01965 Nitrogenase_MoFe_beta_ 53.5 1.5E+02 0.0032 30.0 11.0 36 99-138 362-397 (428)
217 cd02070 corrinoid_protein_B12- 53.1 43 0.00094 29.9 6.4 60 6-70 81-140 (201)
218 COG4370 Uncharacterized protei 53.0 16 0.00035 34.5 3.6 83 351-448 302-388 (412)
219 COG0541 Ffh Signal recognition 53.0 87 0.0019 31.5 8.7 60 7-69 100-161 (451)
220 PRK06027 purU formyltetrahydro 52.9 1.6E+02 0.0035 27.9 10.5 87 4-117 86-173 (286)
221 cd01121 Sms Sms (bacterial rad 51.7 1.1E+02 0.0025 30.2 9.5 103 10-138 85-208 (372)
222 COG0859 RfaF ADP-heptose:LPS h 51.6 2.4E+02 0.0051 27.4 20.3 106 7-135 1-107 (334)
223 PLN02470 acetolactate synthase 51.6 48 0.001 35.2 7.4 28 362-389 76-109 (585)
224 PRK08305 spoVFB dipicolinate s 51.4 27 0.00058 31.0 4.6 40 6-46 4-43 (196)
225 PRK02155 ppnK NAD(+)/NADH kina 51.2 94 0.002 29.6 8.6 54 360-437 63-120 (291)
226 PRK14099 glycogen synthase; Pr 51.2 23 0.00051 36.5 4.9 83 347-438 354-449 (485)
227 PRK01077 cobyrinic acid a,c-di 50.8 1.4E+02 0.003 30.5 10.3 106 9-140 5-124 (451)
228 PF09314 DUF1972: Domain of un 50.5 1.8E+02 0.0038 25.7 10.2 48 18-72 16-64 (185)
229 cd03466 Nitrogenase_NifN_2 Nit 50.4 1.2E+02 0.0027 30.6 9.9 35 99-137 363-397 (429)
230 TIGR01862 N2-ase-Ialpha nitrog 50.2 1.1E+02 0.0023 31.2 9.4 34 99-136 378-411 (443)
231 PRK10490 sensor protein KdpD; 50.1 78 0.0017 35.6 9.1 40 6-46 23-62 (895)
232 PRK09165 replicative DNA helic 49.8 85 0.0018 32.5 8.7 36 10-46 220-270 (497)
233 cd01425 RPS2 Ribosomal protein 49.5 1.4E+02 0.003 26.5 8.9 33 109-141 127-161 (193)
234 PRK14477 bifunctional nitrogen 49.5 1.4E+02 0.0029 33.8 10.7 36 99-138 380-415 (917)
235 TIGR00639 PurN phosphoribosylg 48.8 1.9E+02 0.0041 25.5 11.1 85 8-117 1-87 (190)
236 PLN03063 alpha,alpha-trehalose 48.4 46 0.001 36.7 6.8 99 356-475 371-476 (797)
237 TIGR00460 fmt methionyl-tRNA f 48.3 1.6E+02 0.0035 28.3 9.9 33 8-46 1-33 (313)
238 PRK11823 DNA repair protein Ra 48.1 1.2E+02 0.0026 30.9 9.4 103 10-138 83-206 (446)
239 PF04127 DFP: DNA / pantothena 48.1 19 0.00041 31.7 3.2 38 7-45 3-52 (185)
240 TIGR02370 pyl_corrinoid methyl 48.1 58 0.0013 28.9 6.4 60 6-70 83-142 (197)
241 PRK08760 replicative DNA helic 48.0 1.1E+02 0.0023 31.6 9.0 36 10-46 232-268 (476)
242 TIGR02655 circ_KaiC circadian 47.8 1.8E+02 0.0039 30.0 10.8 115 10-140 266-399 (484)
243 TIGR03600 phage_DnaB phage rep 47.8 1.8E+02 0.004 29.3 10.7 36 10-46 197-233 (421)
244 PF00448 SRP54: SRP54-type pro 47.4 46 0.001 29.6 5.6 58 10-70 4-63 (196)
245 TIGR03878 thermo_KaiC_2 KaiC d 46.8 1.3E+02 0.0029 28.0 8.8 38 10-48 39-76 (259)
246 PRK13934 stationary phase surv 46.7 1.7E+02 0.0038 27.4 9.3 23 22-46 14-36 (266)
247 COG0801 FolK 7,8-dihydro-6-hyd 46.6 40 0.00087 28.8 4.7 33 271-303 3-35 (160)
248 COG2185 Sbm Methylmalonyl-CoA 45.9 36 0.00078 28.5 4.2 41 5-46 10-50 (143)
249 PRK13011 formyltetrahydrofolat 45.6 2.7E+02 0.0058 26.5 10.7 105 5-136 87-193 (286)
250 cd02071 MM_CoA_mut_B12_BD meth 45.2 36 0.00078 27.5 4.2 39 9-48 1-39 (122)
251 COG0552 FtsY Signal recognitio 44.8 1.7E+02 0.0037 28.3 9.1 89 7-117 139-229 (340)
252 cd00984 DnaB_C DnaB helicase C 44.4 2.5E+02 0.0053 25.5 10.6 36 10-46 16-52 (242)
253 COG0052 RpsB Ribosomal protein 43.8 2.5E+02 0.0053 26.0 9.5 34 109-142 156-191 (252)
254 KOG0853 Glycosyltransferase [C 43.8 36 0.00079 34.8 4.7 60 368-438 376-435 (495)
255 PHA02542 41 41 helicase; Provi 43.1 1.4E+02 0.0031 30.7 8.9 36 10-46 193-228 (473)
256 PF05225 HTH_psq: helix-turn-h 42.7 41 0.00088 21.8 3.3 25 422-449 1-26 (45)
257 cd01452 VWA_26S_proteasome_sub 42.5 1.8E+02 0.0038 25.7 8.3 63 8-71 108-174 (187)
258 PF02585 PIG-L: GlcNAc-PI de-N 42.4 1.4E+02 0.003 24.1 7.4 17 99-116 91-107 (128)
259 PF05159 Capsule_synth: Capsul 42.3 1.3E+02 0.0029 28.0 8.2 42 345-389 184-225 (269)
260 TIGR01286 nifK nitrogenase mol 42.0 2.1E+02 0.0045 29.9 10.0 35 99-137 428-462 (515)
261 TIGR00347 bioD dethiobiotin sy 42.0 1.8E+02 0.004 24.5 8.5 28 14-42 5-32 (166)
262 PRK08006 replicative DNA helic 41.8 1.8E+02 0.0039 29.9 9.5 57 10-69 227-284 (471)
263 PRK13789 phosphoribosylamine-- 41.7 1.1E+02 0.0024 30.9 8.0 32 7-44 4-35 (426)
264 PRK10867 signal recognition pa 41.5 1.4E+02 0.003 30.3 8.5 38 8-46 101-139 (433)
265 PRK06904 replicative DNA helic 41.3 1.2E+02 0.0025 31.3 8.1 57 10-69 224-281 (472)
266 TIGR01860 VNFD nitrogenase van 41.1 2.7E+02 0.0058 28.6 10.7 30 101-134 390-419 (461)
267 PRK07773 replicative DNA helic 40.7 1.4E+02 0.0031 33.4 9.3 36 10-46 220-256 (886)
268 TIGR00379 cobB cobyrinic acid 40.7 2.3E+02 0.005 28.9 10.1 105 10-140 2-120 (449)
269 cd01141 TroA_d Periplasmic bin 40.5 45 0.00097 29.0 4.4 37 99-137 61-99 (186)
270 PRK06749 replicative DNA helic 40.3 1.3E+02 0.0029 30.4 8.2 36 10-46 189-224 (428)
271 COG1797 CobB Cobyrinic acid a, 40.2 1.8E+02 0.0039 29.3 8.7 108 9-143 2-124 (451)
272 cd02069 methionine_synthase_B1 39.6 95 0.0021 28.0 6.4 60 6-70 87-146 (213)
273 PF01075 Glyco_transf_9: Glyco 39.3 1.4E+02 0.003 27.2 7.8 96 269-388 105-208 (247)
274 KOG0832 Mitochondrial/chloropl 39.2 28 0.00061 31.4 2.8 114 17-141 90-207 (251)
275 COG2910 Putative NADH-flavin r 38.8 57 0.0012 28.7 4.4 33 8-45 1-33 (211)
276 PRK05636 replicative DNA helic 38.3 2.3E+02 0.005 29.5 9.7 36 10-46 268-304 (505)
277 TIGR03880 KaiC_arch_3 KaiC dom 38.1 1.4E+02 0.0031 26.8 7.5 100 10-120 19-118 (224)
278 COG3660 Predicted nucleoside-d 38.0 3.5E+02 0.0075 25.4 18.8 38 350-388 234-271 (329)
279 PRK02797 4-alpha-L-fucosyltran 37.5 65 0.0014 30.8 5.0 78 348-435 211-293 (322)
280 TIGR01425 SRP54_euk signal rec 37.3 1.3E+02 0.0029 30.4 7.5 38 8-46 101-138 (429)
281 TIGR00665 DnaB replicative DNA 37.3 3.7E+02 0.0079 27.2 11.0 36 10-46 198-234 (434)
282 TIGR01917 gly_red_sel_B glycin 37.2 55 0.0012 32.6 4.7 45 91-137 60-114 (431)
283 TIGR01918 various_sel_PB selen 37.1 56 0.0012 32.6 4.7 47 365-414 347-395 (431)
284 TIGR00416 sms DNA repair prote 37.0 1.9E+02 0.0042 29.5 8.9 102 10-137 97-219 (454)
285 KOG2836 Protein tyrosine phosp 37.0 2.4E+02 0.0052 23.3 8.7 58 5-72 14-71 (173)
286 TIGR01861 ANFD nitrogenase iro 37.0 3.1E+02 0.0068 28.5 10.4 31 102-136 392-422 (513)
287 COG2894 MinD Septum formation 36.9 1.3E+02 0.0028 27.4 6.5 37 9-46 3-41 (272)
288 PRK10637 cysG siroheme synthas 36.3 2.6E+02 0.0057 28.6 9.8 92 355-456 67-168 (457)
289 cd01840 SGNH_hydrolase_yrhL_li 36.3 96 0.0021 25.9 5.7 37 269-306 51-87 (150)
290 PRK06249 2-dehydropantoate 2-r 36.3 53 0.0011 31.6 4.5 35 5-45 3-37 (313)
291 COG2159 Predicted metal-depend 36.0 3E+02 0.0066 26.2 9.5 69 240-308 99-167 (293)
292 PRK04885 ppnK inorganic polyph 35.5 74 0.0016 29.9 5.1 54 360-437 35-94 (265)
293 PRK09620 hypothetical protein; 35.4 58 0.0013 29.8 4.4 39 6-45 2-52 (229)
294 PRK14098 glycogen synthase; Pr 35.2 61 0.0013 33.5 5.0 39 5-46 3-49 (489)
295 PF02374 ArsA_ATPase: Anion-tr 35.0 46 0.001 32.0 3.8 38 8-46 1-39 (305)
296 cd07038 TPP_PYR_PDC_IPDC_like 35.0 78 0.0017 27.1 4.9 26 365-390 62-93 (162)
297 cd01122 GP4d_helicase GP4d_hel 34.9 1E+02 0.0022 28.7 6.2 37 9-46 32-69 (271)
298 PRK10916 ADP-heptose:LPS hepto 34.9 2.5E+02 0.0054 27.3 9.2 35 99-138 254-288 (348)
299 PRK12311 rpsB 30S ribosomal pr 34.8 2.1E+02 0.0045 27.8 8.1 33 109-141 152-186 (326)
300 PRK07414 cob(I)yrinic acid a,c 34.8 3.1E+02 0.0068 24.0 11.4 106 7-120 21-126 (178)
301 KOG0081 GTPase Rab27, small G 34.7 1E+02 0.0022 26.3 5.1 44 99-142 108-167 (219)
302 PRK08840 replicative DNA helic 34.7 2.7E+02 0.0059 28.6 9.5 57 10-69 220-277 (464)
303 cd06533 Glyco_transf_WecG_TagA 34.6 3E+02 0.0065 23.7 9.1 91 24-135 35-129 (171)
304 PRK10422 lipopolysaccharide co 34.5 1.4E+02 0.0031 29.1 7.4 98 269-388 183-287 (352)
305 PRK00771 signal recognition pa 34.5 3.4E+02 0.0073 27.6 10.0 39 7-46 95-133 (437)
306 cd01985 ETF The electron trans 34.3 3.1E+02 0.0067 23.7 9.9 39 99-138 82-123 (181)
307 PRK06067 flagellar accessory p 34.2 1.4E+02 0.003 27.2 6.8 36 10-46 28-63 (234)
308 PF00731 AIRC: AIR carboxylase 34.0 2.9E+02 0.0063 23.4 11.2 138 272-455 3-148 (150)
309 PRK11519 tyrosine kinase; Prov 34.0 3.6E+02 0.0079 29.5 10.9 39 7-46 525-565 (719)
310 PRK06276 acetolactate synthase 33.7 1.3E+02 0.0028 31.9 7.3 27 363-389 64-96 (586)
311 PRK05920 aromatic acid decarbo 33.4 66 0.0014 28.8 4.3 39 6-46 2-40 (204)
312 cd07025 Peptidase_S66 LD-Carbo 33.0 89 0.0019 29.6 5.4 29 281-309 45-73 (282)
313 PRK06732 phosphopantothenate-- 32.9 54 0.0012 30.0 3.7 31 12-45 19-49 (229)
314 PRK05748 replicative DNA helic 32.8 2.6E+02 0.0057 28.4 9.2 36 10-46 206-242 (448)
315 TIGR02852 spore_dpaB dipicolin 32.4 64 0.0014 28.5 3.9 38 8-46 1-38 (187)
316 PLN02939 transferase, transfer 32.3 81 0.0018 35.3 5.4 39 5-46 479-525 (977)
317 cd00672 CysRS_core catalytic c 32.1 3.6E+02 0.0079 24.2 8.9 91 16-133 34-129 (213)
318 PF09334 tRNA-synt_1g: tRNA sy 32.0 45 0.00097 33.3 3.3 33 18-51 16-51 (391)
319 COG1090 Predicted nucleoside-d 31.8 4.4E+02 0.0096 24.9 9.3 25 26-51 13-37 (297)
320 PF13167 GTP-bdg_N: GTP-bindin 31.7 1.1E+02 0.0024 23.6 4.7 35 99-134 48-84 (95)
321 PRK08322 acetolactate synthase 31.5 1.5E+02 0.0032 31.1 7.3 27 363-389 64-96 (547)
322 PRK06932 glycerate dehydrogena 31.5 1.3E+02 0.0027 29.1 6.2 28 269-303 148-175 (314)
323 PF01210 NAD_Gly3P_dh_N: NAD-d 31.5 36 0.00077 29.0 2.2 31 9-45 1-31 (157)
324 PRK11889 flhF flagellar biosyn 31.2 5.7E+02 0.012 25.8 12.4 39 7-46 241-279 (436)
325 PRK00090 bioD dithiobiotin syn 31.0 3.7E+02 0.0081 24.0 9.1 33 10-43 2-35 (222)
326 KOG3339 Predicted glycosyltran 30.9 1.6E+02 0.0035 25.8 5.9 26 9-35 40-65 (211)
327 cd01423 MGS_CPS_I_III Methylgl 30.8 2.7E+02 0.0059 22.0 8.1 94 12-135 4-106 (116)
328 PRK00784 cobyric acid synthase 30.5 5.3E+02 0.011 26.6 10.9 35 9-44 4-39 (488)
329 PRK14501 putative bifunctional 30.4 55 0.0012 35.8 3.9 111 347-475 345-461 (726)
330 cd01124 KaiC KaiC is a circadi 30.3 1.6E+02 0.0036 25.2 6.4 36 10-46 2-37 (187)
331 PRK07004 replicative DNA helic 30.1 5E+02 0.011 26.6 10.6 36 10-46 216-252 (460)
332 COG3195 Uncharacterized protei 30.0 1.6E+02 0.0035 25.2 5.6 93 353-452 64-162 (176)
333 PRK12475 thiamine/molybdopteri 29.8 4E+02 0.0087 26.0 9.4 31 6-42 23-54 (338)
334 PRK01231 ppnK inorganic polyph 29.5 3.4E+02 0.0073 25.9 8.6 54 360-437 62-119 (295)
335 PF08323 Glyco_transf_5: Starc 29.5 48 0.001 30.6 2.9 22 24-46 22-43 (245)
336 TIGR00696 wecB_tagA_cpsF bacte 29.3 3.8E+02 0.0083 23.3 8.8 75 24-120 37-111 (177)
337 COG0859 RfaF ADP-heptose:LPS h 29.3 4.4E+02 0.0094 25.5 9.7 100 8-140 176-280 (334)
338 PF06564 YhjQ: YhjQ protein; 29.3 4.6E+02 0.01 24.2 11.5 36 9-45 3-39 (243)
339 PRK15469 ghrA bifunctional gly 29.2 3.1E+02 0.0068 26.4 8.5 28 269-303 137-164 (312)
340 PRK07313 phosphopantothenoylcy 29.0 77 0.0017 27.8 3.9 37 8-46 2-38 (182)
341 TIGR01689 EcbF-BcbF capsule bi 28.9 1.7E+02 0.0037 23.9 5.6 23 23-46 28-50 (126)
342 PRK14077 pnk inorganic polypho 28.9 1.2E+02 0.0026 28.9 5.4 55 359-437 63-121 (287)
343 cd01976 Nitrogenase_MoFe_alpha 28.9 72 0.0016 32.2 4.2 35 99-137 360-394 (421)
344 PF01497 Peripla_BP_2: Peripla 28.8 78 0.0017 28.6 4.2 37 103-140 55-93 (238)
345 PF07429 Glyco_transf_56: 4-al 28.7 1.2E+02 0.0025 29.6 5.2 82 344-435 245-332 (360)
346 cd00861 ProRS_anticodon_short 28.6 1E+02 0.0022 23.1 4.2 36 7-43 1-38 (94)
347 PRK07710 acetolactate synthase 28.5 1.5E+02 0.0033 31.3 6.8 27 363-389 79-111 (571)
348 TIGR02201 heptsyl_trn_III lipo 28.3 5.5E+02 0.012 24.8 11.8 35 99-138 253-287 (344)
349 PRK13982 bifunctional SbtC-lik 28.3 77 0.0017 32.5 4.3 41 5-46 254-306 (475)
350 cd01147 HemV-2 Metal binding p 28.2 92 0.002 28.7 4.6 38 99-138 66-106 (262)
351 TIGR00715 precor6x_red precorr 28.1 99 0.0021 28.8 4.7 39 99-138 188-231 (256)
352 COG2179 Predicted hydrolase of 27.8 1.7E+02 0.0036 25.3 5.4 88 24-140 51-141 (175)
353 PLN02929 NADH kinase 27.7 98 0.0021 29.6 4.6 67 359-437 63-138 (301)
354 cd07062 Peptidase_S66_mccF_lik 27.6 1.1E+02 0.0025 29.3 5.2 29 281-309 49-77 (308)
355 TIGR01279 DPOR_bchN light-inde 27.6 3.7E+02 0.008 27.0 9.0 34 6-45 273-306 (407)
356 COG2099 CobK Precorrin-6x redu 27.5 1.1E+02 0.0024 28.3 4.7 39 99-138 187-230 (257)
357 PF01993 MTD: methylene-5,6,7, 27.3 1.2E+02 0.0026 27.7 4.7 41 99-140 50-96 (276)
358 PF04244 DPRP: Deoxyribodipyri 27.1 60 0.0013 29.6 3.0 26 20-46 47-72 (224)
359 cd01143 YvrC Periplasmic bindi 27.1 1.1E+02 0.0023 26.6 4.7 38 99-138 52-90 (195)
360 PTZ00393 protein tyrosine phos 27.0 4.3E+02 0.0092 24.4 8.3 59 5-73 89-147 (241)
361 PRK13236 nitrogenase reductase 26.9 1.2E+02 0.0025 29.0 5.1 42 4-46 2-44 (296)
362 PF02780 Transketolase_C: Tran 26.6 1.2E+02 0.0025 24.5 4.4 37 6-45 8-44 (124)
363 COG2327 WcaK Polysaccharide py 26.6 2.1E+02 0.0045 28.5 6.7 72 355-438 280-352 (385)
364 PF02776 TPP_enzyme_N: Thiamin 26.1 1.7E+02 0.0037 25.1 5.6 26 365-390 67-98 (172)
365 COG1484 DnaC DNA replication p 25.9 1.1E+02 0.0025 28.4 4.7 38 7-45 105-142 (254)
366 TIGR00959 ffh signal recogniti 25.9 3.4E+02 0.0074 27.5 8.3 37 9-46 101-138 (428)
367 TIGR00173 menD 2-succinyl-5-en 25.9 4.9E+02 0.011 26.3 9.7 25 364-388 65-95 (432)
368 PRK05784 phosphoribosylamine-- 25.8 4.4E+02 0.0095 27.2 9.3 30 8-43 1-32 (486)
369 PF05728 UPF0227: Uncharacteri 25.7 1.5E+02 0.0033 26.1 5.2 41 99-140 48-91 (187)
370 PRK01911 ppnK inorganic polyph 25.5 1.5E+02 0.0033 28.2 5.5 55 359-437 63-121 (292)
371 PLN02695 GDP-D-mannose-3',5'-e 25.4 1.4E+02 0.0029 29.5 5.4 35 5-44 19-53 (370)
372 PRK13604 luxD acyl transferase 25.4 1.3E+02 0.0029 28.9 5.0 35 7-42 36-70 (307)
373 PRK12446 undecaprenyldiphospho 25.4 1.1E+02 0.0023 30.1 4.6 26 361-388 92-120 (352)
374 COG2205 KdpD Osmosensitive K+ 25.1 3.4E+02 0.0073 29.9 8.2 41 5-46 20-60 (890)
375 PF10649 DUF2478: Protein of u 25.1 4.4E+02 0.0095 22.6 11.3 116 13-141 4-134 (159)
376 COG2099 CobK Precorrin-6x redu 25.0 1.1E+02 0.0024 28.3 4.2 39 99-138 57-101 (257)
377 PF10087 DUF2325: Uncharacteri 25.0 1.1E+02 0.0024 23.5 3.8 40 100-142 42-87 (97)
378 COG1748 LYS9 Saccharopine dehy 25.0 6.6E+02 0.014 25.1 9.9 33 8-45 2-34 (389)
379 PRK07206 hypothetical protein; 24.8 2.7E+02 0.0058 27.9 7.6 33 99-132 61-95 (416)
380 TIGR00730 conserved hypothetic 24.7 3.6E+02 0.0078 23.5 7.3 35 355-389 90-133 (178)
381 PRK11199 tyrA bifunctional cho 24.7 6.4E+02 0.014 24.9 10.0 33 7-45 98-131 (374)
382 PLN02935 Bifunctional NADH kin 24.7 1.4E+02 0.0029 30.8 5.2 55 359-437 261-319 (508)
383 PRK04148 hypothetical protein; 24.7 97 0.0021 25.7 3.5 33 6-45 16-48 (134)
384 TIGR02195 heptsyl_trn_II lipop 24.6 6.3E+02 0.014 24.2 12.0 99 8-138 175-278 (334)
385 TIGR02853 spore_dpaA dipicolin 24.5 2.3E+02 0.0051 26.9 6.6 102 23-136 12-119 (287)
386 PRK12744 short chain dehydroge 24.4 2.1E+02 0.0046 26.1 6.3 40 1-44 1-40 (257)
387 COG3349 Uncharacterized conser 24.3 79 0.0017 32.3 3.5 32 8-45 1-32 (485)
388 PF10933 DUF2827: Protein of u 24.2 1.6E+02 0.0035 28.7 5.4 73 360-453 270-348 (364)
389 PRK14092 2-amino-4-hydroxy-6-h 23.9 1.7E+02 0.0036 25.2 4.9 29 269-297 7-35 (163)
390 PF07991 IlvN: Acetohydroxy ac 23.8 97 0.0021 26.6 3.4 35 6-46 3-37 (165)
391 PRK05562 precorrin-2 dehydroge 23.7 5.6E+02 0.012 23.3 10.0 88 357-455 82-179 (223)
392 COG1066 Sms Predicted ATP-depe 23.7 2.1E+02 0.0046 28.7 6.1 102 10-138 96-218 (456)
393 PRK08155 acetolactate synthase 23.6 2.7E+02 0.0058 29.4 7.5 25 365-389 79-109 (564)
394 PRK06487 glycerate dehydrogena 23.3 2.2E+02 0.0048 27.4 6.3 29 269-304 149-177 (317)
395 TIGR00345 arsA arsenite-activa 23.3 4.1E+02 0.0089 25.1 8.0 23 25-48 3-25 (284)
396 TIGR01285 nifN nitrogenase mol 23.2 1.4E+02 0.0031 30.2 5.2 35 99-137 364-398 (432)
397 cd01980 Chlide_reductase_Y Chl 23.2 1.3E+02 0.0028 30.4 4.8 32 102-137 344-375 (416)
398 PF05693 Glycogen_syn: Glycoge 23.1 1.3E+02 0.0028 31.7 4.8 33 116-148 151-183 (633)
399 TIGR03446 mycothiol_Mca mycoth 23.1 3.6E+02 0.0077 25.6 7.4 16 99-115 112-127 (283)
400 PLN02240 UDP-glucose 4-epimera 23.1 1.3E+02 0.0027 29.2 4.7 34 5-43 3-36 (352)
401 PRK12825 fabG 3-ketoacyl-(acyl 23.0 3.1E+02 0.0067 24.5 7.1 36 6-46 5-40 (249)
402 PRK12828 short chain dehydroge 23.0 1.6E+02 0.0036 26.3 5.2 40 1-45 1-40 (239)
403 PRK02649 ppnK inorganic polyph 22.8 1.7E+02 0.0036 28.2 5.2 55 359-437 67-125 (305)
404 TIGR03445 mycothiol_MshB 1D-my 22.5 3.1E+02 0.0067 26.0 6.9 16 99-115 114-129 (284)
405 cd07037 TPP_PYR_MenD Pyrimidin 22.5 75 0.0016 27.3 2.6 26 365-390 63-94 (162)
406 PHA02754 hypothetical protein; 22.4 1.1E+02 0.0024 20.9 2.7 25 429-456 6-30 (67)
407 PRK03378 ppnK inorganic polyph 22.4 1.7E+02 0.0037 27.9 5.2 55 359-437 62-120 (292)
408 TIGR01012 Sa_S2_E_A ribosomal 22.3 67 0.0015 28.5 2.3 33 109-141 108-142 (196)
409 TIGR01007 eps_fam capsular exo 22.2 1.6E+02 0.0035 26.0 4.9 38 7-45 16-55 (204)
410 COG2874 FlaH Predicted ATPases 22.1 1.5E+02 0.0032 26.9 4.3 29 17-46 38-66 (235)
411 PRK13234 nifH nitrogenase redu 22.1 1.5E+02 0.0033 28.2 4.9 40 6-46 2-42 (295)
412 PF00282 Pyridoxal_deC: Pyrido 22.1 1E+02 0.0022 30.5 3.8 71 363-436 104-191 (373)
413 PRK13010 purU formyltetrahydro 22.0 6.9E+02 0.015 23.8 10.3 58 368-434 204-263 (289)
414 TIGR01501 MthylAspMutase methy 21.9 3.1E+02 0.0067 22.7 5.9 39 7-46 1-39 (134)
415 PRK06522 2-dehydropantoate 2-r 21.9 1.1E+02 0.0024 28.9 4.0 31 8-44 1-31 (304)
416 PRK14619 NAD(P)H-dependent gly 21.9 1.1E+02 0.0023 29.5 3.8 34 6-45 3-36 (308)
417 PRK04020 rps2P 30S ribosomal p 21.7 76 0.0016 28.4 2.5 33 109-141 114-148 (204)
418 cd02034 CooC The accessory pro 21.6 2E+02 0.0043 23.0 4.7 37 9-46 1-37 (116)
419 cd01075 NAD_bind_Leu_Phe_Val_D 21.6 1.6E+02 0.0034 26.3 4.6 33 4-42 25-57 (200)
420 cd02065 B12-binding_like B12 b 21.4 1.4E+02 0.0031 23.6 4.0 35 10-45 2-36 (125)
421 cd00764 Eukaryotic_PFK Phospho 21.4 2.4E+02 0.0052 30.9 6.5 119 3-136 385-514 (762)
422 PRK04539 ppnK inorganic polyph 21.4 1.9E+02 0.0042 27.6 5.3 55 359-437 67-125 (296)
423 PF07015 VirC1: VirC1 protein; 21.3 2.6E+02 0.0056 25.6 5.8 45 10-55 4-49 (231)
424 TIGR00147 lipid kinase, YegS/R 21.3 3.7E+02 0.0081 25.3 7.4 26 365-390 60-91 (293)
425 COG0297 GlgA Glycogen synthase 21.3 3E+02 0.0066 28.4 7.0 88 369-472 380-473 (487)
426 PRK06222 ferredoxin-NADP(+) re 20.9 2E+02 0.0043 27.1 5.4 36 8-46 99-134 (281)
427 CHL00072 chlL photochlorophyll 20.9 1.7E+02 0.0037 27.8 4.9 38 8-46 1-38 (290)
428 PF13450 NAD_binding_8: NAD(P) 20.7 1.2E+02 0.0026 21.5 2.9 20 25-45 9-28 (68)
429 COG0678 AHP1 Peroxiredoxin [Po 20.6 3E+02 0.0066 23.3 5.5 39 5-43 35-80 (165)
430 COG0143 MetG Methionyl-tRNA sy 20.6 1.3E+02 0.0028 31.6 4.3 44 7-51 4-57 (558)
431 PRK03372 ppnK inorganic polyph 20.6 1.9E+02 0.0041 27.8 5.1 55 359-437 71-129 (306)
432 COG1435 Tdk Thymidine kinase [ 20.5 6.2E+02 0.013 22.6 7.9 34 11-45 8-41 (201)
433 PRK00039 ruvC Holliday junctio 20.5 2.6E+02 0.0056 24.0 5.5 46 92-139 46-106 (164)
434 PRK07525 sulfoacetaldehyde ace 20.4 7.5E+02 0.016 26.2 10.1 27 363-389 69-101 (588)
435 TIGR01281 DPOR_bchL light-inde 20.4 1.6E+02 0.0035 27.3 4.7 38 8-46 1-38 (268)
436 COG2433 Uncharacterized conser 20.4 5E+02 0.011 27.4 8.1 29 88-117 162-191 (652)
437 PRK12743 oxidoreductase; Provi 20.3 3.4E+02 0.0074 24.7 6.8 33 9-45 3-35 (256)
438 PRK02842 light-independent pro 20.2 6E+02 0.013 25.7 9.0 33 7-45 290-323 (427)
439 TIGR00421 ubiX_pad polyprenyl 20.1 1.2E+02 0.0025 26.7 3.3 36 9-46 1-36 (181)
No 1
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=6.2e-70 Score=543.61 Aligned_cols=457 Identities=44% Similarity=0.813 Sum_probs=351.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHH-hcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCC-CCCch
Q 046326 7 QPHVAVLPSPGLGHLIPLLEFAKRLV-LNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTS-DDMPV 84 (476)
Q Consensus 7 ~~rIll~~~p~~GHi~P~l~La~~L~-~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 84 (476)
+.||+++|+|++||++||+.||+.|+ .+| ++|||++++ .|...+.......+ +++++.++.+..+++ + .+.+.
T Consensus 5 ~pHVvl~P~paqGHi~P~l~LAk~La~~~g-~~vT~v~t~--~n~~~~~~~~~~~~-~i~~~~lp~p~~~gl-p~~~~~~ 79 (481)
T PLN02992 5 KPHAAMFSSPGMGHVIPVIELGKRLSANHG-FHVTVFVLE--TDAASAQSKFLNST-GVDIVGLPSPDISGL-VDPSAHV 79 (481)
T ss_pred CcEEEEeCCcccchHHHHHHHHHHHHhCCC-cEEEEEeCC--CchhhhhhccccCC-CceEEECCCccccCC-CCCCccH
Confidence 57999999999999999999999998 788 999999977 45443322111112 699999998665555 4 33333
Q ss_pred HHHHHHHHHHhhcHHHHHHHHhcC-CCCEEEECCCcchHHHHHHHcCCCeEEEecccHHHHHHHhhcccccccccCCCCC
Q 046326 85 VTRLHAIVEESLSKSLKSVLTELC-NPNALVIDLFCTQAFEICSQLSIPTYSFVTTSVHFFAFITYLPTLDHEVQGEFVD 163 (476)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~l~~~~-~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 163 (476)
...+........+ .+++++++.. +|+|||+|.+++|+.++|+++|||++.|++++++.++.+.++|........+...
T Consensus 80 ~~~~~~~~~~~~~-~~~~~l~~~~~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~ 158 (481)
T PLN02992 80 VTKIGVIMREAVP-TLRSKIAEMHQKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDIKEEHTV 158 (481)
T ss_pred HHHHHHHHHHhHH-HHHHHHHhcCCCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhcccccccccc
Confidence 3334444445566 8888888754 7899999999999999999999999999999998888777666432221111111
Q ss_pred CCCCccCCCCCCCCccccCcccccCChhHHHHHHHHhhccCCCcEEEEcCccccchhHHHHhhhcccCCCCCCCCeEeec
Q 046326 164 LPEPIKIPGCPPVRPEDLLDQVRNRKIDEYKFFLLHVSRLPLAAGIFLNSWENLEFVPLKAIGEHSFYLQIPTPPINPIG 243 (476)
Q Consensus 164 ~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~p~~~~vG 243 (476)
...+..+||+++++..+++..+.......+..+.+......+.+++++|||++||+.++.++.+....++..-++++.||
T Consensus 159 ~~~~~~iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v~~VG 238 (481)
T PLN02992 159 QRKPLAMPGCEPVRFEDTLDAYLVPDEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPVYPIG 238 (481)
T ss_pred CCCCcccCCCCccCHHHhhHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhccccccccCCceEEec
Confidence 11245578888888888876544443344566666667778889999999999999999888653100110115699999
Q ss_pred CCCCCCCCCCCChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEEecCCCCCccccccccCCC
Q 046326 244 PLIKQDEPLSASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQRFIWVVRMPSDASASATFFNVGSD 323 (476)
Q Consensus 244 pl~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 323 (476)
|+++..... ..+++|.+|||++++++||||||||+...+.+++.+++.+|+.++++|||+++...+.+...-.++...+
T Consensus 239 Pl~~~~~~~-~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~~~~~~~~ 317 (481)
T PLN02992 239 PLCRPIQSS-KTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGG 317 (481)
T ss_pred CccCCcCCC-cchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccccccccccCccc
Confidence 997642211 2356799999999888999999999999999999999999999999999999743110000000000000
Q ss_pred --CCCCCCCCChhHHHhhhcCCCCeEeccccchHHhhccCCccceecccCchHHHHHHhcCCcEeeccccchhhhhhhhh
Q 046326 324 --VNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLYAEQRMNAAML 401 (476)
Q Consensus 324 --~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~ 401 (476)
.++....+|++|.++++. +|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++
T Consensus 318 ~~~~~~~~~lp~~f~eR~~~--rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~ 395 (481)
T PLN02992 318 ETRDNTPEYLPEGFVSRTHD--RGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALL 395 (481)
T ss_pred ccccchhhhCCHHHHHHhcC--CCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCccchhHHHHHHH
Confidence 001123589999999988 9999999999999999999999999999999999999999999999999999999998
Q ss_pred cceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhc--cCCChHHHHHHHHHHhh
Q 046326 402 TAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELG--DGGSSSDSLASFIKKCK 475 (476)
Q Consensus 402 ~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~--~~g~~~~~~~~~~~~~~ 475 (476)
++++|+|+.++. . ++.++.++|+++|+++|.+++++.+|++++++++++++|+. +||||.+++++||++++
T Consensus 396 -~~~~g~gv~~~~-~-~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~~~~ 468 (481)
T PLN02992 396 -SDELGIAVRSDD-P-KEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTKECQ 468 (481)
T ss_pred -HHHhCeeEEecC-C-CCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHH
Confidence 348999999975 1 13589999999999999887788899999999999999994 69999999999999875
No 2
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=5.8e-69 Score=533.47 Aligned_cols=460 Identities=41% Similarity=0.768 Sum_probs=351.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhc-CCcEEEEEEccCCcchhhhhhhhhcC-C-CCceEEEcCCCCCCCCCCCC
Q 046326 5 SLQPHVAVLPSPGLGHLIPLLEFAKRLVLN-HGVHVSFLVITTNEASAAKNNLLRSL-P-HGLDVVDLPPVDVSAVTSDD 81 (476)
Q Consensus 5 ~~~~rIll~~~p~~GHi~P~l~La~~L~~r-G~h~V~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~ 81 (476)
|.+.||+++|+|++||++||+.||+.|+.+ | ..|||+++....+...-....... + .+++++.++.+..+++-+.+
T Consensus 1 ~~~pHvvl~P~p~qGHi~P~l~LAk~La~~~g-~~vT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~l~~~~ 79 (470)
T PLN03015 1 MDQPHALLVASPGLGHLIPILELGNRLSSVLN-IHVTILAVTSGSSSPTETEAIHAAAARTTCQITEIPSVDVDNLVEPD 79 (470)
T ss_pred CCCcEEEEECCcccccHHHHHHHHHHHHhCCC-CeEEEEECCCchhhhccccccccccCCCceEEEECCCCccccCCCCC
Confidence 457799999999999999999999999987 8 999999877522211001111211 1 15999999976554430222
Q ss_pred CchHHHHHHHHHHhhcHHHHHHHHhcC-CCCEEEECCCcchHHHHHHHcCCC-eEEEecccHHHHHHHhhcccccccccC
Q 046326 82 MPVVTRLHAIVEESLSKSLKSVLTELC-NPNALVIDLFCTQAFEICSQLSIP-TYSFVTTSVHFFAFITYLPTLDHEVQG 159 (476)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~l~~~~-~pDlVI~D~~~~~~~~~A~~lgIP-~v~~~~~~~~~~~~~~~~p~~~~~~~~ 159 (476)
.+....+........+ .++++|+++. +++|||+|.+++|+.++|+++||| .+.+++++++....+.++|........
T Consensus 80 ~~~~~~~~~~~~~~~~-~~~~~l~~l~~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~~~~~~ 158 (470)
T PLN03015 80 ATIFTKMVVKMRAMKP-AVRDAVKSMKRKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLDTVVEG 158 (470)
T ss_pred ccHHHHHHHHHHhchH-HHHHHHHhcCCCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhhccccc
Confidence 2333345556666677 8999998764 789999999999999999999999 588888888888777777654322111
Q ss_pred CCCCCCCCccCCCCCCCCccccCcccccCChhHHHHHHHHhhccCCCcEEEEcCccccchhHHHHhhhcccCCCCCCCCe
Q 046326 160 EFVDLPEPIKIPGCPPVRPEDLLDQVRNRKIDEYKFFLLHVSRLPLAAGIFLNSWENLEFVPLKAIGEHSFYLQIPTPPI 239 (476)
Q Consensus 160 ~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~p~~ 239 (476)
...+..+++.+||+++++..+++..+.++....+..+........+.+++++|||++||+.++..+.+....++...+++
T Consensus 159 ~~~~~~~~~~vPg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~~v 238 (470)
T PLN03015 159 EYVDIKEPLKIPGCKPVGPKELMETMLDRSDQQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALREDMELNRVMKVPV 238 (470)
T ss_pred ccCCCCCeeeCCCCCCCChHHCCHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhhcccccccCCce
Confidence 11111234568999888888888765444333355555666678889999999999999999988876420000011469
Q ss_pred EeecCCCCCCCCCCCChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEEecCCCCCccccccc
Q 046326 240 NPIGPLIKQDEPLSASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQRFIWVVRMPSDASASATFFN 319 (476)
Q Consensus 240 ~~vGpl~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~ 319 (476)
+.|||+....... ..+++|.+|||++++++||||||||+...+.+++.+++.+|+.++++|||+++.+.... .. ..
T Consensus 239 ~~VGPl~~~~~~~-~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~-~~-~~- 314 (470)
T PLN03015 239 YPIGPIVRTNVHV-EKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYL-GA-SS- 314 (470)
T ss_pred EEecCCCCCcccc-cchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecCcccc-cc-cc-
Confidence 9999998532111 23457999999999899999999999999999999999999999999999997431000 00 00
Q ss_pred cCCCCCCCCCCCChhHHHhhhcCCCCeEeccccchHHhhccCCccceecccCchHHHHHHhcCCcEeeccccchhhhhhh
Q 046326 320 VGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLYAEQRMNAA 399 (476)
Q Consensus 320 ~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~ 399 (476)
.+..+....+|++|.++++. +++++.+|+||..||+|+++++|||||||||++|++++|||||++|+++||+.||+
T Consensus 315 --~~~~~~~~~lp~~f~er~~~--rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~ 390 (470)
T PLN03015 315 --SDDDQVSASLPEGFLDRTRG--VGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNAT 390 (470)
T ss_pred --ccccchhhcCChHHHHhhcc--CceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecccccchHHHHH
Confidence 00001223589999999987 89888899999999999999999999999999999999999999999999999999
Q ss_pred hhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcC--ChhHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHhh
Q 046326 400 MLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEG--EEGKVMRRRVQELKESASRELGDGGSSSDSLASFIKKCK 475 (476)
Q Consensus 400 ~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~--~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 475 (476)
++ ++++|+|+++....+.+.+++++++++|+++|.+ ++|+.+|+||++|++.+++|+++||||++++++|+++++
T Consensus 391 ~~-~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~~~~~~~~ 467 (470)
T PLN03015 391 LL-TEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLFEWAKRCY 467 (470)
T ss_pred HH-HHHhCeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHhcc
Confidence 88 5688999999621112468999999999999963 458889999999999999999999999999999999874
No 3
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=6.6e-68 Score=534.18 Aligned_cols=457 Identities=37% Similarity=0.669 Sum_probs=349.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhcC---CcEEEEEEccCCcc--hhhhhhhhhcC-C--CCceEEEcCCCCCCC
Q 046326 5 SLQPHVAVLPSPGLGHLIPLLEFAKRLVLNH---GVHVSFLVITTNEA--SAAKNNLLRSL-P--HGLDVVDLPPVDVSA 76 (476)
Q Consensus 5 ~~~~rIll~~~p~~GHi~P~l~La~~L~~rG---~h~V~~~~~~~~~~--~~~~~~~~~~~-~--~~~~~~~~~~~~~~~ 76 (476)
|.+.||+|+|+|++||++||+.||+.|+.+| ++.|||+++..+.+ ...+...+... + .+++|++++.+.
T Consensus 1 ~~~~HVVlvPfpaqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~--- 77 (480)
T PLN00164 1 MAAPTVVLLPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRREAASGLDIRFHHLPAVE--- 77 (480)
T ss_pred CCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHhhcccCCCCEEEEECCCCC---
Confidence 4678999999999999999999999999985 26899999876433 22333322211 1 158999998653
Q ss_pred CCCCCC-chHHHHHHHHHHhhcHHHHHHHHhcC-CCCEEEECCCcchHHHHHHHcCCCeEEEecccHHHHHHHhhccccc
Q 046326 77 VTSDDM-PVVTRLHAIVEESLSKSLKSVLTELC-NPNALVIDLFCTQAFEICSQLSIPTYSFVTTSVHFFAFITYLPTLD 154 (476)
Q Consensus 77 ~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~-~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~ 154 (476)
. +.+. +....+........+ .++++++++. +++|||+|.+++|+.++|+++|||++.|++++++.++.+.++|...
T Consensus 78 ~-p~~~e~~~~~~~~~~~~~~~-~l~~~L~~l~~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~ 155 (480)
T PLN00164 78 P-PTDAAGVEEFISRYIQLHAP-HVRAAIAGLSCPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLPALD 155 (480)
T ss_pred C-CCccccHHHHHHHHHHhhhH-HHHHHHHhcCCCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhhhhhhc
Confidence 2 3222 222223334445566 7888888753 4599999999999999999999999999999999999888877543
Q ss_pred ccccCCCCCCCCCccCCCCCCCCccccCcccccCChhHHHHHHHHhhccCCCcEEEEcCccccchhHHHHhhhcc-cCCC
Q 046326 155 HEVQGEFVDLPEPIKIPGCPPVRPEDLLDQVRNRKIDEYKFFLLHVSRLPLAAGIFLNSWENLEFVPLKAIGEHS-FYLQ 233 (476)
Q Consensus 155 ~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~-~~~~ 233 (476)
.....++.+...+..+||+++++..+++..+..+....+..+........+.+++++|||++||+.++.++.... .++.
T Consensus 156 ~~~~~~~~~~~~~~~iPGlp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~ 235 (480)
T PLN00164 156 EEVAVEFEEMEGAVDVPGLPPVPASSLPAPVMDKKSPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIADGRCTPGR 235 (480)
T ss_pred ccccCcccccCcceecCCCCCCChHHCCchhcCCCcHHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHHHhccccccC
Confidence 222111222112345889888888888876544433334455555566778889999999999999999887643 1111
Q ss_pred CCCCCeEeecCCCCCCC--CCCCChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEEecCCCC
Q 046326 234 IPTPPINPIGPLIKQDE--PLSASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQRFIWVVRMPSDA 311 (476)
Q Consensus 234 ~~~p~~~~vGpl~~~~~--~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 311 (476)
..|+++.|||+..... .....+++|.+|||++++++||||||||+...+.+++.+++.+|+.++++|||+++.....
T Consensus 236 -~~~~v~~vGPl~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~~~~~~~ 314 (480)
T PLN00164 236 -PAPTVYPIGPVISLAFTPPAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVLRGPPAA 314 (480)
T ss_pred -CCCceEEeCCCccccccCCCccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEEcCCccc
Confidence 1267999999974221 1113456899999999999999999999998999999999999999999999999853210
Q ss_pred CccccccccCCCCCCCCCCCChhHHHhhhcCCCCeEeccccchHHhhccCCccceecccCchHHHHHHhcCCcEeecccc
Q 046326 312 SASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLY 391 (476)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~ 391 (476)
. .... .+ .+....+|++|.++++. +++++.+|+||.+||+|+++++|||||||||++||+++|||||++|++
T Consensus 315 ~----~~~~-~~-~~~~~~lp~~~~~~~~~--~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~ 386 (480)
T PLN00164 315 G----SRHP-TD-ADLDELLPEGFLERTKG--RGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLY 386 (480)
T ss_pred c----cccc-cc-cchhhhCChHHHHHhcC--CCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCcc
Confidence 0 0000 00 01123489999999987 899999999999999999999999999999999999999999999999
Q ss_pred chhhhhhhhhcceeeeeEEeccccCC-CCCcCHHHHHHHHHHHhcCC--hhHHHHHHHHHHHHHHHHHhccCCChHHHHH
Q 046326 392 AEQRMNAAMLTAEETGVAVKPETEPG-KKVIGREEIERVVRLVMEGE--EGKVMRRRVQELKESASRELGDGGSSSDSLA 468 (476)
Q Consensus 392 ~DQ~~na~~~~~~~~G~G~~l~~~~~-~~~~~~~~l~~ai~~~l~~~--~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~ 468 (476)
+||+.||+++ ++++|+|+.+....+ ++.+++++|+++|+++|.++ +++.+|+||++|++++++++.+||||+++++
T Consensus 387 ~DQ~~Na~~~-~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~l~ 465 (480)
T PLN00164 387 AEQHLNAFEL-VADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSYAALQ 465 (480)
T ss_pred ccchhHHHHH-HHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 9999999876 356899999864111 13479999999999999875 3788999999999999999999999999999
Q ss_pred HHHHHhhC
Q 046326 469 SFIKKCKH 476 (476)
Q Consensus 469 ~~~~~~~~ 476 (476)
+||+++.+
T Consensus 466 ~~v~~~~~ 473 (480)
T PLN00164 466 RLAREIRH 473 (480)
T ss_pred HHHHHHHh
Confidence 99999863
No 4
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=1e-67 Score=527.40 Aligned_cols=434 Identities=29% Similarity=0.468 Sum_probs=333.8
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCC
Q 046326 1 MAVESLQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSD 80 (476)
Q Consensus 1 m~~~~~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (476)
|...+.+.||+++|+|++||++||+.||+.|+.+| +.|||+++.. |... .. ...+ +++|..++. ++ ++
T Consensus 1 ~~~~~~~~HVvlvPfpaqGHi~P~l~LAk~La~~G-~~VT~v~T~~--n~~~--~~-~~~~-~i~~~~ip~----gl-p~ 68 (451)
T PLN02410 1 MEEKPARRRVVLVPVPAQGHISPMMQLAKTLHLKG-FSITIAQTKF--NYFS--PS-DDFT-DFQFVTIPE----SL-PE 68 (451)
T ss_pred CCcCCCCCEEEEECCCccccHHHHHHHHHHHHcCC-CEEEEEeCcc--cccc--cc-cCCC-CeEEEeCCC----CC-Cc
Confidence 66667889999999999999999999999999999 9999999774 4321 11 1122 689998874 22 32
Q ss_pred C----CchHHHHHHHHHHhhcHHHHHHHHhc----C-CCCEEEECCCcchHHHHHHHcCCCeEEEecccHHHHHHHhhcc
Q 046326 81 D----MPVVTRLHAIVEESLSKSLKSVLTEL----C-NPNALVIDLFCTQAFEICSQLSIPTYSFVTTSVHFFAFITYLP 151 (476)
Q Consensus 81 ~----~~~~~~~~~~~~~~~~~~l~~~l~~~----~-~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p 151 (476)
+ ......+........+ .++++++++ . +++|||+|.+++|+.++|+++|||.+.|++++++.++.+.+++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~-~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~ 147 (451)
T PLN02410 69 SDFKNLGPIEFLHKLNKECQV-SFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFD 147 (451)
T ss_pred ccccccCHHHHHHHHHHHhHH-HHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHH
Confidence 1 1222222223334444 677777764 2 5699999999999999999999999999999999888777654
Q ss_pred ccccccc-CCCCCC--CCCccCCCCCCCCccccCcccccCChhHHHHHHHHhhccCCCcEEEEcCccccchhHHHHhhhc
Q 046326 152 TLDHEVQ-GEFVDL--PEPIKIPGCPPVRPEDLLDQVRNRKIDEYKFFLLHVSRLPLAAGIFLNSWENLEFVPLKAIGEH 228 (476)
Q Consensus 152 ~~~~~~~-~~~~~~--~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~ 228 (476)
....... .+..+. .....+|++++++..+++.............+. ......+.+++++|||++||+.++.++...
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~-~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~ 226 (451)
T PLN02410 148 KLYANNVLAPLKEPKGQQNELVPEFHPLRCKDFPVSHWASLESIMELYR-NTVDKRTASSVIINTASCLESSSLSRLQQQ 226 (451)
T ss_pred HHHhccCCCCccccccCccccCCCCCCCChHHCcchhcCCcHHHHHHHH-HHhhcccCCEEEEeChHHhhHHHHHHHHhc
Confidence 3322100 011110 123357888888777777543322222222222 223456788999999999999999888664
Q ss_pred ccCCCCCCCCeEeecCCCCCCC-CCC--CChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEE
Q 046326 229 SFYLQIPTPPINPIGPLIKQDE-PLS--ASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQRFIWVV 305 (476)
Q Consensus 229 ~~~~~~~~p~~~~vGpl~~~~~-~~~--~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~ 305 (476)
. + +++++|||++.... ... ....+|.+|||++++++||||||||+...+.+++.+++.+|+.++++|||++
T Consensus 227 ~--~----~~v~~vGpl~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~ 300 (451)
T PLN02410 227 L--Q----IPVYPIGPLHLVASAPTSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVI 300 (451)
T ss_pred c--C----CCEEEecccccccCCCccccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEE
Confidence 3 2 57999999975322 111 2234689999999989999999999999999999999999999999999999
Q ss_pred ecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCCeEeccccchHHhhccCCccceecccCchHHHHHHhcCCcE
Q 046326 306 RMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPSTGGFLSHCGWNSTLESICHGVPM 385 (476)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~ 385 (476)
+.....+ . +....+|++|++++.. |.++.+|+||.+||+|+++++|||||||||++||+++||||
T Consensus 301 r~~~~~~---------~---~~~~~lp~~f~er~~~---~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~ 365 (451)
T PLN02410 301 RPGSVRG---------S---EWIESLPKEFSKIISG---RGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPM 365 (451)
T ss_pred ccCcccc---------c---chhhcCChhHHHhccC---CeEEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCE
Confidence 8431100 0 1112489999999874 55666999999999999999999999999999999999999
Q ss_pred eeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCCChHH
Q 046326 386 IAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGGSSSD 465 (476)
Q Consensus 386 l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~ 465 (476)
|++|+++||+.||+++ ++.+|+|+.+.. .+++++|+++|+++|.+++++.||+||++|++++++++.+||||.+
T Consensus 366 l~~P~~~DQ~~na~~~-~~~~~~G~~~~~-----~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~ 439 (451)
T PLN02410 366 ICKPFSSDQKVNARYL-ECVWKIGIQVEG-----DLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHN 439 (451)
T ss_pred EeccccccCHHHHHHH-HHHhCeeEEeCC-----cccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHH
Confidence 9999999999999999 335599999864 6899999999999998877888999999999999999999999999
Q ss_pred HHHHHHHHhh
Q 046326 466 SLASFIKKCK 475 (476)
Q Consensus 466 ~~~~~~~~~~ 475 (476)
++++||++++
T Consensus 440 ~l~~fv~~~~ 449 (451)
T PLN02410 440 SLEEFVHFMR 449 (451)
T ss_pred HHHHHHHHHH
Confidence 9999999985
No 5
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.4e-67 Score=529.96 Aligned_cols=440 Identities=30% Similarity=0.471 Sum_probs=341.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCc-
Q 046326 5 SLQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMP- 83 (476)
Q Consensus 5 ~~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 83 (476)
.+++||+++|+|++||++||+.||+.|+.+| +.|||++++ .|...++......+ +++++.++.+..+++ +.+.+
T Consensus 7 ~~~~HVvl~PfpaqGHi~P~l~LAk~La~~G-~~VTfv~T~--~n~~~~~~~~~~~~-~i~~~~lp~P~~~~l-PdG~~~ 81 (477)
T PLN02863 7 PAGTHVLVFPFPAQGHMIPLLDLTHRLALRG-LTITVLVTP--KNLPFLNPLLSKHP-SIETLVLPFPSHPSI-PSGVEN 81 (477)
T ss_pred CCCCEEEEecCcccchHHHHHHHHHHHHhCC-CEEEEEeCC--CcHHHHhhhcccCC-CeeEEeCCCCCcCCC-CCCCcC
Confidence 5689999999999999999999999999999 999999977 46655544433333 688888887655444 54422
Q ss_pred ---h----HHHHHHHHHHhhcHHHHHHHHhcC-CCCEEEECCCcchHHHHHHHcCCCeEEEecccHHHHHHHhhcccccc
Q 046326 84 ---V----VTRLHAIVEESLSKSLKSVLTELC-NPNALVIDLFCTQAFEICSQLSIPTYSFVTTSVHFFAFITYLPTLDH 155 (476)
Q Consensus 84 ---~----~~~~~~~~~~~~~~~l~~~l~~~~-~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~ 155 (476)
. ...+........+ .+.+++++.. +++|||+|.+++|+.++|+++|||++.|++++++.++.+++++....
T Consensus 82 ~~~~~~~~~~~~~~a~~~~~~-~~~~~l~~~~~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~~~~ 160 (477)
T PLN02863 82 VKDLPPSGFPLMIHALGELYA-PLLSWFRSHPSPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMP 160 (477)
T ss_pred hhhcchhhHHHHHHHHHHhHH-HHHHHHHhCCCCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhhccc
Confidence 1 1123334444455 6777777643 77999999999999999999999999999999999998887653211
Q ss_pred cccCCCCCCCC---CccCCCCCCCCccccCccccc--CChhHHHHHHHHhhccCCCcEEEEcCccccchhHHHHhhhccc
Q 046326 156 EVQGEFVDLPE---PIKIPGCPPVRPEDLLDQVRN--RKIDEYKFFLLHVSRLPLAAGIFLNSWENLEFVPLKAIGEHSF 230 (476)
Q Consensus 156 ~~~~~~~~~~~---~~~~p~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~ 230 (476)
... ...+... ...+||+++++..+++..+.. ........+.+........+++++|||++||+.++.++...+
T Consensus 161 ~~~-~~~~~~~~~~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~- 238 (477)
T PLN02863 161 TKI-NPDDQNEILSFSKIPNCPKYPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKEL- 238 (477)
T ss_pred ccc-cccccccccccCCCCCCCCcChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHhhc-
Confidence 100 0001011 124688888888888765432 122233444444444566788999999999999999887643
Q ss_pred CCCCCCCCeEeecCCCCCCC-C-------C--CCChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHhCCCc
Q 046326 231 YLQIPTPPINPIGPLIKQDE-P-------L--SASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQR 300 (476)
Q Consensus 231 ~~~~~~p~~~~vGpl~~~~~-~-------~--~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~ 300 (476)
+ .++++.|||+++... . . ...+++|.+|||.+++++||||||||+...+.+++.+++++|+.++++
T Consensus 239 -~---~~~v~~IGPL~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~ 314 (477)
T PLN02863 239 -G---HDRVWAVGPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVH 314 (477)
T ss_pred -C---CCCeEEeCCCcccccccccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCc
Confidence 1 157999999975321 0 0 012467999999999889999999999989999999999999999999
Q ss_pred eEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCCeEeccccchHHhhccCCccceecccCchHHHHHHh
Q 046326 301 FIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPSTGGFLSHCGWNSTLESIC 380 (476)
Q Consensus 301 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~ 380 (476)
|||+++...... .....+|++|.+++.. +|+++.+|+||.+||+|+++++|||||||||++||++
T Consensus 315 flw~~~~~~~~~-------------~~~~~lp~~~~~r~~~--~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~ 379 (477)
T PLN02863 315 FIWCVKEPVNEE-------------SDYSNIPSGFEDRVAG--RGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLV 379 (477)
T ss_pred EEEEECCCcccc-------------cchhhCCHHHHHHhcc--CCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHH
Confidence 999997532100 1123489999998887 8999999999999999999999999999999999999
Q ss_pred cCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccC
Q 046326 381 HGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDG 460 (476)
Q Consensus 381 ~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~ 460 (476)
+|||||++|+++||+.||+++ ++++|+|+++.. .+...++.+++.++|+++|.+ ++.||+||++|++.+++|+.+|
T Consensus 380 ~GvP~l~~P~~~DQ~~na~~v-~~~~gvG~~~~~-~~~~~~~~~~v~~~v~~~m~~--~~~~r~~a~~l~e~a~~Av~~g 455 (477)
T PLN02863 380 AGVPMLAWPMAADQFVNASLL-VDELKVAVRVCE-GADTVPDSDELARVFMESVSE--NQVERERAKELRRAALDAIKER 455 (477)
T ss_pred cCCCEEeCCccccchhhHHHH-HHhhceeEEecc-CCCCCcCHHHHHHHHHHHhhc--cHHHHHHHHHHHHHHHHHhccC
Confidence 999999999999999999997 357899999864 112356899999999999942 2349999999999999999999
Q ss_pred CChHHHHHHHHHHhh
Q 046326 461 GSSSDSLASFIKKCK 475 (476)
Q Consensus 461 g~~~~~~~~~~~~~~ 475 (476)
|||++++++||++++
T Consensus 456 GSS~~~l~~~v~~i~ 470 (477)
T PLN02863 456 GSSVKDLDGFVKHVV 470 (477)
T ss_pred CcHHHHHHHHHHHHH
Confidence 999999999999986
No 6
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=1.9e-67 Score=527.20 Aligned_cols=441 Identities=24% Similarity=0.411 Sum_probs=340.8
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhh--hh-hc--CC---CCceEEEcCCC
Q 046326 1 MAVESLQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNN--LL-RS--LP---HGLDVVDLPPV 72 (476)
Q Consensus 1 m~~~~~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~--~~-~~--~~---~~~~~~~~~~~ 72 (476)
|.+.+.+.||+++|+|++||++||+.||+.|+.+| ..|||++++. +...+.. .. .. .+ ..++|..++.
T Consensus 1 ~~~~~~~~HVv~~PfpaqGHi~Pml~lA~~La~~G-~~vT~v~T~~--~~~~~~~a~~~~~~~~~~~~~~~i~~~~~pd- 76 (480)
T PLN02555 1 MESESSLVHVMLVSFPGQGHVNPLLRLGKLLASKG-LLVTFVTTES--WGKKMRQANKIQDGVLKPVGDGFIRFEFFED- 76 (480)
T ss_pred CCCCCCCCEEEEECCcccccHHHHHHHHHHHHhCC-CeEEEEeccc--hhhhhhccccccccccccCCCCeEEEeeCCC-
Confidence 88888899999999999999999999999999999 9999999873 5444332 11 11 00 1255555542
Q ss_pred CCCCCCCCC----CchHHHHHHHHHHhhcHHHHHHHHhc--C-C-CCEEEECCCcchHHHHHHHcCCCeEEEecccHHHH
Q 046326 73 DVSAVTSDD----MPVVTRLHAIVEESLSKSLKSVLTEL--C-N-PNALVIDLFCTQAFEICSQLSIPTYSFVTTSVHFF 144 (476)
Q Consensus 73 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~l~~~--~-~-pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~ 144 (476)
++ +++ .++...+........+ .++++++.+ . + ++|||+|.++.|+.++|+++|||.++|++++++.+
T Consensus 77 ---gl-p~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~~~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~ 151 (480)
T PLN02555 77 ---GW-AEDDPRRQDLDLYLPQLELVGKR-EIPNLVKRYAEQGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACF 151 (480)
T ss_pred ---CC-CCCcccccCHHHHHHHHHHhhhH-HHHHHHHHHhccCCCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHH
Confidence 22 322 1232222233334455 788888764 2 4 49999999999999999999999999999999999
Q ss_pred HHHhhcccccccccCCCCCCCCCccCCCCCCCCccccCccccc--CChhHHHHHHHHhhccCCCcEEEEcCccccchhHH
Q 046326 145 AFITYLPTLDHEVQGEFVDLPEPIKIPGCPPVRPEDLLDQVRN--RKIDEYKFFLLHVSRLPLAAGIFLNSWENLEFVPL 222 (476)
Q Consensus 145 ~~~~~~p~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~ 222 (476)
+.+.+++........ ..+......+||+++++..+++..+.. .....++.+.+......+.+++++|||++||+.++
T Consensus 152 ~~~~~~~~~~~~~~~-~~~~~~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~ 230 (480)
T PLN02555 152 SAYYHYYHGLVPFPT-ETEPEIDVQLPCMPLLKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEII 230 (480)
T ss_pred HHHHHHhhcCCCccc-ccCCCceeecCCCCCcCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHH
Confidence 988877532111110 000112345889988888888876532 23344555666667778889999999999999998
Q ss_pred HHhhhcccCCCCCCCCeEeecCCCCCCC---C---C--CCChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHH
Q 046326 223 KAIGEHSFYLQIPTPPINPIGPLIKQDE---P---L--SASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGL 294 (476)
Q Consensus 223 ~~~~~~~~~~~~~~p~~~~vGpl~~~~~---~---~--~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al 294 (476)
..+... .| ++.|||+..... . . ...+++|.+|||++++++||||||||+...+.+++.+++.+|
T Consensus 231 ~~l~~~-------~~-v~~iGPl~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l 302 (480)
T PLN02555 231 DYMSKL-------CP-IKPVGPLFKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGV 302 (480)
T ss_pred HHHhhC-------CC-EEEeCcccCccccccccccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHH
Confidence 887642 14 999999975321 1 1 123567999999999889999999999999999999999999
Q ss_pred HhCCCceEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCCeEeccccchHHhhccCCccceecccCchH
Q 046326 295 EQSKQRFIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPSTGGFLSHCGWNS 374 (476)
Q Consensus 295 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~~~~I~HgG~~s 374 (476)
+.++++|||+++...... . .....+|+++.++++ +|.++++|+||.+||.|+++++|||||||||
T Consensus 303 ~~~~~~flW~~~~~~~~~---------~---~~~~~lp~~~~~~~~---~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS 367 (480)
T PLN02555 303 LNSGVSFLWVMRPPHKDS---------G---VEPHVLPEEFLEKAG---DKGKIVQWCPQEKVLAHPSVACFVTHCGWNS 367 (480)
T ss_pred HhcCCeEEEEEecCcccc---------c---chhhcCChhhhhhcC---CceEEEecCCHHHHhCCCccCeEEecCCcch
Confidence 999999999987431100 0 112357889988876 4667779999999999999999999999999
Q ss_pred HHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccC-CCCCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHH
Q 046326 375 TLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEP-GKKVIGREEIERVVRLVMEGEEGKVMRRRVQELKESA 453 (476)
Q Consensus 375 ~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~-~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~ 453 (476)
++||+++|||||++|+++||+.||+++ ++++|+|+.+.+.. ..+.+++++|+++|+++|.+++++.+|+||++|++.+
T Consensus 368 ~~Eai~~GVP~l~~P~~~DQ~~Na~~~-~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a 446 (480)
T PLN02555 368 TMEALSSGVPVVCFPQWGDQVTDAVYL-VDVFKTGVRLCRGEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEA 446 (480)
T ss_pred HHHHHHcCCCEEeCCCccccHHHHHHH-HHHhCceEEccCCccccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998 44569999995311 1246899999999999998877889999999999999
Q ss_pred HHHhccCCChHHHHHHHHHHhh
Q 046326 454 SRELGDGGSSSDSLASFIKKCK 475 (476)
Q Consensus 454 ~~~~~~~g~~~~~~~~~~~~~~ 475 (476)
++|+.+||||++++++||++++
T Consensus 447 ~~A~~egGSS~~~l~~~v~~i~ 468 (480)
T PLN02555 447 EAAVAEGGSSDRNFQEFVDKLV 468 (480)
T ss_pred HHHhcCCCcHHHHHHHHHHHHH
Confidence 9999999999999999999986
No 7
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=1.1e-66 Score=521.95 Aligned_cols=434 Identities=25% Similarity=0.418 Sum_probs=330.5
Q ss_pred CCCC-CCCCEEEEEcCCCccCHHHHHHHHHH--HHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCC
Q 046326 1 MAVE-SLQPHVAVLPSPGLGHLIPLLEFAKR--LVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAV 77 (476)
Q Consensus 1 m~~~-~~~~rIll~~~p~~GHi~P~l~La~~--L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (476)
|+.. ..+.||+++|+|++||++||+.||++ |++|| ++|||++++. +...+.......+ .+++..++. ++
T Consensus 1 ~~~~~~~~~hvv~~P~pa~GHi~P~l~La~~L~L~~~G-~~VT~v~t~~--~~~~~~~~~~~~~-~~~~~~~~~----gl 72 (456)
T PLN02210 1 MGSSEGQETHVLMVTLAFQGHINPMLKLAKHLSLSSKN-LHFTLATTEQ--ARDLLSTVEKPRR-PVDLVFFSD----GL 72 (456)
T ss_pred CCCcCCCCCEEEEeCCcccccHHHHHHHHHHHHhhcCC-cEEEEEeccc--hhhhhccccCCCC-ceEEEECCC----CC
Confidence 5543 45689999999999999999999999 56999 9999999874 4443322211122 567666652 33
Q ss_pred CCCCC--chHHHHHHHHHHhhcHHHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEecccHHHHHHHhhcccccc
Q 046326 78 TSDDM--PVVTRLHAIVEESLSKSLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFVTTSVHFFAFITYLPTLDH 155 (476)
Q Consensus 78 ~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~ 155 (476)
+++. +....+......+.+ .+++++++. ++||||+|.+++|+..+|+++|||.+.|++.++..+..+.+++....
T Consensus 73 -p~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~-~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~~~ 149 (456)
T PLN02210 73 -PKDDPRAPETLLKSLNKVGAK-NLSKIIEEK-RYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMKTN 149 (456)
T ss_pred -CCCcccCHHHHHHHHHHhhhH-HHHHHHhcC-CCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhccC
Confidence 4332 222223333335555 788888877 99999999999999999999999999999999988887776543211
Q ss_pred cccCCCCCCCCCccCCCCCCCCccccCcccccCChhHHHHHHHHh-hccCCCcEEEEcCccccchhHHHHhhhcccCCCC
Q 046326 156 EVQGEFVDLPEPIKIPGCPPVRPEDLLDQVRNRKIDEYKFFLLHV-SRLPLAAGIFLNSWENLEFVPLKAIGEHSFYLQI 234 (476)
Q Consensus 156 ~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~ 234 (476)
... ...+......+|+++++...+++..+.......+....... ......+++++|||.++|+.++..+.. .
T Consensus 150 ~~~-~~~~~~~~~~~Pgl~~~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~-~----- 222 (456)
T PLN02210 150 SFP-DLEDLNQTVELPALPLLEVRDLPSFMLPSGGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMAD-L----- 222 (456)
T ss_pred CCC-cccccCCeeeCCCCCCCChhhCChhhhcCCchHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhh-c-----
Confidence 111 00110122457888777778877655443332233333222 345567899999999999999888754 1
Q ss_pred CCCCeEeecCCCCC----CCCC----------CCChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHhCCCc
Q 046326 235 PTPPINPIGPLIKQ----DEPL----------SASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQR 300 (476)
Q Consensus 235 ~~p~~~~vGpl~~~----~~~~----------~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~ 300 (476)
+++++|||+++. .... ...+++|.+|||++++++||||||||+...+.+++.+++.+|+.++++
T Consensus 223 --~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~ 300 (456)
T PLN02210 223 --KPVIPIGPLVSPFLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVP 300 (456)
T ss_pred --CCEEEEcccCchhhcCcccccccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCC
Confidence 579999999742 1100 023467999999998889999999999888999999999999999999
Q ss_pred eEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCCeEeccccchHHhhccCCccceecccCchHHHHHHh
Q 046326 301 FIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPSTGGFLSHCGWNSTLESIC 380 (476)
Q Consensus 301 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~ 380 (476)
|||+++.... ...++++.++... ++.++++|+||.+||+|+++++|||||||||++|+++
T Consensus 301 flw~~~~~~~------------------~~~~~~~~~~~~~--~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~ 360 (456)
T PLN02210 301 FLWVIRPKEK------------------AQNVQVLQEMVKE--GQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVV 360 (456)
T ss_pred EEEEEeCCcc------------------ccchhhHHhhccC--CCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHH
Confidence 9999975311 1133556666532 3335669999999999999999999999999999999
Q ss_pred cCCcEeeccccchhhhhhhhhccee-eeeEEeccccCCCCCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhcc
Q 046326 381 HGVPMIAWPLYAEQRMNAAMLTAEE-TGVAVKPETEPGKKVIGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGD 459 (476)
Q Consensus 381 ~GvP~l~~P~~~DQ~~na~~~~~~~-~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~ 459 (476)
+|||||++|+++||+.||+++ ++ +|+|+.+.....++.+++++|+++|+++|.+++|+.+|+||++|++.+++|+++
T Consensus 361 ~GVP~v~~P~~~DQ~~na~~~--~~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~ 438 (456)
T PLN02210 361 AGVPVVAYPSWTDQPIDARLL--VDVFGIGVRMRNDAVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAP 438 (456)
T ss_pred cCCCEEecccccccHHHHHHH--HHHhCeEEEEeccccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999 65 999999865111246899999999999998887889999999999999999999
Q ss_pred CCChHHHHHHHHHHhhC
Q 046326 460 GGSSSDSLASFIKKCKH 476 (476)
Q Consensus 460 ~g~~~~~~~~~~~~~~~ 476 (476)
||||++++++||+++++
T Consensus 439 gGSS~~~l~~~v~~~~~ 455 (456)
T PLN02210 439 GGSSARNLDLFISDITI 455 (456)
T ss_pred CCcHHHHHHHHHHHHhc
Confidence 99999999999999864
No 8
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=9.9e-67 Score=517.85 Aligned_cols=426 Identities=26% Similarity=0.462 Sum_probs=331.7
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCc
Q 046326 4 ESLQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMP 83 (476)
Q Consensus 4 ~~~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (476)
+.++.||+++|+|++||++||+.||+.|+.+| +.|||++++. +...+.. ....+++|+.+++.-.++......+
T Consensus 2 ~~~~~hvv~~P~paqGHi~P~l~lAk~La~~G-~~vT~v~t~~--~~~~~~~---~~~~~i~~~~ipdglp~~~~~~~~~ 75 (449)
T PLN02173 2 EKMRGHVLAVPFPSQGHITPIRQFCKRLHSKG-FKTTHTLTTF--IFNTIHL---DPSSPISIATISDGYDQGGFSSAGS 75 (449)
T ss_pred CCCCcEEEEecCcccccHHHHHHHHHHHHcCC-CEEEEEECCc--hhhhccc---CCCCCEEEEEcCCCCCCcccccccC
Confidence 34567999999999999999999999999999 9999999774 4333221 1112699999974211111011112
Q ss_pred hHHHHHHHHHHhhcHHHHHHHHhc--C-CC-CEEEECCCcchHHHHHHHcCCCeEEEecccHHHHHHHhhcccccccccC
Q 046326 84 VVTRLHAIVEESLSKSLKSVLTEL--C-NP-NALVIDLFCTQAFEICSQLSIPTYSFVTTSVHFFAFITYLPTLDHEVQG 159 (476)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~l~~~--~-~p-DlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 159 (476)
....+........+ .++++++.. . +| +|||+|.+++|+.++|+++|||.+.|++++++.+..+++ +.... .
T Consensus 76 ~~~~~~~~~~~~~~-~~~~~l~~~~~~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~-~~~~~---~ 150 (449)
T PLN02173 76 VPEYLQNFKTFGSK-TVADIIRKHQSTDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYL-SYINN---G 150 (449)
T ss_pred HHHHHHHHHHhhhH-HHHHHHHHhhccCCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHh-HHhcc---C
Confidence 33222233335556 888888874 2 45 999999999999999999999999999998887765543 21111 0
Q ss_pred CCCCCCCCccCCCCCCCCccccCcccccC--ChhHHHHHHHHhhccCCCcEEEEcCccccchhHHHHhhhcccCCCCCCC
Q 046326 160 EFVDLPEPIKIPGCPPVRPEDLLDQVRNR--KIDEYKFFLLHVSRLPLAAGIFLNSWENLEFVPLKAIGEHSFYLQIPTP 237 (476)
Q Consensus 160 ~~~~~~~~~~~p~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~p 237 (476)
.....+|++++++..+++..+... ....+..+.+......+.+++++|||++||+.++.++... +
T Consensus 151 -----~~~~~~pg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~--------~ 217 (449)
T PLN02173 151 -----SLTLPIKDLPLLELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKV--------C 217 (449)
T ss_pred -----CccCCCCCCCCCChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhc--------C
Confidence 113447888888888888765432 2234555666667778889999999999999988887532 4
Q ss_pred CeEeecCCCCCC--------CCC---C----CChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHhCCCceE
Q 046326 238 PINPIGPLIKQD--------EPL---S----ASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQRFI 302 (476)
Q Consensus 238 ~~~~vGpl~~~~--------~~~---~----~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~i 302 (476)
+++.|||+++.. ... + ..+++|.+|||++++++||||||||+...+.+++.+++.+| ++.+||
T Consensus 218 ~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~fl 295 (449)
T PLN02173 218 PVLTIGPTVPSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYL 295 (449)
T ss_pred CeeEEcccCchhhccccccccccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCCEE
Confidence 699999997421 000 0 11346999999999999999999999999999999999999 788999
Q ss_pred EEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCCeEeccccchHHhhccCCccceecccCchHHHHHHhcC
Q 046326 303 WVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPSTGGFLSHCGWNSTLESICHG 382 (476)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~~G 382 (476)
|+++... ...+|+++.+++.. +|+++.+|+||..||+|+++++|||||||||++||+++|
T Consensus 296 Wvvr~~~------------------~~~lp~~~~~~~~~--~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~G 355 (449)
T PLN02173 296 WVVRASE------------------ESKLPPGFLETVDK--DKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLG 355 (449)
T ss_pred EEEeccc------------------hhcccchHHHhhcC--CceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcC
Confidence 9997531 12478899888866 788888999999999999999999999999999999999
Q ss_pred CcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCCC
Q 046326 383 VPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGGS 462 (476)
Q Consensus 383 vP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~ 462 (476)
||||++|+++||+.||+++ ++.+|+|+.+.....+..++.++|+++|+++|.+++++.+|+||+++++++++++++|||
T Consensus 356 VP~l~~P~~~DQ~~Na~~v-~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGS 434 (449)
T PLN02173 356 VPMVAMPQWTDQPMNAKYI-QDVWKVGVRVKAEKESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGS 434 (449)
T ss_pred CCEEecCchhcchHHHHHH-HHHhCceEEEeecccCCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 9999999999999999999 335588888865111134799999999999999887889999999999999999999999
Q ss_pred hHHHHHHHHHHhhC
Q 046326 463 SSDSLASFIKKCKH 476 (476)
Q Consensus 463 ~~~~~~~~~~~~~~ 476 (476)
|.+++++||+++.+
T Consensus 435 S~~~l~~~v~~~~~ 448 (449)
T PLN02173 435 TDININTFVSKIQI 448 (449)
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999999863
No 9
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=4.9e-67 Score=520.32 Aligned_cols=437 Identities=36% Similarity=0.658 Sum_probs=335.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhcCC-cEEEEEEccCCcchhhhhhhhh----cCCCCceEEEcCCCCC-CCCC
Q 046326 5 SLQPHVAVLPSPGLGHLIPLLEFAKRLVLNHG-VHVSFLVITTNEASAAKNNLLR----SLPHGLDVVDLPPVDV-SAVT 78 (476)
Q Consensus 5 ~~~~rIll~~~p~~GHi~P~l~La~~L~~rG~-h~V~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~ 78 (476)
|.+.||+++|+|++||++||+.||+.|+.+|+ +.|++++..++.|.......+. ..+ +++|+.++++.. +...
T Consensus 1 ~~~~Hvvl~P~p~qGHi~P~l~LA~~La~~g~~~~vti~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~lp~~~~~~~~~ 79 (451)
T PLN03004 1 MGEEAIVLYPAPPIGHLVSMVELGKTILSKNPSLSIHIILVPPPYQPESTATYISSVSSSFP-SITFHHLPAVTPYSSSS 79 (451)
T ss_pred CCCcEEEEeCCcccchHHHHHHHHHHHHhCCCceEEEEEEecCcchhhhhhhhhccccCCCC-CeEEEEcCCCCCCCCcc
Confidence 45789999999999999999999999999962 4688877666555433222111 223 699999986532 1210
Q ss_pred CCCCchHHHHHHHHHHhhcHHHHHHHHhc-C--CCCEEEECCCcchHHHHHHHcCCCeEEEecccHHHHHHHhhcccccc
Q 046326 79 SDDMPVVTRLHAIVEESLSKSLKSVLTEL-C--NPNALVIDLFCTQAFEICSQLSIPTYSFVTTSVHFFAFITYLPTLDH 155 (476)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~--~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~ 155 (476)
....+....+........+ .+.++++++ . +++|||+|.+++|+..+|+++|||.+.|++++++.++.+.++|....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~-~~~~~l~~l~~~~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~~~~ 158 (451)
T PLN03004 80 TSRHHHESLLLEILCFSNP-SVHRTLFSLSRNFNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPTIDE 158 (451)
T ss_pred ccccCHHHHHHHHHHhhhH-HHHHHHHhcCCCCCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHhccc
Confidence 1111222233344445556 778888875 2 45999999999999999999999999999999999998888765322
Q ss_pred cccC-CCCCCCCCccCCCCCCCCccccCcccccCChhHHHHHHHHhhccCCCcEEEEcCccccchhHHHHhhhcccCCCC
Q 046326 156 EVQG-EFVDLPEPIKIPGCPPVRPEDLLDQVRNRKIDEYKFFLLHVSRLPLAAGIFLNSWENLEFVPLKAIGEHSFYLQI 234 (476)
Q Consensus 156 ~~~~-~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~ 234 (476)
.... ...+ .....+||+++++..+++..+..+....+..+.+......+.+++++|||++||+.++.++.... +
T Consensus 159 ~~~~~~~~~-~~~v~iPg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~~--~-- 233 (451)
T PLN03004 159 TTPGKNLKD-IPTVHIPGVPPMKGSDMPKAVLERDDEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITEEL--C-- 233 (451)
T ss_pred ccccccccc-CCeecCCCCCCCChHHCchhhcCCchHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHhcC--C--
Confidence 1111 0111 12345789988888888876654443445556666667778889999999999999998886532 1
Q ss_pred CCCCeEeecCCCCCCC-C-C-CCChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEEecCCCC
Q 046326 235 PTPPINPIGPLIKQDE-P-L-SASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQRFIWVVRMPSDA 311 (476)
Q Consensus 235 ~~p~~~~vGpl~~~~~-~-~-~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 311 (476)
.++++.|||+..... . . ...+.+|.+|||++++++||||||||+...+.+++.+++.+|+.++++|||+++.....
T Consensus 234 -~~~v~~vGPl~~~~~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~ 312 (451)
T PLN03004 234 -FRNIYPIGPLIVNGRIEDRNDNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPEL 312 (451)
T ss_pred -CCCEEEEeeeccCccccccccchhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccc
Confidence 157999999975321 1 1 01235699999999989999999999999999999999999999999999999853110
Q ss_pred CccccccccCCCCCCCCCCCChhHHHhhhcCCCCeEeccccchHHhhccCCccceecccCchHHHHHHhcCCcEeecccc
Q 046326 312 SASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLY 391 (476)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~ 391 (476)
+ .+..+....+|++|++++++ +|+++.+|+||..||+|+++++|||||||||++||+++|||||++|++
T Consensus 313 ~---------~~~~~~~~~lp~gf~er~~~--~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~ 381 (451)
T PLN03004 313 E---------KTELDLKSLLPEGFLSRTED--KGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLY 381 (451)
T ss_pred c---------ccccchhhhCChHHHHhccC--CcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEecccc
Confidence 0 00001122489999999988 999999999999999999999999999999999999999999999999
Q ss_pred chhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCCChHH
Q 046326 392 AEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGGSSSD 465 (476)
Q Consensus 392 ~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~ 465 (476)
+||+.||+++ ++++|+|+.++. .+.+.+++++|+++|+++|++++ ||+|++++++.+++|+++||||++
T Consensus 382 ~DQ~~na~~~-~~~~g~g~~l~~-~~~~~~~~e~l~~av~~vm~~~~---~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 382 AEQRFNRVMI-VDEIKIAISMNE-SETGFVSSTEVEKRVQEIIGECP---VRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred ccchhhHHHH-HHHhCceEEecC-CcCCccCHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHhcCCCCCCC
Confidence 9999999999 335899999975 11135799999999999999877 999999999999999999999875
No 10
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=1.9e-66 Score=517.61 Aligned_cols=441 Identities=30% Similarity=0.579 Sum_probs=333.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhcCC-cEEEEEEccCCcchhhhhhhhh----cCCCCceEEEcCCCCCCCCCC
Q 046326 5 SLQPHVAVLPSPGLGHLIPLLEFAKRLVLNHG-VHVSFLVITTNEASAAKNNLLR----SLPHGLDVVDLPPVDVSAVTS 79 (476)
Q Consensus 5 ~~~~rIll~~~p~~GHi~P~l~La~~L~~rG~-h~V~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 79 (476)
|.+.||+|+|+|++||++||+.||+.|+.+|+ ..|||++++.+.+. .++..+. ..+ +++|+.+++...... +
T Consensus 1 ~~~~hvv~~P~p~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~~~~~-~~~~~~~~~~~~~~-~i~~~~lp~~~~~~~-~ 77 (468)
T PLN02207 1 MRNAELIFIPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQS-HLDTYVKSIASSQP-FVRFIDVPELEEKPT-L 77 (468)
T ss_pred CCCcEEEEeCCcchhhHHHHHHHHHHHHhCCCCeEEEEEEcCCCcch-hhHHhhhhccCCCC-CeEEEEeCCCCCCCc-c
Confidence 45689999999999999999999999999863 78999998764432 2222222 123 699999995322110 1
Q ss_pred CC-CchHHHHHHHHHHhhc---HHHHHHHHhc--C-CC-CEEEECCCcchHHHHHHHcCCCeEEEecccHHHHHHHhhcc
Q 046326 80 DD-MPVVTRLHAIVEESLS---KSLKSVLTEL--C-NP-NALVIDLFCTQAFEICSQLSIPTYSFVTTSVHFFAFITYLP 151 (476)
Q Consensus 80 ~~-~~~~~~~~~~~~~~~~---~~l~~~l~~~--~-~p-DlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p 151 (476)
.. .+....+........+ ..+.+++++. + +| +|||+|.+++|+.++|+++|||.+.|++++++.++.+.+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~~ 157 (468)
T PLN02207 78 GGTQSVEAYVYDVIEKNIPLVRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLA 157 (468)
T ss_pred ccccCHHHHHHHHHHhcchhHHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHHhh
Confidence 11 2233333334433322 1345555543 2 33 89999999999999999999999999999999888887776
Q ss_pred cccccccC-CCCCCCCCccCCCC-CCCCccccCcccccCChhHHHHHHHHhhccCCCcEEEEcCccccchhHHHHhhhcc
Q 046326 152 TLDHEVQG-EFVDLPEPIKIPGC-PPVRPEDLLDQVRNRKIDEYKFFLLHVSRLPLAAGIFLNSWENLEFVPLKAIGEHS 229 (476)
Q Consensus 152 ~~~~~~~~-~~~~~~~~~~~p~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~ 229 (476)
........ +..+......+||+ ++++..+++..+..... +..+.+.....++.+++++||+++||..++..+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~vPgl~~~l~~~dlp~~~~~~~~--~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~~~~~~- 234 (468)
T PLN02207 158 DRHSKDTSVFVRNSEEMLSIPGFVNPVPANVLPSALFVEDG--YDAYVKLAILFTKANGILVNSSFDIEPYSVNHFLDE- 234 (468)
T ss_pred hccccccccCcCCCCCeEECCCCCCCCChHHCcchhcCCcc--HHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHHhc-
Confidence 54321110 01111123457898 57888888876532221 444555556678889999999999999988887541
Q ss_pred cCCCCCCCCeEeecCCCCCCCC-CC----CChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEE
Q 046326 230 FYLQIPTPPINPIGPLIKQDEP-LS----ASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQRFIWV 304 (476)
Q Consensus 230 ~~~~~~~p~~~~vGpl~~~~~~-~~----~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~i~~ 304 (476)
+..|+++.|||++..... .. ..+++|.+|||++++++||||||||+...+.+++.+++.+|+.++++|||+
T Consensus 235 ----~~~p~v~~VGPl~~~~~~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~ 310 (468)
T PLN02207 235 ----QNYPSVYAVGPIFDLKAQPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWS 310 (468)
T ss_pred ----cCCCcEEEecCCcccccCCCCccccchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEE
Confidence 123789999999863321 00 123679999999998899999999999999999999999999999999999
Q ss_pred EecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCCeEeccccchHHhhccCCccceecccCchHHHHHHhcCCc
Q 046326 305 VRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPSTGGFLSHCGWNSTLESICHGVP 384 (476)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~~GvP 384 (476)
++.... .....+|++|.+++.. +.++++|+||..||+|+++++|||||||||++||+++|||
T Consensus 311 ~r~~~~---------------~~~~~lp~~f~er~~~---~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP 372 (468)
T PLN02207 311 LRTEEV---------------TNDDLLPEGFLDRVSG---RGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVP 372 (468)
T ss_pred EeCCCc---------------cccccCCHHHHhhcCC---CeEEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCC
Confidence 985311 1224589999998874 4566799999999999999999999999999999999999
Q ss_pred EeeccccchhhhhhhhhcceeeeeEEecccc---CCCCCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCC
Q 046326 385 MIAWPLYAEQRMNAAMLTAEETGVAVKPETE---PGKKVIGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGG 461 (476)
Q Consensus 385 ~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~---~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g 461 (476)
||++|+++||+.||+++ ++++|+|+.+..+ +.++.+++++|+++|+++|++ +++.||+||++|++.+++|+.+||
T Consensus 373 ~l~~P~~~DQ~~Na~~~-~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~-~~~~~r~~a~~l~~~a~~A~~~GG 450 (468)
T PLN02207 373 IVTWPMYAEQQLNAFLM-VKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNK-DNNVVRKRVMDISQMIQRATKNGG 450 (468)
T ss_pred EEecCccccchhhHHHH-HHHhCceEEEecccccccCCcccHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999987 3559999977421 111346999999999999973 355699999999999999999999
Q ss_pred ChHHHHHHHHHHhh
Q 046326 462 SSSDSLASFIKKCK 475 (476)
Q Consensus 462 ~~~~~~~~~~~~~~ 475 (476)
||++++++||++++
T Consensus 451 SS~~~l~~~v~~~~ 464 (468)
T PLN02207 451 SSFAAIEKFIHDVI 464 (468)
T ss_pred cHHHHHHHHHHHHH
Confidence 99999999999885
No 11
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=3.6e-66 Score=517.84 Aligned_cols=426 Identities=25% Similarity=0.414 Sum_probs=331.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHH
Q 046326 7 QPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVT 86 (476)
Q Consensus 7 ~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (476)
+.||+++|+|++||++||+.||+.|+.+| ++||++++.. +...+.......+ +++|+.++....++. + .++..
T Consensus 6 ~~HVVlvPfPaqGHi~PmL~LAk~Las~G-~~VT~vtt~~--~~~~~~~~~~~~~-~i~~v~lp~g~~~~~-~--~~~~~ 78 (448)
T PLN02562 6 RPKIILVPYPAQGHVTPMLKLASAFLSRG-FEPVVITPEF--IHRRISATLDPKL-GITFMSISDGQDDDP-P--RDFFS 78 (448)
T ss_pred CcEEEEEcCccccCHHHHHHHHHHHHhCC-CEEEEEeCcc--hhhhhhhccCCCC-CEEEEECCCCCCCCc-c--ccHHH
Confidence 45999999999999999999999999999 9999999774 5444443333333 699999985322211 1 12322
Q ss_pred HHHHHHH-HhhcHHHHHHHHhcC---CCCEEEECCCcchHHHHHHHcCCCeEEEecccHHHHHHHhhcccccccccCCCC
Q 046326 87 RLHAIVE-ESLSKSLKSVLTELC---NPNALVIDLFCTQAFEICSQLSIPTYSFVTTSVHFFAFITYLPTLDHEVQGEFV 162 (476)
Q Consensus 87 ~~~~~~~-~~~~~~l~~~l~~~~---~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 162 (476)
+..... ...+ .++++++++. +++|||+|.++.|+.++|+++|||.+.|+++++..++.+.++|...........
T Consensus 79 -l~~a~~~~~~~-~l~~ll~~l~~~~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~ 156 (448)
T PLN02562 79 -IENSMENTMPP-QLERLLHKLDEDGEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLISET 156 (448)
T ss_pred -HHHHHHHhchH-HHHHHHHHhcCCCCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhccccccc
Confidence 333333 3455 7888888762 347999999999999999999999999999999888877766543221110000
Q ss_pred C---CCCC-ccCCCCCCCCccccCcccccC--ChhHHHHHHHHhhccCCCcEEEEcCccccchhHHHHhhhcccCCCCCC
Q 046326 163 D---LPEP-IKIPGCPPVRPEDLLDQVRNR--KIDEYKFFLLHVSRLPLAAGIFLNSWENLEFVPLKAIGEHSFYLQIPT 236 (476)
Q Consensus 163 ~---~~~~-~~~p~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~ 236 (476)
+ ..++ ..+|++++++..+++..+... ....+..+.+..+...+.+++++|||++||..++..+.... .++..
T Consensus 157 ~~~~~~~~~~~~Pg~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~--~~~~~ 234 (448)
T PLN02562 157 GCPRQLEKICVLPEQPLLSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASY--NNGQN 234 (448)
T ss_pred cccccccccccCCCCCCCChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhh--ccccC
Confidence 0 0011 247888878888887654322 23345666667777788899999999999998888776432 13334
Q ss_pred CCeEeecCCCCCCCC----CC--CChhhHhhhccCCCCCcEEEEecCCCC-CCCHHHHHHHHHHHHhCCCceEEEEecCC
Q 046326 237 PPINPIGPLIKQDEP----LS--ASDEECLAWLDKQPPDSVLFAVPGSGG-TLTAEQVTEMAWGLEQSKQRFIWVVRMPS 309 (476)
Q Consensus 237 p~~~~vGpl~~~~~~----~~--~~~~~~~~~l~~~~~~~vvyvs~GS~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~ 309 (476)
|+++.|||++..... .+ ..+.+|.+|||++++++||||||||+. ..+.+++.+++.+|+.++++|||+++.+.
T Consensus 235 ~~v~~iGpl~~~~~~~~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~~~ 314 (448)
T PLN02562 235 PQILQIGPLHNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNPVW 314 (448)
T ss_pred CCEEEecCcccccccccCCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcCCc
Confidence 789999999865321 10 223568899999998899999999986 67889999999999999999999996531
Q ss_pred CCCccccccccCCCCCCCCCCCChhHHHhhhcCCCCeEeccccchHHhhccCCccceecccCchHHHHHHhcCCcEeecc
Q 046326 310 DASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWP 389 (476)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P 389 (476)
...+|++|.++.. +|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|
T Consensus 315 ------------------~~~l~~~~~~~~~---~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P 373 (448)
T PLN02562 315 ------------------REGLPPGYVERVS---KQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYP 373 (448)
T ss_pred ------------------hhhCCHHHHHHhc---cCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCC
Confidence 1237888888875 5777789999999999999999999999999999999999999999
Q ss_pred ccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCCChHHHHHH
Q 046326 390 LYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGGSSSDSLAS 469 (476)
Q Consensus 390 ~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~ 469 (476)
+++||+.||+++ ++.+|+|+.+. ++++++|+++|+++|+|++ ||+||++++++++++ ++||||++++++
T Consensus 374 ~~~DQ~~na~~~-~~~~g~g~~~~------~~~~~~l~~~v~~~l~~~~---~r~~a~~l~~~~~~~-~~gGSS~~nl~~ 442 (448)
T PLN02562 374 VAGDQFVNCAYI-VDVWKIGVRIS------GFGQKEVEEGLRKVMEDSG---MGERLMKLRERAMGE-EARLRSMMNFTT 442 (448)
T ss_pred cccchHHHHHHH-HHHhCceeEeC------CCCHHHHHHHHHHHhCCHH---HHHHHHHHHHHHHhc-CCCCCHHHHHHH
Confidence 999999999999 23479998874 4799999999999999877 999999999999887 678999999999
Q ss_pred HHHHhh
Q 046326 470 FIKKCK 475 (476)
Q Consensus 470 ~~~~~~ 475 (476)
||++++
T Consensus 443 ~v~~~~ 448 (448)
T PLN02562 443 LKDELK 448 (448)
T ss_pred HHHHhC
Confidence 999875
No 12
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=3.9e-66 Score=515.90 Aligned_cols=437 Identities=24% Similarity=0.394 Sum_probs=334.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCC---
Q 046326 6 LQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDM--- 82 (476)
Q Consensus 6 ~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 82 (476)
.++||+++|+|++||++||+.||+.|+.|| +.|||++++ .|.............+++++.++.+..+++ +++.
T Consensus 5 ~~~HVvl~P~paqGHi~P~l~LAk~La~~G-~~vT~v~t~--~n~~~~~~~~~~~~~~i~~~~lp~p~~dgl-p~~~~~~ 80 (472)
T PLN02670 5 EVLHVAMFPWLAMGHLIPFLRLSKLLAQKG-HKISFISTP--RNLHRLPKIPSQLSSSITLVSFPLPSVPGL-PSSAESS 80 (472)
T ss_pred CCcEEEEeCChhhhHHHHHHHHHHHHHhCC-CEEEEEeCC--chHHhhhhccccCCCCeeEEECCCCccCCC-CCCcccc
Confidence 367999999999999999999999999999 999999977 465444432122222699999997665555 5431
Q ss_pred -chH----HHHHHHHHHhhcHHHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEecccHHHHHHHhhcccccccc
Q 046326 83 -PVV----TRLHAIVEESLSKSLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFVTTSVHFFAFITYLPTLDHEV 157 (476)
Q Consensus 83 -~~~----~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~ 157 (476)
+.. ..+........+ .+++++++. +++|||+|.++.|+.++|+++|||++.|++++++.++.+.+.+......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~-~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~ 158 (472)
T PLN02670 81 TDVPYTKQQLLKKAFDLLEP-PLTTFLETS-KPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEGG 158 (472)
T ss_pred cccchhhHHHHHHHHHHhHH-HHHHHHHhC-CCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhhhhcc
Confidence 121 123334445556 788888887 9999999999999999999999999999999998888765433221111
Q ss_pred cCCCCCCCCCc-cCCCCCC------CCccccCcccccC--ChhHHHHHHHHhhccCCCcEEEEcCccccchhHHHHhhhc
Q 046326 158 QGEFVDLPEPI-KIPGCPP------VRPEDLLDQVRNR--KIDEYKFFLLHVSRLPLAAGIFLNSWENLEFVPLKAIGEH 228 (476)
Q Consensus 158 ~~~~~~~~~~~-~~p~~~~------~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~ 228 (476)
...+..+.. .+|+++| +...+++..+... ....+..+.+......+.+++++|||++||+.++.++...
T Consensus 159 --~~~~~~~~~~~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~~ 236 (472)
T PLN02670 159 --DLRSTAEDFTVVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFDLLSDL 236 (472)
T ss_pred --cCCCccccccCCCCcCCCCccccccHHHhhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHHHHHHHh
Confidence 111111111 2444433 2334555544221 1122344445555667888999999999999999998764
Q ss_pred ccCCCCCCCCeEeecCCCCC--CCCC-CC----ChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHhCCCce
Q 046326 229 SFYLQIPTPPINPIGPLIKQ--DEPL-SA----SDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQRF 301 (476)
Q Consensus 229 ~~~~~~~~p~~~~vGpl~~~--~~~~-~~----~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~ 301 (476)
. + ++++.|||+.+. .... .. ..++|.+|||++++++||||||||+...+.+++.+++.+|+.++++|
T Consensus 237 ~--~----~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~F 310 (472)
T PLN02670 237 Y--R----KPIIPIGFLPPVIEDDEEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPF 310 (472)
T ss_pred h--C----CCeEEEecCCccccccccccccccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCE
Confidence 2 1 579999999753 1111 01 12579999999988899999999999999999999999999999999
Q ss_pred EEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCCeEeccccchHHhhccCCccceecccCchHHHHHHhc
Q 046326 302 IWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPSTGGFLSHCGWNSTLESICH 381 (476)
Q Consensus 302 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~~ 381 (476)
||+++.... .. .+....+|++|.++++. +++++.+|+||.+||+|+++++|||||||||++||+++
T Consensus 311 lWv~r~~~~-----------~~-~~~~~~lp~~f~~~~~~--rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~ 376 (472)
T PLN02670 311 FWVLRNEPG-----------TT-QNALEMLPDGFEERVKG--RGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGF 376 (472)
T ss_pred EEEEcCCcc-----------cc-cchhhcCChHHHHhccC--CCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHc
Confidence 999985311 00 01123589999999987 89999999999999999999999999999999999999
Q ss_pred CCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCC
Q 046326 382 GVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGG 461 (476)
Q Consensus 382 GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g 461 (476)
|||||++|+++||+.||+++ +++|+|+.+.+..+.+.++.++|+++|+++|.+++|+.||+||+++++.++. .+
T Consensus 377 GVP~l~~P~~~DQ~~Na~~v--~~~g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~----~~ 450 (472)
T PLN02670 377 GRVLILFPVLNEQGLNTRLL--HGKKLGLEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGD----MD 450 (472)
T ss_pred CCCEEeCcchhccHHHHHHH--HHcCeeEEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhC----cc
Confidence 99999999999999999999 8899999997522123589999999999999887677899999999999874 57
Q ss_pred ChHHHHHHHHHHhhC
Q 046326 462 SSSDSLASFIKKCKH 476 (476)
Q Consensus 462 ~~~~~~~~~~~~~~~ 476 (476)
...+++++|+++|++
T Consensus 451 ~~~~~~~~~~~~l~~ 465 (472)
T PLN02670 451 RNNRYVDELVHYLRE 465 (472)
T ss_pred hhHHHHHHHHHHHHH
Confidence 778899999998863
No 13
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=7.3e-66 Score=512.83 Aligned_cols=420 Identities=24% Similarity=0.377 Sum_probs=324.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCc---
Q 046326 7 QPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMP--- 83 (476)
Q Consensus 7 ~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 83 (476)
++||+++|+|++||++|++.||+.|+++| |+|||+++.. +...+... ...+.++++..++.+..+++ +.+.+
T Consensus 4 ~~hvv~~P~paqGHi~P~l~LAk~La~~G-~~VT~vtt~~--~~~~i~~~-~a~~~~i~~~~l~~p~~dgL-p~g~~~~~ 78 (442)
T PLN02208 4 KFHAFMFPWFAFGHMIPFLHLANKLAEKG-HRVTFLLPKK--AQKQLEHH-NLFPDSIVFHPLTIPPVNGL-PAGAETTS 78 (442)
T ss_pred CCEEEEecCccccHHHHHHHHHHHHHhCC-CEEEEEeccc--hhhhhhcc-cCCCCceEEEEeCCCCccCC-CCCccccc
Confidence 78999999999999999999999999999 9999999663 44333322 11222567777765433344 44321
Q ss_pred -h----HHHHHHHHHHhhcHHHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEecccHHHHHHHhhccccccccc
Q 046326 84 -V----VTRLHAIVEESLSKSLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFVTTSVHFFAFITYLPTLDHEVQ 158 (476)
Q Consensus 84 -~----~~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~ 158 (476)
+ ...+........+ .++++++++ ++||||+| ++.|+..+|+++|||++.|++++++.+. +.+++... .
T Consensus 79 ~l~~~l~~~~~~~~~~~~~-~l~~~L~~~-~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~~~~~~~--~- 151 (442)
T PLN02208 79 DIPISMDNLLSEALDLTRD-QVEAAVRAL-RPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSATTIA-HTHVPGGK--L- 151 (442)
T ss_pred chhHHHHHHHHHHHHHHHH-HHHHHHhhC-CCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHHHH-HHccCccc--c-
Confidence 1 1223334455566 788888888 99999999 5899999999999999999999988764 55544210 0
Q ss_pred CCCCCCCCCccCCCCCC----CCccccCcccccCChhHHHHHHHHh-hccCCCcEEEEcCccccchhHHHHhhhcccCCC
Q 046326 159 GEFVDLPEPIKIPGCPP----VRPEDLLDQVRNRKIDEYKFFLLHV-SRLPLAAGIFLNSWENLEFVPLKAIGEHSFYLQ 233 (476)
Q Consensus 159 ~~~~~~~~~~~~p~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~ 233 (476)
...+|+++. ++..+++.. ......+..+.... ....+.+++++|||++||+.++.++...+
T Consensus 152 --------~~~~pglp~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~---- 217 (442)
T PLN02208 152 --------GVPPPGYPSSKVLFRENDAHAL--ATLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQY---- 217 (442)
T ss_pred --------CCCCCCCCCcccccCHHHcCcc--cccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhc----
Confidence 112456653 234444432 12222334444332 35667899999999999999988886532
Q ss_pred CCCCCeEeecCCCCCCCCCCCChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEEecCCCCCc
Q 046326 234 IPTPPINPIGPLIKQDEPLSASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQRFIWVVRMPSDASA 313 (476)
Q Consensus 234 ~~~p~~~~vGpl~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~ 313 (476)
.|+++.|||++.........+++|.+|||++++++||||||||+...+.+++.+++.+++.++.+|+|+++.....
T Consensus 218 --~~~v~~vGpl~~~~~~~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~-- 293 (442)
T PLN02208 218 --HKKVLLTGPMFPEPDTSKPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGS-- 293 (442)
T ss_pred --CCCEEEEeecccCcCCCCCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcc--
Confidence 2689999999865431124678999999999888999999999998899999999999999999999999854110
Q ss_pred cccccccCCCCCCCCCCCChhHHHhhhcCCCCeEeccccchHHhhccCCccceecccCchHHHHHHhcCCcEeeccccch
Q 046326 314 SATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLYAE 393 (476)
Q Consensus 314 ~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~D 393 (476)
. .....+|++|.+++++ +|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++|
T Consensus 294 --------~---~~~~~lp~~f~~r~~~--~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~D 360 (442)
T PLN02208 294 --------S---TVQEGLPEGFEERVKG--RGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSD 360 (442)
T ss_pred --------c---chhhhCCHHHHHHHhc--CCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchh
Confidence 0 1124589999999988 99999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCCh--hHHHHHHHHHHHHHHHHHhccCCChHHHHHHHH
Q 046326 394 QRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGEE--GKVMRRRVQELKESASRELGDGGSSSDSLASFI 471 (476)
Q Consensus 394 Q~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~--~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 471 (476)
|+.||+++ ++.+|+|+.+.+ .+.+.+++++|+++|+++|++++ ++.+|+|++++++.+. ++|||++++++||
T Consensus 361 Q~~na~~~-~~~~g~gv~~~~-~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~----~~gsS~~~l~~~v 434 (442)
T PLN02208 361 QVLFTRLM-TEEFEVSVEVSR-EKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILV----SPGLLTGYVDKFV 434 (442)
T ss_pred hHHHHHHH-HHHhceeEEecc-ccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHh----cCCcHHHHHHHHH
Confidence 99999987 345999999976 11124999999999999998753 8889999999999974 3789999999999
Q ss_pred HHhh
Q 046326 472 KKCK 475 (476)
Q Consensus 472 ~~~~ 475 (476)
++++
T Consensus 435 ~~l~ 438 (442)
T PLN02208 435 EELQ 438 (442)
T ss_pred HHHH
Confidence 9986
No 14
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=1.5e-65 Score=514.24 Aligned_cols=440 Identities=28% Similarity=0.484 Sum_probs=333.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcC---CCCceEEEcCCCCC-CCCCCC
Q 046326 5 SLQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSL---PHGLDVVDLPPVDV-SAVTSD 80 (476)
Q Consensus 5 ~~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~ 80 (476)
.+++||+++|+|++||++||+.||+.|+.+| +.|||++++ .|...+....... ...++|+.++.+.. +++ ++
T Consensus 6 ~~~~Hvv~vPfpaqGHi~P~l~LAk~La~~G-~~vT~v~t~--~n~~~~~~~~~~~~~~~~~i~~~~lp~p~~~dgl-p~ 81 (491)
T PLN02534 6 AKQLHFVLIPLMAQGHMIPMIDMARLLAERG-VIVSLVTTP--QNASRFAKTIDRARESGLPIRLVQIPFPCKEVGL-PI 81 (491)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHHHHhCC-CeEEEEECC--CcHHHHhhhhhhccccCCCeEEEEcCCCCccCCC-CC
Confidence 3468999999999999999999999999999 999999977 4655444433211 11489999997643 244 54
Q ss_pred CC---------chHHHHHHHHHHhhcHHHHHHHHhcC-CCCEEEECCCcchHHHHHHHcCCCeEEEecccHHHHHHHhhc
Q 046326 81 DM---------PVVTRLHAIVEESLSKSLKSVLTELC-NPNALVIDLFCTQAFEICSQLSIPTYSFVTTSVHFFAFITYL 150 (476)
Q Consensus 81 ~~---------~~~~~~~~~~~~~~~~~l~~~l~~~~-~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~ 150 (476)
+. ++...+...+....+ .++++|++.. +++|||+|.+++|+.++|+++|||.+.|++++++....+..+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~l~~lL~~~~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~ 160 (491)
T PLN02534 82 GCENLDTLPSRDLLRKFYDAVDKLQQ-PLERFLEQAKPPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNI 160 (491)
T ss_pred CccccccCCcHHHHHHHHHHHHHhHH-HHHHHHHhcCCCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHH
Confidence 31 122223334444556 7888887643 689999999999999999999999999999998887765432
Q ss_pred ccccccccCCCCCCCCCccCCCCCC---CCccccCcccccCChhHHHHHHHHhhc-cCCCcEEEEcCccccchhHHHHhh
Q 046326 151 PTLDHEVQGEFVDLPEPIKIPGCPP---VRPEDLLDQVRNRKIDEYKFFLLHVSR-LPLAAGIFLNSWENLEFVPLKAIG 226 (476)
Q Consensus 151 p~~~~~~~~~~~~~~~~~~~p~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~le~~~~~~~~ 226 (476)
..... ..+......+..+|++++ ++..+++..+... ..+..+...... ....+++++|||++||+.++.++.
T Consensus 161 ~~~~~--~~~~~~~~~~~~iPg~p~~~~l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~ 236 (491)
T PLN02534 161 RLHNA--HLSVSSDSEPFVVPGMPQSIEITRAQLPGAFVSL--PDLDDVRNKMREAESTAFGVVVNSFNELEHGCAEAYE 236 (491)
T ss_pred HHhcc--cccCCCCCceeecCCCCccccccHHHCChhhcCc--ccHHHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHH
Confidence 11100 001111112345677763 5666666543221 112333333332 245679999999999999998886
Q ss_pred hcccCCCCCCCCeEeecCCCCCCCC-------C--C-CChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHh
Q 046326 227 EHSFYLQIPTPPINPIGPLIKQDEP-------L--S-ASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQ 296 (476)
Q Consensus 227 ~~~~~~~~~~p~~~~vGpl~~~~~~-------~--~-~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~ 296 (476)
... + ++++.|||+...... . . ..+++|.+|||++++++||||||||+.....+++.+++.+|+.
T Consensus 237 ~~~--~----~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~ 310 (491)
T PLN02534 237 KAI--K----KKVWCVGPVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEA 310 (491)
T ss_pred hhc--C----CcEEEECcccccccccccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHh
Confidence 543 1 579999999742110 0 0 1235699999999989999999999999999999999999999
Q ss_pred CCCceEEEEecCCCCCccccccccCCCCCCCC-CCCChhHHHhhhcCCCCeEeccccchHHhhccCCccceecccCchHH
Q 046326 297 SKQRFIWVVRMPSDASASATFFNVGSDVNDPK-AYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPSTGGFLSHCGWNST 375 (476)
Q Consensus 297 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~~~~I~HgG~~s~ 375 (476)
++++|||+++..... . +.. ..+|++|.+++.+ +|+++.+|+||..||+|+++++|||||||||+
T Consensus 311 ~~~~flW~~r~~~~~----------~---~~~~~~~p~gf~~~~~~--~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~ 375 (491)
T PLN02534 311 SKKPFIWVIKTGEKH----------S---ELEEWLVKENFEERIKG--RGLLIKGWAPQVLILSHPAIGGFLTHCGWNST 375 (491)
T ss_pred CCCCEEEEEecCccc----------c---chhhhcCchhhHHhhcc--CCeeccCCCCHHHHhcCCccceEEecCccHHH
Confidence 999999999843110 0 111 2368999988877 89999999999999999999999999999999
Q ss_pred HHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEecccc------CCC--C-CcCHHHHHHHHHHHhc--CChhHHHHH
Q 046326 376 LESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETE------PGK--K-VIGREEIERVVRLVME--GEEGKVMRR 444 (476)
Q Consensus 376 ~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~------~~~--~-~~~~~~l~~ai~~~l~--~~~~~~~~~ 444 (476)
+||+++|||||++|+++||+.||+++ ++.+|+|+++..+ ++. + .+++++++++|+++|. +++|+.+|+
T Consensus 376 ~ea~~~GvP~v~~P~~~dq~~na~~~-~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~ 454 (491)
T PLN02534 376 IEGICSGVPMITWPLFAEQFLNEKLI-VEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRR 454 (491)
T ss_pred HHHHHcCCCEEeccccccHHHHHHHH-HHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHH
Confidence 99999999999999999999999999 6789999987421 111 1 4899999999999997 455888999
Q ss_pred HHHHHHHHHHHHhccCCChHHHHHHHHHHhh
Q 046326 445 RVQELKESASRELGDGGSSSDSLASFIKKCK 475 (476)
Q Consensus 445 ~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 475 (476)
||++|++.+++++.+||||++++++||++++
T Consensus 455 rA~elk~~a~~Av~~GGSS~~nl~~fv~~i~ 485 (491)
T PLN02534 455 RAQELGVMARKAMELGGSSHINLSILIQDVL 485 (491)
T ss_pred HHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 9999999999999999999999999999986
No 15
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=1.6e-64 Score=500.27 Aligned_cols=422 Identities=24% Similarity=0.389 Sum_probs=322.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCC--ceEEEcCCCCCCCCCCCCC
Q 046326 5 SLQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHG--LDVVDLPPVDVSAVTSDDM 82 (476)
Q Consensus 5 ~~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 82 (476)
..++||+++|+|++||++||+.||+.|+.+| +.|||++++. |...+... ...+.+ +.+++++. .+++ +++.
T Consensus 3 ~~~~Hvvl~P~paqGHi~P~l~LAk~La~~g-~~vT~~tt~~--~~~~~~~~-~~~~~~~~v~~~~~p~--~~gl-p~g~ 75 (453)
T PLN02764 3 GLKFHVLMYPWFATGHMTPFLFLANKLAEKG-HTVTFLLPKK--ALKQLEHL-NLFPHNIVFRSVTVPH--VDGL-PVGT 75 (453)
T ss_pred CCCcEEEEECCcccccHHHHHHHHHHHHhCC-CEEEEEeCcc--hhhhhccc-ccCCCCceEEEEECCC--cCCC-CCcc
Confidence 4579999999999999999999999999999 9999999764 55444332 111212 55655653 2344 5442
Q ss_pred c--------hHHHHHHHHHHhhcHHHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEecccHHHHHHHhhccccc
Q 046326 83 P--------VVTRLHAIVEESLSKSLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFVTTSVHFFAFITYLPTLD 154 (476)
Q Consensus 83 ~--------~~~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~ 154 (476)
+ ....+........+ .+.+++++. ++||||+|. +.|+.++|+++|||.+.|++++++.++.+.. +..
T Consensus 76 e~~~~~~~~~~~~~~~a~~~~~~-~~~~~l~~~-~~~~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~-~~~- 150 (453)
T PLN02764 76 ETVSEIPVTSADLLMSAMDLTRD-QVEVVVRAV-EPDLIFFDF-AHWIPEVARDFGLKTVKYVVVSASTIASMLV-PGG- 150 (453)
T ss_pred cccccCChhHHHHHHHHHHHhHH-HHHHHHHhC-CCCEEEECC-chhHHHHHHHhCCCEEEEEcHHHHHHHHHhc-ccc-
Confidence 1 11223344444556 788888888 999999995 8999999999999999999999988887753 210
Q ss_pred ccccCCCCCCCCCccCCCCCC----CCccccCcccc-cC--C-hhHHHHHHHHhhccCCCcEEEEcCccccchhHHHHhh
Q 046326 155 HEVQGEFVDLPEPIKIPGCPP----VRPEDLLDQVR-NR--K-IDEYKFFLLHVSRLPLAAGIFLNSWENLEFVPLKAIG 226 (476)
Q Consensus 155 ~~~~~~~~~~~~~~~~p~~~~----~~~~~l~~~~~-~~--~-~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~ 226 (476)
.. ....|+++. ++..+++.... .. . ......+.+......+.+++++|||++||+.++.++.
T Consensus 151 -----~~-----~~~~pglp~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~ 220 (453)
T PLN02764 151 -----EL-----GVPPPGYPSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIE 220 (453)
T ss_pred -----cC-----CCCCCCCCCCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHH
Confidence 00 011356542 44444443211 01 1 1112222222255677889999999999999998886
Q ss_pred hcccCCCCCCCCeEeecCCCCCCCCCCCChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEEe
Q 046326 227 EHSFYLQIPTPPINPIGPLIKQDEPLSASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQRFIWVVR 306 (476)
Q Consensus 227 ~~~~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~ 306 (476)
... + ++++.|||++.........+++|.+|||++++++||||||||+...+.+++.+++.+|+.++.+|+|+++
T Consensus 221 ~~~--~----~~v~~VGPL~~~~~~~~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r 294 (453)
T PLN02764 221 KHC--R----KKVLLTGPVFPEPDKTRELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVK 294 (453)
T ss_pred hhc--C----CcEEEeccCccCccccccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEe
Confidence 532 1 5799999997543111123568999999999999999999999989999999999999999999999998
Q ss_pred cCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCCeEeccccchHHhhccCCccceecccCchHHHHHHhcCCcEe
Q 046326 307 MPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPSTGGFLSHCGWNSTLESICHGVPMI 386 (476)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l 386 (476)
.... .+ .....+|++|.+++++ +++++.+|+||..||+|+++++|||||||||++||+++|||||
T Consensus 295 ~~~~-----------~~--~~~~~lp~~f~~r~~g--rG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l 359 (453)
T PLN02764 295 PPRG-----------SS--TIQEALPEGFEERVKG--RGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIV 359 (453)
T ss_pred CCCC-----------Cc--chhhhCCcchHhhhcc--CCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEE
Confidence 5321 00 1234689999999987 8999999999999999999999999999999999999999999
Q ss_pred eccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCC--hhHHHHHHHHHHHHHHHHHhccCCChH
Q 046326 387 AWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGE--EGKVMRRRVQELKESASRELGDGGSSS 464 (476)
Q Consensus 387 ~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~--~~~~~~~~a~~l~~~~~~~~~~~g~~~ 464 (476)
++|++.||+.||+++ ++.+|+|+.+.. .+.+.++.++|+++|+++|+++ +++.+|++++++++.++ ++|||.
T Consensus 360 ~~P~~~DQ~~na~~l-~~~~g~gv~~~~-~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~----~~GSS~ 433 (453)
T PLN02764 360 LVPQLGDQVLNTRLL-SDELKVSVEVAR-EETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLA----SPGLLT 433 (453)
T ss_pred eCCcccchHHHHHHH-HHHhceEEEecc-ccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHH----hcCCHH
Confidence 999999999999999 336899998754 1113589999999999999874 37889999999999985 579999
Q ss_pred HHHHHHHHHhh
Q 046326 465 DSLASFIKKCK 475 (476)
Q Consensus 465 ~~~~~~~~~~~ 475 (476)
+++++||+++.
T Consensus 434 ~~l~~lv~~~~ 444 (453)
T PLN02764 434 GYVDNFIESLQ 444 (453)
T ss_pred HHHHHHHHHHH
Confidence 99999999886
No 16
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=6.2e-65 Score=513.84 Aligned_cols=443 Identities=33% Similarity=0.592 Sum_probs=328.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcE---EEEEEccCCcch---hhhhhhhhcCCCCceEEEcCCCCCCCCC
Q 046326 5 SLQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVH---VSFLVITTNEAS---AAKNNLLRSLPHGLDVVDLPPVDVSAVT 78 (476)
Q Consensus 5 ~~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~---V~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (476)
+++.||+++|+|++||++||+.||+.|+.+| .. ||++++..+.+. ..++......+ +++|+.++++.....
T Consensus 1 ~~~~hVv~~PfpaqGHi~P~l~LAk~La~~G-~~~t~vt~~~t~~~~~~~~~~~~~~~~~~~~-~i~~~~lp~~~~p~~- 77 (475)
T PLN02167 1 KKEAELIFVPFPSTGHILVTIEFAKRLINLD-RRIHTITILYWSLPFAPQADAFLKSLIASEP-RIRLVTLPEVQDPPP- 77 (475)
T ss_pred CCccEEEEeCChhhhhHHHHHHHHHHHHhCC-CCeEEEEEEECCCCcchhhhHHHhhcccCCC-CeEEEECCCCCCCcc-
Confidence 4678999999999999999999999999998 43 455554432221 11111111123 699999986531100
Q ss_pred CC--CCchHHHHHHHHHHhhcHHHHHHHHhc-----C----CCCEEEECCCcchHHHHHHHcCCCeEEEecccHHHHHHH
Q 046326 79 SD--DMPVVTRLHAIVEESLSKSLKSVLTEL-----C----NPNALVIDLFCTQAFEICSQLSIPTYSFVTTSVHFFAFI 147 (476)
Q Consensus 79 ~~--~~~~~~~~~~~~~~~~~~~l~~~l~~~-----~----~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~ 147 (476)
.+ .......+........+ .+++.++++ . +++|||+|.+++|+.++|+++|||.+.|++++++.++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~~~ 156 (475)
T PLN02167 78 MELFVKASEAYILEFVKKMVP-LVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMM 156 (475)
T ss_pred ccccccchHHHHHHHHHHHHH-HHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHHHH
Confidence 01 11111223344444444 566665543 1 238999999999999999999999999999999998888
Q ss_pred hhcccccccccCCCCC--CCCCccCCCCC-CCCccccCcccccCChhHHHHHHHHhhccCCCcEEEEcCccccchhHHHH
Q 046326 148 TYLPTLDHEVQGEFVD--LPEPIKIPGCP-PVRPEDLLDQVRNRKIDEYKFFLLHVSRLPLAAGIFLNSWENLEFVPLKA 224 (476)
Q Consensus 148 ~~~p~~~~~~~~~~~~--~~~~~~~p~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~ 224 (476)
.++|.........+.. ...+..+||++ +++..+++..+... ..+..+.+......+.+++++|||++||+.++.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~iPgl~~~l~~~dlp~~~~~~--~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~ 234 (475)
T PLN02167 157 KYLPERHRKTASEFDLSSGEEELPIPGFVNSVPTKVLPPGLFMK--ESYEAWVEIAERFPEAKGILVNSFTELEPNAFDY 234 (475)
T ss_pred HHHHHhccccccccccCCCCCeeECCCCCCCCChhhCchhhhCc--chHHHHHHHHHhhcccCEeeeccHHHHHHHHHHH
Confidence 7776432111101111 01234578884 57777776544332 1244455556667788999999999999999988
Q ss_pred hhhcccCCCCCCCCeEeecCCCCCCCC---C--CCChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHhCCC
Q 046326 225 IGEHSFYLQIPTPPINPIGPLIKQDEP---L--SASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQ 299 (476)
Q Consensus 225 ~~~~~~~~~~~~p~~~~vGpl~~~~~~---~--~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~ 299 (476)
+.... + .+|++++|||++..... . ...+.+|.+|||++++++||||||||+...+.+++.+++.+|+.+++
T Consensus 235 l~~~~--~--~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~ 310 (475)
T PLN02167 235 FSRLP--E--NYPPVYPVGPILSLKDRTSPNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGC 310 (475)
T ss_pred HHhhc--c--cCCeeEEeccccccccccCCCCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCC
Confidence 85531 1 12689999999763221 0 01236799999999988999999999988899999999999999999
Q ss_pred ceEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCCeEeccccchHHhhccCCccceecccCchHHHHHH
Q 046326 300 RFIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPSTGGFLSHCGWNSTLESI 379 (476)
Q Consensus 300 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~~~~I~HgG~~s~~eal 379 (476)
+|||+++...... . .....+|++|.+++.. ++ ++++|+||.+||+|+++++|||||||||++||+
T Consensus 311 ~flw~~~~~~~~~---------~---~~~~~lp~~~~er~~~--rg-~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal 375 (475)
T PLN02167 311 RFLWSIRTNPAEY---------A---SPYEPLPEGFMDRVMG--RG-LVCGWAPQVEILAHKAIGGFVSHCGWNSVLESL 375 (475)
T ss_pred cEEEEEecCcccc---------c---chhhhCChHHHHHhcc--Ce-eeeccCCHHHHhcCcccCeEEeeCCcccHHHHH
Confidence 9999997531100 0 1123589999999875 55 556999999999999999999999999999999
Q ss_pred hcCCcEeeccccchhhhhhhh-hcceeeeeEEecccc---CCCCCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHH
Q 046326 380 CHGVPMIAWPLYAEQRMNAAM-LTAEETGVAVKPETE---PGKKVIGREEIERVVRLVMEGEEGKVMRRRVQELKESASR 455 (476)
Q Consensus 380 ~~GvP~l~~P~~~DQ~~na~~-~~~~~~G~G~~l~~~---~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~ 455 (476)
++|||||++|+++||+.||++ + +++|+|+.+... ++...+++++|+++|+++|.+++ .||+||+++++++++
T Consensus 376 ~~GvP~l~~P~~~DQ~~na~~~~--~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~--~~r~~a~~~~~~~~~ 451 (475)
T PLN02167 376 WFGVPIATWPMYAEQQLNAFTMV--KELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGED--VPRKKVKEIAEAARK 451 (475)
T ss_pred HcCCCEEeccccccchhhHHHHH--HHhCeeEEeecccccccCCcccHHHHHHHHHHHhcCCH--HHHHHHHHHHHHHHH
Confidence 999999999999999999976 6 899999998641 01135799999999999997652 499999999999999
Q ss_pred HhccCCChHHHHHHHHHHhhC
Q 046326 456 ELGDGGSSSDSLASFIKKCKH 476 (476)
Q Consensus 456 ~~~~~g~~~~~~~~~~~~~~~ 476 (476)
++.+||||.+++++||++|++
T Consensus 452 av~~gGsS~~~l~~~v~~i~~ 472 (475)
T PLN02167 452 AVMDGGSSFVAVKRFIDDLLG 472 (475)
T ss_pred HHhCCCcHHHHHHHHHHHHHh
Confidence 999999999999999999863
No 17
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=1.3e-64 Score=503.60 Aligned_cols=430 Identities=24% Similarity=0.402 Sum_probs=323.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHh-cCCcEEEEEEccCCcch-hhhhhhhhcCCCCceEEEcCCCCCCCCCCCC-
Q 046326 5 SLQPHVAVLPSPGLGHLIPLLEFAKRLVL-NHGVHVSFLVITTNEAS-AAKNNLLRSLPHGLDVVDLPPVDVSAVTSDD- 81 (476)
Q Consensus 5 ~~~~rIll~~~p~~GHi~P~l~La~~L~~-rG~h~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 81 (476)
|.+.||+++|+|++||++||+.||+.|+. +| +.|||+++.. +. ..........+ +++|+.++. ++ +.+
T Consensus 1 ~~~~hvv~~P~p~qGHi~P~l~La~~La~~~G-~~vT~v~t~~--~~~~~~~~~~~~~~-~i~~~~i~d----gl-p~g~ 71 (455)
T PLN02152 1 MAPPHFLLVTFPAQGHVNPSLRFARRLIKTTG-TRVTFATCLS--VIHRSMIPNHNNVE-NLSFLTFSD----GF-DDGV 71 (455)
T ss_pred CCCcEEEEecCcccccHHHHHHHHHHHhhCCC-cEEEEEeccc--hhhhhhhccCCCCC-CEEEEEcCC----CC-CCcc
Confidence 34679999999999999999999999996 68 9999999773 31 11111111112 689999873 33 322
Q ss_pred ----CchHHHHHHHHHHhhcHHHHHHHHhc--C--CCCEEEECCCcchHHHHHHHcCCCeEEEecccHHHHHHHhhcccc
Q 046326 82 ----MPVVTRLHAIVEESLSKSLKSVLTEL--C--NPNALVIDLFCTQAFEICSQLSIPTYSFVTTSVHFFAFITYLPTL 153 (476)
Q Consensus 82 ----~~~~~~~~~~~~~~~~~~l~~~l~~~--~--~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~ 153 (476)
.+....+......+.+ .++++++++ . +++|||+|.+++|+.++|+++|||.+.|++++++.++.+++++..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~-~l~~~l~~l~~~~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~ 150 (455)
T PLN02152 72 ISNTDDVQNRLVNFERNGDK-ALSDFIEANLNGDSPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTG 150 (455)
T ss_pred ccccccHHHHHHHHHHhccH-HHHHHHHHhhccCCCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhcc
Confidence 1233334444445556 888888864 2 349999999999999999999999999999999999988776532
Q ss_pred cccccCCCCCCCCCccCCCCCCCCccccCcccccC--ChhHHHHHHHHhhccCC--CcEEEEcCccccchhHHHHhhhcc
Q 046326 154 DHEVQGEFVDLPEPIKIPGCPPVRPEDLLDQVRNR--KIDEYKFFLLHVSRLPL--AAGIFLNSWENLEFVPLKAIGEHS 229 (476)
Q Consensus 154 ~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~s~~~le~~~~~~~~~~~ 229 (476)
. .....+|+++++...+++..+... ....+..+.+......+ .+++++|||++||+.++.++..
T Consensus 151 ~----------~~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~-- 218 (455)
T PLN02152 151 N----------NSVFEFPNLPSLEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPN-- 218 (455)
T ss_pred C----------CCeeecCCCCCCchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc--
Confidence 1 113457888888888888765432 22223444444443332 4699999999999999888742
Q ss_pred cCCCCCCCCeEeecCCCCCC---CC--CC-----CChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHhCCC
Q 046326 230 FYLQIPTPPINPIGPLIKQD---EP--LS-----ASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQ 299 (476)
Q Consensus 230 ~~~~~~~p~~~~vGpl~~~~---~~--~~-----~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~ 299 (476)
.+++.|||+.+.. .. .+ ..+.+|.+|||++++++||||||||+...+.+++.+++.+|+.++.
T Consensus 219 -------~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~ 291 (455)
T PLN02152 219 -------IEMVAVGPLLPAEIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKR 291 (455)
T ss_pred -------CCEEEEcccCccccccccccCccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCC
Confidence 2599999997532 10 00 1235799999999988999999999999999999999999999999
Q ss_pred ceEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCCeEeccccchHHhhccCCccceecccCchHHHHHH
Q 046326 300 RFIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPSTGGFLSHCGWNSTLESI 379 (476)
Q Consensus 300 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~~~~I~HgG~~s~~eal 379 (476)
+|||+++.....+.. .+ .. ......+|++|.++.+ ++.++.+|+||.+||+|+++++|||||||||++||+
T Consensus 292 ~flWv~r~~~~~~~~---~~-~~--~~~~~~~~~~f~e~~~---~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~ 362 (455)
T PLN02152 292 PFLWVITDKLNREAK---IE-GE--EETEIEKIAGFRHELE---EVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESL 362 (455)
T ss_pred CeEEEEecCcccccc---cc-cc--cccccccchhHHHhcc---CCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHH
Confidence 999999753110000 00 00 0001124788988876 455777999999999999999999999999999999
Q ss_pred hcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhcc
Q 046326 380 CHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGD 459 (476)
Q Consensus 380 ~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~ 459 (476)
++|||||++|+++||+.||+++ ++.+|+|+.+.. +..+.+++++|+++|+++|+++ ++.||+||++|++.+++++.+
T Consensus 363 ~~GvP~l~~P~~~DQ~~na~~~-~~~~~~G~~~~~-~~~~~~~~e~l~~av~~vm~~~-~~~~r~~a~~~~~~~~~a~~~ 439 (455)
T PLN02152 363 VLGVPVVAFPMWSDQPANAKLL-EEIWKTGVRVRE-NSEGLVERGEIRRCLEAVMEEK-SVELRESAEKWKRLAIEAGGE 439 (455)
T ss_pred HcCCCEEeccccccchHHHHHH-HHHhCceEEeec-CcCCcCcHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999 333466655543 1123569999999999999754 566999999999999999999
Q ss_pred CCChHHHHHHHHHHhh
Q 046326 460 GGSSSDSLASFIKKCK 475 (476)
Q Consensus 460 ~g~~~~~~~~~~~~~~ 475 (476)
||||++++++||+++.
T Consensus 440 ggsS~~nl~~li~~i~ 455 (455)
T PLN02152 440 GGSSDKNVEAFVKTLC 455 (455)
T ss_pred CCcHHHHHHHHHHHhC
Confidence 9999999999999874
No 18
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=1.6e-64 Score=503.80 Aligned_cols=419 Identities=23% Similarity=0.360 Sum_probs=318.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCc---
Q 046326 7 QPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMP--- 83 (476)
Q Consensus 7 ~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 83 (476)
++||+++|+|++||++||+.||+.|+++| ++|||+++. .+...+.... ..+.+++|+.++.+..+++ +++.+
T Consensus 4 ~~HVvlvPfpaqGHi~PmL~LAk~Las~G-~~VT~vtt~--~~~~~i~~~~-~~~~~i~~~~i~lP~~dGL-P~g~e~~~ 78 (446)
T PLN00414 4 KFHAFMYPWFGFGHMIPYLHLANKLAEKG-HRVTFFLPK--KAHKQLQPLN-LFPDSIVFEPLTLPPVDGL-PFGAETAS 78 (446)
T ss_pred CCEEEEecCcccchHHHHHHHHHHHHhCC-CEEEEEeCC--chhhhhcccc-cCCCceEEEEecCCCcCCC-CCcccccc
Confidence 78999999999999999999999999999 999999976 3544443321 1222588877765544555 55422
Q ss_pred -h----HHHHHHHHHHhhcHHHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEecccHHHHHHHhhccccccccc
Q 046326 84 -V----VTRLHAIVEESLSKSLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFVTTSVHFFAFITYLPTLDHEVQ 158 (476)
Q Consensus 84 -~----~~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~ 158 (476)
+ ...+........+ .++++++.. +|||||+|. ++|+.++|+++|||++.|+++++..++.+.+ +.. ..
T Consensus 79 ~l~~~~~~~~~~a~~~l~~-~l~~~L~~~-~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~-~~~--~~- 151 (446)
T PLN00414 79 DLPNSTKKPIFDAMDLLRD-QIEAKVRAL-KPDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVAMVLA-PRA--EL- 151 (446)
T ss_pred cchhhHHHHHHHHHHHHHH-HHHHHHhcC-CCeEEEECC-chhHHHHHHHhCCCEEEEecHHHHHHHHHhC-cHh--hc-
Confidence 1 1123333444555 677777766 999999995 8999999999999999999999988887765 221 00
Q ss_pred CCCCCCCCCccCCCCCC----CCccccCc-ccccCChhHHHHHHHHhhccCCCcEEEEcCccccchhHHHHhhhcccCCC
Q 046326 159 GEFVDLPEPIKIPGCPP----VRPEDLLD-QVRNRKIDEYKFFLLHVSRLPLAAGIFLNSWENLEFVPLKAIGEHSFYLQ 233 (476)
Q Consensus 159 ~~~~~~~~~~~~p~~~~----~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~ 233 (476)
...+|+++. ++..+... .+.... ...+.+......+.+++++|||++||+.++.++.+.. +
T Consensus 152 --------~~~~pg~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~--~- 217 (446)
T PLN00414 152 --------GFPPPDYPLSKVALRGHDANVCSLFANS---HELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQC--Q- 217 (446)
T ss_pred --------CCCCCCCCCCcCcCchhhcccchhhccc---HHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhc--C-
Confidence 011244432 22222110 111111 2333344456667899999999999999998887642 1
Q ss_pred CCCCCeEeecCCCCCCCC--CCCChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEEecCCCC
Q 046326 234 IPTPPINPIGPLIKQDEP--LSASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQRFIWVVRMPSDA 311 (476)
Q Consensus 234 ~~~p~~~~vGpl~~~~~~--~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 311 (476)
++++.|||+.+.... ....+++|.+|||+++++|||||||||+.....+++.+++.+|+.++.+|+|+++.....
T Consensus 218 ---~~v~~VGPl~~~~~~~~~~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~ 294 (446)
T PLN00414 218 ---RKVLLTGPMLPEPQNKSGKPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGS 294 (446)
T ss_pred ---CCeEEEcccCCCcccccCcccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCc
Confidence 469999999753321 112245799999999999999999999999999999999999999999999999863210
Q ss_pred CccccccccCCCCCCCCCCCChhHHHhhhcCCCCeEeccccchHHhhccCCccceecccCchHHHHHHhcCCcEeecccc
Q 046326 312 SASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLY 391 (476)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~ 391 (476)
. +....+|++|.++++. +++++.+|+||..||+|+++++|||||||||++||+++|||||++|++
T Consensus 295 ----------~---~~~~~lp~~f~~r~~~--~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~ 359 (446)
T PLN00414 295 ----------S---TVQEALPEGFEERVKG--RGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQL 359 (446)
T ss_pred ----------c---cchhhCChhHHHHhcC--CCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcc
Confidence 0 1224689999999987 899988999999999999999999999999999999999999999999
Q ss_pred chhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCC--hhHHHHHHHHHHHHHHHHHhccCCChHHHHHH
Q 046326 392 AEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGE--EGKVMRRRVQELKESASRELGDGGSSSDSLAS 469 (476)
Q Consensus 392 ~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~--~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~ 469 (476)
.||+.||+++ ++++|+|+.+.+ .+.+.+++++|+++++++|.++ .++.+|++++++++.+. ++||++ .++++
T Consensus 360 ~dQ~~na~~~-~~~~g~g~~~~~-~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~---~~gg~s-s~l~~ 433 (446)
T PLN00414 360 ADQVLITRLL-TEELEVSVKVQR-EDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLV---SPGLLS-GYADK 433 (446)
T ss_pred cchHHHHHHH-HHHhCeEEEecc-ccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHH---cCCCcH-HHHHH
Confidence 9999999999 447999999975 1113589999999999999864 37889999999999964 556744 34899
Q ss_pred HHHHhh
Q 046326 470 FIKKCK 475 (476)
Q Consensus 470 ~~~~~~ 475 (476)
||++++
T Consensus 434 ~v~~~~ 439 (446)
T PLN00414 434 FVEALE 439 (446)
T ss_pred HHHHHH
Confidence 999885
No 19
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.4e-64 Score=511.96 Aligned_cols=443 Identities=33% Similarity=0.594 Sum_probs=329.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcC-CcEEEEEEccCCcchhhh---hhhhhcC----CCCceEEEcCCCCCCCCC
Q 046326 7 QPHVAVLPSPGLGHLIPLLEFAKRLVLNH-GVHVSFLVITTNEASAAK---NNLLRSL----PHGLDVVDLPPVDVSAVT 78 (476)
Q Consensus 7 ~~rIll~~~p~~GHi~P~l~La~~L~~rG-~h~V~~~~~~~~~~~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~ 78 (476)
|+||+++|+|++||++||+.||+.|+.+| +..|||+++.. +.... ...++.. ..+++|+.++.+....
T Consensus 2 ~~hvvl~P~paqGHi~P~l~LAk~La~~G~~~~vT~v~t~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~-- 77 (481)
T PLN02554 2 KIELVFIPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPS--RSGDDASSSAYIASLSASSEDRLRYEVISAGDQPT-- 77 (481)
T ss_pred ceEEEEeCCcchhhHHHHHHHHHHHHhCCCCEEEEEEeCCC--ccchhhhhhhhhhhcccCCCCCeEEEEcCCCCCCc--
Confidence 68999999999999999999999999997 25688888663 43211 1111111 1169999998654211
Q ss_pred CCCCchHHHHHHHHHHhhcHHHHHHHHhc-------C-CC-CEEEECCCcchHHHHHHHcCCCeEEEecccHHHHHHHhh
Q 046326 79 SDDMPVVTRLHAIVEESLSKSLKSVLTEL-------C-NP-NALVIDLFCTQAFEICSQLSIPTYSFVTTSVHFFAFITY 149 (476)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~-~p-DlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~ 149 (476)
.. .. .+...+....+ .+++.++++ . +| +|||+|.++.|+.++|+++|||++.|++++++.++.+.+
T Consensus 78 -~~-~~--~~~~~~~~~~~-~~~~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~ 152 (481)
T PLN02554 78 -TE-DP--TFQSYIDNQKP-KVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLH 152 (481)
T ss_pred -cc-ch--HHHHHHHHHHH-HHHHHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHHh
Confidence 11 11 22223333333 344444432 1 23 799999999999999999999999999999999999888
Q ss_pred cccccccccCC---CCCCCCCccCCCCC-CCCccccCcccccCChhHHHHHHHHhhccCCCcEEEEcCccccchhHHHHh
Q 046326 150 LPTLDHEVQGE---FVDLPEPIKIPGCP-PVRPEDLLDQVRNRKIDEYKFFLLHVSRLPLAAGIFLNSWENLEFVPLKAI 225 (476)
Q Consensus 150 ~p~~~~~~~~~---~~~~~~~~~~p~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~ 225 (476)
+|........+ +.+......+|+++ +++..+++..+..+ ..+..+.+......+.+++++|+|.+||+.+...+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~v~iPgl~~pl~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~~l 230 (481)
T PLN02554 153 VQMLYDEKKYDVSELEDSEVELDVPSLTRPYPVKCLPSVLLSK--EWLPLFLAQARRFREMKGILVNTVAELEPQALKFF 230 (481)
T ss_pred hhhhccccccCccccCCCCceeECCCCCCCCCHHHCCCcccCH--HHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHH
Confidence 77643221111 11111234588874 77777877655432 33455566667778899999999999999999998
Q ss_pred hhcccCCCCCCCCeEeecCCCC-CCCCC---CCChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHhCCCce
Q 046326 226 GEHSFYLQIPTPPINPIGPLIK-QDEPL---SASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQRF 301 (476)
Q Consensus 226 ~~~~~~~~~~~p~~~~vGpl~~-~~~~~---~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~ 301 (476)
.+.. + ..|+++.|||+.. ..... ...+++|.+|||++++++||||||||+...+.+++.+++.+|+.++++|
T Consensus 231 ~~~~--~--~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~f 306 (481)
T PLN02554 231 SGSS--G--DLPPVYPVGPVLHLENSGDDSKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRF 306 (481)
T ss_pred Hhcc--c--CCCCEEEeCCCccccccccccccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCe
Confidence 8742 1 2368999999943 22111 1345789999999988899999999998889999999999999999999
Q ss_pred EEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCCeEeccccchHHhhccCCccceecccCchHHHHHHhc
Q 046326 302 IWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPSTGGFLSHCGWNSTLESICH 381 (476)
Q Consensus 302 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~~ 381 (476)
||+++...... ... .. .+..+....+|++|.++++. |+++++|+||.+||.|+++++|||||||||++||+++
T Consensus 307 lW~~~~~~~~~-~~~-~~--~~~~~~~~~lp~~~~~r~~~---~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~ 379 (481)
T PLN02554 307 LWSLRRASPNI-MKE-PP--GEFTNLEEILPEGFLDRTKD---IGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWF 379 (481)
T ss_pred EEEEcCCcccc-ccc-cc--ccccchhhhCChHHHHHhcc---CceEEeeCCHHHHhCCcccCcccccCccchHHHHHHc
Confidence 99997531100 000 00 00001113468999988874 5566799999999999999999999999999999999
Q ss_pred CCcEeeccccchhhhhhh-hhcceeeeeEEecccc-------CCCCCcCHHHHHHHHHHHhc-CChhHHHHHHHHHHHHH
Q 046326 382 GVPMIAWPLYAEQRMNAA-MLTAEETGVAVKPETE-------PGKKVIGREEIERVVRLVME-GEEGKVMRRRVQELKES 452 (476)
Q Consensus 382 GvP~l~~P~~~DQ~~na~-~~~~~~~G~G~~l~~~-------~~~~~~~~~~l~~ai~~~l~-~~~~~~~~~~a~~l~~~ 452 (476)
|||||++|+++||+.||+ ++ +++|+|+.+.++ .+.+.+++++|+++|+++|+ +++ ||+||+++++.
T Consensus 380 GVP~l~~P~~~DQ~~Na~~~v--~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~---~r~~a~~l~~~ 454 (481)
T PLN02554 380 GVPMAAWPLYAEQKFNAFEMV--EELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQDSD---VRKRVKEMSEK 454 (481)
T ss_pred CCCEEecCccccchhhHHHHH--HHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCCHH---HHHHHHHHHHH
Confidence 999999999999999995 56 899999998631 01246899999999999996 555 99999999999
Q ss_pred HHHHhccCCChHHHHHHHHHHhhC
Q 046326 453 ASRELGDGGSSSDSLASFIKKCKH 476 (476)
Q Consensus 453 ~~~~~~~~g~~~~~~~~~~~~~~~ 476 (476)
+++++++||||.+++++||++++.
T Consensus 455 ~~~av~~gGss~~~l~~lv~~~~~ 478 (481)
T PLN02554 455 CHVALMDGGSSHTALKKFIQDVTK 478 (481)
T ss_pred HHHHhcCCChHHHHHHHHHHHHHh
Confidence 999999999999999999999863
No 20
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=2.9e-64 Score=508.02 Aligned_cols=431 Identities=30% Similarity=0.463 Sum_probs=332.7
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhc--CCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCC
Q 046326 4 ESLQPHVAVLPSPGLGHLIPLLEFAKRLVLN--HGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDD 81 (476)
Q Consensus 4 ~~~~~rIll~~~p~~GHi~P~l~La~~L~~r--G~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (476)
...+.||+++|+|++||++||+.||++|+.| | |+|||++++. +...+..... +.+++|+.++....++. ...
T Consensus 7 ~~~~~hVvlvp~pa~GHi~P~l~LA~~L~~~~~G-~~VT~~~t~~--~~~~i~~~~~--~~gi~fv~lp~~~p~~~-~~~ 80 (459)
T PLN02448 7 PTTSCHVVAMPYPGRGHINPMMNLCKLLASRKPD-ILITFVVTEE--WLGLIGSDPK--PDNIRFATIPNVIPSEL-VRA 80 (459)
T ss_pred CCCCcEEEEECCcccccHHHHHHHHHHHHcCCCC-cEEEEEeCCc--hHhHhhccCC--CCCEEEEECCCCCCCcc-ccc
Confidence 4678999999999999999999999999999 9 9999999874 4443333221 22799999985322222 222
Q ss_pred CchHHHHHHHHHHhhcHHHHHHHHhcC-CCCEEEECCCcchHHHHHHHcCCCeEEEecccHHHHHHHhhcccccccccCC
Q 046326 82 MPVVTRLHAIVEESLSKSLKSVLTELC-NPNALVIDLFCTQAFEICSQLSIPTYSFVTTSVHFFAFITYLPTLDHEVQGE 160 (476)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~l~~~~-~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 160 (476)
.+....+........+ .++++++++. ++||||+|.+++|+..+|+++|||++.++++++..++.+.+++........+
T Consensus 81 ~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~ 159 (459)
T PLN02448 81 ADFPGFLEAVMTKMEA-PFEQLLDRLEPPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFP 159 (459)
T ss_pred cCHHHHHHHHHHHhHH-HHHHHHHhcCCCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccCCC
Confidence 2333333333334556 7888888753 6899999999999999999999999999999998888777766433211111
Q ss_pred CCCC---CC-CccCCCCCCCCccccCcccccCChhHHHHHHHHhhccCCCcEEEEcCccccchhHHHHhhhcccCCCCCC
Q 046326 161 FVDL---PE-PIKIPGCPPVRPEDLLDQVRNRKIDEYKFFLLHVSRLPLAAGIFLNSWENLEFVPLKAIGEHSFYLQIPT 236 (476)
Q Consensus 161 ~~~~---~~-~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~ 236 (476)
.... .. ...+|+++++...+++..+.......++.+........+.+++++|||++||+.++.++.... +
T Consensus 160 ~~~~~~~~~~~~~iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~--~---- 233 (459)
T PLN02448 160 VELSESGEERVDYIPGLSSTRLSDLPPIFHGNSRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKF--P---- 233 (459)
T ss_pred CccccccCCccccCCCCCCCChHHCchhhcCCchHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhc--C----
Confidence 1110 01 123778877777777765544333445666666666777889999999999999988886543 1
Q ss_pred CCeEeecCCCCCCCC---C-----CCChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEEecC
Q 046326 237 PPINPIGPLIKQDEP---L-----SASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQRFIWVVRMP 308 (476)
Q Consensus 237 p~~~~vGpl~~~~~~---~-----~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 308 (476)
++++.|||+.+.... . +..+.+|.+||+.++++++|||||||+.....+++.+++++|+.++++|||+.+..
T Consensus 234 ~~~~~iGP~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~ 313 (459)
T PLN02448 234 FPVYPIGPSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGE 313 (459)
T ss_pred CceEEecCcccccccCCCccccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 479999999753110 0 01224799999999888999999999988889999999999999999999987532
Q ss_pred CCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCCeEeccccchHHhhccCCccceecccCchHHHHHHhcCCcEeec
Q 046326 309 SDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPSTGGFLSHCGWNSTLESICHGVPMIAW 388 (476)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 388 (476)
. .++.++.. +|+++.+|+||.+||+|+++++|||||||||++||+++|||||++
T Consensus 314 ~-----------------------~~~~~~~~---~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~ 367 (459)
T PLN02448 314 A-----------------------SRLKEICG---DMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTF 367 (459)
T ss_pred h-----------------------hhHhHhcc---CCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEec
Confidence 1 22333332 467778999999999999999999999999999999999999999
Q ss_pred cccchhhhhhhhhccee-eeeEEecccc-CCCCCcCHHHHHHHHHHHhcCC--hhHHHHHHHHHHHHHHHHHhccCCChH
Q 046326 389 PLYAEQRMNAAMLTAEE-TGVAVKPETE-PGKKVIGREEIERVVRLVMEGE--EGKVMRRRVQELKESASRELGDGGSSS 464 (476)
Q Consensus 389 P~~~DQ~~na~~~~~~~-~G~G~~l~~~-~~~~~~~~~~l~~ai~~~l~~~--~~~~~~~~a~~l~~~~~~~~~~~g~~~ 464 (476)
|+++||+.||+++ ++ +|+|+.+... .+...+++++|+++|+++|.++ +++.||+||++|++.+++++.+||||+
T Consensus 368 P~~~DQ~~na~~v--~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~ 445 (459)
T PLN02448 368 PLFWDQPLNSKLI--VEDWKIGWRVKREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSD 445 (459)
T ss_pred cccccchhhHHHH--HHHhCceEEEecccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHH
Confidence 9999999999999 55 6888887641 1123579999999999999864 478899999999999999999999999
Q ss_pred HHHHHHHHHhh
Q 046326 465 DSLASFIKKCK 475 (476)
Q Consensus 465 ~~~~~~~~~~~ 475 (476)
+++++||++++
T Consensus 446 ~~l~~~v~~~~ 456 (459)
T PLN02448 446 TNLDAFIRDIS 456 (459)
T ss_pred HHHHHHHHHHh
Confidence 99999999986
No 21
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=7.8e-64 Score=507.34 Aligned_cols=440 Identities=30% Similarity=0.494 Sum_probs=320.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcC----CC-CceEEEcCCCCCC-CCC
Q 046326 5 SLQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSL----PH-GLDVVDLPPVDVS-AVT 78 (476)
Q Consensus 5 ~~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~-~~~ 78 (476)
++++||+++|+|++||++|++.||++|++|| |+|||++++. +...++...+.+ +. .+++..++.+..+ ++
T Consensus 3 ~~~~hVvlvp~pa~GHi~P~L~LAk~L~~rG-~~VT~vtt~~--~~~~i~~~~a~~~~~~~~~~~~~~~~~~p~~~~gl- 78 (482)
T PLN03007 3 HEKLHILFFPFMAHGHMIPTLDMAKLFSSRG-AKSTILTTPL--NAKIFEKPIEAFKNLNPGLEIDIQIFNFPCVELGL- 78 (482)
T ss_pred CCCcEEEEECCCccccHHHHHHHHHHHHhCC-CEEEEEECCC--chhhhhhhhhhhcccCCCCcceEEEeeCCCCcCCC-
Confidence 4578999999999999999999999999999 9999999874 544444332221 10 2344444443221 22
Q ss_pred CCCC---------------chHHHHHHHHHHhhcHHHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEecccHHH
Q 046326 79 SDDM---------------PVVTRLHAIVEESLSKSLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFVTTSVHF 143 (476)
Q Consensus 79 ~~~~---------------~~~~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~ 143 (476)
+.+. ++...+........+ .+++++++. +|||||+|.+++|+..+|+++|||.++|++++++.
T Consensus 79 P~g~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~l~~~l~~~-~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~ 156 (482)
T PLN03007 79 PEGCENVDFITSNNNDDSGDLFLKFLFSTKYFKD-QLEKLLETT-RPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFS 156 (482)
T ss_pred CCCcccccccccccccchHHHHHHHHHHHHHHHH-HHHHHHhcC-CCCEEEECCcchhHHHHHHHhCCCeEEeecccHHH
Confidence 3221 111112222233444 566666655 99999999999999999999999999999999887
Q ss_pred HHHHhhcccccccccCCCCCCCCCccCCCCCC---CCccccCcccccCChhHHHHHHHHhhccCCCcEEEEcCccccchh
Q 046326 144 FAFITYLPTLDHEVQGEFVDLPEPIKIPGCPP---VRPEDLLDQVRNRKIDEYKFFLLHVSRLPLAAGIFLNSWENLEFV 220 (476)
Q Consensus 144 ~~~~~~~p~~~~~~~~~~~~~~~~~~~p~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~ 220 (476)
...+..+........ .........+|++++ +...+++.. +........+........+.+++++|++.+||..
T Consensus 157 ~~~~~~~~~~~~~~~--~~~~~~~~~~pg~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~ 232 (482)
T PLN03007 157 LCASYCIRVHKPQKK--VASSSEPFVIPDLPGDIVITEEQINDA--DEESPMGKFMKEVRESEVKSFGVLVNSFYELESA 232 (482)
T ss_pred HHHHHHHHhcccccc--cCCCCceeeCCCCCCccccCHHhcCCC--CCchhHHHHHHHHHhhcccCCEEEEECHHHHHHH
Confidence 766553321100000 000011223566642 233333321 1222222333333445677889999999999998
Q ss_pred HHHHhhhcccCCCCCCCCeEeecCCCCCCCC-------C---CCChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHH
Q 046326 221 PLKAIGEHSFYLQIPTPPINPIGPLIKQDEP-------L---SASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEM 290 (476)
Q Consensus 221 ~~~~~~~~~~~~~~~~p~~~~vGpl~~~~~~-------~---~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~ 290 (476)
+..++.+.. + +++++|||+...... . +..+.+|.+|||++++++||||||||+...+.+++.++
T Consensus 233 ~~~~~~~~~--~----~~~~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~ 306 (482)
T PLN03007 233 YADFYKSFV--A----KRAWHIGPLSLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEI 306 (482)
T ss_pred HHHHHHhcc--C----CCEEEEccccccccccccccccCCccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHH
Confidence 888876543 1 469999997642210 0 01357799999999889999999999998889999999
Q ss_pred HHHHHhCCCceEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCCeEeccccchHHhhccCCccceeccc
Q 046326 291 AWGLEQSKQRFIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPSTGGFLSHC 370 (476)
Q Consensus 291 ~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~~~~I~Hg 370 (476)
+++|+.++++|||+++...... +....+|++|.+++.. +|+++.+|+||.+||+|+++++|||||
T Consensus 307 ~~~l~~~~~~flw~~~~~~~~~-------------~~~~~lp~~~~~r~~~--~g~~v~~w~PQ~~iL~h~~v~~fvtH~ 371 (482)
T PLN03007 307 AAGLEGSGQNFIWVVRKNENQG-------------EKEEWLPEGFEERTKG--KGLIIRGWAPQVLILDHQATGGFVTHC 371 (482)
T ss_pred HHHHHHCCCCEEEEEecCCccc-------------chhhcCCHHHHHHhcc--CCEEEecCCCHHHHhccCccceeeecC
Confidence 9999999999999998642100 1123589999999887 899999999999999999999999999
Q ss_pred CchHHHHHHhcCCcEeeccccchhhhhhhhhcce--eeeeEEecccc--CCCCCcCHHHHHHHHHHHhcCChhHHHHHHH
Q 046326 371 GWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAE--ETGVAVKPETE--PGKKVIGREEIERVVRLVMEGEEGKVMRRRV 446 (476)
Q Consensus 371 G~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~--~~G~G~~l~~~--~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a 446 (476)
||||++||+++|||||++|+++||+.||+++ ++ +.|+|+..... .+...+++++|+++|+++|.+++++.||+||
T Consensus 372 G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~-~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a 450 (482)
T PLN03007 372 GWNSLLEGVAAGLPMVTWPVGAEQFYNEKLV-TQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRA 450 (482)
T ss_pred cchHHHHHHHcCCCeeeccchhhhhhhHHHH-HHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 9999999999999999999999999999988 33 44555432110 0124689999999999999988777899999
Q ss_pred HHHHHHHHHHhccCCChHHHHHHHHHHhhC
Q 046326 447 QELKESASRELGDGGSSSDSLASFIKKCKH 476 (476)
Q Consensus 447 ~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 476 (476)
+++++.+++++.+||||++++++||++++.
T Consensus 451 ~~~~~~a~~a~~~gGsS~~~l~~~v~~~~~ 480 (482)
T PLN03007 451 KKLAEMAKAAVEEGGSSFNDLNKFMEELNS 480 (482)
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 999999999999999999999999998863
No 22
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=7.5e-47 Score=383.83 Aligned_cols=386 Identities=16% Similarity=0.183 Sum_probs=264.7
Q ss_pred CCEEEEE-cCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCC--C------CC
Q 046326 7 QPHVAVL-PSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDV--S------AV 77 (476)
Q Consensus 7 ~~rIll~-~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~ 77 (476)
..||+.+ |.++.+|+.-+-.|+++|++|| |+||++++...... ... ... +++...++.... . ..
T Consensus 20 ~~kIl~~~P~~~~SH~~~~~~l~~~La~rG-H~VTvi~p~~~~~~---~~~--~~~-~~~~i~~~~~~~~~~~~~~~~~~ 92 (507)
T PHA03392 20 AARILAVFPTPAYSHHSVFKVYVEALAERG-HNVTVIKPTLRVYY---ASH--LCG-NITEIDASLSVEYFKKLVKSSAV 92 (507)
T ss_pred cccEEEEcCCCCCcHHHHHHHHHHHHHHcC-CeEEEEeccccccc---ccC--CCC-CEEEEEcCCChHHHHHHHhhhhH
Confidence 4568755 8899999999999999999999 99999987530000 000 111 455444431100 0 00
Q ss_pred CCC-C--Cc---h-HHHHHHHHH-----HhhcHHHHHHHH--hcCCCCEEEECCCcchHHHHHHHc-CCCeEEEecccHH
Q 046326 78 TSD-D--MP---V-VTRLHAIVE-----ESLSKSLKSVLT--ELCNPNALVIDLFCTQAFEICSQL-SIPTYSFVTTSVH 142 (476)
Q Consensus 78 ~~~-~--~~---~-~~~~~~~~~-----~~~~~~l~~~l~--~~~~pDlVI~D~~~~~~~~~A~~l-gIP~v~~~~~~~~ 142 (476)
... . .+ . ...+..... ...+ .+.++|+ +. ++|+||+|.+..|+..+|+.+ ++|.|.++++...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~L~~~~~-kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~ 170 (507)
T PHA03392 93 FRKRGVVADSSTVTADNYMGLVRMISDQFDLP-NVKNLIANKNN-KFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGL 170 (507)
T ss_pred HHhhhhhhhHHHHHHHHHHHHHHHHHHHHCCH-HHHHHHhcCCC-ceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCc
Confidence 000 0 00 0 000011111 1223 5677776 44 899999999888888899999 9999888776543
Q ss_pred HH-HHHhhcccccccccCCCCCCCCCccCCCCCCCCccccCcc--cccCChhHHH---------HHHHHhh-ccCCCcEE
Q 046326 143 FF-AFITYLPTLDHEVQGEFVDLPEPIKIPGCPPVRPEDLLDQ--VRNRKIDEYK---------FFLLHVS-RLPLAAGI 209 (476)
Q Consensus 143 ~~-~~~~~~p~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~--~~~~~~~~~~---------~~~~~~~-~~~~~~~~ 209 (476)
.. ..... ..+..|.+.|.......+. +++|...++. .+..... ..++..+.
T Consensus 171 ~~~~~~~g----------------g~p~~~syvP~~~~~~~~~Msf~~R~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~~ 234 (507)
T PHA03392 171 AENFETMG----------------AVSRHPVYYPNLWRSKFGNLNVWETINEIYTELRLYNEFSLLADEQNKLLKQQFGP 234 (507)
T ss_pred hhHHHhhc----------------cCCCCCeeeCCcccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHcCC
Confidence 21 11111 0111233434333333333 4555322210 0000111 11122121
Q ss_pred EEcCccccchhHHHHhhhcc---cCCCCCCCCeEeecCCCCCCCCCCCChhhHhhhccCCCCCcEEEEecCCCCC---CC
Q 046326 210 FLNSWENLEFVPLKAIGEHS---FYLQIPTPPINPIGPLIKQDEPLSASDEECLAWLDKQPPDSVLFAVPGSGGT---LT 283 (476)
Q Consensus 210 ~~~s~~~le~~~~~~~~~~~---~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~---~~ 283 (476)
-.+++.++..+....+.|++ ...+|..|++++|||++.+.....++++++.+|++.++ +++|||||||+.. .+
T Consensus 235 ~~~~~~~l~~~~~l~lvns~~~~d~~rp~~p~v~~vGgi~~~~~~~~~l~~~l~~fl~~~~-~g~V~vS~GS~~~~~~~~ 313 (507)
T PHA03392 235 DTPTIRELRNRVQLLFVNVHPVFDNNRPVPPSVQYLGGLHLHKKPPQPLDDYLEEFLNNST-NGVVYVSFGSSIDTNDMD 313 (507)
T ss_pred CCCCHHHHHhCCcEEEEecCccccCCCCCCCCeeeecccccCCCCCCCCCHHHHHHHhcCC-CcEEEEECCCCCcCCCCC
Confidence 12455666666666666665 12367777899999998743222267899999999875 3699999999853 46
Q ss_pred HHHHHHHHHHHHhCCCceEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCCeEeccccchHHhhccCCc
Q 046326 284 AEQVTEMAWGLEQSKQRFIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPST 363 (476)
Q Consensus 284 ~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~ 363 (476)
.+.++.+++++++.+++|||+.+.... ...+| +|+++.+|+||.+||+|+.+
T Consensus 314 ~~~~~~~l~a~~~l~~~viw~~~~~~~-----------------~~~~p-----------~Nv~i~~w~Pq~~lL~hp~v 365 (507)
T PHA03392 314 NEFLQMLLRTFKKLPYNVLWKYDGEVE-----------------AINLP-----------ANVLTQKWFPQRAVLKHKNV 365 (507)
T ss_pred HHHHHHHHHHHHhCCCeEEEEECCCcC-----------------cccCC-----------CceEEecCCCHHHHhcCCCC
Confidence 788899999999999999999875311 11245 89999999999999999999
Q ss_pred cceecccCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCChhHHHH
Q 046326 364 GGFLSHCGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGEEGKVMR 443 (476)
Q Consensus 364 ~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~ 443 (476)
++||||||+||++||+++|||||++|+++||+.||+|+ +++|+|+.++. .++++++|.++|+++++|++ |+
T Consensus 366 ~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv--~~~G~G~~l~~----~~~t~~~l~~ai~~vl~~~~---y~ 436 (507)
T PHA03392 366 KAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKY--VELGIGRALDT----VTVSAAQLVLAIVDVIENPK---YR 436 (507)
T ss_pred CEEEecCCcccHHHHHHcCCCEEECCCCccHHHHHHHH--HHcCcEEEecc----CCcCHHHHHHHHHHHhCCHH---HH
Confidence 99999999999999999999999999999999999999 99999999998 78999999999999999988 99
Q ss_pred HHHHHHHHHHHH
Q 046326 444 RRVQELKESASR 455 (476)
Q Consensus 444 ~~a~~l~~~~~~ 455 (476)
+||+++++.++.
T Consensus 437 ~~a~~ls~~~~~ 448 (507)
T PHA03392 437 KNLKELRHLIRH 448 (507)
T ss_pred HHHHHHHHHHHh
Confidence 999999999984
No 23
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=1.4e-48 Score=402.95 Aligned_cols=382 Identities=22% Similarity=0.282 Sum_probs=231.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCC-CchHH-
Q 046326 9 HVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDD-MPVVT- 86 (476)
Q Consensus 9 rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~- 86 (476)
+|+++|. +.||+.++..|+++|++|| |+||++++.. + ..... ..+..+++..++........... .+...
T Consensus 2 kvLv~p~-~~SH~~~~~~l~~~L~~rG-H~VTvl~~~~--~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (500)
T PF00201_consen 2 KVLVFPM-AYSHFIFMRPLAEELAERG-HNVTVLTPSP--S-SSLNP---SKPSNIRFETYPDPYPEEEFEEIFPEFISK 73 (500)
T ss_dssp -----------SHHHHHHHHHHHHHH--TTSEEEHHHH--H-HT---------S-CCEEEE-----TT------TTHHHH
T ss_pred EEEEeCC-CcCHHHHHHHHHHHHHhcC-CceEEEEeec--c-ccccc---ccccceeeEEEcCCcchHHHhhhhHHHHHH
Confidence 6788875 8899999999999999999 9999998652 1 11110 11125666666543222110111 11110
Q ss_pred ---------HHHHHHHH-----------h-----hcHHHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEecccH
Q 046326 87 ---------RLHAIVEE-----------S-----LSKSLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFVTTSV 141 (476)
Q Consensus 87 ---------~~~~~~~~-----------~-----~~~~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~ 141 (476)
.+...... | .. .+.+.+++. ++|++|+|.+.+|+..+|+.++||.+.+.+...
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~l~d~-~l~~~l~~~-~fDlvI~d~f~~c~~~la~~l~iP~i~~~s~~~ 151 (500)
T PF00201_consen 74 FFSESSFANSFWEMFKMLNAFFDFFSKSCEDLLSDP-ELMEQLKSE-KFDLVISDAFDPCGLALAHYLGIPVIIISSSTP 151 (500)
T ss_dssp HHHHHCCHHHHHHHHHHHHCHHHS----E--EEEET-TSTTHHHHH-HHCT-EEEEEESSHHHHHHHHHHTHHHHHHCCS
T ss_pred HhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhHH-HHHHHHHhh-ccccceEeeccchhHHHHHHhcCCeEEEecccc
Confidence 01111110 0 01 122233333 899999999988888899999999886544322
Q ss_pred HHHHHHhhcccccccccCCCCCCCCCccCCCCCCCCccccCcc--cccCChhHH-HHH----HHHhhccCCCcEEEE---
Q 046326 142 HFFAFITYLPTLDHEVQGEFVDLPEPIKIPGCPPVRPEDLLDQ--VRNRKIDEY-KFF----LLHVSRLPLAAGIFL--- 211 (476)
Q Consensus 142 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~--~~~~~~~~~-~~~----~~~~~~~~~~~~~~~--- 211 (476)
. +.... .....+..|++.|.....+.+. +.+|....+ ... ...............
T Consensus 152 ~--------~~~~~-------~~~g~p~~psyvP~~~s~~~~~msf~~Ri~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (500)
T PF00201_consen 152 M--------YDLSS-------FSGGVPSPPSYVPSMFSDFSDRMSFWQRIKNFLFYLYFRFIFRYFFSPQDKLYKKYFGF 216 (500)
T ss_dssp C--------SCCTC-------CTSCCCTSTTSTTCBCCCSGTTSSSST--TTSHHHHHHHHHHHHGGGS-TTS-EEESS-
T ss_pred c--------chhhh-------hccCCCCChHHhccccccCCCccchhhhhhhhhhhhhhccccccchhhHHHHHhhhccc
Confidence 1 00000 0001233456656555555544 455533222 111 111111111111111
Q ss_pred -cCccccchhHHHHhhhcc--c-CCCCCCCCeEeecCCCCCCCCCCCChhhHhhhccCCCCCcEEEEecCCCCCCCH-HH
Q 046326 212 -NSWENLEFVPLKAIGEHS--F-YLQIPTPPINPIGPLIKQDEPLSASDEECLAWLDKQPPDSVLFAVPGSGGTLTA-EQ 286 (476)
Q Consensus 212 -~s~~~le~~~~~~~~~~~--~-~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~-~~ 286 (476)
.+..++.......+.+.. + .++|..|+++++|+++..+.. +++.++..|++...++++|||||||+....+ +.
T Consensus 217 ~~~~~~~~~~~~l~l~ns~~~ld~prp~~p~v~~vGgl~~~~~~--~l~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~ 294 (500)
T PF00201_consen 217 PFSFRELLSNASLVLINSHPSLDFPRPLLPNVVEVGGLHIKPAK--PLPEELWNFLDSSGKKGVVYVSFGSIVSSMPEEK 294 (500)
T ss_dssp GGGCHHHHHHHHHCCSSTEEE----HHHHCTSTTGCGC-S------TCHHHHHHHTSTTTTTEEEEEE-TSSSTT-HHHH
T ss_pred ccccHHHHHHHHHHhhhccccCcCCcchhhcccccCcccccccc--ccccccchhhhccCCCCEEEEecCcccchhHHHH
Confidence 122333334445555555 1 126677889999999766543 6889999999985556799999999975444 44
Q ss_pred HHHHHHHHHhCCCceEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCCeEeccccchHHhhccCCccce
Q 046326 287 VTEMAWGLEQSKQRFIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPSTGGF 366 (476)
Q Consensus 287 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~~~~ 366 (476)
.+.+++++++.+++|||++++... ..+| +|+++.+|+||.+||+|+++++|
T Consensus 295 ~~~~~~~~~~~~~~~iW~~~~~~~------------------~~l~-----------~n~~~~~W~PQ~~lL~hp~v~~f 345 (500)
T PF00201_consen 295 LKEIAEAFENLPQRFIWKYEGEPP------------------ENLP-----------KNVLIVKWLPQNDLLAHPRVKLF 345 (500)
T ss_dssp HHHHHHHHHCSTTEEEEEETCSHG------------------CHHH-----------TTEEEESS--HHHHHTSTTEEEE
T ss_pred HHHHHHHHhhCCCccccccccccc------------------cccc-----------ceEEEeccccchhhhhcccceee
Confidence 788999999999999999965211 1123 79999999999999999999999
Q ss_pred ecccCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCChhHHHHHHH
Q 046326 367 LSHCGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGEEGKVMRRRV 446 (476)
Q Consensus 367 I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a 446 (476)
|||||+||++||+++|||||++|+++||+.||+++ ++.|+|+.++. ..+|+++|.++|+++|+|++ |++||
T Consensus 346 itHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~--~~~G~g~~l~~----~~~~~~~l~~ai~~vl~~~~---y~~~a 416 (500)
T PF00201_consen 346 ITHGGLNSTQEALYHGVPMLGIPLFGDQPRNAARV--EEKGVGVVLDK----NDLTEEELRAAIREVLENPS---YKENA 416 (500)
T ss_dssp EES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHH--HHTTSEEEEGG----GC-SHHHHHHHHHHHHHSHH---HHHHH
T ss_pred eeccccchhhhhhhccCCccCCCCcccCCccceEE--EEEeeEEEEEe----cCCcHHHHHHHHHHHHhhhH---HHHHH
Confidence 99999999999999999999999999999999999 99999999998 78999999999999999998 99999
Q ss_pred HHHHHHHHH
Q 046326 447 QELKESASR 455 (476)
Q Consensus 447 ~~l~~~~~~ 455 (476)
+++++.++.
T Consensus 417 ~~ls~~~~~ 425 (500)
T PF00201_consen 417 KRLSSLFRD 425 (500)
T ss_dssp HHHHHTTT-
T ss_pred HHHHHHHhc
Confidence 999999874
No 24
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=100.00 E-value=5.2e-43 Score=351.86 Aligned_cols=367 Identities=16% Similarity=0.126 Sum_probs=236.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCC---CC----
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVT---SD---- 80 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---- 80 (476)
|||+|+++|+.||++|+++||++|++|| |+|+|++.+. ++..++.. |++|+.++........ ..
T Consensus 1 mrIl~~~~p~~GHv~P~l~la~~L~~rG-h~V~~~t~~~------~~~~v~~~--G~~~~~~~~~~~~~~~~~~~~~~~~ 71 (401)
T cd03784 1 MRVLITTIGSRGDVQPLVALAWALRAAG-HEVRVATPPE------FADLVEAA--GLEFVPVGGDPDELLASPERNAGLL 71 (401)
T ss_pred CeEEEEeCCCcchHHHHHHHHHHHHHCC-CeEEEeeCHh------HHHHHHHc--CCceeeCCCCHHHHHhhhhhccccc
Confidence 6999999999999999999999999999 9999999874 33444443 8999888753211000 00
Q ss_pred -C--CchHHH---HHHHHHHhhcHHHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEecccHHHHHHHhhccccc
Q 046326 81 -D--MPVVTR---LHAIVEESLSKSLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFVTTSVHFFAFITYLPTLD 154 (476)
Q Consensus 81 -~--~~~~~~---~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~ 154 (476)
. ...... +......... .+.+.++++ +||+||+|.+.+++..+|+++|||++.+++++......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~-------- 141 (401)
T cd03784 72 LLGPGLLLGALRLLRREAEAMLD-DLVAAARDW-GPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPTSA-------- 141 (401)
T ss_pred ccchHHHHHHHHHHHHHHHHHHH-HHHHHhccc-CCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCcccc--------
Confidence 0 011111 1111112222 333333345 99999999988888889999999999998866431000
Q ss_pred ccccCCCCCCCCCccCCCCCCCCccccCcccccC--ChhHHHHHHHHhhccCCCcEEEEcC-ccccchhHHHHhhhcccC
Q 046326 155 HEVQGEFVDLPEPIKIPGCPPVRPEDLLDQVRNR--KIDEYKFFLLHVSRLPLAAGIFLNS-WENLEFVPLKAIGEHSFY 231 (476)
Q Consensus 155 ~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s-~~~le~~~~~~~~~~~~~ 231 (476)
. .| +... ........ ...............++..|+-... +..........+.+..++
T Consensus 142 -------------~-~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 202 (401)
T cd03784 142 -------------F-PP---PLGR--ANLRLYALLEAELWQDLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAVLP 202 (401)
T ss_pred -------------C-CC---ccch--HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCcEEEecCcccCC
Confidence 0 00 0000 00000000 0000011111111112222211000 000000111111112122
Q ss_pred CCCCCCC-eEeec-CCCCCCCCCCCChhhHhhhccCCCCCcEEEEecCCCCCCCH-HHHHHHHHHHHhCCCceEEEEecC
Q 046326 232 LQIPTPP-INPIG-PLIKQDEPLSASDEECLAWLDKQPPDSVLFAVPGSGGTLTA-EQVTEMAWGLEQSKQRFIWVVRMP 308 (476)
Q Consensus 232 ~~~~~p~-~~~vG-pl~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~-~~~~~~~~al~~~~~~~i~~~~~~ 308 (476)
.+++|+. ..++| ++...+.. ...+.++..|++... ++|||+|||+..... +.+..++++++..+.++||+++..
T Consensus 203 ~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~--~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~ 279 (401)
T cd03784 203 PPPDWPRFDLVTGYGFRDVPYN-GPPPPELWLFLAAGR--PPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGWG 279 (401)
T ss_pred CCCCccccCcEeCCCCCCCCCC-CCCCHHHHHHHhCCC--CcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccCc
Confidence 3455664 66775 43332221 245677888987753 499999999976444 566778999999999999998764
Q ss_pred CCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCCeEeccccchHHhhccCCccceecccCchHHHHHHhcCCcEeec
Q 046326 309 SDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPSTGGFLSHCGWNSTLESICHGVPMIAW 388 (476)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 388 (476)
.. ....+| +|+++.+|+||.++|+++++ ||||||+||++|++++|||+|++
T Consensus 280 ~~----------------~~~~~~-----------~~v~~~~~~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~ 330 (401)
T cd03784 280 GL----------------GAEDLP-----------DNVRVVDFVPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVV 330 (401)
T ss_pred cc----------------cccCCC-----------CceEEeCCCCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEee
Confidence 22 001123 79999999999999999996 99999999999999999999999
Q ss_pred cccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHH
Q 046326 389 PLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGEEGKVMRRRVQELKESAS 454 (476)
Q Consensus 389 P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~ 454 (476)
|+..||+.||+++ ++.|+|+.+.. ..+++++|.++|+++++++ +++++++++++++
T Consensus 331 P~~~dQ~~~a~~~--~~~G~g~~l~~----~~~~~~~l~~al~~~l~~~----~~~~~~~~~~~~~ 386 (401)
T cd03784 331 PFFGDQPFWAARV--AELGAGPALDP----RELTAERLAAALRRLLDPP----SRRRAAALLRRIR 386 (401)
T ss_pred CCCCCcHHHHHHH--HHCCCCCCCCc----ccCCHHHHHHHHHHHhCHH----HHHHHHHHHHHHH
Confidence 9999999999999 99999999987 6689999999999999854 6666777777765
No 25
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=100.00 E-value=4.1e-42 Score=343.96 Aligned_cols=377 Identities=18% Similarity=0.225 Sum_probs=243.0
Q ss_pred EcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCC-CCCCCC--CchHHHHH
Q 046326 13 LPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVS-AVTSDD--MPVVTRLH 89 (476)
Q Consensus 13 ~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~ 89 (476)
+.+|+.||++|++.||++|+++| |+|+|++++. +...++.. |+.|+.++..... +..++. .+....+.
T Consensus 1 ~~~p~~Ghv~P~l~lA~~L~~~G-h~V~~~~~~~------~~~~v~~~--G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (392)
T TIGR01426 1 FNIPAHGHVNPTLGVVEELVARG-HRVTYATTEE------FAERVEAA--GAEFVLYGSALPPPDNPPENTEEEPIDIIE 71 (392)
T ss_pred CCCCccccccccHHHHHHHHhCC-CeEEEEeCHH------HHHHHHHc--CCEEEecCCcCccccccccccCcchHHHHH
Confidence 46899999999999999999999 9999999874 33444443 8999888753221 110110 12222222
Q ss_pred HHHHH---hhcHHHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEecccHHHHHHHhhcccccccccCCCCCCCC
Q 046326 90 AIVEE---SLSKSLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFVTTSVHFFAFITYLPTLDHEVQGEFVDLPE 166 (476)
Q Consensus 90 ~~~~~---~~~~~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 166 (476)
..... ..+ .+.+.+++. +||+||+|.+++++..+|+++|||+|.+++.+.... .+|.
T Consensus 72 ~~~~~~~~~~~-~l~~~~~~~-~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~----~~~~-------------- 131 (392)
T TIGR01426 72 KLLDEAEDVLP-QLEEAYKGD-RPDLIVYDIASWTGRLLARKWDVPVISSFPTFAANE----EFEE-------------- 131 (392)
T ss_pred HHHHHHHHHHH-HHHHHhcCC-CCCEEEECCccHHHHHHHHHhCCCEEEEehhhcccc----cccc--------------
Confidence 22222 222 344444455 999999999888998999999999998865432110 0010
Q ss_pred CccCCCCCCCCccccC-cccccCChhHHHHHHHHhhccCCCcEEEEcCccccc---hh-HHHHhhhcccCCCCCCC-CeE
Q 046326 167 PIKIPGCPPVRPEDLL-DQVRNRKIDEYKFFLLHVSRLPLAAGIFLNSWENLE---FV-PLKAIGEHSFYLQIPTP-PIN 240 (476)
Q Consensus 167 ~~~~p~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le---~~-~~~~~~~~~~~~~~~~p-~~~ 240 (476)
..+ +.....+. .....+ ....+....+.+++..|+-..+...+. .. .+......+.+.++.+| +++
T Consensus 132 --~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~ 203 (392)
T TIGR01426 132 --MVS---PAGEGSAEEGAIAER---GLAEYVARLSALLEEHGITTPPVEFLAAPRRDLNLVYTPKAFQPAGETFDDSFT 203 (392)
T ss_pred --ccc---ccchhhhhhhccccc---hhHHHHHHHHHHHHHhCCCCCCHHHHhcCCcCcEEEeCChHhCCCccccCCCeE
Confidence 000 10000000 000000 011111111122222221101111110 00 00001111112233445 599
Q ss_pred eecCCCCCCCCCCCChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEEecCCCCCcccccccc
Q 046326 241 PIGPLIKQDEPLSASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQRFIWVVRMPSDASASATFFNV 320 (476)
Q Consensus 241 ~vGpl~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~ 320 (476)
++||+...... ...|.....++++|||||||+.....+.+..+++++++.+.++||..+...+.
T Consensus 204 ~~Gp~~~~~~~-------~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~~--------- 267 (392)
T TIGR01426 204 FVGPCIGDRKE-------DGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVDP--------- 267 (392)
T ss_pred EECCCCCCccc-------cCCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCCh---------
Confidence 99998764321 22366666667799999999876666788889999999999999988654210
Q ss_pred CCCCCCCCCCCChhHHHhhhcCCCCeEeccccchHHhhccCCccceecccCchHHHHHHhcCCcEeeccccchhhhhhhh
Q 046326 321 GSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLYAEQRMNAAM 400 (476)
Q Consensus 321 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~ 400 (476)
.....+| +|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||+.||++
T Consensus 268 -----~~~~~~~-----------~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~ 329 (392)
T TIGR01426 268 -----ADLGELP-----------PNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARR 329 (392)
T ss_pred -----hHhccCC-----------CCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHHhCCCEEecCCcccHHHHHHH
Confidence 0001122 78999999999999999995 99999999999999999999999999999999999
Q ss_pred hcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHH
Q 046326 401 LTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGGSSSDSLASFIKK 473 (476)
Q Consensus 401 ~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 473 (476)
+ ++.|+|+.+.. ..+++++|.++|+++++|++ |++++++++++++.. ++..++++.+.+.
T Consensus 330 l--~~~g~g~~l~~----~~~~~~~l~~ai~~~l~~~~---~~~~~~~l~~~~~~~----~~~~~aa~~i~~~ 389 (392)
T TIGR01426 330 I--AELGLGRHLPP----EEVTAEKLREAVLAVLSDPR---YAERLRKMRAEIREA----GGARRAADEIEGF 389 (392)
T ss_pred H--HHCCCEEEecc----ccCCHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHc----CCHHHHHHHHHHh
Confidence 9 99999999887 68999999999999999988 999999999998853 3444555544443
No 26
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=3.7e-40 Score=340.31 Aligned_cols=388 Identities=28% Similarity=0.404 Sum_probs=243.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCce---EEEcCCCCC-CCCCCCCC
Q 046326 7 QPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLD---VVDLPPVDV-SAVTSDDM 82 (476)
Q Consensus 7 ~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~ 82 (476)
+.+++++++|++||++|++.||++|+++| |+||++++.. +........... .+. ......... +.+ +...
T Consensus 5 ~~~~il~~~p~~sH~~~~~~la~~L~~~g-h~vt~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~ 78 (496)
T KOG1192|consen 5 KAHNILVPFPGQSHLNPMLQLAKRLAERG-HNVTVVTPSF--NALKLSKSSKSK--SIKKINPPPFEFLTIPDGL-PEGW 78 (496)
T ss_pred cceeEEEECCcccHHHHHHHHHHHHHHcC-CceEEEEeec--hhcccCCcccce--eeeeeecChHHhhhhhhhh-ccch
Confidence 56899999999999999999999999999 9999999774 221111100000 000 001111000 112 2222
Q ss_pred ch-----HHHHHHHHHHhhcHHHHHHHHhc---C--CCCEEEECCCcchHHHHHHHcC-CCeEEEecccHHHHHHHhhcc
Q 046326 83 PV-----VTRLHAIVEESLSKSLKSVLTEL---C--NPNALVIDLFCTQAFEICSQLS-IPTYSFVTTSVHFFAFITYLP 151 (476)
Q Consensus 83 ~~-----~~~~~~~~~~~~~~~l~~~l~~~---~--~pDlVI~D~~~~~~~~~A~~lg-IP~v~~~~~~~~~~~~~~~~p 151 (476)
.. ..........+.. .+++.+..+ . ++|++|+|.+..+...++.... |+..++.+.+........+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~ 157 (496)
T KOG1192|consen 79 EDDDLDISESLLELNKTCED-LLRDPLEKLLLLKSEKFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLPSP 157 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHhchHHHHHHhhcCCccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCCcCc
Confidence 11 1111222222333 333333222 2 4999999998667766676654 888888877776544433222
Q ss_pred cccccccCCCCCCCCCccCCCCCCCCccccCcccccCChhH----HH-------------HHHHH-hhcc----CCCcEE
Q 046326 152 TLDHEVQGEFVDLPEPIKIPGCPPVRPEDLLDQVRNRKIDE----YK-------------FFLLH-VSRL----PLAAGI 209 (476)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~----~~-------------~~~~~-~~~~----~~~~~~ 209 (476)
.. .+|........ -...+..+.... +. ..... .... ....++
T Consensus 158 ~~---------------~~p~~~~~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 221 (496)
T KOG1192|consen 158 LS---------------YVPSPFSLSSG-DDMSFPERVPNLIKKDLPSFLFSLSDDRKQDKISKELLGDILNWKPTASGI 221 (496)
T ss_pred cc---------------ccCcccCcccc-ccCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCCcccccccHHHh
Confidence 11 11111000000 000111111100 00 00000 0000 111233
Q ss_pred EEcC-ccccchhHHHHhhhcccCCCCCCCCeEeecCCCCCCCCCCCChhhHhhhccCCCCC--cEEEEecCCCC---CCC
Q 046326 210 FLNS-WENLEFVPLKAIGEHSFYLQIPTPPINPIGPLIKQDEPLSASDEECLAWLDKQPPD--SVLFAVPGSGG---TLT 283 (476)
Q Consensus 210 ~~~s-~~~le~~~~~~~~~~~~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~l~~~~~~--~vvyvs~GS~~---~~~ 283 (476)
+.++ +..++......+ ..+|..+++++|||+....... ....+.+|++..+.. ++|||||||+. ..+
T Consensus 222 ~~~~~~~~ln~~~~~~~-----~~~~~~~~v~~IG~l~~~~~~~--~~~~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp 294 (496)
T KOG1192|consen 222 IVNASFIFLNSNPLLDF-----EPRPLLPKVIPIGPLHVKDSKQ--KSPLPLEWLDILDESRHSVVYISFGSMVNSADLP 294 (496)
T ss_pred hhcCeEEEEccCcccCC-----CCCCCCCCceEECcEEecCccc--cccccHHHHHHHhhccCCeEEEECCcccccccCC
Confidence 4444 555555433222 1233457899999998873321 111455666666554 79999999998 788
Q ss_pred HHHHHHHHHHHHhC-CCceEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCCeEeccccchHHh-hccC
Q 046326 284 AEQVTEMAWGLEQS-KQRFIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHI-LRHP 361 (476)
Q Consensus 284 ~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~i-L~~~ 361 (476)
.++..+++.+++++ +++|||+++.... ..+++++.++ .. +|+...+|+||.++ |.|+
T Consensus 295 ~~~~~~l~~~l~~~~~~~FiW~~~~~~~------------------~~~~~~~~~~-~~--~nV~~~~W~PQ~~lll~H~ 353 (496)
T KOG1192|consen 295 EEQKKELAKALESLQGVTFLWKYRPDDS------------------IYFPEGLPNR-GR--GNVVLSKWAPQNDLLLDHP 353 (496)
T ss_pred HHHHHHHHHHHHhCCCceEEEEecCCcc------------------hhhhhcCCCC-Cc--CceEEecCCCcHHHhcCCC
Confidence 99999999999999 8899999976421 0012222221 12 57888899999998 5999
Q ss_pred CccceecccCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCChhHH
Q 046326 362 STGGFLSHCGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGEEGKV 441 (476)
Q Consensus 362 ~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~~~~ 441 (476)
++++||||||||||+|++++|||||++|+++||+.||+++ ++.|.|..+.+ .+++...+.+++.+++++++
T Consensus 354 ~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i--~~~g~~~v~~~----~~~~~~~~~~~~~~il~~~~--- 424 (496)
T KOG1192|consen 354 AVGGFVTHGGWNSTLESIYSGVPMVCVPLFGDQPLNARLL--VRHGGGGVLDK----RDLVSEELLEAIKEILENEE--- 424 (496)
T ss_pred cCcEEEECCcccHHHHHHhcCCceecCCccccchhHHHHH--HhCCCEEEEeh----hhcCcHHHHHHHHHHHcChH---
Confidence 9999999999999999999999999999999999999999 77777777776 56777779999999999999
Q ss_pred HHHHHHHHHHHHH
Q 046326 442 MRRRVQELKESAS 454 (476)
Q Consensus 442 ~~~~a~~l~~~~~ 454 (476)
|+++++++++..+
T Consensus 425 y~~~~~~l~~~~~ 437 (496)
T KOG1192|consen 425 YKEAAKRLSEILR 437 (496)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999876
No 27
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-39 Score=318.96 Aligned_cols=385 Identities=21% Similarity=0.273 Sum_probs=241.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCC-chH
Q 046326 7 QPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDM-PVV 85 (476)
Q Consensus 7 ~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 85 (476)
+|||+++..|+.||++|.++||++|.++| |+|+|++... +.+.++.. ++.|..++..........+. ...
T Consensus 1 ~mkil~~~~~~~Ghv~p~~aL~~eL~~~g-heV~~~~~~~------~~~~ve~a--g~~f~~~~~~~~~~~~~~~~~~~~ 71 (406)
T COG1819 1 RMKILFVVCGAYGHVNPCLALGKELRRRG-HEVVFASTGK------FKEFVEAA--GLAFVAYPIRDSELATEDGKFAGV 71 (406)
T ss_pred CceEEEEeccccccccchHHHHHHHHhcC-CeEEEEeCHH------HHHHHHHh--CcceeeccccCChhhhhhhhhhcc
Confidence 58999999999999999999999999999 9999999875 55555555 67777776531111101010 011
Q ss_pred HHH---HHHHHHhhcHHHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEecccHHHHHHHh-hcccccccccCCC
Q 046326 86 TRL---HAIVEESLSKSLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFVTTSVHFFAFIT-YLPTLDHEVQGEF 161 (476)
Q Consensus 86 ~~~---~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~-~~p~~~~~~~~~~ 161 (476)
..+ ......... .+.+.+.+. .+|+++.|...... .+++..++|++.............. +.+.
T Consensus 72 ~~~~~~~~~~~~~~~-~~~~~~~e~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 139 (406)
T COG1819 72 KSFRRLLQQFKKLIR-ELLELLREL-EPDLVVDDARLSLG-LAARLLGIPVVGINVAPYTPLPAAGLPLPP--------- 139 (406)
T ss_pred chhHHHhhhhhhhhH-HHHHHHHhc-chhhhhcchhhhhh-hhhhhcccchhhhhhhhccCCcccccCccc---------
Confidence 111 111112222 344455566 99999988754444 7888999998876554333111110 0000
Q ss_pred CCCCCCccCCCCCCCCccccCcccccCChhHHHHHHHHhhccCCCcE--EEEcCccccc---hhHHHHhhhcc-cCCCCC
Q 046326 162 VDLPEPIKIPGCPPVRPEDLLDQVRNRKIDEYKFFLLHVSRLPLAAG--IFLNSWENLE---FVPLKAIGEHS-FYLQIP 235 (476)
Q Consensus 162 ~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~~le---~~~~~~~~~~~-~~~~~~ 235 (476)
...-+..+.+...++........ ...........+...+ ...+.+..+. +.....+.+.. .|+. .
T Consensus 140 ------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 210 (406)
T COG1819 140 ------VGIAGKLPIPLYPLPPRLVRPLI--FARSWLPKLVVRRNLGLELGLPNIRRLFASGPLLEIAYTDVLFPPGD-R 210 (406)
T ss_pred ------ccccccccccccccChhhccccc--cchhhhhhhhhhhhccccccccchHHHhcCCCCccccccccccCCCC-C
Confidence 00001111111111111111000 0000001111111111 0000000000 00000001110 1100 1
Q ss_pred CC-CeEeecCCCCCCCCCCCChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEEecCCCCCcc
Q 046326 236 TP-PINPIGPLIKQDEPLSASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQRFIWVVRMPSDASAS 314 (476)
Q Consensus 236 ~p-~~~~vGpl~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~ 314 (476)
+| ...++||+...+. .++..|.... +++||+|+||.... .+.+..++++++.++.+||..++. .+
T Consensus 211 ~p~~~~~~~~~~~~~~------~~~~~~~~~d--~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~-~~---- 276 (406)
T COG1819 211 LPFIGPYIGPLLGEAA------NELPYWIPAD--RPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGG-AR---- 276 (406)
T ss_pred CCCCcCcccccccccc------ccCcchhcCC--CCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEeccc-cc----
Confidence 13 2556777665432 2333443333 44999999999866 888888999999999999999866 22
Q ss_pred ccccccCCCCCCCCCCCChhHHHhhhcCCCCeEeccccchHHhhccCCccceecccCchHHHHHHhcCCcEeeccccchh
Q 046326 315 ATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQVHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLYAEQ 394 (476)
Q Consensus 315 ~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ 394 (476)
.....+| .|+.+.+|+||..+|+++++ ||||||+|||+|||++|||+|++|...||
T Consensus 277 -----------~~~~~~p-----------~n~~v~~~~p~~~~l~~ad~--vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ 332 (406)
T COG1819 277 -----------DTLVNVP-----------DNVIVADYVPQLELLPRADA--VIHHGGAGTTSEALYAGVPLVVIPDGADQ 332 (406)
T ss_pred -----------cccccCC-----------CceEEecCCCHHHHhhhcCE--EEecCCcchHHHHHHcCCCEEEecCCcch
Confidence 1123355 89999999999999999996 99999999999999999999999999999
Q ss_pred hhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHH
Q 046326 395 RMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGGSSSDSLASFIKK 473 (476)
Q Consensus 395 ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 473 (476)
+.||.++ +++|+|+.+.. ..++++.|+++|+++|++++ |+++++++++.+++. +| .+.+.++|++
T Consensus 333 ~~nA~rv--e~~G~G~~l~~----~~l~~~~l~~av~~vL~~~~---~~~~~~~~~~~~~~~---~g--~~~~a~~le~ 397 (406)
T COG1819 333 PLNAERV--EELGAGIALPF----EELTEERLRAAVNEVLADDS---YRRAAERLAEEFKEE---DG--PAKAADLLEE 397 (406)
T ss_pred hHHHHHH--HHcCCceecCc----ccCCHHHHHHHHHHHhcCHH---HHHHHHHHHHHhhhc---cc--HHHHHHHHHH
Confidence 9999999 99999999998 78999999999999999999 999999999999865 44 4555555554
No 28
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.96 E-value=8.8e-27 Score=227.89 Aligned_cols=322 Identities=15% Similarity=0.154 Sum_probs=203.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHH
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTR 87 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (476)
.+|++...|+.||++|.++||++|.++| |+|.|++......... +... ++.+..++...... ...+ ..
T Consensus 2 ~~i~~~~GGTGGHi~Pala~a~~l~~~g-~~v~~vg~~~~~e~~l----~~~~--g~~~~~~~~~~l~~----~~~~-~~ 69 (352)
T PRK12446 2 KKIVFTGGGSAGHVTPNLAIIPYLKEDN-WDISYIGSHQGIEKTI----IEKE--NIPYYSISSGKLRR----YFDL-KN 69 (352)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHHHHhCC-CEEEEEECCCcccccc----Cccc--CCcEEEEeccCcCC----CchH-HH
Confidence 3699999999999999999999999999 9999998664332222 2222 68888776422211 1111 11
Q ss_pred HHHHH--HHhhcHHHHHHHHhcCCCCEEEECC--CcchHHHHHHHcCCCeEEEecccHHHHHHHhhcccccccccCCCCC
Q 046326 88 LHAIV--EESLSKSLKSVLTELCNPNALVIDL--FCTQAFEICSQLSIPTYSFVTTSVHFFAFITYLPTLDHEVQGEFVD 163 (476)
Q Consensus 88 ~~~~~--~~~~~~~l~~~l~~~~~pDlVI~D~--~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 163 (476)
+.... -...- ....+++++ +||+||... ....+..+|..+++|+++....
T Consensus 70 ~~~~~~~~~~~~-~~~~i~~~~-kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n------------------------ 123 (352)
T PRK12446 70 IKDPFLVMKGVM-DAYVRIRKL-KPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESD------------------------ 123 (352)
T ss_pred HHHHHHHHHHHH-HHHHHHHhc-CCCEEEecCchhhHHHHHHHHHcCCCEEEECCC------------------------
Confidence 11111 12222 455667888 999999743 3344567999999999885432
Q ss_pred CCCCccCCCCCCCCccccCcccccCChhHHHHHHHHhhccCCCcEEEEcCccccchhHHHHhhhcccCCCCCCCCeEeec
Q 046326 164 LPEPIKIPGCPPVRPEDLLDQVRNRKIDEYKFFLLHVSRLPLAAGIFLNSWENLEFVPLKAIGEHSFYLQIPTPPINPIG 243 (476)
Q Consensus 164 ~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~p~~~~vG 243 (476)
..|++. +++. .+....+..+|++... . ++. .+++++|
T Consensus 124 -----~~~g~~-------------------nr~~------~~~a~~v~~~f~~~~~----~-----~~~----~k~~~tG 160 (352)
T PRK12446 124 -----MTPGLA-------------------NKIA------LRFASKIFVTFEEAAK----H-----LPK----EKVIYTG 160 (352)
T ss_pred -----CCccHH-------------------HHHH------HHhhCEEEEEccchhh----h-----CCC----CCeEEEC
Confidence 122221 1110 0011122333332110 0 111 3588999
Q ss_pred CCCCCCCCCCCChhhHhhhccCCCCCcEEEEecCCCCCCCH-HHHHHHHHHHHhCCCceEEEEecCCCCCccccccccCC
Q 046326 244 PLIKQDEPLSASDEECLAWLDKQPPDSVLFAVPGSGGTLTA-EQVTEMAWGLEQSKQRFIWVVRMPSDASASATFFNVGS 322 (476)
Q Consensus 244 pl~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~-~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 322 (476)
+..++.-.. .......+-+.-.+++++|+|..||++.... +.+.+++..+. .+..++|.+|....
T Consensus 161 ~Pvr~~~~~-~~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~-~~~~vv~~~G~~~~------------ 226 (352)
T PRK12446 161 SPVREEVLK-GNREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELL-LKYQIVHLCGKGNL------------ 226 (352)
T ss_pred CcCCccccc-ccchHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhc-cCcEEEEEeCCchH------------
Confidence 766553211 1112222223333345699999999986554 33444554443 24788998875411
Q ss_pred CCCCCCCCCChhHHHhhhcCCCCeEecccc-chH-HhhccCCccceecccCchHHHHHHhcCCcEeecccc-----chhh
Q 046326 323 DVNDPKAYLPEGFLQRTRAQGAGMVVPSWA-PQV-HILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLY-----AEQR 395 (476)
Q Consensus 323 ~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~-pq~-~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~-----~DQ~ 395 (476)
+..... . .++.+.+|+ ++. .++.++++ +|||||.+|++|++++|+|+|++|+. +||.
T Consensus 227 ----------~~~~~~--~--~~~~~~~f~~~~m~~~~~~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~ 290 (352)
T PRK12446 227 ----------DDSLQN--K--EGYRQFEYVHGELPDILAITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQI 290 (352)
T ss_pred ----------HHHHhh--c--CCcEEecchhhhHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHH
Confidence 110111 1 344555787 544 68999996 99999999999999999999999984 5899
Q ss_pred hhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCChhHHHHHHHHH
Q 046326 396 MNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGEEGKVMRRRVQE 448 (476)
Q Consensus 396 ~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~ 448 (476)
.||..+ ++.|+|..+.. .+++++.|.+++.++++|++ .|++++++
T Consensus 291 ~Na~~l--~~~g~~~~l~~----~~~~~~~l~~~l~~ll~~~~--~~~~~~~~ 335 (352)
T PRK12446 291 LNAESF--ERQGYASVLYE----EDVTVNSLIKHVEELSHNNE--KYKTALKK 335 (352)
T ss_pred HHHHHH--HHCCCEEEcch----hcCCHHHHHHHHHHHHcCHH--HHHHHHHH
Confidence 999999 99999999987 78999999999999998754 25544433
No 29
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.93 E-value=5.1e-24 Score=205.91 Aligned_cols=327 Identities=17% Similarity=0.176 Sum_probs=207.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCc-EEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHH
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNHGV-HVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVT 86 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG~h-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (476)
++|++...++-||+.|.++|+++|.++| + +|.+.............. . ++.++.++....... .....+..
T Consensus 1 ~~ivl~~gGTGGHv~pAlAl~~~l~~~g-~~~v~~~~~~~~~e~~l~~~----~--~~~~~~I~~~~~~~~-~~~~~~~~ 72 (357)
T COG0707 1 KKIVLTAGGTGGHVFPALALAEELAKRG-WEQVIVLGTGDGLEAFLVKQ----Y--GIEFELIPSGGLRRK-GSLKLLKA 72 (357)
T ss_pred CeEEEEeCCCccchhHHHHHHHHHHhhC-ccEEEEecccccceeeeccc----c--CceEEEEeccccccc-CcHHHHHH
Confidence 4688999999999999999999999999 8 466664443122111111 1 677777775433322 11111111
Q ss_pred HHHHHHHHhhcHHHHHHHHhcCCCCEEEE--CCCcchHHHHHHHcCCCeEEEecccHHHHHHHhhcccccccccCCCCCC
Q 046326 87 RLHAIVEESLSKSLKSVLTELCNPNALVI--DLFCTQAFEICSQLSIPTYSFVTTSVHFFAFITYLPTLDHEVQGEFVDL 164 (476)
Q Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~~pDlVI~--D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 164 (476)
. ........ ..+.++++. +||+||. .+.+..+..+|..+|||.++.-.
T Consensus 73 -~-~~~~~~~~-~a~~il~~~-kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEq-------------------------- 122 (357)
T COG0707 73 -P-FKLLKGVL-QARKILKKL-KPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQ-------------------------- 122 (357)
T ss_pred -H-HHHHHHHH-HHHHHHHHc-CCCEEEecCCccccHHHHHHHhCCCCEEEEec--------------------------
Confidence 1 11223334 678889999 9999996 45555666789999999998433
Q ss_pred CCCccCCCCCCCCccccCcccccCChhHHHHHHHHhhccCCCcEEEEcCccccchhHHHHhhhcccCCCCCCCCeEeecC
Q 046326 165 PEPIKIPGCPPVRPEDLLDQVRNRKIDEYKFFLLHVSRLPLAAGIFLNSWENLEFVPLKAIGEHSFYLQIPTPPINPIGP 244 (476)
Q Consensus 165 ~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~p~~~~vGp 244 (476)
...||..+. ...+....+..+|.+.+. +.. -.+++.+|-
T Consensus 123 ---n~~~G~ank-------------------------~~~~~a~~V~~~f~~~~~----------~~~---~~~~~~tG~ 161 (357)
T COG0707 123 ---NAVPGLANK-------------------------ILSKFAKKVASAFPKLEA----------GVK---PENVVVTGI 161 (357)
T ss_pred ---CCCcchhHH-------------------------HhHHhhceeeeccccccc----------cCC---CCceEEecC
Confidence 333443211 000111112333332111 000 024888884
Q ss_pred CCCCCCCCCCChhhHhhhccCCCCCcEEEEecCCCCCCCH-HHHHHHHHHHHhCCCceEEEEecCCCCCccccccccCCC
Q 046326 245 LIKQDEPLSASDEECLAWLDKQPPDSVLFAVPGSGGTLTA-EQVTEMAWGLEQSKQRFIWVVRMPSDASASATFFNVGSD 323 (476)
Q Consensus 245 l~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~-~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 323 (476)
..+++-. ..+..-....... ++++|+|..||++...- +.+.++...+.+ +..+++.+|....
T Consensus 162 Pvr~~~~--~~~~~~~~~~~~~-~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~~------------- 224 (357)
T COG0707 162 PVRPEFE--ELPAAEVRKDGRL-DKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKNDL------------- 224 (357)
T ss_pred cccHHhh--ccchhhhhhhccC-CCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcchH-------------
Confidence 3333211 1111111121111 45599999999975443 334445544444 5677777765411
Q ss_pred CCCCCCCCChhHHHhhhcCCCC-eEeccccchH-HhhccCCccceecccCchHHHHHHhcCCcEeecccc----chhhhh
Q 046326 324 VNDPKAYLPEGFLQRTRAQGAG-MVVPSWAPQV-HILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLY----AEQRMN 397 (476)
Q Consensus 324 ~~~~~~~lp~~~~~~~~~~~~~-~~~~~~~pq~-~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~----~DQ~~n 397 (476)
+.....+.. .+ +.+.+|.+++ .++..+++ +||++|++|+.|++++|+|+|.+|+- .||..|
T Consensus 225 ---------~~~~~~~~~--~~~~~v~~f~~dm~~~~~~ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~N 291 (357)
T COG0707 225 ---------EELKSAYNE--LGVVRVLPFIDDMAALLAAADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYN 291 (357)
T ss_pred ---------HHHHHHHhh--cCcEEEeeHHhhHHHHHHhccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHH
Confidence 334444443 34 8888899886 48888886 99999999999999999999999983 489999
Q ss_pred hhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHH
Q 046326 398 AAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGEE-GKVMRRRVQEL 449 (476)
Q Consensus 398 a~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l 449 (476)
|+.+ ++.|.|..+.. .++|.+++.+.|.+++.+++ .+.|+++++.+
T Consensus 292 A~~l--~~~gaa~~i~~----~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~ 338 (357)
T COG0707 292 AKFL--EKAGAALVIRQ----SELTPEKLAELILRLLSNPEKLKAMAENAKKL 338 (357)
T ss_pred HHHH--HhCCCEEEecc----ccCCHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 9999 99999999998 78999999999999999855 44455555544
No 30
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.90 E-value=1.4e-21 Score=190.09 Aligned_cols=305 Identities=17% Similarity=0.232 Sum_probs=184.6
Q ss_pred CEEEEEcCC-CccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHH
Q 046326 8 PHVAVLPSP-GLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVT 86 (476)
Q Consensus 8 ~rIll~~~p-~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (476)
|||++...+ +.||+...++|+++| || |+|+|++... ....+.. .+....++....... ....+...
T Consensus 1 MkIl~~v~~~G~GH~~R~~~la~~L--rg-~~v~~~~~~~--~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~ 67 (318)
T PF13528_consen 1 MKILFYVQGHGLGHASRCLALARAL--RG-HEVTFITSGP--APEFLKP-------RFPVREIPGLGPIQE-NGRLDRWK 67 (318)
T ss_pred CEEEEEeCCCCcCHHHHHHHHHHHH--cc-CceEEEEcCC--cHHHhcc-------ccCEEEccCceEecc-CCccchHH
Confidence 689888887 889999999999999 68 9999999774 1122211 123333332111111 11111111
Q ss_pred HHHH------HHHHhhcHHHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEecccHHHHHHHhhcccccccccCC
Q 046326 87 RLHA------IVEESLSKSLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFVTTSVHFFAFITYLPTLDHEVQGE 160 (476)
Q Consensus 87 ~~~~------~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 160 (476)
.... ....... .+.+++++. +||+||+|. .+.+..+|+..|||++.+.......
T Consensus 68 ~~~~~~~~~~~~~~~~~-~~~~~l~~~-~pDlVIsD~-~~~~~~aa~~~giP~i~i~~~~~~~----------------- 127 (318)
T PF13528_consen 68 TVRNNIRWLARLARRIR-REIRWLREF-RPDLVISDF-YPLAALAARRAGIPVIVISNQYWFL----------------- 127 (318)
T ss_pred HHHHHHHhhHHHHHHHH-HHHHHHHhc-CCCEEEEcC-hHHHHHHHHhcCCCEEEEEehHHcc-----------------
Confidence 1111 1122333 455666666 999999996 4556678999999999877654321
Q ss_pred CCCCCCCccCCCCCCCCccccCcccccCChhHHHHHHHHhhccCCCcEEEEcCccccchhHHHHhhhcccCCCCCCCCeE
Q 046326 161 FVDLPEPIKIPGCPPVRPEDLLDQVRNRKIDEYKFFLLHVSRLPLAAGIFLNSWENLEFVPLKAIGEHSFYLQIPTPPIN 240 (476)
Q Consensus 161 ~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~p~~~ 240 (476)
.+... .... +........+.... ........+..++. .. .+...++.
T Consensus 128 ---------~~~~~-~~~~-------~~~~~~~~~~~~~~-~~~~~~~~l~~~~~-~~--------------~~~~~~~~ 174 (318)
T PF13528_consen 128 ---------HPNFW-LPWD-------QDFGRLIERYIDRY-HFPPADRRLALSFY-PP--------------LPPFFRVP 174 (318)
T ss_pred ---------cccCC-cchh-------hhHHHHHHHhhhhc-cCCcccceecCCcc-cc--------------cccccccc
Confidence 00000 0000 00000011111000 11222222222222 10 00012356
Q ss_pred eecCCCCCCCCCCCChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHhCC-CceEEEEecCCCCCccccccc
Q 046326 241 PIGPLIKQDEPLSASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQSK-QRFIWVVRMPSDASASATFFN 319 (476)
Q Consensus 241 ~vGpl~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~~~~~~~ 319 (476)
++||+..+.... .+ . .+++.|+|+||..... .++++++..+ ..|++. +....
T Consensus 175 ~~~p~~~~~~~~--~~-------~--~~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~~--------- 227 (318)
T PF13528_consen 175 FVGPIIRPEIRE--LP-------P--EDEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNAA--------- 227 (318)
T ss_pred ccCchhcccccc--cC-------C--CCCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCcc---------
Confidence 788877654221 11 1 1234799999888532 5566676666 566655 44311
Q ss_pred cCCCCCCCCCCCChhHHHhhhcCCCCeEecccc-ch-HHhhccCCccceecccCchHHHHHHhcCCcEeeccc--cchhh
Q 046326 320 VGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWA-PQ-VHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPL--YAEQR 395 (476)
Q Consensus 320 ~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~-pq-~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~--~~DQ~ 395 (476)
. + .. +|+.+..+. +. ..++..+++ +|||||+||++|++++|+|+|++|. ..||.
T Consensus 228 ---------~--~-------~~--~ni~~~~~~~~~~~~~m~~ad~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~ 285 (318)
T PF13528_consen 228 ---------D--P-------RP--GNIHVRPFSTPDFAELMAAADL--VISKGGYTTISEALALGKPALVIPRPGQDEQE 285 (318)
T ss_pred ---------c--c-------cC--CCEEEeecChHHHHHHHHhCCE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHH
Confidence 0 0 12 789988876 33 468999995 9999999999999999999999999 78999
Q ss_pred hhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHH
Q 046326 396 MNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLV 433 (476)
Q Consensus 396 ~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~ 433 (476)
.||+++ ++.|+|+.+.. .+++++.|+++|+++
T Consensus 286 ~~a~~l--~~~G~~~~~~~----~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 286 YNARKL--EELGLGIVLSQ----EDLTPERLAEFLERL 317 (318)
T ss_pred HHHHHH--HHCCCeEEccc----ccCCHHHHHHHHhcC
Confidence 999999 99999999987 789999999999764
No 31
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.88 E-value=1.4e-20 Score=182.98 Aligned_cols=84 Identities=19% Similarity=0.318 Sum_probs=71.9
Q ss_pred CCeEeccccc-h-HHhhccCCccceecccCchHHHHHHhcCCcEeeccccc--hhhhhhhhhcceeeeeEEeccccCCCC
Q 046326 344 AGMVVPSWAP-Q-VHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLYA--EQRMNAAMLTAEETGVAVKPETEPGKK 419 (476)
Q Consensus 344 ~~~~~~~~~p-q-~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~--DQ~~na~~~~~~~~G~G~~l~~~~~~~ 419 (476)
+|+.+.+|.| + ...|+.+++ +|||||++|++|++++|+|+|++|..+ ||..||+.+ ++.|+|+.+.. .
T Consensus 229 ~~v~~~~~~~~~~~~~l~~ad~--vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l--~~~g~~~~l~~----~ 300 (321)
T TIGR00661 229 ENVEIRRITTDNFKELIKNAEL--VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKL--EDLGCGIALEY----K 300 (321)
T ss_pred CCEEEEECChHHHHHHHHhCCE--EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHH--HHCCCEEEcCh----h
Confidence 7888889997 3 457788885 999999999999999999999999955 899999999 99999999887 4
Q ss_pred CcCHHHHHHHHHHHhcCCh
Q 046326 420 VIGREEIERVVRLVMEGEE 438 (476)
Q Consensus 420 ~~~~~~l~~ai~~~l~~~~ 438 (476)
++ ++.+++.++++|++
T Consensus 301 ~~---~~~~~~~~~~~~~~ 316 (321)
T TIGR00661 301 EL---RLLEAILDIRNMKR 316 (321)
T ss_pred hH---HHHHHHHhcccccc
Confidence 54 66667777777776
No 32
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.83 E-value=5.9e-18 Score=167.42 Aligned_cols=346 Identities=16% Similarity=0.172 Sum_probs=203.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHH
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTR 87 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (476)
|||+|+..+..||...++.|+++|.++| |+|++++....... ...... +++++.++....... . .......
T Consensus 2 ~~i~i~~~g~gG~~~~~~~la~~L~~~g-~ev~vv~~~~~~~~----~~~~~~--g~~~~~~~~~~~~~~-~-~~~~l~~ 72 (357)
T PRK00726 2 KKILLAGGGTGGHVFPALALAEELKKRG-WEVLYLGTARGMEA----RLVPKA--GIEFHFIPSGGLRRK-G-SLANLKA 72 (357)
T ss_pred cEEEEEcCcchHhhhHHHHHHHHHHhCC-CEEEEEECCCchhh----hccccC--CCcEEEEeccCcCCC-C-hHHHHHH
Confidence 7899999999999999999999999999 99999987531101 111111 677777764321111 0 0011111
Q ss_pred HHHHHHHhhcHHHHHHHHhcCCCCEEEECCC--cchHHHHHHHcCCCeEEEecccHHHHHHHhhcccccccccCCCCCCC
Q 046326 88 LHAIVEESLSKSLKSVLTELCNPNALVIDLF--CTQAFEICSQLSIPTYSFVTTSVHFFAFITYLPTLDHEVQGEFVDLP 165 (476)
Q Consensus 88 ~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~--~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 165 (476)
.... ..... .+++++++. +||+|++... ...+..++...++|.+.... ..
T Consensus 73 ~~~~-~~~~~-~~~~~ik~~-~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~-~~------------------------ 124 (357)
T PRK00726 73 PFKL-LKGVL-QARKILKRF-KPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQ-NA------------------------ 124 (357)
T ss_pred HHHH-HHHHH-HHHHHHHhc-CCCEEEECCCcchhHHHHHHHHcCCCEEEEcC-CC------------------------
Confidence 1111 22333 567778877 9999998742 23344567888999885321 00
Q ss_pred CCccCCCCCCCCccccCcccccCChhHHHHHHHHhhccCCCcEEEEcCccccchhHHHHhhhcccCCCCCCCCeEeecCC
Q 046326 166 EPIKIPGCPPVRPEDLLDQVRNRKIDEYKFFLLHVSRLPLAAGIFLNSWENLEFVPLKAIGEHSFYLQIPTPPINPIGPL 245 (476)
Q Consensus 166 ~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~p~~~~vGpl 245 (476)
.++. .+++.. +..+.++. ..++. . .. .+ ..+++++|+.
T Consensus 125 ----~~~~-------------------~~r~~~-----~~~d~ii~-~~~~~---~---~~---~~----~~~i~vi~n~ 162 (357)
T PRK00726 125 ----VPGL-------------------ANKLLA-----RFAKKVAT-AFPGA---F---PE---FF----KPKAVVTGNP 162 (357)
T ss_pred ----CccH-------------------HHHHHH-----HHhchheE-Cchhh---h---hc---cC----CCCEEEECCC
Confidence 0000 011100 11122222 11110 0 00 01 1468888865
Q ss_pred CCCCCCCCCChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHH-HHHHHHhCCC--ceEEEEecCCCCCccccccccCC
Q 046326 246 IKQDEPLSASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTE-MAWGLEQSKQ--RFIWVVRMPSDASASATFFNVGS 322 (476)
Q Consensus 246 ~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~-~~~al~~~~~--~~i~~~~~~~~~~~~~~~~~~~~ 322 (476)
....... . +. ...-+...++..+|++..|+... ..... +.+++.+... .++|.+|.+..
T Consensus 163 v~~~~~~-~-~~-~~~~~~~~~~~~~i~~~gg~~~~---~~~~~~l~~a~~~~~~~~~~~~~~G~g~~------------ 224 (357)
T PRK00726 163 VREEILA-L-AA-PPARLAGREGKPTLLVVGGSQGA---RVLNEAVPEALALLPEALQVIHQTGKGDL------------ 224 (357)
T ss_pred CChHhhc-c-cc-hhhhccCCCCCeEEEEECCcHhH---HHHHHHHHHHHHHhhhCcEEEEEcCCCcH------------
Confidence 5432110 0 00 01111212233467776666532 22222 2355544332 44555554311
Q ss_pred CCCCCCCCCChhHHHhhhcCCCCeEeccccch-HHhhccCCccceecccCchHHHHHHhcCCcEeeccc----cchhhhh
Q 046326 323 DVNDPKAYLPEGFLQRTRAQGAGMVVPSWAPQ-VHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPL----YAEQRMN 397 (476)
Q Consensus 323 ~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~pq-~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~----~~DQ~~n 397 (476)
+.+.+... .+-++.+.+|+.+ ..+++.+++ +|+|+|.+++.||+++|+|+|++|. .+||..|
T Consensus 225 ----------~~~~~~~~-~~~~v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~ 291 (357)
T PRK00726 225 ----------EEVRAAYA-AGINAEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTAN 291 (357)
T ss_pred ----------HHHHHHhh-cCCcEEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHH
Confidence 22222221 1134788899854 579999996 9999999999999999999999997 4689999
Q ss_pred hhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHhhC
Q 046326 398 AAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGGSSSDSLASFIKKCKH 476 (476)
Q Consensus 398 a~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 476 (476)
+..+ .+.|.|..+.. ++++++.|.++|.++++|++ ++++..+-+.+. .+.++..+.++.+++.+.|
T Consensus 292 ~~~i--~~~~~g~~~~~----~~~~~~~l~~~i~~ll~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 357 (357)
T PRK00726 292 ARAL--VDAGAALLIPQ----SDLTPEKLAEKLLELLSDPE---RLEAMAEAARAL----GKPDAAERLADLIEELARK 357 (357)
T ss_pred HHHH--HHCCCEEEEEc----ccCCHHHHHHHHHHHHcCHH---HHHHHHHHHHhc----CCcCHHHHHHHHHHHHhhC
Confidence 9999 89999999987 67889999999999999887 554443333322 3466777777777776654
No 33
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.78 E-value=1.4e-16 Score=157.24 Aligned_cols=316 Identities=20% Similarity=0.206 Sum_probs=187.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHH
Q 046326 9 HVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRL 88 (476)
Q Consensus 9 rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (476)
||++...++.||+...+.|++.|.++| |+|++++....... ..... .+++++.++....... .....+
T Consensus 1 ~~~~~~~~~gG~~~~~~~la~~l~~~G-~ev~v~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~-----~~~~~~ 68 (350)
T cd03785 1 RILIAGGGTGGHIFPALALAEELRERG-AEVLFLGTKRGLEA----RLVPK--AGIPLHTIPVGGLRRK-----GSLKKL 68 (350)
T ss_pred CEEEEecCchhhhhHHHHHHHHHHhCC-CEEEEEECCCcchh----hcccc--cCCceEEEEecCcCCC-----ChHHHH
Confidence 689999999999999999999999999 99999987641111 11111 1567777664321111 111111
Q ss_pred HHHH--HHhhcHHHHHHHHhcCCCCEEEECCC--cchHHHHHHHcCCCeEEEecccHHHHHHHhhcccccccccCCCCCC
Q 046326 89 HAIV--EESLSKSLKSVLTELCNPNALVIDLF--CTQAFEICSQLSIPTYSFVTTSVHFFAFITYLPTLDHEVQGEFVDL 164 (476)
Q Consensus 89 ~~~~--~~~~~~~l~~~l~~~~~pDlVI~D~~--~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 164 (476)
.... ..... .+..++++. +||+|+++.. ...+..+|...|+|++.... .
T Consensus 69 ~~~~~~~~~~~-~~~~~i~~~-~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~-~------------------------ 121 (350)
T cd03785 69 KAPFKLLKGVL-QARKILKKF-KPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQ-N------------------------ 121 (350)
T ss_pred HHHHHHHHHHH-HHHHHHHhc-CCCEEEECCCCcchHHHHHHHHhCCCEEEEcC-C------------------------
Confidence 1111 12223 567777877 9999997542 33345578889999885311 0
Q ss_pred CCCccCCCCCCCCccccCcccccCChhHHHHHHHHhhccCCCcEEEEcCccccchhHHHHhhhcccCCCCCCCCeEeecC
Q 046326 165 PEPIKIPGCPPVRPEDLLDQVRNRKIDEYKFFLLHVSRLPLAAGIFLNSWENLEFVPLKAIGEHSFYLQIPTPPINPIGP 244 (476)
Q Consensus 165 ~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~p~~~~vGp 244 (476)
..++. .+++ ..+..+.++..+-...+. +++ .++.++|+
T Consensus 122 ----~~~~~-------------------~~~~-----~~~~~~~vi~~s~~~~~~----------~~~----~~~~~i~n 159 (350)
T cd03785 122 ----AVPGL-------------------ANRL-----LARFADRVALSFPETAKY----------FPK----DKAVVTGN 159 (350)
T ss_pred ----CCccH-------------------HHHH-----HHHhhCEEEEcchhhhhc----------CCC----CcEEEECC
Confidence 00100 0111 011234444332111110 011 35777886
Q ss_pred CCCCCCCCCCChhhHhhhccCCCCCcEEEEecCCCCCCCH-HHHHHHHHHHHhCCCceEEEEecCCCCCccccccccCCC
Q 046326 245 LIKQDEPLSASDEECLAWLDKQPPDSVLFAVPGSGGTLTA-EQVTEMAWGLEQSKQRFIWVVRMPSDASASATFFNVGSD 323 (476)
Q Consensus 245 l~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~-~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 323 (476)
....... ..... .+.+...+++.+|++..|+...... +.+.+++..+.+.+..+++.+|.+..
T Consensus 160 ~v~~~~~--~~~~~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~~------------- 223 (350)
T cd03785 160 PVREEIL--ALDRE-RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGDL------------- 223 (350)
T ss_pred CCchHHh--hhhhh-HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCccH-------------
Confidence 5432211 00111 2222222334467676676643221 22334444444334555666654311
Q ss_pred CCCCCCCCChhHHHhhhcCCCCeEecccc-chHHhhccCCccceecccCchHHHHHHhcCCcEeeccc----cchhhhhh
Q 046326 324 VNDPKAYLPEGFLQRTRAQGAGMVVPSWA-PQVHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPL----YAEQRMNA 398 (476)
Q Consensus 324 ~~~~~~~lp~~~~~~~~~~~~~~~~~~~~-pq~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~----~~DQ~~na 398 (476)
+.+.+.....++++.+.+|+ +...+|..+++ +|+++|.+|+.||+++|+|+|++|. ..+|..|+
T Consensus 224 ---------~~l~~~~~~~~~~v~~~g~~~~~~~~l~~ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~ 292 (350)
T cd03785 224 ---------EEVKKAYEELGVNYEVFPFIDDMAAAYAAADL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANA 292 (350)
T ss_pred ---------HHHHHHHhccCCCeEEeehhhhHHHHHHhcCE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhH
Confidence 22322222111689988998 34568999996 9999999999999999999999986 46789999
Q ss_pred hhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCCh
Q 046326 399 AMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGEE 438 (476)
Q Consensus 399 ~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~ 438 (476)
..+ .+.|.|+.+.. ...+.+++.++|.+++++++
T Consensus 293 ~~l--~~~g~g~~v~~----~~~~~~~l~~~i~~ll~~~~ 326 (350)
T cd03785 293 RAL--VKAGAAVLIPQ----EELTPERLAAALLELLSDPE 326 (350)
T ss_pred HHH--HhCCCEEEEec----CCCCHHHHHHHHHHHhcCHH
Confidence 999 88899999877 45789999999999998776
No 34
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.75 E-value=8.7e-17 Score=159.69 Aligned_cols=351 Identities=13% Similarity=0.081 Sum_probs=194.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHH
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTR 87 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (476)
.+|+|...++.||++|. +|+++|+++| ++++|+....+ ...+. ..+..+++..++. .++ . +....
T Consensus 6 ~ki~i~aGgtsGhi~pa-al~~~l~~~~-~~~~~~g~gg~----~m~~~--g~~~~~~~~~l~v---~G~-~---~~l~~ 70 (385)
T TIGR00215 6 PTIALVAGEASGDILGA-GLRQQLKEHY-PNARFIGVAGP----RMAAE--GCEVLYSMEELSV---MGL-R---EVLGR 70 (385)
T ss_pred CeEEEEeCCccHHHHHH-HHHHHHHhcC-CCcEEEEEccH----HHHhC--cCccccChHHhhh---ccH-H---HHHHH
Confidence 57999999999999999 9999999998 99999986631 11111 0111233333321 111 1 11112
Q ss_pred HHHHHHHhhcHHHHHHHHhcCCCCEEE-ECCCcchHHH--HHHHcCCCeEEEecccHHHHHHHhhcccccccccCCCCCC
Q 046326 88 LHAIVEESLSKSLKSVLTELCNPNALV-IDLFCTQAFE--ICSQLSIPTYSFVTTSVHFFAFITYLPTLDHEVQGEFVDL 164 (476)
Q Consensus 88 ~~~~~~~~~~~~l~~~l~~~~~pDlVI-~D~~~~~~~~--~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 164 (476)
+... ..... ..+.++++. +||+|| .|+..+.... .|+.+|||++.+.+ |-.
T Consensus 71 ~~~~-~~~~~-~~~~~l~~~-kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~-P~~---------------------- 124 (385)
T TIGR00215 71 LGRL-LKIRK-EVVQLAKQA-KPDLLVGIDAPDFNLTKELKKKDPGIKIIYYIS-PQV---------------------- 124 (385)
T ss_pred HHHH-HHHHH-HHHHHHHhc-CCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeC-CcH----------------------
Confidence 2222 22333 567777777 999999 5764434333 78999999987542 110
Q ss_pred CCCccCCCCCCCCccccCcccccCChhHHHHHHHHhhccCCCcEEEEcCccccchhHHHHhhhcccCCCCCCCCeEeecC
Q 046326 165 PEPIKIPGCPPVRPEDLLDQVRNRKIDEYKFFLLHVSRLPLAAGIFLNSWENLEFVPLKAIGEHSFYLQIPTPPINPIGP 244 (476)
Q Consensus 165 ~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~p~~~~vGp 244 (476)
...++. + +..+..+ .+. +...++ .+.+.. ... + -+..+||.
T Consensus 125 ---waw~~~--------------~-~r~l~~~---------~d~-v~~~~~-~e~~~~---~~~---g----~~~~~vGn 165 (385)
T TIGR00215 125 ---WAWRKW--------------R-AKKIEKA---------TDF-LLAILP-FEKAFY---QKK---N----VPCRFVGH 165 (385)
T ss_pred ---hhcCcc--------------h-HHHHHHH---------HhH-hhccCC-CcHHHH---Hhc---C----CCEEEECC
Confidence 000000 0 0001111 111 111221 122111 110 1 24667884
Q ss_pred CCCCCCCCC-CChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHhC-----CCceEEEEecCCCCCcccccc
Q 046326 245 LIKQDEPLS-ASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQS-----KQRFIWVVRMPSDASASATFF 318 (476)
Q Consensus 245 l~~~~~~~~-~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~ 318 (476)
...+..... ....+..+-+.-.+++++|.+..||....-......++++++.. +.++++.......
T Consensus 166 Pv~~~~~~~~~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~-------- 237 (385)
T TIGR00215 166 PLLDAIPLYKPDRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFKR-------- 237 (385)
T ss_pred chhhhccccCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCchh--------
Confidence 433221100 11222222233333445888888998643223334444443332 3455554322110
Q ss_pred ccCCCCCCCCCCCChhHHHhhhcC--CCCeEeccccchHHhhccCCccceecccCchHHHHHHhcCCcEeec----cccc
Q 046326 319 NVGSDVNDPKAYLPEGFLQRTRAQ--GAGMVVPSWAPQVHILRHPSTGGFLSHCGWNSTLESICHGVPMIAW----PLYA 392 (476)
Q Consensus 319 ~~~~~~~~~~~~lp~~~~~~~~~~--~~~~~~~~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~----P~~~ 392 (476)
.+.+.+..... +..+....+ +...++..+++ +|+-+|..|+ |++++|+|+|++ |+..
T Consensus 238 -------------~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~ 300 (385)
T TIGR00215 238 -------------RLQFEQIKAEYGPDLQLHLIDG-DARKAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTF 300 (385)
T ss_pred -------------HHHHHHHHHHhCCCCcEEEECc-hHHHHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHH
Confidence 01121111100 023333222 33458888886 9999999988 999999999999 8732
Q ss_pred ---------hhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCC----hhHHHHHHHHHHHHHHHHHhcc
Q 046326 393 ---------EQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGE----EGKVMRRRVQELKESASRELGD 459 (476)
Q Consensus 393 ---------DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~----~~~~~~~~a~~l~~~~~~~~~~ 459 (476)
.|..|+..+ ...++...+.. .++|++.|.+.+.++++|+ + ++++.++--.++++-+.+
T Consensus 301 ~~~~~~~~~~~~~~~nil--~~~~~~pel~q----~~~~~~~l~~~~~~ll~~~~~~~~---~~~~~~~~~~~~~~~l~~ 371 (385)
T TIGR00215 301 LIARRLVKTDYISLPNIL--ANRLLVPELLQ----EECTPHPLAIALLLLLENGLKAYK---EMHRERQFFEELRQRIYC 371 (385)
T ss_pred HHHHHHHcCCeeeccHHh--cCCccchhhcC----CCCCHHHHHHHHHHHhcCCcccHH---HHHHHHHHHHHHHHHhcC
Confidence 277899999 88899888776 6899999999999999998 6 444444444444444566
Q ss_pred CCChHHHHHHHHH
Q 046326 460 GGSSSDSLASFIK 472 (476)
Q Consensus 460 ~g~~~~~~~~~~~ 472 (476)
+|.+.++.+.+++
T Consensus 372 ~~~~~~~a~~i~~ 384 (385)
T TIGR00215 372 NADSERAAQAVLE 384 (385)
T ss_pred CCHHHHHHHHHhh
Confidence 7788777766654
No 35
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.73 E-value=1.2e-15 Score=150.43 Aligned_cols=311 Identities=17% Similarity=0.198 Sum_probs=172.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHH
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTR 87 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (476)
|||+|++.+..||+...+.|+++|.++| |+|++++...... ....... +++++.++....... .....
T Consensus 1 ~~i~~~~g~~~g~~~~~~~La~~L~~~g-~eV~vv~~~~~~~----~~~~~~~--g~~~~~i~~~~~~~~-----~~~~~ 68 (348)
T TIGR01133 1 KKVVLAAGGTGGHIFPALAVAEELIKRG-VEVLWLGTKRGLE----KRLVPKA--GIEFYFIPVGGLRRK-----GSFRL 68 (348)
T ss_pred CeEEEEeCccHHHHhHHHHHHHHHHhCC-CEEEEEeCCCcch----hcccccC--CCceEEEeccCcCCC-----ChHHH
Confidence 4899999999999998889999999999 9999997643111 1111111 677777754221111 11111
Q ss_pred H---HHHHHHhhcHHHHHHHHhcCCCCEEEECCCc--chHHHHHHHcCCCeEEEecccHHHHHHHhhcccccccccCCCC
Q 046326 88 L---HAIVEESLSKSLKSVLTELCNPNALVIDLFC--TQAFEICSQLSIPTYSFVTTSVHFFAFITYLPTLDHEVQGEFV 162 (476)
Q Consensus 88 ~---~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~--~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 162 (476)
+ ... ..... .+++++++. +||+|++.... ..+..++...++|.+.+.. ..
T Consensus 69 l~~~~~~-~~~~~-~l~~~i~~~-~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~-~~--------------------- 123 (348)
T TIGR01133 69 IKTPLKL-LKAVF-QARRILKKF-KPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQ-NA--------------------- 123 (348)
T ss_pred HHHHHHH-HHHHH-HHHHHHHhc-CCCEEEEcCCcccHHHHHHHHHcCCCEEEECC-CC---------------------
Confidence 1 111 12333 577788888 99999986432 2334467888999874211 00
Q ss_pred CCCCCccCCCCCCCCccccCcccccCChhHHHHHHHHhhccCCCcEEEEcCccccchhHHHHhhhcccCCCCCCCCeEee
Q 046326 163 DLPEPIKIPGCPPVRPEDLLDQVRNRKIDEYKFFLLHVSRLPLAAGIFLNSWENLEFVPLKAIGEHSFYLQIPTPPINPI 242 (476)
Q Consensus 163 ~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~p~~~~v 242 (476)
.++. ..++. .+..+.++..+ ++... + -...++
T Consensus 124 -------~~~~-------------------~~~~~-----~~~~d~ii~~~-~~~~~----~------------~~~~~i 155 (348)
T TIGR01133 124 -------VPGL-------------------TNKLL-----SRFAKKVLISF-PGAKD----H------------FEAVLV 155 (348)
T ss_pred -------CccH-------------------HHHHH-----HHHhCeeEECc-hhHhh----c------------CCceEE
Confidence 0000 00111 11223333322 11110 0 012344
Q ss_pred cCCCCCCCCCCCChhhHhhhccCCCCCcEEEEecCCCCCCCH-HHHHHHHHHHHhCCCceEEEEecCCCCCccccccccC
Q 046326 243 GPLIKQDEPLSASDEECLAWLDKQPPDSVLFAVPGSGGTLTA-EQVTEMAWGLEQSKQRFIWVVRMPSDASASATFFNVG 321 (476)
Q Consensus 243 Gpl~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~-~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~ 321 (476)
|........ ..+.. .+.+...+++.+|.+..|+...... +.+...+..+...+..+++..+.. .
T Consensus 156 ~n~v~~~~~--~~~~~-~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~~~~~~~~~g~~-~----------- 220 (348)
T TIGR01133 156 GNPVRQEIR--SLPVP-RERFGLREGKPTILVLGGSQGAKILNELVPKALAKLAEKGIQIVHQTGKN-D----------- 220 (348)
T ss_pred cCCcCHHHh--cccch-hhhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhcCcEEEEECCcc-h-----------
Confidence 432211100 00000 1122222233355555566542111 112223333333345665544322 1
Q ss_pred CCCCCCCCCCChhHHHhhhcCCCCe-Eecccc--chHHhhccCCccceecccCchHHHHHHhcCCcEeecccc---chhh
Q 046326 322 SDVNDPKAYLPEGFLQRTRAQGAGM-VVPSWA--PQVHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLY---AEQR 395 (476)
Q Consensus 322 ~~~~~~~~~lp~~~~~~~~~~~~~~-~~~~~~--pq~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~---~DQ~ 395 (476)
. +.+.+.... .++ .++.|. +-..+|..+++ +|+++|.+++.||+++|+|+|++|.. .+|.
T Consensus 221 ---------~-~~l~~~~~~--~~l~~~v~~~~~~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~ 286 (348)
T TIGR01133 221 ---------L-EKVKNVYQE--LGIEAIVTFIDENMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQY 286 (348)
T ss_pred ---------H-HHHHHHHhh--CCceEEecCcccCHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchh
Confidence 0 223322222 121 122333 44578999996 99999988999999999999999873 5688
Q ss_pred hhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCCh
Q 046326 396 MNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGEE 438 (476)
Q Consensus 396 ~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~ 438 (476)
.|+..+ ++.|.|..+.. ++.+.++|.+++.++++|++
T Consensus 287 ~~~~~i--~~~~~G~~~~~----~~~~~~~l~~~i~~ll~~~~ 323 (348)
T TIGR01133 287 YNAKFL--EDLGAGLVIRQ----KELLPEKLLEALLKLLLDPA 323 (348)
T ss_pred hHHHHH--HHCCCEEEEec----ccCCHHHHHHHHHHHHcCHH
Confidence 899999 88899988876 56789999999999998876
No 36
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.71 E-value=1.6e-15 Score=151.32 Aligned_cols=164 Identities=18% Similarity=0.272 Sum_probs=108.3
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHHHHHHhC-CCceEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCCe
Q 046326 268 PDSVLFAVPGSGGTLTAEQVTEMAWGLEQS-KQRFIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGM 346 (476)
Q Consensus 268 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~ 346 (476)
++++|++..|+.... ..+..+++++.+. +.++++..|.+.. +-+.+.+.....++++
T Consensus 201 ~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~~~--------------------~~~~l~~~~~~~~~~v 258 (380)
T PRK13609 201 NKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKNEA--------------------LKQSLEDLQETNPDAL 258 (380)
T ss_pred CCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCCHH--------------------HHHHHHHHHhcCCCcE
Confidence 344788877887532 2345566666543 4667666553210 0122222222111479
Q ss_pred EeccccchH-HhhccCCccceecccCchHHHHHHhcCCcEeec-cccchhhhhhhhhcceeeeeEEeccccCCCCCcCHH
Q 046326 347 VVPSWAPQV-HILRHPSTGGFLSHCGWNSTLESICHGVPMIAW-PLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGRE 424 (476)
Q Consensus 347 ~~~~~~pq~-~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~-P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~ 424 (476)
.+.+|+++. .++..+++ +|+..|..|+.||+++|+|+|+. |..+.|..|+..+ ++.|+|+... +.+
T Consensus 259 ~~~g~~~~~~~l~~~aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~--~~~G~~~~~~--------~~~ 326 (380)
T PRK13609 259 KVFGYVENIDELFRVTSC--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYF--ERKGAAVVIR--------DDE 326 (380)
T ss_pred EEEechhhHHHHHHhccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHH--HhCCcEEEEC--------CHH
Confidence 999999885 68999996 99999988999999999999985 6777788899988 8889887532 478
Q ss_pred HHHHHHHHHhcCCh-hHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHH
Q 046326 425 EIERVVRLVMEGEE-GKVMRRRVQELKESASRELGDGGSSSDSLASFIKK 473 (476)
Q Consensus 425 ~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 473 (476)
++.++|.++++|++ .+.|+++++++ ....+.++.++.+++.
T Consensus 327 ~l~~~i~~ll~~~~~~~~m~~~~~~~--------~~~~s~~~i~~~i~~~ 368 (380)
T PRK13609 327 EVFAKTEALLQDDMKLLQMKEAMKSL--------YLPEPADHIVDDILAE 368 (380)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHh--------CCCchHHHHHHHHHHh
Confidence 99999999999876 22333333221 2344555555555544
No 37
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.67 E-value=8.9e-15 Score=146.01 Aligned_cols=351 Identities=16% Similarity=0.143 Sum_probs=177.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHH
Q 046326 7 QPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVT 86 (476)
Q Consensus 7 ~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (476)
+|+|++...++.||++|.+ ++++|++++ |++.++....+. .... ..+.++.++.++.. ++ .+...
T Consensus 1 ~~ki~i~~Ggt~G~i~~a~-l~~~L~~~~-~~~~~~~~~~~~----~~~~--~~~~~~~~~~l~~~---g~----~~~~~ 65 (380)
T PRK00025 1 PLRIAIVAGEVSGDLLGAG-LIRALKARA-PNLEFVGVGGPR----MQAA--GCESLFDMEELAVM---GL----VEVLP 65 (380)
T ss_pred CceEEEEecCcCHHHHHHH-HHHHHHhcC-CCcEEEEEccHH----HHhC--CCccccCHHHhhhc---cH----HHHHH
Confidence 3689999999999999999 999999998 888888754311 1111 11112333333211 11 01111
Q ss_pred HHHHHHHHhhcHHHHHHHHhcCCCCEEEE-CCCcchH--HHHHHHcCCCeEEEecccHHHHHHHhhcccccccccCCCCC
Q 046326 87 RLHAIVEESLSKSLKSVLTELCNPNALVI-DLFCTQA--FEICSQLSIPTYSFVTTSVHFFAFITYLPTLDHEVQGEFVD 163 (476)
Q Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~~pDlVI~-D~~~~~~--~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 163 (476)
.+.. ...... .++.+++++ +||+|+. ++...+. ...+...|||++.+......
T Consensus 66 ~~~~-~~~~~~-~~~~~l~~~-kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~~~--------------------- 121 (380)
T PRK00025 66 RLPR-LLKIRR-RLKRRLLAE-PPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPSVW--------------------- 121 (380)
T ss_pred HHHH-HHHHHH-HHHHHHHHc-CCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCchh---------------------
Confidence 1111 222334 688888888 9999885 4322333 23577889998864221000
Q ss_pred CCCCccCCCCCCCCccccCcccccCChhHHHHHHHHhhccCCCcEEEEcCccccchhHHHHhhhcccCCCCCCCCeEeec
Q 046326 164 LPEPIKIPGCPPVRPEDLLDQVRNRKIDEYKFFLLHVSRLPLAAGIFLNSWENLEFVPLKAIGEHSFYLQIPTPPINPIG 243 (476)
Q Consensus 164 ~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~p~~~~vG 243 (476)
...++ ..+.+ .+..+.++..+ +. +... +... + -+++++|
T Consensus 122 ----~~~~~-------------------~~~~~------~~~~d~i~~~~-~~-~~~~---~~~~---g----~~~~~~G 160 (380)
T PRK00025 122 ----AWRQG-------------------RAFKI------AKATDHVLALF-PF-EAAF---YDKL---G----VPVTFVG 160 (380)
T ss_pred ----hcCch-------------------HHHHH------HHHHhhheeCC-cc-CHHH---HHhc---C----CCeEEEC
Confidence 00000 00111 11122223222 11 1111 1111 1 1367788
Q ss_pred CCCCCCCCCCCChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHh-----CCCceEEEEecCCCCCcccccc
Q 046326 244 PLIKQDEPLSASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQ-----SKQRFIWVVRMPSDASASATFF 318 (476)
Q Consensus 244 pl~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~ 318 (476)
....+.........++.+-+.-.+++++|.+..||...........++++++. .+..++|..+.+..
T Consensus 161 ~p~~~~~~~~~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~~-------- 232 (380)
T PRK00025 161 HPLADAIPLLPDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPKR-------- 232 (380)
T ss_pred cCHHHhcccccChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChhh--------
Confidence 43322111001122233333322334467777777643211223334444322 23467776442210
Q ss_pred ccCCCCCCCCCCCChhHHHhhhcC-CCCeEeccccch-HHhhccCCccceecccCchHHHHHHhcCCcEeecccc-----
Q 046326 319 NVGSDVNDPKAYLPEGFLQRTRAQ-GAGMVVPSWAPQ-VHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLY----- 391 (476)
Q Consensus 319 ~~~~~~~~~~~~lp~~~~~~~~~~-~~~~~~~~~~pq-~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~----- 391 (476)
-+.+.+..... +-++.+.. ++ ..++..+++ +|+.+|.+++ |++++|+|+|++|..
T Consensus 233 -------------~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~ 294 (380)
T PRK00025 233 -------------REQIEEALAEYAGLEVTLLD--GQKREAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTF 294 (380)
T ss_pred -------------HHHHHHHHhhcCCCCeEEEc--ccHHHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHH
Confidence 02233333220 12333322 33 468889996 9999998887 999999999999432
Q ss_pred ---chhhhh-----hhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHHHHHhccCCC
Q 046326 392 ---AEQRMN-----AAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGEE-GKVMRRRVQELKESASRELGDGGS 462 (476)
Q Consensus 392 ---~DQ~~n-----a~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~~~~~~g~ 462 (476)
.+|..| +..+ .+.+++..+.. ...++++|.+++.++++|++ .+.|+++++++.+. + ..++
T Consensus 295 ~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~----~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~----~-~~~a 363 (380)
T PRK00025 295 WIAKRLVKVPYVSLPNLL--AGRELVPELLQ----EEATPEKLARALLPLLADGARRQALLEGFTELHQQ----L-RCGA 363 (380)
T ss_pred HHHHHHHcCCeeehHHHh--cCCCcchhhcC----CCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH----h-CCCH
Confidence 123222 2233 33344444443 46789999999999999987 33455555444443 2 3566
Q ss_pred hHHHHHHHHHHh
Q 046326 463 SSDSLASFIKKC 474 (476)
Q Consensus 463 ~~~~~~~~~~~~ 474 (476)
+.+.++.+.+.+
T Consensus 364 ~~~~~~~i~~~~ 375 (380)
T PRK00025 364 DERAAQAVLELL 375 (380)
T ss_pred HHHHHHHHHHHh
Confidence 666666655544
No 38
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.58 E-value=1.2e-13 Score=137.99 Aligned_cols=163 Identities=13% Similarity=0.212 Sum_probs=107.7
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHHHHHHh--CCCceEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCC
Q 046326 268 PDSVLFAVPGSGGTLTAEQVTEMAWGLEQ--SKQRFIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAG 345 (476)
Q Consensus 268 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~ 345 (476)
++++|++..|+.... ..+..+++++.+ .+..++++.|.+.. +-+.+.+.... .++
T Consensus 201 ~~~~ilv~~G~lg~~--k~~~~li~~~~~~~~~~~~vvv~G~~~~--------------------l~~~l~~~~~~-~~~ 257 (391)
T PRK13608 201 DKQTILMSAGAFGVS--KGFDTMITDILAKSANAQVVMICGKSKE--------------------LKRSLTAKFKS-NEN 257 (391)
T ss_pred CCCEEEEECCCcccc--hhHHHHHHHHHhcCCCceEEEEcCCCHH--------------------HHHHHHHHhcc-CCC
Confidence 345888888988621 234445555322 24566666543210 00122222211 157
Q ss_pred eEeccccchH-HhhccCCccceecccCchHHHHHHhcCCcEeec-cccchhhhhhhhhcceeeeeEEeccccCCCCCcCH
Q 046326 346 MVVPSWAPQV-HILRHPSTGGFLSHCGWNSTLESICHGVPMIAW-PLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGR 423 (476)
Q Consensus 346 ~~~~~~~pq~-~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~-P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~ 423 (476)
+.+.+|+++. .++..+++ +|+..|..|+.||+++|+|+|+. |..++|..|+..+ ++.|+|+... +.
T Consensus 258 v~~~G~~~~~~~~~~~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~--~~~G~g~~~~--------~~ 325 (391)
T PRK13608 258 VLILGYTKHMNEWMASSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYF--EEKGFGKIAD--------TP 325 (391)
T ss_pred eEEEeccchHHHHHHhhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHH--HhCCcEEEeC--------CH
Confidence 8888999875 58899996 99988888999999999999998 7767778999999 9999997642 58
Q ss_pred HHHHHHHHHHhcCCh-hHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHH
Q 046326 424 EEIERVVRLVMEGEE-GKVMRRRVQELKESASRELGDGGSSSDSLASFIKK 473 (476)
Q Consensus 424 ~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 473 (476)
+++.++|.++++|++ .+.|+++++++. ...+..+.++.+++.
T Consensus 326 ~~l~~~i~~ll~~~~~~~~m~~~~~~~~--------~~~s~~~i~~~l~~l 368 (391)
T PRK13608 326 EEAIKIVASLTNGNEQLTNMISTMEQDK--------IKYATQTICRDLLDL 368 (391)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHH
Confidence 889999999998876 334554444432 234545555554443
No 39
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=99.58 E-value=3.7e-13 Score=127.63 Aligned_cols=105 Identities=12% Similarity=0.167 Sum_probs=76.9
Q ss_pred cEEEEecCCCCCCCHHHHHHHHHHHHhC--CCceEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCCeE
Q 046326 270 SVLFAVPGSGGTLTAEQVTEMAWGLEQS--KQRFIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMV 347 (476)
Q Consensus 270 ~vvyvs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~ 347 (476)
+.|+|+||...... ....+++++... +..+.+++|.... ..+.+.+.... ..|+.
T Consensus 171 ~~iLi~~GG~d~~~--~~~~~l~~l~~~~~~~~i~vv~G~~~~--------------------~~~~l~~~~~~-~~~i~ 227 (279)
T TIGR03590 171 RRVLVSFGGADPDN--LTLKLLSALAESQINISITLVTGSSNP--------------------NLDELKKFAKE-YPNII 227 (279)
T ss_pred CeEEEEeCCcCCcC--HHHHHHHHHhccccCceEEEEECCCCc--------------------CHHHHHHHHHh-CCCEE
Confidence 36899998664322 345566776653 4567777766421 11333333221 15888
Q ss_pred eccccchH-HhhccCCccceecccCchHHHHHHhcCCcEeeccccchhhhhhhh
Q 046326 348 VPSWAPQV-HILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLYAEQRMNAAM 400 (476)
Q Consensus 348 ~~~~~pq~-~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~ 400 (476)
+..++++. .++..+++ +||+|| +|++|+++.|+|+|++|+..+|..||+.
T Consensus 228 ~~~~~~~m~~lm~~aDl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 228 LFIDVENMAELMNEADL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred EEeCHHHHHHHHHHCCE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 99999987 69999996 999999 9999999999999999999999999975
No 40
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=99.51 E-value=3.2e-12 Score=118.36 Aligned_cols=335 Identities=16% Similarity=0.142 Sum_probs=188.7
Q ss_pred CCCEEEEEcC--CCccCHHHHHHHHHHHHhc--CCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCC--CC--
Q 046326 6 LQPHVAVLPS--PGLGHLIPLLEFAKRLVLN--HGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVS--AV-- 77 (476)
Q Consensus 6 ~~~rIll~~~--p~~GHi~P~l~La~~L~~r--G~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-- 77 (476)
+.+||+|++. .+.||+-..+.||++|.+. | .+|++++..++... | ..|.+++|+.+|..... +.
T Consensus 8 ~~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~~-~~Il~IsG~~~~~~--F-----~~~~gVd~V~LPsl~k~~~G~~~ 79 (400)
T COG4671 8 KRPRILFYSHDLLGLGHLRRALRIAHALVEDYLG-FDILIISGGPPAGG--F-----PGPAGVDFVKLPSLIKGDNGEYG 79 (400)
T ss_pred ccceEEEEehhhccchHHHHHHHHHHHHhhcccC-ceEEEEeCCCccCC--C-----CCcccCceEecCceEecCCCcee
Confidence 3569999998 5779999999999999998 8 99999998863322 1 11238999999854221 11
Q ss_pred -CCCCCchHHHHHHHHHHhhcHHHHHHHHhcCCCCEEEECCCcchHHH-HHHHcCCCeEEEecccHHHHHHHhhcccccc
Q 046326 78 -TSDDMPVVTRLHAIVEESLSKSLKSVLTELCNPNALVIDLFCTQAFE-ICSQLSIPTYSFVTTSVHFFAFITYLPTLDH 155 (476)
Q Consensus 78 -~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~~~~-~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~ 155 (476)
.....+ ...+.+.-.. .+...++.+ +||++|+|.+-+.... +...+ .|.. .
T Consensus 80 ~~d~~~~----l~e~~~~Rs~-lil~t~~~f-kPDi~IVd~~P~Glr~EL~ptL----------------~yl~--~--- 132 (400)
T COG4671 80 LVDLDGD----LEETKKLRSQ-LILSTAETF-KPDIFIVDKFPFGLRFELLPTL----------------EYLK--T--- 132 (400)
T ss_pred eeecCCC----HHHHHHHHHH-HHHHHHHhc-CCCEEEEeccccchhhhhhHHH----------------HHHh--h---
Confidence 011112 1222333333 667777778 9999999986443211 11110 0000 0
Q ss_pred cccCCCCCCCCCccCCCCCCCCccccCcccccCC-hhHHHHHHHHhhccCCCcEEEE---cCccccchhHHHHhhhcccC
Q 046326 156 EVQGEFVDLPEPIKIPGCPPVRPEDLLDQVRNRK-IDEYKFFLLHVSRLPLAAGIFL---NSWENLEFVPLKAIGEHSFY 231 (476)
Q Consensus 156 ~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~s~~~le~~~~~~~~~~~~~ 231 (476)
.. + .+-+-.+++.+...... .+.-+...+..+.. .+.+.+ +.|.++...+. |+
T Consensus 133 ----------~~---t-~~vL~lr~i~D~p~~~~~~w~~~~~~~~I~r~--yD~V~v~GdP~f~d~~~~~~-------~~ 189 (400)
T COG4671 133 ----------TG---T-RLVLGLRSIRDIPQELEADWRRAETVRLINRF--YDLVLVYGDPDFYDPLTEFP-------FA 189 (400)
T ss_pred ----------cC---C-cceeehHhhhhchhhhccchhhhHHHHHHHHh--heEEEEecCccccChhhcCC-------cc
Confidence 00 0 00000111111100000 00001111111111 122221 33433332211 11
Q ss_pred CCCCCCCeEeecCCCCCCCCCCCChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHh-CCCc--eEEEEecC
Q 046326 232 LQIPTPPINPIGPLIKQDEPLSASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQ-SKQR--FIWVVRMP 308 (476)
Q Consensus 232 ~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~-~~~~--~i~~~~~~ 308 (476)
+ ..-.++.|+|.+ -.+-+....|.. | . +.+.-|+||-|... ...+.+...+.|-.. .+.+ .+.++|+.
T Consensus 190 ~-~i~~k~~ytG~v-q~~~~~~~~p~~---~--~-pE~~~Ilvs~GGG~-dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~ 260 (400)
T COG4671 190 P-AIRAKMRYTGFV-QRSLPHLPLPPH---E--A-PEGFDILVSVGGGA-DGAELIETALAAAQLLAGLNHKWLIVTGPF 260 (400)
T ss_pred H-hhhhheeEeEEe-eccCcCCCCCCc---C--C-CccceEEEecCCCh-hhHHHHHHHHHHhhhCCCCCcceEEEeCCC
Confidence 1 011358999988 211110011110 1 1 22236888777653 345666666655433 3433 33344432
Q ss_pred CCCCccccccccCCCCCCCCCCCChhHHHhhh---cCCCCeEeccccchH-HhhccCCccceecccCchHHHHHHhcCCc
Q 046326 309 SDASASATFFNVGSDVNDPKAYLPEGFLQRTR---AQGAGMVVPSWAPQV-HILRHPSTGGFLSHCGWNSTLESICHGVP 384 (476)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~---~~~~~~~~~~~~pq~-~iL~~~~~~~~I~HgG~~s~~eal~~GvP 384 (476)
.|+.-..+.. ++.+++.+..|-.+. .++.-++. +|+-||+||+.|-|++|+|
T Consensus 261 ----------------------MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~--vVSm~GYNTvCeILs~~k~ 316 (400)
T COG4671 261 ----------------------MPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARL--VVSMGGYNTVCEILSFGKP 316 (400)
T ss_pred ----------------------CCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhhe--eeecccchhhhHHHhCCCc
Confidence 3444322221 112689898998775 57777775 9999999999999999999
Q ss_pred Eeecccc---chhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCC
Q 046326 385 MIAWPLY---AEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGE 437 (476)
Q Consensus 385 ~l~~P~~---~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~ 437 (476)
.|++|+. .+|-.-|.|+ +++|+--.+.. ..++++.|+++|...++-+
T Consensus 317 aLivPr~~p~eEQliRA~Rl--~~LGL~dvL~p----e~lt~~~La~al~~~l~~P 366 (400)
T COG4671 317 ALIVPRAAPREEQLIRAQRL--EELGLVDVLLP----ENLTPQNLADALKAALARP 366 (400)
T ss_pred eEEeccCCCcHHHHHHHHHH--HhcCcceeeCc----ccCChHHHHHHHHhcccCC
Confidence 9999994 5899999999 99999888877 7899999999999998733
No 41
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.50 E-value=1.1e-15 Score=133.88 Aligned_cols=138 Identities=19% Similarity=0.253 Sum_probs=97.4
Q ss_pred EEEEecCCCCCCCH-HHHHHHHHHHHh--CCCceEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCCeE
Q 046326 271 VLFAVPGSGGTLTA-EQVTEMAWGLEQ--SKQRFIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMV 347 (476)
Q Consensus 271 vvyvs~GS~~~~~~-~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~ 347 (476)
+|+|+.||.....- +.+..+...+.. ....++|.+|.... ......+...+.++.
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~----------------------~~~~~~~~~~~~~v~ 58 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNY----------------------EELKIKVENFNPNVK 58 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCEC----------------------HHHCCCHCCTTCCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcH----------------------HHHHHHHhccCCcEE
Confidence 58999998863311 222223333332 25788888876521 111111111114788
Q ss_pred eccccc-hHHhhccCCccceecccCchHHHHHHhcCCcEeeccccc----hhhhhhhhhcceeeeeEEeccccCCCCCcC
Q 046326 348 VPSWAP-QVHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLYA----EQRMNAAMLTAEETGVAVKPETEPGKKVIG 422 (476)
Q Consensus 348 ~~~~~p-q~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~----DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~ 422 (476)
+.+|.+ ...++..+++ +|||||.||++|++++|+|+|++|... ||..||..+ ++.|+|..+.. ...+
T Consensus 59 ~~~~~~~m~~~m~~aDl--vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~--~~~g~~~~~~~----~~~~ 130 (167)
T PF04101_consen 59 VFGFVDNMAELMAAADL--VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKEL--AKKGAAIMLDE----SELN 130 (167)
T ss_dssp EECSSSSHHHHHHHHSE--EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHH--HHCCCCCCSEC----CC-S
T ss_pred EEechhhHHHHHHHcCE--EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHH--HHcCCccccCc----ccCC
Confidence 889999 5579999996 999999999999999999999999988 999999999 99999999988 6788
Q ss_pred HHHHHHHHHHHhcCCh
Q 046326 423 REEIERVVRLVMEGEE 438 (476)
Q Consensus 423 ~~~l~~ai~~~l~~~~ 438 (476)
.++|.++|.+++.++.
T Consensus 131 ~~~L~~~i~~l~~~~~ 146 (167)
T PF04101_consen 131 PEELAEAIEELLSDPE 146 (167)
T ss_dssp CCCHHHHHHCHCCCHH
T ss_pred HHHHHHHHHHHHcCcH
Confidence 9999999999998775
No 42
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.47 E-value=9.4e-12 Score=124.10 Aligned_cols=111 Identities=14% Similarity=0.190 Sum_probs=82.1
Q ss_pred CCeEeccccchH-HhhccCCccceecccCchHHHHHHhcCCcEeeccccchhh-hhhhhhcceeeeeEEeccccCCCCCc
Q 046326 344 AGMVVPSWAPQV-HILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLYAEQR-MNAAMLTAEETGVAVKPETEPGKKVI 421 (476)
Q Consensus 344 ~~~~~~~~~pq~-~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~-~na~~~~~~~~G~G~~l~~~~~~~~~ 421 (476)
.++.+.+|+++. .++..+++ +|+.+|.+|+.||+++|+|+|+.+....|. .|+..+ .+.|.|+.+ -
T Consensus 265 ~~v~~~G~~~~~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i--~~~g~g~~~--------~ 332 (382)
T PLN02605 265 IPVKVRGFVTNMEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYV--VDNGFGAFS--------E 332 (382)
T ss_pred CCeEEEeccccHHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHH--HhCCceeec--------C
Confidence 568888999875 58888886 999999999999999999999998776675 689888 788998754 2
Q ss_pred CHHHHHHHHHHHhcC-Ch-hHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHh
Q 046326 422 GREEIERVVRLVMEG-EE-GKVMRRRVQELKESASRELGDGGSSSDSLASFIKKC 474 (476)
Q Consensus 422 ~~~~l~~ai~~~l~~-~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 474 (476)
++++|.++|.+++.+ ++ .+.|++++++. ....++.+.++.+.+.+
T Consensus 333 ~~~~la~~i~~ll~~~~~~~~~m~~~~~~~--------~~~~a~~~i~~~l~~~~ 379 (382)
T PLN02605 333 SPKEIARIVAEWFGDKSDELEAMSENALKL--------ARPEAVFDIVHDLHELV 379 (382)
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------cCCchHHHHHHHHHHHh
Confidence 589999999999987 54 22233333322 23455555555555543
No 43
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=99.46 E-value=1.1e-11 Score=123.41 Aligned_cols=109 Identities=21% Similarity=0.253 Sum_probs=76.3
Q ss_pred eEeccccch-HHhhccCCccceecccCchHHHHHHhcCCcEeeccccchhhhhhhhhcceee----eeEEeccccCCCCC
Q 046326 346 MVVPSWAPQ-VHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEET----GVAVKPETEPGKKV 420 (476)
Q Consensus 346 ~~~~~~~pq-~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~----G~G~~l~~~~~~~~ 420 (476)
+.+..+..+ ..++..+++ +|+-+|..| .|+...|+|+|++|+-..|. |+..+ ++. |.++.+..
T Consensus 281 ~~v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~--~~~~~l~g~~~~l~~------ 348 (396)
T TIGR03492 281 LEVLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFA--EAQSRLLGGSVFLAS------ 348 (396)
T ss_pred eEEEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHH--HhhHhhcCCEEecCC------
Confidence 444455544 468889996 999999766 99999999999999888887 98776 553 76666644
Q ss_pred cCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHH
Q 046326 421 IGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGGSSSDSLASFIK 472 (476)
Q Consensus 421 ~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 472 (476)
.+.+.|.+++.++++|++ .+++.. +..+..+..++++.+.++.+.+
T Consensus 349 ~~~~~l~~~l~~ll~d~~---~~~~~~---~~~~~~lg~~~a~~~ia~~i~~ 394 (396)
T TIGR03492 349 KNPEQAAQVVRQLLADPE---LLERCR---RNGQERMGPPGASARIAESILK 394 (396)
T ss_pred CCHHHHHHHHHHHHcCHH---HHHHHH---HHHHHhcCCCCHHHHHHHHHHH
Confidence 445999999999999876 443333 1222223445666666555544
No 44
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=99.34 E-value=1.1e-12 Score=111.10 Aligned_cols=120 Identities=18% Similarity=0.268 Sum_probs=77.3
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHH
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLH 89 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (476)
|+|++.|+.||++|+++||++|++|| |+|++++.+. +...++.. |+.|+.++.. ... +........+.
T Consensus 1 Ili~~~Gt~Ghv~P~lala~~L~~rG-h~V~~~~~~~------~~~~v~~~--Gl~~~~~~~~--~~~-~~~~~~~~~~~ 68 (139)
T PF03033_consen 1 ILIATGGTRGHVYPFLALARALRRRG-HEVRLATPPD------FRERVEAA--GLEFVPIPGD--SRL-PRSLEPLANLR 68 (139)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTT--EEEEEETGG------GHHHHHHT--T-EEEESSSC--GGG-GHHHHHHHHHH
T ss_pred CEEEEcCChhHHHHHHHHHHHHhccC-CeEEEeeccc------ceeccccc--CceEEEecCC--cCc-Ccccchhhhhh
Confidence 78999999999999999999999999 9999998774 44444444 9999999854 011 11001111111
Q ss_pred HH------HHHhhcHHHHHHHHhc------C-CCCEEEECCCcchHHHHHHHcCCCeEEEecccHH
Q 046326 90 AI------VEESLSKSLKSVLTEL------C-NPNALVIDLFCTQAFEICSQLSIPTYSFVTTSVH 142 (476)
Q Consensus 90 ~~------~~~~~~~~l~~~l~~~------~-~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~ 142 (476)
.. +..... .++....+. . ..|+++.+.....+..+||++|||++.....+.+
T Consensus 69 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p~~ 133 (139)
T PF03033_consen 69 RLARLIRGLEEAMR-ILARFRPDLVVAAGGYVADDVIIAAPLAFAAALVAEQLGIPGVANRLFPWF 133 (139)
T ss_dssp CHHHHHHHHHHHHH-HHHHHHHCCCCHCTTTTECCEECHHHHHTHHHHHHHHHTS-EEEEESSGGG
T ss_pred hHHHHhhhhhHHHH-HhhccCcchhhhccCcccchHHHhhhhcCccceeEhhhCchHHHHhhCCcC
Confidence 11 111111 222222221 1 6788888887777888999999999998877654
No 45
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.23 E-value=1.2e-08 Score=104.71 Aligned_cols=139 Identities=13% Similarity=0.086 Sum_probs=87.1
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhC-CCceEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCCeEec
Q 046326 271 VLFAVPGSGGTLTAEQVTEMAWGLEQS-KQRFIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVP 349 (476)
Q Consensus 271 vvyvs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~ 349 (476)
.+++..|++... ..+..++++++.. +.++++ +|.+. .-+.+.+.... .++.+.
T Consensus 264 ~~i~~vGrl~~~--K~~~~li~a~~~~~~~~l~i-vG~G~---------------------~~~~l~~~~~~--~~V~f~ 317 (465)
T PLN02871 264 PLIVYVGRLGAE--KNLDFLKRVMERLPGARLAF-VGDGP---------------------YREELEKMFAG--TPTVFT 317 (465)
T ss_pred eEEEEeCCCchh--hhHHHHHHHHHhCCCcEEEE-EeCCh---------------------HHHHHHHHhcc--CCeEEe
Confidence 445555777422 3345566666654 455543 44321 11334444444 688888
Q ss_pred cccchH---HhhccCCccceecccC----chHHHHHHhcCCcEeeccccchhhhhhhhhccee---eeeEEeccccCCCC
Q 046326 350 SWAPQV---HILRHPSTGGFLSHCG----WNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEE---TGVAVKPETEPGKK 419 (476)
Q Consensus 350 ~~~pq~---~iL~~~~~~~~I~HgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~---~G~G~~l~~~~~~~ 419 (476)
+++++. .++..+++ ||.-.. ..++.||+++|+|+|+....+ ....+ ++ -+.|..++.
T Consensus 318 G~v~~~ev~~~~~~aDv--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv--~~~~~~~~G~lv~~----- 384 (465)
T PLN02871 318 GMLQGDELSQAYASGDV--FVMPSESETLGFVVLEAMASGVPVVAARAGG----IPDII--PPDQEGKTGFLYTP----- 384 (465)
T ss_pred ccCCHHHHHHHHHHCCE--EEECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhh--hcCCCCCceEEeCC-----
Confidence 999764 37788886 664432 357899999999999876432 22334 44 567777755
Q ss_pred CcCHHHHHHHHHHHhcCCh-hHHHHHHHHHH
Q 046326 420 VIGREEIERVVRLVMEGEE-GKVMRRRVQEL 449 (476)
Q Consensus 420 ~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l 449 (476)
-+.+++.++|.++++|++ .+.+.+++++.
T Consensus 385 -~d~~~la~~i~~ll~~~~~~~~~~~~a~~~ 414 (465)
T PLN02871 385 -GDVDDCVEKLETLLADPELRERMGAAAREE 414 (465)
T ss_pred -CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 367999999999998876 34455555543
No 46
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.22 E-value=2.7e-08 Score=97.84 Aligned_cols=109 Identities=13% Similarity=0.132 Sum_probs=77.1
Q ss_pred CCeEeccccchHH---hhccCCccceecccC----chHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccC
Q 046326 344 AGMVVPSWAPQVH---ILRHPSTGGFLSHCG----WNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEP 416 (476)
Q Consensus 344 ~~~~~~~~~pq~~---iL~~~~~~~~I~HgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~ 416 (476)
.++.+.+|+++.. ++..+++ +|+.+. .+++.||+++|+|+|+.+..+ +...+ ++.+.|.....
T Consensus 247 ~~v~~~g~~~~~~~~~~~~~~d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i--~~~~~g~~~~~-- 316 (364)
T cd03814 247 PNVHFLGFLDGEELAAAYASADV--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIV--TDGENGLLVEP-- 316 (364)
T ss_pred CcEEEEeccCHHHHHHHHHhCCE--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhh--cCCcceEEcCC--
Confidence 6899999998764 7888886 776654 478999999999999987543 45566 66688877755
Q ss_pred CCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHh
Q 046326 417 GKKVIGREEIERVVRLVMEGEE-GKVMRRRVQELKESASRELGDGGSSSDSLASFIKKC 474 (476)
Q Consensus 417 ~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 474 (476)
-+.+++.++|.+++.|++ .+.+.+++++.. +.-+.+...+++++.+
T Consensus 317 ----~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 317 ----GDAEAFAAALAALLADPELRRRMAARARAEA--------ERRSWEAFLDNLLEAY 363 (364)
T ss_pred ----CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH--------hhcCHHHHHHHHHHhh
Confidence 467889999999999877 233333333322 2355556666666544
No 47
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.08 E-value=3.2e-07 Score=89.91 Aligned_cols=81 Identities=12% Similarity=0.122 Sum_probs=60.7
Q ss_pred CCeEeccccchHH---hhccCCccceec----ccCc-hHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEecccc
Q 046326 344 AGMVVPSWAPQVH---ILRHPSTGGFLS----HCGW-NSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETE 415 (476)
Q Consensus 344 ~~~~~~~~~pq~~---iL~~~~~~~~I~----HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~ 415 (476)
.++...+|+++.. ++..+++ +|+ ..|+ .++.||+++|+|+|+.+.. .+...+ ++.+.|..+..
T Consensus 243 ~~v~~~g~~~~~~~~~~~~~ad~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i--~~~~~g~~~~~- 313 (359)
T cd03823 243 PRVEFLGAYPQEEIDDFYAEIDV--LVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELV--RDGVNGLLFPP- 313 (359)
T ss_pred CeEEEeCCCCHHHHHHHHHhCCE--EEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHh--cCCCcEEEECC-
Confidence 6888999997654 6888886 552 2333 5899999999999997653 345556 55556777765
Q ss_pred CCCCCcCHHHHHHHHHHHhcCCh
Q 046326 416 PGKKVIGREEIERVVRLVMEGEE 438 (476)
Q Consensus 416 ~~~~~~~~~~l~~ai~~~l~~~~ 438 (476)
-+.+++.+++.+++++++
T Consensus 314 -----~d~~~l~~~i~~l~~~~~ 331 (359)
T cd03823 314 -----GDAEDLAAALERLIDDPD 331 (359)
T ss_pred -----CCHHHHHHHHHHHHhChH
Confidence 358999999999999776
No 48
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.07 E-value=4.6e-07 Score=90.73 Aligned_cols=92 Identities=12% Similarity=0.198 Sum_probs=66.8
Q ss_pred CCeEeccccchHH---hhccCCccceeccc---C-chHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccC
Q 046326 344 AGMVVPSWAPQVH---ILRHPSTGGFLSHC---G-WNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEP 416 (476)
Q Consensus 344 ~~~~~~~~~pq~~---iL~~~~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~ 416 (476)
+++.+.+|+|+.+ ++..+++ +++.+ | -.++.||+++|+|+|+....+ ....+ ++.+.|..++.
T Consensus 283 ~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i--~~~~~g~~~~~-- 352 (398)
T cd03800 283 DRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIV--VDGVTGLLVDP-- 352 (398)
T ss_pred ceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHc--cCCCCeEEeCC--
Confidence 5788999999765 5888886 66432 2 368999999999999876543 44456 66677887765
Q ss_pred CCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHH
Q 046326 417 GKKVIGREEIERVVRLVMEGEE-GKVMRRRVQEL 449 (476)
Q Consensus 417 ~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l 449 (476)
-+.+++.++|.+++++++ ...+.+++++.
T Consensus 353 ----~~~~~l~~~i~~l~~~~~~~~~~~~~a~~~ 382 (398)
T cd03800 353 ----RDPEALAAALRRLLTDPALRRRLSRAGLRR 382 (398)
T ss_pred ----CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 468999999999998876 34455555443
No 49
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.05 E-value=2.5e-07 Score=91.54 Aligned_cols=94 Identities=15% Similarity=0.149 Sum_probs=65.6
Q ss_pred CCeEeccccchHH---hhccCCccceecccC---------chHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEe
Q 046326 344 AGMVVPSWAPQVH---ILRHPSTGGFLSHCG---------WNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVK 411 (476)
Q Consensus 344 ~~~~~~~~~pq~~---iL~~~~~~~~I~HgG---------~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~ 411 (476)
+++.+.+++++.. ++..+++ +|.... -+++.||+++|+|+|+.+..+.+.. + ...+.|..
T Consensus 275 ~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~----~--~~~~~g~~ 346 (394)
T cd03794 275 DNVTFLGRVPKEELPELLAAADV--GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAEL----V--EEAGAGLV 346 (394)
T ss_pred CcEEEeCCCChHHHHHHHHhhCe--eEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhh----h--ccCCcceE
Confidence 6888889998654 6778886 553222 3457999999999999987654433 2 33366766
Q ss_pred ccccCCCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHHHH
Q 046326 412 PETEPGKKVIGREEIERVVRLVMEGEE-GKVMRRRVQELKE 451 (476)
Q Consensus 412 l~~~~~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~ 451 (476)
++. -+.+++.++|.++++|++ .+.+++++++...
T Consensus 347 ~~~------~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T cd03794 347 VPP------GDPEALAAAILELLDDPEERAEMGENGRRYVE 381 (394)
T ss_pred eCC------CCHHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 655 378999999999998776 4445555554443
No 50
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.04 E-value=1.1e-06 Score=86.46 Aligned_cols=94 Identities=11% Similarity=0.174 Sum_probs=66.7
Q ss_pred CCeEeccccchHH---hhccCCccceecc----cCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccC
Q 046326 344 AGMVVPSWAPQVH---ILRHPSTGGFLSH----CGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEP 416 (476)
Q Consensus 344 ~~~~~~~~~pq~~---iL~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~ 416 (476)
+++...+++|+.. ++.++++ +|.. +...++.||+++|+|+|+... ...+..+ ++.+.|..+..
T Consensus 259 ~~v~~~g~~~~~~~~~~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~----~~~~~~i--~~~~~g~~~~~-- 328 (374)
T cd03817 259 DRVIFTGFVPREELPDYYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVDA----PGLPDLV--ADGENGFLFPP-- 328 (374)
T ss_pred CcEEEeccCChHHHHHHHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeCC----CChhhhe--ecCceeEEeCC--
Confidence 6888899998754 6778886 5533 334789999999999998754 3455566 66567777765
Q ss_pred CCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHH
Q 046326 417 GKKVIGREEIERVVRLVMEGEE-GKVMRRRVQELKES 452 (476)
Q Consensus 417 ~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~ 452 (476)
.+ . ++.+++.+++++++ .+.+++++++..++
T Consensus 329 --~~--~-~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 360 (374)
T cd03817 329 --GD--E-ALAEALLRLLQDPELRRRLSKNAEESAEK 360 (374)
T ss_pred --CC--H-HHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 22 2 89999999998876 34455555555444
No 51
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.01 E-value=2.1e-06 Score=86.74 Aligned_cols=112 Identities=13% Similarity=0.119 Sum_probs=72.7
Q ss_pred CCeEeccccchH---HhhccCCccceecccCc------hHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccc
Q 046326 344 AGMVVPSWAPQV---HILRHPSTGGFLSHCGW------NSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPET 414 (476)
Q Consensus 344 ~~~~~~~~~pq~---~iL~~~~~~~~I~HgG~------~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~ 414 (476)
+++.+.+|+|+. .++..+++..+.+..+. +.+.|++++|+|+|+....+. .....+ + +.|+.++.
T Consensus 284 ~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~--~~~~~i--~--~~G~~~~~ 357 (412)
T PRK10307 284 PNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGT--ELGQLV--E--GIGVCVEP 357 (412)
T ss_pred CceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCc--hHHHHH--h--CCcEEeCC
Confidence 478888999865 46888887444444332 347899999999999865331 112244 3 67777654
Q ss_pred cCCCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHh
Q 046326 415 EPGKKVIGREEIERVVRLVMEGEE-GKVMRRRVQELKESASRELGDGGSSSDSLASFIKKC 474 (476)
Q Consensus 415 ~~~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 474 (476)
-+.++++++|.++++|++ .+.+++++++..++ .-+.+..++++++.+
T Consensus 358 ------~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~-------~fs~~~~~~~~~~~~ 405 (412)
T PRK10307 358 ------ESVEALVAAIAALARQALLRPKLGTVAREYAER-------TLDKENVLRQFIADI 405 (412)
T ss_pred ------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH-------HcCHHHHHHHHHHHH
Confidence 468999999999998876 45566666655443 334444555554443
No 52
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.97 E-value=8e-07 Score=88.12 Aligned_cols=92 Identities=15% Similarity=0.144 Sum_probs=64.4
Q ss_pred CCeEeccccchH-HhhccCCccceecc----cCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCC
Q 046326 344 AGMVVPSWAPQV-HILRHPSTGGFLSH----CGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGK 418 (476)
Q Consensus 344 ~~~~~~~~~pq~-~iL~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~ 418 (476)
+++...++.++. .++..+++ +|.- |.-.++.||+++|+|+|+... ...+..+ ++-..|..++.
T Consensus 253 ~~v~~~g~~~~~~~~~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s~~----~~~~e~i--~~~~~G~~~~~---- 320 (371)
T cd04962 253 DDVLFLGKQDHVEELLSIADL--FLLPSEKESFGLAALEAMACGVPVVASNA----GGIPEVV--KHGETGFLVDV---- 320 (371)
T ss_pred ceEEEecCcccHHHHHHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEeCC----CCchhhh--cCCCceEEcCC----
Confidence 468888887764 57888886 5522 334699999999999999654 3345555 55456766554
Q ss_pred CCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHH
Q 046326 419 KVIGREEIERVVRLVMEGEE-GKVMRRRVQEL 449 (476)
Q Consensus 419 ~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l 449 (476)
-+.+++.+++.++++++. ...+++++++.
T Consensus 321 --~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~ 350 (371)
T cd04962 321 --GDVEAMAEYALSLLEDDELWQEFSRAARNR 350 (371)
T ss_pred --CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 468999999999998776 34456665554
No 53
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=98.97 E-value=2.1e-06 Score=83.87 Aligned_cols=331 Identities=14% Similarity=0.086 Sum_probs=165.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHH
Q 046326 9 HVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRL 88 (476)
Q Consensus 9 rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (476)
+|++++....|+...+..++++|.++| |+|++++....... .... .+++++.++.... .......+
T Consensus 1 kIl~i~~~~~g~~~~~~~l~~~L~~~g-~~v~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~------~~~~~~~~ 66 (359)
T cd03808 1 KILHIVTVDGGLYSFRLPLIKALRAAG-YEVHVVAPPGDELE-----ELEA--LGVKVIPIPLDRR------GINPFKDL 66 (359)
T ss_pred CeeEEEecchhHHHHHHHHHHHHHhcC-CeeEEEecCCCccc-----cccc--CCceEEecccccc------ccChHhHH
Confidence 477777778899999999999999999 99999987642211 1111 1677666653211 00111111
Q ss_pred HHHHHHhhcHHHHHHHHhcCCCCEEEECCCcchH--HHHHHHcCCCeEEEecccHHHHHHHhhcccccccccCCCCCCCC
Q 046326 89 HAIVEESLSKSLKSVLTELCNPNALVIDLFCTQA--FEICSQLSIPTYSFVTTSVHFFAFITYLPTLDHEVQGEFVDLPE 166 (476)
Q Consensus 89 ~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~~--~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 166 (476)
. ... .+...+++. +||+|++....... ..++...+.|.+.........
T Consensus 67 ~-----~~~-~~~~~~~~~-~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----------------------- 116 (359)
T cd03808 67 K-----ALL-RLYRLLRKE-RPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGF----------------------- 116 (359)
T ss_pred H-----HHH-HHHHHHHhc-CCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcch-----------------------
Confidence 1 122 466677777 99999987543332 234444566655543322110
Q ss_pred CccCCCCCCCCccccCcccccCChhHHHHHHHHhhccCCCcEEEEcCccccchhHHHHhhhcccCCCCCCCCeEeecCCC
Q 046326 167 PIKIPGCPPVRPEDLLDQVRNRKIDEYKFFLLHVSRLPLAAGIFLNSWENLEFVPLKAIGEHSFYLQIPTPPINPIGPLI 246 (476)
Q Consensus 167 ~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~p~~~~vGpl~ 246 (476)
. .... .. ....+....+ ......+.++..+-...+ .+.... ..+....++.++...
T Consensus 117 ~----~~~~--------~~---~~~~~~~~~~--~~~~~~d~ii~~s~~~~~-----~~~~~~--~~~~~~~~~~~~~~~ 172 (359)
T cd03808 117 V----FTSG--------GL---KRRLYLLLER--LALRFTDKVIFQNEDDRD-----LALKLG--IIKKKKTVLIPGSGV 172 (359)
T ss_pred h----hccc--------hh---HHHHHHHHHH--HHHhhccEEEEcCHHHHH-----HHHHhc--CCCcCceEEecCCCC
Confidence 0 0000 00 0001111111 112334565554422211 111111 000001233333222
Q ss_pred CCCCCCCCChhhHhhhccCCCCCcEEEEecCCCCC-CCHHHHHHHHHHHHh--CCCceEEEEecCCCCCccccccccCCC
Q 046326 247 KQDEPLSASDEECLAWLDKQPPDSVLFAVPGSGGT-LTAEQVTEMAWGLEQ--SKQRFIWVVRMPSDASASATFFNVGSD 323 (476)
Q Consensus 247 ~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~-~~~~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~ 323 (476)
...... ..+.. ..+++.+++..|+... ...+.+.+.++.+.+ .+..+++ +|....
T Consensus 173 ~~~~~~-~~~~~-------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i-~G~~~~------------- 230 (359)
T cd03808 173 DLDRFS-PSPEP-------IPEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLL-VGDGDE------------- 230 (359)
T ss_pred ChhhcC-ccccc-------cCCCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEE-EcCCCc-------------
Confidence 111000 00000 1223367777788753 334555555555543 2344444 333211
Q ss_pred CCCCCCCCChh-HHHhhhcCCCCeEeccccchH-HhhccCCccceecccC----chHHHHHHhcCCcEeeccccchhhhh
Q 046326 324 VNDPKAYLPEG-FLQRTRAQGAGMVVPSWAPQV-HILRHPSTGGFLSHCG----WNSTLESICHGVPMIAWPLYAEQRMN 397 (476)
Q Consensus 324 ~~~~~~~lp~~-~~~~~~~~~~~~~~~~~~pq~-~iL~~~~~~~~I~HgG----~~s~~eal~~GvP~l~~P~~~DQ~~n 397 (476)
.. ..-.. ....... .++...++..+. .++..+++ +|..+. .+++.||+++|+|+|+.+.. .+
T Consensus 231 --~~--~~~~~~~~~~~~~--~~v~~~g~~~~~~~~~~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~----~~ 298 (359)
T cd03808 231 --EN--PAAILEIEKLGLE--GRVEFLGFRDDVPELLAAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVP----GC 298 (359)
T ss_pred --ch--hhHHHHHHhcCCc--ceEEEeeccccHHHHHHhccE--EEecCcccCcchHHHHHHHcCCCEEEecCC----Cc
Confidence 00 00000 1111112 577777875553 58888886 664432 57899999999999997553 23
Q ss_pred hhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHH
Q 046326 398 AAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGEE-GKVMRRRVQEL 449 (476)
Q Consensus 398 a~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l 449 (476)
...+ ++.+.|..++. -+.+++.++|.+++.+++ .+.+.+++++.
T Consensus 299 ~~~i--~~~~~g~~~~~------~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 343 (359)
T cd03808 299 REAV--IDGVNGFLVPP------GDAEALADAIERLIEDPELRARMGQAARKR 343 (359)
T ss_pred hhhh--hcCcceEEECC------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 4455 55567776654 468999999999998876 33344444443
No 54
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.96 E-value=3.8e-07 Score=92.47 Aligned_cols=85 Identities=16% Similarity=0.237 Sum_probs=61.6
Q ss_pred HhhccCCccceec--c--cCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHH
Q 046326 356 HILRHPSTGGFLS--H--CGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVR 431 (476)
Q Consensus 356 ~iL~~~~~~~~I~--H--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~ 431 (476)
.++..+++ +|+. . +|..++.||+++|+|+|+.|...++......+ .+.|+++.. -+.++|+++|.
T Consensus 315 ~~y~~aDi-~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~--~~~g~~~~~--------~d~~~La~~l~ 383 (425)
T PRK05749 315 LLYAIADI-AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERL--LQAGAAIQV--------EDAEDLAKAVT 383 (425)
T ss_pred HHHHhCCE-EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHH--HHCCCeEEE--------CCHHHHHHHHH
Confidence 57788886 3442 1 34446999999999999999988888777776 566766553 24799999999
Q ss_pred HHhcCCh-hHHHHHHHHHHHH
Q 046326 432 LVMEGEE-GKVMRRRVQELKE 451 (476)
Q Consensus 432 ~~l~~~~-~~~~~~~a~~l~~ 451 (476)
++++|++ .+.|.++++++.+
T Consensus 384 ~ll~~~~~~~~m~~~a~~~~~ 404 (425)
T PRK05749 384 YLLTDPDARQAYGEAGVAFLK 404 (425)
T ss_pred HHhcCHHHHHHHHHHHHHHHH
Confidence 9999876 4445555555443
No 55
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=98.93 E-value=4.5e-06 Score=84.29 Aligned_cols=91 Identities=13% Similarity=0.212 Sum_probs=61.6
Q ss_pred CCeEe-ccccchHH---hhccCCccceec-c---cC---chHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEec
Q 046326 344 AGMVV-PSWAPQVH---ILRHPSTGGFLS-H---CG---WNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKP 412 (476)
Q Consensus 344 ~~~~~-~~~~pq~~---iL~~~~~~~~I~-H---gG---~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l 412 (476)
+++.. .+|+|..+ +|..+++ +|. + -| -+++.||+++|+|+|+... ......+ ++.+.|+.+
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~----~~~~eiv--~~~~~G~lv 365 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDF----KCIDELV--KHGENGLVF 365 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCC----CCHHHHh--cCCCCEEEE
Confidence 34554 36887543 6788887 552 1 12 3579999999999999654 2344555 666678765
Q ss_pred cccCCCCCcCHHHHHHHHHHHhcC---Ch-hHHHHHHHHHHH
Q 046326 413 ETEPGKKVIGREEIERVVRLVMEG---EE-GKVMRRRVQELK 450 (476)
Q Consensus 413 ~~~~~~~~~~~~~l~~ai~~~l~~---~~-~~~~~~~a~~l~ 450 (476)
. +.++++++|.++++| ++ .+.|++++++..
T Consensus 366 -~-------d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 366 -G-------DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred -C-------CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 2 589999999999998 44 455666665544
No 56
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=98.92 E-value=1.6e-07 Score=84.95 Aligned_cols=134 Identities=15% Similarity=0.189 Sum_probs=94.3
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhh-hcCCCCeEec
Q 046326 271 VLFAVPGSGGTLTAEQVTEMAWGLEQSKQRFIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRT-RAQGAGMVVP 349 (476)
Q Consensus 271 vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~~~~~~ 349 (476)
-|+|++|..- .....-+++..|.+.++.+-.+++...+ . + ..+..++ .. +++...
T Consensus 160 ~ilI~lGGsD--pk~lt~kvl~~L~~~~~nl~iV~gs~~p----------------~---l-~~l~k~~~~~--~~i~~~ 215 (318)
T COG3980 160 DILITLGGSD--PKNLTLKVLAELEQKNVNLHIVVGSSNP----------------T---L-KNLRKRAEKY--PNINLY 215 (318)
T ss_pred eEEEEccCCC--hhhhHHHHHHHhhccCeeEEEEecCCCc----------------c---h-hHHHHHHhhC--CCeeeE
Confidence 5999987652 2334556777787777665566653321 1 1 2222222 22 455554
Q ss_pred cccchH-HhhccCCccceecccCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHH
Q 046326 350 SWAPQV-HILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIER 428 (476)
Q Consensus 350 ~~~pq~-~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ 428 (476)
-...++ .++..++. .|+-+| .|+.|++.-|+|.+++|+...|-.-|+.. +.+|+-..+.. .++...+..
T Consensus 216 ~~~~dma~LMke~d~--aI~AaG-stlyEa~~lgvP~l~l~~a~NQ~~~a~~f--~~lg~~~~l~~-----~l~~~~~~~ 285 (318)
T COG3980 216 IDTNDMAELMKEADL--AISAAG-STLYEALLLGVPSLVLPLAENQIATAKEF--EALGIIKQLGY-----HLKDLAKDY 285 (318)
T ss_pred ecchhHHHHHHhcch--heeccc-hHHHHHHHhcCCceEEeeeccHHHHHHHH--HhcCchhhccC-----CCchHHHHH
Confidence 444444 47888884 888887 58999999999999999999999999999 89998888776 377777777
Q ss_pred HHHHHhcCCh
Q 046326 429 VVRLVMEGEE 438 (476)
Q Consensus 429 ai~~~l~~~~ 438 (476)
-+.++.+|..
T Consensus 286 ~~~~i~~d~~ 295 (318)
T COG3980 286 EILQIQKDYA 295 (318)
T ss_pred HHHHhhhCHH
Confidence 7888888764
No 57
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=98.92 E-value=3.2e-06 Score=83.43 Aligned_cols=111 Identities=11% Similarity=0.127 Sum_probs=72.9
Q ss_pred CCeEeccccc-hH---HhhccCCccceeccc----CchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEecccc
Q 046326 344 AGMVVPSWAP-QV---HILRHPSTGGFLSHC----GWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETE 415 (476)
Q Consensus 344 ~~~~~~~~~p-q~---~iL~~~~~~~~I~Hg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~ 415 (476)
.++...+|++ +. .++..+++ +|... ..+++.||+++|+|+|+.... .....+ ...+.|..++.
T Consensus 244 ~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~----~~~e~~--~~~~~g~~~~~- 314 (365)
T cd03825 244 FPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVG----GIPDIV--DHGVTGYLAKP- 314 (365)
T ss_pred CceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCC----CChhhe--eCCCceEEeCC-
Confidence 5788889998 43 46888886 66643 347999999999999986542 222334 44346666544
Q ss_pred CCCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHhh
Q 046326 416 PGKKVIGREEIERVVRLVMEGEE-GKVMRRRVQELKESASRELGDGGSSSDSLASFIKKCK 475 (476)
Q Consensus 416 ~~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 475 (476)
.+.+++.+++.+++++++ ...+.+++++..+ +.-+.+...+++++-++
T Consensus 315 -----~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~-------~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 315 -----GDPEDLAEGIEWLLADPDEREELGEAARELAE-------NEFDSRVQAKRYLSLYE 363 (365)
T ss_pred -----CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHh
Confidence 578999999999998876 3344455444332 24455556666665543
No 58
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=98.86 E-value=3.8e-06 Score=84.32 Aligned_cols=95 Identities=11% Similarity=0.119 Sum_probs=64.7
Q ss_pred CCeEeccccchHH---hhccCCccceecc-cCc-hHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCC
Q 046326 344 AGMVVPSWAPQVH---ILRHPSTGGFLSH-CGW-NSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGK 418 (476)
Q Consensus 344 ~~~~~~~~~pq~~---iL~~~~~~~~I~H-gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~ 418 (476)
+++.+.+++|+.. +|..+++-.+.+. .|. .++.||+++|+|+|+... ......+ ..-..|..++.
T Consensus 281 ~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~----~g~~e~i--~~~~~G~lv~~---- 350 (396)
T cd03818 281 SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDT----APVREVI--TDGENGLLVDF---- 350 (396)
T ss_pred ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCC----CCchhhc--ccCCceEEcCC----
Confidence 6788999999764 6677886222222 232 489999999999998643 3444555 44445776654
Q ss_pred CCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHHH
Q 046326 419 KVIGREEIERVVRLVMEGEE-GKVMRRRVQELK 450 (476)
Q Consensus 419 ~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~ 450 (476)
-+.++++++|.++++|++ ...+.+++++..
T Consensus 351 --~d~~~la~~i~~ll~~~~~~~~l~~~ar~~~ 381 (396)
T cd03818 351 --FDPDALAAAVIELLDDPARRARLRRAARRTA 381 (396)
T ss_pred --CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 468999999999999876 344555554433
No 59
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.86 E-value=7.6e-06 Score=79.95 Aligned_cols=81 Identities=12% Similarity=0.176 Sum_probs=61.9
Q ss_pred CCeEeccccchH---HhhccCCccceec----ccCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccC
Q 046326 344 AGMVVPSWAPQV---HILRHPSTGGFLS----HCGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEP 416 (476)
Q Consensus 344 ~~~~~~~~~pq~---~iL~~~~~~~~I~----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~ 416 (476)
.++.+.+++++. .++..+++ +|. -|..+++.||+++|+|+|+.+. ......+ ++.+.|...+.
T Consensus 256 ~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~--~~~~~g~~~~~-- 325 (374)
T cd03801 256 DRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVV--EDGETGLLVPP-- 325 (374)
T ss_pred cceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHh--cCCcceEEeCC--
Confidence 688888999644 47888886 553 2456799999999999998765 3455566 55667777655
Q ss_pred CCCCcCHHHHHHHHHHHhcCCh
Q 046326 417 GKKVIGREEIERVVRLVMEGEE 438 (476)
Q Consensus 417 ~~~~~~~~~l~~ai~~~l~~~~ 438 (476)
.+.+++.++|.+++++++
T Consensus 326 ----~~~~~l~~~i~~~~~~~~ 343 (374)
T cd03801 326 ----GDPEALAEAILRLLDDPE 343 (374)
T ss_pred ----CCHHHHHHHHHHHHcChH
Confidence 458999999999998876
No 60
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.86 E-value=4.3e-06 Score=80.53 Aligned_cols=105 Identities=16% Similarity=0.208 Sum_probs=73.7
Q ss_pred CccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHHHHHHHhh
Q 046326 17 GLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLHAIVEESL 96 (476)
Q Consensus 17 ~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (476)
..-|++=|-.+.++|.++| |+|.+++-+.. ...+.++.+ ++.+..++... ......+.....+..
T Consensus 9 ~p~hvhfFk~~I~eL~~~G-heV~it~R~~~----~~~~LL~~y--g~~y~~iG~~g--------~~~~~Kl~~~~~R~~ 73 (335)
T PF04007_consen 9 HPAHVHFFKNIIRELEKRG-HEVLITARDKD----ETEELLDLY--GIDYIVIGKHG--------DSLYGKLLESIERQY 73 (335)
T ss_pred CchHHHHHHHHHHHHHhCC-CEEEEEEeccc----hHHHHHHHc--CCCeEEEcCCC--------CCHHHHHHHHHHHHH
Confidence 4449999999999999999 99999986532 233444444 89998887422 233333444443333
Q ss_pred cHHHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEeccc
Q 046326 97 SKSLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFVTTS 140 (476)
Q Consensus 97 ~~~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~ 140 (476)
.+..++++. +||++|+-. .+.+..+|..+|+|+|.+.=..
T Consensus 74 --~l~~~~~~~-~pDv~is~~-s~~a~~va~~lgiP~I~f~D~e 113 (335)
T PF04007_consen 74 --KLLKLIKKF-KPDVAISFG-SPEAARVAFGLGIPSIVFNDTE 113 (335)
T ss_pred --HHHHHHHhh-CCCEEEecC-cHHHHHHHHHhCCCeEEEecCc
Confidence 366666777 999999754 5667779999999999987654
No 61
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.85 E-value=4.2e-07 Score=90.18 Aligned_cols=107 Identities=13% Similarity=0.198 Sum_probs=72.2
Q ss_pred CCeEeccccchH---HhhccCCccceecccCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCC
Q 046326 344 AGMVVPSWAPQV---HILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKV 420 (476)
Q Consensus 344 ~~~~~~~~~pq~---~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~ 420 (476)
+++.+.+.+++. .++.++++ +|+-.|. .+.||+++|+|+|.++..++++. + ...|.+..+.
T Consensus 255 ~~v~~~~~~~~~~~~~~l~~ad~--vv~~Sg~-~~~EA~a~g~PvI~~~~~~~~~e----~--~~~g~~~lv~------- 318 (365)
T TIGR00236 255 KRVHLIEPLEYLDFLNLAANSHL--ILTDSGG-VQEEAPSLGKPVLVLRDTTERPE----T--VEAGTNKLVG------- 318 (365)
T ss_pred CCEEEECCCChHHHHHHHHhCCE--EEECChh-HHHHHHHcCCCEEECCCCCCChH----H--HhcCceEEeC-------
Confidence 578877766653 56677775 8887764 47999999999999976565542 2 2346665442
Q ss_pred cCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHH
Q 046326 421 IGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGGSSSDSLASFIKK 473 (476)
Q Consensus 421 ~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 473 (476)
-+++++.+++.+++++++ .+++...-. ....+++++.+.++.+.++
T Consensus 319 ~d~~~i~~ai~~ll~~~~---~~~~~~~~~----~~~g~~~a~~ri~~~l~~~ 364 (365)
T TIGR00236 319 TDKENITKAAKRLLTDPD---EYKKMSNAS----NPYGDGEASERIVEELLNH 364 (365)
T ss_pred CCHHHHHHHHHHHHhChH---HHHHhhhcC----CCCcCchHHHHHHHHHHhh
Confidence 368999999999998876 554433222 2234567777777666554
No 62
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=98.82 E-value=3.4e-05 Score=77.68 Aligned_cols=92 Identities=10% Similarity=0.087 Sum_probs=65.0
Q ss_pred CCeEeccccchH---HhhccCCccceec---ccCc-hHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccC
Q 046326 344 AGMVVPSWAPQV---HILRHPSTGGFLS---HCGW-NSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEP 416 (476)
Q Consensus 344 ~~~~~~~~~pq~---~iL~~~~~~~~I~---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~ 416 (476)
+++.+.+++|+. .+|..+++ +|. +-|+ .++.||+++|+|+|+.... .....+ ++-+.|..++.
T Consensus 283 ~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~----~~~e~i--~~~~~g~~~~~-- 352 (405)
T TIGR03449 283 DRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVG----GLPVAV--ADGETGLLVDG-- 352 (405)
T ss_pred ceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCC----CcHhhh--ccCCceEECCC--
Confidence 578898999864 47888886 543 2333 5899999999999997543 233445 55556776654
Q ss_pred CCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHH
Q 046326 417 GKKVIGREEIERVVRLVMEGEE-GKVMRRRVQEL 449 (476)
Q Consensus 417 ~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l 449 (476)
-+.++++++|.+++++++ .+.+++++++.
T Consensus 353 ----~d~~~la~~i~~~l~~~~~~~~~~~~~~~~ 382 (405)
T TIGR03449 353 ----HDPADWADALARLLDDPRTRIRMGAAAVEH 382 (405)
T ss_pred ----CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 468999999999998766 34455555543
No 63
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.73 E-value=2.9e-05 Score=75.31 Aligned_cols=93 Identities=18% Similarity=0.204 Sum_probs=62.2
Q ss_pred CCeEeccccch-HHhhccCCccceeccc----CchHHHHHHhcCCcEeeccccchhhhhhhhhcceeee-eEEeccccCC
Q 046326 344 AGMVVPSWAPQ-VHILRHPSTGGFLSHC----GWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETG-VAVKPETEPG 417 (476)
Q Consensus 344 ~~~~~~~~~pq-~~iL~~~~~~~~I~Hg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G-~G~~l~~~~~ 417 (476)
.++...++..+ ..++..+++ +|.-. .-+++.||+++|+|+|+.+..+.+. .+ ...| .|..++.
T Consensus 235 ~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~----~~--~~~~~~g~~~~~--- 303 (348)
T cd03820 235 DRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPS----EI--IEDGVNGLLVPN--- 303 (348)
T ss_pred CeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCchH----hh--hccCcceEEeCC---
Confidence 46777777444 358888886 55443 2478999999999999876544332 22 2333 6766654
Q ss_pred CCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHHH
Q 046326 418 KKVIGREEIERVVRLVMEGEE-GKVMRRRVQELK 450 (476)
Q Consensus 418 ~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~ 450 (476)
-+.+++.++|.++++|++ .+.++++++++.
T Consensus 304 ---~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~ 334 (348)
T cd03820 304 ---GDVEALAEALLRLMEDEELRKRMGANARESA 334 (348)
T ss_pred ---CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 468999999999999887 334555544433
No 64
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=98.73 E-value=2.2e-05 Score=77.15 Aligned_cols=90 Identities=13% Similarity=0.107 Sum_probs=62.7
Q ss_pred CCeEeccccchHH---hhccCCccceecc---cC-chHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccC
Q 046326 344 AGMVVPSWAPQVH---ILRHPSTGGFLSH---CG-WNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEP 416 (476)
Q Consensus 344 ~~~~~~~~~pq~~---iL~~~~~~~~I~H---gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~ 416 (476)
+++...+|+++.. ++..+++ +|.- .| .+++.||+++|+|+|+.+.. .....+ .. +.|...+.
T Consensus 262 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~~~~~--~~-~~~~~~~~-- 330 (375)
T cd03821 262 DRVTFTGMLYGEDKAAALADADL--FVLPSHSENFGIVVAEALACGTPVVTTDKV----PWQELI--EY-GCGWVVDD-- 330 (375)
T ss_pred ceEEEcCCCChHHHHHHHhhCCE--EEeccccCCCCcHHHHHHhcCCCEEEcCCC----CHHHHh--hc-CceEEeCC--
Confidence 6788999999543 5788886 4432 22 46899999999999997543 344445 45 77766544
Q ss_pred CCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHH
Q 046326 417 GKKVIGREEIERVVRLVMEGEE-GKVMRRRVQEL 449 (476)
Q Consensus 417 ~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l 449 (476)
+.+++.++|.+++++++ .+.+.+++++.
T Consensus 331 -----~~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 359 (375)
T cd03821 331 -----DVDALAAALRRALELPQRLKAMGENGRAL 359 (375)
T ss_pred -----ChHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 34999999999999875 33455555444
No 65
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=98.72 E-value=3e-05 Score=78.90 Aligned_cols=108 Identities=12% Similarity=0.125 Sum_probs=68.1
Q ss_pred CCeEeccccchHH---hhccC----Cccceeccc---C-chHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEec
Q 046326 344 AGMVVPSWAPQVH---ILRHP----STGGFLSHC---G-WNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKP 412 (476)
Q Consensus 344 ~~~~~~~~~pq~~---iL~~~----~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l 412 (476)
+++...+++++.+ ++..+ ++ ||... | -.++.||+++|+|+|+.... -....+ ++...|+.+
T Consensus 317 ~~V~f~g~~~~~~~~~~~~~a~~~~Dv--~v~pS~~E~fg~~~lEAma~G~PvV~s~~g----g~~eiv--~~~~~G~lv 388 (439)
T TIGR02472 317 GKVAYPKHHRPDDVPELYRLAARSRGI--FVNPALTEPFGLTLLEAAACGLPIVATDDG----GPRDII--ANCRNGLLV 388 (439)
T ss_pred ceEEecCCCCHHHHHHHHHHHhhcCCE--EecccccCCcccHHHHHHHhCCCEEEeCCC----CcHHHh--cCCCcEEEe
Confidence 5677778877654 35544 44 76543 3 35999999999999988653 233444 444457666
Q ss_pred cccCCCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHH
Q 046326 413 ETEPGKKVIGREEIERVVRLVMEGEE-GKVMRRRVQELKESASRELGDGGSSSDSLASFIK 472 (476)
Q Consensus 413 ~~~~~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 472 (476)
+. -+.++++++|.++++|++ ...+.+++++. ..+.-+-+..++++.+
T Consensus 389 ~~------~d~~~la~~i~~ll~~~~~~~~~~~~a~~~-------~~~~fsw~~~~~~~~~ 436 (439)
T TIGR02472 389 DV------LDLEAIASALEDALSDSSQWQLWSRNGIEG-------VRRHYSWDAHVEKYLR 436 (439)
T ss_pred CC------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH-------HHHhCCHHHHHHHHHH
Confidence 55 468999999999999876 33344444332 2223444445555544
No 66
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.71 E-value=1.2e-05 Score=79.00 Aligned_cols=97 Identities=13% Similarity=0.079 Sum_probs=66.4
Q ss_pred CCeEeccccchH---HhhccCCccceec---ccCc-hHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccC
Q 046326 344 AGMVVPSWAPQV---HILRHPSTGGFLS---HCGW-NSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEP 416 (476)
Q Consensus 344 ~~~~~~~~~pq~---~iL~~~~~~~~I~---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~ 416 (476)
.|+...+|+|+. .++..+++..+.+ +-|. .++.||+++|+|+|+....+.+.... .+-+.|.....
T Consensus 244 ~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~-----~~~~~g~~~~~-- 316 (357)
T cd03795 244 DRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVN-----LHGVTGLVVPP-- 316 (357)
T ss_pred ceEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHh-----hCCCceEEeCC--
Confidence 689999999975 4777788733333 2343 47999999999999976554443322 11356665544
Q ss_pred CCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHHHH
Q 046326 417 GKKVIGREEIERVVRLVMEGEE-GKVMRRRVQELKE 451 (476)
Q Consensus 417 ~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~ 451 (476)
-+.+++.++|.++++|++ .+.+++++++..+
T Consensus 317 ----~d~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~ 348 (357)
T cd03795 317 ----GDPAALAEAIRRLLEDPELRERLGEAARERAE 348 (357)
T ss_pred ----CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Confidence 478999999999999876 4445656555443
No 67
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.69 E-value=1.2e-05 Score=77.70 Aligned_cols=327 Identities=15% Similarity=0.142 Sum_probs=178.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhc--CCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHH
Q 046326 9 HVAVLPSPGLGHLIPLLEFAKRLVLN--HGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVT 86 (476)
Q Consensus 9 rIll~~~p~~GHi~P~l~La~~L~~r--G~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (476)
-.+-+-..+-|-++-.+.|.++|+++ + +.+++.+.++ ...+..++. ++..+...-+|. +. .
T Consensus 50 p~vWiHaaSVGEv~a~~pLv~~l~~~~P~-~~ilvTt~T~-Tg~e~a~~~---~~~~v~h~YlP~----D~-------~- 112 (419)
T COG1519 50 PLVWIHAASVGEVLAALPLVRALRERFPD-LRILVTTMTP-TGAERAAAL---FGDSVIHQYLPL----DL-------P- 112 (419)
T ss_pred CeEEEEecchhHHHHHHHHHHHHHHhCCC-CCEEEEecCc-cHHHHHHHH---cCCCeEEEecCc----Cc-------h-
Confidence 35666667899999999999999999 6 7777777543 333333333 221222222221 11 0
Q ss_pred HHHHHHHHhhcHHHHHHHHhcCCCCEEEECCCcchH--HHHHHHcCCCeEEEecccHHHHHHHhhcccccccccCCCCCC
Q 046326 87 RLHAIVEESLSKSLKSVLTELCNPNALVIDLFCTQA--FEICSQLSIPTYSFVTTSVHFFAFITYLPTLDHEVQGEFVDL 164 (476)
Q Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~~--~~~A~~lgIP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 164 (476)
. .++..++.+ +||++|.-..-.|. ..-++..|||.+.+..=-.
T Consensus 113 ----------~-~v~rFl~~~-~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRLS----------------------- 157 (419)
T COG1519 113 ----------I-AVRRFLRKW-RPKLLIIMETELWPNLINELKRRGIPLVLVNARLS----------------------- 157 (419)
T ss_pred ----------H-HHHHHHHhc-CCCEEEEEeccccHHHHHHHHHcCCCEEEEeeeec-----------------------
Confidence 1 567778888 99998853333343 3478899999998653000
Q ss_pred CCCccCCCCCCCCccccCcccccCChhHHHHHHHHhhc-cCCCcEEEEcCccccchhHHHHhhhcccCCCCCCCCeEeec
Q 046326 165 PEPIKIPGCPPVRPEDLLDQVRNRKIDEYKFFLLHVSR-LPLAAGIFLNSWENLEFVPLKAIGEHSFYLQIPTPPINPIG 243 (476)
Q Consensus 165 ~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~p~~~~vG 243 (476)
...+++ |..+....+. +.+-+.++..+=.+-+ ++..+ | .+++..+|
T Consensus 158 --~rS~~~--------------------y~k~~~~~~~~~~~i~li~aQse~D~~-Rf~~L-------G---a~~v~v~G 204 (419)
T COG1519 158 --DRSFAR--------------------YAKLKFLARLLFKNIDLILAQSEEDAQ-RFRSL-------G---AKPVVVTG 204 (419)
T ss_pred --hhhhHH--------------------HHHHHHHHHHHHHhcceeeecCHHHHH-HHHhc-------C---CcceEEec
Confidence 000011 1111111122 2223444444422111 11111 2 14477788
Q ss_pred CCCCCCCCCCCChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHhC--CCceEEEEecCCCCCccccccccC
Q 046326 244 PLIKQDEPLSASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQS--KQRFIWVVRMPSDASASATFFNVG 321 (476)
Q Consensus 244 pl~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~~ 321 (476)
.+=..-.....++.....|-..-.....+.|.-+|+. ...+.+-+...+|.+. +...||+=+.+...
T Consensus 205 NlKfd~~~~~~~~~~~~~~r~~l~~~r~v~iaaSTH~-GEeei~l~~~~~l~~~~~~~llIlVPRHpERf---------- 273 (419)
T COG1519 205 NLKFDIEPPPQLAAELAALRRQLGGHRPVWVAASTHE-GEEEIILDAHQALKKQFPNLLLILVPRHPERF---------- 273 (419)
T ss_pred ceeecCCCChhhHHHHHHHHHhcCCCCceEEEecCCC-chHHHHHHHHHHHHhhCCCceEEEecCChhhH----------
Confidence 7644322211222222222222221014666656642 2334455566666443 35667765443210
Q ss_pred CCCCCCCCCCChhHHHhhhc---------C------CCCeEeccccchH-HhhccCCccc-----eecccCchHHHHHHh
Q 046326 322 SDVNDPKAYLPEGFLQRTRA---------Q------GAGMVVPSWAPQV-HILRHPSTGG-----FLSHCGWNSTLESIC 380 (476)
Q Consensus 322 ~~~~~~~~~lp~~~~~~~~~---------~------~~~~~~~~~~pq~-~iL~~~~~~~-----~I~HgG~~s~~eal~ 380 (476)
....+..+. + .-++++.+-+--. .+++-+++ + |+-+||.| ..|.++
T Consensus 274 -----------~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adi-AFVGGSlv~~GGHN-~LEpa~ 340 (419)
T COG1519 274 -----------KAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADI-AFVGGSLVPIGGHN-PLEPAA 340 (419)
T ss_pred -----------HHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccE-EEECCcccCCCCCC-hhhHHH
Confidence 001111111 0 0234443433222 23333333 3 45689998 789999
Q ss_pred cCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHHH
Q 046326 381 HGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGEE-GKVMRRRVQELKESAS 454 (476)
Q Consensus 381 ~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~ 454 (476)
+|+|+|.=|+..-|.+-++++ ++.|.|+.++. ++.|.+++..+++|+. .++|.+++.++-++.+
T Consensus 341 ~~~pvi~Gp~~~Nf~ei~~~l--~~~ga~~~v~~--------~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~~~~ 405 (419)
T COG1519 341 FGTPVIFGPYTFNFSDIAERL--LQAGAGLQVED--------ADLLAKAVELLLADEDKREAYGRAGLEFLAQNR 405 (419)
T ss_pred cCCCEEeCCccccHHHHHHHH--HhcCCeEEECC--------HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999 99999999854 7889999988888766 5566666666666554
No 68
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.69 E-value=2e-06 Score=85.23 Aligned_cols=134 Identities=15% Similarity=0.112 Sum_probs=82.6
Q ss_pred CcEEEEecCCCCCC-CHHHHHHHHHHHHhCCCc-eEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcC---C
Q 046326 269 DSVLFAVPGSGGTL-TAEQVTEMAWGLEQSKQR-FIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQ---G 343 (476)
Q Consensus 269 ~~vvyvs~GS~~~~-~~~~~~~~~~al~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~---~ 343 (476)
++.|++++|..... ..+.+..++++++..... +++....... . -+.+.+..... .
T Consensus 198 ~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~----------------~----~~~l~~~~~~~~~~~ 257 (363)
T cd03786 198 KKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR----------------T----RPRIREAGLEFLGHH 257 (363)
T ss_pred CCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC----------------h----HHHHHHHHHhhccCC
Confidence 34788888877533 345567777777665322 3333322210 0 02222221110 1
Q ss_pred CCeEeccccchH---HhhccCCccceecccCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCC
Q 046326 344 AGMVVPSWAPQV---HILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKV 420 (476)
Q Consensus 344 ~~~~~~~~~pq~---~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~ 420 (476)
+++.+.+..++. .++..+++ ||+.+| |.+.||+++|+|+|+++.. |. +..+ .+.|++..+..
T Consensus 258 ~~v~~~~~~~~~~~~~l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~--~~~g~~~~~~~------ 322 (363)
T cd03786 258 PNVLLISPLGYLYFLLLLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPET--VESGTNVLVGT------ 322 (363)
T ss_pred CCEEEECCcCHHHHHHHHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchh--hheeeEEecCC------
Confidence 577776655443 45777885 999998 7788999999999998642 22 3344 56677655532
Q ss_pred cCHHHHHHHHHHHhcCCh
Q 046326 421 IGREEIERVVRLVMEGEE 438 (476)
Q Consensus 421 ~~~~~l~~ai~~~l~~~~ 438 (476)
+.+++.++|.++++++.
T Consensus 323 -~~~~i~~~i~~ll~~~~ 339 (363)
T cd03786 323 -DPEAILAAIEKLLSDEF 339 (363)
T ss_pred -CHHHHHHHHHHHhcCch
Confidence 48999999999998875
No 69
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.69 E-value=7e-05 Score=73.37 Aligned_cols=81 Identities=10% Similarity=0.074 Sum_probs=60.5
Q ss_pred CCeEeccccchH---HhhccCCccceec----ccCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccC
Q 046326 344 AGMVVPSWAPQV---HILRHPSTGGFLS----HCGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEP 416 (476)
Q Consensus 344 ~~~~~~~~~pq~---~iL~~~~~~~~I~----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~ 416 (476)
.++.+.+++++. .++..+++ +|. -|.-+++.||+++|+|+|+-+..+ ....+ ++.+.|.....
T Consensus 259 ~~v~~~g~~~~~~~~~~~~~ad~--~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~----~~~~~--~~~~~g~~~~~-- 328 (377)
T cd03798 259 DRVTFLGAVPHEEVPAYYAAADV--FVLPSLREGFGLVLLEAMACGLPVVATDVGG----IPEII--TDGENGLLVPP-- 328 (377)
T ss_pred ceEEEeCCCCHHHHHHHHHhcCe--eecchhhccCChHHHHHHhcCCCEEEecCCC----hHHHh--cCCcceeEECC--
Confidence 688999999875 46777886 442 245578999999999999876533 34455 55566766654
Q ss_pred CCCCcCHHHHHHHHHHHhcCCh
Q 046326 417 GKKVIGREEIERVVRLVMEGEE 438 (476)
Q Consensus 417 ~~~~~~~~~l~~ai~~~l~~~~ 438 (476)
-+.+++.++|.+++++++
T Consensus 329 ----~~~~~l~~~i~~~~~~~~ 346 (377)
T cd03798 329 ----GDPEALAEAILRLLADPW 346 (377)
T ss_pred ----CCHHHHHHHHHHHhcCcH
Confidence 578999999999998875
No 70
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=98.64 E-value=0.00012 Score=71.96 Aligned_cols=96 Identities=10% Similarity=-0.002 Sum_probs=62.5
Q ss_pred CCeEeccccchH-HhhccCCccceec--ccC-chHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCC
Q 046326 344 AGMVVPSWAPQV-HILRHPSTGGFLS--HCG-WNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKK 419 (476)
Q Consensus 344 ~~~~~~~~~pq~-~iL~~~~~~~~I~--HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~ 419 (476)
+++.+.+|.++. .++..+++..+-+ +-| .+++.||+++|+|+|+.-.. .....+ ...+.|..++.
T Consensus 246 ~~v~~~g~~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~----~~~e~i--~~~~~g~~~~~----- 314 (355)
T cd03819 246 DRVTFVGHCSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG----GARETV--RPGETGLLVPP----- 314 (355)
T ss_pred ceEEEcCCcccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC----CcHHHH--hCCCceEEeCC-----
Confidence 578888886543 5788888722222 123 36999999999999987543 233444 44456777654
Q ss_pred CcCHHHHHHHHHHHhc-CCh-hHHHHHHHHHHHH
Q 046326 420 VIGREEIERVVRLVME-GEE-GKVMRRRVQELKE 451 (476)
Q Consensus 420 ~~~~~~l~~ai~~~l~-~~~-~~~~~~~a~~l~~ 451 (476)
-+.+++.++|.+++. +++ ..+++++|++..+
T Consensus 315 -~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 315 -GDAEALAQALDQILSLLPEGRAKMFAKARMCVE 347 (355)
T ss_pred -CCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 478999999976654 444 4446666655544
No 71
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=98.63 E-value=8e-05 Score=74.81 Aligned_cols=78 Identities=13% Similarity=0.107 Sum_probs=53.6
Q ss_pred CCeEeccccchH---HhhccCCccceec---ccCc-hHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccC
Q 046326 344 AGMVVPSWAPQV---HILRHPSTGGFLS---HCGW-NSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEP 416 (476)
Q Consensus 344 ~~~~~~~~~pq~---~iL~~~~~~~~I~---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~ 416 (476)
+++...+|+|+. .++..+++ +|. +-|. .++.||+++|+|+|+.+..+ ....+ ++ |.+ .+..
T Consensus 250 ~~v~~~G~~~~~~~~~~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i--~~-~~~-~~~~-- 317 (398)
T cd03796 250 DRVELLGAVPHERVRDVLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVL--PP-DMI-LLAE-- 317 (398)
T ss_pred CeEEEeCCCCHHHHHHHHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhhe--eC-Cce-eecC--
Confidence 568888999864 47778886 543 2244 49999999999999977643 22344 33 333 2222
Q ss_pred CCCCcCHHHHHHHHHHHhcCC
Q 046326 417 GKKVIGREEIERVVRLVMEGE 437 (476)
Q Consensus 417 ~~~~~~~~~l~~ai~~~l~~~ 437 (476)
.+.+++.+++.+++++.
T Consensus 318 ----~~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 318 ----PDVESIVRKLEEAISIL 334 (398)
T ss_pred ----CCHHHHHHHHHHHHhCh
Confidence 26899999999999764
No 72
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.62 E-value=9.4e-05 Score=72.71 Aligned_cols=107 Identities=13% Similarity=0.191 Sum_probs=68.8
Q ss_pred CCeEeccc-cchH---HhhccCCccceec--c----cCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEecc
Q 046326 344 AGMVVPSW-APQV---HILRHPSTGGFLS--H----CGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPE 413 (476)
Q Consensus 344 ~~~~~~~~-~pq~---~iL~~~~~~~~I~--H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~ 413 (476)
+++...+. +|+. .++..+++ +|. + |-.+++.||+++|+|+|+.+..+ ...+ ...+.|..+.
T Consensus 247 ~~v~~~~~~~~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i--~~~~~g~~~~ 317 (366)
T cd03822 247 DRVIFINRYLPDEELPELFSAADV--VVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEV--LDGGTGLLVP 317 (366)
T ss_pred CcEEEecCcCCHHHHHHHHhhcCE--EEecccccccccchHHHHHHHcCCCEEecCCCC-----hhee--eeCCCcEEEc
Confidence 57776654 8764 47777886 442 2 33468999999999999987644 3334 5556777665
Q ss_pred ccCCCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHH
Q 046326 414 TEPGKKVIGREEIERVVRLVMEGEE-GKVMRRRVQELKESASRELGDGGSSSDSLASFIKK 473 (476)
Q Consensus 414 ~~~~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 473 (476)
. -+.+++.+++.+++++++ ...+++++++..+ + -+-+..++++.+-
T Consensus 318 ~------~d~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~-------~-~s~~~~~~~~~~~ 364 (366)
T cd03822 318 P------GDPAALAEAIRRLLADPELAQALRARAREYAR-------A-MSWERVAERYLRL 364 (366)
T ss_pred C------CCHHHHHHHHHHHHcChHHHHHHHHHHHHHHh-------h-CCHHHHHHHHHHH
Confidence 5 358999999999999865 3334444444332 2 4444455555543
No 73
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=98.61 E-value=8.9e-06 Score=79.02 Aligned_cols=101 Identities=19% Similarity=0.206 Sum_probs=68.0
Q ss_pred HHhhccCCccceecccCchHHHHHHhcCCcEeecccc--chhhhhhhhhcce---eeeeEEec-c----c----cCCCCC
Q 046326 355 VHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLY--AEQRMNAAMLTAE---ETGVAVKP-E----T----EPGKKV 420 (476)
Q Consensus 355 ~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~--~DQ~~na~~~~~~---~~G~G~~l-~----~----~~~~~~ 420 (476)
..++..+++ +|+-+|..|+ |+..+|+|||+ ++. .-|+.||+++ . ..|+...+ + + +=-.++
T Consensus 230 ~~~m~~aDl--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~l--v~~~~igL~Nii~~~~~~~~vvPEllQ~~ 303 (347)
T PRK14089 230 HKALLEAEF--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMF--VKLKHIGLANIFFDFLGKEPLHPELLQEF 303 (347)
T ss_pred HHHHHhhhH--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHH--HcCCeeehHHHhcCCCcccccCchhhccc
Confidence 468888885 9999999999 99999999999 554 4689999999 7 67766444 1 1 001256
Q ss_pred cCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCCChHHHHHHH
Q 046326 421 IGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGGSSSDSLASF 470 (476)
Q Consensus 421 ~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 470 (476)
.|+++|.+++.+. ..+ .+++...++.+. ++ ++++.+..+.+
T Consensus 304 ~t~~~la~~i~~~-~~~---~~~~~~~~l~~~----l~-~~a~~~~A~~i 344 (347)
T PRK14089 304 VTVENLLKAYKEM-DRE---KFFKKSKELREY----LK-HGSAKNVAKIL 344 (347)
T ss_pred CCHHHHHHHHHHH-HHH---HHHHHHHHHHHH----hc-CCHHHHHHHHH
Confidence 8999999999872 111 244444444444 33 35555554433
No 74
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=98.60 E-value=3.6e-05 Score=75.73 Aligned_cols=109 Identities=7% Similarity=0.034 Sum_probs=66.2
Q ss_pred CCeEeccccch-HHhhccCCccceeccc----CchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCC
Q 046326 344 AGMVVPSWAPQ-VHILRHPSTGGFLSHC----GWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGK 418 (476)
Q Consensus 344 ~~~~~~~~~pq-~~iL~~~~~~~~I~Hg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~ 418 (476)
+++...++..+ ..++..+++ +|.-. ..+++.||+++|+|+|+. |...+...+ ++. |..+..
T Consensus 245 ~~v~~~g~~~~~~~~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~i--~~~--g~~~~~---- 310 (360)
T cd04951 245 NRVKLLGLRDDIAAYYNAADL--FVLSSAWEGFGLVVAEAMACELPVVAT----DAGGVREVV--GDS--GLIVPI---- 310 (360)
T ss_pred CcEEEecccccHHHHHHhhce--EEecccccCCChHHHHHHHcCCCEEEe----cCCChhhEe--cCC--ceEeCC----
Confidence 57888887765 357888886 44432 247899999999999974 444555556 553 433333
Q ss_pred CCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHh
Q 046326 419 KVIGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGGSSSDSLASFIKKC 474 (476)
Q Consensus 419 ~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 474 (476)
-+.+++.+++.++++++. .+++...+-++.+ .+.-+-+...+++.+-+
T Consensus 311 --~~~~~~~~~i~~ll~~~~--~~~~~~~~~~~~~----~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 311 --SDPEALANKIDEILKMSG--EERDIIGARRERI----VKKFSINSIVQQWLTLY 358 (360)
T ss_pred --CCHHHHHHHHHHHHhCCH--HHHHHHHHHHHHH----HHhcCHHHHHHHHHHHh
Confidence 468899999999985432 1333222222222 22344455555555544
No 75
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=98.59 E-value=5.4e-05 Score=74.31 Aligned_cols=92 Identities=13% Similarity=0.154 Sum_probs=64.1
Q ss_pred CCeEeccccchH---HhhccCCccceecc----------cCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEE
Q 046326 344 AGMVVPSWAPQV---HILRHPSTGGFLSH----------CGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAV 410 (476)
Q Consensus 344 ~~~~~~~~~pq~---~iL~~~~~~~~I~H----------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~ 410 (476)
+++.+.+++|+. .++.++++ +|.- |.-+++.||+++|+|+|+.+..+ ....+ +....|.
T Consensus 236 ~~v~~~g~~~~~~l~~~~~~adi--~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i--~~~~~g~ 307 (355)
T cd03799 236 DRVTLLGAKSQEEVRELLRAADL--FVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELV--EDGETGL 307 (355)
T ss_pred CeEEECCcCChHHHHHHHHhCCE--EEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhh--hCCCceE
Confidence 689999999754 47777886 4442 23478999999999999976532 22344 4444677
Q ss_pred eccccCCCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHH
Q 046326 411 KPETEPGKKVIGREEIERVVRLVMEGEE-GKVMRRRVQEL 449 (476)
Q Consensus 411 ~l~~~~~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l 449 (476)
.+.. -+.+++.++|.++++++. ...+++++++.
T Consensus 308 ~~~~------~~~~~l~~~i~~~~~~~~~~~~~~~~a~~~ 341 (355)
T cd03799 308 LVPP------GDPEALADAIERLLDDPELRREMGEAGRAR 341 (355)
T ss_pred EeCC------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 6654 378999999999998876 34455555443
No 76
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=98.55 E-value=0.0004 Score=67.80 Aligned_cols=79 Identities=14% Similarity=0.189 Sum_probs=55.7
Q ss_pred CCeEeccccch-HHhhccCCccceecccC----chHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCC
Q 046326 344 AGMVVPSWAPQ-VHILRHPSTGGFLSHCG----WNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGK 418 (476)
Q Consensus 344 ~~~~~~~~~pq-~~iL~~~~~~~~I~HgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~ 418 (476)
.++...+...+ ..++..+++ +|..+. .+++.||+++|+|+|+... ..+...+ .+ .|..++.
T Consensus 251 ~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~----~~~~e~~--~~--~g~~~~~---- 316 (365)
T cd03807 251 DKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATDV----GDNAELV--GD--TGFLVPP---- 316 (365)
T ss_pred ceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcCC----CChHHHh--hc--CCEEeCC----
Confidence 46666665544 358888886 665443 3799999999999998543 3445555 44 5555544
Q ss_pred CCcCHHHHHHHHHHHhcCCh
Q 046326 419 KVIGREEIERVVRLVMEGEE 438 (476)
Q Consensus 419 ~~~~~~~l~~ai~~~l~~~~ 438 (476)
-+.+++.+++.+++++++
T Consensus 317 --~~~~~l~~~i~~l~~~~~ 334 (365)
T cd03807 317 --GDPEALAEAIEALLADPA 334 (365)
T ss_pred --CCHHHHHHHHHHHHhChH
Confidence 358999999999998865
No 77
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=98.53 E-value=9.5e-05 Score=71.77 Aligned_cols=81 Identities=14% Similarity=0.084 Sum_probs=55.9
Q ss_pred CCeEeccccchH-HhhccCCccceecc----cCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCC
Q 046326 344 AGMVVPSWAPQV-HILRHPSTGGFLSH----CGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGK 418 (476)
Q Consensus 344 ~~~~~~~~~pq~-~iL~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~ 418 (476)
+++...++.++. .++..+++ +|.- |.-+++.||+++|+|+|+.... .....+ ++.+.|...+.
T Consensus 246 ~~v~~~g~~~~~~~~~~~~d~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i--~~~~~g~~~~~---- 313 (353)
T cd03811 246 DRVHFLGFQSNPYPYLKAADL--FVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREIL--EDGENGLLVPV---- 313 (353)
T ss_pred ccEEEecccCCHHHHHHhCCE--EEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHh--cCCCceEEECC----
Confidence 578888887764 58888886 5532 3346899999999999986543 445566 66677877755
Q ss_pred CCcCHHHH---HHHHHHHhcCCh
Q 046326 419 KVIGREEI---ERVVRLVMEGEE 438 (476)
Q Consensus 419 ~~~~~~~l---~~ai~~~l~~~~ 438 (476)
-+.+.+ .+++.+++.+++
T Consensus 314 --~~~~~~~~~~~~i~~~~~~~~ 334 (353)
T cd03811 314 --GDEAALAAAALALLDLLLDPE 334 (353)
T ss_pred --CCHHHHHHHHHHHHhccCChH
Confidence 456666 556666666655
No 78
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=98.50 E-value=0.00018 Score=72.00 Aligned_cols=91 Identities=13% Similarity=0.070 Sum_probs=63.0
Q ss_pred CCeEeccccchH---HhhccCCccceecc---cC-chHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccC
Q 046326 344 AGMVVPSWAPQV---HILRHPSTGGFLSH---CG-WNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEP 416 (476)
Q Consensus 344 ~~~~~~~~~pq~---~iL~~~~~~~~I~H---gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~ 416 (476)
+++.+.+++|+. .++..+++ ++.. -| -.++.||+++|+|+|+.-..+ ....+ ...+.|..++
T Consensus 280 ~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i--~~~~~g~~~~--- 348 (392)
T cd03805 280 DQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETV--VDGETGFLCE--- 348 (392)
T ss_pred ceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHh--ccCCceEEeC---
Confidence 689999999876 46777886 5432 22 257899999999999974432 33345 4445565542
Q ss_pred CCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHH
Q 046326 417 GKKVIGREEIERVVRLVMEGEE-GKVMRRRVQEL 449 (476)
Q Consensus 417 ~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l 449 (476)
.+.++++++|.+++++++ ...+.+++++.
T Consensus 349 ----~~~~~~a~~i~~l~~~~~~~~~~~~~a~~~ 378 (392)
T cd03805 349 ----PTPEEFAEAMLKLANDPDLADRMGAAGRKR 378 (392)
T ss_pred ----CCHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 268999999999999876 44466665554
No 79
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.48 E-value=0.00014 Score=71.93 Aligned_cols=92 Identities=13% Similarity=0.092 Sum_probs=66.4
Q ss_pred CCeEeccccchH---HhhccCCccceecc----------cCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEE
Q 046326 344 AGMVVPSWAPQV---HILRHPSTGGFLSH----------CGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAV 410 (476)
Q Consensus 344 ~~~~~~~~~pq~---~iL~~~~~~~~I~H----------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~ 410 (476)
.++.+.+++|+. .++..+++ +|.. |-.+++.||+++|+|+|+-+.. .+...+ .+.+.|.
T Consensus 245 ~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~----~~~e~i--~~~~~g~ 316 (367)
T cd05844 245 GRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHG----GIPEAV--EDGETGL 316 (367)
T ss_pred CeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCC----Cchhhe--ecCCeeE
Confidence 678888999865 45888886 5432 2357999999999999987664 355566 6667787
Q ss_pred eccccCCCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHH
Q 046326 411 KPETEPGKKVIGREEIERVVRLVMEGEE-GKVMRRRVQEL 449 (476)
Q Consensus 411 ~l~~~~~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l 449 (476)
.++. -+.+++.++|.++++|++ ...+++++++.
T Consensus 317 ~~~~------~d~~~l~~~i~~l~~~~~~~~~~~~~a~~~ 350 (367)
T cd05844 317 LVPE------GDVAALAAALGRLLADPDLRARMGAAGRRR 350 (367)
T ss_pred EECC------CCHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 7654 467999999999999876 33455555443
No 80
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=98.48 E-value=0.00023 Score=69.25 Aligned_cols=105 Identities=13% Similarity=0.091 Sum_probs=64.7
Q ss_pred CCeEeccccchH---HhhccCCccceec--ccCc-hHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCC
Q 046326 344 AGMVVPSWAPQV---HILRHPSTGGFLS--HCGW-NSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPG 417 (476)
Q Consensus 344 ~~~~~~~~~pq~---~iL~~~~~~~~I~--HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~ 417 (476)
+++...+++++. .+++.+++..+-+ +-|+ .++.||+++|+|+|+.... .+...+ ++-..|... .
T Consensus 224 ~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~----~~~e~i--~~~~~g~l~-~--- 293 (335)
T cd03802 224 PDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRG----AVPEVV--EDGVTGFLV-D--- 293 (335)
T ss_pred CcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCC----Cchhhe--eCCCcEEEe-C---
Confidence 789999999875 4677888622222 2343 5899999999999987653 233334 332245544 2
Q ss_pred CCCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHh
Q 046326 418 KKVIGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGGSSSDSLASFIKKC 474 (476)
Q Consensus 418 ~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 474 (476)
. .+++.+++.+++... ++++++... +.-+-+..++++++-+
T Consensus 294 --~--~~~l~~~l~~l~~~~-----~~~~~~~~~-------~~~s~~~~~~~~~~~y 334 (335)
T cd03802 294 --S--VEELAAAVARADRLD-----RAACRRRAE-------RRFSAARMVDDYLALY 334 (335)
T ss_pred --C--HHHHHHHHHHHhccH-----HHHHHHHHH-------HhCCHHHHHHHHHHHh
Confidence 2 899999999886532 223333222 2455556666665543
No 81
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=98.41 E-value=0.00013 Score=72.30 Aligned_cols=94 Identities=15% Similarity=0.181 Sum_probs=62.0
Q ss_pred CCeEeccccch--H---HhhccCCccceecc----cCchHHHHHHhcCCcEeecc-ccchhhhhhhhhcceeeeeEEecc
Q 046326 344 AGMVVPSWAPQ--V---HILRHPSTGGFLSH----CGWNSTLESICHGVPMIAWP-LYAEQRMNAAMLTAEETGVAVKPE 413 (476)
Q Consensus 344 ~~~~~~~~~pq--~---~iL~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P-~~~DQ~~na~~~~~~~~G~G~~l~ 413 (476)
+++.+.+|+++ . ..+..+++ +|.. |--.++.||+++|+|+|+.- ..+ ....+ ++...|..++
T Consensus 236 ~~v~f~G~~~~~~~~~~~~~~~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv--~~~~~G~lv~ 307 (359)
T PRK09922 236 QRIIWHGWQSQPWEVVQQKIKNVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDII--KPGLNGELYT 307 (359)
T ss_pred CeEEEecccCCcHHHHHHHHhcCcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHc--cCCCceEEEC
Confidence 57888898754 2 23445665 5532 22479999999999999875 322 22344 4545676665
Q ss_pred ccCCCCCcCHHHHHHHHHHHhcCCh---hHHHHHHHHHHHH
Q 046326 414 TEPGKKVIGREEIERVVRLVMEGEE---GKVMRRRVQELKE 451 (476)
Q Consensus 414 ~~~~~~~~~~~~l~~ai~~~l~~~~---~~~~~~~a~~l~~ 451 (476)
. -+.+++.++|.++++|++ ...++++++++..
T Consensus 308 ~------~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~ 342 (359)
T PRK09922 308 P------GNIDEFVGKLNKVISGEVKYQHDAIPNSIERFYE 342 (359)
T ss_pred C------CCHHHHHHHHHHHHhCcccCCHHHHHHHHHHhhH
Confidence 4 489999999999999886 2334444444444
No 82
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.40 E-value=0.0013 Score=65.32 Aligned_cols=110 Identities=13% Similarity=0.100 Sum_probs=69.4
Q ss_pred CCeEeccccch-HHhhccCCcccee--cc--cCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCC
Q 046326 344 AGMVVPSWAPQ-VHILRHPSTGGFL--SH--CGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGK 418 (476)
Q Consensus 344 ~~~~~~~~~pq-~~iL~~~~~~~~I--~H--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~ 418 (476)
.++.+.++..+ ..++..+++ +| ++ |--+++.||+++|+|+|+....+ +...+ ++-..|..++.
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~i--~~~~~g~~~~~---- 322 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVGG----NPELV--QHGVTGALVPP---- 322 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHHh--cCCCceEEeCC----
Confidence 34555565544 368888886 55 32 33579999999999999976532 44445 45455766654
Q ss_pred CCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHh
Q 046326 419 KVIGREEIERVVRLVMEGEE-GKVMRRRVQELKESASRELGDGGSSSDSLASFIKKC 474 (476)
Q Consensus 419 ~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 474 (476)
-+.++++++|.+++++++ ...+.+++++.. .+.-+.+..++++++-+
T Consensus 323 --~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~-------~~~fs~~~~~~~~~~~y 370 (374)
T TIGR03088 323 --GDAVALARALQPYVSDPAARRAHGAAGRARA-------EQQFSINAMVAAYAGLY 370 (374)
T ss_pred --CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-------HHhCCHHHHHHHHHHHH
Confidence 467899999999998765 233444444332 22445555555555543
No 83
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=98.39 E-value=0.00037 Score=68.50 Aligned_cols=80 Identities=13% Similarity=0.028 Sum_probs=57.5
Q ss_pred CCeEeccccch-HHhhccCCccceecc----cCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCC
Q 046326 344 AGMVVPSWAPQ-VHILRHPSTGGFLSH----CGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGK 418 (476)
Q Consensus 344 ~~~~~~~~~pq-~~iL~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~ 418 (476)
+++...++..+ ..++..+++ +|.- |--+++.||+++|+|+|+....+ ....+ +. +.|.....
T Consensus 249 ~~v~~~g~~~~~~~~~~~adi--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i--~~-~~~~~~~~---- 315 (358)
T cd03812 249 DKVIFLGVRNDVPELLQAMDV--FLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDL--TD-LVKFLSLD---- 315 (358)
T ss_pred CcEEEecccCCHHHHHHhcCE--EEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhh--cc-CccEEeCC----
Confidence 57888887555 458888886 4432 34579999999999999876544 33344 44 55555433
Q ss_pred CCcCHHHHHHHHHHHhcCCh
Q 046326 419 KVIGREEIERVVRLVMEGEE 438 (476)
Q Consensus 419 ~~~~~~~l~~ai~~~l~~~~ 438 (476)
-++++++++|.++++|++
T Consensus 316 --~~~~~~a~~i~~l~~~~~ 333 (358)
T cd03812 316 --ESPEIWAEEILKLKSEDR 333 (358)
T ss_pred --CCHHHHHHHHHHHHhCcc
Confidence 358999999999999987
No 84
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.36 E-value=0.00058 Score=67.23 Aligned_cols=106 Identities=16% Similarity=0.189 Sum_probs=63.8
Q ss_pred CCeEeccccchHH---hhccCCccceeccc----Cc-hHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEecccc
Q 046326 344 AGMVVPSWAPQVH---ILRHPSTGGFLSHC----GW-NSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETE 415 (476)
Q Consensus 344 ~~~~~~~~~pq~~---iL~~~~~~~~I~Hg----G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~ 415 (476)
+++...+++++.. ++..+++ ++.+. |. +++.||+++|+|+|+....+ +...+ +. -|.....
T Consensus 248 ~~V~~~g~~~~~~~~~~~~~ad~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~----~~e~~--~~--~g~~~~~- 316 (363)
T cd04955 248 PRIIFVGPIYDQELLELLRYAAL--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPF----NREVL--GD--KAIYFKV- 316 (363)
T ss_pred CcEEEccccChHHHHHHHHhCCE--EEeCCccCCCCChHHHHHHHcCCCEEEecCCc----cceee--cC--CeeEecC-
Confidence 6899999998864 5556665 44432 32 57999999999999875432 22233 33 2333322
Q ss_pred CCCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHh
Q 046326 416 PGKKVIGREEIERVVRLVMEGEE-GKVMRRRVQELKESASRELGDGGSSSDSLASFIKKC 474 (476)
Q Consensus 416 ~~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 474 (476)
. +.+.++|.+++++++ ...+.+++++ ...+.-+-+...+++++-+
T Consensus 317 ---~----~~l~~~i~~l~~~~~~~~~~~~~~~~-------~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 317 ---G----DDLASLLEELEADPEEVSAMAKAARE-------RIREKYTWEKIADQYEELY 362 (363)
T ss_pred ---c----hHHHHHHHHHHhCHHHHHHHHHHHHH-------HHHHhCCHHHHHHHHHHHh
Confidence 1 119999999998865 2223333332 2223455566666666654
No 85
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=98.27 E-value=0.0037 Score=66.54 Aligned_cols=112 Identities=13% Similarity=0.148 Sum_probs=72.9
Q ss_pred CCeEeccccchH-HhhccCCccceec---ccCc-hHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCC
Q 046326 344 AGMVVPSWAPQV-HILRHPSTGGFLS---HCGW-NSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGK 418 (476)
Q Consensus 344 ~~~~~~~~~pq~-~iL~~~~~~~~I~---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~ 418 (476)
++|.+.+|.++. .+|..+++ ||. +.|+ +++.||+++|+|+|+.... -....+ ++-.-|+.++.
T Consensus 574 ~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV--~dg~~GlLv~~---- 641 (694)
T PRK15179 574 ERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAV--QEGVTGLTLPA---- 641 (694)
T ss_pred CcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHc--cCCCCEEEeCC----
Confidence 678888998764 47888886 553 4554 7899999999999997653 233445 55446877776
Q ss_pred CCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHh
Q 046326 419 KVIGREEIERVVRLVMEGEE-GKVMRRRVQELKESASRELGDGGSSSDSLASFIKKC 474 (476)
Q Consensus 419 ~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 474 (476)
++.+.+++.+++.+++.+.. -..+++++++... +.-+-...++++++-+
T Consensus 642 ~d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a~-------~~FS~~~~~~~~~~lY 691 (694)
T PRK15179 642 DTVTAPDVAEALARIHDMCAADPGIARKAADWAS-------ARFSLNQMIASTVRCY 691 (694)
T ss_pred CCCChHHHHHHHHHHHhChhccHHHHHHHHHHHH-------HhCCHHHHHHHHHHHh
Confidence 56777788888877765322 1226665554432 2345555566655543
No 86
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.27 E-value=0.00056 Score=68.65 Aligned_cols=107 Identities=16% Similarity=0.167 Sum_probs=69.9
Q ss_pred CCeEeccccchH-HhhccCCcccee--cc--cCc-hHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCC
Q 046326 344 AGMVVPSWAPQV-HILRHPSTGGFL--SH--CGW-NSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPG 417 (476)
Q Consensus 344 ~~~~~~~~~pq~-~iL~~~~~~~~I--~H--gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~ 417 (476)
+++.+.+++++. .++.++++ +| ++ .|. +.+.||+++|+|+|+.+...+. .. +..|.|+.+.
T Consensus 280 ~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~-----i~--~~~~~g~lv~---- 346 (397)
T TIGR03087 280 PGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEG-----ID--ALPGAELLVA---- 346 (397)
T ss_pred CCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCccccc-----cc--ccCCcceEeC----
Confidence 689899999875 57888887 54 32 354 4699999999999998753221 11 2335565542
Q ss_pred CCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHH
Q 046326 418 KKVIGREEIERVVRLVMEGEE-GKVMRRRVQELKESASRELGDGGSSSDSLASFIKK 473 (476)
Q Consensus 418 ~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 473 (476)
-+.++++++|.++++|++ .+.+.+++++..+ +.-+-+..++++.+-
T Consensus 347 ---~~~~~la~ai~~ll~~~~~~~~~~~~ar~~v~-------~~fsw~~~~~~~~~~ 393 (397)
T TIGR03087 347 ---ADPADFAAAILALLANPAEREELGQAARRRVL-------QHYHWPRNLARLDAL 393 (397)
T ss_pred ---CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH-------HhCCHHHHHHHHHHH
Confidence 368999999999998876 3445555554432 234444555555443
No 87
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=98.23 E-value=0.00037 Score=68.40 Aligned_cols=88 Identities=15% Similarity=0.187 Sum_probs=58.5
Q ss_pred CCeEeccccchH---HhhccCCccceecc----cCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccC
Q 046326 344 AGMVVPSWAPQV---HILRHPSTGGFLSH----CGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEP 416 (476)
Q Consensus 344 ~~~~~~~~~pq~---~iL~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~ 416 (476)
+++...+++|+. .++..+++ +|.- |..+++.||+++|+|+|+.... .....+ .+ .|..+..
T Consensus 253 ~~v~~~g~~~~~~~~~~~~~~d~--~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~----~~~e~~--~~--~~~~~~~-- 320 (365)
T cd03809 253 DRVRFLGYVSDEELAALYRGARA--FVFPSLYEGFGLPVLEAMACGTPVIASNIS----SLPEVA--GD--AALYFDP-- 320 (365)
T ss_pred CeEEECCCCChhHHHHHHhhhhh--hcccchhccCCCCHHHHhcCCCcEEecCCC----Ccccee--cC--ceeeeCC--
Confidence 689999999875 46777886 3322 2346899999999999986442 222223 22 2444443
Q ss_pred CCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHH
Q 046326 417 GKKVIGREEIERVVRLVMEGEE-GKVMRRRVQ 447 (476)
Q Consensus 417 ~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~ 447 (476)
-+.+++.++|.++++|++ ...+.++++
T Consensus 321 ----~~~~~~~~~i~~l~~~~~~~~~~~~~~~ 348 (365)
T cd03809 321 ----LDPEALAAAIERLLEDPALREELRERGL 348 (365)
T ss_pred ----CCHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 378999999999998887 333444443
No 88
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=98.20 E-value=0.0031 Score=62.93 Aligned_cols=114 Identities=12% Similarity=0.115 Sum_probs=68.2
Q ss_pred eE-eccccchH---HhhccCCccceecc----cCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCC
Q 046326 346 MV-VPSWAPQV---HILRHPSTGGFLSH----CGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPG 417 (476)
Q Consensus 346 ~~-~~~~~pq~---~iL~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~ 417 (476)
+. +.+++++. .++..+++ +|.- +...++.||+++|+|+|+.... .....+ +..+.|..++.++.
T Consensus 262 v~~~~~~~~~~~~~~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~~~e~i--~~~~~G~~~~~~~~ 333 (388)
T TIGR02149 262 IIWINKMLPKEELVELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASATG----GIPEVV--VDGETGFLVPPDNS 333 (388)
T ss_pred eEEecCCCCHHHHHHHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCCC----CHHHHh--hCCCceEEcCCCCC
Confidence 44 34567654 46888886 5542 2235789999999999997543 344555 55566777766100
Q ss_pred CCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHh
Q 046326 418 KKVIGREEIERVVRLVMEGEE-GKVMRRRVQELKESASRELGDGGSSSDSLASFIKKC 474 (476)
Q Consensus 418 ~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 474 (476)
...-..+++.++|.++++|++ .+.+.+++++...+ .-+.+...+++++.+
T Consensus 334 ~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~-------~~s~~~~~~~~~~~y 384 (388)
T TIGR02149 334 DADGFQAELAKAINILLADPELAKKMGIAGRKRAEE-------EFSWGSIAKKTVEMY 384 (388)
T ss_pred cccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH-------hCCHHHHHHHHHHHH
Confidence 011123899999999998876 34455555443322 344445555555544
No 89
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=98.19 E-value=0.0027 Score=69.53 Aligned_cols=95 Identities=15% Similarity=0.173 Sum_probs=62.6
Q ss_pred CCeEeccccchHH---hhccCC--ccceecc---cCc-hHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccc
Q 046326 344 AGMVVPSWAPQVH---ILRHPS--TGGFLSH---CGW-NSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPET 414 (476)
Q Consensus 344 ~~~~~~~~~pq~~---iL~~~~--~~~~I~H---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~ 414 (476)
++|.+.+++++.. ++..++ ..+||.- =|+ .++.||+++|+|+|+....+ ....+ +...-|+.++.
T Consensus 548 g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII--~~g~nGlLVdP 621 (1050)
T TIGR02468 548 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIH--RVLDNGLLVDP 621 (1050)
T ss_pred CeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHh--ccCCcEEEECC
Confidence 5677778887754 454442 1136654 243 68999999999999986533 22233 33345666655
Q ss_pred cCCCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHHH
Q 046326 415 EPGKKVIGREEIERVVRLVMEGEE-GKVMRRRVQELK 450 (476)
Q Consensus 415 ~~~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~ 450 (476)
-+.++|+++|.++++|++ ...|.+++++..
T Consensus 622 ------~D~eaLA~AL~~LL~Dpelr~~m~~~gr~~v 652 (1050)
T TIGR02468 622 ------HDQQAIADALLKLVADKQLWAECRQNGLKNI 652 (1050)
T ss_pred ------CCHHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Confidence 568899999999999887 445666655543
No 90
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.19 E-value=0.0007 Score=69.47 Aligned_cols=201 Identities=15% Similarity=0.173 Sum_probs=103.3
Q ss_pred CCeEeec-CCCCCCCCCCCChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHH--hC--CCceEEEEecCCCC
Q 046326 237 PPINPIG-PLIKQDEPLSASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLE--QS--KQRFIWVVRMPSDA 311 (476)
Q Consensus 237 p~~~~vG-pl~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~--~~--~~~~i~~~~~~~~~ 311 (476)
-++.||| |+...... ....++..+-+.-.+++++|-+-.||-.+-=...+..++++.+ .. +.+|+.......
T Consensus 381 v~v~yVGHPL~d~i~~-~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~~l~fvvp~a~~~-- 457 (608)
T PRK01021 381 LRTVYLGHPLVETISS-FSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLASTHQLLVSSANPK-- 457 (608)
T ss_pred CCeEEECCcHHhhccc-CCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhccCeEEEEecCchh--
Confidence 4689999 66544221 1223333444433344568999999985322233334555554 32 345655321110
Q ss_pred CccccccccCCCCCCCCCCCChhHHHhhhcCCCC---eEeccccchHHhhccCCccceecccCchHHHHHHhcCCcEeec
Q 046326 312 SASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAG---MVVPSWAPQVHILRHPSTGGFLSHCGWNSTLESICHGVPMIAW 388 (476)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~---~~~~~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 388 (476)
..+.+.+.... .+ +.+..--....++..++. .+.-+| ..|.|+..+|+||+++
T Consensus 458 -------------------~~~~i~~~~~~--~~~~~~~ii~~~~~~~~m~aaD~--aLaaSG-TaTLEaAL~g~PmVV~ 513 (608)
T PRK01021 458 -------------------YDHLILEVLQQ--EGCLHSHIVPSQFRYELMRECDC--ALAKCG-TIVLETALNQTPTIVT 513 (608)
T ss_pred -------------------hHHHHHHHHhh--cCCCCeEEecCcchHHHHHhcCe--eeecCC-HHHHHHHHhCCCEEEE
Confidence 01222222221 22 122110012467888886 555555 4578999999999986
Q ss_pred ccc-chhhhhhhhhccee-----ee-----eEEecccc--CCCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHHH
Q 046326 389 PLY-AEQRMNAAMLTAEE-----TG-----VAVKPETE--PGKKVIGREEIERVVRLVMEGEE-GKVMRRRVQELKESAS 454 (476)
Q Consensus 389 P~~-~DQ~~na~~~~~~~-----~G-----~G~~l~~~--~~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~ 454 (476)
=-. .=-+.-|+++ .+ .+ +|..+-.| .+.++.|++++.+++ ++|.|++ .+.+++..+++.+.
T Consensus 514 YK~s~Lty~Iak~L--vki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l~~lr~~-- 588 (608)
T PRK01021 514 CQLRPFDTFLAKYI--FKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDACRDLYQA-- 588 (608)
T ss_pred EecCHHHHHHHHHH--HhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHH--
Confidence 221 1123345555 33 12 12222111 112578999999997 8888776 33455555555544
Q ss_pred HHhccCCChHHHHHHHH
Q 046326 455 RELGDGGSSSDSLASFI 471 (476)
Q Consensus 455 ~~~~~~g~~~~~~~~~~ 471 (476)
+.+|-++-+..-.++
T Consensus 589 --Lg~~~~~~~~~~~~~ 603 (608)
T PRK01021 589 --MNESASTMKECLSLI 603 (608)
T ss_pred --hcCCCCCHHHHHHHH
Confidence 456666666554443
No 91
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.11 E-value=1.1e-05 Score=66.10 Aligned_cols=113 Identities=19% Similarity=0.232 Sum_probs=74.4
Q ss_pred EEEEecCCCCCCCHHHH-----HHHHHHHHhCCC-ceEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCCC
Q 046326 271 VLFAVPGSGGTLTAEQV-----TEMAWGLEQSKQ-RFIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGA 344 (476)
Q Consensus 271 vvyvs~GS~~~~~~~~~-----~~~~~al~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~ 344 (476)
.+||+-||.... +.+ .+..+.|.+.|. +.|..+|.+.. ..|+...+..+..+-
T Consensus 5 ~vFVTVGtT~Fd--~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~-------------------~~~d~~~~~~k~~gl 63 (170)
T KOG3349|consen 5 TVFVTVGTTSFD--DLISCVLSEEFLQELQKRGFTKLIIQIGRGQP-------------------FFGDPIDLIRKNGGL 63 (170)
T ss_pred EEEEEeccccHH--HHHHHHcCHHHHHHHHHcCccEEEEEecCCcc-------------------CCCCHHHhhcccCCe
Confidence 799999998621 222 224556666775 67777776522 011222211122002
Q ss_pred CeEeccccch-HHhhccCCccceecccCchHHHHHHhcCCcEeeccc----cchhhhhhhhhcceeeee
Q 046326 345 GMVVPSWAPQ-VHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPL----YAEQRMNAAMLTAEETGV 408 (476)
Q Consensus 345 ~~~~~~~~pq-~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~----~~DQ~~na~~~~~~~~G~ 408 (476)
.+...+|.|- ....+.+++ +|+|+|+||+.|.|..|+|.|+++- -.+|-.-|..+ ++.|-
T Consensus 64 ~id~y~f~psl~e~I~~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL--~~egy 128 (170)
T KOG3349|consen 64 TIDGYDFSPSLTEDIRSADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQL--AEEGY 128 (170)
T ss_pred EEEEEecCccHHHHHhhccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHH--HhcCc
Confidence 3445566776 456667886 9999999999999999999999996 46799999988 55554
No 92
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=98.10 E-value=0.023 Score=60.85 Aligned_cols=128 Identities=14% Similarity=0.176 Sum_probs=71.0
Q ss_pred CCEEEEEcCCC-------------ccCHHHHHHHHHH--------HHhcCCc----EEEEEEccCCcch-hhhhhhhhcC
Q 046326 7 QPHVAVLPSPG-------------LGHLIPLLEFAKR--------LVLNHGV----HVSFLVITTNEAS-AAKNNLLRSL 60 (476)
Q Consensus 7 ~~rIll~~~p~-------------~GHi~P~l~La~~--------L~~rG~h----~V~~~~~~~~~~~-~~~~~~~~~~ 60 (476)
.+||++++.-+ .|+.-=.+.+|++ |+++| | +|.++|-..+... ......++..
T Consensus 255 ~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G-~~v~~~V~I~TR~~~~~~~~~~~~~~e~~ 333 (784)
T TIGR02470 255 VFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQG-LEITPKILIVTRLIPDAEGTTCNQRLEKV 333 (784)
T ss_pred cceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcC-CCccceEEEEecCCCCccccccccccccc
Confidence 36888876643 5666666777776 57898 9 7778876542211 1011111121
Q ss_pred C--CCceEEEcCCCCCCC-CCCCCCchHHHHHHHHHHhhcHHHHHHHHhcC-CCCEEEECCCcc--hHHHHHHHcCCCeE
Q 046326 61 P--HGLDVVDLPPVDVSA-VTSDDMPVVTRLHAIVEESLSKSLKSVLTELC-NPNALVIDLFCT--QAFEICSQLSIPTY 134 (476)
Q Consensus 61 ~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~pDlVI~D~~~~--~~~~~A~~lgIP~v 134 (476)
+ .+.+.+.+|...... .++.. -....++..+........+.+..+.. +||+|++++... .+..+++.+|||.+
T Consensus 334 ~~~~~~~I~rvp~g~~~~~~~~~~-i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~lgVP~v 412 (784)
T TIGR02470 334 YGTEHAWILRVPFRTENGIILRNW-ISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKLGVTQC 412 (784)
T ss_pred cCCCceEEEEecCCCCcccccccc-cCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhcCCCEE
Confidence 1 278888888655332 10211 11223444444444412333433433 799999877543 24458999999977
Q ss_pred EE
Q 046326 135 SF 136 (476)
Q Consensus 135 ~~ 136 (476)
.+
T Consensus 413 ~t 414 (784)
T TIGR02470 413 TI 414 (784)
T ss_pred EE
Confidence 65
No 93
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=98.07 E-value=0.0011 Score=64.87 Aligned_cols=106 Identities=22% Similarity=0.222 Sum_probs=64.6
Q ss_pred chHHhhccCCccceecccCchHHHHHHhcCCcEeecccc-chhhhhhhhhcceeee---eE-----EeccccCCCCCcCH
Q 046326 353 PQVHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLY-AEQRMNAAMLTAEETG---VA-----VKPETEPGKKVIGR 423 (476)
Q Consensus 353 pq~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~-~DQ~~na~~~~~~~~G---~G-----~~l~~~~~~~~~~~ 423 (476)
.-.+++..+++ ++++. | ..|.|+..+|+|||++=-. .=.+.-|+++ .+.. +- ..+-.+=-.++.|+
T Consensus 253 ~~~~~m~~ad~-al~~S-G-TaTLE~Al~g~P~Vv~Yk~~~lt~~iak~l--vk~~~isL~Niia~~~v~PEliQ~~~~~ 327 (373)
T PF02684_consen 253 ESYDAMAAADA-ALAAS-G-TATLEAALLGVPMVVAYKVSPLTYFIAKRL--VKVKYISLPNIIAGREVVPELIQEDATP 327 (373)
T ss_pred chHHHHHhCcc-hhhcC-C-HHHHHHHHhCCCEEEEEcCcHHHHHHHHHh--hcCCEeechhhhcCCCcchhhhcccCCH
Confidence 34457888886 44444 4 4689999999999987321 1134455655 3322 11 11111101256899
Q ss_pred HHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCCChHHH
Q 046326 424 EEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGGSSSDS 466 (476)
Q Consensus 424 ~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~ 466 (476)
+.+.+++.+++.|++ .++..+...+.+++..+.|.++..+
T Consensus 328 ~~i~~~~~~ll~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (373)
T PF02684_consen 328 ENIAAELLELLENPE---KRKKQKELFREIRQLLGPGASSRAA 367 (373)
T ss_pred HHHHHHHHHHhcCHH---HHHHHHHHHHHHHHhhhhccCCHHH
Confidence 999999999999987 4555555555555555556655543
No 94
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=98.07 E-value=0.0067 Score=60.24 Aligned_cols=109 Identities=16% Similarity=0.197 Sum_probs=65.8
Q ss_pred CCeEecccc--chH---HhhccCCccceeccc---C-chHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccc
Q 046326 344 AGMVVPSWA--PQV---HILRHPSTGGFLSHC---G-WNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPET 414 (476)
Q Consensus 344 ~~~~~~~~~--pq~---~iL~~~~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~ 414 (476)
+++.+.++. ++. .+++.+++ |+.-+ | -.++.||+++|+|+|+....+ ....+ ..-..|+..+
T Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i--~~~~~g~~~~- 322 (372)
T cd03792 252 PDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQI--EDGETGFLVD- 322 (372)
T ss_pred CCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhc--ccCCceEEeC-
Confidence 467777776 332 46777786 66433 2 359999999999999876432 22334 4444565443
Q ss_pred cCCCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHhh
Q 046326 415 EPGKKVIGREEIERVVRLVMEGEE-GKVMRRRVQELKESASRELGDGGSSSDSLASFIKKCK 475 (476)
Q Consensus 415 ~~~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 475 (476)
+.++++.+|.+++++++ .+.|.+++++... +.-+-...++++++-+.
T Consensus 323 -------~~~~~a~~i~~ll~~~~~~~~~~~~a~~~~~-------~~~s~~~~~~~~~~~~~ 370 (372)
T cd03792 323 -------TVEEAAVRILYLLRDPELRRKMGANAREHVR-------ENFLITRHLKDYLYLIS 370 (372)
T ss_pred -------CcHHHHHHHHHHHcCHHHHHHHHHHHHHHHH-------HHcCHHHHHHHHHHHHH
Confidence 24677889999998776 3334444444322 23455555666655443
No 95
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.06 E-value=2.2e-05 Score=76.79 Aligned_cols=134 Identities=12% Similarity=0.151 Sum_probs=75.4
Q ss_pred CCCcEEEEecCCCCCCC-H---HHHHHHHHHHHhC-CCceEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhc
Q 046326 267 PPDSVLFAVPGSGGTLT-A---EQVTEMAWGLEQS-KQRFIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRA 341 (476)
Q Consensus 267 ~~~~vvyvs~GS~~~~~-~---~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~ 341 (476)
.+++.+++++=...... + ..+.+++++|.+. +.++||.....+. .-..+.+....
T Consensus 178 ~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~--------------------~~~~i~~~l~~ 237 (346)
T PF02350_consen 178 APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPR--------------------GSDIIIEKLKK 237 (346)
T ss_dssp TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HH--------------------HHHHHHHHHTT
T ss_pred cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCch--------------------HHHHHHHHhcc
Confidence 44568999985544444 2 4555667777665 7889998864311 00122233322
Q ss_pred CCCCeEeccccch---HHhhccCCccceecccCchHHH-HHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCC
Q 046326 342 QGAGMVVPSWAPQ---VHILRHPSTGGFLSHCGWNSTL-ESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPG 417 (476)
Q Consensus 342 ~~~~~~~~~~~pq---~~iL~~~~~~~~I~HgG~~s~~-eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~ 417 (476)
- +++.+..-+++ ..+|.++++ +|+-.| +++ ||.+.|+|.|.+ .++..|-+....|..+- -
T Consensus 238 ~-~~v~~~~~l~~~~~l~ll~~a~~--vvgdSs--GI~eEa~~lg~P~v~i------R~~geRqe~r~~~~nvl--v--- 301 (346)
T PF02350_consen 238 Y-DNVRLIEPLGYEEYLSLLKNADL--VVGDSS--GIQEEAPSLGKPVVNI------RDSGERQEGRERGSNVL--V--- 301 (346)
T ss_dssp --TTEEEE----HHHHHHHHHHESE--EEESSH--HHHHHGGGGT--EEEC------SSS-S-HHHHHTTSEEE--E---
T ss_pred c-CCEEEECCCCHHHHHHHHhcceE--EEEcCc--cHHHHHHHhCCeEEEe------cCCCCCHHHHhhcceEE--e---
Confidence 1 47777766654 568889985 999999 666 999999999999 22222220012233333 3
Q ss_pred CCCcCHHHHHHHHHHHhcCCh
Q 046326 418 KKVIGREEIERVVRLVMEGEE 438 (476)
Q Consensus 418 ~~~~~~~~l~~ai~~~l~~~~ 438 (476)
..+.+++.+++.+++.+..
T Consensus 302 --~~~~~~I~~ai~~~l~~~~ 320 (346)
T PF02350_consen 302 --GTDPEAIIQAIEKALSDKD 320 (346)
T ss_dssp --TSSHHHHHHHHHHHHH-HH
T ss_pred --CCCHHHHHHHHHHHHhChH
Confidence 2679999999999998633
No 96
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.06 E-value=0.00043 Score=68.49 Aligned_cols=130 Identities=12% Similarity=0.157 Sum_probs=76.4
Q ss_pred cEEEEecCCCC---CCCHHHHHHHHHHHHhCCCceEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhh-cCCCC
Q 046326 270 SVLFAVPGSGG---TLTAEQVTEMAWGLEQSKQRFIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTR-AQGAG 345 (476)
Q Consensus 270 ~vvyvs~GS~~---~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~ 345 (476)
+.|+|++=... ....+.+..+++++...+..+++....... .. ..+-+.+.+... . ++
T Consensus 202 ~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p---------------~~-~~i~~~i~~~~~~~--~~ 263 (365)
T TIGR03568 202 PYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADA---------------GS-RIINEAIEEYVNEH--PN 263 (365)
T ss_pred CEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCC---------------Cc-hHHHHHHHHHhcCC--CC
Confidence 47778875432 334577888999998877666665432211 00 000011222111 2 57
Q ss_pred eEeccccc---hHHhhccCCccceecccCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcC
Q 046326 346 MVVPSWAP---QVHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIG 422 (476)
Q Consensus 346 ~~~~~~~p---q~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~ 422 (476)
+.+.+-++ ...++.++++ +|+-++.+- .||.+.|+|.|.+- + |-+..+.|..+.+ - ..+
T Consensus 264 v~l~~~l~~~~~l~Ll~~a~~--vitdSSggi-~EA~~lg~Pvv~l~---~------R~e~~~~g~nvl~-v-----g~~ 325 (365)
T TIGR03568 264 FRLFKSLGQERYLSLLKNADA--VIGNSSSGI-IEAPSFGVPTINIG---T------RQKGRLRADSVID-V-----DPD 325 (365)
T ss_pred EEEECCCChHHHHHHHHhCCE--EEEcChhHH-HhhhhcCCCEEeec---C------CchhhhhcCeEEE-e-----CCC
Confidence 87776554 4568888985 998875554 99999999999773 2 2200122322221 1 357
Q ss_pred HHHHHHHHHHHhc
Q 046326 423 REEIERVVRLVME 435 (476)
Q Consensus 423 ~~~l~~ai~~~l~ 435 (476)
++++.+++.++++
T Consensus 326 ~~~I~~a~~~~~~ 338 (365)
T TIGR03568 326 KEEIVKAIEKLLD 338 (365)
T ss_pred HHHHHHHHHHHhC
Confidence 8999999999553
No 97
>PRK00654 glgA glycogen synthase; Provisional
Probab=97.90 E-value=0.0044 Score=63.65 Aligned_cols=82 Identities=12% Similarity=0.096 Sum_probs=49.9
Q ss_pred CCeE-eccccchH--HhhccCCccceecc---cCc-hHHHHHHhcCCcEeeccccc--hhhhhhhhhcceeeeeEEeccc
Q 046326 344 AGMV-VPSWAPQV--HILRHPSTGGFLSH---CGW-NSTLESICHGVPMIAWPLYA--EQRMNAAMLTAEETGVAVKPET 414 (476)
Q Consensus 344 ~~~~-~~~~~pq~--~iL~~~~~~~~I~H---gG~-~s~~eal~~GvP~l~~P~~~--DQ~~na~~~~~~~~G~G~~l~~ 414 (476)
.++. ..+|-.+. .++..+++ ||.- -|. .+.+||+++|+|.|+.-..+ |.-.+...- ...+-|+.++.
T Consensus 337 ~~v~~~~g~~~~~~~~~~~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~--~~~~~G~lv~~ 412 (466)
T PRK00654 337 GKVGVQIGYDEALAHRIYAGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPE--DGEATGFVFDD 412 (466)
T ss_pred CcEEEEEeCCHHHHHHHHhhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCC--CCCCceEEeCC
Confidence 3443 34563332 46788886 5532 344 48899999999999875422 211111111 11256777755
Q ss_pred cCCCCCcCHHHHHHHHHHHhc
Q 046326 415 EPGKKVIGREEIERVVRLVME 435 (476)
Q Consensus 415 ~~~~~~~~~~~l~~ai~~~l~ 435 (476)
-++++|.++|.+++.
T Consensus 413 ------~d~~~la~~i~~~l~ 427 (466)
T PRK00654 413 ------FNAEDLLRALRRALE 427 (466)
T ss_pred ------CCHHHHHHHHHHHHH
Confidence 568999999999876
No 98
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=97.78 E-value=0.00096 Score=67.21 Aligned_cols=110 Identities=15% Similarity=0.185 Sum_probs=73.1
Q ss_pred CCeEeccccchHH---hhccCCccceecccC----chHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccC
Q 046326 344 AGMVVPSWAPQVH---ILRHPSTGGFLSHCG----WNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEP 416 (476)
Q Consensus 344 ~~~~~~~~~pq~~---iL~~~~~~~~I~HgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~ 416 (476)
.++...+|+++.+ ++..++..+||...- -++++||+++|+|+|+.... .....+ .+.+.|..+..
T Consensus 289 ~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vg----g~~e~i--~~~~~G~l~~~-- 360 (407)
T cd04946 289 ISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVG----GTPEIV--DNGGNGLLLSK-- 360 (407)
T ss_pred ceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCC----CcHHHh--cCCCcEEEeCC--
Confidence 5788899999764 444433334665442 46899999999999986543 344555 55447776654
Q ss_pred CCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHHHHHhccCCChHHHHHHHH
Q 046326 417 GKKVIGREEIERVVRLVMEGEE-GKVMRRRVQELKESASRELGDGGSSSDSLASFI 471 (476)
Q Consensus 417 ~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 471 (476)
.-+.+++.++|.++++|++ ...|++++++.- .+.-+.+...++|+
T Consensus 361 ---~~~~~~la~~I~~ll~~~~~~~~m~~~ar~~~-------~~~f~~~~~~~~~~ 406 (407)
T cd04946 361 ---DPTPNELVSSLSKFIDNEEEYQTMREKAREKW-------EENFNASKNYREFA 406 (407)
T ss_pred ---CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-------HHHcCHHHhHHHhc
Confidence 4578999999999998776 344555554443 33556666666554
No 99
>PLN00142 sucrose synthase
Probab=97.78 E-value=0.02 Score=61.38 Aligned_cols=110 Identities=11% Similarity=0.128 Sum_probs=58.2
Q ss_pred HHHHHHhcCCcEEE----EEEccCCcc-hhhhhhhhhcCC--CCceEEEcCCCCCCCCCCCCCchHHHHHHHHHHhhcHH
Q 046326 27 FAKRLVLNHGVHVS----FLVITTNEA-SAAKNNLLRSLP--HGLDVVDLPPVDVSAVTSDDMPVVTRLHAIVEESLSKS 99 (476)
Q Consensus 27 La~~L~~rG~h~V~----~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (476)
|+++|+++| |+|+ ++|--.+.. .......++..+ .+.+...+|.....+.++.. -....++..+.......
T Consensus 320 l~~~l~~~G-~~v~~~v~i~TR~i~~~~~~~~~~~~e~v~~~~~~~I~rvP~g~~~~~l~~~-i~ke~l~p~L~~f~~~~ 397 (815)
T PLN00142 320 MLLRIKQQG-LDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTEHSHILRVPFRTEKGILRKW-ISRFDVWPYLETFAEDA 397 (815)
T ss_pred HHHHHHhcC-CCccceeEEEEeccCCccCCcccCcceeccCCCceEEEecCCCCCccccccc-cCHHHHHHHHHHHHHHH
Confidence 557888999 9774 665332111 111112112222 26777787765532221211 11122344444444413
Q ss_pred HHHHHHhcC-CCCEEEECCCcc--hHHHHHHHcCCCeEEEec
Q 046326 100 LKSVLTELC-NPNALVIDLFCT--QAFEICSQLSIPTYSFVT 138 (476)
Q Consensus 100 l~~~l~~~~-~pDlVI~D~~~~--~~~~~A~~lgIP~v~~~~ 138 (476)
.+.+..+.. +||+|.+++... .+..+++++|||.+....
T Consensus 398 ~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~H 439 (815)
T PLN00142 398 ASEILAELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAH 439 (815)
T ss_pred HHHHHHhcCCCCCEEEECCccHHHHHHHHHHHhCCCEEEEcc
Confidence 334434443 799999886554 344589999999997654
No 100
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=97.72 E-value=0.019 Score=59.20 Aligned_cols=116 Identities=10% Similarity=0.026 Sum_probs=63.8
Q ss_pred CCeEeccccchH---HhhccCCccceecc---cCc-hHHHHHHhcCCcEeeccccc--hhhhhhhhhcceeeeeEEeccc
Q 046326 344 AGMVVPSWAPQV---HILRHPSTGGFLSH---CGW-NSTLESICHGVPMIAWPLYA--EQRMNAAMLTAEETGVAVKPET 414 (476)
Q Consensus 344 ~~~~~~~~~pq~---~iL~~~~~~~~I~H---gG~-~s~~eal~~GvP~l~~P~~~--DQ~~na~~~~~~~~G~G~~l~~ 414 (476)
+++.+....++. .++..+++ ++.- -|. .+.+||+++|+|.|+....+ |.-.+.... .+.|.|..++.
T Consensus 351 ~~v~~~~~~~~~~~~~~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~--~~~~~G~~~~~ 426 (476)
T cd03791 351 GRVAVLIGYDEALAHLIYAGADF--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNED--TGEGTGFVFEG 426 (476)
T ss_pred CcEEEEEeCCHHHHHHHHHhCCE--EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCC--CCCCCeEEeCC
Confidence 466543333332 36777786 5532 122 47899999999999876532 222221111 23347877765
Q ss_pred cCCCCCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHhh
Q 046326 415 EPGKKVIGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGGSSSDSLASFIKKCK 475 (476)
Q Consensus 415 ~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 475 (476)
-+.+++.+++.++++... -++...+++++ +....-+-+..++++++.+.
T Consensus 427 ------~~~~~l~~~i~~~l~~~~---~~~~~~~~~~~---~~~~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 427 ------YNADALLAALRRALALYR---DPEAWRKLQRN---AMAQDFSWDRSAKEYLELYR 475 (476)
T ss_pred ------CCHHHHHHHHHHHHHHHc---CHHHHHHHHHH---HhccCCChHHHHHHHHHHHh
Confidence 468999999999885322 11122222222 22334455566667666553
No 101
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=97.71 E-value=0.052 Score=55.88 Aligned_cols=78 Identities=12% Similarity=-0.028 Sum_probs=50.9
Q ss_pred CCeEeccccchH---HhhccCCccceecc---cCc-hHHHHHHhcCCcEeeccccchhhhhhhhhcceee------eeEE
Q 046326 344 AGMVVPSWAPQV---HILRHPSTGGFLSH---CGW-NSTLESICHGVPMIAWPLYAEQRMNAAMLTAEET------GVAV 410 (476)
Q Consensus 344 ~~~~~~~~~pq~---~iL~~~~~~~~I~H---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~------G~G~ 410 (476)
.++.+....++. .++..+++ +|.- -|. .+.+||+++|+|.|+....+ ....+ ... +.|+
T Consensus 346 ~~v~~~~~~~~~~~~~~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg----~~e~v--~~~~~~~~~~~G~ 417 (473)
T TIGR02095 346 GNVRVIIGYDEALAHLIYAGADF--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG----LADTV--VDGDPEAESGTGF 417 (473)
T ss_pred CcEEEEEcCCHHHHHHHHHhCCE--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCC----ccceE--ecCCCCCCCCceE
Confidence 456554444543 47778886 5532 244 37889999999999875532 22222 222 6677
Q ss_pred eccccCCCCCcCHHHHHHHHHHHhc
Q 046326 411 KPETEPGKKVIGREEIERVVRLVME 435 (476)
Q Consensus 411 ~l~~~~~~~~~~~~~l~~ai~~~l~ 435 (476)
.+.. -+++++.++|.+++.
T Consensus 418 l~~~------~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 418 LFEE------YDPGALLAALSRALR 436 (473)
T ss_pred EeCC------CCHHHHHHHHHHHHH
Confidence 7655 578899999999886
No 102
>PLN02846 digalactosyldiacylglycerol synthase
Probab=97.70 E-value=0.076 Score=53.84 Aligned_cols=73 Identities=12% Similarity=0.089 Sum_probs=50.2
Q ss_pred eccccchHHhhccCCccceeccc----CchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCH
Q 046326 348 VPSWAPQVHILRHPSTGGFLSHC----GWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGR 423 (476)
Q Consensus 348 ~~~~~pq~~iL~~~~~~~~I~Hg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~ 423 (476)
..++.+...++...++ ||.-+ =-+++.||+++|+|+|+.-..+ + ..+ .+-+-|... -+.
T Consensus 288 f~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v--~~~~ng~~~--------~~~ 350 (462)
T PLN02846 288 YPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFF--KQFPNCRTY--------DDG 350 (462)
T ss_pred ECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-cee--ecCCceEec--------CCH
Confidence 4566666678888886 77663 3478999999999999985432 2 334 333333332 257
Q ss_pred HHHHHHHHHHhcCC
Q 046326 424 EEIERVVRLVMEGE 437 (476)
Q Consensus 424 ~~l~~ai~~~l~~~ 437 (476)
+++.+++.++|.++
T Consensus 351 ~~~a~ai~~~l~~~ 364 (462)
T PLN02846 351 KGFVRATLKALAEE 364 (462)
T ss_pred HHHHHHHHHHHccC
Confidence 89999999999754
No 103
>PLN02275 transferase, transferring glycosyl groups
Probab=97.70 E-value=0.068 Score=53.09 Aligned_cols=75 Identities=11% Similarity=0.145 Sum_probs=51.1
Q ss_pred CCeEecc-ccchHH---hhccCCccceec-c-----cC-chHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEec
Q 046326 344 AGMVVPS-WAPQVH---ILRHPSTGGFLS-H-----CG-WNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKP 412 (476)
Q Consensus 344 ~~~~~~~-~~pq~~---iL~~~~~~~~I~-H-----gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l 412 (476)
+|+.... |+|+.+ +|..+++ +|. + -| -+++.||+++|+|+|+.... .+...+ ++-+.|..+
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~g----g~~eiv--~~g~~G~lv 357 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIGELV--KDGKNGLLF 357 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecCC----ChHHHc--cCCCCeEEE
Confidence 4555544 788754 5888997 552 1 12 35799999999999997532 255556 666678765
Q ss_pred cccCCCCCcCHHHHHHHHHHHh
Q 046326 413 ETEPGKKVIGREEIERVVRLVM 434 (476)
Q Consensus 413 ~~~~~~~~~~~~~l~~ai~~~l 434 (476)
+ +.++++++|.+++
T Consensus 358 ~--------~~~~la~~i~~l~ 371 (371)
T PLN02275 358 S--------SSSELADQLLELL 371 (371)
T ss_pred C--------CHHHHHHHHHHhC
Confidence 2 3788999988764
No 104
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.60 E-value=0.027 Score=54.43 Aligned_cols=110 Identities=15% Similarity=0.149 Sum_probs=67.7
Q ss_pred HhhccCCccceecccCchHHHHHHhcCCcEeeccccch--hhhhhhhhcceeeee--------EEeccccCCCCCcCHHH
Q 046326 356 HILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLYAE--QRMNAAMLTAEETGV--------AVKPETEPGKKVIGREE 425 (476)
Q Consensus 356 ~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~D--Q~~na~~~~~~~~G~--------G~~l~~~~~~~~~~~~~ 425 (476)
.++..+++ .+.-+|- -+.|+..+|+|||+.=- .+ -+.-+++. .+... |..+-.+=-+.+++++.
T Consensus 260 ~a~~~aD~--al~aSGT-~tLE~aL~g~P~Vv~Yk-~~~it~~iak~l--vk~~yisLpNIi~~~~ivPEliq~~~~pe~ 333 (381)
T COG0763 260 KAFAAADA--ALAASGT-ATLEAALAGTPMVVAYK-VKPITYFIAKRL--VKLPYVSLPNILAGREIVPELIQEDCTPEN 333 (381)
T ss_pred HHHHHhhH--HHHhccH-HHHHHHHhCCCEEEEEe-ccHHHHHHHHHh--ccCCcccchHHhcCCccchHHHhhhcCHHH
Confidence 36777775 4444553 47899999999998621 11 23344444 33221 21111111125688999
Q ss_pred HHHHHHHHhcCCh-hHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHhh
Q 046326 426 IERVVRLVMEGEE-GKVMRRRVQELKESASRELGDGGSSSDSLASFIKKCK 475 (476)
Q Consensus 426 l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 475 (476)
|.+++..++.|+. .+++++...++.+.++ .+++++.+.+.+++.+.
T Consensus 334 la~~l~~ll~~~~~~~~~~~~~~~l~~~l~----~~~~~e~aA~~vl~~~~ 380 (381)
T COG0763 334 LARALEELLLNGDRREALKEKFRELHQYLR----EDPASEIAAQAVLELLL 380 (381)
T ss_pred HHHHHHHHhcChHhHHHHHHHHHHHHHHHc----CCcHHHHHHHHHHHHhc
Confidence 9999999999884 4456666666666654 45577777777776653
No 105
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.56 E-value=0.0042 Score=61.99 Aligned_cols=112 Identities=9% Similarity=0.055 Sum_probs=71.9
Q ss_pred CCeEeccccchH---HhhccCCccceecc----cCc-hHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEecccc
Q 046326 344 AGMVVPSWAPQV---HILRHPSTGGFLSH----CGW-NSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETE 415 (476)
Q Consensus 344 ~~~~~~~~~pq~---~iL~~~~~~~~I~H----gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~ 415 (476)
.++...+++|+. .+++.+++ +|.. -|. .++.||+++|+|+|+....+ +...+ ++-..|..+..
T Consensus 257 ~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg----~~Eiv--~~~~~G~~l~~- 327 (380)
T PRK15484 257 DRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG----ITEFV--LEGITGYHLAE- 327 (380)
T ss_pred CcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCCC----cHhhc--ccCCceEEEeC-
Confidence 578888999864 46888887 5542 333 57889999999999986532 33445 45456764433
Q ss_pred CCCCCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHhh
Q 046326 416 PGKKVIGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGGSSSDSLASFIKKCK 475 (476)
Q Consensus 416 ~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 475 (476)
..+.++++++|.++++|++...+.+++++. ..+.-+-+...+++.+.|+
T Consensus 328 ----~~d~~~la~~I~~ll~d~~~~~~~~~ar~~-------~~~~fsw~~~a~~~~~~l~ 376 (380)
T PRK15484 328 ----PMTSDSIISDINRTLADPELTQIAEQAKDF-------VFSKYSWEGVTQRFEEQIH 376 (380)
T ss_pred ----CCCHHHHHHHHHHHHcCHHHHHHHHHHHHH-------HHHhCCHHHHHHHHHHHHH
Confidence 357999999999999987622233333322 2234455555666655543
No 106
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.54 E-value=0.00066 Score=59.25 Aligned_cols=91 Identities=16% Similarity=0.245 Sum_probs=65.3
Q ss_pred CCeEeccccc--h-HHhhccCCccceecc----cCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccC
Q 046326 344 AGMVVPSWAP--Q-VHILRHPSTGGFLSH----CGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEP 416 (476)
Q Consensus 344 ~~~~~~~~~p--q-~~iL~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~ 416 (476)
.++.+.++.+ + ..++..+++ +|+. +...++.||+.+|+|+|+.- ...+...+ ...+.|..++.
T Consensus 73 ~~i~~~~~~~~~~l~~~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~~----~~~~~e~~--~~~~~g~~~~~-- 142 (172)
T PF00534_consen 73 ENIIFLGYVPDDELDELYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIASD----IGGNNEII--NDGVNGFLFDP-- 142 (172)
T ss_dssp TTEEEEESHSHHHHHHHHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEES----STHHHHHS--GTTTSEEEEST--
T ss_pred cccccccccccccccccccccee--ccccccccccccccccccccccceeecc----ccCCceee--ccccceEEeCC--
Confidence 5788889988 3 357888886 6655 55679999999999999864 44455555 55567888876
Q ss_pred CCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHH
Q 046326 417 GKKVIGREEIERVVRLVMEGEE-GKVMRRRVQE 448 (476)
Q Consensus 417 ~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~ 448 (476)
.+.+++.++|.+++++++ .+.+.+++++
T Consensus 143 ----~~~~~l~~~i~~~l~~~~~~~~l~~~~~~ 171 (172)
T PF00534_consen 143 ----NDIEELADAIEKLLNDPELRQKLGKNARE 171 (172)
T ss_dssp ----TSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHCCHHHHHHHHHHhcC
Confidence 399999999999999876 3345555443
No 107
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.48 E-value=0.0056 Score=61.61 Aligned_cols=110 Identities=12% Similarity=0.136 Sum_probs=73.1
Q ss_pred CCeEeccccchHH---hhccCCccceecc---------cCc-hHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEE
Q 046326 344 AGMVVPSWAPQVH---ILRHPSTGGFLSH---------CGW-NSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAV 410 (476)
Q Consensus 344 ~~~~~~~~~pq~~---iL~~~~~~~~I~H---------gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~ 410 (476)
+++.+.+|+|+.+ ++..+++ ||.- -|. +++.||+++|+|+|+....+ ....+ ++-..|.
T Consensus 279 ~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v--~~~~~G~ 350 (406)
T PRK15427 279 DVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELV--EADKSGW 350 (406)
T ss_pred CeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhh--cCCCceE
Confidence 5789999999754 6778886 5532 244 67899999999999975432 33344 4445676
Q ss_pred eccccCCCCCcCHHHHHHHHHHHhc-CCh-hHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHh
Q 046326 411 KPETEPGKKVIGREEIERVVRLVME-GEE-GKVMRRRVQELKESASRELGDGGSSSDSLASFIKKC 474 (476)
Q Consensus 411 ~l~~~~~~~~~~~~~l~~ai~~~l~-~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 474 (476)
.++. -+.++++++|.++++ |++ .+.+.+++++..+ +.-+.+...+++.+.+
T Consensus 351 lv~~------~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~-------~~f~~~~~~~~l~~~~ 403 (406)
T PRK15427 351 LVPE------NDAQALAQRLAAFSQLDTDELAPVVKRAREKVE-------TDFNQQVINRELASLL 403 (406)
T ss_pred EeCC------CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHH
Confidence 6654 468999999999998 766 3445555544332 2445555555555543
No 108
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=97.37 E-value=0.2 Score=50.62 Aligned_cols=80 Identities=14% Similarity=0.035 Sum_probs=53.4
Q ss_pred CCeEeccccchH---HhhccCCccceecc---cCc-hHHHHHHhcCCcEeeccccchhhhhhhhhcce---eeeeEEecc
Q 046326 344 AGMVVPSWAPQV---HILRHPSTGGFLSH---CGW-NSTLESICHGVPMIAWPLYAEQRMNAAMLTAE---ETGVAVKPE 413 (476)
Q Consensus 344 ~~~~~~~~~pq~---~iL~~~~~~~~I~H---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~---~~G~G~~l~ 413 (476)
++|...+++|+. .+|..+++ +|+- =|. .++.||+++|+|.|+.-..+. ....+ + .-..|...
T Consensus 305 ~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp---~~~iv--~~~~~g~~G~l~- 376 (419)
T cd03806 305 DKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFGIGVVEYMAAGLIPLAHASGGP---LLDIV--VPWDGGPTGFLA- 376 (419)
T ss_pred CeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcccHHHHHHHcCCcEEEEcCCCC---chhee--eccCCCCceEEe-
Confidence 578888998875 47777775 4432 122 488999999999998643221 11122 2 23456542
Q ss_pred ccCCCCCcCHHHHHHHHHHHhcCCh
Q 046326 414 TEPGKKVIGREEIERVVRLVMEGEE 438 (476)
Q Consensus 414 ~~~~~~~~~~~~l~~ai~~~l~~~~ 438 (476)
. ++++++++|.+++++++
T Consensus 377 ------~-d~~~la~ai~~ll~~~~ 394 (419)
T cd03806 377 ------S-TAEEYAEAIEKILSLSE 394 (419)
T ss_pred ------C-CHHHHHHHHHHHHhCCH
Confidence 1 68999999999998754
No 109
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=97.32 E-value=0.002 Score=63.39 Aligned_cols=136 Identities=10% Similarity=0.092 Sum_probs=85.0
Q ss_pred EEecCCCCCCCHHHHHHHHHHHHhCCCceEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCCeEecccc
Q 046326 273 FAVPGSGGTLTAEQVTEMAWGLEQSKQRFIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSWA 352 (476)
Q Consensus 273 yvs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~ 352 (476)
++..|++.. ...+..++++++..+.++++. |.+.. .+.+.+ ... +++.+.+++
T Consensus 198 il~~G~~~~--~K~~~~li~a~~~~~~~l~iv-G~g~~---------------------~~~l~~-~~~--~~V~~~g~~ 250 (351)
T cd03804 198 YLSVGRLVP--YKRIDLAIEAFNKLGKRLVVI-GDGPE---------------------LDRLRA-KAG--PNVTFLGRV 250 (351)
T ss_pred EEEEEcCcc--ccChHHHHHHHHHCCCcEEEE-ECChh---------------------HHHHHh-hcC--CCEEEecCC
Confidence 444566642 233556777777777665543 43211 122222 122 789999999
Q ss_pred chH---HhhccCCccceecccCc-hHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHH
Q 046326 353 PQV---HILRHPSTGGFLSHCGW-NSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIER 428 (476)
Q Consensus 353 pq~---~iL~~~~~~~~I~HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ 428 (476)
|+. .++..+++-.+-+.-|+ .++.||+++|+|+|+....+ ....+ ++.+.|..++. -+.+++++
T Consensus 251 ~~~~~~~~~~~ad~~v~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i--~~~~~G~~~~~------~~~~~la~ 318 (351)
T cd03804 251 SDEELRDLYARARAFLFPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETV--IDGVTGILFEE------QTVESLAA 318 (351)
T ss_pred CHHHHHHHHHhCCEEEECCcCCCCchHHHHHHcCCCEEEeCCCC----Cccee--eCCCCEEEeCC------CCHHHHHH
Confidence 984 47888886222233344 46789999999999986533 33445 55567877755 46888999
Q ss_pred HHHHHhcCC-h-hHHHHHHHH
Q 046326 429 VVRLVMEGE-E-GKVMRRRVQ 447 (476)
Q Consensus 429 ai~~~l~~~-~-~~~~~~~a~ 447 (476)
+|.++++|+ . .+.++++++
T Consensus 319 ~i~~l~~~~~~~~~~~~~~~~ 339 (351)
T cd03804 319 AVERFEKNEDFDPQAIRAHAE 339 (351)
T ss_pred HHHHHHhCcccCHHHHHHHHH
Confidence 999999887 3 333444443
No 110
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.26 E-value=0.0022 Score=51.76 Aligned_cols=61 Identities=21% Similarity=0.202 Sum_probs=46.1
Q ss_pred cccchH-HhhccCCccceecccCchHHHHHHhcCCcEeecccc--------chhhhhhhhhcceeeeeEEeccc
Q 046326 350 SWAPQV-HILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLY--------AEQRMNAAMLTAEETGVAVKPET 414 (476)
Q Consensus 350 ~~~pq~-~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~--------~DQ~~na~~~~~~~~G~G~~l~~ 414 (476)
++.+-. .+...+++ +|+|||.||+..++..++|.|++|-. .+|..-|..+ .+.+.=.....
T Consensus 54 ~~~~kiQsli~darI--VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~kl--ae~~~vv~~sp 123 (161)
T COG5017 54 DKEEKIQSLIHDARI--VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKL--AEINYVVACSP 123 (161)
T ss_pred chHHHHHHHhhcceE--EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHH--HhcCceEEEcC
Confidence 334443 35566665 99999999999999999999999963 3588888888 66666555543
No 111
>PLN02316 synthase/transferase
Probab=97.23 E-value=0.52 Score=52.31 Aligned_cols=113 Identities=7% Similarity=0.012 Sum_probs=65.5
Q ss_pred CCeEeccccchH---HhhccCCccceecc-----cCchHHHHHHhcCCcEeeccccc--hhhhhh-------hhhcceee
Q 046326 344 AGMVVPSWAPQV---HILRHPSTGGFLSH-----CGWNSTLESICHGVPMIAWPLYA--EQRMNA-------AMLTAEET 406 (476)
Q Consensus 344 ~~~~~~~~~pq~---~iL~~~~~~~~I~H-----gG~~s~~eal~~GvP~l~~P~~~--DQ~~na-------~~~~~~~~ 406 (476)
+++.+....+.. .+++.+++ |+.- || .+.+||+++|+|.|+-...+ |..... ... ...
T Consensus 900 ~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~G-LvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~--g~~ 974 (1036)
T PLN02316 900 DRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCG-LTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQ--GLE 974 (1036)
T ss_pred CeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCcc-HHHHHHHHcCCCeEEEcCCCcHhhcccccccccccccc--ccC
Confidence 355554444443 47888886 6643 33 58999999999988865532 322211 100 112
Q ss_pred eeEEeccccCCCCCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHH
Q 046326 407 GVAVKPETEPGKKVIGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGGSSSDSLASFIK 472 (476)
Q Consensus 407 G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 472 (476)
+-|+.++. .+++.|..+|.+++.+ |.+....+++..++++...-|-.+.+.+.++
T Consensus 975 ~tGflf~~------~d~~aLa~AL~raL~~-----~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~ 1029 (1036)
T PLN02316 975 PNGFSFDG------ADAAGVDYALNRAISA-----WYDGRDWFNSLCKRVMEQDWSWNRPALDYME 1029 (1036)
T ss_pred CceEEeCC------CCHHHHHHHHHHHHhh-----hhhhHHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 35666654 6788999999999875 3333334455555554445555555554443
No 112
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.22 E-value=0.21 Score=48.57 Aligned_cols=104 Identities=18% Similarity=0.256 Sum_probs=70.3
Q ss_pred CeEec---cccchHHhhccCCccceecccCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCc
Q 046326 345 GMVVP---SWAPQVHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVI 421 (476)
Q Consensus 345 ~~~~~---~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~ 421 (476)
++.+. +|.+...++.++-+ ++|-+| |-.-||-..|+|.+++=...+|+. + .+.|.-+.+ ..
T Consensus 263 ~v~li~pl~~~~f~~L~~~a~~--iltDSG-giqEEAp~lg~Pvl~lR~~TERPE---~---v~agt~~lv-------g~ 326 (383)
T COG0381 263 RVKLIDPLGYLDFHNLMKNAFL--ILTDSG-GIQEEAPSLGKPVLVLRDTTERPE---G---VEAGTNILV-------GT 326 (383)
T ss_pred cEEEeCCcchHHHHHHHHhceE--EEecCC-chhhhHHhcCCcEEeeccCCCCcc---c---eecCceEEe-------Cc
Confidence 45544 45567788888874 888877 446789999999999977666665 2 233444443 35
Q ss_pred CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCCChHHHHHHHH
Q 046326 422 GREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGGSSSDSLASFI 471 (476)
Q Consensus 422 ~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 471 (476)
+.+.+.+++.+++++++ ..+|.+....- .++|.++.+-++.+.
T Consensus 327 ~~~~i~~~~~~ll~~~~---~~~~m~~~~np----Ygdg~as~rIv~~l~ 369 (383)
T COG0381 327 DEENILDAATELLEDEE---FYERMSNAKNP----YGDGNASERIVEILL 369 (383)
T ss_pred cHHHHHHHHHHHhhChH---HHHHHhcccCC----CcCcchHHHHHHHHH
Confidence 67999999999999887 66665554443 244555555554443
No 113
>PLN02501 digalactosyldiacylglycerol synthase
Probab=97.16 E-value=0.44 Score=50.23 Aligned_cols=77 Identities=10% Similarity=0.036 Sum_probs=52.7
Q ss_pred CeEeccccchH-HhhccCCccceecc---cC-chHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCC
Q 046326 345 GMVVPSWAPQV-HILRHPSTGGFLSH---CG-WNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKK 419 (476)
Q Consensus 345 ~~~~~~~~pq~-~iL~~~~~~~~I~H---gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~ 419 (476)
++...++.++. .++...++ ||.- =| -+++.||+++|+|+|+.-..+.. .+ .. |.+..+.
T Consensus 602 ~V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e-----~V--~~-g~nGll~------ 665 (794)
T PLN02501 602 NLNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNE-----FF--RS-FPNCLTY------ 665 (794)
T ss_pred EEEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCc-----eE--ee-cCCeEec------
Confidence 46666777765 48888886 6653 23 46899999999999998765421 13 32 3222222
Q ss_pred CcCHHHHHHHHHHHhcCCh
Q 046326 420 VIGREEIERVVRLVMEGEE 438 (476)
Q Consensus 420 ~~~~~~l~~ai~~~l~~~~ 438 (476)
-+.+++.++|.+++.++.
T Consensus 666 -~D~EafAeAI~~LLsd~~ 683 (794)
T PLN02501 666 -KTSEDFVAKVKEALANEP 683 (794)
T ss_pred -CCHHHHHHHHHHHHhCch
Confidence 258999999999998774
No 114
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.08 E-value=0.0046 Score=62.06 Aligned_cols=139 Identities=21% Similarity=0.301 Sum_probs=73.7
Q ss_pred CcEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCC---CC
Q 046326 269 DSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQRFIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQG---AG 345 (476)
Q Consensus 269 ~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~---~~ 345 (476)
+.++|.+|.+....+++.+.-.++-|++.+...+|..+.+.. . .+.+.+.....| +.
T Consensus 284 d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~----------------~----~~~l~~~~~~~Gv~~~R 343 (468)
T PF13844_consen 284 DAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPAS----------------G----EARLRRRFAAHGVDPDR 343 (468)
T ss_dssp SSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTT----------------H----HHHHHHHHHHTTS-GGG
T ss_pred CceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH----------------H----HHHHHHHHHHcCCChhh
Confidence 349999999998888998888888899999999998865421 0 012222222111 56
Q ss_pred eEeccccchHH---hhccCCcccee---cccCchHHHHHHhcCCcEeeccccch-hhhhhhhhcceeeeeEEeccccCCC
Q 046326 346 MVVPSWAPQVH---ILRHPSTGGFL---SHCGWNSTLESICHGVPMIAWPLYAE-QRMNAAMLTAEETGVAVKPETEPGK 418 (476)
Q Consensus 346 ~~~~~~~pq~~---iL~~~~~~~~I---~HgG~~s~~eal~~GvP~l~~P~~~D-Q~~na~~~~~~~~G~G~~l~~~~~~ 418 (476)
+++.++.|+.+ .+...++ ++ ..+|..|++|||+.|||+|.+|--.= ...-+..+ ..+|+.-.+-
T Consensus 344 i~f~~~~~~~ehl~~~~~~DI--~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL--~~lGl~ElIA----- 414 (468)
T PF13844_consen 344 IIFSPVAPREEHLRRYQLADI--CLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASIL--RALGLPELIA----- 414 (468)
T ss_dssp EEEEE---HHHHHHHGGG-SE--EE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHH--HHHT-GGGB------
T ss_pred EEEcCCCCHHHHHHHhhhCCE--EeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHH--HHcCCchhcC-----
Confidence 77777777544 3444554 33 35788999999999999999985321 12223334 4455554332
Q ss_pred CCcCHHHHHHHHHHHhcCCh
Q 046326 419 KVIGREEIERVVRLVMEGEE 438 (476)
Q Consensus 419 ~~~~~~~l~~ai~~~l~~~~ 438 (476)
-+.++-.+.-.++-+|.+
T Consensus 415 --~s~~eYv~~Av~La~D~~ 432 (468)
T PF13844_consen 415 --DSEEEYVEIAVRLATDPE 432 (468)
T ss_dssp --SSHHHHHHHHHHHHH-HH
T ss_pred --CCHHHHHHHHHHHhCCHH
Confidence 245554444445666665
No 115
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=96.97 E-value=0.0053 Score=51.04 Aligned_cols=79 Identities=23% Similarity=0.308 Sum_probs=49.6
Q ss_pred CCeEeccccchH-HhhccCCccceecc--cC-chHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCC
Q 046326 344 AGMVVPSWAPQV-HILRHPSTGGFLSH--CG-WNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKK 419 (476)
Q Consensus 344 ~~~~~~~~~pq~-~iL~~~~~~~~I~H--gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~ 419 (476)
+++...+|+++. .++..+++....+. -| -+++.|++.+|+|+|+.+. .....+ +..+.|..+ .
T Consensus 53 ~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-----~~~~~~--~~~~~~~~~-~----- 119 (135)
T PF13692_consen 53 PNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-----GAEGIV--EEDGCGVLV-A----- 119 (135)
T ss_dssp CTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-----HCHCHS-----SEEEE--T-----
T ss_pred CCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-----chhhhe--eecCCeEEE-C-----
Confidence 799999999753 58889998444432 23 4899999999999999866 122334 456777766 4
Q ss_pred CcCHHHHHHHHHHHhcC
Q 046326 420 VIGREEIERVVRLVMEG 436 (476)
Q Consensus 420 ~~~~~~l~~ai~~~l~~ 436 (476)
-+++++.++|.++++|
T Consensus 120 -~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 120 -NDPEELAEAIERLLND 135 (135)
T ss_dssp -T-HHHHHHHHHHHHH-
T ss_pred -CCHHHHHHHHHHHhcC
Confidence 3799999999999865
No 116
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=96.77 E-value=0.021 Score=56.58 Aligned_cols=99 Identities=11% Similarity=0.129 Sum_probs=69.0
Q ss_pred CCeEeccccchH-HhhccCCccceecc--cCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCC
Q 046326 344 AGMVVPSWAPQV-HILRHPSTGGFLSH--CGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKV 420 (476)
Q Consensus 344 ~~~~~~~~~pq~-~iL~~~~~~~~I~H--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~ 420 (476)
+++.+.++.++. .++..+++-.+.++ |...++.||+++|+|+|+..... .....+ +.-..|..++.
T Consensus 261 ~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v--~~~~~G~lv~~------ 329 (372)
T cd04949 261 DYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEII--EDGENGYLVPK------ 329 (372)
T ss_pred ceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHc--ccCCCceEeCC------
Confidence 567787777665 58888887444444 33468999999999999964321 123344 45456766654
Q ss_pred cCHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHH
Q 046326 421 IGREEIERVVRLVMEGEE-GKVMRRRVQELKESA 453 (476)
Q Consensus 421 ~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~ 453 (476)
-+.++++++|.+++++++ ...+.+++++.++++
T Consensus 330 ~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~ 363 (372)
T cd04949 330 GDIEALAEAIIELLNDPKLLQKFSEAAYENAERY 363 (372)
T ss_pred CcHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHh
Confidence 578999999999999876 556777777665543
No 117
>PLN02949 transferase, transferring glycosyl groups
Probab=96.76 E-value=0.81 Score=46.84 Aligned_cols=92 Identities=11% Similarity=0.030 Sum_probs=57.2
Q ss_pred CCeEeccccchHH---hhccCCccceec---ccCch-HHHHHHhcCCcEeeccccchhhhhhhhhccee--ee-eEEecc
Q 046326 344 AGMVVPSWAPQVH---ILRHPSTGGFLS---HCGWN-STLESICHGVPMIAWPLYAEQRMNAAMLTAEE--TG-VAVKPE 413 (476)
Q Consensus 344 ~~~~~~~~~pq~~---iL~~~~~~~~I~---HgG~~-s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~--~G-~G~~l~ 413 (476)
+++...+++|+.+ +|..+++ +|+ +=|+| ++.||+++|+|.|+....+- ....+ .. .| .|..
T Consensus 335 ~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp---~~eIV--~~~~~g~tG~l-- 405 (463)
T PLN02949 335 GDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGP---KMDIV--LDEDGQQTGFL-- 405 (463)
T ss_pred CcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCC---cceee--ecCCCCccccc--
Confidence 5788889998654 6777775 553 23333 79999999999999865331 01111 11 12 1222
Q ss_pred ccCCCCCcCHHHHHHHHHHHhcCC-h-hHHHHHHHHHHH
Q 046326 414 TEPGKKVIGREEIERVVRLVMEGE-E-GKVMRRRVQELK 450 (476)
Q Consensus 414 ~~~~~~~~~~~~l~~ai~~~l~~~-~-~~~~~~~a~~l~ 450 (476)
. -+.++++++|.++++++ + .+.|.+++++..
T Consensus 406 ~------~~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~ 438 (463)
T PLN02949 406 A------TTVEEYADAILEVLRMRETERLEIAAAARKRA 438 (463)
T ss_pred C------CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 1 26899999999999853 3 334555555443
No 118
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.59 E-value=0.13 Score=52.88 Aligned_cols=91 Identities=13% Similarity=0.187 Sum_probs=62.1
Q ss_pred CCeEeccccchHHhhccCCccceecc----cCchHHHHHHhcCCcEeeccccchhhhhhhhhcceee-----e-eEEecc
Q 046326 344 AGMVVPSWAPQVHILRHPSTGGFLSH----CGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEET-----G-VAVKPE 413 (476)
Q Consensus 344 ~~~~~~~~~pq~~iL~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~-----G-~G~~l~ 413 (476)
+++.+.+...-..++..+++ +|.- |--+++.||+++|+|+|+... ......+ ++. | .|..++
T Consensus 354 ~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd~----g~~~elv--~~~~~~~~g~~G~lv~ 425 (475)
T cd03813 354 DNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVATDV----GSCRELI--EGADDEALGPAGEVVP 425 (475)
T ss_pred CeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEECCC----CChHHHh--cCCcccccCCceEEEC
Confidence 57888885555678888886 4432 334789999999999999543 3333444 341 2 566665
Q ss_pred ccCCCCCcCHHHHHHHHHHHhcCCh-hHHHHHHHHH
Q 046326 414 TEPGKKVIGREEIERVVRLVMEGEE-GKVMRRRVQE 448 (476)
Q Consensus 414 ~~~~~~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~ 448 (476)
. -+.++++++|.++++|++ .+.+.+++++
T Consensus 426 ~------~d~~~la~ai~~ll~~~~~~~~~~~~a~~ 455 (475)
T cd03813 426 P------ADPEALARAILRLLKDPELRRAMGEAGRK 455 (475)
T ss_pred C------CCHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 4 578999999999999876 3445444443
No 119
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=96.57 E-value=0.4 Score=43.01 Aligned_cols=48 Identities=17% Similarity=0.169 Sum_probs=34.4
Q ss_pred CCeEeccccch---HH-hhccCCccceecccC----chHHHHHHhcCCcEeeccccch
Q 046326 344 AGMVVPSWAPQ---VH-ILRHPSTGGFLSHCG----WNSTLESICHGVPMIAWPLYAE 393 (476)
Q Consensus 344 ~~~~~~~~~pq---~~-iL~~~~~~~~I~HgG----~~s~~eal~~GvP~l~~P~~~D 393 (476)
.|+...+++++ .. ++..+++ +|+-.. .+++.||+.+|+|+|+.+..+.
T Consensus 161 ~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~ 216 (229)
T cd01635 161 DRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGGP 216 (229)
T ss_pred ccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCCc
Confidence 57777787622 22 3333775 666665 6899999999999999877543
No 120
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=96.32 E-value=0.016 Score=56.69 Aligned_cols=110 Identities=19% Similarity=0.324 Sum_probs=76.5
Q ss_pred CCeEeccccchHHh---hccCCccceecc-------cCc------hHHHHHHhcCCcEeeccccchhhhhhhhhcceeee
Q 046326 344 AGMVVPSWAPQVHI---LRHPSTGGFLSH-------CGW------NSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETG 407 (476)
Q Consensus 344 ~~~~~~~~~pq~~i---L~~~~~~~~I~H-------gG~------~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G 407 (476)
+|+...+|+|+.++ |.. +.+.+... +.+ +-+.+.+++|+|+|+.+ +...+..+ ++.+
T Consensus 207 ~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V--~~~~ 279 (333)
T PRK09814 207 ANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFI--VENG 279 (333)
T ss_pred CCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHH--HhCC
Confidence 68999999998765 333 33222221 111 23777899999999964 45677788 8889
Q ss_pred eEEeccccCCCCCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHH
Q 046326 408 VAVKPETEPGKKVIGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGGSSSDSLASFIKK 473 (476)
Q Consensus 408 ~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 473 (476)
+|+.++. .+++.+++.++. +++...|++|+++++++++. |.--.+++.+++..
T Consensus 280 ~G~~v~~--------~~el~~~l~~~~-~~~~~~m~~n~~~~~~~~~~----g~~~~~~~~~~~~~ 332 (333)
T PRK09814 280 LGFVVDS--------LEELPEIIDNIT-EEEYQEMVENVKKISKLLRN----GYFTKKALVDAIKE 332 (333)
T ss_pred ceEEeCC--------HHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHHhc
Confidence 9998743 578999998754 34466799999999999873 55555566666543
No 121
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=96.11 E-value=0.079 Score=54.72 Aligned_cols=102 Identities=10% Similarity=0.105 Sum_probs=66.0
Q ss_pred CCeEeccccchHHhhccCCccceec---ccC-chHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCC
Q 046326 344 AGMVVPSWAPQVHILRHPSTGGFLS---HCG-WNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKK 419 (476)
Q Consensus 344 ~~~~~~~~~pq~~iL~~~~~~~~I~---HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~ 419 (476)
+++...++.+-..++..+++ ||. .=| ..++.||+++|+|+|+.-..+ -+...+ +.-.-|..++.+.+..
T Consensus 376 ~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI--~~g~nG~lv~~~~~~~ 448 (500)
T TIGR02918 376 DYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFI--EDNKNGYLIPIDEEED 448 (500)
T ss_pred CeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHc--cCCCCEEEEeCCcccc
Confidence 56888888887788998886 554 234 368999999999999975421 123344 4433466555200001
Q ss_pred C-cC-HHHHHHHHHHHhcCChhHHHHHHHHHHHHH
Q 046326 420 V-IG-REEIERVVRLVMEGEEGKVMRRRVQELKES 452 (476)
Q Consensus 420 ~-~~-~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~ 452 (476)
+ -+ .++|+++|.++++++....|.+++++.++.
T Consensus 449 d~~~~~~~la~~I~~ll~~~~~~~~~~~a~~~a~~ 483 (500)
T TIGR02918 449 DEDQIITALAEKIVEYFNSNDIDAFHEYSYQIAEG 483 (500)
T ss_pred chhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHh
Confidence 1 12 788999999999644455677777765554
No 122
>PRK10125 putative glycosyl transferase; Provisional
Probab=95.94 E-value=2.1 Score=42.98 Aligned_cols=72 Identities=14% Similarity=0.093 Sum_probs=45.0
Q ss_pred CCeEeccccc-h---HHhhccCCccceecc----cCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEecccc
Q 046326 344 AGMVVPSWAP-Q---VHILRHPSTGGFLSH----CGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETE 415 (476)
Q Consensus 344 ~~~~~~~~~p-q---~~iL~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~ 415 (476)
.++...++.. + ..++..+++ ||.- |--+++.||+++|+|+|+....+ ....+ .. +-|+.++.
T Consensus 286 ~~v~~~g~~~~~~~l~~~y~~aDv--fV~pS~~Egfp~vilEAmA~G~PVVat~~gG----~~Eiv--~~-~~G~lv~~- 355 (405)
T PRK10125 286 GNVVNHGFETDKRKLMSALNQMDA--LVFSSRVDNYPLILCEALSIGVPVIATHSDA----AREVL--QK-SGGKTVSE- 355 (405)
T ss_pred cceEEecCcCCHHHHHHHHHhCCE--EEECCccccCcCHHHHHHHcCCCEEEeCCCC----hHHhE--eC-CcEEEECC-
Confidence 3455455542 2 235666775 6553 33468999999999999997754 22233 33 46877766
Q ss_pred CCCCCcCHHHHHHHH
Q 046326 416 PGKKVIGREEIERVV 430 (476)
Q Consensus 416 ~~~~~~~~~~l~~ai 430 (476)
-+.++|++++
T Consensus 356 -----~d~~~La~~~ 365 (405)
T PRK10125 356 -----EEVLQLAQLS 365 (405)
T ss_pred -----CCHHHHHhcc
Confidence 3567777643
No 123
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=95.90 E-value=0.8 Score=44.31 Aligned_cols=55 Identities=18% Similarity=0.358 Sum_probs=40.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcC-CcEEEEEEccCCcchhhhhhhhhcCCCCce-EEEcC
Q 046326 9 HVAVLPSPGLGHLIPLLEFAKRLVLNH-GVHVSFLVITTNEASAAKNNLLRSLPHGLD-VVDLP 70 (476)
Q Consensus 9 rIll~~~p~~GHi~P~l~La~~L~~rG-~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 70 (476)
||+++-....||+.=+..+.++|+++- +.+|++++.+. .....+..| .++ ++.++
T Consensus 1 ~ILiir~~~iGD~vl~~p~l~~Lr~~~P~a~I~~l~~~~------~~~~~~~~p-~vd~v~~~~ 57 (319)
T TIGR02193 1 RILIVKTSSLGDVIHTLPALTDIKRALPDVEIDWVVEEG------FADIVRLHP-AVDEVIPVA 57 (319)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHhCCCCEEEEEEChh------HhhhhhcCC-CccEEEEec
Confidence 588999999999999999999999983 38999998764 333444444 453 45554
No 124
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.87 E-value=1.6 Score=41.08 Aligned_cols=111 Identities=14% Similarity=0.146 Sum_probs=75.9
Q ss_pred cCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHHHHHH
Q 046326 14 PSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLHAIVE 93 (476)
Q Consensus 14 ~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (476)
=.+-.-|+.-|-.|-++|.++| |+|.+.+-+. . .+.++++.+ |+.+..+.-.. +..+...+.....
T Consensus 6 DI~n~~hvhfFk~lI~elekkG-~ev~iT~rd~--~--~v~~LLd~y--gf~~~~Igk~g-------~~tl~~Kl~~~~e 71 (346)
T COG1817 6 DIGNPPHVHFFKNLIWELEKKG-HEVLITCRDF--G--VVTELLDLY--GFPYKSIGKHG-------GVTLKEKLLESAE 71 (346)
T ss_pred EcCCcchhhHHHHHHHHHHhCC-eEEEEEEeec--C--cHHHHHHHh--CCCeEeecccC-------CccHHHHHHHHHH
Confidence 3445568888999999999999 9999987553 1 133444444 78888776311 1223322333333
Q ss_pred HhhcHHHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEecccHH
Q 046326 94 ESLSKSLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFVTTSVH 142 (476)
Q Consensus 94 ~~~~~~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~~~ 142 (476)
+.. .+..++.++ +||+.|. -..+.+..+|--+|+|.+.+.-+.-.
T Consensus 72 R~~--~L~ki~~~~-kpdv~i~-~~s~~l~rvafgLg~psIi~~D~ehA 116 (346)
T COG1817 72 RVY--KLSKIIAEF-KPDVAIG-KHSPELPRVAFGLGIPSIIFVDNEHA 116 (346)
T ss_pred HHH--HHHHHHhhc-CCceEee-cCCcchhhHHhhcCCceEEecCChhH
Confidence 332 477778888 9999998 55777888999999999998765443
No 125
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=95.78 E-value=2.9 Score=43.34 Aligned_cols=63 Identities=21% Similarity=0.189 Sum_probs=45.4
Q ss_pred CCeEeccccchH-HhhccCCccceecc---cC-chHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccc
Q 046326 344 AGMVVPSWAPQV-HILRHPSTGGFLSH---CG-WNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPET 414 (476)
Q Consensus 344 ~~~~~~~~~pq~-~iL~~~~~~~~I~H---gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~ 414 (476)
+++.+.+|..+. .+|..+++ ||.. -| -+++.||+++|+|+|+... .-+...+ .+-..|..++.
T Consensus 455 d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdv----GG~~EiV--~dG~nG~LVp~ 522 (578)
T PRK15490 455 ERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPA----GGSAECF--IEGVSGFILDD 522 (578)
T ss_pred CcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCC----CCcHHHc--ccCCcEEEECC
Confidence 678888887654 47888886 6643 44 4699999999999998755 2344555 55556777765
No 126
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=95.68 E-value=0.018 Score=48.91 Aligned_cols=95 Identities=17% Similarity=0.166 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHHHHHHHhhcHHHHH
Q 046326 23 PLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLHAIVEESLSKSLKS 102 (476)
Q Consensus 23 P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 102 (476)
-+..|+++|.++| |+|+++++........ ... .++.+..++....... ... .. ... .++.
T Consensus 6 ~~~~l~~~L~~~G-~~V~v~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~------~~~-~~-----~~~-~~~~ 65 (160)
T PF13579_consen 6 YVRELARALAARG-HEVTVVTPQPDPEDDE----EEE--DGVRVHRLPLPRRPWP------LRL-LR-----FLR-RLRR 65 (160)
T ss_dssp HHHHHHHHHHHTT--EEEEEEE---GGG-S----EEE--TTEEEEEE--S-SSSG------GGH-CC-----HHH-HHHH
T ss_pred HHHHHHHHHHHCC-CEEEEEecCCCCcccc----ccc--CCceEEeccCCccchh------hhh-HH-----HHH-HHHH
Confidence 3578999999999 9999999765222111 111 1688877765322211 000 00 112 4555
Q ss_pred HH--HhcCCCCEEEECCCcch-HHHHHH-HcCCCeEEEec
Q 046326 103 VL--TELCNPNALVIDLFCTQ-AFEICS-QLSIPTYSFVT 138 (476)
Q Consensus 103 ~l--~~~~~pDlVI~D~~~~~-~~~~A~-~lgIP~v~~~~ 138 (476)
++ ++. +||+|.+...... ...+++ ..++|++....
T Consensus 66 ~l~~~~~-~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h 104 (160)
T PF13579_consen 66 LLAARRE-RPDVVHAHSPTAGLVAALARRRRGIPLVVTVH 104 (160)
T ss_dssp HCHHCT----SEEEEEHHHHHHHHHHHHHHHT--EEEE-S
T ss_pred HHhhhcc-CCeEEEecccchhHHHHHHHHccCCcEEEEEC
Confidence 55 444 9999997653322 233455 78999987543
No 127
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=95.57 E-value=0.38 Score=47.81 Aligned_cols=78 Identities=15% Similarity=0.115 Sum_probs=52.4
Q ss_pred CCeEeccccchHH---hhccCCcccee-------cccCc-hHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEec
Q 046326 344 AGMVVPSWAPQVH---ILRHPSTGGFL-------SHCGW-NSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKP 412 (476)
Q Consensus 344 ~~~~~~~~~pq~~---iL~~~~~~~~I-------~HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l 412 (476)
+|+...+++|+.. ++.++++ +++ +.++. +.+.|++++|+|+|..++ ...+ +..+ |..+
T Consensus 254 ~nV~~~G~~~~~~l~~~l~~~Dv-~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~--~~~~-~~~~ 322 (373)
T cd04950 254 PNVHYLGPKPYKELPAYLAGFDV-AILPFRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVR--RYED-EVVL 322 (373)
T ss_pred CCEEEeCCCCHHHHHHHHHhCCE-EecCCccchhhhcCCcchHHHHhccCCCEEecCc-------HHHH--hhcC-cEEE
Confidence 7899999998654 6777887 332 22332 469999999999998763 1222 2223 3333
Q ss_pred cccCCCCCcCHHHHHHHHHHHhcCCh
Q 046326 413 ETEPGKKVIGREEIERVVRLVMEGEE 438 (476)
Q Consensus 413 ~~~~~~~~~~~~~l~~ai~~~l~~~~ 438 (476)
.. -+.+++.++|.+++.+++
T Consensus 323 ~~------~d~~~~~~ai~~~l~~~~ 342 (373)
T cd04950 323 IA------DDPEEFVAAIEKALLEDG 342 (373)
T ss_pred eC------CCHHHHHHHHHHHHhcCC
Confidence 33 279999999999876543
No 128
>PRK14098 glycogen synthase; Provisional
Probab=95.25 E-value=0.52 Score=48.63 Aligned_cols=81 Identities=9% Similarity=-0.018 Sum_probs=52.4
Q ss_pred CCeEeccccchH---HhhccCCccceeccc---Cc-hHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccC
Q 046326 344 AGMVVPSWAPQV---HILRHPSTGGFLSHC---GW-NSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEP 416 (476)
Q Consensus 344 ~~~~~~~~~pq~---~iL~~~~~~~~I~Hg---G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~ 416 (476)
+++.+.++++.. .+++.+++ |+.-+ |. .+.+||+++|+|.|+....+-........ ++.+-|..++.
T Consensus 362 ~~V~~~g~~~~~~~~~~~a~aDi--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~--~~~~~G~l~~~-- 435 (489)
T PRK14098 362 EQVSVQTEFTDAFFHLAIAGLDM--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVS--EDKGSGFIFHD-- 435 (489)
T ss_pred CCEEEEEecCHHHHHHHHHhCCE--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCC--CCCCceeEeCC--
Confidence 578777887764 57888886 55432 22 37889999999988876532111110111 22356776654
Q ss_pred CCCCcCHHHHHHHHHHHh
Q 046326 417 GKKVIGREEIERVVRLVM 434 (476)
Q Consensus 417 ~~~~~~~~~l~~ai~~~l 434 (476)
-+++++.++|.+++
T Consensus 436 ----~d~~~la~ai~~~l 449 (489)
T PRK14098 436 ----YTPEALVAKLGEAL 449 (489)
T ss_pred ----CCHHHHHHHHHHHH
Confidence 56899999999876
No 129
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=95.24 E-value=0.38 Score=39.98 Aligned_cols=102 Identities=13% Similarity=0.157 Sum_probs=63.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHH
Q 046326 9 HVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRL 88 (476)
Q Consensus 9 rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (476)
+|++++.....| ...+++.|.++| |+|++++..... ..... ..++.+..++.. . . .... +
T Consensus 1 KIl~i~~~~~~~---~~~~~~~L~~~g-~~V~ii~~~~~~--~~~~~-----~~~i~~~~~~~~----~-k---~~~~-~ 60 (139)
T PF13477_consen 1 KILLIGNTPSTF---IYNLAKELKKRG-YDVHIITPRNDY--EKYEI-----IEGIKVIRLPSP----R-K---SPLN-Y 60 (139)
T ss_pred CEEEEecCcHHH---HHHHHHHHHHCC-CEEEEEEcCCCc--hhhhH-----hCCeEEEEecCC----C-C---ccHH-H
Confidence 477777766666 457799999999 999999986422 11111 117888777532 1 1 1111 1
Q ss_pred HHHHHHhhcHHHHHHHHhcCCCCEEEECCCcch---HHHHHHHcC-CCeEEEe
Q 046326 89 HAIVEESLSKSLKSVLTELCNPNALVIDLFCTQ---AFEICSQLS-IPTYSFV 137 (476)
Q Consensus 89 ~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~---~~~~A~~lg-IP~v~~~ 137 (476)
.. .- .+..++++. +||+|.+...... +..++...+ +|.+...
T Consensus 61 ---~~--~~-~l~k~ik~~-~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~ 106 (139)
T PF13477_consen 61 ---IK--YF-RLRKIIKKE-KPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTV 106 (139)
T ss_pred ---HH--HH-HHHHHhccC-CCCEEEEecCChHHHHHHHHHHHcCCCCEEEEe
Confidence 11 12 578888888 9999987665442 233567788 8888543
No 130
>PHA01633 putative glycosyl transferase group 1
Probab=95.23 E-value=0.92 Score=44.12 Aligned_cols=86 Identities=17% Similarity=0.161 Sum_probs=54.4
Q ss_pred CCeEec---cccchH---HhhccCCccceecc---cCc-hHHHHHHhcCCcEeeccc------cchh------hhhhhhh
Q 046326 344 AGMVVP---SWAPQV---HILRHPSTGGFLSH---CGW-NSTLESICHGVPMIAWPL------YAEQ------RMNAAML 401 (476)
Q Consensus 344 ~~~~~~---~~~pq~---~iL~~~~~~~~I~H---gG~-~s~~eal~~GvP~l~~P~------~~DQ------~~na~~~ 401 (476)
+++... +++++. .++..+++ ||.- =|+ .++.||+++|+|+|+--. .+|+ ..+....
T Consensus 201 ~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~ 278 (335)
T PHA01633 201 ANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEY 278 (335)
T ss_pred CcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHh
Confidence 577776 455543 56778886 6653 243 578999999999998633 2333 2223222
Q ss_pred cceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCC
Q 046326 402 TAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGE 437 (476)
Q Consensus 402 ~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~ 437 (476)
.....|.|..++. .++++++++|.+++...
T Consensus 279 ~~~~~g~g~~~~~------~d~~~la~ai~~~~~~~ 308 (335)
T PHA01633 279 YDKEHGQKWKIHK------FQIEDMANAIILAFELQ 308 (335)
T ss_pred cCcccCceeeecC------CCHHHHHHHHHHHHhcc
Confidence 0013456666543 78999999999986543
No 131
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=95.17 E-value=0.021 Score=44.43 Aligned_cols=53 Identities=9% Similarity=0.131 Sum_probs=43.1
Q ss_pred hhhHhhhccCCCCCcEEEEecCCCCCC---CH--HHHHHHHHHHHhCCCceEEEEecC
Q 046326 256 DEECLAWLDKQPPDSVLFAVPGSGGTL---TA--EQVTEMAWGLEQSKQRFIWVVRMP 308 (476)
Q Consensus 256 ~~~~~~~l~~~~~~~vvyvs~GS~~~~---~~--~~~~~~~~al~~~~~~~i~~~~~~ 308 (476)
+..+..|+...+.++.|+||+||.... .. ..+..++++++..+..+|..+...
T Consensus 27 ~~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~ 84 (97)
T PF06722_consen 27 PAVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAA 84 (97)
T ss_dssp SEEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTC
T ss_pred CCCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHH
Confidence 345677999988889999999998633 22 478889999999999999988754
No 132
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=94.75 E-value=0.39 Score=41.77 Aligned_cols=120 Identities=13% Similarity=0.114 Sum_probs=65.5
Q ss_pred EEcCCCccCHHHHHHHHHHH-HhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHHH
Q 046326 12 VLPSPGLGHLIPLLEFAKRL-VLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLHA 90 (476)
Q Consensus 12 l~~~p~~GHi~P~l~La~~L-~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (476)
++-.++.||..=|+.|.+.+ .++..|+..+++..+......+.+..+.......+..++... . -.+........
T Consensus 2 l~v~gsGGHt~eml~L~~~~~~~~~~~~~~ivt~~d~~S~~k~~~~~~~~~~~~~~~~~~r~r--~---v~q~~~~~~~~ 76 (170)
T PF08660_consen 2 LVVLGSGGHTAEMLRLLKALDNDRYQPRTYIVTEGDKQSRSKAEQLEKSSSKRHKILEIPRAR--E---VGQSYLTSIFT 76 (170)
T ss_pred EEEEcCcHHHHHHHHHHHHhhhhcCCCcEEEEEcCCcccHHHHHHHHHhccccceeeccceEE--E---echhhHhhHHH
Confidence 34557899999999999999 444336666666655444444443333322112344443211 0 01122222333
Q ss_pred HHHHhhcHHHHHHHHhcCCCCEEEECCCcc--hHHHHHHHc------CCCeEEEecc
Q 046326 91 IVEESLSKSLKSVLTELCNPNALVIDLFCT--QAFEICSQL------SIPTYSFVTT 139 (476)
Q Consensus 91 ~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~--~~~~~A~~l------gIP~v~~~~~ 139 (476)
.+..... .+.-+.+ . +||+||+..... +.+.+|..+ |.+.|.+-+.
T Consensus 77 ~l~~~~~-~~~il~r-~-rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES~ 130 (170)
T PF08660_consen 77 TLRAFLQ-SLRILRR-E-RPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIESF 130 (170)
T ss_pred HHHHHHH-HHHHHHH-h-CCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEee
Confidence 3333333 3443333 3 999999764333 344578888 9998887553
No 133
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=94.45 E-value=0.39 Score=49.15 Aligned_cols=123 Identities=18% Similarity=0.269 Sum_probs=77.0
Q ss_pred CcEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCC---CC
Q 046326 269 DSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQRFIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQG---AG 345 (476)
Q Consensus 269 ~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~---~~ 345 (476)
.-+||.+|--....+++.++.-++-|++.+-.++|..+.+.. +. ..|.......| +.
T Consensus 758 d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~---------------ge-----~rf~ty~~~~Gl~p~r 817 (966)
T KOG4626|consen 758 DAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV---------------GE-----QRFRTYAEQLGLEPDR 817 (966)
T ss_pred CeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEecccc---------------ch-----HHHHHHHHHhCCCccc
Confidence 348999998887888999998899999999999999987632 00 11211111100 45
Q ss_pred eEeccccchH-----HhhccCCccceecccCchHHHHHHhcCCcEeeccccchhh-hhhhhhcceeeeeEEeccc
Q 046326 346 MVVPSWAPQV-----HILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLYAEQR-MNAAMLTAEETGVAVKPET 414 (476)
Q Consensus 346 ~~~~~~~pq~-----~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~-~na~~~~~~~~G~G~~l~~ 414 (476)
+++.+-+.-. ..|..-.+.-+.+. |..|.++.|+.|||||.+|.-.--- .-+-.+ ...|+|..+.+
T Consensus 818 iifs~va~k~eHvrr~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll--~~~Gl~hliak 889 (966)
T KOG4626|consen 818 IIFSPVAAKEEHVRRGQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLL--TALGLGHLIAK 889 (966)
T ss_pred eeeccccchHHHHHhhhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHH--HHcccHHHHhh
Confidence 5544433321 12333222225554 6789999999999999999854322 233344 57788875544
No 134
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=94.39 E-value=1.8 Score=43.60 Aligned_cols=85 Identities=14% Similarity=0.172 Sum_probs=55.5
Q ss_pred HhhccCCccceecccCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEe-ccccCCCCCcCHHHHHHHHHHHh
Q 046326 356 HILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVK-PETEPGKKVIGREEIERVVRLVM 434 (476)
Q Consensus 356 ~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~-l~~~~~~~~~~~~~l~~ai~~~l 434 (476)
.+++++++ +|..= .=++.-|+..|||.+.+++. +-....+ +..|.... .+. ..++.++|.+.+.+++
T Consensus 323 ~iIs~~dl--~ig~R-lHa~I~a~~~gvP~i~i~Y~---~K~~~~~--~~lg~~~~~~~~----~~l~~~~Li~~v~~~~ 390 (426)
T PRK10017 323 KILGACEL--TVGTR-LHSAIISMNFGTPAIAINYE---HKSAGIM--QQLGLPEMAIDI----RHLLDGSLQAMVADTL 390 (426)
T ss_pred HHHhhCCE--EEEec-chHHHHHHHcCCCEEEeeeh---HHHHHHH--HHcCCccEEech----hhCCHHHHHHHHHHHH
Confidence 68888885 66432 22466689999999999982 2222333 45566644 455 5789999999999999
Q ss_pred cCCh--hHHHHHHHHHHHHH
Q 046326 435 EGEE--GKVMRRRVQELKES 452 (476)
Q Consensus 435 ~~~~--~~~~~~~a~~l~~~ 452 (476)
++.+ .+.+++++.+++++
T Consensus 391 ~~r~~~~~~l~~~v~~~r~~ 410 (426)
T PRK10017 391 GQLPALNARLAEAVSRERQT 410 (426)
T ss_pred hCHHHHHHHHHHHHHHHHHH
Confidence 8765 23344444444443
No 135
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=92.91 E-value=0.6 Score=47.50 Aligned_cols=135 Identities=19% Similarity=0.188 Sum_probs=84.0
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHh--hhcCCCC
Q 046326 268 PDSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQRFIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQR--TRAQGAG 345 (476)
Q Consensus 268 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~--~~~~~~~ 345 (476)
++-+||+||+......++.+..-+.-|+..+-.++|..+++.+++ ....+ .++.++ +.. .+
T Consensus 428 ~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~--------------~~~~l-~~la~~~Gv~~--eR 490 (620)
T COG3914 428 EDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAE--------------INARL-RDLAEREGVDS--ER 490 (620)
T ss_pred CCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHH--------------HHHHH-HHHHHHcCCCh--hh
Confidence 445999999999988899999888888999999999987753311 00000 111111 112 45
Q ss_pred eEeccccchH---HhhccCCccceec---ccCchHHHHHHhcCCcEeeccccchhhh--hhhhhcceeeeeEEeccccCC
Q 046326 346 MVVPSWAPQV---HILRHPSTGGFLS---HCGWNSTLESICHGVPMIAWPLYAEQRM--NAAMLTAEETGVAVKPETEPG 417 (476)
Q Consensus 346 ~~~~~~~pq~---~iL~~~~~~~~I~---HgG~~s~~eal~~GvP~l~~P~~~DQ~~--na~~~~~~~~G~G~~l~~~~~ 417 (476)
+++.+-.|.. +=+.-+++ |+. -||..|+.|+|..|||+|..+ ++||. |+.-+ +..+|+-..+-.
T Consensus 491 L~f~p~~~~~~h~a~~~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si-~~~agi~e~vA~--- 562 (620)
T COG3914 491 LRFLPPAPNEDHRARYGIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASI-ATNAGIPELVAD--- 562 (620)
T ss_pred eeecCCCCCHHHHHhhchhhe--eeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHH-HHhcCCchhhcC---
Confidence 6665655543 33344554 554 499999999999999999885 67764 33333 245555433322
Q ss_pred CCCcCHHHHHHHH
Q 046326 418 KKVIGREEIERVV 430 (476)
Q Consensus 418 ~~~~~~~~l~~ai 430 (476)
-.++-++.++
T Consensus 563 ---s~~dYV~~av 572 (620)
T COG3914 563 ---SRADYVEKAV 572 (620)
T ss_pred ---CHHHHHHHHH
Confidence 2344455555
No 136
>PHA01630 putative group 1 glycosyl transferase
Probab=92.78 E-value=3.6 Score=40.08 Aligned_cols=110 Identities=8% Similarity=-0.018 Sum_probs=59.6
Q ss_pred ccchH---HhhccCCcccee--cc-cC-chHHHHHHhcCCcEeeccccc--hhh---hhhhhhccee-----------ee
Q 046326 351 WAPQV---HILRHPSTGGFL--SH-CG-WNSTLESICHGVPMIAWPLYA--EQR---MNAAMLTAEE-----------TG 407 (476)
Q Consensus 351 ~~pq~---~iL~~~~~~~~I--~H-gG-~~s~~eal~~GvP~l~~P~~~--DQ~---~na~~~~~~~-----------~G 407 (476)
++|+. .++..+++ || ++ .| -.++.||+++|+|+|+.-..+ |.. .|+..+ +. .+
T Consensus 197 ~v~~~~l~~~y~~aDv--~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv--~~~~~~~~~~~~~~~ 272 (331)
T PHA01630 197 PLPDDDIYSLFAGCDI--LFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWI--KSGRKPKLWYTNPIH 272 (331)
T ss_pred cCCHHHHHHHHHhCCE--EEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEe--eecccccccccCCcc
Confidence 35544 36778886 44 22 33 468999999999999976543 322 222222 11 13
Q ss_pred eEEeccccCCCCCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHhh
Q 046326 408 VAVKPETEPGKKVIGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGGSSSDSLASFIKKCK 475 (476)
Q Consensus 408 ~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 475 (476)
+|..+. .+.+++.+++.+++.|.+-+.++++.+.-+... .+.-+-++.++++.+-++
T Consensus 273 ~G~~v~-------~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~----~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 273 VGYFLD-------PDIEDAYQKLLEALANWTPEKKKENLEGRAILY----RENYSYNAIAKMWEKILE 329 (331)
T ss_pred cccccC-------CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH----HHhCCHHHHHHHHHHHHh
Confidence 454433 256778888888888741011333322222221 234555566666665553
No 137
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=92.26 E-value=1.1 Score=34.20 Aligned_cols=82 Identities=17% Similarity=0.218 Sum_probs=48.3
Q ss_pred ccCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeee-eEEeccccCCCCCcCHHHHHHHHHHHhcCChhHHHHHHHH
Q 046326 369 HCGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETG-VAVKPETEPGKKVIGREEIERVVRLVMEGEEGKVMRRRVQ 447 (476)
Q Consensus 369 HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G-~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~ 447 (476)
+|-..-+.|++++|+|+|.-.. ......+ + .| -++.. . +.+++.++|..+++|+. .+++.
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~--~-~~~~~~~~-------~-~~~el~~~i~~ll~~~~---~~~~i- 69 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIF--E-DGEHIITY-------N-DPEELAEKIEYLLENPE---ERRRI- 69 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHc--C-CCCeEEEE-------C-CHHHHHHHHHHHHCCHH---HHHHH-
Confidence 4445689999999999999865 2222222 1 12 22222 2 79999999999999886 22222
Q ss_pred HHHHHHHHHhccCCChHHHHHHHH
Q 046326 448 ELKESASRELGDGGSSSDSLASFI 471 (476)
Q Consensus 448 ~l~~~~~~~~~~~g~~~~~~~~~~ 471 (476)
++..++-+...-+...-++.|+
T Consensus 70 --a~~a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 70 --AKNARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred --HHHHHHHHHHhCCHHHHHHHHH
Confidence 2222222233455555555554
No 138
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=90.61 E-value=9.5 Score=36.74 Aligned_cols=58 Identities=19% Similarity=0.180 Sum_probs=42.0
Q ss_pred chHHhhccCCccceecccCchHHHHHHhcCCcEeeccccchhhh----hhhhhcceeeeeEEeccc
Q 046326 353 PQVHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLYAEQRM----NAAMLTAEETGVAVKPET 414 (476)
Q Consensus 353 pq~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~----na~~~~~~~~G~G~~l~~ 414 (476)
|+..+|+.++. .|||=--.+-+.||+..|+|+.++|.-. +.. ....+ ++.|+-..+..
T Consensus 221 Py~~~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~-~~~r~~r~~~~L--~~~g~~r~~~~ 282 (311)
T PF06258_consen 221 PYLGFLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPG-RSGRFRRFHQSL--EERGAVRPFTG 282 (311)
T ss_pred cHHHHHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCC-cchHHHHHHHHH--HHCCCEEECCC
Confidence 67788998886 6777777789999999999999999865 211 22334 45566655554
No 139
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=90.16 E-value=1.4 Score=39.33 Aligned_cols=37 Identities=14% Similarity=0.098 Sum_probs=24.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
|||++.-==+. +-.=+.+|+++|++.| |+|+++.|..
T Consensus 1 M~ILlTNDDGi-~a~Gi~aL~~~L~~~g-~~V~VvAP~~ 37 (196)
T PF01975_consen 1 MRILLTNDDGI-DAPGIRALAKALSALG-HDVVVVAPDS 37 (196)
T ss_dssp SEEEEE-SS-T-TSHHHHHHHHHHTTTS-SEEEEEEESS
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhcC-CeEEEEeCCC
Confidence 45555443222 2334678999998888 9999999885
No 140
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=89.04 E-value=4.2 Score=35.25 Aligned_cols=92 Identities=15% Similarity=0.211 Sum_probs=50.7
Q ss_pred hcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHHHHHHH---hhcHHHHHHHHhcC-
Q 046326 33 LNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLHAIVEE---SLSKSLKSVLTELC- 108 (476)
Q Consensus 33 ~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~l~~~~- 108 (476)
++| |+|.+++... +. ... + |++.+.+....... +........+...+.. +.. .+.++-++ .
T Consensus 1 q~g-h~v~fl~~~~--~~-----~~~--~-GV~~~~y~~~~~~~--~~~~~~~~~~e~~~~rg~av~~-a~~~L~~~-Gf 65 (171)
T PF12000_consen 1 QRG-HEVVFLTERK--RP-----PIP--P-GVRVVRYRPPRGPT--PGTHPYVRDFEAAVLRGQAVAR-AARQLRAQ-GF 65 (171)
T ss_pred CCC-CEEEEEecCC--CC-----CCC--C-CcEEEEeCCCCCCC--CCCCcccccHHHHHHHHHHHHH-HHHHHHHc-CC
Confidence 467 9999999542 11 001 2 77777776532211 1111111112222211 122 33333333 4
Q ss_pred CCCEEEECCCcchHHHHHHHc-CCCeEEEecc
Q 046326 109 NPNALVIDLFCTQAFEICSQL-SIPTYSFVTT 139 (476)
Q Consensus 109 ~pDlVI~D~~~~~~~~~A~~l-gIP~v~~~~~ 139 (476)
.||+||...-...++.+-+.+ ++|.+.++=.
T Consensus 66 ~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~E~ 97 (171)
T PF12000_consen 66 VPDVIIAHPGWGETLFLKDVFPDAPLIGYFEF 97 (171)
T ss_pred CCCEEEEcCCcchhhhHHHhCCCCcEEEEEEE
Confidence 999999998766677788888 8999887653
No 141
>PLN02939 transferase, transferring glycosyl groups
Probab=88.15 E-value=7.7 Score=42.86 Aligned_cols=82 Identities=10% Similarity=0.095 Sum_probs=52.9
Q ss_pred CCeEeccccchH---HhhccCCccceecc-----cCchHHHHHHhcCCcEeeccccc--hhhhh--hhhhcceeeeeEEe
Q 046326 344 AGMVVPSWAPQV---HILRHPSTGGFLSH-----CGWNSTLESICHGVPMIAWPLYA--EQRMN--AAMLTAEETGVAVK 411 (476)
Q Consensus 344 ~~~~~~~~~pq~---~iL~~~~~~~~I~H-----gG~~s~~eal~~GvP~l~~P~~~--DQ~~n--a~~~~~~~~G~G~~ 411 (476)
++|.+.++.+.. .+++.+++ ||.- || .+.+||++||+|.|+....+ |...+ ...+ .+.-+-|..
T Consensus 837 drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfG-LvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i-~~eg~NGfL 912 (977)
T PLN02939 837 NNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCG-LTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETI-PVELRNGFT 912 (977)
T ss_pred CeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCc-HHHHHHHHCCCCEEEecCCCCcceeecCCcccc-ccCCCceEE
Confidence 468777887764 47888886 6643 34 57999999999999876543 22211 1111 012245666
Q ss_pred ccccCCCCCcCHHHHHHHHHHHhc
Q 046326 412 PETEPGKKVIGREEIERVVRLVME 435 (476)
Q Consensus 412 l~~~~~~~~~~~~~l~~ai~~~l~ 435 (476)
+.. -++++|.++|.+++.
T Consensus 913 f~~------~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 913 FLT------PDEQGLNSALERAFN 930 (977)
T ss_pred ecC------CCHHHHHHHHHHHHH
Confidence 554 478889999988764
No 142
>PRK05986 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase; Validated
Probab=87.71 E-value=14 Score=32.75 Aligned_cols=107 Identities=17% Similarity=0.088 Sum_probs=66.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCch
Q 046326 5 SLQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPV 84 (476)
Q Consensus 5 ~~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (476)
+.+-.|.+++..+.|-....+.+|-+...+| +.|.++-.-......--...++.++ ++.++..+....-. . .+.
T Consensus 20 ~~~g~v~v~~g~GkGKtt~a~g~a~ra~g~G-~~V~ivQFlKg~~~~GE~~~l~~l~-~v~~~~~g~~~~~~--~--~~~ 93 (191)
T PRK05986 20 EEKGLLIVHTGNGKGKSTAAFGMALRAVGHG-KKVGVVQFIKGAWSTGERNLLEFGG-GVEFHVMGTGFTWE--T--QDR 93 (191)
T ss_pred ccCCeEEEECCCCCChHHHHHHHHHHHHHCC-CeEEEEEEecCCCccCHHHHHhcCC-CcEEEECCCCCccc--C--CCc
Confidence 4567899999999999999999999999999 9999987543110111112233344 78888877531111 1 111
Q ss_pred HHHHHHHHHHhhcHHHHHHHHhcCCCCEEEECCCcc
Q 046326 85 VTRLHAIVEESLSKSLKSVLTELCNPNALVIDLFCT 120 (476)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~ 120 (476)
.. -......... ..++.+.+- ++|+||.|....
T Consensus 94 ~e-~~~~~~~~~~-~a~~~l~~~-~ydlvVLDEi~~ 126 (191)
T PRK05986 94 ER-DIAAAREGWE-EAKRMLADE-SYDLVVLDELTY 126 (191)
T ss_pred HH-HHHHHHHHHH-HHHHHHhCC-CCCEEEEehhhH
Confidence 11 1122223333 455555554 999999998644
No 143
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=87.03 E-value=3.5 Score=35.13 Aligned_cols=101 Identities=10% Similarity=0.051 Sum_probs=50.6
Q ss_pred CccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHHHHHHHhh
Q 046326 17 GLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLHAIVEESL 96 (476)
Q Consensus 17 ~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (476)
..|==.-+..|+++|+++| |+|++++....... .. . ........ .. .........+. ..
T Consensus 11 ~GG~e~~~~~l~~~l~~~G-~~v~v~~~~~~~~~--~~--------~-~~~~~~~~--~~--~~~~~~~~~~~-----~~ 69 (177)
T PF13439_consen 11 IGGAERVVLNLARALAKRG-HEVTVVSPGVKDPI--EE--------E-LVKIFVKI--PY--PIRKRFLRSFF-----FM 69 (177)
T ss_dssp SSHHHHHHHHHHHHHHHTT--EEEEEESS-TTS---SS--------T-EEEE---T--T---SSTSS--HHHH-----HH
T ss_pred CChHHHHHHHHHHHHHHCC-CEEEEEEcCCCccc--hh--------h-ccceeeee--ec--ccccccchhHH-----HH
Confidence 4566677899999999999 99999987631111 00 1 00111100 00 00111111111 12
Q ss_pred cHHHHHHHHhcCCCCEEEECCCcc-hHHHHHHHcCCCeEEEecccH
Q 046326 97 SKSLKSVLTELCNPNALVIDLFCT-QAFEICSQLSIPTYSFVTTSV 141 (476)
Q Consensus 97 ~~~l~~~l~~~~~pDlVI~D~~~~-~~~~~A~~lgIP~v~~~~~~~ 141 (476)
. .+..++++. +||+|-...... +....+-. ++|.+...-...
T Consensus 70 ~-~~~~~i~~~-~~DiVh~~~~~~~~~~~~~~~-~~~~v~~~H~~~ 112 (177)
T PF13439_consen 70 R-RLRRLIKKE-KPDIVHIHGPPAFWIALLACR-KVPIVYTIHGPY 112 (177)
T ss_dssp H-HHHHHHHHH-T-SEEECCTTHCCCHHHHHHH-CSCEEEEE-HHH
T ss_pred H-HHHHHHHHc-CCCeEEecccchhHHHHHhcc-CCCEEEEeCCCc
Confidence 3 677788888 999995443332 33333333 999888765443
No 144
>cd00561 CobA_CobO_BtuR ATP:corrinoid adenosyltransferase BtuR/CobO/CobP. This family consists of the BtuR, CobO, CobP proteins all of which are Cob(I)alamin (vitamin B12) adenosyltransferase, which is involved in cobalamin (vitamin B12) biosynthesis. This enzyme is a homodimer, which catalyzes the adenosylation reaction: ATP + cob(I)alamin + H2O <= phosphate + diphosphate + adenosylcobalamin.
Probab=86.93 E-value=18 Score=31.03 Aligned_cols=103 Identities=14% Similarity=0.085 Sum_probs=62.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCc-chhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHH
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNE-ASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVT 86 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (476)
.-|-+++.++.|-.+..+.+|-+...+| ++|.++-.-... ... -....+.++ ++.+...+....-. . .+...
T Consensus 3 G~i~vy~g~G~Gkt~~a~g~~~ra~~~g-~~v~~vQFlKg~~~~g-E~~~l~~l~-~v~~~~~g~~~~~~---~-~~~~~ 75 (159)
T cd00561 3 GLIQVYTGNGKGKTTAALGLALRALGHG-YRVGVVQFLKGGWKYG-ELKALERLP-NIEIHRMGRGFFWT---T-ENDEE 75 (159)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCC-CeEEEEEEeCCCCccC-HHHHHHhCC-CcEEEECCCCCccC---C-CChHH
Confidence 3578889999999999999999999998 999996543211 111 112334445 78888877532111 1 11111
Q ss_pred HHHHHHHHhhcHHHHHHHHhcCCCCEEEECCCcc
Q 046326 87 RLHAIVEESLSKSLKSVLTELCNPNALVIDLFCT 120 (476)
Q Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~ 120 (476)
-......... ..++.+..- ++|+||.|....
T Consensus 76 -~~~~a~~~~~-~a~~~~~~~-~~dLlVLDEi~~ 106 (159)
T cd00561 76 -DIAAAAEGWA-FAKEAIASG-EYDLVILDEINY 106 (159)
T ss_pred -HHHHHHHHHH-HHHHHHhcC-CCCEEEEechHh
Confidence 1122223333 455555555 999999998654
No 145
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=86.71 E-value=2.3 Score=44.20 Aligned_cols=91 Identities=10% Similarity=0.161 Sum_probs=65.4
Q ss_pred CeEeccccc--h-HHhhccCCccceeccc---CchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCC
Q 046326 345 GMVVPSWAP--Q-VHILRHPSTGGFLSHC---GWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGK 418 (476)
Q Consensus 345 ~~~~~~~~p--q-~~iL~~~~~~~~I~Hg---G~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~ 418 (476)
.+.+.++.. + ..++.+..+ +|.=+ |.++..||+.+|+|+| .+.....| +...=|.-+.
T Consensus 410 ~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V--~d~~NG~li~----- 473 (519)
T TIGR03713 410 RIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYV--EHNKNGYIID----- 473 (519)
T ss_pred EEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceee--EcCCCcEEeC-----
Confidence 577778777 4 357778876 66654 6779999999999999 33344455 4444455543
Q ss_pred CCcCHHHHHHHHHHHhcCCh-hHHHHHHHHHHHHHHH
Q 046326 419 KVIGREEIERVVRLVMEGEE-GKVMRRRVQELKESAS 454 (476)
Q Consensus 419 ~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~ 454 (476)
+.++|.++|..+|.+.+ +..+...+-+.+++..
T Consensus 474 ---d~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS 507 (519)
T TIGR03713 474 ---DISELLKALDYYLDNLKNWNYSLAYSIKLIDDYS 507 (519)
T ss_pred ---CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh
Confidence 47899999999999886 6667777777666543
No 146
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=86.54 E-value=4.3 Score=35.82 Aligned_cols=101 Identities=17% Similarity=0.227 Sum_probs=49.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhc--CCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHH
Q 046326 9 HVAVLPSPGLGHLIPLLEFAKRLVLN--HGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVT 86 (476)
Q Consensus 9 rIll~~~p~~GHi~P~l~La~~L~~r--G~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (476)
.++-+-..+-|-++-...|+++|.++ | +.|.+.+.+. .......+.. ++.+...-+|. +. .
T Consensus 22 ~~iWiHa~SvGE~~a~~~Li~~l~~~~p~-~~illT~~T~-tg~~~~~~~~---~~~v~~~~~P~----D~-------~- 84 (186)
T PF04413_consen 22 PLIWIHAASVGEVNAARPLIKRLRKQRPD-LRILLTTTTP-TGREMARKLL---PDRVDVQYLPL----DF-------P- 84 (186)
T ss_dssp T-EEEE-SSHHHHHHHHHHHHHHTT---T-S-EEEEES-C-CHHHHHHGG----GGG-SEEE-------SS-------H-
T ss_pred CcEEEEECCHHHHHHHHHHHHHHHHhCCC-CeEEEEecCC-chHHHHHHhC---CCCeEEEEeCc----cC-------H-
Confidence 34445566899999999999999997 5 8888887653 2222222221 11222222321 11 1
Q ss_pred HHHHHHHHhhcHHHHHHHHhcCCCCEEEE-CCCcchHH-HHHHHcCCCeEEEec
Q 046326 87 RLHAIVEESLSKSLKSVLTELCNPNALVI-DLFCTQAF-EICSQLSIPTYSFVT 138 (476)
Q Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~~pDlVI~-D~~~~~~~-~~A~~lgIP~v~~~~ 138 (476)
..++..++.+ +||++|. +.-.+... ..|++.|||.+++..
T Consensus 85 -----------~~~~rfl~~~-~P~~~i~~EtElWPnll~~a~~~~ip~~LvNa 126 (186)
T PF04413_consen 85 -----------WAVRRFLDHW-RPDLLIWVETELWPNLLREAKRRGIPVVLVNA 126 (186)
T ss_dssp -----------HHHHHHHHHH---SEEEEES----HHHHHH-----S-EEEEEE
T ss_pred -----------HHHHHHHHHh-CCCEEEEEccccCHHHHHHHhhcCCCEEEEee
Confidence 1567778888 9999884 43333333 388899999999765
No 147
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=85.48 E-value=8.4 Score=35.86 Aligned_cols=106 Identities=13% Similarity=0.130 Sum_probs=60.8
Q ss_pred CCccCHHHH----HHHHHHHHhcC-CcEEEEEEccCCcch--hhhhhhhhcCCCCce-EEEcCCCCCCCCCCCCCchHHH
Q 046326 16 PGLGHLIPL----LEFAKRLVLNH-GVHVSFLVITTNEAS--AAKNNLLRSLPHGLD-VVDLPPVDVSAVTSDDMPVVTR 87 (476)
Q Consensus 16 p~~GHi~P~----l~La~~L~~rG-~h~V~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 87 (476)
+...-+||+ +..|-+|++++ +.+|++++..++... ..+++.++. |.+ -+-+... .+ .+.+...
T Consensus 29 ~~~~~iN~~D~~AlE~Alrlke~~~g~~Vtvvs~Gp~~a~~~~~lr~aLAm---GaD~avli~d~---~~--~g~D~~~- 99 (256)
T PRK03359 29 KADAKISQYDLNAIEAACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSR---GPDELIVVIDD---QF--EQALPQQ- 99 (256)
T ss_pred CCccccChhhHHHHHHHHHHhhhcCCCEEEEEEECCcchhhHHHHHHHHHc---CCCEEEEEecC---cc--cCcCHHH-
Confidence 334446664 77888888874 269999998764422 334443332 211 2222211 11 1112111
Q ss_pred HHHHHHHhhcHHHHHHHHhcCCCCEEEECCCc------chHHHHHHHcCCCeEEEecc
Q 046326 88 LHAIVEESLSKSLKSVLTELCNPNALVIDLFC------TQAFEICSQLSIPTYSFVTT 139 (476)
Q Consensus 88 ~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~------~~~~~~A~~lgIP~v~~~~~ 139 (476)
... .+...+++. +||+|++...+ .-+..+|+.||+|++++...
T Consensus 100 -------tA~-~La~ai~~~-~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~ 148 (256)
T PRK03359 100 -------TAS-ALAAAAQKA-GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSK 148 (256)
T ss_pred -------HHH-HHHHHHHHh-CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEE
Confidence 112 567777778 99999974322 23456999999999987663
No 148
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=84.62 E-value=41 Score=32.75 Aligned_cols=106 Identities=12% Similarity=0.063 Sum_probs=63.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcC-CcEEEEEEccCCcchhhhhhhhhcCCCCce-EEEcCCCCCCCCCCCCCchHH
Q 046326 9 HVAVLPSPGLGHLIPLLEFAKRLVLNH-GVHVSFLVITTNEASAAKNNLLRSLPHGLD-VVDLPPVDVSAVTSDDMPVVT 86 (476)
Q Consensus 9 rIll~~~p~~GHi~P~l~La~~L~~rG-~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 86 (476)
||+++-....||+.=...+.+.|+++- +.+|++++.+. .....+..| .++ ++.++..... ....
T Consensus 1 rILii~~~~iGD~vl~tp~l~~Lk~~~P~a~I~~l~~~~------~~~l~~~~p-~vd~vi~~~~~~~~-------~~~~ 66 (344)
T TIGR02201 1 RILLIKLRHHGDMLLTTPVISSLKKNYPDAKIDVLLYQE------TIPILSENP-DINALYGLDRKKAK-------AGER 66 (344)
T ss_pred CEEEEEeccccceeeHHHHHHHHHHHCCCCEEEEEECcC------hHHHHhcCC-CccEEEEeChhhhc-------chHH
Confidence 689999999999999999999999973 37899998763 233444444 443 3444321000 0000
Q ss_pred HHHHHHHHhhcHHHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEE
Q 046326 87 RLHAIVEESLSKSLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYS 135 (476)
Q Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~ 135 (476)
.+... . .+...+++. ++|++|.-........++...|.|.-+
T Consensus 67 ~~~~~----~--~l~~~lr~~-~yD~vidl~~~~~s~ll~~l~~a~~ri 108 (344)
T TIGR02201 67 KLANQ----F--HLIKVLRAN-RYDLVVNLTDQWMVAILVKLLNARVKI 108 (344)
T ss_pred HHHHH----H--HHHHHHHhC-CCCEEEECCcchHHHHHHHhcCCCeEE
Confidence 01111 1 222334445 999999543334455678888888654
No 149
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=84.55 E-value=3.8 Score=34.17 Aligned_cols=61 Identities=11% Similarity=-0.043 Sum_probs=46.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcC
Q 046326 5 SLQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLP 70 (476)
Q Consensus 5 ~~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (476)
|++.+|++.+.+.-+|-.-..-++..|+.+| ++|+++....|.. .+.+.+... +.+++.+.
T Consensus 1 ~~~~~vl~~~~~gD~H~lG~~iv~~~lr~~G-~eVi~LG~~vp~e--~i~~~a~~~--~~d~V~lS 61 (137)
T PRK02261 1 MKKKTVVLGVIGADCHAVGNKILDRALTEAG-FEVINLGVMTSQE--EFIDAAIET--DADAILVS 61 (137)
T ss_pred CCCCEEEEEeCCCChhHHHHHHHHHHHHHCC-CEEEECCCCCCHH--HHHHHHHHc--CCCEEEEc
Confidence 5789999999999999999999999999999 9999998765322 233333333 45666664
No 150
>PRK14099 glycogen synthase; Provisional
Probab=82.75 E-value=39 Score=34.91 Aligned_cols=38 Identities=24% Similarity=0.157 Sum_probs=30.6
Q ss_pred CCCCEEEEEcC--------CCccCHHHHHHHHHHHHhcCCcEEEEEEcc
Q 046326 5 SLQPHVAVLPS--------PGLGHLIPLLEFAKRLVLNHGVHVSFLVIT 45 (476)
Q Consensus 5 ~~~~rIll~~~--------p~~GHi~P~l~La~~L~~rG~h~V~~~~~~ 45 (476)
|++|||++++. |+.|++ .-+|.++|+++| |+|.++.|.
T Consensus 1 ~~~~~il~v~~E~~p~~k~ggl~dv--~~~lp~~l~~~g-~~v~v~~P~ 46 (485)
T PRK14099 1 MTPLRVLSVASEIFPLIKTGGLADV--AGALPAALKAHG-VEVRTLVPG 46 (485)
T ss_pred CCCcEEEEEEeccccccCCCcHHHH--HHHHHHHHHHCC-CcEEEEeCC
Confidence 46899999875 455555 557889999999 999999986
No 151
>PRK12342 hypothetical protein; Provisional
Probab=82.33 E-value=19 Score=33.48 Aligned_cols=104 Identities=11% Similarity=0.170 Sum_probs=58.6
Q ss_pred CccCHHHH----HHHHHHHHhcCCcEEEEEEccCCcc-hh-hhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHHH
Q 046326 17 GLGHLIPL----LEFAKRLVLNHGVHVSFLVITTNEA-SA-AKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLHA 90 (476)
Q Consensus 17 ~~GHi~P~----l~La~~L~~rG~h~V~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (476)
...-+||+ +..|-+|++.| .+|++++..++.. .. ..++.+..-. -+-+-+... .+ .+.+...
T Consensus 29 ~~~~iNp~D~~AlE~AlrLk~~g-~~Vtvls~Gp~~a~~~~l~r~alamGa--D~avli~d~---~~--~g~D~~a---- 96 (254)
T PRK12342 29 AEAKISQFDLNAIEAASQLATDG-DEIAALTVGGSLLQNSKVRKDVLSRGP--HSLYLVQDA---QL--EHALPLD---- 96 (254)
T ss_pred CCccCChhhHHHHHHHHHHhhcC-CEEEEEEeCCChHhHHHHHHHHHHcCC--CEEEEEecC---cc--CCCCHHH----
Confidence 33446664 67778888777 8999998876432 22 2233322211 112222211 11 1112211
Q ss_pred HHHHhhcHHHHHHHHhcCCCCEEEECCCcc------hHHHHHHHcCCCeEEEec
Q 046326 91 IVEESLSKSLKSVLTELCNPNALVIDLFCT------QAFEICSQLSIPTYSFVT 138 (476)
Q Consensus 91 ~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~------~~~~~A~~lgIP~v~~~~ 138 (476)
... .+...+++. +||+|++...+. -+..+|+.||+|++.+..
T Consensus 97 ----ta~-~La~~i~~~-~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~ 144 (254)
T PRK12342 97 ----TAK-ALAAAIEKI-GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVS 144 (254)
T ss_pred ----HHH-HHHHHHHHh-CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEE
Confidence 112 566777778 999999743332 355699999999998765
No 152
>COG2109 BtuR ATP:corrinoid adenosyltransferase [Coenzyme metabolism]
Probab=81.64 E-value=34 Score=30.07 Aligned_cols=104 Identities=13% Similarity=0.124 Sum_probs=59.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC-C--cchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCC
Q 046326 6 LQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT-N--EASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDM 82 (476)
Q Consensus 6 ~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (476)
.+.=|.+++..+.|-....+.+|-+-.-+| .+|.++-.-. + ..+. .....++..+.|+.++.... .+..
T Consensus 27 ~~Gli~V~TG~GKGKTTAAlG~alRa~GhG-~rv~vvQFiKg~~~~GE~---~~~~~~~~~v~~~~~~~g~t----w~~~ 98 (198)
T COG2109 27 EKGLIIVFTGNGKGKTTAALGLALRALGHG-LRVGVVQFIKGGWKYGEE---AALEKFGLGVEFHGMGEGFT----WETQ 98 (198)
T ss_pred ccCeEEEEecCCCChhHHHHHHHHHHhcCC-CEEEEEEEeecCcchhHH---HHHHhhccceeEEecCCcee----CCCc
Confidence 344578889999999888777776666666 7777765332 1 1111 11122222688988884322 2222
Q ss_pred chHHHHHHHHHHhhcHHHHHHHHhcCCCCEEEECCCcc
Q 046326 83 PVVTRLHAIVEESLSKSLKSVLTELCNPNALVIDLFCT 120 (476)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~ 120 (476)
+..... ......-. ..++++.+- ++|+||.|.+.+
T Consensus 99 ~~~~d~-~aa~~~w~-~a~~~l~~~-~ydlviLDEl~~ 133 (198)
T COG2109 99 DREADI-AAAKAGWE-HAKEALADG-KYDLVILDELNY 133 (198)
T ss_pred CcHHHH-HHHHHHHH-HHHHHHhCC-CCCEEEEehhhH
Confidence 221122 22333333 556666665 999999998654
No 153
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=81.08 E-value=18 Score=34.98 Aligned_cols=42 Identities=12% Similarity=0.147 Sum_probs=35.0
Q ss_pred CCEEEEEcC-CCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcc
Q 046326 7 QPHVAVLPS-PGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEA 49 (476)
Q Consensus 7 ~~rIll~~~-p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~ 49 (476)
++||++++. |+-|-..-..++|-.|++.| +.|.++++++..+
T Consensus 1 ~~riv~f~GKGGVGKTT~aaA~A~~lA~~g-~kvLlvStDPAhs 43 (322)
T COG0003 1 MTRIVFFTGKGGVGKTTIAAATAVKLAESG-KKVLLVSTDPAHS 43 (322)
T ss_pred CcEEEEEecCCcccHHHHHHHHHHHHHHcC-CcEEEEEeCCCCc
Confidence 368888888 78899999999999999999 9988887776333
No 154
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=80.04 E-value=20 Score=32.12 Aligned_cols=146 Identities=9% Similarity=0.006 Sum_probs=75.9
Q ss_pred CcEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCCeEe
Q 046326 269 DSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQRFIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVV 348 (476)
Q Consensus 269 ~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ 348 (476)
+.++.|+.|.++ ...++.|...+..+.++. .. ..+.+.+.... ..+..
T Consensus 11 k~vLVIGgG~va-------~~ka~~Ll~~ga~V~VIs-~~----------------------~~~~l~~l~~~--~~i~~ 58 (202)
T PRK06718 11 KRVVIVGGGKVA-------GRRAITLLKYGAHIVVIS-PE----------------------LTENLVKLVEE--GKIRW 58 (202)
T ss_pred CEEEEECCCHHH-------HHHHHHHHHCCCeEEEEc-CC----------------------CCHHHHHHHhC--CCEEE
Confidence 348888777765 335566666776665543 21 11222222222 23443
Q ss_pred ccccchHHhhccCCccceecccCchHHHHHHh----cCCcEeeccccchhhh-----hhhhhcceeeeeEEeccccCCCC
Q 046326 349 PSWAPQVHILRHPSTGGFLSHCGWNSTLESIC----HGVPMIAWPLYAEQRM-----NAAMLTAEETGVAVKPETEPGKK 419 (476)
Q Consensus 349 ~~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~----~GvP~l~~P~~~DQ~~-----na~~~~~~~~G~G~~l~~~~~~~ 419 (476)
.....+..-+..+++ +|.--+.-.+.+.++ .++++-+ .|.+. .-..+ .+-++-+.+.. .+..
T Consensus 59 ~~~~~~~~~l~~adl--ViaaT~d~elN~~i~~~a~~~~lvn~----~d~~~~~~f~~Pa~~--~~g~l~iaIsT-~G~s 129 (202)
T PRK06718 59 KQKEFEPSDIVDAFL--VIAATNDPRVNEQVKEDLPENALFNV----ITDAESGNVVFPSAL--HRGKLTISVST-DGAS 129 (202)
T ss_pred EecCCChhhcCCceE--EEEcCCCHHHHHHHHHHHHhCCcEEE----CCCCccCeEEEeeEE--EcCCeEEEEEC-CCCC
Confidence 333334455677775 777767666665554 4554433 34433 33334 44445555555 1112
Q ss_pred CcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHH
Q 046326 420 VIGREEIERVVRLVMEGEEGKVMRRRVQELKESASRE 456 (476)
Q Consensus 420 ~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~ 456 (476)
-.-+..|++.|.+++. ++...+-+.+.++++.+++.
T Consensus 130 P~la~~lr~~ie~~~~-~~~~~~~~~~~~~R~~~k~~ 165 (202)
T PRK06718 130 PKLAKKIRDELEALYD-ESYESYIDFLYECRQKIKEL 165 (202)
T ss_pred hHHHHHHHHHHHHHcc-hhHHHHHHHHHHHHHHHHHh
Confidence 2333557777777663 34445667777777777654
No 155
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=79.58 E-value=8.1 Score=35.61 Aligned_cols=97 Identities=16% Similarity=0.221 Sum_probs=51.9
Q ss_pred HHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCC--CCCCCCCCCchHHHHHHHHHHhhcHHHH
Q 046326 24 LLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVD--VSAVTSDDMPVVTRLHAIVEESLSKSLK 101 (476)
Q Consensus 24 ~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 101 (476)
+-+|++.|+ .+ ++|+++.|.. +.+-....+.-. ..++...+.... ..+. | . ....- .+.
T Consensus 16 i~aL~~al~-~~-~dV~VVAP~~--~qSg~s~slTl~-~Plr~~~~~~~~~av~GT-P------a------DCV~l-al~ 76 (252)
T COG0496 16 IRALARALR-EG-ADVTVVAPDR--EQSGASHSLTLH-EPLRVRQVDNGAYAVNGT-P------A------DCVIL-GLN 76 (252)
T ss_pred HHHHHHHHh-hC-CCEEEEccCC--CCcccccccccc-cCceeeEeccceEEecCC-h------H------HHHHH-HHH
Confidence 457888888 87 9999999884 322111111111 023333332100 0111 1 1 11112 677
Q ss_pred HHHHhcCCCCEEEE----------CCCcchHH---HHHHHcCCCeEEEeccc
Q 046326 102 SVLTELCNPNALVI----------DLFCTQAF---EICSQLSIPTYSFVTTS 140 (476)
Q Consensus 102 ~~l~~~~~pDlVI~----------D~~~~~~~---~~A~~lgIP~v~~~~~~ 140 (476)
.++++. .||+||+ |...+..+ .=|..+|||.|.++...
T Consensus 77 ~l~~~~-~pDLVvSGIN~G~Nlg~dv~ySGTVaaA~Ea~~~GipsIA~S~~~ 127 (252)
T COG0496 77 ELLKEP-RPDLVVSGINAGANLGDDVIYSGTVAAAMEAALLGIPAIAISLAY 127 (252)
T ss_pred HhccCC-CCCEEEeCccCCCccccceeeeehHHHHHHHHHcCccceeeeehh
Confidence 777776 8999997 33333322 23577999999987643
No 156
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=78.98 E-value=71 Score=32.48 Aligned_cols=89 Identities=7% Similarity=0.060 Sum_probs=60.6
Q ss_pred CCeEeccccc-h-HHhhccCCccceecccC--chHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCC
Q 046326 344 AGMVVPSWAP-Q-VHILRHPSTGGFLSHCG--WNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKK 419 (476)
Q Consensus 344 ~~~~~~~~~p-q-~~iL~~~~~~~~I~HgG--~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~ 419 (476)
+.++..++.+ + ..++..+++=+-|+||. ..++.||+.+|+|++..=.. .-+...+ .. |.....
T Consensus 329 nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t---~~~~~~i--~~---g~l~~~----- 395 (438)
T TIGR02919 329 NVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEET---AHNRDFI--AS---ENIFEH----- 395 (438)
T ss_pred CcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecc---cCCcccc--cC---CceecC-----
Confidence 3445556677 3 36999999878888876 47999999999999987332 2222333 23 444433
Q ss_pred CcCHHHHHHHHHHHhcCChhHHHHHHHHH
Q 046326 420 VIGREEIERVVRLVMEGEEGKVMRRRVQE 448 (476)
Q Consensus 420 ~~~~~~l~~ai~~~l~~~~~~~~~~~a~~ 448 (476)
-+.+++.++|.++|.+++ .++++...
T Consensus 396 -~~~~~m~~~i~~lL~d~~--~~~~~~~~ 421 (438)
T TIGR02919 396 -NEVDQLISKLKDLLNDPN--QFRELLEQ 421 (438)
T ss_pred -CCHHHHHHHHHHHhcCHH--HHHHHHHH
Confidence 458999999999999875 14444433
No 157
>PF07355 GRDB: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); InterPro: IPR022787 This entry represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. All members are expected to contain an internal UGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon. ; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=78.52 E-value=19 Score=34.80 Aligned_cols=43 Identities=19% Similarity=0.350 Sum_probs=30.9
Q ss_pred HHhhcHHHHHHHHhcCCCCEEEECCCcc-------hH---HHHHHHcCCCeEEEe
Q 046326 93 EESLSKSLKSVLTELCNPNALVIDLFCT-------QA---FEICSQLSIPTYSFV 137 (476)
Q Consensus 93 ~~~~~~~l~~~l~~~~~pDlVI~D~~~~-------~~---~~~A~~lgIP~v~~~ 137 (476)
..... .+.++++++ +||++|+.+.+- |+ ..+.++++||.++-.
T Consensus 66 eea~~-~i~~mv~~~-~pD~viaGPaFnagrYG~acg~v~~aV~e~~~IP~vtaM 118 (349)
T PF07355_consen 66 EEALK-KILEMVKKL-KPDVVIAGPAFNAGRYGVACGEVAKAVQEKLGIPVVTAM 118 (349)
T ss_pred HHHHH-HHHHHHHhc-CCCEEEEcCCcCCchHHHHHHHHHHHHHHhhCCCEEEEe
Confidence 34445 788889988 999999987653 11 125678999999743
No 158
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=76.48 E-value=15 Score=37.50 Aligned_cols=103 Identities=11% Similarity=0.053 Sum_probs=66.1
Q ss_pred cccchHH---hhccCCccceec---ccCc-hHHHHHHhcCCc----EeeccccchhhhhhhhhcceeeeeEEeccccCCC
Q 046326 350 SWAPQVH---ILRHPSTGGFLS---HCGW-NSTLESICHGVP----MIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGK 418 (476)
Q Consensus 350 ~~~pq~~---iL~~~~~~~~I~---HgG~-~s~~eal~~GvP----~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~ 418 (476)
+.+++.+ ++..+++ |+. +=|. .+..||+++|+| +|+--+.+- +..+ +-|+.++.
T Consensus 342 ~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~----~~~l-----~~gllVnP---- 406 (456)
T TIGR02400 342 RSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGA----AQEL-----NGALLVNP---- 406 (456)
T ss_pred CCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCC----hHHh-----CCcEEECC----
Confidence 4455544 5677786 443 3465 588899999999 666544332 2223 23555555
Q ss_pred CCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHhh
Q 046326 419 KVIGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGGSSSDSLASFIKKCK 475 (476)
Q Consensus 419 ~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 475 (476)
.+.++++++|.++++.+. +..+++.+++.+.+. .-+...-.++++++|.
T Consensus 407 --~d~~~lA~aI~~aL~~~~-~er~~r~~~~~~~v~-----~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 407 --YDIDGMADAIARALTMPL-EEREERHRAMMDKLR-----KNDVQRWREDFLSDLN 455 (456)
T ss_pred --CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHh-----hCCHHHHHHHHHHHhh
Confidence 578999999999998653 124555555555543 3567777888888774
No 159
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=75.95 E-value=7 Score=31.46 Aligned_cols=37 Identities=24% Similarity=0.107 Sum_probs=33.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 9 HVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 9 rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
||++.+.+...|-....-++..|+.+| ++|.......
T Consensus 1 ~vl~~~~~~e~H~lG~~~~~~~l~~~G-~~V~~lg~~~ 37 (119)
T cd02067 1 KVVIATVGGDGHDIGKNIVARALRDAG-FEVIDLGVDV 37 (119)
T ss_pred CEEEEeeCCchhhHHHHHHHHHHHHCC-CEEEECCCCC
Confidence 589999999999999999999999999 9998876543
No 160
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=75.56 E-value=20 Score=33.43 Aligned_cols=93 Identities=24% Similarity=0.280 Sum_probs=52.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHH
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTR 87 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (476)
|||+++. ++|. --.|+++|.++| |+|+..+.+. .....+... . +... ... .+
T Consensus 1 m~ILvlG--GT~e---gr~la~~L~~~g-~~v~~s~~t~-~~~~~~~~~----g-~~~v-~~g-----~l---------- 52 (256)
T TIGR00715 1 MTVLLMG--GTVD---SRAIAKGLIAQG-IEILVTVTTS-EGKHLYPIH----Q-ALTV-HTG-----AL---------- 52 (256)
T ss_pred CeEEEEe--chHH---HHHHHHHHHhCC-CeEEEEEccC-Ccccccccc----C-CceE-EEC-----CC----------
Confidence 4565553 3443 568999999999 9999887653 111111100 0 0111 010 01
Q ss_pred HHHHHHHhhcHHHHHHHHhcCCCCEEEEC--CCcc----hHHHHHHHcCCCeEEEe
Q 046326 88 LHAIVEESLSKSLKSVLTELCNPNALVID--LFCT----QAFEICSQLSIPTYSFV 137 (476)
Q Consensus 88 ~~~~~~~~~~~~l~~~l~~~~~pDlVI~D--~~~~----~~~~~A~~lgIP~v~~~ 137 (476)
... .+.+++++. ++|+||-- ++.. -+..+|+.+|||++-+-
T Consensus 53 -------~~~-~l~~~l~~~-~i~~VIDAtHPfA~~is~~a~~a~~~~~ipylR~e 99 (256)
T TIGR00715 53 -------DPQ-ELREFLKRH-SIDILVDATHPFAAQITTNATAVCKELGIPYVRFE 99 (256)
T ss_pred -------CHH-HHHHHHHhc-CCCEEEEcCCHHHHHHHHHHHHHHHHhCCcEEEEE
Confidence 112 566777777 99988832 2221 13448899999999864
No 161
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=74.33 E-value=63 Score=28.96 Aligned_cols=95 Identities=9% Similarity=0.118 Sum_probs=49.4
Q ss_pred HHhhccCCccceecccCchHHHH-----HHhcCCcEeec--cccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHH
Q 046326 355 VHILRHPSTGGFLSHCGWNSTLE-----SICHGVPMIAW--PLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIE 427 (476)
Q Consensus 355 ~~iL~~~~~~~~I~HgG~~s~~e-----al~~GvP~l~~--P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~ 427 (476)
...|....+ +|..-|...+.+ |-..|+|+-++ |-..| +..-..+ .+-++-+.+.. ++..-.-+..|+
T Consensus 64 ~~dl~~~~l--Vi~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~-f~~pa~~--~~g~l~iaisT-~G~sP~la~~lr 137 (205)
T TIGR01470 64 ADILEGAFL--VIAATDDEELNRRVAHAARARGVPVNVVDDPELCS-FIFPSIV--DRSPVVVAISS-GGAAPVLARLLR 137 (205)
T ss_pred HHHhCCcEE--EEECCCCHHHHHHHHHHHHHcCCEEEECCCcccCe-EEEeeEE--EcCCEEEEEEC-CCCCcHHHHHHH
Confidence 344666664 777777654433 34567887433 22222 3333334 34345555555 111223345677
Q ss_pred HHHHHHhcCChhHHHHHHHHHHHHHHHHH
Q 046326 428 RVVRLVMEGEEGKVMRRRVQELKESASRE 456 (476)
Q Consensus 428 ~ai~~~l~~~~~~~~~~~a~~l~~~~~~~ 456 (476)
+.|.+++.. +...+-+.+.++++.+++.
T Consensus 138 ~~ie~~l~~-~~~~~~~~~~~~R~~~k~~ 165 (205)
T TIGR01470 138 ERIETLLPP-SLGDLATLAATWRDAVKKR 165 (205)
T ss_pred HHHHHhcch-hHHHHHHHHHHHHHHHHhh
Confidence 777777753 2334556666666666544
No 162
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=74.16 E-value=26 Score=30.05 Aligned_cols=100 Identities=16% Similarity=0.291 Sum_probs=60.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCC---
Q 046326 6 LQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDM--- 82 (476)
Q Consensus 6 ~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 82 (476)
..|+|++.-.|+-|-..-.+.|+..|.++| +.|-=+.++. ++....+. |++.+++......-+...+.
T Consensus 4 ~~mki~ITG~PGvGKtTl~~ki~e~L~~~g-~kvgGf~t~E------VR~gGkR~--GF~Ivdl~tg~~~~la~~~~~~~ 74 (179)
T COG1618 4 MAMKIFITGRPGVGKTTLVLKIAEKLREKG-YKVGGFITPE------VREGGKRI--GFKIVDLATGEEGILARVGFSRP 74 (179)
T ss_pred cceEEEEeCCCCccHHHHHHHHHHHHHhcC-ceeeeEEeee------eecCCeEe--eeEEEEccCCceEEEEEcCCCCc
Confidence 368999999999999999999999999999 7776444432 33333333 78888877432211100010
Q ss_pred ---chHHHHHHHHHHhhcHHHHHHHHhcCCCCEEEECCC
Q 046326 83 ---PVVTRLHAIVEESLSKSLKSVLTELCNPNALVIDLF 118 (476)
Q Consensus 83 ---~~~~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~ 118 (476)
.+.-....+-....+ .++..++ ..|+||.|..
T Consensus 75 rvGkY~V~v~~le~i~~~-al~rA~~---~aDvIIIDEI 109 (179)
T COG1618 75 RVGKYGVNVEGLEEIAIP-ALRRALE---EADVIIIDEI 109 (179)
T ss_pred ccceEEeeHHHHHHHhHH-HHHHHhh---cCCEEEEecc
Confidence 111011122223444 5665555 5699999964
No 163
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=73.38 E-value=81 Score=29.55 Aligned_cols=38 Identities=11% Similarity=0.153 Sum_probs=33.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcC-CcEEEEEEccC
Q 046326 9 HVAVLPSPGLGHLIPLLEFAKRLVLNH-GVHVSFLVITT 46 (476)
Q Consensus 9 rIll~~~p~~GHi~P~l~La~~L~~rG-~h~V~~~~~~~ 46 (476)
||+++-....|++.=+..+.++|+++. +-+|++++.+.
T Consensus 1 kILii~~~~iGD~i~~~p~l~~Lk~~~P~~~I~~l~~~~ 39 (279)
T cd03789 1 RILVIRLSWIGDVVLATPLLRALKARYPDARITVLAPPW 39 (279)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHHCCCCEEEEEEChh
Confidence 589999999999999999999999975 36899998763
No 164
>COG2086 FixA Electron transfer flavoprotein, beta subunit [Energy production and conversion]
Probab=73.35 E-value=32 Score=32.10 Aligned_cols=104 Identities=19% Similarity=0.212 Sum_probs=60.0
Q ss_pred CccCHHHH----HHHHHHHHhcC-CcEEEEEEccCCcchhhhhhhhhcCCCCceEE-EcCCCCCCCCCCCCCchHHHHHH
Q 046326 17 GLGHLIPL----LEFAKRLVLNH-GVHVSFLVITTNEASAAKNNLLRSLPHGLDVV-DLPPVDVSAVTSDDMPVVTRLHA 90 (476)
Q Consensus 17 ~~GHi~P~----l~La~~L~~rG-~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 90 (476)
..--+||+ +..|-+|+++| +-+|++++..++......+..... |.+-. -+.+. .+ .+.+..
T Consensus 31 v~~~in~~D~~AvEeAlrLke~~~~~eV~vlt~Gp~~a~~~lr~aLAm---GaDraili~d~---~~--~~~d~~----- 97 (260)
T COG2086 31 VPLSINPFDLNAVEEALRLKEKGYGGEVTVLTMGPPQAEEALREALAM---GADRAILITDR---AF--AGADPL----- 97 (260)
T ss_pred CCcccChhhHHHHHHHHHhhccCCCceEEEEEecchhhHHHHHHHHhc---CCCeEEEEecc---cc--cCccHH-----
Confidence 33445554 56677788843 368999998876666555553322 22211 11110 01 111111
Q ss_pred HHHHhhcHHHHHHHHhcCCCCEEEE-----C-CCcchHHHHHHHcCCCeEEEec
Q 046326 91 IVEESLSKSLKSVLTELCNPNALVI-----D-LFCTQAFEICSQLSIPTYSFVT 138 (476)
Q Consensus 91 ~~~~~~~~~l~~~l~~~~~pDlVI~-----D-~~~~~~~~~A~~lgIP~v~~~~ 138 (476)
.... .+.+.+++. ++|+|++ | ....-+..+|+.||+|++.+..
T Consensus 98 ---~ta~-~Laa~~~~~-~~~LVl~G~qa~D~~t~qvg~~lAe~Lg~P~~t~v~ 146 (260)
T COG2086 98 ---ATAK-ALAAAVKKI-GPDLVLTGKQAIDGDTGQVGPLLAELLGWPQVTYVS 146 (260)
T ss_pred ---HHHH-HHHHHHHhc-CCCEEEEecccccCCccchHHHHHHHhCCceeeeEE
Confidence 1112 577778888 9999996 3 2233456799999999998654
No 165
>cd00550 ArsA_ATPase Oxyanion-translocating ATPase (ArsA). This ATPase is involved in transport of arsenite, antimonite or other oxyanions across biological membranes in all three kingdoms of life. ArsA contains a highly conserved AAA motif present in the AAA+ ATPase superfamily associated with a variety of cellular activities. To form a functional ATP-driven pump, ArsA interacts with the permease ArsB, which is a channel-forming integral membrane protein. One of the most interesting features of ArsA is the allosteric activation by its transport substrates. A divalent cation, typically Mg2+, is required for its enzymatic activity.
Probab=73.20 E-value=23 Score=33.02 Aligned_cols=37 Identities=16% Similarity=0.108 Sum_probs=31.2
Q ss_pred EEEEEc-CCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 9 HVAVLP-SPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 9 rIll~~-~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
||++++ -|+.|...-..++|..++++| ++|.++..+.
T Consensus 1 ~~~~~~gkgG~GKtt~a~~la~~~a~~g-~~vLlvd~D~ 38 (254)
T cd00550 1 RYIFFGGKGGVGKTTISAATAVRLAEQG-KKVLLVSTDP 38 (254)
T ss_pred CEEEEECCCCchHHHHHHHHHHHHHHCC-CCceEEeCCC
Confidence 344444 589999999999999999999 9999998775
No 166
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=72.71 E-value=53 Score=31.21 Aligned_cols=40 Identities=15% Similarity=0.218 Sum_probs=35.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 6 LQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 6 ~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
...+|.|.-.|+-|--.=.=.|+++|.++| |+|.++..++
T Consensus 50 ~a~viGITG~PGaGKSTli~~L~~~l~~~G-~rVaVlAVDP 89 (323)
T COG1703 50 NAHVIGITGVPGAGKSTLIEALGRELRERG-HRVAVLAVDP 89 (323)
T ss_pred CCcEEEecCCCCCchHHHHHHHHHHHHHCC-cEEEEEEECC
Confidence 456788999999999999999999999999 9999988664
No 167
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=71.21 E-value=90 Score=29.15 Aligned_cols=81 Identities=19% Similarity=0.300 Sum_probs=52.2
Q ss_pred CCeEeccccch---HHhhccCCccceecc---cCch-HHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccC
Q 046326 344 AGMVVPSWAPQ---VHILRHPSTGGFLSH---CGWN-STLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEP 416 (476)
Q Consensus 344 ~~~~~~~~~pq---~~iL~~~~~~~~I~H---gG~~-s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~ 416 (476)
.++...+++++ ..++..+++ ++.- .|.| ++.||+++|+|+|.... ......+ ...+.|. +..
T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~----~~~~e~~--~~~~~g~-~~~-- 325 (381)
T COG0438 257 DNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASDV----GGIPEVV--EDGETGL-LVP-- 325 (381)
T ss_pred CcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECCC----CChHHHh--cCCCceE-ecC--
Confidence 56777888882 346666765 5554 3554 36999999999977644 2222333 3332466 333
Q ss_pred CCCCcCHHHHHHHHHHHhcCCh
Q 046326 417 GKKVIGREEIERVVRLVMEGEE 438 (476)
Q Consensus 417 ~~~~~~~~~l~~ai~~~l~~~~ 438 (476)
..+.+++.+++..++++.+
T Consensus 326 ---~~~~~~~~~~i~~~~~~~~ 344 (381)
T COG0438 326 ---PGDVEELADALEQLLEDPE 344 (381)
T ss_pred ---CCCHHHHHHHHHHHhcCHH
Confidence 1268999999999998764
No 168
>TIGR00708 cobA cob(I)alamin adenosyltransferase. Alternate name: corrinoid adenosyltransferase.
Probab=69.33 E-value=77 Score=27.58 Aligned_cols=103 Identities=12% Similarity=0.119 Sum_probs=59.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCc-chhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchH
Q 046326 7 QPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNE-ASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVV 85 (476)
Q Consensus 7 ~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (476)
+.-|.+++..+.|-..-.+.+|-+...+| +.|.++-.-... ..... ...+.+ ++.+........-. . .+..
T Consensus 5 ~Gli~v~~g~GkGKtt~a~g~a~ra~~~g-~~v~ivQFlKg~~~~GE~-~~l~~~--~~~~~~~g~g~~~~--~--~~~~ 76 (173)
T TIGR00708 5 RGIIIVHTGNGKGKTTAAFGMALRALGHG-KKVGVIQFIKGAWPNGER-AAFEPH--GVEFQVMGTGFTWE--T--QNRE 76 (173)
T ss_pred ccEEEEECCCCCChHHHHHHHHHHHHHCC-CeEEEEEEecCCcccChH-HHHHhc--CcEEEECCCCCeec--C--CCcH
Confidence 45688888899999999999999999999 999766432211 11001 111222 67777776421111 1 1111
Q ss_pred HHHHHHHHHhhcHHHHHHHHhcCCCCEEEECCCcc
Q 046326 86 TRLHAIVEESLSKSLKSVLTELCNPNALVIDLFCT 120 (476)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~ 120 (476)
. -......... ..++.+.+- ++|+||.|....
T Consensus 77 ~-~~~~~~~~~~-~a~~~l~~~-~~DlvVLDEi~~ 108 (173)
T TIGR00708 77 A-DTAIAKAAWQ-HAKEMLADP-ELDLVLLDELTY 108 (173)
T ss_pred H-HHHHHHHHHH-HHHHHHhcC-CCCEEEehhhHH
Confidence 1 1122333333 455555554 999999998643
No 169
>PRK02910 light-independent protochlorophyllide reductase subunit B; Provisional
Probab=68.79 E-value=40 Score=35.16 Aligned_cols=35 Identities=14% Similarity=0.220 Sum_probs=28.7
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEe
Q 046326 99 SLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFV 137 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~ 137 (476)
.+.+.+++. +||+||.+. ....+|+++|||++.++
T Consensus 353 el~~~i~~~-~PdliiG~~---~er~~a~~lgiP~~~i~ 387 (519)
T PRK02910 353 EVEDAIAEA-APELVLGTQ---MERHSAKRLGIPCAVIS 387 (519)
T ss_pred HHHHHHHhc-CCCEEEEcc---hHHHHHHHcCCCEEEec
Confidence 577778888 999999875 45668999999998765
No 170
>PRK05973 replicative DNA helicase; Provisional
Probab=68.23 E-value=54 Score=30.19 Aligned_cols=110 Identities=15% Similarity=0.135 Sum_probs=63.4
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHH
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLH 89 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (476)
+++..-|+.|-..=.+.++...+++| +.|.|++.+.. ...+......+ ++.+..+.... .. ...+....
T Consensus 67 ~LIaG~PG~GKT~lalqfa~~~a~~G-e~vlyfSlEes--~~~i~~R~~s~--g~d~~~~~~~~--~~-d~~d~~~~--- 135 (237)
T PRK05973 67 VLLGARPGHGKTLLGLELAVEAMKSG-RTGVFFTLEYT--EQDVRDRLRAL--GADRAQFADLF--EF-DTSDAICA--- 135 (237)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHhcC-CeEEEEEEeCC--HHHHHHHHHHc--CCChHHhccce--Ee-ecCCCCCH---
Confidence 56667789999999999999998898 99999998852 22233332222 33222111000 00 00000000
Q ss_pred HHHHHhhcHHHHHHHHhcCCCCEEEECCCcch---------------HHHHHHHcCCCeEEEec
Q 046326 90 AIVEESLSKSLKSVLTELCNPNALVIDLFCTQ---------------AFEICSQLSIPTYSFVT 138 (476)
Q Consensus 90 ~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~---------------~~~~A~~lgIP~v~~~~ 138 (476)
.. .++.+.++. ++++||.|+.... -..+|+.+|||++.++-
T Consensus 136 ------~~-ii~~l~~~~-~~~lVVIDsLq~l~~~~~~~el~~~~~~Lk~~Ak~~gitvIl~sQ 191 (237)
T PRK05973 136 ------DY-IIARLASAP-RGTLVVIDYLQLLDQRREKPDLSVQVRALKSFARERGLIIVFISQ 191 (237)
T ss_pred ------HH-HHHHHHHhh-CCCEEEEEcHHHHhhcccchhHHHHHHHHHHHHHhCCCeEEEEec
Confidence 01 234444455 8899999875532 11267889999998765
No 171
>PF02702 KdpD: Osmosensitive K+ channel His kinase sensor domain; InterPro: IPR003852 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Signal transducing histidine kinases are the key elements in two-component signal transduction systems, which control complex processes such as the initiation of development in microorganisms [, ]. Examples of histidine kinases are EnvZ, which plays a central role in osmoregulation [], and CheA, which plays a central role in the chemotaxis system []. Histidine kinases usually have an N-terminal ligand-binding domain and a C-terminal kinase domain, but other domains may also be present. The kinase domain is responsible for the autophosphorylation of the histidine with ATP, the phosphotransfer from the kinase to an aspartate of the response regulator, and (with bifunctional enzymes) the phosphotransfer from aspartyl phosphate back to ADP or to water []. The kinase core has a unique fold, distinct from that of the Ser/Thr/Tyr kinase superfamily. HKs can be roughly divided into two classes: orthodox and hybrid kinases [, ]. Most orthodox HKs, typified by the Escherichia coli EnvZ protein, function as periplasmic membrane receptors and have a signal peptide and transmembrane segment(s) that separate the protein into a periplasmic N-terminal sensing domain and a highly conserved cytoplasmic C-terminal kinase core. Members of this family, however, have an integral membrane sensor domain. Not all orthodox kinases are membrane bound, e.g., the nitrogen regulatory kinase NtrB (GlnL) is a soluble cytoplasmic HK []. Hybrid kinases contain multiple phosphodonor and phosphoacceptor sites and use multi-step phospho-relay schemes instead of promoting a single phosphoryl transfer. In addition to the sensor domain and kinase core, they contain a CheY-like receiver domain and a His-containing phosphotransfer (HPt) domain. This entry represents the N-terminal domain found in KdpD sensor kinase proteins, which regulate the kdpFABC operon responsible for potassium transport []. The N-terminal domain forms part of the cytoplasmic region of the protein, which may be the sensor domain responsible for sensing turgor pressure [].; GO: 0000155 two-component sensor activity, 0004673 protein histidine kinase activity, 0000160 two-component signal transduction system (phosphorelay), 0016020 membrane; PDB: 2R8R_B.
Probab=67.95 E-value=23 Score=31.54 Aligned_cols=40 Identities=25% Similarity=0.291 Sum_probs=31.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 6 LQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 6 ~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
-+++|.+=..|+-|-.+-||.=|++|+++| .+|.+-..++
T Consensus 4 GrLkIflG~apGVGKTy~ML~ea~~l~~~G-~DVViG~vet 43 (211)
T PF02702_consen 4 GRLKIFLGAAPGVGKTYAMLQEAHRLKEQG-VDVVIGYVET 43 (211)
T ss_dssp --EEEEEESSTTSSHHHHHHHHHHHHHHTT---EEEEE---
T ss_pred ccEEEEEecCCCCCHHHHHHHHHHHHHHCC-CCEEEEEecC
Confidence 367899999999999999999999999999 8888877765
No 172
>cd01974 Nitrogenase_MoFe_beta Nitrogenase_MoFe_beta: Nitrogenase MoFe protein, beta subunit. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Molybdenum (Mo-) nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. This group contains the beta subunit of the MoFe protein. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=67.46 E-value=62 Score=32.88 Aligned_cols=36 Identities=22% Similarity=0.240 Sum_probs=28.6
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEec
Q 046326 99 SLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFVT 138 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~ 138 (476)
.+.+.+++. +||++|.... ...+|+++|||++.+..
T Consensus 368 e~~~~i~~~-~pDliiG~s~---~~~~a~~~gip~v~~~~ 403 (435)
T cd01974 368 HLRSLLFTE-PVDLLIGNTY---GKYIARDTDIPLVRFGF 403 (435)
T ss_pred HHHHHHhhc-CCCEEEECcc---HHHHHHHhCCCEEEeeC
Confidence 567777777 9999999763 56789999999986543
No 173
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=67.40 E-value=18 Score=33.54 Aligned_cols=21 Identities=14% Similarity=0.097 Sum_probs=16.7
Q ss_pred HHHHHHHHHhcCCcEEEEEEccC
Q 046326 24 LLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 24 ~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
+.+|+++|++ + |+|+++.|..
T Consensus 16 i~aL~~~l~~-~-~~V~VvAP~~ 36 (253)
T PRK13935 16 IIILAEYLSE-K-HEVFVVAPDK 36 (253)
T ss_pred HHHHHHHHHh-C-CcEEEEccCC
Confidence 6678888864 6 8999998875
No 174
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=67.23 E-value=11 Score=30.51 Aligned_cols=38 Identities=8% Similarity=-0.092 Sum_probs=25.9
Q ss_pred CEEEEEcCCCcc---CHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 8 PHVAVLPSPGLG---HLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 8 ~rIll~~~p~~G---Hi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
|||+|+--|-.+ .-.-.++|+.+..+|| |+|.++.+..
T Consensus 1 Mki~fvmDpi~~i~~~kDTT~alm~eAq~RG-hev~~~~~~d 41 (119)
T PF02951_consen 1 MKIAFVMDPIESIKPYKDTTFALMLEAQRRG-HEVFYYEPGD 41 (119)
T ss_dssp -EEEEEES-GGG--TTT-HHHHHHHHHHHTT--EEEEE-GGG
T ss_pred CeEEEEeCCHHHCCCCCChHHHHHHHHHHCC-CEEEEEEcCc
Confidence 567777776554 3346789999999999 9999998764
No 175
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=66.92 E-value=24 Score=36.94 Aligned_cols=80 Identities=11% Similarity=0.053 Sum_probs=47.6
Q ss_pred chHHhhccCCccceec---ccCc-hHHHHHHhcCCcEeeccccc-hhhhhhhhhcceee-eeEEeccccC-CCCCcCHHH
Q 046326 353 PQVHILRHPSTGGFLS---HCGW-NSTLESICHGVPMIAWPLYA-EQRMNAAMLTAEET-GVAVKPETEP-GKKVIGREE 425 (476)
Q Consensus 353 pq~~iL~~~~~~~~I~---HgG~-~s~~eal~~GvP~l~~P~~~-DQ~~na~~~~~~~~-G~G~~l~~~~-~~~~~~~~~ 425 (476)
+...++.-+++ ||. +=|+ -+..||+++|+|+|.....+ ..... ..+ ..- ..|+.+..+. .+-.-+.++
T Consensus 467 ~y~E~~~g~dl--~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~-E~v--~~~~~~gi~V~~r~~~~~~e~v~~ 541 (590)
T cd03793 467 DYEEFVRGCHL--GVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME-EHI--EDPESYGIYIVDRRFKSPDESVQQ 541 (590)
T ss_pred chHHHhhhceE--EEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH-HHh--ccCCCceEEEecCCccchHHHHHH
Confidence 35566777786 444 3454 48999999999999987632 22222 112 111 2465555311 111235678
Q ss_pred HHHHHHHHhcCC
Q 046326 426 IERVVRLVMEGE 437 (476)
Q Consensus 426 l~~ai~~~l~~~ 437 (476)
|++++.++++.+
T Consensus 542 La~~m~~~~~~~ 553 (590)
T cd03793 542 LTQYMYEFCQLS 553 (590)
T ss_pred HHHHHHHHhCCc
Confidence 889998888544
No 176
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=66.88 E-value=54 Score=26.01 Aligned_cols=84 Identities=15% Similarity=0.184 Sum_probs=51.2
Q ss_pred CHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHHHHHHHhhcHH
Q 046326 20 HLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLHAIVEESLSKS 99 (476)
Q Consensus 20 Hi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (476)
+=.=++.+|+.|.+.| +++. +|..+ .+.+... |+.+..+... +++ ..+ .
T Consensus 10 ~K~~~~~~a~~l~~~G-~~i~-AT~gT-------a~~L~~~--Gi~~~~v~~~------~~~-------------g~~-~ 58 (112)
T cd00532 10 VKAMLVDLAPKLSSDG-FPLF-ATGGT-------SRVLADA--GIPVRAVSKR------HED-------------GEP-T 58 (112)
T ss_pred cHHHHHHHHHHHHHCC-CEEE-ECcHH-------HHHHHHc--CCceEEEEec------CCC-------------CCc-H
Confidence 3455789999999999 7773 44332 2222222 7776666421 111 224 6
Q ss_pred HHHHHHh-cCCCCEEEE--CCCc-------chH-HHHHHHcCCCeEE
Q 046326 100 LKSVLTE-LCNPNALVI--DLFC-------TQA-FEICSQLSIPTYS 135 (476)
Q Consensus 100 l~~~l~~-~~~pDlVI~--D~~~-------~~~-~~~A~~lgIP~v~ 135 (476)
+.+++++ - ++|+||. +... ... ..+|-..+||+++
T Consensus 59 i~~~i~~~g-~idlVIn~~~~~~~~~~~~dg~~iRR~A~~~~Ip~~T 104 (112)
T cd00532 59 VDAAIAEKG-KFDVVINLRDPRRDRCTDEDGTALLRLARLYKIPVTT 104 (112)
T ss_pred HHHHHhCCC-CEEEEEEcCCCCcccccCCChHHHHHHHHHcCCCEEE
Confidence 7777777 7 9999996 3221 112 3378899999886
No 177
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=66.79 E-value=38 Score=31.20 Aligned_cols=107 Identities=16% Similarity=0.162 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHHHHHHHhhcHHH
Q 046326 21 LIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLHAIVEESLSKSL 100 (476)
Q Consensus 21 i~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 100 (476)
++|..++.++|++.|-.+|.+++|-.+.-...+.++.+.. |+++..+..-... .+.++.. .... .+
T Consensus 105 tt~~~A~~~AL~alg~~RIalvTPY~~~v~~~~~~~l~~~--G~eV~~~~~~~~~----~~~~ia~-------i~p~-~i 170 (239)
T TIGR02990 105 VTPSSAAVDGLAALGVRRISLLTPYTPETSRPMAQYFAVR--GFEIVNFTCLGLT----DDREMAR-------ISPD-CI 170 (239)
T ss_pred eCHHHHHHHHHHHcCCCEEEEECCCcHHHHHHHHHHHHhC--CcEEeeeeccCCC----CCceeee-------cCHH-HH
Confidence 4688889999998885678888776533344455555554 7887776421111 1111110 1111 44
Q ss_pred HHHHHhc-C-CCCEEEECCCcchHHH----HHHHcCCCeEEEecccH
Q 046326 101 KSVLTEL-C-NPNALVIDLFCTQAFE----ICSQLSIPTYSFVTTSV 141 (476)
Q Consensus 101 ~~~l~~~-~-~pDlVI~D~~~~~~~~----~A~~lgIP~v~~~~~~~ 141 (476)
.+++++. . ++|.|+.--....... +=+.+|+|++.......
T Consensus 171 ~~~~~~~~~~~aDAifisCTnLrt~~vi~~lE~~lGkPVlsSNqat~ 217 (239)
T TIGR02990 171 VEAALAAFDPDADALFLSCTALRAATCAQRIEQAIGKPVVTSNQATA 217 (239)
T ss_pred HHHHHHhcCCCCCEEEEeCCCchhHHHHHHHHHHHCCCEEEHHHHHH
Confidence 4444443 2 8899886543443333 44668999987554443
No 178
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=65.15 E-value=1.2e+02 Score=29.53 Aligned_cols=108 Identities=11% Similarity=0.047 Sum_probs=63.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcC-CcEEEEEEccCCcchhhhhhhhhcCCCCce-EEEcCCCCCCCCCCCCCc
Q 046326 6 LQPHVAVLPSPGLGHLIPLLEFAKRLVLNH-GVHVSFLVITTNEASAAKNNLLRSLPHGLD-VVDLPPVDVSAVTSDDMP 83 (476)
Q Consensus 6 ~~~rIll~~~p~~GHi~P~l~La~~L~~rG-~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 83 (476)
..+||+++-....||+.=...+.+.|+++- +.+|++++.+. + ....+..| .++ ++.++.. .. .
T Consensus 4 ~~~~ILii~~~~iGD~vl~~P~l~~Lk~~~P~a~I~~l~~~~--~----~~l~~~~P-~id~vi~~~~~---~~-----~ 68 (352)
T PRK10422 4 PFRRILIIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQD--T----IPILSENP-EINALYGIKNK---KA-----G 68 (352)
T ss_pred CCceEEEEEecccCceeeHHHHHHHHHHHCCCCeEEEEeccC--h----HHHhccCC-CceEEEEeccc---cc-----c
Confidence 467899999999999999999999999984 38999998663 2 23333444 443 3333211 00 0
Q ss_pred hHHHHHHHHHHhhcHHHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEE
Q 046326 84 VVTRLHAIVEESLSKSLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYS 135 (476)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~ 135 (476)
....+.. .. .+...+++. ++|++|.-........++...|.|..+
T Consensus 69 ~~~~~~~-----~~-~l~~~lr~~-~yD~vidl~~~~~s~ll~~l~~a~~ri 113 (352)
T PRK10422 69 ASEKIKN-----FF-SLIKVLRAN-KYDLIVNLTDQWMVALLVRLLNARVKI 113 (352)
T ss_pred HHHHHHH-----HH-HHHHHHhhC-CCCEEEEcccchHHHHHHHHhCCCeEE
Confidence 1100111 11 233334444 999999543233334466666777654
No 179
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=65.01 E-value=1.3e+02 Score=28.80 Aligned_cols=38 Identities=13% Similarity=0.260 Sum_probs=33.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcC-CcEEEEEEcc
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNH-GVHVSFLVIT 45 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG-~h~V~~~~~~ 45 (476)
|||+++-....||+.=...+.+.|+++- +.+|++++..
T Consensus 1 m~ILii~~~~iGD~v~~~p~~~~lk~~~P~a~I~~l~~~ 39 (322)
T PRK10964 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIQFDWVVEE 39 (322)
T ss_pred CeEEEEeccchHHHHhHHHHHHHHHHhCCCCEEEEEECH
Confidence 5899999999999999999999999972 3899999865
No 180
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=64.86 E-value=12 Score=30.72 Aligned_cols=37 Identities=8% Similarity=0.079 Sum_probs=30.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
+||++...|+.+=+. ...+.++|+++| |+|.++..+.
T Consensus 1 k~i~l~vtGs~~~~~-~~~~l~~L~~~g-~~v~vv~S~~ 37 (129)
T PF02441_consen 1 KRILLGVTGSIAAYK-APDLLRRLKRAG-WEVRVVLSPS 37 (129)
T ss_dssp -EEEEEE-SSGGGGG-HHHHHHHHHTTT-SEEEEEESHH
T ss_pred CEEEEEEECHHHHHH-HHHHHHHHhhCC-CEEEEEECCc
Confidence 588888888877777 999999999999 9999998763
No 181
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=63.78 E-value=21 Score=33.11 Aligned_cols=39 Identities=31% Similarity=0.516 Sum_probs=28.8
Q ss_pred HHHHHHHhcCCCCEEE--ECCCcc----hHHHHHHHcCCCeEEEec
Q 046326 99 SLKSVLTELCNPNALV--IDLFCT----QAFEICSQLSIPTYSFVT 138 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI--~D~~~~----~~~~~A~~lgIP~v~~~~ 138 (476)
.+.+++++. ++|+|| +++|.. -+..+|+.+|||++-+--
T Consensus 57 ~l~~~l~~~-~i~~vIDATHPfA~~is~na~~a~~~~~ipylR~eR 101 (249)
T PF02571_consen 57 GLAEFLREN-GIDAVIDATHPFAAEISQNAIEACRELGIPYLRFER 101 (249)
T ss_pred HHHHHHHhC-CCcEEEECCCchHHHHHHHHHHHHhhcCcceEEEEc
Confidence 678888887 999999 454433 234489999999998654
No 182
>cd01981 Pchlide_reductase_B Pchlide_reductase_B: B protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=63.55 E-value=54 Score=33.20 Aligned_cols=36 Identities=14% Similarity=0.218 Sum_probs=29.5
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEec
Q 046326 99 SLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFVT 138 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~ 138 (476)
.+.+++++. +||++|.+. ....+|+++|+|++.++.
T Consensus 361 e~~~~i~~~-~pdliig~~---~~~~~a~~~gip~~~~~~ 396 (430)
T cd01981 361 EVGDMIART-EPELIFGTQ---MERHIGKRLDIPCAVISA 396 (430)
T ss_pred HHHHHHHhh-CCCEEEecc---hhhHHHHHcCCCEEEEeC
Confidence 677888888 999999986 355578999999987654
No 183
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=63.50 E-value=88 Score=27.07 Aligned_cols=97 Identities=15% Similarity=0.134 Sum_probs=58.3
Q ss_pred HHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHHHHHHHhhcHHHHHH
Q 046326 24 LLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLHAIVEESLSKSLKSV 103 (476)
Q Consensus 24 ~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 103 (476)
+..|.+...++| ..|.++...............+.+| ++.++....+..+ ....+ .+.+.
T Consensus 37 ~~~l~~~~~~~~-~~ifllG~~~~~~~~~~~~l~~~yP-~l~ivg~~~g~f~-----------------~~~~~-~i~~~ 96 (172)
T PF03808_consen 37 FPDLLRRAEQRG-KRIFLLGGSEEVLEKAAANLRRRYP-GLRIVGYHHGYFD-----------------EEEEE-AIINR 96 (172)
T ss_pred HHHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHHHHCC-CeEEEEecCCCCC-----------------hhhHH-HHHHH
Confidence 345566666677 8898888775333344445555667 8888876532110 01122 45555
Q ss_pred HHhcCCCCEEEECCCcc----hHHHHHHHcCCCeEEEecccHH
Q 046326 104 LTELCNPNALVIDLFCT----QAFEICSQLSIPTYSFVTTSVH 142 (476)
Q Consensus 104 l~~~~~pDlVI~D~~~~----~~~~~A~~lgIP~v~~~~~~~~ 142 (476)
|.+. +||+|++..-++ |.....+.++.+ +.++...++
T Consensus 97 I~~~-~pdiv~vglG~PkQE~~~~~~~~~l~~~-v~i~vG~~~ 137 (172)
T PF03808_consen 97 INAS-GPDIVFVGLGAPKQERWIARHRQRLPAG-VIIGVGGAF 137 (172)
T ss_pred HHHc-CCCEEEEECCCCHHHHHHHHHHHHCCCC-EEEEECchh
Confidence 6666 999999876554 555566777777 554544443
No 184
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=63.43 E-value=8.7 Score=37.95 Aligned_cols=115 Identities=14% Similarity=0.227 Sum_probs=65.0
Q ss_pred CCeEec-cccchHHhhccCCccceecccCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccc-cCCCCCc
Q 046326 344 AGMVVP-SWAPQVHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPET-EPGKKVI 421 (476)
Q Consensus 344 ~~~~~~-~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~-~~~~~~~ 421 (476)
.++... +..+-..+|..+++ +||-- .+.+.|.+..++|+|....-.|.+... .|.-..... ..+..--
T Consensus 252 ~~i~~~~~~~~~~~ll~~aDi--LITDy-SSi~fD~~~l~KPiify~~D~~~Y~~~-------rg~~~~~~~~~pg~~~~ 321 (369)
T PF04464_consen 252 SNIIFVSDNEDIYDLLAAADI--LITDY-SSIIFDFLLLNKPIIFYQPDLEEYEKE-------RGFYFDYEEDLPGPIVY 321 (369)
T ss_dssp TTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EEEE-TTTTTTTTT-------SSBSS-TTTSSSS-EES
T ss_pred CcEEECCCCCCHHHHHHhcCE--EEEec-hhHHHHHHHhCCCEEEEeccHHHHhhc-------cCCCCchHhhCCCceeC
Confidence 456543 34456789999996 99987 457899999999999887666665332 232222211 0111234
Q ss_pred CHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCCChHHHHHHHH
Q 046326 422 GREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGGSSSDSLASFI 471 (476)
Q Consensus 422 ~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 471 (476)
+.++|.++|.+++.++. .++++.+++.+++-. ..+|.++.+.++.++
T Consensus 322 ~~~eL~~~i~~~~~~~~--~~~~~~~~~~~~~~~-~~Dg~s~eri~~~I~ 368 (369)
T PF04464_consen 322 NFEELIEAIENIIENPD--EYKEKREKFRDKFFK-YNDGNSSERIVNYIF 368 (369)
T ss_dssp SHHHHHHHHTTHHHHHH--HTHHHHHHHHHHHST-T--S-HHHHHHHHHH
T ss_pred CHHHHHHHHHhhhhCCH--HHHHHHHHHHHHhCC-CCCchHHHHHHHHHh
Confidence 78999999999887554 255556666666654 345666555555543
No 185
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=63.41 E-value=54 Score=27.99 Aligned_cols=98 Identities=23% Similarity=0.272 Sum_probs=54.5
Q ss_pred HHHHHHHHHhcCCcEEEEEEccC-CcchhhhhhhhhcCCCCc-eEEEcCCCCCCCCCCCCCchHHHHHHHHHHhhcHHHH
Q 046326 24 LLEFAKRLVLNHGVHVSFLVITT-NEASAAKNNLLRSLPHGL-DVVDLPPVDVSAVTSDDMPVVTRLHAIVEESLSKSLK 101 (476)
Q Consensus 24 ~l~La~~L~~rG~h~V~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 101 (476)
++..|++|++..+.+|+.++..+ +.....+++..... |. +.+.+..+..... + ...... .+.
T Consensus 20 ~l~~A~~La~~~g~~v~av~~G~~~~~~~~l~~~l~~~--G~d~v~~~~~~~~~~~-----~--------~~~~a~-~l~ 83 (164)
T PF01012_consen 20 ALEAARRLAEALGGEVTAVVLGPAEEAAEALRKALAKY--GADKVYHIDDPALAEY-----D--------PEAYAD-ALA 83 (164)
T ss_dssp HHHHHHHHHHCTTSEEEEEEEETCCCHHHHHHHHHHST--TESEEEEEE-GGGTTC--------------HHHHHH-HHH
T ss_pred HHHHHHHHHhhcCCeEEEEEEecchhhHHHHhhhhhhc--CCcEEEEecCcccccc-----C--------HHHHHH-HHH
Confidence 67889999875337888887663 22333333333323 43 3444443211111 0 111222 577
Q ss_pred HHHHhcCCCCEEEECCCcch---HHHHHHHcCCCeEEEec
Q 046326 102 SVLTELCNPNALVIDLFCTQ---AFEICSQLSIPTYSFVT 138 (476)
Q Consensus 102 ~~l~~~~~pDlVI~D~~~~~---~~~~A~~lgIP~v~~~~ 138 (476)
+++++. +||+|+....... +..+|.++|.|++.-..
T Consensus 84 ~~~~~~-~~~lVl~~~t~~g~~la~~lA~~L~~~~v~~v~ 122 (164)
T PF01012_consen 84 ELIKEE-GPDLVLFGSTSFGRDLAPRLAARLGAPLVTDVT 122 (164)
T ss_dssp HHHHHH-T-SEEEEESSHHHHHHHHHHHHHHT-EEEEEEE
T ss_pred HHHHhc-CCCEEEEcCcCCCCcHHHHHHHHhCCCccceEE
Confidence 777777 9999997654432 34489999999987554
No 186
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=63.32 E-value=1.9e+02 Score=29.90 Aligned_cols=108 Identities=10% Similarity=0.088 Sum_probs=68.0
Q ss_pred eEeccccchHH---hhccCCccceecc--cCchHH-HHHHhcCC----cEeeccccchhhhhhhhhcceeeeeEEecccc
Q 046326 346 MVVPSWAPQVH---ILRHPSTGGFLSH--CGWNST-LESICHGV----PMIAWPLYAEQRMNAAMLTAEETGVAVKPETE 415 (476)
Q Consensus 346 ~~~~~~~pq~~---iL~~~~~~~~I~H--gG~~s~-~eal~~Gv----P~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~ 415 (476)
+.+.+.+|+.. ++.-+++ ++||- -|+|-+ .|.++++. |+|+--+ .-|. +.+.-++.++.
T Consensus 364 ~~~~~~v~~~el~alYr~ADV-~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSef-----aGaa----~~l~~AllVNP- 432 (487)
T TIGR02398 364 QFFTRSLPYEEVSAWFAMADV-MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEF-----AGAA----VELKGALLTNP- 432 (487)
T ss_pred EEEcCCCCHHHHHHHHHhCCE-EEECccccccCcchhhHHhhhcCCCCCEEEecc-----ccch----hhcCCCEEECC-
Confidence 45567777664 5566776 66664 688855 49999877 5444422 2221 22333566665
Q ss_pred CCCCCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHhh
Q 046326 416 PGKKVIGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGGSSSDSLASFIKKCK 475 (476)
Q Consensus 416 ~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 475 (476)
.+.++++++|.+.|+.+..+ -++|.+++.+.++ .-....=.+.|++.|.
T Consensus 433 -----~d~~~~A~ai~~AL~m~~~E-r~~R~~~l~~~v~-----~~d~~~W~~~fl~~l~ 481 (487)
T TIGR02398 433 -----YDPVRMDETIYVALAMPKAE-QQARMREMFDAVN-----YYDVQRWADEFLAAVS 481 (487)
T ss_pred -----CCHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHh-----hCCHHHHHHHHHHHhh
Confidence 68999999999999876422 4555555555544 3455556777777764
No 187
>smart00851 MGS MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357.
Probab=63.31 E-value=61 Score=24.44 Aligned_cols=79 Identities=22% Similarity=0.274 Sum_probs=43.6
Q ss_pred HHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHHHHHHHhhcHHHHHH
Q 046326 24 LLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLHAIVEESLSKSLKSV 103 (476)
Q Consensus 24 ~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 103 (476)
++.+++.|.+.| +++. +|..+ .+.+... |+.+..+-... .+ + .+ .+.++
T Consensus 2 ~~~~~~~l~~lG-~~i~-AT~gT-------a~~L~~~--Gi~~~~~~~ki-~~----~--------------~~-~i~~~ 50 (90)
T smart00851 2 LVELAKRLAELG-FELV-ATGGT-------AKFLREA--GLPVKTLHPKV-HG----G--------------IL-AILDL 50 (90)
T ss_pred HHHHHHHHHHCC-CEEE-EccHH-------HHHHHHC--CCcceeccCCC-CC----C--------------CH-HHHHH
Confidence 568999999999 8773 44332 1222222 66553221100 00 0 02 35555
Q ss_pred HHhcCCCCEEEECCC---------cchHHHHHHHcCCCeE
Q 046326 104 LTELCNPNALVIDLF---------CTQAFEICSQLSIPTY 134 (476)
Q Consensus 104 l~~~~~pDlVI~D~~---------~~~~~~~A~~lgIP~v 134 (476)
++.- ++|+||.-.. ...-..+|...+||++
T Consensus 51 i~~g-~id~VIn~~~~~~~~~~~d~~~iRr~A~~~~Ip~~ 89 (90)
T smart00851 51 IKNG-EIDLVINTLYPLGAQPHEDGKALRRAAENIDIPGA 89 (90)
T ss_pred hcCC-CeEEEEECCCcCcceeccCcHHHHHHHHHcCCCee
Confidence 6665 9999997432 1122347888999976
No 188
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=62.59 E-value=15 Score=29.47 Aligned_cols=37 Identities=27% Similarity=0.189 Sum_probs=33.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEcc
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVIT 45 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~ 45 (476)
.|+++.+.+..-|-.-+..|+..|+++| |+|.++-..
T Consensus 1 ~~v~~~~~~~~~~~lGl~~la~~l~~~G-~~v~~~d~~ 37 (121)
T PF02310_consen 1 IRVVLACVPGEVHPLGLLYLAAYLRKAG-HEVDILDAN 37 (121)
T ss_dssp -EEEEEEBTTSSTSHHHHHHHHHHHHTT-BEEEEEESS
T ss_pred CEEEEEeeCCcchhHHHHHHHHHHHHCC-CeEEEECCC
Confidence 4789999999999999999999999999 999988544
No 189
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=61.98 E-value=69 Score=29.79 Aligned_cols=21 Identities=14% Similarity=0.042 Sum_probs=17.3
Q ss_pred HHHHHHHHHhcCCcEEEEEEccC
Q 046326 24 LLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 24 ~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
+.+|+++|++ + |+|+++.|..
T Consensus 16 l~aL~~~l~~-~-~~V~VvAP~~ 36 (253)
T PRK13933 16 INTLAELLSK-Y-HEVIIVAPEN 36 (253)
T ss_pred HHHHHHHHHh-C-CcEEEEccCC
Confidence 6788888865 6 8999998875
No 190
>CHL00076 chlB photochlorophyllide reductase subunit B
Probab=61.90 E-value=67 Score=33.41 Aligned_cols=36 Identities=17% Similarity=0.263 Sum_probs=29.4
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEec
Q 046326 99 SLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFVT 138 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~ 138 (476)
.+++.+++. +||+||.+. +...+|+++|||++.++.
T Consensus 365 ei~~~I~~~-~pdliiGs~---~er~ia~~lgiP~~~is~ 400 (513)
T CHL00076 365 EVGDMIARV-EPSAIFGTQ---MERHIGKRLDIPCGVISA 400 (513)
T ss_pred HHHHHHHhc-CCCEEEECc---hhhHHHHHhCCCEEEeec
Confidence 677888888 999999986 455679999999987653
No 191
>cd01977 Nitrogenase_VFe_alpha Nitrogenase_VFe_alpha -like: Nitrogenase VFe protein, alpha subunit like. This group contains proteins similar to the alpha subunits of, the VFe protein of the vanadium-dependent (V-) nitrogenase and the FeFe protein of the iron only (Fe-) nitrogenase Nitrogenase catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. In addition to V- and Fe- nitrogenases there is a molybdenum (Mo)-dependent nitrogenase which is the most widespread and best characterized of these systems. These systems consist of component 1 (VFe protein, FeFe protein or, MoFe protein respectively) and, component 2 (Fe protein). MoFe is an alpha2beta2 tetramer, V-and Fe- nitrogenases are alpha2beta2delta2 hexamers. The alpha and beta subunits of VFe and FeFe are similar to the alpha and beta subunits of MoFe. For MoFe each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha sub
Probab=61.89 E-value=64 Score=32.52 Aligned_cols=95 Identities=11% Similarity=0.079 Sum_probs=54.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHH-hcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCch
Q 046326 6 LQPHVAVLPSPGLGHLIPLLEFAKRLV-LNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPV 84 (476)
Q Consensus 6 ~~~rIll~~~p~~GHi~P~l~La~~L~-~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (476)
..+||+++.-+. -.+.+++.|. +.| -+|..++... .....++......+ ... +-+. +.
T Consensus 287 ~Gk~vai~~~~~-----~~~~la~~l~~elG-~~v~~i~~~~-~~~~~~~~~~~~~~-~~~-~~v~-----d~------- 345 (415)
T cd01977 287 KGKKVCIWTGGP-----KLWHWTKVIEDELG-MQVVAMSSKF-GHQEDFEKVIARGG-EGT-IYID-----DP------- 345 (415)
T ss_pred CCCEEEEECCCc-----hHHHHHHHHHHhcC-CEEEEEEEEe-ccHHHHHHHHHhcC-Cce-EEEe-----CC-------
Confidence 356787765442 2578888886 788 8887765432 12223333333332 000 0010 00
Q ss_pred HHHHHHHHHHhhcHHHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEE
Q 046326 85 VTRLHAIVEESLSKSLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSF 136 (476)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~ 136 (476)
... .+.+.+++. +||+||.... ...+|+++|||++.+
T Consensus 346 ----------~~~-e~~~~~~~~-~pdliig~s~---~~~~a~~lgip~~~~ 382 (415)
T cd01977 346 ----------NEL-EFFEILEML-KPDIILTGPR---VGELVKKLHVPYVNI 382 (415)
T ss_pred ----------CHH-HHHHHHHhc-CCCEEEecCc---cchhhhhcCCCEEec
Confidence 000 334455677 9999998764 336899999999875
No 192
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=61.54 E-value=24 Score=26.12 Aligned_cols=34 Identities=18% Similarity=-0.084 Sum_probs=29.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEE
Q 046326 7 QPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSF 41 (476)
Q Consensus 7 ~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~ 41 (476)
+.-++++..+...|..-+-.+|+.|+++| ..|..
T Consensus 15 ~k~~v~i~HG~~eh~~ry~~~a~~L~~~G-~~V~~ 48 (79)
T PF12146_consen 15 PKAVVVIVHGFGEHSGRYAHLAEFLAEQG-YAVFA 48 (79)
T ss_pred CCEEEEEeCCcHHHHHHHHHHHHHHHhCC-CEEEE
Confidence 46789999999999999999999999999 55554
No 193
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=61.49 E-value=16 Score=37.47 Aligned_cols=104 Identities=15% Similarity=0.110 Sum_probs=60.8
Q ss_pred eccccchHH---hhccCCccceec---ccCc-hHHHHHHhcCCc----EeeccccchhhhhhhhhcceeeeeEEeccccC
Q 046326 348 VPSWAPQVH---ILRHPSTGGFLS---HCGW-NSTLESICHGVP----MIAWPLYAEQRMNAAMLTAEETGVAVKPETEP 416 (476)
Q Consensus 348 ~~~~~pq~~---iL~~~~~~~~I~---HgG~-~s~~eal~~GvP----~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~ 416 (476)
+.+++++.. ++..+++ ||. +-|+ .++.||+++|+| +|+--+.+- . +...-|+.++.
T Consensus 345 ~~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~-------~--~~~~~g~lv~p-- 411 (460)
T cd03788 345 LYRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGA-------A--EELSGALLVNP-- 411 (460)
T ss_pred EeCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEeccccc-------h--hhcCCCEEECC--
Confidence 345666654 5777886 442 3465 477999999999 544422210 1 11122455544
Q ss_pred CCCCcCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHh
Q 046326 417 GKKVIGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGGSSSDSLASFIKKC 474 (476)
Q Consensus 417 ~~~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 474 (476)
-+.++++++|.++++++.. ..+++.++..+.+. .-+...-+++++++|
T Consensus 412 ----~d~~~la~ai~~~l~~~~~-e~~~~~~~~~~~v~-----~~~~~~w~~~~l~~l 459 (460)
T cd03788 412 ----YDIDEVADAIHRALTMPLE-ERRERHRKLREYVR-----THDVQAWANSFLDDL 459 (460)
T ss_pred ----CCHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHH-----hCCHHHHHHHHHHhh
Confidence 5789999999999987631 12222333333322 456667777887765
No 194
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=60.96 E-value=26 Score=30.25 Aligned_cols=43 Identities=21% Similarity=0.273 Sum_probs=28.3
Q ss_pred HhhcHHHHHHHHhcCCCCEEEECCCcchHH-H--H--HHHc-CCCeEEEec
Q 046326 94 ESLSKSLKSVLTELCNPNALVIDLFCTQAF-E--I--CSQL-SIPTYSFVT 138 (476)
Q Consensus 94 ~~~~~~l~~~l~~~~~pDlVI~D~~~~~~~-~--~--A~~l-gIP~v~~~~ 138 (476)
.... .+.++|++. +||+||+-+.+...+ . + ...+ ++|.+.+.+
T Consensus 76 ~~~~-~l~~~l~~~-~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvT 124 (169)
T PF06925_consen 76 LFAR-RLIRLLREF-QPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVT 124 (169)
T ss_pred HHHH-HHHHHHhhc-CCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEc
Confidence 3445 788889988 999999877654443 2 1 2223 577776655
No 195
>cd01968 Nitrogenase_NifE_I Nitrogenase_NifE_I: a subgroup of the NifE subunit of the NifEN complex: NifE forms an alpha2beta2 tetramer with NifN. NifE and NifN are structurally homologous to nitrogenase MoFe protein alpha and beta subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The NifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this NifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco).
Probab=60.82 E-value=78 Score=31.83 Aligned_cols=34 Identities=26% Similarity=0.272 Sum_probs=26.6
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEE
Q 046326 99 SLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSF 136 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~ 136 (476)
.+.+.+++. +||++|.... ...+|+++|||++..
T Consensus 347 e~~~~i~~~-~pDl~ig~s~---~~~~a~~~gip~~~~ 380 (410)
T cd01968 347 ELKKLLKEK-KADLLVAGGK---ERYLALKLGIPFCDI 380 (410)
T ss_pred HHHHHHhhc-CCCEEEECCc---chhhHHhcCCCEEEc
Confidence 566777777 9999999853 456899999998843
No 196
>TIGR01278 DPOR_BchB light-independent protochlorophyllide reductase, B subunit. This enzyme describes the B subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme. This subunit shows homology to the nitrogenase molybdenum-iron protein. It catalyzes a step in bacteriochlorophyll biosynthesis.
Probab=59.80 E-value=54 Score=34.12 Aligned_cols=36 Identities=14% Similarity=0.215 Sum_probs=29.4
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEec
Q 046326 99 SLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFVT 138 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~ 138 (476)
.+.+.+++. +||+||.+. ....+|+++|||++.++.
T Consensus 355 ei~~~i~~~-~pdliiG~~---~er~~a~~lgip~~~i~~ 390 (511)
T TIGR01278 355 EVADAIAAL-EPELVLGTQ---MERHSAKRLDIPCGVISA 390 (511)
T ss_pred HHHHHHHhc-CCCEEEECh---HHHHHHHHcCCCEEEecC
Confidence 577778888 999999986 466689999999987654
No 197
>PRK05647 purN phosphoribosylglycinamide formyltransferase; Reviewed
Probab=59.54 E-value=1.1e+02 Score=27.25 Aligned_cols=85 Identities=14% Similarity=0.146 Sum_probs=47.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcC-CcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHH
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNH-GVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVT 86 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG-~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (476)
+||+++..+..+-+. +|.+++.+.+ .++|.++.+..+ +. ......... ++.+..++......
T Consensus 2 ~ki~vl~sg~gs~~~---~ll~~~~~~~~~~~I~~vvs~~~-~~-~~~~~a~~~--gIp~~~~~~~~~~~---------- 64 (200)
T PRK05647 2 KRIVVLASGNGSNLQ---AIIDACAAGQLPAEIVAVISDRP-DA-YGLERAEAA--GIPTFVLDHKDFPS---------- 64 (200)
T ss_pred ceEEEEEcCCChhHH---HHHHHHHcCCCCcEEEEEEecCc-cc-hHHHHHHHc--CCCEEEECccccCc----------
Confidence 689999887644333 5666676654 367777655432 22 123333333 77777665311110
Q ss_pred HHHHHHHHhhcHHHHHHHHhcCCCCEEEEC
Q 046326 87 RLHAIVEESLSKSLKSVLTELCNPNALVID 116 (476)
Q Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D 116 (476)
-....+ .+.+.++++ +||++|+-
T Consensus 65 -----~~~~~~-~~~~~l~~~-~~D~iv~~ 87 (200)
T PRK05647 65 -----REAFDA-ALVEALDAY-QPDLVVLA 87 (200)
T ss_pred -----hhHhHH-HHHHHHHHh-CcCEEEhH
Confidence 001122 566778888 99999864
No 198
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=59.36 E-value=1.5e+02 Score=28.83 Aligned_cols=104 Identities=12% Similarity=0.095 Sum_probs=63.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcC-CcEEEEEEccCCcchhhhhhhhhcCCCCceEE-EcCCCCCCCCCCCCCchH
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNH-GVHVSFLVITTNEASAAKNNLLRSLPHGLDVV-DLPPVDVSAVTSDDMPVV 85 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG-~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 85 (476)
|||+++-..+.||+.=...+.+.|+++- +.+|++++.+. .....+..| .++-+ .++. ... .
T Consensus 1 mrILii~~~~iGD~il~tP~l~~Lk~~~P~a~I~~l~~~~------~~~l~~~~P-~vd~vi~~~~-------~~~--~- 63 (348)
T PRK10916 1 MKILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPAW------CRPLLSRMP-EVNEAIPMPL-------GHG--A- 63 (348)
T ss_pred CcEEEEccCcccHHHhHHHHHHHHHHHCCCCeEEEEechh------hHHHHhcCC-ccCEEEeccc-------ccc--h-
Confidence 5799999999999999999999999973 38999998653 334444445 44432 2221 000 0
Q ss_pred HHHHHHHHHhhcHHHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEE
Q 046326 86 TRLHAIVEESLSKSLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYS 135 (476)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~ 135 (476)
..+. ... .+...+++. ++|++|.=.-..-...++...|+|.-.
T Consensus 64 ~~~~-----~~~-~l~~~lr~~-~yD~vidl~~~~~s~~l~~~~~~~~ri 106 (348)
T PRK10916 64 LEIG-----ERR-RLGHSLREK-RYDRAYVLPNSFKSALVPFFAGIPHRT 106 (348)
T ss_pred hhhH-----HHH-HHHHHHHhc-CCCEEEECCCcHHHHHHHHHcCCCeEe
Confidence 0010 011 233334555 999999543334444567777877554
No 199
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=59.28 E-value=26 Score=29.97 Aligned_cols=42 Identities=14% Similarity=0.162 Sum_probs=29.5
Q ss_pred ccc-cchHHhhccCCccceecccCchHHHH---HHhcCCcEeeccc
Q 046326 349 PSW-APQVHILRHPSTGGFLSHCGWNSTLE---SICHGVPMIAWPL 390 (476)
Q Consensus 349 ~~~-~pq~~iL~~~~~~~~I~HgG~~s~~e---al~~GvP~l~~P~ 390 (476)
.++ .+...++...+...++--||.||+.| ++.+++|+++++.
T Consensus 78 ~~~~~~Rk~~m~~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 78 TGMNFARNFILVRSADVVVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred CCCcchHHHHHHHHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 344 44555555555556777899998765 5889999998875
No 200
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=58.63 E-value=1.8e+02 Score=28.09 Aligned_cols=102 Identities=16% Similarity=0.145 Sum_probs=61.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcC-CcEEEEEEccCCcchhhhhhhhhcCCCCce-EEEcCCCCCCCCCCCCCchHH
Q 046326 9 HVAVLPSPGLGHLIPLLEFAKRLVLNH-GVHVSFLVITTNEASAAKNNLLRSLPHGLD-VVDLPPVDVSAVTSDDMPVVT 86 (476)
Q Consensus 9 rIll~~~p~~GHi~P~l~La~~L~~rG-~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 86 (476)
||+++-..+.||+.=...+.+.|++.- +.+|++++.+. .....+..| .++ ++.++.. .. . .
T Consensus 1 rILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~------~~~l~~~~p-~id~v~~~~~~-------~~--~-~ 63 (334)
T TIGR02195 1 KILVIGPSWVGDMVMAQSLYRLLKKRYPQAVIDVLAPAW------CRPLLERMP-EIRQAIDMPLG-------HG--A-L 63 (334)
T ss_pred CEEEEccchhHHHHHHHHHHHHHHHHCCCCEEEEEechh------hHHHHhcCc-hhceeeecCCc-------cc--c-h
Confidence 589999999999999999999999973 38999998653 233444444 333 2222210 00 0 0
Q ss_pred HHHHHHHHhhcHHHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeE
Q 046326 87 RLHAIVEESLSKSLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTY 134 (476)
Q Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v 134 (476)
.+. ... .+...+++. ++|++|.-........++...|+|.-
T Consensus 64 ~~~-----~~~-~~~~~lr~~-~yD~vi~l~~~~~s~ll~~~~~~~~r 104 (334)
T TIGR02195 64 ELT-----ERR-RLGRSLREE-RYDQAIVLPNSLKSALIPFFAGIPHR 104 (334)
T ss_pred hhh-----HHH-HHHHHHhhc-CCCEEEECCCCHHHHHHHHHcCCCce
Confidence 010 111 233445555 99999965444444556666777754
No 201
>TIGR01283 nifE nitrogenase molybdenum-iron cofactor biosynthesis protein NifE. This protein is part of the NifEN complex involved in biosynthesis of the molybdenum-iron cofactor used by the homologous NifDK complex of nitrogenase. In a few species, the protein is found as a NifEN fusion protein.
Probab=58.35 E-value=1e+02 Score=31.50 Aligned_cols=34 Identities=21% Similarity=0.238 Sum_probs=27.2
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEE
Q 046326 99 SLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSF 136 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~ 136 (476)
.+.+++++. +||++|... ....+|+++|||++.+
T Consensus 386 e~~~~i~~~-~pDl~ig~~---~~~~~a~k~giP~i~~ 419 (456)
T TIGR01283 386 ELLKLLLEY-KADLLIAGG---KERYTALKLGIPFCDI 419 (456)
T ss_pred HHHHHHhhc-CCCEEEEcc---chHHHHHhcCCCEEEc
Confidence 577778888 999999863 3456889999998875
No 202
>PRK13931 stationary phase survival protein SurE; Provisional
Probab=57.83 E-value=53 Score=30.68 Aligned_cols=98 Identities=12% Similarity=0.153 Sum_probs=48.5
Q ss_pred HHHHHHHHHhc---CCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHHHHHHHhhcHHH
Q 046326 24 LLEFAKRLVLN---HGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLHAIVEESLSKSL 100 (476)
Q Consensus 24 ~l~La~~L~~r---G~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 100 (476)
+.+|++.|++. | ++|+++.|.. +.+-....+.-. ..+++..+.. ..... .+...- . ..- .+
T Consensus 16 l~aL~~~l~~~~~~~-~~V~VVAP~~--eqSg~ghaiT~~-~pl~~~~~~~-~~yav--~GTPaD-----C---V~l-al 79 (261)
T PRK13931 16 LEVLEQIATELAGPD-GEVWTVAPAF--EQSGVGHCISYT-HPMMIAELGP-RRFAA--EGSPAD-----C---VLA-AL 79 (261)
T ss_pred HHHHHHHHHHhccCC-CeEEEEeCCC--CCCCCcccccCC-CCeEEEEeCC-CeEEE--cCchHH-----H---HHH-HH
Confidence 45677777653 4 7899999885 222111111111 1355555542 10000 010110 1 111 34
Q ss_pred HHHHHhcCCCCEEEE----------CCCcchH---HHHHHHcCCCeEEEec
Q 046326 101 KSVLTELCNPNALVI----------DLFCTQA---FEICSQLSIPTYSFVT 138 (476)
Q Consensus 101 ~~~l~~~~~pDlVI~----------D~~~~~~---~~~A~~lgIP~v~~~~ 138 (476)
..++..- +||+||+ |.+.+.. ..-|..+|||.+.++.
T Consensus 80 ~~~~~~~-~pDlVvSGIN~G~N~g~~v~ySGTVgAA~Ea~~~GiPsiA~S~ 129 (261)
T PRK13931 80 YDVMKDA-PPDLVLSGVNRGNNSAENVLYSGTVGGAMEAALQGLPAIALSQ 129 (261)
T ss_pred HHhcCCC-CCCEEEECCccCCCCCcCcccchhHHHHHHHHhcCCCeEEEEe
Confidence 4455424 8999996 3333322 2345678999999886
No 203
>PF00551 Formyl_trans_N: Formyl transferase; InterPro: IPR002376 A number of formyl transferases belong to this group. Methionyl-tRNA formyltransferase transfers a formyl group onto the amino terminus of the acyl moiety of the methionyl aminoacyl-tRNA. The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and by impairing its binding to EFTU-GTP. Formyltetrahydrofolate dehydrogenase produces formate from formyl- tetrahydrofolate. This is the N-terminal domain of these enzymes and is found upstream of the C-terminal domain (IPR005793 from INTERPRO). The trifunctional glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide synthetase-glycinamide ribonucleotide transformylase catalyses the second, third and fifth steps in de novo purine biosynthesis. The glycinamide ribonucleotide transformylase belongs to this group.; GO: 0016742 hydroxymethyl-, formyl- and related transferase activity, 0009058 biosynthetic process; PDB: 3P9X_B 3OBI_A 3R8X_A 3KCQ_C 3RFO_D 3AV3_A 3N0V_D 3LOU_A 3O1L_A 4DS3_A ....
Probab=57.47 E-value=77 Score=27.68 Aligned_cols=107 Identities=12% Similarity=0.105 Sum_probs=54.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCcE--EEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchH
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNHGVH--VSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVV 85 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG~h~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (476)
|||+|+..++. .-+..+.++|.+++ |. +..+.+..+....+-... . . ++....+... ..
T Consensus 1 mrI~~~~Sg~~---~~~~~~l~~l~~~~-~~~~iv~Vit~~~~~~~~~~~~-~-~--~~~~~~~~~~---~~-------- 61 (181)
T PF00551_consen 1 MRIVFFGSGSG---SFLKALLEALKARG-HNVEIVLVITNPDKPRGRSRAI-K-N--GIPAQVADEK---NF-------- 61 (181)
T ss_dssp EEEEEEESSSS---HHHHHHHHHHHTTS-SEEEEEEEEESSTTTHHHHHHH-H-T--THHEEEHHGG---GS--------
T ss_pred CEEEEEEcCCC---HHHHHHHHHHHhCC-CCceEEEEeccccccccccccc-c-C--CCCEEecccc---CC--------
Confidence 68888866554 45667788999998 87 555554432222111111 1 1 2333222210 00
Q ss_pred HHHHHHHHHhhcHHHHHHHHhcCCCCEEEECCCc-chHHHHHHHcCCCeEEEecc
Q 046326 86 TRLHAIVEESLSKSLKSVLTELCNPNALVIDLFC-TQAFEICSQLSIPTYSFVTT 139 (476)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~-~~~~~~A~~lgIP~v~~~~~ 139 (476)
.......+ .+.+.++++ +||++|+-.+. .-...+-+.....++-++++
T Consensus 62 ----~~~~~~~~-~~~~~l~~~-~~Dl~v~~~~~~il~~~~l~~~~~~~iNiHps 110 (181)
T PF00551_consen 62 ----QPRSENDE-ELLELLESL-NPDLIVVAGYGRILPKEFLSIPPYGIINIHPS 110 (181)
T ss_dssp ----SSHHHHHH-HHHHHHHHT-T-SEEEESS-SS---HHHHHHSTTSEEEEESS
T ss_pred ----CchHhhhh-HHHHHHHhh-ccceeehhhhHHHhhhhhhhcccccEEEEeec
Confidence 00011223 677888888 99999875432 33334556666677776653
No 204
>PF02572 CobA_CobO_BtuR: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; InterPro: IPR003724 ATP:cob(I)alamin (or ATP:corrinoid) adenosyltransferases (2.5.1.17 from EC), catalyse the conversion of cobalamin (vitamin B12) into its coenzyme form, adenosylcobalamin (coenzyme B12) []. Adenosylcobalamin (AdoCbl) is required for the ativity of certain enzymes. AdoCbl contains an adenosyl moiety liganded to the cobalt ion of cobalamin via a covalent Co-C bond, and its synthesis is unique to certain prokaryotes. ATP:cob(I)alamin adenosyltransferases are classed into three groups: CobA-type [], EutT-type [] and PduO-type []. Each of the three enzyme types appears to be specialised for particular AdoCbl-dependent enzymes or for the de novo synthesis AdoCbl. PduO and EutT are distantly related, sharing short conserved motifs, while CobA is evolutionarily unrelated and is an example of convergent evolution. This entry represents the ATP:cob(I)alamin adenosyltransferases CobA (Salmonella typhimurium), CobO (Pseudomonas denitrificans), and ButR (Escherichia coli). There is a high degree of sequence identity between these proteins []. CobA is responsible for attaching the adenosyl moiety from ATP to the cobalt ion of the corrin ring, necessary for the convertion of cobalamin to adenosylcobalamin [, ]. ; GO: 0005524 ATP binding, 0008817 cob(I)yrinic acid a,c-diamide adenosyltransferase activity, 0009236 cobalamin biosynthetic process; PDB: 1G64_A 1G5T_A 1G5R_A.
Probab=57.31 E-value=1.2e+02 Score=26.36 Aligned_cols=104 Identities=15% Similarity=0.163 Sum_probs=46.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCC-cchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchH
Q 046326 7 QPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTN-EASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVV 85 (476)
Q Consensus 7 ~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (476)
+..|-+++..+.|-....+.+|-+-.-+| .+|.++-.-.. ..... ......++ ++.+..... +.+....+..
T Consensus 3 ~G~i~vytG~GKGKTTAAlGlalRA~G~G-~rV~ivQFlKg~~~~GE-~~~l~~l~-~~~~~~~g~----~f~~~~~~~~ 75 (172)
T PF02572_consen 3 RGLIQVYTGDGKGKTTAALGLALRAAGHG-MRVLIVQFLKGGRYSGE-LKALKKLP-NVEIERFGK----GFVWRMNEEE 75 (172)
T ss_dssp ---EEEEESSSS-HHHHHHHHHHHHHCTT---EEEEESS--SS--HH-HHHHGGGT---EEEE--T----T----GGGHH
T ss_pred CcEEEEEeCCCCCchHHHHHHHHHHHhCC-CEEEEEEEecCCCCcCH-HHHHHhCC-eEEEEEcCC----cccccCCCcH
Confidence 34578889999999887776666666666 78888775432 11111 12234444 577777764 2211111111
Q ss_pred HHHHHHHHHhhcHHHHHHHHhcCCCCEEEECCCcc
Q 046326 86 TRLHAIVEESLSKSLKSVLTELCNPNALVIDLFCT 120 (476)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~ 120 (476)
.. ......... ..++.+..- .+|+||.|....
T Consensus 76 ~~-~~~~~~~~~-~a~~~i~~~-~~dlvILDEi~~ 107 (172)
T PF02572_consen 76 ED-RAAAREGLE-EAKEAISSG-EYDLVILDEINY 107 (172)
T ss_dssp HH-HHHHHHHHH-HHHHHTT-T-T-SEEEEETHHH
T ss_pred HH-HHHHHHHHH-HHHHHHhCC-CCCEEEEcchHH
Confidence 11 122222222 333333333 999999997543
No 205
>TIGR01284 alt_nitrog_alph nitrogenase alpha chain. This model represents the alpha chains of various forms of the nitrogen-fixing enzyme nitrogenase: vanadium-iron, iron-iron, and molybdenum-iron. Most examples of NifD, the molybdenum-iron type nitrogenase alpha chain, are excluded from this model and described instead by equivalog model TIGR01282. It appears by phylogenetic and UPGMA trees that this model represents a distinct clade of NifD homologs, in which arose several molybdenum-independent forms.
Probab=56.78 E-value=75 Score=32.53 Aligned_cols=34 Identities=15% Similarity=0.430 Sum_probs=27.1
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEE
Q 046326 99 SLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSF 136 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~ 136 (476)
.+.+.+++. +||++|.... ...+|+++|||++.+
T Consensus 386 e~~~~i~~~-~pDllig~~~---~~~~a~k~gip~~~~ 419 (457)
T TIGR01284 386 ELEEIIEKY-KPDIILTGIR---EGELAKKLGVPYINI 419 (457)
T ss_pred HHHHHHHhc-CCCEEEecCC---cchhhhhcCCCEEEc
Confidence 456667777 9999998763 456899999999875
No 206
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=56.75 E-value=2e+02 Score=28.10 Aligned_cols=63 Identities=16% Similarity=0.169 Sum_probs=49.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCC
Q 046326 5 SLQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVD 73 (476)
Q Consensus 5 ~~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (476)
+++.|+.++..|--||--.|--=|..|++.| .+|.++.--...- ..+... .| .++++.++...
T Consensus 10 ~~k~ra~vvVLGDvGRSPRMqYHA~Sla~~g-f~VdliGy~~s~p---~e~l~~-hp-rI~ih~m~~l~ 72 (444)
T KOG2941|consen 10 SKKKRAIVVVLGDVGRSPRMQYHALSLAKLG-FQVDLIGYVESIP---LEELLN-HP-RIRIHGMPNLP 72 (444)
T ss_pred cccceEEEEEecccCCChHHHHHHHHHHHcC-CeEEEEEecCCCC---hHHHhc-CC-ceEEEeCCCCc
Confidence 5688999999999999999999999999999 9999987543111 222222 45 89999998754
No 207
>PRK08506 replicative DNA helicase; Provisional
Probab=56.69 E-value=1.1e+02 Score=31.42 Aligned_cols=36 Identities=17% Similarity=0.337 Sum_probs=31.6
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
|++...|+.|-..=.+.+|......| +.|.|++.+-
T Consensus 195 ivIaarpg~GKT~fal~ia~~~~~~g-~~V~~fSlEM 230 (472)
T PRK08506 195 IIIAARPSMGKTTLCLNMALKALNQD-KGVAFFSLEM 230 (472)
T ss_pred EEEEcCCCCChHHHHHHHHHHHHhcC-CcEEEEeCcC
Confidence 56677789999999999999998888 9999998875
No 208
>cd01424 MGS_CPS_II Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP). CSP, a CarA and CarB heterodimer, catalyzes the production of carbamoyl phosphate which is subsequently employed in the metabolic pathways responsible for the synthesis of pyrimidine nucleotides or arginine. The MGS-like domain is the C-terminal domain of CarB and appears to play a regulatory role in CPS function by binding allosteric effector molecules, including UMP and ornithine.
Probab=56.23 E-value=97 Score=24.33 Aligned_cols=84 Identities=13% Similarity=0.112 Sum_probs=52.5
Q ss_pred cCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHHHHHHHhhcH
Q 046326 19 GHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLHAIVEESLSK 98 (476)
Q Consensus 19 GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (476)
.+=.=++.+++.|.+.| +++. ++..+ . +..... |+.+..+.... + ..+
T Consensus 10 ~~k~~~~~~~~~l~~~G-~~l~-aT~gT---~----~~l~~~--gi~~~~v~~~~--~------------------~~~- 57 (110)
T cd01424 10 RDKPEAVEIAKRLAELG-FKLV-ATEGT---A----KYLQEA--GIPVEVVNKVS--E------------------GRP- 57 (110)
T ss_pred CcHhHHHHHHHHHHHCC-CEEE-EchHH---H----HHHHHc--CCeEEEEeecC--C------------------Cch-
Confidence 35567889999999999 7773 44332 1 222222 67766554211 0 223
Q ss_pred HHHHHHHhcCCCCEEEECCC-------cchHHHHHHHcCCCeEE
Q 046326 99 SLKSVLTELCNPNALVIDLF-------CTQAFEICSQLSIPTYS 135 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~-------~~~~~~~A~~lgIP~v~ 135 (476)
.+.+++++- ++|+||.-.. .+.-...|-.+|||+++
T Consensus 58 ~i~~~i~~~-~id~vIn~~~~~~~~~~~~~iRR~Av~~~ipl~T 100 (110)
T cd01424 58 NIVDLIKNG-EIQLVINTPSGKRAIRDGFSIRRAALEYKVPYFT 100 (110)
T ss_pred hHHHHHHcC-CeEEEEECCCCCccCccHHHHHHHHHHhCCCEEe
Confidence 567777776 9999997321 23344589999999985
No 209
>PRK14478 nitrogenase molybdenum-cofactor biosynthesis protein NifE; Provisional
Probab=56.06 E-value=1.1e+02 Score=31.59 Aligned_cols=33 Identities=15% Similarity=0.213 Sum_probs=26.4
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEE
Q 046326 99 SLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYS 135 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~ 135 (476)
.+.+.+++. +||++|.+ .....+|+++|||++-
T Consensus 384 e~~~~i~~~-~pDliig~---s~~~~~a~k~giP~~~ 416 (475)
T PRK14478 384 ELYKMLKEA-KADIMLSG---GRSQFIALKAGMPWLD 416 (475)
T ss_pred HHHHHHhhc-CCCEEEec---CchhhhhhhcCCCEEE
Confidence 456667777 99999997 4566789999999884
No 210
>PRK05595 replicative DNA helicase; Provisional
Probab=55.66 E-value=75 Score=32.38 Aligned_cols=36 Identities=14% Similarity=0.239 Sum_probs=30.0
Q ss_pred EEEEcCCCccCHHHHHHHHHHHH-hcCCcEEEEEEccC
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLV-LNHGVHVSFLVITT 46 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~-~rG~h~V~~~~~~~ 46 (476)
|++...|+.|-..=++.+|..++ +.| +.|.+++.+-
T Consensus 204 iviaarpg~GKT~~al~ia~~~a~~~g-~~vl~fSlEm 240 (444)
T PRK05595 204 ILIAARPSMGKTTFALNIAEYAALREG-KSVAIFSLEM 240 (444)
T ss_pred EEEEecCCCChHHHHHHHHHHHHHHcC-CcEEEEecCC
Confidence 45667789999999999999876 568 9999998774
No 211
>PRK06849 hypothetical protein; Provisional
Probab=55.57 E-value=68 Score=31.94 Aligned_cols=35 Identities=14% Similarity=0.010 Sum_probs=26.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEcc
Q 046326 6 LQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVIT 45 (476)
Q Consensus 6 ~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~ 45 (476)
.+++|+++-... .-.+.+++.|.++| |+|.++...
T Consensus 3 ~~~~VLI~G~~~----~~~l~iar~l~~~G-~~Vi~~d~~ 37 (389)
T PRK06849 3 TKKTVLITGARA----PAALELARLFHNAG-HTVILADSL 37 (389)
T ss_pred CCCEEEEeCCCc----HHHHHHHHHHHHCC-CEEEEEeCC
Confidence 467888874333 25889999999999 999988654
No 212
>PRK06321 replicative DNA helicase; Provisional
Probab=55.46 E-value=62 Score=33.26 Aligned_cols=36 Identities=17% Similarity=0.379 Sum_probs=30.2
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHh-cCCcEEEEEEccC
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVL-NHGVHVSFLVITT 46 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~-rG~h~V~~~~~~~ 46 (476)
|++..-|+.|-..-.+.+|...+. .| +.|.|++.+-
T Consensus 229 iiiaarPgmGKTafal~ia~~~a~~~g-~~v~~fSLEM 265 (472)
T PRK06321 229 MILAARPAMGKTALALNIAENFCFQNR-LPVGIFSLEM 265 (472)
T ss_pred EEEEeCCCCChHHHHHHHHHHHHHhcC-CeEEEEeccC
Confidence 566777999999999999999874 57 8899998774
No 213
>COG2120 Uncharacterized proteins, LmbE homologs [Function unknown]
Probab=55.15 E-value=22 Score=32.76 Aligned_cols=40 Identities=20% Similarity=0.100 Sum_probs=24.2
Q ss_pred CCCCEEEEE-cCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 5 SLQPHVAVL-PSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 5 ~~~~rIll~-~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
+.+++|+++ +.|-- =..=+=.....|+++| |+|++++.+.
T Consensus 8 ~~~~~vL~v~aHPDD-e~~g~ggtla~~~~~G-~~V~v~~lT~ 48 (237)
T COG2120 8 LDPLRVLVVFAHPDD-EEIGCGGTLAKLAARG-VEVTVVCLTL 48 (237)
T ss_pred ccCCcEEEEecCCcc-hhhccHHHHHHHHHCC-CeEEEEEccC
Confidence 456777544 44421 1112334556668999 9999999775
No 214
>TIGR02015 BchY chlorophyllide reductase subunit Y. This model represents the Y subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase.
Probab=54.42 E-value=1.5e+02 Score=30.07 Aligned_cols=93 Identities=17% Similarity=0.230 Sum_probs=52.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCC--cchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchH
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTN--EASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVV 85 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (476)
.|+.++..+.. .+.+++.|.+-| -+|..+.+..+ .-.+........+ +. .. ..+.++.
T Consensus 286 gkv~v~g~~~~-----~~~l~~~l~elG-mevv~~~t~~~~~~~~~~~~~~~~~~--~~-----------~v-~~~~dl~ 345 (422)
T TIGR02015 286 GRVTVSGYEGS-----ELLVVRLLLESG-ADVPYVGTAIPRTAWGAEDKRWLEML--GV-----------EV-KYRASLE 345 (422)
T ss_pred CeEEEEcCCcc-----HHHHHHHHHHCC-CEEEEEecCCCCccccHHHHHHHHhc--CC-----------Cc-eeccCHH
Confidence 47777776655 788888999998 77777654421 0011111111111 00 01 1111111
Q ss_pred HHHHHHHHHhhcHHHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEe
Q 046326 86 TRLHAIVEESLSKSLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFV 137 (476)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~ 137 (476)
+ .+ +.+++. +||++|... -...+|+++|||.+-+.
T Consensus 346 -----------~-~~-~~l~~~-~pDllig~s---~~~~~A~k~gIP~vr~g 380 (422)
T TIGR02015 346 -----------D-DM-EAVLEF-EPDLAIGTT---PLVQFAKEHGIPALYFT 380 (422)
T ss_pred -----------H-HH-HHHhhC-CCCEEEcCC---cchHHHHHcCCCEEEec
Confidence 1 12 344666 999999874 35568999999999754
No 215
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=53.86 E-value=89 Score=29.12 Aligned_cols=39 Identities=15% Similarity=0.175 Sum_probs=25.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 5 SLQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 5 ~~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
.++|||++.-==+. |--=+.+|+++|++.| +|+++.|..
T Consensus 3 ~~~M~ILltNDDGi-~a~Gi~aL~~~l~~~g--~V~VvAP~~ 41 (257)
T PRK13932 3 DKKPHILVCNDDGI-EGEGIHVLAASMKKIG--RVTVVAPAE 41 (257)
T ss_pred CCCCEEEEECCCCC-CCHHHHHHHHHHHhCC--CEEEEcCCC
Confidence 35688887643111 1124678899998876 488888774
No 216
>cd01965 Nitrogenase_MoFe_beta_like Nitrogenase_MoFe_beta_like: Nitrogenase MoFe protein, beta subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. This group contains the beta subunits of component 1 of the three known genetically distinct types of nitrogenase systems: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium-dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. For MoFe, each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (Fe
Probab=53.47 E-value=1.5e+02 Score=30.05 Aligned_cols=36 Identities=19% Similarity=0.158 Sum_probs=28.5
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEec
Q 046326 99 SLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFVT 138 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~ 138 (476)
.+.+.+++. +||+||.+.. ...+|+++|+|++.++.
T Consensus 362 el~~~i~~~-~pdliig~~~---~~~~a~~~~ip~i~~~~ 397 (428)
T cd01965 362 DLESLAKEE-PVDLLIGNSH---GRYLARDLGIPLVRVGF 397 (428)
T ss_pred HHHHHhhcc-CCCEEEECch---hHHHHHhcCCCEEEecC
Confidence 566777777 9999999864 46789999999986543
No 217
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=53.15 E-value=43 Score=29.86 Aligned_cols=60 Identities=18% Similarity=0.009 Sum_probs=43.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcC
Q 046326 6 LQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLP 70 (476)
Q Consensus 6 ~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (476)
++.+|++.+.++-.|-....-++..|+.+| ++|+++....| ...+...+... +.+++.+.
T Consensus 81 ~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G-~~vi~lG~~~p--~~~l~~~~~~~--~~d~v~lS 140 (201)
T cd02070 81 KKGKVVIGTVEGDIHDIGKNLVATMLEANG-FEVIDLGRDVP--PEEFVEAVKEH--KPDILGLS 140 (201)
T ss_pred CCCeEEEEecCCccchHHHHHHHHHHHHCC-CEEEECCCCCC--HHHHHHHHHHc--CCCEEEEe
Confidence 367999999999999999999999999999 99988775532 22233333333 45555554
No 218
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.04 E-value=16 Score=34.49 Aligned_cols=83 Identities=12% Similarity=0.124 Sum_probs=49.1
Q ss_pred ccchHHhhccCCccceecccCchH-HHHHHhcCCcEeeccccchhhhhh--hhhcceeeeeEEeccccCCCCCcCHHHHH
Q 046326 351 WAPQVHILRHPSTGGFLSHCGWNS-TLESICHGVPMIAWPLYAEQRMNA--AMLTAEETGVAVKPETEPGKKVIGREEIE 427 (476)
Q Consensus 351 ~~pq~~iL~~~~~~~~I~HgG~~s-~~eal~~GvP~l~~P~~~DQ~~na--~~~~~~~~G~G~~l~~~~~~~~~~~~~l~ 427 (476)
|-...++|.+.++ .|--. || +-+++-.|+|+|.+|-.+-|+.-. .+= ..-+|+.+.+-. - +++.+
T Consensus 302 qqsfadiLH~ada--algmA--GTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ-~rLLG~sltlv~------~-~aq~a 369 (412)
T COG4370 302 QQSFADILHAADA--ALGMA--GTATEQAVGLGKPVIGFPGQGPQYNPGFAERQ-QRLLGASLTLVR------P-EAQAA 369 (412)
T ss_pred HHHHHHHHHHHHH--HHHhc--cchHHHhhccCCceeecCCCCCCcChHHHHHH-HHHhcceeeecC------C-chhhH
Confidence 3334456665553 33333 33 345788999999999999997643 322 123577766655 2 23333
Q ss_pred HHH-HHHhcCChhHHHHHHHHH
Q 046326 428 RVV-RLVMEGEEGKVMRRRVQE 448 (476)
Q Consensus 428 ~ai-~~~l~~~~~~~~~~~a~~ 448 (476)
..+ ++++.|+. +.+++++
T Consensus 370 ~~~~q~ll~dp~---r~~air~ 388 (412)
T COG4370 370 AQAVQELLGDPQ---RLTAIRH 388 (412)
T ss_pred HHHHHHHhcChH---HHHHHHh
Confidence 334 44899988 5555553
No 219
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=53.04 E-value=87 Score=31.47 Aligned_cols=60 Identities=17% Similarity=0.146 Sum_probs=44.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC--CcchhhhhhhhhcCCCCceEEEc
Q 046326 7 QPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT--NEASAAKNNLLRSLPHGLDVVDL 69 (476)
Q Consensus 7 ~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 69 (476)
+--|+++-.=+.|-..-.-.||+.|+++| +.|.++..+. |.....++...+.. ++.|...
T Consensus 100 P~vImmvGLQGsGKTTt~~KLA~~lkk~~-~kvllVaaD~~RpAA~eQL~~La~q~--~v~~f~~ 161 (451)
T COG0541 100 PTVILMVGLQGSGKTTTAGKLAKYLKKKG-KKVLLVAADTYRPAAIEQLKQLAEQV--GVPFFGS 161 (451)
T ss_pred CeEEEEEeccCCChHhHHHHHHHHHHHcC-CceEEEecccCChHHHHHHHHHHHHc--CCceecC
Confidence 34466666678899999999999999999 9999999886 33444555555554 6666554
No 220
>PRK06027 purU formyltetrahydrofolate deformylase; Reviewed
Probab=52.88 E-value=1.6e+02 Score=27.93 Aligned_cols=87 Identities=18% Similarity=0.253 Sum_probs=50.8
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhcC-CcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCC
Q 046326 4 ESLQPHVAVLPSPGLGHLIPLLEFAKRLVLNH-GVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDM 82 (476)
Q Consensus 4 ~~~~~rIll~~~p~~GHi~P~l~La~~L~~rG-~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (476)
..+++||+++..+....+.-++ ++..... +++|.++....+ + .....+.. ++.+..++... ..
T Consensus 86 ~~~~~ri~vl~Sg~gsnl~al~---~~~~~~~~~~~i~~visn~~-~---~~~lA~~~--gIp~~~~~~~~-~~------ 149 (286)
T PRK06027 86 SAERKRVVILVSKEDHCLGDLL---WRWRSGELPVEIAAVISNHD-D---LRSLVERF--GIPFHHVPVTK-ET------ 149 (286)
T ss_pred cccCcEEEEEEcCCCCCHHHHH---HHHHcCCCCcEEEEEEEcCh-h---HHHHHHHh--CCCEEEeccCc-cc------
Confidence 3678999999998866655444 4444421 278888876542 2 22223333 78887775321 00
Q ss_pred chHHHHHHHHHHhhcHHHHHHHHhcCCCCEEEECC
Q 046326 83 PVVTRLHAIVEESLSKSLKSVLTELCNPNALVIDL 117 (476)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~ 117 (476)
...... .+.++++++ ++|+||.-.
T Consensus 150 ---------~~~~~~-~~~~~l~~~-~~Dlivlag 173 (286)
T PRK06027 150 ---------KAEAEA-RLLELIDEY-QPDLVVLAR 173 (286)
T ss_pred ---------cchhHH-HHHHHHHHh-CCCEEEEec
Confidence 001112 466777888 999999643
No 221
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=51.65 E-value=1.1e+02 Score=30.23 Aligned_cols=103 Identities=20% Similarity=0.322 Sum_probs=62.0
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHH
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLH 89 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (476)
+++.--|+.|--.=++.++..+.++| ..|.+++.+.. ...+.....++ ++....+- -. .+
T Consensus 85 vLI~G~pG~GKStLllq~a~~~a~~g-~~VlYvs~EEs--~~qi~~Ra~rl--g~~~~~l~-----l~-~e--------- 144 (372)
T cd01121 85 ILIGGDPGIGKSTLLLQVAARLAKRG-GKVLYVSGEES--PEQIKLRADRL--GISTENLY-----LL-AE--------- 144 (372)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHhcC-CeEEEEECCcC--HHHHHHHHHHc--CCCcccEE-----EE-cc---------
Confidence 45555578999999999999999998 88988887642 22232222232 22211110 00 00
Q ss_pred HHHHHhhcHHHHHHHHhcCCCCEEEECCCcch---------------------HHHHHHHcCCCeEEEec
Q 046326 90 AIVEESLSKSLKSVLTELCNPNALVIDLFCTQ---------------------AFEICSQLSIPTYSFVT 138 (476)
Q Consensus 90 ~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~---------------------~~~~A~~lgIP~v~~~~ 138 (476)
.... .+.+.+++. ++|+||.|..... -..+|+..|++++++..
T Consensus 145 ----~~le-~I~~~i~~~-~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~lak~~~itvilvgh 208 (372)
T cd01121 145 ----TNLE-DILASIEEL-KPDLVIIDSIQTVYSSELTSAPGSVSQVRECTAELMRFAKERNIPIFIVGH 208 (372)
T ss_pred ----CcHH-HHHHHHHhc-CCcEEEEcchHHhhccccccCCCCHHHHHHHHHHHHHHHHHcCCeEEEEee
Confidence 0112 444555666 9999999975321 11368889999888753
No 222
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=51.59 E-value=2.4e+02 Score=27.40 Aligned_cols=106 Identities=17% Similarity=0.116 Sum_probs=62.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcC-CcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchH
Q 046326 7 QPHVAVLPSPGLGHLIPLLEFAKRLVLNH-GVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVV 85 (476)
Q Consensus 7 ~~rIll~~~p~~GHi~P~l~La~~L~~rG-~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (476)
.|+|+++-....||+.=.+.+-..|+++. +.++++++.+. .....+..| .++-+-.-. .....
T Consensus 1 ~~kIliir~~~iGD~vlt~p~~~~lk~~~P~a~i~~~~~~~------~~~i~~~~p-~I~~vi~~~-------~~~~~-- 64 (334)
T COG0859 1 MMKILVIRLSKLGDVVLTLPLLRTLKKAYPNAKIDVLVPKG------FAPILKLNP-EIDKVIIID-------KKKKG-- 64 (334)
T ss_pred CceEEEEeccchhHHHhHHHHHHHHHHHCCCCEEEEEeccc------hHHHHhcCh-Hhhhhcccc-------ccccc--
Confidence 37899999999999999999999999987 57888888764 223333333 222111100 00111
Q ss_pred HHHHHHHHHhhcHHHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEE
Q 046326 86 TRLHAIVEESLSKSLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYS 135 (476)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~ 135 (476)
..+.. .. .+...+++. ++|+||.=.-..-...++...++|.-.
T Consensus 65 ~~~~~-----~~-~l~~~lr~~-~yD~vidl~~~~ksa~l~~~~~~~~r~ 107 (334)
T COG0859 65 LGLKE-----RL-ALLRTLRKE-RYDAVIDLQGLLKSALLALLLGIPFRI 107 (334)
T ss_pred cchHH-----HH-HHHHHhhcc-CCCEEEECcccHHHHHHHHHhCCCccc
Confidence 00111 11 344445555 899999654444455566677777543
No 223
>PLN02470 acetolactate synthase
Probab=51.56 E-value=48 Score=35.16 Aligned_cols=28 Identities=18% Similarity=0.356 Sum_probs=23.0
Q ss_pred CccceecccCc------hHHHHHHhcCCcEeecc
Q 046326 362 STGGFLSHCGW------NSTLESICHGVPMIAWP 389 (476)
Q Consensus 362 ~~~~~I~HgG~------~s~~eal~~GvP~l~~P 389 (476)
.++++++|.|- +.+++|...++|+|++.
T Consensus 76 ~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 76 KVGVCIATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred CCEEEEECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 45568888884 48899999999999995
No 224
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=51.37 E-value=27 Score=31.05 Aligned_cols=40 Identities=13% Similarity=-0.010 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 6 LQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 6 ~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
+.+||++--.|+.|=+.-...|.++|.++| |+|.++.++.
T Consensus 4 ~~k~IllgVTGsiaa~k~a~~lir~L~k~G-~~V~vv~T~a 43 (196)
T PRK08305 4 KGKRIGFGLTGSHCTYDEVMPEIEKLVDEG-AEVTPIVSYT 43 (196)
T ss_pred CCCEEEEEEcCHHHHHHHHHHHHHHHHhCc-CEEEEEECHh
Confidence 467888877776665554789999999999 9999988663
No 225
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=51.23 E-value=94 Score=29.62 Aligned_cols=54 Identities=17% Similarity=0.192 Sum_probs=36.4
Q ss_pred cCCccceecccCchHHHHHHhc----CCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhc
Q 046326 360 HPSTGGFLSHCGWNSTLESICH----GVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVME 435 (476)
Q Consensus 360 ~~~~~~~I~HgG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~ 435 (476)
.++ .+|+-||-||+.+++.. ++|++.+- .-++ |.- -.++.+++.++|.++++
T Consensus 63 ~~d--~vi~~GGDGt~l~~~~~~~~~~~pilGIn--------~G~l-------GFL-------~~~~~~~~~~~l~~~~~ 118 (291)
T PRK02155 63 RAD--LAVVLGGDGTMLGIGRQLAPYGVPLIGIN--------HGRL-------GFI-------TDIPLDDMQETLPPMLA 118 (291)
T ss_pred CCC--EEEEECCcHHHHHHHHHhcCCCCCEEEEc--------CCCc-------ccc-------ccCCHHHHHHHHHHHHc
Confidence 456 49999999999999774 56777663 2111 211 13567788888888876
Q ss_pred CC
Q 046326 436 GE 437 (476)
Q Consensus 436 ~~ 437 (476)
++
T Consensus 119 g~ 120 (291)
T PRK02155 119 GN 120 (291)
T ss_pred CC
Confidence 54
No 226
>PRK14099 glycogen synthase; Provisional
Probab=51.15 E-value=23 Score=36.50 Aligned_cols=83 Identities=11% Similarity=0.134 Sum_probs=46.3
Q ss_pred EeccccchHH-hh-ccCCccceec---ccCc-hHHHHHHhcCCcEeeccccc--hhhhhhhhhccee--eeeEEeccccC
Q 046326 347 VVPSWAPQVH-IL-RHPSTGGFLS---HCGW-NSTLESICHGVPMIAWPLYA--EQRMNAAMLTAEE--TGVAVKPETEP 416 (476)
Q Consensus 347 ~~~~~~pq~~-iL-~~~~~~~~I~---HgG~-~s~~eal~~GvP~l~~P~~~--DQ~~na~~~~~~~--~G~G~~l~~~~ 416 (476)
...+|-.+.. ++ ..+++ ||. +=|. .+.+||+++|+|.|+....+ |........ .+. .+.|+.++.
T Consensus 354 ~~~G~~~~l~~~~~a~aDi--fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~-~~~~~~~~G~l~~~-- 428 (485)
T PRK14099 354 VVIGYDEALAHLIQAGADA--LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEM-AIATGVATGVQFSP-- 428 (485)
T ss_pred EEeCCCHHHHHHHHhcCCE--EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeeccccc-ccccCCCceEEeCC--
Confidence 4557643332 33 34664 654 2333 47789999998777654322 222111110 011 146777765
Q ss_pred CCCCcCHHHHHHHHHH---HhcCCh
Q 046326 417 GKKVIGREEIERVVRL---VMEGEE 438 (476)
Q Consensus 417 ~~~~~~~~~l~~ai~~---~l~~~~ 438 (476)
-++++|.++|.+ +++|++
T Consensus 429 ----~d~~~La~ai~~a~~l~~d~~ 449 (485)
T PRK14099 429 ----VTADALAAALRKTAALFADPV 449 (485)
T ss_pred ----CCHHHHHHHHHHHHHHhcCHH
Confidence 478999999987 555654
No 227
>PRK01077 cobyrinic acid a,c-diamide synthase; Validated
Probab=50.76 E-value=1.4e+02 Score=30.55 Aligned_cols=106 Identities=14% Similarity=0.163 Sum_probs=60.8
Q ss_pred EEEEEcC-CCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHH
Q 046326 9 HVAVLPS-PGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTR 87 (476)
Q Consensus 9 rIll~~~-p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (476)
+|+|... ..-|-..-...|++.|+++| ++|..+=+.+..-...+-.... +.....+ +.. .+
T Consensus 5 ~i~I~gt~s~~GKT~it~~L~~~L~~~G-~~V~~fK~Gpd~~d~~~~~~~~----g~~~~~l-----d~~-----~~--- 66 (451)
T PRK01077 5 ALVIAAPASGSGKTTVTLGLMRALRRRG-LRVQPFKVGPDYIDPAYHTAAT----GRPSRNL-----DSW-----MM--- 66 (451)
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHhCC-CCcceeecCCCcccHHHHHHHh----CCCcccC-----Cce-----eC---
Confidence 5666544 45689999999999999999 8888775532111111111100 1110000 000 00
Q ss_pred HHHHHHHhhcHHHHHHHHhcC-CCCEEEECCC------------cchHHHHHHHcCCCeEEEeccc
Q 046326 88 LHAIVEESLSKSLKSVLTELC-NPNALVIDLF------------CTQAFEICSQLSIPTYSFVTTS 140 (476)
Q Consensus 88 ~~~~~~~~~~~~l~~~l~~~~-~pDlVI~D~~------------~~~~~~~A~~lgIP~v~~~~~~ 140 (476)
... .+++.++.+. +.|++|++-. .....++|+.++.|++++....
T Consensus 67 -------~~~-~v~~~~~~~~~~~D~vlVEGagGl~~g~~~~~~~~s~adiA~~l~~pviLV~~~~ 124 (451)
T PRK01077 67 -------GEE-LVRALFARAAQGADIAVIEGVMGLFDGAGSDPDEGSTADIAKLLGAPVVLVVDAS 124 (451)
T ss_pred -------CHH-HHHHHHHHhcccCCEEEEECCCccccCCccCCCCCCHHHHHHHhCCCEEEEECCc
Confidence 112 4555665554 7899996432 1235679999999999998654
No 228
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=50.53 E-value=1.8e+02 Score=25.65 Aligned_cols=48 Identities=21% Similarity=0.258 Sum_probs=28.9
Q ss_pred ccCHHHH-HHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCC
Q 046326 18 LGHLIPL-LEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPV 72 (476)
Q Consensus 18 ~GHi~P~-l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (476)
.|=+--+ -.|+..|+++| |+|++.+........ .... .|++.+.++.+
T Consensus 16 YGGfET~ve~L~~~l~~~g-~~v~Vyc~~~~~~~~-----~~~y-~gv~l~~i~~~ 64 (185)
T PF09314_consen 16 YGGFETFVEELAPRLVSKG-IDVTVYCRSDYYPYK-----EFEY-NGVRLVYIPAP 64 (185)
T ss_pred cCcHHHHHHHHHHHHhcCC-ceEEEEEccCCCCCC-----Cccc-CCeEEEEeCCC
Confidence 3444333 35788888898 999999866411111 1111 27888888753
No 229
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=50.41 E-value=1.2e+02 Score=30.62 Aligned_cols=35 Identities=23% Similarity=0.342 Sum_probs=29.0
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEe
Q 046326 99 SLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFV 137 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~ 137 (476)
.+.+++++. +||++|.+.. ...+|+++|||++.++
T Consensus 363 e~~~~l~~~-~~dliiG~s~---~~~~a~~~~ip~~~~~ 397 (429)
T cd03466 363 DIESYAKEL-KIDVLIGNSY---GRRIAEKLGIPLIRIG 397 (429)
T ss_pred HHHHHHHhc-CCCEEEECch---hHHHHHHcCCCEEEec
Confidence 677888888 9999999864 5678999999998654
No 230
>TIGR01862 N2-ase-Ialpha nitrogenase component I, alpha chain. This model represents the alpha chain of all three varieties (Mo-Fe, V-Fe, and Fe-Fe) of component I of nitrogenase.
Probab=50.24 E-value=1.1e+02 Score=31.25 Aligned_cols=34 Identities=15% Similarity=0.417 Sum_probs=26.7
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEE
Q 046326 99 SLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSF 136 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~ 136 (476)
.+.+.+++. +||++|... ....+|+++|||++.+
T Consensus 378 e~~~~i~~~-~pdllig~s---~~~~~A~~lgip~~~~ 411 (443)
T TIGR01862 378 EFEEILEKL-KPDIIFSGI---KEKFVAQKLGVPYRQM 411 (443)
T ss_pred HHHHHHHhc-CCCEEEEcC---cchhhhhhcCCCeEec
Confidence 455667777 999999876 3566899999999864
No 231
>PRK10490 sensor protein KdpD; Provisional
Probab=50.08 E-value=78 Score=35.56 Aligned_cols=40 Identities=23% Similarity=0.234 Sum_probs=36.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 6 LQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 6 ~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
-+++|.+=..|+-|-.+-||.-|++|+++| ++|.+-..++
T Consensus 23 g~l~i~~g~~~gvgkt~~ml~~a~~~~~~g-~dvv~g~~e~ 62 (895)
T PRK10490 23 GKLKIFFGACAGVGKTYAMLQEAQRLRAQG-LDVLVGVVET 62 (895)
T ss_pred CcEEEEeecCCCCCHHHHHHHHHHHHHhCC-CcEEEEEeeC
Confidence 468999999999999999999999999999 9998877765
No 232
>PRK09165 replicative DNA helicase; Provisional
Probab=49.80 E-value=85 Score=32.53 Aligned_cols=36 Identities=14% Similarity=0.161 Sum_probs=29.4
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhc---------------CCcEEEEEEccC
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVLN---------------HGVHVSFLVITT 46 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~r---------------G~h~V~~~~~~~ 46 (476)
|++..-|+.|-..=++.+|...+.+ | ..|.|++.+-
T Consensus 220 ivIaarpg~GKT~~al~ia~~~a~~~~~~~~~~~~~~~~~g-~~vl~fSlEM 270 (497)
T PRK09165 220 IILAGRPSMGKTALATNIAFNAAKAYRREAQPDGSKKAVNG-GVVGFFSLEM 270 (497)
T ss_pred EEEEeCCCCChHHHHHHHHHHHHHhhcccccccccccccCC-CeEEEEeCcC
Confidence 5667778999999999999888753 6 7899988774
No 233
>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an
Probab=49.48 E-value=1.4e+02 Score=26.45 Aligned_cols=33 Identities=30% Similarity=0.424 Sum_probs=23.9
Q ss_pred CCCEEEE-CCCc-chHHHHHHHcCCCeEEEecccH
Q 046326 109 NPNALVI-DLFC-TQAFEICSQLSIPTYSFVTTSV 141 (476)
Q Consensus 109 ~pDlVI~-D~~~-~~~~~~A~~lgIP~v~~~~~~~ 141 (476)
.||+||. |... ..++.=|.++|||.+.+.-+..
T Consensus 127 ~Pdlviv~~~~~~~~ai~Ea~~l~IP~I~i~Dtn~ 161 (193)
T cd01425 127 LPDLVIVLDPRKEHQAIREASKLGIPVIAIVDTNC 161 (193)
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCC
Confidence 8999884 5432 2445578999999999876553
No 234
>PRK14477 bifunctional nitrogenase molybdenum-cofactor biosynthesis protein NifE/NifN; Provisional
Probab=49.45 E-value=1.4e+02 Score=33.77 Aligned_cols=36 Identities=17% Similarity=0.115 Sum_probs=28.1
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEec
Q 046326 99 SLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFVT 138 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~ 138 (476)
.+.+++++. +||++|.+.. ...+|+++|||++-...
T Consensus 380 el~~~i~~~-~pDLlig~~~---~~~~a~k~giP~~~~~~ 415 (917)
T PRK14477 380 GLLRVMREK-MPDLIVAGGK---TKFLALKTRTPFLDINH 415 (917)
T ss_pred HHHHHHHhc-CCCEEEecCc---hhhHHHHcCCCeEEccC
Confidence 566777777 9999998653 45589999999996553
No 235
>TIGR00639 PurN phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent. In phylogenetic analyses, the member from Saccharomyces cerevisiae shows a long branch length but membership in the family, while the formyltetrahydrofolate deformylases form a closely related outgroup.
Probab=48.81 E-value=1.9e+02 Score=25.53 Aligned_cols=85 Identities=14% Similarity=0.084 Sum_probs=46.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCc--EEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchH
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNHGV--HVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVV 85 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG~h--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (476)
+||+++..+...-+ .+|.+.+.+.+ + +|.++.+..+.. ......... ++.++.++... + ..
T Consensus 1 ~riail~sg~gs~~---~~ll~~~~~~~-l~~~I~~vi~~~~~~--~~~~~A~~~--gip~~~~~~~~---~-~~----- 63 (190)
T TIGR00639 1 KRIVVLISGNGSNL---QAIIDACKEGK-IPASVVLVISNKPDA--YGLERAAQA--GIPTFVLSLKD---F-PS----- 63 (190)
T ss_pred CeEEEEEcCCChhH---HHHHHHHHcCC-CCceEEEEEECCccc--hHHHHHHHc--CCCEEEECccc---c-Cc-----
Confidence 57888887655444 45666677665 4 666655553221 122223333 67776654211 1 10
Q ss_pred HHHHHHHHHhhcHHHHHHHHhcCCCCEEEECC
Q 046326 86 TRLHAIVEESLSKSLKSVLTELCNPNALVIDL 117 (476)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~ 117 (476)
.....+ .+.+++++. ++|++|+-.
T Consensus 64 ------~~~~~~-~~~~~l~~~-~~D~iv~~~ 87 (190)
T TIGR00639 64 ------REAFDQ-AIIEELRAH-EVDLVVLAG 87 (190)
T ss_pred ------hhhhhH-HHHHHHHhc-CCCEEEEeC
Confidence 001122 567778888 999998643
No 236
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=48.38 E-value=46 Score=36.72 Aligned_cols=99 Identities=10% Similarity=0.106 Sum_probs=58.1
Q ss_pred HhhccCCccceec--ccCch-HHHHHHhcCCc---Eeeccccchhhhhhhhhcceeee-eEEeccccCCCCCcCHHHHHH
Q 046326 356 HILRHPSTGGFLS--HCGWN-STLESICHGVP---MIAWPLYAEQRMNAAMLTAEETG-VAVKPETEPGKKVIGREEIER 428 (476)
Q Consensus 356 ~iL~~~~~~~~I~--HgG~~-s~~eal~~GvP---~l~~P~~~DQ~~na~~~~~~~~G-~G~~l~~~~~~~~~~~~~l~~ 428 (476)
.++..+++ ++++ .-|.| +..|++++|+| ++++.-++ -.+ +.+| -|+.++. .+.+++++
T Consensus 371 aly~~ADv-fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~---G~~-----~~l~~~allVnP------~D~~~lA~ 435 (797)
T PLN03063 371 ALYAITDV-MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFA---GAG-----QSLGAGALLVNP------WNITEVSS 435 (797)
T ss_pred HHHHhCCE-EEeCccccccCcchhhHheeecCCCCCEEeeCCc---Cch-----hhhcCCeEEECC------CCHHHHHH
Confidence 56777786 3333 35776 77899999999 44443211 111 2233 3666665 68999999
Q ss_pred HHHHHhcCChhHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHhh
Q 046326 429 VVRLVMEGEEGKVMRRRVQELKESASRELGDGGSSSDSLASFIKKCK 475 (476)
Q Consensus 429 ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 475 (476)
+|.++|+.+.. ..+++.+++.+.++ .-+...-.+.|++.|.
T Consensus 436 AI~~aL~m~~~-er~~r~~~~~~~v~-----~~~~~~Wa~~fl~~l~ 476 (797)
T PLN03063 436 AIKEALNMSDE-ERETRHRHNFQYVK-----THSAQKWADDFMSELN 476 (797)
T ss_pred HHHHHHhCCHH-HHHHHHHHHHHhhh-----hCCHHHHHHHHHHHHH
Confidence 99999984321 13334444444433 3345555666666553
No 237
>TIGR00460 fmt methionyl-tRNA formyltransferase. The top-scoring characterized proteins other than methionyl-tRNA formyltransferase (fmt) itself are formyltetrahydrofolate dehydrogenases. The mitochondrial methionyl-tRNA formyltransferases are so divergent that, in a multiple alignment of bacterial fmt, mitochondrial fmt, and formyltetrahydrofolate dehydrogenases, the mitochondrial fmt appears the most different. However, because both bacterial and mitochondrial fmt are included in the seed alignment, all credible fmt sequences score higher than any non-fmt sequence. This enzyme modifies Met on initiator tRNA to f-Met.
Probab=48.26 E-value=1.6e+02 Score=28.32 Aligned_cols=33 Identities=15% Similarity=0.193 Sum_probs=23.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
|||+|+-.+.. .+...++|.++| |+|..+.+.+
T Consensus 1 mkIvf~Gs~~~-----a~~~L~~L~~~~-~~i~~Vvt~p 33 (313)
T TIGR00460 1 LRIVFFGTPTF-----SLPVLEELREDN-FEVVGVVTQP 33 (313)
T ss_pred CEEEEECCCHH-----HHHHHHHHHhCC-CcEEEEEcCC
Confidence 57888865543 366778888898 9988776543
No 238
>PRK11823 DNA repair protein RadA; Provisional
Probab=48.14 E-value=1.2e+02 Score=30.89 Aligned_cols=103 Identities=22% Similarity=0.289 Sum_probs=62.9
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHH
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLH 89 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (476)
+++.--|+.|--.=++.++..++++| +.|.+++.+.. ...+....+++ ++....+- -. .+ .+
T Consensus 83 ~lI~G~pG~GKTtL~lq~a~~~a~~g-~~vlYvs~Ees--~~qi~~ra~rl--g~~~~~l~-----~~-~e-~~------ 144 (446)
T PRK11823 83 VLIGGDPGIGKSTLLLQVAARLAAAG-GKVLYVSGEES--ASQIKLRAERL--GLPSDNLY-----LL-AE-TN------ 144 (446)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcC-CeEEEEEcccc--HHHHHHHHHHc--CCChhcEE-----Ee-CC-CC------
Confidence 45566679999999999999999888 99999987742 22233323333 22211110 00 00 01
Q ss_pred HHHHHhhcHHHHHHHHhcCCCCEEEECCCcch---------------------HHHHHHHcCCCeEEEec
Q 046326 90 AIVEESLSKSLKSVLTELCNPNALVIDLFCTQ---------------------AFEICSQLSIPTYSFVT 138 (476)
Q Consensus 90 ~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~---------------------~~~~A~~lgIP~v~~~~ 138 (476)
.. .+.+.+++. ++++||.|..... -..+|+.+|++++.+..
T Consensus 145 ------l~-~i~~~i~~~-~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~~ak~~~itvilv~h 206 (446)
T PRK11823 145 ------LE-AILATIEEE-KPDLVVIDSIQTMYSPELESAPGSVSQVRECAAELMRLAKQRGIAVFLVGH 206 (446)
T ss_pred ------HH-HHHHHHHhh-CCCEEEEechhhhccccccCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEee
Confidence 12 344455556 9999999975421 12267889999998753
No 239
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=48.11 E-value=19 Score=31.71 Aligned_cols=38 Identities=13% Similarity=0.112 Sum_probs=26.0
Q ss_pred CCEEEEEcCCCccCHHH------------HHHHHHHHHhcCCcEEEEEEcc
Q 046326 7 QPHVAVLPSPGLGHLIP------------LLEFAKRLVLNHGVHVSFLVIT 45 (476)
Q Consensus 7 ~~rIll~~~p~~GHi~P------------~l~La~~L~~rG~h~V~~~~~~ 45 (476)
.+||++...|++=.+.| -..||+++..+| |+|+++...
T Consensus 3 gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~G-a~V~li~g~ 52 (185)
T PF04127_consen 3 GKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRG-AEVTLIHGP 52 (185)
T ss_dssp T-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT--EEEEEE-T
T ss_pred CCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCC-CEEEEEecC
Confidence 45666666666555554 368999999999 999999876
No 240
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=48.08 E-value=58 Score=28.95 Aligned_cols=60 Identities=13% Similarity=-0.130 Sum_probs=45.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcC
Q 046326 6 LQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLP 70 (476)
Q Consensus 6 ~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (476)
.+.+|++.+.++-.|-....-++..|+.+| ++|+++....|.. .+.+.+... +.+++.+.
T Consensus 83 ~~~~vv~~t~~gd~H~lG~~~v~~~l~~~G-~~vi~LG~~vp~e--~~v~~~~~~--~pd~v~lS 142 (197)
T TIGR02370 83 VLGKVVCGVAEGDVHDIGKNIVVTMLRANG-FDVIDLGRDVPID--TVVEKVKKE--KPLMLTGS 142 (197)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCC-cEEEECCCCCCHH--HHHHHHHHc--CCCEEEEc
Confidence 357999999999999999999999999999 9999998765322 233333333 45565554
No 241
>PRK08760 replicative DNA helicase; Provisional
Probab=47.98 E-value=1.1e+02 Score=31.62 Aligned_cols=36 Identities=14% Similarity=0.274 Sum_probs=30.3
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHh-cCCcEEEEEEccC
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVL-NHGVHVSFLVITT 46 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~-rG~h~V~~~~~~~ 46 (476)
|++..-|+.|-..=++.+|...+. .| +.|.|++.+-
T Consensus 232 ivIaarPg~GKTafal~iA~~~a~~~g-~~V~~fSlEM 268 (476)
T PRK08760 232 IILAARPAMGKTTFALNIAEYAAIKSK-KGVAVFSMEM 268 (476)
T ss_pred EEEEeCCCCChhHHHHHHHHHHHHhcC-CceEEEeccC
Confidence 566777899999999999998875 47 8899998775
No 242
>TIGR02655 circ_KaiC circadian clock protein KaiC. Members of this family are the circadian clock protein KaiC, part of the kaiABC operon that controls circadian rhythm. It may be universal in Cyanobacteria. Each member has two copies of the KaiC domain (Pfam model pfam06745), which is also found in other proteins. KaiC performs autophosphorylation and acts as its own transcriptional repressor.
Probab=47.82 E-value=1.8e+02 Score=29.98 Aligned_cols=115 Identities=17% Similarity=0.245 Sum_probs=68.5
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCC-C---CCCCCCCCchH
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVD-V---SAVTSDDMPVV 85 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~ 85 (476)
+++.-.|+.|--.=.+.++.+.+++| ..|.+++.+. ....+....+++ |+++..+-... . +.. +.....
T Consensus 266 ~li~G~~G~GKt~l~~~f~~~~~~~g-e~~~y~s~eE--s~~~i~~~~~~l--g~~~~~~~~~g~l~~~~~~-p~~~~~- 338 (484)
T TIGR02655 266 ILATGATGTGKTLLVSKFLENACANK-ERAILFAYEE--SRAQLLRNAYSW--GIDFEEMEQQGLLKIICAY-PESAGL- 338 (484)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCC-CeEEEEEeeC--CHHHHHHHHHHc--CCChHHHhhCCcEEEEEcc-cccCCh-
Confidence 56666689999999999999999999 9999998874 333344444444 33322111000 0 000 111011
Q ss_pred HHHHHHHHHhhcHHHHHHHHhcCCCCEEEECCCcchH---------------HHHHHHcCCCeEEEeccc
Q 046326 86 TRLHAIVEESLSKSLKSVLTELCNPNALVIDLFCTQA---------------FEICSQLSIPTYSFVTTS 140 (476)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~~---------------~~~A~~lgIP~v~~~~~~ 140 (476)
..... .+.+.+++. ++|+||.|...... ...++..||..+......
T Consensus 339 -------~~~~~-~i~~~i~~~-~~~~vvIDsi~~~~~~~~~~~~r~~~~~l~~~lk~~~it~~~t~~~~ 399 (484)
T TIGR02655 339 -------EDHLQ-IIKSEIADF-KPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGFFTNTSD 399 (484)
T ss_pred -------HHHHH-HHHHHHHHc-CCCEEEEcCHHHHHHhcCHHHHHHHHHHHHHHHhhCCCeEEEeeccc
Confidence 12333 567777777 99999999876431 124567788877765433
No 243
>TIGR03600 phage_DnaB phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model.
Probab=47.76 E-value=1.8e+02 Score=29.27 Aligned_cols=36 Identities=17% Similarity=0.300 Sum_probs=30.9
Q ss_pred EEEEcCCCccCHHHHHHHHHHHH-hcCCcEEEEEEccC
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLV-LNHGVHVSFLVITT 46 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~-~rG~h~V~~~~~~~ 46 (476)
+++...|+.|-..=.+.+|..++ +.| +.|.|++.+-
T Consensus 197 iviag~pg~GKT~~al~ia~~~a~~~g-~~v~~fSlEm 233 (421)
T TIGR03600 197 IVIGARPSMGKTTLALNIAENVALREG-KPVLFFSLEM 233 (421)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhCC-CcEEEEECCC
Confidence 56677789999999999998887 678 9999998775
No 244
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=47.44 E-value=46 Score=29.58 Aligned_cols=58 Identities=19% Similarity=0.281 Sum_probs=41.1
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcch--hhhhhhhhcCCCCceEEEcC
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEAS--AAKNNLLRSLPHGLDVVDLP 70 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 70 (476)
|+|+-..+-|-..-...||..++.+| ..|.+++.++-+.. ..++.+.+.+ ++.+....
T Consensus 4 i~lvGptGvGKTTt~aKLAa~~~~~~-~~v~lis~D~~R~ga~eQL~~~a~~l--~vp~~~~~ 63 (196)
T PF00448_consen 4 IALVGPTGVGKTTTIAKLAARLKLKG-KKVALISADTYRIGAVEQLKTYAEIL--GVPFYVAR 63 (196)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTT---EEEEEESTSSTHHHHHHHHHHHHH--TEEEEESS
T ss_pred EEEECCCCCchHhHHHHHHHHHhhcc-ccceeecCCCCCccHHHHHHHHHHHh--ccccchhh
Confidence 55666668899999999999999998 99999998873322 3445555544 67776653
No 245
>TIGR03878 thermo_KaiC_2 KaiC domain protein, AF_0795 family. This KaiC domain-containing protein family occurs sporadically across a broad taxonomic range (Euryarchaeota, Aquificae, Dictyoglomi, Epsilonproteobacteria, and Firmicutes), but exclusively in thermophiles.
Probab=46.76 E-value=1.3e+02 Score=27.98 Aligned_cols=38 Identities=13% Similarity=0.183 Sum_probs=31.4
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCc
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNE 48 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~ 48 (476)
+++.-.|+.|-..=.+.++...+++| ..|.+++.+.+.
T Consensus 39 ~lI~G~pGtGKT~l~~qf~~~~a~~G-e~vlyis~Ee~~ 76 (259)
T TIGR03878 39 INITGVSDTGKSLMVEQFAVTQASRG-NPVLFVTVESPA 76 (259)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHhCC-CcEEEEEecCCc
Confidence 45566679999999999999988888 999999987533
No 246
>PRK13934 stationary phase survival protein SurE; Provisional
Probab=46.72 E-value=1.7e+02 Score=27.38 Aligned_cols=23 Identities=13% Similarity=-0.102 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 22 IPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 22 ~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
.=+.+|++.|++.| +|+++.|..
T Consensus 14 pGi~aL~~al~~~g--~V~VvAP~~ 36 (266)
T PRK13934 14 PGLRLLYEFVSPLG--EVDVVAPET 36 (266)
T ss_pred HHHHHHHHHHHhCC--cEEEEccCC
Confidence 34678999998876 588888774
No 247
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=46.56 E-value=40 Score=28.79 Aligned_cols=33 Identities=12% Similarity=-0.031 Sum_probs=26.1
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhCCCceEE
Q 046326 271 VLFAVPGSGGTLTAEQVTEMAWGLEQSKQRFIW 303 (476)
Q Consensus 271 vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~i~ 303 (476)
.+|+++||......+.++..+.+|.+.+.--|+
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~~~v~ 35 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALADIRVV 35 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCCceEE
Confidence 699999999877778888888888887753333
No 248
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=45.86 E-value=36 Score=28.46 Aligned_cols=41 Identities=22% Similarity=0.037 Sum_probs=36.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 5 SLQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 5 ~~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
+.+.||++.+.+.-||=.-.--+++.|++.| .+|.....-.
T Consensus 10 g~rprvlvak~GlDgHd~gakvia~~l~d~G-feVi~~g~~~ 50 (143)
T COG2185 10 GARPRVLVAKLGLDGHDRGAKVIARALADAG-FEVINLGLFQ 50 (143)
T ss_pred CCCceEEEeccCccccccchHHHHHHHHhCC-ceEEecCCcC
Confidence 4689999999999999999999999999999 8888876443
No 249
>PRK13011 formyltetrahydrofolate deformylase; Reviewed
Probab=45.61 E-value=2.7e+02 Score=26.49 Aligned_cols=105 Identities=14% Similarity=0.159 Sum_probs=56.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhcC-CcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCc
Q 046326 5 SLQPHVAVLPSPGLGHLIPLLEFAKRLVLNH-GVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMP 83 (476)
Q Consensus 5 ~~~~rIll~~~p~~GHi~P~l~La~~L~~rG-~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (476)
.+++||+++..+....+. +|.++..... +++|.++....+ + .....+.. ++.++.++... ..
T Consensus 87 ~~~~ri~vl~Sg~g~nl~---al~~~~~~~~~~~~i~~visn~~-~---~~~lA~~~--gIp~~~~~~~~-~~------- 149 (286)
T PRK13011 87 AARPKVLIMVSKFDHCLN---DLLYRWRIGELPMDIVGVVSNHP-D---LEPLAAWH--GIPFHHFPITP-DT------- 149 (286)
T ss_pred ccCceEEEEEcCCcccHH---HHHHHHHcCCCCcEEEEEEECCc-c---HHHHHHHh--CCCEEEeCCCc-Cc-------
Confidence 567899999998644444 4444444431 288888876432 2 22223333 78877775311 00
Q ss_pred hHHHHHHHHHHhhcHHHHHHHHhcCCCCEEEECC-CcchHHHHHHHcCCCeEEE
Q 046326 84 VVTRLHAIVEESLSKSLKSVLTELCNPNALVIDL-FCTQAFEICSQLSIPTYSF 136 (476)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~-~~~~~~~~A~~lgIP~v~~ 136 (476)
. ..... .+.++++++ ++|++|.-. ...-...+-+.+.-..+-+
T Consensus 150 ~--------~~~~~-~~~~~l~~~-~~Dlivlagy~~il~~~~l~~~~~~iiNi 193 (286)
T PRK13011 150 K--------PQQEA-QVLDVVEES-GAELVVLARYMQVLSPELCRKLAGRAINI 193 (286)
T ss_pred h--------hhhHH-HHHHHHHHh-CcCEEEEeChhhhCCHHHHhhccCCeEEe
Confidence 0 00112 466677788 999999643 3333333444444344443
No 250
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=45.17 E-value=36 Score=27.54 Aligned_cols=39 Identities=15% Similarity=0.010 Sum_probs=35.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCc
Q 046326 9 HVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNE 48 (476)
Q Consensus 9 rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~ 48 (476)
||++.+.++-.|-.-..-++..|+.+| ++|.+.....|.
T Consensus 1 ~vv~~~~~gd~H~lG~~~~~~~l~~~G-~~vi~lG~~vp~ 39 (122)
T cd02071 1 RILVAKPGLDGHDRGAKVIARALRDAG-FEVIYTGLRQTP 39 (122)
T ss_pred CEEEEecCCChhHHHHHHHHHHHHHCC-CEEEECCCCCCH
Confidence 689999999999999999999999999 999999876533
No 251
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=44.79 E-value=1.7e+02 Score=28.34 Aligned_cols=89 Identities=15% Similarity=0.150 Sum_probs=57.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcch--hhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCch
Q 046326 7 QPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEAS--AAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPV 84 (476)
Q Consensus 7 ~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (476)
+--|+|+-.-+.|-..-.=.||+.|.+.| +.|.++..++-+.. ..+....++. |..++.-. .+.+.
T Consensus 139 p~Vil~vGVNG~GKTTTIaKLA~~l~~~g-~~VllaA~DTFRAaAiEQL~~w~er~--gv~vI~~~---------~G~Dp 206 (340)
T COG0552 139 PFVILFVGVNGVGKTTTIAKLAKYLKQQG-KSVLLAAGDTFRAAAIEQLEVWGERL--GVPVISGK---------EGADP 206 (340)
T ss_pred cEEEEEEecCCCchHhHHHHHHHHHHHCC-CeEEEEecchHHHHHHHHHHHHHHHh--CCeEEccC---------CCCCc
Confidence 33467777889999999999999999999 99999999882222 2233334444 66665542 12233
Q ss_pred HHHHHHHHHHhhcHHHHHHHHhcCCCCEEEECC
Q 046326 85 VTRLHAIVEESLSKSLKSVLTELCNPNALVIDL 117 (476)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~ 117 (476)
... .+. .+.....+ ++|+||.|.
T Consensus 207 AaV-------afD-Ai~~Akar--~~DvvliDT 229 (340)
T COG0552 207 AAV-------AFD-AIQAAKAR--GIDVVLIDT 229 (340)
T ss_pred HHH-------HHH-HHHHHHHc--CCCEEEEeC
Confidence 221 112 33333333 999999996
No 252
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=44.39 E-value=2.5e+02 Score=25.51 Aligned_cols=36 Identities=17% Similarity=0.314 Sum_probs=30.4
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhc-CCcEEEEEEccC
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVLN-HGVHVSFLVITT 46 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~r-G~h~V~~~~~~~ 46 (476)
+++...|+.|=..=.+.++..++.+ | +.|.+++.+.
T Consensus 16 ~lI~G~~G~GKT~~~~~~~~~~~~~~g-~~vly~s~E~ 52 (242)
T cd00984 16 IIIAARPSMGKTAFALNIAENIAKKQG-KPVLFFSLEM 52 (242)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhCC-CceEEEeCCC
Confidence 4556667889999999999999887 8 9999999885
No 253
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=43.85 E-value=2.5e+02 Score=25.97 Aligned_cols=34 Identities=29% Similarity=0.379 Sum_probs=23.9
Q ss_pred CCCEEE-ECCCcc-hHHHHHHHcCCCeEEEecccHH
Q 046326 109 NPNALV-IDLFCT-QAFEICSQLSIPTYSFVTTSVH 142 (476)
Q Consensus 109 ~pDlVI-~D~~~~-~~~~~A~~lgIP~v~~~~~~~~ 142 (476)
-||+++ .|+..- -|+.=|.++|||+|.++=+.+.
T Consensus 156 ~Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDTn~d 191 (252)
T COG0052 156 LPDVLFVIDPRKEKIAVKEANKLGIPVVALVDTNCD 191 (252)
T ss_pred CCCEEEEeCCcHhHHHHHHHHHcCCCEEEEecCCCC
Confidence 499988 565332 2444689999999998765553
No 254
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=43.82 E-value=36 Score=34.79 Aligned_cols=60 Identities=15% Similarity=0.193 Sum_probs=39.6
Q ss_pred cccCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCCh
Q 046326 368 SHCGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGEE 438 (476)
Q Consensus 368 ~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~ 438 (476)
-|=|. ++.||+++|.|++..= +.--+.-+ +..--|.-++. +.-....+++++.++..|++
T Consensus 376 E~FGi-v~IEAMa~glPvvAt~----~GGP~EiV--~~~~tG~l~dp----~~e~~~~~a~~~~kl~~~p~ 435 (495)
T KOG0853|consen 376 EHFGI-VPIEAMACGLPVVATN----NGGPAEIV--VHGVTGLLIDP----GQEAVAELADALLKLRRDPE 435 (495)
T ss_pred CCccc-eeHHHHhcCCCEEEec----CCCceEEE--EcCCcceeeCC----chHHHHHHHHHHHHHhcCHH
Confidence 45453 7899999999999872 22222222 33333666655 33444579999999999998
No 255
>PHA02542 41 41 helicase; Provisional
Probab=43.06 E-value=1.4e+02 Score=30.69 Aligned_cols=36 Identities=14% Similarity=0.253 Sum_probs=31.4
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
|++..-|+.|-..-.+.+|...++.| +.|.|++.+-
T Consensus 193 iiIaarPgmGKTtfalniA~~~a~~g-~~Vl~fSLEM 228 (473)
T PHA02542 193 NVLLAGVNVGKSLGLCSLAADYLQQG-YNVLYISMEM 228 (473)
T ss_pred EEEEcCCCccHHHHHHHHHHHHHhcC-CcEEEEeccC
Confidence 56667789999999999999998888 9999998774
No 256
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=42.72 E-value=41 Score=21.82 Aligned_cols=25 Identities=16% Similarity=0.468 Sum_probs=18.4
Q ss_pred CHHHHHHHHHHHhcC-ChhHHHHHHHHHH
Q 046326 422 GREEIERVVRLVMEG-EEGKVMRRRVQEL 449 (476)
Q Consensus 422 ~~~~l~~ai~~~l~~-~~~~~~~~~a~~l 449 (476)
++++|..||..+.++ -+ +++.|+++
T Consensus 1 tee~l~~Ai~~v~~g~~S---~r~AA~~y 26 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGKMS---IRKAAKKY 26 (45)
T ss_dssp -HHHHHHHHHHHHTTSS----HHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCC---HHHHHHHH
Confidence 578999999999977 44 77777664
No 257
>cd01452 VWA_26S_proteasome_subunit 26S proteasome plays a major role in eukaryotic protein breakdown, especially for ubiquitin-tagged proteins. It is an ATP-dependent protease responsible for the bulk of non-lysosomal proteolysis in eukaryotes, often using covalent modification of proteins by ubiquitylation. It consists of a 20S proteolytic core particle (CP) and a 19S regulatory particle (RP). The CP is an ATP independent peptidase consisting of hydrolyzing activities. One or both ends of CP carry the RP that confers both ubiquitin and ATP dependence to the 26S proteosome. The RP's proposed functions include recognition of substrates and translocation of these to CP for proteolysis. The RP can dissociate into a stable lid and base subcomplexes. The base is composed of three non-ATPase subunits (Rpn 1, 2 and 10). A single residue in the vWA domain of Rpn10 has been implicated to be responsible for stabilizing the lid-base association.
Probab=42.54 E-value=1.8e+02 Score=25.71 Aligned_cols=63 Identities=25% Similarity=0.394 Sum_probs=45.9
Q ss_pred CE-EEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC-CcchhhhhhhhhcCC--CCceEEEcCC
Q 046326 8 PH-VAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT-NEASAAKNNLLRSLP--HGLDVVDLPP 71 (476)
Q Consensus 8 ~r-Ill~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~ 71 (476)
.| |+|+..+..-|-.=+..+++.|++.| .+|.++...+ ..|...+..+.+... ++-+|+.++.
T Consensus 108 ~rivi~v~S~~~~d~~~i~~~~~~lkk~~-I~v~vI~~G~~~~~~~~l~~~~~~~~~~~~s~~~~~~~ 174 (187)
T cd01452 108 QRIVAFVGSPIEEDEKDLVKLAKRLKKNN-VSVDIINFGEIDDNTEKLTAFIDAVNGKDGSHLVSVPP 174 (187)
T ss_pred ceEEEEEecCCcCCHHHHHHHHHHHHHcC-CeEEEEEeCCCCCCHHHHHHHHHHhcCCCCceEEEeCC
Confidence 45 77778887777666779999999998 8888887664 345566777766653 2577888874
No 258
>PF02585 PIG-L: GlcNAc-PI de-N-acetylase; InterPro: IPR003737 A number of the members of this family have been characterised as a probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, (3.5.1.89 from EC) that catalyses the second step in glycosylphosphatidylinositol (GPI) biosynthesis [, ]. The family also includes a number of thiol biosynthesis proteins. ; PDB: 2XAD_C 2X9L_A 3DFK_A 3DFM_A 3DFF_A 2IXD_A 1UAN_A 1Q74_B 1Q7T_B 3DFI_A.
Probab=42.35 E-value=1.4e+02 Score=24.06 Aligned_cols=17 Identities=18% Similarity=0.530 Sum_probs=13.5
Q ss_pred HHHHHHHhcCCCCEEEEC
Q 046326 99 SLKSVLTELCNPNALVID 116 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D 116 (476)
.+.++++++ +||+|++-
T Consensus 91 ~l~~~i~~~-~p~~V~t~ 107 (128)
T PF02585_consen 91 DLEDLIREF-RPDVVFTP 107 (128)
T ss_dssp HHHHHHHHH--ESEEEEE
T ss_pred HHHHHHHHc-CCCEEEEC
Confidence 788888888 99999964
No 259
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=42.31 E-value=1.3e+02 Score=27.96 Aligned_cols=42 Identities=17% Similarity=0.321 Sum_probs=31.8
Q ss_pred CeEeccccchHHhhccCCccceecccCchHHHHHHhcCCcEeecc
Q 046326 345 GMVVPSWAPQVHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWP 389 (476)
Q Consensus 345 ~~~~~~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P 389 (476)
.+.+..-.+-..++.+++. +||-.+ .+-.||+.+|+|++++.
T Consensus 184 ~~~~~~~~~~~~Ll~~s~~--VvtinS-tvGlEAll~gkpVi~~G 225 (269)
T PF05159_consen 184 VVIIDDDVNLYELLEQSDA--VVTINS-TVGLEALLHGKPVIVFG 225 (269)
T ss_pred eEEECCCCCHHHHHHhCCE--EEEECC-HHHHHHHHcCCceEEec
Confidence 3445556677789999994 666644 57789999999999973
No 260
>TIGR01286 nifK nitrogenase molybdenum-iron protein beta chain. This model represents the majority of known sequences of the nitrogenase molybdenum-iron protein beta subunit. A distinct clade in a phylogenetic tree contains molybdenum-iron, vanadium-iron, and iron-iron forms of nitrogenase beta subunit and is excluded from this model. Nitrogenase, also called dinitrogenase, is responsible for nitrogen fixation. Note: the trusted cutoff score has recently been lowered to include an additional family in which the beta subunit is shorter by about 50 amino acids at the N-terminus. In species with the shorter form of the beta subunit, the alpha subunit has a novel insert of similar length.
Probab=42.03 E-value=2.1e+02 Score=29.89 Aligned_cols=35 Identities=14% Similarity=0.114 Sum_probs=28.6
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEe
Q 046326 99 SLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFV 137 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~ 137 (476)
.+++++.+. +||++|.+.. +..+|+++|||.+-+.
T Consensus 428 ~l~~~l~~~-~~DlliG~s~---~k~~a~~~giPlir~g 462 (515)
T TIGR01286 428 HLRSLVFTE-PVDFLIGNSY---GKYIQRDTLVPLIRIG 462 (515)
T ss_pred HHHHHHhhc-CCCEEEECch---HHHHHHHcCCCEEEec
Confidence 677778777 9999998763 5678999999998654
No 261
>TIGR00347 bioD dethiobiotin synthase. Dethiobiotin synthase is involved in biotin biosynthesis and catalyses the reaction (CO2 + 7,8-diaminononanoate + ATP = dethiobiotin + phosphate + ADP). The enzyme binds ATP (see motif in first 12 residues of the SEED alignment) and requires magnesium as a co-factor.
Probab=41.97 E-value=1.8e+02 Score=24.54 Aligned_cols=28 Identities=18% Similarity=0.323 Sum_probs=24.1
Q ss_pred cCCCccCHHHHHHHHHHHHhcCCcEEEEE
Q 046326 14 PSPGLGHLIPLLEFAKRLVLNHGVHVSFL 42 (476)
Q Consensus 14 ~~p~~GHi~P~l~La~~L~~rG~h~V~~~ 42 (476)
+.+..|-..-.+.|++.|+++| .+|.+.
T Consensus 5 t~~~~GKT~va~~L~~~l~~~g-~~V~~~ 32 (166)
T TIGR00347 5 TDTGVGKTVASSALAAKLKKAG-YSVGYY 32 (166)
T ss_pred CCCCccHHHHHHHHHHHHHHCC-CcEEEE
Confidence 4467788899999999999999 888885
No 262
>PRK08006 replicative DNA helicase; Provisional
Probab=41.82 E-value=1.8e+02 Score=29.88 Aligned_cols=57 Identities=14% Similarity=0.259 Sum_probs=38.5
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHh-cCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEc
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVL-NHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDL 69 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~-rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (476)
|++..-|+.|-..-.+.+|...+. .| +.|.|++.+- .......+.+.... ++....+
T Consensus 227 iiIaarPgmGKTafalnia~~~a~~~g-~~V~~fSlEM-~~~ql~~Rlla~~~-~v~~~~i 284 (471)
T PRK08006 227 IIVAARPSMGKTTFAMNLCENAAMLQD-KPVLIFSLEM-PGEQIMMRMLASLS-RVDQTRI 284 (471)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhcC-CeEEEEeccC-CHHHHHHHHHHHhc-CCCHHHh
Confidence 566777999999999999999874 57 8999998774 22333444443332 4444444
No 263
>PRK13789 phosphoribosylamine--glycine ligase; Provisional
Probab=41.69 E-value=1.1e+02 Score=30.93 Aligned_cols=32 Identities=19% Similarity=0.147 Sum_probs=25.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEc
Q 046326 7 QPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVI 44 (476)
Q Consensus 7 ~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~ 44 (476)
.|||+++-.+++=| +|++.|++.+ +...+++.
T Consensus 4 ~~kvLviG~g~reh-----al~~~~~~~~-~~~~~~~~ 35 (426)
T PRK13789 4 KLKVLLIGSGGRES-----AIAFALRKSN-LLSELKVF 35 (426)
T ss_pred CcEEEEECCCHHHH-----HHHHHHHhCC-CCCEEEEE
Confidence 58999999999877 7999999987 55454443
No 264
>PRK10867 signal recognition particle protein; Provisional
Probab=41.47 E-value=1.4e+02 Score=30.29 Aligned_cols=38 Identities=16% Similarity=0.152 Sum_probs=32.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhc-CCcEEEEEEccC
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLN-HGVHVSFLVITT 46 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~r-G~h~V~~~~~~~ 46 (476)
.-|+++-.++.|-..-...||..|+++ | +.|.++..++
T Consensus 101 ~vI~~vG~~GsGKTTtaakLA~~l~~~~G-~kV~lV~~D~ 139 (433)
T PRK10867 101 TVIMMVGLQGAGKTTTAGKLAKYLKKKKK-KKVLLVAADV 139 (433)
T ss_pred EEEEEECCCCCcHHHHHHHHHHHHHHhcC-CcEEEEEccc
Confidence 345666667999999999999999999 8 9999998876
No 265
>PRK06904 replicative DNA helicase; Validated
Probab=41.31 E-value=1.2e+02 Score=31.27 Aligned_cols=57 Identities=16% Similarity=0.271 Sum_probs=38.4
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHh-cCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEc
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVL-NHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDL 69 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~-rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (476)
|++..-|+.|-..=++.+|...+. .| +.|.|++.+- .......+++.... ++....+
T Consensus 224 iiIaarPg~GKTafalnia~~~a~~~g-~~Vl~fSlEM-s~~ql~~Rlla~~s-~v~~~~i 281 (472)
T PRK06904 224 IIVAARPSMGKTTFAMNLCENAAMASE-KPVLVFSLEM-PAEQIMMRMLASLS-RVDQTKI 281 (472)
T ss_pred EEEEeCCCCChHHHHHHHHHHHHHhcC-CeEEEEeccC-CHHHHHHHHHHhhC-CCCHHHh
Confidence 566777999999999999998875 47 8999998774 22333444444333 4444333
No 266
>TIGR01860 VNFD nitrogenase vanadium-iron protein, alpha chain. This model represents the alpha chain of the vanadium-containing component of the vanadium-iron nitrogenase compound I. The complex also includes a second alpha chain, two beta chains and two delta chains. Compount I interacts with compound II also known as the iron-protein which transfers electrons to compound I where the catalysis occurs.
Probab=41.05 E-value=2.7e+02 Score=28.56 Aligned_cols=30 Identities=23% Similarity=0.304 Sum_probs=23.4
Q ss_pred HHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeE
Q 046326 101 KSVLTELCNPNALVIDLFCTQAFEICSQLSIPTY 134 (476)
Q Consensus 101 ~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v 134 (476)
.+.+++. +||++|.... ...+|+++|||++
T Consensus 390 ~~~~~~~-~pDliig~s~---~~~~A~klgiP~v 419 (461)
T TIGR01860 390 FEVLDLI-KPDVIFTGPR---VGELVKKLHIPYV 419 (461)
T ss_pred HHHHHhc-CCCEEEeCCc---chhhHhhcCCCEE
Confidence 3445666 9999998853 4568999999997
No 267
>PRK07773 replicative DNA helicase; Validated
Probab=40.67 E-value=1.4e+02 Score=33.43 Aligned_cols=36 Identities=19% Similarity=0.404 Sum_probs=30.1
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhc-CCcEEEEEEccC
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVLN-HGVHVSFLVITT 46 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~r-G~h~V~~~~~~~ 46 (476)
|++..-|+.|-..=.+.+|...+.+ | ..|.|++.+-
T Consensus 220 ivIagrPg~GKT~fal~ia~~~a~~~~-~~V~~fSlEm 256 (886)
T PRK07773 220 IIVAARPSMGKTTFGLDFARNCAIRHR-LAVAIFSLEM 256 (886)
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHhcC-CeEEEEecCC
Confidence 5667778999999999999998765 6 7899988774
No 268
>TIGR00379 cobB cobyrinic acid a,c-diamide synthase. This model describes cobyrinic acid a,c-diamide synthase, the cobB (cbiA in Salmonella) protein of cobalamin biosynthesis. It is responsible for the amidation of carboxylic groups at positions A and C of either cobyrinic acid or hydrogenobrynic acid. NH(2) groups are provided by glutamine and one molecule of ATP hydrogenolyzed for each amidation.
Probab=40.67 E-value=2.3e+02 Score=28.89 Aligned_cols=105 Identities=10% Similarity=0.117 Sum_probs=59.9
Q ss_pred EEEEcC-CCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHH
Q 046326 10 VAVLPS-PGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRL 88 (476)
Q Consensus 10 Ill~~~-p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (476)
|+|... ..-|-..-...|++.|+++| ++|...=+........+-..+. +... ..+ +.. +
T Consensus 2 ~~I~gT~t~vGKT~vt~~L~~~L~~~G-~~V~~fK~g~d~~D~~~~~~~~----g~~~--------~~l-----d~~--~ 61 (449)
T TIGR00379 2 VVIAGTSSGVGKTTISTGIMKALSRRK-LRVQPFKVGPDYIDPMFHTQAT----GRPS--------RNL-----DSF--F 61 (449)
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHHCC-CceeEEccCCCCCCHHHHHHHh----CCch--------hhC-----Ccc--c
Confidence 444433 34688899999999999999 8888774321100000000000 1000 011 000 0
Q ss_pred HHHHHHhhcHHHHHHHHhcC-CCCEEEECCCc------------chHHHHHHHcCCCeEEEeccc
Q 046326 89 HAIVEESLSKSLKSVLTELC-NPNALVIDLFC------------TQAFEICSQLSIPTYSFVTTS 140 (476)
Q Consensus 89 ~~~~~~~~~~~l~~~l~~~~-~pDlVI~D~~~------------~~~~~~A~~lgIP~v~~~~~~ 140 (476)
.... .+++.+.++. +.|++|++-.. ....++|+.++.|++++....
T Consensus 62 -----~~~~-~i~~~~~~~~~~~D~viVEGagGl~~g~~p~~~~~s~adlAk~l~~pVILV~~~~ 120 (449)
T TIGR00379 62 -----MSEA-QIQECFHRHSKGTDYSIIEGVRGLYDGISAITDYGSTASVAKALDAPIVLVMNCQ 120 (449)
T ss_pred -----CCHH-HHHHHHHHhcccCCEEEEecCCccccCCCCCCCCccHHHHHHHhCCCEEEEECCc
Confidence 0122 5666666654 78999966431 125679999999999998765
No 269
>cd01141 TroA_d Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.
Probab=40.53 E-value=45 Score=29.04 Aligned_cols=37 Identities=16% Similarity=0.268 Sum_probs=24.0
Q ss_pred HHHHHHHhcCCCCEEEECCCcch--HHHHHHHcCCCeEEEe
Q 046326 99 SLKSVLTELCNPNALVIDLFCTQ--AFEICSQLSIPTYSFV 137 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~~~~--~~~~A~~lgIP~v~~~ 137 (476)
.++.++ .+ +||+||....... ...--+..|||++.+.
T Consensus 61 n~E~ll-~l-~PDlii~~~~~~~~~~~~~l~~~gIpvv~i~ 99 (186)
T cd01141 61 NVELIV-AL-KPDLVILYGGFQAQTILDKLEQLGIPVLYVN 99 (186)
T ss_pred CHHHHh-cc-CCCEEEEecCCCchhHHHHHHHcCCCEEEeC
Confidence 444444 35 9999997653332 3335578999998764
No 270
>PRK06749 replicative DNA helicase; Provisional
Probab=40.34 E-value=1.3e+02 Score=30.43 Aligned_cols=36 Identities=14% Similarity=0.191 Sum_probs=31.9
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
|++..-|+.|-..=++.+|...+.+| +.|.|++.+-
T Consensus 189 iiIaarPgmGKTafal~ia~~~a~~g-~~v~~fSlEM 224 (428)
T PRK06749 189 VVLGARPSMGKTAFALNVGLHAAKSG-AAVGLFSLEM 224 (428)
T ss_pred EEEEeCCCCCchHHHHHHHHHHHhcC-CCEEEEEeeC
Confidence 56777799999999999999999888 9999998775
No 271
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism]
Probab=40.22 E-value=1.8e+02 Score=29.30 Aligned_cols=108 Identities=12% Similarity=0.124 Sum_probs=59.6
Q ss_pred EEEEEcC-CCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCC-CCCCCCCCchHH
Q 046326 9 HVAVLPS-PGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDV-SAVTSDDMPVVT 86 (476)
Q Consensus 9 rIll~~~-p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 86 (476)
+|+|... .+.|-..-.+.|.++|++|| ++|.-.=..+ +++ +-.|++.-.... .++ +.
T Consensus 2 ~vvIAg~~SG~GKTTvT~glm~aL~~rg-~~VqpfKvGP--------DYI-----DP~~H~~atG~~srNL-----D~-- 60 (451)
T COG1797 2 AVVIAGTSSGSGKTTVTLGLMRALRRRG-LKVQPFKVGP--------DYI-----DPGYHTAATGRPSRNL-----DS-- 60 (451)
T ss_pred ceEEecCCCCCcHHHHHHHHHHHHHhcC-CcccccccCC--------Ccc-----CchhhhHhhCCccCCC-----ch--
Confidence 3444433 46799999999999999999 8876543222 111 122222221110 111 11
Q ss_pred HHHHHHHHhhcHHHHHHHHhcC-CCCEEEE-------CC-----CcchHHHHHHHcCCCeEEEecccHHH
Q 046326 87 RLHAIVEESLSKSLKSVLTELC-NPNALVI-------DL-----FCTQAFEICSQLSIPTYSFVTTSVHF 143 (476)
Q Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~-~pDlVI~-------D~-----~~~~~~~~A~~lgIP~v~~~~~~~~~ 143 (476)
+ ++ ... .+++++.+.. ..|+.|. |- -.....++|+.+|+|+|.+.-+....
T Consensus 61 --~-mm--~~~-~v~~~f~~~~~~adi~vIEGVMGLfDG~~~~~~~gSTA~lAk~l~~PVvLVid~~~~s 124 (451)
T COG1797 61 --W-MM--GEE-GVRALFARAAADADIAVIEGVMGLFDGRGSATDTGSTADLAKLLGAPVVLVVDASGLS 124 (451)
T ss_pred --h-hc--CHH-HHHHHHHHhcCCCCEEEEeeccccccCCCCCcCCCCHHHHHHHhCCCEEEEEeCcchh
Confidence 0 00 112 5555555543 6666554 22 13456779999999999987655433
No 272
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=39.62 E-value=95 Score=28.04 Aligned_cols=60 Identities=15% Similarity=-0.006 Sum_probs=45.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcC
Q 046326 6 LQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLP 70 (476)
Q Consensus 6 ~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (476)
++.+|++.+.++-.|-....-++-.|+.+| ++|.++....|.. .+...+... +.+++.+.
T Consensus 87 ~~~~vvl~t~~gd~HdiG~~iv~~~l~~~G-~~Vi~LG~~vp~e--~~v~~~~~~--~~~~V~lS 146 (213)
T cd02069 87 SKGKIVLATVKGDVHDIGKNLVGVILSNNG-YEVIDLGVMVPIE--KILEAAKEH--KADIIGLS 146 (213)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCC-CEEEECCCCCCHH--HHHHHHHHc--CCCEEEEc
Confidence 467999999999999999999999999999 9999998764322 233333333 45555553
No 273
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=39.30 E-value=1.4e+02 Score=27.23 Aligned_cols=96 Identities=13% Similarity=0.149 Sum_probs=50.5
Q ss_pred CcEEEEecCCCC---CCCHHHHHHHHHHHHhCCCceEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcC-C-
Q 046326 269 DSVLFAVPGSGG---TLTAEQVTEMAWGLEQSKQRFIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQ-G- 343 (476)
Q Consensus 269 ~~vvyvs~GS~~---~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~-~- 343 (476)
++.|.+..|+.. .++.+.+.++++.|.+.+..++.. +++.+ . -....+..... .
T Consensus 105 ~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~-g~~~~----------------~----~~~~~~~~~~~~~~ 163 (247)
T PF01075_consen 105 KPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLL-GGPEE----------------Q----EKEIADQIAAGLQN 163 (247)
T ss_dssp SSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE---SSHH----------------H----HHHHHHHHHTTHTT
T ss_pred CCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEE-ccchH----------------H----HHHHHHHHHHhccc
Confidence 346777777753 667888999999998877665543 33210 0 01111111110 0
Q ss_pred CCeEeccc--cch-HHhhccCCccceecccCchHHHHHHhcCCcEeec
Q 046326 344 AGMVVPSW--APQ-VHILRHPSTGGFLSHCGWNSTLESICHGVPMIAW 388 (476)
Q Consensus 344 ~~~~~~~~--~pq-~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 388 (476)
..+.+.+- +.+ ..++.++++ +|+.- .|.++=|.+.|+|+|++
T Consensus 164 ~~~~~~~~~~l~e~~ali~~a~~--~I~~D-tg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 164 PVINLAGKTSLRELAALISRADL--VIGND-TGPMHLAAALGTPTVAL 208 (247)
T ss_dssp TTEEETTTS-HHHHHHHHHTSSE--EEEES-SHHHHHHHHTT--EEEE
T ss_pred ceEeecCCCCHHHHHHHHhcCCE--EEecC-ChHHHHHHHHhCCEEEE
Confidence 12333222 233 468888885 77764 47788899999999998
No 274
>KOG0832 consensus Mitochondrial/chloroplast ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=39.19 E-value=28 Score=31.35 Aligned_cols=114 Identities=17% Similarity=0.144 Sum_probs=57.0
Q ss_pred CccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHHHHHH--H
Q 046326 17 GLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLHAIVE--E 94 (476)
Q Consensus 17 ~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 94 (476)
+..|+.-.+.+...++.+| =-+.|+.... .....+.....+. ..+.+......++ ...+... +..... .
T Consensus 90 T~~~Lr~A~~fVa~vA~r~-GiILFv~tn~-~~~~~ve~aA~r~----~gy~~~~~w~~G~-lTN~~~l--~g~~~~~~~ 160 (251)
T KOG0832|consen 90 TASYLRRALNFVAHVAHRG-GIILFVGTNN-GFKDLVERAARRA----GGYSHNRKWLGGL-LTNAREL--FGALVRKFL 160 (251)
T ss_pred HHHHHHHHHHHHHHHHhcC-CeEEEEecCc-chHHHHHHHHHHh----cCceeeeeeccce-eecchhh--ccccccccc
Confidence 5678888899999999998 5566665443 3333333332221 1111221122222 1111111 111111 1
Q ss_pred hhcHHHHHHHHhcCCCCEEEE-CCCcc-hHHHHHHHcCCCeEEEecccH
Q 046326 95 SLSKSLKSVLTELCNPNALVI-DLFCT-QAFEICSQLSIPTYSFVTTSV 141 (476)
Q Consensus 95 ~~~~~l~~~l~~~~~pDlVI~-D~~~~-~~~~~A~~lgIP~v~~~~~~~ 141 (476)
+.+ ...-++... .+||||+ |..-- .++.=|.+++||+|.+.=+.+
T Consensus 161 ~~p-d~~~f~~t~-~~D~vvvln~~e~~sAilEA~K~~IPTIgIVDtN~ 207 (251)
T KOG0832|consen 161 SLP-DALCFLPTL-TPDLVVVLNPEENHSAILEAAKMAIPTIGIVDTNC 207 (251)
T ss_pred CCC-cceeecccC-CcceeEecCcccccHHHHHHHHhCCCeEEEecCCC
Confidence 122 222222233 8899885 54443 455578899999998765444
No 275
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=38.84 E-value=57 Score=28.70 Aligned_cols=33 Identities=15% Similarity=0.126 Sum_probs=23.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEcc
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVIT 45 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~ 45 (476)
|+|.++. +.|++- -.|.++...|| |+||-++-.
T Consensus 1 mKIaiIg--AsG~~G--s~i~~EA~~RG-HeVTAivRn 33 (211)
T COG2910 1 MKIAIIG--ASGKAG--SRILKEALKRG-HEVTAIVRN 33 (211)
T ss_pred CeEEEEe--cCchhH--HHHHHHHHhCC-CeeEEEEeC
Confidence 4565553 455544 36889999999 999999843
No 276
>PRK05636 replicative DNA helicase; Provisional
Probab=38.28 E-value=2.3e+02 Score=29.45 Aligned_cols=36 Identities=17% Similarity=0.324 Sum_probs=29.0
Q ss_pred EEEEcCCCccCHHHHHHHHHHHH-hcCCcEEEEEEccC
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLV-LNHGVHVSFLVITT 46 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~-~rG~h~V~~~~~~~ 46 (476)
|++..-|+.|-..=.+.+|...+ +.| ..|.|++.+-
T Consensus 268 iiiaarpg~GKT~~al~~a~~~a~~~g-~~v~~fSlEM 304 (505)
T PRK05636 268 IIVAARPGVGKSTLALDFMRSASIKHN-KASVIFSLEM 304 (505)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhCC-CeEEEEEeeC
Confidence 56677789999999999998876 457 7888888764
No 277
>TIGR03880 KaiC_arch_3 KaiC domain protein, AF_0351 family. This model represents a rather narrowly distributed archaeal protein family in which members have a single copy of the KaiC domain. This stands in contrast to the circadian clock protein KaiC itself, with two copies of the domain. Members are expected to have weak ATPase activity, by homology to the autokinase/autophosphorylase KaiC itself.
Probab=38.08 E-value=1.4e+02 Score=26.84 Aligned_cols=100 Identities=17% Similarity=0.205 Sum_probs=54.0
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHH
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLH 89 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (476)
+++.--|+.|-..=.+.++....++| +.|.+++.+.+. ..+......+ +..+...-.. .+.-.+.+. ..+.
T Consensus 19 ~li~G~~G~GKt~~~~~~~~~~~~~g-~~~~y~s~e~~~--~~l~~~~~~~--~~~~~~~~~~---~l~~~~~~~-~~~~ 89 (224)
T TIGR03880 19 IVVIGEYGTGKTTFSLQFLYQGLKNG-EKAMYISLEERE--ERILGYAKSK--GWDLEDYIDK---SLYIVRLDP-SDFK 89 (224)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhCC-CeEEEEECCCCH--HHHHHHHHHc--CCChHHHHhC---CeEEEecCH-HHHH
Confidence 45555578888888888888877788 999999987532 2233333333 2222111000 000000000 1111
Q ss_pred HHHHHhhcHHHHHHHHhcCCCCEEEECCCcc
Q 046326 90 AIVEESLSKSLKSVLTELCNPNALVIDLFCT 120 (476)
Q Consensus 90 ~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~ 120 (476)
........ .++.++++. ++++||.|.+..
T Consensus 90 ~~~~~l~~-~~~~~i~~~-~~~~vVIDsls~ 118 (224)
T TIGR03880 90 TSLNRIKN-ELPILIKEL-GASRVVIDPISL 118 (224)
T ss_pred hhHHHHHH-HHHHHHHHh-CCCEEEEcChHH
Confidence 22233334 567777777 999999997543
No 278
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=38.01 E-value=3.5e+02 Score=25.43 Aligned_cols=38 Identities=16% Similarity=0.223 Sum_probs=29.6
Q ss_pred cccchHHhhccCCccceecccCchHHHHHHhcCCcEeec
Q 046326 350 SWAPQVHILRHPSTGGFLSHCGWNSTLESICHGVPMIAW 388 (476)
Q Consensus 350 ~~~pq~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 388 (476)
++-|+.+.|+.++. .++|---.|-..||...|+|+.+.
T Consensus 234 g~NPY~~~La~Ady-ii~TaDSinM~sEAasTgkPv~~~ 271 (329)
T COG3660 234 GYNPYIDMLAAADY-IISTADSINMCSEAASTGKPVFIL 271 (329)
T ss_pred CCCchHHHHhhcce-EEEecchhhhhHHHhccCCCeEEE
Confidence 55689999998885 344555568899999999997654
No 279
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=37.53 E-value=65 Score=30.84 Aligned_cols=78 Identities=17% Similarity=0.208 Sum_probs=54.7
Q ss_pred eccccc---hHHhhccCCccceecc--cCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcC
Q 046326 348 VPSWAP---QVHILRHPSTGGFLSH--CGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIG 422 (476)
Q Consensus 348 ~~~~~p---q~~iL~~~~~~~~I~H--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~ 422 (476)
+.+++| +..+|++++++-|+|+ =|.|++.-.+..|+|.++- -+-+.|.... +.|+=+-.+. +.++
T Consensus 211 L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~---r~n~fwqdl~---e~gv~Vlf~~----d~L~ 280 (322)
T PRK02797 211 LTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLS---RDNPFWQDLT---EQGLPVLFTG----DDLD 280 (322)
T ss_pred hhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEe---cCCchHHHHH---hCCCeEEecC----Cccc
Confidence 445555 6679999999777776 5899999999999999986 3334444332 3455554455 5788
Q ss_pred HHHHHHHHHHHhc
Q 046326 423 REEIERVVRLVME 435 (476)
Q Consensus 423 ~~~l~~ai~~~l~ 435 (476)
...+.++=+++..
T Consensus 281 ~~~v~e~~rql~~ 293 (322)
T PRK02797 281 EDIVREAQRQLAS 293 (322)
T ss_pred HHHHHHHHHHHHh
Confidence 8888887665543
No 280
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=37.31 E-value=1.3e+02 Score=30.37 Aligned_cols=38 Identities=11% Similarity=0.059 Sum_probs=33.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
.-|+|+-.++.|-..-...||..|+++| +.|.+++.++
T Consensus 101 ~vi~lvG~~GvGKTTtaaKLA~~l~~~G-~kV~lV~~D~ 138 (429)
T TIGR01425 101 NVIMFVGLQGSGKTTTCTKLAYYYQRKG-FKPCLVCADT 138 (429)
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHCC-CCEEEEcCcc
Confidence 3466777789999999999999999999 9999998875
No 281
>TIGR00665 DnaB replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites.
Probab=37.30 E-value=3.7e+02 Score=27.18 Aligned_cols=36 Identities=17% Similarity=0.341 Sum_probs=30.5
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHh-cCCcEEEEEEccC
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVL-NHGVHVSFLVITT 46 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~-rG~h~V~~~~~~~ 46 (476)
+++...|+.|-..=.+.++..++. .| +.|.+++.+-
T Consensus 198 ~vi~g~pg~GKT~~~l~~a~~~a~~~g-~~vl~~SlEm 234 (434)
T TIGR00665 198 IILAARPSMGKTAFALNIAENAAIKEG-KPVAFFSLEM 234 (434)
T ss_pred EEEEeCCCCChHHHHHHHHHHHHHhCC-CeEEEEeCcC
Confidence 566677899999999999999875 57 8999999885
No 282
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B. Glycine reductase is a complex with two selenoprotein subunits, A and B. This model represents the glycine reductase selenoprotein B. Closely related to it, but excluded from this model, are selenoprotein B subunits of betaine reductase and sarcosine reductase. All contain selenocysteine incorporated during translation at a specific UGA codon.
Probab=37.19 E-value=55 Score=32.63 Aligned_cols=45 Identities=13% Similarity=0.263 Sum_probs=31.8
Q ss_pred HHHHhhcHHHHHHHHhcCCCCEEEECCCcch-------H---HHHHHHcCCCeEEEe
Q 046326 91 IVEESLSKSLKSVLTELCNPNALVIDLFCTQ-------A---FEICSQLSIPTYSFV 137 (476)
Q Consensus 91 ~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~-------~---~~~A~~lgIP~v~~~ 137 (476)
..+.... .+.+++++. +||++|+.+.+-. + ..+.+++|||.++-.
T Consensus 60 n~eea~~-~i~~mv~k~-~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vtaM 114 (431)
T TIGR01917 60 NLEEAKA-KVLEMIKGA-NPDIFIAGPAFNAGRYGMAAGAITKAVQDELGIKAFTAM 114 (431)
T ss_pred CHHHHHH-HHHHHHHhc-CCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEEe
Confidence 3444555 788888888 9999999765532 1 114577999998754
No 283
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family. This model represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. This model is built in fragment mode to assist in recognizing fragmentary translations. All members are expected to contain an internal TGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon.
Probab=37.15 E-value=56 Score=32.60 Aligned_cols=47 Identities=17% Similarity=0.225 Sum_probs=31.3
Q ss_pred ceecccCchHHHHHHhcCCcEeeccccc--hhhhhhhhhcceeeeeEEeccc
Q 046326 365 GFLSHCGWNSTLESICHGVPMIAWPLYA--EQRMNAAMLTAEETGVAVKPET 414 (476)
Q Consensus 365 ~~I~HgG~~s~~eal~~GvP~l~~P~~~--DQ~~na~~~~~~~~G~G~~l~~ 414 (476)
+.-|.||.--+-|-=.+|+|.+.+--.. -+-.-|.|+ .. ++++--+.
T Consensus 347 gtC~r~~a~m~keiE~~GiPvv~~~~~~pis~tvGanri--vp-~~~ip~Pl 395 (431)
T TIGR01918 347 GTCTRCGATMVKEIERAGIPVVHMCTVIPIALTVGANRI--VP-TIAIPHPL 395 (431)
T ss_pred CcchhHHHHHHHHHHHcCCCEEEEeecccHhhhcCccce--ec-ccCcCCCC
Confidence 4677888888888889999999774321 233346676 33 66665554
No 284
>TIGR00416 sms DNA repair protein RadA. The gene protuct codes for a probable ATP-dependent protease involved in both DNA repair and degradation of proteins, peptides, glycopeptides. Also known as sms. Residues 11-28 of the SEED alignment contain a putative Zn binding domain. Residues 110-117 of the seed contain a putative ATP binding site both documented in Haemophilus and in Listeria monocytogenes. for E.coli see ( J. BACTERIOL. 178:5045-5048(1996)).
Probab=37.00 E-value=1.9e+02 Score=29.50 Aligned_cols=102 Identities=23% Similarity=0.271 Sum_probs=62.2
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHH
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLH 89 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (476)
+++.--|+.|--.=++.++..+.++| +.|.+++.+... ..+.....++ ++.+..+ .-. .+
T Consensus 97 ilI~G~pGsGKTTL~lq~a~~~a~~g-~kvlYvs~EEs~--~qi~~ra~rl--g~~~~~l-----~~~-~e--------- 156 (454)
T TIGR00416 97 ILIGGDPGIGKSTLLLQVACQLAKNQ-MKVLYVSGEESL--QQIKMRAIRL--GLPEPNL-----YVL-SE--------- 156 (454)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHhcC-CcEEEEECcCCH--HHHHHHHHHc--CCChHHe-----EEc-CC---------
Confidence 45555679999999999999999998 889999877422 2222222222 2211100 000 10
Q ss_pred HHHHHhhcHHHHHHHHhcCCCCEEEECCCcch---------------------HHHHHHHcCCCeEEEe
Q 046326 90 AIVEESLSKSLKSVLTELCNPNALVIDLFCTQ---------------------AFEICSQLSIPTYSFV 137 (476)
Q Consensus 90 ~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~---------------------~~~~A~~lgIP~v~~~ 137 (476)
.... .+.+.+++. ++|+||.|..... -..+|+..|+.++.+.
T Consensus 157 ----~~~~-~I~~~i~~~-~~~~vVIDSIq~l~~~~~~~~~g~~~q~r~~~~~L~~~ak~~giTvllt~ 219 (454)
T TIGR00416 157 ----TNWE-QICANIEEE-NPQACVIDSIQTLYSPDISSAPGSVSQVRECTAELMRLAKTRGIAIFIVG 219 (454)
T ss_pred ----CCHH-HHHHHHHhc-CCcEEEEecchhhcccccccCCCCHHHHHHHHHHHHHHHHHhCCEEEEEe
Confidence 0112 455666667 9999999965421 1125788999988875
No 285
>KOG2836 consensus Protein tyrosine phosphatase IVA1 [Signal transduction mechanisms]
Probab=36.99 E-value=2.4e+02 Score=23.29 Aligned_cols=58 Identities=16% Similarity=0.129 Sum_probs=41.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCC
Q 046326 5 SLQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPV 72 (476)
Q Consensus 5 ~~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (476)
-++||++|.-.|+-.-++-++ ++|.+.| ..-.+-+.+..++-..+.+. ||+....++.
T Consensus 14 y~~MrFLIThnPtnaTln~fi---eELkKyg-vttvVRVCe~TYdt~~lek~------GI~Vldw~f~ 71 (173)
T KOG2836|consen 14 YKNMRFLITHNPTNATLNKFI---EELKKYG-VTTVVRVCEPTYDTTPLEKE------GITVLDWPFD 71 (173)
T ss_pred ccceEEEEecCCCchhHHHHH---HHHHhcC-CeEEEEecccccCCchhhhc------CceEeecccc
Confidence 467999999999998888765 7999999 65555555543444333333 8888888763
No 286
>TIGR01861 ANFD nitrogenase iron-iron protein, alpha chain. This model represents the all-iron variant of the nitrogenase component I alpha chain. Molybdenum-iron and vanadium iron forms are also found. The complete complex contains two alpha chains, two beta chains and two delta chains. The component I associates with component II also known as the iron protein which serves to provide electrons for component I.
Probab=36.96 E-value=3.1e+02 Score=28.52 Aligned_cols=31 Identities=13% Similarity=0.293 Sum_probs=24.0
Q ss_pred HHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEE
Q 046326 102 SVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSF 136 (476)
Q Consensus 102 ~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~ 136 (476)
+.+++. +||++|.... ...+|+++|||++-.
T Consensus 392 ~~l~~~-~~Dllig~s~---~~~~A~k~gIP~ld~ 422 (513)
T TIGR01861 392 EAMEML-KPDIILTGKR---PGEVSKKMRVPYLNA 422 (513)
T ss_pred HHHHhc-CCCEEEecCc---cchhHhhcCCCEEEc
Confidence 445667 9999999865 336899999998753
No 287
>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]
Probab=36.89 E-value=1.3e+02 Score=27.37 Aligned_cols=37 Identities=16% Similarity=0.215 Sum_probs=31.2
Q ss_pred EEEEEcC--CCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 9 HVAVLPS--PGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 9 rIll~~~--p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
+|.+++. ++-|-..-.-.|+..|+.+| +.|.++-.+-
T Consensus 3 ~iIVvTSGKGGVGKTTttAnig~aLA~~G-kKv~liD~Di 41 (272)
T COG2894 3 RIIVVTSGKGGVGKTTTTANIGTALAQLG-KKVVLIDFDI 41 (272)
T ss_pred eEEEEecCCCCcCccchhHHHHHHHHHcC-CeEEEEecCc
Confidence 4666666 57899999999999999999 9999987664
No 288
>PRK10637 cysG siroheme synthase; Provisional
Probab=36.29 E-value=2.6e+02 Score=28.56 Aligned_cols=92 Identities=4% Similarity=0.060 Sum_probs=47.7
Q ss_pred HHhhccCCccceecccCchHHHHHHh-----cCCcEeeccccchhhh-----hhhhhcceeeeeEEeccccCCCCCcCHH
Q 046326 355 VHILRHPSTGGFLSHCGWNSTLESIC-----HGVPMIAWPLYAEQRM-----NAAMLTAEETGVAVKPETEPGKKVIGRE 424 (476)
Q Consensus 355 ~~iL~~~~~~~~I~HgG~~s~~eal~-----~GvP~l~~P~~~DQ~~-----na~~~~~~~~G~G~~l~~~~~~~~~~~~ 424 (476)
...|....+ +|.--+--.+.+.++ .|++.-+ .|++. +-..+ ++-++-+.+.. .+..-.-+.
T Consensus 67 ~~dl~~~~l--v~~at~d~~~n~~i~~~a~~~~~lvN~----~d~~~~~~f~~pa~~--~~g~l~iaisT-~G~sP~~a~ 137 (457)
T PRK10637 67 ESLLDTCWL--AIAATDDDAVNQRVSEAAEARRIFCNV----VDAPKAASFIMPSII--DRSPLMVAVSS-GGTSPVLAR 137 (457)
T ss_pred hHHhCCCEE--EEECCCCHHHhHHHHHHHHHcCcEEEE----CCCcccCeEEEeeEE--ecCCEEEEEEC-CCCCcHHHH
Confidence 344555554 555555544554443 4555443 34433 33334 44445566665 221223345
Q ss_pred HHHHHHHHHhcCChhHHHHHHHHHHHHHHHHH
Q 046326 425 EIERVVRLVMEGEEGKVMRRRVQELKESASRE 456 (476)
Q Consensus 425 ~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~ 456 (476)
.|++.|.+++. ++...+-+...++++.+++.
T Consensus 138 ~lr~~ie~~~~-~~~~~~~~~~~~~R~~~k~~ 168 (457)
T PRK10637 138 LLREKLESLLP-QHLGQVAKYAGQLRGRVKQQ 168 (457)
T ss_pred HHHHHHHHhcc-hhHHHHHHHHHHHHHHHHHh
Confidence 67888877773 33444666666666666654
No 289
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=36.28 E-value=96 Score=25.91 Aligned_cols=37 Identities=19% Similarity=0.258 Sum_probs=28.8
Q ss_pred CcEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEEe
Q 046326 269 DSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQRFIWVVR 306 (476)
Q Consensus 269 ~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~ 306 (476)
..+|+|++||......+.++++++.+. .+.+++++..
T Consensus 51 ~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~ 87 (150)
T cd01840 51 RKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNP 87 (150)
T ss_pred CCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEEC
Confidence 349999999998777888888988874 4577777653
No 290
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=36.27 E-value=53 Score=31.60 Aligned_cols=35 Identities=20% Similarity=0.347 Sum_probs=28.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEcc
Q 046326 5 SLQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVIT 45 (476)
Q Consensus 5 ~~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~ 45 (476)
|.+|+|+++-.|+.| ..+|..|++.| |+|+++.-.
T Consensus 3 ~~~m~I~IiG~GaiG-----~~lA~~L~~~g-~~V~~~~r~ 37 (313)
T PRK06249 3 SETPRIGIIGTGAIG-----GFYGAMLARAG-FDVHFLLRS 37 (313)
T ss_pred CcCcEEEEECCCHHH-----HHHHHHHHHCC-CeEEEEEeC
Confidence 456899999888877 46788899999 999999764
No 291
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=36.05 E-value=3e+02 Score=26.18 Aligned_cols=69 Identities=10% Similarity=-0.094 Sum_probs=37.0
Q ss_pred EeecCCCCCCCCCCCChhhHhhhccCCCCCcEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEEecC
Q 046326 240 NPIGPLIKQDEPLSASDEECLAWLDKQPPDSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQRFIWVVRMP 308 (476)
Q Consensus 240 ~~vGpl~~~~~~~~~~~~~~~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 308 (476)
.|+|....++...+..-.++..+..+..-+.+-.-............+..+.+++++.|+++++-+|..
T Consensus 99 rf~~~~~v~p~~~~~a~~E~er~v~~~gf~g~~l~p~~~~~~~~~~~~~pi~~~a~~~gvpv~ihtG~~ 167 (293)
T COG2159 99 RFVGFARVDPRDPEAAAEELERRVRELGFVGVKLHPVAQGFYPDDPRLYPIYEAAEELGVPVVIHTGAG 167 (293)
T ss_pred ceeeeeeeCCCchHHHHHHHHHHHHhcCceEEEecccccCCCCCChHHHHHHHHHHHcCCCEEEEeCCC
Confidence 355544433321112334566665543322122222222234455557889999999999999966653
No 292
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=35.47 E-value=74 Score=29.87 Aligned_cols=54 Identities=15% Similarity=0.137 Sum_probs=36.5
Q ss_pred cCCccceecccCchHHHHHHh------cCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHH
Q 046326 360 HPSTGGFLSHCGWNSTLESIC------HGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLV 433 (476)
Q Consensus 360 ~~~~~~~I~HgG~~s~~eal~------~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~ 433 (476)
.++ ++|+-||-||+..++. .++|++++-. -++ |.- -.++.+++.+++.++
T Consensus 35 ~~D--lvi~iGGDGT~L~a~~~~~~~~~~iPilGIN~--------G~l-------GFL-------~~~~~~~~~~~l~~i 90 (265)
T PRK04885 35 NPD--IVISVGGDGTLLSAFHRYENQLDKVRFVGVHT--------GHL-------GFY-------TDWRPFEVDKLVIAL 90 (265)
T ss_pred CCC--EEEEECCcHHHHHHHHHhcccCCCCeEEEEeC--------CCc-------eec-------ccCCHHHHHHHHHHH
Confidence 445 4999999999999986 4788887732 122 211 134567777777777
Q ss_pred hcCC
Q 046326 434 MEGE 437 (476)
Q Consensus 434 l~~~ 437 (476)
++++
T Consensus 91 ~~g~ 94 (265)
T PRK04885 91 AKDP 94 (265)
T ss_pred HcCC
Confidence 7654
No 293
>PRK09620 hypothetical protein; Provisional
Probab=35.38 E-value=58 Score=29.78 Aligned_cols=39 Identities=18% Similarity=0.051 Sum_probs=27.2
Q ss_pred CCCEEEEEcCCCccCHHH------------HHHHHHHHHhcCCcEEEEEEcc
Q 046326 6 LQPHVAVLPSPGLGHLIP------------LLEFAKRLVLNHGVHVSFLVIT 45 (476)
Q Consensus 6 ~~~rIll~~~p~~GHi~P------------~l~La~~L~~rG~h~V~~~~~~ 45 (476)
+.++|++...|+.=.+.| -..||++|.++| |+|+++...
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~G-a~V~li~g~ 52 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKG-AHVIYLHGY 52 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCC-CeEEEEeCC
Confidence 356777766654443333 257999999999 999998754
No 294
>PRK14098 glycogen synthase; Provisional
Probab=35.24 E-value=61 Score=33.48 Aligned_cols=39 Identities=10% Similarity=0.146 Sum_probs=30.1
Q ss_pred CCCCEEEEEcC--------CCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 5 SLQPHVAVLPS--------PGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 5 ~~~~rIll~~~--------p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
+..|+|++++. |+.|++ .-+|.++|+++| |+|.++.|.-
T Consensus 3 ~~~~~il~v~~E~~p~~k~Ggl~dv--~~~Lp~al~~~g-~~v~v~~P~y 49 (489)
T PRK14098 3 RRNFKVLYVSGEVSPFVRVSALADF--MASFPQALEEEG-FEARIMMPKY 49 (489)
T ss_pred CCCcEEEEEeecchhhcccchHHHH--HHHHHHHHHHCC-CeEEEEcCCC
Confidence 34489998875 455554 567899999999 9999999863
No 295
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B ....
Probab=35.00 E-value=46 Score=31.96 Aligned_cols=38 Identities=11% Similarity=0.094 Sum_probs=31.9
Q ss_pred CEEEEEcC-CCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 8 PHVAVLPS-PGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 8 ~rIll~~~-p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
||++|+.. |+-|-..-..++|-.++++| ++|.+++.++
T Consensus 1 ~r~~~~~GKGGVGKTT~aaA~A~~~A~~G-~rtLlvS~Dp 39 (305)
T PF02374_consen 1 MRILFFGGKGGVGKTTVAAALALALARRG-KRTLLVSTDP 39 (305)
T ss_dssp -SEEEEEESTTSSHHHHHHHHHHHHHHTT-S-EEEEESST
T ss_pred CeEEEEecCCCCCcHHHHHHHHHHHhhCC-CCeeEeecCC
Confidence 46777766 78899999999999999999 9999999886
No 296
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=34.97 E-value=78 Score=27.07 Aligned_cols=26 Identities=15% Similarity=0.225 Sum_probs=20.2
Q ss_pred ceecccCc------hHHHHHHhcCCcEeeccc
Q 046326 365 GFLSHCGW------NSTLESICHGVPMIAWPL 390 (476)
Q Consensus 365 ~~I~HgG~------~s~~eal~~GvP~l~~P~ 390 (476)
++++|.|- +.+.+|...++|+|++.-
T Consensus 62 v~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 93 (162)
T cd07038 62 ALVTTYGVGELSALNGIAGAYAEHVPVVHIVG 93 (162)
T ss_pred EEEEcCCccHHHHHHHHHHHHHcCCCEEEEec
Confidence 46666663 478899999999999953
No 297
>cd01122 GP4d_helicase GP4d_helicase is a homohexameric 5'-3' helicases. Helicases couple NTP hydrolysis to the unwinding of nucleic acid duplexes into their component strands.
Probab=34.87 E-value=1e+02 Score=28.68 Aligned_cols=37 Identities=22% Similarity=0.337 Sum_probs=31.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhc-CCcEEEEEEccC
Q 046326 9 HVAVLPSPGLGHLIPLLEFAKRLVLN-HGVHVSFLVITT 46 (476)
Q Consensus 9 rIll~~~p~~GHi~P~l~La~~L~~r-G~h~V~~~~~~~ 46 (476)
-+++...++.|-..-.+.++..++.. | +.|.|++.+.
T Consensus 32 ~~~i~g~~G~GKT~l~~~~~~~~~~~~g-~~vl~iS~E~ 69 (271)
T cd01122 32 LIILTAGTGVGKTTFLREYALDLITQHG-VRVGTISLEE 69 (271)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHhcC-ceEEEEEccc
Confidence 35566668999999999999999777 8 9999999875
No 298
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=34.86 E-value=2.5e+02 Score=27.29 Aligned_cols=35 Identities=11% Similarity=0.180 Sum_probs=26.1
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEec
Q 046326 99 SLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFVT 138 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~ 138 (476)
.+..+++ +.|++|+.- .....+|..+|+|++.++.
T Consensus 254 el~ali~---~a~l~I~nD--TGp~HlAaA~g~P~valfG 288 (348)
T PRK10916 254 QAVILIA---ACKAIVTND--SGLMHVAAALNRPLVALYG 288 (348)
T ss_pred HHHHHHH---hCCEEEecC--ChHHHHHHHhCCCEEEEEC
Confidence 4455555 669999753 3566799999999998875
No 299
>PRK12311 rpsB 30S ribosomal protein S2/unknown domain fusion protein; Provisional
Probab=34.78 E-value=2.1e+02 Score=27.78 Aligned_cols=33 Identities=27% Similarity=0.362 Sum_probs=24.0
Q ss_pred CCCEEEE-CCCc-chHHHHHHHcCCCeEEEecccH
Q 046326 109 NPNALVI-DLFC-TQAFEICSQLSIPTYSFVTTSV 141 (476)
Q Consensus 109 ~pDlVI~-D~~~-~~~~~~A~~lgIP~v~~~~~~~ 141 (476)
.||+||+ |... ..++.=|.++|||+|.++=+.+
T Consensus 152 ~Pd~viv~d~~~e~~AI~EA~kl~IPvIaivDTn~ 186 (326)
T PRK12311 152 LPDLLFVIDTNKEDIAIQEAQRLGIPVAAIVDTNC 186 (326)
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEeeCCC
Confidence 7999884 5433 3455579999999999876554
No 300
>PRK07414 cob(I)yrinic acid a,c-diamide adenosyltransferase; Validated
Probab=34.77 E-value=3.1e+02 Score=23.95 Aligned_cols=106 Identities=13% Similarity=0.078 Sum_probs=59.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHH
Q 046326 7 QPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVT 86 (476)
Q Consensus 7 ~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (476)
+.-|-+++..+.|-..-.+.+|-+-+-+| -+|.++-.=......--....+..+ ++.++..+....-.. . .....
T Consensus 21 ~Gli~VYtGdGKGKTTAAlGlalRAaG~G-~rV~iiQFlKg~~~~GE~~~l~~~~-~v~~~~~g~~~~~~~-~-~~~~~- 95 (178)
T PRK07414 21 EGLVQVFTSSQRNFFTSVMAQALRIAGQG-TPVLIVQFLKGGIQQGPDRPIQLGQ-NLDWVRCDLPRCLDT-P-HLDES- 95 (178)
T ss_pred CCEEEEEeCCCCCchHHHHHHHHHHhcCC-CEEEEEEEecCCCcchHHHHHHhCC-CcEEEECCCCCeeeC-C-CcCHH-
Confidence 44688999999999988777776666666 7888876543110000112223344 688877764311111 1 11101
Q ss_pred HHHHHHHHhhcHHHHHHHHhcCCCCEEEECCCcc
Q 046326 87 RLHAIVEESLSKSLKSVLTELCNPNALVIDLFCT 120 (476)
Q Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~ 120 (476)
-......... ..++.+.+- .+|+||.|....
T Consensus 96 -~~~~~~~~~~-~a~~~l~~~-~~dlvVLDEi~~ 126 (178)
T PRK07414 96 -EKKALQELWQ-YTQAVVDEG-RYSLVVLDELSL 126 (178)
T ss_pred -HHHHHHHHHH-HHHHHHhCC-CCCEEEEehhHH
Confidence 1122333333 455555555 999999998544
No 301
>KOG0081 consensus GTPase Rab27, small G protein superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=34.74 E-value=1e+02 Score=26.29 Aligned_cols=44 Identities=18% Similarity=0.403 Sum_probs=30.6
Q ss_pred HHHHHHHhc-----C-CCCEEEECCCc----------chHHHHHHHcCCCeEEEecccHH
Q 046326 99 SLKSVLTEL-----C-NPNALVIDLFC----------TQAFEICSQLSIPTYSFVTTSVH 142 (476)
Q Consensus 99 ~l~~~l~~~-----~-~pDlVI~D~~~----------~~~~~~A~~lgIP~v~~~~~~~~ 142 (476)
.+++++..+ + +||+|+..... --+..+|+++|||++-.+.+...
T Consensus 108 nvrnWlSQL~~hAYcE~PDivlcGNK~DL~~~R~Vs~~qa~~La~kyglPYfETSA~tg~ 167 (219)
T KOG0081|consen 108 NVRNWLSQLQTHAYCENPDIVLCGNKADLEDQRVVSEDQAAALADKYGLPYFETSACTGT 167 (219)
T ss_pred HHHHHHHHHHHhhccCCCCEEEEcCccchhhhhhhhHHHHHHHHHHhCCCeeeeccccCc
Confidence 556777665 5 99999975322 13455899999999887665543
No 302
>PRK08840 replicative DNA helicase; Provisional
Probab=34.70 E-value=2.7e+02 Score=28.57 Aligned_cols=57 Identities=16% Similarity=0.272 Sum_probs=38.3
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHh-cCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEc
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVL-NHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDL 69 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~-rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (476)
|++..-|+.|-..=.+.+|...+. .| +.|.|++.+- .......+.+.... ++....+
T Consensus 220 iviaarPg~GKTafalnia~~~a~~~~-~~v~~fSlEM-s~~ql~~Rlla~~s-~v~~~~i 277 (464)
T PRK08840 220 IIVAARPSMGKTTFAMNLCENAAMDQD-KPVLIFSLEM-PAEQLMMRMLASLS-RVDQTKI 277 (464)
T ss_pred EEEEeCCCCchHHHHHHHHHHHHHhCC-CeEEEEeccC-CHHHHHHHHHHhhC-CCCHHHH
Confidence 566777899999999999999874 57 8999998874 22333444444333 4444333
No 303
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=34.55 E-value=3e+02 Score=23.69 Aligned_cols=91 Identities=14% Similarity=0.129 Sum_probs=51.1
Q ss_pred HHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHHHHHHHhhcHHHHHH
Q 046326 24 LLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLHAIVEESLSKSLKSV 103 (476)
Q Consensus 24 ~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 103 (476)
+..|.+...++| ..|.++...............+.+| ++.++....+.... .... .+.+.
T Consensus 35 ~~~ll~~~~~~~-~~v~llG~~~~~~~~~~~~l~~~yp-~l~i~g~~~g~~~~-----------------~~~~-~i~~~ 94 (171)
T cd06533 35 MPALLELAAQKG-LRVFLLGAKPEVLEKAAERLRARYP-GLKIVGYHHGYFGP-----------------EEEE-EIIER 94 (171)
T ss_pred HHHHHHHHHHcC-CeEEEECCCHHHHHHHHHHHHHHCC-CcEEEEecCCCCCh-----------------hhHH-HHHHH
Confidence 345666666777 8999987664333333334555567 88887753221110 0111 24445
Q ss_pred HHhcCCCCEEEECCCcc----hHHHHHHHcCCCeEE
Q 046326 104 LTELCNPNALVIDLFCT----QAFEICSQLSIPTYS 135 (476)
Q Consensus 104 l~~~~~pDlVI~D~~~~----~~~~~A~~lgIP~v~ 135 (476)
+.+. +||+|++..-++ |.....+.++.+++.
T Consensus 95 I~~~-~pdiv~vglG~PkQE~~~~~~~~~l~~~v~~ 129 (171)
T cd06533 95 INAS-GADILFVGLGAPKQELWIARHKDRLPVPVAI 129 (171)
T ss_pred HHHc-CCCEEEEECCCCHHHHHHHHHHHHCCCCEEE
Confidence 5566 999999875444 444455555545443
No 304
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=34.51 E-value=1.4e+02 Score=29.09 Aligned_cols=98 Identities=10% Similarity=0.115 Sum_probs=58.5
Q ss_pred CcEEEEecCCC---CCCCHHHHHHHHHHHHhCCCceEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCC
Q 046326 269 DSVLFAVPGSG---GTLTAEQVTEMAWGLEQSKQRFIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAG 345 (476)
Q Consensus 269 ~~vvyvs~GS~---~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~ 345 (476)
++.|.|..|+. ..++.+.+.++++.|.+.+.++++.-++... +. ..-+.+.+.... ..
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~---------------e~--~~~~~i~~~~~~--~~ 243 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKD---------------DL--ACVNEIAQGCQT--PP 243 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChH---------------HH--HHHHHHHHhcCC--Cc
Confidence 34777787775 3667889999999998778887665332211 00 000111111111 11
Q ss_pred -eEeccc--cch-HHhhccCCccceecccCchHHHHHHhcCCcEeec
Q 046326 346 -MVVPSW--APQ-VHILRHPSTGGFLSHCGWNSTLESICHGVPMIAW 388 (476)
Q Consensus 346 -~~~~~~--~pq-~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 388 (476)
+-..+- +.+ ..++.++++ ||+.- .|-++=|.+.|+|.|++
T Consensus 244 ~~~l~g~~sL~el~ali~~a~l--~v~nD-SGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 244 VTALAGKTTFPELGALIDHAQL--FIGVD-SAPAHIAAAVNTPLICL 287 (352)
T ss_pred cccccCCCCHHHHHHHHHhCCE--EEecC-CHHHHHHHHcCCCEEEE
Confidence 222232 344 358889985 88874 47788888999999877
No 305
>PRK00771 signal recognition particle protein Srp54; Provisional
Probab=34.51 E-value=3.4e+02 Score=27.62 Aligned_cols=39 Identities=13% Similarity=0.214 Sum_probs=33.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 7 QPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 7 ~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
+..|+|+-.++.|-..-...||..|.++| +.|.++..++
T Consensus 95 p~vI~lvG~~GsGKTTtaakLA~~L~~~g-~kV~lV~~D~ 133 (437)
T PRK00771 95 PQTIMLVGLQGSGKTTTAAKLARYFKKKG-LKVGLVAADT 133 (437)
T ss_pred CeEEEEECCCCCcHHHHHHHHHHHHHHcC-CeEEEecCCC
Confidence 34567777789999999999999999999 9999998775
No 306
>cd01985 ETF The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=34.26 E-value=3.1e+02 Score=23.70 Aligned_cols=39 Identities=21% Similarity=0.316 Sum_probs=28.3
Q ss_pred HHHHHHHhcCCCCEEEECCCcc---hHHHHHHHcCCCeEEEec
Q 046326 99 SLKSVLTELCNPNALVIDLFCT---QAFEICSQLSIPTYSFVT 138 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~~~---~~~~~A~~lgIP~v~~~~ 138 (476)
.+.+++++. +||+|+...... .+..+|.++|.|++.=+.
T Consensus 82 ~l~~~i~~~-~p~~Vl~g~t~~g~~la~rlA~~L~~~~vsdv~ 123 (181)
T cd01985 82 ALAALIKKE-KPDLILAGATSIGKQLAPRVAALLGVPQISDVT 123 (181)
T ss_pred HHHHHHHHh-CCCEEEECCcccccCHHHHHHHHhCCCcceeEE
Confidence 566677777 999999755443 345589999999887443
No 307
>PRK06067 flagellar accessory protein FlaH; Validated
Probab=34.20 E-value=1.4e+02 Score=27.16 Aligned_cols=36 Identities=11% Similarity=0.133 Sum_probs=30.0
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
+++.-.|+.|--.-..+++....++| ..|.+++.+.
T Consensus 28 ~~i~G~~GsGKt~l~~~~~~~~~~~g-~~~~y~~~e~ 63 (234)
T PRK06067 28 ILIEGDHGTGKSVLSQQFVYGALKQG-KKVYVITTEN 63 (234)
T ss_pred EEEECCCCCChHHHHHHHHHHHHhCC-CEEEEEEcCC
Confidence 45556678999999999988887888 9999999875
No 308
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=34.01 E-value=2.9e+02 Score=23.37 Aligned_cols=138 Identities=16% Similarity=0.193 Sum_probs=65.4
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEEecCCCCCccccccccCCCCCCCCCCCChhHHHhhhcCCCCeEeccc
Q 046326 272 LFAVPGSGGTLTAEQVTEMAWGLEQSKQRFIWVVRMPSDASASATFFNVGSDVNDPKAYLPEGFLQRTRAQGAGMVVPSW 351 (476)
Q Consensus 272 vyvs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~ 351 (476)
|-|-+||.. +....+++...|+..+..+-..+-+.. -.|+.+.+..+
T Consensus 3 V~Ii~gs~S--D~~~~~~a~~~L~~~gi~~~~~V~saH--------------------R~p~~l~~~~~----------- 49 (150)
T PF00731_consen 3 VAIIMGSTS--DLPIAEEAAKTLEEFGIPYEVRVASAH--------------------RTPERLLEFVK----------- 49 (150)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTT-EEEEEE--TT--------------------TSHHHHHHHHH-----------
T ss_pred EEEEeCCHH--HHHHHHHHHHHHHHcCCCEEEEEEecc--------------------CCHHHHHHHHH-----------
Confidence 555567664 556778888889998876655443321 13433322211
Q ss_pred cchHHhhccCCccceecccCc----hHHHHHHhcCCcEeeccccchhhhhhh----hhcceeeeeEEeccccCCCCCcCH
Q 046326 352 APQVHILRHPSTGGFLSHCGW----NSTLESICHGVPMIAWPLYAEQRMNAA----MLTAEETGVAVKPETEPGKKVIGR 423 (476)
Q Consensus 352 ~pq~~iL~~~~~~~~I~HgG~----~s~~eal~~GvP~l~~P~~~DQ~~na~----~~~~~~~G~G~~l~~~~~~~~~~~ 423 (476)
...- ..++ .||.=.|. .++.-++. -.|+|.+|...++..... .+ ..-.|+++..-. -++..++
T Consensus 50 --~~~~-~~~~--viIa~AG~~a~Lpgvva~~t-~~PVIgvP~~~~~~~g~d~l~S~v-qMp~g~pvatv~--i~~~~nA 120 (150)
T PF00731_consen 50 --EYEA-RGAD--VIIAVAGMSAALPGVVASLT-TLPVIGVPVSSGYLGGLDSLLSIV-QMPSGVPVATVG--INNGFNA 120 (150)
T ss_dssp --HTTT-TTES--EEEEEEESS--HHHHHHHHS-SS-EEEEEE-STTTTTHHHHHHHH-T--TTS--EE-S--STHHHHH
T ss_pred --Hhcc-CCCE--EEEEECCCcccchhhheecc-CCCEEEeecCcccccCcccHHHHH-hccCCCCceEEE--ccCchHH
Confidence 1100 1223 37766553 34444444 799999999766442211 11 122344432221 0022344
Q ss_pred HHHHHHHHHHhcCChhHHHHHHHHHHHHHHHH
Q 046326 424 EEIERVVRLVMEGEEGKVMRRRVQELKESASR 455 (476)
Q Consensus 424 ~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~ 455 (476)
.-++-.|-.+ .|++ ++++.+.++++.++
T Consensus 121 A~~A~~ILa~-~d~~---l~~kl~~~~~~~~~ 148 (150)
T PF00731_consen 121 ALLAARILAL-KDPE---LREKLRAYREKMKE 148 (150)
T ss_dssp HHHHHHHHHT-T-HH---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHhc-CCHH---HHHHHHHHHHHHHc
Confidence 4444433222 4555 88888888777664
No 309
>PRK11519 tyrosine kinase; Provisional
Probab=34.00 E-value=3.6e+02 Score=29.45 Aligned_cols=39 Identities=15% Similarity=0.245 Sum_probs=31.8
Q ss_pred CCEEEEEcC--CCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 7 QPHVAVLPS--PGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 7 ~~rIll~~~--p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
+.++++++. |+.|-..-...||..|+..| ++|.++-.+.
T Consensus 525 ~~kvi~vts~~~geGKTt~a~nLA~~la~~g-~rvLlID~Dl 565 (719)
T PRK11519 525 QNNVLMMTGVSPSIGKTFVCANLAAVISQTN-KRVLLIDCDM 565 (719)
T ss_pred CceEEEEECCCCCCCHHHHHHHHHHHHHhCC-CcEEEEeCCC
Confidence 446665555 78899999999999999999 9999987653
No 310
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=33.71 E-value=1.3e+02 Score=31.90 Aligned_cols=27 Identities=19% Similarity=0.297 Sum_probs=21.8
Q ss_pred ccceecccC------chHHHHHHhcCCcEeecc
Q 046326 363 TGGFLSHCG------WNSTLESICHGVPMIAWP 389 (476)
Q Consensus 363 ~~~~I~HgG------~~s~~eal~~GvP~l~~P 389 (476)
.+++++|.| .+.+++|.+.++|+|++-
T Consensus 64 ~gv~~~t~GPG~~n~l~~i~~A~~~~~Pvl~I~ 96 (586)
T PRK06276 64 VGVCVATSGPGATNLVTGIATAYADSSPVIALT 96 (586)
T ss_pred CEEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 335888877 458899999999999994
No 311
>PRK05920 aromatic acid decarboxylase; Validated
Probab=33.38 E-value=66 Score=28.83 Aligned_cols=39 Identities=10% Similarity=0.119 Sum_probs=31.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 6 LQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 6 ~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
+.+||++.-.|+.+= .=.+.+.+.|.+.| |+|.++.++.
T Consensus 2 ~~krIllgITGsiaa-~ka~~lvr~L~~~g-~~V~vi~T~~ 40 (204)
T PRK05920 2 KMKRIVLAITGASGA-IYGVRLLECLLAAD-YEVHLVISKA 40 (204)
T ss_pred CCCEEEEEEeCHHHH-HHHHHHHHHHHHCC-CEEEEEEChh
Confidence 457887776665554 67889999999999 9999998763
No 312
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=33.02 E-value=89 Score=29.59 Aligned_cols=29 Identities=14% Similarity=0.283 Sum_probs=23.7
Q ss_pred CCCHHHHHHHHHHHHhCCCceEEEEecCC
Q 046326 281 TLTAEQVTEMAWGLEQSKQRFIWVVRMPS 309 (476)
Q Consensus 281 ~~~~~~~~~~~~al~~~~~~~i~~~~~~~ 309 (476)
..+.+...++.+++....++.||..+++.
T Consensus 45 ~s~~~Ra~dL~~a~~d~~i~aI~~~rGG~ 73 (282)
T cd07025 45 GTDEERAADLNAAFADPEIKAIWCARGGY 73 (282)
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEcCCcC
Confidence 44556788899999999999999987753
No 313
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=32.89 E-value=54 Score=29.99 Aligned_cols=31 Identities=13% Similarity=0.141 Sum_probs=21.0
Q ss_pred EEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEcc
Q 046326 12 VLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVIT 45 (476)
Q Consensus 12 l~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~ 45 (476)
+++.++.|-+- .+||++|.++| |+|+++...
T Consensus 19 ~itN~SSG~iG--~aLA~~L~~~G-~~V~li~r~ 49 (229)
T PRK06732 19 GITNHSTGQLG--KIIAETFLAAG-HEVTLVTTK 49 (229)
T ss_pred eecCccchHHH--HHHHHHHHhCC-CEEEEEECc
Confidence 34444444332 57889999999 999998643
No 314
>PRK05748 replicative DNA helicase; Provisional
Probab=32.85 E-value=2.6e+02 Score=28.42 Aligned_cols=36 Identities=17% Similarity=0.318 Sum_probs=30.5
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHh-cCCcEEEEEEccC
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVL-NHGVHVSFLVITT 46 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~-rG~h~V~~~~~~~ 46 (476)
|++...|+.|-..=.+.++...+. .| +.|.|++.+-
T Consensus 206 ivIaarpg~GKT~~al~ia~~~a~~~g-~~v~~fSlEm 242 (448)
T PRK05748 206 IIVAARPSVGKTAFALNIAQNVATKTD-KNVAIFSLEM 242 (448)
T ss_pred EEEEeCCCCCchHHHHHHHHHHHHhCC-CeEEEEeCCC
Confidence 677777899999999999999864 58 8999998774
No 315
>TIGR02852 spore_dpaB dipicolinic acid synthetase, B subunit. Members of this family represent the B subunit of dipicolinic acid synthetase, an enzyme that synthesizes a small molecule that appears to confer heat stability to bacterial endospores such as those of Bacillus subtilis. The A and B subunits are together in what was originally designated the spoVF locus for stage V of endospore formation.
Probab=32.38 E-value=64 Score=28.46 Aligned_cols=38 Identities=16% Similarity=0.092 Sum_probs=31.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
+||++.-.|+.|=+.-.+.+.++|.+.| ++|+++.++.
T Consensus 1 ~~I~lgITGs~~a~~a~~~ll~~L~~~g-~~V~vI~S~~ 38 (187)
T TIGR02852 1 KRIGFGLTGSHCTLEAVMPQLEKLVDEG-AEVTPIVSET 38 (187)
T ss_pred CEEEEEEecHHHHHHHHHHHHHHHHhCc-CEEEEEEchh
Confidence 3677777777777777779999999999 9999988663
No 316
>PLN02939 transferase, transferring glycosyl groups
Probab=32.29 E-value=81 Score=35.27 Aligned_cols=39 Identities=18% Similarity=0.173 Sum_probs=30.3
Q ss_pred CCCCEEEEEcC--------CCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 5 SLQPHVAVLPS--------PGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 5 ~~~~rIll~~~--------p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
.++|||++++. |+.|+ -.-+|.++|++.| |+|.+++|.-
T Consensus 479 ~~~mkILfVasE~aP~aKtGGLaD--Vv~sLPkAL~~~G-hdV~VIlP~Y 525 (977)
T PLN02939 479 SSGLHIVHIAAEMAPVAKVGGLAD--VVSGLGKALQKKG-HLVEIVLPKY 525 (977)
T ss_pred CCCCEEEEEEcccccccccccHHH--HHHHHHHHHHHcC-CeEEEEeCCC
Confidence 56899999875 23333 3457999999999 9999999864
No 317
>cd00672 CysRS_core catalytic core domain of cysteinyl tRNA synthetase. Cysteinyl tRNA synthetase (CysRS) catalytic core domain. This class I enzyme is a monomer which aminoacylates the 2'-OH of the nucleotide at the 3' of the appropriate tRNA. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding.
Probab=32.05 E-value=3.6e+02 Score=24.24 Aligned_cols=91 Identities=9% Similarity=0.014 Sum_probs=54.1
Q ss_pred CCccCHHHHHH---HHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHHHHH
Q 046326 16 PGLGHLIPLLE---FAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLHAIV 92 (476)
Q Consensus 16 p~~GHi~P~l~---La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (476)
+=.||+.+++. |++.|+.+| ++|.+++..+....+......+. +. +. ....
T Consensus 34 ~HiGH~r~~v~~Dvl~R~lr~~G-~~V~~~~g~dd~g~ki~~~A~~~----------------g~-----~p----~e~~ 87 (213)
T cd00672 34 AHIGHARTYVVFDVLRRYLEDLG-YKVRYVQNITDIDDKIIKRAREE----------------GL-----SW----KEVA 87 (213)
T ss_pred cccccchhHHHHHHHHHHHHhcC-CeeEEEeecCCCCCHHHHHHHHc----------------CC-----CH----HHHH
Confidence 34599998874 688888899 99999998874444444333111 11 11 1222
Q ss_pred HHhhcHHHHHHHHhcC--CCCEEEECCCcchHHHHHHHcCCCe
Q 046326 93 EESLSKSLKSVLTELC--NPNALVIDLFCTQAFEICSQLSIPT 133 (476)
Q Consensus 93 ~~~~~~~l~~~l~~~~--~pDlVI~D~~~~~~~~~A~~lgIP~ 133 (476)
..... .+++.++.++ .||..+---..-|+..+.+.+|-|.
T Consensus 88 ~~~~~-~f~~~~~~l~i~~~d~~~rtWh~ec~am~~~~lg~~~ 129 (213)
T cd00672 88 DYYTK-EFFEDMKALNVLPPDVVPRVWHIECSAMAMKYLGETF 129 (213)
T ss_pred HHHHH-HHHHHHHHcCCCCCCcceeehhHHHHHHHHHHcCCCc
Confidence 33334 6677777774 3476664444455555667777553
No 318
>PF09334 tRNA-synt_1g: tRNA synthetases class I (M); InterPro: IPR015413 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This domain is found in methionyl and leucyl tRNA synthetases. ; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 2D5B_A 1A8H_A 1WOY_A 2D54_A 4DLP_A 2CT8_B 2CSX_A 1MED_A 1PFU_A 1PFW_A ....
Probab=31.97 E-value=45 Score=33.34 Aligned_cols=33 Identities=39% Similarity=0.505 Sum_probs=25.1
Q ss_pred ccCHHHHH---HHHHHHHhcCCcEEEEEEccCCcchh
Q 046326 18 LGHLIPLL---EFAKRLVLNHGVHVSFLVITTNEASA 51 (476)
Q Consensus 18 ~GHi~P~l---~La~~L~~rG~h~V~~~~~~~~~~~~ 51 (476)
.||+.|++ .+++.++.+| |+|.+++..+....+
T Consensus 16 lGH~~~~l~ADv~aR~~r~~G-~~v~~~tGtDehG~~ 51 (391)
T PF09334_consen 16 LGHLYPYLAADVLARYLRLRG-HDVLFVTGTDEHGSK 51 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT--EEEEEEEEE-SSHH
T ss_pred CChhHHHHHHHHHHHHHhhcc-cceeeEEecchhhHH
Confidence 49999887 5788889999 999999988644333
No 319
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=31.78 E-value=4.4e+02 Score=24.94 Aligned_cols=25 Identities=24% Similarity=0.230 Sum_probs=19.5
Q ss_pred HHHHHHHhcCCcEEEEEEccCCcchh
Q 046326 26 EFAKRLVLNHGVHVSFLVITTNEASA 51 (476)
Q Consensus 26 ~La~~L~~rG~h~V~~~~~~~~~~~~ 51 (476)
+|..+|.+.| |+|++++-..+.+..
T Consensus 13 ~L~~~L~~~g-h~v~iltR~~~~~~~ 37 (297)
T COG1090 13 ALTARLRKGG-HQVTILTRRPPKASQ 37 (297)
T ss_pred HHHHHHHhCC-CeEEEEEcCCcchhh
Confidence 6788899998 999999976644443
No 320
>PF13167 GTP-bdg_N: GTP-binding GTPase N-terminal
Probab=31.73 E-value=1.1e+02 Score=23.63 Aligned_cols=35 Identities=17% Similarity=0.305 Sum_probs=27.8
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHH--HHHHcCCCeE
Q 046326 99 SLKSVLTELCNPNALVIDLFCTQAFE--ICSQLSIPTY 134 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~~~~~~~--~A~~lgIP~v 134 (476)
.++++++.. ++|+||.|.-..+... +.+.+|++++
T Consensus 48 ei~~~~~~~-~~d~vvfd~~Lsp~Q~rNLe~~~~~~V~ 84 (95)
T PF13167_consen 48 EIKELIEEL-DADLVVFDNELSPSQQRNLEKALGVKVI 84 (95)
T ss_pred HHHHHHhhc-CCCEEEECCCCCHHHHHHHHHHHCCeee
Confidence 577777777 9999999877666654 8888998875
No 321
>PRK08322 acetolactate synthase; Reviewed
Probab=31.54 E-value=1.5e+02 Score=31.11 Aligned_cols=27 Identities=30% Similarity=0.326 Sum_probs=22.0
Q ss_pred ccceecccCc------hHHHHHHhcCCcEeecc
Q 046326 363 TGGFLSHCGW------NSTLESICHGVPMIAWP 389 (476)
Q Consensus 363 ~~~~I~HgG~------~s~~eal~~GvP~l~~P 389 (476)
.+++++|.|- +.+.+|...++|+|++.
T Consensus 64 ~gv~~~t~GpG~~N~~~~i~~A~~~~~Pll~i~ 96 (547)
T PRK08322 64 AGVCLSTLGPGATNLVTGVAYAQLGGMPMVAIT 96 (547)
T ss_pred CEEEEECCCccHhHHHHHHHHHhhcCCCEEEEe
Confidence 4458888774 48899999999999985
No 322
>PRK06932 glycerate dehydrogenase; Provisional
Probab=31.53 E-value=1.3e+02 Score=29.12 Aligned_cols=28 Identities=14% Similarity=0.124 Sum_probs=21.2
Q ss_pred CcEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEE
Q 046326 269 DSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQRFIW 303 (476)
Q Consensus 269 ~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~i~ 303 (476)
+.+..|++|+++ +++++.++..|.+++.
T Consensus 148 ktvgIiG~G~IG-------~~va~~l~~fg~~V~~ 175 (314)
T PRK06932 148 STLGVFGKGCLG-------TEVGRLAQALGMKVLY 175 (314)
T ss_pred CEEEEECCCHHH-------HHHHHHHhcCCCEEEE
Confidence 448899999987 5566667777888764
No 323
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=31.46 E-value=36 Score=28.96 Aligned_cols=31 Identities=23% Similarity=0.210 Sum_probs=25.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEcc
Q 046326 9 HVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVIT 45 (476)
Q Consensus 9 rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~ 45 (476)
+|.++-.|..|+ ++|..|+.+| |+|++...+
T Consensus 1 KI~ViGaG~~G~-----AlA~~la~~g-~~V~l~~~~ 31 (157)
T PF01210_consen 1 KIAVIGAGNWGT-----ALAALLADNG-HEVTLWGRD 31 (157)
T ss_dssp EEEEESSSHHHH-----HHHHHHHHCT-EEEEEETSC
T ss_pred CEEEECcCHHHH-----HHHHHHHHcC-CEEEEEecc
Confidence 466777777765 8999999999 999999865
No 324
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=31.17 E-value=5.7e+02 Score=25.85 Aligned_cols=39 Identities=18% Similarity=0.296 Sum_probs=34.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 7 QPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 7 ~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
+..|+|+-.++.|-..-...||..|..+| +.|.+++.++
T Consensus 241 ~~vI~LVGptGvGKTTTiaKLA~~L~~~G-kkVglI~aDt 279 (436)
T PRK11889 241 VQTIALIGPTGVGKTTTLAKMAWQFHGKK-KTVGFITTDH 279 (436)
T ss_pred CcEEEEECCCCCcHHHHHHHHHHHHHHcC-CcEEEEecCC
Confidence 45678888889999999999999999998 9999998876
No 325
>PRK00090 bioD dithiobiotin synthetase; Reviewed
Probab=31.01 E-value=3.7e+02 Score=23.98 Aligned_cols=33 Identities=15% Similarity=0.083 Sum_probs=25.9
Q ss_pred EEEE-cCCCccCHHHHHHHHHHHHhcCCcEEEEEE
Q 046326 10 VAVL-PSPGLGHLIPLLEFAKRLVLNHGVHVSFLV 43 (476)
Q Consensus 10 Ill~-~~p~~GHi~P~l~La~~L~~rG~h~V~~~~ 43 (476)
|.+. +-...|-..-.+.|++.|+++| ++|.+.=
T Consensus 2 i~I~~t~t~~GKT~vs~~L~~~l~~~g-~~v~~~K 35 (222)
T PRK00090 2 LFVTGTDTDVGKTVVTAALAQALREAG-YSVAGYK 35 (222)
T ss_pred EEEEeCCCCcCHHHHHHHHHHHHHHcC-CceEEEe
Confidence 3444 3356799999999999999999 8887754
No 326
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=30.89 E-value=1.6e+02 Score=25.82 Aligned_cols=26 Identities=15% Similarity=-0.009 Sum_probs=21.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcC
Q 046326 9 HVAVLPSPGLGHLIPLLEFAKRLVLNH 35 (476)
Q Consensus 9 rIll~~~p~~GHi~P~l~La~~L~~rG 35 (476)
+++ +-.|+.||.-=|+.|-+.|.++-
T Consensus 40 ~~l-VvlGSGGHT~EMlrLl~~l~~~y 65 (211)
T KOG3339|consen 40 STL-VVLGSGGHTGEMLRLLEALQDLY 65 (211)
T ss_pred eEE-EEEcCCCcHHHHHHHHHHHHhhc
Confidence 444 44689999999999999998764
No 327
>cd01423 MGS_CPS_I_III Methylglyoxal synthase-like domain found in pyr1 and URA1-like carbamoyl phosphate synthetases (CPS), including ammonia-dependent CPS Type I, and glutamine-dependent CPS Type III. These are multidomain proteins, in which MGS is the C-terminal domain.
Probab=30.76 E-value=2.7e+02 Score=22.00 Aligned_cols=94 Identities=15% Similarity=0.080 Sum_probs=52.8
Q ss_pred EEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHHHH
Q 046326 12 VLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLHAI 91 (476)
Q Consensus 12 l~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (476)
+++.... +=.=++.+++.|.+.| .++. ++..+ .+..... ++.+..+... .+. ....
T Consensus 4 lisv~~~-dk~~~~~~a~~l~~~G-~~i~-aT~gT-------a~~L~~~--gi~~~~v~~~--~~~-~~~~--------- 59 (116)
T cd01423 4 LISIGSY-SKPELLPTAQKLSKLG-YKLY-ATEGT-------ADFLLEN--GIPVTPVAWP--SEE-PQND--------- 59 (116)
T ss_pred EEecCcc-cchhHHHHHHHHHHCC-CEEE-EccHH-------HHHHHHc--CCCceEeeec--cCC-CCCC---------
Confidence 3444333 4556889999999999 6663 33321 1222222 5655554321 110 0000
Q ss_pred HHHhhcHHHHHHHHhcCCCCEEEECCC---------cchHHHHHHHcCCCeEE
Q 046326 92 VEESLSKSLKSVLTELCNPNALVIDLF---------CTQAFEICSQLSIPTYS 135 (476)
Q Consensus 92 ~~~~~~~~l~~~l~~~~~pDlVI~D~~---------~~~~~~~A~~lgIP~v~ 135 (476)
.+ .+.+++++- ++|+||.-+. .+.-...|-.+|||+++
T Consensus 60 ----~~-~i~~~i~~~-~idlVIn~~~~~~~~~~~~~~~iRr~Av~~~ip~iT 106 (116)
T cd01423 60 ----KP-SLRELLAEG-KIDLVINLPSNRGKRVLDNDYVMRRAADDFAVPLIT 106 (116)
T ss_pred ----ch-hHHHHHHcC-CceEEEECCCCCCCccccCcEeeehhhHhhCCcccc
Confidence 13 567777776 9999997322 23344588899999873
No 328
>PRK00784 cobyric acid synthase; Provisional
Probab=30.50 E-value=5.3e+02 Score=26.65 Aligned_cols=35 Identities=11% Similarity=0.065 Sum_probs=27.1
Q ss_pred EEEEEcC-CCccCHHHHHHHHHHHHhcCCcEEEEEEc
Q 046326 9 HVAVLPS-PGLGHLIPLLEFAKRLVLNHGVHVSFLVI 44 (476)
Q Consensus 9 rIll~~~-p~~GHi~P~l~La~~L~~rG~h~V~~~~~ 44 (476)
+|++... ..-|-..-...|++.|+++| ++|...=+
T Consensus 4 ~ifItGT~T~vGKT~vt~~L~~~l~~~G-~~v~~~Kp 39 (488)
T PRK00784 4 ALMVQGTASDAGKSTLVAGLCRILARRG-YRVAPFKA 39 (488)
T ss_pred eEEEEeCCCCCcHHHHHHHHHHHHHHCC-CeEecccc
Confidence 4555544 45799999999999999999 88876533
No 329
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=30.38 E-value=55 Score=35.77 Aligned_cols=111 Identities=16% Similarity=0.112 Sum_probs=61.2
Q ss_pred EeccccchHH---hhccCCccceecc--cCc-hHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCC
Q 046326 347 VVPSWAPQVH---ILRHPSTGGFLSH--CGW-NSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKV 420 (476)
Q Consensus 347 ~~~~~~pq~~---iL~~~~~~~~I~H--gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~ 420 (476)
...+++++.+ ++..+++ ++++- -|. .++.|++++|+|-..+|+..+----+..+ .-|+.++.
T Consensus 345 ~~~~~~~~~~l~~ly~~aDv-~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l-----~~~llv~P------ 412 (726)
T PRK14501 345 YFYRSLPFEELVALYRAADV-ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL-----AEALLVNP------ 412 (726)
T ss_pred EEeCCCCHHHHHHHHHhccE-EEecccccccCcccceEEEEcCCCCceEEEecccchhHHh-----CcCeEECC------
Confidence 3446677654 6667776 33332 355 47889999977632222222211112222 12566655
Q ss_pred cCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHhh
Q 046326 421 IGREEIERVVRLVMEGEEGKVMRRRVQELKESASRELGDGGSSSDSLASFIKKCK 475 (476)
Q Consensus 421 ~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 475 (476)
.+.++++++|.++++.+.. ..+++.+++.+.++ .-+...-++++++.+.
T Consensus 413 ~d~~~la~ai~~~l~~~~~-e~~~r~~~~~~~v~-----~~~~~~w~~~~l~~l~ 461 (726)
T PRK14501 413 NDIEGIAAAIKRALEMPEE-EQRERMQAMQERLR-----RYDVHKWASDFLDELR 461 (726)
T ss_pred CCHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHH
Confidence 5689999999999986531 13333444333332 3455566666666553
No 330
>cd01124 KaiC KaiC is a circadian clock protein primarily found in cyanobacteria KaiC is a RecA-like ATPase, having both Walker A and Walker B motifs. A related protein is found in archaea.
Probab=30.29 E-value=1.6e+02 Score=25.25 Aligned_cols=36 Identities=14% Similarity=0.146 Sum_probs=30.9
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
+++.-.|+.|=..=.+.++.+..+.| ..|.+++.+.
T Consensus 2 ~li~G~~G~GKT~l~~~~~~~~~~~g-~~v~~~s~e~ 37 (187)
T cd01124 2 TLLSGGPGTGKTTFALQFLYAGLARG-EPGLYVTLEE 37 (187)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHHCC-CcEEEEECCC
Confidence 56677788999999999999999998 9999998875
No 331
>PRK07004 replicative DNA helicase; Provisional
Probab=30.06 E-value=5e+02 Score=26.58 Aligned_cols=36 Identities=11% Similarity=0.245 Sum_probs=30.2
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHh-cCCcEEEEEEccC
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVL-NHGVHVSFLVITT 46 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~-rG~h~V~~~~~~~ 46 (476)
|++..-|+.|-..=++.+|..++. .| +.|.|++.+-
T Consensus 216 iviaarpg~GKT~~al~ia~~~a~~~~-~~v~~fSlEM 252 (460)
T PRK07004 216 IIVAGRPSMGKTAFSMNIGEYVAVEYG-LPVAVFSMEM 252 (460)
T ss_pred EEEEeCCCCCccHHHHHHHHHHHHHcC-CeEEEEeCCC
Confidence 566777999999999999998864 57 8899998774
No 332
>COG3195 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.96 E-value=1.6e+02 Score=25.20 Aligned_cols=93 Identities=17% Similarity=0.201 Sum_probs=58.8
Q ss_pred chHHhh-ccCCccceecccC---chHHHHHHhcCCcEeeccccc--hhhhhhhhhcceeeeeEEeccccCCCCCcCHHHH
Q 046326 353 PQVHIL-RHPSTGGFLSHCG---WNSTLESICHGVPMIAWPLYA--EQRMNAAMLTAEETGVAVKPETEPGKKVIGREEI 426 (476)
Q Consensus 353 pq~~iL-~~~~~~~~I~HgG---~~s~~eal~~GvP~l~~P~~~--DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l 426 (476)
+|..++ .||++++-+--.| .-|+.|--.+|.=-+.= .-. =+..|+++. ++.|.=..+.- +..|.++|
T Consensus 64 ~rl~liraHPdLAgk~a~a~elta~S~~EQasAGLd~Ls~-~E~a~f~~LN~aY~--~rFgfPfI~aV----kg~~k~~I 136 (176)
T COG3195 64 ERLALIRAHPDLAGKAAIAGELTAESTSEQASAGLDRLSP-EEFARFTELNAAYV--ERFGFPFIIAV----KGNTKDTI 136 (176)
T ss_pred HHHHHHHhChhhHHHHHHHHHhhhhhHHHHHhcCcccCCH-HHHHHHHHHHHHHH--HhcCCceEEee----cCCCHHHH
Confidence 455433 4777643333222 35677777776544321 111 156799999 99999877766 56789999
Q ss_pred HHHHHHHhcCChhHHHHHHHHHHHHH
Q 046326 427 ERVVRLVMEGEEGKVMRRRVQELKES 452 (476)
Q Consensus 427 ~~ai~~~l~~~~~~~~~~~a~~l~~~ 452 (476)
.++..+-|.|++...++....++.+.
T Consensus 137 l~a~~~Rl~n~~e~E~~tAl~eI~rI 162 (176)
T COG3195 137 LAAFERRLDNDREQEFATALAEIERI 162 (176)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 99998888888744565555555443
No 333
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=29.79 E-value=4e+02 Score=26.00 Aligned_cols=31 Identities=23% Similarity=0.324 Sum_probs=24.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCc-EEEEE
Q 046326 6 LQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGV-HVSFL 42 (476)
Q Consensus 6 ~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h-~V~~~ 42 (476)
++.||+++-.++.| -.+|+.|+..| + +++++
T Consensus 23 ~~~~VlIiG~GglG-----s~va~~La~aG-vg~i~lv 54 (338)
T PRK12475 23 REKHVLIVGAGALG-----AANAEALVRAG-IGKLTIA 54 (338)
T ss_pred cCCcEEEECCCHHH-----HHHHHHHHHcC-CCEEEEE
Confidence 45689999888877 68899999999 6 55555
No 334
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=29.54 E-value=3.4e+02 Score=25.95 Aligned_cols=54 Identities=20% Similarity=0.164 Sum_probs=37.8
Q ss_pred cCCccceecccCchHHHHHHhc----CCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhc
Q 046326 360 HPSTGGFLSHCGWNSTLESICH----GVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVME 435 (476)
Q Consensus 360 ~~~~~~~I~HgG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~ 435 (476)
.++ .+|+=||-||+.+++.. ++|++++.. -++ |.- -.++.+++.++|.++++
T Consensus 62 ~~d--~vi~~GGDGt~l~~~~~~~~~~~Pvlgin~--------G~l-------GFl-------~~~~~~~~~~~l~~~~~ 117 (295)
T PRK01231 62 VCD--LVIVVGGDGSLLGAARALARHNVPVLGINR--------GRL-------GFL-------TDIRPDELEFKLAEVLD 117 (295)
T ss_pred CCC--EEEEEeCcHHHHHHHHHhcCCCCCEEEEeC--------Ccc-------ccc-------ccCCHHHHHHHHHHHHc
Confidence 355 49999999999999753 567776643 112 211 24678999999999987
Q ss_pred CC
Q 046326 436 GE 437 (476)
Q Consensus 436 ~~ 437 (476)
++
T Consensus 118 g~ 119 (295)
T PRK01231 118 GH 119 (295)
T ss_pred CC
Confidence 54
No 335
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=29.49 E-value=48 Score=30.64 Aligned_cols=22 Identities=14% Similarity=0.086 Sum_probs=17.5
Q ss_pred HHHHHHHHHhcCCcEEEEEEccC
Q 046326 24 LLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 24 ~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
.-.|+++|+++| |+|++++|.-
T Consensus 22 ~~~L~kaL~~~G-~~V~Vi~P~y 43 (245)
T PF08323_consen 22 VGSLPKALAKQG-HDVRVIMPKY 43 (245)
T ss_dssp HHHHHHHHHHTT--EEEEEEE-T
T ss_pred HHHHHHHHHhcC-CeEEEEEccc
Confidence 457899999999 9999999874
No 336
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=29.31 E-value=3.8e+02 Score=23.30 Aligned_cols=75 Identities=13% Similarity=0.171 Sum_probs=44.4
Q ss_pred HHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHHHHHHHhhcHHHHHH
Q 046326 24 LLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLHAIVEESLSKSLKSV 103 (476)
Q Consensus 24 ~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 103 (476)
+..|.+...++| +.|.++...+.......+...+.+| ++.+... . +.+. ....+ .+.+.
T Consensus 37 ~~~l~~~~~~~~-~~vfllG~~~~v~~~~~~~l~~~yP-~l~i~g~-~----g~f~-------------~~~~~-~i~~~ 95 (177)
T TIGR00696 37 MEELCQRAGKEK-LPIFLYGGKPDVLQQLKVKLIKEYP-KLKIVGA-F----GPLE-------------PEERK-AALAK 95 (177)
T ss_pred HHHHHHHHHHcC-CeEEEECCCHHHHHHHHHHHHHHCC-CCEEEEE-C----CCCC-------------hHHHH-HHHHH
Confidence 345566666777 8999987765444444555556677 8887765 1 2100 00112 34455
Q ss_pred HHhcCCCCEEEECCCcc
Q 046326 104 LTELCNPNALVIDLFCT 120 (476)
Q Consensus 104 l~~~~~pDlVI~D~~~~ 120 (476)
|.+. +||+|++..-++
T Consensus 96 I~~s-~~dil~VglG~P 111 (177)
T TIGR00696 96 IARS-GAGIVFVGLGCP 111 (177)
T ss_pred HHHc-CCCEEEEEcCCc
Confidence 5556 999999875444
No 337
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=29.28 E-value=4.4e+02 Score=25.53 Aligned_cols=100 Identities=15% Similarity=0.305 Sum_probs=59.4
Q ss_pred CEEEEEcCCCcc-----CHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCC
Q 046326 8 PHVAVLPSPGLG-----HLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDM 82 (476)
Q Consensus 8 ~rIll~~~p~~G-----Hi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (476)
..|++.|..+.| -..=+..|++.|.++| ..|.+..+. .+...........+.... + ....
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~-~~Vvl~g~~--~e~e~~~~i~~~~~~~~~-----------l-~~k~ 240 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIAKG-YQVVLFGGP--DEEERAEEIAKGLPNAVI-----------L-AGKT 240 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHHCC-CEEEEecCh--HHHHHHHHHHHhcCCccc-----------c-CCCC
Confidence 566777662332 3446889999999998 888887755 333333333333320000 1 0000
Q ss_pred chHHHHHHHHHHhhcHHHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEeccc
Q 046326 83 PVVTRLHAIVEESLSKSLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFVTTS 140 (476)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~~~ 140 (476)
+ .. .+..+++ +.|++|+.- .+...+|..+|.|+|.+....
T Consensus 241 s------------L~-e~~~li~---~a~l~I~~D--Sg~~HlAaA~~~P~I~iyg~t 280 (334)
T COG0859 241 S------------LE-ELAALIA---GADLVIGND--SGPMHLAAALGTPTIALYGPT 280 (334)
T ss_pred C------------HH-HHHHHHh---cCCEEEccC--ChHHHHHHHcCCCEEEEECCC
Confidence 1 11 4445554 679999643 356679999999999988644
No 338
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=29.28 E-value=4.6e+02 Score=24.22 Aligned_cols=36 Identities=17% Similarity=0.139 Sum_probs=30.1
Q ss_pred EEEEEcC-CCccCHHHHHHHHHHHHhcCCcEEEEEEcc
Q 046326 9 HVAVLPS-PGLGHLIPLLEFAKRLVLNHGVHVSFLVIT 45 (476)
Q Consensus 9 rIll~~~-p~~GHi~P~l~La~~L~~rG~h~V~~~~~~ 45 (476)
+|+|.+. |+-|=..=.-+||..|++.| +.|..+=..
T Consensus 3 ~iai~s~kGGvG~TTltAnLA~aL~~~G-~~VlaID~d 39 (243)
T PF06564_consen 3 VIAIVSPKGGVGKTTLTANLAWALARLG-ESVLAIDLD 39 (243)
T ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHCC-CcEEEEeCC
Confidence 4555555 78899999999999999999 999887655
No 339
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=29.18 E-value=3.1e+02 Score=26.35 Aligned_cols=28 Identities=14% Similarity=0.016 Sum_probs=21.4
Q ss_pred CcEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEE
Q 046326 269 DSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQRFIW 303 (476)
Q Consensus 269 ~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~i~ 303 (476)
+.+..|++|+++ +.+++-+...|.+++.
T Consensus 137 ~tvgIvG~G~IG-------~~vA~~l~afG~~V~~ 164 (312)
T PRK15469 137 FTIGILGAGVLG-------SKVAQSLQTWGFPLRC 164 (312)
T ss_pred CEEEEECCCHHH-------HHHHHHHHHCCCEEEE
Confidence 348899999997 5577777778888754
No 340
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=29.04 E-value=77 Score=27.82 Aligned_cols=37 Identities=11% Similarity=0.171 Sum_probs=30.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
+||++.-.|+.|=+. ...+.+.|+++| ++|.++.++.
T Consensus 2 k~Ill~vtGsiaa~~-~~~li~~L~~~g-~~V~vv~T~~ 38 (182)
T PRK07313 2 KNILLAVSGSIAAYK-AADLTSQLTKRG-YQVTVLMTKA 38 (182)
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHHCC-CEEEEEEChh
Confidence 478888777777665 789999999999 9999988664
No 341
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=28.93 E-value=1.7e+02 Score=23.90 Aligned_cols=23 Identities=4% Similarity=-0.012 Sum_probs=18.8
Q ss_pred HHHHHHHHHHhcCCcEEEEEEccC
Q 046326 23 PLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 23 P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
..+...++|++.| |.|.++|...
T Consensus 28 ~~ie~L~~l~~~G-~~IiiaTGR~ 50 (126)
T TIGR01689 28 AVIEKLRHYKALG-FEIVISSSRN 50 (126)
T ss_pred HHHHHHHHHHHCC-CEEEEECCCC
Confidence 5666777778999 9999999876
No 342
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=28.90 E-value=1.2e+02 Score=28.89 Aligned_cols=55 Identities=16% Similarity=0.164 Sum_probs=37.2
Q ss_pred ccCCccceecccCchHHHHHHh----cCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHh
Q 046326 359 RHPSTGGFLSHCGWNSTLESIC----HGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVM 434 (476)
Q Consensus 359 ~~~~~~~~I~HgG~~s~~eal~----~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l 434 (476)
..+++ +|+-||-||+..++. +++|++++ |.-++ |.- -.++.+++.+++.+++
T Consensus 63 ~~~Dl--vi~iGGDGT~L~aa~~~~~~~~PilGI--------N~G~l-------GFL-------t~~~~~~~~~~l~~i~ 118 (287)
T PRK14077 63 KISDF--LISLGGDGTLISLCRKAAEYDKFVLGI--------HAGHL-------GFL-------TDITVDEAEKFFQAFF 118 (287)
T ss_pred cCCCE--EEEECCCHHHHHHHHHhcCCCCcEEEE--------eCCCc-------ccC-------CcCCHHHHHHHHHHHH
Confidence 45664 999999999998866 36787776 22222 211 2466788888888887
Q ss_pred cCC
Q 046326 435 EGE 437 (476)
Q Consensus 435 ~~~ 437 (476)
+++
T Consensus 119 ~g~ 121 (287)
T PRK14077 119 QGE 121 (287)
T ss_pred cCC
Confidence 754
No 343
>cd01976 Nitrogenase_MoFe_alpha Nitrogenase_MoFe_alpha_II: Nitrogenase MoFe protein, beta subunit. A group of proteins similar to the alpha subunit of the MoFe protein of the molybdenum (Mo-) nitrogenase. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Mo-nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=28.88 E-value=72 Score=32.22 Aligned_cols=35 Identities=14% Similarity=0.262 Sum_probs=27.9
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEe
Q 046326 99 SLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFV 137 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~ 137 (476)
.+.+++++. +||++|.... ...+|+++|||+..+.
T Consensus 360 e~~~~i~~~-~pDliig~~~---~~~~a~k~giP~~~~~ 394 (421)
T cd01976 360 ELEEFVKRL-KPDLIGSGIK---EKYVFQKMGIPFRQMH 394 (421)
T ss_pred HHHHHHHHh-CCCEEEecCc---chhhhhhcCCCeEeCC
Confidence 566777777 9999998874 5568999999997654
No 344
>PF01497 Peripla_BP_2: Periplasmic binding protein; InterPro: IPR002491 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). Most bacterial importers employ a periplasmic substrate-binding protein (PBP) that delivers the ligand to the extracellular gate of the TM domains. These proteins bind their substrates selectively and with high affinity, which is thought to ensure the specificity of the transport reaction. Binding proteins in Gram-negative bacteria are present within the periplasm, whereas those in Gram-positive bacteria are tethered to the cell membrane via the acylation of a cysteine residue that is an integral component of a lipoprotein signal sequence. In planta expression of a high-affinity iron-uptake system involving the siderophore chrysobactin in Erwinia chrysanthemi 3937 contributes greatly to invasive growth of this pathogen on its natural host, African violets []. The cobalamin (vitamin B12) and the iron transport systems share many common attributes and probably evolved from the same origin [, ]. The periplasmic-binding domain is composed of two subdomains, each consisting of a central beta-sheet and surrounding alpha-helices, linked by a rigid alpha-helix. The substrate binding site is located in a cleft between the two alpha/beta subdomains [].; GO: 0005488 binding; PDB: 2X4L_A 1N4A_B 1N2Z_B 1N4D_B 4DBL_J 2QI9_F 3EIW_A 3EIX_A 3MWG_A 3MWF_A ....
Probab=28.83 E-value=78 Score=28.58 Aligned_cols=37 Identities=22% Similarity=0.389 Sum_probs=24.8
Q ss_pred HHHhcCCCCEEEECCCc--chHHHHHHHcCCCeEEEeccc
Q 046326 103 VLTELCNPNALVIDLFC--TQAFEICSQLSIPTYSFVTTS 140 (476)
Q Consensus 103 ~l~~~~~pDlVI~D~~~--~~~~~~A~~lgIP~v~~~~~~ 140 (476)
.+..+ +||+||..... .....-....+||++.+....
T Consensus 55 ~i~~l-~PDlIi~~~~~~~~~~~~~~~~~~ip~~~~~~~~ 93 (238)
T PF01497_consen 55 AILAL-KPDLIIGSSFYGQSEEIEKLLEAGIPVVVFDSSS 93 (238)
T ss_dssp HHHHT---SEEEEETTSSCHHHHHHHHHTTSEEEEESSTT
T ss_pred HHHhC-CCCEEEEeccccchHHHHHHhcccceEEEeeccc
Confidence 34456 99999976655 344446677899999987754
No 345
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=28.67 E-value=1.2e+02 Score=29.64 Aligned_cols=82 Identities=12% Similarity=0.156 Sum_probs=60.9
Q ss_pred CCeE-eccccc---hHHhhccCCccceecc--cCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCC
Q 046326 344 AGMV-VPSWAP---QVHILRHPSTGGFLSH--CGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPG 417 (476)
Q Consensus 344 ~~~~-~~~~~p---q~~iL~~~~~~~~I~H--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~ 417 (476)
+++. +.+++| +..+|..++++-|.|. =|.|++.-.+..|+|.++- .+-+.+-.. .+.|+-+-...
T Consensus 245 ~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~---~~np~~~~l---~~~~ipVlf~~--- 315 (360)
T PF07429_consen 245 ENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS---RDNPFWQDL---KEQGIPVLFYG--- 315 (360)
T ss_pred cceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEe---cCChHHHHH---HhCCCeEEecc---
Confidence 3554 456776 5679999999666665 6899999999999999876 444555444 34476665555
Q ss_pred CCCcCHHHHHHHHHHHhc
Q 046326 418 KKVIGREEIERVVRLVME 435 (476)
Q Consensus 418 ~~~~~~~~l~~ai~~~l~ 435 (476)
..++.+.++++=+++..
T Consensus 316 -d~L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 316 -DELDEALVREAQRQLAN 332 (360)
T ss_pred -ccCCHHHHHHHHHHHhh
Confidence 68999999999998875
No 346
>cd00861 ProRS_anticodon_short ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria. ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=28.57 E-value=1e+02 Score=23.07 Aligned_cols=36 Identities=14% Similarity=-0.057 Sum_probs=27.8
Q ss_pred CCEEEEEcCCCc--cCHHHHHHHHHHHHhcCCcEEEEEE
Q 046326 7 QPHVAVLPSPGL--GHLIPLLEFAKRLVLNHGVHVSFLV 43 (476)
Q Consensus 7 ~~rIll~~~p~~--GHi~P~l~La~~L~~rG~h~V~~~~ 43 (476)
+.+|+++|.... .+..-.+.++..|++.| ..|.+-.
T Consensus 1 P~qv~i~p~~~~~~~~~~~a~~la~~Lr~~g-~~v~~d~ 38 (94)
T cd00861 1 PFDVVIIPMNMKDEVQQELAEKLYAELQAAG-VDVLLDD 38 (94)
T ss_pred CeEEEEEEcCCCcHHHHHHHHHHHHHHHHCC-CEEEEEC
Confidence 356888887653 56677899999999999 8887743
No 347
>PRK07710 acetolactate synthase catalytic subunit; Reviewed
Probab=28.54 E-value=1.5e+02 Score=31.26 Aligned_cols=27 Identities=11% Similarity=0.399 Sum_probs=21.9
Q ss_pred ccceecccCch------HHHHHHhcCCcEeecc
Q 046326 363 TGGFLSHCGWN------STLESICHGVPMIAWP 389 (476)
Q Consensus 363 ~~~~I~HgG~~------s~~eal~~GvP~l~~P 389 (476)
.+++++|.|-| .+.||...++|+|++-
T Consensus 79 ~gv~~~t~GPG~~N~~~gl~~A~~~~~Pvl~It 111 (571)
T PRK07710 79 PGVVIATSGPGATNVVTGLADAMIDSLPLVVFT 111 (571)
T ss_pred CeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 33588888855 6889999999999994
No 348
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=28.30 E-value=5.5e+02 Score=24.77 Aligned_cols=35 Identities=9% Similarity=0.203 Sum_probs=26.4
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEec
Q 046326 99 SLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFVT 138 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~ 138 (476)
.+..+++ +.|++|+.- .....+|..+|+|++.++.
T Consensus 253 el~ali~---~a~l~Vs~D--SGp~HlAaA~g~p~v~Lfg 287 (344)
T TIGR02201 253 QLAALID---HARLFIGVD--SVPMHMAAALGTPLVALFG 287 (344)
T ss_pred HHHHHHH---hCCEEEecC--CHHHHHHHHcCCCEEEEEC
Confidence 4555555 669999753 4567799999999998875
No 349
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=28.28 E-value=77 Score=32.48 Aligned_cols=41 Identities=12% Similarity=0.135 Sum_probs=34.7
Q ss_pred CCCCEEEEEcCCCccCHHHH------------HHHHHHHHhcCCcEEEEEEccC
Q 046326 5 SLQPHVAVLPSPGLGHLIPL------------LEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 5 ~~~~rIll~~~p~~GHi~P~------------l~La~~L~~rG~h~V~~~~~~~ 46 (476)
.+.+||++...|+.=.+.|. .+||+++..+| ++|++++...
T Consensus 254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~G-A~VtlI~Gp~ 306 (475)
T PRK13982 254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAG-AEVTLISGPV 306 (475)
T ss_pred cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCC-CcEEEEeCCc
Confidence 35678999999998888885 68999999999 9999998663
No 350
>cd01147 HemV-2 Metal binding protein HemV-2. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=28.17 E-value=92 Score=28.70 Aligned_cols=38 Identities=11% Similarity=0.146 Sum_probs=23.8
Q ss_pred HHHHHHHhcCCCCEEEECCCcch--HHH-HHHHcCCCeEEEec
Q 046326 99 SLKSVLTELCNPNALVIDLFCTQ--AFE-ICSQLSIPTYSFVT 138 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~~~~--~~~-~A~~lgIP~v~~~~ 138 (476)
.++.+ ..+ +||+||....... ... +.+..|||++.+..
T Consensus 66 n~E~i-~~l-~PDLIi~~~~~~~~~~~~~l~~~~gipvv~~~~ 106 (262)
T cd01147 66 NYEKI-AAL-KPDVVIDVGSDDPTSIADDLQKKTGIPVVVLDG 106 (262)
T ss_pred CHHHH-Hhc-CCCEEEEecCCccchhHHHHHHhhCCCEEEEec
Confidence 34444 345 9999998654332 223 44458999988764
No 351
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=28.06 E-value=99 Score=28.84 Aligned_cols=39 Identities=18% Similarity=0.152 Sum_probs=27.8
Q ss_pred HHHHHHHhcCCCCEEEECCC-----cchHHHHHHHcCCCeEEEec
Q 046326 99 SLKSVLTELCNPNALVIDLF-----CTQAFEICSQLSIPTYSFVT 138 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~-----~~~~~~~A~~lgIP~v~~~~ 138 (476)
.=+.+++++ +.|+||+=.. +..=+.+|..+|||++++.-
T Consensus 188 ~n~al~~~~-~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~R 231 (256)
T TIGR00715 188 LEKALLREY-RIDAVVTKASGEQGGELEKVKAAEALGINVIRIAR 231 (256)
T ss_pred HHHHHHHHc-CCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeC
Confidence 346778888 9999997322 12224599999999998754
No 352
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=27.83 E-value=1.7e+02 Score=25.31 Aligned_cols=88 Identities=13% Similarity=0.090 Sum_probs=50.6
Q ss_pred HHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHHHHHHHhhcHHHHHH
Q 046326 24 LLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLHAIVEESLSKSLKSV 103 (476)
Q Consensus 24 ~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 103 (476)
+.+-..+|+++| -.|++++. -+++++....+.+ ++.|+.-.. ..+.. .++..
T Consensus 51 ~~~W~~e~k~~g-i~v~vvSN---n~e~RV~~~~~~l--~v~fi~~A~----------KP~~~------------~fr~A 102 (175)
T COG2179 51 LRAWLAELKEAG-IKVVVVSN---NKESRVARAAEKL--GVPFIYRAK----------KPFGR------------AFRRA 102 (175)
T ss_pred HHHHHHHHHhcC-CEEEEEeC---CCHHHHHhhhhhc--CCceeeccc----------CccHH------------HHHHH
Confidence 556677888888 66666653 3455565555555 455533221 11111 45556
Q ss_pred HHhcC--CCCEE-EECCCcchHHHHHHHcCCCeEEEeccc
Q 046326 104 LTELC--NPNAL-VIDLFCTQAFEICSQLSIPTYSFVTTS 140 (476)
Q Consensus 104 l~~~~--~pDlV-I~D~~~~~~~~~A~~lgIP~v~~~~~~ 140 (476)
+++++ ...++ |.|.. +.=+..++..|+-+|.+-+..
T Consensus 103 l~~m~l~~~~vvmVGDqL-~TDVlggnr~G~~tIlV~Pl~ 141 (175)
T COG2179 103 LKEMNLPPEEVVMVGDQL-FTDVLGGNRAGMRTILVEPLV 141 (175)
T ss_pred HHHcCCChhHEEEEcchh-hhhhhcccccCcEEEEEEEec
Confidence 66653 33444 45654 334557899999999977643
No 353
>PLN02929 NADH kinase
Probab=27.67 E-value=98 Score=29.60 Aligned_cols=67 Identities=15% Similarity=0.129 Sum_probs=43.3
Q ss_pred ccCCccceecccCchHHHHHHh---cCCcEeeccccc------hhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHH
Q 046326 359 RHPSTGGFLSHCGWNSTLESIC---HGVPMIAWPLYA------EQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERV 429 (476)
Q Consensus 359 ~~~~~~~~I~HgG~~s~~eal~---~GvP~l~~P~~~------DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~a 429 (476)
..++ ++|+-||-||+..+.. .++|++++=..- .++.|.-. +..-.|.-. .++.+++.++
T Consensus 63 ~~~D--lvi~lGGDGT~L~aa~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~---~~r~lGfL~-------~~~~~~~~~~ 130 (301)
T PLN02929 63 RDVD--LVVAVGGDGTLLQASHFLDDSIPVLGVNSDPTQKDEVEEYSDEFD---ARRSTGHLC-------AATAEDFEQV 130 (301)
T ss_pred CCCC--EEEEECCcHHHHHHHHHcCCCCcEEEEECCCcccccccccccccc---cccCccccc-------cCCHHHHHHH
Confidence 3456 4999999999999855 478988875531 12333211 111244332 4568999999
Q ss_pred HHHHhcCC
Q 046326 430 VRLVMEGE 437 (476)
Q Consensus 430 i~~~l~~~ 437 (476)
|.++++++
T Consensus 131 L~~il~g~ 138 (301)
T PLN02929 131 LDDVLFGR 138 (301)
T ss_pred HHHHHcCC
Confidence 99999865
No 354
>cd07062 Peptidase_S66_mccF_like Microcin C7 self-immunity protein determines resistance to exogenous microcin C7. Microcin C7 self-immunity protein (mccF): MccF, a homolog of the LD-carboxypeptidase family, mediates resistance against exogenously added microcin C7 (MccC7), a ribosomally-encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. The plasmid-encoded mccF gene is transcribed in the opposite direction to the other five genes (mccA-E) and is required for the full expression of immunity but not for production. The catalytic triad residues (Ser, His, Glu) of LD-carboxypeptidase are also conserved in MccF, strongly suggesting that MccF shares the hydrolytic activity with LD-carboxypeptidases. Substrates of MccF have not been deduced, but could likely be microcin C7 precursors. The possible role of MccF is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that M
Probab=27.61 E-value=1.1e+02 Score=29.30 Aligned_cols=29 Identities=10% Similarity=0.021 Sum_probs=23.2
Q ss_pred CCCHHHHHHHHHHHHhCCCceEEEEecCC
Q 046326 281 TLTAEQVTEMAWGLEQSKQRFIWVVRMPS 309 (476)
Q Consensus 281 ~~~~~~~~~~~~al~~~~~~~i~~~~~~~ 309 (476)
..+.+...++.+++....+..||...++.
T Consensus 49 g~~~~Ra~dL~~a~~Dp~i~aI~~~rGG~ 77 (308)
T cd07062 49 ASPEERAEELMAAFADPSIKAIIPTIGGD 77 (308)
T ss_pred CCHHHHHHHHHHHhcCCCCCEEEECCccc
Confidence 34556788899999999999999987753
No 355
>TIGR01279 DPOR_bchN light-independent protochlorophyllide reductase, N subunit. This enzyme describes the N subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme involved in bacteriochlorophyll biosynthesis. This subunit shows homology to the nitrogenase molybdenum-iron protein NifN.
Probab=27.60 E-value=3.7e+02 Score=26.97 Aligned_cols=34 Identities=12% Similarity=-0.047 Sum_probs=22.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEcc
Q 046326 6 LQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVIT 45 (476)
Q Consensus 6 ~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~ 45 (476)
..+|++++.-+ .-.+.+++.|.+.| -+|..+.+.
T Consensus 273 ~Gkrv~i~gd~-----~~~~~l~~~L~elG-m~~v~~~t~ 306 (407)
T TIGR01279 273 RGKKIFFFGDN-----LLELPLARFLKRCG-MEVVECGTP 306 (407)
T ss_pred CCCEEEEECCc-----hHHHHHHHHHHHCC-CEEEEecCC
Confidence 35677776543 34567788888888 777666544
No 356
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=27.48 E-value=1.1e+02 Score=28.28 Aligned_cols=39 Identities=18% Similarity=0.224 Sum_probs=27.4
Q ss_pred HHHHHHHhcCCCCEEEECCC-----cchHHHHHHHcCCCeEEEec
Q 046326 99 SLKSVLTELCNPNALVIDLF-----CTQAFEICSQLSIPTYSFVT 138 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~-----~~~~~~~A~~lgIP~v~~~~ 138 (476)
.=+.+++++ +.|+||+=.. +..=+.+|+.+|||++.+--
T Consensus 187 ~n~all~q~-~id~vItK~SG~~Gg~~~Ki~aA~eLgi~VI~I~R 230 (257)
T COG2099 187 DNKALLEQY-RIDVVVTKNSGGAGGTYEKIEAARELGIPVIMIER 230 (257)
T ss_pred HHHHHHHHh-CCCEEEEccCCcccCcHHHHHHHHHcCCcEEEEec
Confidence 336667777 9999997321 22234589999999998643
No 357
>PF01993 MTD: methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase; InterPro: IPR002844 This archaeal enzyme family is involved in formation of methane from carbon dioxide 1.5.99.9 from EC. The enzyme requires coenzyme F420 [].; GO: 0008901 ferredoxin hydrogenase activity, 0015948 methanogenesis, 0055114 oxidation-reduction process; PDB: 1U6I_D 3IQF_G 1QV9_C 3IQE_F 1U6J_G 3IQZ_D 1U6K_B.
Probab=27.27 E-value=1.2e+02 Score=27.71 Aligned_cols=41 Identities=17% Similarity=0.262 Sum_probs=22.9
Q ss_pred HHHHHHHhcCCCCEEEEC---CCcchH---HHHHHHcCCCeEEEeccc
Q 046326 99 SLKSVLTELCNPNALVID---LFCTQA---FEICSQLSIPTYSFVTTS 140 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D---~~~~~~---~~~A~~lgIP~v~~~~~~ 140 (476)
...+.+++| +||++|+- ...+.. ..+-...|||+|+++-.+
T Consensus 50 ~~~~~~~~~-~pdf~I~isPN~~~PGP~~ARE~l~~~~iP~IvI~D~p 96 (276)
T PF01993_consen 50 VVTKMLKEW-DPDFVIVISPNAAAPGPTKAREMLSAKGIPCIVISDAP 96 (276)
T ss_dssp HHHHHHHHH---SEEEEE-S-TTSHHHHHHHHHHHHSSS-EEEEEEGG
T ss_pred HHHHHHHhh-CCCEEEEECCCCCCCCcHHHHHHHHhCCCCEEEEcCCC
Confidence 456677788 99998852 222222 123334699999987644
No 358
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=27.15 E-value=60 Score=29.58 Aligned_cols=26 Identities=15% Similarity=0.317 Sum_probs=19.6
Q ss_pred CHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 20 HLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 20 Hi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
|+..|-..|++|+++| |+|.++....
T Consensus 47 ~~saMRhfa~~L~~~G-~~V~Y~~~~~ 72 (224)
T PF04244_consen 47 FFSAMRHFADELRAKG-FRVHYIELDD 72 (224)
T ss_dssp HHHHHHHHHHHHHHTT---EEEE-TT-
T ss_pred HHHHHHHHHHHHHhCC-CEEEEEeCCC
Confidence 5678899999999999 9999997664
No 359
>cd01143 YvrC Periplasmic binding protein YvrC. These proteins are predicted to function as initial receptors in ABC transport of metal ions in eubacteria and archaea. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains.
Probab=27.06 E-value=1.1e+02 Score=26.64 Aligned_cols=38 Identities=13% Similarity=0.300 Sum_probs=24.2
Q ss_pred HHHHHHHhcCCCCEEEECCCcch-HHHHHHHcCCCeEEEec
Q 046326 99 SLKSVLTELCNPNALVIDLFCTQ-AFEICSQLSIPTYSFVT 138 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~~~~-~~~~A~~lgIP~v~~~~ 138 (476)
.+..+ .++ +||+||....... ...-.++.|+|++.+..
T Consensus 52 n~E~l-~~l-~PDlii~~~~~~~~~~~~l~~~gi~v~~~~~ 90 (195)
T cd01143 52 NVEKI-VAL-KPDLVIVSSSSLAELLEKLKDAGIPVVVLPA 90 (195)
T ss_pred CHHHH-hcc-CCCEEEEcCCcCHHHHHHHHHcCCcEEEeCC
Confidence 44444 345 9999998653332 23455778999887653
No 360
>PTZ00393 protein tyrosine phosphatase; Provisional
Probab=27.01 E-value=4.3e+02 Score=24.39 Aligned_cols=59 Identities=15% Similarity=0.097 Sum_probs=39.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCC
Q 046326 5 SLQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVD 73 (476)
Q Consensus 5 ~~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (476)
-+.+|++++-.|....+.-++ ++|.+.| ....+-+.+..++...+... |+.++.++.++
T Consensus 89 ~~~~rfLi~~~P~~~~~~~yl---~eLk~~g-V~~lVrlcE~~Yd~~~~~~~------GI~~~~lpipD 147 (241)
T PTZ00393 89 HGKIKILILDAPTNDLLPLYI---KEMKNYN-VTDLVRTCERTYNDGEITSA------GINVHELIFPD 147 (241)
T ss_pred cCceeEEEeCCCCHHHHHHHH---HHHHHcC-CCEEEECCCCCCCHHHHHHc------CCeEEEeecCC
Confidence 457899999999988664333 8899998 54444444433443434433 89998888763
No 361
>PRK13236 nitrogenase reductase; Reviewed
Probab=26.94 E-value=1.2e+02 Score=29.01 Aligned_cols=42 Identities=5% Similarity=-0.038 Sum_probs=33.3
Q ss_pred CCCCCEEEEE-cCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 4 ESLQPHVAVL-PSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 4 ~~~~~rIll~-~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
+.+.+|++-+ -=|+-|-..-.+.||..|+++| ++|.++-.+.
T Consensus 2 ~~~~~~~~~~~GKGGVGKTt~a~NLA~~La~~G-~rVLliD~D~ 44 (296)
T PRK13236 2 TDENIRQIAFYGKGGIGKSTTSQNTLAAMAEMG-QRILIVGCDP 44 (296)
T ss_pred CCcCceEEEEECCCcCCHHHHHHHHHHHHHHCC-CcEEEEEccC
Confidence 3456676555 3378899999999999999999 9999986553
No 362
>PF02780 Transketolase_C: Transketolase, C-terminal domain; InterPro: IPR005476 Transketolase 2.2.1.1 from EC (TK) catalyzes the reversible transfer of a two-carbon ketol unit from xylulose 5-phosphate to an aldose receptor, such as ribose 5-phosphate, to form sedoheptulose 7-phosphate and glyceraldehyde 3- phosphate. This enzyme, together with transaldolase, provides a link between the glycolytic and pentose-phosphate pathways. TK requires thiamine pyrophosphate as a cofactor. In most sources where TK has been purified, it is a homodimer of approximately 70 Kd subunits. TK sequences from a variety of eukaryotic and prokaryotic sources [, ] show that the enzyme has been evolutionarily conserved. In the peroxisomes of methylotrophic yeast Pichia angusta (Yeast) (Hansenula polymorpha), there is a highly related enzyme, dihydroxy-acetone synthase (DHAS) 2.2.1.3 from EC (also known as formaldehyde transketolase), which exhibits a very unusual specificity by including formaldehyde amongst its substrates. 1-deoxyxylulose-5-phosphate synthase (DXP synthase) [] is an enzyme so far found in bacteria (gene dxs) and plants (gene CLA1) which catalyzes the thiamine pyrophosphoate-dependent acyloin condensation reaction between carbon atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (dxp), a precursor in the biosynthetic pathway to isoprenoids, thiamine (vitamin B1), and pyridoxol (vitamin B6). DXP synthase is evolutionary related to TK. The N-terminal section, contains a histidine residue which appears to function in proton transfer during catalysis []. In the central section there are conserved acidic residues that are part of the active cleft and may participate in substrate-binding []. This family includes transketolase enzymes 2.2.1.1 from EC and also partially matches to 2-oxoisovalerate dehydrogenase beta subunit P37941 from SWISSPROT 1.2.4.4 from EC. Both these enzymes utilise thiamine pyrophosphate as a cofactor, suggesting there may be common aspects in their mechanism of catalysis.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1NGS_B 1TKA_A 1TRK_B 1TKB_A 1GPU_B 1AY0_B 1TKC_B 2E6K_A 3JU3_A 2R8P_B ....
Probab=26.60 E-value=1.2e+02 Score=24.48 Aligned_cols=37 Identities=11% Similarity=0.171 Sum_probs=30.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEcc
Q 046326 6 LQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVIT 45 (476)
Q Consensus 6 ~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~ 45 (476)
+..+|+++++++. +...+..++.|.+.| .+++++...
T Consensus 8 ~g~di~iia~G~~--~~~al~A~~~L~~~G-i~~~vi~~~ 44 (124)
T PF02780_consen 8 EGADITIIAYGSM--VEEALEAAEELEEEG-IKAGVIDLR 44 (124)
T ss_dssp SSSSEEEEEETTH--HHHHHHHHHHHHHTT-CEEEEEEEE
T ss_pred CCCCEEEEeehHH--HHHHHHHHHHHHHcC-CceeEEeeE
Confidence 4567899999888 567899999999999 888887654
No 363
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=26.57 E-value=2.1e+02 Score=28.47 Aligned_cols=72 Identities=17% Similarity=0.224 Sum_probs=49.0
Q ss_pred HHhhccCCccceecccCchHHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeE-EeccccCCCCCcCHHHHHHHHHHH
Q 046326 355 VHILRHPSTGGFLSHCGWNSTLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVA-VKPETEPGKKVIGREEIERVVRLV 433 (476)
Q Consensus 355 ~~iL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G-~~l~~~~~~~~~~~~~l~~ai~~~ 433 (476)
..+++++++ +|. .=+=|+.-|++.|+|.+++-+ |+-+.... +++|+- ..++. ..++.+.+...+.+.
T Consensus 280 ~~~l~~~dl--~Vg-~R~HsaI~al~~g~p~i~i~Y---~~K~~~l~--~~~gl~~~~~~i----~~~~~~~l~~~~~e~ 347 (385)
T COG2327 280 GGILAACDL--IVG-MRLHSAIMALAFGVPAIAIAY---DPKVRGLM--QDLGLPGFAIDI----DPLDAEILSAVVLER 347 (385)
T ss_pred HHHhccCce--EEe-ehhHHHHHHHhcCCCeEEEee---cHHHHHHH--HHcCCCcccccC----CCCchHHHHHHHHHH
Confidence 346777774 332 223467889999999999955 55555555 666763 44444 578999999999888
Q ss_pred hcCCh
Q 046326 434 MEGEE 438 (476)
Q Consensus 434 l~~~~ 438 (476)
+.+..
T Consensus 348 ~~~~~ 352 (385)
T COG2327 348 LTKLD 352 (385)
T ss_pred HhccH
Confidence 86543
No 364
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This represents the N-terminal TPP binding domain of TPP enzymes.; GO: 0030976 thiamine pyrophosphate binding; PDB: 3HWX_1 3FLM_B 3HWW_A 2JLC_A 2JLA_A 2VBG_A 2VBF_B 2Q29_A 2Q27_B 2Q28_B ....
Probab=26.08 E-value=1.7e+02 Score=25.11 Aligned_cols=26 Identities=8% Similarity=0.114 Sum_probs=20.5
Q ss_pred ceecccCc------hHHHHHHhcCCcEeeccc
Q 046326 365 GFLSHCGW------NSTLESICHGVPMIAWPL 390 (476)
Q Consensus 365 ~~I~HgG~------~s~~eal~~GvP~l~~P~ 390 (476)
++++|.|- +++.+|...++|+|++.-
T Consensus 67 v~~~~~GpG~~n~~~~l~~A~~~~~Pvl~i~g 98 (172)
T PF02776_consen 67 VVIVTSGPGATNALTGLANAYADRIPVLVITG 98 (172)
T ss_dssp EEEEETTHHHHTTHHHHHHHHHTT-EEEEEEE
T ss_pred EEEeecccchHHHHHHHhhcccceeeEEEEec
Confidence 47888774 578899999999999875
No 365
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]
Probab=25.95 E-value=1.1e+02 Score=28.37 Aligned_cols=38 Identities=18% Similarity=0.380 Sum_probs=33.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEcc
Q 046326 7 QPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVIT 45 (476)
Q Consensus 7 ~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~ 45 (476)
...++|+-.|+.|-.+=+.+||.+|.++| +.|+|++..
T Consensus 105 ~~nl~l~G~~G~GKThLa~Ai~~~l~~~g-~sv~f~~~~ 142 (254)
T COG1484 105 GENLVLLGPPGVGKTHLAIAIGNELLKAG-ISVLFITAP 142 (254)
T ss_pred CCcEEEECCCCCcHHHHHHHHHHHHHHcC-CeEEEEEHH
Confidence 44688888899999999999999999889 999999855
No 366
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=25.93 E-value=3.4e+02 Score=27.52 Aligned_cols=37 Identities=14% Similarity=0.059 Sum_probs=31.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHH-hcCCcEEEEEEccC
Q 046326 9 HVAVLPSPGLGHLIPLLEFAKRLV-LNHGVHVSFLVITT 46 (476)
Q Consensus 9 rIll~~~p~~GHi~P~l~La~~L~-~rG~h~V~~~~~~~ 46 (476)
-|+++..++.|-..-...||..|. ++| +.|.++..++
T Consensus 101 vi~~vG~~GsGKTTtaakLA~~l~~~~g-~kV~lV~~D~ 138 (428)
T TIGR00959 101 VILMVGLQGSGKTTTCGKLAYYLKKKQG-KKVLLVACDL 138 (428)
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHHhCC-CeEEEEeccc
Confidence 456666679999999999999997 578 9999998876
No 367
>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase. 2-oxoglutarate decarboxylase/SHCHC synthase (menD) is a thiamine pyrophosphate enzyme involved in menaquinone biosynthesis.
Probab=25.87 E-value=4.9e+02 Score=26.30 Aligned_cols=25 Identities=24% Similarity=0.416 Sum_probs=20.8
Q ss_pred cceecccCc------hHHHHHHhcCCcEeec
Q 046326 364 GGFLSHCGW------NSTLESICHGVPMIAW 388 (476)
Q Consensus 364 ~~~I~HgG~------~s~~eal~~GvP~l~~ 388 (476)
+++++|+|- +.++||.+.++|+|++
T Consensus 65 gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i 95 (432)
T TIGR00173 65 VAVVCTSGTAVANLLPAVIEASYSGVPLIVL 95 (432)
T ss_pred EEEEECCcchHhhhhHHHHHhcccCCcEEEE
Confidence 348888774 4788999999999999
No 368
>PRK05784 phosphoribosylamine--glycine ligase; Provisional
Probab=25.81 E-value=4.4e+02 Score=27.24 Aligned_cols=30 Identities=20% Similarity=0.124 Sum_probs=23.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhc--CCcEEEEEE
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLN--HGVHVSFLV 43 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~r--G~h~V~~~~ 43 (476)
|+|+++-.+++.| +|++.|++. | ++|.++-
T Consensus 1 mkVLviG~Ggreh-----al~~~l~~s~~g-~~v~~~~ 32 (486)
T PRK05784 1 MKVLLVGDGAREH-----ALAEALEKSTKG-YKVYALS 32 (486)
T ss_pred CEEEEECCchhHH-----HHHHHHHhCCCC-CEEEEEE
Confidence 6899998888877 678888776 7 7777773
No 369
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=25.74 E-value=1.5e+02 Score=26.12 Aligned_cols=41 Identities=17% Similarity=0.273 Sum_probs=28.0
Q ss_pred HHHHHHHhcCCCC--EEEECCCc-chHHHHHHHcCCCeEEEeccc
Q 046326 99 SLKSVLTELCNPN--ALVIDLFC-TQAFEICSQLSIPTYSFVTTS 140 (476)
Q Consensus 99 ~l~~~l~~~~~pD--lVI~D~~~-~~~~~~A~~lgIP~v~~~~~~ 140 (476)
.+.+++++. .++ ++|...+- +++..+|+++|+|.|++.|+-
T Consensus 48 ~l~~~i~~~-~~~~~~liGSSlGG~~A~~La~~~~~~avLiNPav 91 (187)
T PF05728_consen 48 QLEQLIEEL-KPENVVLIGSSLGGFYATYLAERYGLPAVLINPAV 91 (187)
T ss_pred HHHHHHHhC-CCCCeEEEEEChHHHHHHHHHHHhCCCEEEEcCCC
Confidence 567777776 544 56654433 345568999999999887644
No 370
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=25.51 E-value=1.5e+02 Score=28.23 Aligned_cols=55 Identities=18% Similarity=0.325 Sum_probs=38.7
Q ss_pred ccCCccceecccCchHHHHHHhc----CCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHh
Q 046326 359 RHPSTGGFLSHCGWNSTLESICH----GVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVM 434 (476)
Q Consensus 359 ~~~~~~~~I~HgG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l 434 (476)
..+++ +|+=||-||+..++.. ++|++++-. -++ |.- -.++.+++.+++.+++
T Consensus 63 ~~~dl--vi~lGGDGT~L~aa~~~~~~~~PilGIN~--------G~l-------GFL-------t~~~~~~~~~~l~~i~ 118 (292)
T PRK01911 63 GSADM--VISIGGDGTFLRTATYVGNSNIPILGINT--------GRL-------GFL-------ATVSKEEIEETIDELL 118 (292)
T ss_pred cCCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEec--------CCC-------Ccc-------cccCHHHHHHHHHHHH
Confidence 35664 9999999999998873 678777632 222 211 2466788888998888
Q ss_pred cCC
Q 046326 435 EGE 437 (476)
Q Consensus 435 ~~~ 437 (476)
+++
T Consensus 119 ~g~ 121 (292)
T PRK01911 119 NGD 121 (292)
T ss_pred cCC
Confidence 765
No 371
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=25.40 E-value=1.4e+02 Score=29.55 Aligned_cols=35 Identities=14% Similarity=0.053 Sum_probs=26.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEc
Q 046326 5 SLQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVI 44 (476)
Q Consensus 5 ~~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~ 44 (476)
+++|+|++. |+.|.+- -.|++.|.++| |+|+.+.-
T Consensus 19 ~~~~~IlVt--GgtGfIG--~~l~~~L~~~G-~~V~~v~r 53 (370)
T PLN02695 19 SEKLRICIT--GAGGFIA--SHIARRLKAEG-HYIIASDW 53 (370)
T ss_pred CCCCEEEEE--CCccHHH--HHHHHHHHhCC-CEEEEEEe
Confidence 567888876 5666654 47899999999 99998863
No 372
>PRK13604 luxD acyl transferase; Provisional
Probab=25.37 E-value=1.3e+02 Score=28.85 Aligned_cols=35 Identities=17% Similarity=0.090 Sum_probs=28.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEE
Q 046326 7 QPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFL 42 (476)
Q Consensus 7 ~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~ 42 (476)
+...+++..+..++-.-+..+|+.|.++| ..|...
T Consensus 36 ~~~~vIi~HGf~~~~~~~~~~A~~La~~G-~~vLrf 70 (307)
T PRK13604 36 KNNTILIASGFARRMDHFAGLAEYLSSNG-FHVIRY 70 (307)
T ss_pred CCCEEEEeCCCCCChHHHHHHHHHHHHCC-CEEEEe
Confidence 44678888888888777999999999999 555544
No 373
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=25.36 E-value=1.1e+02 Score=30.10 Aligned_cols=26 Identities=23% Similarity=0.447 Sum_probs=22.6
Q ss_pred CCccceecccCchH---HHHHHhcCCcEeec
Q 046326 361 PSTGGFLSHCGWNS---TLESICHGVPMIAW 388 (476)
Q Consensus 361 ~~~~~~I~HgG~~s---~~eal~~GvP~l~~ 388 (476)
|++ +|++||+-| +..|...|+|.++.
T Consensus 92 Pdv--vi~~Ggy~s~p~~~aa~~~~~p~~i~ 120 (352)
T PRK12446 92 PDV--IFSKGGFVSVPVVIGGWLNRVPVLLH 120 (352)
T ss_pred CCE--EEecCchhhHHHHHHHHHcCCCEEEE
Confidence 664 999999986 89999999999874
No 374
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]
Probab=25.08 E-value=3.4e+02 Score=29.90 Aligned_cols=41 Identities=27% Similarity=0.357 Sum_probs=36.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 5 SLQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 5 ~~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
.-++||.|=..|+-|-.+-||.=|++|.+.| .+|.+-..++
T Consensus 20 RGklkIf~G~apGVGKTyaML~~a~~~~~~G-~DvviG~vEt 60 (890)
T COG2205 20 RGKLKIFLGAAPGVGKTYAMLSEAQRLLAEG-VDVVIGVVET 60 (890)
T ss_pred CCceEEEeecCCCccHHHHHHHHHHHHHHcC-CcEEEEEecC
Confidence 3468999999999999999999999999999 8888877775
No 375
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=25.06 E-value=4.4e+02 Score=22.56 Aligned_cols=116 Identities=22% Similarity=0.272 Sum_probs=57.5
Q ss_pred EcCCCccCHHHHH-HHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCC----CCCCCCCCchHHH
Q 046326 13 LPSPGLGHLIPLL-EFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDV----SAVTSDDMPVVTR 87 (476)
Q Consensus 13 ~~~p~~GHi~P~l-~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 87 (476)
+.+...+.+..+| .+|.+|+++| ++|.=++....... ..-........++.... +++ -.+.. ...
T Consensus 4 v~~~~~~~~d~lL~~~a~~L~~~G-~rv~G~vQ~~~~~~-------~~~~~~m~l~dl~~G~~~~IsQ~L-G~gs~-gCr 73 (159)
T PF10649_consen 4 VVYDDGGDIDALLAAFAARLRARG-VRVAGLVQRNTADG-------DGGRCDMDLRDLPSGRRIRISQDL-GPGSR-GCR 73 (159)
T ss_pred EEcCCCCCHHHHHHHHHHHHHhCC-CeEEEEeccccCCC-------CCCccceEEEECCCCCEEEEeecc-CCCCc-ccc
Confidence 3444556666655 6899999999 77776665420000 00001344444433221 111 11110 000
Q ss_pred H-HHHHHHhhcHHHHHHHHhcCCCCEEEECCCcc---------hHHHHHHHcCCCeEEEecccH
Q 046326 88 L-HAIVEESLSKSLKSVLTELCNPNALVIDLFCT---------QAFEICSQLSIPTYSFVTTSV 141 (476)
Q Consensus 88 ~-~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~---------~~~~~A~~lgIP~v~~~~~~~ 141 (476)
+ ...+..... .++..+++ ++|++|.+-|-- .....|-..|||+++..+...
T Consensus 74 LD~~~La~A~~-~l~~al~~--~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V~~~~ 134 (159)
T PF10649_consen 74 LDPGALAEASA-ALRRALAE--GADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAVPPRN 134 (159)
T ss_pred cCHHHHHHHHH-HHHHHHhc--CCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEECHHH
Confidence 0 011222223 45666665 899999875431 122245667999998766443
No 376
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=25.02 E-value=1.1e+02 Score=28.35 Aligned_cols=39 Identities=18% Similarity=0.263 Sum_probs=29.0
Q ss_pred HHHHHHHhcCCCCEEE--ECCCcc----hHHHHHHHcCCCeEEEec
Q 046326 99 SLKSVLTELCNPNALV--IDLFCT----QAFEICSQLSIPTYSFVT 138 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI--~D~~~~----~~~~~A~~lgIP~v~~~~ 138 (476)
.+++++++. +.|+|| ++++.. -+..+|+..|||++.|--
T Consensus 57 ~l~~~l~e~-~i~llIDATHPyAa~iS~Na~~aake~gipy~r~eR 101 (257)
T COG2099 57 GLAAFLREE-GIDLLIDATHPYAARISQNAARAAKETGIPYLRLER 101 (257)
T ss_pred HHHHHHHHc-CCCEEEECCChHHHHHHHHHHHHHHHhCCcEEEEEC
Confidence 788889988 999999 344332 234589999999998643
No 377
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=24.98 E-value=1.1e+02 Score=23.46 Aligned_cols=40 Identities=15% Similarity=0.189 Sum_probs=26.2
Q ss_pred HHHHHHhcCCCCEEE--ECCCc---chH-HHHHHHcCCCeEEEecccHH
Q 046326 100 LKSVLTELCNPNALV--IDLFC---TQA-FEICSQLSIPTYSFVTTSVH 142 (476)
Q Consensus 100 l~~~l~~~~~pDlVI--~D~~~---~~~-~~~A~~lgIP~v~~~~~~~~ 142 (476)
+.+.+. ++|+|| +|+.. .+. ...|++.|+|++.....+..
T Consensus 42 l~~~i~---~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~~~~~~~~ 87 (97)
T PF10087_consen 42 LPSKIK---KADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIYSRSRGVS 87 (97)
T ss_pred HHHhcC---CCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEEECCCCHH
Confidence 444444 778887 45433 333 34899999999998755544
No 378
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=24.97 E-value=6.6e+02 Score=25.09 Aligned_cols=33 Identities=21% Similarity=0.263 Sum_probs=25.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEcc
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVIT 45 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~ 45 (476)
++|+++-.|.-|+ .+|+-|+++|+++|+++.-+
T Consensus 2 ~~ilviGaG~Vg~-----~va~~la~~~d~~V~iAdRs 34 (389)
T COG1748 2 MKILVIGAGGVGS-----VVAHKLAQNGDGEVTIADRS 34 (389)
T ss_pred CcEEEECCchhHH-----HHHHHHHhCCCceEEEEeCC
Confidence 5677776655554 67899999987899999754
No 379
>PRK07206 hypothetical protein; Provisional
Probab=24.76 E-value=2.7e+02 Score=27.86 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=23.3
Q ss_pred HHHHHHHhcCCCCEEEE--CCCcchHHHHHHHcCCC
Q 046326 99 SLKSVLTELCNPNALVI--DLFCTQAFEICSQLSIP 132 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~--D~~~~~~~~~A~~lgIP 132 (476)
.+.+++++. ++|.||. |.....+..+++.+|+|
T Consensus 61 ~l~~~~~~~-~~d~vi~~~e~~~~~~a~l~~~l~l~ 95 (416)
T PRK07206 61 DLVEFLRKL-GPEAIIAGAESGVELADRLAEILTPQ 95 (416)
T ss_pred HHHHHHHHc-CCCEEEECCCccHHHHHHHHHhcCCC
Confidence 455667777 9999994 44444455578888988
No 380
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
Probab=24.69 E-value=3.6e+02 Score=23.49 Aligned_cols=35 Identities=14% Similarity=0.177 Sum_probs=25.0
Q ss_pred HHhhccCCccceecccCchHHHHHHh---------cCCcEeecc
Q 046326 355 VHILRHPSTGGFLSHCGWNSTLESIC---------HGVPMIAWP 389 (476)
Q Consensus 355 ~~iL~~~~~~~~I~HgG~~s~~eal~---------~GvP~l~~P 389 (476)
..+|-..+-..++--||.||+-|.+. +.+|++++=
T Consensus 90 k~~m~~~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n 133 (178)
T TIGR00730 90 KAMMAELADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFN 133 (178)
T ss_pred HHHHHHhCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEEC
Confidence 34555545546778899999998743 489988874
No 381
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=24.69 E-value=6.4e+02 Score=24.92 Aligned_cols=33 Identities=30% Similarity=0.325 Sum_probs=26.5
Q ss_pred CCEEEEEc-CCCccCHHHHHHHHHHHHhcCCcEEEEEEcc
Q 046326 7 QPHVAVLP-SPGLGHLIPLLEFAKRLVLNHGVHVSFLVIT 45 (476)
Q Consensus 7 ~~rIll~~-~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~ 45 (476)
.++|+++- .|..|. .+|+.|+++| |+|+++...
T Consensus 98 ~~~I~IiGG~GlmG~-----slA~~l~~~G-~~V~~~d~~ 131 (374)
T PRK11199 98 LRPVVIVGGKGQLGR-----LFAKMLTLSG-YQVRILEQD 131 (374)
T ss_pred cceEEEEcCCChhhH-----HHHHHHHHCC-CeEEEeCCC
Confidence 46888886 777775 6889999999 999998753
No 382
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=24.67 E-value=1.4e+02 Score=30.85 Aligned_cols=55 Identities=13% Similarity=0.173 Sum_probs=38.7
Q ss_pred ccCCccceecccCchHHHHHHhc----CCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHh
Q 046326 359 RHPSTGGFLSHCGWNSTLESICH----GVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVM 434 (476)
Q Consensus 359 ~~~~~~~~I~HgG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l 434 (476)
..++ ++|+=||-||++.+... ++|++++ |.-++ |. + . .++.+++.++|.+++
T Consensus 261 ~~~D--lVIsiGGDGTlL~Aar~~~~~~iPILGI--------N~G~L-------GF-L-t-----~i~~~e~~~~Le~il 316 (508)
T PLN02935 261 TKVD--LVITLGGDGTVLWAASMFKGPVPPVVPF--------SMGSL-------GF-M-T-----PFHSEQYRDCLDAIL 316 (508)
T ss_pred cCCC--EEEEECCcHHHHHHHHHhccCCCcEEEE--------eCCCc-------ce-e-c-----ccCHHHHHHHHHHHH
Confidence 3456 59999999999999774 4566655 33222 33 1 2 467889999999998
Q ss_pred cCC
Q 046326 435 EGE 437 (476)
Q Consensus 435 ~~~ 437 (476)
+++
T Consensus 317 ~G~ 319 (508)
T PLN02935 317 KGP 319 (508)
T ss_pred cCC
Confidence 765
No 383
>PRK04148 hypothetical protein; Provisional
Probab=24.65 E-value=97 Score=25.67 Aligned_cols=33 Identities=18% Similarity=0.144 Sum_probs=24.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEcc
Q 046326 6 LQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVIT 45 (476)
Q Consensus 6 ~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~ 45 (476)
+.++|+.+-.| .| ..+|..|++.| |+|+.+=..
T Consensus 16 ~~~kileIG~G-fG-----~~vA~~L~~~G-~~ViaIDi~ 48 (134)
T PRK04148 16 KNKKIVELGIG-FY-----FKVAKKLKESG-FDVIVIDIN 48 (134)
T ss_pred cCCEEEEEEec-CC-----HHHHHHHHHCC-CEEEEEECC
Confidence 35788888777 33 35688899999 999887543
No 384
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=24.62 E-value=6.3e+02 Score=24.21 Aligned_cols=99 Identities=21% Similarity=0.300 Sum_probs=55.6
Q ss_pred CEEEEEcCCCcc-----CHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCC
Q 046326 8 PHVAVLPSPGLG-----HLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDM 82 (476)
Q Consensus 8 ~rIll~~~p~~G-----Hi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (476)
.-|+|.|..+.| ...-+..|++.|.++| ..|.++.... +........+..+ -..+.+ .+ .
T Consensus 175 ~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~-~~ivl~G~~~--e~~~~~~i~~~~~--~~~~~l-----~g----~- 239 (334)
T TIGR02195 175 PIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQG-YQVVLFGSAK--DHPAGNEIEALLP--GELRNL-----AG----E- 239 (334)
T ss_pred CEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCC-CEEEEEEChh--hHHHHHHHHHhCC--cccccC-----CC----C-
Confidence 446666654333 2336789999998888 8887776542 3222222222111 000000 00 0
Q ss_pred chHHHHHHHHHHhhcHHHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEec
Q 046326 83 PVVTRLHAIVEESLSKSLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFVT 138 (476)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~~ 138 (476)
.... .+..+++ +.|++|+.- .....+|..+|+|++.++.
T Consensus 240 -----------~sL~-el~ali~---~a~l~I~~D--SGp~HlAaA~~~P~i~lfG 278 (334)
T TIGR02195 240 -----------TSLD-EAVDLIA---LAKAVVTND--SGLMHVAAALNRPLVALYG 278 (334)
T ss_pred -----------CCHH-HHHHHHH---hCCEEEeeC--CHHHHHHHHcCCCEEEEEC
Confidence 0112 4555566 669999653 3566799999999998765
No 385
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=24.46 E-value=2.3e+02 Score=26.86 Aligned_cols=102 Identities=21% Similarity=0.223 Sum_probs=53.4
Q ss_pred HHHHHHHHHHhcCCcEEEEEEccCCcchh----hhhhhhhc-CCCCceEEEcCCCCCCCCCCCCCchHHHHHHHHHHhhc
Q 046326 23 PLLEFAKRLVLNHGVHVSFLVITTNEASA----AKNNLLRS-LPHGLDVVDLPPVDVSAVTSDDMPVVTRLHAIVEESLS 97 (476)
Q Consensus 23 P~l~La~~L~~rG~h~V~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (476)
.-+.|++.|+++| +.|..+..+. .+.. ......+. +. +.+.+=+|.+...+ +..... .+......
T Consensus 12 r~~~~~~~l~~~g-~~v~~~g~~~-~~~~~~~~~~~~~~~~~~~-~~~~~i~p~~~~~~----~~~i~~---~~~~~~~~ 81 (287)
T TIGR02853 12 RQLELIRKLEELD-AKISLIGFDQ-LEDGFTGAVKCELLELDLT-TLDVVILPVPGTSH----DGKVAT---VFSNEKVV 81 (287)
T ss_pred HHHHHHHHHHHCC-CEEEEEeccc-cccccccceeecchhhhhc-cCCEEEECCccccC----CceEec---ccccCCcc
Confidence 4568999999999 9999998752 1110 00000000 11 34444444332211 101110 00111112
Q ss_pred HHHHHHHHhcCCCCEEEECCCcchHHH-HHHHcCCCeEEE
Q 046326 98 KSLKSVLTELCNPNALVIDLFCTQAFE-ICSQLSIPTYSF 136 (476)
Q Consensus 98 ~~l~~~l~~~~~pDlVI~D~~~~~~~~-~A~~lgIP~v~~ 136 (476)
.-+++++.+ ++.+++.--....-.. .|+..||+++-+
T Consensus 82 -l~~~~l~~~-~~~~~~~~G~~~~~l~~~a~~~gi~v~~~ 119 (287)
T TIGR02853 82 -LTPELLEST-KGHCTIYVGISNPYLEQLAADAGVKLIEL 119 (287)
T ss_pred -ccHHHHHhc-CCCCEEEEecCCHHHHHHHHHCCCeEEEE
Confidence 226677777 7777775545555555 999999998853
No 386
>PRK12744 short chain dehydrogenase; Provisional
Probab=24.43 E-value=2.1e+02 Score=26.14 Aligned_cols=40 Identities=18% Similarity=0.074 Sum_probs=25.9
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEc
Q 046326 1 MAVESLQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVI 44 (476)
Q Consensus 1 m~~~~~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~ 44 (476)
|++..-+-+.++++.++.| =-.++|+.|.++| ++|.++..
T Consensus 1 ~~~~~l~~k~vlItGa~~g---IG~~~a~~l~~~G-~~vv~i~~ 40 (257)
T PRK12744 1 MADHSLKGKVVLIAGGAKN---LGGLIARDLAAQG-AKAVAIHY 40 (257)
T ss_pred CCCCCCCCcEEEEECCCch---HHHHHHHHHHHCC-CcEEEEec
Confidence 6654333345666665543 3457899999999 98766653
No 387
>COG3349 Uncharacterized conserved protein [Function unknown]
Probab=24.27 E-value=79 Score=32.35 Aligned_cols=32 Identities=22% Similarity=0.095 Sum_probs=25.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEcc
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVIT 45 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~ 45 (476)
|||+|+-.|-.| |+-|.+|+++| |+||++=..
T Consensus 1 ~rVai~GaG~Ag-----L~~a~~La~~g-~~vt~~ea~ 32 (485)
T COG3349 1 MRVAIAGAGLAG-----LAAAYELADAG-YDVTLYEAR 32 (485)
T ss_pred CeEEEEcccHHH-----HHHHHHHHhCC-CceEEEecc
Confidence 578887776554 88999999999 999998544
No 388
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=24.24 E-value=1.6e+02 Score=28.75 Aligned_cols=73 Identities=19% Similarity=0.278 Sum_probs=51.9
Q ss_pred cCCccceecc---cCch-HHHHHHhcCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhc
Q 046326 360 HPSTGGFLSH---CGWN-STLESICHGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVME 435 (476)
Q Consensus 360 ~~~~~~~I~H---gG~~-s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~ 435 (476)
|.++ +|+| .|.| --.|+|+-|-|.| -|+..+ .+ +|..-+. ++..+=++++.+++.
T Consensus 270 ~tD~--VvSHqWeN~lNYlY~daLyggYPLV---------HNS~~l--~d--~GYYY~~------fD~~~G~r~L~~A~~ 328 (364)
T PF10933_consen 270 HTDA--VVSHQWENPLNYLYYDALYGGYPLV---------HNSPLL--KD--VGYYYPD------FDAFEGARQLLRAIR 328 (364)
T ss_pred CCCE--EEeccccchhhHHHHHHHhcCCCcc---------cCcchh--cc--cCcCCCC------ccHHHHHHHHHHHHH
Confidence 5554 8888 4444 4578999999987 488888 44 7776654 667666677777665
Q ss_pred --CChhHHHHHHHHHHHHHH
Q 046326 436 --GEEGKVMRRRVQELKESA 453 (476)
Q Consensus 436 --~~~~~~~~~~a~~l~~~~ 453 (476)
|...+.|+++|+++=...
T Consensus 329 ~HD~~~~~Y~~ra~~~l~~~ 348 (364)
T PF10933_consen 329 EHDADLDAYRARARRLLDRL 348 (364)
T ss_pred HccccHHHHHHHHHHHHHhh
Confidence 333778999999887765
No 389
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=23.85 E-value=1.7e+02 Score=25.23 Aligned_cols=29 Identities=10% Similarity=0.072 Sum_probs=21.4
Q ss_pred CcEEEEecCCCCCCCHHHHHHHHHHHHhC
Q 046326 269 DSVLFAVPGSGGTLTAEQVTEMAWGLEQS 297 (476)
Q Consensus 269 ~~vvyvs~GS~~~~~~~~~~~~~~al~~~ 297 (476)
+..+|+++||......+.+...++.|...
T Consensus 7 ~~~v~i~LGSNlg~~~~~l~~A~~~L~~~ 35 (163)
T PRK14092 7 SALAYVGLGANLGDAAATLRSVLAELAAA 35 (163)
T ss_pred CCEEEEEecCchHhHHHHHHHHHHHHHhC
Confidence 34799999999765666677777777664
No 390
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=23.84 E-value=97 Score=26.62 Aligned_cols=35 Identities=23% Similarity=0.106 Sum_probs=26.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 6 LQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 6 ~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
+.++|+++-++++||. -|.-|++.| ++|++..-+.
T Consensus 3 ~~k~IAViGyGsQG~a-----~AlNLrDSG-~~V~Vglr~~ 37 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHA-----HALNLRDSG-VNVIVGLREG 37 (165)
T ss_dssp CTSEEEEES-SHHHHH-----HHHHHHHCC--EEEEEE-TT
T ss_pred CCCEEEEECCChHHHH-----HHHHHHhCC-CCEEEEecCC
Confidence 4678999999999985 477899999 8888877553
No 391
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=23.74 E-value=5.6e+02 Score=23.32 Aligned_cols=88 Identities=9% Similarity=0.008 Sum_probs=47.2
Q ss_pred hhccCCccceecccCchHHHHHHhc-----CCcEeeccccchhh-----hhhhhhcceeeeeEEeccccCCCCCcCHHHH
Q 046326 357 ILRHPSTGGFLSHCGWNSTLESICH-----GVPMIAWPLYAEQR-----MNAAMLTAEETGVAVKPETEPGKKVIGREEI 426 (476)
Q Consensus 357 iL~~~~~~~~I~HgG~~s~~eal~~-----GvP~l~~P~~~DQ~-----~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l 426 (476)
-|..+.+ +|.--+--.+.+.++. |++..++ |++ ..-..+ .+-++=+.+.. .+..-.-+..|
T Consensus 82 dl~g~~L--ViaATdD~~vN~~I~~~a~~~~~lvn~v----d~p~~~dFi~PAiv--~rg~l~IaIST-~G~sP~lar~l 152 (223)
T PRK05562 82 FIKDKHL--IVIATDDEKLNNKIRKHCDRLYKLYIDC----SDYKKGLCIIPYQR--STKNFVFALNT-KGGSPKTSVFI 152 (223)
T ss_pred HhCCCcE--EEECCCCHHHHHHHHHHHHHcCCeEEEc----CCcccCeEEeeeEE--ecCCEEEEEEC-CCcCcHHHHHH
Confidence 3555554 7777676666665443 5555543 333 333334 44345555555 11122334568
Q ss_pred HHHHHHHhcCChhHHHHHHHHHHHHHHHH
Q 046326 427 ERVVRLVMEGEEGKVMRRRVQELKESASR 455 (476)
Q Consensus 427 ~~ai~~~l~~~~~~~~~~~a~~l~~~~~~ 455 (476)
++.|.+++. +...+-+.+.++++.++.
T Consensus 153 R~~ie~~l~--~~~~l~~~l~~~R~~vk~ 179 (223)
T PRK05562 153 GEKVKNFLK--KYDDFIEYVTKIRNKAKK 179 (223)
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHh
Confidence 888888882 333466666666666553
No 392
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=23.65 E-value=2.1e+02 Score=28.66 Aligned_cols=102 Identities=21% Similarity=0.278 Sum_probs=63.5
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCCCCchHHHHH
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSDDMPVVTRLH 89 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (476)
|++---|+-|--.=+|+++..|+++| .|.+++.+. ...+++-..+++ ++.- +++ .
T Consensus 96 iLIgGdPGIGKSTLLLQva~~lA~~~--~vLYVsGEE--S~~QiklRA~RL--~~~~--------~~l-----------~ 150 (456)
T COG1066 96 ILIGGDPGIGKSTLLLQVAARLAKRG--KVLYVSGEE--SLQQIKLRADRL--GLPT--------NNL-----------Y 150 (456)
T ss_pred EEEccCCCCCHHHHHHHHHHHHHhcC--cEEEEeCCc--CHHHHHHHHHHh--CCCc--------cce-----------E
Confidence 44555589999999999999999997 788888774 333344444444 2211 111 0
Q ss_pred HHHHHhhcHHHHHHHHhcCCCCEEEECCCcc------------------h---HHHHHHHcCCCeEEEec
Q 046326 90 AIVEESLSKSLKSVLTELCNPNALVIDLFCT------------------Q---AFEICSQLSIPTYSFVT 138 (476)
Q Consensus 90 ~~~~~~~~~~l~~~l~~~~~pDlVI~D~~~~------------------~---~~~~A~~lgIP~v~~~~ 138 (476)
.+.....+ .+.+.+++. +||++|.|.... + -..+|+..||+.+++..
T Consensus 151 l~aEt~~e-~I~~~l~~~-~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~fiVGH 218 (456)
T COG1066 151 LLAETNLE-DIIAELEQE-KPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIFIVGH 218 (456)
T ss_pred EehhcCHH-HHHHHHHhc-CCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEEEEEE
Confidence 01112223 566666666 999999985421 0 12378888999887654
No 393
>PRK08155 acetolactate synthase catalytic subunit; Validated
Probab=23.59 E-value=2.7e+02 Score=29.38 Aligned_cols=25 Identities=8% Similarity=0.216 Sum_probs=20.7
Q ss_pred ceecccCc------hHHHHHHhcCCcEeecc
Q 046326 365 GFLSHCGW------NSTLESICHGVPMIAWP 389 (476)
Q Consensus 365 ~~I~HgG~------~s~~eal~~GvP~l~~P 389 (476)
++++|.|- +.++||...++|+|++.
T Consensus 79 v~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 109 (564)
T PRK08155 79 VCMACSGPGATNLVTAIADARLDSIPLVCIT 109 (564)
T ss_pred EEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 47777774 48999999999999995
No 394
>PRK06487 glycerate dehydrogenase; Provisional
Probab=23.35 E-value=2.2e+02 Score=27.42 Aligned_cols=29 Identities=17% Similarity=0.020 Sum_probs=22.0
Q ss_pred CcEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEE
Q 046326 269 DSVLFAVPGSGGTLTAEQVTEMAWGLEQSKQRFIWV 304 (476)
Q Consensus 269 ~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~i~~ 304 (476)
+.+-.|++|+++ +++++.++..|.+++..
T Consensus 149 ktvgIiG~G~IG-------~~vA~~l~~fgm~V~~~ 177 (317)
T PRK06487 149 KTLGLLGHGELG-------GAVARLAEAFGMRVLIG 177 (317)
T ss_pred CEEEEECCCHHH-------HHHHHHHhhCCCEEEEE
Confidence 458999999987 55677777788887643
No 395
>TIGR00345 arsA arsenite-activated ATPase (arsA). The N-terminal 50 amino acids hits Pfam families NB-ARC and fer4_NifH. residues 4-11 of the seed alignment contain a potential ATP binding site. The function of the gene product is to catalyze the extrusion of the oxyanions arsenite, antimonite and arsenate for detoxification. Some members of this family contain a duplication so the model finds hits twice.
Probab=23.26 E-value=4.1e+02 Score=25.08 Aligned_cols=23 Identities=17% Similarity=0.067 Sum_probs=19.0
Q ss_pred HHHHHHHHhcCCcEEEEEEccCCc
Q 046326 25 LEFAKRLVLNHGVHVSFLVITTNE 48 (476)
Q Consensus 25 l~La~~L~~rG~h~V~~~~~~~~~ 48 (476)
.++|..++++| ++|.++..++..
T Consensus 3 ~a~a~~~a~~g-~~vllv~~Dp~~ 25 (284)
T TIGR00345 3 CATAIRLAEQG-KKVLLVSTDPAH 25 (284)
T ss_pred HHHHHHHHHCC-CeEEEEECCCCC
Confidence 46888999999 999999987633
No 396
>TIGR01285 nifN nitrogenase molybdenum-iron cofactor biosynthesis protein NifN. This protein forms a complex with NifE, and appears as a NifEN in some species. NifEN is a required for producing the molybdenum-iron cofactor of molybdenum-requiring nitrogenases. NifN is closely related to the nitrogenase molybdenum-iron protein beta chain NifK. This model describes most examples of NifN but excludes some cases, such as the putative NifN of Chlorobium tepidum, for which a separate model may be created.
Probab=23.21 E-value=1.4e+02 Score=30.24 Aligned_cols=35 Identities=11% Similarity=0.220 Sum_probs=27.4
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEe
Q 046326 99 SLKSVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFV 137 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~ 137 (476)
.+.+++++. ++|++|.+.. ...+|+++|||++-+.
T Consensus 364 ~l~~~i~~~-~~dliig~s~---~k~~A~~l~ip~ir~g 398 (432)
T TIGR01285 364 DLEDLACAA-GADLLITNSH---GRALAQRLALPLVRAG 398 (432)
T ss_pred HHHHHHhhc-CCCEEEECcc---hHHHHHHcCCCEEEec
Confidence 466677777 9999998763 5679999999998654
No 397
>cd01980 Chlide_reductase_Y Chlide_reductase_Y : Y subunit of chlorophyllide (chlide) reductase (BchY). Chlide reductase participates in photosynthetic pigment synthesis playing a role in the conversion of chlorophylls(Chl) into bacteriochlorophylls (BChl). Chlide reductase catalyzes the reduction of the B-ring of the tetrapyrolle. Chlide reductase is a three subunit enzyme (subunits are designated BchX, BchY and BchZ). The similarity between these three subunits and the subunits for nitrogenase suggests that BchX serves as an electron donor for the BchY-BchY catalytic subunits.
Probab=23.15 E-value=1.3e+02 Score=30.39 Aligned_cols=32 Identities=13% Similarity=0.285 Sum_probs=24.7
Q ss_pred HHHHhcCCCCEEEECCCcchHHHHHHHcCCCeEEEe
Q 046326 102 SVLTELCNPNALVIDLFCTQAFEICSQLSIPTYSFV 137 (476)
Q Consensus 102 ~~l~~~~~pDlVI~D~~~~~~~~~A~~lgIP~v~~~ 137 (476)
+.+++. +||++|... .+..+|+++|||.+-+.
T Consensus 344 ~~~~~~-~pDl~Ig~s---~~~~~a~~~giP~~r~~ 375 (416)
T cd01980 344 AAVEEY-RPDLAIGTT---PLVQYAKEKGIPALYYT 375 (416)
T ss_pred HHHhhc-CCCEEEeCC---hhhHHHHHhCCCEEEec
Confidence 344566 999999874 36669999999998754
No 398
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=23.10 E-value=1.3e+02 Score=31.71 Aligned_cols=33 Identities=6% Similarity=-0.015 Sum_probs=24.6
Q ss_pred CCCcchHHHHHHHcCCCeEEEecccHHHHHHHh
Q 046326 116 DLFCTQAFEICSQLSIPTYSFVTTSVHFFAFIT 148 (476)
Q Consensus 116 D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~ 148 (476)
+.++..++...++..+++.+++++.++.+..+.
T Consensus 151 EWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l 183 (633)
T PF05693_consen 151 EWMAGVGLLYLRKRKPDVATVFTTHATLLGRYL 183 (633)
T ss_dssp SGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHH
T ss_pred hHhHhHHHHHHhccCCCeeEEEEecccchhhHh
Confidence 455556677899999999999999999877654
No 399
>TIGR03446 mycothiol_Mca mycothiol conjugate amidase Mca. Mycobacterium tuberculosis, Corynebacterium glutamicum, and related species use the thiol mycothiol in place of glutathione. This enzyme, homologous to the (dispensible) MshB enzyme of mycothiol biosynthesis, is described as an amidase that acts on conjugates to mycothiol. It is a detoxification enzyme.
Probab=23.10 E-value=3.6e+02 Score=25.61 Aligned_cols=16 Identities=25% Similarity=0.532 Sum_probs=13.8
Q ss_pred HHHHHHHhcCCCCEEEE
Q 046326 99 SLKSVLTELCNPNALVI 115 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~ 115 (476)
.+.++|+++ +||+||+
T Consensus 112 ~L~~iIr~~-~PdvVvT 127 (283)
T TIGR03446 112 PLVRVIREF-RPHVITT 127 (283)
T ss_pred HHHHHHHHc-CCEEEEe
Confidence 678888888 9999996
No 400
>PLN02240 UDP-glucose 4-epimerase
Probab=23.09 E-value=1.3e+02 Score=29.22 Aligned_cols=34 Identities=18% Similarity=0.145 Sum_probs=24.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEE
Q 046326 5 SLQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLV 43 (476)
Q Consensus 5 ~~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~ 43 (476)
+..++|++. |+.|.+- ..|++.|.++| |+|+.+.
T Consensus 3 ~~~~~vlIt--GatG~iG--~~l~~~L~~~g-~~V~~~~ 36 (352)
T PLN02240 3 LMGRTILVT--GGAGYIG--SHTVLQLLLAG-YKVVVID 36 (352)
T ss_pred CCCCEEEEE--CCCChHH--HHHHHHHHHCC-CEEEEEe
Confidence 445666653 5667664 46789999999 9998875
No 401
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=23.04 E-value=3.1e+02 Score=24.50 Aligned_cols=36 Identities=17% Similarity=0.008 Sum_probs=24.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 6 LQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 6 ~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
+.++|++ .|+.|++- ..|++.|.++| |+|++++...
T Consensus 5 ~~~~vlI--tGasg~iG--~~l~~~l~~~g-~~v~~~~~~~ 40 (249)
T PRK12825 5 MGRVALV--TGAARGLG--RAIALRLARAG-ADVVVHYRSD 40 (249)
T ss_pred CCCEEEE--eCCCchHH--HHHHHHHHHCC-CeEEEEeCCC
Confidence 3345555 34456654 57889999999 9987766543
No 402
>PRK12828 short chain dehydrogenase; Provisional
Probab=22.99 E-value=1.6e+02 Score=26.25 Aligned_cols=40 Identities=23% Similarity=0.144 Sum_probs=25.8
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEcc
Q 046326 1 MAVESLQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVIT 45 (476)
Q Consensus 1 m~~~~~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~ 45 (476)
|.+..+.++|++ + ++.|.+ -..+++.|.++| ++|.++...
T Consensus 1 ~~~~~~~k~vlI-t-Gatg~i--G~~la~~l~~~G-~~v~~~~r~ 40 (239)
T PRK12828 1 MEHSLQGKVVAI-T-GGFGGL--GRATAAWLAARG-ARVALIGRG 40 (239)
T ss_pred CCCCCCCCEEEE-E-CCCCcH--hHHHHHHHHHCC-CeEEEEeCC
Confidence 444444444444 3 344655 468889999999 998777643
No 403
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=22.77 E-value=1.7e+02 Score=28.19 Aligned_cols=55 Identities=15% Similarity=0.231 Sum_probs=38.5
Q ss_pred ccCCccceecccCchHHHHHHhc----CCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHh
Q 046326 359 RHPSTGGFLSHCGWNSTLESICH----GVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVM 434 (476)
Q Consensus 359 ~~~~~~~~I~HgG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l 434 (476)
..++ ++|+=||-||+..+... ++|++++ |.-++ |.- -.++.+++.+++.+++
T Consensus 67 ~~~D--lvi~iGGDGTlL~aar~~~~~~iPilGI--------N~G~l-------GFL-------t~~~~~~~~~~l~~l~ 122 (305)
T PRK02649 67 SSMK--FAIVLGGDGTVLSAARQLAPCGIPLLTI--------NTGHL-------GFL-------TEAYLNQLDEAIDQVL 122 (305)
T ss_pred cCcC--EEEEEeCcHHHHHHHHHhcCCCCcEEEE--------eCCCC-------ccc-------ccCCHHHHHHHHHHHH
Confidence 3456 49999999999999774 7788877 22222 211 2456788888888888
Q ss_pred cCC
Q 046326 435 EGE 437 (476)
Q Consensus 435 ~~~ 437 (476)
+++
T Consensus 123 ~g~ 125 (305)
T PRK02649 123 AGQ 125 (305)
T ss_pred cCC
Confidence 765
No 404
>TIGR03445 mycothiol_MshB 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase. Members of this protein family are 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase, the MshB protein of mycothiol biosynthesis in Mycobacterium tuberculosis and related species.
Probab=22.51 E-value=3.1e+02 Score=26.03 Aligned_cols=16 Identities=31% Similarity=0.619 Sum_probs=14.0
Q ss_pred HHHHHHHhcCCCCEEEE
Q 046326 99 SLKSVLTELCNPNALVI 115 (476)
Q Consensus 99 ~l~~~l~~~~~pDlVI~ 115 (476)
.+.++|+++ +||+||+
T Consensus 114 ~l~~~Ir~~-~PdvViT 129 (284)
T TIGR03445 114 ALVAVIREV-RPHVVVT 129 (284)
T ss_pred HHHHHHHHh-CCcEEEe
Confidence 688888888 9999996
No 405
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=22.50 E-value=75 Score=27.28 Aligned_cols=26 Identities=19% Similarity=0.414 Sum_probs=21.0
Q ss_pred ceecccCc------hHHHHHHhcCCcEeeccc
Q 046326 365 GFLSHCGW------NSTLESICHGVPMIAWPL 390 (476)
Q Consensus 365 ~~I~HgG~------~s~~eal~~GvP~l~~P~ 390 (476)
++++|+|- +.++||...++|+|++.-
T Consensus 63 v~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 94 (162)
T cd07037 63 AVVCTSGTAVANLLPAVVEAYYSGVPLLVLTA 94 (162)
T ss_pred EEEECCchHHHHHhHHHHHHHhcCCCEEEEEC
Confidence 47778774 477899999999999943
No 406
>PHA02754 hypothetical protein; Provisional
Probab=22.38 E-value=1.1e+02 Score=20.91 Aligned_cols=25 Identities=16% Similarity=0.298 Sum_probs=18.6
Q ss_pred HHHHHhcCChhHHHHHHHHHHHHHHHHH
Q 046326 429 VVRLVMEGEEGKVMRRRVQELKESASRE 456 (476)
Q Consensus 429 ai~~~l~~~~~~~~~~~a~~l~~~~~~~ 456 (476)
.|.+++.+.+ |++.++++++.+.++
T Consensus 6 Ei~k~i~eK~---Fke~MRelkD~LSe~ 30 (67)
T PHA02754 6 EIPKAIMEKD---FKEAMRELKDILSEA 30 (67)
T ss_pred HHHHHHHHhH---HHHHHHHHHHHHhhC
Confidence 3455566777 999999999987654
No 407
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=22.36 E-value=1.7e+02 Score=27.86 Aligned_cols=55 Identities=15% Similarity=0.124 Sum_probs=37.7
Q ss_pred ccCCccceecccCchHHHHHHh----cCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHh
Q 046326 359 RHPSTGGFLSHCGWNSTLESIC----HGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVM 434 (476)
Q Consensus 359 ~~~~~~~~I~HgG~~s~~eal~----~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l 434 (476)
..++ ++|+=||-||+..++. +++|++.+-. -++ |. - ..++.+++.+++.+++
T Consensus 62 ~~~d--~vi~lGGDGT~L~aa~~~~~~~~Pilgin~--------G~l-----GF--l-------~~~~~~~~~~~l~~i~ 117 (292)
T PRK03378 62 QQAD--LAIVVGGDGNMLGAARVLARYDIKVIGINR--------GNL-----GF--L-------TDLDPDNALQQLSDVL 117 (292)
T ss_pred CCCC--EEEEECCcHHHHHHHHHhcCCCCeEEEEEC--------CCC-----Cc--c-------cccCHHHHHHHHHHHH
Confidence 3456 4999999999999975 3667776622 112 22 1 2456788899999988
Q ss_pred cCC
Q 046326 435 EGE 437 (476)
Q Consensus 435 ~~~ 437 (476)
+++
T Consensus 118 ~g~ 120 (292)
T PRK03378 118 EGH 120 (292)
T ss_pred cCC
Confidence 754
No 408
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=22.31 E-value=67 Score=28.54 Aligned_cols=33 Identities=27% Similarity=0.403 Sum_probs=24.2
Q ss_pred CCCEEE-ECCCcc-hHHHHHHHcCCCeEEEecccH
Q 046326 109 NPNALV-IDLFCT-QAFEICSQLSIPTYSFVTTSV 141 (476)
Q Consensus 109 ~pDlVI-~D~~~~-~~~~~A~~lgIP~v~~~~~~~ 141 (476)
.||+|| .|...- -++.=|.++|||+|.++-+.+
T Consensus 108 ~Pdlliv~dp~~~~~Av~EA~~l~IP~Iai~DTn~ 142 (196)
T TIGR01012 108 EPEVVVVTDPRADHQALKEASEVGIPIVALCDTDN 142 (196)
T ss_pred CCCEEEEECCccccHHHHHHHHcCCCEEEEeeCCC
Confidence 789988 565433 355579999999999876554
No 409
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=22.24 E-value=1.6e+02 Score=25.95 Aligned_cols=38 Identities=16% Similarity=0.152 Sum_probs=29.3
Q ss_pred CCEEEEEcC--CCccCHHHHHHHHHHHHhcCCcEEEEEEcc
Q 046326 7 QPHVAVLPS--PGLGHLIPLLEFAKRLVLNHGVHVSFLVIT 45 (476)
Q Consensus 7 ~~rIll~~~--p~~GHi~P~l~La~~L~~rG~h~V~~~~~~ 45 (476)
++|++.++. ++.|-..-...||..|+++| ++|.++=..
T Consensus 16 ~~kvI~v~s~kgG~GKTt~a~~LA~~la~~G-~rVllID~D 55 (204)
T TIGR01007 16 EIKVLLITSVKPGEGKSTTSANIAVAFAQAG-YKTLLIDGD 55 (204)
T ss_pred CCcEEEEecCCCCCCHHHHHHHHHHHHHhCC-CeEEEEeCC
Confidence 355544444 57788889999999999999 999887554
No 410
>COG2874 FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=22.09 E-value=1.5e+02 Score=26.91 Aligned_cols=29 Identities=21% Similarity=0.363 Sum_probs=23.2
Q ss_pred CccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 17 GLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 17 ~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
+.|---=-..++.-+...| |+|++++++.
T Consensus 38 ~tGKSvLsqr~~YG~L~~g-~~v~yvsTe~ 66 (235)
T COG2874 38 GTGKSVLSQRFAYGFLMNG-YRVTYVSTEL 66 (235)
T ss_pred CccHHHHHHHHHHHHHhCC-ceEEEEEech
Confidence 5566666678888888998 9999999874
No 411
>PRK13234 nifH nitrogenase reductase; Reviewed
Probab=22.09 E-value=1.5e+02 Score=28.18 Aligned_cols=40 Identities=13% Similarity=0.057 Sum_probs=32.1
Q ss_pred CCCE-EEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 6 LQPH-VAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 6 ~~~r-Ill~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
++|| |.|+.=|+-|-..-...||..|++.| ++|.++-.++
T Consensus 2 ~~~~~iai~~KGGvGKTt~~~nLa~~la~~g-~kVLliD~D~ 42 (295)
T PRK13234 2 SKLRQIAFYGKGGIGKSTTSQNTLAALVEMG-QKILIVGCDP 42 (295)
T ss_pred CcceEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEeccc
Confidence 4555 45555578899999999999999999 9999986553
No 412
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=22.08 E-value=1e+02 Score=30.54 Aligned_cols=71 Identities=15% Similarity=0.186 Sum_probs=46.6
Q ss_pred ccceecccCchHHHHHHhcC-----------------CcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHH
Q 046326 363 TGGFLSHCGWNSTLESICHG-----------------VPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREE 425 (476)
Q Consensus 363 ~~~~I~HgG~~s~~eal~~G-----------------vP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~ 425 (476)
-++++|.||..+...|+.++ .|.+.++-.. ++-+.+-+ ..+|+|++.-.-.++..++.++
T Consensus 104 ~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~a-H~S~~Kaa--~~lGlg~~~I~~~~~~~md~~~ 180 (373)
T PF00282_consen 104 AGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQA-HYSIEKAA--RILGLGVRKIPTDEDGRMDIEA 180 (373)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS--THHHHHH--HHTTSEEEEE-BBTTSSB-HHH
T ss_pred CceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccccc-ccHHHHhc--ceeeeEEEEecCCcchhhhHHH
Confidence 34899999988887776332 4567665544 45555555 6789995544324456789999
Q ss_pred HHHHHHHHhcC
Q 046326 426 IERVVRLVMEG 436 (476)
Q Consensus 426 l~~ai~~~l~~ 436 (476)
|+++|.+...+
T Consensus 181 L~~~l~~~~~~ 191 (373)
T PF00282_consen 181 LEKALEKDIAN 191 (373)
T ss_dssp HHHHHHHHHHT
T ss_pred hhhhhcccccc
Confidence 99999887544
No 413
>PRK13010 purU formyltetrahydrofolate deformylase; Reviewed
Probab=22.03 E-value=6.9e+02 Score=23.75 Aligned_cols=58 Identities=14% Similarity=0.097 Sum_probs=40.0
Q ss_pred cccCchHHHHHHhcCCcEeecccc--chhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHh
Q 046326 368 SHCGWNSTLESICHGVPMIAWPLY--AEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVM 434 (476)
Q Consensus 368 ~HgG~~s~~eal~~GvP~l~~P~~--~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l 434 (476)
...|.+....++.+|+...++-.+ .+..+.+.-+ .+.-+- +.. +-|.++|.+.+.++-
T Consensus 204 ~f~G~~~~~~ai~~G~k~tG~TvH~v~~~lD~GpII--~Q~~v~--V~~-----~dt~e~L~~r~~~~E 263 (289)
T PRK13010 204 GFKGARPYHQAHARGVKLIGATAHFVTDDLDEGPII--EQDVER--VDH-----SYSPEDLVAKGRDVE 263 (289)
T ss_pred CCCCCCHHHHHHHcCCCeEEEEEEEEcCCCCCCCce--EEEEEE--cCC-----CCCHHHHHHHHHHHH
Confidence 346889999999999998887753 4556666666 443333 333 347888888887653
No 414
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=21.89 E-value=3.1e+02 Score=22.70 Aligned_cols=39 Identities=8% Similarity=-0.061 Sum_probs=34.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 7 QPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 7 ~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
+.+|++.+..+-+|-.=---++..|.++| ++|..+....
T Consensus 1 ~~~vvigtv~~D~HdiGk~iv~~~l~~~G-feVi~LG~~v 39 (134)
T TIGR01501 1 KKTIVLGVIGSDCHAVGNKILDHAFTNAG-FNVVNLGVLS 39 (134)
T ss_pred CCeEEEEEecCChhhHhHHHHHHHHHHCC-CEEEECCCCC
Confidence 35899999999999999999999999999 9999987664
No 415
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=21.89 E-value=1.1e+02 Score=28.93 Aligned_cols=31 Identities=19% Similarity=0.254 Sum_probs=25.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEc
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVI 44 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~ 44 (476)
|+|+++-.|..| ..+|..|++.| |+|+++..
T Consensus 1 m~I~IiG~G~~G-----~~~a~~L~~~g-~~V~~~~r 31 (304)
T PRK06522 1 MKIAILGAGAIG-----GLFGAALAQAG-HDVTLVAR 31 (304)
T ss_pred CEEEEECCCHHH-----HHHHHHHHhCC-CeEEEEEC
Confidence 478888777766 56888899999 99999975
No 416
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=21.88 E-value=1.1e+02 Score=29.45 Aligned_cols=34 Identities=18% Similarity=0.116 Sum_probs=28.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEcc
Q 046326 6 LQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVIT 45 (476)
Q Consensus 6 ~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~ 45 (476)
.+|+|.|+-.|..|. ++|+.|+++| |+|++....
T Consensus 3 ~~m~I~iiG~G~~G~-----~lA~~l~~~G-~~V~~~~r~ 36 (308)
T PRK14619 3 QPKTIAILGAGAWGS-----TLAGLASANG-HRVRVWSRR 36 (308)
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCC-CEEEEEeCC
Confidence 468899998887774 7899999999 999987644
No 417
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=21.66 E-value=76 Score=28.42 Aligned_cols=33 Identities=24% Similarity=0.338 Sum_probs=24.1
Q ss_pred CCCEEE-ECCCcc-hHHHHHHHcCCCeEEEecccH
Q 046326 109 NPNALV-IDLFCT-QAFEICSQLSIPTYSFVTTSV 141 (476)
Q Consensus 109 ~pDlVI-~D~~~~-~~~~~A~~lgIP~v~~~~~~~ 141 (476)
.||+|| .|...- -++.=|.++|||+|.++-+.+
T Consensus 114 ~Pdliiv~dp~~~~~AI~EA~kl~IP~IaivDTn~ 148 (204)
T PRK04020 114 EPDVVVVTDPRGDAQAVKEAIEVGIPVVALCDTDN 148 (204)
T ss_pred CCCEEEEECCcccHHHHHHHHHhCCCEEEEEeCCC
Confidence 889988 465433 345578999999999876554
No 418
>cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH). CODH from Rhodospirillum rubrum catalyzes the reversible oxidation of CO to CO2. CODH contains a nickel-iron-sulfur cluster (C-center) and an iron-sulfur cluster (B-center). CO oxidation occurs at the C-center. Three accessory proteins encoded by cooCTJ genes are involved in nickel incorporation into a nickel site. CooC functions as a nickel insertase that mobilizes nickel to apoCODH using energy released from ATP hydrolysis. CooC is a homodimer and has NTPase activities. Mutation at the P-loop abolishs its function.
Probab=21.57 E-value=2e+02 Score=22.99 Aligned_cols=37 Identities=16% Similarity=0.111 Sum_probs=32.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 9 HVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 9 rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
||++..-++.|-......|++.|+++| .+|.++-.+.
T Consensus 1 ~i~~~GkgG~GKTt~a~~la~~l~~~g-~~V~~id~D~ 37 (116)
T cd02034 1 KIAITGKGGVGKTTIAALLARYLAEKG-KPVLAIDADP 37 (116)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHCC-CcEEEEECCc
Confidence 478888899999999999999999998 8888887664
No 419
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=21.57 E-value=1.6e+02 Score=26.25 Aligned_cols=33 Identities=18% Similarity=0.128 Sum_probs=25.9
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEE
Q 046326 4 ESLQPHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFL 42 (476)
Q Consensus 4 ~~~~~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~ 42 (476)
+.+.++|+++-++..| ..+|+.|.+.| |+|++.
T Consensus 25 ~l~gk~v~I~G~G~vG-----~~~A~~L~~~G-~~Vvv~ 57 (200)
T cd01075 25 SLEGKTVAVQGLGKVG-----YKLAEHLLEEG-AKLIVA 57 (200)
T ss_pred CCCCCEEEEECCCHHH-----HHHHHHHHHCC-CEEEEE
Confidence 3556889998887554 57899999999 999854
No 420
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=21.44 E-value=1.4e+02 Score=23.63 Aligned_cols=35 Identities=26% Similarity=-0.067 Sum_probs=30.7
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEcc
Q 046326 10 VAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVIT 45 (476)
Q Consensus 10 Ill~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~ 45 (476)
++..+.++..|......++..|+++| ++|.+....
T Consensus 2 ~l~~~~~~~~h~lg~~~~~~~l~~~G-~~v~~l~~~ 36 (125)
T cd02065 2 VLGATVGGDVHDIGKNIVAIALRDNG-FEVIDLGVD 36 (125)
T ss_pred EEEEEcCCchhhHHHHHHHHHHHHCC-CEEEEcCCC
Confidence 67778889999999999999999999 999988644
No 421
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include eukaryotic ATP-dependent phosphofructokinases. These have evolved from the bacterial PFKs by gene duplication and fusion events and exhibit complex allosteric behavior.
Probab=21.40 E-value=2.4e+02 Score=30.95 Aligned_cols=119 Identities=11% Similarity=0.072 Sum_probs=0.0
Q ss_pred CCCCCCEEEEEcCCCc-cCHHHHH-HHHHHHHhcCCcEEEEEEccCCcchhhhhhhhhcCCCCceEEEcCCCCCCCCCCC
Q 046326 3 VESLQPHVAVLPSPGL-GHLIPLL-EFAKRLVLNHGVHVSFLVITTNEASAAKNNLLRSLPHGLDVVDLPPVDVSAVTSD 80 (476)
Q Consensus 3 ~~~~~~rIll~~~p~~-GHi~P~l-~La~~L~~rG~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (476)
++.+++||++++.|+. .=+|+.+ ++.+.-..+| |+|.-+-.. +..++ .-++..+.....++....
T Consensus 385 ~~~~~~~IaIltsGG~apGmNaairavv~~a~~~g-~~v~gi~~G-------~~GL~-----~~~~~~l~~~~v~~~~~~ 451 (762)
T cd00764 385 PEKTNLNIAIVNVGAPAAGMNAAVRSAVRYGLAHG-HRPYAIYDG-------FEGLA-----KGQIVELGWIDVGGWTGR 451 (762)
T ss_pred CcccccEEEEEecCCCchhHHHHHHHHHHHHHHCC-CEEEEEecC-------HHHhc-----CCCcccCCHHHHHHHHhC
Q ss_pred CCchHHHHHHHHHHhhcHHHHHHHHhcCCCCEEEE---CCCcchHHHHHHH------cCCCeEEE
Q 046326 81 DMPVVTRLHAIVEESLSKSLKSVLTELCNPNALVI---DLFCTQAFEICSQ------LSIPTYSF 136 (476)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~pDlVI~---D~~~~~~~~~A~~------lgIP~v~~ 136 (476)
+......-+........ .+.+.|++. +.|.+|+ |-.+..+..+++. ++||+|.+
T Consensus 452 GGt~LGT~R~~~~~~~~-~i~~~l~~~-~Id~LivIGGdgs~~~a~~L~~~~~~y~~~~i~vVgI 514 (762)
T cd00764 452 GGSELGTKRTLPKKDLE-TIAYNFQKY-GIDGLIIVGGFEAYKGLLQLREAREQYEEFCIPMVLI 514 (762)
T ss_pred CcccccccCCCcHHHHH-HHHHHHHHc-CCCEEEEECChhHHHHHHHHHHHHhhCCCCCccEEEe
No 422
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=21.36 E-value=1.9e+02 Score=27.61 Aligned_cols=55 Identities=22% Similarity=0.168 Sum_probs=38.4
Q ss_pred ccCCccceecccCchHHHHHHh----cCCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHh
Q 046326 359 RHPSTGGFLSHCGWNSTLESIC----HGVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVM 434 (476)
Q Consensus 359 ~~~~~~~~I~HgG~~s~~eal~----~GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l 434 (476)
..++ ++|+=||-||+..+.. .++|++++- .-++ |.- -.++.+++.+++.+++
T Consensus 67 ~~~D--~vi~lGGDGT~L~aa~~~~~~~~PilGIN--------~G~l-------GFL-------~~~~~~~~~~~l~~i~ 122 (296)
T PRK04539 67 QYCD--LVAVLGGDGTFLSVAREIAPRAVPIIGIN--------QGHL-------GFL-------TQIPREYMTDKLLPVL 122 (296)
T ss_pred cCCC--EEEEECCcHHHHHHHHHhcccCCCEEEEe--------cCCC-------eEe-------eccCHHHHHHHHHHHH
Confidence 3566 4999999999999975 377888773 2222 222 1456788888888888
Q ss_pred cCC
Q 046326 435 EGE 437 (476)
Q Consensus 435 ~~~ 437 (476)
+++
T Consensus 123 ~g~ 125 (296)
T PRK04539 123 EGK 125 (296)
T ss_pred cCC
Confidence 754
No 423
>PF07015 VirC1: VirC1 protein; InterPro: IPR009744 This family consists of several bacterial VirC1 proteins. In Agrobacterium tumefaciens, a cis-active 24-base-pair sequence adjacent to the right border of the T-DNA, called overdrive, stimulates tumour formation by increasing the level of T-DNA processing. It is thought that the virC operon, which enhances T-DNA processing probably, does so because the VirC1 protein interacts with overdrive. It has now been shown that the virC1 gene product binds to overdrive but not to the right border of T-DNA [].
Probab=21.35 E-value=2.6e+02 Score=25.61 Aligned_cols=45 Identities=18% Similarity=0.240 Sum_probs=34.6
Q ss_pred EEEEcC-CCccCHHHHHHHHHHHHhcCCcEEEEEEccCCcchhhhhh
Q 046326 10 VAVLPS-PGLGHLIPLLEFAKRLVLNHGVHVSFLVITTNEASAAKNN 55 (476)
Q Consensus 10 Ill~~~-p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~~~~~~~~~~ 55 (476)
|.+++. |+.|-..-.+.||.+|+++| -.|+++=.++......+.+
T Consensus 4 Itf~s~KGGaGKTT~~~~LAs~la~~G-~~V~lIDaDpn~pl~~W~~ 49 (231)
T PF07015_consen 4 ITFASSKGGAGKTTAAMALASELAARG-ARVALIDADPNQPLAKWAE 49 (231)
T ss_pred EEEecCCCCCcHHHHHHHHHHHHHHCC-CeEEEEeCCCCCcHHHHHH
Confidence 444444 89999999999999999999 8999988776444444433
No 424
>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family. The E. coli member of this family, YegS has been purified and shown to have phosphatidylglycerol kinase activity. The member from M. tuberculosis, Rv2252, has diacylglycerol kinase activity. BmrU from B. subtilis is in an operon with multidrug efflux transporter Bmr, but is uncharacterized.
Probab=21.30 E-value=3.7e+02 Score=25.29 Aligned_cols=26 Identities=19% Similarity=0.326 Sum_probs=19.3
Q ss_pred ceecccCchHHHHHHhc-----CCcEe-eccc
Q 046326 365 GFLSHCGWNSTLESICH-----GVPMI-AWPL 390 (476)
Q Consensus 365 ~~I~HgG~~s~~eal~~-----GvP~l-~~P~ 390 (476)
.+|.-||=||+.|++.. ..|.+ ++|.
T Consensus 60 ~ivv~GGDGTl~~v~~~l~~~~~~~~lgiiP~ 91 (293)
T TIGR00147 60 TVIAGGGDGTINEVVNALIQLDDIPALGILPL 91 (293)
T ss_pred EEEEECCCChHHHHHHHHhcCCCCCcEEEEcC
Confidence 59999999999996643 34445 4886
No 425
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=21.25 E-value=3e+02 Score=28.39 Aligned_cols=88 Identities=13% Similarity=0.122 Sum_probs=55.4
Q ss_pred ccCchHHHHHHhcCCcEeeccccc--h----hhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHhcCChhHHH
Q 046326 369 HCGWNSTLESICHGVPMIAWPLYA--E----QRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVMEGEEGKVM 442 (476)
Q Consensus 369 HgG~~s~~eal~~GvP~l~~P~~~--D----Q~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~ 442 (476)
-||.+ =++|+++|++-|+.+..+ | -..++ . ...|.|..... .+++++..++++.+.= |
T Consensus 380 PcGL~-ql~amryGtvpIv~~tGGLadTV~~~~~~~--~--~~~gtGf~f~~------~~~~~l~~al~rA~~~-----y 443 (487)
T COG0297 380 PCGLT-QLYAMRYGTLPIVRETGGLADTVVDRNEWL--I--QGVGTGFLFLQ------TNPDHLANALRRALVL-----Y 443 (487)
T ss_pred CCcHH-HHHHHHcCCcceEcccCCccceecCccchh--c--cCceeEEEEec------CCHHHHHHHHHHHHHH-----h
Confidence 37864 567999999888888743 3 22222 3 45577887766 4999999999987742 3
Q ss_pred HHHHHHHHHHHHHHhccCCChHHHHHHHHH
Q 046326 443 RRRVQELKESASRELGDGGSSSDSLASFIK 472 (476)
Q Consensus 443 ~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 472 (476)
+.....++.....++...-|-++...+.++
T Consensus 444 ~~~~~~w~~~~~~~m~~d~sw~~sa~~y~~ 473 (487)
T COG0297 444 RAPPLLWRKVQPNAMGADFSWDLSAKEYVE 473 (487)
T ss_pred hCCHHHHHHHHHhhcccccCchhHHHHHHH
Confidence 333333555555555445555555555444
No 426
>PRK06222 ferredoxin-NADP(+) reductase subunit alpha; Reviewed
Probab=20.88 E-value=2e+02 Score=27.10 Aligned_cols=36 Identities=17% Similarity=0.069 Sum_probs=29.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
.+++++..++- +.|++.++++|.++| ++|+++....
T Consensus 99 ~~~llIaGGiG--iaPl~~l~~~l~~~~-~~v~l~~g~r 134 (281)
T PRK06222 99 GTVVCVGGGVG--IAPVYPIAKALKEAG-NKVITIIGAR 134 (281)
T ss_pred CeEEEEeCcCc--HHHHHHHHHHHHHCC-CeEEEEEecC
Confidence 47888776552 889999999999998 8998876553
No 427
>CHL00072 chlL photochlorophyllide reductase subunit L
Probab=20.85 E-value=1.7e+02 Score=27.81 Aligned_cols=38 Identities=16% Similarity=0.093 Sum_probs=33.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
|+|+++-=|+-|-..-.+.||..|+++| ++|.++-.++
T Consensus 1 m~ia~~gKGGVGKTTta~nLA~~La~~G-~rVLlID~Dp 38 (290)
T CHL00072 1 MKLAVYGKGGIGKSTTSCNISIALARRG-KKVLQIGCDP 38 (290)
T ss_pred CeEEEECCCCCcHHHHHHHHHHHHHHCC-CeEEEEeccC
Confidence 4688888899999999999999999999 9999887664
No 428
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G ....
Probab=20.70 E-value=1.2e+02 Score=21.51 Aligned_cols=20 Identities=20% Similarity=0.061 Sum_probs=16.4
Q ss_pred HHHHHHHHhcCCcEEEEEEcc
Q 046326 25 LEFAKRLVLNHGVHVSFLVIT 45 (476)
Q Consensus 25 l~La~~L~~rG~h~V~~~~~~ 45 (476)
+..|..|+++| ++|+++=..
T Consensus 9 l~aA~~L~~~g-~~v~v~E~~ 28 (68)
T PF13450_consen 9 LAAAYYLAKAG-YRVTVFEKN 28 (68)
T ss_dssp HHHHHHHHHTT-SEEEEEESS
T ss_pred HHHHHHHHHCC-CcEEEEecC
Confidence 67899999998 999987543
No 429
>COG0678 AHP1 Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=20.64 E-value=3e+02 Score=23.29 Aligned_cols=39 Identities=21% Similarity=0.214 Sum_probs=29.4
Q ss_pred CCCCEEEEEcCCC-------ccCHHHHHHHHHHHHhcCCcEEEEEE
Q 046326 5 SLQPHVAVLPSPG-------LGHLIPLLEFAKRLVLNHGVHVSFLV 43 (476)
Q Consensus 5 ~~~~rIll~~~p~-------~GHi~P~l~La~~L~~rG~h~V~~~~ 43 (476)
-+.++|+++..|+ ..|+--++.++.+++++|--+|.+++
T Consensus 35 f~gKkVvlf~lPGAFTPTCS~~hlPgY~~~~d~f~~kGVD~I~cVS 80 (165)
T COG0678 35 FKGKKVVLFSLPGAFTPTCSSSHLPGYLELADEFKAKGVDEIYCVS 80 (165)
T ss_pred cCCCEEEEEeCCCccCCCcccccCccHHHHHHHHHHcCCceEEEEE
Confidence 4567888888763 47999999999999999922444444
No 430
>COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=20.63 E-value=1.3e+02 Score=31.56 Aligned_cols=44 Identities=32% Similarity=0.452 Sum_probs=32.1
Q ss_pred CCEEEEEcC-------CCccCHHHHHH---HHHHHHhcCCcEEEEEEccCCcchh
Q 046326 7 QPHVAVLPS-------PGLGHLIPLLE---FAKRLVLNHGVHVSFLVITTNEASA 51 (476)
Q Consensus 7 ~~rIll~~~-------p~~GHi~P~l~---La~~L~~rG~h~V~~~~~~~~~~~~ 51 (476)
..++++.+. |=.||+.+++. +|+-++-+| |+|.|++.++....+
T Consensus 4 ~~~~~VTtalpY~Ng~~HlGH~~~~l~ADv~aRy~Rl~G-~~v~fvtGtDeHGt~ 57 (558)
T COG0143 4 MKKILVTTALPYPNGPPHLGHLYTYLAADVYARYLRLRG-YEVFFLTGTDEHGTK 57 (558)
T ss_pred CCcEEEecCCCCCCCCcchhhHHHHHHHHHHHHHHHhcC-CeEEEEeccCCCCCH
Confidence 345655544 23499998874 788889999 999999998744444
No 431
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=20.58 E-value=1.9e+02 Score=27.84 Aligned_cols=55 Identities=16% Similarity=0.169 Sum_probs=38.5
Q ss_pred ccCCccceecccCchHHHHHHhc----CCcEeeccccchhhhhhhhhcceeeeeEEeccccCCCCCcCHHHHHHHHHHHh
Q 046326 359 RHPSTGGFLSHCGWNSTLESICH----GVPMIAWPLYAEQRMNAAMLTAEETGVAVKPETEPGKKVIGREEIERVVRLVM 434 (476)
Q Consensus 359 ~~~~~~~~I~HgG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~~~~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~~l 434 (476)
..++ ++|+=||-||+..++.. ++|++++.. -++ |.- -.+..+++.+++.+++
T Consensus 71 ~~~D--~vi~lGGDGT~L~aar~~~~~~~PilGIN~--------G~l-------GFL-------~~~~~~~~~~~l~~i~ 126 (306)
T PRK03372 71 DGCE--LVLVLGGDGTILRAAELARAADVPVLGVNL--------GHV-------GFL-------AEAEAEDLDEAVERVV 126 (306)
T ss_pred cCCC--EEEEEcCCHHHHHHHHHhccCCCcEEEEec--------CCC-------cee-------ccCCHHHHHHHHHHHH
Confidence 3456 49999999999998764 778887743 122 222 1356788888888888
Q ss_pred cCC
Q 046326 435 EGE 437 (476)
Q Consensus 435 ~~~ 437 (476)
+++
T Consensus 127 ~g~ 129 (306)
T PRK03372 127 DRD 129 (306)
T ss_pred cCC
Confidence 765
No 432
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=20.49 E-value=6.2e+02 Score=22.59 Aligned_cols=34 Identities=18% Similarity=0.035 Sum_probs=28.7
Q ss_pred EEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEcc
Q 046326 11 AVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVIT 45 (476)
Q Consensus 11 ll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~ 45 (476)
+++.....|-..-+|.-++....+| -.|.+..+.
T Consensus 8 ~i~gpM~SGKT~eLl~r~~~~~~~g-~~v~vfkp~ 41 (201)
T COG1435 8 FIYGPMFSGKTEELLRRARRYKEAG-MKVLVFKPA 41 (201)
T ss_pred EEEccCcCcchHHHHHHHHHHHHcC-CeEEEEecc
Confidence 4555568899999999999999999 888888766
No 433
>PRK00039 ruvC Holliday junction resolvase; Reviewed
Probab=20.49 E-value=2.6e+02 Score=24.05 Aligned_cols=46 Identities=13% Similarity=0.311 Sum_probs=31.3
Q ss_pred HHHhhcHHHHHHHHhcCCCCEEEECCCcch--------------H-HHHHHHcCCCeEEEecc
Q 046326 92 VEESLSKSLKSVLTELCNPNALVIDLFCTQ--------------A-FEICSQLSIPTYSFVTT 139 (476)
Q Consensus 92 ~~~~~~~~l~~~l~~~~~pDlVI~D~~~~~--------------~-~~~A~~lgIP~v~~~~~ 139 (476)
+..... .+.+++++. +||.++.+..++. + ..++...|||+.-+.+.
T Consensus 46 l~~I~~-~l~~~i~~~-~Pd~vaiE~~f~~~n~~sa~~l~~arGvi~la~~~~~ipv~ey~P~ 106 (164)
T PRK00039 46 LKQIYD-GLSELIDEY-QPDEVAIEEVFFNKNPQSALKLGQARGVAILAAAQRGLPVAEYTPL 106 (164)
T ss_pred HHHHHH-HHHHHHHHh-CCCEEEEehhhhccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHH
Confidence 333445 789999998 9999987644322 1 12677889998877554
No 434
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated
Probab=20.44 E-value=7.5e+02 Score=26.20 Aligned_cols=27 Identities=11% Similarity=0.161 Sum_probs=22.0
Q ss_pred ccceecccCc------hHHHHHHhcCCcEeecc
Q 046326 363 TGGFLSHCGW------NSTLESICHGVPMIAWP 389 (476)
Q Consensus 363 ~~~~I~HgG~------~s~~eal~~GvP~l~~P 389 (476)
.+++++|.|- +.+++|...++|+|++.
T Consensus 69 ~gv~~~t~GPG~~n~~~gi~~A~~~~~Pvl~I~ 101 (588)
T PRK07525 69 MGMVIGQNGPGITNFVTAVATAYWAHTPVVLVT 101 (588)
T ss_pred CEEEEEcCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 3458888874 47889999999999995
No 435
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=20.41 E-value=1.6e+02 Score=27.32 Aligned_cols=38 Identities=13% Similarity=0.030 Sum_probs=32.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 8 PHVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 8 ~rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
|+|+++-=|+-|-..-.+.||..|+++| ++|.++=.++
T Consensus 1 ~~i~~~gKGGVGKTT~~~nLA~~La~~g-~rVLliD~D~ 38 (268)
T TIGR01281 1 MILAVYGKGGIGKSTTSSNLSVAFAKLG-KRVLQIGCDP 38 (268)
T ss_pred CEEEEEcCCcCcHHHHHHHHHHHHHhCC-CeEEEEecCc
Confidence 5688886688899999999999999999 9999885543
No 436
>COG2433 Uncharacterized conserved protein [Function unknown]
Probab=20.35 E-value=5e+02 Score=27.40 Aligned_cols=29 Identities=17% Similarity=0.221 Sum_probs=18.7
Q ss_pred HHHHHHHhhcHHHHHHHHhcC-CCCEEEECC
Q 046326 88 LHAIVEESLSKSLKSVLTELC-NPNALVIDL 117 (476)
Q Consensus 88 ~~~~~~~~~~~~l~~~l~~~~-~pDlVI~D~ 117 (476)
....+..... .+++.|++.. .+|+.+...
T Consensus 162 vh~av~~~~r-eIee~L~~agldyDl~vr~~ 191 (652)
T COG2433 162 VHGAVKRVVR-EIEEKLDEAGLDYDLEVRES 191 (652)
T ss_pred HHHHHHHHHH-HHHHHHHhcCCCceeEEeec
Confidence 3344444555 6777777655 889988754
No 437
>PRK12743 oxidoreductase; Provisional
Probab=20.25 E-value=3.4e+02 Score=24.70 Aligned_cols=33 Identities=12% Similarity=0.086 Sum_probs=23.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEcc
Q 046326 9 HVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVIT 45 (476)
Q Consensus 9 rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~ 45 (476)
+.++++.++ |.+- ..+++.|.++| |+|.++...
T Consensus 3 k~vlItGas-~giG--~~~a~~l~~~G-~~V~~~~~~ 35 (256)
T PRK12743 3 QVAIVTASD-SGIG--KACALLLAQQG-FDIGITWHS 35 (256)
T ss_pred CEEEEECCC-chHH--HHHHHHHHHCC-CEEEEEeCC
Confidence 355666654 3333 67999999999 999877544
No 438
>PRK02842 light-independent protochlorophyllide reductase subunit N; Provisional
Probab=20.24 E-value=6e+02 Score=25.68 Aligned_cols=33 Identities=15% Similarity=0.067 Sum_probs=21.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHh-cCCcEEEEEEcc
Q 046326 7 QPHVAVLPSPGLGHLIPLLEFAKRLVL-NHGVHVSFLVIT 45 (476)
Q Consensus 7 ~~rIll~~~p~~GHi~P~l~La~~L~~-rG~h~V~~~~~~ 45 (476)
.+|++++.-+ .-.+.+++.|.+ .| -+|..+.+.
T Consensus 290 Gkrvai~g~~-----~~~~~la~~L~eelG-m~~v~v~t~ 323 (427)
T PRK02842 290 GKRVFFLPDS-----QLEIPLARFLSRECG-MELVEVGTP 323 (427)
T ss_pred CcEEEEECCc-----hhHHHHHHHHHHhCC-CEEEEeCCC
Confidence 4577776433 345677888887 88 777666544
No 439
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=20.06 E-value=1.2e+02 Score=26.67 Aligned_cols=36 Identities=14% Similarity=0.156 Sum_probs=27.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhcCCcEEEEEEccC
Q 046326 9 HVAVLPSPGLGHLIPLLEFAKRLVLNHGVHVSFLVITT 46 (476)
Q Consensus 9 rIll~~~p~~GHi~P~l~La~~L~~rG~h~V~~~~~~~ 46 (476)
||++--.|+-|-+.- ..|.++|+++| ++|.++.++.
T Consensus 1 ~illgvtGsiaa~ka-~~lir~L~~~g-~~V~vv~T~~ 36 (181)
T TIGR00421 1 RIVVAMTGASGVIYG-IRLLEVLKEAG-VEVHLVISDW 36 (181)
T ss_pred CEEEEEECHHHHHHH-HHHHHHHHHCC-CEEEEEECcc
Confidence 355555556666555 79999999999 9999998774
Done!