BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046336
(167 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B7FA90|HPT1_ORYSJ Probable homogentisate phytyltransferase 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT1 PE=2 SV=1
Length = 404
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 109/167 (65%), Gaps = 8/167 (4%)
Query: 1 MAPFTLVILMGLLLQIPFFIHSQTYVLGRPFIMTRSFIFTTAIMSIFAFVNGLLKDLPDV 60
+A ++ + +++Q+ FF+H QT+V RP + TR IF TA M+ F+ V L KD+PD+
Sbjct: 246 VAALCILAVRAVIVQLAFFLHIQTFVFRRPAVFTRPLIFATAFMTFFSVVIALFKDIPDI 305
Query: 61 EGDKAFGMQTLCVLLGKEKVLPLCVNLMLIGYGGAIIAGSSSSSIISKLVTIIGHSILAF 120
EGD+ FG+++ V LG++KV +CV L+ + Y AI+ G++S+ + SK T++GH+ILA
Sbjct: 306 EGDRIFGIKSFSVRLGQKKVFWICVGLLEMAYCVAILMGATSACLWSKYATVVGHAILAA 365
Query: 121 MVWLRSRKVDLDSFESQFSFYMYLWKASDYSTSVLNYIEYFLIHFLR 167
++W RSR +DL S + SFYM++WK L Y EY LI +R
Sbjct: 366 ILWNRSRSIDLTSKTAITSFYMFIWK--------LFYAEYLLIPLVR 404
>sp|Q8VWJ1|HPT1_ARATH Homogentisate phytyltransferase 1, chloroplastic OS=Arabidopsis
thaliana GN=VTE2-1 PE=2 SV=1
Length = 393
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 107/167 (64%), Gaps = 8/167 (4%)
Query: 1 MAPFTLVILMGLLLQIPFFIHSQTYVLGRPFIMTRSFIFTTAIMSIFAFVNGLLKDLPDV 60
+A ++ + +++QI F++H QT+V GRP + TR IF TA MS F+ V L KD+PD+
Sbjct: 235 VAAMCILAVRAIIVQIAFYLHIQTHVFGRPILFTRPLIFATAFMSFFSVVIALFKDIPDI 294
Query: 61 EGDKAFGMQTLCVLLGKEKVLPLCVNLMLIGYGGAIIAGSSSSSIISKLVTIIGHSILAF 120
EGDK FG+++ V LG+++V CV L+ + Y AI+ G++S I SK+++++GH ILA
Sbjct: 295 EGDKIFGIRSFSVTLGQKRVFWTCVTLLQMAYAVAILVGATSPFIWSKVISVVGHVILAT 354
Query: 121 MVWLRSRKVDLDSFESQFSFYMYLWKASDYSTSVLNYIEYFLIHFLR 167
+W R++ VDL S S YM++WK L Y EY L+ FL+
Sbjct: 355 TLWARAKSVDLSSKTEITSCYMFIWK--------LFYAEYLLLPFLK 393
>sp|B1B3P3|N8DT1_SOPFL Naringenin 8-dimethylallyltransferase 1, chloroplastic OS=Sophora
flavescens GN=N8DT-1 PE=1 SV=1
Length = 410
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 98/150 (65%), Gaps = 8/150 (5%)
Query: 18 FFIHSQTYVLGRPFIMTRSFIFTTAIMSIFAFVNGLLKDLPDVEGDKAFGMQTLCVLLGK 77
FF+H QT V RP R IF TAI+SI+A V L KD+PD+EGD+ FG+Q+L + LG
Sbjct: 269 FFLHMQTCVFKRPTTFPRPLIFCTAIVSIYAIVIALFKDIPDMEGDEKFGIQSLSLRLGP 328
Query: 78 EKVLPLCVNLMLIGYGGAIIAGSSSSSIISKLVTIIGHSILAFMVWLRSRKVDLDSFESQ 137
++V +CV+L+ + YG I+ G++S + SK++T++GH++LA ++W ++ VDL S
Sbjct: 329 KRVFWICVSLLEMTYGVTILVGATSPILWSKIITVLGHAVLASVLWYHAKSVDLTSNVVL 388
Query: 138 FSFYMYLWKASDYSTSVLNYIEYFLIHFLR 167
SFYM++WK L+ EYFLI R
Sbjct: 389 HSFYMFIWK--------LHTAEYFLIPLFR 410
>sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase OS=Glycine max GN=G4DT PE=1
SV=1
Length = 409
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 95/169 (56%), Gaps = 12/169 (7%)
Query: 3 PFTLVILM----GLLLQIPFFIHSQTYVLGRPFIMTRSFIFTTAIMSIFAFVNGLLKDLP 58
PF + M L L I +F H QT VL RP RS F A M+ ++ L KD+P
Sbjct: 249 PFVAAMCMISTWALALPISYFHHMQTVVLKRPIGFPRSLGFLVAFMTFYSLGLALSKDIP 308
Query: 59 DVEGDKAFGMQTLCVLLGKEKVLPLCVNLMLIGYGGAIIAGSSSSSIISKLVTIIGHSIL 118
DVEGDK G+ + V LG+++ +CV+ + +G I+AG+S S +K+ T +G+++L
Sbjct: 309 DVEGDKEHGIDSFAVRLGQKRAFWICVSFFEMAFGVGILAGASCSHFWTKIFTGMGNAVL 368
Query: 119 AFMVWLRSRKVDLDSFESQFSFYMYLWKASDYSTSVLNYIEYFLIHFLR 167
A ++W +++ VDL S SFYM++WK L Y +FL+ +R
Sbjct: 369 ASILWYQAKSVDLSDKASTGSFYMFIWK--------LLYAGFFLMALIR 409
>sp|Q1ACB3|HPT2_ARATH Homogentisate phytyltransferase 2, chloroplastic OS=Arabidopsis
thaliana GN=HPT2 PE=2 SV=1
Length = 386
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 21 HSQTYVLGRPFIMTRSFIFTTAIMSIFAFVNGLLKDLPDVEGDKAFGMQTLCVLLGKEKV 80
H+ LG PF + F T+ +++FA V + KDLPDVEGD+ F + TL LG +
Sbjct: 247 HATRAALGLPFQWSAPVAFITSFVTLFALVIAITKDLPDVEGDRKFQISTLATKLGVRNI 306
Query: 81 LPLCVNLMLIGYGGAIIAGSSSSSIISKLVTIIGHSILA----FMVWLRSRKVDLDSFES 136
L L+L+ Y AI + + I H ILA F W+ + E+
Sbjct: 307 AFLGSGLLLVNYVSAISLAFYMPQVFRGSLMIPAHVILASGLIFQTWVLEKANYTK--EA 364
Query: 137 QFSFYMYLWKASDYSTSVLNYIEYFLIHFL 166
+Y ++W L Y EY L FL
Sbjct: 365 ISGYYRFIWN--------LFYAEYLLFPFL 386
>sp|Q0D576|HPT2_ORYSJ Probable homogentisate phytyltransferase 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT2 PE=3 SV=2
Length = 379
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 8/131 (6%)
Query: 21 HSQTYVLGRPFIMTRSFIFTTAIMSIFAFVNGLLKDLPDVEGDKAFGMQTLCVLLGKEKV 80
++ LG F + F T +++FA V + KDLPDVEGD+ + + TL LG +
Sbjct: 240 YATRAALGLTFQWSSPVAFITCFVTLFALVIAITKDLPDVEGDRKYQISTLATKLGVRNI 299
Query: 81 LPLCVNLMLIGYGGAIIAGSSSSSIISKLVTIIGHSILA----FMVW-LRSRKVDLDSFE 135
L L++ Y AI + V + H+ LA F W L K D+
Sbjct: 300 AFLGSGLLIANYVAAIAVAFLMPQAFRRTVMVPVHAALAVGIIFQTWVLEQAKYTKDAIS 359
Query: 136 SQFSFYMYLWK 146
+Y ++W
Sbjct: 360 ---QYYRFIWN 367
>sp|Q8TZM7|DGGGP_PYRFU Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1963 PE=3 SV=1
Length = 277
Score = 38.1 bits (87), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 23/27 (85%)
Query: 53 LLKDLPDVEGDKAFGMQTLCVLLGKEK 79
++KD+ D+EGDKA G +TL +++G++K
Sbjct: 172 IMKDIEDIEGDKALGARTLPIIIGEKK 198
>sp|Q5W6H5|CHLG_ORYSJ Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica
GN=CHLG PE=2 SV=1
Length = 376
Score = 37.4 bits (85), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 33 MTRSFIFTTAIMSIFAFVNGLLKDLPDVEGDKAFGMQTLCVLLGKEKVLPLCVNLMLI 90
+T + T++ SI ++ D VEGD+A G+Q+L V G E +CV + I
Sbjct: 251 LTPDIVVLTSLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGMETAKWICVGAIDI 308
>sp|Q38833|CHLG_ARATH Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana GN=CHLG
PE=2 SV=1
Length = 387
Score = 36.6 bits (83), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 33 MTRSFIFTTAIMSIFAFVNGLLKDLPDVEGDKAFGMQTLCVLLGKEKVLPLCVNLMLI 90
+T + T + SI ++ D VEGD+A G+Q+L V G E +CV + I
Sbjct: 262 LTPDVVVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGTETAKWICVGAIDI 319
>sp|O57753|DGGGP_PYRHO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=PH0027 PE=3 SV=1
Length = 277
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 21/27 (77%)
Query: 53 LLKDLPDVEGDKAFGMQTLCVLLGKEK 79
++KD+ D EGDK G +TL +++GK+K
Sbjct: 172 IMKDIEDFEGDKRLGARTLPIMIGKKK 198
>sp|A7I9E7|DGGGP_METB6 Digeranylgeranylglyceryl phosphate synthase OS=Methanoregula boonei
(strain 6A8) GN=Mboo_1843 PE=3 SV=1
Length = 279
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 53 LLKDLPDVEGDKAFGMQTLCVLLGKEK 79
LLKD D+EGD+A G TL + +G K
Sbjct: 172 LLKDAEDIEGDRAHGADTLAIRIGVRK 198
>sp|Q9HRP0|DGGGP_HALSA Digeranylgeranylglyceryl phosphate synthase OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=VNG_0610G PE=3 SV=2
Length = 276
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 49 FVNGLLKDLPDVEGDKAFGMQTLCVLLGKEKVL 81
F ++KD+ D+ GD+A G++TL V++G ++ L
Sbjct: 169 FAREVIKDVEDLAGDRAAGLRTLPVVVGHQRAL 201
>sp|B0R3S1|DGGGP_HALS3 Digeranylgeranylglyceryl phosphate synthase OS=Halobacterium
salinarum (strain ATCC 29341 / DSM 671 / R1) GN=OE_1921R
PE=3 SV=1
Length = 276
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 49 FVNGLLKDLPDVEGDKAFGMQTLCVLLGKEKVL 81
F ++KD+ D+ GD+A G++TL V++G ++ L
Sbjct: 169 FAREVIKDVEDLAGDRAAGLRTLPVVVGHQRAL 201
>sp|Q5JDN5|DGGGP_PYRKO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=TK1957 PE=3 SV=1
Length = 277
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 22/27 (81%)
Query: 53 LLKDLPDVEGDKAFGMQTLCVLLGKEK 79
++KD+ D+EGD A G +TL +L+G+++
Sbjct: 172 VIKDIEDIEGDMAKGAKTLPILIGRKR 198
>sp|Q8TWS9|DGGGP_METKA Digeranylgeranylglyceryl phosphate synthase OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=MK0953 PE=3 SV=1
Length = 271
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 50 VNGLLKDLPDVEGDKAFGMQTLCVLLGK 77
V +LKDL DVEGD A G++TL + G+
Sbjct: 165 VREILKDLEDVEGDAALGLKTLPIAYGE 192
>sp|Q3INH7|DGGGP_NATPD Digeranylgeranylglyceryl phosphate synthase OS=Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678) GN=NP_4470A
PE=3 SV=1
Length = 277
Score = 34.3 bits (77), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 24/29 (82%)
Query: 53 LLKDLPDVEGDKAFGMQTLCVLLGKEKVL 81
++KD+ D++GD+A G++TL +++G+ + L
Sbjct: 173 IVKDVEDIDGDRAEGLRTLPIVIGERRSL 201
>sp|Q9M3W5|CHLG_AVESA Chlorophyll synthase, chloroplastic OS=Avena sativa GN=CHLG PE=1
SV=1
Length = 378
Score = 33.9 bits (76), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 33 MTRSFIFTTAIMSIFAFVNGLLKDLPDVEGDKAFGMQTLCVLLGKEKVLPLCVNLMLI 90
+T + T + SI ++ D +EGD+ G+Q+L V G E +CV + I
Sbjct: 253 LTPDIVVLTCLYSIAGLGIAIVNDFKSIEGDRTLGLQSLPVAFGMETAKWICVGAIDI 310
>sp|B6YW76|DGGGP_THEON Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
onnurineus (strain NA1) GN=TON_1950 PE=3 SV=1
Length = 276
Score = 33.5 bits (75), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 21/27 (77%)
Query: 53 LLKDLPDVEGDKAFGMQTLCVLLGKEK 79
++KD+ DVEGD A G +TL ++ GK++
Sbjct: 172 VIKDIEDVEGDMAKGAKTLPIIWGKKR 198
>sp|Q18J00|DGGGP_HALWD Digeranylgeranylglyceryl phosphate synthase OS=Haloquadratum
walsbyi (strain DSM 16790) GN=HQ_1884A PE=3 SV=1
Length = 286
Score = 33.5 bits (75), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 21/101 (20%)
Query: 53 LLKDLPDVEGDKAFGMQTLCVLLGKEKVLPLCVNLMLIGYGGAIIAGSSSSSIISKLVTI 112
++KD+ D++GD+ G+QTL +++G + ++L+ A+IA SI+ ++ I
Sbjct: 180 IIKDIEDLDGDRKEGLQTLPIVIGVTPAYRVATGVLLV----AVIA-----SIVPYVIGI 230
Query: 113 IGHSILAFMVWLRSRKVDLDSFESQFSFYMYLWKASDYSTS 153
G +W + V D + +W+A D T
Sbjct: 231 FG-------IWYLTLVVPADMI-----MLIGVWQAPDNPTQ 259
>sp|Q2NGM1|DGGGP_METST Digeranylgeranylglyceryl phosphate synthase OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=Msp_0634 PE=3 SV=1
Length = 272
Score = 33.5 bits (75), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 43 IMSIFAFV----NGLLKDLPDVEGDKAFGMQTLCVLLGKEKVLPLCVNLMLI 90
I+ FAF+ ++KD+ D+EGDK TL ++ G +K + L V L +I
Sbjct: 153 ILGFFAFLMTLSREIIKDIEDIEGDKKEDAHTLPIIYGTKKAVMLAVILNII 204
>sp|Q9V2P5|DGGGP_PYRAB Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB00300 PE=3 SV=2
Length = 277
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 20/27 (74%)
Query: 53 LLKDLPDVEGDKAFGMQTLCVLLGKEK 79
++KD+ D+EGD G +TL +++GK +
Sbjct: 172 IMKDIEDIEGDMKMGAKTLPIIIGKRR 198
>sp|Q9Z5D6|BCHG_RHOS4 Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=bchG PE=4 SV=1
Length = 302
Score = 33.1 bits (74), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 16 IPFFIHSQTYVLGRPFIMTRSFIFTTAIMSIFAFVNGL--LKDLPDVEGDKAFGMQTLCV 73
+P+F + G P FI T A++ F +G+ L D +EGD+ G+++L V
Sbjct: 159 LPWFTGAAVLSAGAPSF----FIVTVALLYAFG-AHGIMTLNDFKALEGDRQHGVRSLPV 213
Query: 74 LLGKEKVLPLCVNLM----------LIGYGGAIIAGSSSSSIISKL 109
+LG E L +M L+ +G I AG ++ ++++L
Sbjct: 214 MLGPEVAAKLACTVMAMAQILVITLLVIWGKPIHAGIITALLVAQL 259
>sp|Q4J8K2|DGGGP_SULAC Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=Saci_1565 PE=3 SV=1
Length = 275
Score = 33.1 bits (74), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 36 SFIFTTAIMSIFAFVNGLLKDLPDVEGDKAFGMQTLCVLLGKE 78
+FI T + F +K + D+EGDK G+ TL V LG++
Sbjct: 155 NFIIPTIYIFFFTLSREFVKGIEDIEGDKRNGVNTLAVKLGEK 197
>sp|C5A1J7|DGGGP_THEGJ Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=TGAM_1764 PE=3 SV=1
Length = 276
Score = 33.1 bits (74), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 53 LLKDLPDVEGDKAFGMQTLCVLLGKEK 79
++KD+ DVEGD G +TL ++LG+ K
Sbjct: 172 IVKDIEDVEGDLKKGAKTLPIILGRRK 198
>sp|A3CW74|DGGGP_METMJ Digeranylgeranylglyceryl phosphate synthase OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
GN=Memar_1697 PE=3 SV=1
Length = 279
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 53 LLKDLPDVEGDKAFGMQTLCVLLGKEK 79
LLKD DV+GD A G +TL +++G K
Sbjct: 172 LLKDAEDVDGDAAGGARTLPMIVGVRK 198
>sp|C6A2C9|DGGGP_THESM Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
sibiricus (strain MM 739 / DSM 12597) GN=TSIB_0711 PE=3
SV=1
Length = 279
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 53 LLKDLPDVEGDKAFGMQTLCVLLGKE 78
+ KD+ D+EGDKA G +TL ++ G E
Sbjct: 172 IFKDIEDIEGDKAQGAKTLPIVWGIE 197
>sp|P17628|YSP1_LEPIR Uncharacterized 35 kDa protein in sph 3'region OS=Leptospira
interrogans PE=4 SV=1
Length = 303
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 59 DVEGDKAFGMQTLCVLLGKEKVLPLCVNLMLIGYGGAIIAGSSSSSIISKLVTI--IGHS 116
D +G+ FG++TL +L G + PL ++ G + S S + SK+ T+ +G
Sbjct: 201 DKQGNDKFGIETLSLLPGMKYYFPLSESIFWFTQVGLGVGKSIESGVHSKVQTVLFVGTG 260
Query: 117 ILA------FMVWLRSRKVDL 131
I F + L+ RK DL
Sbjct: 261 IQWELESYFFNIALQYRKTDL 281
>sp|A0PXP5|HIS8_CLONN Histidinol-phosphate aminotransferase OS=Clostridium novyi (strain
NT) GN=hisC PE=3 SV=1
Length = 356
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 17 PFFIHSQTYVLGRPFIMTRSFIFTTAIMSIFAFVNGLLKDLPDVEGDKAFGMQTLCVLLG 76
PF ++S + V+G + + FI +I + N LLK+L ++G K + ++ VL+
Sbjct: 241 PFNVNSVSQVIGEIILKDKDFI-RESIDKVLYERNYLLKELKKIDGLKVYETKSNFVLIY 299
Query: 77 KEKVLPLCVNLMLIG 91
E + +L+ IG
Sbjct: 300 NENANEINESLIKIG 314
>sp|O27170|DGGGP_METTH Digeranylgeranylglyceryl phosphate synthase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_1098 PE=1 SV=1
Length = 281
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 53 LLKDLPDVEGDKAFGMQTLCVLLGKEKVLPLCVNLMLI 90
++KD+ DVEGD+A G TL + G L + MLI
Sbjct: 167 IVKDMEDVEGDRAEGATTLPITHGMRISGVLAASFMLI 204
>sp|Q12VF3|DGGGP_METBU Digeranylgeranylglyceryl phosphate synthase OS=Methanococcoides
burtonii (strain DSM 6242) GN=Mbur_1679 PE=3 SV=1
Length = 281
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%)
Query: 53 LLKDLPDVEGDKAFGMQTLCVLLGKEK 79
++KD+ D+ GDK G +TL +L+G +K
Sbjct: 180 IVKDVEDIVGDKKDGARTLPILIGAKK 206
>sp|A1CBE6|ALG3_ASPCL Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase
OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 /
DSM 816 / NCTC 3887 / NRRL 1) GN=alg3 PE=3 SV=1
Length = 472
Score = 31.2 bits (69), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 5 TLVILMGLLLQIPFFIHSQTYVLGRPFIMTRSFIF 39
L +L+ +LL IPF H+ + R F +TR F+F
Sbjct: 271 ALAVLIQILLGIPFLSHNTAGYIARSFELTRQFMF 305
>sp|A0B8A0|DGGGP_METTP Digeranylgeranylglyceryl phosphate synthase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=Mthe_1142 PE=3
SV=1
Length = 267
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 41 TAIMSIFAFVNGL----LKDLPDVEGDKAFGMQTLCVLLGKEK 79
TA +SI + + L +KD+ D+ GD A G +TL +GK K
Sbjct: 153 TAFLSILSALATLSREIVKDIEDLPGDLAHGAKTLPAFIGKRK 195
>sp|Q08684|PSBC_CHLMO Photosystem II CP43 chlorophyll apoprotein OS=Chlamydomonas
moewusii GN=psbC PE=3 SV=1
Length = 461
Score = 30.4 bits (67), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 90 IGYGGAIIAGSSSSSIISKLVTIIGHSILAFMVWLRSRKVDLDSFESQFSFYMYLWKASD 149
+G GG +I + +S ++ +I ++L F + + ++ E F F+ Y+WK +
Sbjct: 87 VGPGGEVI--DTFPYFVSGVLHLISSAVLGFGG-VYHSLIGPETLEESFPFFGYIWKDKN 143
Query: 150 YSTSVLNY 157
TS+L Y
Sbjct: 144 KMTSILGY 151
>sp|Q971A3|DGGGP_SULTO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
GN=STK_14510 PE=3 SV=1
Length = 278
Score = 30.4 bits (67), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 47 FAFVNGLLKDLPDVEGDKAFGMQTLCVLLGKEK 79
F +K + DV+GD G++TL V +G EK
Sbjct: 169 FTLTREFVKGIEDVKGDMTNGVKTLAVRVGIEK 201
>sp|Q46BD9|DGGGP_METBF Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=Mbar_A1863 PE=3
SV=1
Length = 289
Score = 30.4 bits (67), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 53 LLKDLPDVEGDKAFGMQTLCVLLGKEKV 80
++KD+ D+EGDK G TL + +G +K
Sbjct: 188 IVKDIEDMEGDKMEGADTLPLRVGAKKA 215
>sp|P75551|OPPF_MYCPN Oligopeptide transport ATP-binding protein OppF OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=oppF PE=3 SV=1
Length = 851
Score = 30.0 bits (66), Expect = 6.2, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 12/128 (9%)
Query: 26 VLGRPFIMTRSFIFTTAIMSIFAFVNGLLKDLPDVEGDKAFGMQTLCVLLGKEKVLPLCV 85
++ +P ++ + + +SI A V +LKDL K + L + V +C
Sbjct: 702 LITKPKLIIADELISALDVSIQAQVINILKDLA-----KKHNLTVLFIAHDLSMVQTVC- 755
Query: 86 NLMLIGYGGAIIAGSSSSSIISKLVTIIGHSILAFMVWLRSRKVDLDSFESQFSFYMYLW 145
N ++I + G I+ S+ I + V S++ L +DL SF+ +F++
Sbjct: 756 NRLIIMHRGKIVERGSTDEIFAHPVHPYTRSLIKASPKLSKINIDLASFDEKFTY----- 810
Query: 146 KASDYSTS 153
SDYS +
Sbjct: 811 -DSDYSLT 817
>sp|B3CRE9|MURG_ORITI UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Orientia tsutsugamushi (strain Ikeda)
GN=murG PE=3 SV=1
Length = 359
Score = 30.0 bits (66), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 7 VILMGLLLQIPFFIHSQTYVLGRPFIMTRSFI-FTTAIMSIFA 48
+I+ G+L +IPF +H Q VLG + R F+ + AI FA
Sbjct: 105 IIINGILFKIPFILHEQNSVLG---LANRLFLRYAKAITVTFA 144
>sp|A5CEL6|MURG_ORITB UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Orientia tsutsugamushi (strain Boryong)
GN=murG PE=3 SV=1
Length = 359
Score = 30.0 bits (66), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 7 VILMGLLLQIPFFIHSQTYVLGRPFIMTRSFI-FTTAIMSIFA 48
+I+ G+L +IPF +H Q VLG + R F+ + AI FA
Sbjct: 105 IIINGILFRIPFILHEQNSVLG---LANRLFLRYAKAITVTFA 144
>sp|P47326|OPPF_MYCGE Oligopeptide transport ATP-binding protein OppF OS=Mycoplasma
genitalium (strain ATCC 33530 / G-37 / NCTC 10195)
GN=oppF PE=3 SV=1
Length = 848
Score = 30.0 bits (66), Expect = 7.8, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Query: 26 VLGRPFIMTRSFIFTTAIMSIFAFVNGLLKDLPDVEGDKAFGMQTLCVLLGKEKVLPLCV 85
++ +P ++ + + +SI A V +LKDL K + L + V +C
Sbjct: 699 LITKPKLIIADELISALDVSIQAQVINILKDLA-----KKHNLTVLFIAHDLSMVQTVC- 752
Query: 86 NLMLIGYGGAIIAGSSSSSIISKLVTIIGHSILAFMVWLRSRKVDLDSFESQFSFYMYLW 145
N ++I + G I+ S I S V S++ L VDL SF+ F++
Sbjct: 753 NRLIIMHRGKIVERGSVDEIFSNPVHPYTRSLIKASPKLSKINVDLASFDENFTY----- 807
Query: 146 KASDYSTSVLNY 157
SDYS + + +
Sbjct: 808 -DSDYSLTNMPF 818
>sp|A2SRL0|DGGGP_METLZ Digeranylgeranylglyceryl phosphate synthase OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
GN=Mlab_0795 PE=3 SV=1
Length = 282
Score = 30.0 bits (66), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 53 LLKDLPDVEGDKAFGMQTLCVLLGKEKVLPLCVNLML 89
LLKD D+EGD+ G +TL + +G K L V +L
Sbjct: 172 LLKDAEDIEGDRLGGARTLPMQIGVRKTSVLAVIFVL 208
>sp|P39582|MENA_BACSU Probable 1,4-dihydroxy-2-naphthoate octaprenyltransferase
OS=Bacillus subtilis (strain 168) GN=menA PE=3 SV=1
Length = 311
Score = 29.6 bits (65), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 16 IPFFIHSQTYVLGRPFIMTRSFIFTTAIMSIFAFVNGLLKDLPDVEGDKAFGMQTLCVLL 75
I FFI + I +S + + I + +N L ++ D+E DK G +TL +L+
Sbjct: 173 ISFFIQTDK-------INMQSILISIPIAILVGAIN-LSNNIRDIEEDKKGGRKTLAILM 224
Query: 76 GKEKVLPLCVNLMLIGY---GGAIIAGSSS 102
G + + L + Y G +I G++S
Sbjct: 225 GHKGAVTLLAASFAVAYIWVVGLVITGAAS 254
>sp|P38147|CHK1_YEAST Serine/threonine-protein kinase CHK1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CHK1 PE=1 SV=1
Length = 527
Score = 29.6 bits (65), Expect = 8.9, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 60 VEGDKAFGMQTLCVLLGKEKVLPLCVNLMLIGYGGAIIAGSSSSSIISKLVTIIG 114
V+ D + LC LLG + V PL +N+ GG + GS S I + + +G
Sbjct: 443 VKPDLFANFERLCELLGYDNVFPLIINIKTKSNGGYQLCGSISIIKIEEELKSVG 497
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.332 0.145 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,619,143
Number of Sequences: 539616
Number of extensions: 2063733
Number of successful extensions: 6202
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 6166
Number of HSP's gapped (non-prelim): 59
length of query: 167
length of database: 191,569,459
effective HSP length: 109
effective length of query: 58
effective length of database: 132,751,315
effective search space: 7699576270
effective search space used: 7699576270
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 57 (26.6 bits)