BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046334
(248 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2O7R|A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With
Acyl Adduct
pdb|2O7V|A Chain A, Carboxylesterase Aecxe1 From Actinidia Eriantha Covalently
Inhibited By Paraoxon
Length = 338
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 102/184 (55%), Gaps = 14/184 (7%)
Query: 17 DGRVERYRAFPCVDAGLDPTTG--VQSKDVMISPETGVKARIFLPK---INSPGQKLPLL 71
D + R P A DPT+ V +KD+ ++P R+FLP+ NS KLPL+
Sbjct: 29 DRTITRPIQIPSTAASPDPTSSSPVLTKDLALNPLHNTFVRLFLPRHALYNS--AKLPLV 86
Query: 72 VNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRLAPEHPLPIAYDDSWAGLQWV 131
V +HGG F L SA +F++F + A ++ SVDYRLAPEH LP AYDD+ LQW+
Sbjct: 87 VYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHRLPAAYDDAMEALQWI 146
Query: 132 AAHSNGLGPEPWLNEHADLGRVFLAGESAGANIAHYLAVQAGAT--KLASIKIDGLLIVH 189
+ WL AD F+ GESAG NIA++ ++A A +L +KI GL++
Sbjct: 147 KDSR-----DEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDE 201
Query: 190 PFFG 193
P FG
Sbjct: 202 PGFG 205
>pdb|2ZSH|A Chain A, Structural Basis Of Gibberellin(Ga3)-Induced Della
Recognition By The Gibberellin Receptor
pdb|2ZSI|A Chain A, Structural Basis Of Gibberellin(Ga4)-Induced Della
Recognition By The Gibberellin Receptor
Length = 351
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 98/191 (51%), Gaps = 25/191 (13%)
Query: 29 VDAGLDPTTGVQSKDVMISPETGVKARIFLP------------KINSP--GQKLPLLVNY 74
V A +P GV S DV+I + +R++ P + P G +P+++ +
Sbjct: 60 VTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFF 119
Query: 75 HGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRLAPEHPLPIAYDDSWAGLQWVAAH 134
HGG+F SA +++ LV + +SV+YR APE+P P AYDD W L WV +
Sbjct: 120 HGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSR 179
Query: 135 SNGLGPEPWLNEHADLG-RVFLAGESAGANIAHYLAVQAGATKLASIKIDGLLIVHPFFG 193
S WL D +FLAG+S+G NIAH +A++AG + I + G ++++P FG
Sbjct: 180 S-------WLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGES---GIDVLGNILLNPMFG 229
Query: 194 VKEPHELYKYM 204
E E K +
Sbjct: 230 GNERTESEKSL 240
>pdb|3EBL|A Chain A, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|B Chain B, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|C Chain C, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|D Chain D, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|E Chain E, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|F Chain F, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3ED1|A Chain A, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|B Chain B, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|C Chain C, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|D Chain D, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|E Chain E, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|F Chain F, Crystal Structure Of Rice Gid1 Complexed With Ga3
Length = 365
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 32/193 (16%)
Query: 29 VDAGLDPTTGVQSKDVMISPETGVKARIFLPKINSPGQK--------------------- 67
V A P GV S D +I G++ RI+ ++
Sbjct: 52 VPANARPLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEP 111
Query: 68 LPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRLAPEHPLPIAYDDSWAG 127
P+++ +HGG+F SA ++++ V + + +SV+YR APEH P AYDD W
Sbjct: 112 FPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTA 171
Query: 128 LQWVAAHSNGLGPEPWLNEHADL-GRVFLAGESAGANIAHYLAVQAGATKLASIKIDGLL 186
L+WV + +P++ D RVFL+G+S+G NIAH++AV+A +K+ G +
Sbjct: 172 LKWVMS-------QPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADE---GVKVCGNI 221
Query: 187 IVHPFFGVKEPHE 199
+++ FG E E
Sbjct: 222 LLNAMFGGTERTE 234
>pdb|2YH2|A Chain A, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|B Chain B, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|C Chain C, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|D Chain D, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|3ZWQ|A Chain A, Hyperthermophilic Esterase From The Archeon Pyrobaculum
Calidifontis
pdb|3ZWQ|B Chain B, Hyperthermophilic Esterase From The Archeon Pyrobaculum
Calidifontis
Length = 313
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 76/132 (57%), Gaps = 14/132 (10%)
Query: 42 KDVMISPETG-VKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQA 100
+D+ I G ++AR++ P+ G++LP +V YHGG F LGS ++ L + +
Sbjct: 52 EDITIPGRGGPIRARVYRPR---DGERLPAVVYYHGGGFVLGSV--ETHDHVCRRLANLS 106
Query: 101 NIIAISVDYRLAPEHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESA 160
+ +SVDYRLAPEH P A +D++ +WVA + + LG D G++ +AG+SA
Sbjct: 107 GAVVVSVDYRLAPEHKFPAAVEDAYDAAKWVADNYDKLG--------VDNGKIAVAGDSA 158
Query: 161 GANIAHYLAVQA 172
G N+A A+ A
Sbjct: 159 GGNLAAVTAIMA 170
>pdb|2C7B|A Chain A, The Crystal Structure Of Este1, A New Thermophilic And
Thermostable Carboxylesterase Cloned From A Metagenomic
Library
pdb|2C7B|B Chain B, The Crystal Structure Of Este1, A New Thermophilic And
Thermostable Carboxylesterase Cloned From A Metagenomic
Library
Length = 311
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 76/132 (57%), Gaps = 14/132 (10%)
Query: 40 QSKDVMISPETG-VKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVS 98
+++DV I G ++AR++ PK LP ++ YHGG F GS ++ L
Sbjct: 47 ETRDVHIPVSGGSIRARVYFPK---KAAGLPAVLYYHGGGFVFGSI--ETHDHICRRLSR 101
Query: 99 QANIIAISVDYRLAPEHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGE 158
++ + +SVDYRLAPE+ P A +D++A L+WVA ++ LG +P R+ +AG+
Sbjct: 102 LSDSVVVSVDYRLAPEYKFPTAVEDAYAALKWVADRADELGVDP--------DRIAVAGD 153
Query: 159 SAGANIAHYLAV 170
SAG N+A +++
Sbjct: 154 SAGGNLAAVVSI 165
>pdb|3AIO|A Chain A, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|B Chain B, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|C Chain C, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|D Chain D, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 90/173 (52%), Gaps = 19/173 (10%)
Query: 20 VERYRAFPCVDAGLDPTTGV-QSKDVMI-SPETGVKARIFLPKINSPGQKLPLLVNYHGG 77
VE R+ + L P V + +D+ I ET +KAR++ PK P +LV YHGG
Sbjct: 43 VEEIRSLFKQFSSLTPREEVGKIEDITIPGSETNIKARVYYPKTQGP---YGVLVYYHGG 99
Query: 78 AFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRLAPEHPLPIAYDDSWAGLQWVAAHSNG 137
F LG ++ ++ + + ISVDYRLAPE+ P A DS+ L+WV +S
Sbjct: 100 GFVLGDI--ESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNS-- 155
Query: 138 LGPEPWLNEHADLGRVFLAGESAGANIAHYLAVQAGATKLASIKIDGLLIVHP 190
E + ++ + + G+SAG N+A AV A +K +IK+ ++++P
Sbjct: 156 ---EKFNGKYG----IAVGGDSAGGNLA---AVTAILSKKENIKLKYQVLIYP 198
>pdb|3AIK|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIL|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
Length = 323
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 90/173 (52%), Gaps = 19/173 (10%)
Query: 20 VERYRAFPCVDAGLDPTTGV-QSKDVMI-SPETGVKARIFLPKINSPGQKLPLLVNYHGG 77
VE R+ + L P V + +D+ I ET +KAR++ PK P +LV YHGG
Sbjct: 43 VEEIRSLFKQFSSLTPREEVGKIEDITIPGSETNIKARVYYPKTQGP---YGVLVYYHGG 99
Query: 78 AFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRLAPEHPLPIAYDDSWAGLQWVAAHSNG 137
F LG ++ ++ + + ISVDYRLAPE+ P A DS+ L+WV +S
Sbjct: 100 GFVLGDI--ESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNS-- 155
Query: 138 LGPEPWLNEHADLGRVFLAGESAGANIAHYLAVQAGATKLASIKIDGLLIVHP 190
E + ++ + + G+SAG N+A AV A +K +IK+ ++++P
Sbjct: 156 ---EKFNGKYG----IAVGGDSAGGNLA---AVTAILSKKENIKLKYQVLIYP 198
>pdb|3AIM|A Chain A, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|B Chain B, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|C Chain C, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|D Chain D, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 90/173 (52%), Gaps = 19/173 (10%)
Query: 20 VERYRAFPCVDAGLDPTTGV-QSKDVMI-SPETGVKARIFLPKINSPGQKLPLLVNYHGG 77
VE R+ + L P V + +D+ I ET +KAR++ PK P +LV YHGG
Sbjct: 43 VEEIRSLFKQFSSLTPREEVGKIEDITIPGSETNIKARVYYPKTQGP---YGVLVYYHGG 99
Query: 78 AFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRLAPEHPLPIAYDDSWAGLQWVAAHSNG 137
F LG ++ ++ + + ISVDYRLAPE+ P A DS+ L+WV +S
Sbjct: 100 GFVLGDI--ESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNS-- 155
Query: 138 LGPEPWLNEHADLGRVFLAGESAGANIAHYLAVQAGATKLASIKIDGLLIVHP 190
E + ++ + + G+SAG N+A AV A +K +IK+ ++++P
Sbjct: 156 ---EKFNGKYG----IAVGGDSAGGNLA---AVTAILSKKENIKLKYQVLIYP 198
>pdb|3AIN|A Chain A, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|B Chain B, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|C Chain C, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|D Chain D, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 90/173 (52%), Gaps = 19/173 (10%)
Query: 20 VERYRAFPCVDAGLDPTTGV-QSKDVMI-SPETGVKARIFLPKINSPGQKLPLLVNYHGG 77
VE R+ + L P V + +D+ I ET +KAR++ PK P +LV YHGG
Sbjct: 43 VEEIRSLFKQFSSLTPREEVGKIEDITIPGSETNIKARVYYPKTQGP---YGVLVYYHGG 99
Query: 78 AFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRLAPEHPLPIAYDDSWAGLQWVAAHSNG 137
F LG ++ ++ + + ISVDYRLAPE+ P A DS+ L+WV +S
Sbjct: 100 GFVLGDI--ESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNS-- 155
Query: 138 LGPEPWLNEHADLGRVFLAGESAGANIAHYLAVQAGATKLASIKIDGLLIVHP 190
E + ++ + + G+SAG N+A AV A +K +IK+ ++++P
Sbjct: 156 ---EKFNGKYG----IAVGGDSAGGNLA---AVTAILSKKENIKLKYQVLIYP 198
>pdb|2HM7|A Chain A, Crystal Structure Analysis Of The G84s Est2 Mutant
Length = 310
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 87/191 (45%), Gaps = 27/191 (14%)
Query: 15 YKDGRVERYRA----FPCVDAGLDPTTGVQSKDVMISPETGVKARIFLPKINSPGQKLPL 70
YK +++R+ FP V +P V+ D M P +K R++ P+ P P
Sbjct: 22 YKHLSAQQFRSQQSLFPPVKK--EPVAEVREFD-MDLPGRTLKVRMYRPEGVEP--PYPA 76
Query: 71 LVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRLAPEHPLPIAYDDSWAGLQW 130
LV YHGG++ +G + L + SVDYRLAPEH P A +D++ LQW
Sbjct: 77 LVYYHGGSWVVGDL--ETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQW 134
Query: 131 VAAHSNGLGPEPWLNEHADLGRVFLAGESAGANIA---HYLAVQAGATKLASIKIDGLLI 187
+A + H D R+ + G+SAG N+A LA + G LA L+
Sbjct: 135 IAERAADF--------HLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAF-----QLL 181
Query: 188 VHPFFGVKEPH 198
++P G H
Sbjct: 182 IYPSTGYDPAH 192
>pdb|1QZ3|A Chain A, Crystal Structure Of Mutant M211sR215L OF CARBOXYLESTERASE
Est2 Complexed With Hexadecanesulfonate
pdb|1U4N|A Chain A, Crystal Structure Analysis Of The M211sR215L EST2 MUTANT
Length = 310
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 15 YKDGRVERYRA----FPCVDAGLDPTTGVQSKDVMISPETGVKARIFLPKINSPGQKLPL 70
YK +++R+ FP V +P V+ D M P +K R++ P+ P P
Sbjct: 22 YKHLSAQQFRSQQSLFPPVKK--EPVAEVREFD-MDLPGRTLKVRMYRPEGVEP--PYPA 76
Query: 71 LVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRLAPEHPLPIAYDDSWAGLQW 130
LV YHGG + +G + L + SVDYRLAPEH P A +D++ LQW
Sbjct: 77 LVYYHGGGWVVGDL--ETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQW 134
Query: 131 VAAHSNGLGPEPWLNEHADLGRVFLAGESAGANIA---HYLAVQAGATKLASIKIDGLLI 187
+A + H D R+ + G+SAG N+A LA + G LA L+
Sbjct: 135 IAERAADF--------HLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAF-----QLL 181
Query: 188 VHPFFGVKEPH 198
++P G H
Sbjct: 182 IYPSTGYDPAH 192
>pdb|1EVQ|A Chain A, The Crystal Structure Of The Thermophilic Carboxylesterase
Est2 From Alicyclobacillus Acidocaldarius
Length = 310
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 85/191 (44%), Gaps = 27/191 (14%)
Query: 15 YKDGRVERYRA----FPCVDAGLDPTTGVQSKDVMISPETGVKARIFLPKINSPGQKLPL 70
YK +++R+ FP V +P V+ D + P +K R + P+ P P
Sbjct: 22 YKHLSAQQFRSQQSLFPPVKK--EPVAEVREFDXDL-PGRTLKVRXYRPEGVEP--PYPA 76
Query: 71 LVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRLAPEHPLPIAYDDSWAGLQW 130
LV YHGG + +G + L + SVDYRLAPEH P A +D++ LQW
Sbjct: 77 LVYYHGGGWVVGDL--ETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQW 134
Query: 131 VAAHSNGLGPEPWLNEHADLGRVFLAGESAGANIA---HYLAVQAGATKLASIKIDGLLI 187
+A + H D R+ + G+SAG N+A LA + G LA L+
Sbjct: 135 IAERAADF--------HLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAF-----QLL 181
Query: 188 VHPFFGVKEPH 198
++P G H
Sbjct: 182 IYPSTGYDPAH 192
>pdb|1JJI|A Chain A, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|B Chain B, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|C Chain C, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|D Chain D, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
Length = 311
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 41/226 (18%)
Query: 42 KDVMISPETG-VKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQ- 99
+D I G ++ R++ K +SP +LV YHGG F + S + ++ L +++
Sbjct: 57 EDRTIKGRNGDIRVRVYQQKPDSP-----VLVYYHGGGFVICS---IESHDALCRRIARL 108
Query: 100 ANIIAISVDYRLAPEHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGES 159
+N +SVDYRLAPEH P A D + +WVA ++ L +P ++F+ G+S
Sbjct: 109 SNSTVVSVDYRLAPEHKFPAAVYDCYDATKWVAENAEELRIDP--------SKIFVGGDS 160
Query: 160 AGANIAHYLAVQAGATKLASIKIDGLLIVHPFFGVKEP---------------HELYKYM 204
AG N+A +++ A + IK ++++P P ++ +
Sbjct: 161 AGGNLAAAVSIMARDSGEDFIK--HQILIYPVVNFVAPTPSLLEFGEGLWILDQKIMSWF 218
Query: 205 CPGSSGSDDDPKLNP---AVDPNLKNMAGDRVLVCVAEKDGLRNRG 247
++D K NP + +L+N+ L+ AE D LR+ G
Sbjct: 219 SEQYFSREED-KFNPLASVIFADLENLPP--ALIITAEYDPLRDEG 261
>pdb|1LZL|A Chain A, Bacterial Heroin Esterase
Length = 323
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 52 VKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL 111
VK R P N+ G +P+L+ HGG F +G+A + F + + +V+YRL
Sbjct: 65 VKIRFVTPD-NTAG-PVPVLLWIHGGGFAIGTAESS--DPFCVEVARELGFAVANVEYRL 120
Query: 112 APEHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGANIAHYLAVQ 171
APE P +D +A L ++ AH+ LG +P R+ + G+SAG +A ++
Sbjct: 121 APETTFPGPVNDCYAALLYIHAHAEELGIDP--------SRIAVGGQSAGGGLAAGTVLK 172
Query: 172 A 172
A
Sbjct: 173 A 173
>pdb|1LZK|A Chain A, Bacterial Heroin Esterase Complex With Transition State
Analog Dimethylarsenic Acid
Length = 323
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 52 VKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL 111
VK R P N+ G +P+L+ HGG F +G+A + F + + +V+YRL
Sbjct: 65 VKIRFVTPD-NTAG-PVPVLLWIHGGGFAIGTAESS--DPFCVEVARELGFAVANVEYRL 120
Query: 112 APEHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGANIAHYLAVQ 171
APE P +D +A L ++ AH+ LG +P R+ + G+SAG +A ++
Sbjct: 121 APETTFPGPVNDCYAALLYIHAHAEELGIDP--------SRIAVGGQSAGGGLAAGTVLK 172
Query: 172 A 172
A
Sbjct: 173 A 173
>pdb|1QE3|A Chain A, Pnb Esterase
Length = 489
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 24/130 (18%)
Query: 56 IFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRLAPEH 115
+F P ++P Q LP++V HGGAF LG+ +++ + L +Q +I ++++YRL P
Sbjct: 87 VFAP--DTPSQNLPVMVWIHGGAFYLGAGSEPLYDG--SKLAAQGEVIVVTLNYRLGPFG 142
Query: 116 PLPI-AYDDSW----------AGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGA-N 163
L + ++D+++ A L+WV + + G +P V + GESAG +
Sbjct: 143 FLHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDP--------DNVTVFGESAGGMS 194
Query: 164 IAHYLAVQAG 173
IA LA+ A
Sbjct: 195 IAALLAMPAA 204
>pdb|1C7I|A Chain A, Thermophylic Pnb Esterase
Length = 489
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 24/144 (16%)
Query: 42 KDVMISPETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQAN 101
K++ E + +F P ++P Q LP++V HGGAF LG+ +++ + L +Q
Sbjct: 73 KELPRQSEDCLYVNVFAP--DTPSQNLPVMVWIHGGAFYLGAGSEPLYDG--SKLAAQGE 128
Query: 102 IIAISVDYRLAPEHPLPI-AYDDSW----------AGLQWVAAHSNGLGPEPWLNEHADL 150
+I ++++YRL P + + ++D+++ A L+WV + + G +P
Sbjct: 129 VIVVTLNYRLGPFGFMHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDP-------- 180
Query: 151 GRVFLAGESAGA-NIAHYLAVQAG 173
V + GESAG +IA LA+ A
Sbjct: 181 DNVTVFGESAGGMSIAALLAMPAA 204
>pdb|1C7J|A Chain A, Pnb Esterase 56c8
Length = 489
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 24/130 (18%)
Query: 56 IFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRLAPEH 115
+F P ++P Q LP++V HGGAF LG+ +++ + L +Q +I ++++YRL P
Sbjct: 87 VFAP--DTPSQNLPVMVWIHGGAFYLGAGSEPLYDG--SKLAAQGEVIVVTLNYRLGPFG 142
Query: 116 PLPI-AYDDSW----------AGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGA-N 163
+ + ++D+++ A L+WV + + G +P V + GESAG +
Sbjct: 143 FMHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDP--------DNVTVFGESAGGMS 194
Query: 164 IAHYLAVQAG 173
IA LA+ A
Sbjct: 195 IAALLAMPAA 204
>pdb|3QH4|A Chain A, Crystal Structure Of Esterase Lipw From Mycobacterium
Marinum
Length = 317
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 69 PLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRLAPEHPLPIAYDDSWAGL 128
P++V H G F LG+ L L +A +SVDYRLAPEHP P A D+ L
Sbjct: 86 PVVVYCHAGGFALGN-LDTDHRQCL-ELARRARCAVVSVDYRLAPEHPYPAALHDAIEVL 143
Query: 129 QWVAAHSNGLG 139
WV ++ LG
Sbjct: 144 TWVVGNATRLG 154
>pdb|1THG|A Chain A, 1.8 Angstroms Refined Structure Of The Lipase From
Geotrichum Candidum
Length = 544
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 21/131 (16%)
Query: 56 IFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQAN-IIAISVDYRLAP- 113
+F P P KLP++V +GGAF GS+ N+++ ++ ++ +S++YR P
Sbjct: 110 VFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPF 169
Query: 114 ----------EHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGA- 162
E D GL+WV+ + G +P +V + GESAGA
Sbjct: 170 GFLGGDAITAEGNTNAGLHDQRKGLEWVSDNIANFGGDP--------DKVMIFGESAGAM 221
Query: 163 NIAHYLAVQAG 173
++AH L G
Sbjct: 222 SVAHQLIAYGG 232
>pdb|3DNM|A Chain A, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|B Chain B, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|C Chain C, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|D Chain D, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
Length = 336
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 16/121 (13%)
Query: 71 LVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRLAPEHPLPIAYDDSWAGLQW 130
++ +HGG + GS + T L Q++ S+DYRLAPE+P P A DD
Sbjct: 97 ILYFHGGGYISGSPSTHLV--LTTQLAKQSSATLWSLDYRLAPENPFPAAVDDC------ 148
Query: 131 VAAHSNGLGPEPWLNEHADLGRVFLAGESAGANIAHYLAVQAGATKLASIKIDGLLIVHP 190
VAA+ L R+ +AG+SAG + ++A L GL+++ P
Sbjct: 149 VAAY------RALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPA--GLVMLSP 200
Query: 191 F 191
F
Sbjct: 201 F 201
>pdb|3K6K|A Chain A, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|B Chain B, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|C Chain C, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|D Chain D, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
Length = 322
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 16/121 (13%)
Query: 71 LVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRLAPEHPLPIAYDDSWAGLQW 130
++ +HGG + GS + T L Q++ S+DYRLAPE+P P A DD
Sbjct: 83 ILYFHGGGYISGSPSTHLV--LTTQLAKQSSATLWSLDYRLAPENPFPAAVDDC------ 134
Query: 131 VAAHSNGLGPEPWLNEHADLGRVFLAGESAGANIAHYLAVQAGATKLASIKIDGLLIVHP 190
VAA+ L R+ +AG+SAG + ++A L GL+++ P
Sbjct: 135 VAAY------RALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPA--GLVMLSP 186
Query: 191 F 191
F
Sbjct: 187 F 187
>pdb|3V9A|A Chain A, Crystal Structure Of EsteraseLIPASE FROM UNCULTURED
BACTERIUM
Length = 309
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 17/114 (14%)
Query: 61 INSPG-QKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQAN-IIAISVDYRLAPEHPLP 118
+ +PG Q ++ HGG + +GS + + + +S+A+ A+ +DYRLAPEHP P
Sbjct: 59 VRAPGCQAGKAILYLHGGGYVMGS---INTHRSMVGEISRASQAAALLLDYRLAPEHPFP 115
Query: 119 IAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGANIAHYLAVQA 172
A +D A +W+ G P+ + ++G+SAG + + V A
Sbjct: 116 AAVEDGVAAYRWLL--DQGFKPQ----------HLSISGDSAGGGLVLAVLVSA 157
>pdb|3FAK|A Chain A, Structural And Functional Analysis Of A Hormone-Sensitive
Lipase Like Este5 From A Metagenome Library
pdb|3G9T|A Chain A, Crystal Structure Of Este5, Was Soaked By P-Nitrophenyl
Butyrate For 5sec
pdb|3G9U|A Chain A, Crystal Structure Of Este5, Was Soaked By P-nitrophenyl
Butyrate For 5min
pdb|3G9Z|A Chain A, Crystal Structure Of Este5, Was Soaked By P-Nitrophenyl
Caprylate
pdb|3H17|A Chain A, Crystal Structure Of Este5-Pmsf (I)
pdb|3H18|A Chain A, Crystal Structure Of Este5-pmsf (ii)
pdb|3H19|A Chain A, Crystal Structure Of Este5, Was Soaked By Methyl Alcohol
pdb|3H1A|A Chain A, Crystal Structure Of Este5, Was Soaked By Ethyl Alcohol
pdb|3H1B|A Chain A, Crystal Structure Of Este5, Was Soaked By Isopropyl
Alcohol
pdb|3L1H|A Chain A, Crystal Structure Of Este5, Was Soaked By Fecl3
pdb|3L1I|A Chain A, Crystal Structure Of Este5, Was Soaked By Cuso4
pdb|3L1J|A Chain A, Crystal Structure Of Este5, Was Soaked By Znso4
Length = 322
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 17/114 (14%)
Query: 61 INSPG-QKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQAN-IIAISVDYRLAPEHPLP 118
+ +PG Q ++ HGG + +GS + + + +S+A+ A+ +DYRLAPEHP P
Sbjct: 72 VRAPGCQAGKAILYLHGGGYVMGS---INTHRSMVGEISRASQAAALLLDYRLAPEHPFP 128
Query: 119 IAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGANIAHYLAVQA 172
A +D A +W+ G P+ + ++G+SAG + + V A
Sbjct: 129 AAVEDGVAAYRWLL--DQGFKPQ----------HLSISGDSAGGGLVLAVLVSA 170
>pdb|1JMY|A Chain A, Truncated Recombinant Human Bile Salt Stimulated Lipase
Length = 522
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 22/135 (16%)
Query: 41 SKDVMISPETGVKARIFLPK-INSPGQKLPLLVNYHGGAFCLGSAFGVMF-NNFL---TS 95
++D E + I++P+ + LP+++ +GGAF +GS G F NN+L
Sbjct: 70 TQDSTYGDEDCLYLNIWVPQGRKQVSRDLPVMIWIYGGAFLMGSGHGANFLNNYLYDGEE 129
Query: 96 LVSQANIIAISVDYRLAP-------EHPLPIAY--DDSWAGLQWVAAHSNGLGPEPWLNE 146
+ ++ N+I ++ +YR+ P + LP Y D + WV + G +P
Sbjct: 130 IATRGNVIVVTFNYRVGPLGFLSTGDANLPGNYGLRDQHMAIAWVKRNIAAFGGDP---- 185
Query: 147 HADLGRVFLAGESAG 161
+ L GESAG
Sbjct: 186 ----NNITLFGESAG 196
>pdb|1JKM|B Chain B, Brefeldin A Esterase, A Bacterial Homologue Of Human
Hormone Sensitive Lipase
pdb|1JKM|A Chain A, Brefeldin A Esterase, A Bacterial Homologue Of Human
Hormone Sensitive Lipase
Length = 361
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 18/130 (13%)
Query: 68 LPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRLA----PEHPLPIAYDD 123
LP LV HGG + + + + T L + +++ + VD+R A HP P +D
Sbjct: 109 LPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVV-VMVDFRNAWTAEGHHPFPSGVED 167
Query: 124 SWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGANIAHYLAVQAGATKLASIK-I 182
A + WV H LG L V + GES G N+A +A A + + I
Sbjct: 168 CLAAVLWVDEHRESLG----------LSGVVVQGESGGGNLA--IATTLLAKRRGRLDAI 215
Query: 183 DGLLIVHPFF 192
DG+ P+
Sbjct: 216 DGVYASIPYI 225
>pdb|1F6W|A Chain A, Structure Of The Catalytic Domain Of Human Bile Salt
Activated Lipase
Length = 533
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 22/135 (16%)
Query: 41 SKDVMISPETGVKARIFLPK-INSPGQKLPLLVNYHGGAFCLGSAFGVMF-NNFL---TS 95
++D E + I++P+ + LP+++ +GGAF +GS G F NN+L
Sbjct: 70 TQDSTYGDEDCLYLNIWVPQGRKQVSRDLPVMIWIYGGAFLMGSGHGANFLNNYLYDGEE 129
Query: 96 LVSQANIIAISVDYRLAP-------EHPLPIAY--DDSWAGLQWVAAHSNGLGPEPWLNE 146
+ ++ N+I ++ +YR+ P + LP Y D + WV + G +P
Sbjct: 130 IATRGNVIVVTFNYRVGPLGFLSTGDANLPGNYGLRDQHMAIAWVKRNIAAFGGDP---- 185
Query: 147 HADLGRVFLAGESAG 161
+ L GESAG
Sbjct: 186 ----DNITLFGESAG 196
>pdb|2BCE|A Chain A, Cholesterol Esterase From Bos Taurus
Length = 579
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 68 LPLLVNYHGGAFCLGSAFGVMF-NNFL---TSLVSQANIIAISVDYRLAP-------EHP 116
LP+++ +GGAF +G++ G F +N+L + ++ N+I ++ +YR+ P +
Sbjct: 98 LPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSN 157
Query: 117 LPIAYD--DSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAG 161
LP Y D + WV + G +P ++ L GESAG
Sbjct: 158 LPGNYGLWDQHMAIAWVKRNIEAFGGDP--------DQITLFGESAG 196
>pdb|1AQL|A Chain A, Crystal Structure Of Bovine Bile-Salt Activated Lipase
Complexed With Taurocholate
pdb|1AQL|B Chain B, Crystal Structure Of Bovine Bile-Salt Activated Lipase
Complexed With Taurocholate
Length = 532
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 22/135 (16%)
Query: 41 SKDVMISPETGVKARIFLPK-INSPGQKLPLLVNYHGGAFCLGSAFGVMF-NNFL---TS 95
++D E + I++P+ LP+++ +GGAF +G++ G F +N+L
Sbjct: 70 TQDSTYGNEDCLYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEE 129
Query: 96 LVSQANIIAISVDYRLAP-------EHPLPIAYD--DSWAGLQWVAAHSNGLGPEPWLNE 146
+ ++ N+I ++ +YR+ P + LP Y D + WV + G +P
Sbjct: 130 IATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDP---- 185
Query: 147 HADLGRVFLAGESAG 161
+ L GESAG
Sbjct: 186 ----DNITLFGESAG 196
>pdb|1AKN|A Chain A, Structure Of Bile-salt Activated Lipase
Length = 579
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 21/107 (19%)
Query: 68 LPLLVNYHGGAFCLGSAFGVMF-NNFL---TSLVSQANIIAISVDYRLAP-------EHP 116
LP+++ +GGAF +G++ G F +N+L + ++ N+I ++ +YR+ P +
Sbjct: 98 LPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSN 157
Query: 117 LPIAYD--DSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAG 161
LP Y D + WV + G +P + L GESAG
Sbjct: 158 LPGNYGLWDQHMAIAWVKRNIEAFGGDP--------DNITLFGESAG 196
>pdb|2OGT|A Chain A, Crystal Structure Of The Geobacillus Stearothermophilus
Carboxylesterase Est55 At Ph 6.8
Length = 498
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 27/161 (16%)
Query: 17 DGRVERYRAFPCVDAGLDPT-TGVQSKDVMISPETGVKARIFLPKINSPGQKLPLLVNYH 75
DG E P V DP +G+ + E G+ I+ P + G+K P+L H
Sbjct: 49 DGVREATSFGPVVMQPSDPIFSGLLGRMSEAPSEDGLYLNIWSPAAD--GKKRPVLFWIH 106
Query: 76 GGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL--------------APEHPLPIAY 121
GGAF GS ++ T+ +++ ++++YR+ A +
Sbjct: 107 GGAFLFGSGSSPWYDG--TAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQAGNLGI 164
Query: 122 DDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGA 162
D A L+WV + G +P + + GESAGA
Sbjct: 165 LDQVAALRWVKENIAAFGGDP--------DNITIFGESAGA 197
>pdb|2OGS|A Chain A, Crystal Structure Of The Geobacillus Stearothermophilus
Carboxylesterase Est55 At Ph 6.2
Length = 498
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 27/161 (16%)
Query: 17 DGRVERYRAFPCVDAGLDPT-TGVQSKDVMISPETGVKARIFLPKINSPGQKLPLLVNYH 75
DG E P V DP +G+ + E G+ I+ P + G+K P+L H
Sbjct: 49 DGVREATSFGPVVMQPSDPIFSGLLGRMSEAPSEDGLYLNIWSPAAD--GKKRPVLFWIH 106
Query: 76 GGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL--------------APEHPLPIAY 121
GGAF GS ++ T+ +++ ++++YR+ A +
Sbjct: 107 GGAFLFGSGSSPWYDG--TAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQAGNLGI 164
Query: 122 DDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGA 162
D A L+WV + G +P + + GESAGA
Sbjct: 165 LDQVAALRWVKENIAAFGGDP--------DNITIFGESAGA 197
>pdb|3K9B|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
Length = 529
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 21/131 (16%)
Query: 56 IFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL---- 111
I+ P + +LP++V HGG +G+A ++ +L + N++ +++ YRL
Sbjct: 98 IYTPADLTKKNRLPVMVWIHGGGLMVGAA--STYDGL--ALAAHENVVVVTIQYRLGIWG 153
Query: 112 ----APEHPL-PIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGANIAH 166
EH + D A L+WV + G P G V + GESAG
Sbjct: 154 FFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGGNP--------GSVTIFGESAGGESVS 205
Query: 167 YLAVQAGATKL 177
L + A L
Sbjct: 206 VLVLSPLAKNL 216
>pdb|2FJ0|A Chain A, Crystal Structure Of Juvenile Hormone Esterase From
Manduca Sexta, With Otfp Covalently Attached
Length = 551
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 50/120 (41%), Gaps = 22/120 (18%)
Query: 68 LPLLVNYHGGAFCLGSAFGVMFN-NFLTSLVSQANIIAISVDYRL---------APEHPL 117
LP+LV HGG F GS + +L S ++I I+ +YRL + P
Sbjct: 115 LPVLVFIHGGGFAFGSGDSDLHGPEYLVS----KDVIVITFNYRLNVYGFLSLNSTSVPG 170
Query: 118 PIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGANIAHYLAVQAGATKL 177
D L+WV +++ G P V L G+SAGA H L++ A L
Sbjct: 171 NAGLRDMVTLLKWVQRNAHFFGGRP--------DDVTLMGQSAGAAATHILSLSKAADGL 222
>pdb|1YA4|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA8|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YAH|A Chain A, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|B Chain B, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|C Chain C, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAJ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|2HRQ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRR|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|4AB1|A Chain A, Recombinant Human Carboxylesterase 1 From Whole Cabbage
Loopers
Length = 532
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 21/131 (16%)
Query: 56 IFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL---- 111
I+ P + +LP++V HGG +G+A ++ +L + N++ +++ YRL
Sbjct: 101 IYTPADLTKKNRLPVMVWIHGGGLMVGAA--STYDGL--ALAAHENVVVVTIQYRLGIWG 156
Query: 112 ----APEHPL-PIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGANIAH 166
EH + D A L+WV + G P G V + GESAG
Sbjct: 157 FFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGGNP--------GSVTIFGESAGGESVS 208
Query: 167 YLAVQAGATKL 177
L + A L
Sbjct: 209 VLVLSPLAKNL 219
>pdb|1MX1|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX5|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX9|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
Length = 548
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 21/131 (16%)
Query: 56 IFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL---- 111
I+ P + +LP++V HGG +G+A ++ +L + N++ +++ YRL
Sbjct: 103 IYTPADLTKKNRLPVMVWIHGGGLMVGAA--STYDGL--ALAAHENVVVVTIQYRLGIWG 158
Query: 112 ----APEHPL-PIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGANIAH 166
EH + D A L+WV + G P G V + GESAG
Sbjct: 159 FFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGGNP--------GSVTIFGESAGGESVS 210
Query: 167 YLAVQAGATKL 177
L + A L
Sbjct: 211 VLVLSPLAKNL 221
>pdb|2DQY|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQZ|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DR0|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2H7C|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|D Chain D, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|E Chain E, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|F Chain F, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
Length = 542
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 21/131 (16%)
Query: 56 IFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL---- 111
I+ P + +LP++V HGG +G+A ++ +L + N++ +++ YRL
Sbjct: 103 IYTPADLTKKNRLPVMVWIHGGGLMVGAA--STYDGL--ALAAHENVVVVTIQYRLGIWG 158
Query: 112 ----APEHPL-PIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGANIAH 166
EH + D A L+WV + G P G V + GESAG
Sbjct: 159 FFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGGNP--------GSVTIFGESAGGESVS 210
Query: 167 YLAVQAGATKL 177
L + A L
Sbjct: 211 VLVLSPLAKNL 221
>pdb|1DX4|A Chain A, Ache From Drosophila Melanogaster Complex With Tacrine
Derivative
9-(3-Phenylmethylamino)-1,2,3,4-Tetrahydroacridine
pdb|1QO9|A Chain A, Native Acetylcholinesterase From Drosophila Melanogaster
pdb|1QON|A Chain A, Ache From Drosophila Melanogaster Complex With Tacrine
Derivative
9-(3-Iodobenzylamino)-1,2,3,4-Tetrahydroacridine
Length = 585
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 28/113 (24%)
Query: 68 LPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYR--------LAPEHPLPI 119
LP+L+ +GG F GSA ++N + + V N+I S YR LAPE P
Sbjct: 141 LPILIWIYGGGFMTGSATLDIYNADIMAAV--GNVIVASFQYRVGAFGFLHLAPEMPSEF 198
Query: 120 AYD--------DSWAGLQWVAAHSNGLGPEP-WLNEHADLGRVFLAGESAGAN 163
A + D ++W+ +++ G P W+ L GESAG++
Sbjct: 199 AEEAPGNVGLWDQALAIRWLKDNAHAFGGNPEWMT---------LFGESAGSS 242
>pdb|3BE8|A Chain A, Crystal Structure Of The Synaptic Protein Neuroligin 4
pdb|3BE8|B Chain B, Crystal Structure Of The Synaptic Protein Neuroligin 4
pdb|2WQZ|A Chain A, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2WQZ|B Chain B, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2XB6|A Chain A, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
pdb|2XB6|B Chain B, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
Length = 588
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 24/134 (17%)
Query: 49 ETGVKARIFLPK---INSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAI 105
E + I++P I+ K P++V HGG++ G+ G M + + L S N+I I
Sbjct: 113 EDCLYLNIYVPTEDDIHDQNSKKPVMVYIHGGSYMEGT--GNMIDGSI--LASYGNVIVI 168
Query: 106 SVDYRLAPEHPLPIAYD---------DSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLA 156
+++YRL L D L+W+ + G +P RV +
Sbjct: 169 TINYRLGILGFLSTGDQAAKGNYGLLDQIQALRWIEENVGAFGGDP--------KRVTIF 220
Query: 157 GESAGANIAHYLAV 170
G AGA+ L +
Sbjct: 221 GSGAGASCVSLLTL 234
>pdb|1K4Y|A Chain A, Crystal Structure Of Rabbit Liver Carboxylesterase In
Complex With 4- Piperidino-Piperidine
Length = 534
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 21/117 (17%)
Query: 56 IFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL---- 111
I+ P + +LP++V HGG +G A ++ +L + N++ +++ YRL
Sbjct: 99 IYTPADLTKRGRLPVMVWIHGGGLMVGGA--STYDGL--ALSAHENVVVVTIQYRLGIWG 154
Query: 112 ----APEHPL-PIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGAN 163
EH + D A L+WV + G +P G V + GESAG
Sbjct: 155 FFSTGDEHSRGNWGHLDQVAALRWVQDNIANFGGDP--------GSVTIFGESAGGQ 203
>pdb|1LLF|A Chain A, Cholesterol Esterase (Candida Cylindracea) Crystal
Structure At 1.4a Resolution
pdb|1LLF|B Chain B, Cholesterol Esterase (Candida Cylindracea) Crystal
Structure At 1.4a Resolution
Length = 534
Score = 34.7 bits (78), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 55/131 (41%), Gaps = 20/131 (15%)
Query: 44 VMISPETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLT-SLVSQANI 102
V+ E + + P G LP+++ GG F +GS +T S++ I
Sbjct: 90 VLPQSEDCLTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPI 149
Query: 103 IAISVDYRLAP-----------EHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLG 151
I ++V+YR+A E D G+QWVA + G G +P
Sbjct: 150 IHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADNIAGFGGDP--------S 201
Query: 152 RVFLAGESAGA 162
+V + GESAG+
Sbjct: 202 KVTIFGESAGS 212
>pdb|1CLE|A Chain A, Structure Of Uncomplexed And Linoleate-Bound Candida
Cylindracea Cholesterol Esterase
pdb|1CLE|B Chain B, Structure Of Uncomplexed And Linoleate-Bound Candida
Cylindracea Cholesterol Esterase
Length = 534
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 55/131 (41%), Gaps = 20/131 (15%)
Query: 44 VMISPETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLT-SLVSQANI 102
V+ E + + P G LP+++ GG F +GS +T S++ I
Sbjct: 90 VLPQSEDCLTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPI 149
Query: 103 IAISVDYRLAP-----------EHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLG 151
I ++V+YR+A E D G+QWVA + G G +P
Sbjct: 150 IHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADNIAGFGGDP--------S 201
Query: 152 RVFLAGESAGA 162
+V + GESAG+
Sbjct: 202 KVTIFGESAGS 212
>pdb|1LPM|A Chain A, A Structural Basis For The Chiral Preferences Of Lipases
pdb|1LPN|A Chain A, Analogs Of Reaction Intermediates Identify A Unique
Substrate Binding Site In Candida Rugosa Lipase
pdb|1LPO|A Chain A, Analogs Of Reaction Intermediates Identify A Unique
Substrate Binding Site In Candida Rugosa Lipase
pdb|1LPP|A Chain A, Analogs Of Reaction Intermediates Identify A Unique
Substrate Binding Site In Candida Rugosa Lipase
pdb|1LPS|A Chain A, A Structural Basis For The Chiral Preferences Of Lipases
Length = 549
Score = 34.3 bits (77), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 20/128 (15%)
Query: 47 SPETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQAN-IIAI 105
S E + + P G LP+++ GG F +G +T ++ II +
Sbjct: 108 SSEDCLTINVVRPPGTKAGANLPVMLWIFGGGFEVGGTSTFPPAQMITKSIAMGKPIIHV 167
Query: 106 SVDYRLAP-----------EHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVF 154
SV+YR++ E D G+QWVA + G +P +V
Sbjct: 168 SVNYRVSSWGFLAGDEIKAEGSANAGLKDQRLGMQWVADNIAAFGGDPT--------KVT 219
Query: 155 LAGESAGA 162
+ GESAG+
Sbjct: 220 IFGESAGS 227
>pdb|1CRL|A Chain A, Insights Into Interfacial Activation From An 'open'
Structure Of Candida Rugosa Lipase
pdb|1TRH|A Chain A, Two Conformational States Of Candida Rugosa Lipase
pdb|3RAR|A Chain A, X-Ray Structure Of A Bound Phosphonate Transition State
Analog And Enantioselectivity Of Candida Rugosa Lipase
Toward Chiral Carboxylic Acids
Length = 534
Score = 34.3 bits (77), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 20/128 (15%)
Query: 47 SPETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQAN-IIAI 105
S E + + P G LP+++ GG F +G +T ++ II +
Sbjct: 93 SSEDCLTINVVRPPGTKAGANLPVMLWIFGGGFEVGGTSTFPPAQMITKSIAMGKPIIHV 152
Query: 106 SVDYRLAP-----------EHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVF 154
SV+YR++ E D G+QWVA + G +P +V
Sbjct: 153 SVNYRVSSWGFLAGDEIKAEGSANAGLKDQRLGMQWVADNIAAFGGDPT--------KVT 204
Query: 155 LAGESAGA 162
+ GESAG+
Sbjct: 205 IFGESAGS 212
>pdb|3DOH|A Chain A, Crystal Structure Of A Thermostable Esterase
pdb|3DOH|B Chain B, Crystal Structure Of A Thermostable Esterase
pdb|3DOI|A Chain A, Crystal Structure Of A Thermostable Esterase Complex With
Paraoxon
pdb|3DOI|B Chain B, Crystal Structure Of A Thermostable Esterase Complex With
Paraoxon
Length = 380
Score = 33.9 bits (76), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 20/128 (15%)
Query: 48 PETGVKA--RIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAI 105
PETGV+ R+F+PK +P +K PL+V HG + + N + +Q +
Sbjct: 152 PETGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVV 211
Query: 106 SVDYRLAPEHPLPIAYDDSWAGLQWVAAHSNGLGPE-----------PWLNEH-ADLGRV 153
+ LAP+ P + SW+ L N PE L+E+ D R+
Sbjct: 212 HPCFVLAPQCPP----NSSWSTL--FTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRI 265
Query: 154 FLAGESAG 161
++ G S G
Sbjct: 266 YITGLSMG 273
>pdb|4A5S|A Chain A, Crystal Structure Of Human Dpp4 In Complex With A Noval
Heterocyclic Dpp4 Inhibitor
pdb|4A5S|B Chain B, Crystal Structure Of Human Dpp4 In Complex With A Noval
Heterocyclic Dpp4 Inhibitor
Length = 740
Score = 33.9 bits (76), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 43 DVMISPETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANI 102
D +I ET ++ LP +K PLL++ + G C A V N+ T L S NI
Sbjct: 477 DFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGP-CSQKADTVFRLNWATYLASTENI 535
Query: 103 IAISVDYR 110
I S D R
Sbjct: 536 IVASFDGR 543
>pdb|2BGR|A Chain A, Crystal Structure Of Hiv-1 Tat Derived Nonapeptides
Tat(1-9) Bound To The Active Site Of Dipeptidyl
Peptidase Iv (Cd26)
pdb|2BGR|B Chain B, Crystal Structure Of Hiv-1 Tat Derived Nonapeptides
Tat(1-9) Bound To The Active Site Of Dipeptidyl
Peptidase Iv (Cd26)
Length = 738
Score = 33.9 bits (76), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 43 DVMISPETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANI 102
D +I ET ++ LP +K PLL++ + G C A V N+ T L S NI
Sbjct: 487 DFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGP-CSQKADTVFRLNWATYLASTENI 545
Query: 103 IAISVDYR 110
I S D R
Sbjct: 546 IVASFDGR 553
>pdb|1R9M|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv At 2.1
Ang. Resolution.
pdb|1R9M|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv At 2.1
Ang. Resolution.
pdb|1R9M|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase Iv At 2.1
Ang. Resolution.
pdb|1R9M|D Chain D, Crystal Structure Of Human Dipeptidyl Peptidase Iv At 2.1
Ang. Resolution
Length = 733
Score = 33.9 bits (76), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 43 DVMISPETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANI 102
D +I ET ++ LP +K PLL++ + G C A V N+ T L S NI
Sbjct: 482 DFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGP-CSQKADTVFRLNWATYLASTENI 540
Query: 103 IAISVDYR 110
I S D R
Sbjct: 541 IVASFDGR 548
>pdb|1J2E|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv
pdb|1J2E|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv
pdb|1WCY|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (dppiv)
Complex With Diprotin A
pdb|1WCY|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (dppiv)
Complex With Diprotin A
pdb|3VJM|A Chain A, Crystal Structure Of Human Depiptidyl Peptidase Iv (Dpp-4)
In Complex With A Prolylthiazolidine Inhibitor #1
pdb|3VJM|B Chain B, Crystal Structure Of Human Depiptidyl Peptidase Iv (Dpp-4)
In Complex With A Prolylthiazolidine Inhibitor #1
pdb|3VJK|A Chain A, Crystal Structure Of Human Depiptidyl Peptidase Iv (Dpp-4)
In Complex With Mp-513
pdb|3VJK|B Chain B, Crystal Structure Of Human Depiptidyl Peptidase Iv (Dpp-4)
In Complex With Mp-513
pdb|3VJL|A Chain A, Crystal Structure Of Human Depiptidyl Peptidase Iv (Dpp-4)
In Complex With A Prolylthiazolidine Inhibitor #2
pdb|3VJL|B Chain B, Crystal Structure Of Human Depiptidyl Peptidase Iv (Dpp-4)
In Complex With A Prolylthiazolidine Inhibitor #2
Length = 740
Score = 33.9 bits (76), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 43 DVMISPETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANI 102
D +I ET ++ LP +K PLL++ + G C A V N+ T L S NI
Sbjct: 483 DFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGP-CSQKADTVFRLNWATYLASTENI 541
Query: 103 IAISVDYR 110
I S D R
Sbjct: 542 IVASFDGR 549
>pdb|2JID|A Chain A, Human Dipeptidyl Peptidase Iv In Complex With 1-(3,4-
Dimethoxy-Phenyl)-3-M-Tolyl-Piperidine-4-Ylamine
pdb|2JID|B Chain B, Human Dipeptidyl Peptidase Iv In Complex With 1-(3,4-
Dimethoxy-Phenyl)-3-M-Tolyl-Piperidine-4-Ylamine
Length = 736
Score = 33.9 bits (76), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 43 DVMISPETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANI 102
D +I ET ++ LP +K PLL++ + G C A V N+ T L S NI
Sbjct: 485 DFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGP-CSQKADTVFRLNWATYLASTENI 543
Query: 103 IAISVDYR 110
I S D R
Sbjct: 544 IVASFDGR 551
>pdb|1R9N|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Decapeptide (Tnpy) At 2.3 Ang. Resolution
pdb|1R9N|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Decapeptide (Tnpy) At 2.3 Ang. Resolution
pdb|1R9N|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Decapeptide (Tnpy) At 2.3 Ang. Resolution
pdb|1R9N|D Chain D, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Decapeptide (Tnpy) At 2.3 Ang. Resolution
Length = 739
Score = 33.9 bits (76), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 43 DVMISPETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANI 102
D +I ET ++ LP +K PLL++ + G C A V N+ T L S NI
Sbjct: 488 DFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGP-CSQKADTVFRLNWATYLASTENI 546
Query: 103 IAISVDYR 110
I S D R
Sbjct: 547 IVASFDGR 554
>pdb|3CCB|A Chain A, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCB|B Chain B, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCB|C Chain C, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCB|D Chain D, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCC|A Chain A, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCC|B Chain B, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCC|C Chain C, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCC|D Chain D, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3G0B|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Tak-322
pdb|3G0B|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Tak-322
pdb|3G0B|C Chain C, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Tak-322
pdb|3G0B|D Chain D, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Tak-322
pdb|3G0C|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 1
pdb|3G0C|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 1
pdb|3G0C|C Chain C, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 1
pdb|3G0C|D Chain D, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 1
pdb|3G0D|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 2
pdb|3G0D|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 2
pdb|3G0D|C Chain C, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 2
pdb|3G0D|D Chain D, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 2
pdb|3G0G|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinone Inhibitor 3
pdb|3G0G|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinone Inhibitor 3
pdb|3G0G|C Chain C, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinone Inhibitor 3
pdb|3G0G|D Chain D, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinone Inhibitor 3
pdb|3O95|A Chain A, Crystal Structure Of Human Dpp4 Bound To Tak-100
pdb|3O95|B Chain B, Crystal Structure Of Human Dpp4 Bound To Tak-100
pdb|3O95|C Chain C, Crystal Structure Of Human Dpp4 Bound To Tak-100
pdb|3O95|D Chain D, Crystal Structure Of Human Dpp4 Bound To Tak-100
pdb|3O9V|A Chain A, Crystal Structure Of Human Dpp4 Bound To Tak-986
pdb|3O9V|B Chain B, Crystal Structure Of Human Dpp4 Bound To Tak-986
pdb|3O9V|C Chain C, Crystal Structure Of Human Dpp4 Bound To Tak-986
pdb|3O9V|D Chain D, Crystal Structure Of Human Dpp4 Bound To Tak-986
pdb|3OPM|A Chain A, Crystal Structure Of Human Dpp4 Bound To Tak-294
pdb|3OPM|B Chain B, Crystal Structure Of Human Dpp4 Bound To Tak-294
pdb|3OPM|C Chain C, Crystal Structure Of Human Dpp4 Bound To Tak-294
pdb|3OPM|D Chain D, Crystal Structure Of Human Dpp4 Bound To Tak-294
pdb|4G1F|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Pyridopyrimidinedione Analogue
pdb|4G1F|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Pyridopyrimidinedione Analogue
pdb|4G1F|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Pyridopyrimidinedione Analogue
pdb|4G1F|D Chain D, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Pyridopyrimidinedione Analogue
Length = 740
Score = 33.5 bits (75), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 43 DVMISPETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANI 102
D +I ET ++ LP +K PLL++ + G C A V N+ T L S NI
Sbjct: 489 DFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGP-CSQKADTVFRLNWATYLASTENI 547
Query: 103 IAISVDYR 110
I S D R
Sbjct: 548 IVASFDGR 555
>pdb|2ONC|A Chain A, Crystal Structure Of Human Dpp-4
pdb|2ONC|B Chain B, Crystal Structure Of Human Dpp-4
pdb|2ONC|C Chain C, Crystal Structure Of Human Dpp-4
pdb|2ONC|D Chain D, Crystal Structure Of Human Dpp-4
Length = 731
Score = 33.5 bits (75), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 43 DVMISPETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANI 102
D +I ET ++ LP +K PLL++ + G C A V N+ T L S NI
Sbjct: 480 DFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGP-CSQKADTVFRLNWATYLASTENI 538
Query: 103 IAISVDYR 110
I S D R
Sbjct: 539 IVASFDGR 546
>pdb|2RIP|A Chain A, Structure Of Dppiv In Complex With An Inhibitor
Length = 729
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 43 DVMISPETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANI 102
D +I ET ++ LP +K PLL++ + G C A V N+ T L S NI
Sbjct: 478 DFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGP-CSQKADTVFRLNWATYLASTENI 536
Query: 103 IAISVDYR 110
I S D R
Sbjct: 537 IVASFDGR 544
>pdb|1PFQ|A Chain A, Crystal Structure Of Human Apo Dipeptidyl Peptidase Iv /
Cd26
pdb|1PFQ|B Chain B, Crystal Structure Of Human Apo Dipeptidyl Peptidase Iv /
Cd26
Length = 731
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 43 DVMISPETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANI 102
D +I ET ++ LP +K PLL++ + G C A V N+ T L S NI
Sbjct: 480 DFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGP-CSQKADTVFRLNWATYLASTENI 538
Query: 103 IAISVDYR 110
I S D R
Sbjct: 539 IVASFDGR 546
>pdb|3Q8W|A Chain A, A B-Aminoacyl Containing Thiazolidine Derivative And Dppiv
Complex
pdb|3Q8W|B Chain B, A B-Aminoacyl Containing Thiazolidine Derivative And Dppiv
Complex
Length = 732
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 43 DVMISPETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANI 102
D +I ET ++ LP +K PLL++ + G C A V N+ T L S NI
Sbjct: 477 DFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGP-CSQKADTVFRLNWATYLASTENI 535
Query: 103 IAISVDYR 110
I S D R
Sbjct: 536 IVASFDGR 543
>pdb|2G5P|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor
21ac
pdb|2G5P|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor
21ac
pdb|2G5T|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor
21ag
pdb|2G5T|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor
21ag
pdb|2G63|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor
24b
pdb|2G63|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor
24b
pdb|2G63|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor
24b
pdb|2G63|D Chain D, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor
24b
pdb|2I03|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase 4 (Dpp Iv)
With Potent Alkynyl Cyanopyrrolidine (Abt-279)
pdb|2I03|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase 4 (Dpp Iv)
With Potent Alkynyl Cyanopyrrolidine (Abt-279)
pdb|2I03|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase 4 (Dpp Iv)
With Potent Alkynyl Cyanopyrrolidine (Abt-279)
pdb|2I03|D Chain D, Crystal Structure Of Human Dipeptidyl Peptidase 4 (Dpp Iv)
With Potent Alkynyl Cyanopyrrolidine (Abt-279)
pdb|2OQV|A Chain A, Human Dipeptidyl Peptidase Iv (Dpp4) With Piperidine-
Constrained Phenethylamine
pdb|2OQV|B Chain B, Human Dipeptidyl Peptidase Iv (Dpp4) With Piperidine-
Constrained Phenethylamine
pdb|2I78|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dpp
Iv) Complexed With Abt-341, A Cyclohexene-Constrained
Phenethylamine Inhibitor
pdb|2I78|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dpp
Iv) Complexed With Abt-341, A Cyclohexene-Constrained
Phenethylamine Inhibitor
pdb|2I78|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dpp
Iv) Complexed With Abt-341, A Cyclohexene-Constrained
Phenethylamine Inhibitor
pdb|2I78|D Chain D, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dpp
Iv) Complexed With Abt-341, A Cyclohexene-Constrained
Phenethylamine Inhibitor
pdb|2OAG|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
With Pyrrolidine-Constrained Phenethylamine 29g
pdb|2OAG|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
With Pyrrolidine-Constrained Phenethylamine 29g
pdb|2OAG|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
With Pyrrolidine-Constrained Phenethylamine 29g
pdb|2OAG|D Chain D, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
With Pyrrolidine-Constrained Phenethylamine 29g
Length = 726
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 43 DVMISPETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANI 102
D +I ET ++ LP +K PLL++ + G C A V N+ T L S NI
Sbjct: 477 DFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGP-CSQKADTVFRLNWATYLASTENI 535
Query: 103 IAISVDYR 110
I S D R
Sbjct: 536 IVASFDGR 543
>pdb|1N1M|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH AN
INHIBITOR
pdb|1N1M|B Chain B, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH AN
INHIBITOR
pdb|1NU6|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv
(Dpp-Iv)
pdb|1NU6|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv
(Dpp-Iv)
pdb|1NU8|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv
(Dpp-Iv) In Complex With Diprotin A (Ili)
pdb|1NU8|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv
(Dpp-Iv) In Complex With Diprotin A (Ili)
pdb|1TK3|A Chain A, Crystal Structure Of Human Apo Dipeptidyl Peptidase IvCD26
pdb|1TK3|B Chain B, Crystal Structure Of Human Apo Dipeptidyl Peptidase IvCD26
pdb|1TKR|A Chain A, Human Dipeptidyl Peptidase IvCD26 INHIBITED WITH
DIISOPROPYL Fluorophosphate
pdb|1TKR|B Chain B, Human Dipeptidyl Peptidase IvCD26 INHIBITED WITH
DIISOPROPYL Fluorophosphate
pdb|1W1I|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv (Dppiv Or
Cd26) In Complex With Adenosine Deaminase
pdb|1W1I|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv (Dppiv Or
Cd26) In Complex With Adenosine Deaminase
pdb|1W1I|C Chain C, Crystal Structure Of Dipeptidyl Peptidase Iv (Dppiv Or
Cd26) In Complex With Adenosine Deaminase
pdb|1W1I|D Chain D, Crystal Structure Of Dipeptidyl Peptidase Iv (Dppiv Or
Cd26) In Complex With Adenosine Deaminase
pdb|1RWQ|A Chain A, Human Dipeptidyl Peptidase Iv In Complex With
5-Aminomethyl-6-(2,4-
Dichloro-Phenyl)-2-(3,
5-Dimethoxy-Phenyl)-Pyrimidin-4-Ylamine
pdb|1RWQ|B Chain B, Human Dipeptidyl Peptidase Iv In Complex With
5-Aminomethyl-6-(2,4-
Dichloro-Phenyl)-2-(3,
5-Dimethoxy-Phenyl)-Pyrimidin-4-Ylamine
pdb|2BGN|A Chain A, Hiv-1 Tat Protein Derived N-Terminal Nonapeptide Trp2-Tat
(1-9) Bound To The Active Site Of Dipeptidyl Peptidase
Iv (Cd26)
pdb|2BGN|B Chain B, Hiv-1 Tat Protein Derived N-Terminal Nonapeptide Trp2-Tat
(1-9) Bound To The Active Site Of Dipeptidyl Peptidase
Iv (Cd26)
pdb|2BGN|C Chain C, Hiv-1 Tat Protein Derived N-Terminal Nonapeptide Trp2-Tat
(1-9) Bound To The Active Site Of Dipeptidyl Peptidase
Iv (Cd26)
pdb|2BGN|D Chain D, Hiv-1 Tat Protein Derived N-Terminal Nonapeptide Trp2-Tat
(1-9) Bound To The Active Site Of Dipeptidyl Peptidase
Iv (Cd26)
pdb|2AJL|I Chain I, X-Ray Structure Of Novel Biaryl-Based Dipeptidyl Peptidase
Iv Inhibitor
pdb|2AJL|J Chain J, X-Ray Structure Of Novel Biaryl-Based Dipeptidyl Peptidase
Iv Inhibitor
pdb|2BUB|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Cd26)
In Complex With A Reversed Amide Inhibitor
pdb|2BUB|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Cd26)
In Complex With A Reversed Amide Inhibitor
pdb|2OGZ|A Chain A, Crystal Structure Of Dpp-Iv Complexed With Lilly Aryl
Ketone Inhibitor
pdb|2OGZ|B Chain B, Crystal Structure Of Dpp-Iv Complexed With Lilly Aryl
Ketone Inhibitor
pdb|2OQI|A Chain A, Human Dipeptidyl Peptidase Iv (Dpp4) With Piperidinone-
Constrained Phenethylamine
pdb|2OQI|B Chain B, Human Dipeptidyl Peptidase Iv (Dpp4) With Piperidinone-
Constrained Phenethylamine
pdb|2OQI|C Chain C, Human Dipeptidyl Peptidase Iv (Dpp4) With Piperidinone-
Constrained Phenethylamine
pdb|2OQI|D Chain D, Human Dipeptidyl Peptidase Iv (Dpp4) With Piperidinone-
Constrained Phenethylamine
pdb|2OLE|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complex With Cyclic Hydrazine Derivatives
pdb|2OLE|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv)
Complex With Cyclic Hydrazine Derivatives
pdb|3BJM|A Chain A, Crystal Structure Of Human Dpp-Iv In Complex With (1s,3s,
5s)-2-[(2s)-
2-Amino-2-(3-Hydroxytricyclo[3.3.1.13,7]dec-1-
Yl)acetyl]-2- Azabicyclo[3.1.0]hexane-3-Carbonitrile
(Cas), (1s,3s,5s)-2-((2s)-2-
Amino-2-(3-Hydroxyadamantan-1-
Yl)acetyl)-2-Azabicyclo[3.1.0]hexane- 3-Carbonitrile
(Iupac), Or Bms-477118
pdb|3BJM|B Chain B, Crystal Structure Of Human Dpp-Iv In Complex With (1s,3s,
5s)-2-[(2s)-
2-Amino-2-(3-Hydroxytricyclo[3.3.1.13,7]dec-1-
Yl)acetyl]-2- Azabicyclo[3.1.0]hexane-3-Carbonitrile
(Cas), (1s,3s,5s)-2-((2s)-2-
Amino-2-(3-Hydroxyadamantan-1-
Yl)acetyl)-2-Azabicyclo[3.1.0]hexane- 3-Carbonitrile
(Iupac), Or Bms-477118
pdb|3EIO|A Chain A, Crystal Structure Analysis Of Dppiv Inhibitor
pdb|3EIO|B Chain B, Crystal Structure Analysis Of Dppiv Inhibitor
pdb|3H0C|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Cd26)
In Complex With A Reversed Amide Inhibitor
pdb|3H0C|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Cd26)
In Complex With A Reversed Amide Inhibitor
pdb|3KWF|A Chain A, Human Dpp-Iv With Carmegliptin
(S)-1-((2s,3s,11bs)-2-Amino-
9,10-Dimethoxy-1,3,4,6,7,11b-Hexahydro-2h-Pyrido[2,1-
A]isoquinolin-3-Yl)-4-Fluoromethyl-Pyrrolidin-2-One
pdb|3KWF|B Chain B, Human Dpp-Iv With Carmegliptin
(S)-1-((2s,3s,11bs)-2-Amino-
9,10-Dimethoxy-1,3,4,6,7,11b-Hexahydro-2h-Pyrido[2,1-
A]isoquinolin-3-Yl)-4-Fluoromethyl-Pyrrolidin-2-One
pdb|3OC0|A Chain A, Structure Of Human Dpp-Iv With Hts Hit
(2s,3s,11bs)-3-Butyl-9,10-
Dimethoxy-1,3,4,6,7,11b-Hexahydro-2h-Pyrido[2,
1-A]isoquinolin-2- Ylamine
pdb|3OC0|B Chain B, Structure Of Human Dpp-Iv With Hts Hit
(2s,3s,11bs)-3-Butyl-9,10-
Dimethoxy-1,3,4,6,7,11b-Hexahydro-2h-Pyrido[2,
1-A]isoquinolin-2- Ylamine
pdb|3KWJ|A Chain A, Strucutre Of Human Dpp-Iv With
(2s,3s,11bs)-3-(3-Fluoromethyl-Phenyl)-
9,10-Dimethoxy-1,3,4,6,7,11b-Hexahydro-2h-Pyrido[2,
1-A]isoquinolin-2- Ylamine
pdb|3KWJ|B Chain B, Strucutre Of Human Dpp-Iv With
(2s,3s,11bs)-3-(3-Fluoromethyl-Phenyl)-
9,10-Dimethoxy-1,3,4,6,7,11b-Hexahydro-2h-Pyrido[2,
1-A]isoquinolin-2- Ylamine
pdb|4DSA|A Chain A, Crystal Structure Of Dpp-iv With Compound C1
pdb|4DSA|B Chain B, Crystal Structure Of Dpp-iv With Compound C1
pdb|4DSZ|A Chain A, Crystal Structure Of Dpp-iv With Compound C2
pdb|4DSZ|B Chain B, Crystal Structure Of Dpp-iv With Compound C2
pdb|4DTC|A Chain A, Crystal Structure Of Dpp-iv With Compound C5
pdb|4DTC|B Chain B, Crystal Structure Of Dpp-iv With Compound C5
Length = 728
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 43 DVMISPETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANI 102
D +I ET ++ LP +K PLL++ + G C A V N+ T L S NI
Sbjct: 477 DFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGP-CSQKADTVFRLNWATYLASTENI 535
Query: 103 IAISVDYR 110
I S D R
Sbjct: 536 IVASFDGR 543
>pdb|2RGU|A Chain A, Crystal Structure Of Complex Of Human Dpp4 And Inhibitor
pdb|2RGU|B Chain B, Crystal Structure Of Complex Of Human Dpp4 And Inhibitor
Length = 734
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 43 DVMISPETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANI 102
D +I ET ++ LP +K PLL++ + G C A V N+ T L S NI
Sbjct: 477 DFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGP-CSQKADTVFRLNWATYLASTENI 535
Query: 103 IAISVDYR 110
I S D R
Sbjct: 536 IVASFDGR 543
>pdb|1X70|A Chain A, Human Dipeptidyl Peptidase Iv In Complex With A Beta Amino
Acid Inhibitor
pdb|1X70|B Chain B, Human Dipeptidyl Peptidase Iv In Complex With A Beta Amino
Acid Inhibitor
pdb|2FJP|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH AN
INHIBITOR
pdb|2FJP|B Chain B, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH AN
INHIBITOR
pdb|2HHA|A Chain A, The Structure Of Dpp4 In Complex With An Oxadiazole
Inhibitor
pdb|2HHA|B Chain B, The Structure Of Dpp4 In Complex With An Oxadiazole
Inhibitor
pdb|2IIT|A Chain A, Human Dipeptidyl Peptidase 4 In Complex With A
Diazepan-2-one Inhibitor
pdb|2IIT|B Chain B, Human Dipeptidyl Peptidase 4 In Complex With A
Diazepan-2-one Inhibitor
pdb|2IIV|A Chain A, Human Dipeptidyl Peptidase 4 In Complex With A
Diazepan-2-One Inhibitor
pdb|2IIV|B Chain B, Human Dipeptidyl Peptidase 4 In Complex With A
Diazepan-2-One Inhibitor
pdb|2OPH|A Chain A, Human Dipeptidyl Peptidase Iv In Complex With An Alpha
Amino Acid Inhibitor
pdb|2OPH|B Chain B, Human Dipeptidyl Peptidase Iv In Complex With An Alpha
Amino Acid Inhibitor
pdb|2P8S|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A
CYCLOHEXALAMINE Inhibitor
pdb|2P8S|B Chain B, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A
CYCLOHEXALAMINE Inhibitor
pdb|2QOE|A Chain A, Human Dipeptidyl Peptidase Iv In Complex With A
Triazolopiperazine- Based Beta Amino Acid Inhibitor
pdb|2QOE|B Chain B, Human Dipeptidyl Peptidase Iv In Complex With A
Triazolopiperazine- Based Beta Amino Acid Inhibitor
pdb|3C43|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A
FLOUROOLEFIN Inhibitor
pdb|3C43|B Chain B, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A
FLOUROOLEFIN Inhibitor
pdb|3C45|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A
FLUOROOLEFIN Inhibitor
pdb|3C45|B Chain B, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A
FLUOROOLEFIN Inhibitor
pdb|3D4L|A Chain A, Human Dipeptidyl Peptidase Iv/cd26 In Complex With A Novel
Inhibitor
pdb|3D4L|B Chain B, Human Dipeptidyl Peptidase Iv/cd26 In Complex With A Novel
Inhibitor
pdb|2QKY|A Chain A, Complex Structure Of Dipeptidyl Peptidase Iv And A
Oxadiazolyl Ketone
pdb|2QKY|B Chain B, Complex Structure Of Dipeptidyl Peptidase Iv And A
Oxadiazolyl Ketone
pdb|2QKY|C Chain C, Complex Structure Of Dipeptidyl Peptidase Iv And A
Oxadiazolyl Ketone
pdb|2QKY|D Chain D, Complex Structure Of Dipeptidyl Peptidase Iv And A
Oxadiazolyl Ketone
pdb|3HAB|A Chain A, The Structure Of Dpp4 In Complex With Piperidine Fused
Benzimidazole 25
pdb|3HAB|B Chain B, The Structure Of Dpp4 In Complex With Piperidine Fused
Benzimidazole 25
pdb|3HAC|A Chain A, The Structure Of Dpp-4 In Complex With Piperidine Fused
Imidazopyridine 34
pdb|3HAC|B Chain B, The Structure Of Dpp-4 In Complex With Piperidine Fused
Imidazopyridine 34
Length = 728
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 43 DVMISPETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANI 102
D +I ET ++ LP +K PLL++ + G C A V N+ T L S NI
Sbjct: 477 DFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGP-CSQKADTVFRLNWATYLASTENI 535
Query: 103 IAISVDYR 110
I S D R
Sbjct: 536 IVASFDGR 543
>pdb|3BIW|A Chain A, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|B Chain B, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|C Chain C, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|D Chain D, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIX|A Chain A, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|B Chain B, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|C Chain C, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|D Chain D, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
Length = 574
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 39 VQSKDVMISPETGVKARIFLPK---INSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTS 95
V S V E + I++P I G P++V HGG++ G+ G +++ +
Sbjct: 99 VVSSYVQDQSEDCLYLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGT--GNLYDG--SV 154
Query: 96 LVSQANIIAISVDYRL 111
L S N+I I+V+YRL
Sbjct: 155 LASYGNVIVITVNYRL 170
>pdb|3QBJ|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Inhibitor
pdb|3QBJ|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Inhibitor
Length = 748
Score = 33.1 bits (74), Expect = 0.15, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 43 DVMISPETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANI 102
D +I ET ++ LP +K PLL++ + G C A V N+ T L S NI
Sbjct: 485 DFIILAETKFWYQMILPPHFDKSKKYPLLLDVYAGP-CSQKADTVFRLNWATYLASTENI 543
Query: 103 IAISVDYR 110
I S D R
Sbjct: 544 IVASFDGR 551
>pdb|3B3Q|A Chain A, Crystal Structure Of A Synaptic Adhesion Complex
pdb|3B3Q|B Chain B, Crystal Structure Of A Synaptic Adhesion Complex
Length = 577
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 39 VQSKDVMISPETGVKARIFLPK---INSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTS 95
V S V E + I++P I G P++V HGG++ G+ G +++ +
Sbjct: 112 VVSSYVQDQSEDCLYLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGT--GNLYDG--SV 167
Query: 96 LVSQANIIAISVDYRL 111
L S N+I I+V+YRL
Sbjct: 168 LASYGNVIVITVNYRL 183
>pdb|3GA7|A Chain A, 1.55 Angstrom Crystal Structure Of An Acetyl Esterase From
Salmonella Typhimurium
Length = 326
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Query: 17 DGRVERYRAFPCVDAGL---DPTTGVQSKDVMISPETGVKARIFLPKINSPGQKLPLLVN 73
DG +E R + ++ D + + +P V R++ P+ S L
Sbjct: 37 DGDIETQRQYYLLERRFWNADAPSXTTRTCAVPTPYGDVTTRLYSPQPTSQAT----LYY 92
Query: 74 YHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRLAPEHPLPIAYDDSWAGLQWVAA 133
HGG F LG+ + L I +DY L+P+ P A +++ A + +
Sbjct: 93 LHGGGFILGNL--DTHDRIXRLLARYTGCTVIGIDYSLSPQARYPQAIEETVAVCSYFSQ 150
Query: 134 HSN 136
H++
Sbjct: 151 HAD 153
>pdb|2GBC|A Chain A, Native Dpp-Iv (Cd26) From Rat
pdb|2GBC|B Chain B, Native Dpp-Iv (Cd26) From Rat
pdb|2GBF|A Chain A, Rat Dpp-Iv With Alkynyl Cyanopyrrolidine #1
pdb|2GBF|B Chain B, Rat Dpp-Iv With Alkynyl Cyanopyrrolidine #1
pdb|2GBG|A Chain A, Rat Dpp-Iv With Alkynyl Cyanopyrrolidine #2
pdb|2GBG|B Chain B, Rat Dpp-Iv With Alkynyl Cyanopyrrolidine #2
pdb|2GBI|A Chain A, Rat Dpp-Iv With Xanthine Inhibitor 4
pdb|2GBI|B Chain B, Rat Dpp-Iv With Xanthine Inhibitor 4
pdb|2I3Z|A Chain A, Rat Dpp-iv With Xanthine Mimetic Inhibitor #7
pdb|2I3Z|B Chain B, Rat Dpp-iv With Xanthine Mimetic Inhibitor #7
pdb|2OAE|A Chain A, Crystal Structure Of Rat Dipeptidyl Peptidase (Dppiv) With
Thiazole-Based Peptide Mimetic #31
pdb|2OAE|B Chain B, Crystal Structure Of Rat Dipeptidyl Peptidase (Dppiv) With
Thiazole-Based Peptide Mimetic #31
pdb|4FFV|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv (Dpp4,
Dpp-Iv, Cd26) In Complex With 11a19 Fab
pdb|4FFV|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv (Dpp4,
Dpp-Iv, Cd26) In Complex With 11a19 Fab
pdb|4FFW|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv (Dpp4,
Dpp-Iv, Cd26) In Complex With Fab + Sitagliptin
pdb|4FFW|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv (Dpp4,
Dpp-Iv, Cd26) In Complex With Fab + Sitagliptin
Length = 730
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 43 DVMISPETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANI 102
D ++ ET ++ LP +K PLL++ + G C A N+ T L S NI
Sbjct: 479 DFIVLNETRFWYQMILPPHFDKSKKYPLLIDVYAGP-CSQKADAAFRLNWATYLASTENI 537
Query: 103 IAISVDYR 110
I S D R
Sbjct: 538 IVASFDGR 545
>pdb|3NOX|A Chain A, Crystal Structure Of Human Dpp-Iv In Complex With
Sa-(+)-(6-
(Aminomethyl)-5-(2,4-Dichlorophenyl)-7-Methylimidazo[1,
2-A]pyrimidin- 2-Yl)(Morpholino)methanone
pdb|3NOX|B Chain B, Crystal Structure Of Human Dpp-Iv In Complex With
Sa-(+)-(6-
(Aminomethyl)-5-(2,4-Dichlorophenyl)-7-Methylimidazo[1,
2-A]pyrimidin- 2-Yl)(Morpholino)methanone
pdb|3SWW|A Chain A, Crystal Structure Of Human Dpp-Iv In Complex With
Sa-(+)-3-
(Aminomethyl)-4-(2,
4-Dichlorophenyl)-6-(2-Methoxyphenyl)- 2-Methyl-
5h-Pyrrolo[3,4-B]pyridin-7(6h)-One
pdb|3SWW|B Chain B, Crystal Structure Of Human Dpp-Iv In Complex With
Sa-(+)-3-
(Aminomethyl)-4-(2,
4-Dichlorophenyl)-6-(2-Methoxyphenyl)- 2-Methyl-
5h-Pyrrolo[3,4-B]pyridin-7(6h)-One
pdb|3SX4|A Chain A, Crystal Structure Of Human Dpp-Iv In Complex With
Sa-(+)-3-
(Aminomethyl)-4-(2,
4-Dichlorophenyl)-6-(2-Methoxyphenyl)- 2-Methyl-
5h-Pyrrolo[3,4-B]pyridin-7(6h)-One
pdb|3SX4|B Chain B, Crystal Structure Of Human Dpp-Iv In Complex With
Sa-(+)-3-
(Aminomethyl)-4-(2,
4-Dichlorophenyl)-6-(2-Methoxyphenyl)- 2-Methyl-
5h-Pyrrolo[3,4-B]pyridin-7(6h)-One
pdb|3Q0T|A Chain A, Crystal Structure Of Human Dpp-iv In Complex Withsa-(+)-
Methyl2-(3-
(aminomethyl)-4-(2,4-dichlorophenyl)-2-methyl-
7-oxo-5h-pyrrolo[3,4- B]pyridin-6(7h)-yl)acetate
pdb|3Q0T|B Chain B, Crystal Structure Of Human Dpp-iv In Complex Withsa-(+)-
Methyl2-(3-
(aminomethyl)-4-(2,4-dichlorophenyl)-2-methyl-
7-oxo-5h-pyrrolo[3,4- B]pyridin-6(7h)-yl)acetate
Length = 753
Score = 32.7 bits (73), Expect = 0.22, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 43 DVMISPETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANI 102
D +I ET ++ LP +K PLL++ + G C A V N+ T L S NI
Sbjct: 479 DFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGP-CSQKADTVFRLNWATYLASTENI 537
Query: 103 IAISVDYR 110
I S D R
Sbjct: 538 IVASFDGR 545
>pdb|2QJR|A Chain A, Dipepdyl Peptidase Iv In Complex With Inhibitor Pzf
pdb|2QJR|B Chain B, Dipepdyl Peptidase Iv In Complex With Inhibitor Pzf
pdb|3F8S|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Inhibitor
pdb|3F8S|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Inhibitor
Length = 748
Score = 32.7 bits (73), Expect = 0.22, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 43 DVMISPETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANI 102
D +I ET ++ LP +K PLL++ + G C A V N+ T L S NI
Sbjct: 485 DFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGP-CSQKADTVFRLNWATYLASTENI 543
Query: 103 IAISVDYR 110
I S D R
Sbjct: 544 IVASFDGR 551
>pdb|2QT9|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A 4-Aryl
Cyclohexylalanine Inhibitor
pdb|2QT9|B Chain B, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A 4-Aryl
Cyclohexylalanine Inhibitor
pdb|2QTB|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A 4-Aryl
Cyclohexylalanine Inhibitor
pdb|2QTB|B Chain B, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A 4-Aryl
Cyclohexylalanine Inhibitor
Length = 766
Score = 32.7 bits (73), Expect = 0.22, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 43 DVMISPETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANI 102
D +I ET ++ LP +K PLL++ + G C A V N+ T L S NI
Sbjct: 515 DFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGP-CSQKADTVFRLNWATYLASTENI 573
Query: 103 IAISVDYR 110
I S D R
Sbjct: 574 IVASFDGR 581
>pdb|3VKF|A Chain A, Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COMPLEX
pdb|3VKF|B Chain B, Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COMPLEX
Length = 585
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 61 INSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRLA 112
I G P++V HGG++ G+ G +++ + L S N+I I+V+YRL
Sbjct: 142 IRDSGGPKPVMVYIHGGSYMEGT--GNLYDG--SVLASYGNVIVITVNYRLG 189
>pdb|1MAA|A Chain A, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|B Chain B, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|C Chain C, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|D Chain D, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
Length = 547
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 20/109 (18%)
Query: 64 PGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL----------AP 113
P P+L+ +GG F G+A +++ + V A + +S++YR+ +
Sbjct: 108 PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGA--VLVSMNYRVGTFGFLALPGSR 165
Query: 114 EHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGA 162
E P + D LQWV + G +P V L GESAGA
Sbjct: 166 EAPGNVGLLDQRLALQWVQENIAAFGGDPM--------SVTLFGESAGA 206
>pdb|1KU6|A Chain A, Fasciculin 2-Mouse Acetylcholinesterase Complex
Length = 549
Score = 31.6 bits (70), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 20/109 (18%)
Query: 64 PGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL----------AP 113
P P+L+ +GG F G+A +++ + V A + +S++YR+ +
Sbjct: 108 PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGA--VLVSMNYRVGTFGFLALPGSR 165
Query: 114 EHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGA 162
E P + D LQWV + G +P V L GESAGA
Sbjct: 166 EAPGNVGLLDQRLALQWVQENIAAFGGDPM--------SVTLFGESAGA 206
>pdb|1N5M|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Gallamine Complex
pdb|1N5M|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Gallamine Complex
Length = 541
Score = 31.6 bits (70), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 20/109 (18%)
Query: 64 PGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL----------AP 113
P P+L+ +GG F G+A +++ + V A + +S++YR+ +
Sbjct: 108 PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGA--VLVSMNYRVGTFGFLALPGSR 165
Query: 114 EHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGA 162
E P + D LQWV + G +P V L GESAGA
Sbjct: 166 EAPGNVGLLDQRLALQWVQENIAAFGGDPM--------SVTLFGESAGA 206
>pdb|2C0P|A Chain A, Aged Form Of Mouse Acetylcholinesterase Inhibited By Tabun
pdb|2C0P|B Chain B, Aged Form Of Mouse Acetylcholinesterase Inhibited By Tabun
pdb|2C0Q|A Chain A, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun
pdb|2C0Q|B Chain B, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun
pdb|2JEY|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Hlo-7
pdb|2JEY|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Hlo-7
pdb|2WHR|A Chain A, Crystal Structure Of Acetylcholinesterase In Complex With
K027
pdb|2WHR|B Chain B, Crystal Structure Of Acetylcholinesterase In Complex With
K027
pdb|4A23|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Racemic
C5685
pdb|4A23|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Racemic
C5685
pdb|4ARA|A Chain A, Mus Musculus Acetylcholinesterase In Complex With
(r)-c5685 At 2.5 A Resolution.
pdb|4ARA|B Chain B, Mus Musculus Acetylcholinesterase In Complex With
(r)-c5685 At 2.5 A Resolution.
pdb|4ARB|A Chain A, Mus Musculus Acetylcholinesterase In Complex With
(s)-c5685 At 2.25 A Resolution.
pdb|4ARB|B Chain B, Mus Musculus Acetylcholinesterase In Complex With
(s)-c5685 At 2.25 A Resolution
Length = 548
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 20/109 (18%)
Query: 64 PGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL----------AP 113
P P+L+ +GG F G+A +++ + V A + +S++YR+ +
Sbjct: 108 PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGA--VLVSMNYRVGTFGFLALPGSR 165
Query: 114 EHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGA 162
E P + D LQWV + G +P V L GESAGA
Sbjct: 166 EAPGNVGLLDQRLALQWVQENIAAFGGDPM--------SVTLFGESAGA 206
>pdb|1MAH|A Chain A, Fasciculin2-Mouse Acetylcholinesterase Complex
pdb|1J06|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In The Apo
Form
pdb|1J06|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In The Apo
Form
pdb|1J07|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Decidium Complex
pdb|1J07|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Decidium Complex
pdb|1N5R|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Propidium Complex
pdb|1N5R|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Propidium Complex
pdb|2H9Y|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With M-(N,N, N-Trimethylammonio)trifluoroacetophenone
pdb|2H9Y|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With M-(N,N, N-Trimethylammonio)trifluoroacetophenone
pdb|2HA0|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With 4- Ketoamyltrimethylammonium
pdb|2HA0|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With 4- Ketoamyltrimethylammonium
pdb|2HA2|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Succinylcholine
pdb|2HA2|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Succinylcholine
pdb|2HA3|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Choline
pdb|2HA3|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Choline
pdb|2GYU|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Hi-6
pdb|2GYU|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Hi-6
pdb|2GYV|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Ortho-7
pdb|2GYV|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Ortho-7
pdb|2GYW|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Obidoxime
pdb|2GYW|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Obidoxime
pdb|2WLS|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Amts13
pdb|2WLS|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Amts13
pdb|4BC0|A Chain A, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|B Chain B, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|C Chain C, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|D Chain D, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC1|A Chain A, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|B Chain B, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|C Chain C, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|D Chain D, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
Length = 543
Score = 31.2 bits (69), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 20/109 (18%)
Query: 64 PGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL----------AP 113
P P+L+ +GG F G+A +++ + V A + +S++YR+ +
Sbjct: 108 PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGA--VLVSMNYRVGTFGFLALPGSR 165
Query: 114 EHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGA 162
E P + D LQWV + G +P V L GESAGA
Sbjct: 166 EAPGNVGLLDQRLALQWVQENIAAFGGDPM--------SVTLFGESAGA 206
>pdb|2XUF|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Mth)
pdb|2XUF|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Mth)
pdb|2XUG|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Wk)
pdb|2XUG|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Wk)
Length = 544
Score = 31.2 bits (69), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 20/109 (18%)
Query: 64 PGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL----------AP 113
P P+L+ +GG F G+A +++ + V A + +S++YR+ +
Sbjct: 108 PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGA--VLVSMNYRVGTFGFLALPGSR 165
Query: 114 EHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGA 162
E P + D LQWV + G +P V L GESAGA
Sbjct: 166 EAPGNVGLLDQRLALQWVQENIAAFGGDPM--------SVTLFGESAGA 206
>pdb|2XUD|A Chain A, Crystal Structure Of The Y337a Mutant Of Mouse
Acetylcholinesterase
pdb|2XUD|B Chain B, Crystal Structure Of The Y337a Mutant Of Mouse
Acetylcholinesterase
pdb|2XUH|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (10
Mth)
pdb|2XUH|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (10
Mth)
pdb|2XUI|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1 Wk)
pdb|2XUI|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1 Wk)
pdb|2XUJ|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1
Mth)
pdb|2XUJ|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1
Mth)
pdb|2XUK|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (10
Mth)
pdb|2XUK|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (10
Mth)
pdb|2XUO|A Chain A, Crystal Structure Of Mache-Y337a Mutant In Complex With
Soaked Tz2pa6 Anti Inhibitor
pdb|2XUO|B Chain B, Crystal Structure Of Mache-Y337a Mutant In Complex With
Soaked Tz2pa6 Anti Inhibitor
pdb|2XUP|A Chain A, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Syn Inhibitor
pdb|2XUP|B Chain B, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Syn Inhibitor
pdb|2XUQ|A Chain A, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Anti-Syn Inhibitors
pdb|2XUQ|B Chain B, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Anti-Syn Inhibitors
Length = 543
Score = 31.2 bits (69), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 20/109 (18%)
Query: 64 PGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL----------AP 113
P P+L+ +GG F G+A +++ + V A + +S++YR+ +
Sbjct: 108 PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGA--VLVSMNYRVGTFGFLALPGSR 165
Query: 114 EHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGA 162
E P + D LQWV + G +P V L GESAGA
Sbjct: 166 EAPGNVGLLDQRLALQWVQENIAAFGGDPM--------SVTLFGESAGA 206
>pdb|4A16|A Chain A, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|B Chain B, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|C Chain C, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|D Chain D, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
Length = 545
Score = 31.2 bits (69), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 20/109 (18%)
Query: 64 PGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL----------AP 113
P P+L+ +GG F G+A +++ + V A + +S++YR+ +
Sbjct: 105 PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGA--VLVSMNYRVGTFGFLALPGSR 162
Query: 114 EHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGA 162
E P + D LQWV + G +P V L GESAGA
Sbjct: 163 EAPGNVGLLDQRLALQWVQENIAAFGGDPM--------SVTLFGESAGA 203
>pdb|1C2O|A Chain A, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|B Chain B, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|C Chain C, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|D Chain D, Electrophorus Electricus Acetylcholinesterase
Length = 539
Score = 31.2 bits (69), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 20/109 (18%)
Query: 64 PGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL----------AP 113
P P+L+ +GG F G+A +++ + V A + +S++YR+ +
Sbjct: 104 PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGA--VLVSMNYRVGTFGFLALPGSR 161
Query: 114 EHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGA 162
E P + D LQWV + G +P V L GESAGA
Sbjct: 162 EAPGNVGLLDQRLALQWVQENIAAFGGDPM--------SVTLFGESAGA 202
>pdb|1C2B|A Chain A, Electrophorus Electricus Acetylcholinesterase
Length = 540
Score = 31.2 bits (69), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 20/109 (18%)
Query: 64 PGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL----------AP 113
P P+L+ +GG F G+A +++ + V A + +S++YR+ +
Sbjct: 105 PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGA--VLVSMNYRVGTFGFLALPGSR 162
Query: 114 EHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGA 162
E P + D LQWV + G +P V L GESAGA
Sbjct: 163 EAPGNVGLLDQRLALQWVQENIAAFGGDPM--------SVTLFGESAGA 203
>pdb|1Q83|A Chain A, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Syn Complex
pdb|1Q83|B Chain B, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Syn Complex
pdb|1Q84|A Chain A, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Anti Complex
pdb|1Q84|B Chain B, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Anti Complex
Length = 580
Score = 31.2 bits (69), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 20/109 (18%)
Query: 64 PGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL----------AP 113
P P+L+ +GG F G+A +++ + V A + +S++YR+ +
Sbjct: 139 PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGA--VLVSMNYRVGTFGFLALPGSR 196
Query: 114 EHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGA 162
E P + D LQWV + G +P V L GESAGA
Sbjct: 197 EAPGNVGLLDQRLALQWVQENIAAFGGDPM--------SVTLFGESAGA 237
>pdb|2HA4|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Acetylcholine
pdb|2HA4|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Acetylcholine
pdb|2HA5|A Chain A, Crystal Structure Of Mutant S203a Of Acetylcholinesterase
Complexed With Acetylthiocholine
pdb|2HA5|B Chain B, Crystal Structure Of Mutant S203a Of Acetylcholinesterase
Complexed With Acetylthiocholine
pdb|2HA6|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Succinylcholine
pdb|2HA6|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Succinylcholine
pdb|2HA7|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Butyrylthiocholine
pdb|2HA7|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Butyrylthiocholine
Length = 543
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 20/109 (18%)
Query: 64 PGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL----------AP 113
P P+L+ +GG F G+A +++ + V A + +S++YR+ +
Sbjct: 108 PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGA--VLVSMNYRVGTFGFLALPGSR 165
Query: 114 EHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGA 162
E P + D LQWV + G +P V L GE+AGA
Sbjct: 166 EAPGNVGLLDQRLALQWVQENIAAFGGDPM--------SVTLFGEAAGA 206
>pdb|2WHP|B Chain B, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin And In Complex With Hi-6
Length = 548
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 20/109 (18%)
Query: 64 PGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL----------AP 113
P P+L+ +GG F G+A +++ + V A + +S++YR+ +
Sbjct: 108 PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGA--VLVSMNYRVGTFGFLALPGSR 165
Query: 114 EHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGA 162
E P + D LQWV + G +P V L GE AGA
Sbjct: 166 EAPGNVGLLDQRLALQWVQENIAAFGGDPM--------SVTLFGEXAGA 206
>pdb|2JGF|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Fenamiphos
pdb|2JGF|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Fenamiphos
pdb|2JGI|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGI|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGK|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Fenamiphos
pdb|2JGK|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Fenamiphos
pdb|2JGL|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Vx And Sarin
pdb|2JGL|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Vx And Sarin
pdb|2JGM|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGM|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JEZ|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Hlo-7
pdb|2JEZ|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Hlo-7
pdb|2JF0|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Ortho-7
pdb|2JF0|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Ortho-7
pdb|3DL4|A Chain A, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
pdb|3DL4|B Chain B, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
pdb|2WHP|A Chain A, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin And In Complex With Hi-6
pdb|2WHQ|A Chain A, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin (Aged) In Complex With Hi-6
pdb|2WHQ|B Chain B, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin (Aged) In Complex With Hi-6
pdb|2WU3|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Hi-6
pdb|2WU3|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Hi-6
pdb|2WU4|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Ortho-7
pdb|2WU4|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Ortho-7
pdb|2Y2U|A Chain A, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Vx-Update
pdb|2Y2U|B Chain B, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Vx-Update
pdb|2Y2V|A Chain A, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Sarin-Update
pdb|2Y2V|B Chain B, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Sarin-Update
Length = 548
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 20/109 (18%)
Query: 64 PGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL----------AP 113
P P+L+ +GG F G+A +++ + V A + +S++YR+ +
Sbjct: 108 PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGA--VLVSMNYRVGTFGFLALPGSR 165
Query: 114 EHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGA 162
E P + D LQWV + G +P V L GE AGA
Sbjct: 166 EAPGNVGLLDQRLALQWVQENIAAFGGDPM--------SVTLFGEXAGA 206
>pdb|1GZ7|A Chain A, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|B Chain B, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|C Chain C, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|D Chain D, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
Length = 534
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 24/118 (20%)
Query: 61 INSPGQK----LPLLVNYHGGAFCLGSAFGVMFNNFLT-SLVSQANIIAISVDYRLAP-- 113
I PG + LP+++ GG F LG + + + S++ +I +S++YR+A
Sbjct: 103 IRPPGTRASAGLPVMLWIFGGGFELGGSSLFPGDQMVAKSVLMGKPVIHVSMNYRVASWG 162
Query: 114 ---------EHPLPIAYDDSWAGLQWVAAHSNGLGPEPWLNEHADLGRVFLAGESAGA 162
E D +QWVA + G G +P +V + GESAG+
Sbjct: 163 FLAGPDIQNEGSGNAGLHDQRLAMQWVADNIAGFGGDP--------SKVTIYGESAGS 212
>pdb|4DIL|A Chain A, Flavo Di-Iron Protein H90n Mutant From Thermotoga Maritima
pdb|4DIL|B Chain B, Flavo Di-Iron Protein H90n Mutant From Thermotoga Maritima
Length = 410
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 164 IAHYLA-VQAGATKLASIKIDGLLIVHPFFGVKEPHELYKYMCPGSSGSDDDPK 216
I HY + GA KL+S+KI LL H K+P L + + G DPK
Sbjct: 214 IGHYKNYILEGAEKLSSLKIKALLPGHGLIWKKDPQRLLNHYVSVAKG---DPK 264
>pdb|1VME|A Chain A, Crystal Structure Of Flavoprotein (Tm0755) From Thermotoga
Maritima At 1.80 A Resolution
pdb|1VME|B Chain B, Crystal Structure Of Flavoprotein (Tm0755) From Thermotoga
Maritima At 1.80 A Resolution
Length = 410
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 164 IAHYLA-VQAGATKLASIKIDGLLIVHPFFGVKEPHELYKYMCPGSSGSDDDPK 216
I HY + GA KL+S+KI LL H K+P L + + G DPK
Sbjct: 214 IGHYKNYILEGAEKLSSLKIKALLPGHGLIWKKDPQRLLNHYVSVAKG---DPK 264
>pdb|4DIK|A Chain A, Flavo Di-Iron Protein H90a Mutant From Thermotoga Maritima
pdb|4DIK|B Chain B, Flavo Di-Iron Protein H90a Mutant From Thermotoga Maritima
Length = 410
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 164 IAHYLA-VQAGATKLASIKIDGLLIVHPFFGVKEPHELYKYMCPGSSGSDDDPK 216
I HY + GA KL+S+KI LL H K+P L + + G DPK
Sbjct: 214 IGHYKNYILEGAEKLSSLKIKALLPGHGLIWKKDPQRLLNHYVSVAKG---DPK 264
>pdb|1Z68|A Chain A, Crystal Structure Of Human Fibroblast Activation Protein
Alpha
pdb|1Z68|B Chain B, Crystal Structure Of Human Fibroblast Activation Protein
Alpha
Length = 719
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 49 ETGVKARIFLPKINSPGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVD 108
E + ++ LP +K PLL+ +GG C S V N+++ L S+ ++ VD
Sbjct: 477 EITLWYKMILPPQFDRSKKYPLLIQVYGGP-CSQSVRSVFAVNWISYLASKEGMVIALVD 535
Query: 109 YR 110
R
Sbjct: 536 GR 537
>pdb|2JGE|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Methamidophos
pdb|2JGJ|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Methamidophos
Length = 536
Score = 27.7 bits (60), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 64 PGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL----------AP 113
P P+L+ +GG F G+A +++ + V A + +S++YR+ +
Sbjct: 108 PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGA--VLVSMNYRVGTFGFLALPGSR 165
Query: 114 EHPLPIAYDDSWAGLQWVAAHSNGLGPEP 142
E P + D LQWV + G +P
Sbjct: 166 EAPGNVGLLDQRLALQWVQENIAAFGGDP 194
>pdb|3DL7|A Chain A, Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
Length = 538
Score = 27.7 bits (60), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 64 PGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL----------AP 113
P P+L+ +GG F G+A +++ + V A + +S++YR+ +
Sbjct: 108 PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGA--VLVSMNYRVGTFGFLALPGSR 165
Query: 114 EHPLPIAYDDSWAGLQWVAAHSNGLGPEP 142
E P + D LQWV + G +P
Sbjct: 166 EAPGNVGLLDQRLALQWVQENIAAFGGDP 194
>pdb|2JGE|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Methamidophos
Length = 533
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 64 PGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL----------AP 113
P P+L+ +GG F G+A +++ + V A + +S++YR+ +
Sbjct: 105 PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGA--VLVSMNYRVGTFGFLALPGSR 162
Query: 114 EHPLPIAYDDSWAGLQWVAAHSNGLGPEP 142
E P + D LQWV + G +P
Sbjct: 163 EAPGNVGLLDQRLALQWVQENIAAFGGDP 191
>pdb|2JGJ|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Methamidophos
Length = 535
Score = 27.7 bits (60), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 64 PGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL----------AP 113
P P+L+ +GG F G+A +++ + V A + +S++YR+ +
Sbjct: 105 PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGA--VLVSMNYRVGTFGFLALPGSR 162
Query: 114 EHPLPIAYDDSWAGLQWVAAHSNGLGPEP 142
E P + D LQWV + G +P
Sbjct: 163 EAPGNVGLLDQRLALQWVQENIAAFGGDP 191
>pdb|3DL7|B Chain B, Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
Length = 534
Score = 27.7 bits (60), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 64 PGQKLPLLVNYHGGAFCLGSAFGVMFNNFLTSLVSQANIIAISVDYRL----------AP 113
P P+L+ +GG F G+A +++ + V A + +S++YR+ +
Sbjct: 105 PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGA--VLVSMNYRVGTFGFLALPGSR 162
Query: 114 EHPLPIAYDDSWAGLQWVAAHSNGLGPEP 142
E P + D LQWV + G +P
Sbjct: 163 EAPGNVGLLDQRLALQWVQENIAAFGGDP 191
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.139 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,407,609
Number of Sequences: 62578
Number of extensions: 359165
Number of successful extensions: 824
Number of sequences better than 100.0: 95
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 755
Number of HSP's gapped (non-prelim): 95
length of query: 248
length of database: 14,973,337
effective HSP length: 96
effective length of query: 152
effective length of database: 8,965,849
effective search space: 1362809048
effective search space used: 1362809048
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)