BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046331
(249 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B6SFA4|MAA3_ARATH Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana GN=MAA3 PE=2
SV=1
Length = 818
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 47/63 (74%), Gaps = 6/63 (9%)
Query: 73 EVEFVL--FHKLASMYPELMSSSQLAFISPYRHQVKQFQEWFKETFG----ELVDMTTTD 126
EVEFVL +H+L +MYPEL SSSQLA ISPY +QVK F++ FKE FG ++VD+ T D
Sbjct: 623 EVEFVLLIYHRLVTMYPELKSSSQLAIISPYNYQVKTFKDRFKEMFGTEAEKVVDINTVD 682
Query: 127 GCQ 129
G Q
Sbjct: 683 GFQ 685
>sp|Q39547|CUCM1_CUCME Cucumisin OS=Cucumis melo PE=1 SV=1
Length = 731
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 59/106 (55%), Gaps = 23/106 (21%)
Query: 155 SHTSSTAAG---------------KRGKDVSFSRTGKKK-------QISEMLLMMHDATT 192
+HT+STAAG RG V +R K +++L DA
Sbjct: 206 THTASTAAGGLVSQANLYGLGLGTARGG-VPLARIAAYKVCWNDGCSDTDILAAYDDAIA 264
Query: 193 VGVDLITISIGHAHALNFSDESISIGSFHAMKNGILTSNSAGNRGP 238
GVD+I++S+G A+ ++ ++I+IGSFHA++ GILTSNSAGN GP
Sbjct: 265 DGVDIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGP 310
>sp|Q9LLL8|XSP1_ARATH Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1
Length = 749
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 25/30 (83%)
Query: 209 NFSDESISIGSFHAMKNGILTSNSAGNRGP 238
++S +SIS+GSFHAM+ GILT SAGN GP
Sbjct: 287 DYSSDSISVGSFHAMRKGILTVASAGNDGP 316
>sp|O65351|SUBL_ARATH Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1
Length = 757
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 181 SEMLLMMHDATTVGVDLITISIGHAHALNFSDESISIGSFHAMKNGILTSNSAGNRGPRT 240
S++L + A V+++++S+G + ++ + ++IG+F AM+ GIL S SAGN GP +
Sbjct: 261 SDILAAIDKAIADNVNVLSMSLGGGMS-DYYRDGVAIGAFAAMERGILVSCSAGNAGPSS 319
Query: 241 DQL 243
L
Sbjct: 320 SSL 322
>sp|O64495|SDD1_ARATH Subtilisin-like protease SDD1 OS=Arabidopsis thaliana GN=SDD1 PE=2
SV=1
Length = 775
Score = 39.7 bits (91), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 181 SEMLLMMHDATTVGVDLITISIGHAHALNFSDESISIGSFHAMKNGILTSNSAGNRGP 238
S++L + A VD++++S+G + D++I+IG+F AM+ GI +AGN GP
Sbjct: 271 SDILAAIDVAIQDKVDVLSLSLG-GFPIPLYDDTIAIGTFRAMERGISVICAAGNNGP 327
>sp|Q86AS0|Y4399_DICDI Probable helicase DDB_G0274399 OS=Dictyostelium discoideum
GN=DDB_G0274399 PE=3 SV=1
Length = 967
Score = 39.3 bits (90), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 78 LFHKLASMYPELMSSSQLAFISPYRHQVKQFQEWFKETFGELVDMTTTDGCQ 129
LF +YP+ +S++ ISPYR QV +E FK G +D T DG Q
Sbjct: 727 LFQLFTKVYPDEDFASRIGIISPYRQQVLALREIFKNYPGISID--TVDGFQ 776
>sp|O94387|YGSA_SCHPO Uncharacterized ATP-dependent helicase C29A10.10c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC29A10.10c PE=3 SV=1
Length = 1944
Score = 38.1 bits (87), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 76 FVLFHKLASMYPELMSSSQLAFISPYRHQVKQFQEWFKETFGELV----DMTTTDGCQ-- 129
+L+ +L Y + ++ ++PYR QV+Q + F+ +G ++ D+ T DG Q
Sbjct: 1652 LLLYERLIQCYLNIDFEGKIGVVTPYRSQVQQLRSQFQRKYGSIIFKHLDIHTVDGFQGQ 1711
Query: 130 ---IIRAWCHPSSEAG 142
II C SS +G
Sbjct: 1712 EKDIIIFSCVRSSMSG 1727
>sp|Q92355|SEN1_SCHPO Helicase sen1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=sen1 PE=1 SV=1
Length = 1687
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 73 EVEFV--LFHKLASMYPELMSSSQLAFISPYRHQVKQFQEWFKETFGE----LVDMTTTD 126
EVE++ + +L + +P++ + ++ I+PYR Q+ + + FK +G+ +D+ T D
Sbjct: 1509 EVEYLVNMVDELLNKFPDVNFTGRIGVITPYRSQLHELRRAFKVKYGKSFMSTIDIQTVD 1568
Query: 127 GCQ 129
G Q
Sbjct: 1569 GFQ 1571
>sp|P43075|TRNL_CANAL tRNA ligase OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=LIG1 PE=3 SV=2
Length = 832
Score = 33.1 bits (74), Expect = 2.0, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 83 ASMYPELMSSSQLAFISPYRHQVKQF-QEW-FKETFGELVDMTTTDGCQIIRAWCHPSSE 140
+ +Y ++ + + F + QV QF +EW FK V T D + + H SE
Sbjct: 212 SGLYVHGLNYNTITFKTLPMDQVLQFAKEWGFK-----YVSYLTYDNADELFKFLHKCSE 266
Query: 141 AGNYTAREIEG-----SQMSHTSSTAAG 163
G Y REIEG + SHT+ G
Sbjct: 267 TGTYNGREIEGFVIRCHRQSHTNGDTDG 294
>sp|Q5XHB2|DUS22_XENTR Dual specificity protein phosphatase 22 OS=Xenopus tropicalis
GN=dusp22 PE=2 SV=1
Length = 209
Score = 30.8 bits (68), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 102 RHQVKQFQEWFKETFGELVDMTTTDGCQIIRAWCHPSSEAGNYTAREIEGSQMS 155
+H V QF+ W KET+GE D Q++ H EA + G Q S
Sbjct: 140 KHDVYQFRTWLKETYGENPFNDKDDAKQLLDK--HKQQEAAESQSATSSGRQWS 191
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,273,598
Number of Sequences: 539616
Number of extensions: 3447050
Number of successful extensions: 8560
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 8550
Number of HSP's gapped (non-prelim): 15
length of query: 249
length of database: 191,569,459
effective HSP length: 115
effective length of query: 134
effective length of database: 129,513,619
effective search space: 17354824946
effective search space used: 17354824946
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)