Query 046340
Match_columns 715
No_of_seqs 477 out of 4712
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 11:05:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046340.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046340hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 3.1E-78 6.7E-83 711.6 49.9 688 1-714 55-752 (968)
2 PLN00113 leucine-rich repeat r 100.0 3.6E-58 7.7E-63 541.5 36.0 516 39-567 68-586 (968)
3 KOG4194 Membrane glycoprotein 100.0 1.4E-42 3E-47 344.5 6.3 374 164-549 82-459 (873)
4 KOG4194 Membrane glycoprotein 100.0 8.4E-42 1.8E-46 339.1 6.5 366 41-417 79-448 (873)
5 KOG0472 Leucine-rich repeat pr 100.0 2E-41 4.4E-46 322.1 -16.3 482 60-565 41-541 (565)
6 KOG0472 Leucine-rich repeat pr 100.0 8.8E-41 1.9E-45 317.7 -17.0 476 40-542 45-541 (565)
7 KOG0618 Serine/threonine phosp 100.0 1.1E-37 2.3E-42 326.6 -6.7 484 21-541 3-488 (1081)
8 KOG0618 Serine/threonine phosp 100.0 1.4E-36 3E-41 318.2 -4.9 487 18-539 23-510 (1081)
9 KOG0444 Cytoskeletal regulator 100.0 3E-33 6.6E-38 280.2 -4.0 364 39-420 6-374 (1255)
10 KOG0444 Cytoskeletal regulator 100.0 4.1E-33 8.8E-38 279.3 -4.3 370 63-450 6-379 (1255)
11 KOG4237 Extracellular matrix p 99.9 5.3E-30 1.2E-34 244.2 -5.4 289 4-299 53-358 (498)
12 KOG4237 Extracellular matrix p 99.9 4.4E-29 9.4E-34 238.0 -3.8 401 114-539 69-498 (498)
13 PLN03210 Resistant to P. syrin 99.9 1.1E-22 2.5E-27 239.9 25.9 313 90-418 591-903 (1153)
14 PLN03210 Resistant to P. syrin 99.9 7.9E-22 1.7E-26 232.8 24.9 126 384-515 778-903 (1153)
15 PRK15387 E3 ubiquitin-protein 99.8 3E-20 6.4E-25 203.0 16.7 263 42-380 203-465 (788)
16 PRK15387 E3 ubiquitin-protein 99.8 3.4E-20 7.3E-25 202.5 16.8 263 211-525 203-465 (788)
17 PRK15370 E3 ubiquitin-protein 99.7 1E-17 2.2E-22 184.6 13.3 203 16-246 178-380 (754)
18 PRK15370 E3 ubiquitin-protein 99.7 4.6E-17 9.9E-22 179.5 14.3 204 288-518 221-428 (754)
19 cd00116 LRR_RI Leucine-rich re 99.7 5.7E-19 1.2E-23 181.7 -0.7 280 20-323 2-318 (319)
20 cd00116 LRR_RI Leucine-rich re 99.7 7.8E-19 1.7E-23 180.7 -0.6 280 44-348 2-319 (319)
21 KOG0617 Ras suppressor protein 99.7 1.2E-18 2.6E-23 147.7 -4.7 164 35-204 28-192 (264)
22 KOG0617 Ras suppressor protein 99.7 6.9E-18 1.5E-22 143.1 -1.6 158 332-495 29-187 (264)
23 KOG1187 Serine/threonine prote 99.5 1.5E-13 3.3E-18 140.6 8.9 81 632-715 61-141 (361)
24 PLN03150 hypothetical protein; 99.4 7.2E-13 1.6E-17 146.2 8.6 111 458-568 419-531 (623)
25 PLN03150 hypothetical protein; 99.4 1.9E-12 4.2E-17 142.9 11.0 120 5-124 403-527 (623)
26 KOG0532 Leucine-rich repeat (L 99.2 7.3E-13 1.6E-17 133.7 -2.6 193 317-519 55-248 (722)
27 PF14580 LRR_9: Leucine-rich r 99.2 1.5E-11 3.2E-16 110.5 3.9 111 35-149 14-126 (175)
28 KOG3207 Beta-tubulin folding c 99.2 2.8E-12 6.1E-17 125.6 -0.8 163 61-223 118-285 (505)
29 KOG0532 Leucine-rich repeat (L 99.1 1.7E-12 3.6E-17 131.2 -4.2 192 314-516 77-271 (722)
30 KOG1259 Nischarin, modulator o 99.1 7.9E-12 1.7E-16 116.3 0.3 133 408-547 284-417 (490)
31 KOG3207 Beta-tubulin folding c 99.1 9.9E-12 2.1E-16 121.9 0.2 208 208-421 120-339 (505)
32 PF14580 LRR_9: Leucine-rich r 99.1 4.4E-11 9.6E-16 107.5 4.3 124 16-144 19-148 (175)
33 KOG1909 Ran GTPase-activating 99.1 5.1E-12 1.1E-16 120.6 -1.9 207 16-222 30-283 (382)
34 COG4886 Leucine-rich repeat (L 99.1 1.1E-10 2.4E-15 123.5 7.6 197 316-546 97-294 (394)
35 COG4886 Leucine-rich repeat (L 99.1 1E-10 2.2E-15 123.8 6.6 200 290-524 96-296 (394)
36 KOG1909 Ran GTPase-activating 99.1 3.8E-12 8.2E-17 121.4 -3.9 190 331-541 87-310 (382)
37 KOG1026 Nerve growth factor re 99.0 1.2E-10 2.7E-15 124.3 3.5 71 645-715 485-559 (774)
38 KOG1259 Nischarin, modulator o 99.0 3E-11 6.6E-16 112.5 -1.3 128 64-197 284-412 (490)
39 KOG0196 Tyrosine kinase, EPH ( 99.0 4.4E-10 9.6E-15 118.0 5.6 80 636-715 610-700 (996)
40 PF13855 LRR_8: Leucine rich r 98.9 5.7E-10 1.2E-14 82.3 3.2 60 40-99 1-60 (61)
41 KOG4658 Apoptotic ATPase [Sign 98.9 1.4E-09 3E-14 122.8 7.1 129 16-147 523-653 (889)
42 KOG0531 Protein phosphatase 1, 98.9 2.7E-10 6E-15 120.5 1.0 215 314-542 74-290 (414)
43 PF13855 LRR_8: Leucine rich r 98.9 8.4E-10 1.8E-14 81.4 3.0 61 481-541 1-61 (61)
44 KOG0531 Protein phosphatase 1, 98.9 1.5E-10 3.3E-15 122.4 -2.5 130 61-197 69-199 (414)
45 KOG0595 Serine/threonine-prote 98.9 3E-09 6.4E-14 104.1 6.0 70 644-715 8-79 (429)
46 KOG0194 Protein tyrosine kinas 98.8 4E-09 8.7E-14 109.0 5.5 75 641-715 152-231 (474)
47 KOG4658 Apoptotic ATPase [Sign 98.8 4.3E-09 9.4E-14 118.8 5.1 133 36-171 519-653 (889)
48 KOG0192 Tyrosine kinase specif 98.8 9.1E-09 2E-13 104.7 6.2 64 649-715 44-109 (362)
49 KOG4278 Protein tyrosine kinas 98.8 2.8E-09 6E-14 109.0 2.2 75 638-715 259-333 (1157)
50 KOG0197 Tyrosine kinases [Sign 98.7 5E-09 1.1E-13 106.5 3.6 73 639-715 199-271 (468)
51 KOG2052 Activin A type IB rece 98.7 3.8E-08 8.2E-13 97.4 8.9 61 646-713 211-273 (513)
52 KOG1094 Discoidin domain recep 98.7 2.4E-08 5.2E-13 101.9 6.5 65 648-715 540-605 (807)
53 KOG1025 Epidermal growth facto 98.7 1.4E-08 3.1E-13 107.5 4.5 67 648-714 698-767 (1177)
54 KOG0600 Cdc2-related protein k 98.7 2E-08 4.4E-13 100.9 4.8 67 646-714 117-185 (560)
55 KOG0193 Serine/threonine prote 98.6 3.2E-08 6.9E-13 101.7 5.0 73 638-715 384-458 (678)
56 KOG0593 Predicted protein kina 98.6 1.6E-08 3.6E-13 94.9 2.6 65 647-713 3-69 (396)
57 KOG3653 Transforming growth fa 98.6 1.1E-08 2.4E-13 101.9 1.4 60 647-713 211-272 (534)
58 KOG0580 Serine/threonine prote 98.6 1.2E-08 2.6E-13 92.7 1.3 70 643-714 19-91 (281)
59 KOG0659 Cdk activating kinase 98.6 3.6E-08 7.8E-13 91.0 4.2 65 647-713 3-69 (318)
60 KOG1095 Protein tyrosine kinas 98.6 8.6E-08 1.9E-12 107.0 6.9 68 648-715 694-765 (1025)
61 KOG2120 SCF ubiquitin ligase, 98.5 1.3E-09 2.8E-14 101.9 -7.0 141 4-149 125-273 (419)
62 KOG4257 Focal adhesion tyrosin 98.5 1E-07 2.2E-12 98.0 4.9 70 646-715 389-461 (974)
63 KOG1859 Leucine-rich repeat pr 98.5 6.8E-09 1.5E-13 108.4 -4.4 180 377-567 102-294 (1096)
64 KOG0199 ACK and related non-re 98.5 1.6E-07 3.6E-12 97.9 5.4 65 650-714 114-180 (1039)
65 KOG0663 Protein kinase PITSLRE 98.5 1.7E-07 3.6E-12 89.5 4.9 68 645-714 75-144 (419)
66 KOG0575 Polo-like serine/threo 98.5 3E-07 6.4E-12 95.1 7.0 67 646-714 18-87 (592)
67 KOG0658 Glycogen synthase kina 98.5 2.6E-07 5.6E-12 89.7 6.2 62 647-714 25-86 (364)
68 KOG0591 NIMA (never in mitosis 98.4 4E-08 8.7E-13 91.3 -0.3 66 645-712 18-85 (375)
69 KOG1859 Leucine-rich repeat pr 98.4 4.1E-09 8.9E-14 110.0 -7.6 21 33-53 102-122 (1096)
70 KOG0597 Serine-threonine prote 98.4 1.8E-07 3.9E-12 95.3 3.1 66 646-713 2-69 (808)
71 KOG2120 SCF ubiquitin ligase, 98.4 7.6E-09 1.7E-13 96.8 -6.2 177 210-394 186-373 (419)
72 KOG0585 Ca2+/calmodulin-depend 98.3 9E-07 1.9E-11 88.6 6.7 70 642-713 93-176 (576)
73 KOG0615 Serine/threonine prote 98.3 6.8E-07 1.5E-11 87.9 5.8 67 646-714 172-245 (475)
74 cd06624 STKc_ASK Catalytic dom 98.3 8.7E-07 1.9E-11 88.5 6.7 72 641-714 3-74 (268)
75 PF07714 Pkinase_Tyr: Protein 98.3 8.1E-07 1.8E-11 88.1 6.0 64 651-714 4-70 (259)
76 KOG2982 Uncharacterized conser 98.3 8.3E-08 1.8E-12 89.9 -1.5 186 335-542 70-262 (418)
77 KOG0662 Cyclin-dependent kinas 98.3 6.9E-07 1.5E-11 77.3 3.9 65 647-713 3-69 (292)
78 cd05108 PTKc_EGFR Catalytic do 98.2 1.9E-06 4.1E-11 88.4 7.2 70 646-715 7-79 (316)
79 cd05096 PTKc_DDR1 Catalytic do 98.2 2.1E-06 4.5E-11 87.6 7.0 69 646-714 5-88 (304)
80 cd05104 PTKc_Kit Catalytic dom 98.2 1.6E-06 3.4E-11 91.1 6.1 70 645-714 34-108 (375)
81 cd05105 PTKc_PDGFR_alpha Catal 98.2 2.1E-06 4.5E-11 90.5 6.6 73 642-714 33-110 (400)
82 KOG0577 Serine/threonine prote 98.2 1.4E-06 3.1E-11 89.3 5.0 65 648-714 28-95 (948)
83 cd05102 PTKc_VEGFR3 Catalytic 98.2 1.2E-06 2.7E-11 90.7 4.8 71 644-714 5-80 (338)
84 KOG1035 eIF-2alpha kinase GCN2 98.2 6.7E-07 1.5E-11 99.5 2.4 69 644-714 477-546 (1351)
85 KOG2982 Uncharacterized conser 98.2 1.6E-07 3.5E-12 88.1 -2.1 79 313-391 200-286 (418)
86 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 98.2 3.4E-06 7.5E-11 85.0 7.3 68 647-714 5-74 (284)
87 KOG0581 Mitogen-activated prot 98.2 3.8E-06 8.3E-11 81.9 7.1 65 648-714 81-146 (364)
88 KOG4579 Leucine-rich repeat (L 98.2 7.2E-08 1.6E-12 79.7 -4.0 133 409-546 28-163 (177)
89 cd05107 PTKc_PDGFR_beta Cataly 98.2 2.6E-06 5.6E-11 89.8 6.5 74 641-714 32-110 (401)
90 cd05075 PTKc_Axl Catalytic dom 98.2 4.4E-06 9.6E-11 83.6 7.5 66 649-714 2-69 (272)
91 cd05064 PTKc_EphR_A10 Catalyti 98.2 3.9E-06 8.4E-11 83.7 7.0 69 646-714 5-75 (266)
92 PHA02988 hypothetical protein; 98.2 3.7E-06 8E-11 84.6 6.9 59 652-714 26-87 (283)
93 COG5238 RNA1 Ran GTPase-activa 98.1 2.5E-07 5.4E-12 85.7 -1.6 113 285-397 155-285 (388)
94 KOG0201 Serine/threonine prote 98.1 1.9E-06 4.2E-11 85.5 4.2 68 645-714 12-80 (467)
95 KOG4250 TANK binding protein k 98.1 8.6E-07 1.9E-11 93.3 1.9 64 648-713 15-79 (732)
96 cd07871 STKc_PCTAIRE3 Catalyti 98.1 5.9E-06 1.3E-10 83.5 7.7 67 646-714 5-72 (288)
97 COG5238 RNA1 Ran GTPase-activa 98.1 2.6E-07 5.6E-12 85.6 -2.6 215 283-517 26-284 (388)
98 cd05087 PTKc_Aatyk1_Aatyk3 Cat 98.1 8E-06 1.7E-10 81.6 7.8 63 652-714 1-64 (269)
99 KOG1644 U2-associated snRNP A' 98.1 7.9E-06 1.7E-10 72.8 6.3 80 42-125 21-101 (233)
100 PTZ00263 protein kinase A cata 98.1 6.2E-06 1.4E-10 85.0 6.7 68 645-714 17-87 (329)
101 cd05035 PTKc_Axl_like Catalyti 98.1 8.3E-06 1.8E-10 81.6 7.5 67 648-714 1-70 (273)
102 cd05076 PTK_Tyk2_rpt1 Pseudoki 98.1 4.5E-06 9.8E-11 83.6 5.4 62 653-714 2-85 (274)
103 cd05033 PTKc_EphR Catalytic do 98.1 8.2E-06 1.8E-10 81.3 7.3 69 646-714 4-74 (266)
104 cd05148 PTKc_Srm_Brk Catalytic 98.1 3.7E-06 7.9E-11 83.6 4.7 70 642-714 2-71 (261)
105 cd06646 STKc_MAP4K5 Catalytic 98.1 9.5E-06 2.1E-10 80.9 7.7 68 645-714 8-75 (267)
106 cd05106 PTKc_CSF-1R Catalytic 98.1 4.9E-06 1.1E-10 87.3 5.9 74 641-714 33-111 (374)
107 KOG0032 Ca2+/calmodulin-depend 98.1 7.1E-06 1.5E-10 84.6 6.8 68 645-714 34-105 (382)
108 KOG0598 Ribosomal protein S6 k 98.1 3.3E-06 7.2E-11 82.3 4.0 69 643-713 22-93 (357)
109 PLN00034 mitogen-activated pro 98.0 7.6E-06 1.7E-10 85.3 7.0 67 646-714 74-141 (353)
110 cd06650 PKc_MEK1 Catalytic dom 98.0 8.8E-06 1.9E-10 84.0 7.4 68 645-714 4-72 (333)
111 KOG0594 Protein kinase PCTAIRE 98.0 5.5E-06 1.2E-10 80.7 5.4 67 646-714 11-80 (323)
112 cd05626 STKc_LATS2 Catalytic d 98.0 7.4E-06 1.6E-10 86.4 6.9 66 647-714 2-70 (381)
113 cd05599 STKc_NDR_like Catalyti 98.0 6.8E-06 1.5E-10 86.1 6.6 67 646-714 1-70 (364)
114 cd05114 PTKc_Tec_Rlk Catalytic 98.0 8.9E-06 1.9E-10 80.5 7.0 65 646-714 4-68 (256)
115 cd07872 STKc_PCTAIRE2 Catalyti 98.0 1.1E-05 2.3E-10 82.5 7.7 67 646-714 6-73 (309)
116 cd05116 PTKc_Syk Catalytic dom 98.0 1.2E-05 2.6E-10 79.7 7.8 62 653-714 2-65 (257)
117 cd07869 STKc_PFTAIRE1 Catalyti 98.0 1E-05 2.3E-10 82.3 7.6 68 645-714 4-72 (303)
118 cd07868 STKc_CDK8 Catalytic do 98.0 1.1E-05 2.5E-10 82.7 7.7 62 651-714 6-67 (317)
119 cd05103 PTKc_VEGFR2 Catalytic 98.0 5.8E-06 1.3E-10 85.8 5.6 70 645-714 6-80 (343)
120 PTZ00426 cAMP-dependent protei 98.0 7.9E-06 1.7E-10 84.5 6.5 69 645-714 29-100 (340)
121 cd07867 STKc_CDC2L6 Catalytic 98.0 1.2E-05 2.6E-10 82.5 7.7 61 652-714 7-67 (317)
122 cd06649 PKc_MEK2 Catalytic dom 98.0 1.1E-05 2.3E-10 83.3 7.3 68 645-714 4-72 (331)
123 cd05074 PTKc_Tyro3 Catalytic d 98.0 1.2E-05 2.6E-10 80.4 7.5 67 648-714 1-70 (273)
124 cd05068 PTKc_Frk_like Catalyti 98.0 9E-06 2E-10 80.8 6.4 67 644-714 4-70 (261)
125 PF13306 LRR_5: Leucine rich r 98.0 1.5E-05 3.3E-10 69.3 7.1 106 34-144 6-111 (129)
126 cd05049 PTKc_Trk Catalytic dom 98.0 8E-06 1.7E-10 82.1 6.0 69 646-714 5-77 (280)
127 KOG4579 Leucine-rich repeat (L 98.0 1.9E-07 4.2E-12 77.2 -4.6 106 18-125 29-136 (177)
128 cd06637 STKc_TNIK Catalytic do 98.0 9.9E-06 2.2E-10 81.0 6.6 70 642-714 2-72 (272)
129 cd06619 PKc_MKK5 Catalytic dom 98.0 1.4E-05 3.1E-10 80.2 7.8 66 647-714 2-68 (279)
130 PF13306 LRR_5: Leucine rich r 98.0 1.9E-05 4E-10 68.8 7.5 124 57-186 5-128 (129)
131 cd05600 STKc_Sid2p_Dbf2p Catal 98.0 1.1E-05 2.3E-10 83.5 7.0 66 647-714 2-70 (333)
132 cd06638 STKc_myosinIIIA Cataly 98.0 8.2E-06 1.8E-10 82.3 5.9 76 636-714 8-84 (286)
133 cd05042 PTKc_Aatyk Catalytic d 98.0 1.5E-05 3.2E-10 79.6 7.7 63 652-714 1-64 (269)
134 cd05115 PTKc_Zap-70 Catalytic 98.0 1.4E-05 2.9E-10 79.3 7.3 62 653-714 2-64 (257)
135 cd06611 STKc_SLK_like Catalyti 98.0 9.2E-06 2E-10 81.7 6.1 67 646-714 5-71 (280)
136 cd07848 STKc_CDKL5 Catalytic d 98.0 9.6E-06 2.1E-10 81.9 6.3 66 647-714 2-69 (287)
137 cd07853 STKc_NLK Catalytic dom 98.0 8.8E-06 1.9E-10 85.5 6.1 66 647-714 1-68 (372)
138 cd05612 STKc_PRKX_like Catalyt 98.0 6.6E-06 1.4E-10 83.2 4.9 66 647-714 2-70 (291)
139 cd05052 PTKc_Abl Catalytic dom 98.0 9.2E-06 2E-10 80.8 5.9 67 646-715 6-72 (263)
140 cd05062 PTKc_IGF-1R Catalytic 98.0 1E-05 2.3E-10 81.1 6.2 72 643-714 3-78 (277)
141 cd07859 STKc_TDY_MAPK_plant Ca 98.0 1.2E-05 2.6E-10 83.3 6.8 65 648-714 2-68 (338)
142 cd05090 PTKc_Ror1 Catalytic do 98.0 1.3E-05 2.9E-10 80.6 6.9 69 646-714 5-76 (283)
143 cd05629 STKc_NDR_like_fungal C 98.0 1.3E-05 2.8E-10 84.4 7.0 66 647-714 2-70 (377)
144 cd06615 PKc_MEK Catalytic doma 98.0 1.6E-05 3.5E-10 81.1 7.5 66 647-714 2-68 (308)
145 cd05050 PTKc_Musk Catalytic do 98.0 1.3E-05 2.8E-10 81.0 6.7 71 645-715 4-78 (288)
146 cd08228 STKc_Nek6 Catalytic do 98.0 1.6E-05 3.5E-10 79.2 7.2 67 646-714 2-71 (267)
147 cd05625 STKc_LATS1 Catalytic d 98.0 1.1E-05 2.5E-10 85.0 6.4 66 647-714 2-70 (382)
148 cd05631 STKc_GRK4 Catalytic do 98.0 1.4E-05 3.1E-10 80.5 6.8 65 648-714 2-69 (285)
149 cd05088 PTKc_Tie2 Catalytic do 98.0 1.6E-05 3.4E-10 81.0 7.2 69 646-714 7-77 (303)
150 KOG1644 U2-associated snRNP A' 98.0 1.8E-05 3.9E-10 70.6 6.3 105 66-174 21-127 (233)
151 cd05038 PTKc_Jak_rpt2 Catalyti 97.9 1.9E-05 4E-10 79.6 7.5 68 647-714 5-75 (284)
152 KOG0198 MEKK and related serin 97.9 1.3E-05 2.8E-10 79.4 6.0 65 647-713 18-82 (313)
153 cd05113 PTKc_Btk_Bmx Catalytic 97.9 1.6E-05 3.5E-10 78.7 6.8 64 647-714 5-68 (256)
154 PTZ00036 glycogen synthase kin 97.9 1.4E-05 3E-10 85.7 6.7 65 644-714 64-128 (440)
155 cd07873 STKc_PCTAIRE1 Catalyti 97.9 2.2E-05 4.7E-10 79.9 7.9 67 646-714 6-73 (301)
156 cd05039 PTKc_Csk_like Catalyti 97.9 1.5E-05 3.3E-10 78.9 6.5 65 645-714 5-69 (256)
157 KOG4236 Serine/threonine prote 97.9 1.5E-05 3.3E-10 80.8 6.3 60 651-712 569-630 (888)
158 cd05067 PTKc_Lck_Blk Catalytic 97.9 1.7E-05 3.7E-10 78.7 6.8 66 645-714 5-70 (260)
159 cd07864 STKc_CDK12 Catalytic d 97.9 2E-05 4.2E-10 80.3 7.3 70 643-714 4-75 (302)
160 cd05093 PTKc_TrkB Catalytic do 97.9 1.8E-05 3.8E-10 80.0 6.8 69 646-714 5-76 (288)
161 cd07879 STKc_p38delta_MAPK13 C 97.9 1.9E-05 4.1E-10 81.9 7.1 67 646-714 15-83 (342)
162 cd05061 PTKc_InsR Catalytic do 97.9 1.5E-05 3.3E-10 80.5 6.2 73 642-714 2-78 (288)
163 PRK09188 serine/threonine prot 97.9 1.7E-05 3.7E-10 81.1 6.5 67 642-709 14-85 (365)
164 cd06639 STKc_myosinIIIB Cataly 97.9 1.8E-05 3.8E-10 80.1 6.7 76 636-714 12-88 (291)
165 cd05034 PTKc_Src_like Catalyti 97.9 2E-05 4.2E-10 78.3 6.9 68 643-714 3-70 (261)
166 cd05110 PTKc_HER4 Catalytic do 97.9 2.2E-05 4.9E-10 79.9 7.4 70 645-714 6-78 (303)
167 cd05596 STKc_ROCK Catalytic do 97.9 1.5E-05 3.2E-10 83.6 6.2 71 642-714 39-112 (370)
168 cd05605 STKc_GRK4_like Catalyt 97.9 1.8E-05 4E-10 79.7 6.7 66 647-714 1-69 (285)
169 cd05060 PTKc_Syk_like Catalyti 97.9 2.4E-05 5.2E-10 77.5 7.2 63 652-714 1-65 (257)
170 cd06656 STKc_PAK3 Catalytic do 97.9 3E-05 6.5E-10 78.7 8.0 67 646-714 19-85 (297)
171 cd05097 PTKc_DDR_like Catalyti 97.9 2E-05 4.4E-10 79.8 6.8 69 646-714 5-86 (295)
172 cd05056 PTKc_FAK Catalytic dom 97.9 1.7E-05 3.6E-10 79.3 6.1 69 646-714 6-76 (270)
173 cd05040 PTKc_Ack_like Catalyti 97.9 2.3E-05 4.9E-10 77.7 6.9 63 652-714 1-65 (257)
174 KOG4721 Serine/threonine prote 97.9 4.6E-06 9.9E-11 85.4 1.9 56 649-715 127-182 (904)
175 PRK13184 pknD serine/threonine 97.9 2.1E-05 4.6E-10 88.8 7.3 67 646-714 2-71 (932)
176 cd05077 PTK_Jak1_rpt1 Pseudoki 97.9 2.1E-05 4.6E-10 78.1 6.6 62 653-714 2-73 (262)
177 cd05072 PTKc_Lyn Catalytic dom 97.9 2E-05 4.3E-10 78.3 6.4 66 645-714 5-70 (261)
178 cd05621 STKc_ROCK2 Catalytic d 97.9 2E-05 4.3E-10 82.5 6.7 73 640-714 37-112 (370)
179 cd05598 STKc_LATS Catalytic do 97.9 2.1E-05 4.6E-10 82.8 7.0 67 646-714 1-70 (376)
180 cd06621 PKc_MAPKK_Pek1_like Ca 97.9 2.7E-05 5.9E-10 78.6 7.5 66 647-714 2-68 (287)
181 cd05084 PTKc_Fes Catalytic dom 97.9 2.8E-05 6E-10 76.8 7.4 61 652-714 1-62 (252)
182 cd05063 PTKc_EphR_A2 Catalytic 97.9 2.4E-05 5.2E-10 78.0 7.0 69 646-714 5-75 (268)
183 cd05091 PTKc_Ror2 Catalytic do 97.9 2.1E-05 4.6E-10 79.2 6.6 68 647-714 6-77 (283)
184 cd06632 STKc_MEKK1_plant Catal 97.9 2.9E-05 6.3E-10 76.9 7.4 65 648-714 2-71 (258)
185 cd06607 STKc_TAO Catalytic dom 97.9 2.6E-05 5.5E-10 79.6 7.2 67 646-714 15-84 (307)
186 cd07870 STKc_PFTAIRE2 Catalyti 97.9 2.3E-05 5.1E-10 79.2 6.8 69 644-714 3-72 (291)
187 cd05111 PTK_HER3 Pseudokinase 97.9 3E-05 6.6E-10 77.8 7.6 69 646-714 7-78 (279)
188 KOG0605 NDR and related serine 97.9 1.9E-05 4.2E-10 80.7 6.0 70 642-713 137-209 (550)
189 cd05043 PTK_Ryk Pseudokinase d 97.9 2.3E-05 4.9E-10 78.8 6.7 70 645-714 5-77 (280)
190 cd07862 STKc_CDK6 Catalytic do 97.9 3.7E-05 8.1E-10 77.7 8.3 67 647-714 2-73 (290)
191 cd05036 PTKc_ALK_LTK Catalytic 97.9 1.9E-05 4.2E-10 79.2 6.1 70 645-714 5-78 (277)
192 cd05089 PTKc_Tie1 Catalytic do 97.9 2.3E-05 5.1E-10 79.5 6.7 69 646-714 2-72 (297)
193 cd05109 PTKc_HER2 Catalytic do 97.9 2.8E-05 6E-10 78.1 7.2 70 645-714 6-78 (279)
194 cd05054 PTKc_VEGFR Catalytic d 97.9 1.1E-05 2.5E-10 83.2 4.5 71 644-714 5-80 (337)
195 cd07877 STKc_p38alpha_MAPK14 C 97.9 2.5E-05 5.4E-10 81.1 7.0 74 639-714 10-85 (345)
196 cd06645 STKc_MAP4K3 Catalytic 97.9 2.2E-05 4.8E-10 78.3 6.4 67 646-714 9-75 (267)
197 cd05622 STKc_ROCK1 Catalytic d 97.9 2.4E-05 5.1E-10 82.0 6.8 75 638-714 35-112 (371)
198 cd05086 PTKc_Aatyk2 Catalytic 97.9 2.9E-05 6.3E-10 77.4 7.2 62 653-714 2-64 (268)
199 cd05066 PTKc_EphR_A Catalytic 97.9 2.9E-05 6.3E-10 77.4 7.2 69 646-714 4-74 (267)
200 cd06652 STKc_MEKK2 Catalytic d 97.9 3E-05 6.6E-10 77.2 7.3 67 646-714 2-73 (265)
201 KOG0574 STE20-like serine/thre 97.9 2.1E-06 4.6E-11 80.6 -1.0 63 648-714 35-97 (502)
202 cd05057 PTKc_EGFR_like Catalyt 97.9 2.7E-05 5.9E-10 78.2 6.9 69 646-714 7-78 (279)
203 cd06644 STKc_STK10_LOK Catalyt 97.9 2.3E-05 5.1E-10 79.3 6.5 67 646-714 12-78 (292)
204 cd05046 PTK_CCK4 Pseudokinase 97.9 2.5E-05 5.4E-10 78.2 6.6 69 646-714 5-77 (275)
205 cd05065 PTKc_EphR_B Catalytic 97.9 2.6E-05 5.6E-10 77.9 6.6 68 647-714 5-74 (269)
206 cd07876 STKc_JNK2 Catalytic do 97.9 2.6E-05 5.7E-10 81.5 6.9 69 644-714 19-89 (359)
207 cd05585 STKc_YPK1_like Catalyt 97.9 2.7E-05 5.8E-10 79.6 6.9 59 654-714 1-62 (312)
208 cd05092 PTKc_TrkA Catalytic do 97.9 3.1E-05 6.7E-10 77.8 7.2 68 647-714 6-76 (280)
209 cd06641 STKc_MST3 Catalytic do 97.9 3.1E-05 6.8E-10 77.6 7.2 65 648-714 6-71 (277)
210 cd06643 STKc_SLK Catalytic dom 97.9 2.5E-05 5.4E-10 78.6 6.4 65 648-714 7-71 (282)
211 cd07860 STKc_CDK2_3 Catalytic 97.9 2.3E-05 5E-10 78.9 6.2 66 647-714 1-68 (284)
212 cd05051 PTKc_DDR Catalytic dom 97.9 3.5E-05 7.7E-10 78.1 7.6 70 645-714 4-88 (296)
213 cd07842 STKc_CDK8_like Catalyt 97.8 3.4E-05 7.5E-10 79.0 7.5 67 648-714 2-71 (316)
214 cd05071 PTKc_Src Catalytic dom 97.8 2.7E-05 5.9E-10 77.4 6.5 66 645-714 5-70 (262)
215 cd05058 PTKc_Met_Ron Catalytic 97.8 3.6E-05 7.9E-10 76.4 7.4 63 652-714 1-65 (262)
216 cd07861 STKc_CDK1_euk Catalyti 97.8 3.9E-05 8.6E-10 77.3 7.7 66 647-714 1-68 (285)
217 cd06651 STKc_MEKK3 Catalytic d 97.8 4E-05 8.6E-10 76.4 7.6 67 646-714 2-73 (266)
218 cd06613 STKc_MAP4K3_like Catal 97.8 4.2E-05 9.1E-10 76.0 7.7 67 646-714 3-69 (262)
219 cd05571 STKc_PKB Catalytic dom 97.8 3.3E-05 7.1E-10 79.4 7.1 61 652-714 1-64 (323)
220 cd08529 STKc_FA2-like Catalyti 97.8 3.3E-05 7.2E-10 76.4 6.9 66 647-714 1-68 (256)
221 cd05595 STKc_PKB_beta Catalyti 97.8 3.2E-05 7E-10 79.4 7.0 61 652-714 1-64 (323)
222 cd05628 STKc_NDR1 Catalytic do 97.8 2.9E-05 6.4E-10 81.2 6.8 67 646-714 1-70 (363)
223 cd07843 STKc_CDC2L1 Catalytic 97.8 3.6E-05 7.7E-10 78.0 7.2 67 646-714 5-73 (293)
224 cd07846 STKc_CDKL2_3 Catalytic 97.8 1.7E-05 3.7E-10 80.0 4.8 66 647-714 2-69 (286)
225 PHA03212 serine/threonine kina 97.8 3.2E-05 6.9E-10 81.5 7.0 62 645-714 91-152 (391)
226 cd06654 STKc_PAK1 Catalytic do 97.8 4.8E-05 1E-09 77.1 8.1 67 646-714 20-86 (296)
227 cd05055 PTKc_PDGFR Catalytic d 97.8 2.7E-05 5.9E-10 79.1 6.3 71 644-714 33-108 (302)
228 cd07878 STKc_p38beta_MAPK11 Ca 97.8 2E-05 4.4E-10 81.8 5.4 69 644-714 13-83 (343)
229 cd05073 PTKc_Hck Catalytic dom 97.8 2.9E-05 6.2E-10 77.1 6.2 66 645-714 5-70 (260)
230 cd08224 STKc_Nek6_Nek7 Catalyt 97.8 4.1E-05 8.9E-10 76.3 7.4 67 646-714 2-71 (267)
231 cd06612 STKc_MST1_2 Catalytic 97.8 3.5E-05 7.7E-10 76.2 6.8 65 646-714 3-67 (256)
232 cd05048 PTKc_Ror Catalytic Dom 97.8 3.5E-05 7.5E-10 77.6 6.8 69 646-714 5-77 (283)
233 cd06653 STKc_MEKK3_like_1 Cata 97.8 4.6E-05 9.9E-10 75.8 7.6 67 646-714 2-73 (264)
234 cd07856 STKc_Sty1_Hog1 Catalyt 97.8 3.4E-05 7.3E-10 79.5 6.8 72 641-714 5-78 (328)
235 PF12799 LRR_4: Leucine Rich r 97.8 1.9E-05 4.2E-10 52.9 3.2 36 41-77 2-37 (44)
236 cd06609 STKc_MST3_like Catalyt 97.8 4.4E-05 9.4E-10 76.5 7.4 66 647-714 2-68 (274)
237 PF12799 LRR_4: Leucine Rich r 97.8 1.8E-05 3.8E-10 53.1 3.0 36 89-125 2-37 (44)
238 cd05045 PTKc_RET Catalytic dom 97.8 4.3E-05 9.4E-10 77.2 7.4 68 647-714 1-72 (290)
239 smart00219 TyrKc Tyrosine kina 97.8 4.8E-05 1E-09 75.3 7.6 66 649-714 2-70 (258)
240 KOG0611 Predicted serine/threo 97.8 7.5E-06 1.6E-10 80.3 1.7 67 645-713 52-121 (668)
241 cd06625 STKc_MEKK3_like Cataly 97.8 5.8E-05 1.3E-09 75.0 8.2 67 646-714 2-73 (263)
242 cd07836 STKc_Pho85 Catalytic d 97.8 4.5E-05 9.7E-10 76.8 7.4 66 647-714 1-67 (284)
243 cd05597 STKc_DMPK_like Catalyt 97.8 3.9E-05 8.4E-10 79.1 7.1 66 647-714 2-70 (331)
244 cd07832 STKc_CCRK Catalytic do 97.8 5.1E-05 1.1E-09 76.5 7.9 65 648-714 2-68 (286)
245 cd06620 PKc_MAPKK_Byr1_like Ca 97.8 3.6E-05 7.8E-10 77.5 6.7 67 646-714 5-72 (284)
246 cd05085 PTKc_Fer Catalytic dom 97.8 4.9E-05 1.1E-09 74.9 7.5 60 652-714 1-61 (250)
247 cd05632 STKc_GRK5 Catalytic do 97.8 4.3E-05 9.2E-10 77.0 7.2 65 648-714 2-69 (285)
248 cd05070 PTKc_Fyn_Yrk Catalytic 97.8 3.9E-05 8.4E-10 76.2 6.7 65 646-714 6-70 (260)
249 cd05079 PTKc_Jak1_rpt2 Catalyt 97.8 4.2E-05 9E-10 77.1 6.9 68 647-714 5-75 (284)
250 cd07854 STKc_MAPK4_6 Catalytic 97.8 2.8E-05 6.1E-10 80.6 5.9 66 646-713 5-70 (342)
251 cd05047 PTKc_Tie Catalytic dom 97.8 5.1E-05 1.1E-09 75.8 7.5 63 652-714 1-65 (270)
252 cd07840 STKc_CDK9_like Catalyt 97.8 4.7E-05 1E-09 76.7 7.3 65 648-714 1-67 (287)
253 cd05095 PTKc_DDR2 Catalytic do 97.8 4.1E-05 8.9E-10 77.7 6.8 69 646-714 5-88 (296)
254 cd06629 STKc_MAPKKK_Bck1_like 97.8 4.1E-05 8.9E-10 76.6 6.7 65 648-714 3-77 (272)
255 cd05059 PTKc_Tec_like Catalyti 97.8 5.1E-05 1.1E-09 75.1 7.3 64 647-714 5-68 (256)
256 cd07844 STKc_PCTAIRE_like Cata 97.8 4.8E-05 1E-09 76.9 7.2 67 646-714 5-72 (291)
257 cd06647 STKc_PAK_I Catalytic d 97.8 3.8E-05 8.3E-10 77.7 6.5 67 646-714 19-85 (293)
258 cd05080 PTKc_Tyk2_rpt2 Catalyt 97.8 5.5E-05 1.2E-09 76.1 7.6 67 648-714 6-75 (283)
259 KOG3665 ZYG-1-like serine/thre 97.8 5.5E-06 1.2E-10 91.6 0.3 105 64-170 122-230 (699)
260 cd06630 STKc_MEKK1 Catalytic d 97.8 3.7E-05 8E-10 76.7 6.3 66 647-714 1-72 (268)
261 KOG0586 Serine/threonine prote 97.8 3.7E-05 8E-10 80.0 6.2 70 643-714 53-124 (596)
262 PHA03211 serine/threonine kina 97.8 3.7E-05 8.1E-10 82.2 6.5 62 645-714 168-229 (461)
263 PLN00009 cyclin-dependent kina 97.8 4.8E-05 1E-09 77.1 7.1 67 646-714 2-70 (294)
264 KOG1989 ARK protein kinase fam 97.8 2.7E-05 5.9E-10 84.6 5.4 66 645-712 36-102 (738)
265 cd06635 STKc_TAO1 Catalytic do 97.8 4.8E-05 1E-09 78.0 7.2 65 648-714 27-94 (317)
266 cd07847 STKc_CDKL1_4 Catalytic 97.8 5.8E-05 1.3E-09 76.1 7.6 66 647-714 2-69 (286)
267 cd07841 STKc_CDK7 Catalytic do 97.8 4.4E-05 9.6E-10 77.5 6.7 65 648-714 2-71 (298)
268 cd08229 STKc_Nek7 Catalytic do 97.8 2.9E-05 6.4E-10 77.4 5.3 67 646-714 2-71 (267)
269 cd07880 STKc_p38gamma_MAPK12 C 97.8 5E-05 1.1E-09 78.8 7.2 69 644-714 13-83 (343)
270 cd05580 STKc_PKA Catalytic dom 97.8 4.7E-05 1E-09 76.9 6.7 66 647-714 2-70 (290)
271 cd07874 STKc_JNK3 Catalytic do 97.8 4.5E-05 9.8E-10 79.6 6.8 69 644-714 15-85 (355)
272 cd07865 STKc_CDK9 Catalytic do 97.8 5.8E-05 1.3E-09 77.1 7.4 68 645-714 11-80 (310)
273 cd07849 STKc_ERK1_2_like Catal 97.8 3.6E-05 7.8E-10 79.6 5.9 68 645-714 4-72 (336)
274 KOG0200 Fibroblast/platelet-de 97.8 2.7E-05 5.8E-10 86.5 5.2 76 640-715 290-372 (609)
275 cd06628 STKc_MAPKKK_Byr2_like 97.8 7.6E-05 1.7E-09 74.3 8.0 65 648-714 2-75 (267)
276 cd05094 PTKc_TrkC Catalytic do 97.8 4.7E-05 1E-09 77.0 6.6 69 646-714 5-76 (291)
277 cd05053 PTKc_FGFR Catalytic do 97.8 3.6E-05 7.8E-10 77.9 5.7 73 642-714 8-85 (293)
278 cd07845 STKc_CDK10 Catalytic d 97.7 6E-05 1.3E-09 77.0 7.3 68 645-714 6-75 (309)
279 cd06655 STKc_PAK2 Catalytic do 97.7 6.3E-05 1.4E-09 76.3 7.4 67 646-714 19-85 (296)
280 cd05593 STKc_PKB_gamma Catalyt 97.7 6E-05 1.3E-09 77.6 7.3 61 652-714 1-64 (328)
281 cd06608 STKc_myosinIII_like Ca 97.7 5.7E-05 1.2E-09 75.6 7.0 69 643-714 3-72 (275)
282 cd05573 STKc_ROCK_NDR_like Cat 97.7 3.4E-05 7.5E-10 80.4 5.6 66 647-714 2-70 (350)
283 PHA03207 serine/threonine kina 97.7 4.8E-05 1E-09 80.5 6.7 65 645-714 91-155 (392)
284 cd05032 PTKc_InsR_like Catalyt 97.7 4.4E-05 9.6E-10 76.5 6.2 70 645-714 5-78 (277)
285 cd06622 PKc_MAPKK_PBS2_like Ca 97.7 2.9E-05 6.2E-10 78.4 4.8 66 647-714 2-68 (286)
286 cd06626 STKc_MEKK4 Catalytic d 97.7 7.2E-05 1.6E-09 74.3 7.6 65 648-714 2-68 (264)
287 cd05630 STKc_GRK6 Catalytic do 97.7 6.8E-05 1.5E-09 75.5 7.5 65 648-714 2-69 (285)
288 cd05037 PTK_Jak_rpt1 Pseudokin 97.7 4.7E-05 1E-09 75.4 6.2 62 652-714 1-70 (259)
289 cd05112 PTKc_Itk Catalytic dom 97.7 6.8E-05 1.5E-09 74.2 7.3 65 646-714 4-68 (256)
290 cd07852 STKc_MAPK15 Catalytic 97.7 4.1E-05 8.9E-10 79.3 6.0 68 645-714 6-76 (337)
291 cd06617 PKc_MKK3_6 Catalytic d 97.7 7.9E-05 1.7E-09 75.0 7.9 67 646-714 1-69 (283)
292 cd05584 STKc_p70S6K Catalytic 97.7 5.7E-05 1.2E-09 77.6 6.9 63 652-714 2-69 (323)
293 cd06631 STKc_YSK4 Catalytic do 97.7 8.2E-05 1.8E-09 74.0 7.8 64 648-714 2-71 (265)
294 KOG0583 Serine/threonine prote 97.7 5.8E-05 1.3E-09 77.9 6.8 70 643-714 14-89 (370)
295 KOG0582 Ste20-like serine/thre 97.7 5.6E-05 1.2E-09 75.6 6.2 69 643-713 23-92 (516)
296 cd06623 PKc_MAPKK_plant_like C 97.7 8.1E-05 1.7E-09 74.0 7.7 66 647-714 2-68 (264)
297 cd07835 STKc_CDK1_like Catalyt 97.7 5.8E-05 1.3E-09 76.0 6.7 65 648-714 1-67 (283)
298 cd05627 STKc_NDR2 Catalytic do 97.7 6E-05 1.3E-09 78.8 6.9 66 647-714 2-70 (360)
299 cd06610 STKc_OSR1_SPAK Catalyt 97.7 9.1E-05 2E-09 73.7 7.9 66 647-714 2-68 (267)
300 cd06636 STKc_MAP4K4_6 Catalyti 97.7 6.2E-05 1.3E-09 75.7 6.7 75 637-714 7-82 (282)
301 cd05624 STKc_MRCK_beta Catalyt 97.7 6.5E-05 1.4E-09 77.5 7.0 67 646-714 1-70 (331)
302 KOG0660 Mitogen-activated prot 97.7 4.6E-05 1E-09 74.3 5.2 67 645-713 21-89 (359)
303 cd05601 STKc_CRIK Catalytic do 97.7 5.6E-05 1.2E-09 78.0 6.4 66 647-714 2-70 (330)
304 cd07875 STKc_JNK1 Catalytic do 97.7 6.4E-05 1.4E-09 78.7 6.9 69 644-714 22-92 (364)
305 cd06640 STKc_MST4 Catalytic do 97.7 6.8E-05 1.5E-09 75.2 6.8 66 647-714 5-71 (277)
306 KOG0661 MAPK related serine/th 97.7 8.6E-06 1.9E-10 81.8 0.3 64 647-713 11-77 (538)
307 PTZ00266 NIMA-related protein 97.7 5.3E-05 1.2E-09 86.1 6.5 72 641-714 8-81 (1021)
308 cd07863 STKc_CDK4 Catalytic do 97.7 7.7E-05 1.7E-09 75.3 7.0 65 648-714 2-71 (288)
309 cd06642 STKc_STK25-YSK1 Cataly 97.7 3.5E-05 7.6E-10 77.3 4.5 65 648-714 6-71 (277)
310 cd05069 PTKc_Yes Catalytic dom 97.7 7E-05 1.5E-09 74.3 6.6 65 646-714 6-70 (260)
311 cd06614 STKc_PAK Catalytic dom 97.7 8.9E-05 1.9E-09 74.7 7.4 69 643-714 16-84 (286)
312 cd05589 STKc_PKN Catalytic dom 97.7 7.1E-05 1.5E-09 77.0 6.8 65 648-714 1-71 (324)
313 cd08217 STKc_Nek2 Catalytic do 97.7 8.8E-05 1.9E-09 73.7 7.3 66 647-714 1-68 (265)
314 cd06616 PKc_MKK4 Catalytic dom 97.7 6.2E-05 1.4E-09 76.0 6.3 66 647-714 5-72 (288)
315 cd05588 STKc_aPKC Catalytic do 97.7 8.2E-05 1.8E-09 76.7 7.2 61 652-714 1-65 (329)
316 PHA03209 serine/threonine kina 97.7 6.7E-05 1.5E-09 78.3 6.5 64 643-714 63-126 (357)
317 cd08219 STKc_Nek3 Catalytic do 97.7 0.00011 2.4E-09 72.6 7.6 66 647-714 1-67 (255)
318 cd07833 STKc_CDKL Catalytic do 97.7 5.3E-05 1.2E-09 76.4 5.4 66 647-714 2-69 (288)
319 cd05623 STKc_MRCK_alpha Cataly 97.7 8.3E-05 1.8E-09 76.8 6.9 66 647-714 2-70 (332)
320 cd05609 STKc_MAST Catalytic do 97.7 9.3E-05 2E-09 75.4 7.2 66 647-714 2-70 (305)
321 cd06917 STKc_NAK1_like Catalyt 97.7 9.8E-05 2.1E-09 74.0 7.2 66 647-714 2-71 (277)
322 cd05078 PTK_Jak2_Jak3_rpt1 Pse 97.7 2.3E-05 4.9E-10 77.7 2.6 63 652-714 1-68 (258)
323 cd08225 STKc_Nek5 Catalytic do 97.7 6.9E-05 1.5E-09 74.2 6.0 66 647-714 1-68 (257)
324 cd06605 PKc_MAPKK Catalytic do 97.7 6.5E-05 1.4E-09 74.7 5.9 66 647-714 2-68 (265)
325 cd05578 STKc_Yank1 Catalytic d 97.7 4.5E-05 9.8E-10 75.5 4.7 66 647-714 1-69 (258)
326 cd05618 STKc_aPKC_iota Catalyt 97.7 9.5E-05 2.1E-09 76.2 7.2 61 652-714 1-65 (329)
327 cd05083 PTKc_Chk Catalytic dom 97.6 6.2E-05 1.3E-09 74.4 5.5 63 646-714 6-68 (254)
328 PRK10345 hypothetical protein; 97.6 0.00011 2.5E-09 69.1 6.9 62 648-714 4-70 (210)
329 cd06627 STKc_Cdc7_like Catalyt 97.6 0.00014 2.9E-09 71.8 7.8 65 648-714 2-68 (254)
330 cd07837 STKc_CdkB_plant Cataly 97.6 0.0001 2.2E-09 74.7 7.1 66 647-714 2-70 (295)
331 cd05101 PTKc_FGFR2 Catalytic d 97.6 6.3E-05 1.4E-09 76.6 5.6 72 643-714 12-90 (304)
332 cd06606 STKc_MAPKKK Catalytic 97.6 0.00013 2.8E-09 72.2 7.6 66 647-714 1-68 (260)
333 cd07866 STKc_BUR1 Catalytic do 97.6 6.7E-05 1.5E-09 76.7 5.7 68 645-714 7-76 (311)
334 cd05122 PKc_STE Catalytic doma 97.6 0.00014 3.1E-09 71.5 7.9 66 647-714 1-66 (253)
335 cd05574 STKc_phototropin_like 97.6 0.00011 2.4E-09 75.3 7.3 66 647-714 2-70 (316)
336 cd06633 STKc_TAO3 Catalytic do 97.6 0.00012 2.7E-09 74.8 7.6 65 648-714 23-90 (313)
337 cd05570 STKc_PKC Catalytic dom 97.6 0.0001 2.2E-09 75.6 7.0 61 652-714 1-65 (318)
338 cd08227 PK_STRAD_alpha Pseudok 97.6 8.9E-05 1.9E-09 76.4 6.6 62 651-714 3-68 (327)
339 cd07850 STKc_JNK Catalytic dom 97.6 0.0001 2.3E-09 76.8 7.1 68 645-714 15-84 (353)
340 cd05608 STKc_GRK1 Catalytic do 97.6 0.0001 2.2E-09 74.1 6.8 59 654-714 1-62 (280)
341 cd06659 STKc_PAK6 Catalytic do 97.6 6.8E-05 1.5E-09 76.0 5.6 62 651-714 26-87 (297)
342 cd05044 PTKc_c-ros Catalytic d 97.6 5E-05 1.1E-09 75.8 4.5 63 652-714 1-68 (269)
343 cd08218 STKc_Nek1 Catalytic do 97.6 0.00012 2.7E-09 72.3 7.2 66 647-714 1-68 (256)
344 cd05082 PTKc_Csk Catalytic dom 97.6 0.00012 2.6E-09 72.4 7.1 63 646-714 6-68 (256)
345 PTZ00267 NIMA-related protein 97.6 8.6E-05 1.9E-09 80.6 6.5 67 647-714 68-134 (478)
346 cd05041 PTKc_Fes_like Catalyti 97.6 0.00013 2.7E-09 72.0 7.2 60 652-714 1-61 (251)
347 cd05594 STKc_PKB_alpha Catalyt 97.6 0.00012 2.5E-09 75.4 7.2 61 652-714 1-64 (325)
348 cd05582 STKc_RSK_N N-terminal 97.6 9.9E-05 2.1E-09 75.7 6.6 63 652-714 2-67 (318)
349 KOG0579 Ste20-like serine/thre 97.6 5.5E-06 1.2E-10 85.7 -2.6 61 652-714 38-98 (1187)
350 cd05607 STKc_GRK7 Catalytic do 97.6 0.00014 2.9E-09 73.0 7.4 59 654-714 1-62 (277)
351 cd08221 STKc_Nek9 Catalytic do 97.6 0.00015 3.3E-09 71.6 7.6 65 648-714 2-68 (256)
352 PTZ00024 cyclin-dependent prot 97.6 0.00013 2.8E-09 75.5 7.3 63 650-714 13-89 (335)
353 cd05591 STKc_nPKC_epsilon Cata 97.6 0.00013 2.8E-09 74.9 7.2 61 652-714 1-65 (321)
354 cd06657 STKc_PAK4 Catalytic do 97.6 0.00012 2.7E-09 73.9 6.9 61 652-714 26-86 (292)
355 cd08220 STKc_Nek8 Catalytic do 97.6 0.00014 3.1E-09 71.8 7.2 66 647-714 1-68 (256)
356 cd05099 PTKc_FGFR4 Catalytic d 97.6 9.4E-05 2E-09 75.7 6.1 71 644-714 10-87 (314)
357 cd05100 PTKc_FGFR3 Catalytic d 97.6 8.9E-05 1.9E-09 76.6 5.9 74 642-715 8-88 (334)
358 cd05098 PTKc_FGFR1 Catalytic d 97.6 8.4E-05 1.8E-09 75.8 5.6 70 645-714 17-93 (307)
359 cd05619 STKc_nPKC_theta Cataly 97.6 0.00015 3.1E-09 74.3 7.3 61 652-714 1-65 (316)
360 cd07855 STKc_ERK5 Catalytic do 97.6 8.2E-05 1.8E-09 76.9 5.4 66 646-713 5-72 (334)
361 cd00192 PTKc Catalytic domain 97.6 0.00015 3.3E-09 71.8 7.2 63 652-714 1-65 (262)
362 PF00069 Pkinase: Protein kina 97.6 7.3E-05 1.6E-09 74.1 4.8 64 649-714 2-67 (260)
363 cd07858 STKc_TEY_MAPK_plant Ca 97.6 8.7E-05 1.9E-09 76.8 5.5 67 646-714 5-73 (337)
364 cd06634 STKc_TAO2 Catalytic do 97.6 0.00012 2.6E-09 74.7 6.2 66 647-714 16-84 (308)
365 KOG4279 Serine/threonine prote 97.6 3.9E-05 8.5E-10 80.6 2.5 61 653-715 582-642 (1226)
366 PTZ00283 serine/threonine prot 97.5 9.9E-05 2.2E-09 80.2 5.8 70 642-713 28-99 (496)
367 KOG0666 Cyclin C-dependent kin 97.5 2.9E-05 6.3E-10 73.8 1.4 67 645-711 23-93 (438)
368 KOG2345 Serine/threonine prote 97.5 2.5E-05 5.5E-10 71.9 0.8 67 646-714 21-87 (302)
369 cd07839 STKc_CDK5 Catalytic do 97.5 9.2E-05 2E-09 74.6 4.8 65 648-714 2-68 (284)
370 KOG4341 F-box protein containi 97.5 2.7E-06 5.8E-11 84.0 -6.1 278 136-419 138-437 (483)
371 cd06648 STKc_PAK_II Catalytic 97.5 0.00023 5E-09 71.7 7.5 65 648-714 21-85 (285)
372 cd05592 STKc_nPKC_theta_delta 97.5 0.0002 4.3E-09 73.3 7.2 61 652-714 1-65 (316)
373 KOG0694 Serine/threonine prote 97.5 0.00016 3.4E-09 76.5 6.2 69 643-713 365-437 (694)
374 PRK15386 type III secretion pr 97.5 0.00033 7.1E-09 71.4 8.3 57 332-394 48-104 (426)
375 cd08528 STKc_Nek10 Catalytic d 97.5 0.00025 5.3E-09 70.8 7.4 67 647-714 1-78 (269)
376 PLN03224 probable serine/threo 97.5 9.3E-05 2E-09 79.3 4.4 72 643-714 142-246 (507)
377 PRK15386 type III secretion pr 97.5 0.00028 6.1E-09 71.9 7.6 52 313-370 53-104 (426)
378 cd05603 STKc_SGK2 Catalytic do 97.5 0.00022 4.7E-09 73.3 7.0 61 652-714 1-65 (321)
379 cd05590 STKc_nPKC_eta Catalyti 97.5 0.00021 4.6E-09 73.3 6.9 61 652-714 1-65 (320)
380 KOG0668 Casein kinase II, alph 97.5 3.7E-05 7.9E-10 69.8 1.0 64 645-713 37-101 (338)
381 cd05604 STKc_SGK3 Catalytic do 97.5 0.00025 5.3E-09 73.0 7.3 61 652-714 1-65 (325)
382 KOG0616 cAMP-dependent protein 97.5 0.00011 2.3E-09 69.7 4.0 68 645-714 43-113 (355)
383 cd07834 STKc_MAPK Catalytic do 97.5 0.00013 2.9E-09 75.2 5.3 65 648-714 2-68 (330)
384 cd05575 STKc_SGK Catalytic dom 97.5 0.00025 5.3E-09 72.9 7.2 61 652-714 1-65 (323)
385 cd05587 STKc_cPKC Catalytic do 97.5 0.00025 5.4E-09 72.9 7.1 66 647-714 1-70 (324)
386 cd08215 STKc_Nek Catalytic dom 97.5 0.00031 6.7E-09 69.4 7.6 66 647-714 1-68 (258)
387 cd07857 STKc_MPK1 Catalytic do 97.5 0.00024 5.3E-09 73.3 7.0 67 648-714 2-71 (332)
388 cd06658 STKc_PAK5 Catalytic do 97.5 0.00011 2.3E-09 74.4 4.2 61 652-714 28-88 (292)
389 cd05610 STKc_MASTL Catalytic d 97.5 0.00027 5.9E-09 79.8 7.9 68 645-714 3-73 (669)
390 cd07831 STKc_MOK Catalytic dom 97.4 0.00032 6.9E-09 70.5 7.4 64 649-714 2-67 (282)
391 cd05577 STKc_GRK Catalytic dom 97.4 0.00031 6.7E-09 70.4 7.3 59 654-714 1-62 (277)
392 cd06618 PKc_MKK7 Catalytic dom 97.4 0.00023 5E-09 72.2 6.3 68 645-714 14-83 (296)
393 smart00221 STYKc Protein kinas 97.4 0.0003 6.5E-09 67.8 6.9 65 648-714 1-66 (225)
394 KOG4717 Serine/threonine prote 97.4 8.9E-05 1.9E-09 75.2 3.1 66 646-713 18-85 (864)
395 cd08223 STKc_Nek4 Catalytic do 97.4 0.00033 7.1E-09 69.3 7.3 66 647-714 1-68 (257)
396 cd05616 STKc_cPKC_beta Catalyt 97.4 0.00033 7.3E-09 71.9 7.1 66 647-714 1-70 (323)
397 KOG1006 Mitogen-activated prot 97.4 4.8E-05 1E-09 70.7 0.6 61 652-714 70-132 (361)
398 PHA03210 serine/threonine kina 97.4 0.00011 2.4E-09 80.1 3.6 69 645-714 147-232 (501)
399 cd05617 STKc_aPKC_zeta Catalyt 97.4 0.00034 7.4E-09 72.0 7.0 61 652-714 1-65 (327)
400 cd07829 STKc_CDK_like Catalyti 97.4 0.00019 4.1E-09 72.2 5.0 65 648-714 1-67 (282)
401 PTZ00284 protein kinase; Provi 97.4 0.00019 4.2E-09 77.8 5.4 73 639-714 122-200 (467)
402 cd07838 STKc_CDK4_6_like Catal 97.4 0.0004 8.6E-09 70.0 7.2 65 648-714 1-70 (287)
403 cd05581 STKc_PDK1 Catalytic do 97.4 0.00016 3.5E-09 72.5 4.2 66 647-714 2-71 (280)
404 cd05572 STKc_cGK_PKG Catalytic 97.4 0.00046 9.9E-09 68.5 7.4 59 654-714 1-62 (262)
405 cd08530 STKc_CNK2-like Catalyt 97.4 0.00024 5.3E-09 70.1 5.4 66 647-714 1-68 (256)
406 KOG0033 Ca2+/calmodulin-depend 97.3 7E-06 1.5E-10 75.1 -5.1 65 646-712 11-77 (355)
407 KOG3665 ZYG-1-like serine/thre 97.3 5E-05 1.1E-09 84.2 0.3 134 183-319 147-282 (699)
408 cd05614 STKc_MSK2_N N-terminal 97.3 0.0004 8.7E-09 71.7 7.0 68 647-714 1-74 (332)
409 KOG0610 Putative serine/threon 97.3 0.00018 4E-09 71.4 3.9 66 646-713 77-145 (459)
410 cd08226 PK_STRAD_beta Pseudoki 97.3 0.00051 1.1E-08 70.8 7.6 61 652-714 4-68 (328)
411 cd05620 STKc_nPKC_delta Cataly 97.3 0.00043 9.3E-09 70.8 6.9 61 652-714 1-65 (316)
412 cd05602 STKc_SGK1 Catalytic do 97.3 0.00046 1E-08 71.0 7.1 61 652-714 1-65 (325)
413 cd05615 STKc_cPKC_alpha Cataly 97.3 0.00046 9.9E-09 70.9 6.7 66 647-714 1-70 (323)
414 cd05118 STKc_CMGC Catalytic do 97.3 0.00032 7E-09 70.5 5.5 64 649-714 2-67 (283)
415 cd07830 STKc_MAK_like Catalyti 97.3 0.00025 5.4E-09 71.3 4.4 65 648-714 1-67 (283)
416 cd07851 STKc_p38 Catalytic dom 97.3 0.00021 4.5E-09 74.2 3.8 67 645-713 14-82 (343)
417 cd05579 STKc_MAST_like Catalyt 97.2 0.00034 7.4E-09 69.4 4.9 59 654-714 1-62 (265)
418 cd08222 STKc_Nek11 Catalytic d 97.2 0.00027 5.8E-09 70.1 4.1 65 648-714 2-71 (260)
419 KOG0669 Cyclin T-dependent kin 97.2 7E-06 1.5E-10 75.4 -6.6 67 646-714 17-85 (376)
420 KOG0587 Traf2- and Nck-interac 97.2 0.00055 1.2E-08 74.4 6.1 75 637-714 10-85 (953)
421 KOG0667 Dual-specificity tyros 97.2 0.00043 9.3E-09 73.0 4.7 65 647-714 187-257 (586)
422 KOG0578 p21-activated serine/t 97.2 0.00029 6.2E-09 72.9 3.4 67 646-714 273-339 (550)
423 cd05613 STKc_MSK1_N N-terminal 97.1 0.00093 2E-08 67.5 7.1 67 648-714 2-74 (290)
424 KOG1152 Signal transduction se 97.1 0.00026 5.7E-09 73.1 2.8 69 643-713 558-637 (772)
425 KOG2739 Leucine-rich acidic nu 97.1 0.00016 3.6E-09 67.6 1.1 37 36-74 39-75 (260)
426 KOG0584 Serine/threonine prote 97.1 0.00018 3.9E-09 75.3 1.5 63 650-714 44-110 (632)
427 KOG0592 3-phosphoinositide-dep 97.1 0.00029 6.4E-09 72.4 2.6 69 642-712 69-141 (604)
428 KOG2739 Leucine-rich acidic nu 97.1 0.00019 4.2E-09 67.1 1.1 110 56-167 35-150 (260)
429 cd05123 STKc_AGC Catalytic dom 97.0 0.00071 1.5E-08 66.5 4.8 59 654-714 1-62 (250)
430 KOG1151 Tousled-like protein k 97.0 0.00016 3.5E-09 72.0 0.1 64 649-714 466-536 (775)
431 KOG4341 F-box protein containi 97.0 1.9E-05 4.2E-10 78.1 -6.4 280 40-324 138-438 (483)
432 KOG0589 Serine/threonine prote 97.0 0.00072 1.6E-08 69.3 4.2 65 646-712 4-70 (426)
433 cd05583 STKc_MSK_N N-terminal 96.9 0.0012 2.6E-08 66.6 5.5 66 648-713 2-73 (288)
434 KOG2123 Uncharacterized conser 96.9 3.7E-05 8.1E-10 71.9 -5.0 84 286-374 18-102 (388)
435 PHA02882 putative serine/threo 96.9 0.002 4.3E-08 65.2 7.0 69 646-714 12-92 (294)
436 cd00180 PKc Catalytic domain o 96.9 0.0027 5.8E-08 60.2 7.5 59 654-714 1-60 (215)
437 cd05586 STKc_Sck1_like Catalyt 96.9 0.0019 4.2E-08 66.5 6.8 59 654-714 1-65 (330)
438 KOG0576 Mitogen-activated prot 96.9 0.00013 2.8E-09 76.6 -2.0 68 645-714 14-81 (829)
439 KOG0607 MAP kinase-interacting 96.8 0.00054 1.2E-08 65.6 1.5 69 638-713 75-144 (463)
440 cd05611 STKc_Rim15_like Cataly 96.7 0.0038 8.2E-08 61.8 6.8 61 652-714 2-66 (260)
441 KOG2123 Uncharacterized conser 96.6 8.8E-05 1.9E-09 69.5 -4.9 100 39-142 18-123 (388)
442 KOG4645 MAPKKK (MAP kinase kin 96.5 0.0012 2.6E-08 75.0 2.3 65 647-713 1236-1302(1509)
443 KOG0588 Serine/threonine prote 96.4 0.0034 7.4E-08 66.4 4.6 68 645-714 11-81 (786)
444 cd05633 STKc_GRK3 Catalytic do 96.4 0.0088 1.9E-07 59.9 7.4 60 653-714 1-66 (279)
445 KOG1024 Receptor-like protein 96.4 0.0018 3.9E-08 64.0 2.1 75 641-715 279-357 (563)
446 cd08216 PK_STRAD Pseudokinase 96.3 0.0041 9E-08 63.5 4.6 59 652-714 8-68 (314)
447 KOG1027 Serine/threonine prote 96.3 0.0023 5E-08 69.5 2.7 59 648-713 511-571 (903)
448 PHA03390 pk1 serine/threonine- 96.2 0.014 3.1E-07 57.9 8.0 65 643-714 11-78 (267)
449 PRK09605 bifunctional UGMP fam 96.2 0.007 1.5E-07 66.7 6.2 69 642-714 329-405 (535)
450 cd05147 RIO1_euk RIO kinase fa 96.2 0.0047 1E-07 57.5 4.1 55 651-708 2-82 (190)
451 PRK10359 lipopolysaccharide co 96.2 0.0069 1.5E-07 57.5 5.2 65 645-713 30-103 (232)
452 KOG0986 G protein-coupled rece 96.1 0.002 4.3E-08 65.0 0.9 68 644-713 183-253 (591)
453 cd05606 STKc_beta_ARK Catalyti 96.1 0.014 3E-07 58.4 6.9 60 653-714 1-66 (278)
454 PRK14879 serine/threonine prot 96.1 0.01 2.3E-07 56.5 5.7 58 652-713 2-67 (211)
455 cd05145 RIO1_like RIO kinase f 96.0 0.016 3.6E-07 54.0 6.4 56 651-709 2-83 (190)
456 KOG1947 Leucine rich repeat pr 95.9 0.0006 1.3E-08 74.6 -4.1 239 36-299 184-439 (482)
457 KOG0599 Phosphorylase kinase g 95.8 0.0074 1.6E-07 56.8 3.3 68 645-714 16-92 (411)
458 KOG1947 Leucine rich repeat pr 95.6 0.00094 2E-08 73.0 -4.0 236 61-324 185-439 (482)
459 KOG0983 Mitogen-activated prot 95.6 0.019 4E-07 54.3 5.0 62 651-714 97-160 (391)
460 KOG0664 Nemo-like MAPK-related 95.6 0.0043 9.3E-08 58.1 0.8 63 647-711 54-118 (449)
461 cd05144 RIO2_C RIO kinase fami 95.5 0.028 6.1E-07 52.9 6.2 64 640-706 9-94 (198)
462 KOG0690 Serine/threonine prote 95.2 0.0079 1.7E-07 58.0 1.3 64 645-710 167-233 (516)
463 KOG1167 Serine/threonine prote 95.2 0.0097 2.1E-07 59.6 1.8 69 643-713 33-103 (418)
464 KOG0612 Rho-associated, coiled 94.8 0.0073 1.6E-07 68.0 -0.3 71 639-711 68-141 (1317)
465 cd05120 APH_ChoK_like Aminogly 94.8 0.06 1.3E-06 47.8 5.7 58 651-714 3-62 (155)
466 smart00090 RIO RIO-like kinase 94.4 0.088 1.9E-06 50.9 6.3 61 643-705 25-110 (237)
467 KOG0984 Mitogen-activated prot 94.4 0.033 7.1E-07 50.5 3.0 72 641-714 41-114 (282)
468 PF00560 LRR_1: Leucine Rich R 94.2 0.021 4.7E-07 31.6 0.9 12 114-125 2-13 (22)
469 KOG0596 Dual specificity; seri 94.1 0.03 6.5E-07 58.3 2.3 67 645-714 360-429 (677)
470 cd05119 RIO RIO kinase family, 94.0 0.061 1.3E-06 50.0 4.1 31 651-684 2-32 (187)
471 KOG0695 Serine/threonine prote 93.9 0.018 4E-07 55.6 0.3 69 643-713 247-319 (593)
472 KOG4308 LRR-containing protein 93.7 0.00055 1.2E-08 72.7 -11.3 143 384-543 144-304 (478)
473 PRK12274 serine/threonine prot 93.7 0.17 3.6E-06 47.3 6.2 61 649-713 5-70 (218)
474 PF00560 LRR_1: Leucine Rich R 93.7 0.033 7.1E-07 30.8 1.0 12 507-518 2-13 (22)
475 KOG4308 LRR-containing protein 93.5 0.00057 1.2E-08 72.5 -11.7 163 332-494 111-303 (478)
476 PLN03225 Serine/threonine-prot 93.3 0.073 1.6E-06 58.8 3.8 40 644-683 130-171 (566)
477 KOG0473 Leucine-rich repeat pr 92.9 0.002 4.4E-08 59.0 -7.3 84 61-147 39-122 (326)
478 TIGR03724 arch_bud32 Kae1-asso 92.8 0.17 3.8E-06 47.5 5.1 53 653-708 1-60 (199)
479 KOG0195 Integrin-linked kinase 92.7 0.016 3.5E-07 54.4 -2.0 60 652-715 196-257 (448)
480 KOG1164 Casein kinase (serine/ 92.5 0.23 4.9E-06 50.8 5.9 65 647-712 19-87 (322)
481 smart00369 LRR_TYP Leucine-ric 91.7 0.16 3.5E-06 29.4 2.2 21 40-60 2-22 (26)
482 smart00370 LRR Leucine-rich re 91.7 0.16 3.5E-06 29.4 2.2 21 40-60 2-22 (26)
483 KOG0473 Leucine-rich repeat pr 91.6 0.0072 1.6E-07 55.5 -5.4 88 452-542 37-124 (326)
484 KOG0608 Warts/lats-like serine 91.5 0.085 1.8E-06 55.9 1.4 67 645-713 628-697 (1034)
485 smart00370 LRR Leucine-rich re 91.4 0.15 3.2E-06 29.6 1.8 22 505-526 2-23 (26)
486 smart00369 LRR_TYP Leucine-ric 91.4 0.15 3.2E-06 29.6 1.8 22 505-526 2-23 (26)
487 TIGR01982 UbiB 2-polyprenylphe 91.2 0.29 6.4E-06 52.1 5.1 48 646-700 118-165 (437)
488 KOG0603 Ribosomal protein S6 k 91.0 0.11 2.4E-06 55.3 1.6 64 645-714 321-385 (612)
489 KOG1290 Serine/threonine prote 90.9 0.31 6.7E-06 50.3 4.6 65 646-713 78-150 (590)
490 COG2112 Predicted Ser/Thr prot 90.9 0.65 1.4E-05 41.6 6.0 52 651-708 27-78 (201)
491 KOG1345 Serine/threonine kinas 90.8 0.16 3.4E-06 48.3 2.2 64 645-711 23-87 (378)
492 PF13504 LRR_7: Leucine rich r 90.5 0.17 3.6E-06 25.9 1.2 13 41-53 2-14 (17)
493 KOG4258 Insulin/growth factor 90.4 0.26 5.5E-06 54.1 3.7 30 636-666 985-1014(1025)
494 PRK04750 ubiB putative ubiquin 90.4 0.43 9.3E-06 51.8 5.5 37 645-684 119-155 (537)
495 PF03109 ABC1: ABC1 family; I 90.1 0.13 2.8E-06 43.5 1.1 48 645-699 11-58 (119)
496 KOG3864 Uncharacterized conser 90.1 0.039 8.4E-07 50.0 -2.3 81 41-121 102-185 (221)
497 COG0515 SPS1 Serine/threonine 89.8 0.78 1.7E-05 46.8 6.9 62 648-714 2-67 (384)
498 KOG3864 Uncharacterized conser 89.4 0.04 8.6E-07 49.9 -2.7 80 65-144 102-184 (221)
499 KOG1163 Casein kinase (serine/ 88.3 0.66 1.4E-05 43.4 4.2 57 644-704 13-69 (341)
500 KOG0696 Serine/threonine prote 87.2 0.13 2.9E-06 51.5 -0.9 65 645-711 348-416 (683)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.1e-78 Score=711.62 Aligned_cols=688 Identities=35% Similarity=0.562 Sum_probs=586.0
Q ss_pred CCCCcccceeeCCCCCCeEEEEcCCCCCCcccCccccCCCCCCEEeCCCCCCCccCChhh-cCCCCCcEEecCCCcCccc
Q 046340 1 RHFCQWKGVTCSPRHQRVTGLRLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRDEIPQEI-GYLFRLQILALHNNTFGGQ 79 (715)
Q Consensus 1 ~~~c~~~~~~~~~~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~-~~l~~L~~L~Ls~n~i~~~ 79 (715)
+++|.|.|++|.. .++|+.|+|+++++++.++..|..+++|++|+|++|.+.+..|..+ .++++|++|+|++|.+++.
T Consensus 55 ~~~c~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~ 133 (968)
T PLN00113 55 ADVCLWQGITCNN-SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGS 133 (968)
T ss_pred CCCCcCcceecCC-CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccc
Confidence 4789999999985 3799999999999999999999999999999999999987777665 4999999999999999877
Q ss_pred CCccccCCCCCCEEEccCCcCccCccccccCCCCCCEEEeeccccccccCccccCCCCCCEEEcccCcceecCCccccCC
Q 046340 80 IPDNISHCVNLESLGLGVNELVGKVPGKLGSLSKLWILSVHYNSLSGEIPSSFGNLSSLEFLSAAANQFVGQFPETLSEL 159 (715)
Q Consensus 80 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l 159 (715)
.|. +.+++|++|++++|.+.+..|..++.+++|++|++++|.+.+..|..+.++++|++|++++|.+.+..|..+..+
T Consensus 134 ~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 211 (968)
T PLN00113 134 IPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQM 211 (968)
T ss_pred cCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCc
Confidence 775 568999999999999999999999999999999999999998999999999999999999999999999999999
Q ss_pred CCCCEEEeecccCcccCCccccCCCCCcEEEccCCccceecCcchhcCCCCCCEEEeeCccccccCCccccCCCCCCEEE
Q 046340 160 KMMRYISFGENKLSGEIPFSIYNLSSLTHFYFPFNQLQGSLPSDLGFTLPNLEVLNVGGNQFTGPIPASISNASNLMRLT 239 (715)
Q Consensus 160 ~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~ 239 (715)
++|++|++++|.+++..|..+..+++|++|++++|.+.+.+|..+. .+++|+.|++++|.+++..|..+.++++|++|+
T Consensus 212 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 290 (968)
T PLN00113 212 KSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLG-NLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLD 290 (968)
T ss_pred CCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHh-CCCCCCEEECcCCeeeccCchhHhhccCcCEEE
Confidence 9999999999999999999999999999999999999988888776 799999999999999999999999999999999
Q ss_pred eecccceecccc-ccCcCCCcEEEcccCCCCCCCCCCccccccccccCCCCCEEEccCCcccccCChhHhhccccCcEEE
Q 046340 240 IAKNGFSGRVPS-LENLYKLQWVSISHNHLGNYGEKDNLEFVNSLVNASRLELLEISDNNFGGMLPEAVGNLSTRLRKLI 318 (715)
Q Consensus 240 L~~n~~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~l~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~ 318 (715)
+++|.+.+..+. +..+++|+.|++++|.+.. ..+..+..+++|+.|++++|.+.+..|..+..+.. |+.|+
T Consensus 291 Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~-------~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~-L~~L~ 362 (968)
T PLN00113 291 LSDNSLSGEIPELVIQLQNLEILHLFSNNFTG-------KIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNN-LTVLD 362 (968)
T ss_pred CcCCeeccCCChhHcCCCCCcEEECCCCccCC-------cCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCC-CcEEE
Confidence 999999877766 8899999999999998875 23346778899999999999999999998888855 99999
Q ss_pred ccccceeecCCccccCCCCCCEEEcCCceeeeecCccccCCCCccEEEccCCcccccCCccccCCCCCCeEeccCCcccc
Q 046340 319 VGNNQLFGNIPSGLRNLVNLELLHLGGNQFTGQIPGSIGDLHKLQWLMLPANEFWGEIPSSIGNLTSLAILAFDENMLEG 398 (715)
Q Consensus 319 l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~ 398 (715)
+++|.+++..|..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+++..|..|.++++|+.|++++|.+.+
T Consensus 363 Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 442 (968)
T PLN00113 363 LSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQG 442 (968)
T ss_pred CCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcccccCCCCCEEeCcCcccccccCccccccccccceEEccCCcccccCCcCCcCCCCCCceeccCCcCccccChhhh
Q 046340 399 SIPSSLGKCQNLILLDLSNNNLSGTIPTEVIGLSSLSIYLDLSQNQLNGSLPPNFGILKNLGGIDISENKLSGEIPNSLG 478 (715)
Q Consensus 399 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 478 (715)
..+..+..+++|+.|++++|++.+..|..+ +...+ +.|++++|++++..|..|..+++|+.|++++|++.+..|..+.
T Consensus 443 ~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L-~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 520 (968)
T PLN00113 443 RINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRL-ENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELS 520 (968)
T ss_pred ccChhhccCCCCcEEECcCceeeeecCccc-ccccc-eEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHc
Confidence 999989999999999999999998777654 45666 8999999999999999999999999999999999999999999
Q ss_pred cCcccccccccCCcccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEeCCCCcccccCCCCCCCCCCCccc
Q 046340 479 SCIRLEELVMKGNFFQGNIPSSFSSLRGMQNLDLSRNNLSGRIPKYFENFFFLQNLNLSSNHFEGEVPVKGVFSNSSAIS 558 (715)
Q Consensus 479 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~~~~~ 558 (715)
.+++|++|++++|.+++.+|..|..+++|+.|+|++|++++..|..+.++++|+.+++++|++.+.+|..+.+.++....
T Consensus 521 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~ 600 (968)
T PLN00113 521 SCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASA 600 (968)
T ss_pred CccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888888888888
Q ss_pred cCCCCCCCCcccccccCCCccccccccccccceEehhhhHHHHHHhhhheeeeEEecccCcc-cCCCCCc-hh-----h-
Q 046340 559 LDGNDNLCGGISELHLSTCSIKESKQSRSRSLKLIIPVVTVILLVTGMSCLIITSRRSKSKR-ELATPPS-AL-----L- 630 (715)
Q Consensus 559 ~~~n~~~c~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~-----~- 630 (715)
+.||+..|+..+......|..... ....+.+++++++++++++++++++++++++++.. +...... .+ .
T Consensus 601 ~~~n~~lc~~~~~~~~~~c~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (968)
T PLN00113 601 VAGNIDLCGGDTTSGLPPCKRVRK---TPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDS 677 (968)
T ss_pred hcCCccccCCccccCCCCCccccc---cceeeeehhHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccc
Confidence 999999998655444455542211 11112222222222222222222222223222111 1000000 00 0
Q ss_pred cccccchHHHHHHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceE
Q 046340 631 ASVLRVSYQNLIKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKI 710 (715)
Q Consensus 631 ~~~~~~~~~~~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l 710 (715)
.....++++++ ...|...+.||+|+||.||+|+....+ ..||||+++.... ...+|++++++++|||||++
T Consensus 678 ~~~~~~~~~~~---~~~~~~~~~ig~G~~g~Vy~~~~~~~~--~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~ 748 (968)
T PLN00113 678 KVSKSITINDI---LSSLKEENVISRGKKGASYKGKSIKNG--MQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKL 748 (968)
T ss_pred ccchhhhHHHH---HhhCCcccEEccCCCeeEEEEEECCCC--cEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceE
Confidence 01122344444 345677789999999999999975443 3899999964322 12456889999999999999
Q ss_pred EEEe
Q 046340 711 ITSC 714 (715)
Q Consensus 711 ~g~~ 714 (715)
+|+|
T Consensus 749 ~~~~ 752 (968)
T PLN00113 749 IGLC 752 (968)
T ss_pred EEEE
Confidence 9998
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.6e-58 Score=541.45 Aligned_cols=516 Identities=35% Similarity=0.574 Sum_probs=478.4
Q ss_pred CCCCCEEeCCCCCCCccCChhhcCCCCCcEEecCCCcCcccCCccc-cCCCCCCEEEccCCcCccCccccccCCCCCCEE
Q 046340 39 LSFLRVLDLKNNSFRDEIPQEIGYLFRLQILALHNNTFGGQIPDNI-SHCVNLESLGLGVNELVGKVPGKLGSLSKLWIL 117 (715)
Q Consensus 39 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 117 (715)
..+++.|||++|.+++..+..|..+++|++|+|++|++.+.+|..+ ..+++|++|++++|++++..|. +.+++|++|
T Consensus 68 ~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L 145 (968)
T PLN00113 68 SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETL 145 (968)
T ss_pred CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEE
Confidence 4589999999999999999999999999999999999988787765 4999999999999999877765 568999999
Q ss_pred EeeccccccccCccccCCCCCCEEEcccCcceecCCccccCCCCCCEEEeecccCcccCCccccCCCCCcEEEccCCccc
Q 046340 118 SVHYNSLSGEIPSSFGNLSSLEFLSAAANQFVGQFPETLSELKMMRYISFGENKLSGEIPFSIYNLSSLTHFYFPFNQLQ 197 (715)
Q Consensus 118 ~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~ 197 (715)
+|++|.+++..|..+.++++|++|++++|.+.+..|..+.++++|++|++++|.+.+..|..+..+++|+.|++++|.+.
T Consensus 146 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 225 (968)
T PLN00113 146 DLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLS 225 (968)
T ss_pred ECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccC
Confidence 99999999889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCcchhcCCCCCCEEEeeCccccccCCccccCCCCCCEEEeecccceecccc-ccCcCCCcEEEcccCCCCCCCCCCc
Q 046340 198 GSLPSDLGFTLPNLEVLNVGGNQFTGPIPASISNASNLMRLTIAKNGFSGRVPS-LENLYKLQWVSISHNHLGNYGEKDN 276 (715)
Q Consensus 198 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~L~~n~~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~ 276 (715)
+.+|..+. .+++|+.|++++|.+++..|..+.++++|++|++++|.+.+..+. +..+++|+.|++++|.+..
T Consensus 226 ~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~------ 298 (968)
T PLN00113 226 GEIPYEIG-GLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSG------ 298 (968)
T ss_pred CcCChhHh-cCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeecc------
Confidence 88888876 899999999999999999999999999999999999999876665 8899999999999998865
Q ss_pred cccccccccCCCCCEEEccCCcccccCChhHhhccccCcEEEccccceeecCCccccCCCCCCEEEcCCceeeeecCccc
Q 046340 277 LEFVNSLVNASRLELLEISDNNFGGMLPEAVGNLSTRLRKLIVGNNQLFGNIPSGLRNLVNLELLHLGGNQFTGQIPGSI 356 (715)
Q Consensus 277 ~~~~~~l~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~ 356 (715)
..+..+..+++|+.|++++|.+.+..|..+..++. |+.|++++|.+.+..|..+..+++|+.|++++|.+.+..|..+
T Consensus 299 -~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~-L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~ 376 (968)
T PLN00113 299 -EIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPR-LQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGL 376 (968)
T ss_pred -CCChhHcCCCCCcEEECCCCccCCcCChhHhcCCC-CCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhH
Confidence 23446778899999999999999999999888865 9999999999999999999999999999999999999999999
Q ss_pred cCCCCccEEEccCCcccccCCccccCCCCCCeEeccCCcccccCCcccccCCCCCEEeCcCcccccccCccccccccccc
Q 046340 357 GDLHKLQWLMLPANEFWGEIPSSIGNLTSLAILAFDENMLEGSIPSSLGKCQNLILLDLSNNNLSGTIPTEVIGLSSLSI 436 (715)
Q Consensus 357 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~l~~ 436 (715)
..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+++..|..|..+++|+.|++++|.+.+.++..+..++.+ +
T Consensus 377 ~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L-~ 455 (968)
T PLN00113 377 CSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSL-Q 455 (968)
T ss_pred hCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCC-c
Confidence 999999999999999999999999999999999999999999999999999999999999999998888888888888 8
Q ss_pred eEEccCCcccccCCcCCcCCCCCCceeccCCcCccccChhhhcCcccccccccCCcccccCcccCCCCCCCCEEeCCCCc
Q 046340 437 YLDLSQNQLNGSLPPNFGILKNLGGIDISENKLSGEIPNSLGSCIRLEELVMKGNFFQGNIPSSFSSLRGMQNLDLSRNN 516 (715)
Q Consensus 437 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 516 (715)
.|++++|++.+..|..+ ..++|+.|++++|++++..|..+..+++|++|++++|.+.+.+|..+..+++|+.|+|++|.
T Consensus 456 ~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 534 (968)
T PLN00113 456 MLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQ 534 (968)
T ss_pred EEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCc
Confidence 99999999998888766 45899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCccccCCCCCCEEeCCCCcccccCCCC-CCCCCCCccccCCCCCCCC
Q 046340 517 LSGRIPKYFENFFFLQNLNLSSNHFEGEVPVK-GVFSNSSAISLDGNDNLCG 567 (715)
Q Consensus 517 l~~~~~~~~~~~~~L~~L~ls~N~l~~~~~~~-~~~~~~~~~~~~~n~~~c~ 567 (715)
+++..|..|.++++|++|++++|++.+..|.. ..+.+++.+++.+|+..+.
T Consensus 535 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~ 586 (968)
T PLN00113 535 LSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGS 586 (968)
T ss_pred ccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceee
Confidence 99999999999999999999999999888754 4466789999999987653
No 3
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-42 Score=344.55 Aligned_cols=374 Identities=24% Similarity=0.241 Sum_probs=308.2
Q ss_pred EEEeecccCcccCCccccCCCCCcEEEccCCccceecCcchhcCCCCCCEEEeeCccccccCCccccCCCCCCEEEeecc
Q 046340 164 YISFGENKLSGEIPFSIYNLSSLTHFYFPFNQLQGSLPSDLGFTLPNLEVLNVGGNQFTGPIPASISNASNLMRLTIAKN 243 (715)
Q Consensus 164 ~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~L~~n 243 (715)
.|++++|++..+.+..|.++++|+.+++..|.++ .+|.... ...+|+.|+|.+|.|+++....++.++.|+.|||+.|
T Consensus 82 ~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~-~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN 159 (873)
T KOG4194|consen 82 TLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGH-ESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRN 159 (873)
T ss_pred eeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccc-cccceeEEeeeccccccccHHHHHhHhhhhhhhhhhc
Confidence 4555555555555555556666666666666555 5554332 3445666666666666666666667777777777777
Q ss_pred cceecccc-ccCcCCCcEEEcccCCCCCCCCCCccccccccccCCCCCEEEccCCcccccCChhHhhccccCcEEEcccc
Q 046340 244 GFSGRVPS-LENLYKLQWVSISHNHLGNYGEKDNLEFVNSLVNASRLELLEISDNNFGGMLPEAVGNLSTRLRKLIVGNN 322 (715)
Q Consensus 244 ~~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~l~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n 322 (715)
.++.+... |..-.++++|+|+.|.++.+... .|..+.+|..|.|+.|+++...+..|..++. |+.|+|..|
T Consensus 160 ~is~i~~~sfp~~~ni~~L~La~N~It~l~~~-------~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~-L~~LdLnrN 231 (873)
T KOG4194|consen 160 LISEIPKPSFPAKVNIKKLNLASNRITTLETG-------HFDSLNSLLTLKLSRNRITTLPQRSFKRLPK-LESLDLNRN 231 (873)
T ss_pred hhhcccCCCCCCCCCceEEeeccccccccccc-------cccccchheeeecccCcccccCHHHhhhcch-hhhhhcccc
Confidence 77655433 66667777788888877765432 5667778889999999998776677776765 999999999
Q ss_pred ceeecCCccccCCCCCCEEEcCCceeeeecCccccCCCCccEEEccCCcccccCCccccCCCCCCeEeccCCcccccCCc
Q 046340 323 QLFGNIPSGLRNLVNLELLHLGGNQFTGQIPGSIGDLHKLQWLMLPANEFWGEIPSSIGNLTSLAILAFDENMLEGSIPS 402 (715)
Q Consensus 323 ~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~ 402 (715)
+|.-.---.|.++++|+.|.|..|.|.....+.|-.|.++++|+|+.|+++.....++.++++|+.|++++|.|..+.++
T Consensus 232 ~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d 311 (873)
T KOG4194|consen 232 RIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHID 311 (873)
T ss_pred ceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecc
Confidence 99755566799999999999999999988899999999999999999999988888999999999999999999999999
Q ss_pred ccccCCCCCEEeCcCcccccccCccccccccccceEEccCCcccccCCcCCcCCCCCCceeccCCcCcccc---Chhhhc
Q 046340 403 SLGKCQNLILLDLSNNNLSGTIPTEVIGLSSLSIYLDLSQNQLNGSLPPNFGILKNLGGIDISENKLSGEI---PNSLGS 479 (715)
Q Consensus 403 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~---~~~~~~ 479 (715)
....+++|++|+|++|+++...+..+..+..+ +.|+|++|+++......|.++++|++|||++|.++..+ ...|.+
T Consensus 312 ~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~L-e~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~g 390 (873)
T KOG4194|consen 312 SWSFTQKLKELDLSSNRITRLDEGSFRVLSQL-EELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNG 390 (873)
T ss_pred hhhhcccceeEeccccccccCChhHHHHHHHh-hhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhcc
Confidence 99999999999999999998888888888888 89999999999888889999999999999999987643 346888
Q ss_pred CcccccccccCCcccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEeCCCCcccccCCCCC
Q 046340 480 CIRLEELVMKGNFFQGNIPSSFSSLRGMQNLDLSRNNLSGRIPKYFENFFFLQNLNLSSNHFEGEVPVKG 549 (715)
Q Consensus 480 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~ls~N~l~~~~~~~~ 549 (715)
+++|+.|.+.+|++..+...+|.++++|++|||.+|.|..+-|++|..+ .|++|.+..-.+.|.|...|
T Consensus 391 l~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssflCDCql~W 459 (873)
T KOG4194|consen 391 LPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSFLCDCQLKW 459 (873)
T ss_pred chhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccceEEeccHHH
Confidence 9999999999999999999999999999999999999999999999999 89999998888877776554
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-42 Score=339.06 Aligned_cols=366 Identities=20% Similarity=0.199 Sum_probs=253.5
Q ss_pred CCCEEeCCCCCCCccCChhhcCCCCCcEEecCCCcCcccCCccccCCCCCCEEEccCCcCccCccccccCCCCCCEEEee
Q 046340 41 FLRVLDLKNNSFRDEIPQEIGYLFRLQILALHNNTFGGQIPDNISHCVNLESLGLGVNELVGKVPGKLGSLSKLWILSVH 120 (715)
Q Consensus 41 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 120 (715)
..+.||+|+|.+.++.+..|.++++|+.+++.+|.++ .+|...+...+|+.|+|.+|.|+.+..+++..++.|+.||||
T Consensus 79 ~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLS 157 (873)
T KOG4194|consen 79 QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLS 157 (873)
T ss_pred ceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhh
Confidence 4456777777777777777777777777777777776 556555555667777777777777766777777777777777
Q ss_pred ccccccccCccccCCCCCCEEEcccCcceecCCccccCCCCCCEEEeecccCcccCCccccCCCCCcEEEccCCccceec
Q 046340 121 YNSLSGEIPSSFGNLSSLEFLSAAANQFVGQFPETLSELKMMRYISFGENKLSGEIPFSIYNLSSLTHFYFPFNQLQGSL 200 (715)
Q Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~ 200 (715)
.|.|+......|..-.++++|+|++|.|+.+..+.|..+.+|..|.|+.|+|+...+..|..+++|+.|+|..|+|. .+
T Consensus 158 rN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~ir-iv 236 (873)
T KOG4194|consen 158 RNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIR-IV 236 (873)
T ss_pred hchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhcccccee-ee
Confidence 77777555556666667777777777777777777777777777777777777666667777777777777777775 55
Q ss_pred CcchhcCCCCCCEEEeeCccccccCCccccCCCCCCEEEeecccceecccc-ccCcCCCcEEEcccCCCCCCCCCCcccc
Q 046340 201 PSDLGFTLPNLEVLNVGGNQFTGPIPASISNASNLMRLTIAKNGFSGRVPS-LENLYKLQWVSISHNHLGNYGEKDNLEF 279 (715)
Q Consensus 201 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~L~~n~~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 279 (715)
....|.++++|+.|.+..|.+.......|..+.++++|+|+.|++...... +.++..|+.|++++|.+..+..
T Consensus 237 e~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~------ 310 (873)
T KOG4194|consen 237 EGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHI------ 310 (873)
T ss_pred hhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeec------
Confidence 455566677777777777777766666777777777777777777655444 6667777777777776655332
Q ss_pred ccccccCCCCCEEEccCCcccccCChhHhhccccCcEEEccccceeecCCccccCCCCCCEEEcCCceeeeecC---ccc
Q 046340 280 VNSLVNASRLELLEISDNNFGGMLPEAVGNLSTRLRKLIVGNNQLFGNIPSGLRNLVNLELLHLGGNQFTGQIP---GSI 356 (715)
Q Consensus 280 ~~~l~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~---~~~ 356 (715)
.....+++|+.|+|++|+|+...+..|..+.. |++|.|++|++......+|..+++|++|||++|.++..+. ..|
T Consensus 311 -d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~-Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f 388 (873)
T KOG4194|consen 311 -DSWSFTQKLKELDLSSNRITRLDEGSFRVLSQ-LEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAF 388 (873)
T ss_pred -chhhhcccceeEeccccccccCChhHHHHHHH-hhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhh
Confidence 13344667777777777777666666666643 7777777777776666677777777777777777665433 456
Q ss_pred cCCCCccEEEccCCcccccCCccccCCCCCCeEeccCCcccccCCcccccCCCCCEEeCcC
Q 046340 357 GDLHKLQWLMLPANEFWGEIPSSIGNLTSLAILAFDENMLEGSIPSSLGKCQNLILLDLSN 417 (715)
Q Consensus 357 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~L~~ 417 (715)
.++++|+.|++.+|++..+...+|.++++|+.|+|.+|.|..+.+.+|..+ .|++|.+..
T Consensus 389 ~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nS 448 (873)
T KOG4194|consen 389 NGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNS 448 (873)
T ss_pred ccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcc
Confidence 677777777777777766666677777777777777777777777777766 677666644
No 5
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=2e-41 Score=322.07 Aligned_cols=482 Identities=25% Similarity=0.373 Sum_probs=377.1
Q ss_pred hcCCCCCcEEecCCCcCcccCCccccCCCCCCEEEccCCcCccCccccccCCCCCCEEEeeccccccccCccccCCCCCC
Q 046340 60 IGYLFRLQILALHNNTFGGQIPDNISHCVNLESLGLGVNELVGKVPGKLGSLSKLWILSVHYNSLSGEIPSSFGNLSSLE 139 (715)
Q Consensus 60 ~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 139 (715)
-..-..|+.|.+++|.++ ...+.+.++..|.+|++++|++. ..|.+++.+.+++.++.++|+++ .+|+.+..+.+|+
T Consensus 41 wW~qv~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~ 117 (565)
T KOG0472|consen 41 WWEQVDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLV 117 (565)
T ss_pred hhhhcchhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhh
Confidence 444577999999999998 45556889999999999999997 67888999999999999999999 7889999999999
Q ss_pred EEEcccCcceecCCccccCCCCCCEEEeecccCcccCCccccCCCCCcEEEccCCccceecCcchhcCCCCCCEEEeeCc
Q 046340 140 FLSAAANQFVGQFPETLSELKMMRYISFGENKLSGEIPFSIYNLSSLTHFYFPFNQLQGSLPSDLGFTLPNLEVLNVGGN 219 (715)
Q Consensus 140 ~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~L~~n 219 (715)
.|+.++|.+.. .++.++.+-.|..++..+|+++ ..|..+.++.++..+++.+|++. ..|++.. .++.|+++|...|
T Consensus 118 ~l~~s~n~~~e-l~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~-~l~~~~i-~m~~L~~ld~~~N 193 (565)
T KOG0472|consen 118 KLDCSSNELKE-LPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLK-ALPENHI-AMKRLKHLDCNSN 193 (565)
T ss_pred hhhccccceee-cCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchh-hCCHHHH-HHHHHHhcccchh
Confidence 99999999885 5566788888999999999999 45778889999999999999998 7777665 3889999999999
Q ss_pred cccccCCccccCCCCCCEEEeecccceeccccccCcCCCcEEEcccCCCCCCCCCCccccccccccCCCCCEEEccCCcc
Q 046340 220 QFTGPIPASISNASNLMRLTIAKNGFSGRVPSLENLYKLQWVSISHNHLGNYGEKDNLEFVNSLVNASRLELLEISDNNF 299 (715)
Q Consensus 220 ~l~~~~~~~l~~~~~L~~L~L~~n~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~l~~~~~L~~L~ls~n~i 299 (715)
.+. .+|..++.+.+|+.|++..|.+.. .|.|.++..|+++.++.|.+..++.. ....++++..||+.+|++
T Consensus 194 ~L~-tlP~~lg~l~~L~~LyL~~Nki~~-lPef~gcs~L~Elh~g~N~i~~lpae-------~~~~L~~l~vLDLRdNkl 264 (565)
T KOG0472|consen 194 LLE-TLPPELGGLESLELLYLRRNKIRF-LPEFPGCSLLKELHVGENQIEMLPAE-------HLKHLNSLLVLDLRDNKL 264 (565)
T ss_pred hhh-cCChhhcchhhhHHHHhhhccccc-CCCCCccHHHHHHHhcccHHHhhHHH-------Hhcccccceeeecccccc
Confidence 888 678889999999999999999875 45899999999999999988765432 445788999999999999
Q ss_pred cccCChhHhhccccCcEEEccccceeecCCccccCCCCCCEEEcCCceeeeecCccccCC--CCccEEE-------ccCC
Q 046340 300 GGMLPEAVGNLSTRLRKLIVGNNQLFGNIPSGLRNLVNLELLHLGGNQFTGQIPGSIGDL--HKLQWLM-------LPAN 370 (715)
Q Consensus 300 ~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l--~~L~~L~-------L~~n 370 (715)
. ..|+.+.-+. +|+.||+++|.|++ .|..++++ .|+.|.+.+|.+..+-.+.+.+- .-|++|. ++..
T Consensus 265 k-e~Pde~clLr-sL~rLDlSNN~is~-Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~s 340 (565)
T KOG0472|consen 265 K-EVPDEICLLR-SLERLDLSNNDISS-LPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQS 340 (565)
T ss_pred c-cCchHHHHhh-hhhhhcccCCcccc-CCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCC
Confidence 8 6677777774 49999999999985 56678888 99999999998864322222110 0122221 1111
Q ss_pred ccc-----ccCCccc---cCCCCCCeEeccCCcccccCCcccccC--CCCCEEeCcCcccccccCccccccccccceEEc
Q 046340 371 EFW-----GEIPSSI---GNLTSLAILAFDENMLEGSIPSSLGKC--QNLILLDLSNNNLSGTIPTEVIGLSSLSIYLDL 440 (715)
Q Consensus 371 ~i~-----~~~~~~~---~~l~~L~~L~l~~n~i~~~~~~~~~~~--~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~L~L 440 (715)
+-. +..+..| ..+.+.+.|++++-+++..+.+.|... .-.+..+++.|++. .+|..+..+..+...+.+
T Consensus 341 e~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~l 419 (565)
T KOG0472|consen 341 EGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVL 419 (565)
T ss_pred cccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHh
Confidence 000 0011112 234567888888888885444444432 23678888888887 678777777777666777
Q ss_pred cCCcccccCCcCCcCCCCCCceeccCCcCccccChhhhcCcccccccccCCcccccCcccCCCCCCCCEEeCCCCccccc
Q 046340 441 SQNQLNGSLPPNFGILKNLGGIDISENKLSGEIPNSLGSCIRLEELVMKGNFFQGNIPSSFSSLRGMQNLDLSRNNLSGR 520 (715)
Q Consensus 441 s~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 520 (715)
++|.++ ..|..+..+++|..|+|++|-+- ..|..++.+.+|+.|+++.|++. .+|.+...+..++.+-.++|++..+
T Consensus 420 snn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~v 496 (565)
T KOG0472|consen 420 SNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSV 496 (565)
T ss_pred hcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhcccccccc
Confidence 777776 66777788888888888888776 56777788888888888888887 6777777777777777888888888
Q ss_pred CCccccCCCCCCEEeCCCCcccccCCCCCCCCCCCccccCCCCCC
Q 046340 521 IPKYFENFFFLQNLNLSSNHFEGEVPVKGVFSNSSAISLDGNDNL 565 (715)
Q Consensus 521 ~~~~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~~~~~~~~n~~~ 565 (715)
.|+.+.+|.+|.+|||.+|.+...+|..+.+.+++.+.++|||+.
T Consensus 497 d~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 497 DPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred ChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCccC
Confidence 888788888888888888888888888788888888888888876
No 6
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=8.8e-41 Score=317.70 Aligned_cols=476 Identities=29% Similarity=0.393 Sum_probs=390.1
Q ss_pred CCCCEEeCCCCCCCccCChhhcCCCCCcEEecCCCcCcccCCccccCCCCCCEEEccCCcCccCccccccCCCCCCEEEe
Q 046340 40 SFLRVLDLKNNSFRDEIPQEIGYLFRLQILALHNNTFGGQIPDNISHCVNLESLGLGVNELVGKVPGKLGSLSKLWILSV 119 (715)
Q Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 119 (715)
..+..|++++|.++. ..+.+.++..|.+|++++|++. ..|.+++.+..++.|+.++|++. ..|.+.+.+..|++|+.
T Consensus 45 v~l~~lils~N~l~~-l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~ 121 (565)
T KOG0472|consen 45 VDLQKLILSHNDLEV-LREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDC 121 (565)
T ss_pred cchhhhhhccCchhh-ccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhc
Confidence 467889999999984 4556899999999999999998 68889999999999999999997 78899999999999999
Q ss_pred eccccccccCccccCCCCCCEEEcccCcceecCCccccCCCCCCEEEeecccCcccCCccccCCCCCcEEEccCCcccee
Q 046340 120 HYNSLSGEIPSSFGNLSSLEFLSAAANQFVGQFPETLSELKMMRYISFGENKLSGEIPFSIYNLSSLTHFYFPFNQLQGS 199 (715)
Q Consensus 120 s~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~ 199 (715)
++|.+. ..++.++.+..|+.|+..+|++++ .|.++..+.+|..+++.+|+++...|..+. ++.|++++...|.++ .
T Consensus 122 s~n~~~-el~~~i~~~~~l~dl~~~~N~i~s-lp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-t 197 (565)
T KOG0472|consen 122 SSNELK-ELPDSIGRLLDLEDLDATNNQISS-LPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-T 197 (565)
T ss_pred ccccee-ecCchHHHHhhhhhhhcccccccc-CchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-c
Confidence 999998 677889999999999999999985 566678888999999999999977666655 999999999999997 9
Q ss_pred cCcchhcCCCCCCEEEeeCccccccCCccccCCCCCCEEEeecccceecccc-ccCcCCCcEEEcccCCCCCCCCCCccc
Q 046340 200 LPSDLGFTLPNLEVLNVGGNQFTGPIPASISNASNLMRLTIAKNGFSGRVPS-LENLYKLQWVSISHNHLGNYGEKDNLE 278 (715)
Q Consensus 200 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~L~~n~~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~ 278 (715)
+|.+++ .+.+|+.|++..|++. ..| .|.+|..|.++.+..|.+...... ...++++..||+..|++..+++
T Consensus 198 lP~~lg-~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklke~Pd----- 269 (565)
T KOG0472|consen 198 LPPELG-GLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLKEVPD----- 269 (565)
T ss_pred CChhhc-chhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccccCch-----
Confidence 999998 8999999999999998 455 899999999999999999876655 6799999999999999987654
Q ss_pred cccccccCCCCCEEEccCCcccccCChhHhhccccCcEEEccccceeecCCccccCCC--CCCEEE-------cCCce--
Q 046340 279 FVNSLVNASRLELLEISDNNFGGMLPEAVGNLSTRLRKLIVGNNQLFGNIPSGLRNLV--NLELLH-------LGGNQ-- 347 (715)
Q Consensus 279 ~~~~l~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~--~L~~L~-------L~~n~-- 347 (715)
.+..+.+|++||+|+|.|+ ..|..++.+ .|+.|-+.+|.+..+-.+.+..-+ -|++|. ++.-.
T Consensus 270 ---e~clLrsL~rLDlSNN~is-~Lp~sLgnl--hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~ 343 (565)
T KOG0472|consen 270 ---EICLLRSLERLDLSNNDIS-SLPYSLGNL--HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGG 343 (565)
T ss_pred ---HHHHhhhhhhhcccCCccc-cCCcccccc--eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCccc
Confidence 4566789999999999999 456677887 499999999998643222221110 011111 11110
Q ss_pred -ee-e-ecCcc---ccCCCCccEEEccCCcccccCCccccCCC--CCCeEeccCCcccccCCcccccCCCCC-EEeCcCc
Q 046340 348 -FT-G-QIPGS---IGDLHKLQWLMLPANEFWGEIPSSIGNLT--SLAILAFDENMLEGSIPSSLGKCQNLI-LLDLSNN 418 (715)
Q Consensus 348 -i~-~-~~~~~---~~~l~~L~~L~L~~n~i~~~~~~~~~~l~--~L~~L~l~~n~i~~~~~~~~~~~~~L~-~L~L~~n 418 (715)
-+ . ..+.. ...+.+.+.|++++-+++....+.|.... -....+++.|++. .+|..+..+..+. .+.+++|
T Consensus 344 ~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn 422 (565)
T KOG0472|consen 344 TETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNN 422 (565)
T ss_pred ccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcC
Confidence 00 0 01111 23456788999999999776666665432 3778999999998 5666665555444 4566666
Q ss_pred ccccccCccccccccccceEEccCCcccccCCcCCcCCCCCCceeccCCcCccccChhhhcCcccccccccCCcccccCc
Q 046340 419 NLSGTIPTEVIGLSSLSIYLDLSQNQLNGSLPPNFGILKNLGGIDISENKLSGEIPNSLGSCIRLEELVMKGNFFQGNIP 498 (715)
Q Consensus 419 ~l~~~~~~~~~~~~~l~~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 498 (715)
.+. .+|..+..++.+ ..|+|++|.+. ..|..++.+..||.||+|.|++. ..|.+...+..++.+-.++|++..+.+
T Consensus 423 ~is-fv~~~l~~l~kL-t~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~ 498 (565)
T KOG0472|consen 423 KIS-FVPLELSQLQKL-TFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDP 498 (565)
T ss_pred ccc-cchHHHHhhhcc-eeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccCh
Confidence 666 788888889988 89999999998 57778888999999999999998 789999988999999999999998888
Q ss_pred ccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEeCCCCccc
Q 046340 499 SSFSSLRGMQNLDLSRNNLSGRIPKYFENFFFLQNLNLSSNHFE 542 (715)
Q Consensus 499 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~ls~N~l~ 542 (715)
+.+.+|.+|..|||.+|.+..+ |..+++|++|++|++.+|+|.
T Consensus 499 ~~l~nm~nL~tLDL~nNdlq~I-Pp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 499 SGLKNMRNLTTLDLQNNDLQQI-PPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred HHhhhhhhcceeccCCCchhhC-ChhhccccceeEEEecCCccC
Confidence 8899999999999999999854 567899999999999999998
No 7
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-37 Score=326.55 Aligned_cols=484 Identities=26% Similarity=0.315 Sum_probs=295.5
Q ss_pred EEcCCCCCCcccCccccCCCCCCEEeCCCCCCCccCChhhcCCCCCcEEecCCCcCcccCCccccCCCCCCEEEccCCcC
Q 046340 21 LRLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRDEIPQEIGYLFRLQILALHNNTFGGQIPDNISHCVNLESLGLGVNEL 100 (715)
Q Consensus 21 l~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 100 (715)
+|.+.+.+. .+|..+..-..+..|+++.|.+-..+-+...+.-.|+.|++++|++. .-|..+..+.+|+.|.++.|.|
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i 80 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYI 80 (1081)
T ss_pred cccccccCc-ccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhH
Confidence 344555554 33444444445666777766554433333344444677777766665 4555666666667777776666
Q ss_pred ccCccccccCCCCCCEEEeeccccccccCccccCCCCCCEEEcccCcceecCCccccCCCCCCEEEeecccCcccCCccc
Q 046340 101 VGKVPGKLGSLSKLWILSVHYNSLSGEIPSSFGNLSSLEFLSAAANQFVGQFPETLSELKMMRYISFGENKLSGEIPFSI 180 (715)
Q Consensus 101 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l 180 (715)
. ..|....++.+|++|.|..|.+. .+|..+..+++|+.|+++.|.+. ..|..+..+..+..+..++|.-.. .+
T Consensus 81 ~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~----~l 153 (1081)
T KOG0618|consen 81 R-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQ----RL 153 (1081)
T ss_pred h-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhh----hh
Confidence 5 44556666666777777666666 56666666666777777666665 344555556666666666661111 12
Q ss_pred cCCCCCcEEEccCCccceecCcchhcCCCCCCEEEeeCccccccCCccccCCCCCCEEEeecccceeccccccCcCCCcE
Q 046340 181 YNLSSLTHFYFPFNQLQGSLPSDLGFTLPNLEVLNVGGNQFTGPIPASISNASNLMRLTIAKNGFSGRVPSLENLYKLQW 260 (715)
Q Consensus 181 ~~l~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~L~~n~~~~~~~~~~~l~~L~~ 260 (715)
+... ++.+++..|.+.+.++.+.. .+.. .|+|+.|.+.. ..+..+++|+.+....|.+.... ...++++.
T Consensus 154 g~~~-ik~~~l~~n~l~~~~~~~i~-~l~~--~ldLr~N~~~~---~dls~~~~l~~l~c~rn~ls~l~---~~g~~l~~ 223 (1081)
T KOG0618|consen 154 GQTS-IKKLDLRLNVLGGSFLIDIY-NLTH--QLDLRYNEMEV---LDLSNLANLEVLHCERNQLSELE---ISGPSLTA 223 (1081)
T ss_pred cccc-chhhhhhhhhcccchhcchh-hhhe--eeecccchhhh---hhhhhccchhhhhhhhcccceEE---ecCcchhe
Confidence 2222 55666666666555555443 2222 46777776651 23455666666666666654321 22356666
Q ss_pred EEcccCCCCCCCCCCccccccccccCCCCCEEEccCCcccccCChhHhhccccCcEEEccccceeecCCccccCCCCCCE
Q 046340 261 VSISHNHLGNYGEKDNLEFVNSLVNASRLELLEISDNNFGGMLPEAVGNLSTRLRKLIVGNNQLFGNIPSGLRNLVNLEL 340 (715)
Q Consensus 261 L~l~~n~l~~~~~~~~~~~~~~l~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~ 340 (715)
|..++|.++... .-....+++++++++|+++. +|+++..+.. |+.+.+.+|.++ ..|..+...++|+.
T Consensus 224 L~a~~n~l~~~~---------~~p~p~nl~~~dis~n~l~~-lp~wi~~~~n-le~l~~n~N~l~-~lp~ri~~~~~L~~ 291 (1081)
T KOG0618|consen 224 LYADHNPLTTLD---------VHPVPLNLQYLDISHNNLSN-LPEWIGACAN-LEALNANHNRLV-ALPLRISRITSLVS 291 (1081)
T ss_pred eeeccCcceeec---------cccccccceeeecchhhhhc-chHHHHhccc-ceEecccchhHH-hhHHHHhhhhhHHH
Confidence 676776665311 11234567777777777763 3477766644 777777777775 45556666777777
Q ss_pred EEcCCceeeeecCccccCCCCccEEEccCCcccccCCccccCCCC-CCeEeccCCcccccCCcccccCCCCCEEeCcCcc
Q 046340 341 LHLGGNQFTGQIPGSIGDLHKLQWLMLPANEFWGEIPSSIGNLTS-LAILAFDENMLEGSIPSSLGKCQNLILLDLSNNN 419 (715)
Q Consensus 341 L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~-L~~L~l~~n~i~~~~~~~~~~~~~L~~L~L~~n~ 419 (715)
|+...|.+. -+|....++++|++|+|..|++....+..|.-... |+.|..+.|++.......=...+.|+.|++.+|.
T Consensus 292 l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~ 370 (1081)
T KOG0618|consen 292 LSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNH 370 (1081)
T ss_pred HHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCc
Confidence 777777776 45556666777777777777775444434444333 6666666666664432222345677777777777
Q ss_pred cccccCccccccccccceEEccCCcccccCCcCCcCCCCCCceeccCCcCccccChhhhcCcccccccccCCcccccCcc
Q 046340 420 LSGTIPTEVIGLSSLSIYLDLSQNQLNGSLPPNFGILKNLGGIDISENKLSGEIPNSLGSCIRLEELVMKGNFFQGNIPS 499 (715)
Q Consensus 420 l~~~~~~~~~~~~~l~~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 499 (715)
+++..-..+.+...+ +.|+|++|++.......+.++..|++|+||+|+++ .+|.....++.|+.|...+|++. ..|
T Consensus 371 Ltd~c~p~l~~~~hL-KVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP- 446 (1081)
T KOG0618|consen 371 LTDSCFPVLVNFKHL-KVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP- 446 (1081)
T ss_pred ccccchhhhccccce-eeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-
Confidence 776655556666666 67777777777555566777777777777777777 55677777777777777777776 444
Q ss_pred cCCCCCCCCEEeCCCCcccccC-CccccCCCCCCEEeCCCCcc
Q 046340 500 SFSSLRGMQNLDLSRNNLSGRI-PKYFENFFFLQNLNLSSNHF 541 (715)
Q Consensus 500 ~~~~l~~L~~L~L~~N~l~~~~-~~~~~~~~~L~~L~ls~N~l 541 (715)
.+..++.|+.+|+|.|+++... |... ..+.|++||+++|..
T Consensus 447 e~~~l~qL~~lDlS~N~L~~~~l~~~~-p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 447 ELAQLPQLKVLDLSCNNLSEVTLPEAL-PSPNLKYLDLSGNTR 488 (1081)
T ss_pred hhhhcCcceEEecccchhhhhhhhhhC-CCcccceeeccCCcc
Confidence 5667777777777777776543 2222 226777777777774
No 8
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-36 Score=318.20 Aligned_cols=487 Identities=26% Similarity=0.299 Sum_probs=317.9
Q ss_pred eEEEEcCCCCCCcccCccccCCCCCCEEeCCCCCCCccCChhhcCCCCCcEEecCCCcCcccCCccccCCCCCCEEEccC
Q 046340 18 VTGLRLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRDEIPQEIGYLFRLQILALHNNTFGGQIPDNISHCVNLESLGLGV 97 (715)
Q Consensus 18 v~~l~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 97 (715)
++.|++..|.+-....+.+.+.-+|+.|||++|.+. ..|..+..+.+|+.|+++.|-|. ..|....++.+|++|.|.+
T Consensus 23 ~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~ 100 (1081)
T KOG0618|consen 23 LQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKN 100 (1081)
T ss_pred HHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheecc
Confidence 666666666554433344444555777888877775 45666777777888888877776 5666777777788888877
Q ss_pred CcCccCccccccCCCCCCEEEeeccccccccCccccCCCCCCEEEcccCcceecCCccccCCCCCCEEEeecccCcccCC
Q 046340 98 NELVGKVPGKLGSLSKLWILSVHYNSLSGEIPSSFGNLSSLEFLSAAANQFVGQFPETLSELKMMRYISFGENKLSGEIP 177 (715)
Q Consensus 98 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~~ 177 (715)
|.+. ..|..+..+.+|+.||+++|.+. ..|..+..++.+..+..++|...... +... ++++++..|.+.+.++
T Consensus 101 n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~l----g~~~-ik~~~l~~n~l~~~~~ 173 (1081)
T KOG0618|consen 101 NRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRL----GQTS-IKKLDLRLNVLGGSFL 173 (1081)
T ss_pred chhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhh----cccc-chhhhhhhhhcccchh
Confidence 7764 66777777778888888887776 56666777777777777777322222 2222 6677777777776666
Q ss_pred ccccCCCCCcEEEccCCccceecCcchhcCCCCCCEEEeeCccccccCCccccCCCCCCEEEeecccceeccccccCcCC
Q 046340 178 FSIYNLSSLTHFYFPFNQLQGSLPSDLGFTLPNLEVLNVGGNQFTGPIPASISNASNLMRLTIAKNGFSGRVPSLENLYK 257 (715)
Q Consensus 178 ~~l~~l~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~L~~n~~~~~~~~~~~l~~ 257 (715)
..+..++. .|++.+|.+. .... ..+++|+.+....|++.... -.-++++.|+.+.|.+...... ..-.+
T Consensus 174 ~~i~~l~~--~ldLr~N~~~-~~dl---s~~~~l~~l~c~rn~ls~l~----~~g~~l~~L~a~~n~l~~~~~~-p~p~n 242 (1081)
T KOG0618|consen 174 IDIYNLTH--QLDLRYNEME-VLDL---SNLANLEVLHCERNQLSELE----ISGPSLTALYADHNPLTTLDVH-PVPLN 242 (1081)
T ss_pred cchhhhhe--eeecccchhh-hhhh---hhccchhhhhhhhcccceEE----ecCcchheeeeccCcceeeccc-ccccc
Confidence 66666555 6777777765 2211 14667777777777766321 2245677777777777643332 23346
Q ss_pred CcEEEcccCCCCCCCCCCccccccccccCCCCCEEEccCCcccccCChhHhhccccCcEEEccccceeecCCccccCCCC
Q 046340 258 LQWVSISHNHLGNYGEKDNLEFVNSLVNASRLELLEISDNNFGGMLPEAVGNLSTRLRKLIVGNNQLFGNIPSGLRNLVN 337 (715)
Q Consensus 258 L~~L~l~~n~l~~~~~~~~~~~~~~l~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~ 337 (715)
|+++++++|+++.++ +++..+.+|+.++..+|++. ..|..+....+ |+.|.+..|.+. .+|...+++++
T Consensus 243 l~~~dis~n~l~~lp--------~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~-L~~l~~~~nel~-yip~~le~~~s 311 (1081)
T KOG0618|consen 243 LQYLDISHNNLSNLP--------EWIGACANLEALNANHNRLV-ALPLRISRITS-LVSLSAAYNELE-YIPPFLEGLKS 311 (1081)
T ss_pred ceeeecchhhhhcch--------HHHHhcccceEecccchhHH-hhHHHHhhhhh-HHHHHhhhhhhh-hCCCcccccce
Confidence 777788877776644 35666777788888777774 45555555533 777777777776 34555666777
Q ss_pred CCEEEcCCceeeeecCccccCCCC-ccEEEccCCcccccCCccccCCCCCCeEeccCCcccccCCcccccCCCCCEEeCc
Q 046340 338 LELLHLGGNQFTGQIPGSIGDLHK-LQWLMLPANEFWGEIPSSIGNLTSLAILAFDENMLEGSIPSSLGKCQNLILLDLS 416 (715)
Q Consensus 338 L~~L~L~~n~i~~~~~~~~~~l~~-L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~L~ 416 (715)
|++|+|..|.+....+..|.-+.. |..|+.+.|.+.......=...+.|+.|++.+|.+++.....+.+...|+.|+|+
T Consensus 312 L~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLs 391 (1081)
T KOG0618|consen 312 LRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLS 391 (1081)
T ss_pred eeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeec
Confidence 888888887777544444444443 6777777777654432222345677777888887777766677777778888888
Q ss_pred CcccccccCccccccccccceEEccCCcccccCCcCCcCCCCCCceeccCCcCccccChhhhcCcccccccccCCccccc
Q 046340 417 NNNLSGTIPTEVIGLSSLSIYLDLSQNQLNGSLPPNFGILKNLGGIDISENKLSGEIPNSLGSCIRLEELVMKGNFFQGN 496 (715)
Q Consensus 417 ~n~l~~~~~~~~~~~~~l~~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 496 (715)
+|++.......+..+..+ ++|+||+|+++ .+|..+..++.|++|...+|++. ..| .+..++.|+.++++.|.++..
T Consensus 392 yNrL~~fpas~~~kle~L-eeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~ 467 (1081)
T KOG0618|consen 392 YNRLNSFPASKLRKLEEL-EELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEV 467 (1081)
T ss_pred ccccccCCHHHHhchHHh-HHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhh
Confidence 887773333344455555 67788888777 45577777777788777777777 445 567777788888888777754
Q ss_pred CcccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEeCCCC
Q 046340 497 IPSSFSSLRGMQNLDLSRNNLSGRIPKYFENFFFLQNLNLSSN 539 (715)
Q Consensus 497 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~ls~N 539 (715)
.-..-..-++|++||+++|.-....-..|..+..+...++.-|
T Consensus 468 ~l~~~~p~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 468 TLPEALPSPNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred hhhhhCCCcccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 3222222367788888877643344455555555555555544
No 9
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=3e-33 Score=280.20 Aligned_cols=364 Identities=26% Similarity=0.382 Sum_probs=204.5
Q ss_pred CCCCCEEeCCCCCCC-ccCChhhcCCCCCcEEecCCCcCcccCCccccCCCCCCEEEccCCcCccCccccccCCCCCCEE
Q 046340 39 LSFLRVLDLKNNSFR-DEIPQEIGYLFRLQILALHNNTFGGQIPDNISHCVNLESLGLGVNELVGKVPGKLGSLSKLWIL 117 (715)
Q Consensus 39 l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 117 (715)
++.++-.|+++|.++ +..|....++++++.|.|...++. .+|+.++++.+|++|.+++|++.. .-+.+..++.|+.+
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~~-vhGELs~Lp~LRsv 83 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLIS-VHGELSDLPRLRSV 83 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhHh-hhhhhccchhhHHH
Confidence 444555555555555 335555556666666666555554 455555555556666666555542 23445555555555
Q ss_pred Eeecccccc-ccCccccCCCCCCEEEcccCcceecCCccccCCCCCCEEEeecccCcccCCccccCCCCCcEEEccCCcc
Q 046340 118 SVHYNSLSG-EIPSSFGNLSSLEFLSAAANQFVGQFPETLSELKMMRYISFGENKLSGEIPFSIYNLSSLTHFYFPFNQL 196 (715)
Q Consensus 118 ~Ls~n~l~~-~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~i 196 (715)
++..|++.. -+|..+-.+..|..|+|++|++. ..|..+..-+++-.|+|++|+|..++...|.+++.|-.|+|++|++
T Consensus 84 ~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrL 162 (1255)
T KOG0444|consen 84 IVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRL 162 (1255)
T ss_pred hhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchh
Confidence 555555431 23444445555566666666554 3344455555555666666666544444555666666666666666
Q ss_pred ceecCcchhcCCCCCCEEEeeCccccccCCccccCCCCCCEEEeecccce--eccccccCcCCCcEEEcccCCCCCCCCC
Q 046340 197 QGSLPSDLGFTLPNLEVLNVGGNQFTGPIPASISNASNLMRLTIAKNGFS--GRVPSLENLYKLQWVSISHNHLGNYGEK 274 (715)
Q Consensus 197 ~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~L~~n~~~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 274 (715)
. .+|..+. .+..|++|+|++|.+.......+..++.|+.|.+++.+-+ .+++.+..+.+|..+++++|++..++
T Consensus 163 e-~LPPQ~R-RL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp~vP-- 238 (1255)
T KOG0444|consen 163 E-MLPPQIR-RLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLPIVP-- 238 (1255)
T ss_pred h-hcCHHHH-HHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCCcch--
Confidence 5 5666555 5666777777777665444444555666666777665543 23334666667777777777665432
Q ss_pred CccccccccccCCCCCEEEccCCcccccCChhHhhccccCcEEEccccceeecCCccccCCCCCCEEEcCCceeeee-cC
Q 046340 275 DNLEFVNSLVNASRLELLEISDNNFGGMLPEAVGNLSTRLRKLIVGNNQLFGNIPSGLRNLVNLELLHLGGNQFTGQ-IP 353 (715)
Q Consensus 275 ~~~~~~~~l~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~-~~ 353 (715)
..+-.+++|+.|+||+|.|+.. ....... .+|++|+++.|.++ ..|+++..+++|+.|.+.+|+++-. +|
T Consensus 239 ------ecly~l~~LrrLNLS~N~iteL-~~~~~~W-~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiP 309 (1255)
T KOG0444|consen 239 ------ECLYKLRNLRRLNLSGNKITEL-NMTEGEW-ENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIP 309 (1255)
T ss_pred ------HHHhhhhhhheeccCcCceeee-eccHHHH-hhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCc
Confidence 2344556666666666666532 2222222 23566666666665 4555566666666666666655422 34
Q ss_pred ccccCCCCccEEEccCCcccccCCccccCCCCCCeEeccCCcccccCCcccccCCCCCEEeCcCccc
Q 046340 354 GSIGDLHKLQWLMLPANEFWGEIPSSIGNLTSLAILAFDENMLEGSIPSSLGKCQNLILLDLSNNNL 420 (715)
Q Consensus 354 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~L~~n~l 420 (715)
..++.+.+|+.+..++|.+ ...|+.++.|..|+.|.++.|++. ..|+++.-++.|+.||+.+|.-
T Consensus 310 SGIGKL~~Levf~aanN~L-ElVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpn 374 (1255)
T KOG0444|consen 310 SGIGKLIQLEVFHAANNKL-ELVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPN 374 (1255)
T ss_pred cchhhhhhhHHHHhhcccc-ccCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcC
Confidence 5555566666666655555 455556666666666666666655 4555555556666666665543
No 10
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=4.1e-33 Score=279.29 Aligned_cols=370 Identities=26% Similarity=0.387 Sum_probs=248.4
Q ss_pred CCCCcEEecCCCcCcc-cCCccccCCCCCCEEEccCCcCccCccccccCCCCCCEEEeeccccccccCccccCCCCCCEE
Q 046340 63 LFRLQILALHNNTFGG-QIPDNISHCVNLESLGLGVNELVGKVPGKLGSLSKLWILSVHYNSLSGEIPSSFGNLSSLEFL 141 (715)
Q Consensus 63 l~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 141 (715)
++-.+-.|+++|.+++ .-|.....+++++-|.|...++. ..|+.++.+.+|++|.+++|++. .+...+..++.|+.+
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv 83 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSV 83 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHH
Confidence 4456777888888884 45778888888888888888775 67888888888888888888887 455678888888888
Q ss_pred EcccCcce-ecCCccccCCCCCCEEEeecccCcccCCccccCCCCCcEEEccCCccceecCcchhcCCCCCCEEEeeCcc
Q 046340 142 SAAANQFV-GQFPETLSELKMMRYISFGENKLSGEIPFSIYNLSSLTHFYFPFNQLQGSLPSDLGFTLPNLEVLNVGGNQ 220 (715)
Q Consensus 142 ~l~~n~~~-~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~L~~n~ 220 (715)
.+..|.+. +-+|..+..+..|+.|+|++|+++ ..|..+...+++-.|+|++|+|. .+|..++.++..|-.|||++|+
T Consensus 84 ~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~Nr 161 (1255)
T KOG0444|consen 84 IVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNR 161 (1255)
T ss_pred hhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccch
Confidence 88888774 234555667888888888888888 45777888888888888888887 8888888788888888888888
Q ss_pred ccccCCccccCCCCCCEEEeecccceecccc-ccCcCCCcEEEcccCCCCCCCCCCccccccccccCCCCCEEEccCCcc
Q 046340 221 FTGPIPASISNASNLMRLTIAKNGFSGRVPS-LENLYKLQWVSISHNHLGNYGEKDNLEFVNSLVNASRLELLEISDNNF 299 (715)
Q Consensus 221 l~~~~~~~l~~~~~L~~L~L~~n~~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~l~~~~~L~~L~ls~n~i 299 (715)
+. ..|..+..+.+|++|+|++|.+....-. +-.+.+|+.|.+++.+-+- ..++.++..+.+|..+|+|.|++
T Consensus 162 Le-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl------~N~Ptsld~l~NL~dvDlS~N~L 234 (1255)
T KOG0444|consen 162 LE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTL------DNIPTSLDDLHNLRDVDLSENNL 234 (1255)
T ss_pred hh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchh------hcCCCchhhhhhhhhccccccCC
Confidence 87 4555677777888888888877543222 4445555666665543221 12334455566666666666666
Q ss_pred cccCChhHhhccccCcEEEccccceeecCCccccCCCCCCEEEcCCceeeeecCccccCCCCccEEEccCCccc-ccCCc
Q 046340 300 GGMLPEAVGNLSTRLRKLIVGNNQLFGNIPSGLRNLVNLELLHLGGNQFTGQIPGSIGDLHKLQWLMLPANEFW-GEIPS 378 (715)
Q Consensus 300 ~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~-~~~~~ 378 (715)
. ..|+.+..+.+ |+.|+|++|.|+.. ....+...+|++|+|++|+++ ..|++++.+++|+.|.+.+|.++ +.+|.
T Consensus 235 p-~vPecly~l~~-LrrLNLS~N~iteL-~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPS 310 (1255)
T KOG0444|consen 235 P-IVPECLYKLRN-LRRLNLSGNKITEL-NMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPS 310 (1255)
T ss_pred C-cchHHHhhhhh-hheeccCcCceeee-eccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCcc
Confidence 5 55666666644 66666666666532 222344456666666666666 55666666666666666666553 23455
Q ss_pred cccCCCCCCeEeccCCcccccCCcccccCCCCCEEeCcCcccccccCccccccccccceEEccCCcccccCC
Q 046340 379 SIGNLTSLAILAFDENMLEGSIPSSLGKCQNLILLDLSNNNLSGTIPTEVIGLSSLSIYLDLSQNQLNGSLP 450 (715)
Q Consensus 379 ~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~L~Ls~n~i~~~~~ 450 (715)
.++.+.+|+++..++|.+. ..|+.+..|..|+.|.|+.|++. ..|+.+.-++.+ ..||+..|+--...|
T Consensus 311 GIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l-~vLDlreNpnLVMPP 379 (1255)
T KOG0444|consen 311 GIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDL-KVLDLRENPNLVMPP 379 (1255)
T ss_pred chhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCc-ceeeccCCcCccCCC
Confidence 5666666666666666655 55666666666666666666665 455555555555 556666655443333
No 11
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.95 E-value=5.3e-30 Score=244.20 Aligned_cols=289 Identities=21% Similarity=0.216 Sum_probs=228.1
Q ss_pred CcccceeeCCC--CCCeEEEEcCCCCCCcccCccccCCCCCCEEeCCCCCCCccCChhhcCCCCCcEEecCC-CcCcccC
Q 046340 4 CQWKGVTCSPR--HQRVTGLRLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRDEIPQEIGYLFRLQILALHN-NTFGGQI 80 (715)
Q Consensus 4 c~~~~~~~~~~--~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~-n~i~~~~ 80 (715)
|+..|++-+|. |...+.|+|..|.|+...+.+|+.+++||.||||+|+|+.+.|++|.++++|..|.+-+ |+|+.+.
T Consensus 53 Cr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~ 132 (498)
T KOG4237|consen 53 CRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLP 132 (498)
T ss_pred ccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhh
Confidence 66677777776 68999999999999999999999999999999999999999999999999998887776 9999888
Q ss_pred CccccCCCCCCEEEccCCcCccCccccccCCCCCCEEEeeccccccccCccccCCCCCCEEEcccCcce-----------
Q 046340 81 PDNISHCVNLESLGLGVNELVGKVPGKLGSLSKLWILSVHYNSLSGEIPSSFGNLSSLEFLSAAANQFV----------- 149 (715)
Q Consensus 81 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~----------- 149 (715)
.++|+++..|+.|.+..|++.-+..++|..+++|..|.+..|.+..+-..+|..+..++.+.+..|.+.
T Consensus 133 k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~ 212 (498)
T KOG4237|consen 133 KGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADD 212 (498)
T ss_pred hhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhH
Confidence 889999999999999999999999999999999999999999998555558999999999999988732
Q ss_pred -ecCCccccCCCCCCEEEeecccCcccCCccccCC-CCCcEEEccCCccceecCcchhcCCCCCCEEEeeCccccccCCc
Q 046340 150 -GQFPETLSELKMMRYISFGENKLSGEIPFSIYNL-SSLTHFYFPFNQLQGSLPSDLGFTLPNLEVLNVGGNQFTGPIPA 227 (715)
Q Consensus 150 -~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l-~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 227 (715)
...+..+++.....-..+.+.++..+.+..|... ..+.+--.+.+...+..|...|..+++|++|+|++|+++.+.+.
T Consensus 213 ~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~ 292 (498)
T KOG4237|consen 213 LAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDG 292 (498)
T ss_pred HhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhh
Confidence 1223344555555555555666655544443322 22222222333344577888888899999999999999988888
Q ss_pred cccCCCCCCEEEeecccceecccc-ccCcCCCcEEEcccCCCCCCCCCCccccccccccCCCCCEEEccCCcc
Q 046340 228 SISNASNLMRLTIAKNGFSGRVPS-LENLYKLQWVSISHNHLGNYGEKDNLEFVNSLVNASRLELLEISDNNF 299 (715)
Q Consensus 228 ~l~~~~~L~~L~L~~n~~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~l~~~~~L~~L~ls~n~i 299 (715)
+|.+...+++|.|..|.+..+... |.++..|+.|++++|+++.+.. .+|....+|.+|++-.|.+
T Consensus 293 aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~-------~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 293 AFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAP-------GAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred hhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEec-------ccccccceeeeeehccCcc
Confidence 999999999999999988765544 8888888888888888876432 3566667777777776654
No 12
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.94 E-value=4.4e-29 Score=238.02 Aligned_cols=401 Identities=21% Similarity=0.199 Sum_probs=217.2
Q ss_pred CCEEEeeccccccccCccccCCCCCCEEEcccCcceecCCccccCCCCCCEEEeec-ccCcccCCccccCCCCCcEEEcc
Q 046340 114 LWILSVHYNSLSGEIPSSFGNLSSLEFLSAAANQFVGQFPETLSELKMMRYISFGE-NKLSGEIPFSIYNLSSLTHFYFP 192 (715)
Q Consensus 114 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~-n~i~~~~~~~l~~l~~L~~L~l~ 192 (715)
-..++|..|+|+.+.+.+|..+++|++|+|++|.|+.+.|++|.++++|..|-+.+ |+|+.+....|+++..++.|.+.
T Consensus 69 tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllN 148 (498)
T KOG4237|consen 69 TVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLN 148 (498)
T ss_pred ceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcC
Confidence 34555555555555555555555555666655555555555665555554443333 55665555556666666666666
Q ss_pred CCccceecCcchhcCCCCCCEEEeeCccccccCCccccCCCCCCEEEeecccceeccccccCcCCCcEEEcccCCCCCCC
Q 046340 193 FNQLQGSLPSDLGFTLPNLEVLNVGGNQFTGPIPASISNASNLMRLTIAKNGFSGRVPSLENLYKLQWVSISHNHLGNYG 272 (715)
Q Consensus 193 ~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~L~~n~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 272 (715)
-|++. .++...+..++++..|.+.+|.+..+....|..+..++++.+..|.+... .+++.+.. ++..+.+
T Consensus 149 an~i~-Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icd----CnL~wla~-~~a~~~i---- 218 (498)
T KOG4237|consen 149 ANHIN-CIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICD----CNLPWLAD-DLAMNPI---- 218 (498)
T ss_pred hhhhc-chhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccc----cccchhhh-HHhhchh----
Confidence 66665 55555555666666666666666654444666666666666666654321 11111110 0000000
Q ss_pred CCCccccccccccCCCCCEEEccCCcccccCChhHhhccccCcEEEccccceeecCC-ccccCCCCCCEEEcCCceeeee
Q 046340 273 EKDNLEFVNSLVNASRLELLEISDNNFGGMLPEAVGNLSTRLRKLIVGNNQLFGNIP-SGLRNLVNLELLHLGGNQFTGQ 351 (715)
Q Consensus 273 ~~~~~~~~~~l~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~-~~~~~l~~L~~L~L~~n~i~~~ 351 (715)
.++...-..-..+.+.++..+.+..|......+..-..+.+...+..| ..|.++++|++|+|++|+++.+
T Consensus 219 ---------etsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i 289 (498)
T KOG4237|consen 219 ---------ETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRI 289 (498)
T ss_pred ---------hcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchh
Confidence 111112222222233333322222222221112111122222222222 3467777777777777777777
Q ss_pred cCccccCCCCccEEEccCCcccccCCccccCCCCCCeEeccCCcccccCCcccccCCCCCEEeCcCccccccc-Ccc---
Q 046340 352 IPGSIGDLHKLQWLMLPANEFWGEIPSSIGNLTSLAILAFDENMLEGSIPSSLGKCQNLILLDLSNNNLSGTI-PTE--- 427 (715)
Q Consensus 352 ~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~-~~~--- 427 (715)
.+++|.++.++++|.|..|++......+|.++.+|+.|++.+|+|+...|.+|....+|..|+|-.|.+--.. -.+
T Consensus 290 ~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~ 369 (498)
T KOG4237|consen 290 EDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGE 369 (498)
T ss_pred hhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHH
Confidence 7777777777777777777776666667777777777777777777777777777777777777776654100 000
Q ss_pred -----------ccccccccceEEccCCccccc---CCcC---------CcCCCCCCceeccCCcCccccChhhhcCcccc
Q 046340 428 -----------VIGLSSLSIYLDLSQNQLNGS---LPPN---------FGILKNLGGIDISENKLSGEIPNSLGSCIRLE 484 (715)
Q Consensus 428 -----------~~~~~~l~~~L~Ls~n~i~~~---~~~~---------~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 484 (715)
-++-+..++.+.++++.+... .|+. -..++-+....=-.|+.....|..+. ....
T Consensus 370 Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk~lp~~iP--~d~t 447 (498)
T KOG4237|consen 370 WLRKKSVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLKLLPRGIP--VDVT 447 (498)
T ss_pred HHhhCCCCCCCCCCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchhhcCCCCC--chhH
Confidence 011122223455555444321 1110 01111121111111111112232221 2456
Q ss_pred cccccCCcccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEeCCCC
Q 046340 485 ELVMKGNFFQGNIPSSFSSLRGMQNLDLSRNNLSGRIPKYFENFFFLQNLNLSSN 539 (715)
Q Consensus 485 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~ls~N 539 (715)
+|++.+|.++. +|+. .+.+| .+|+++|++.......|.++++|.+|-+++|
T Consensus 448 elyl~gn~~~~-vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 448 ELYLDGNAITS-VPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred HHhcccchhcc-cCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 89999999984 4444 56677 8999999999888889999999999998876
No 13
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=1.1e-22 Score=239.88 Aligned_cols=313 Identities=20% Similarity=0.213 Sum_probs=128.5
Q ss_pred CCEEEccCCcCccCccccccCCCCCCEEEeeccccccccCccccCCCCCCEEEcccCcceecCCccccCCCCCCEEEeec
Q 046340 90 LESLGLGVNELVGKVPGKLGSLSKLWILSVHYNSLSGEIPSSFGNLSSLEFLSAAANQFVGQFPETLSELKMMRYISFGE 169 (715)
Q Consensus 90 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~ 169 (715)
|+.|++.++.+. ..|..| ...+|+.|++++|++. .++..+..+++|+.|+++++......|. +..+++|+.|++++
T Consensus 591 Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~ 666 (1153)
T PLN03210 591 LRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSD 666 (1153)
T ss_pred cEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecC
Confidence 444444444443 233333 2344444444444444 2333444444444444444332222221 34444455555544
Q ss_pred ccCcccCCccccCCCCCcEEEccCCccceecCcchhcCCCCCCEEEeeCccccccCCccccCCCCCCEEEeecccceecc
Q 046340 170 NKLSGEIPFSIYNLSSLTHFYFPFNQLQGSLPSDLGFTLPNLEVLNVGGNQFTGPIPASISNASNLMRLTIAKNGFSGRV 249 (715)
Q Consensus 170 n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~L~~n~~~~~~ 249 (715)
|......|..+..+++|+.|++++|..-..+|... .+++|+.|++++|......|.. ..+|+.|++++|.+...+
T Consensus 667 c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i--~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~~lP 741 (1153)
T PLN03210 667 CSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI--NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIEEFP 741 (1153)
T ss_pred CCCccccchhhhccCCCCEEeCCCCCCcCccCCcC--CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCcccccc
Confidence 44333444444455555555555432222344332 3445555555554332222211 234455555555443322
Q ss_pred ccccCcCCCcEEEcccCCCCCCCCCCccccccccccCCCCCEEEccCCcccccCChhHhhccccCcEEEccccceeecCC
Q 046340 250 PSLENLYKLQWVSISHNHLGNYGEKDNLEFVNSLVNASRLELLEISDNNFGGMLPEAVGNLSTRLRKLIVGNNQLFGNIP 329 (715)
Q Consensus 250 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~l~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~ 329 (715)
....+++|+.|.+..+....+......-.......+++|+.|++++|.....+|..+..++. |+.|++++|...+.+|
T Consensus 742 -~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~-L~~L~Ls~C~~L~~LP 819 (1153)
T PLN03210 742 -SNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHK-LEHLEIENCINLETLP 819 (1153)
T ss_pred -ccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCC-CCEEECCCCCCcCeeC
Confidence 11134444444444322111000000000000112344555555555444444544444432 5555555543222333
Q ss_pred ccccCCCCCCEEEcCCceeeeecCccccCCCCccEEEccCCcccccCCccccCCCCCCeEeccCCcccccCCcccccCCC
Q 046340 330 SGLRNLVNLELLHLGGNQFTGQIPGSIGDLHKLQWLMLPANEFWGEIPSSIGNLTSLAILAFDENMLEGSIPSSLGKCQN 409 (715)
Q Consensus 330 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~ 409 (715)
..+ ++++|+.|++++|......|.. .++|++|+|++|.+. .+|..+..+++|+.|++++|+-...+|..+..+++
T Consensus 820 ~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~ 894 (1153)
T PLN03210 820 TGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKH 894 (1153)
T ss_pred CCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccC
Confidence 332 4455555555554322222211 234555555555543 23444445555555555553332233434444455
Q ss_pred CCEEeCcCc
Q 046340 410 LILLDLSNN 418 (715)
Q Consensus 410 L~~L~L~~n 418 (715)
|+.+++++|
T Consensus 895 L~~L~l~~C 903 (1153)
T PLN03210 895 LETVDFSDC 903 (1153)
T ss_pred CCeeecCCC
Confidence 555555544
No 14
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.89 E-value=7.9e-22 Score=232.78 Aligned_cols=126 Identities=25% Similarity=0.289 Sum_probs=57.2
Q ss_pred CCCCeEeccCCcccccCCcccccCCCCCEEeCcCcccccccCccccccccccceEEccCCcccccCCcCCcCCCCCCcee
Q 046340 384 TSLAILAFDENMLEGSIPSSLGKCQNLILLDLSNNNLSGTIPTEVIGLSSLSIYLDLSQNQLNGSLPPNFGILKNLGGID 463 (715)
Q Consensus 384 ~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 463 (715)
++|+.|++++|.....+|..+.++++|+.|++++|...+.+|... .++++ +.|++++|......|.. ..+|+.|+
T Consensus 778 ~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL-~~L~Ls~c~~L~~~p~~---~~nL~~L~ 852 (1153)
T PLN03210 778 PSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESL-ESLDLSGCSRLRTFPDI---STNISDLN 852 (1153)
T ss_pred ccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-Ccccc-CEEECCCCCcccccccc---ccccCEeE
Confidence 445555555554444444445555555555555443222333332 33333 44555544332222221 23455555
Q ss_pred ccCCcCccccChhhhcCcccccccccCCcccccCcccCCCCCCCCEEeCCCC
Q 046340 464 ISENKLSGEIPNSLGSCIRLEELVMKGNFFQGNIPSSFSSLRGMQNLDLSRN 515 (715)
Q Consensus 464 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 515 (715)
|++|.+. ..|..+..+++|+.|++++|.--..+|..+..+++|+.+++++|
T Consensus 853 Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 853 LSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred CCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCC
Confidence 5555554 34444555555555555553222233444445555555555554
No 15
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.84 E-value=3e-20 Score=202.97 Aligned_cols=263 Identities=25% Similarity=0.292 Sum_probs=127.2
Q ss_pred CCEEeCCCCCCCccCChhhcCCCCCcEEecCCCcCcccCCccccCCCCCCEEEccCCcCccCccccccCCCCCCEEEeec
Q 046340 42 LRVLDLKNNSFRDEIPQEIGYLFRLQILALHNNTFGGQIPDNISHCVNLESLGLGVNELVGKVPGKLGSLSKLWILSVHY 121 (715)
Q Consensus 42 L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 121 (715)
-..|||++++++. +|+.+. ++|+.|++++|+++. +|. .+++|++|++++|+++.+ |.. .++|+.|++++
T Consensus 203 ~~~LdLs~~~Lts-LP~~l~--~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~LtsL-P~l---p~sL~~L~Ls~ 271 (788)
T PRK15387 203 NAVLNVGESGLTT-LPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTSL-PVL---PPGLLELSIFS 271 (788)
T ss_pred CcEEEcCCCCCCc-CCcchh--cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccCcc-cCc---ccccceeeccC
Confidence 3455555555552 333332 245555555555552 232 134555555555555532 221 23555555555
Q ss_pred cccccccCccccCCCCCCEEEcccCcceecCCccccCCCCCCEEEeecccCcccCCccccCCCCCcEEEccCCccceecC
Q 046340 122 NSLSGEIPSSFGNLSSLEFLSAAANQFVGQFPETLSELKMMRYISFGENKLSGEIPFSIYNLSSLTHFYFPFNQLQGSLP 201 (715)
Q Consensus 122 n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~ 201 (715)
|.++ .+|..+ ++|+.|++++|+++.+. . .+++|+.|++++|++++. |.. ..+|+.|++++|+++ .+|
T Consensus 272 N~L~-~Lp~lp---~~L~~L~Ls~N~Lt~LP-~---~p~~L~~LdLS~N~L~~L-p~l---p~~L~~L~Ls~N~L~-~LP 338 (788)
T PRK15387 272 NPLT-HLPALP---SGLCKLWIFGNQLTSLP-V---LPPGLQELSVSDNQLASL-PAL---PSELCKLWAYNNQLT-SLP 338 (788)
T ss_pred Cchh-hhhhch---hhcCEEECcCCcccccc-c---cccccceeECCCCccccC-CCC---cccccccccccCccc-ccc
Confidence 5554 223221 34555555555554322 1 124455555555555532 211 123444455555554 333
Q ss_pred cchhcCCCCCCEEEeeCccccccCCccccCCCCCCEEEeecccceeccccccCcCCCcEEEcccCCCCCCCCCCcccccc
Q 046340 202 SDLGFTLPNLEVLNVGGNQFTGPIPASISNASNLMRLTIAKNGFSGRVPSLENLYKLQWVSISHNHLGNYGEKDNLEFVN 281 (715)
Q Consensus 202 ~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~L~~n~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~ 281 (715)
. ..++|+.|++++|++++ +|.. .+ +|+.|++++|.++.++.
T Consensus 339 ~----lp~~Lq~LdLS~N~Ls~-LP~l---p~-----------------------~L~~L~Ls~N~L~~LP~-------- 379 (788)
T PRK15387 339 T----LPSGLQELSVSDNQLAS-LPTL---PS-----------------------ELYKLWAYNNRLTSLPA-------- 379 (788)
T ss_pred c----cccccceEecCCCccCC-CCCC---Cc-----------------------ccceehhhccccccCcc--------
Confidence 2 11244555555554442 1211 12 34444444444443221
Q ss_pred ccccCCCCCEEEccCCcccccCChhHhhccccCcEEEccccceeecCCccccCCCCCCEEEcCCceeeeecCccccCCCC
Q 046340 282 SLVNASRLELLEISDNNFGGMLPEAVGNLSTRLRKLIVGNNQLFGNIPSGLRNLVNLELLHLGGNQFTGQIPGSIGDLHK 361 (715)
Q Consensus 282 ~l~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~ 361 (715)
...+|+.|++++|.+++ +|.. ++.|+.|++++|.++. +|.. ..+|+.|++++|+++ .+|..+..+++
T Consensus 380 ---l~~~L~~LdLs~N~Lt~-LP~l----~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~ 446 (788)
T PRK15387 380 ---LPSGLKELIVSGNRLTS-LPVL----PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSS 446 (788)
T ss_pred ---cccccceEEecCCcccC-CCCc----ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccC
Confidence 01345556666665553 2221 2346666666666654 3332 235666777777776 45666777777
Q ss_pred ccEEEccCCcccccCCccc
Q 046340 362 LQWLMLPANEFWGEIPSSI 380 (715)
Q Consensus 362 L~~L~L~~n~i~~~~~~~~ 380 (715)
|+.|+|++|.+++..+..+
T Consensus 447 L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 447 ETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred CCeEECCCCCCCchHHHHH
Confidence 7777777777766555444
No 16
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.84 E-value=3.4e-20 Score=202.54 Aligned_cols=263 Identities=27% Similarity=0.311 Sum_probs=151.1
Q ss_pred CCEEEeeCccccccCCccccCCCCCCEEEeecccceeccccccCcCCCcEEEcccCCCCCCCCCCccccccccccCCCCC
Q 046340 211 LEVLNVGGNQFTGPIPASISNASNLMRLTIAKNGFSGRVPSLENLYKLQWVSISHNHLGNYGEKDNLEFVNSLVNASRLE 290 (715)
Q Consensus 211 L~~L~L~~n~l~~~~~~~l~~~~~L~~L~L~~n~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~l~~~~~L~ 290 (715)
-..|+++.+.++ .+|..+. ++|+.|++.+|.++..+. ..++|++|++++|+++.++. ..++|+
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~LP~---lp~~Lk~LdLs~N~LtsLP~-----------lp~sL~ 265 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA---LPPELRTLEVSGNQLTSLPV-----------LPPGLL 265 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCCCCC---CCCCCcEEEecCCccCcccC-----------cccccc
Confidence 344555555554 2333332 245555555555543221 13456666666666654331 124566
Q ss_pred EEEccCCcccccCChhHhhccccCcEEEccccceeecCCccccCCCCCCEEEcCCceeeeecCccccCCCCccEEEccCC
Q 046340 291 LLEISDNNFGGMLPEAVGNLSTRLRKLIVGNNQLFGNIPSGLRNLVNLELLHLGGNQFTGQIPGSIGDLHKLQWLMLPAN 370 (715)
Q Consensus 291 ~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 370 (715)
.|++++|.+.. +|. .+..|+.|++++|+++. +|. ..++|+.|++++|+++++ |.. ..+|+.|++++|
T Consensus 266 ~L~Ls~N~L~~-Lp~----lp~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~L-p~l---p~~L~~L~Ls~N 332 (788)
T PRK15387 266 ELSIFSNPLTH-LPA----LPSGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLASL-PAL---PSELCKLWAYNN 332 (788)
T ss_pred eeeccCCchhh-hhh----chhhcCEEECcCCcccc-ccc---cccccceeECCCCccccC-CCC---cccccccccccC
Confidence 66666666652 222 23446777777777664 232 235677777777777643 221 235666777777
Q ss_pred cccccCCccccCCCCCCeEeccCCcccccCCcccccCCCCCEEeCcCcccccccCccccccccccceEEccCCcccccCC
Q 046340 371 EFWGEIPSSIGNLTSLAILAFDENMLEGSIPSSLGKCQNLILLDLSNNNLSGTIPTEVIGLSSLSIYLDLSQNQLNGSLP 450 (715)
Q Consensus 371 ~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~L~Ls~n~i~~~~~ 450 (715)
.+++ +|. ...+|+.|++++|++++. |.. .++|+.|++++|++. .+|... ..+ +.|++++|+++. .|
T Consensus 333 ~L~~-LP~---lp~~Lq~LdLS~N~Ls~L-P~l---p~~L~~L~Ls~N~L~-~LP~l~---~~L-~~LdLs~N~Lt~-LP 398 (788)
T PRK15387 333 QLTS-LPT---LPSGLQELSVSDNQLASL-PTL---PSELYKLWAYNNRLT-SLPALP---SGL-KELIVSGNRLTS-LP 398 (788)
T ss_pred cccc-ccc---cccccceEecCCCccCCC-CCC---Ccccceehhhccccc-cCcccc---ccc-ceEEecCCcccC-CC
Confidence 7754 232 124677777777777743 322 246677777777776 345332 233 667777777774 33
Q ss_pred cCCcCCCCCCceeccCCcCccccChhhhcCcccccccccCCcccccCcccCCCCCCCCEEeCCCCcccccCCccc
Q 046340 451 PNFGILKNLGGIDISENKLSGEIPNSLGSCIRLEELVMKGNFFQGNIPSSFSSLRGMQNLDLSRNNLSGRIPKYF 525 (715)
Q Consensus 451 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 525 (715)
.. .++|+.|++++|++++ +|.. ..+|+.|++++|+++ .+|..|.+++.|+.|+|++|++++..+..+
T Consensus 399 ~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 399 VL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred Cc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 22 2467777777777774 4432 245677777777777 556677777777788888887776655544
No 17
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.74 E-value=1e-17 Score=184.62 Aligned_cols=203 Identities=26% Similarity=0.416 Sum_probs=115.6
Q ss_pred CCeEEEEcCCCCCCcccCccccCCCCCCEEeCCCCCCCccCChhhcCCCCCcEEecCCCcCcccCCccccCCCCCCEEEc
Q 046340 16 QRVTGLRLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRDEIPQEIGYLFRLQILALHNNTFGGQIPDNISHCVNLESLGL 95 (715)
Q Consensus 16 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 95 (715)
.+.+.|++++++++. +|..+. ++++.|+|++|.|+.. |..+. ++|++|++++|+++ .+|..+. .+|+.|+|
T Consensus 178 ~~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~LtsL-P~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLTT-IPACIP--EQITTLILDNNELKSL-PENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCCcC-Chhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 466778887777764 344443 4677888888877743 43332 47788888877776 3454433 36777777
Q ss_pred cCCcCccCccccccCCCCCCEEEeeccccccccCccccCCCCCCEEEcccCcceecCCccccCCCCCCEEEeecccCccc
Q 046340 96 GVNELVGKVPGKLGSLSKLWILSVHYNSLSGEIPSSFGNLSSLEFLSAAANQFVGQFPETLSELKMMRYISFGENKLSGE 175 (715)
Q Consensus 96 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~i~~~ 175 (715)
++|++. .+|..+. .+|+.|++++|+++ .+|..+. ++|+.|++++|.++.+ |..+. ++|+.|++++|.++..
T Consensus 249 s~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~L-P~~lp--~sL~~L~Ls~N~Lt~L 319 (754)
T PRK15370 249 SINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRTL-PAHLP--SGITHLNVQSNSLTAL 319 (754)
T ss_pred cCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccccC-cccch--hhHHHHHhcCCccccC
Confidence 777776 3444443 46777777777776 3455443 4677777777776643 22221 3466666666666632
Q ss_pred CCccccCCCCCcEEEccCCccceecCcchhcCCCCCCEEEeeCccccccCCccccCCCCCCEEEeecccce
Q 046340 176 IPFSIYNLSSLTHFYFPFNQLQGSLPSDLGFTLPNLEVLNVGGNQFTGPIPASISNASNLMRLTIAKNGFS 246 (715)
Q Consensus 176 ~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~L~~n~~~ 246 (715)
|..+ .++|+.|++++|.++ .+|..+ .++|+.|++++|+++. +|..+ .++|+.|++++|.+.
T Consensus 320 -P~~l--~~sL~~L~Ls~N~Lt-~LP~~l---~~sL~~L~Ls~N~L~~-LP~~l--p~~L~~LdLs~N~Lt 380 (754)
T PRK15370 320 -PETL--PPGLKTLEAGENALT-SLPASL---PPELQVLDVSKNQITV-LPETL--PPTITTLDVSRNALT 380 (754)
T ss_pred -Cccc--cccceeccccCCccc-cCChhh---cCcccEEECCCCCCCc-CChhh--cCCcCEEECCCCcCC
Confidence 2222 245666666666655 344432 2455555555555542 33222 134444444444444
No 18
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.72 E-value=4.6e-17 Score=179.52 Aligned_cols=204 Identities=22% Similarity=0.355 Sum_probs=110.3
Q ss_pred CCCEEEccCCcccccCChhHhhccccCcEEEccccceeecCCccccCCCCCCEEEcCCceeeeecCccccCCCCccEEEc
Q 046340 288 RLELLEISDNNFGGMLPEAVGNLSTRLRKLIVGNNQLFGNIPSGLRNLVNLELLHLGGNQFTGQIPGSIGDLHKLQWLML 367 (715)
Q Consensus 288 ~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 367 (715)
+|+.|++++|.++. +|..+ +..|+.|++++|.+.. +|..+. ++|+.|++++|+++. +|..+. ++|+.|++
T Consensus 221 nL~~L~Ls~N~Lts-LP~~l---~~~L~~L~Ls~N~L~~-LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~L 290 (754)
T PRK15370 221 NIKTLYANSNQLTS-IPATL---PDTIQEMELSINRITE-LPERLP--SALQSLDLFHNKISC-LPENLP--EELRYLSV 290 (754)
T ss_pred CCCEEECCCCcccc-CChhh---hccccEEECcCCccCc-CChhHh--CCCCEEECcCCccCc-cccccC--CCCcEEEC
Confidence 45555555555542 23322 2235666666666552 333332 356666666666653 333322 35666666
Q ss_pred cCCcccccCCccccCCCCCCeEeccCCcccccCCcccccCCCCCEEeCcCcccccccCccccccccccceEEccCCcccc
Q 046340 368 PANEFWGEIPSSIGNLTSLAILAFDENMLEGSIPSSLGKCQNLILLDLSNNNLSGTIPTEVIGLSSLSIYLDLSQNQLNG 447 (715)
Q Consensus 368 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~L~Ls~n~i~~ 447 (715)
++|.++.. |..+. ++|+.|++++|.++.. |..+ .++|+.|++++|.++. +|..+. +++ +.|++++|+++.
T Consensus 291 s~N~Lt~L-P~~lp--~sL~~L~Ls~N~Lt~L-P~~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL-~~L~Ls~N~L~~ 360 (754)
T PRK15370 291 YDNSIRTL-PAHLP--SGITHLNVQSNSLTAL-PETL--PPGLKTLEAGENALTS-LPASLP--PEL-QVLDVSKNQITV 360 (754)
T ss_pred CCCccccC-cccch--hhHHHHHhcCCccccC-Cccc--cccceeccccCCcccc-CChhhc--Ccc-cEEECCCCCCCc
Confidence 66666432 22221 3566666666666633 3222 2466677777776663 444332 334 667777777663
Q ss_pred cCCcCCcCCCCCCceeccCCcCccccChhhhcCcccccccccCCcccccCcc----cCCCCCCCCEEeCCCCccc
Q 046340 448 SLPPNFGILKNLGGIDISENKLSGEIPNSLGSCIRLEELVMKGNFFQGNIPS----SFSSLRGMQNLDLSRNNLS 518 (715)
Q Consensus 448 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~----~~~~l~~L~~L~L~~N~l~ 518 (715)
+|..+. ++|+.|++++|.++. +|..+. .+|+.|++++|++.. +|. .+..++.+..|++.+|+++
T Consensus 361 -LP~~lp--~~L~~LdLs~N~Lt~-LP~~l~--~sL~~LdLs~N~L~~-LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 361 -LPETLP--PTITTLDVSRNALTN-LPENLP--AALQIMQASRNNLVR-LPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred -CChhhc--CCcCEEECCCCcCCC-CCHhHH--HHHHHHhhccCCccc-CchhHHHHhhcCCCccEEEeeCCCcc
Confidence 343332 467777777777763 344333 357777777777763 333 2334466677777777765
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.72 E-value=5.7e-19 Score=181.67 Aligned_cols=280 Identities=21% Similarity=0.275 Sum_probs=151.6
Q ss_pred EEEcCCCCCC-cccCccccCCCCCCEEeCCCCCCCcc----CChhhcCCCCCcEEecCCCcCcc------cCCccccCCC
Q 046340 20 GLRLPSLLLQ-GSLSPHIGNLSFLRVLDLKNNSFRDE----IPQEIGYLFRLQILALHNNTFGG------QIPDNISHCV 88 (715)
Q Consensus 20 ~l~l~~~~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~~----~~~~~~~l~~L~~L~Ls~n~i~~------~~~~~~~~l~ 88 (715)
.|+|..+.++ ..+...|..+++|++|+++++.+++. ++..+...+.|+.|+++++.+.. ..+..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4667777776 34566677777788888888877543 34445566778888888776652 1234456677
Q ss_pred CCCEEEccCCcCccCccccccCCCC---CCEEEeecccccc----ccCccccCC-CCCCEEEcccCcceec----CCccc
Q 046340 89 NLESLGLGVNELVGKVPGKLGSLSK---LWILSVHYNSLSG----EIPSSFGNL-SSLEFLSAAANQFVGQ----FPETL 156 (715)
Q Consensus 89 ~L~~L~L~~n~l~~~~~~~~~~l~~---L~~L~Ls~n~l~~----~~~~~~~~l-~~L~~L~l~~n~~~~~----~~~~l 156 (715)
+|+.|++++|.+.+..+..+..+.. |++|++++|+++. .+...+..+ ++|++|++++|.+++. ....+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 7777777777776555555544444 7777777776652 122334445 6666666666666522 12234
Q ss_pred cCCCCCCEEEeecccCccc----CCccccCCCCCcEEEccCCccceecCcchhcCCCCCCEEEeeCccccccCCccccCC
Q 046340 157 SELKMMRYISFGENKLSGE----IPFSIYNLSSLTHFYFPFNQLQGSLPSDLGFTLPNLEVLNVGGNQFTGPIPASISNA 232 (715)
Q Consensus 157 ~~l~~L~~L~L~~n~i~~~----~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~ 232 (715)
..++.|++|++++|.+++. .+..+..+++|+.|++++|.+.+..... ....+..+
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~---------------------l~~~~~~~ 220 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASA---------------------LAETLASL 220 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHH---------------------HHHHhccc
Confidence 4455566666666655531 1112233345555555555443211111 11233344
Q ss_pred CCCCEEEeecccceecccc-c-----cCcCCCcEEEcccCCCCCCCCCCccccccccccCCCCCEEEccCCcccccCC--
Q 046340 233 SNLMRLTIAKNGFSGRVPS-L-----ENLYKLQWVSISHNHLGNYGEKDNLEFVNSLVNASRLELLEISDNNFGGMLP-- 304 (715)
Q Consensus 233 ~~L~~L~L~~n~~~~~~~~-~-----~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~l~~~~~L~~L~ls~n~i~~~~~-- 304 (715)
++|++|++++|.+.+.... + ...+.|+.|++++|.++... ...+...+..+++|+.+++++|.+++...
T Consensus 221 ~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~---~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~ 297 (319)
T cd00116 221 KSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDG---AKDLAEVLAEKESLLELDLRGNKFGEEGAQL 297 (319)
T ss_pred CCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHH---HHHHHHHHhcCCCccEEECCCCCCcHHHHHH
Confidence 5555555555554431111 1 12356666666666654211 11223344455677777777777764422
Q ss_pred --hhHhhccccCcEEEccccc
Q 046340 305 --EAVGNLSTRLRKLIVGNNQ 323 (715)
Q Consensus 305 --~~~~~~~~~L~~L~l~~n~ 323 (715)
..+....+.++++++.+|.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 298 LAESLLEPGNELESLWVKDDS 318 (319)
T ss_pred HHHHHhhcCCchhhcccCCCC
Confidence 2223332457788877764
No 20
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.71 E-value=7.8e-19 Score=180.66 Aligned_cols=280 Identities=22% Similarity=0.269 Sum_probs=165.6
Q ss_pred EEeCCCCCCCc-cCChhhcCCCCCcEEecCCCcCccc----CCccccCCCCCCEEEccCCcCcc------CccccccCCC
Q 046340 44 VLDLKNNSFRD-EIPQEIGYLFRLQILALHNNTFGGQ----IPDNISHCVNLESLGLGVNELVG------KVPGKLGSLS 112 (715)
Q Consensus 44 ~L~Ls~n~i~~-~~~~~~~~l~~L~~L~Ls~n~i~~~----~~~~~~~l~~L~~L~L~~n~l~~------~~~~~~~~l~ 112 (715)
.|+|..+.+++ .....|..+.+|+.|+++++.++.. ++..+...++|++|+++++.+.+ ..+..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 47788888763 3455567788899999998887532 34445667778888888876652 1223455566
Q ss_pred CCCEEEeeccccccccCccccCCCC---CCEEEcccCcceecC----CccccCC-CCCCEEEeecccCcccCCccccCCC
Q 046340 113 KLWILSVHYNSLSGEIPSSFGNLSS---LEFLSAAANQFVGQF----PETLSEL-KMMRYISFGENKLSGEIPFSIYNLS 184 (715)
Q Consensus 113 ~L~~L~Ls~n~l~~~~~~~~~~l~~---L~~L~l~~n~~~~~~----~~~l~~l-~~L~~L~L~~n~i~~~~~~~l~~l~ 184 (715)
+|+.|++++|.+....+..+..+.+ |++|++++|.+.+.. ...+..+ ++|+.|++++|.+++....
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~------ 155 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCE------ 155 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHH------
Confidence 7777777776665444444433333 666666666554211 1122333 4455555555554421110
Q ss_pred CCcEEEccCCccceecCcchhcCCCCCCEEEeeCcccccc----CCccccCCCCCCEEEeecccceecc-----ccccCc
Q 046340 185 SLTHFYFPFNQLQGSLPSDLGFTLPNLEVLNVGGNQFTGP----IPASISNASNLMRLTIAKNGFSGRV-----PSLENL 255 (715)
Q Consensus 185 ~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~l~~~~~L~~L~L~~n~~~~~~-----~~~~~l 255 (715)
.++.. +..+++|++|++++|.+++. ++..+..+++|++|++++|.+.+.. ..+..+
T Consensus 156 --------------~~~~~-~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~ 220 (319)
T cd00116 156 --------------ALAKA-LRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASL 220 (319)
T ss_pred --------------HHHHH-HHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhccc
Confidence 01111 11345566666666655521 2223444567777777777765322 226678
Q ss_pred CCCcEEEcccCCCCCCCCCCcccccccc-ccCCCCCEEEccCCccccc----CChhHhhccccCcEEEccccceeec---
Q 046340 256 YKLQWVSISHNHLGNYGEKDNLEFVNSL-VNASRLELLEISDNNFGGM----LPEAVGNLSTRLRKLIVGNNQLFGN--- 327 (715)
Q Consensus 256 ~~L~~L~l~~n~l~~~~~~~~~~~~~~l-~~~~~L~~L~ls~n~i~~~----~~~~~~~~~~~L~~L~l~~n~i~~~--- 327 (715)
++|++|++++|.++..... .+...+ ...+.|+.|++++|.+++. +...+... +.|+.+++++|.+...
T Consensus 221 ~~L~~L~ls~n~l~~~~~~---~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~-~~L~~l~l~~N~l~~~~~~ 296 (319)
T cd00116 221 KSLEVLNLGDNNLTDAGAA---ALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEK-ESLLELDLRGNKFGEEGAQ 296 (319)
T ss_pred CCCCEEecCCCcCchHHHH---HHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcC-CCccEEECCCCCCcHHHHH
Confidence 8999999999987642110 111111 1347999999999998733 22333344 4599999999999855
Q ss_pred -CCccccCC-CCCCEEEcCCcee
Q 046340 328 -IPSGLRNL-VNLELLHLGGNQF 348 (715)
Q Consensus 328 -~~~~~~~l-~~L~~L~L~~n~i 348 (715)
....+... +.|+.|++.+|.+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 297 LLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHHHHHhhcCCchhhcccCCCCC
Confidence 23333444 6899999988764
No 21
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.67 E-value=1.2e-18 Score=147.65 Aligned_cols=164 Identities=30% Similarity=0.490 Sum_probs=118.1
Q ss_pred cccCCCCCCEEeCCCCCCCccCChhhcCCCCCcEEecCCCcCcccCCccccCCCCCCEEEccCCcCccCccccccCCCCC
Q 046340 35 HIGNLSFLRVLDLKNNSFRDEIPQEIGYLFRLQILALHNNTFGGQIPDNISHCVNLESLGLGVNELVGKVPGKLGSLSKL 114 (715)
Q Consensus 35 ~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 114 (715)
.+.++++++.|.||+|.++ .+|..++.+.+|++|++++|+|+ ..|..+..++.|+.|++.-|++. +.|..|+.++.|
T Consensus 28 gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~l 104 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPAL 104 (264)
T ss_pred cccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchh
Confidence 4456677778888888887 44556788888888888888887 56777788888888888877775 777778888888
Q ss_pred CEEEeecccccc-ccCccccCCCCCCEEEcccCcceecCCccccCCCCCCEEEeecccCcccCCccccCCCCCcEEEccC
Q 046340 115 WILSVHYNSLSG-EIPSSFGNLSSLEFLSAAANQFVGQFPETLSELKMMRYISFGENKLSGEIPFSIYNLSSLTHFYFPF 193 (715)
Q Consensus 115 ~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~ 193 (715)
+.|||.+|++.. .+|..|..++.|+.|+++.|.+. +.|...+++++|+.|.+.+|.+- ..|..++.++.|++|.+.+
T Consensus 105 evldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqg 182 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQG 182 (264)
T ss_pred hhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhccc
Confidence 888888877653 56666777777777777777775 45555677777777777777665 3466666777777777777
Q ss_pred CccceecCcch
Q 046340 194 NQLQGSLPSDL 204 (715)
Q Consensus 194 n~i~~~~~~~~ 204 (715)
|+++ .+|.++
T Consensus 183 nrl~-vlppel 192 (264)
T KOG0617|consen 183 NRLT-VLPPEL 192 (264)
T ss_pred ceee-ecChhh
Confidence 7666 555443
No 22
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.65 E-value=6.9e-18 Score=143.13 Aligned_cols=158 Identities=35% Similarity=0.566 Sum_probs=115.0
Q ss_pred ccCCCCCCEEEcCCceeeeecCccccCCCCccEEEccCCcccccCCccccCCCCCCeEeccCCcccccCCcccccCCCCC
Q 046340 332 LRNLVNLELLHLGGNQFTGQIPGSIGDLHKLQWLMLPANEFWGEIPSSIGNLTSLAILAFDENMLEGSIPSSLGKCQNLI 411 (715)
Q Consensus 332 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~ 411 (715)
+.+++.++.|.|++|+++ ..|..++.+.+|+.|++++|++ ...|..++.++.|+.|+++-|++. +.|..|+.+|.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqi-e~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQI-EELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchh-hhcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 345566777778888877 4555677778888888888887 455667777888888888877776 7777888888888
Q ss_pred EEeCcCccccc-ccCccccccccccceEEccCCcccccCCcCCcCCCCCCceeccCCcCccccChhhhcCcccccccccC
Q 046340 412 LLDLSNNNLSG-TIPTEVIGLSSLSIYLDLSQNQLNGSLPPNFGILKNLGGIDISENKLSGEIPNSLGSCIRLEELVMKG 490 (715)
Q Consensus 412 ~L~L~~n~l~~-~~~~~~~~~~~l~~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 490 (715)
.|||++|++.. ..|..|+.+..+ +-|+|++|.+. ..|..++.+++||.|.+.+|.+. ..|..++.++.|++|++.+
T Consensus 106 vldltynnl~e~~lpgnff~m~tl-ralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqg 182 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTL-RALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQG 182 (264)
T ss_pred hhhccccccccccCCcchhHHHHH-HHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhccc
Confidence 88888887763 456677777666 66777777777 56666777777777777777766 5566677777777777777
Q ss_pred Ccccc
Q 046340 491 NFFQG 495 (715)
Q Consensus 491 n~l~~ 495 (715)
|+++.
T Consensus 183 nrl~v 187 (264)
T KOG0617|consen 183 NRLTV 187 (264)
T ss_pred ceeee
Confidence 77763
No 23
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.45 E-value=1.5e-13 Score=140.56 Aligned_cols=81 Identities=42% Similarity=0.708 Sum_probs=72.2
Q ss_pred ccccchHHHHHHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEE
Q 046340 632 SVLRVSYQNLIKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKII 711 (715)
Q Consensus 632 ~~~~~~~~~~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~ 711 (715)
....|++++++.||++|+..+.||+|+||.||+|.+.++ . .||||++.....+..++|.+|++++++++|||+|+|+
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~-~--~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~Ll 137 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDG-T--VVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLL 137 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCC-C--EEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEE
Confidence 567799999999999999999999999999999999886 3 8999999765433155699999999999999999999
Q ss_pred EEeC
Q 046340 712 TSCA 715 (715)
Q Consensus 712 g~~~ 715 (715)
|||.
T Consensus 138 GyC~ 141 (361)
T KOG1187|consen 138 GYCL 141 (361)
T ss_pred EEEe
Confidence 9995
No 24
>PLN03150 hypothetical protein; Provisional
Probab=99.38 E-value=7.2e-13 Score=146.21 Aligned_cols=111 Identities=32% Similarity=0.598 Sum_probs=91.8
Q ss_pred CCCceeccCCcCccccChhhhcCcccccccccCCcccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEeCC
Q 046340 458 NLGGIDISENKLSGEIPNSLGSCIRLEELVMKGNFFQGNIPSSFSSLRGMQNLDLSRNNLSGRIPKYFENFFFLQNLNLS 537 (715)
Q Consensus 458 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~ls 537 (715)
.++.|+|++|.+.+..|..+..+++|+.|+|++|.+.+.+|..+..+++|+.|+|++|++++.+|+.++++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 36778888888888888888888888888888888888888888888888899999998888888888888889999999
Q ss_pred CCcccccCCCC--CCCCCCCccccCCCCCCCCc
Q 046340 538 SNHFEGEVPVK--GVFSNSSAISLDGNDNLCGG 568 (715)
Q Consensus 538 ~N~l~~~~~~~--~~~~~~~~~~~~~n~~~c~~ 568 (715)
+|.+.+.+|.. ....+...+++.+|+..|+.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~ 531 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGI 531 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCC
Confidence 99888887743 22334567788999999974
No 25
>PLN03150 hypothetical protein; Provisional
Probab=99.37 E-value=1.9e-12 Score=142.85 Aligned_cols=120 Identities=31% Similarity=0.527 Sum_probs=102.4
Q ss_pred cccceeeCCCC----CCeEEEEcCCCCCCcccCccccCCCCCCEEeCCCCCCCccCChhhcCCCCCcEEecCCCcCcccC
Q 046340 5 QWKGVTCSPRH----QRVTGLRLPSLLLQGSLSPHIGNLSFLRVLDLKNNSFRDEIPQEIGYLFRLQILALHNNTFGGQI 80 (715)
Q Consensus 5 ~~~~~~~~~~~----~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~ 80 (715)
.|.|+.|..+. ..|+.|+|+++++.+.+|..++.+++|+.|+|++|.+++.+|..++.+++|+.|+|++|++++.+
T Consensus 403 ~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~i 482 (623)
T PLN03150 403 PWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482 (623)
T ss_pred ccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCC
Confidence 79999996432 25899999999999999999999999999999999999888888999999999999999999888
Q ss_pred CccccCCCCCCEEEccCCcCccCccccccCC-CCCCEEEeecccc
Q 046340 81 PDNISHCVNLESLGLGVNELVGKVPGKLGSL-SKLWILSVHYNSL 124 (715)
Q Consensus 81 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l-~~L~~L~Ls~n~l 124 (715)
|+.++++++|++|+|++|.+.+..|..+..+ .++..+++.+|..
T Consensus 483 P~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~ 527 (623)
T PLN03150 483 PESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAG 527 (623)
T ss_pred chHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecCCcc
Confidence 9889999999999999998888888877653 4566777777753
No 26
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.22 E-value=7.3e-13 Score=133.75 Aligned_cols=193 Identities=30% Similarity=0.471 Sum_probs=117.7
Q ss_pred EEccccceeecCCccc-cCCCCCCEEEcCCceeeeecCccccCCCCccEEEccCCcccccCCccccCCCCCCeEeccCCc
Q 046340 317 LIVGNNQLFGNIPSGL-RNLVNLELLHLGGNQFTGQIPGSIGDLHKLQWLMLPANEFWGEIPSSIGNLTSLAILAFDENM 395 (715)
Q Consensus 317 L~l~~n~i~~~~~~~~-~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~ 395 (715)
|.|++-++......++ -.+..-...||+.|++. ..|..+..+..|+.+.+..|.+ -.+|..++++..|.+++++.|+
T Consensus 55 l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~-r~ip~~i~~L~~lt~l~ls~Nq 132 (722)
T KOG0532|consen 55 LLLSGRRLKEFPRGAASYDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCI-RTIPEAICNLEALTFLDLSSNQ 132 (722)
T ss_pred cccccchhhcCCCccccccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccc-eecchhhhhhhHHHHhhhccch
Confidence 4444444443322222 23444556777777776 5666677777777777777776 3556666777777777777777
Q ss_pred ccccCCcccccCCCCCEEeCcCcccccccCccccccccccceEEccCCcccccCCcCCcCCCCCCceeccCCcCccccCh
Q 046340 396 LEGSIPSSLGKCQNLILLDLSNNNLSGTIPTEVIGLSSLSIYLDLSQNQLNGSLPPNFGILKNLGGIDISENKLSGEIPN 475 (715)
Q Consensus 396 i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 475 (715)
+. ..|..+..++ |+.|-+++|+++ .+|..+.....+ ..||.+.|.+. ..|..+.++.+|+.|.+..|++. ..|.
T Consensus 133 lS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl-~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~ 206 (722)
T KOG0532|consen 133 LS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTL-AHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPE 206 (722)
T ss_pred hh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhH-HHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCH
Confidence 76 4444444444 666777777776 566666655555 56666666666 34555666666666666666666 3344
Q ss_pred hhhcCcccccccccCCcccccCcccCCCCCCCCEEeCCCCcccc
Q 046340 476 SLGSCIRLEELVMKGNFFQGNIPSSFSSLRGMQNLDLSRNNLSG 519 (715)
Q Consensus 476 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 519 (715)
.+. .-.|..|+++.|++. .+|..|.+|+.|++|-|.+|++..
T Consensus 207 El~-~LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqS 248 (722)
T KOG0532|consen 207 ELC-SLPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQS 248 (722)
T ss_pred HHh-CCceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCC
Confidence 444 234566666666666 566666666666666666666653
No 27
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.17 E-value=1.5e-11 Score=110.55 Aligned_cols=111 Identities=25% Similarity=0.292 Sum_probs=27.7
Q ss_pred cccCCCCCCEEeCCCCCCCccCChhhc-CCCCCcEEecCCCcCcccCCccccCCCCCCEEEccCCcCccCccccccCCCC
Q 046340 35 HIGNLSFLRVLDLKNNSFRDEIPQEIG-YLFRLQILALHNNTFGGQIPDNISHCVNLESLGLGVNELVGKVPGKLGSLSK 113 (715)
Q Consensus 35 ~~~~l~~L~~L~Ls~n~i~~~~~~~~~-~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 113 (715)
.+.+...+++|+|++|.|+.+. .++ .+.+|+.|+|++|+|+.. +.+..++.|++|++++|+|+.+.+.....+++
T Consensus 14 ~~~n~~~~~~L~L~~n~I~~Ie--~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~ 89 (175)
T PF14580_consen 14 QYNNPVKLRELNLRGNQISTIE--NLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSISEGLDKNLPN 89 (175)
T ss_dssp ------------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT
T ss_pred cccccccccccccccccccccc--chhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCccccchHHhCCc
Confidence 3445555666777777666432 243 356666666666666632 23555666666666666665443222234566
Q ss_pred CCEEEeecccccccc-CccccCCCCCCEEEcccCcce
Q 046340 114 LWILSVHYNSLSGEI-PSSFGNLSSLEFLSAAANQFV 149 (715)
Q Consensus 114 L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~l~~n~~~ 149 (715)
|++|++++|+|.... -..+..+++|++|++.+|.+.
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 666666666654211 123444555555555555554
No 28
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.17 E-value=2.8e-12 Score=125.64 Aligned_cols=163 Identities=21% Similarity=0.097 Sum_probs=94.5
Q ss_pred cCCCCCcEEecCCCcCcccCC-ccccCCCCCCEEEccCCcCccCcc--ccccCCCCCCEEEeeccccccccCc-cccCCC
Q 046340 61 GYLFRLQILALHNNTFGGQIP-DNISHCVNLESLGLGVNELVGKVP--GKLGSLSKLWILSVHYNSLSGEIPS-SFGNLS 136 (715)
Q Consensus 61 ~~l~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~--~~~~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~ 136 (715)
+++.+|+...|.++.+..... .....|++++.|||+.|-+....+ .-...+++|+.|+|+.|++...... .-..++
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 346777777777776652221 345667777777777776654333 2235677777778877776521111 112456
Q ss_pred CCCEEEcccCcceecC-CccccCCCCCCEEEeecccCcccCCccccCCCCCcEEEccCCccceecCcchhcCCCCCCEEE
Q 046340 137 SLEFLSAAANQFVGQF-PETLSELKMMRYISFGENKLSGEIPFSIYNLSSLTHFYFPFNQLQGSLPSDLGFTLPNLEVLN 215 (715)
Q Consensus 137 ~L~~L~l~~n~~~~~~-~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~ 215 (715)
.|++|.++.|.++.-. ...+..+|+|+.|+|..|............+..|++|+|++|.+.+.-.......+|.|+.|+
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 7777777777776321 223355677777777777433333344455666777777777665222112222466666666
Q ss_pred eeCccccc
Q 046340 216 VGGNQFTG 223 (715)
Q Consensus 216 L~~n~l~~ 223 (715)
++.+.+.+
T Consensus 278 ls~tgi~s 285 (505)
T KOG3207|consen 278 LSSTGIAS 285 (505)
T ss_pred ccccCcch
Confidence 66666654
No 29
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.14 E-value=1.7e-12 Score=131.16 Aligned_cols=192 Identities=27% Similarity=0.387 Sum_probs=155.0
Q ss_pred CcEEEccccceeecCCccccCCCCCCEEEcCCceeeeecCccccCCCCccEEEccCCcccccCCccccCCCCCCeEeccC
Q 046340 314 LRKLIVGNNQLFGNIPSGLRNLVNLELLHLGGNQFTGQIPGSIGDLHKLQWLMLPANEFWGEIPSSIGNLTSLAILAFDE 393 (715)
Q Consensus 314 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~ 393 (715)
....+++.|++. .+|..+..+..|+.+.|..|.+. .+|..+..+..|++|+++.|+++ ..|..++.|+ |+.|-+++
T Consensus 77 t~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sN 152 (722)
T KOG0532|consen 77 TVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSN 152 (722)
T ss_pred hhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEec
Confidence 567788999987 57777888889999999999998 77888999999999999999985 5566666665 88999999
Q ss_pred CcccccCCcccccCCCCCEEeCcCcccccccCccccccccccceEEccCCcccccCCcCCcCCCCCCceeccCCcCcccc
Q 046340 394 NMLEGSIPSSLGKCQNLILLDLSNNNLSGTIPTEVIGLSSLSIYLDLSQNQLNGSLPPNFGILKNLGGIDISENKLSGEI 473 (715)
Q Consensus 394 n~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 473 (715)
|+++ .+|..++..+.|..||.+.|.+. .+|..+.++.++ +.|.+..|++.. .|..+.. -.|..||+|.|+++ .+
T Consensus 153 Nkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~sl-r~l~vrRn~l~~-lp~El~~-LpLi~lDfScNkis-~i 226 (722)
T KOG0532|consen 153 NKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSL-RDLNVRRNHLED-LPEELCS-LPLIRLDFSCNKIS-YL 226 (722)
T ss_pred Cccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHH-HHHHHhhhhhhh-CCHHHhC-CceeeeecccCcee-ec
Confidence 9998 67777888899999999999998 778888899888 788999999984 4444553 35788999999998 77
Q ss_pred ChhhhcCcccccccccCCcccccCcccCC---CCCCCCEEeCCCCc
Q 046340 474 PNSLGSCIRLEELVMKGNFFQGNIPSSFS---SLRGMQNLDLSRNN 516 (715)
Q Consensus 474 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~---~l~~L~~L~L~~N~ 516 (715)
|-.|.+|+.|++|.|.+|.++ .+|..+. ...-.++|+..-+.
T Consensus 227 Pv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 227 PVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred chhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhcc
Confidence 888999999999999999998 4444332 22234677777663
No 30
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.14 E-value=7.9e-12 Score=116.30 Aligned_cols=133 Identities=30% Similarity=0.279 Sum_probs=98.4
Q ss_pred CCCCEEeCcCcccccccCccccccccccceEEccCCcccccCCcCCcCCCCCCceeccCCcCccccChhhhcCccccccc
Q 046340 408 QNLILLDLSNNNLSGTIPTEVIGLSSLSIYLDLSQNQLNGSLPPNFGILKNLGGIDISENKLSGEIPNSLGSCIRLEELV 487 (715)
Q Consensus 408 ~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 487 (715)
..|+++|||+|.|+ .+...+.-.+.+ +.|++|+|.|.... .+..+++|+.||||+|.++ .+.++-..+.+++.|.
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pki-r~L~lS~N~i~~v~--nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKL-RRLILSQNRIRTVQ--NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLK 358 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccce-eEEeccccceeeeh--hhhhcccceEeecccchhH-hhhhhHhhhcCEeeee
Confidence 46778888888887 455555555666 77888888887443 3777888888888888887 3444556678888888
Q ss_pred ccCCcccccCcccCCCCCCCCEEeCCCCcccccC-CccccCCCCCCEEeCCCCcccccCCC
Q 046340 488 MKGNFFQGNIPSSFSSLRGMQNLDLSRNNLSGRI-PKYFENFFFLQNLNLSSNHFEGEVPV 547 (715)
Q Consensus 488 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~~~~L~~L~ls~N~l~~~~~~ 547 (715)
|++|.+... +.+..+-+|..||+++|+|.... -..++++|.|+.+.|.+|++.+.+.+
T Consensus 359 La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vdY 417 (490)
T KOG1259|consen 359 LAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVDY 417 (490)
T ss_pred hhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccchH
Confidence 888888633 45667778888889888887653 25678888888888888988876553
No 31
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.12 E-value=9.9e-12 Score=121.89 Aligned_cols=208 Identities=19% Similarity=0.172 Sum_probs=115.5
Q ss_pred CCCCCEEEeeCccccccCC-ccccCCCCCCEEEeecccceecccc---ccCcCCCcEEEcccCCCCCCCCCCcccccccc
Q 046340 208 LPNLEVLNVGGNQFTGPIP-ASISNASNLMRLTIAKNGFSGRVPS---LENLYKLQWVSISHNHLGNYGEKDNLEFVNSL 283 (715)
Q Consensus 208 l~~L~~L~L~~n~l~~~~~-~~l~~~~~L~~L~L~~n~~~~~~~~---~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~l 283 (715)
+.+|+.+.|.++.+..... .....|++++.|||+.|-+....+. ...+++|+.|+++.|++........ -
T Consensus 120 ~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~------~ 193 (505)
T KOG3207|consen 120 LKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNT------T 193 (505)
T ss_pred HHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccc------h
Confidence 4455555566555542211 2445566666777766666554332 5667777777777777655332211 1
Q ss_pred ccCCCCCEEEccCCcccccCChhHhhccccCcEEEccccceeecCCccccCCCCCCEEEcCCceeeeecC-ccccCCCCc
Q 046340 284 VNASRLELLEISDNNFGGMLPEAVGNLSTRLRKLIVGNNQLFGNIPSGLRNLVNLELLHLGGNQFTGQIP-GSIGDLHKL 362 (715)
Q Consensus 284 ~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L 362 (715)
..++.++.|.++.|.++.....++....++|+.|++..|............+..|++|||++|.+.+... ...+.++.|
T Consensus 194 ~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L 273 (505)
T KOG3207|consen 194 LLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGL 273 (505)
T ss_pred hhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccch
Confidence 1356677777777777633333333333447777777774322333334556677778887777764321 344567777
Q ss_pred cEEEccCCcccccCCcc------ccCCCCCCeEeccCCcccccC-CcccccCCCCCEEeCcCcccc
Q 046340 363 QWLMLPANEFWGEIPSS------IGNLTSLAILAFDENMLEGSI-PSSLGKCQNLILLDLSNNNLS 421 (715)
Q Consensus 363 ~~L~L~~n~i~~~~~~~------~~~l~~L~~L~l~~n~i~~~~-~~~~~~~~~L~~L~L~~n~l~ 421 (715)
+.|+++.+.+..+-... ....++|++|++..|++.+.. -..+..+++|+.|....|.+.
T Consensus 274 ~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 274 NQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred hhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 77777777665432111 234566677777766664211 112333455666666666655
No 32
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.12 E-value=4.4e-11 Score=107.47 Aligned_cols=124 Identities=28% Similarity=0.293 Sum_probs=52.9
Q ss_pred CCeEEEEcCCCCCCcccCcccc-CCCCCCEEeCCCCCCCccCChhhcCCCCCcEEecCCCcCcccCCccccCCCCCCEEE
Q 046340 16 QRVTGLRLPSLLLQGSLSPHIG-NLSFLRVLDLKNNSFRDEIPQEIGYLFRLQILALHNNTFGGQIPDNISHCVNLESLG 94 (715)
Q Consensus 16 ~~v~~l~l~~~~l~~~~~~~~~-~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (715)
-..+.|+|++|.|+.. +.++ .+.+|+.|||++|.|+.+. .+..++.|++|++++|+|+...+.....+++|++|+
T Consensus 19 ~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l~--~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 19 VKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKLE--GLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELY 94 (175)
T ss_dssp -------------------S--TT-TT--EEE-TTS--S--T--T----TT--EEE--SS---S-CHHHHHH-TT--EEE
T ss_pred cccccccccccccccc--cchhhhhcCCCEEECCCCCCcccc--CccChhhhhhcccCCCCCCccccchHHhCCcCCEEE
Confidence 5678999999999854 3555 6899999999999998653 588999999999999999955333235799999999
Q ss_pred ccCCcCccCcc-ccccCCCCCCEEEeeccccccccCc----cccCCCCCCEEEcc
Q 046340 95 LGVNELVGKVP-GKLGSLSKLWILSVHYNSLSGEIPS----SFGNLSSLEFLSAA 144 (715)
Q Consensus 95 L~~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~----~~~~l~~L~~L~l~ 144 (715)
+++|+|..... ..+..+++|+.|+|.+|.++.. +. .+..+|+|+.||-.
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-TT-SEETTE
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcChhheeCCE
Confidence 99999975433 4577899999999999998733 32 35667888888643
No 33
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.12 E-value=5.1e-12 Score=120.57 Aligned_cols=207 Identities=24% Similarity=0.296 Sum_probs=135.9
Q ss_pred CCeEEEEcCCCCCCccc----CccccCCCCCCEEeCCCC---CCCccCChh-------hcCCCCCcEEecCCCcCcccCC
Q 046340 16 QRVTGLRLPSLLLQGSL----SPHIGNLSFLRVLDLKNN---SFRDEIPQE-------IGYLFRLQILALHNNTFGGQIP 81 (715)
Q Consensus 16 ~~v~~l~l~~~~l~~~~----~~~~~~l~~L~~L~Ls~n---~i~~~~~~~-------~~~l~~L~~L~Ls~n~i~~~~~ 81 (715)
+.++.|+||+|.+...- .+.+.+.++|+..++|.- ++.+.+|+. +.+.++|++|+||.|-+....+
T Consensus 30 ~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~ 109 (382)
T KOG1909|consen 30 DSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGI 109 (382)
T ss_pred CceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccch
Confidence 67899999999888753 445677789999998865 233334433 4567899999999998765544
Q ss_pred cc----ccCCCCCCEEEccCCcCccCcccc-------------ccCCCCCCEEEeecccccc----ccCccccCCCCCCE
Q 046340 82 DN----ISHCVNLESLGLGVNELVGKVPGK-------------LGSLSKLWILSVHYNSLSG----EIPSSFGNLSSLEF 140 (715)
Q Consensus 82 ~~----~~~l~~L~~L~L~~n~l~~~~~~~-------------~~~l~~L~~L~Ls~n~l~~----~~~~~~~~l~~L~~ 140 (715)
.. +.++..|++|.|.+|.+....-.. ...-++|+.+...+|++.. .+...|...+.|+.
T Consensus 110 ~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~lee 189 (382)
T KOG1909|consen 110 RGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTLEE 189 (382)
T ss_pred HHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhccccce
Confidence 44 356788999999998775222222 2345778888888888752 22345667778888
Q ss_pred EEcccCccee----cCCccccCCCCCCEEEeecccCcccC----CccccCCCCCcEEEccCCccceecCcc----hhcCC
Q 046340 141 LSAAANQFVG----QFPETLSELKMMRYISFGENKLSGEI----PFSIYNLSSLTHFYFPFNQLQGSLPSD----LGFTL 208 (715)
Q Consensus 141 L~l~~n~~~~----~~~~~l~~l~~L~~L~L~~n~i~~~~----~~~l~~l~~L~~L~l~~n~i~~~~~~~----~~~~l 208 (715)
+.+..|.+.. ....+|..+++|+.|||.+|.++... ...+..++.|+.|++++|.+...-... +-...
T Consensus 190 vr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~ 269 (382)
T KOG1909|consen 190 VRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESA 269 (382)
T ss_pred EEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccC
Confidence 8888887642 12335677788888888888776432 234555667777777777665322222 22235
Q ss_pred CCCCEEEeeCcccc
Q 046340 209 PNLEVLNVGGNQFT 222 (715)
Q Consensus 209 ~~L~~L~L~~n~l~ 222 (715)
|+|+++.+.+|.++
T Consensus 270 p~L~vl~l~gNeIt 283 (382)
T KOG1909|consen 270 PSLEVLELAGNEIT 283 (382)
T ss_pred CCCceeccCcchhH
Confidence 66666666666665
No 34
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.11 E-value=1.1e-10 Score=123.50 Aligned_cols=197 Identities=35% Similarity=0.458 Sum_probs=98.5
Q ss_pred EEEccccceeecCCccccCCCCCCEEEcCCceeeeecCccccCCC-CccEEEccCCcccccCCccccCCCCCCeEeccCC
Q 046340 316 KLIVGNNQLFGNIPSGLRNLVNLELLHLGGNQFTGQIPGSIGDLH-KLQWLMLPANEFWGEIPSSIGNLTSLAILAFDEN 394 (715)
Q Consensus 316 ~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n 394 (715)
.+.+..+.+... ...+..++.++.|++.+|.++. ++....... +|+.|++++|.+... +..+..++.|+.|++++|
T Consensus 97 ~l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~~-i~~~~~~~~~nL~~L~l~~N~i~~l-~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSN-ISELLELTNLTSLDLDNNNITD-IPPLIGLLKSNLKELDLSDNKIESL-PSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccC-chhhhcccceeEEecCCccccc-Cccccccchhhcccccccccchhhh-hhhhhccccccccccCCc
Confidence 355555554221 1223344556666666666652 333333332 556666666655322 233445555555555555
Q ss_pred cccccCCcccccCCCCCEEeCcCcccccccCccccccccccceEEccCCcccccCCcCCcCCCCCCceeccCCcCccccC
Q 046340 395 MLEGSIPSSLGKCQNLILLDLSNNNLSGTIPTEVIGLSSLSIYLDLSQNQLNGSLPPNFGILKNLGGIDISENKLSGEIP 474 (715)
Q Consensus 395 ~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 474 (715)
++... +......+.|+.|++++|++. .+|.. ......|++|.+++|.+. ..+
T Consensus 174 ~l~~l-~~~~~~~~~L~~L~ls~N~i~-~l~~~-------------------------~~~~~~L~~l~~~~N~~~-~~~ 225 (394)
T COG4886 174 DLSDL-PKLLSNLSNLNNLDLSGNKIS-DLPPE-------------------------IELLSALEELDLSNNSII-ELL 225 (394)
T ss_pred hhhhh-hhhhhhhhhhhheeccCCccc-cCchh-------------------------hhhhhhhhhhhhcCCcce-ecc
Confidence 55532 222223445555555555554 22322 223334555555555432 334
Q ss_pred hhhhcCcccccccccCCcccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEeCCCCcccccCC
Q 046340 475 NSLGSCIRLEELVMKGNFFQGNIPSSFSSLRGMQNLDLSRNNLSGRIPKYFENFFFLQNLNLSSNHFEGEVP 546 (715)
Q Consensus 475 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~ls~N~l~~~~~ 546 (715)
..+..+..+..+.+.+|++.. .+..+..+++++.|++++|.++...+ +....+++.|++++|.+....+
T Consensus 226 ~~~~~~~~l~~l~l~~n~~~~-~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 226 SSLSNLKNLSGLELSNNKLED-LPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred hhhhhcccccccccCCceeee-ccchhccccccceecccccccccccc--ccccCccCEEeccCccccccch
Confidence 445555556666666666552 24455555566666666666655443 5566666666666666654444
No 35
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.09 E-value=1e-10 Score=123.81 Aligned_cols=200 Identities=30% Similarity=0.425 Sum_probs=132.5
Q ss_pred CEEEccCCcccccCChhHhhccccCcEEEccccceeecCCccccCCC-CCCEEEcCCceeeeecCccccCCCCccEEEcc
Q 046340 290 ELLEISDNNFGGMLPEAVGNLSTRLRKLIVGNNQLFGNIPSGLRNLV-NLELLHLGGNQFTGQIPGSIGDLHKLQWLMLP 368 (715)
Q Consensus 290 ~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 368 (715)
..++++.+.+.... ..+... ..++.|++.+|.++.+ +....... +|+.|++++|.+. ..+..+..+++|+.|+++
T Consensus 96 ~~l~~~~~~~~~~~-~~~~~~-~~l~~L~l~~n~i~~i-~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~ 171 (394)
T COG4886 96 PSLDLNLNRLRSNI-SELLEL-TNLTSLDLDNNNITDI-PPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLS 171 (394)
T ss_pred ceeeccccccccCc-hhhhcc-cceeEEecCCcccccC-ccccccchhhcccccccccchh-hhhhhhhccccccccccC
Confidence 46888888774222 223333 3499999999999854 44455664 9999999999998 455678999999999999
Q ss_pred CCcccccCCccccCCCCCCeEeccCCcccccCCcccccCCCCCEEeCcCcccccccCccccccccccceEEccCCccccc
Q 046340 369 ANEFWGEIPSSIGNLTSLAILAFDENMLEGSIPSSLGKCQNLILLDLSNNNLSGTIPTEVIGLSSLSIYLDLSQNQLNGS 448 (715)
Q Consensus 369 ~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~L~Ls~n~i~~~ 448 (715)
+|++.... ......+.|+.|++++|++.. +|........|++|.+++|++. ..+..+..+.
T Consensus 172 ~N~l~~l~-~~~~~~~~L~~L~ls~N~i~~-l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~---------------- 232 (394)
T COG4886 172 FNDLSDLP-KLLSNLSNLNNLDLSGNKISD-LPPEIELLSALEELDLSNNSII-ELLSSLSNLK---------------- 232 (394)
T ss_pred Cchhhhhh-hhhhhhhhhhheeccCCcccc-CchhhhhhhhhhhhhhcCCcce-ecchhhhhcc----------------
Confidence 99996543 344478999999999999994 4544455667999999998633 2333333333
Q ss_pred CCcCCcCCCCCCceeccCCcCccccChhhhcCcccccccccCCcccccCcccCCCCCCCCEEeCCCCcccccCCcc
Q 046340 449 LPPNFGILKNLGGIDISENKLSGEIPNSLGSCIRLEELVMKGNFFQGNIPSSFSSLRGMQNLDLSRNNLSGRIPKY 524 (715)
Q Consensus 449 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 524 (715)
++..+.+++|++.. .+..++.+++++.|++++|.++.+.. +..+.+++.|++++|.+...++..
T Consensus 233 ---------~l~~l~l~~n~~~~-~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 233 ---------NLSGLELSNNKLED-LPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred ---------cccccccCCceeee-ccchhccccccceecccccccccccc--ccccCccCEEeccCccccccchhh
Confidence 33444444444431 13445555556666666666653332 555666666666666666554443
No 36
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.09 E-value=3.8e-12 Score=121.42 Aligned_cols=190 Identities=21% Similarity=0.237 Sum_probs=111.8
Q ss_pred cccCCCCCCEEEcCCceeeeecCc----cccCCCCccEEEccCCcccccCCcc-------------ccCCCCCCeEeccC
Q 046340 331 GLRNLVNLELLHLGGNQFTGQIPG----SIGDLHKLQWLMLPANEFWGEIPSS-------------IGNLTSLAILAFDE 393 (715)
Q Consensus 331 ~~~~l~~L~~L~L~~n~i~~~~~~----~~~~l~~L~~L~L~~n~i~~~~~~~-------------~~~l~~L~~L~l~~ 393 (715)
++.+++.|++|+||+|.+.-..+. .+..+..|++|.|.+|.+...-... ...-+.|+++...+
T Consensus 87 aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~r 166 (382)
T KOG1909|consen 87 ALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGR 166 (382)
T ss_pred HHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeec
Confidence 345667788888888877533332 3456777888888877663222111 22335666666666
Q ss_pred CcccccC----CcccccCCCCCEEeCcCcccccccCccccccccccceEEccCCcccccCCcCCcCCCCCCceeccCCcC
Q 046340 394 NMLEGSI----PSSLGKCQNLILLDLSNNNLSGTIPTEVIGLSSLSIYLDLSQNQLNGSLPPNFGILKNLGGIDISENKL 469 (715)
Q Consensus 394 n~i~~~~----~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 469 (715)
|++.... ...|...+.|+.+.++.|.|.. .... .....|..++.|+.|||.+|.+
T Consensus 167 Nrlen~ga~~~A~~~~~~~~leevr~~qN~I~~---eG~~------------------al~eal~~~~~LevLdl~DNtf 225 (382)
T KOG1909|consen 167 NRLENGGATALAEAFQSHPTLEEVRLSQNGIRP---EGVT------------------ALAEALEHCPHLEVLDLRDNTF 225 (382)
T ss_pred cccccccHHHHHHHHHhccccceEEEecccccC---chhH------------------HHHHHHHhCCcceeeecccchh
Confidence 6665322 2334555666666666665541 1110 1113455667777777777766
Q ss_pred ccc----cChhhhcCcccccccccCCcccccCcccCC-----CCCCCCEEeCCCCccccc----CCccccCCCCCCEEeC
Q 046340 470 SGE----IPNSLGSCIRLEELVMKGNFFQGNIPSSFS-----SLRGMQNLDLSRNNLSGR----IPKYFENFFFLQNLNL 536 (715)
Q Consensus 470 ~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~----~~~~~~~~~~L~~L~l 536 (715)
+.. ....+..++.|++|++++|.+......+|. ..+.|++|.+.+|.++.. +.......+.|.+|+|
T Consensus 226 t~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnL 305 (382)
T KOG1909|consen 226 TLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNL 305 (382)
T ss_pred hhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcC
Confidence 532 223445566777777777777654333321 357788888888877643 2234455678888888
Q ss_pred CCCcc
Q 046340 537 SSNHF 541 (715)
Q Consensus 537 s~N~l 541 (715)
++|.+
T Consensus 306 ngN~l 310 (382)
T KOG1909|consen 306 NGNRL 310 (382)
T ss_pred Ccccc
Confidence 88888
No 37
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.02 E-value=1.2e-10 Score=124.29 Aligned_cols=71 Identities=27% Similarity=0.504 Sum_probs=58.2
Q ss_pred hcCCccccccCcCCCceEEEEEECC---CCceeEEEEEEeeccCCc-chHHHHHHHHHHhcCCCCCcceEEEEeC
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNH---DDHETLVAVKVLNLQHRG-ASKSFMAQCQALRSVRHRNLVKIITSCA 715 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~---~~~~~~~avk~l~~~~~~-~~~~~~~e~~~l~~~~h~niv~l~g~~~ 715 (715)
..+....+.||+|.||+||+|+..+ ++..+.||||+++..+.. ...+|+||++.++.++|||||+|+|+|.
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~ 559 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCR 559 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEc
Confidence 4444556889999999999999643 224468999999876554 5679999999999999999999999993
No 38
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.01 E-value=3e-11 Score=112.47 Aligned_cols=128 Identities=23% Similarity=0.216 Sum_probs=54.5
Q ss_pred CCCcEEecCCCcCcccCCccccCCCCCCEEEccCCcCccCccccccCCCCCCEEEeeccccccccCccccCCCCCCEEEc
Q 046340 64 FRLQILALHNNTFGGQIPDNISHCVNLESLGLGVNELVGKVPGKLGSLSKLWILSVHYNSLSGEIPSSFGNLSSLEFLSA 143 (715)
Q Consensus 64 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l 143 (715)
..|+.||||+|.|+ .+.++..-.|.++.|++++|.+..+ +.+..+++|++||||+|.++ ....+-..+-+.++|.|
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKL 359 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeeh
Confidence 34444444444444 2222333444444444444444322 12444444444444444444 22233333444444444
Q ss_pred ccCcceecCCccccCCCCCCEEEeecccCcccC-CccccCCCCCcEEEccCCccc
Q 046340 144 AANQFVGQFPETLSELKMMRYISFGENKLSGEI-PFSIYNLSSLTHFYFPFNQLQ 197 (715)
Q Consensus 144 ~~n~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~-~~~l~~l~~L~~L~l~~n~i~ 197 (715)
++|.+... ..+.++-+|..||+++|+|.... ...+++++-|+.+.+.+|.+.
T Consensus 360 a~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 360 AQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred hhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 44444321 22334444444555555443221 123445555555555555443
No 39
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=98.98 E-value=4.4e-10 Score=118.04 Aligned_cols=80 Identities=26% Similarity=0.491 Sum_probs=63.5
Q ss_pred chHHHHHHhhcCCc---------cccccCcCCCceEEEEEECC-CCceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCC
Q 046340 636 VSYQNLIKATDGFS---------LENLIGAGSFGSVYKGILNH-DDHETLVAVKVLNLQH-RGASKSFMAQCQALRSVRH 704 (715)
Q Consensus 636 ~~~~~~~~~~~~f~---------~~~~lg~g~~g~vy~~~~~~-~~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h 704 (715)
++|++.-.|...|. ++++||.|.||+||+|+++- ++....||||.++.+. .++..+|+.|+.||.+++|
T Consensus 610 ~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdH 689 (996)
T KOG0196|consen 610 HTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDH 689 (996)
T ss_pred ccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCC
Confidence 46666655555553 56789999999999999863 2344689999998764 3456789999999999999
Q ss_pred CCcceEEEEeC
Q 046340 705 RNLVKIITSCA 715 (715)
Q Consensus 705 ~niv~l~g~~~ 715 (715)
|||++|-|+.+
T Consensus 690 PNIIrLEGVVT 700 (996)
T KOG0196|consen 690 PNIIRLEGVVT 700 (996)
T ss_pred CcEEEEEEEEe
Confidence 99999999863
No 40
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.94 E-value=5.7e-10 Score=82.31 Aligned_cols=60 Identities=35% Similarity=0.432 Sum_probs=33.2
Q ss_pred CCCCEEeCCCCCCCccCChhhcCCCCCcEEecCCCcCcccCCccccCCCCCCEEEccCCc
Q 046340 40 SFLRVLDLKNNSFRDEIPQEIGYLFRLQILALHNNTFGGQIPDNISHCVNLESLGLGVNE 99 (715)
Q Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 99 (715)
|+|++|++++|+++.+.++.|.++++|++|++++|+++...++.|.++++|++|++++|+
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 345555555555555555555555555555555555555555555555555555555554
No 41
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.92 E-value=1.4e-09 Score=122.83 Aligned_cols=129 Identities=25% Similarity=0.279 Sum_probs=73.7
Q ss_pred CCeEEEEcCCCCCCcccCccccCCCCCCEEeCCCCC--CCccCChhhcCCCCCcEEecCCCcCcccCCccccCCCCCCEE
Q 046340 16 QRVTGLRLPSLLLQGSLSPHIGNLSFLRVLDLKNNS--FRDEIPQEIGYLFRLQILALHNNTFGGQIPDNISHCVNLESL 93 (715)
Q Consensus 16 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~--i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (715)
..++++.+.++.+.-. ..-..++.|++|=+..|. +..+.++.|..++.|++|||++|.--+..|+.++.+.+||+|
T Consensus 523 ~~~rr~s~~~~~~~~~--~~~~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIEHI--AGSSENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred hheeEEEEeccchhhc--cCCCCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 4556666655544421 112233356666666664 444444456666666666666665545566666666666666
Q ss_pred EccCCcCccCccccccCCCCCCEEEeeccccccccCccccCCCCCCEEEcccCc
Q 046340 94 GLGVNELVGKVPGKLGSLSKLWILSVHYNSLSGEIPSSFGNLSSLEFLSAAANQ 147 (715)
Q Consensus 94 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~ 147 (715)
++++..+. .+|..+.++.+|.+||+..+.-....+.....+++|++|.+....
T Consensus 601 ~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 601 DLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred cccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 66666665 556666666666666666655332334445556666666665443
No 42
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.91 E-value=2.7e-10 Score=120.49 Aligned_cols=215 Identities=30% Similarity=0.330 Sum_probs=130.4
Q ss_pred CcEEEccccceeecCCccccCCCCCCEEEcCCceeeeecCccccCCCCccEEEccCCcccccCCccccCCCCCCeEeccC
Q 046340 314 LRKLIVGNNQLFGNIPSGLRNLVNLELLHLGGNQFTGQIPGSIGDLHKLQWLMLPANEFWGEIPSSIGNLTSLAILAFDE 393 (715)
Q Consensus 314 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~ 393 (715)
++.+.+..|.+.. ....+..+++|+.|++.+|.|..+ ...+..+++|++|++++|.|+...+ +..++.|+.|++.+
T Consensus 74 l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~~ 149 (414)
T KOG0531|consen 74 LKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLSG 149 (414)
T ss_pred HHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheeccccccccccc--hhhccchhhheecc
Confidence 5555666666653 223356667777777777777633 2225667777777777777765533 45566677777777
Q ss_pred CcccccCCcccccCCCCCEEeCcCcccccccCccccccccccceEEccCCcccccCCcCCcCCCCCCceeccCCcCcccc
Q 046340 394 NMLEGSIPSSLGKCQNLILLDLSNNNLSGTIPTEVIGLSSLSIYLDLSQNQLNGSLPPNFGILKNLGGIDISENKLSGEI 473 (715)
Q Consensus 394 n~i~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 473 (715)
|.|... ..+..++.|+.+++++|++....+.....+..+ +.+++++|.+... ..+..+..+..+++..|.++...
T Consensus 150 N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l-~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i~~~~ 224 (414)
T KOG0531|consen 150 NLISDI--SGLESLKSLKLLDLSYNRIVDIENDELSELISL-EELDLGGNSIREI--EGLDLLKKLVLLSLLDNKISKLE 224 (414)
T ss_pred Ccchhc--cCCccchhhhcccCCcchhhhhhhhhhhhccch-HHHhccCCchhcc--cchHHHHHHHHhhcccccceecc
Confidence 777643 234557777777777777774333003445555 5677777777633 22333445555577777776432
Q ss_pred ChhhhcCcc--cccccccCCcccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEeCCCCccc
Q 046340 474 PNSLGSCIR--LEELVMKGNFFQGNIPSSFSSLRGMQNLDLSRNNLSGRIPKYFENFFFLQNLNLSSNHFE 542 (715)
Q Consensus 474 ~~~~~~l~~--L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~ls~N~l~ 542 (715)
+ +..+.. |+.+++++|.+... +..+..+..+..|++.+|++.... .+...+.+..+.+..|.+.
T Consensus 225 ~--l~~~~~~~L~~l~l~~n~i~~~-~~~~~~~~~l~~l~~~~n~~~~~~--~~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 225 G--LNELVMLHLRELYLSGNRISRS-PEGLENLKNLPVLDLSSNRISNLE--GLERLPKLSELWLNDNKLA 290 (414)
T ss_pred C--cccchhHHHHHHhcccCccccc-cccccccccccccchhhccccccc--cccccchHHHhccCcchhc
Confidence 2 222333 77888888887733 245566677788888888776542 2334455666666666655
No 43
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.90 E-value=8.4e-10 Score=81.39 Aligned_cols=61 Identities=39% Similarity=0.521 Sum_probs=40.6
Q ss_pred cccccccccCCcccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEeCCCCcc
Q 046340 481 IRLEELVMKGNFFQGNIPSSFSSLRGMQNLDLSRNNLSGRIPKYFENFFFLQNLNLSSNHF 541 (715)
Q Consensus 481 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~ls~N~l 541 (715)
++|++|++++|+++.+.++.|.++++|+.|++++|.++.+.++.|.++++|++|++++|++
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3566666666666666666666666666666666666666666666666777777666654
No 44
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.87 E-value=1.5e-10 Score=122.44 Aligned_cols=130 Identities=23% Similarity=0.266 Sum_probs=71.8
Q ss_pred cCCCCCcEEecCCCcCcccCCccccCCCCCCEEEccCCcCccCccccccCCCCCCEEEeeccccccccCccccCCCCCCE
Q 046340 61 GYLFRLQILALHNNTFGGQIPDNISHCVNLESLGLGVNELVGKVPGKLGSLSKLWILSVHYNSLSGEIPSSFGNLSSLEF 140 (715)
Q Consensus 61 ~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 140 (715)
..+..++.+.++.|.+.. .-..+..+.+|+.|++.+|+|..+.. .+..+++|++|++++|.|+.. ..+..++.|+.
T Consensus 69 ~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~~-~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~ 144 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIEN-LLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKE 144 (414)
T ss_pred HHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhccc-chhhhhcchheeccccccccc--cchhhccchhh
Confidence 345555556666666552 23335556666666666666654322 145566666666666666522 23445555666
Q ss_pred EEcccCcceecCCccccCCCCCCEEEeecccCcccCC-ccccCCCCCcEEEccCCccc
Q 046340 141 LSAAANQFVGQFPETLSELKMMRYISFGENKLSGEIP-FSIYNLSSLTHFYFPFNQLQ 197 (715)
Q Consensus 141 L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~~-~~l~~l~~L~~L~l~~n~i~ 197 (715)
|++.+|.+..+ ..+..++.|+.+++++|.+....+ . ...+.+++.+++.+|.+.
T Consensus 145 L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 145 LNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIR 199 (414)
T ss_pred heeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchh
Confidence 66666666543 233445666666666666654433 1 345555666666666554
No 45
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=98.86 E-value=3e-09 Score=104.12 Aligned_cols=70 Identities=26% Similarity=0.512 Sum_probs=58.3
Q ss_pred hhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeecc--CCcchHHHHHHHHHHhcCCCCCcceEEEEeC
Q 046340 644 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQ--HRGASKSFMAQCQALRSVRHRNLVKIITSCA 715 (715)
Q Consensus 644 ~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~--~~~~~~~~~~e~~~l~~~~h~niv~l~g~~~ 715 (715)
...+|.....||+|+||+||+|+++... ..||||.+... .++..+-..+|+++++.++|||||+|+.+++
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~--~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~ 79 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSG--TEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIE 79 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCC--ceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEe
Confidence 3567888888999999999999997764 49999999755 3333455789999999999999999998874
No 46
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=98.81 E-value=4e-09 Score=108.97 Aligned_cols=75 Identities=27% Similarity=0.432 Sum_probs=57.8
Q ss_pred HHHhhcCCccccccCcCCCceEEEEEECCCCc--eeEEEEEEeecc---CCcchHHHHHHHHHHhcCCCCCcceEEEEeC
Q 046340 641 LIKATDGFSLENLIGAGSFGSVYKGILNHDDH--ETLVAVKVLNLQ---HRGASKSFMAQCQALRSVRHRNLVKIITSCA 715 (715)
Q Consensus 641 ~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~--~~~~avk~l~~~---~~~~~~~~~~e~~~l~~~~h~niv~l~g~~~ 715 (715)
|+-.-++....+.||+|+||.||+|++..++. ...||||+.+.. .+.+..+|.+|+.+|++++|||||+|+|+|+
T Consensus 152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~ 231 (474)
T KOG0194|consen 152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAV 231 (474)
T ss_pred cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 33333444555899999999999999875422 123899999752 2445678999999999999999999999984
No 47
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.79 E-value=4.3e-09 Score=118.84 Aligned_cols=133 Identities=23% Similarity=0.325 Sum_probs=103.3
Q ss_pred ccCCCCCCEEeCCCCCCCccCChhhcCCCCCcEEecCCCc--CcccCCccccCCCCCCEEEccCCcCccCccccccCCCC
Q 046340 36 IGNLSFLRVLDLKNNSFRDEIPQEIGYLFRLQILALHNNT--FGGQIPDNISHCVNLESLGLGVNELVGKVPGKLGSLSK 113 (715)
Q Consensus 36 ~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~--i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 113 (715)
..+....+...+-+|.+..+ +.. ...+.|++|-+..|. +.....+.|..++.|+.|||++|.--+.+|..++++-+
T Consensus 519 ~~~~~~~rr~s~~~~~~~~~-~~~-~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~ 596 (889)
T KOG4658|consen 519 VKSWNSVRRMSLMNNKIEHI-AGS-SENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVH 596 (889)
T ss_pred ccchhheeEEEEeccchhhc-cCC-CCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhh
Confidence 44446777888877877533 222 234579999998886 55444556888999999999988766788999999999
Q ss_pred CCEEEeeccccccccCccccCCCCCCEEEcccCcceecCCccccCCCCCCEEEeeccc
Q 046340 114 LWILSVHYNSLSGEIPSSFGNLSSLEFLSAAANQFVGQFPETLSELKMMRYISFGENK 171 (715)
Q Consensus 114 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~ 171 (715)
|++|+++++.++ .+|..+.++..|.+|++..+.-....+.....+++|++|.+..-.
T Consensus 597 LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 597 LRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred hhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 999999999988 788899999999999998877665667777778899988886654
No 48
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=98.77 E-value=9.1e-09 Score=104.75 Aligned_cols=64 Identities=34% Similarity=0.648 Sum_probs=52.9
Q ss_pred ccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcc--hHHHHHHHHHHhcCCCCCcceEEEEeC
Q 046340 649 SLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGA--SKSFMAQCQALRSVRHRNLVKIITSCA 715 (715)
Q Consensus 649 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~--~~~~~~e~~~l~~~~h~niv~l~g~~~ 715 (715)
...+.+|+|+||+||+|.|.+. . .||||++....... .++|.+|+.+|++++|||||+|+|+|.
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~-~--~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~ 109 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGT-D--VVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACT 109 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCc-e--eEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence 3345699999999999999766 2 49999997554322 458999999999999999999999984
No 49
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=98.76 E-value=2.8e-09 Score=109.02 Aligned_cols=75 Identities=23% Similarity=0.520 Sum_probs=65.5
Q ss_pred HHHHHHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEeC
Q 046340 638 YQNLIKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSCA 715 (715)
Q Consensus 638 ~~~~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~~ 715 (715)
+++|+....+..-.+++|-|.||.||.|.|+... ..||||.++.... ..++|.+|+.+|..++|||+|+|+|+|+
T Consensus 259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkys--lTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT 333 (1157)
T KOG4278|consen 259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS--LTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 333 (1157)
T ss_pred cchhhccchheeeeeccCCCcccceeeeeeeccc--eeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhc
Confidence 4778877778888899999999999999997653 3899999986644 3678999999999999999999999995
No 50
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=98.75 E-value=5e-09 Score=106.49 Aligned_cols=73 Identities=27% Similarity=0.492 Sum_probs=59.4
Q ss_pred HHHHHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEeC
Q 046340 639 QNLIKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSCA 715 (715)
Q Consensus 639 ~~~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~~ 715 (715)
+.|+.....+...+.||+|.||+||.|.|.+. . .||+|.++.... ..++|.+|+.+|++++|+|||+++|+|.
T Consensus 199 d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~-~--~vavk~ik~~~m-~~~~f~~Ea~iMk~L~H~~lV~l~gV~~ 271 (468)
T KOG0197|consen 199 DPWEIPREELKLIRELGSGQFGEVWLGKWNGS-T--KVAVKTIKEGSM-SPEAFLREAQIMKKLRHEKLVKLYGVCT 271 (468)
T ss_pred CCeeecHHHHHHHHHhcCCccceEEEEEEcCC-C--cccceEEecccc-ChhHHHHHHHHHHhCcccCeEEEEEEEe
Confidence 33443444455568899999999999999766 3 699999987643 3578999999999999999999999994
No 51
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.73 E-value=3.8e-08 Score=97.41 Aligned_cols=61 Identities=28% Similarity=0.596 Sum_probs=50.0
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhc--CCCCCcceEEEE
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRS--VRHRNLVKIITS 713 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~--~~h~niv~l~g~ 713 (715)
.+....+.||+|.||+||+|.|++. .||||++... +++.+-||.+|-.. ++|+||..|+|+
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wrGe----~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaa 273 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWRGE----DVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAA 273 (513)
T ss_pred heeEEEEEecCccccceeeccccCC----ceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhc
Confidence 3445678899999999999999876 7999999633 35678888888875 599999999875
No 52
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=98.69 E-value=2.4e-08 Score=101.86 Aligned_cols=65 Identities=26% Similarity=0.482 Sum_probs=55.9
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcc-hHHHHHHHHHHhcCCCCCcceEEEEeC
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGA-SKSFMAQCQALRSVRHRNLVKIITSCA 715 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~-~~~~~~e~~~l~~~~h~niv~l~g~~~ 715 (715)
....++||+|.||+|..+...+. ..||||++++.+.+. ..+|.+||++|.+++|||||+++|+|.
T Consensus 540 L~~~ekiGeGqFGEVhLCeveg~---lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~ 605 (807)
T KOG1094|consen 540 LRFKEKIGEGQFGEVHLCEVEGP---LKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCV 605 (807)
T ss_pred eehhhhhcCcccceeEEEEecCc---eEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeee
Confidence 34558899999999999998663 389999998776444 478999999999999999999999994
No 53
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=98.68 E-value=1.4e-08 Score=107.47 Aligned_cols=67 Identities=31% Similarity=0.559 Sum_probs=54.7
Q ss_pred CccccccCcCCCceEEEEEECC-C-CceeEEEEEEeecc-CCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNH-D-DHETLVAVKVLNLQ-HRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~-~-~~~~~~avk~l~~~-~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+..+.+||+|+||.||||.|-. + .-..+||+|.+... ..+...++.+|+-+|++++|||+++++|+|
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc 767 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVC 767 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhc
Confidence 3456889999999999999842 2 23368999999643 345567899999999999999999999998
No 54
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.66 E-value=2e-08 Score=100.88 Aligned_cols=67 Identities=27% Similarity=0.463 Sum_probs=54.0
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..|+..++||+|.||.||||+- ..++..||+|+++... ........|||.||++++|||||+|.|..
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~--~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eiv 185 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARD--LETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIV 185 (560)
T ss_pred HHHHHHHHhcCcchhheeEeee--cccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEE
Confidence 3466668899999999999994 4456699999997554 23345567999999999999999998864
No 55
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=98.62 E-value=3.2e-08 Score=101.73 Aligned_cols=73 Identities=30% Similarity=0.536 Sum_probs=61.3
Q ss_pred HHHHHHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC--cchHHHHHHHHHHhcCCCCCcceEEEEeC
Q 046340 638 YQNLIKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR--GASKSFMAQCQALRSVRHRNLVKIITSCA 715 (715)
Q Consensus 638 ~~~~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~--~~~~~~~~e~~~l~~~~h~niv~l~g~~~ 715 (715)
.++|+...+.+.....||+|+||+||||+|-+ .||||.+..... .+.+.|..|+.++++=+|.||+=|.|||.
T Consensus 384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG-----dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~ 458 (678)
T KOG0193|consen 384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG-----DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACM 458 (678)
T ss_pred ccccccCHHHhhccceeccccccceeeccccc-----ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhc
Confidence 35666666777778999999999999999954 499999986653 34568999999999999999999999983
No 56
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=98.62 E-value=1.6e-08 Score=94.87 Aligned_cols=65 Identities=25% Similarity=0.373 Sum_probs=51.2
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cch-HHHHHHHHHHhcCCCCCcceEEEE
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GAS-KSFMAQCQALRSVRHRNLVKIITS 713 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~-~~~~~e~~~l~~~~h~niv~l~g~ 713 (715)
.|+..-.+|+|+||+|||++.+++ |+.||||++..... ... +-..|||+++.+++|||+|+++.+
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~T--gqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEV 69 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDT--GQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEV 69 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCc--ccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 455667899999999999996654 55999999965432 222 346899999999999999988654
No 57
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=98.61 E-value=1.1e-08 Score=101.86 Aligned_cols=60 Identities=37% Similarity=0.620 Sum_probs=47.4
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHH--HhcCCCCCcceEEEE
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQA--LRSVRHRNLVKIITS 713 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~--l~~~~h~niv~l~g~ 713 (715)
.......+|+|+||.||||++.+. .||||+++... .+.|+.|-.| +..|+|+||++|+|+
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~~~----~VAVKifp~~~---kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ 272 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLDNR----LVAVKIFPEQE---KQSFQNEKNIYSLPGMKHENILQFIGA 272 (534)
T ss_pred chhhHHHhhcCccceeehhhccCc----eeEEEecCHHH---HHHHHhHHHHHhccCccchhHHHhhch
Confidence 344557899999999999999765 89999997543 3456666555 557899999999986
No 58
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.60 E-value=1.2e-08 Score=92.65 Aligned_cols=70 Identities=23% Similarity=0.366 Sum_probs=58.3
Q ss_pred HhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 643 KATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 643 ~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+.++|+..+.+|+|.||.||.|+.+.+ +..||+|.+.... .+-..++.||++|-+.++||||.+++||.
T Consensus 19 ~~l~dfeigr~LgkgkFG~vYlarekks--~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~f 91 (281)
T KOG0580|consen 19 WTLDDFEIGRPLGKGKFGNVYLAREKKS--LFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYF 91 (281)
T ss_pred cchhhccccccccCCccccEeEeeeccC--CcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhe
Confidence 4567889999999999999999997665 3489999997543 12245789999999999999999999984
No 59
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=98.60 E-value=3.6e-08 Score=91.00 Aligned_cols=65 Identities=22% Similarity=0.459 Sum_probs=52.6
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCc-c-hHHHHHHHHHHhcCCCCCcceEEEE
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRG-A-SKSFMAQCQALRSVRHRNLVKIITS 713 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~-~-~~~~~~e~~~l~~~~h~niv~l~g~ 713 (715)
.|...+.+|+|.||.||+|+- ..+++.||||+++....+ + .....|||+.++.++|+||+.++.+
T Consensus 3 rY~~~~~lGEG~~gvVyka~d--~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~ 69 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARD--TETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDV 69 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEe--cCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhh
Confidence 456668899999999999994 345669999999865432 2 3468899999999999999998765
No 60
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=98.56 E-value=8.6e-08 Score=107.00 Aligned_cols=68 Identities=28% Similarity=0.489 Sum_probs=56.3
Q ss_pred CccccccCcCCCceEEEEEECCCCc---eeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEeC
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDH---ETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSCA 715 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~---~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~~ 715 (715)
....+.||+|.||.||+|++.+-+. ...||||.+++... +...+|.+|+.+|++++|||||+++|.|.
T Consensus 694 v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l 765 (1025)
T KOG1095|consen 694 VTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCL 765 (1025)
T ss_pred eEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeec
Confidence 3456889999999999999865422 34699999987643 45578999999999999999999999983
No 61
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.54 E-value=1.3e-09 Score=101.85 Aligned_cols=141 Identities=18% Similarity=0.228 Sum_probs=87.5
Q ss_pred Cc-ccceeeCCCCCCeEEEEcCCCCCCcccCccccCC--CCCCEEeCCCCCCCcc-CChhhcCC-CCCcEEecCCCcCcc
Q 046340 4 CQ-WKGVTCSPRHQRVTGLRLPSLLLQGSLSPHIGNL--SFLRVLDLKNNSFRDE-IPQEIGYL-FRLQILALHNNTFGG 78 (715)
Q Consensus 4 c~-~~~~~~~~~~~~v~~l~l~~~~l~~~~~~~~~~l--~~L~~L~Ls~n~i~~~-~~~~~~~l-~~L~~L~Ls~n~i~~ 78 (715)
|+ |.++.... ...+.+|+.+-+|. |.....+ ..+..+.+....+... ..+.+.-+ ..|++||||...|+.
T Consensus 125 C~Rfyr~~~de--~lW~~lDl~~r~i~---p~~l~~l~~rgV~v~Rlar~~~~~prlae~~~~frsRlq~lDLS~s~it~ 199 (419)
T KOG2120|consen 125 CKRFYRLASDE--SLWQTLDLTGRNIH---PDVLGRLLSRGVIVFRLARSFMDQPRLAEHFSPFRSRLQHLDLSNSVITV 199 (419)
T ss_pred HHHHhhccccc--cceeeeccCCCccC---hhHHHHHHhCCeEEEEcchhhhcCchhhhhhhhhhhhhHHhhcchhheeH
Confidence 53 77776654 68889999888777 5555555 3445556664444332 22223222 358888888877763
Q ss_pred c-CCccccCCCCCCEEEccCCcCccCccccccCCCCCCEEEeeccc-cccc-cCccccCCCCCCEEEcccCcce
Q 046340 79 Q-IPDNISHCVNLESLGLGVNELVGKVPGKLGSLSKLWILSVHYNS-LSGE-IPSSFGNLSSLEFLSAAANQFV 149 (715)
Q Consensus 79 ~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~-l~~~-~~~~~~~l~~L~~L~l~~n~~~ 149 (715)
. ....+..+.+|+.|.|.++++.+.....+.+-.+|+.|+|+.+. ++.- ..-.|.+++.|.+|+++.|.+.
T Consensus 200 stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~l~ 273 (419)
T KOG2120|consen 200 STLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELNLSWCFLF 273 (419)
T ss_pred HHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcCchHhhcc
Confidence 3 23345677778888888887776666677777788888887764 3311 1112556667777777666654
No 62
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=98.50 E-value=1e-07 Score=98.01 Aligned_cols=70 Identities=30% Similarity=0.610 Sum_probs=56.2
Q ss_pred cCCccccccCcCCCceEEEEEECCC--CceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEeC
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHD--DHETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSCA 715 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~--~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~~ 715 (715)
+.....++||+|.||.||+|.+.+. +....||||.-+... ....+.|..|+.+|++++|||||+++|.|.
T Consensus 389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~ 461 (974)
T KOG4257|consen 389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV 461 (974)
T ss_pred hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee
Confidence 3445668899999999999998542 234568999987543 334578999999999999999999999994
No 63
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.47 E-value=6.8e-09 Score=108.38 Aligned_cols=180 Identities=25% Similarity=0.268 Sum_probs=114.9
Q ss_pred CccccCCCCCCeEeccCCcccccCCcccccC-CCCCEEeCcCcccc----------cccCccccccccccceEEccCCcc
Q 046340 377 PSSIGNLTSLAILAFDENMLEGSIPSSLGKC-QNLILLDLSNNNLS----------GTIPTEVIGLSSLSIYLDLSQNQL 445 (715)
Q Consensus 377 ~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~~-~~L~~L~L~~n~l~----------~~~~~~~~~~~~l~~~L~Ls~n~i 445 (715)
|-.+....+|+.|.+.++++... . .+..+ .+|+.|- ..|.+. +.+... ..+..+ ...+.+.|.+
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~-~-GL~~lr~qLe~LI-C~~Sl~Al~~v~ascggd~~ns-~~Wn~L-~~a~fsyN~L 176 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTA-K-GLQELRHQLEKLI-CHNSLDALRHVFASCGGDISNS-PVWNKL-ATASFSYNRL 176 (1096)
T ss_pred CceeccccceeeEEecCcchhhh-h-hhHHHHHhhhhhh-hhccHHHHHHHHHHhccccccc-hhhhhH-hhhhcchhhH
Confidence 44556678999999999987631 1 11111 2333331 122221 001100 112223 4567778887
Q ss_pred cccCCcCCcCCCCCCceeccCCcCccccChhhhcCcccccccccCCcccccCcccCCCCCCCCEEeCCCCcccccCCccc
Q 046340 446 NGSLPPNFGILKNLGGIDISENKLSGEIPNSLGSCIRLEELVMKGNFFQGNIPSSFSSLRGMQNLDLSRNNLSGRIPKYF 525 (715)
Q Consensus 446 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 525 (715)
. ....++.-++.|+.|||++|+++.. +.+..|+.|++|+|++|.++.+.--...++. |+.|.+++|.++... .+
T Consensus 177 ~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL~--gi 250 (1096)
T KOG1859|consen 177 V-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTLR--GI 250 (1096)
T ss_pred H-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhhh--hH
Confidence 7 3445677778888999999988754 3778888899999999988844332223333 888999999887653 45
Q ss_pred cCCCCCCEEeCCCCcccccCCC--CCCCCCCCccccCCCCCCCC
Q 046340 526 ENFFFLQNLNLSSNHFEGEVPV--KGVFSNSSAISLDGNDNLCG 567 (715)
Q Consensus 526 ~~~~~L~~L~ls~N~l~~~~~~--~~~~~~~~~~~~~~n~~~c~ 567 (715)
.++.+|+.||+++|-+.+.-.. .+.+..+..+.+.|||.-|.
T Consensus 251 e~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 251 ENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred HhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 6788888899999988764433 25566788888899987664
No 64
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=98.46 E-value=1.6e-07 Score=97.89 Aligned_cols=65 Identities=26% Similarity=0.446 Sum_probs=54.2
Q ss_pred cccccCcCCCceEEEEEECCC-CceeEEEEEEeeccCCc-chHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 650 LENLIGAGSFGSVYKGILNHD-DHETLVAVKVLNLQHRG-ASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 650 ~~~~lg~g~~g~vy~~~~~~~-~~~~~~avk~l~~~~~~-~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..+.||+|.||.|++|.|... ...+.||||.++..... .-.+|.+|+.+|.+|+|||+++|||+.
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvV 180 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVV 180 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeee
Confidence 347899999999999999632 23467999999876544 347899999999999999999999985
No 65
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=98.46 E-value=1.7e-07 Score=89.48 Aligned_cols=68 Identities=24% Similarity=0.398 Sum_probs=53.6
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCc--chHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRG--ASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~--~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.++|+..+.|++|.||.||||+-.. +...||+|+++....+ -.-.-.|||.++.+++|||||++..+.
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~--t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVV 144 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKK--TDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVV 144 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCC--cceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEE
Confidence 4567778999999999999999544 4459999999865422 123568999999999999999987653
No 66
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.46 E-value=3e-07 Score=95.08 Aligned_cols=67 Identities=21% Similarity=0.354 Sum_probs=55.6
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeecc---CCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQ---HRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~---~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..|...+.||+|+|+.||+++-.++ +..||+|+++.. +....+...+||+|.++++|||||+|++|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~t--ge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~F 87 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDT--GEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFF 87 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCC--CcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEe
Confidence 4578889999999999999996443 348999999753 234456799999999999999999999873
No 67
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=98.46 E-value=2.6e-07 Score=89.67 Aligned_cols=62 Identities=31% Similarity=0.479 Sum_probs=50.8
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.|...+.+|+|+||.||+|++..... .||||+.....+. -.+|..+|+.++|||||+|+.+.
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~--~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f 86 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEE--EVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFF 86 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCc--eeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEE
Confidence 34556899999999999999977633 8999999655432 35799999999999999998774
No 68
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.42 E-value=4e-08 Score=91.35 Aligned_cols=66 Identities=29% Similarity=0.433 Sum_probs=52.9
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEE
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIIT 712 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g 712 (715)
..+|...++||+|+||.|||+..... +..||.|.+.-.. .+...++.+|+.++++++|||||+.++
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~--g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~ 85 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLD--GKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYA 85 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccC--cchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHH
Confidence 34677779999999999999985443 3489999997433 233457899999999999999999876
No 69
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.42 E-value=4.1e-09 Score=109.96 Aligned_cols=21 Identities=29% Similarity=0.333 Sum_probs=13.8
Q ss_pred CccccCCCCCCEEeCCCCCCC
Q 046340 33 SPHIGNLSFLRVLDLKNNSFR 53 (715)
Q Consensus 33 ~~~~~~l~~L~~L~Ls~n~i~ 53 (715)
|-.+.-+..|+.|.|.++.|.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~ 122 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLS 122 (1096)
T ss_pred CceeccccceeeEEecCcchh
Confidence 445566677777777777654
No 70
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=98.38 E-value=1.8e-07 Score=95.34 Aligned_cols=66 Identities=33% Similarity=0.592 Sum_probs=52.9
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC--cchHHHHHHHHHHhcCCCCCcceEEEE
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR--GASKSFMAQCQALRSVRHRNLVKIITS 713 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~--~~~~~~~~e~~~l~~~~h~niv~l~g~ 713 (715)
++|..-+.||+|+||.||||+-++ ++..||+|-+.+..+ +..+...+|++++++++|||||+|+..
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~--t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~es 69 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKY--TIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLES 69 (808)
T ss_pred cchhHHHHhcCCccceeeeccccc--ceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHh
Confidence 356666789999999999999654 456999999975433 334568999999999999999998764
No 71
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.38 E-value=7.6e-09 Score=96.76 Aligned_cols=177 Identities=19% Similarity=0.166 Sum_probs=101.8
Q ss_pred CCCEEEeeCcccccc-CCccccCCCCCCEEEeecccceecccc-ccCcCCCcEEEcccCC-CCCCCCCCccccccccccC
Q 046340 210 NLEVLNVGGNQFTGP-IPASISNASNLMRLTIAKNGFSGRVPS-LENLYKLQWVSISHNH-LGNYGEKDNLEFVNSLVNA 286 (715)
Q Consensus 210 ~L~~L~L~~n~l~~~-~~~~l~~~~~L~~L~L~~n~~~~~~~~-~~~l~~L~~L~l~~n~-l~~~~~~~~~~~~~~l~~~ 286 (715)
.|+.+||++..++.. ....++.|.+|+.|.+.++.+.+.+.. +..-.+|+.|+++.+. ++. ...--.+..|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~------n~~~ll~~sc 259 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTE------NALQLLLSSC 259 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccch------hHHHHHHHhh
Confidence 467777777666522 223456677777777777777654443 6666777777776652 211 1122235567
Q ss_pred CCCCEEEccCCccccc-CChhHhhccccCcEEEccccceee---cCCccccCCCCCCEEEcCCce-eeeecCccccCCCC
Q 046340 287 SRLELLEISDNNFGGM-LPEAVGNLSTRLRKLIVGNNQLFG---NIPSGLRNLVNLELLHLGGNQ-FTGQIPGSIGDLHK 361 (715)
Q Consensus 287 ~~L~~L~ls~n~i~~~-~~~~~~~~~~~L~~L~l~~n~i~~---~~~~~~~~l~~L~~L~L~~n~-i~~~~~~~~~~l~~ 361 (715)
+.|..|+++.|.+... ....+......|+.|+|++++-.- .+..--.++++|..|||++|. ++......|-+++.
T Consensus 260 s~L~~LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~ 339 (419)
T KOG2120|consen 260 SRLDELNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNY 339 (419)
T ss_pred hhHhhcCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcch
Confidence 7777777777765432 333344555668888888765321 111122567788888887764 33323344556677
Q ss_pred ccEEEccCCcccccCCcc---ccCCCCCCeEeccCC
Q 046340 362 LQWLMLPANEFWGEIPSS---IGNLTSLAILAFDEN 394 (715)
Q Consensus 362 L~~L~L~~n~i~~~~~~~---~~~l~~L~~L~l~~n 394 (715)
|++|.++.|. +++|.. +...|+|.+|++.++
T Consensus 340 L~~lSlsRCY--~i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 340 LQHLSLSRCY--DIIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred heeeehhhhc--CCChHHeeeeccCcceEEEEeccc
Confidence 7777777764 344443 334455666655443
No 72
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.33 E-value=9e-07 Score=88.61 Aligned_cols=70 Identities=26% Similarity=0.360 Sum_probs=56.0
Q ss_pred HHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCc--------------chHHHHHHHHHHhcCCCCCc
Q 046340 642 IKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRG--------------ASKSFMAQCQALRSVRHRNL 707 (715)
Q Consensus 642 ~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~--------------~~~~~~~e~~~l~~~~h~ni 707 (715)
.+..+.|.....||+|.||.|.+|+-... +..||||++....+. ..+++.+||.+|.+++||||
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~--~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nV 170 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVD--GKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNV 170 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCC--CcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCe
Confidence 34467899999999999999999985433 459999999643211 13578999999999999999
Q ss_pred ceEEEE
Q 046340 708 VKIITS 713 (715)
Q Consensus 708 v~l~g~ 713 (715)
|+|+.+
T Consensus 171 V~LiEv 176 (576)
T KOG0585|consen 171 VKLIEV 176 (576)
T ss_pred eEEEEe
Confidence 999875
No 73
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=98.33 E-value=6.8e-07 Score=87.90 Aligned_cols=67 Identities=22% Similarity=0.403 Sum_probs=52.2
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCc-------chHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRG-------ASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~-------~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..|...+.+|+|+||.|-.|.-+ ++++.||||++...... .....++|+++|.+++|||||+++++.
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~--~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f 245 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEK--KTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFF 245 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEc--ccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeee
Confidence 34566789999999999999844 45669999999643211 112357999999999999999999874
No 74
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=98.32 E-value=8.7e-07 Score=88.48 Aligned_cols=72 Identities=18% Similarity=0.224 Sum_probs=60.3
Q ss_pred HHHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 641 LIKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 641 ~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
++.++.++.....||+|+||.||+|+..+++. .||+|.+........+.+.+|+.++++++|+|||+++|+|
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~--~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 74 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQV--RIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSD 74 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCc--EEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeee
Confidence 45667777777899999999999999765533 8999998765544556799999999999999999999986
No 75
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=98.31 E-value=8.1e-07 Score=88.14 Aligned_cols=64 Identities=38% Similarity=0.635 Sum_probs=52.7
Q ss_pred ccccCcCCCceEEEEEEC--CCCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 651 ENLIGAGSFGSVYKGILN--HDDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 651 ~~~lg~g~~g~vy~~~~~--~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+.||.|.||.||+|++. ....+..||||.+..... ...++|.+|+..+++++|||||+++|+|
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~ 70 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFC 70 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEE
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccc
Confidence 477999999999999998 334556899999965432 2357899999999999999999999998
No 76
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.29 E-value=8.3e-08 Score=89.95 Aligned_cols=186 Identities=22% Similarity=0.255 Sum_probs=93.0
Q ss_pred CCCCCEEEcCCceeee--ecCccccCCCCccEEEccCCcccccCCccccCCCCCCeEeccCCccccc-CCcccccCCCCC
Q 046340 335 LVNLELLHLGGNQFTG--QIPGSIGDLHKLQWLMLPANEFWGEIPSSIGNLTSLAILAFDENMLEGS-IPSSLGKCQNLI 411 (715)
Q Consensus 335 l~~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~-~~~~~~~~~~L~ 411 (715)
++.++.|||.+|.|++ .+...+.++|.|++|+++.|++...+...-....+|+.|-+.+..+.-. ....+..+|.++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 4455666666666552 1223345566666666666665433322212344556665555544321 122334566666
Q ss_pred EEeCcCcccccccCccccccccccceEEccCCcccccCC--cCCcCCCCCCceeccCCcCccccChhhhcCccccccccc
Q 046340 412 LLDLSNNNLSGTIPTEVIGLSSLSIYLDLSQNQLNGSLP--PNFGILKNLGGIDISENKLSGEIPNSLGSCIRLEELVMK 489 (715)
Q Consensus 412 ~L~L~~n~l~~~~~~~~~~~~~l~~~L~Ls~n~i~~~~~--~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 489 (715)
+|+|+.|.+.. +++..|-+....+ ..+...+.+..+.++-|++... ++++..+-+.
T Consensus 150 elHmS~N~~rq---------------~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~-------Fpnv~sv~v~ 207 (418)
T KOG2982|consen 150 ELHMSDNSLRQ---------------LNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRI-------FPNVNSVFVC 207 (418)
T ss_pred hhhhccchhhh---------------hccccccccccchhhhhhhcCCcHHHHHHHHHhHHhh-------cccchheeee
Confidence 66666664431 1111221111110 0112223333334444444422 3455556666
Q ss_pred CCccccc-CcccCCCCCCCCEEeCCCCcccccC-CccccCCCCCCEEeCCCCccc
Q 046340 490 GNFFQGN-IPSSFSSLRGMQNLDLSRNNLSGRI-PKYFENFFFLQNLNLSSNHFE 542 (715)
Q Consensus 490 ~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~~~~L~~L~ls~N~l~ 542 (715)
.|.+... ....+..++.+..|+|+.|+|..-. -+.+.+++.|..|.+++|++.
T Consensus 208 e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 208 EGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred cCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 6666543 3444556667777777777775432 255667777777777777775
No 77
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=98.27 E-value=6.9e-07 Score=77.33 Aligned_cols=65 Identities=25% Similarity=0.498 Sum_probs=51.5
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEE
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITS 713 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~ 713 (715)
+|...++||+|.||+||+|+-+++ +..||+|+.+... ..-.....|||-+++.++|+|||+++.+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t--~eivalkrvrlddddegvpssalreicllkelkhknivrl~dv 69 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRET--HEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCc--cceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhh
Confidence 345567899999999999995544 4589999997543 2224578999999999999999998753
No 78
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=98.24 E-value=1.9e-06 Score=88.37 Aligned_cols=70 Identities=26% Similarity=0.499 Sum_probs=55.8
Q ss_pred cCCccccccCcCCCceEEEEEECCCCc--eeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEeC
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDH--ETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSCA 715 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~--~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~~ 715 (715)
.+|...+.||+|+||.||+|++...+. ...||+|.++... ....++|.+|+.+++.++|||||+++|+|.
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~ 79 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 79 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEc
Confidence 468888999999999999999754322 2358999996443 233467899999999999999999999973
No 79
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=98.23 E-value=2.1e-06 Score=87.57 Aligned_cols=69 Identities=23% Similarity=0.468 Sum_probs=54.4
Q ss_pred cCCccccccCcCCCceEEEEEECCC--------------CceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceE
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHD--------------DHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKI 710 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~--------------~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l 710 (715)
..|...+.||+|+||.||+|.+.++ ..+..||+|.+..... ....+|.+|+.++.+++|||||++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 4567778999999999999986432 1234799999975432 224579999999999999999999
Q ss_pred EEEe
Q 046340 711 ITSC 714 (715)
Q Consensus 711 ~g~~ 714 (715)
+|++
T Consensus 85 ~~~~ 88 (304)
T cd05096 85 LGVC 88 (304)
T ss_pred EEEE
Confidence 9986
No 80
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=98.22 E-value=1.6e-06 Score=91.09 Aligned_cols=70 Identities=27% Similarity=0.488 Sum_probs=55.1
Q ss_pred hcCCccccccCcCCCceEEEEEEC---CCCceeEEEEEEeeccC-CcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILN---HDDHETLVAVKVLNLQH-RGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~---~~~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
.++|...+.||+|+||.||+|++. ..+.+..||||+++... ....+.+.+|+.+++.+ +|||||+++|+|
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~ 108 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGAC 108 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeee
Confidence 446777899999999999999852 22234589999997443 22345688999999999 899999999987
No 81
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=98.20 E-value=2.1e-06 Score=90.54 Aligned_cols=73 Identities=27% Similarity=0.494 Sum_probs=56.8
Q ss_pred HHhhcCCccccccCcCCCceEEEEEECCC---CceeEEEEEEeeccCCc-chHHHHHHHHHHhcCC-CCCcceEEEEe
Q 046340 642 IKATDGFSLENLIGAGSFGSVYKGILNHD---DHETLVAVKVLNLQHRG-ASKSFMAQCQALRSVR-HRNLVKIITSC 714 (715)
Q Consensus 642 ~~~~~~f~~~~~lg~g~~g~vy~~~~~~~---~~~~~~avk~l~~~~~~-~~~~~~~e~~~l~~~~-h~niv~l~g~~ 714 (715)
+.....|...+.||+|+||.||+|+.... ..+..||||+++..... ..+.|.+|+.+++++. |||||+++|+|
T Consensus 33 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~ 110 (400)
T cd05105 33 EFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGAC 110 (400)
T ss_pred eccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence 34456778889999999999999986422 12346999999754332 2357899999999996 99999999997
No 82
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.20 E-value=1.4e-06 Score=89.32 Aligned_cols=65 Identities=28% Similarity=0.402 Sum_probs=53.7
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCc---chHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRG---ASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~---~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|...+.||+|+||.||-++-..+. ..||||++.-..++ .|.+..+|+..+.+++|||+|...||+
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~--evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCy 95 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNS--EVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCY 95 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCcc--ceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCccccccee
Confidence 555689999999999999854443 38999999754433 366899999999999999999999987
No 83
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=98.20 E-value=1.2e-06 Score=90.74 Aligned_cols=71 Identities=27% Similarity=0.457 Sum_probs=55.5
Q ss_pred hhcCCccccccCcCCCceEEEEEECC---CCceeEEEEEEeeccCC-cchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 644 ATDGFSLENLIGAGSFGSVYKGILNH---DDHETLVAVKVLNLQHR-GASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 644 ~~~~f~~~~~lg~g~~g~vy~~~~~~---~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
+.++|...+.||+|+||.||+|.... ...+..||||++..... ...+.+.+|+.++.++ +|||||+++|+|
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 80 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGAC 80 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEe
Confidence 44577888999999999999998521 22334799999975432 2235689999999999 999999999986
No 84
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.18 E-value=6.7e-07 Score=99.48 Aligned_cols=69 Identities=25% Similarity=0.337 Sum_probs=54.7
Q ss_pred hhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 644 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 644 ~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
-..+|+....+|+||||.||+++-+-+ |+.||||+++-.. .+......+|+.++++++|||||+.+.++
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlD--Gr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAW 546 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLD--GREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAW 546 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeeccc--chhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhh
Confidence 356788889999999999999994322 3489999997543 22335688999999999999999998764
No 85
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.18 E-value=1.6e-07 Score=88.09 Aligned_cols=79 Identities=19% Similarity=0.233 Sum_probs=45.7
Q ss_pred cCcEEEccccceeec-CCccccCCCCCCEEEcCCceeeee-cCccccCCCCccEEEccCCcccccCCc------cccCCC
Q 046340 313 RLRKLIVGNNQLFGN-IPSGLRNLVNLELLHLGGNQFTGQ-IPGSIGDLHKLQWLMLPANEFWGEIPS------SIGNLT 384 (715)
Q Consensus 313 ~L~~L~l~~n~i~~~-~~~~~~~l~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~n~i~~~~~~------~~~~l~ 384 (715)
++..+.+..|.+... ....+..++.+-.|+|+.|+|.+- .-+.+.+++.|..|.++++.+++.... .++.++
T Consensus 200 nv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaRL~ 279 (418)
T KOG2982|consen 200 NVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIARLT 279 (418)
T ss_pred cchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEeecc
Confidence 356666666655332 223445556666777777776532 224566777777777777776553322 234566
Q ss_pred CCCeEec
Q 046340 385 SLAILAF 391 (715)
Q Consensus 385 ~L~~L~l 391 (715)
+++.|+=
T Consensus 280 ~v~vLNG 286 (418)
T KOG2982|consen 280 KVQVLNG 286 (418)
T ss_pred ceEEecC
Confidence 6666653
No 86
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=98.18 E-value=3.4e-06 Score=84.99 Aligned_cols=68 Identities=29% Similarity=0.454 Sum_probs=55.3
Q ss_pred CCccccccCcCCCceEEEEEEC--CCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILN--HDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~--~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.|...+.||+|+||.||+|.+. +...+..||+|.+........+.|.+|+.++++++|||||+++|+|
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 74 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVC 74 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEE
Confidence 4666788999999999999864 2223458999999765544456799999999999999999999976
No 87
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=98.18 E-value=3.8e-06 Score=81.94 Aligned_cols=65 Identities=23% Similarity=0.326 Sum_probs=53.5
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
++..+.||+|+.|+|||+.++.++ +.+|+|.+..... ...++..+|++++++++||+||++||++
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~--~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF 146 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTG--KIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAF 146 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCC--eEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEE
Confidence 344488999999999999987664 4899999954332 2346789999999999999999999986
No 88
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.17 E-value=7.2e-08 Score=79.71 Aligned_cols=133 Identities=20% Similarity=0.194 Sum_probs=62.4
Q ss_pred CCCEEeCcCcccccccCccccc---cccccceEEccCCcccccCCcCCcCCCCCCceeccCCcCccccChhhhcCccccc
Q 046340 409 NLILLDLSNNNLSGTIPTEVIG---LSSLSIYLDLSQNQLNGSLPPNFGILKNLGGIDISENKLSGEIPNSLGSCIRLEE 485 (715)
Q Consensus 409 ~L~~L~L~~n~l~~~~~~~~~~---~~~l~~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 485 (715)
.+..++|++|++. .+++.... ...+ ...+|++|.+.+..+..-...+.++.|++++|.|+ ..|..+..++.|+.
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el-~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~ 104 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYEL-TKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRS 104 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceE-EEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhh
Confidence 3455566666554 22322222 2222 33455555555332222223345555666666665 34444566666666
Q ss_pred ccccCCcccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCCEEeCCCCcccccCC
Q 046340 486 LVMKGNFFQGNIPSSFSSLRGMQNLDLSRNNLSGRIPKYFENFFFLQNLNLSSNHFEGEVP 546 (715)
Q Consensus 486 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~ls~N~l~~~~~ 546 (715)
|+++.|.+. ..|..+..+.++-.|+..+|.+..++-+.|. ....-..++++++|.+..+
T Consensus 105 lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~eid~dl~~-s~~~al~~lgnepl~~~~~ 163 (177)
T KOG4579|consen 105 LNLRFNPLN-AEPRVIAPLIKLDMLDSPENARAEIDVDLFY-SSLPALIKLGNEPLGDETK 163 (177)
T ss_pred cccccCccc-cchHHHHHHHhHHHhcCCCCccccCcHHHhc-cccHHHHHhcCCcccccCc
Confidence 666666655 3344444455555566555555444333221 1222223345555554443
No 89
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=98.17 E-value=2.6e-06 Score=89.75 Aligned_cols=74 Identities=24% Similarity=0.463 Sum_probs=57.0
Q ss_pred HHHhhcCCccccccCcCCCceEEEEEECC---CCceeEEEEEEeeccCCc-chHHHHHHHHHHhcCC-CCCcceEEEEe
Q 046340 641 LIKATDGFSLENLIGAGSFGSVYKGILNH---DDHETLVAVKVLNLQHRG-ASKSFMAQCQALRSVR-HRNLVKIITSC 714 (715)
Q Consensus 641 ~~~~~~~f~~~~~lg~g~~g~vy~~~~~~---~~~~~~~avk~l~~~~~~-~~~~~~~e~~~l~~~~-h~niv~l~g~~ 714 (715)
++....++...+.||+|+||.||+|++.+ ...+..||||+++..... ..+.+.+|+.++.++. |||||+++|+|
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~ 110 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGAC 110 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEE
Confidence 34445567777999999999999999753 123347999999754322 2346889999999997 99999999987
No 90
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=98.15 E-value=4.4e-06 Score=83.58 Aligned_cols=66 Identities=33% Similarity=0.645 Sum_probs=53.3
Q ss_pred ccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 649 SLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 649 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
...+.||+|+||.||+|+.........||+|.++... ....+.|.+|+.++++++||||++++|+|
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 69 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVC 69 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence 3457899999999999998665443468999986532 23346789999999999999999999986
No 91
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=98.15 E-value=3.9e-06 Score=83.66 Aligned_cols=69 Identities=25% Similarity=0.480 Sum_probs=55.1
Q ss_pred cCCccccccCcCCCceEEEEEECC-CCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNH-DDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~-~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|...+.||+|+||.||+|.+.. +..+..||+|+++.... ...+.|.+|+.++++++|||||+++|++
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 75 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVI 75 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEE
Confidence 457778899999999999998642 22345899999975432 2345789999999999999999999986
No 92
>PHA02988 hypothetical protein; Provisional
Probab=98.15 E-value=3.7e-06 Score=84.58 Aligned_cols=59 Identities=27% Similarity=0.405 Sum_probs=49.5
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcc---hHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGA---SKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~---~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..||+|++|.||+|.+.+. .||||+++...... .+.|.+|+.+|.+++|||||+++|++
T Consensus 26 ~~i~~g~~~~v~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~ 87 (283)
T PHA02988 26 VLIKENDQNSIYKGIFNNK----EVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFI 87 (283)
T ss_pred eEEeeCCceEEEEEEECCE----EEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeE
Confidence 6789999999999998433 89999997543322 35688999999999999999999986
No 93
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.14 E-value=2.5e-07 Score=85.67 Aligned_cols=113 Identities=22% Similarity=0.163 Sum_probs=52.1
Q ss_pred cCCCCCEEEccCCcccccCCh---hHhhccccCcEEEccccceeecCCc-----cccCCCCCCEEEcCCceeeeec----
Q 046340 285 NASRLELLEISDNNFGGMLPE---AVGNLSTRLRKLIVGNNQLFGNIPS-----GLRNLVNLELLHLGGNQFTGQI---- 352 (715)
Q Consensus 285 ~~~~L~~L~ls~n~i~~~~~~---~~~~~~~~L~~L~l~~n~i~~~~~~-----~~~~l~~L~~L~L~~n~i~~~~---- 352 (715)
.-|.|+......|++..-.-. ........|+++.+..|.|.-.... .+..+.+|+.|||+.|.++...
T Consensus 155 ~kp~Le~vicgrNRlengs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~L 234 (388)
T COG5238 155 DKPKLEVVICGRNRLENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYL 234 (388)
T ss_pred cCCCceEEEeccchhccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHH
Confidence 345566666666655421111 1111123466666666655422111 1234466666777766665322
Q ss_pred CccccCCCCccEEEccCCcccccCCccc------cCCCCCCeEeccCCccc
Q 046340 353 PGSIGDLHKLQWLMLPANEFWGEIPSSI------GNLTSLAILAFDENMLE 397 (715)
Q Consensus 353 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~------~~l~~L~~L~l~~n~i~ 397 (715)
...+..++.|++|.+..|-++.....++ ...++|..|...+|.+.
T Consensus 235 a~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~ 285 (388)
T COG5238 235 ADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERR 285 (388)
T ss_pred HHHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhc
Confidence 2233445556666666655543322211 11345555555555443
No 94
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.14 E-value=1.9e-06 Score=85.53 Aligned_cols=68 Identities=28% Similarity=0.441 Sum_probs=56.2
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
...|...+.||+|+||.||||.-. .++..||+|.+.... ....++.++|+.++++++++||.+.||.+
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~--~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsy 80 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDN--KTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSY 80 (467)
T ss_pred ccccccchhccccccceeeeeeec--cccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhhe
Confidence 345667789999999999999954 445589999997543 44568899999999999999999998875
No 95
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=98.13 E-value=8.6e-07 Score=93.27 Aligned_cols=64 Identities=28% Similarity=0.555 Sum_probs=51.4
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEE
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITS 713 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~ 713 (715)
+.-++.+|+|+||.||+|+.+. +|..||||...... ....+...+|+++|++++|||||++.|.
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnke--tG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~i 79 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKE--TGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDI 79 (732)
T ss_pred eeehhhhcCCccceeeeecccc--cccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhccc
Confidence 3446789999999999999544 45699999997654 3334567899999999999999998764
No 96
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=98.12 E-value=5.9e-06 Score=83.46 Aligned_cols=67 Identities=25% Similarity=0.514 Sum_probs=54.6
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
++|...+.||+|+||.||+|+...++ ..||+|.++... ......+.+|+.++++++|||||++++++
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 72 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTE--NLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDII 72 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCC--CEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEE
Confidence 46777899999999999999976543 489999996433 22345678999999999999999999874
No 97
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.09 E-value=2.6e-07 Score=85.56 Aligned_cols=215 Identities=20% Similarity=0.206 Sum_probs=107.7
Q ss_pred cccCCCCCEEEccCCcccccCChhHhhccc---cCcEEEccccce---ee-------cCCccccCCCCCCEEEcCCceee
Q 046340 283 LVNASRLELLEISDNNFGGMLPEAVGNLST---RLRKLIVGNNQL---FG-------NIPSGLRNLVNLELLHLGGNQFT 349 (715)
Q Consensus 283 l~~~~~L~~L~ls~n~i~~~~~~~~~~~~~---~L~~L~l~~n~i---~~-------~~~~~~~~l~~L~~L~L~~n~i~ 349 (715)
+.-+..++.++||+|.|....-.+++.... +|+..++++-.. .+ ....++.+|+.|+..+|+.|.+.
T Consensus 26 l~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg 105 (388)
T COG5238 26 LEMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFG 105 (388)
T ss_pred HHhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccC
Confidence 334555666666666665443333333221 244444433211 11 12234667888999999998886
Q ss_pred eecCc----cccCCCCccEEEccCCcccccCCccc-------------cCCCCCCeEeccCCcccccCC----cccccCC
Q 046340 350 GQIPG----SIGDLHKLQWLMLPANEFWGEIPSSI-------------GNLTSLAILAFDENMLEGSIP----SSLGKCQ 408 (715)
Q Consensus 350 ~~~~~----~~~~l~~L~~L~L~~n~i~~~~~~~~-------------~~l~~L~~L~l~~n~i~~~~~----~~~~~~~ 408 (715)
...|. .+++-+.|++|.|++|.+......-+ .+-|.|+...+..|++..-.. ..+..-.
T Consensus 106 ~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlengs~~~~a~~l~sh~ 185 (388)
T COG5238 106 SEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLENGSKELSAALLESHE 185 (388)
T ss_pred cccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhccCcHHHHHHHHHhhc
Confidence 54443 44566788888888887632222212 234667777777777652211 1122224
Q ss_pred CCCEEeCcCcccccccCccccccccccceEEccCCcccccCCcCCcCCCCCCceeccCCcCccc----cChhhhcCcccc
Q 046340 409 NLILLDLSNNNLSGTIPTEVIGLSSLSIYLDLSQNQLNGSLPPNFGILKNLGGIDISENKLSGE----IPNSLGSCIRLE 484 (715)
Q Consensus 409 ~L~~L~L~~n~l~~~~~~~~~~~~~l~~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~ 484 (715)
.|+.+.+..|.|. |..+..+.. ..+..+.+|+.|||++|-++-. ...++...+.|+
T Consensus 186 ~lk~vki~qNgIr---pegv~~L~~-----------------~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lr 245 (388)
T COG5238 186 NLKEVKIQQNGIR---PEGVTMLAF-----------------LGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLR 245 (388)
T ss_pred CceeEEeeecCcC---cchhHHHHH-----------------HHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhh
Confidence 6666666666665 222111100 1123345566666666655422 122233444566
Q ss_pred cccccCCcccccCcccC----C--CCCCCCEEeCCCCcc
Q 046340 485 ELVMKGNFFQGNIPSSF----S--SLRGMQNLDLSRNNL 517 (715)
Q Consensus 485 ~L~L~~n~l~~~~~~~~----~--~l~~L~~L~L~~N~l 517 (715)
+|.+.+|-++.....++ . ..++|..|-..+|..
T Consensus 246 EL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~ 284 (388)
T COG5238 246 ELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNER 284 (388)
T ss_pred hccccchhhccccHHHHHHHhhhhcCCCccccccchhhh
Confidence 66666665543322211 1 224555555555544
No 98
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=98.09 E-value=8e-06 Score=81.55 Aligned_cols=63 Identities=32% Similarity=0.511 Sum_probs=51.2
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|++.++.....+|+|.++.... .....|.+|+.++++++|||||+++|+|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 64 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQC 64 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 35899999999999986654555799999875432 2234788999999999999999999986
No 99
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=98.07 E-value=7.9e-06 Score=72.78 Aligned_cols=80 Identities=26% Similarity=0.255 Sum_probs=39.3
Q ss_pred CCEEeCCCCCCCccCChhhc-CCCCCcEEecCCCcCcccCCccccCCCCCCEEEccCCcCccCccccccCCCCCCEEEee
Q 046340 42 LRVLDLKNNSFRDEIPQEIG-YLFRLQILALHNNTFGGQIPDNISHCVNLESLGLGVNELVGKVPGKLGSLSKLWILSVH 120 (715)
Q Consensus 42 L~~L~Ls~n~i~~~~~~~~~-~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 120 (715)
=+++||.+.++..+.. ++ -+.+...+||++|.+. ..+.|.+++.|.+|.+++|+|+.+.|..-.-+++|+.|.|.
T Consensus 21 e~e~~LR~lkip~ien--lg~~~d~~d~iDLtdNdl~--~l~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~Lt 96 (233)
T KOG1644|consen 21 ERELDLRGLKIPVIEN--LGATLDQFDAIDLTDNDLR--KLDNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILT 96 (233)
T ss_pred ccccccccccccchhh--ccccccccceecccccchh--hcccCCCccccceEEecCCcceeeccchhhhccccceEEec
Confidence 3455665555432111 11 1334555566655554 22335555555555555555555555444444555555555
Q ss_pred ccccc
Q 046340 121 YNSLS 125 (715)
Q Consensus 121 ~n~l~ 125 (715)
+|+|.
T Consensus 97 nNsi~ 101 (233)
T KOG1644|consen 97 NNSIQ 101 (233)
T ss_pred Ccchh
Confidence 55543
No 100
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=98.07 E-value=6.2e-06 Score=84.98 Aligned_cols=68 Identities=21% Similarity=0.306 Sum_probs=55.6
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..+|...+.||+|+||.||+|+....+. .||||.+.... ....+.+.+|+.++.+++|||||++++++
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~ 87 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGE--YYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSF 87 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCC--EEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 4567888999999999999999865533 89999996432 22345688999999999999999999875
No 101
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=98.07 E-value=8.3e-06 Score=81.62 Aligned_cols=67 Identities=33% Similarity=0.666 Sum_probs=53.0
Q ss_pred CccccccCcCCCceEEEEEECCCC-ceeEEEEEEeeccCC--cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDD-HETLVAVKVLNLQHR--GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~-~~~~~avk~l~~~~~--~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|...+.||+|+||.||+|++.... .+..||+|+++.... .....+.+|+..+++++||||++++|++
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 70 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVC 70 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeee
Confidence 345688999999999999975432 335799999974322 2235789999999999999999999976
No 102
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=98.06 E-value=4.5e-06 Score=83.55 Aligned_cols=62 Identities=27% Similarity=0.479 Sum_probs=48.9
Q ss_pred ccCcCCCceEEEEEECC----------------------CCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceE
Q 046340 653 LIGAGSFGSVYKGILNH----------------------DDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKI 710 (715)
Q Consensus 653 ~lg~g~~g~vy~~~~~~----------------------~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l 710 (715)
.||+|+||.||+|.+.. ......||+|.+..........|.+|+.++++++|||||++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 58999999999998631 11224689999975544344678899999999999999999
Q ss_pred EEEe
Q 046340 711 ITSC 714 (715)
Q Consensus 711 ~g~~ 714 (715)
+|+|
T Consensus 82 ~~~~ 85 (274)
T cd05076 82 HGVC 85 (274)
T ss_pred EEEE
Confidence 9987
No 103
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=98.06 E-value=8.2e-06 Score=81.32 Aligned_cols=69 Identities=25% Similarity=0.443 Sum_probs=55.3
Q ss_pred cCCccccccCcCCCceEEEEEECCC-CceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHD-DHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~-~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
++|...+.||+|+||.||+|++... .....||||.++.... ....+|.+|+.++++++||||++++|++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 74 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVV 74 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEE
Confidence 4678889999999999999998543 2234799999875432 2345789999999999999999999875
No 104
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=98.06 E-value=3.7e-06 Score=83.58 Aligned_cols=70 Identities=30% Similarity=0.629 Sum_probs=59.1
Q ss_pred HHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 642 IKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 642 ~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+++..+|...+.||+|+||.||+|...++ . .+|+|.+.........++.+|+.++++++||||+++++++
T Consensus 2 ~~~~~~y~~~~~ig~g~~~~vy~~~~~~~-~--~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 71 (261)
T cd05148 2 ERPREEFTLERKLGSGYFGEVWEGLWKNR-V--RVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVC 71 (261)
T ss_pred cCcHHHHHHhhhhccCCCccEEEeEecCC-C--cEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeE
Confidence 45667788889999999999999998763 3 7999999765544456799999999999999999999876
No 105
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=98.06 E-value=9.5e-06 Score=80.90 Aligned_cols=68 Identities=25% Similarity=0.425 Sum_probs=55.8
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..+|...+.||+|+||.||+|+...++ ..||+|.+..........+.+|+.++.+++||||+++++++
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~--~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~ 75 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTG--ELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSY 75 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCC--eEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEE
Confidence 346778899999999999999975543 48999999755444445688999999999999999999876
No 106
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=98.06 E-value=4.9e-06 Score=87.28 Aligned_cols=74 Identities=26% Similarity=0.483 Sum_probs=56.6
Q ss_pred HHHhhcCCccccccCcCCCceEEEEEECC---CCceeEEEEEEeeccCC-cchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 641 LIKATDGFSLENLIGAGSFGSVYKGILNH---DDHETLVAVKVLNLQHR-GASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 641 ~~~~~~~f~~~~~lg~g~~g~vy~~~~~~---~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
|.....+|...+.||+|+||.||+|+... .+.+..||||++..... ...+.+.+|+.+++.+ +|||||+++|+|
T Consensus 33 ~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~ 111 (374)
T cd05106 33 WEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGAC 111 (374)
T ss_pred ccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEe
Confidence 33444578888999999999999998532 12334799999975432 2235688999999999 899999999987
No 107
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.06 E-value=7.1e-06 Score=84.56 Aligned_cols=68 Identities=22% Similarity=0.347 Sum_probs=56.1
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCc---chHHHHHHHHHHhcCC-CCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRG---ASKSFMAQCQALRSVR-HRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~---~~~~~~~e~~~l~~~~-h~niv~l~g~~ 714 (715)
...|...+.||+|.||.||+++.+.+ +..+|+|.+...... ..+++.+|+.+|+++. |||||.+++++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~t--g~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~ 105 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKST--GKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAF 105 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCC--CceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence 45577779999999999999997765 448999999755432 2358999999999998 99999999875
No 108
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=98.05 E-value=3.3e-06 Score=82.31 Aligned_cols=69 Identities=29% Similarity=0.462 Sum_probs=56.5
Q ss_pred HhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEE
Q 046340 643 KATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITS 713 (715)
Q Consensus 643 ~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~ 713 (715)
....+|+..++||+|+||+||..+-.++ ++.+|+|.++... .+..+...+|..++.+++||.||+++..
T Consensus 22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt--~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ys 93 (357)
T KOG0598|consen 22 VGPDDFEILKVIGKGSFGKVFQVRKKDT--GKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYS 93 (357)
T ss_pred CChhheeeeeeeeccCCceEEEEEEccc--CceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEe
Confidence 3357899999999999999999997754 5599999997542 3345668899999999999999998753
No 109
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=98.05 E-value=7.6e-06 Score=85.29 Aligned_cols=67 Identities=31% Similarity=0.395 Sum_probs=53.4
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|...+.||+|+||.||+|+....+ ..||||.+..... ...+.+.+|++++++++|+|||++++++
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 141 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTG--RLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMF 141 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCC--CEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEe
Confidence 34455688999999999999976543 4899999965432 2235789999999999999999999875
No 110
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=98.05 E-value=8.8e-06 Score=83.99 Aligned_cols=68 Identities=21% Similarity=0.307 Sum_probs=55.9
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.++|+..+.||+|+||.||+++...++ ..+|+|.+..... ...+++.+|+.++++++|||||+++|+|
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~--~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 72 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSG--LIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 72 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCC--cEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEE
Confidence 357888899999999999999976543 4899999875432 2235689999999999999999999986
No 111
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=98.05 E-value=5.5e-06 Score=80.65 Aligned_cols=67 Identities=22% Similarity=0.442 Sum_probs=54.2
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC--cchHHHHHHHHHHhcCCCCC-cceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR--GASKSFMAQCQALRSVRHRN-LVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~--~~~~~~~~e~~~l~~~~h~n-iv~l~g~~ 714 (715)
..|...+++|+|.||+||+|+....+ ..||+|+++-... .-.....||+.++.+++|+| ||+++.++
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g--~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~ 80 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTG--KFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVI 80 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCC--CEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeee
Confidence 34555678999999999999976553 4899999976543 22356789999999999999 99999876
No 112
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=98.05 E-value=7.4e-06 Score=86.35 Aligned_cols=66 Identities=24% Similarity=0.275 Sum_probs=54.2
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.|...+.||+|+||.||+|+....+ ..||||.+.... ....+.+.+|+.++++++|||||++++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~--~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~ 70 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTH--ALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSF 70 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCC--CEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEE
Confidence 5677789999999999999976553 489999997432 22345688999999999999999999876
No 113
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=98.05 E-value=6.8e-06 Score=86.14 Aligned_cols=67 Identities=24% Similarity=0.276 Sum_probs=54.5
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
++|...+.||+|+||.||+|+...++ ..||||.+.... ......+.+|+.++.+++|||||++++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~ 70 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTG--HIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSF 70 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCC--CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE
Confidence 36778899999999999999976543 489999997432 22335678999999999999999999875
No 114
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=98.04 E-value=8.9e-06 Score=80.54 Aligned_cols=65 Identities=23% Similarity=0.443 Sum_probs=53.8
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|...+.||+|+||.||+|.+.++ . .+|+|.+.... ...++|.+|+.++++++||||++++++|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~-~--~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 68 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQ-I--KVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVC 68 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccC-c--eEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEE
Confidence 3566778899999999999998654 2 69999986432 2356799999999999999999999987
No 115
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=98.04 E-value=1.1e-05 Score=82.53 Aligned_cols=67 Identities=25% Similarity=0.507 Sum_probs=54.6
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
++|...+.||+|+||.||+|+...++ ..||+|.++... ......+.+|+.++++++||||+++++++
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 73 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTE--NLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIV 73 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCC--CeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEE
Confidence 45777889999999999999976543 389999997443 22334688999999999999999999986
No 116
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=98.04 E-value=1.2e-05 Score=79.69 Aligned_cols=62 Identities=26% Similarity=0.552 Sum_probs=50.4
Q ss_pred ccCcCCCceEEEEEECCCCceeEEEEEEeeccCC--cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 653 LIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR--GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 653 ~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~--~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.||+|+||.||+|.+...+.+..+|+|+++.... ...+++.+|+.++++++||||++++|+|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 65 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGIC 65 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence 5899999999999875444455899999864432 2345789999999999999999999986
No 117
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=98.03 E-value=1e-05 Score=82.33 Aligned_cols=68 Identities=29% Similarity=0.521 Sum_probs=54.9
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.++|...+.||+|+||.||+|+...++ ..||||.+..... .....+.+|+.++++++|||||++++++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 72 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNG--KLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDII 72 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCC--CEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEE
Confidence 357888899999999999999976443 3899999964432 2234678999999999999999999875
No 118
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=98.03 E-value=1.1e-05 Score=82.68 Aligned_cols=62 Identities=23% Similarity=0.335 Sum_probs=50.4
Q ss_pred ccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 651 ENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 651 ~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
...||+|+||.||+|+..++..+..||+|.++... ....+.+|+.++++++|||||++++++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~ 67 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVF 67 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeE
Confidence 36799999999999997654445589999996432 235678999999999999999998864
No 119
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=98.03 E-value=5.8e-06 Score=85.78 Aligned_cols=70 Identities=26% Similarity=0.427 Sum_probs=54.6
Q ss_pred hcCCccccccCcCCCceEEEEEECC---CCceeEEEEEEeeccCC-cchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNH---DDHETLVAVKVLNLQHR-GASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~---~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
.++|...+.||+|+||.||+|...+ ...+..||||+++.... .....+.+|+.++.++ +|||||+++|+|
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 80 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC 80 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhccee
Confidence 3467788999999999999998532 12345899999975432 2235688999999999 789999999976
No 120
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=98.02 E-value=7.9e-06 Score=84.48 Aligned_cols=69 Identities=22% Similarity=0.340 Sum_probs=55.1
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..+|...+.||+|+||.||+|+..+.. ...||+|++.... ....+.+.+|+.+++.++|||||+++|++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~ 100 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNED-FPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSF 100 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCC-CeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEE
Confidence 456778899999999999999875542 2379999996432 22345688999999999999999999986
No 121
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=98.02 E-value=1.2e-05 Score=82.51 Aligned_cols=61 Identities=25% Similarity=0.355 Sum_probs=50.8
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..||+|+||.||+|+..++..+..||+|.+.... ....+.+|+.++++++|||||++++++
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~ 67 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVF 67 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence 5799999999999998765555689999986432 234688999999999999999999875
No 122
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=98.02 E-value=1.1e-05 Score=83.35 Aligned_cols=68 Identities=21% Similarity=0.272 Sum_probs=55.8
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.++|+..+.||+|+||.||+++....+ ..||+|.+..... ...+.+.+|+.++++++|||||++++++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~--~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 72 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSG--LIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 72 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCC--cEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEE
Confidence 357888899999999999999976543 4899999975432 2235799999999999999999999986
No 123
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=98.01 E-value=1.2e-05 Score=80.43 Aligned_cols=67 Identities=30% Similarity=0.527 Sum_probs=52.8
Q ss_pred CccccccCcCCCceEEEEEECC-CCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNH-DDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~-~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|...+.||+|+||.||+|.+.. ...+..||||.+.... ....+++.+|+.++++++||||++++|++
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 70 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVS 70 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEE
Confidence 3456789999999999998753 2244689999996432 22345789999999999999999999975
No 124
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=98.01 E-value=9e-06 Score=80.77 Aligned_cols=67 Identities=34% Similarity=0.625 Sum_probs=55.5
Q ss_pred hhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 644 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 644 ~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..++|...+.||+|+||.||+|...++ ..||+|.++... ...++|.+|+.++++++||||+++++++
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~---~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 70 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNT---TPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVC 70 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCC---eEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEE
Confidence 345678889999999999999997544 279999997543 2356799999999999999999999986
No 125
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=98.01 E-value=1.5e-05 Score=69.33 Aligned_cols=106 Identities=19% Similarity=0.194 Sum_probs=39.3
Q ss_pred ccccCCCCCCEEeCCCCCCCccCChhhcCCCCCcEEecCCCcCcccCCccccCCCCCCEEEccCCcCccCccccccCCCC
Q 046340 34 PHIGNLSFLRVLDLKNNSFRDEIPQEIGYLFRLQILALHNNTFGGQIPDNISHCVNLESLGLGVNELVGKVPGKLGSLSK 113 (715)
Q Consensus 34 ~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 113 (715)
.+|.++++|+.+.+.. .++.+....|.++++|+.+.+..+ +......+|.++++|+.+.+.+ .+.......|..+++
T Consensus 6 ~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~ 82 (129)
T PF13306_consen 6 NAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTN 82 (129)
T ss_dssp TTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TT
T ss_pred HHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccccccccccccccc
Confidence 3455555555555543 344444444555555555555443 4333344444544455555543 232233344444445
Q ss_pred CCEEEeeccccccccCccccCCCCCCEEEcc
Q 046340 114 LWILSVHYNSLSGEIPSSFGNLSSLEFLSAA 144 (715)
Q Consensus 114 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~ 144 (715)
|+.+++..+ +.......|.++ +|+.+.+.
T Consensus 83 l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~ 111 (129)
T PF13306_consen 83 LKNIDIPSN-ITEIGSSSFSNC-NLKEINIP 111 (129)
T ss_dssp ECEEEETTT--BEEHTTTTTT--T--EEE-T
T ss_pred ccccccCcc-ccEEchhhhcCC-CceEEEEC
Confidence 554444432 332333344443 44444443
No 126
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=98.01 E-value=8e-06 Score=82.10 Aligned_cols=69 Identities=35% Similarity=0.564 Sum_probs=55.4
Q ss_pred cCCccccccCcCCCceEEEEEECCC---CceeEEEEEEeeccCCc-chHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHD---DHETLVAVKVLNLQHRG-ASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~---~~~~~~avk~l~~~~~~-~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|...+.||+|+||.||+|+..+. .....||||.++..... ..++|.+|++++.+++||||+++++++
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 77 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVC 77 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEE
Confidence 4567778999999999999987443 23347999999755433 346799999999999999999999986
No 127
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.01 E-value=1.9e-07 Score=77.22 Aligned_cols=106 Identities=24% Similarity=0.199 Sum_probs=60.6
Q ss_pred eEEEEcCCCCCCc--ccCccccCCCCCCEEeCCCCCCCccCChhhcCCCCCcEEecCCCcCcccCCccccCCCCCCEEEc
Q 046340 18 VTGLRLPSLLLQG--SLSPHIGNLSFLRVLDLKNNSFRDEIPQEIGYLFRLQILALHNNTFGGQIPDNISHCVNLESLGL 95 (715)
Q Consensus 18 v~~l~l~~~~l~~--~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 95 (715)
...++|+.|.+-- ..+..++...+|+..+|++|.+++..+..-..++-++.|+|++|+|+ .+|..++.++.|+.|++
T Consensus 29 ~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl 107 (177)
T KOG4579|consen 29 LHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNL 107 (177)
T ss_pred hhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhccc
Confidence 3445556554431 12334455566666677777666433333334556666666666666 45555666666666666
Q ss_pred cCCcCccCccccccCCCCCCEEEeeccccc
Q 046340 96 GVNELVGKVPGKLGSLSKLWILSVHYNSLS 125 (715)
Q Consensus 96 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 125 (715)
+.|.+. ..|..+..+.+|-.|+..+|.+.
T Consensus 108 ~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 108 RFNPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred ccCccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 666665 45555555666666666666544
No 128
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=98.00 E-value=9.9e-06 Score=81.02 Aligned_cols=70 Identities=26% Similarity=0.475 Sum_probs=57.6
Q ss_pred HHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 642 IKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 642 ~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
+.+.+.|+..+.||+|+||.||+|...+.+. .||+|.+.... .....+.+|+.++.++ +||||++++|++
T Consensus 2 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~--~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 72 (272)
T cd06637 2 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQ--LAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAF 72 (272)
T ss_pred CChhhhhhHHHheeecCCeEEEEEEEcCCCc--EEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEE
Confidence 3456778888999999999999999765544 89999997543 3346788999999998 799999999986
No 129
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=98.00 E-value=1.4e-05 Score=80.17 Aligned_cols=66 Identities=21% Similarity=0.334 Sum_probs=53.5
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||+|....+ +..||+|.+.... ....++|.+|+.++++++||||++++|++
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 68 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLT--RRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAF 68 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCC--CcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence 466678899999999999986544 3489999986442 22345788999999999999999999986
No 130
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=98.00 E-value=1.9e-05 Score=68.76 Aligned_cols=124 Identities=15% Similarity=0.156 Sum_probs=53.2
Q ss_pred ChhhcCCCCCcEEecCCCcCcccCCccccCCCCCCEEEccCCcCccCccccccCCCCCCEEEeeccccccccCccccCCC
Q 046340 57 PQEIGYLFRLQILALHNNTFGGQIPDNISHCVNLESLGLGVNELVGKVPGKLGSLSKLWILSVHYNSLSGEIPSSFGNLS 136 (715)
Q Consensus 57 ~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 136 (715)
...|.++++|+.+.+.. .+..+...+|.++++|+.+.+.++ +..+...+|.++++|+.+.+.. .+.......|..++
T Consensus 5 ~~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~ 81 (129)
T PF13306_consen 5 NNAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCT 81 (129)
T ss_dssp TTTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-T
T ss_pred HHHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccccc
Confidence 34566666677776663 455555556666666666666653 5545555666666666666654 33333444556666
Q ss_pred CCCEEEcccCcceecCCccccCCCCCCEEEeecccCcccCCccccCCCCC
Q 046340 137 SLEFLSAAANQFVGQFPETLSELKMMRYISFGENKLSGEIPFSIYNLSSL 186 (715)
Q Consensus 137 ~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L 186 (715)
+|+.+.+..+ +..+....|.++ .|+.+.+.. .+..+....|.++++|
T Consensus 82 ~l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 82 NLKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKL 128 (129)
T ss_dssp TECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG-----
T ss_pred cccccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccC
Confidence 6666666543 444444555554 555555544 2333334444444443
No 131
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=98.00 E-value=1.1e-05 Score=83.47 Aligned_cols=66 Identities=18% Similarity=0.367 Sum_probs=54.3
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||+|+....+. .||||+++... ......+.+|+.++.+++|||||++++++
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~ 70 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGE--IVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAF 70 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCC--EEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEE
Confidence 57778999999999999999865433 89999997432 22345688999999999999999999875
No 132
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=98.00 E-value=8.2e-06 Score=82.31 Aligned_cols=76 Identities=24% Similarity=0.467 Sum_probs=62.3
Q ss_pred chHHHHHHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 636 VSYQNLIKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 636 ~~~~~~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
+.++.+.++.++|+..+.||+|+||.||+++....+ ..+|+|.+.... ....++.+|+.++.++ +||||++++|+|
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~--~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 84 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNG--SKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMY 84 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCC--ceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeee
Confidence 555677788899999999999999999999976543 489999986432 2245688999999999 799999999976
No 133
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=98.00 E-value=1.5e-05 Score=79.63 Aligned_cols=63 Identities=27% Similarity=0.441 Sum_probs=49.9
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|+...+.....+|+|++..... .....|.+|+.+++.++||||++++|+|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~ 64 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQC 64 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence 35899999999999865543445789998864432 2335688999999999999999999986
No 134
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=97.99 E-value=1.4e-05 Score=79.27 Aligned_cols=62 Identities=26% Similarity=0.535 Sum_probs=49.9
Q ss_pred ccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 653 LIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 653 ~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.||+|+||.||+|.+...+.+..||+|.+..... ...+.|.+|+.++++++||||++++|+|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~ 64 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVC 64 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEE
Confidence 3899999999999876443444799999975432 2235699999999999999999999986
No 135
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=97.99 E-value=9.2e-06 Score=81.68 Aligned_cols=67 Identities=24% Similarity=0.482 Sum_probs=56.1
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
++|...+.||+|+||.||+|+...+. ..||+|..........+.|.+|++++++++||||++++|++
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~--~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 71 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETG--LFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAY 71 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCC--cEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEE
Confidence 45777788999999999999986543 48999999755444456799999999999999999999975
No 136
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=97.99 E-value=9.6e-06 Score=81.88 Aligned_cols=66 Identities=20% Similarity=0.417 Sum_probs=54.0
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||+|+...++. .||||++.... ....+.+.+|+.++++++|||||++++++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~--~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 69 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKE--IVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAF 69 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCc--EEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhE
Confidence 57778899999999999999865544 89999997432 22345688999999999999999998765
No 137
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=97.99 E-value=8.8e-06 Score=85.53 Aligned_cols=66 Identities=21% Similarity=0.252 Sum_probs=53.0
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|+..+.||+|+||.||+|+...+ +..||||++.... ....+.+.+|+++++.++|||||++++++
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 68 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRD--GKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDIL 68 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCC--CCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhhee
Confidence 477789999999999999996544 3489999986432 12345688999999999999999998875
No 138
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=97.98 E-value=6.6e-06 Score=83.21 Aligned_cols=66 Identities=17% Similarity=0.258 Sum_probs=53.0
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||+|+...++ ..||+|.+.... ....+.+.+|+.++++++||||+++++++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~ 70 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISE--HYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTE 70 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCC--CEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhh
Confidence 5777789999999999999976543 489999996432 22345688999999999999999988653
No 139
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=97.98 E-value=9.2e-06 Score=80.79 Aligned_cols=67 Identities=25% Similarity=0.601 Sum_probs=55.4
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEeC
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSCA 715 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~~ 715 (715)
.+|...+.||+|+||.||+|...+.+ ..||+|.+... ....+++.+|+.++++++||||++++++|.
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~--~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 72 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYS--LTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 72 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCC--ceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEc
Confidence 45777789999999999999986543 38999998643 233567999999999999999999999873
No 140
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=97.97 E-value=1e-05 Score=81.14 Aligned_cols=72 Identities=25% Similarity=0.456 Sum_probs=56.9
Q ss_pred HhhcCCccccccCcCCCceEEEEEECCC---CceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 643 KATDGFSLENLIGAGSFGSVYKGILNHD---DHETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 643 ~~~~~f~~~~~lg~g~~g~vy~~~~~~~---~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
...++|+..+.||+|+||.||+|...+. ..+..||||.+.... .....+|.+|+.++++++|||||++++++
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~ 78 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 78 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence 4567788899999999999999986421 233579999986432 22345689999999999999999999986
No 141
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=97.97 E-value=1.2e-05 Score=83.33 Aligned_cols=65 Identities=28% Similarity=0.465 Sum_probs=52.2
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|...+.||+|+||.||+|+.... +..||||++.... ......+.+|+.++++++|||||++++++
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 68 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHT--GEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIM 68 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCC--CCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceE
Confidence 56678899999999999996544 3489999986421 22335688999999999999999998875
No 142
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=97.97 E-value=1.3e-05 Score=80.62 Aligned_cols=69 Identities=26% Similarity=0.417 Sum_probs=54.1
Q ss_pred cCCccccccCcCCCceEEEEEEC--CCCceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILN--HDDHETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~--~~~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|+..+.||+|+||.||+|... +...+..||+|.+.... .....+|.+|++++++++|||||+++|++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 76 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVV 76 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEE
Confidence 35667789999999999999852 22234589999997432 23345789999999999999999999975
No 143
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=97.97 E-value=1.3e-05 Score=84.43 Aligned_cols=66 Identities=21% Similarity=0.234 Sum_probs=53.5
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||+++...++ ..||||.+.... ....+.+.+|+.++++++|||||++++++
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~ 70 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTG--KIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSF 70 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCC--CEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence 5777899999999999999976543 489999986432 22235688999999999999999999875
No 144
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=97.97 E-value=1.6e-05 Score=81.14 Aligned_cols=66 Identities=18% Similarity=0.264 Sum_probs=53.9
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||+++...+ +..+|+|.+..... ....++.+|++++.+++|||||+++|++
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~--~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 68 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPS--GLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAF 68 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCC--CeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 577889999999999999997654 34899999864322 2235688999999999999999999986
No 145
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=97.96 E-value=1.3e-05 Score=80.97 Aligned_cols=71 Identities=27% Similarity=0.446 Sum_probs=56.2
Q ss_pred hcCCccccccCcCCCceEEEEEECC---CCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEeC
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNH---DDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSCA 715 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~---~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~~ 715 (715)
..+|...+.||+|+||.||+++..+ +..+..||+|.+..... ...++|.+|+.++++++|||||+++|+|.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~ 78 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCA 78 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEc
Confidence 4568888999999999999998643 12345899999975432 22457999999999999999999999873
No 146
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=97.96 E-value=1.6e-05 Score=79.24 Aligned_cols=67 Identities=27% Similarity=0.458 Sum_probs=54.2
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
++|...+.||+|+||.||+|+...++. .||||.+.... ......|.+|++++++++||||+++++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~--~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 71 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRK--PVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSF 71 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCC--EEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeE
Confidence 467888999999999999999765433 89999886422 22234688999999999999999999875
No 147
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=97.96 E-value=1.1e-05 Score=85.00 Aligned_cols=66 Identities=23% Similarity=0.267 Sum_probs=53.9
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.|...+.||+|+||.||+|+....+ ..||+|.+.... ....+.+.+|+.++++++|||||++++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~--~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~ 70 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTK--ALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSF 70 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCC--CEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEE
Confidence 4777899999999999999976553 489999996432 22345688999999999999999999875
No 148
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=97.96 E-value=1.4e-05 Score=80.49 Aligned_cols=65 Identities=22% Similarity=0.323 Sum_probs=52.3
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|...+.||+|+||.||+|....++ ..||||.+.... ......+.+|+.++.+++|++||++++++
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~--~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~ 69 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATG--KMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAY 69 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCC--ceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEE
Confidence 566788999999999999976543 389999986432 22234678999999999999999999875
No 149
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=97.96 E-value=1.6e-05 Score=80.98 Aligned_cols=69 Identities=22% Similarity=0.518 Sum_probs=54.6
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC-CcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-RGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
++|+..+.||+|+||.||+|.....+....+|+|.++... ....+.|.+|++++.++ +|||||+++|++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~ 77 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC 77 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEE
Confidence 4677789999999999999997654333457888886432 23345788999999999 899999999986
No 150
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.95 E-value=1.8e-05 Score=70.57 Aligned_cols=105 Identities=18% Similarity=0.154 Sum_probs=60.7
Q ss_pred CcEEecCCCcCcccCCcccc-CCCCCCEEEccCCcCccCccccccCCCCCCEEEeeccccccccCccccCCCCCCEEEcc
Q 046340 66 LQILALHNNTFGGQIPDNIS-HCVNLESLGLGVNELVGKVPGKLGSLSKLWILSVHYNSLSGEIPSSFGNLSSLEFLSAA 144 (715)
Q Consensus 66 L~~L~Ls~n~i~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~ 144 (715)
=+.++|.+.++..+. .++ -+.+...+||++|.+... ..|..++.|..|.|++|+|+.+.|.--.-+++|+.|.+.
T Consensus 21 e~e~~LR~lkip~ie--nlg~~~d~~d~iDLtdNdl~~l--~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~Lt 96 (233)
T KOG1644|consen 21 ERELDLRGLKIPVIE--NLGATLDQFDAIDLTDNDLRKL--DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILT 96 (233)
T ss_pred ccccccccccccchh--hccccccccceecccccchhhc--ccCCCccccceEEecCCcceeeccchhhhccccceEEec
Confidence 345566655554211 122 123556677777776532 456667777777777777775555544455667777777
Q ss_pred cCcceecC-CccccCCCCCCEEEeecccCcc
Q 046340 145 ANQFVGQF-PETLSELKMMRYISFGENKLSG 174 (715)
Q Consensus 145 ~n~~~~~~-~~~l~~l~~L~~L~L~~n~i~~ 174 (715)
+|.+.... -..+..++.|++|.+-+|+++.
T Consensus 97 nNsi~~l~dl~pLa~~p~L~~Ltll~Npv~~ 127 (233)
T KOG1644|consen 97 NNSIQELGDLDPLASCPKLEYLTLLGNPVEH 127 (233)
T ss_pred CcchhhhhhcchhccCCccceeeecCCchhc
Confidence 77665322 1234556666666666666653
No 151
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=97.95 E-value=1.9e-05 Score=79.60 Aligned_cols=68 Identities=29% Similarity=0.429 Sum_probs=54.8
Q ss_pred CCccccccCcCCCceEEEEEECC--CCceeEEEEEEeeccCCc-chHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNH--DDHETLVAVKVLNLQHRG-ASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~--~~~~~~~avk~l~~~~~~-~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||+|++.. .+.+..||||.+...... ..++|.+|++++++++||||++++++|
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~ 75 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVC 75 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeee
Confidence 45666889999999999999753 223458999999755432 356799999999999999999999876
No 152
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=97.95 E-value=1.3e-05 Score=79.39 Aligned_cols=65 Identities=34% Similarity=0.501 Sum_probs=52.9
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEE
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITS 713 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~ 713 (715)
++...+.||+|.||.||.+...+. +...|||.....+....+...+|+.+|.+++|||||+.+|.
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~--g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~ 82 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKT--GELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGS 82 (313)
T ss_pred hhhhhccccCccceEEEEEEecCC--CcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCc
Confidence 455568899999999999997653 34899999975532225668999999999999999999995
No 153
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=97.94 E-value=1.6e-05 Score=78.67 Aligned_cols=64 Identities=22% Similarity=0.439 Sum_probs=53.3
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||+|.+.++ . .+|+|.++.... ..++|.+|+.++.+++||||++++|+|
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~-~--~~aik~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~ 68 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQ-Y--DVAIKMIKEGSM-SEDEFIEEAKVMMKLSHEKLVQLYGVC 68 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCC-C--cEEEEEcCCCcc-cHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence 466668899999999999997654 2 599999874432 346799999999999999999999987
No 154
>PTZ00036 glycogen synthase kinase; Provisional
Probab=97.94 E-value=1.4e-05 Score=85.70 Aligned_cols=65 Identities=25% Similarity=0.387 Sum_probs=52.4
Q ss_pred hhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 644 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 644 ~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
....|...+.||+|+||.||+|+..+.+ ..||||++.... ....+|+.++++++|||||++++++
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~--~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~ 128 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTS--EKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYY 128 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCC--CEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeE
Confidence 3457888899999999999999976543 389999985432 2346799999999999999998763
No 155
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=97.94 E-value=2.2e-05 Score=79.91 Aligned_cols=67 Identities=28% Similarity=0.532 Sum_probs=54.5
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
++|...+.||+|+||.||+|+...++ ..||+|.++.... .....+.+|+.++++++||||+++++++
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~ 73 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTD--NLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 73 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCC--cEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEE
Confidence 46777889999999999999976543 3899999974432 2334678999999999999999999986
No 156
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=97.94 E-value=1.5e-05 Score=78.87 Aligned_cols=65 Identities=32% Similarity=0.534 Sum_probs=54.8
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.++|...+.||+|+||.||+|...+. .||+|.++.... ..+.+.+|+.++++++|+||++++|++
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~~~----~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~ 69 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYRGQ----KVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVV 69 (256)
T ss_pred hhhccceeeeecCCCceEEEEEecCc----EEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEE
Confidence 35677789999999999999997533 799999975533 456799999999999999999999986
No 157
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=97.93 E-value=1.5e-05 Score=80.81 Aligned_cols=60 Identities=25% Similarity=0.472 Sum_probs=50.9
Q ss_pred ccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEE
Q 046340 651 ENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIIT 712 (715)
Q Consensus 651 ~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g 712 (715)
++++|+|.||.||-|+.+.. |+-||||.+++.+ .+++.+.++|+.|+.+++||-||.|--
T Consensus 569 devLGSGQFG~VYgg~hRkt--GrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~ 630 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKT--GRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLEC 630 (888)
T ss_pred HhhccCCcceeeecceeccc--CceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEE
Confidence 58899999999999997654 4589999997654 455678999999999999999998753
No 158
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=97.93 E-value=1.7e-05 Score=78.73 Aligned_cols=66 Identities=29% Similarity=0.533 Sum_probs=54.5
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..+|...+.||+|+||.||+|...++ ..||+|.+.... ...++|.+|+.++++++||||++++++.
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~---~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 70 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGH---TKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVV 70 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCC---ceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEE
Confidence 34677778999999999999997654 379999997543 3356899999999999999999999874
No 159
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=97.93 E-value=2e-05 Score=80.28 Aligned_cols=70 Identities=30% Similarity=0.532 Sum_probs=57.0
Q ss_pred HhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 643 KATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 643 ~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
....+|+..+.+|+|+||.||+|+...++ ..||+|+++... ......+.+|+.++++++||||++++|++
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~--~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~ 75 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTG--ELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIV 75 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCC--cEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeehee
Confidence 45677888899999999999999986543 389999997432 22335678999999999999999999875
No 160
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=97.92 E-value=1.8e-05 Score=80.00 Aligned_cols=69 Identities=29% Similarity=0.516 Sum_probs=55.4
Q ss_pred cCCccccccCcCCCceEEEEEECC---CCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNH---DDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~---~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|...+.+|+|+||.||++...+ ...+..+|+|.+........+.+.+|+.++++++||||++++++|
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 76 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVC 76 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence 467778999999999999998532 123347899999755444456799999999999999999999987
No 161
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=97.92 E-value=1.9e-05 Score=81.94 Aligned_cols=67 Identities=21% Similarity=0.358 Sum_probs=53.9
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|...+.||+|+||.||+|+...++ ..||||++.... ......+.+|+.++++++||||+++++++
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~ 83 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTG--EKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVF 83 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCC--cEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhhee
Confidence 67888899999999999999975443 389999986421 12234688999999999999999999875
No 162
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=97.92 E-value=1.5e-05 Score=80.47 Aligned_cols=73 Identities=25% Similarity=0.422 Sum_probs=56.5
Q ss_pred HHhhcCCccccccCcCCCceEEEEEECC---CCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 642 IKATDGFSLENLIGAGSFGSVYKGILNH---DDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 642 ~~~~~~f~~~~~lg~g~~g~vy~~~~~~---~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+....+|...+.||+|+||.||+|+..+ +..+..||+|.+..... .....+.+|+.++++++||||+++++++
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 78 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV 78 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence 3456678888999999999999998643 22334799999864332 2234688999999999999999999975
No 163
>PRK09188 serine/threonine protein kinase; Provisional
Probab=97.92 E-value=1.7e-05 Score=81.05 Aligned_cols=67 Identities=21% Similarity=0.176 Sum_probs=50.8
Q ss_pred HHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC-----CcchHHHHHHHHHHhcCCCCCcce
Q 046340 642 IKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-----RGASKSFMAQCQALRSVRHRNLVK 709 (715)
Q Consensus 642 ~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-----~~~~~~~~~e~~~l~~~~h~niv~ 709 (715)
......|...+.||+|+||+||+|..... .+..||||++.... ....+.|.+|++++.+++|+|+|.
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~-~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~ 85 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGD-PGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVP 85 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCC-CCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCc
Confidence 34456789999999999999999987542 22368999975321 112346899999999999999984
No 164
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=97.92 E-value=1.8e-05 Score=80.14 Aligned_cols=76 Identities=30% Similarity=0.469 Sum_probs=62.3
Q ss_pred chHHHHHHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 636 VSYQNLIKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 636 ~~~~~~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
++.+++.+++++|...+.||+|+||.||++....+. ..+|+|.+.... ...+.+.+|+.++.++ +|||++++++++
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~--~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~ 88 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDG--SLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMF 88 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCC--CEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEE
Confidence 555677778899999999999999999999976543 489999996432 2245688999999999 899999999976
No 165
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=97.92 E-value=2e-05 Score=78.33 Aligned_cols=68 Identities=32% Similarity=0.603 Sum_probs=56.2
Q ss_pred HhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 643 KATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 643 ~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
...++|...+.||+|+||.||+|...++ . .||||.+..... ..+++.+|+.++++++||||+++++++
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~~-~--~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~ 70 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWNGT-T--KVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVC 70 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEcCC-c--eEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeee
Confidence 3456788889999999999999997654 3 699999975432 356799999999999999999999875
No 166
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=97.91 E-value=2.2e-05 Score=79.86 Aligned_cols=70 Identities=31% Similarity=0.586 Sum_probs=54.0
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCc--eeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDH--ETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~--~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.++|...+.||+|+||.||+|+....+. ...||+|.+..... ....++.+|+.++++++|||||+++|+|
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~ 78 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVC 78 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEE
Confidence 3456777899999999999999754322 13579998864432 2234688999999999999999999987
No 167
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=97.91 E-value=1.5e-05 Score=83.58 Aligned_cols=71 Identities=20% Similarity=0.278 Sum_probs=56.6
Q ss_pred HHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 642 IKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 642 ~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.....+|...+.||+|+||.||+++...++ ..||+|.+.... ....+.+.+|+.+++.++|||||++++++
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~ 112 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSK--QVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAF 112 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCC--CEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence 344667888899999999999999976553 489999996421 22334578999999999999999999875
No 168
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=97.91 E-value=1.8e-05 Score=79.67 Aligned_cols=66 Identities=21% Similarity=0.278 Sum_probs=52.3
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC---cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR---GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~---~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|+..+.||+|+||.||++....+ +..||||.+..... .....+.+|+.++++++|||||++++++
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 69 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRAT--GKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY 69 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCC--CceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 366678899999999999996543 34899999975321 2234578899999999999999999875
No 169
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=97.90 E-value=2.4e-05 Score=77.50 Aligned_cols=63 Identities=33% Similarity=0.596 Sum_probs=51.1
Q ss_pred cccCcCCCceEEEEEECCCC-ceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDD-HETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~-~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|++...+ ....+|+|.+..... ...+++.+|+.++++++|||||+++|++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 65 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVC 65 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 46899999999999875543 234899999975543 2346799999999999999999999986
No 170
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.90 E-value=3e-05 Score=78.66 Aligned_cols=67 Identities=25% Similarity=0.383 Sum_probs=55.8
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|...+.||+|+||.||+|+....+ ..||+|.+........+.+.+|+.+++.++||||+++++++
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~ 85 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATG--QEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 85 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCC--CEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 56777889999999999999965433 38999999765544456788999999999999999999986
No 171
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=97.90 E-value=2e-05 Score=79.84 Aligned_cols=69 Identities=23% Similarity=0.463 Sum_probs=53.9
Q ss_pred cCCccccccCcCCCceEEEEEECCC------------CceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEE
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHD------------DHETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIIT 712 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~------------~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g 712 (715)
.+|...+.||+|+||.||++...+. .+...||+|.+.... ......|.+|++++++++|||+++++|
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 4677789999999999999876431 122368999997542 223457999999999999999999999
Q ss_pred Ee
Q 046340 713 SC 714 (715)
Q Consensus 713 ~~ 714 (715)
++
T Consensus 85 ~~ 86 (295)
T cd05097 85 VC 86 (295)
T ss_pred EE
Confidence 87
No 172
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=97.90 E-value=1.7e-05 Score=79.28 Aligned_cols=69 Identities=28% Similarity=0.498 Sum_probs=54.7
Q ss_pred cCCccccccCcCCCceEEEEEECCC-CceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHD-DHETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~-~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|...+.||+|+||.||+|...+. .....||||...... ....+.|.+|+.++++++||||++++|+|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~ 76 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVI 76 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEE
Confidence 3466778999999999999997543 223468999986543 23346799999999999999999999986
No 173
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=97.90 E-value=2.3e-05 Score=77.66 Aligned_cols=63 Identities=27% Similarity=0.447 Sum_probs=51.4
Q ss_pred cccCcCCCceEEEEEECC-CCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNH-DDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~-~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|.+.. ++....||+|.++.... ...+.|.+|+.++++++|||||++++++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 65 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVV 65 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEE
Confidence 368999999999999855 33334699999976544 4456799999999999999999999875
No 174
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=97.90 E-value=4.6e-06 Score=85.36 Aligned_cols=56 Identities=29% Similarity=0.499 Sum_probs=47.4
Q ss_pred ccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEeC
Q 046340 649 SLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSCA 715 (715)
Q Consensus 649 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~~ 715 (715)
...+-+|.|+-|.||.|++.+. .||||+.+..+ ..+|+=+++++||||++|.|+|+
T Consensus 127 sELeWlGSGaQGAVF~Grl~ne----tVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCt 182 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRLHNE----TVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCT 182 (904)
T ss_pred hhhhhhccCcccceeeeeccCc----eehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeec
Confidence 4446799999999999999776 79999986432 35788899999999999999995
No 175
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=97.90 E-value=2.1e-05 Score=88.79 Aligned_cols=67 Identities=22% Similarity=0.363 Sum_probs=54.6
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC---cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR---GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~---~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
++|...+.||+|+||.||+|+...+ +..||+|++..... ...+.|.+|+.++++++|||||+++++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~t--g~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~ 71 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVC--SRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSIC 71 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCC--CcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEE
Confidence 4677889999999999999996544 34899999964321 1235689999999999999999999986
No 176
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=97.89 E-value=2.1e-05 Score=78.14 Aligned_cols=62 Identities=35% Similarity=0.622 Sum_probs=49.2
Q ss_pred ccCcCCCceEEEEEECCCC----------ceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 653 LIGAGSFGSVYKGILNHDD----------HETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 653 ~lg~g~~g~vy~~~~~~~~----------~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.||+|+||.||+|++.... ....||+|.+..........|.+|+.+++.++|||||+++|+|
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~ 73 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVC 73 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 5899999999999864321 2235899998755444445788999999999999999999987
No 177
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=97.89 E-value=2e-05 Score=78.30 Aligned_cols=66 Identities=27% Similarity=0.541 Sum_probs=54.5
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..+|...+.||+|+||.||+|...++ . .||+|.+..... ..+.+.+|+.++++++|+||+++++++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~-~--~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~ 70 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNS-T--KVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVV 70 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCC-c--eEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence 35677789999999999999997654 3 699999865432 356799999999999999999999875
No 178
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=97.89 E-value=2e-05 Score=82.53 Aligned_cols=73 Identities=19% Similarity=0.291 Sum_probs=57.8
Q ss_pred HHHHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 640 NLIKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 640 ~~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
++....++|...+.||+|+||.||+++...++ ..||+|.+.... ....+.+.+|+.+++.++|||||++++++
T Consensus 37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~ 112 (370)
T cd05621 37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQ--KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAF 112 (370)
T ss_pred hcCCCHHHCeEEEEEEecCCeEEEEEEECCCC--CEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 34445677888899999999999999986553 389999996421 22334588999999999999999999875
No 179
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=97.89 E-value=2.1e-05 Score=82.76 Aligned_cols=67 Identities=25% Similarity=0.259 Sum_probs=54.1
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
++|...+.||+|+||.||+++.... +..||||.+.... ....+.+.+|+.++++++|||||++++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~--~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~ 70 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDT--NALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSF 70 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCC--CCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence 3677889999999999999997654 3489999996432 22345688999999999999999999865
No 180
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.89 E-value=2.7e-05 Score=78.56 Aligned_cols=66 Identities=20% Similarity=0.239 Sum_probs=54.6
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||.|++|.||+|...+.+ ..+|+|.+..... ....++.+|++++++++|||||+++|+|
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~--~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 68 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTG--MIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAF 68 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCC--eEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEE
Confidence 5677789999999999999986553 4899999975432 2346789999999999999999999976
No 181
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=97.89 E-value=2.8e-05 Score=76.76 Aligned_cols=61 Identities=34% Similarity=0.595 Sum_probs=49.2
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|+....+ ..||+|....... .....|.+|++++++++||||++++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~--~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 62 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADN--TPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 62 (252)
T ss_pred CccCcccCccEEEEEEecCC--ceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence 36899999999999976443 3899998864322 2245789999999999999999999986
No 182
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=97.89 E-value=2.4e-05 Score=78.04 Aligned_cols=69 Identities=26% Similarity=0.524 Sum_probs=55.0
Q ss_pred cCCccccccCcCCCceEEEEEECCC-CceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHD-DHETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~-~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|+..+.||+|+||.||+|+.... .....+|+|.++... ....+++..|++++++++|||++++.|++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 75 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVV 75 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEE
Confidence 4677789999999999999997532 223478999996542 22345789999999999999999999986
No 183
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=97.88 E-value=2.1e-05 Score=79.16 Aligned_cols=68 Identities=25% Similarity=0.409 Sum_probs=53.2
Q ss_pred CCccccccCcCCCceEEEEEECCC---CceeEEEEEEeeccCCc-chHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHD---DHETLVAVKVLNLQHRG-ASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~---~~~~~~avk~l~~~~~~-~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||+|+..++ ..+..||+|++...... ..+.|.+|+.++.+++|||||+++|++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~ 77 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVV 77 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEE
Confidence 455668899999999999987532 23357999999744322 235688999999999999999999976
No 184
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=97.88 E-value=2.9e-05 Score=76.90 Aligned_cols=65 Identities=32% Similarity=0.541 Sum_probs=52.5
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC-----CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-----RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-----~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|...+.||+|+||.||+|.....+ ..||+|.+.... ++..+.+.+|+.++++++||||++++|++
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~--~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~ 71 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDG--DFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTE 71 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCC--cEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeE
Confidence 556688999999999999976432 389999986433 12345789999999999999999999986
No 185
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=97.88 E-value=2.6e-05 Score=79.62 Aligned_cols=67 Identities=24% Similarity=0.351 Sum_probs=54.1
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC---cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR---GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~---~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..|...+.||+|+||.||+|+...++. .||+|.+..... ...+++.+|++++++++||||++++|+|
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~--~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~ 84 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNE--VVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCY 84 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCc--EEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 347777899999999999999765433 899999864322 2235688999999999999999999986
No 186
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=97.88 E-value=2.3e-05 Score=79.21 Aligned_cols=69 Identities=28% Similarity=0.504 Sum_probs=55.8
Q ss_pred hhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 644 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 644 ~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
++++|...+.||+|+||.||+|.....+. .||+|++..... +....+.+|+.++++++|+||+++++++
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~--~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~ 72 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQ--LVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDII 72 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCc--EEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 35678888999999999999999755433 899999965432 2234678999999999999999999975
No 187
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=97.88 E-value=3e-05 Score=77.82 Aligned_cols=69 Identities=25% Similarity=0.427 Sum_probs=52.5
Q ss_pred cCCccccccCcCCCceEEEEEECCCCc--eeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDH--ETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~--~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|...+.||+|+||.||+|++...+. ...+|+|.+..... ....++..|+.++++++|||||+++|+|
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~ 78 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGIC 78 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEE
Confidence 356677899999999999999854322 23478888854322 2235688889999999999999999986
No 188
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=97.88 E-value=1.9e-05 Score=80.72 Aligned_cols=70 Identities=26% Similarity=0.336 Sum_probs=58.9
Q ss_pred HHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeecc---CCcchHHHHHHHHHHhcCCCCCcceEEEE
Q 046340 642 IKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQ---HRGASKSFMAQCQALRSVRHRNLVKIITS 713 (715)
Q Consensus 642 ~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~---~~~~~~~~~~e~~~l~~~~h~niv~l~g~ 713 (715)
....++|+....||+|+||.||.++-+++ |..+|+|+++.. ++.+.+-+..|-.+|+..++|+||+|+..
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~T--g~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYs 209 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDT--GEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYS 209 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccC--CcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEE
Confidence 34578899999999999999999996554 559999999754 34556778899999999999999999865
No 189
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=97.88 E-value=2.3e-05 Score=78.81 Aligned_cols=70 Identities=26% Similarity=0.479 Sum_probs=55.9
Q ss_pred hcCCccccccCcCCCceEEEEEECCCC--ceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDD--HETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~--~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.++|...+.||+|+||.||+|...+.. .+..||+|++.... ....+.+.+|+.++++++||||++++|+|
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~ 77 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVC 77 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 456777899999999999999986521 23579999986442 23345688999999999999999999986
No 190
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=97.88 E-value=3.7e-05 Score=77.68 Aligned_cols=67 Identities=27% Similarity=0.489 Sum_probs=50.3
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcC---CCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSV---RHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~---~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||+|+.... .+..||||+++... ......+.+|+.++..+ +|||||+++++|
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~ 73 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKN-GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVC 73 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCC-CCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEE
Confidence 567778999999999999986332 23479999986432 22234577888877765 799999999986
No 191
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=97.88 E-value=1.9e-05 Score=79.20 Aligned_cols=70 Identities=30% Similarity=0.522 Sum_probs=56.2
Q ss_pred hcCCccccccCcCCCceEEEEEECCCC---ceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDD---HETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~---~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.++|...+.||+|+||.||+|...+.. .+..||+|....... ....+|.+|+.++++++|+||++++|++
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 78 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVS 78 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 466888899999999999999986521 345799999864432 2345799999999999999999999975
No 192
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=97.88 E-value=2.3e-05 Score=79.48 Aligned_cols=69 Identities=23% Similarity=0.565 Sum_probs=54.4
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC-CcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-RGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
++|...+.||+|+||.||+|...++.....+|+|.++... ....+.|.+|+.+++++ +|||||++++++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 72 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGAC 72 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEE
Confidence 4677788999999999999998655333457899887432 23345789999999999 799999999876
No 193
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=97.87 E-value=2.8e-05 Score=78.15 Aligned_cols=70 Identities=27% Similarity=0.498 Sum_probs=54.9
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCc--eeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDH--ETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~--~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..+|...+.||+|+||.||+|++...+. ...||+|.+.... ....+++.+|+.++++++||||++++|+|
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~ 78 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGIC 78 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEE
Confidence 3467777999999999999999754322 2258999996433 23346788999999999999999999987
No 194
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=97.87 E-value=1.1e-05 Score=83.24 Aligned_cols=71 Identities=27% Similarity=0.408 Sum_probs=54.8
Q ss_pred hhcCCccccccCcCCCceEEEEEECCC---CceeEEEEEEeeccCC-cchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 644 ATDGFSLENLIGAGSFGSVYKGILNHD---DHETLVAVKVLNLQHR-GASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 644 ~~~~f~~~~~lg~g~~g~vy~~~~~~~---~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
+...|...+.||+|+||.||+|...+. .++..||+|+++.... ...+.+.+|+.++.++ +||||++++|+|
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~ 80 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGAC 80 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeE
Confidence 344678889999999999999975332 2335799999974432 2235678999999999 899999999986
No 195
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=97.87 E-value=2.5e-05 Score=81.15 Aligned_cols=74 Identities=19% Similarity=0.312 Sum_probs=58.8
Q ss_pred HHHHHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 639 QNLIKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 639 ~~~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+++....++|...+.||+|+||.||+|....+ +..||+|++.... ....+.+.+|+.++.+++|||||++++++
T Consensus 10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~ 85 (345)
T cd07877 10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKT--GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVF 85 (345)
T ss_pred HHHhhccCceEEEEEeeecCCeEEEEEEEcCC--CeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeee
Confidence 44556678899999999999999999986544 3489999996432 22245688999999999999999998865
No 196
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.87 E-value=2.2e-05 Score=78.26 Aligned_cols=67 Identities=27% Similarity=0.450 Sum_probs=54.6
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
++|...+.||+|+||.||+|+..+.+ ..||+|.++.........+.+|+.+++.++||||+++++++
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~--~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~ 75 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTG--ELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSY 75 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCC--cEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence 45666788999999999999976543 38999999755444445688999999999999999999875
No 197
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=97.87 E-value=2.4e-05 Score=82.01 Aligned_cols=75 Identities=19% Similarity=0.275 Sum_probs=60.0
Q ss_pred HHHHHHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 638 YQNLIKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 638 ~~~~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..++....++|...+.||+|+||.||+++...++ ..||+|.+.... ....+.+.+|+.+++.++|||||++++++
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~--~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~ 112 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTR--KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF 112 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCC--cEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 4455666788999999999999999999976654 489999996421 22234578999999999999999999875
No 198
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=97.87 E-value=2.9e-05 Score=77.43 Aligned_cols=62 Identities=27% Similarity=0.437 Sum_probs=49.1
Q ss_pred ccCcCCCceEEEEEECCCCceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 653 LIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 653 ~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+||+|+||.||+|+..++.....+++|.+.... .+..+.|.+|+.+++.++|||||+++|+|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~ 64 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQC 64 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEe
Confidence 589999999999986554443457788776443 23346799999999999999999999986
No 199
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=97.87 E-value=2.9e-05 Score=77.38 Aligned_cols=69 Identities=26% Similarity=0.460 Sum_probs=54.2
Q ss_pred cCCccccccCcCCCceEEEEEECCC-CceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHD-DHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~-~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|...+.||+|+||.||+|+.... .....+|+|.++.... ...+.|.+|+.++++++||||+++++++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 74 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVV 74 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence 4567778999999999999986422 2234799999965432 2245789999999999999999999986
No 200
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=97.87 E-value=3e-05 Score=77.15 Aligned_cols=67 Identities=22% Similarity=0.371 Sum_probs=53.4
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC-----CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-----RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-----~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
++|...+.||+|+||.||+|...++ +..||+|.+.... ....+.+.+|+.++.+++||||++++|++
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~--~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 73 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADT--GRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCL 73 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCC--CcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEe
Confidence 4677889999999999999997554 3489999985321 11234688999999999999999999874
No 201
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=97.87 E-value=2.1e-06 Score=80.62 Aligned_cols=63 Identities=22% Similarity=0.419 Sum_probs=53.7
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|....++|+|+||.|||+.++..+ ..+|+|..+... +..+..+||.+|.+++.|.+|+.||.+
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG--~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSY 97 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESG--HVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSY 97 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccC--cEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhh
Confidence 556688999999999999987654 499999997553 356789999999999999999999965
No 202
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=97.86 E-value=2.7e-05 Score=78.20 Aligned_cols=69 Identities=29% Similarity=0.567 Sum_probs=54.6
Q ss_pred cCCccccccCcCCCceEEEEEECCCCc--eeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDH--ETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~--~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|...+.||+|+||.||+|.....+. ...+|+|.+..... ....++.+|+.++++++||||++++|+|
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 78 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGIC 78 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence 456667899999999999999754322 23689999865432 2346789999999999999999999987
No 203
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=97.86 E-value=2.3e-05 Score=79.27 Aligned_cols=67 Identities=24% Similarity=0.465 Sum_probs=55.8
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+.|+..+.||+|+||.||+|+....+ ..||+|.+........+.+.+|+.++++++||||+++++++
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~--~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 78 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETG--ALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAF 78 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCC--ceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEE
Confidence 45677788999999999999976543 48999999765444456789999999999999999999875
No 204
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=97.86 E-value=2.5e-05 Score=78.25 Aligned_cols=69 Identities=26% Similarity=0.447 Sum_probs=54.7
Q ss_pred cCCccccccCcCCCceEEEEEECCC---CceeEEEEEEeeccCCc-chHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHD---DHETLVAVKVLNLQHRG-ASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~---~~~~~~avk~l~~~~~~-~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|.....||+|+||.||+|+.... .....||+|.+...... ..+.|.+|+.++++++|||||+++++|
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 77 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLC 77 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEE
Confidence 4677788999999999999997532 12347999998654332 245799999999999999999999986
No 205
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=97.86 E-value=2.6e-05 Score=77.88 Aligned_cols=68 Identities=26% Similarity=0.491 Sum_probs=53.9
Q ss_pred CCccccccCcCCCceEEEEEECCCC-ceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDD-HETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~-~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||+|+..... ....||||.+.... ....++|.+|+.++++++||||+++++++
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~ 74 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVV 74 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEE
Confidence 4566789999999999999976432 22469999986442 22345799999999999999999999875
No 206
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.86 E-value=2.6e-05 Score=81.49 Aligned_cols=69 Identities=22% Similarity=0.262 Sum_probs=55.6
Q ss_pred hhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 644 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 644 ~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
...+|...+.||+|+||.||+++.... +..||||.+.... ......+.+|+.++++++||||+++++++
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 89 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVF 89 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCC--CceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeee
Confidence 356788889999999999999986543 3489999996432 22345688999999999999999999875
No 207
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=97.86 E-value=2.7e-05 Score=79.62 Aligned_cols=59 Identities=27% Similarity=0.346 Sum_probs=48.0
Q ss_pred cCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 654 IGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 654 lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
||+|+||.||+|+..+++ ..||+|.+.... ......+.+|+.++.+++|||||++++++
T Consensus 1 lg~G~~g~Vy~~~~~~~~--~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 62 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQ--RIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSF 62 (312)
T ss_pred CCcCCCeEEEEEEECCCC--CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEE
Confidence 699999999999976553 389999996432 23345688999999999999999998875
No 208
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=97.85 E-value=3.1e-05 Score=77.83 Aligned_cols=68 Identities=26% Similarity=0.511 Sum_probs=54.5
Q ss_pred CCccccccCcCCCceEEEEEECC---CCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNH---DDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~---~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
++.....||+|+||.||++...+ ...+..+|+|.+........++|.+|+.++++++||||+++++++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 76 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVC 76 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEE
Confidence 45667899999999999997532 123457999998765544456899999999999999999999876
No 209
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=97.85 E-value=3.1e-05 Score=77.63 Aligned_cols=65 Identities=29% Similarity=0.479 Sum_probs=52.3
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|...+.||+|+||.||+|....++ ..||+|...... ....+.+.+|+.++++++|||||++++++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 71 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQ--KVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 71 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCC--cEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 556688999999999999865443 389999986432 23345789999999999999999999886
No 210
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=97.85 E-value=2.5e-05 Score=78.63 Aligned_cols=65 Identities=28% Similarity=0.511 Sum_probs=53.2
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|+..+.||+|+||.||+|..... +..+|+|.+........+.+.+|+.++++++||||+++++++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~--~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~ 71 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKET--GVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 71 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCC--CeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEE
Confidence 34457799999999999997654 348899999655444456789999999999999999999876
No 211
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=97.85 E-value=2.3e-05 Score=78.93 Aligned_cols=66 Identities=27% Similarity=0.495 Sum_probs=53.4
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|+..+.||.|+||.||+|+....+ ..||||++.... ......+.+|++++++++||||+++++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~--~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 68 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTG--EVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 68 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCC--CEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhc
Confidence 4677789999999999999976543 389999986432 22235788999999999999999999875
No 212
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=97.85 E-value=3.5e-05 Score=78.11 Aligned_cols=70 Identities=24% Similarity=0.417 Sum_probs=55.1
Q ss_pred hcCCccccccCcCCCceEEEEEECCCC--------------ceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcce
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDD--------------HETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVK 709 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~--------------~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~ 709 (715)
..+|...+.||+|+||.||+|+..+.. ....||+|.+..... ...++|.+|+.++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 346777899999999999999865421 123689999875432 33467899999999999999999
Q ss_pred EEEEe
Q 046340 710 IITSC 714 (715)
Q Consensus 710 l~g~~ 714 (715)
++++|
T Consensus 84 ~~~~~ 88 (296)
T cd05051 84 LLGVC 88 (296)
T ss_pred EEEEE
Confidence 99986
No 213
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=97.85 E-value=3.4e-05 Score=79.05 Aligned_cols=67 Identities=27% Similarity=0.478 Sum_probs=54.0
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|.....||+|+||.||+|+...+..+..||+|.+.... ....+.+.+|+.++.+++||||+++++++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 71 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVF 71 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEE
Confidence 56668899999999999997652134489999997632 23345688999999999999999999986
No 214
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=97.84 E-value=2.7e-05 Score=77.37 Aligned_cols=66 Identities=29% Similarity=0.542 Sum_probs=54.1
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+.|...+.||+|+||.||+|+..++ . .||+|+++... ...++|.+|+.++++++||||+++++++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~--~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~ 70 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGT-T--RVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVV 70 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCC-c--eEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence 34577888999999999999987654 3 69999997432 2346799999999999999999999864
No 215
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=97.84 E-value=3.6e-05 Score=76.44 Aligned_cols=63 Identities=29% Similarity=0.531 Sum_probs=49.7
Q ss_pred cccCcCCCceEEEEEECCC-CceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHD-DHETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~-~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|+..+. .....||+|++.... ....+.+.+|+.+++.++||||++++|+|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 65 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGIC 65 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEe
Confidence 4689999999999997532 233579999986432 23346788999999999999999999976
No 216
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=97.84 E-value=3.9e-05 Score=77.27 Aligned_cols=66 Identities=26% Similarity=0.495 Sum_probs=53.4
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||+|+...++. .||||.++... ....+.+.+|+.++.+++||||++++|++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~--~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 68 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQ--IVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVL 68 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCc--EEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 36667889999999999999765433 89999986432 22345788999999999999999999986
No 217
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=97.84 E-value=4e-05 Score=76.38 Aligned_cols=67 Identities=19% Similarity=0.313 Sum_probs=53.4
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-----cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-----GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-----~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|...+.||+|+||.||+|..... +..||+|++..... +..+.+.+|+.++++++||||++++|++
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 73 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDT--GRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCL 73 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCC--CcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEE
Confidence 3677889999999999999996554 34899999864321 2234688999999999999999999874
No 218
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=97.84 E-value=4.2e-05 Score=75.96 Aligned_cols=67 Identities=30% Similarity=0.476 Sum_probs=56.4
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|...+.+|+|+||.||+|....+.. .+|+|.+........+.+.+|+.++++++||||++++|+.
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~--~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~ 69 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGE--LVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSY 69 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCC--EEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEE
Confidence 467778899999999999999765433 8999999765444557799999999999999999999874
No 219
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=97.83 E-value=3.3e-05 Score=79.41 Aligned_cols=61 Identities=23% Similarity=0.341 Sum_probs=48.9
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+.||+|+||.||+++...++ ..||+|.++... ......+.+|+.++++++||||+++++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~ 64 (323)
T cd05571 1 KLLGKGTFGKVILVREKATG--KYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSF 64 (323)
T ss_pred CeeeeCCCeEEEEEEECCCC--CEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEE
Confidence 36899999999999976543 489999997432 22335678999999999999999998875
No 220
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=97.83 E-value=3.3e-05 Score=76.40 Aligned_cols=66 Identities=26% Similarity=0.467 Sum_probs=54.1
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||+|+...++. .||+|.+.... ....+++.+|++++++++||||+++++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~--~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 68 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKR--VYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESF 68 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCc--EEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeee
Confidence 46677899999999999999865533 89999986432 23356789999999999999999999886
No 221
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=97.83 E-value=3.2e-05 Score=79.44 Aligned_cols=61 Identities=21% Similarity=0.319 Sum_probs=48.8
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+.||+|+||.||+++.... +..||+|.++... ......+.+|+.++++++||||+++++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~ 64 (323)
T cd05595 1 KLLGKGTFGKVILVREKAT--GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF 64 (323)
T ss_pred CeeeeCCCEEEEEEEECCC--CCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEE
Confidence 3689999999999996544 3489999997432 22345678999999999999999998875
No 222
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=97.83 E-value=2.9e-05 Score=81.23 Aligned_cols=67 Identities=22% Similarity=0.265 Sum_probs=53.9
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
++|+..+.||+|+||.||+++.... +..||||.++... ......+.+|+.++.+++|||||++++++
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~ 70 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDT--GHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSF 70 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCC--CCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence 3677889999999999999997554 3489999996432 12234678999999999999999999875
No 223
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=97.83 E-value=3.6e-05 Score=77.97 Aligned_cols=67 Identities=24% Similarity=0.418 Sum_probs=54.2
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC--cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR--GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~--~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|...+.||+|+||.||+|+...++ ..+|+|.++.... .....+.+|+.++++++||||+++++++
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~--~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~ 73 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTG--EIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVV 73 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCC--cEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEE
Confidence 46777899999999999999986543 3899999974432 2234578899999999999999999875
No 224
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=97.83 E-value=1.7e-05 Score=80.02 Aligned_cols=66 Identities=29% Similarity=0.423 Sum_probs=53.3
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|+..+.||+|+||.||+|...+++ ..||+|++.... ....+.+.+|++++++++||||+++++++
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~--~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 69 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETG--QIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVF 69 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCC--CEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhc
Confidence 5677789999999999999986543 389999985432 22245688999999999999999998875
No 225
>PHA03212 serine/threonine kinase US3; Provisional
Probab=97.83 E-value=3.2e-05 Score=81.52 Aligned_cols=62 Identities=19% Similarity=0.301 Sum_probs=51.6
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
...|...+.||+|+||.||++.-..+ +..||+|.... ..+.+|+.++++++|||||++++++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~--~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~ 152 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKT--CEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTF 152 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCC--CCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEE
Confidence 35688889999999999999986544 44899997532 3478999999999999999999875
No 226
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.83 E-value=4.8e-05 Score=77.13 Aligned_cols=67 Identities=22% Similarity=0.376 Sum_probs=55.5
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|...+.||+|+||.||+|.....+ ..||+|.+........+.+.+|+.++++++||||+++++++
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~--~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~ 86 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATG--QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCC--cEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 45677788999999999999865443 38999999765544557789999999999999999999875
No 227
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=97.83 E-value=2.7e-05 Score=79.15 Aligned_cols=71 Identities=25% Similarity=0.507 Sum_probs=55.5
Q ss_pred hhcCCccccccCcCCCceEEEEEEC---CCCceeEEEEEEeeccCC-cchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 644 ATDGFSLENLIGAGSFGSVYKGILN---HDDHETLVAVKVLNLQHR-GASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 644 ~~~~f~~~~~lg~g~~g~vy~~~~~---~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
...+|...+.||+|+||.||+|+.. ....+..||||+++.... ...+.+.+|+.+++++ +||||++++|+|
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 108 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGAC 108 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEE
Confidence 3456888899999999999999852 122445799999875432 2235689999999999 899999999986
No 228
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=97.82 E-value=2e-05 Score=81.78 Aligned_cols=69 Identities=19% Similarity=0.299 Sum_probs=54.3
Q ss_pred hhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 644 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 644 ~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..+.|...+.||+|+||.||+|....+ +..||||.+.... ....+.+.+|+.++++++|||||++++++
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 83 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVF 83 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCC--CCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhh
Confidence 346788889999999999999986544 3489999996432 12235678999999999999999988753
No 229
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=97.82 E-value=2.9e-05 Score=77.08 Aligned_cols=66 Identities=29% Similarity=0.538 Sum_probs=54.1
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.++|...+.||+|+||.||+|...++ . .+|+|.+.... ...+.|.+|+.++++++|+||+++++++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~-~--~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 70 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKH-T--KVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVV 70 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCC-c--cEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEE
Confidence 45677889999999999999986544 2 69999986432 2346799999999999999999999875
No 230
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=97.82 E-value=4.1e-05 Score=76.25 Aligned_cols=67 Identities=30% Similarity=0.504 Sum_probs=54.6
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
++|...+.||+|+||.||+|....++ ..||+|.++... ....+.+.+|++++++++|+|++++++++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~--~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~ 71 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDG--RVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASF 71 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCC--CEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeee
Confidence 46788899999999999999986443 489999986322 22346789999999999999999999875
No 231
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=97.82 E-value=3.5e-05 Score=76.18 Aligned_cols=65 Identities=28% Similarity=0.485 Sum_probs=55.1
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
++|+..+.||+|+||.||+|+..+++. .+|+|.++.... .+++.+|++++++++||||++++|++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~--~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~ 67 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQ--VVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSY 67 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCc--EEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeee
Confidence 567888999999999999999876433 899999964422 56899999999999999999999975
No 232
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=97.82 E-value=3.5e-05 Score=77.60 Aligned_cols=69 Identities=28% Similarity=0.527 Sum_probs=54.6
Q ss_pred cCCccccccCcCCCceEEEEEECCCC---ceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDD---HETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~---~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|...+.||+|+||.||+|...... ....||+|.+..... ....+|.+|+.++++++||||++++|++
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~ 77 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVC 77 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEE
Confidence 46777789999999999999975432 224799999964432 2235689999999999999999999986
No 233
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=97.82 E-value=4.6e-05 Score=75.82 Aligned_cols=67 Identities=24% Similarity=0.379 Sum_probs=53.6
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC-----CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-----RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-----~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|...+.||+|+||.||+|+.... +..||+|.+.... ......+.+|+.++++++||||++++|++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~ 73 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADT--GRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCL 73 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCC--CCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEE
Confidence 4678889999999999999996543 3489999985321 12235788999999999999999999875
No 234
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=97.82 E-value=3.4e-05 Score=79.49 Aligned_cols=72 Identities=19% Similarity=0.257 Sum_probs=57.5
Q ss_pred HHHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeecc--CCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 641 LIKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQ--HRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 641 ~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~--~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+...+++|+..+.||+|+||.||+|..... +..||||++... .....+.+.+|++++.+++|||||++++++
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 78 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLT--GQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIF 78 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCC--CCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeE
Confidence 344677888899999999999999986544 348999998532 222346788999999999999999999976
No 235
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.81 E-value=1.9e-05 Score=52.92 Aligned_cols=36 Identities=42% Similarity=0.535 Sum_probs=19.3
Q ss_pred CCCEEeCCCCCCCccCChhhcCCCCCcEEecCCCcCc
Q 046340 41 FLRVLDLKNNSFRDEIPQEIGYLFRLQILALHNNTFG 77 (715)
Q Consensus 41 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~ 77 (715)
+|++|++++|+|+++ |..++++++|++|++++|+++
T Consensus 2 ~L~~L~l~~N~i~~l-~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQITDL-PPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-SSH-GGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCccc-CchHhCCCCCCEEEecCCCCC
Confidence 456666666666533 334556666666666666555
No 236
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=97.81 E-value=4.4e-05 Score=76.46 Aligned_cols=66 Identities=33% Similarity=0.489 Sum_probs=54.0
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||.|+||.||+|+...++ ..||+|.+.... ......+.+|+.++++++||||+++++++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~--~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 68 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTN--QVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSF 68 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCC--eEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEE
Confidence 4666788999999999999976543 489999986443 33345789999999999999999999875
No 237
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.81 E-value=1.8e-05 Score=53.11 Aligned_cols=36 Identities=36% Similarity=0.549 Sum_probs=15.7
Q ss_pred CCCEEEccCCcCccCccccccCCCCCCEEEeeccccc
Q 046340 89 NLESLGLGVNELVGKVPGKLGSLSKLWILSVHYNSLS 125 (715)
Q Consensus 89 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 125 (715)
+|++|++++|++++ .|..+.++++|+.|++++|+++
T Consensus 2 ~L~~L~l~~N~i~~-l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQITD-LPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-SS-HGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCcc-cCchHhCCCCCCEEEecCCCCC
Confidence 34444444444442 2233445555555555555444
No 238
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=97.81 E-value=4.3e-05 Score=77.22 Aligned_cols=68 Identities=26% Similarity=0.445 Sum_probs=52.3
Q ss_pred CCccccccCcCCCceEEEEEECCC---CceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHD---DHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~---~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||+|+.... .....+|+|.+..... ...+++.+|+.++++++|||||+++|+|
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 72 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGAC 72 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEE
Confidence 366678999999999999986321 1223689998864432 2245789999999999999999999976
No 239
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=97.81 E-value=4.8e-05 Score=75.32 Aligned_cols=66 Identities=35% Similarity=0.623 Sum_probs=53.5
Q ss_pred ccccccCcCCCceEEEEEECCCC--ceeEEEEEEeeccCCc-chHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 649 SLENLIGAGSFGSVYKGILNHDD--HETLVAVKVLNLQHRG-ASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 649 ~~~~~lg~g~~g~vy~~~~~~~~--~~~~~avk~l~~~~~~-~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+..+.||+|+||.||+|+..+.+ .+..||+|++...... ..+.+..|+.++.+++||||+++++++
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 70 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVC 70 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEE
Confidence 44578999999999999986532 1248999999755433 456899999999999999999999876
No 240
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=97.81 E-value=7.5e-06 Score=80.26 Aligned_cols=67 Identities=15% Similarity=0.317 Sum_probs=53.0
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchH---HHHHHHHHHhcCCCCCcceEEEE
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASK---SFMAQCQALRSVRHRNLVKIITS 713 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~---~~~~e~~~l~~~~h~niv~l~g~ 713 (715)
...|+..+.+|+|.||+|-++.- ...+..||||.++..+.+++. ...+||+||+.++||||+.++.+
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e--~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEV 121 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYE--HKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEV 121 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhh--ccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhh
Confidence 34567778899999999999983 234558999999876544443 46899999999999999988754
No 241
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=97.81 E-value=5.8e-05 Score=75.02 Aligned_cols=67 Identities=21% Similarity=0.341 Sum_probs=54.2
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-----cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-----GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-----~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
++|...+.||+|+||.||+|....+ +..||+|.+..... ...+.+.+|+.++++++||||++++|++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~--~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 73 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDT--GRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCL 73 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCC--CcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE
Confidence 4688889999999999999986544 34899999864321 1234688999999999999999999985
No 242
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=97.81 E-value=4.5e-05 Score=76.81 Aligned_cols=66 Identities=23% Similarity=0.494 Sum_probs=53.9
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|+..+.||+|++|.||+|+...+ +..||||.+..... ...+.+.+|+.++++++||||+++++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~--~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 67 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTT--GEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVI 67 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCC--CeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeE
Confidence 467778999999999999997654 34899999975432 2245678999999999999999999986
No 243
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=97.81 E-value=3.9e-05 Score=79.14 Aligned_cols=66 Identities=23% Similarity=0.358 Sum_probs=53.4
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||+++....+ ..||+|.+.... ....+.|.+|+.++..++||||+++++++
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~ 70 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTG--QVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAF 70 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCC--CEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEE
Confidence 5777899999999999999976543 389999996421 22235688999999999999999999875
No 244
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=97.81 E-value=5.1e-05 Score=76.48 Aligned_cols=65 Identities=25% Similarity=0.428 Sum_probs=53.5
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|...+.||+|+||.||+|+...++ ..||||++.... ....+.+.+|+.++++++||||+++++++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~--~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~ 68 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETG--ETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVF 68 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCC--ceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEE
Confidence 566788999999999999976543 389999997543 22346799999999999999999999875
No 245
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.80 E-value=3.6e-05 Score=77.54 Aligned_cols=67 Identities=22% Similarity=0.275 Sum_probs=54.2
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|...+.||+|+||.||+|....++ ..||+|.+..... ...+.+.+|+++++.++||||+++++++
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~--~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 72 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTG--TVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAF 72 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCC--cEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeE
Confidence 35666689999999999999976543 3899999865432 2346789999999999999999999986
No 246
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=97.80 E-value=4.9e-05 Score=74.89 Aligned_cols=60 Identities=35% Similarity=0.626 Sum_probs=48.9
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccCCc-chHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRG-ASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~-~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|...++ . .+|+|.+...... ....|.+|+.++++++||||++++++|
T Consensus 1 ~~ig~g~~g~vy~~~~~~~-~--~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 61 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDK-T--PVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVC 61 (250)
T ss_pred CccCCCCCceEEEEEecCC-c--EEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEE
Confidence 3689999999999997654 3 7999998654322 234688999999999999999999986
No 247
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=97.80 E-value=4.3e-05 Score=77.02 Aligned_cols=65 Identities=20% Similarity=0.278 Sum_probs=51.5
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC---cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR---GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~---~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|+..+.||+|+||.||+|..... +..||+|.+..... ...+.+.+|+.++++++|+||+.+.+++
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~ 69 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRAT--GKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAY 69 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCC--CcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEE
Confidence 55568899999999999997654 34899999965421 2234578899999999999999998765
No 248
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=97.80 E-value=3.9e-05 Score=76.16 Aligned_cols=65 Identities=31% Similarity=0.557 Sum_probs=53.5
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|...+.||+|+||.||+|...++ . .||+|.+..... ..++|.+|+.++++++|||++++++++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~--~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~ 70 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGN-T--KVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVV 70 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCC-c--eeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEE
Confidence 3566778999999999999987654 3 699999975432 346799999999999999999999875
No 249
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=97.79 E-value=4.2e-05 Score=77.08 Aligned_cols=68 Identities=26% Similarity=0.324 Sum_probs=53.8
Q ss_pred CCccccccCcCCCceEEEEEEC--CCCceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILN--HDDHETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~--~~~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.|...+.||+|+||.||.+++. +...+..||+|.++... ....+.+.+|+.++++++||||++++|+|
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 75 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGIC 75 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEE
Confidence 4566788999999999999864 12234589999997543 23346799999999999999999999876
No 250
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=97.79 E-value=2.8e-05 Score=80.61 Aligned_cols=66 Identities=24% Similarity=0.347 Sum_probs=55.1
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEE
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITS 713 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~ 713 (715)
.+|...+.||+|+||.||+|+...+ +..||+|.+........+.+.+|++++++++||||++++++
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~--~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~ 70 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDC--DKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEV 70 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCC--CcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhh
Confidence 5677889999999999999996544 34899999976555556678999999999999999998764
No 251
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=97.79 E-value=5.1e-05 Score=75.75 Aligned_cols=63 Identities=24% Similarity=0.529 Sum_probs=50.3
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccC-CcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-RGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|+..+++....+|+|.+.... ....+.+.+|+.++.++ +||||++++++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 65 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC 65 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEE
Confidence 3689999999999998665443467899987432 23345789999999999 899999999986
No 252
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=97.79 E-value=4.7e-05 Score=76.74 Aligned_cols=65 Identities=26% Similarity=0.492 Sum_probs=53.2
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|...+.||+|+||.||+|+..+.+ ..+|+|++.... .....++.+|+.++++++|||+++++|++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~--~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 67 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTG--ELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIV 67 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCC--eEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeE
Confidence 345678999999999999976543 489999997653 33345788999999999999999999886
No 253
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=97.79 E-value=4.1e-05 Score=77.65 Aligned_cols=69 Identities=22% Similarity=0.487 Sum_probs=53.8
Q ss_pred cCCccccccCcCCCceEEEEEECC--------------CCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceE
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNH--------------DDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKI 710 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~--------------~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l 710 (715)
++|+..+.||+|+||.||++...+ .+....||+|++..... ....+|.+|+.++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 457788999999999999986432 11234689999975432 234579999999999999999999
Q ss_pred EEEe
Q 046340 711 ITSC 714 (715)
Q Consensus 711 ~g~~ 714 (715)
++++
T Consensus 85 ~~~~ 88 (296)
T cd05095 85 LAVC 88 (296)
T ss_pred EEEE
Confidence 9986
No 254
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=97.79 E-value=4.1e-05 Score=76.56 Aligned_cols=65 Identities=25% Similarity=0.426 Sum_probs=50.6
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC---c-------chHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR---G-------ASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~---~-------~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|...+.||+|+||.||+|..... +..||+|.++.... . ..+.+.+|+.++++++|||+++++|++
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~--~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 77 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTT--GEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFE 77 (272)
T ss_pred eeecceecccCceEEEEEeecCC--CceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEe
Confidence 45568899999999999986544 34899999853211 0 124578899999999999999999986
No 255
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=97.78 E-value=5.1e-05 Score=75.10 Aligned_cols=64 Identities=23% Similarity=0.439 Sum_probs=52.5
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|+..+.||+|+||.||+|.+.++ . .+|+|.+..... ...+|.+|+.++++++||||+++++++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~-~--~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~ 68 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGK-I--DVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVC 68 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCC-c--cEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 466778999999999999987543 2 699999864322 345789999999999999999999875
No 256
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=97.78 E-value=4.8e-05 Score=76.95 Aligned_cols=67 Identities=28% Similarity=0.519 Sum_probs=54.1
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
++|...+.||+|+||.||+|+...++ ..||+|.+..... .....+.+|++++++++||||+++++++
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~--~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 72 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTG--QLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDII 72 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCC--cEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEE
Confidence 56777889999999999999976443 3899999965432 2234577899999999999999999885
No 257
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=97.78 E-value=3.8e-05 Score=77.71 Aligned_cols=67 Identities=27% Similarity=0.410 Sum_probs=54.6
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|...+.||+|+||.||+|....+. ..||+|.+........+.+.+|+.++++++||||++++++|
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~--~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~ 85 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATG--QEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSY 85 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCC--CEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhhee
Confidence 46777788999999999999854432 37999998654444456789999999999999999999875
No 258
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=97.78 E-value=5.5e-05 Score=76.13 Aligned_cols=67 Identities=25% Similarity=0.417 Sum_probs=52.0
Q ss_pred CccccccCcCCCceEEEEEECC--CCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNH--DDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~--~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|...+.||+|+||+||.+.+.. ...+..||+|.++.... ...+.|.+|+.++++++||||++++|+|
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 75 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCC 75 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 3566889999999998876531 12345899999975432 2346788999999999999999999986
No 259
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.78 E-value=5.5e-06 Score=91.64 Aligned_cols=105 Identities=22% Similarity=0.225 Sum_probs=45.0
Q ss_pred CCCcEEecCCCcCcccC-Ccccc-CCCCCCEEEccCCcCccC-ccccccCCCCCCEEEeeccccccccCccccCCCCCCE
Q 046340 64 FRLQILALHNNTFGGQI-PDNIS-HCVNLESLGLGVNELVGK-VPGKLGSLSKLWILSVHYNSLSGEIPSSFGNLSSLEF 140 (715)
Q Consensus 64 ~~L~~L~Ls~n~i~~~~-~~~~~-~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 140 (715)
.+|++|++++.+.-... |..++ -+|.|++|.+++=.+... ....+.++++|..||+|+++++.. ..++.+++|++
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~ 199 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQV 199 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHH
Confidence 44555555554332111 12222 345555555554333211 112234555555555555555421 34455555555
Q ss_pred EEcccCccee-cCCccccCCCCCCEEEeecc
Q 046340 141 LSAAANQFVG-QFPETLSELKMMRYISFGEN 170 (715)
Q Consensus 141 L~l~~n~~~~-~~~~~l~~l~~L~~L~L~~n 170 (715)
|.+.+-.+.. ..-..+..+++|++||+|..
T Consensus 200 L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~ 230 (699)
T KOG3665|consen 200 LSMRNLEFESYQDLIDLFNLKKLRVLDISRD 230 (699)
T ss_pred HhccCCCCCchhhHHHHhcccCCCeeecccc
Confidence 5554433332 11122344445555554443
No 260
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=97.78 E-value=3.7e-05 Score=76.66 Aligned_cols=66 Identities=17% Similarity=0.343 Sum_probs=52.6
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC------cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR------GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~------~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|+..+.||+|+||.||+|+-..+ +..||+|.+..... ...+++.+|+.++++++|||||++++++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~--~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 72 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKT--GTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGAT 72 (268)
T ss_pred CccccceecCcCceEEEEEEEcCC--CcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhcee
Confidence 366778999999999999986444 34899999964321 1235788999999999999999999886
No 261
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=97.78 E-value=3.7e-05 Score=80.05 Aligned_cols=70 Identities=20% Similarity=0.322 Sum_probs=57.8
Q ss_pred HhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcc--hHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 643 KATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGA--SKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 643 ~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~--~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..+..|.....||+|.|++|..|+...++ ..||+|.++...-.. ...+.+|+.+|..+.|||||+++.+.
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~--~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~ 124 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTG--TEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVI 124 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCC--ceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeee
Confidence 34667888899999999999999987654 489999998664322 24589999999999999999999874
No 262
>PHA03211 serine/threonine kinase US3; Provisional
Probab=97.78 E-value=3.7e-05 Score=82.23 Aligned_cols=62 Identities=21% Similarity=0.281 Sum_probs=51.6
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
...|...+.||+|+||.||+|+...... .||||.... ..+.+|+.++++++|||||++++++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~--~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~ 229 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQ--RVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVR 229 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCC--EEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEE
Confidence 4468888999999999999999876533 899996432 2467899999999999999999986
No 263
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=97.78 E-value=4.8e-05 Score=77.09 Aligned_cols=67 Identities=24% Similarity=0.476 Sum_probs=54.6
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC--cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR--GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~--~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
++|...+.||+|+||.||+|+...++ ..||+|.+..... ...+.+.+|++++++++||||+++++++
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~--~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 70 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTN--ETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVV 70 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCC--cEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEE
Confidence 46778889999999999999976543 4899999864322 2235688999999999999999999986
No 264
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=97.78 E-value=2.7e-05 Score=84.55 Aligned_cols=66 Identities=18% Similarity=0.330 Sum_probs=55.2
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCC-CCCcceEEE
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVR-HRNLVKIIT 712 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~-h~niv~l~g 712 (715)
.......+.|.+|||+.||.++..+++ ..||+|++-.......+.+.+||.+|+.++ |||||.+++
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~--~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yid 102 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGG--KKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYID 102 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCC--ceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEec
Confidence 344566789999999999999976553 489999997666566678899999999996 999999998
No 265
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=97.78 E-value=4.8e-05 Score=77.98 Aligned_cols=65 Identities=23% Similarity=0.369 Sum_probs=52.9
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC---cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR---GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~---~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|...+.||+|+||.||+|+...+. ..||+|.+..... .....+.+|+.++++++|||+|+++|+|
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~--~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 94 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTN--EVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCY 94 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCC--cEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 666788999999999999976543 3899999864322 2234688999999999999999999986
No 266
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=97.77 E-value=5.8e-05 Score=76.06 Aligned_cols=66 Identities=26% Similarity=0.382 Sum_probs=53.3
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|+....||+|+||.||+|+....+ ..||+|++.... ....+.+.+|+.++++++|||++++++++
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~--~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~ 69 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETG--QIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVF 69 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCC--cEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEE
Confidence 4667788999999999999976543 389999986432 22235688999999999999999999976
No 267
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=97.77 E-value=4.4e-05 Score=77.49 Aligned_cols=65 Identities=20% Similarity=0.433 Sum_probs=52.3
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCc-----chHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRG-----ASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~-----~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|...+.||+|+||.||+|.....+. .||||.+...... ....+..|+.++++++|+||+++++++
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~--~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~ 71 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGR--IVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVF 71 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCc--EEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhhee
Confidence 5666889999999999999765433 8999999754322 234577899999999999999999876
No 268
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=97.77 E-value=2.9e-05 Score=77.36 Aligned_cols=67 Identities=27% Similarity=0.435 Sum_probs=53.4
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
++|...+.||+|+||.||+|+....+ ..+|||.+.... .....+|.+|+.++++++||||+++++++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~--~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~ 71 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDG--VPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASF 71 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCC--ceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhhee
Confidence 45777789999999999999965443 389999886432 12235788999999999999999999875
No 269
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=97.77 E-value=5e-05 Score=78.78 Aligned_cols=69 Identities=19% Similarity=0.330 Sum_probs=54.7
Q ss_pred hhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 644 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 644 ~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..++|...+.||+|+||.||+|..... +..||||++.... ....+.+.+|+.++++++||||+++++++
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 83 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRT--GAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVF 83 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCC--CcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeee
Confidence 456788889999999999999986544 3489999985432 12234688999999999999999998865
No 270
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=97.76 E-value=4.7e-05 Score=76.94 Aligned_cols=66 Identities=26% Similarity=0.364 Sum_probs=54.1
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||++.....+. .||+|.+.... .+..+.+.+|++++++++||||+++++++
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 70 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGK--YYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSF 70 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCC--EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEE
Confidence 57777899999999999999865433 89999996432 22345688999999999999999999874
No 271
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=97.76 E-value=4.5e-05 Score=79.59 Aligned_cols=69 Identities=19% Similarity=0.255 Sum_probs=55.1
Q ss_pred hhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 644 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 644 ~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
...+|...+.||+|+||.||++..... +..||||++.... ......+.+|+.+++.++||||+++++++
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 85 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 85 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCC--CceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeee
Confidence 456788889999999999999985433 3489999996432 22235678999999999999999999875
No 272
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=97.76 E-value=5.8e-05 Score=77.12 Aligned_cols=68 Identities=25% Similarity=0.505 Sum_probs=54.4
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.++|...+.||+|+||.||+|+.... +..||||.+.... ......+.+|+.++++++||||++++++|
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~--~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 80 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKT--KQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEIC 80 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCC--CcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEE
Confidence 45688889999999999999997654 3489999986432 22234567899999999999999999876
No 273
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=97.76 E-value=3.6e-05 Score=79.64 Aligned_cols=68 Identities=19% Similarity=0.323 Sum_probs=54.8
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..+|...+.||+|+||.||+|+...++ ..||+|.+.... ......+.+|+.++.+++|||||++++++
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 72 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTG--VKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDII 72 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCC--CeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhhee
Confidence 467888899999999999999975443 489999996432 22345688999999999999999998764
No 274
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=97.76 E-value=2.7e-05 Score=86.49 Aligned_cols=76 Identities=26% Similarity=0.472 Sum_probs=58.8
Q ss_pred HHHHhhcCCccccccCcCCCceEEEEEECCCC-----ceeEEEEEEeeccCC-cchHHHHHHHHHHhcC-CCCCcceEEE
Q 046340 640 NLIKATDGFSLENLIGAGSFGSVYKGILNHDD-----HETLVAVKVLNLQHR-GASKSFMAQCQALRSV-RHRNLVKIIT 712 (715)
Q Consensus 640 ~~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~-----~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~-~h~niv~l~g 712 (715)
.|+...+++...+.+|+|.||.||+|.+.+.. ....||||+++.... .+.+++..|+++|..+ +|||||+++|
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 34555555555679999999999999964221 145799999986543 3456899999999998 7999999999
Q ss_pred EeC
Q 046340 713 SCA 715 (715)
Q Consensus 713 ~~~ 715 (715)
+|.
T Consensus 370 ~~t 372 (609)
T KOG0200|consen 370 ACT 372 (609)
T ss_pred eec
Confidence 995
No 275
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=97.75 E-value=7.6e-05 Score=74.34 Aligned_cols=65 Identities=32% Similarity=0.524 Sum_probs=51.0
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCc---------chHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRG---------ASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~---------~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|.....||+|+||.||+|.....+ ..||+|.+...... ..+.+.+|+.++.+++||||++++|++
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 75 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSG--ELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSS 75 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCC--cEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 445678999999999999965443 38999988643221 124688999999999999999999975
No 276
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=97.75 E-value=4.7e-05 Score=76.97 Aligned_cols=69 Identities=29% Similarity=0.489 Sum_probs=55.0
Q ss_pred cCCccccccCcCCCceEEEEEECC---CCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNH---DDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~---~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
++|...+.||+|+||.||+|+..+ ......+|+|.+........+.+.+|+.++++++||||++++|++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 76 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVC 76 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEE
Confidence 356777899999999999998543 123346899998755444456799999999999999999999986
No 277
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=97.75 E-value=3.6e-05 Score=77.93 Aligned_cols=73 Identities=23% Similarity=0.445 Sum_probs=56.5
Q ss_pred HHhhcCCccccccCcCCCceEEEEEECCCC---ceeEEEEEEeeccCC-cchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 642 IKATDGFSLENLIGAGSFGSVYKGILNHDD---HETLVAVKVLNLQHR-GASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 642 ~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~---~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
+...++|...+.||+|+||.||+|...+.. ....+|+|++..... +...++.+|+.++.++ +||||++++|+|
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 85 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVC 85 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 444566778889999999999999975421 224799999975322 2335688999999999 899999999986
No 278
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=97.75 E-value=6e-05 Score=77.00 Aligned_cols=68 Identities=26% Similarity=0.437 Sum_probs=54.5
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC--cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR--GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~--~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..+|...+.||+|+||.||+|+.... +..||+|.++.... .....+.+|+.++.+++|+||+++++++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 75 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTS--GEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVV 75 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCC--CcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEE
Confidence 45788889999999999999997654 34899999974432 1223567899999999999999999875
No 279
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.75 E-value=6.3e-05 Score=76.26 Aligned_cols=67 Identities=22% Similarity=0.388 Sum_probs=55.3
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..|+..+.||.|+||.||+|..... +..||+|.+........+.+.+|+++++.++|||+++++|++
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~--~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 85 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVAT--GQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSF 85 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCC--CcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeE
Confidence 3477778999999999999986444 348999999755444456789999999999999999999976
No 280
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=97.75 E-value=6e-05 Score=77.59 Aligned_cols=61 Identities=23% Similarity=0.348 Sum_probs=49.0
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+.||+|+||.||+++.... +..||||.+.... ......+.+|+.++++++||||+++++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~ 64 (328)
T cd05593 1 KLLGKGTFGKVILVREKAS--GKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSF 64 (328)
T ss_pred CeeeeCCCEEEEEEEECCC--CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE
Confidence 3689999999999996544 3489999997432 22345788999999999999999998875
No 281
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=97.75 E-value=5.7e-05 Score=75.57 Aligned_cols=69 Identities=26% Similarity=0.486 Sum_probs=57.5
Q ss_pred HhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 643 KATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 643 ~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
.++++|+..+.||+|+||.||+|+....+ ..+|+|.+..... ..++|.+|+.+++++ +||||++++|++
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~--~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 72 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTG--QLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAF 72 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCC--cEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEE
Confidence 45678898999999999999999976543 3899999875432 346799999999999 799999999986
No 282
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=97.75 E-value=3.4e-05 Score=80.37 Aligned_cols=66 Identities=26% Similarity=0.323 Sum_probs=53.7
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||+|+...+ +..||||.+.... ......+.+|+.++..++||||+++++++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~ 70 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDT--GQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSF 70 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCC--CCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhe
Confidence 577789999999999999997644 3489999997432 23345788999999999999999998764
No 283
>PHA03207 serine/threonine kinase US3; Provisional
Probab=97.74 E-value=4.8e-05 Score=80.46 Aligned_cols=65 Identities=20% Similarity=0.320 Sum_probs=53.1
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
...|...+.||+|+||.||++...+...+..||||.+... +.+.+|+.++++++|||||++++++
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~ 155 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAY 155 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeE
Confidence 3468888999999999999998755445568999998643 2357899999999999999998764
No 284
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=97.74 E-value=4.4e-05 Score=76.53 Aligned_cols=70 Identities=24% Similarity=0.463 Sum_probs=55.4
Q ss_pred hcCCccccccCcCCCceEEEEEECCC---CceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHD---DHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~---~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.++|...+.||+|+||.||+|...+. .....||+|.+..... .....|.+|+.++.+++||||++++|++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~ 78 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVV 78 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEE
Confidence 45677789999999999999997532 2335799999864432 2345788999999999999999999986
No 285
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.74 E-value=2.9e-05 Score=78.35 Aligned_cols=66 Identities=18% Similarity=0.306 Sum_probs=52.9
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|+..+.||+|+||.||++..... +..||+|.+.... .....++.+|+.++.+++||||++++|++
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~--~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~ 68 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPT--GVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAF 68 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCC--CcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhhe
Confidence 466778999999999999997644 3489999986432 22235788999999999999999998864
No 286
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=97.74 E-value=7.2e-05 Score=74.34 Aligned_cols=65 Identities=31% Similarity=0.462 Sum_probs=53.6
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC--cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR--GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~--~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|...+.||+|+||.||+|+...++ ..||+|.++.... ...+.+.+|+.++++++|+||++++|++
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~--~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~ 68 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTG--ELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVE 68 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCC--cEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeE
Confidence 556688999999999999975443 3899999975433 2456789999999999999999999875
No 287
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=97.74 E-value=6.8e-05 Score=75.51 Aligned_cols=65 Identities=22% Similarity=0.296 Sum_probs=52.1
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCc---chHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRG---ASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~---~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|+..+.||+|+||.||++.....+ ..||||.+...... ....+.+|+.++++++|++++++++++
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~--~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~ 69 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATG--KMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAY 69 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCC--ceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEE
Confidence 566688999999999999976553 48999999754322 224577899999999999999998875
No 288
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=97.74 E-value=4.7e-05 Score=75.43 Aligned_cols=62 Identities=34% Similarity=0.667 Sum_probs=49.1
Q ss_pred cccCcCCCceEEEEEECCCCc--------eeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDH--------ETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~--------~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|...+... ...+|+|.+...... ...|.+|+.++++++||||++++|+|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~ 70 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVC 70 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEE
Confidence 368999999999999865421 135788887644332 56799999999999999999999987
No 289
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=97.74 E-value=6.8e-05 Score=74.19 Aligned_cols=65 Identities=26% Similarity=0.482 Sum_probs=53.3
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|+..+.||+|+||.||+|.+.++ . .+|+|.+.... ....+|.+|++++++++|||++++++++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~-~--~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 68 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEK-R--KVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVC 68 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCC-C--eEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence 3566778999999999999987543 2 79999986432 2346799999999999999999999885
No 290
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=97.74 E-value=4.1e-05 Score=79.28 Aligned_cols=68 Identities=21% Similarity=0.364 Sum_probs=54.4
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeecc--CCcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQ--HRGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~--~~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
..+|...+.||+|+||.||+|....++ ..||||++... .......+.+|+.+++++ +||||++++|+|
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~--~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~ 76 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTK--EVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVI 76 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCC--eEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeee
Confidence 456777899999999999999976443 48999998532 222335678899999999 999999999986
No 291
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=97.73 E-value=7.9e-05 Score=74.98 Aligned_cols=67 Identities=22% Similarity=0.267 Sum_probs=50.9
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cchHHHHHHHHH-HhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GASKSFMAQCQA-LRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~-l~~~~h~niv~l~g~~ 714 (715)
++|+..+.||+|+||.||+|+...+ +..||+|+++.... ....++..|+.+ ++..+|||||++++++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~ 69 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPT--GTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGAL 69 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCC--CcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEE
Confidence 3677788999999999999997654 34899999975422 223456667765 5567999999999986
No 292
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=97.73 E-value=5.7e-05 Score=77.64 Aligned_cols=63 Identities=24% Similarity=0.392 Sum_probs=48.9
Q ss_pred cccCcCCCceEEEEEECC-CCceeEEEEEEeeccC----CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNH-DDHETLVAVKVLNLQH----RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~-~~~~~~~avk~l~~~~----~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+.||+|+||.||+++... ...+..||||.++... ......+.+|+.++++++|||||++++++
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~ 69 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAF 69 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEE
Confidence 579999999999998642 2234589999997432 12234578999999999999999999875
No 293
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=97.73 E-value=8.2e-05 Score=74.04 Aligned_cols=64 Identities=28% Similarity=0.634 Sum_probs=50.9
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC------cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR------GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~------~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|...+.||+|+||.||+|....+ ..+|||.++.... .....+.+|+.++++++|+||++++|+|
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~---~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 71 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQG---QLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTC 71 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCC---CeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEe
Confidence 55668899999999999986433 3799999864321 1124588999999999999999999986
No 294
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.73 E-value=5.8e-05 Score=77.91 Aligned_cols=70 Identities=21% Similarity=0.393 Sum_probs=54.8
Q ss_pred HhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC----C-cchHHHHHHHHHHhcCC-CCCcceEEEEe
Q 046340 643 KATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH----R-GASKSFMAQCQALRSVR-HRNLVKIITSC 714 (715)
Q Consensus 643 ~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~----~-~~~~~~~~e~~~l~~~~-h~niv~l~g~~ 714 (715)
...+.|...+.||+|+||+||.|+....+ ..||+|.+.... . ...+...+|+.++++++ ||||++++.+.
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~--~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~ 89 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTG--EKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVF 89 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCC--CeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEE
Confidence 44667888899999999999999876543 489999775431 1 12345668999999998 99999998764
No 295
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.72 E-value=5.6e-05 Score=75.57 Aligned_cols=69 Identities=23% Similarity=0.395 Sum_probs=56.7
Q ss_pred HhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcc-hHHHHHHHHHHhcCCCCCcceEEEE
Q 046340 643 KATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGA-SKSFMAQCQALRSVRHRNLVKIITS 713 (715)
Q Consensus 643 ~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~-~~~~~~e~~~l~~~~h~niv~l~g~ 713 (715)
....+|+...+||.|.-+.||+|+....+. .||||++.-.+... .+..++|+..|+-++|||||+.+..
T Consensus 23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e--~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~s 92 (516)
T KOG0582|consen 23 LNAKDYELQEVIGVGASAVVYLARCIPTNE--VVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCS 92 (516)
T ss_pred CCccceeEEEEEeccceeEeeeeeecccCC--EEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEE
Confidence 345678888999999999999999876654 89999997554333 3678999999999999999998764
No 296
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=97.72 E-value=8.1e-05 Score=73.98 Aligned_cols=66 Identities=23% Similarity=0.310 Sum_probs=55.2
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|+..+.||+|+||.||+|+.... +..||||++..... ...+++.+|+.++.+++|||++++++++
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~--~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 68 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPT--GKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAF 68 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCC--CcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 577779999999999999997654 34899999975533 3356799999999999999999999876
No 297
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=97.72 E-value=5.8e-05 Score=75.95 Aligned_cols=65 Identities=25% Similarity=0.498 Sum_probs=52.3
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|+..+.||+|++|.||+|+...++ ..||+|++.... ....+.+.+|++++++++|||++++++++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~--~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~ 67 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTG--EIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVV 67 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCC--CEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhhee
Confidence 445678999999999999976543 389999997443 22235688999999999999999999886
No 298
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=97.72 E-value=6e-05 Score=78.83 Aligned_cols=66 Identities=23% Similarity=0.271 Sum_probs=53.6
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|+..+.||+|+||.||+++...++ ..||+|.++... ......+.+|+.++.+++||+||++++++
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~ 70 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTG--HIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSF 70 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCC--CEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 5777789999999999999976553 489999996432 22345688999999999999999999864
No 299
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=97.71 E-value=9.1e-05 Score=73.75 Aligned_cols=66 Identities=29% Similarity=0.452 Sum_probs=54.4
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|+..+.||.|+||.||+|...+++ ..+|+|.+.... ....+.+.+|+++++.++|+||+++++++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~--~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 68 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNN--EKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSF 68 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCC--cEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEE
Confidence 5777899999999999999976543 389999996433 22456799999999999999999999865
No 300
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=97.71 E-value=6.2e-05 Score=75.71 Aligned_cols=75 Identities=24% Similarity=0.451 Sum_probs=60.0
Q ss_pred hHHHHHHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 637 SYQNLIKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 637 ~~~~~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
+..++..+.+.|+..+.+|+|+||.||+|+....+ ..+|+|...... ....++..|+.++.++ +||||++++|++
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~--~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 82 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTG--QLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAF 82 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCC--cEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeeh
Confidence 44555667788888899999999999999976543 389999986442 2345688999999998 799999999875
No 301
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=97.71 E-value=6.5e-05 Score=77.47 Aligned_cols=67 Identities=24% Similarity=0.387 Sum_probs=53.5
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
++|...+.||+|+||.||+++....+ ..||+|.+.... ......+.+|+.++...+|++|+++++++
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~ 70 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTE--RIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAF 70 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCC--CEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 35777899999999999999976553 389999996432 22234578899999999999999999875
No 302
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=97.71 E-value=4.6e-05 Score=74.26 Aligned_cols=67 Identities=22% Similarity=0.370 Sum_probs=52.4
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEee--ccCCcchHHHHHHHHHHhcCCCCCcceEEEE
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLN--LQHRGASKSFMAQCQALRSVRHRNLVKIITS 713 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~--~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~ 713 (715)
...|...+.||+|+||.|..+.-..+ +..||+|++. -.+.-..+...||++++++++|+||+.++..
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t--~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di 89 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRT--GEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDI 89 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCC--CCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEee
Confidence 34455567899999999999996554 4599999996 2333345668899999999999999998754
No 303
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=97.71 E-value=5.6e-05 Score=78.01 Aligned_cols=66 Identities=18% Similarity=0.249 Sum_probs=53.6
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||+++....+ ..||+|.++... ....+.+.+|+.+++.++||||+++++++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~ 70 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATG--DIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAF 70 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCC--CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEE
Confidence 5777899999999999999976543 489999997432 22345688999999999999999998865
No 304
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.70 E-value=6.4e-05 Score=78.74 Aligned_cols=69 Identities=20% Similarity=0.252 Sum_probs=55.1
Q ss_pred hhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 644 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 644 ~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
...+|...+.||+|+||.||++..... +..||||++.... ....+.+.+|+.+++.++||||+++++++
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~ 92 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF 92 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCC--CcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceee
Confidence 356788889999999999999986544 3489999996432 22345688999999999999999998864
No 305
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=97.70 E-value=6.8e-05 Score=75.19 Aligned_cols=66 Identities=29% Similarity=0.449 Sum_probs=53.5
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.|+..+.||.|+||.||+|+...++ ..||+|.+.... ......+.+|+.++++++||||+++++++
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 71 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQ--QVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 71 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCC--EEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 4556688999999999999975543 389999987442 23346789999999999999999999986
No 306
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.70 E-value=8.6e-06 Score=81.83 Aligned_cols=64 Identities=25% Similarity=0.461 Sum_probs=50.0
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHH--HHHHHHHhcCC-CCCcceEEEE
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSF--MAQCQALRSVR-HRNLVKIITS 713 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~--~~e~~~l~~~~-h~niv~l~g~ 713 (715)
.|...+.+|.|.||.||+|+-... +..||||+++..- ..++++ .||+..++++. |||||++..+
T Consensus 11 RY~~i~klGDGTfGsV~la~~~~~--~~~VAIK~MK~Kf-~s~ee~~nLREvksL~kln~hpniikL~Ev 77 (538)
T KOG0661|consen 11 RYTVIRKLGDGTFGSVYLAKSKET--GELVAIKKMKKKF-YSWEECMNLREVKSLRKLNPHPNIIKLKEV 77 (538)
T ss_pred HHHHHHHhcCCcceeEEEeeecCC--CceeeHHHHHhhh-ccHHHHHHHHHHHHHHhcCCCCcchhhHHH
Confidence 455568899999999999996554 3489999997542 234544 59999999998 9999998653
No 307
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=97.70 E-value=5.3e-05 Score=86.13 Aligned_cols=72 Identities=17% Similarity=0.351 Sum_probs=58.0
Q ss_pred HHHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 641 LIKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 641 ~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+....+|...+.||+|+||.||+++..... ..||+|.+.... ......|.+|+.++++++|||||++++++
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg--~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f 81 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQ--EFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRF 81 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCC--eEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEE
Confidence 3445678888999999999999999976553 489999986432 22345789999999999999999999864
No 308
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=97.69 E-value=7.7e-05 Score=75.29 Aligned_cols=65 Identities=29% Similarity=0.557 Sum_probs=49.5
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC--cchHHHHHHHHHHhcC---CCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR--GASKSFMAQCQALRSV---RHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~--~~~~~~~~e~~~l~~~---~h~niv~l~g~~ 714 (715)
|...+.||+|+||.||+|+...++ ..||+|.++.... .....+.+|+.++.++ +||||+++++++
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~ 71 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPHSG--HFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVC 71 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECCCC--cEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeee
Confidence 666788999999999999976543 4899999974322 2234567788777655 799999999875
No 309
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=97.69 E-value=3.5e-05 Score=77.27 Aligned_cols=65 Identities=29% Similarity=0.492 Sum_probs=52.0
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|+..+.||+|+||.||+|....++ ..||+|.++... ....+.+.+|+.++++++||||+++++++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 71 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTK--EVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSY 71 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCC--eEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhccc
Confidence 455578999999999999975543 489999986433 23345789999999999999999999875
No 310
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=97.69 E-value=7e-05 Score=74.28 Aligned_cols=65 Identities=28% Similarity=0.528 Sum_probs=53.2
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+.|.....||+|+||.||+|...++ . .+|+|.+..... ..+.|.+|+.++++++|||++++++++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~--~~~lK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~ 70 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-T--KVAIKTLKPGTM-MPEAFLQEAQIMKKLRHDKLVPLYAVV 70 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-c--eEEEEEcccCCc-cHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence 4467778999999999999997654 2 689999865432 346789999999999999999999875
No 311
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=97.69 E-value=8.9e-05 Score=74.74 Aligned_cols=69 Identities=22% Similarity=0.355 Sum_probs=57.2
Q ss_pred HhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 643 KATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 643 ~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.....|...+.+|+|+||.||+|.....+. .||+|.+..... ..+.+.+|++++++++|+|++++++++
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~--~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~ 84 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGK--EVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSY 84 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCc--EEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEE
Confidence 446667778899999999999999864433 899999975543 456789999999999999999999875
No 312
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=97.69 E-value=7.1e-05 Score=77.00 Aligned_cols=65 Identities=28% Similarity=0.422 Sum_probs=48.5
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHH---hcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQAL---RSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l---~~~~h~niv~l~g~~ 714 (715)
|...+.||+|+||.||+|.....+ ..||||.++... ....+.+.+|+.++ .+++||||++++|++
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~ 71 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTG--ELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACF 71 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCC--CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEE
Confidence 445678999999999999976543 389999997432 22234566676654 577899999999975
No 313
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=97.69 E-value=8.8e-05 Score=73.72 Aligned_cols=66 Identities=23% Similarity=0.430 Sum_probs=52.6
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.+|.|+||.||++....++ ..||+|++.... ....+.+.+|+.++++++||||+++++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 68 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDG--KILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRI 68 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCC--CEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeee
Confidence 3566788999999999999865543 489999996432 22345688999999999999999998865
No 314
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=97.68 E-value=6.2e-05 Score=75.97 Aligned_cols=66 Identities=21% Similarity=0.260 Sum_probs=52.3
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCC-CCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVR-HRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~-h~niv~l~g~~ 714 (715)
+|.....||+|+||.||+++....+ ..||+|.+..... .....+.+|+.++.++. |||||+++|++
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~ 72 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSG--TIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGAL 72 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCC--CEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEE
Confidence 4455578999999999999976543 4899999974432 23457889999999996 99999999975
No 315
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=97.68 E-value=8.2e-05 Score=76.67 Aligned_cols=61 Identities=20% Similarity=0.256 Sum_probs=48.7
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccCC---cchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR---GASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~---~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|+....+ ..||||.++.... ...+.+.+|+.++.++ +|||||++++++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~--~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~ 65 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTR--RIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCF 65 (329)
T ss_pred CeEeeCCCeEEEEEEECCCC--CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEE
Confidence 46899999999999976553 3899999975321 2234578999999998 799999999875
No 316
>PHA03209 serine/threonine kinase US3; Provisional
Probab=97.67 E-value=6.7e-05 Score=78.25 Aligned_cols=64 Identities=17% Similarity=0.281 Sum_probs=51.9
Q ss_pred HhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 643 KATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 643 ~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
....+|...+.||+|+||.||+|+....+ ..||+|..... ....|+.++++++|||||++++++
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~--~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~ 126 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQP--DPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTL 126 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCC--ceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheE
Confidence 33457888999999999999999976553 38999975422 246799999999999999999876
No 317
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=97.67 E-value=0.00011 Score=72.59 Aligned_cols=66 Identities=23% Similarity=0.321 Sum_probs=53.1
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|+..+.||+|+||.||+++...++ ..+|+|.++... ....+.+.+|+.++++++||||+++++++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~--~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 67 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSD--QKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESF 67 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCC--ceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence 3566789999999999999976543 389999986432 23346788999999999999999999875
No 318
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=97.67 E-value=5.3e-05 Score=76.44 Aligned_cols=66 Identities=23% Similarity=0.448 Sum_probs=54.3
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|+..+.||+|+||.||+|+..+++ ..||||.++... ....+.+.+|++++++++|+||+++++++
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~--~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 69 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATG--EIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAF 69 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCC--cEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheE
Confidence 5677789999999999999976553 389999986432 22346789999999999999999999876
No 319
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=97.67 E-value=8.3e-05 Score=76.78 Aligned_cols=66 Identities=24% Similarity=0.378 Sum_probs=53.4
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||+++...++. .+|+|.+.... ......|.+|+.++..++|++|+++++++
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~ 70 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADK--VFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAF 70 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCC--EEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEE
Confidence 57778999999999999999876544 89999996421 22234588999999999999999998875
No 320
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=97.66 E-value=9.3e-05 Score=75.40 Aligned_cols=66 Identities=23% Similarity=0.312 Sum_probs=54.2
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||++.....+ ..||+|.+.... ....+.+.+|+.+++.++||||+++++++
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~--~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~ 70 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETR--QRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSF 70 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCC--cEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE
Confidence 5777899999999999999976553 489999997543 22345788999999999999999999875
No 321
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=97.66 E-value=9.8e-05 Score=74.05 Aligned_cols=66 Identities=27% Similarity=0.443 Sum_probs=53.1
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC-CcchHHHHHHHHHHhcCC---CCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-RGASKSFMAQCQALRSVR---HRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~---h~niv~l~g~~ 714 (715)
.|+..+.||+|+||.||+|.....+ ..||+|.+.... ....+++.+|+.++++++ |||+++++|+|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~--~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~ 71 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTG--RVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSY 71 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCC--cEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeee
Confidence 3566688999999999999975543 389999986442 333567899999999986 99999999976
No 322
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=97.66 E-value=2.3e-05 Score=77.70 Aligned_cols=63 Identities=32% Similarity=0.553 Sum_probs=49.5
Q ss_pred cccCcCCCceEEEEEECCCCc-----eeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDH-----ETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~-----~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|....... ...||+|.+........+.|.+|+.+++.++|||||+++|++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~ 68 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVC 68 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEE
Confidence 358999999999998643211 235888988655444456789999999999999999999986
No 323
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=97.66 E-value=6.9e-05 Score=74.16 Aligned_cols=66 Identities=23% Similarity=0.410 Sum_probs=53.3
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||+|....+.. .+|+|.+.... ....+.+.+|+.++++++|+||+++++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~--~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~ 68 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSE--HCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASF 68 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCc--eEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhhee
Confidence 35667889999999999999865433 79999996532 23345788999999999999999999875
No 324
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=97.66 E-value=6.5e-05 Score=74.73 Aligned_cols=66 Identities=20% Similarity=0.282 Sum_probs=53.7
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|+..+.||+|+||.||++.....+. .||+|++..... ...+++.+|++++++++||||+++++++
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~--~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~ 68 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGK--IMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAF 68 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCc--EEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheee
Confidence 46667889999999999999865433 899999975532 3345789999999999999999998875
No 325
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=97.66 E-value=4.5e-05 Score=75.54 Aligned_cols=66 Identities=27% Similarity=0.438 Sum_probs=52.6
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||.|+||.||+|+....+ ..||+|.+.... ....+.+.+|+.++++++||||+++++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~--~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 69 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTK--KMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSF 69 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCC--cEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhh
Confidence 3667789999999999999976443 489999997432 13356789999999999999999887653
No 326
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=97.65 E-value=9.5e-05 Score=76.18 Aligned_cols=61 Identities=20% Similarity=0.275 Sum_probs=48.1
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|+...++. .||+|.++... ....+.+.+|+.++.++ +|||||++++++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~ 65 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTER--IYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF 65 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCC--EEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEE
Confidence 468999999999999766544 89999997542 12234577899998876 899999999875
No 327
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=97.65 E-value=6.2e-05 Score=74.38 Aligned_cols=63 Identities=27% Similarity=0.559 Sum_probs=52.1
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|...+.||+|+||.||+|...+. .||+|..+... ..+.+.+|+.++++++|||++++++++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~----~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~ 68 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEYTGQ----KVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVI 68 (254)
T ss_pred HHceeeeeeccCCCCceEecccCCC----ceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEE
Confidence 4577789999999999999985433 79999986432 245789999999999999999999975
No 328
>PRK10345 hypothetical protein; Provisional
Probab=97.65 E-value=0.00011 Score=69.11 Aligned_cols=62 Identities=13% Similarity=0.233 Sum_probs=47.9
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcC-----CCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSV-----RHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~-----~h~niv~l~g~~ 714 (715)
......||+|+||.||. .+... ..+||++........+++.+|+.++.++ +||||++++|+.
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~---~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~ 70 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDA---QRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTV 70 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCc---CeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEE
Confidence 34457899999999996 44332 2479988765444557899999999999 679999999874
No 329
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=97.64 E-value=0.00014 Score=71.83 Aligned_cols=65 Identities=40% Similarity=0.654 Sum_probs=53.6
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC--cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR--GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~--~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|...+.||+|+||.||+|+....+ ..||+|.+..... ...+.+.+|++++++++|||++++++++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~--~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 68 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETG--DFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSI 68 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCC--cEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEE
Confidence 566788999999999999976543 3899999975543 3346789999999999999999999875
No 330
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=97.64 E-value=0.0001 Score=74.71 Aligned_cols=66 Identities=23% Similarity=0.388 Sum_probs=52.8
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC--cchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR--GASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~--~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||+|+...++ ..||+|..+.... .....+.+|+.+++++ +||||+++++++
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~--~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~ 70 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTG--KLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVE 70 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCC--cEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeE
Confidence 5777889999999999999976543 3899999864322 2235788999999999 569999999875
No 331
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.64 E-value=6.3e-05 Score=76.60 Aligned_cols=72 Identities=21% Similarity=0.433 Sum_probs=55.0
Q ss_pred HhhcCCccccccCcCCCceEEEEEECC-----CCceeEEEEEEeeccC-CcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 643 KATDGFSLENLIGAGSFGSVYKGILNH-----DDHETLVAVKVLNLQH-RGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 643 ~~~~~f~~~~~lg~g~~g~vy~~~~~~-----~~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
....+|...+.||+|+||.||+|+... ...+..||+|.+.... ....+++.+|+.++..+ +||||+++++++
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 90 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 90 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEE
Confidence 345567778999999999999998521 1123479999986432 23346789999999999 899999999976
No 332
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=97.64 E-value=0.00013 Score=72.19 Aligned_cols=66 Identities=30% Similarity=0.465 Sum_probs=54.0
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC--cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR--GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~--~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||+|++|.||+|+...++ ..|++|.+..... ...+.+.+|+.++++++||||+++++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~--~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 68 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTG--ELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSE 68 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCC--cEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEE
Confidence 3566788999999999999976443 3899999975442 3356789999999999999999999875
No 333
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=97.63 E-value=6.7e-05 Score=76.67 Aligned_cols=68 Identities=22% Similarity=0.430 Sum_probs=54.5
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCc--chHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRG--ASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~--~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.++|...+.||+|+||.||+|+....+. .||||++...... ....+.+|++++++++||||+++++++
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~--~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 76 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGR--VVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMA 76 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCc--EEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhhe
Confidence 4678888999999999999999765433 8999998643322 234678999999999999999988753
No 334
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=97.63 E-value=0.00014 Score=71.55 Aligned_cols=66 Identities=32% Similarity=0.519 Sum_probs=55.1
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|+..+.||+|++|.||+++...++. .+|+|++........+.+.+|++++++++||+++++++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~--~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 66 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGK--EVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSY 66 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCc--EEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEE
Confidence 36667889999999999999865433 8999999765444457899999999999999999999875
No 335
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=97.63 E-value=0.00011 Score=75.30 Aligned_cols=66 Identities=26% Similarity=0.337 Sum_probs=54.1
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCc---chHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRG---ASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~---~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||+|...+. +..||+|.+...... ..+.+.+|++++.+++||||+++++++
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 70 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGT--GKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASF 70 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCC--CcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeee
Confidence 577778999999999999997654 348999999754322 345688999999999999999999875
No 336
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=97.63 E-value=0.00012 Score=74.76 Aligned_cols=65 Identities=26% Similarity=0.411 Sum_probs=51.7
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC---cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR---GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~---~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|...+.||+|+||+||+|+...+ +..||+|.+..... ...+.+.+|+.++++++|||++++++++
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~--~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 90 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHT--NEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCY 90 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCC--CcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEE
Confidence 44457799999999999997544 34899999975432 2235688999999999999999999986
No 337
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=97.63 E-value=0.0001 Score=75.59 Aligned_cols=61 Identities=30% Similarity=0.409 Sum_probs=48.3
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|+...++. .||||.++... ......+.+|++++..+ +||||+++++++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~ 65 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDE--LYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCF 65 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCC--EEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEE
Confidence 368999999999999865544 89999997432 22345677899999887 799999999875
No 338
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=97.63 E-value=8.9e-05 Score=76.38 Aligned_cols=62 Identities=18% Similarity=0.218 Sum_probs=49.1
Q ss_pred ccccCcC--CCceEEEEEECCCCceeEEEEEEeeccCC--cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 651 ENLIGAG--SFGSVYKGILNHDDHETLVAVKVLNLQHR--GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 651 ~~~lg~g--~~g~vy~~~~~~~~~~~~~avk~l~~~~~--~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.++||+| +||+||+++...+ +..||+|+++.... ...+.+.+|+.+++.++|||||+++++|
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~ 68 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPT--GEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATF 68 (327)
T ss_pred hhhccccccceEEEEEEeeccc--CcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 4679999 7889999997654 34899999975422 2234577899999999999999999986
No 339
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=97.63 E-value=0.0001 Score=76.78 Aligned_cols=68 Identities=19% Similarity=0.238 Sum_probs=54.6
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeecc--CCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQ--HRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~--~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
...|...+.||+|+||.||+|+...+ +..||+|.+... .....+.+.+|+.++.+++||||+++++++
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 84 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVT--GQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVF 84 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCC--CCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeee
Confidence 46788889999999999999996544 348999998632 222335678999999999999999999874
No 340
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=97.63 E-value=0.0001 Score=74.08 Aligned_cols=59 Identities=25% Similarity=0.326 Sum_probs=46.8
Q ss_pred cCcCCCceEEEEEECCCCceeEEEEEEeeccCC---cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 654 IGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR---GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 654 lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~---~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
||+|+||+||+++.... +..||||.+..... ...+.+..|+.++++++||||+++.+++
T Consensus 1 lg~G~~g~Vy~~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~ 62 (280)
T cd05608 1 LGKGGFGEVSACQMRAT--GKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAF 62 (280)
T ss_pred CCCCCceeEEEEEEccC--CcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEE
Confidence 69999999999997644 34899999964321 2234678899999999999999998764
No 341
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=97.63 E-value=6.8e-05 Score=76.01 Aligned_cols=62 Identities=27% Similarity=0.390 Sum_probs=50.8
Q ss_pred ccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 651 ENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 651 ~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
...||+|+||.||+|....++ ..||+|.+........+.+.+|+.+++.++||||++++|++
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~--~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~ 87 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSG--RQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSY 87 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCC--CEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhhe
Confidence 457999999999999865443 38999999755444456788999999999999999999875
No 342
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=97.63 E-value=5e-05 Score=75.76 Aligned_cols=63 Identities=32% Similarity=0.592 Sum_probs=49.7
Q ss_pred cccCcCCCceEEEEEECCC----CceeEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHD----DHETLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~----~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|+..+. ..+..+|+|.+.... .....+|.+|+.++++++||||++++|+|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 68 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVC 68 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeee
Confidence 4689999999999997542 122479999986443 23346789999999999999999999986
No 343
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=97.62 E-value=0.00012 Score=72.33 Aligned_cols=66 Identities=21% Similarity=0.299 Sum_probs=53.3
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|+..+.||+|+||.||+++...++ ..||+|++.... ....+++.+|+.++++++||||+++++++
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~--~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 68 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDG--KQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESF 68 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCC--CEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeee
Confidence 3667789999999999999975543 489999986432 23345789999999999999999999875
No 344
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=97.62 E-value=0.00012 Score=72.41 Aligned_cols=63 Identities=30% Similarity=0.530 Sum_probs=52.3
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+|...+.||+|+||.||+|...+. .||+|..+.. ...+.|.+|+.++++++|+|+++++|++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~----~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 68 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYRGN----KVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVI 68 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEcCC----cEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence 3577779999999999999987543 7999998643 2346799999999999999999999874
No 345
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=97.62 E-value=8.6e-05 Score=80.63 Aligned_cols=67 Identities=16% Similarity=0.224 Sum_probs=52.9
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.|...+.||+|+||.||+|.-..+ .+..||+|.+..........+.+|+.+++.++|||||++++++
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~-~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~ 134 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSD-PKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDF 134 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCC-CCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEE
Confidence 377789999999999999985433 1347888877544333345678899999999999999999986
No 346
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=97.62 E-value=0.00013 Score=71.97 Aligned_cols=60 Identities=37% Similarity=0.646 Sum_probs=49.6
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccCCc-chHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRG-ASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~-~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+.||+|+||.||++...++ . .||+|.+...... ..+.|.+|+.++++++||||+++++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~-~--~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 61 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGN-T--EVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61 (251)
T ss_pred CccccCCCceEEEEEEeCC-C--cEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEE
Confidence 3689999999999997653 3 7999998754332 346799999999999999999999886
No 347
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=97.62 E-value=0.00012 Score=75.40 Aligned_cols=61 Identities=23% Similarity=0.321 Sum_probs=48.5
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+.||+|+||.||+++.... +..||+|.++... ......+.+|+.++..++||||+++++++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~--~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~ 64 (325)
T cd05594 1 KLLGKGTFGKVILVKEKAT--GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF 64 (325)
T ss_pred CeeeeCCCEEEEEEEECCC--CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEE
Confidence 3689999999999986544 3489999997432 22345678899999999999999998875
No 348
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=97.61 E-value=9.9e-05 Score=75.70 Aligned_cols=63 Identities=27% Similarity=0.288 Sum_probs=48.3
Q ss_pred cccCcCCCceEEEEEEC-CCCceeEEEEEEeeccCC--cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILN-HDDHETLVAVKVLNLQHR--GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~-~~~~~~~~avk~l~~~~~--~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+.||+|+||.||+++.. +...+..||+|.+..... .....+.+|++++++++|||||++++++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 67 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAF 67 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEE
Confidence 57999999999998752 122345899999975321 2234577899999999999999999875
No 349
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.61 E-value=5.5e-06 Score=85.74 Aligned_cols=61 Identities=25% Similarity=0.508 Sum_probs=51.1
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
-.+|-|+||+||++.-++ ++...|.|.+...+....++|.-||+|++.++||+||+|++++
T Consensus 38 GELGDGAFGKVyKA~nke--t~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ay 98 (1187)
T KOG0579|consen 38 GELGDGAFGKVYKAVNKE--TKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAY 98 (1187)
T ss_pred hhhcCccchhhhhhhccc--chhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHH
Confidence 568999999999999654 4447789999766555567899999999999999999998764
No 350
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=97.61 E-value=0.00014 Score=73.02 Aligned_cols=59 Identities=20% Similarity=0.330 Sum_probs=46.4
Q ss_pred cCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 654 IGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 654 lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
||+|+||.||+++.... +..||+|.+.... ......+..|++++.+++||||+++++++
T Consensus 1 lg~G~~g~Vy~~~~~~~--~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~ 62 (277)
T cd05607 1 LGKGGFGEVCAVQVKNT--GKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAF 62 (277)
T ss_pred CCCCCceEEEEEEEccC--CcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEE
Confidence 69999999999997654 3489999996432 12234566799999999999999998765
No 351
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=97.60 E-value=0.00015 Score=71.63 Aligned_cols=65 Identities=20% Similarity=0.324 Sum_probs=52.6
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|+..+.||+|+||.||.++...+ +..+|+|++.... .....++.+|+.++++++|+||+++++++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~ 68 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTED--DSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHF 68 (256)
T ss_pred ceEeeEecccCCceEEEEEEcCC--CcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEE
Confidence 56678999999999998886544 3489999986432 23346789999999999999999999985
No 352
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=97.60 E-value=0.00013 Score=75.51 Aligned_cols=63 Identities=16% Similarity=0.332 Sum_probs=49.1
Q ss_pred cccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcc--------------hHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 650 LENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGA--------------SKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 650 ~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~--------------~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..+.||+|+||.||+|..... +..||||.+....... ...+.+|++++++++|||||++++++
T Consensus 13 ~~~~ig~G~~g~vy~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 89 (335)
T PTZ00024 13 KGAHLGEGTYGKVEKAYDTLT--GKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVY 89 (335)
T ss_pred hhhcccCCCceeEEEEEECCC--CCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEE
Confidence 347799999999999996544 3489999986432111 12477999999999999999999985
No 353
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=97.60 E-value=0.00013 Score=74.93 Aligned_cols=61 Identities=26% Similarity=0.364 Sum_probs=47.7
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|+..+++. .||||.++... ....+.+..|++++..+ +||||+++++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~ 65 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDE--VYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCF 65 (321)
T ss_pred CccccCCCeEEEEEEECCCCC--EEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEE
Confidence 368999999999999765533 89999997532 22234577899999866 899999999875
No 354
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=97.59 E-value=0.00012 Score=73.93 Aligned_cols=61 Identities=28% Similarity=0.423 Sum_probs=50.5
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..||+|+||.||+|.....+ ..||||.+..........+.+|+.++++++|||+|++++++
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~--~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 86 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSG--KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCC--eEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEE
Confidence 56899999999999976543 38999998654444456789999999999999999999875
No 355
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=97.59 E-value=0.00014 Score=71.80 Aligned_cols=66 Identities=21% Similarity=0.411 Sum_probs=53.2
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|+..+.||+|+||.||++.....+ ..+|+|.+.... ....+.+.+|+.++++++||||++++++.
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~--~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~ 68 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQ--KLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENF 68 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCC--cEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeE
Confidence 3667789999999999999976553 489999997543 22345789999999999999999998763
No 356
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.59 E-value=9.4e-05 Score=75.71 Aligned_cols=71 Identities=23% Similarity=0.458 Sum_probs=53.9
Q ss_pred hhcCCccccccCcCCCceEEEEEECCC-----CceeEEEEEEeeccCC-cchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 644 ATDGFSLENLIGAGSFGSVYKGILNHD-----DHETLVAVKVLNLQHR-GASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 644 ~~~~f~~~~~lg~g~~g~vy~~~~~~~-----~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
...+|...+.||+|+||.||+|+..+. .....+|+|.+..... ....++.+|+.++.++ +|||||+++++|
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVC 87 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEE
Confidence 345677789999999999999975321 1224689999874322 2345688999999999 699999999986
No 357
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.59 E-value=8.9e-05 Score=76.63 Aligned_cols=74 Identities=19% Similarity=0.387 Sum_probs=55.3
Q ss_pred HHhhcCCccccccCcCCCceEEEEEECCC-----CceeEEEEEEeeccC-CcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 642 IKATDGFSLENLIGAGSFGSVYKGILNHD-----DHETLVAVKVLNLQH-RGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 642 ~~~~~~f~~~~~lg~g~~g~vy~~~~~~~-----~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
+....+|...+.||+|+||.||+++..+. .....||+|.++... ....+++.+|+.++.++ +|||||+++++|
T Consensus 8 ~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (334)
T cd05100 8 ELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGAC 87 (334)
T ss_pred ccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEE
Confidence 33344677789999999999999985321 112368999886432 22345789999999999 899999999987
Q ss_pred C
Q 046340 715 A 715 (715)
Q Consensus 715 ~ 715 (715)
.
T Consensus 88 ~ 88 (334)
T cd05100 88 T 88 (334)
T ss_pred c
Confidence 3
No 358
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.59 E-value=8.4e-05 Score=75.80 Aligned_cols=70 Identities=24% Similarity=0.463 Sum_probs=54.1
Q ss_pred hcCCccccccCcCCCceEEEEEECCCC-----ceeEEEEEEeeccC-CcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDD-----HETLVAVKVLNLQH-RGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~-----~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
..+|...+.||+|+||.||+++..+.+ ....+|+|.++... .....++.+|++++.++ +||||++++++|
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 93 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence 356788899999999999999864311 12369999997542 22335688999999999 899999999986
No 359
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=97.58 E-value=0.00015 Score=74.32 Aligned_cols=61 Identities=23% Similarity=0.381 Sum_probs=47.2
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhc-CCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRS-VRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~-~~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|+..+++. .||||.++... ....+.+..|..++.. .+||||+++++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~ 65 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQ--FFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTF 65 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCC--EEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEE
Confidence 368999999999999765533 89999997532 2233456778888876 4999999999875
No 360
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=97.58 E-value=8.2e-05 Score=76.92 Aligned_cols=66 Identities=23% Similarity=0.349 Sum_probs=53.3
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEE
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITS 713 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~ 713 (715)
.+|+..+.||+|+||.||+|+...++ ..||+|++.... ....+.+.+|+.++.+++|||||+++++
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~--~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 72 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSG--KKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDI 72 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCC--CEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHh
Confidence 67888899999999999999976543 489999996432 2234567889999999999999998764
No 361
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=97.58 E-value=0.00015 Score=71.81 Aligned_cols=63 Identities=33% Similarity=0.641 Sum_probs=51.0
Q ss_pred cccCcCCCceEEEEEECCC-CceeEEEEEEeeccCCc-chHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHD-DHETLVAVKVLNLQHRG-ASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~-~~~~~~avk~l~~~~~~-~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|+.... ..+..||+|.+...... ..+.+.+|++++.+++|+|++++++++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~ 65 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVC 65 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeee
Confidence 4689999999999998643 12348999999755432 256789999999999999999999886
No 362
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=97.57 E-value=7.3e-05 Score=74.09 Aligned_cols=64 Identities=30% Similarity=0.521 Sum_probs=50.7
Q ss_pred ccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcch--HHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 649 SLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGAS--KSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 649 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~--~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+..+.||+|+||.||+++...... .||+|.+........ ....+|+.++.+++||||++++++.
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~--~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~ 67 (260)
T PF00069_consen 2 RLVKKLGSGGFGTVYKAKNKKNGQ--KVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVF 67 (260)
T ss_dssp EEEEEEEEESSEEEEEEEETTTTE--EEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEE
T ss_pred EEeEEEEeCCCEEEEEEEECCCCe--EEEEEEeccccccccccchhhhhhhccccccccccccccccc
Confidence 445789999999999999876543 899999986543222 2345699999999999999998875
No 363
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=97.57 E-value=8.7e-05 Score=76.81 Aligned_cols=67 Identities=22% Similarity=0.311 Sum_probs=53.2
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeecc--CCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQ--HRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~--~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..|...+.||+|+||.||+|+...+ +..||||.+... .......+.+|+.+++.++||||+++++++
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~ 73 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSET--NEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIM 73 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCC--CCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHhe
Confidence 4677788999999999999996544 348999998643 222345678899999999999999988754
No 364
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=97.55 E-value=0.00012 Score=74.67 Aligned_cols=66 Identities=26% Similarity=0.345 Sum_probs=52.5
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.|...+.||+|+||.||+|+...+. ..+|+|.+.... .....++.+|++++++++|+|+++++|++
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 84 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNS--EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCY 84 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCC--cEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEE
Confidence 3555688999999999999976543 389999986432 12235688999999999999999999985
No 365
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.55 E-value=3.9e-05 Score=80.60 Aligned_cols=61 Identities=20% Similarity=0.421 Sum_probs=49.6
Q ss_pred ccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEeC
Q 046340 653 LIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSCA 715 (715)
Q Consensus 653 ~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~~ 715 (715)
++|+|.||+||.|+-.++ -+.+|||.++........-.-.||..-++++|+|||+.+|.|+
T Consensus 582 VLGKGTYG~VYA~RD~~t--qvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~s 642 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDT--QVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVS 642 (1226)
T ss_pred EeecCceeEEEeeccccc--eeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccC
Confidence 689999999999995444 4589999997554333344678999999999999999999885
No 366
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=97.55 E-value=9.9e-05 Score=80.25 Aligned_cols=70 Identities=19% Similarity=0.244 Sum_probs=55.2
Q ss_pred HHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC--cchHHHHHHHHHHhcCCCCCcceEEEE
Q 046340 642 IKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR--GASKSFMAQCQALRSVRHRNLVKIITS 713 (715)
Q Consensus 642 ~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~--~~~~~~~~e~~~l~~~~h~niv~l~g~ 713 (715)
+....+|...+.||+|+||.||+|+....+ ..||||.+..... .....+.+|+.++..++|+|+|+++++
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g--~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~ 99 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDG--EPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHED 99 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCC--CEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecc
Confidence 344578888999999999999999965443 3899999965432 233568899999999999999987653
No 367
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=97.55 E-value=2.9e-05 Score=73.75 Aligned_cols=67 Identities=24% Similarity=0.418 Sum_probs=51.4
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCce--eEEEEEEeeccCCcc--hHHHHHHHHHHhcCCCCCcceEE
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHE--TLVAVKVLNLQHRGA--SKSFMAQCQALRSVRHRNLVKII 711 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~--~~~avk~l~~~~~~~--~~~~~~e~~~l~~~~h~niv~l~ 711 (715)
...|+....||+|.||.||++.-.++... +.+|+|+++..+.+. .....||+..++.++|||||.+.
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv 93 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLV 93 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHH
Confidence 34566678899999999999975544332 368999998664321 24678999999999999999875
No 368
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=97.53 E-value=2.5e-05 Score=71.85 Aligned_cols=67 Identities=15% Similarity=0.217 Sum_probs=55.7
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+.|...+.+|+|||+-||.++--.. +..+|+|++...+.++.+...+|++.-++++||||++++.++
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~--~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~ 87 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLST--GHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQ 87 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCc--ccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHH
Confidence 4567778999999999999883333 348999999877666678899999999999999999987764
No 369
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=97.52 E-value=9.2e-05 Score=74.55 Aligned_cols=65 Identities=25% Similarity=0.496 Sum_probs=51.4
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC--cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR--GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~--~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|...+.||+|+||.||+|+....+ ..||+|+++.... .....+.+|+.++++++||||++++++.
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g--~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~ 68 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETH--EIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVL 68 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCC--cEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHh
Confidence 566688999999999999976543 4899999964322 2235688999999999999999987753
No 370
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=97.52 E-value=2.7e-06 Score=83.98 Aligned_cols=278 Identities=18% Similarity=0.135 Sum_probs=133.0
Q ss_pred CCCCEEEcccCcceecCCc--cccCCCCCCEEEeeccc-CcccCCccc-cCCCCCcEEEccCC-ccceecCcchhcCCCC
Q 046340 136 SSLEFLSAAANQFVGQFPE--TLSELKMMRYISFGENK-LSGEIPFSI-YNLSSLTHFYFPFN-QLQGSLPSDLGFTLPN 210 (715)
Q Consensus 136 ~~L~~L~l~~n~~~~~~~~--~l~~l~~L~~L~L~~n~-i~~~~~~~l-~~l~~L~~L~l~~n-~i~~~~~~~~~~~l~~ 210 (715)
..|+.|.+.++.-.+..+- .-..++++++|.+.++. +++..-..+ ..+++|++|++..+ .+++..-..+...+++
T Consensus 138 g~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~k 217 (483)
T KOG4341|consen 138 GFLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRK 217 (483)
T ss_pred cccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhh
Confidence 3567777777654432221 22566777777777765 222111111 24677777777763 4444444445556778
Q ss_pred CCEEEeeCcc-cccc-CCccccCCCCCCEEEeecccceecc---ccccCcCCCcEEEcccCC-CCCCCCCCccccccccc
Q 046340 211 LEVLNVGGNQ-FTGP-IPASISNASNLMRLTIAKNGFSGRV---PSLENLYKLQWVSISHNH-LGNYGEKDNLEFVNSLV 284 (715)
Q Consensus 211 L~~L~L~~n~-l~~~-~~~~l~~~~~L~~L~L~~n~~~~~~---~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~~~~~l~ 284 (715)
|++++++.+. +++. +...+.++..++.+.+.+|.-.+.- ..-.....+..+++.++. +++ ......-.
T Consensus 218 L~~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~e~~le~l~~~~~~~~~i~~lnl~~c~~lTD------~~~~~i~~ 291 (483)
T KOG4341|consen 218 LKYLNLSWCPQISGNGVQALQRGCKELEKLSLKGCLELELEALLKAAAYCLEILKLNLQHCNQLTD------EDLWLIAC 291 (483)
T ss_pred HHHhhhccCchhhcCcchHHhccchhhhhhhhcccccccHHHHHHHhccChHhhccchhhhccccc------hHHHHHhh
Confidence 8888887763 3321 1112344555555555543221110 001233334445544442 211 11222223
Q ss_pred cCCCCCEEEccCCc-ccccCChhHhhccccCcEEEccccce-eecCCccc-cCCCCCCEEEcCCceeeee--cCccccCC
Q 046340 285 NASRLELLEISDNN-FGGMLPEAVGNLSTRLRKLIVGNNQL-FGNIPSGL-RNLVNLELLHLGGNQFTGQ--IPGSIGDL 359 (715)
Q Consensus 285 ~~~~L~~L~ls~n~-i~~~~~~~~~~~~~~L~~L~l~~n~i-~~~~~~~~-~~l~~L~~L~L~~n~i~~~--~~~~~~~l 359 (715)
.+..|+.|+.+++. +++..-..++.-..+|+.+-++.|+- ++.....+ .+++.|+.+++..+..... ....-.++
T Consensus 292 ~c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C 371 (483)
T KOG4341|consen 292 GCHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNC 371 (483)
T ss_pred hhhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCC
Confidence 45666777766653 33333333444444566676666652 22221222 3456666666666644311 11222355
Q ss_pred CCccEEEccCCcccccC-----CccccCCCCCCeEeccCCcccc-cCCcccccCCCCCEEeCcCcc
Q 046340 360 HKLQWLMLPANEFWGEI-----PSSIGNLTSLAILAFDENMLEG-SIPSSLGKCQNLILLDLSNNN 419 (715)
Q Consensus 360 ~~L~~L~L~~n~i~~~~-----~~~~~~l~~L~~L~l~~n~i~~-~~~~~~~~~~~L~~L~L~~n~ 419 (715)
+.|+.|.++++...... ...-+.+..|+.+.+++++... ..-+.+..+++|+.+++-.++
T Consensus 372 ~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q 437 (483)
T KOG4341|consen 372 PRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQ 437 (483)
T ss_pred chhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechh
Confidence 66666666665432111 1122344556666666665432 222334455566665555543
No 371
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=97.51 E-value=0.00023 Score=71.69 Aligned_cols=65 Identities=25% Similarity=0.323 Sum_probs=52.1
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|..-+.||+|++|.||+|....++. .+|+|++........+.+.+|+.++++++||||+++++++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~--~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~ 85 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGR--QVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSY 85 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCC--EEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEE
Confidence 3334789999999999999654433 8999998754444456688999999999999999999874
No 372
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=97.51 E-value=0.0002 Score=73.31 Aligned_cols=61 Identities=23% Similarity=0.353 Sum_probs=45.9
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhc-CCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRS-VRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~-~~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|+..+++. .||||.++... ....+.+..|..++.. .+||||+++++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~ 65 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNE--FFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTF 65 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCC--EEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEE
Confidence 368999999999999866533 89999997432 2223456677777765 4899999999864
No 373
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.51 E-value=0.00016 Score=76.54 Aligned_cols=69 Identities=30% Similarity=0.461 Sum_probs=56.0
Q ss_pred HhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcC-CCCCcceEEEE
Q 046340 643 KATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSV-RHRNLVKIITS 713 (715)
Q Consensus 643 ~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~-~h~niv~l~g~ 713 (715)
....+|....++|+|+||+|+.+.+++++. .+|||.++... ....+....|.+|+.-. +||.+++++++
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e--~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~ 437 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNE--YYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSC 437 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCc--EEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccc
Confidence 345678888999999999999999987765 99999998653 34456677888887655 69999999875
No 374
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.50 E-value=0.00033 Score=71.42 Aligned_cols=57 Identities=14% Similarity=0.080 Sum_probs=31.9
Q ss_pred ccCCCCCCEEEcCCceeeeecCccccCCCCccEEEccCCcccccCCccccCCCCCCeEeccCC
Q 046340 332 LRNLVNLELLHLGGNQFTGQIPGSIGDLHKLQWLMLPANEFWGEIPSSIGNLTSLAILAFDEN 394 (715)
Q Consensus 332 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n 394 (715)
+..+.+++.|++++|.++.. |. -.++|++|.++++.--...|..+ .++|+.|++++|
T Consensus 48 ~~~~~~l~~L~Is~c~L~sL-P~---LP~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~C 104 (426)
T PRK15386 48 IEEARASGRLYIKDCDIESL-PV---LPNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHC 104 (426)
T ss_pred HHHhcCCCEEEeCCCCCccc-CC---CCCCCcEEEccCCCCcccCCchh--hhhhhheEccCc
Confidence 33457788888888876633 31 22357777776643323334333 245666666665
No 375
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=97.49 E-value=0.00025 Score=70.76 Aligned_cols=67 Identities=22% Similarity=0.500 Sum_probs=50.8
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC----------CcchHHHHHHHHHHhc-CCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH----------RGASKSFMAQCQALRS-VRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~----------~~~~~~~~~e~~~l~~-~~h~niv~l~g~~ 714 (715)
+|+..+.||+|+||.||+|+...+ .+..+|+|.+.... .....++.+|+.++.+ ++||||+++++++
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 78 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNN-GQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTF 78 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCC-CCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeE
Confidence 366778899999999999998662 23489999985321 1122457788988875 7999999999986
No 376
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=97.49 E-value=9.3e-05 Score=79.30 Aligned_cols=72 Identities=18% Similarity=0.423 Sum_probs=49.3
Q ss_pred HhhcCCccccccCcCCCceEEEEEECC--------------CCceeEEEEEEeeccCCcchHH--------------HHH
Q 046340 643 KATDGFSLENLIGAGSFGSVYKGILNH--------------DDHETLVAVKVLNLQHRGASKS--------------FMA 694 (715)
Q Consensus 643 ~~~~~f~~~~~lg~g~~g~vy~~~~~~--------------~~~~~~~avk~l~~~~~~~~~~--------------~~~ 694 (715)
...++|...++||+|+||.||+|.... ...+..||||++........++ +..
T Consensus 142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence 347789999999999999999997521 1123479999996433222223 345
Q ss_pred HHHHHhcCCCCCc-----ceEEEEe
Q 046340 695 QCQALRSVRHRNL-----VKIITSC 714 (715)
Q Consensus 695 e~~~l~~~~h~ni-----v~l~g~~ 714 (715)
|+.++.+++|.++ ++++|||
T Consensus 222 E~~~l~~l~~~~l~~~~~~~~lg~~ 246 (507)
T PLN03224 222 EAYMCAKIKRNPIAAASCAEYLGYF 246 (507)
T ss_pred HHHHHHHhhcccchhhhhhhhhhhc
Confidence 7777777877654 6777775
No 377
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.49 E-value=0.00028 Score=71.90 Aligned_cols=52 Identities=19% Similarity=0.195 Sum_probs=28.9
Q ss_pred cCcEEEccccceeecCCccccCCCCCCEEEcCCceeeeecCccccCCCCccEEEccCC
Q 046340 313 RLRKLIVGNNQLFGNIPSGLRNLVNLELLHLGGNQFTGQIPGSIGDLHKLQWLMLPAN 370 (715)
Q Consensus 313 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 370 (715)
.++.|++++|.++.. |. + -++|+.|.++++.--...|+.+ .++|++|++++|
T Consensus 53 ~l~~L~Is~c~L~sL-P~-L--P~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~C 104 (426)
T PRK15386 53 ASGRLYIKDCDIESL-PV-L--PNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHC 104 (426)
T ss_pred CCCEEEeCCCCCccc-CC-C--CCCCcEEEccCCCCcccCCchh--hhhhhheEccCc
Confidence 467777777766532 31 1 2357777776643322444433 246777777766
No 378
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=97.48 E-value=0.00022 Score=73.28 Aligned_cols=61 Identities=33% Similarity=0.473 Sum_probs=45.2
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHH-HHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQ-ALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~-~l~~~~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|+....+ ..||+|.+.... ......+.+|.. +++.++|||||++++++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~ 65 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDG--SFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSF 65 (321)
T ss_pred CeeeeCCCEEEEEEEECCCC--CEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEE
Confidence 36899999999999976543 389999996432 122334555554 57889999999998865
No 379
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=97.48 E-value=0.00021 Score=73.28 Aligned_cols=61 Identities=28% Similarity=0.377 Sum_probs=47.5
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|+...++. .||||.+.... ....+.+.+|+.++... +|||||++++++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~ 65 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGR--LYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCF 65 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCC--EEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEE
Confidence 368999999999999765433 89999997432 22345677899998876 799999999874
No 380
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=97.48 E-value=3.7e-05 Score=69.80 Aligned_cols=64 Identities=20% Similarity=0.482 Sum_probs=52.6
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCC-CCCcceEEEE
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVR-HRNLVKIITS 713 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~-h~niv~l~g~ 713 (715)
..+|+..+.+|+|.|++||.|.--..+. .+.||++++.++ +...||++|+..+. ||||++++..
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~e--K~ViKiLKPVkk---kKIkREikIL~nL~gg~NIi~L~Di 101 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNE--KCVIKILKPVKK---KKIKREIKILQNLRGGPNIIKLLDI 101 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCc--eEEEeeechHHH---HHHHHHHHHHHhccCCCCeeehhhh
Confidence 4567778999999999999998544434 789999987653 56889999999996 9999998754
No 381
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=97.47 E-value=0.00025 Score=73.00 Aligned_cols=61 Identities=38% Similarity=0.455 Sum_probs=45.0
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHH-HHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQ-ALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~-~l~~~~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|+...+ +..||+|++.... ......+.+|.. +++.++|||||++++++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~ 65 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLD--GKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSF 65 (325)
T ss_pred CceeeCCCeEEEEEEECCC--CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEE
Confidence 3689999999999997544 3489999996431 122345566655 46779999999998875
No 382
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=97.47 E-value=0.00011 Score=69.71 Aligned_cols=68 Identities=28% Similarity=0.328 Sum_probs=56.4
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..+|+....+|-|+||.|...+.+.+ +..+|+|+++... .++.+....|..++..+.||.+|+|++.+
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~--g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~ 113 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHS--GNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTF 113 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccC--CceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEee
Confidence 45677789999999999999998765 3489999997543 34556778999999999999999999865
No 383
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=97.47 E-value=0.00013 Score=75.19 Aligned_cols=65 Identities=23% Similarity=0.406 Sum_probs=52.7
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|...+.||+|+||.||+|+.... +..||+|++.... ....+.+.+|+++++.++||||++++|++
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~--~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 68 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRT--GRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDIL 68 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCC--CcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhh
Confidence 56678899999999999997554 3489999996532 23346789999999999999999998864
No 384
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=97.47 E-value=0.00025 Score=72.94 Aligned_cols=61 Identities=36% Similarity=0.483 Sum_probs=45.0
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHH-HHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQ-ALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~-~l~~~~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|+...++ ..||+|.+.... ......+.+|.. +++.++|||||++++++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~ 65 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADG--KFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSF 65 (323)
T ss_pred CeeeeCCCeEEEEEEECCCC--CEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEE
Confidence 36899999999999976543 489999996432 122344556655 45789999999998864
No 385
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=97.46 E-value=0.00025 Score=72.92 Aligned_cols=66 Identities=23% Similarity=0.304 Sum_probs=50.4
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCC-CcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHR-NLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~-niv~l~g~~ 714 (715)
+|...+.||+|+||.||+|+..+++ ..||||.+.... ....+.+..|+.+++.++|+ +|+++++++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~--~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~ 70 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTD--ELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF 70 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCC--CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEE
Confidence 4667789999999999999976553 389999997432 22345688999999999765 577777664
No 386
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=97.46 E-value=0.00031 Score=69.38 Aligned_cols=66 Identities=26% Similarity=0.443 Sum_probs=53.3
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC--cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR--GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~--~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||++....++ ..||+|++..... ...+++.+|++++++++|||+++++++.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~--~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~ 68 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDG--KLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESF 68 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCC--cEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEE
Confidence 3566788999999999999976443 3899999975433 3345788999999999999999998764
No 387
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=97.46 E-value=0.00024 Score=73.32 Aligned_cols=67 Identities=21% Similarity=0.304 Sum_probs=51.7
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
|...+.||+|+||.||+++..+...+..||+|+++... ....+.+.+|+.++.++ +|||||++++++
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 71 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMD 71 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeee
Confidence 56678899999999999997654223489999986421 22245688999999999 599999999853
No 388
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=97.46 E-value=0.00011 Score=74.42 Aligned_cols=61 Identities=28% Similarity=0.390 Sum_probs=50.0
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..||+|+||.||++....++ ..||||.+........+.+.+|+.++++++||||+++++++
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~ 88 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTG--KQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSY 88 (292)
T ss_pred hcccCCCCeEEEEEEECCCC--CEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHhe
Confidence 56999999999999865443 38999998754444456789999999999999999988764
No 389
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=97.45 E-value=0.00027 Score=79.82 Aligned_cols=68 Identities=26% Similarity=0.357 Sum_probs=54.4
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC---cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR---GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~---~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..+|...+.||+|+||.||+|.....+ ..||||.++.... .....+.+|+.+++.++|||||++++++
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~--~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~ 73 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNS--KLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSL 73 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCC--cEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEE
Confidence 356778899999999999999976443 4899999964322 2235688999999999999999998764
No 390
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=97.44 E-value=0.00032 Score=70.51 Aligned_cols=64 Identities=23% Similarity=0.377 Sum_probs=48.9
Q ss_pred ccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCC-CCCcceEEEEe
Q 046340 649 SLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVR-HRNLVKIITSC 714 (715)
Q Consensus 649 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~-h~niv~l~g~~ 714 (715)
...+.+|+|+||.||+|+....+ ..||+|++..... .......+|+.++.++. |||+++++|++
T Consensus 2 ~~~~~lg~g~~~~v~~~~~~~~~--~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 67 (282)
T cd07831 2 KILGKIGEGTFSEVLKAQSRKTG--KYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVL 67 (282)
T ss_pred ceEeeccccccceEEEEEEcCCC--cEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEE
Confidence 44578999999999999975443 3899999864322 12234568999999985 99999999986
No 391
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=97.43 E-value=0.00031 Score=70.41 Aligned_cols=59 Identities=22% Similarity=0.348 Sum_probs=47.0
Q ss_pred cCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 654 IGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 654 lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
||+|+||.||++..... +..||+|.+.... ......+.+|++++++++||||+++++++
T Consensus 1 lg~g~~g~vy~~~~~~~--~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 62 (277)
T cd05577 1 LGKGGFGEVCACQVKAT--GKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAF 62 (277)
T ss_pred CCCCCceeEEEEEEcCC--CcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEE
Confidence 69999999999987654 3489999997532 12234678999999999999999998764
No 392
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=97.43 E-value=0.00023 Score=72.17 Aligned_cols=68 Identities=19% Similarity=0.243 Sum_probs=53.0
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCC-CCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVR-HRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~-h~niv~l~g~~ 714 (715)
.++|...+.||+|+||.||+|.....+ ..||||+++.... ....++.+|+.++.+.. ||||++++|+|
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~--~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~ 83 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTG--HVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYF 83 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCC--eEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheee
Confidence 456777799999999999999986543 4899999975432 22346778888777774 99999999986
No 393
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=97.43 E-value=0.0003 Score=67.80 Aligned_cols=65 Identities=31% Similarity=0.540 Sum_probs=53.8
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCc-chHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRG-ASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~-~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|...+.||+|++|.||+|+..+++. .+|+|.......+ ..+.+.+|++.+++++|+|++++++++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~--~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~ 66 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGE--LVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVF 66 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCc--EEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeee
Confidence 3455789999999999999876433 8999999765443 467899999999999999999999875
No 394
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.42 E-value=8.9e-05 Score=75.25 Aligned_cols=66 Identities=23% Similarity=0.367 Sum_probs=52.9
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcc--hHHHHHHHHHHhcCCCCCcceEEEE
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGA--SKSFMAQCQALRSVRHRNLVKIITS 713 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~--~~~~~~e~~~l~~~~h~niv~l~g~ 713 (715)
+-|..++.||+|-|+.|-.+++-=+ |..||||.++..+... ......|++.|.-++|||||+||.+
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFT--GekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEV 85 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFT--GEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEV 85 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcc--cceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeeh
Confidence 4567778999999999998875433 3489999998765433 2457899999999999999999875
No 395
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=97.42 E-value=0.00033 Score=69.27 Aligned_cols=66 Identities=27% Similarity=0.402 Sum_probs=52.7
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||+++...++ ..||+|.+.... ....+.+.+|++++++++|||++++++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 68 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDG--KQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESW 68 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCC--cEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeee
Confidence 3667789999999999999976543 389999996432 22345688999999999999999998763
No 396
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=97.39 E-value=0.00033 Score=71.94 Aligned_cols=66 Identities=23% Similarity=0.318 Sum_probs=50.4
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||+|+..+++ ..||||.+.... ....+.+..|..++..+ +|++|+++++++
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~ 70 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTD--ELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCF 70 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCC--CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEE
Confidence 4667789999999999999976553 489999997532 12234567788888877 688999888875
No 397
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=97.39 E-value=4.8e-05 Score=70.74 Aligned_cols=61 Identities=25% Similarity=0.347 Sum_probs=48.8
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cchHHHHHHHHHHhc-CCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GASKSFMAQCQALRS-VRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~-~~h~niv~l~g~~ 714 (715)
..||.|.||+|+|-.++.. ++..|||+++.... +..+.+..|.++..+ -+-||||+++|++
T Consensus 70 g~iG~G~fG~V~KM~hk~s--g~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~ 132 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPS--GKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGAL 132 (361)
T ss_pred HHhcCCcchhhhhhhcCcc--CcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhh
Confidence 6799999999999987655 44899999986543 334578899887655 4899999999975
No 398
>PHA03210 serine/threonine kinase US3; Provisional
Probab=97.39 E-value=0.00011 Score=80.14 Aligned_cols=69 Identities=23% Similarity=0.281 Sum_probs=47.6
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEee--------------c---cCCcchHHHHHHHHHHhcCCCCCc
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLN--------------L---QHRGASKSFMAQCQALRSVRHRNL 707 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~--------------~---~~~~~~~~~~~e~~~l~~~~h~ni 707 (715)
..+|...+.||+|+||.||+|.+.... +..++.|.+. . ........+.+|+.++++++||||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRAST-EEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccc-hhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 467888899999999999998865331 1122222110 0 001123468899999999999999
Q ss_pred ceEEEEe
Q 046340 708 VKIITSC 714 (715)
Q Consensus 708 v~l~g~~ 714 (715)
|++++++
T Consensus 226 v~l~~~~ 232 (501)
T PHA03210 226 LKIEEIL 232 (501)
T ss_pred CcEeEEE
Confidence 9999875
No 399
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=97.38 E-value=0.00034 Score=71.97 Aligned_cols=61 Identities=20% Similarity=0.263 Sum_probs=48.5
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccCC---cchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR---GASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~---~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|+...++. .||+|.++.... ...+.+.+|+.++.++ +||||+++++++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~ 65 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQ--IYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCF 65 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCC--EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEE
Confidence 468999999999999866544 899999975421 2234578999999888 799999999875
No 400
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=97.38 E-value=0.00019 Score=72.16 Aligned_cols=65 Identities=25% Similarity=0.513 Sum_probs=52.1
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|+..+.||+|+||.||+|+....+. .||+|.+.... ....+.+.+|+.++++++|+|+++++|++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~--~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~ 67 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGE--IVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVI 67 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCc--EEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhh
Confidence 3445789999999999999765434 89999997543 22345788999999999999999998865
No 401
>PTZ00284 protein kinase; Provisional
Probab=97.38 E-value=0.00019 Score=77.83 Aligned_cols=73 Identities=23% Similarity=0.333 Sum_probs=53.0
Q ss_pred HHHHHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCC------CcceEEE
Q 046340 639 QNLIKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHR------NLVKIIT 712 (715)
Q Consensus 639 ~~~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~------niv~l~g 712 (715)
+++.....+|...+.||+|+||.||+|+....+ ..||||+++... ...+++.+|+.++.+++|. +++++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~--~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~ 198 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRK--EYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQR 198 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCC--eEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEE
Confidence 344455778999999999999999999976543 489999996432 2234567788887776554 4777776
Q ss_pred Ee
Q 046340 713 SC 714 (715)
Q Consensus 713 ~~ 714 (715)
|+
T Consensus 199 ~~ 200 (467)
T PTZ00284 199 YF 200 (467)
T ss_pred EE
Confidence 64
No 402
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=97.37 E-value=0.0004 Score=69.99 Aligned_cols=65 Identities=26% Similarity=0.493 Sum_probs=49.2
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC--cchHHHHHHHHHHhcC---CCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR--GASKSFMAQCQALRSV---RHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~--~~~~~~~~e~~~l~~~---~h~niv~l~g~~ 714 (715)
|...+.||+|+||.||+|+...++ ..||+|++..... .....+.+|+.++.++ +|||+++++|++
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~ 70 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTG--RFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVC 70 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCC--CEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEE
Confidence 445688999999999999986543 3899999964322 1234567788877655 699999999986
No 403
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=97.36 E-value=0.00016 Score=72.54 Aligned_cols=66 Identities=21% Similarity=0.374 Sum_probs=52.6
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCC-CCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVR-HRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~-h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||+|+...++. .||+|...... ....+.+.+|+.++.+++ ||||+++++++
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~--~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~ 71 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNK--EYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTF 71 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCC--EEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHh
Confidence 57777899999999999999765433 89999986432 222356889999999998 99999987754
No 404
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=97.36 E-value=0.00046 Score=68.51 Aligned_cols=59 Identities=22% Similarity=0.396 Sum_probs=48.1
Q ss_pred cCcCCCceEEEEEECCCCceeEEEEEEeeccCC---cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 654 IGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR---GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 654 lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~---~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
||.|+||.||+|+....+ ..+|+|.+..... ...+.+.+|+.++++++||||+++++++
T Consensus 1 lg~g~~~~v~~~~~~~~~--~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 62 (262)
T cd05572 1 LGVGGFGRVELVKVKSKN--RTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTF 62 (262)
T ss_pred CCCCCceEEEEEEECCCC--cEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeE
Confidence 699999999999976543 3899999964322 2345789999999999999999999875
No 405
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=97.36 E-value=0.00024 Score=70.14 Aligned_cols=66 Identities=27% Similarity=0.426 Sum_probs=52.2
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+|+..+.||+|+||.||+++...++ ..+|+|.+.... .....++.+|++++++++||||+++++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~--~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 68 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDN--QFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAF 68 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCC--CEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhh
Confidence 3666788999999999999875443 489999997543 22345688999999999999999987653
No 406
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=97.35 E-value=7e-06 Score=75.11 Aligned_cols=65 Identities=18% Similarity=0.383 Sum_probs=50.9
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEEE
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKIIT 712 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~g 712 (715)
..|+..++||+|.|+.||++....+ +..+|+|.+.... ..+-++..+|++|-+.++|||||++..
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~t--g~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ 77 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTT--GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 77 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccc--hHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhh
Confidence 4566778999999999999985443 4478988885332 224567889999999999999999864
No 407
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.34 E-value=5e-05 Score=84.17 Aligned_cols=134 Identities=23% Similarity=0.282 Sum_probs=73.2
Q ss_pred CCCCcEEEccCCccceecCcchhcCCCCCCEEEeeCccccccCCccccCCCCCCEEEeecccceec--cccccCcCCCcE
Q 046340 183 LSSLTHFYFPFNQLQGSLPSDLGFTLPNLEVLNVGGNQFTGPIPASISNASNLMRLTIAKNGFSGR--VPSLENLYKLQW 260 (715)
Q Consensus 183 l~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~L~~n~~~~~--~~~~~~l~~L~~ 260 (715)
+|+|++|.+.+-.+...--..+...+|+|..||+++..++.. ..++.+++|+.|.+.+-.+... ...+-.+++|+.
T Consensus 147 LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~L~mrnLe~e~~~~l~~LF~L~~L~v 224 (699)
T KOG3665|consen 147 LPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQVLSMRNLEFESYQDLIDLFNLKKLRV 224 (699)
T ss_pred CcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHHHhccCCCCCchhhHHHHhcccCCCe
Confidence 566666666554442111112333567777777777776633 4566777777777766666532 223566777777
Q ss_pred EEcccCCCCCCCCCCccccccccccCCCCCEEEccCCcccccCChhHhhccccCcEEEc
Q 046340 261 VSISHNHLGNYGEKDNLEFVNSLVNASRLELLEISDNNFGGMLPEAVGNLSTRLRKLIV 319 (715)
Q Consensus 261 L~l~~n~l~~~~~~~~~~~~~~l~~~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l 319 (715)
||+|........ ..-..+++.-..+|+|+.||.|+..+.+..-+.+....++|+.+.+
T Consensus 225 LDIS~~~~~~~~-~ii~qYlec~~~LpeLrfLDcSgTdi~~~~le~ll~sH~~L~~i~~ 282 (699)
T KOG3665|consen 225 LDISRDKNNDDT-KIIEQYLECGMVLPELRFLDCSGTDINEEILEELLNSHPNLQQIAA 282 (699)
T ss_pred eeccccccccch-HHHHHHHHhcccCccccEEecCCcchhHHHHHHHHHhCccHhhhhh
Confidence 777766544322 1111223333446777777777777665544444433333444443
No 408
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=97.34 E-value=0.0004 Score=71.68 Aligned_cols=68 Identities=24% Similarity=0.313 Sum_probs=51.3
Q ss_pred CCccccccCcCCCceEEEEEECC-CCceeEEEEEEeeccC----CcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNH-DDHETLVAVKVLNLQH----RGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~-~~~~~~~avk~l~~~~----~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
+|...+.||+|+||.||+++... ...+..||+|.+.... ....+.+.+|+.++.++ +||+|+++++++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~ 74 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAF 74 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEE
Confidence 46677899999999999988532 2234589999996432 12234678999999999 599999998764
No 409
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=97.33 E-value=0.00018 Score=71.36 Aligned_cols=66 Identities=27% Similarity=0.365 Sum_probs=53.4
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEE
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITS 713 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~ 713 (715)
..|...+.||.|..|.||.+++.+.. ..+|+|.+.... ++.....+.|-+|++.++||.+++||+.
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~--~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~ 145 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTN--CLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYAS 145 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCC--ceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhe
Confidence 34556688999999999999998764 489999997543 3334567889999999999999999875
No 410
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=97.33 E-value=0.00051 Score=70.76 Aligned_cols=61 Identities=26% Similarity=0.306 Sum_probs=47.1
Q ss_pred cccCcC--CCceEEEEEECCCCceeEEEEEEeeccCCc--chHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 652 NLIGAG--SFGSVYKGILNHDDHETLVAVKVLNLQHRG--ASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g--~~g~vy~~~~~~~~~~~~~avk~l~~~~~~--~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..||+| +||.||+++.... +..||+|........ ..+.+.+|+.+++.++|||||++++++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~ 68 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPT--GTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVF 68 (328)
T ss_pred HHhCCcccCceeEEEEEEcCC--CcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeE
Confidence 356666 9999999986544 348999998754322 235688999999999999999999986
No 411
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=97.32 E-value=0.00043 Score=70.85 Aligned_cols=61 Identities=23% Similarity=0.294 Sum_probs=46.7
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhc-CCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRS-VRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~-~~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|+....+ ..||+|.++... ....+.+..|+.++.. .+||||+++++++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~--~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~ 65 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKG--EYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTF 65 (316)
T ss_pred CeeeeCCCeEEEEEEECCCC--CEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEE
Confidence 46899999999999976543 489999997532 1223456778888875 4999999999874
No 412
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=97.32 E-value=0.00046 Score=70.96 Aligned_cols=61 Identities=33% Similarity=0.479 Sum_probs=44.6
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHH-HHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQ-ALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~-~l~~~~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|+...++. .||+|.+.... ......+.+|.. +++.++|||||++++++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~ 65 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEK--FYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF 65 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCC--EEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEE
Confidence 368999999999999765533 89999997432 122234455544 56789999999998875
No 413
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=97.29 E-value=0.00046 Score=70.92 Aligned_cols=66 Identities=23% Similarity=0.300 Sum_probs=49.2
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCC-CCCcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVR-HRNLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~-h~niv~l~g~~ 714 (715)
+|+..+.||+|+||.||+|+...++ ..||+|.+.... ....+.+..|+.+++.+. |++|+++++++
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~ 70 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTD--ELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCF 70 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCC--CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEE
Confidence 3666789999999999999976543 489999997432 222346788999998885 56777777653
No 414
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=97.29 E-value=0.00032 Score=70.47 Aligned_cols=64 Identities=27% Similarity=0.498 Sum_probs=51.1
Q ss_pred ccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC--cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 649 SLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR--GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 649 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~--~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
...+.||+|++|.||+|+...++ ..+|+|++..... .....+.+|+.++++++|+||+++++++
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~--~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 67 (283)
T cd05118 2 QKLGKIGEGTYGVVYKARDKLTG--EIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVF 67 (283)
T ss_pred ccceeeecCCCceEEEEEcCCCC--cEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhh
Confidence 44578999999999999976443 4899999865432 2346788999999999999999998765
No 415
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=97.27 E-value=0.00025 Score=71.33 Aligned_cols=65 Identities=26% Similarity=0.418 Sum_probs=50.0
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cchHHHHHHHHHHhcCC-CCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GASKSFMAQCQALRSVR-HRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~~~-h~niv~l~g~~ 714 (715)
|...+.||+|+||.||+|+..+.+. .||+|++..... .......+|+..+++++ |||+++++|++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~--~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 67 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGE--LVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVF 67 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCc--EEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHh
Confidence 3456789999999999999865433 899999864322 12234567999999999 99999998765
No 416
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=97.26 E-value=0.00021 Score=74.16 Aligned_cols=67 Identities=19% Similarity=0.336 Sum_probs=53.3
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeecc--CCcchHHHHHHHHHHhcCCCCCcceEEEE
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQ--HRGASKSFMAQCQALRSVRHRNLVKIITS 713 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~--~~~~~~~~~~e~~~l~~~~h~niv~l~g~ 713 (715)
.++|...+.||+|+||.||+|+...++. .||||++... .....+.+.+|+.++++++|||+++++++
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 82 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGR--KVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDV 82 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCc--EEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHH
Confidence 5568888999999999999999865544 8999998643 12233567889999999999999987654
No 417
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=97.23 E-value=0.00034 Score=69.44 Aligned_cols=59 Identities=19% Similarity=0.316 Sum_probs=47.2
Q ss_pred cCcCCCceEEEEEECCCCceeEEEEEEeeccCC---cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 654 IGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR---GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 654 lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~---~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
||+|+||.||+++.... +..+|+|.+..... ...+.+.+|+.++++++||||+++++++
T Consensus 1 lg~g~~~~vy~~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~ 62 (265)
T cd05579 1 ISKGAYGRVFLAKKKST--GDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSF 62 (265)
T ss_pred CCCCCceEEEEEEECCC--CCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhe
Confidence 68999999999997654 34899999964432 3345788999999999999999987653
No 418
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=97.23 E-value=0.00027 Score=70.11 Aligned_cols=65 Identities=26% Similarity=0.302 Sum_probs=47.6
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC-----CcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-----RGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-----~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
|...+.||+|+||.||+++....+. .+++|.++... .....++.+|+.++++++||||+++++++
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 71 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVA--EERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASF 71 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCC--cceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 5667889999999999998654422 45566654321 22334677899999999999999988754
No 419
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=97.22 E-value=7e-06 Score=75.41 Aligned_cols=67 Identities=25% Similarity=0.478 Sum_probs=52.4
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeecc--CCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQ--HRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~--~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+.|.....||+|.||+||+++..++ ++.||+|+.-.. +........+|++++..++|+|+|+++..|
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~--~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic 85 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNT--GKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEIC 85 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCc--cchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHH
Confidence 4455668899999999999996654 447998887432 233356789999999999999999987765
No 420
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=97.20 E-value=0.00055 Score=74.44 Aligned_cols=75 Identities=23% Similarity=0.433 Sum_probs=59.6
Q ss_pred hHHHHHHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 637 SYQNLIKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 637 ~~~~~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
.++.+...+..|++..+||.|.+|.||+++-...++ .+|+|++..... ..++...|.++++.. +|||+++++|+.
T Consensus 10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~--~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~ 85 (953)
T KOG0587|consen 10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQ--LAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAF 85 (953)
T ss_pred chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCc--eeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEE
Confidence 344455667778888999999999999999665544 789999976543 346688888998876 899999999985
No 421
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=97.16 E-value=0.00043 Score=73.03 Aligned_cols=65 Identities=22% Similarity=0.412 Sum_probs=51.3
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCC-CC-----CcceEEEEe
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVR-HR-----NLVKIITSC 714 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~-h~-----niv~l~g~~ 714 (715)
.|...+.||+|.||.|.||.-. +++..||||+++... ....+-..|+.++..++ |- |+|+++.|-
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~--~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F 257 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDH--KTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF 257 (586)
T ss_pred EEEEEEEecccccceeEEEEec--CCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc
Confidence 6778899999999999999844 345599999997543 23456678999999886 43 899998873
No 422
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.15 E-value=0.00029 Score=72.91 Aligned_cols=67 Identities=22% Similarity=0.379 Sum_probs=52.9
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..|....+||+|+-|.||-+.-... +..||||++........+-...|+.+|+..+|+|||+++..+
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~--~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sy 339 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKIST--KQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSY 339 (550)
T ss_pred hhhcchhhhccccccceeeeeeccC--CceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHh
Confidence 3455557899999999999985544 348999999866544455678999999999999999987543
No 423
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=97.15 E-value=0.00093 Score=67.47 Aligned_cols=67 Identities=24% Similarity=0.339 Sum_probs=50.8
Q ss_pred CccccccCcCCCceEEEEEECCC-CceeEEEEEEeeccC----CcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHD-DHETLVAVKVLNLQH----RGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~-~~~~~~avk~l~~~~----~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
|+..+.||+|+||.||.++...+ ..+..||+|++.... ....+.+.+|+.++.++ +|+||+++++++
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~ 74 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF 74 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEe
Confidence 56678899999999999986321 134589999997432 12235688999999999 699999998764
No 424
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=97.13 E-value=0.00026 Score=73.15 Aligned_cols=69 Identities=19% Similarity=0.345 Sum_probs=53.3
Q ss_pred HhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--------CcchHHHHHHHHHHhcCC---CCCcceEE
Q 046340 643 KATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--------RGASKSFMAQCQALRSVR---HRNLVKII 711 (715)
Q Consensus 643 ~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--------~~~~~~~~~e~~~l~~~~---h~niv~l~ 711 (715)
....+|.....+|+|+||.|+.|.++.... .|.||++.+.+ .......-.||.||+.++ |+||+|++
T Consensus 558 ~k~s~yttlq~lG~GAyGkV~lai~K~n~~--eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlL 635 (772)
T KOG1152|consen 558 KKFSDYTTLQPLGEGAYGKVNLAIHKENNY--EVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLL 635 (772)
T ss_pred cccccceeeeeccccccceEEEeeecccce--EEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhh
Confidence 334567788999999999999999976643 79999996432 111234567999999997 99999998
Q ss_pred EE
Q 046340 712 TS 713 (715)
Q Consensus 712 g~ 713 (715)
.+
T Consensus 636 df 637 (772)
T KOG1152|consen 636 DF 637 (772)
T ss_pred he
Confidence 65
No 425
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.12 E-value=0.00016 Score=67.59 Aligned_cols=37 Identities=22% Similarity=0.247 Sum_probs=14.8
Q ss_pred ccCCCCCCEEeCCCCCCCccCChhhcCCCCCcEEecCCC
Q 046340 36 IGNLSFLRVLDLKNNSFRDEIPQEIGYLFRLQILALHNN 74 (715)
Q Consensus 36 ~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n 74 (715)
.-.+..|+.|++.+..++.. ..|..+++|++|.++.|
T Consensus 39 ~d~~~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn 75 (260)
T KOG2739|consen 39 TDEFVELELLSVINVGLTTL--TNFPKLPKLKKLELSDN 75 (260)
T ss_pred cccccchhhhhhhccceeec--ccCCCcchhhhhcccCC
Confidence 33334444444444444322 12333444444444444
No 426
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=97.12 E-value=0.00018 Score=75.26 Aligned_cols=63 Identities=21% Similarity=0.485 Sum_probs=46.8
Q ss_pred cccccCcCCCceEEEEEECCCCceeEEEEEEe---ecc-CCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 650 LENLIGAGSFGSVYKGILNHDDHETLVAVKVL---NLQ-HRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 650 ~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l---~~~-~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+.+||+|.|-+||||. +..+|..||=-.+ +.. +....+.|..|+.++..++|||||+++.++
T Consensus 44 ~~evLGrGafKtVYka~--De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW 110 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAF--DEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSW 110 (632)
T ss_pred hhhhcccccceeeeecc--ccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeehe
Confidence 35789999999999999 4445556662222 211 122336799999999999999999999875
No 427
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=97.08 E-value=0.00029 Score=72.36 Aligned_cols=69 Identities=23% Similarity=0.345 Sum_probs=54.8
Q ss_pred HHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeecc---CCcchHHHHHHHHHHhcC-CCCCcceEEE
Q 046340 642 IKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQ---HRGASKSFMAQCQALRSV-RHRNLVKIIT 712 (715)
Q Consensus 642 ~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~---~~~~~~~~~~e~~~l~~~-~h~niv~l~g 712 (715)
++...+|...++||+|+|++||+|+-.+. +..||||++... +.+..+-+.+|-.+|.++ .||.||+|+.
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t--~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~ 141 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKAT--GKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYF 141 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCC--CceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEE
Confidence 45567888889999999999999996554 459999999643 122234567899999999 9999999975
No 428
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.07 E-value=0.00019 Score=67.13 Aligned_cols=110 Identities=15% Similarity=0.154 Sum_probs=77.8
Q ss_pred CChhhcCCCCCcEEecCCCcCcccCCccccCCCCCCEEEccCC--cCccCccccccCCCCCCEEEeecccccc-ccCccc
Q 046340 56 IPQEIGYLFRLQILALHNNTFGGQIPDNISHCVNLESLGLGVN--ELVGKVPGKLGSLSKLWILSVHYNSLSG-EIPSSF 132 (715)
Q Consensus 56 ~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n--~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~ 132 (715)
+......+..|+.|++.+..++. ...|..+++|+.|.++.| ++++-.+.....+++|++|++++|++.. .....+
T Consensus 35 ~~gl~d~~~~le~ls~~n~gltt--~~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl 112 (260)
T KOG2739|consen 35 LGGLTDEFVELELLSVINVGLTT--LTNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPL 112 (260)
T ss_pred cccccccccchhhhhhhccceee--cccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchh
Confidence 44455667788888888877763 234667889999999999 6665555556677999999999999872 112235
Q ss_pred cCCCCCCEEEcccCcceecCC---ccccCCCCCCEEEe
Q 046340 133 GNLSSLEFLSAAANQFVGQFP---ETLSELKMMRYISF 167 (715)
Q Consensus 133 ~~l~~L~~L~l~~n~~~~~~~---~~l~~l~~L~~L~L 167 (715)
..+.+|..|++.+|..+.... ..|.-+++|++|+-
T Consensus 113 ~~l~nL~~Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~ 150 (260)
T KOG2739|consen 113 KELENLKSLDLFNCSVTNLDDYREKVFLLLPSLKYLDG 150 (260)
T ss_pred hhhcchhhhhcccCCccccccHHHHHHHHhhhhccccc
Confidence 667788899999988765322 13556777777654
No 429
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=97.03 E-value=0.00071 Score=66.51 Aligned_cols=59 Identities=25% Similarity=0.331 Sum_probs=47.1
Q ss_pred cCcCCCceEEEEEECCCCceeEEEEEEeeccCC---cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 654 IGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR---GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 654 lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~---~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
||+|+||.||+++.... +..+|+|.+..... ...+.+..|+.++++++||||+++++++
T Consensus 1 lg~G~~~~v~~~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 62 (250)
T cd05123 1 LGKGSFGKVLLVRKKDT--GKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAF 62 (250)
T ss_pred CCCCCceEEEEEEECCC--CcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHe
Confidence 69999999999997654 34899999975432 2345789999999999999999887653
No 430
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=97.02 E-value=0.00016 Score=71.98 Aligned_cols=64 Identities=27% Similarity=0.391 Sum_probs=48.0
Q ss_pred ccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC-Ccc------hHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 649 SLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-RGA------SKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 649 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-~~~------~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
-..+.+|+|+|++||+++--.. ...||||+-...+ +.+ .+...+|..|-..++||.||++|.|.
T Consensus 466 LlLhLLGrGGFSEVyKAFDl~E--qRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyf 536 (775)
T KOG1151|consen 466 LLLHLLGRGGFSEVYKAFDLTE--QRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYF 536 (775)
T ss_pred HHHHHhccccHHHHHHhcccch--hheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeee
Confidence 3456799999999999984322 2378999975332 111 23468999999999999999999875
No 431
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=97.00 E-value=1.9e-05 Score=78.09 Aligned_cols=280 Identities=20% Similarity=0.158 Sum_probs=165.7
Q ss_pred CCCCEEeCCCCCC-CccCChh-hcCCCCCcEEecCCCc-CcccCCccc-cCCCCCCEEEccCC-cCccCccc-cccCCCC
Q 046340 40 SFLRVLDLKNNSF-RDEIPQE-IGYLFRLQILALHNNT-FGGQIPDNI-SHCVNLESLGLGVN-ELVGKVPG-KLGSLSK 113 (715)
Q Consensus 40 ~~L~~L~Ls~n~i-~~~~~~~-~~~l~~L~~L~Ls~n~-i~~~~~~~~-~~l~~L~~L~L~~n-~l~~~~~~-~~~~l~~ 113 (715)
..|+.|.++++.= ....-.. -..++++++|.+.++. ++..-...+ ..+++|++|++..| .++...-. .-..+++
T Consensus 138 g~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~k 217 (483)
T KOG4341|consen 138 GFLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRK 217 (483)
T ss_pred cccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhh
Confidence 4788899988853 2222222 3568899999888875 222222223 36788999999885 34332222 2356899
Q ss_pred CCEEEeeccc-ccccc-CccccCCCCCCEEEcccCcceecCCccc----cCCCCCCEEEeeccc-CcccCC-ccccCCCC
Q 046340 114 LWILSVHYNS-LSGEI-PSSFGNLSSLEFLSAAANQFVGQFPETL----SELKMMRYISFGENK-LSGEIP-FSIYNLSS 185 (715)
Q Consensus 114 L~~L~Ls~n~-l~~~~-~~~~~~l~~L~~L~l~~n~~~~~~~~~l----~~l~~L~~L~L~~n~-i~~~~~-~~l~~l~~ 185 (715)
|++|+++.+. +++.. ...+.++..++.+.+.+|.-. ..+.+ +.+..+.++++..+. +++..- ..-..+..
T Consensus 218 L~~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~e~--~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~~c~~ 295 (483)
T KOG4341|consen 218 LKYLNLSWCPQISGNGVQALQRGCKELEKLSLKGCLEL--ELEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIACGCHA 295 (483)
T ss_pred HHHhhhccCchhhcCcchHHhccchhhhhhhhcccccc--cHHHHHHHhccChHhhccchhhhccccchHHHHHhhhhhH
Confidence 9999999886 44321 223566777787777765322 12222 344556667766653 333211 11234677
Q ss_pred CcEEEccCCc-cceecCcchhcCCCCCCEEEeeCcc-ccccCCccc-cCCCCCCEEEeecccceecc--cc-ccCcCCCc
Q 046340 186 LTHFYFPFNQ-LQGSLPSDLGFTLPNLEVLNVGGNQ-FTGPIPASI-SNASNLMRLTIAKNGFSGRV--PS-LENLYKLQ 259 (715)
Q Consensus 186 L~~L~l~~n~-i~~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~l-~~~~~L~~L~L~~n~~~~~~--~~-~~~l~~L~ 259 (715)
|+.++.+++. +++..-..++.+.++|+.+.+..++ +++.....+ .+++.|+.+++..+...... .. -.+++.|+
T Consensus 296 lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr 375 (483)
T KOG4341|consen 296 LQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCPRLR 375 (483)
T ss_pred hhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCchhc
Confidence 8888888753 3434444566678899999998886 333222223 35778899998887664332 11 45678899
Q ss_pred EEEcccCCCCCCCCCCccccccccccCCCCCEEEccCCccc-ccCChhHhhccccCcEEEccccce
Q 046340 260 WVSISHNHLGNYGEKDNLEFVNSLVNASRLELLEISDNNFG-GMLPEAVGNLSTRLRKLIVGNNQL 324 (715)
Q Consensus 260 ~L~l~~n~l~~~~~~~~~~~~~~l~~~~~L~~L~ls~n~i~-~~~~~~~~~~~~~L~~L~l~~n~i 324 (715)
.+.++++....-.. -..+-..-.....++.+.++++... +...+.+...+ .|+.+++-++.-
T Consensus 376 ~lslshce~itD~g--i~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~-~Leri~l~~~q~ 438 (483)
T KOG4341|consen 376 VLSLSHCELITDEG--IRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICR-NLERIELIDCQD 438 (483)
T ss_pred cCChhhhhhhhhhh--hhhhhhccccccccceeeecCCCCchHHHHHHHhhCc-ccceeeeechhh
Confidence 99998876432110 0011112234567888888888643 23333344443 588888877753
No 432
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=96.97 E-value=0.00072 Score=69.27 Aligned_cols=65 Identities=26% Similarity=0.410 Sum_probs=51.0
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCc--chHHHHHHHHHHhcCCCCCcceEEE
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRG--ASKSFMAQCQALRSVRHRNLVKIIT 712 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~--~~~~~~~e~~~l~~~~h~niv~l~g 712 (715)
..|...+.+|+|+||.++..+.+..+. .+++|.+...... ..+....|+.++++++|||||..+.
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~--~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~d 70 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDK--LYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKD 70 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCc--eEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeecc
Confidence 456667899999999999887765544 8999999754322 2346789999999999999998764
No 433
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=96.93 E-value=0.0012 Score=66.59 Aligned_cols=66 Identities=27% Similarity=0.353 Sum_probs=49.9
Q ss_pred CccccccCcCCCceEEEEEECCC-CceeEEEEEEeeccC----CcchHHHHHHHHHHhcC-CCCCcceEEEE
Q 046340 648 FSLENLIGAGSFGSVYKGILNHD-DHETLVAVKVLNLQH----RGASKSFMAQCQALRSV-RHRNLVKIITS 713 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~-~~~~~~avk~l~~~~----~~~~~~~~~e~~~l~~~-~h~niv~l~g~ 713 (715)
|...+.||+|+||.||+++...+ ..+..||||.++... ....+.+.+|+.++.++ +||||++++++
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~ 73 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYA 73 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhhee
Confidence 56678899999999999986422 123489999996432 12235688999999999 69999998765
No 434
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.91 E-value=3.7e-05 Score=71.91 Aligned_cols=84 Identities=19% Similarity=0.187 Sum_probs=49.0
Q ss_pred CCCCCEEEccCCcccccCChhHhhccccCcEEEccccceeecCCccccCCCCCCEEEcCCceeeeecC-ccccCCCCccE
Q 046340 286 ASRLELLEISDNNFGGMLPEAVGNLSTRLRKLIVGNNQLFGNIPSGLRNLVNLELLHLGGNQFTGQIP-GSIGDLHKLQW 364 (715)
Q Consensus 286 ~~~L~~L~ls~n~i~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~ 364 (715)
+.+.+.|++.++.+.++ .....+ +.|+.|.|+-|+|+...| |..|++|++|+|..|.|.++.. ..+.++|+|+.
T Consensus 18 l~~vkKLNcwg~~L~DI--sic~kM-p~lEVLsLSvNkIssL~p--l~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~ 92 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDI--SICEKM-PLLEVLSLSVNKISSLAP--LQRCTRLKELYLRKNCIESLDELEYLKNLPSLRT 92 (388)
T ss_pred HHHhhhhcccCCCccHH--HHHHhc-ccceeEEeeccccccchh--HHHHHHHHHHHHHhcccccHHHHHHHhcCchhhh
Confidence 34566677777766643 122233 337777777777764433 5667777777777777664322 34456666666
Q ss_pred EEccCCcccc
Q 046340 365 LMLPANEFWG 374 (715)
Q Consensus 365 L~L~~n~i~~ 374 (715)
|+|..|.-.+
T Consensus 93 LWL~ENPCc~ 102 (388)
T KOG2123|consen 93 LWLDENPCCG 102 (388)
T ss_pred HhhccCCccc
Confidence 6666665443
No 435
>PHA02882 putative serine/threonine kinase; Provisional
Probab=96.91 E-value=0.002 Score=65.17 Aligned_cols=69 Identities=22% Similarity=0.385 Sum_probs=44.8
Q ss_pred cCCccccccCcCCCceEEEEEECCCCc-eeEEEEEEeeccCCcc--h---------HHHHHHHHHHhcCCCCCcceEEEE
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDH-ETLVAVKVLNLQHRGA--S---------KSFMAQCQALRSVRHRNLVKIITS 713 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~-~~~~avk~l~~~~~~~--~---------~~~~~e~~~l~~~~h~niv~l~g~ 713 (715)
..|...+.||+|+||.||+|+..++.. ...+|+|......... . .....+...+..++|+++++++|+
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 467888999999999999999765411 1256666543222110 0 112234455667899999999986
Q ss_pred e
Q 046340 714 C 714 (715)
Q Consensus 714 ~ 714 (715)
+
T Consensus 92 ~ 92 (294)
T PHA02882 92 G 92 (294)
T ss_pred e
Confidence 4
No 436
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=96.90 E-value=0.0027 Score=60.23 Aligned_cols=59 Identities=24% Similarity=0.472 Sum_probs=48.8
Q ss_pred cCcCCCceEEEEEECCCCceeEEEEEEeeccCCc-chHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 654 IGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRG-ASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 654 lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~-~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
||+|++|.||+++..+++ ..+++|........ ..+.+.+|+..+++++|++|+++++++
T Consensus 1 l~~g~~~~v~~~~~~~~~--~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~ 60 (215)
T cd00180 1 LGEGGFGTVYLARDKKTG--KKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60 (215)
T ss_pred CCcCCceEEEEEEecCCC--cEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeee
Confidence 689999999999986533 38999999755432 346799999999999999999999875
No 437
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=96.89 E-value=0.0019 Score=66.51 Aligned_cols=59 Identities=24% Similarity=0.300 Sum_probs=43.3
Q ss_pred cCcCCCceEEEEEECCCCceeEEEEEEeeccCC---cchHHHHHHHHHHhcC---CCCCcceEEEEe
Q 046340 654 IGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR---GASKSFMAQCQALRSV---RHRNLVKIITSC 714 (715)
Q Consensus 654 lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~---~~~~~~~~e~~~l~~~---~h~niv~l~g~~ 714 (715)
||+|+||.||+|+....+ ..||||.+..... .....+.+|..++.+. +||||+++++++
T Consensus 1 lG~G~~g~Vy~~~~~~~~--~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~ 65 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTR--RIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSF 65 (330)
T ss_pred CCCCCceEEEEEEECCCC--CEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEE
Confidence 699999999999976543 4899999964321 1223456677777665 799999998764
No 438
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=96.88 E-value=0.00013 Score=76.62 Aligned_cols=68 Identities=31% Similarity=0.476 Sum_probs=55.0
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
..+|.....+|.|.||.|||++- ..++..+|||.++..........+.||-+++.++|||||.++|-+
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd--~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsy 81 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARD--KRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSY 81 (829)
T ss_pred ccchhheeeecCCcccchhhhcc--cccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhh
Confidence 45677788999999999999994 344558999999865544445678999999999999999888754
No 439
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=96.79 E-value=0.00054 Score=65.60 Aligned_cols=69 Identities=20% Similarity=0.398 Sum_probs=51.2
Q ss_pred HHHHHHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcC-CCCCcceEEEE
Q 046340 638 YQNLIKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSV-RHRNLVKIITS 713 (715)
Q Consensus 638 ~~~~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~g~ 713 (715)
++++.+-|+ +.+|+|+|+.|--++--. ++..+|||+++...-.......||++++.++ .|+||+.|+.+
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~--t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLief 144 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQ--TGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEF 144 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeec--cchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHH
Confidence 455555543 679999999998887332 3447999999866433345688999999998 69999987653
No 440
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=96.68 E-value=0.0038 Score=61.78 Aligned_cols=61 Identities=23% Similarity=0.259 Sum_probs=43.5
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccCC---cchHHHHHHHHHH-hcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR---GASKSFMAQCQAL-RSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~---~~~~~~~~e~~~l-~~~~h~niv~l~g~~ 714 (715)
+.||+|+||.||+|+....+ ..||||.++.... .....+..|..++ ...+|||++++++++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~--~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~ 66 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTG--DYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSF 66 (260)
T ss_pred ccCCcCCCeeEEEEEecCCC--CeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeE
Confidence 46899999999999975543 3899999964321 1223455555554 456999999999875
No 441
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.61 E-value=8.8e-05 Score=69.48 Aligned_cols=100 Identities=22% Similarity=0.211 Sum_probs=57.2
Q ss_pred CCCCCEEeCCCCCCCccCChhhcCCCCCcEEecCCCcCcccCCccccCCCCCCEEEccCCcCccCcc-ccccCCCCCCEE
Q 046340 39 LSFLRVLDLKNNSFRDEIPQEIGYLFRLQILALHNNTFGGQIPDNISHCVNLESLGLGVNELVGKVP-GKLGSLSKLWIL 117 (715)
Q Consensus 39 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L 117 (715)
+...+.|++-+|.|+++ .....++.|++|.||-|+|+.. ..|.+|++|++|+|..|.|.++.. ..+.++++|+.|
T Consensus 18 l~~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL--~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~L 93 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSL--APLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTL 93 (388)
T ss_pred HHHhhhhcccCCCccHH--HHHHhcccceeEEeeccccccc--hhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhH
Confidence 44555666666666543 2244566666666666666533 235666666666666666653322 224566777777
Q ss_pred EeeccccccccCc-----cccCCCCCCEEE
Q 046340 118 SVHYNSLSGEIPS-----SFGNLSSLEFLS 142 (715)
Q Consensus 118 ~Ls~n~l~~~~~~-----~~~~l~~L~~L~ 142 (715)
.|..|.-.+..+. .+.-+++|+.|+
T Consensus 94 WL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 94 WLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred hhccCCcccccchhHHHHHHHHcccchhcc
Confidence 7766654433221 245567777775
No 442
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=96.53 E-value=0.0012 Score=75.02 Aligned_cols=65 Identities=29% Similarity=0.475 Sum_probs=51.5
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeecc--CCcchHHHHHHHHHHhcCCCCCcceEEEE
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQ--HRGASKSFMAQCQALRSVRHRNLVKIITS 713 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~--~~~~~~~~~~e~~~l~~~~h~niv~l~g~ 713 (715)
+++..+.||.|.||.||-|.-.+ +|...|||.+... ..+......+|+.++..++|||+|+.+|+
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~--tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGV 1302 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLD--TGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGV 1302 (1509)
T ss_pred eeccccccCCcceeeeEEeecCC--ccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCce
Confidence 34567889999999999999544 4558899998633 22333567899999999999999999996
No 443
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=96.42 E-value=0.0034 Score=66.44 Aligned_cols=68 Identities=16% Similarity=0.288 Sum_probs=54.2
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC---cchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR---GASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~---~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
.+-|...+.+|.|+-|.|..|+... +|+.+|||.+..+.. .......+||.+|+=+.||||++++.++
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~--TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVw 81 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAE--TGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVW 81 (786)
T ss_pred ccceeccccccCCCCceehhhhccc--ccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeee
Confidence 3445667889999999999999654 456999999976531 2234688999999999999999999875
No 444
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=96.40 E-value=0.0088 Score=59.93 Aligned_cols=60 Identities=20% Similarity=0.252 Sum_probs=41.1
Q ss_pred ccCcCCCceEEEEEECCCCceeEEEEEEeeccCC---cchHHHHHHHHHH---hcCCCCCcceEEEEe
Q 046340 653 LIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR---GASKSFMAQCQAL---RSVRHRNLVKIITSC 714 (715)
Q Consensus 653 ~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~---~~~~~~~~e~~~l---~~~~h~niv~l~g~~ 714 (715)
.||+|+||.||++....++ ..+|+|.+..... .....+.+|..++ ...+||||+++++++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 66 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTG--KMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAF 66 (279)
T ss_pred CcccCCCeEEEEEEECCCC--cEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEE
Confidence 4899999999999976543 4899999965421 1122344554433 345899999988764
No 445
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=96.37 E-value=0.0018 Score=63.95 Aligned_cols=75 Identities=23% Similarity=0.365 Sum_probs=53.4
Q ss_pred HHHhhcCCccccccCcCCCceEEEEEECCCCce---eEEEEEEeeccC-CcchHHHHHHHHHHhcCCCCCcceEEEEeC
Q 046340 641 LIKATDGFSLENLIGAGSFGSVYKGILNHDDHE---TLVAVKVLNLQH-RGASKSFMAQCQALRSVRHRNLVKIITSCA 715 (715)
Q Consensus 641 ~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~---~~~avk~l~~~~-~~~~~~~~~e~~~l~~~~h~niv~l~g~~~ 715 (715)
+......+.....+-+|.||.||+|.|.+.++- +.|-||.++..+ .-+...+..|.-.+..+.|||+....|+|.
T Consensus 279 l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 279 LTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred hhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEe
Confidence 333344466667788999999999988654320 134577775443 223456889999999999999999999874
No 446
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=96.31 E-value=0.0041 Score=63.54 Aligned_cols=59 Identities=25% Similarity=0.246 Sum_probs=42.6
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeecc--CCcchHHHHHHHHHHhcCCCCCcceEEEEe
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQ--HRGASKSFMAQCQALRSVRHRNLVKIITSC 714 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~--~~~~~~~~~~e~~~l~~~~h~niv~l~g~~ 714 (715)
+..|.|+++.||+++. + +..||||++... .....+.+.+|+.++++++||||+++++++
T Consensus 8 ~~~~~~~~v~~~~~~~--~--~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~ 68 (314)
T cd08216 8 KCFEDLMIVHLAKHKP--T--NTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSF 68 (314)
T ss_pred HhhcCCceEEEEEecC--C--CCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhhee
Confidence 3445556666666653 2 348999999644 223346799999999999999999998864
No 447
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=96.31 E-value=0.0023 Score=69.46 Aligned_cols=59 Identities=31% Similarity=0.412 Sum_probs=46.9
Q ss_pred CccccccCcCCCc-eEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcC-CCCCcceEEEE
Q 046340 648 FSLENLIGAGSFG-SVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSV-RHRNLVKIITS 713 (715)
Q Consensus 648 f~~~~~lg~g~~g-~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~g~ 713 (715)
|...+++|.|.-| .||+|.+.++ .||||++-... .+-..|||..++.- .|||||+++|.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye~R----~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~ 571 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYEGR----EVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCS 571 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeCCc----eehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEee
Confidence 5566788888888 5799999665 89999995432 23457999999988 79999999874
No 448
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=96.25 E-value=0.014 Score=57.92 Aligned_cols=65 Identities=15% Similarity=0.163 Sum_probs=42.9
Q ss_pred HhhcCCcccccc--CcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 643 KATDGFSLENLI--GAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 643 ~~~~~f~~~~~l--g~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
...++|...+.+ |+|+||.||+++...++ ..+|+|.......... |+.....+ +||||+++++++
T Consensus 11 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~ 78 (267)
T PHA03390 11 QFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQ--KLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSV 78 (267)
T ss_pred HHHHhhccccceeecCCCceEEEEEEEcCCC--cEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEE
Confidence 334555555555 99999999999976543 4899999865432211 22222212 799999999886
No 449
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=96.24 E-value=0.007 Score=66.68 Aligned_cols=69 Identities=14% Similarity=0.077 Sum_probs=47.0
Q ss_pred HHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeecc--CC------cchHHHHHHHHHHhcCCCCCcceEEEE
Q 046340 642 IKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQ--HR------GASKSFMAQCQALRSVRHRNLVKIITS 713 (715)
Q Consensus 642 ~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~--~~------~~~~~~~~e~~~l~~~~h~niv~l~g~ 713 (715)
......|...+.||+|+||.||+|.+.+. .+++|+.... .. ...+.+.+|++++.+++|++++..+.+
T Consensus 329 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~----~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~ 404 (535)
T PRK09605 329 EEVKRRKIPDHLIGKGAEADIKKGEYLGR----DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIY 404 (535)
T ss_pred cccccccCccceeccCCcEEEEEEeecCc----cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEE
Confidence 33344456678999999999999998655 2344432111 11 112458899999999999999876655
Q ss_pred e
Q 046340 714 C 714 (715)
Q Consensus 714 ~ 714 (715)
+
T Consensus 405 ~ 405 (535)
T PRK09605 405 D 405 (535)
T ss_pred E
Confidence 4
No 450
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=96.24 E-value=0.0047 Score=57.51 Aligned_cols=55 Identities=15% Similarity=0.173 Sum_probs=38.6
Q ss_pred ccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCc--c-------hHHH-----------------HHHHHHHhcCCC
Q 046340 651 ENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRG--A-------SKSF-----------------MAQCQALRSVRH 704 (715)
Q Consensus 651 ~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~--~-------~~~~-----------------~~e~~~l~~~~h 704 (715)
...||+|+||.||+|...+ +..||||.++..... . ...| .+|+.++.++.|
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~---g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 78 (190)
T cd05147 2 NGCISTGKEANVYHATTAN---GEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVT 78 (190)
T ss_pred CCccccccceEEEEEECCC---CCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3679999999999999753 348999999754211 1 0112 349999999877
Q ss_pred CCcc
Q 046340 705 RNLV 708 (715)
Q Consensus 705 ~niv 708 (715)
+++.
T Consensus 79 ~~v~ 82 (190)
T cd05147 79 AGIP 82 (190)
T ss_pred CCCC
Confidence 6653
No 451
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=96.23 E-value=0.0069 Score=57.47 Aligned_cols=65 Identities=9% Similarity=-0.051 Sum_probs=50.1
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHH---------HHHHHHHHhcCCCCCcceEEEE
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKS---------FMAQCQALRSVRHRNLVKIITS 713 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~---------~~~e~~~l~~~~h~niv~l~g~ 713 (715)
.+.|...+.+|.|+||.||..... + ..+|+|.+.+.....++. |.+|+..+.++.||+|+....+
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~~-~---~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~ 103 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDTD-Y---GKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDF 103 (232)
T ss_pred hCceEEEEEecCCCceEEEEEecC-C---CcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEe
Confidence 567888899999999999986542 2 269999997543322222 6899999999999999877655
No 452
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=96.11 E-value=0.002 Score=64.97 Aligned_cols=68 Identities=21% Similarity=0.323 Sum_probs=54.6
Q ss_pred hhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEE
Q 046340 644 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITS 713 (715)
Q Consensus 644 ~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~ 713 (715)
..+.|..-++||+|+||.||-++.+.+ |+++|+|.+.... ++++.....|-.++.+++.|.||.+-.+
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraT--GKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYA 253 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRAT--GKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYA 253 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecc--hhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeee
Confidence 356678889999999999999998755 5699999996432 3445567899999999999999987554
No 453
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=96.07 E-value=0.014 Score=58.44 Aligned_cols=60 Identities=18% Similarity=0.226 Sum_probs=41.1
Q ss_pred ccCcCCCceEEEEEECCCCceeEEEEEEeeccCC---cchHHHHHHHH---HHhcCCCCCcceEEEEe
Q 046340 653 LIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR---GASKSFMAQCQ---ALRSVRHRNLVKIITSC 714 (715)
Q Consensus 653 ~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~---~~~~~~~~e~~---~l~~~~h~niv~l~g~~ 714 (715)
.||+|+||.||++..... +..||+|.+..... .....+..|.. .++...||+|+++++++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 66 (278)
T cd05606 1 IIGRGGFGEVYGCRKADT--GKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF 66 (278)
T ss_pred CcccCCCeEEEEEEEecC--CCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeee
Confidence 479999999999986544 34899999865321 11223444443 44556899999988764
No 454
>PRK14879 serine/threonine protein kinase; Provisional
Probab=96.06 E-value=0.01 Score=56.49 Aligned_cols=58 Identities=12% Similarity=0.058 Sum_probs=42.7
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeeccCCc--------chHHHHHHHHHHhcCCCCCcceEEEE
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRG--------ASKSFMAQCQALRSVRHRNLVKIITS 713 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~--------~~~~~~~e~~~l~~~~h~niv~l~g~ 713 (715)
+.||+|++|.||+|.+.+. .+++|........ ....+.+|+.++..+.|++++....+
T Consensus 2 ~~l~~G~~~~vy~~~~~~~----~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~ 67 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGI----KAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVY 67 (211)
T ss_pred cccccCceEEEEEEeeCCC----ceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEE
Confidence 5689999999999997443 6889986533211 11357889999999999988765544
No 455
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=95.97 E-value=0.016 Score=54.03 Aligned_cols=56 Identities=14% Similarity=0.132 Sum_probs=40.9
Q ss_pred ccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCc---------------------c-----hHHHHHHHHHHhcCCC
Q 046340 651 ENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRG---------------------A-----SKSFMAQCQALRSVRH 704 (715)
Q Consensus 651 ~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~---------------------~-----~~~~~~e~~~l~~~~h 704 (715)
...||+|+||.||+|+..+ +..||||.++..... . ...+.+|...+.++.|
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~---g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 78 (190)
T cd05145 2 NGCISTGKEANVYHARTGD---GEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYE 78 (190)
T ss_pred CceeecCCCcEEEEEEcCC---CCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHh
Confidence 3679999999999999653 348999999754211 0 1123588999999999
Q ss_pred CCcce
Q 046340 705 RNLVK 709 (715)
Q Consensus 705 ~niv~ 709 (715)
+++..
T Consensus 79 ~~i~~ 83 (190)
T cd05145 79 AGVPV 83 (190)
T ss_pred CCCCC
Confidence 98743
No 456
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=95.93 E-value=0.0006 Score=74.56 Aligned_cols=239 Identities=19% Similarity=0.103 Sum_probs=126.4
Q ss_pred ccCCCCCCEEeCCCC-CCCcc-CChhhcCCCCCcEEecCCC-cCcccC----CccccCCCCCCEEEccCCc-CccCcccc
Q 046340 36 IGNLSFLRVLDLKNN-SFRDE-IPQEIGYLFRLQILALHNN-TFGGQI----PDNISHCVNLESLGLGVNE-LVGKVPGK 107 (715)
Q Consensus 36 ~~~l~~L~~L~Ls~n-~i~~~-~~~~~~~l~~L~~L~Ls~n-~i~~~~----~~~~~~l~~L~~L~L~~n~-l~~~~~~~ 107 (715)
...++.|+.|.+..+ .+.+. ........++|+.|+++++ ...... ......+++|+.|+++++. +++..-..
T Consensus 184 ~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~ 263 (482)
T KOG1947|consen 184 LSSCPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSA 263 (482)
T ss_pred HhhCchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHH
Confidence 344788888888877 34432 2234566888888888863 211111 1234466788888888887 55444444
Q ss_pred ccC-CCCCCEEEeeccc-cccccC-ccccCCCCCCEEEcccCcceec--CCccccCCCCCCEEEeecccCcccCCccccC
Q 046340 108 LGS-LSKLWILSVHYNS-LSGEIP-SSFGNLSSLEFLSAAANQFVGQ--FPETLSELKMMRYISFGENKLSGEIPFSIYN 182 (715)
Q Consensus 108 ~~~-l~~L~~L~Ls~n~-l~~~~~-~~~~~l~~L~~L~l~~n~~~~~--~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~ 182 (715)
+.. +++|+.|.+.++. ++...- .....++.|++|+++.+..... .......+++|+.|.+.... .
T Consensus 264 l~~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c~~l~~l~~~~~~----------~ 333 (482)
T KOG1947|consen 264 LASRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALLKNCPNLRELKLLSLN----------G 333 (482)
T ss_pred HHhhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHHHhCcchhhhhhhhcC----------C
Confidence 433 7788888877766 443222 2345577888888887765311 11123345666654433221 1
Q ss_pred CCCCcEEEccCCccc--eecCcchhcCCCCCCEEEeeCccccccC-CccccCCCCCCEEEeecccceeccccccCcCCCc
Q 046340 183 LSSLTHFYFPFNQLQ--GSLPSDLGFTLPNLEVLNVGGNQFTGPI-PASISNASNLMRLTIAKNGFSGRVPSLENLYKLQ 259 (715)
Q Consensus 183 l~~L~~L~l~~n~i~--~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~l~~~~~L~~L~L~~n~~~~~~~~~~~l~~L~ 259 (715)
+..++.+.+...... +.........+++++.+.+..+...... ...+.++++|+ ..+... ......++
T Consensus 334 c~~l~~~~l~~~~~~~~d~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~l~gc~~l~-~~l~~~--------~~~~~~l~ 404 (482)
T KOG1947|consen 334 CPSLTDLSLSGLLTLTSDDLAELILRSCPKLTDLSLSYCGISDLGLELSLRGCPNLT-ESLELR--------LCRSDSLR 404 (482)
T ss_pred CccHHHHHHHHhhccCchhHhHHHHhcCCCcchhhhhhhhccCcchHHHhcCCcccc-hHHHHH--------hccCCccc
Confidence 333444443332211 1223333446778888888777744332 24455666662 222111 11112267
Q ss_pred EEEcccCCCCCCCCCCcccccccccc-CCCCCEEEccCCcc
Q 046340 260 WVSISHNHLGNYGEKDNLEFVNSLVN-ASRLELLEISDNNF 299 (715)
Q Consensus 260 ~L~l~~n~l~~~~~~~~~~~~~~l~~-~~~L~~L~ls~n~i 299 (715)
.|+++.+...... .+..... +..++.+++.++..
T Consensus 405 ~L~l~~~~~~t~~------~l~~~~~~~~~~~~l~~~~~~~ 439 (482)
T KOG1947|consen 405 VLNLSDCRLVTDK------GLRCLADSCSNLKDLDLSGCRV 439 (482)
T ss_pred eEecccCcccccc------chHHHhhhhhccccCCccCccc
Confidence 7777766543211 1111111 55667777776654
No 457
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=95.85 E-value=0.0074 Score=56.76 Aligned_cols=68 Identities=16% Similarity=0.278 Sum_probs=52.8
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC--cc------hHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR--GA------SKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~--~~------~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
-+.|.+.+++|+|.-+.|.++..+.+. ..+|+|++...+. +. .+...+|+.|++++ .||+|+++..++
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~--~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETG--KEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccc--cceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 445778899999999999999987653 4899999974431 11 23567899999997 899999998764
No 458
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=95.64 E-value=0.00094 Score=73.00 Aligned_cols=236 Identities=18% Similarity=0.126 Sum_probs=139.0
Q ss_pred cCCCCCcEEecCCCcCccc--CCccccCCCCCCEEEccCC-cCccCcc----ccccCCCCCCEEEeeccc-cccccCccc
Q 046340 61 GYLFRLQILALHNNTFGGQ--IPDNISHCVNLESLGLGVN-ELVGKVP----GKLGSLSKLWILSVHYNS-LSGEIPSSF 132 (715)
Q Consensus 61 ~~l~~L~~L~Ls~n~i~~~--~~~~~~~l~~L~~L~L~~n-~l~~~~~----~~~~~l~~L~~L~Ls~n~-l~~~~~~~~ 132 (715)
..++.|+.|.+..+.-... .-.....+++|++|+++++ ......+ .....+.+|+.|+++++. ++...-..+
T Consensus 185 ~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l 264 (482)
T KOG1947|consen 185 SSCPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSAL 264 (482)
T ss_pred hhCchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHH
Confidence 3479999999998743322 2344568899999999983 2221222 234567899999999988 664444444
Q ss_pred cC-CCCCCEEEcccCc-ceecCCcc-ccCCCCCCEEEeecccCccc--CCccccCCCCCcEEEccCCccceecCcchhcC
Q 046340 133 GN-LSSLEFLSAAANQ-FVGQFPET-LSELKMMRYISFGENKLSGE--IPFSIYNLSSLTHFYFPFNQLQGSLPSDLGFT 207 (715)
Q Consensus 133 ~~-l~~L~~L~l~~n~-~~~~~~~~-l~~l~~L~~L~L~~n~i~~~--~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~~ 207 (715)
.. +++|++|.+.++. +++..-.. ...++.|++|+++++..... ......++++++.+.+.... .
T Consensus 265 ~~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c~~l~~l~~~~~~-----------~ 333 (482)
T KOG1947|consen 265 ASRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALLKNCPNLRELKLLSLN-----------G 333 (482)
T ss_pred HhhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHHHhCcchhhhhhhhcC-----------C
Confidence 43 7899999988887 44332222 35688899999998875311 22234456766665544321 1
Q ss_pred CCCCCEEEeeCcccc---ccCCccccCCCCCCEEEeecccceecc--ccccCcCCCcEEEcccCCCCCCCCCCccccccc
Q 046340 208 LPNLEVLNVGGNQFT---GPIPASISNASNLMRLTIAKNGFSGRV--PSLENLYKLQWVSISHNHLGNYGEKDNLEFVNS 282 (715)
Q Consensus 208 l~~L~~L~L~~n~l~---~~~~~~l~~~~~L~~L~L~~n~~~~~~--~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~ 282 (715)
++.++.+.+.+..-. .........+++++.+.+..+...... ..+.+++.|. ..+...
T Consensus 334 c~~l~~~~l~~~~~~~~d~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~l~gc~~l~-~~l~~~---------------- 396 (482)
T KOG1947|consen 334 CPSLTDLSLSGLLTLTSDDLAELILRSCPKLTDLSLSYCGISDLGLELSLRGCPNLT-ESLELR---------------- 396 (482)
T ss_pred CccHHHHHHHHhhccCchhHhHHHHhcCCCcchhhhhhhhccCcchHHHhcCCcccc-hHHHHH----------------
Confidence 344455544443221 123335678999999999988744332 1266666663 222211
Q ss_pred cccCCCCCEEEccCCccccc-CChhHhhccccCcEEEccccce
Q 046340 283 LVNASRLELLEISDNNFGGM-LPEAVGNLSTRLRKLIVGNNQL 324 (715)
Q Consensus 283 l~~~~~L~~L~ls~n~i~~~-~~~~~~~~~~~L~~L~l~~n~i 324 (715)
......++.|+++.+..... .-.........++.+++.++..
T Consensus 397 ~~~~~~l~~L~l~~~~~~t~~~l~~~~~~~~~~~~l~~~~~~~ 439 (482)
T KOG1947|consen 397 LCRSDSLRVLNLSDCRLVTDKGLRCLADSCSNLKDLDLSGCRV 439 (482)
T ss_pred hccCCccceEecccCccccccchHHHhhhhhccccCCccCccc
Confidence 11223388899888764322 1112211123367777777654
No 459
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=95.61 E-value=0.019 Score=54.26 Aligned_cols=62 Identities=16% Similarity=0.247 Sum_probs=48.8
Q ss_pred ccccCcCCCceEEEEEECCCCceeEEEEEEeeccC-CcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 651 ENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH-RGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 651 ~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~-~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
...+|.|..|.|++++++..+ ..+|||.+.... +...+.....+.++... +-|.||+-+||.
T Consensus 97 l~dlGsGtcG~V~k~~~rs~~--~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyF 160 (391)
T KOG0983|consen 97 LGDLGSGTCGQVWKMRFRSTG--HIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYF 160 (391)
T ss_pred HHhhcCCCccceEEEEEcccc--eEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEE
Confidence 356899999999999987653 489999997653 33345677788887765 489999999985
No 460
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.60 E-value=0.0043 Score=58.14 Aligned_cols=63 Identities=24% Similarity=0.344 Sum_probs=48.5
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcCCCCCcceEE
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSVRHRNLVKII 711 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~~h~niv~l~ 711 (715)
+.++++.||-|.||.||..+-+ ..++.||.|++...- .-..+.+.+|++++.-.+|.|+...+
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDP--RdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaL 118 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDP--RSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLL 118 (449)
T ss_pred cCCCCCcccccceeEEEeccCC--CCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHH
Confidence 4567899999999999998843 345689999996432 12345688999999999999987543
No 461
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=95.53 E-value=0.028 Score=52.88 Aligned_cols=64 Identities=25% Similarity=0.248 Sum_probs=43.9
Q ss_pred HHHHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC--c--------------------chHHHHHHHH
Q 046340 640 NLIKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR--G--------------------ASKSFMAQCQ 697 (715)
Q Consensus 640 ~~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~--~--------------------~~~~~~~e~~ 697 (715)
++......+...+.||+|+||.||+|...++ ..||||+++.... . ....+.+|+.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g---~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 85 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDG---NPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFA 85 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCC---CEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHH
Confidence 3333333466778999999999999987543 3899998754220 0 0123678899
Q ss_pred HHhcCCCCC
Q 046340 698 ALRSVRHRN 706 (715)
Q Consensus 698 ~l~~~~h~n 706 (715)
++..+.|++
T Consensus 86 ~l~~l~~~~ 94 (198)
T cd05144 86 ALKALYEEG 94 (198)
T ss_pred HHHHHHHcC
Confidence 999887773
No 462
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.24 E-value=0.0079 Score=57.97 Aligned_cols=64 Identities=22% Similarity=0.402 Sum_probs=49.8
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeecc---CCcchHHHHHHHHHHhcCCCCCcceE
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQ---HRGASKSFMAQCQALRSVRHRNLVKI 710 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~---~~~~~~~~~~e~~~l~~~~h~niv~l 710 (715)
.++|+..+++|+|.||+|-.++-+. +++.+|+|+++.. ++.....-..|-+++...+||.+..+
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKa--t~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~L 233 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKA--TGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSL 233 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecc--cCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHh
Confidence 5678888999999999999998543 4569999999753 23333456789999999999987654
No 463
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=95.18 E-value=0.0097 Score=59.64 Aligned_cols=69 Identities=23% Similarity=0.361 Sum_probs=53.0
Q ss_pred HhhcCCccccccCcCCCceEEEEEECCC-CceeEEEEEEeeccCCcchHHHHHHHHHHhcC-CCCCcceEEEE
Q 046340 643 KATDGFSLENLIGAGSFGSVYKGILNHD-DHETLVAVKVLNLQHRGASKSFMAQCQALRSV-RHRNLVKIITS 713 (715)
Q Consensus 643 ~~~~~f~~~~~lg~g~~g~vy~~~~~~~-~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~g~ 713 (715)
...+.|...++||+|.|+.||+++.... .....||+|.+...+. .....+|+++|..+ .|.||+++.++
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~ 103 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGC 103 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhh
Confidence 3455677789999999999999997651 1234799999975532 34588999999998 68899988775
No 464
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=94.78 E-value=0.0073 Score=68.00 Aligned_cols=71 Identities=21% Similarity=0.317 Sum_probs=56.1
Q ss_pred HHHHHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEE
Q 046340 639 QNLIKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKII 711 (715)
Q Consensus 639 ~~~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~ 711 (715)
.++.....+|...++||+|+||.|...+++.+.. .||+|++..+. +.....|..|-.+|..-+.+.||.+.
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~--VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~Lh 141 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEK--VYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLH 141 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeecccc--chhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHH
Confidence 4555667889999999999999999999876644 89999997642 33345688899999988888888654
No 465
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=94.77 E-value=0.06 Score=47.76 Aligned_cols=58 Identities=14% Similarity=0.110 Sum_probs=45.5
Q ss_pred ccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCC--CCcceEEEEe
Q 046340 651 ENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRH--RNLVKIITSC 714 (715)
Q Consensus 651 ~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h--~niv~l~g~~ 714 (715)
.+.+|+|.++.||+++..+. .+++|....... ..++.+|+.++..++| +.+++++++.
T Consensus 3 ~~~i~~g~~~~v~~~~~~~~----~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~ 62 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKDE----DYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASG 62 (155)
T ss_pred ceecccccccceEEEEecCC----eEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEc
Confidence 36789999999999997543 799999864432 4579999999999976 4888877653
No 466
>smart00090 RIO RIO-like kinase.
Probab=94.45 E-value=0.088 Score=50.94 Aligned_cols=61 Identities=13% Similarity=0.087 Sum_probs=42.0
Q ss_pred HhhcCCccccccCcCCCceEEEEE-ECCCCceeEEEEEEeeccCCc-------------------c-----hHHHHHHHH
Q 046340 643 KATDGFSLENLIGAGSFGSVYKGI-LNHDDHETLVAVKVLNLQHRG-------------------A-----SKSFMAQCQ 697 (715)
Q Consensus 643 ~~~~~f~~~~~lg~g~~g~vy~~~-~~~~~~~~~~avk~l~~~~~~-------------------~-----~~~~~~e~~ 697 (715)
.....|.....||+|+||.||+|+ .... +..||||.++..... . ...+.+|+.
T Consensus 25 ~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~--g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 102 (237)
T smart00090 25 NRGILSAIGGCISTGKEANVYHALDFDGS--GKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFR 102 (237)
T ss_pred hcCchHHhCCeeccCcceeEEEEEecCCC--CcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHH
Confidence 333356778899999999999998 3222 348999999743210 0 123568999
Q ss_pred HHhcCCCC
Q 046340 698 ALRSVRHR 705 (715)
Q Consensus 698 ~l~~~~h~ 705 (715)
++.++.|.
T Consensus 103 ~L~~L~~~ 110 (237)
T smart00090 103 NLQRLYEA 110 (237)
T ss_pred HHHHHHhc
Confidence 99998753
No 467
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=94.45 E-value=0.033 Score=50.48 Aligned_cols=72 Identities=18% Similarity=0.172 Sum_probs=51.1
Q ss_pred HHHhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCC-cchHHHHHHHHHHhc-CCCCCcceEEEEe
Q 046340 641 LIKATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHR-GASKSFMAQCQALRS-VRHRNLVKIITSC 714 (715)
Q Consensus 641 ~~~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~-~~~~~~~~e~~~l~~-~~h~niv~l~g~~ 714 (715)
++....+......||+|+||.|-+-++... |+..|||+++..-. +..+...+|+.+..+ ..-|.+|.|+|+.
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~s--g~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~ 114 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQS--GTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGAL 114 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccC--CeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhh
Confidence 344444555567899999999877776543 44899999975432 233567788887654 5899999999964
No 468
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=94.24 E-value=0.021 Score=31.57 Aligned_cols=12 Identities=33% Similarity=0.315 Sum_probs=5.2
Q ss_pred CCEEEeeccccc
Q 046340 114 LWILSVHYNSLS 125 (715)
Q Consensus 114 L~~L~Ls~n~l~ 125 (715)
|++||+++|+++
T Consensus 2 L~~Ldls~n~l~ 13 (22)
T PF00560_consen 2 LEYLDLSGNNLT 13 (22)
T ss_dssp ESEEEETSSEES
T ss_pred ccEEECCCCcCE
Confidence 344444444444
No 469
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=94.12 E-value=0.03 Score=58.29 Aligned_cols=67 Identities=15% Similarity=0.285 Sum_probs=52.0
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC--CcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH--RGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~--~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
...|++.+.||+||-+.||++.-.+. + .+|+|+..... .+....|..||+.+.++ .|.+||.++.|-
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~-~--iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYE 429 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDK-Q--IYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYE 429 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCC-c--chhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeee
Confidence 44577789999999999999985443 3 68888774322 23345799999999999 689999999883
No 470
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=93.99 E-value=0.061 Score=50.00 Aligned_cols=31 Identities=29% Similarity=0.353 Sum_probs=25.0
Q ss_pred ccccCcCCCceEEEEEECCCCceeEEEEEEeecc
Q 046340 651 ENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQ 684 (715)
Q Consensus 651 ~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~ 684 (715)
.+.||+|+||.||+|...++ ..||||.+...
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~---~~vavKv~~~~ 32 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDG---EPVAVKIYRTG 32 (187)
T ss_pred CcccccccceeEEEEECCCC---CEEEEEEEecC
Confidence 36799999999999997633 38999998653
No 471
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=93.89 E-value=0.018 Score=55.64 Aligned_cols=69 Identities=20% Similarity=0.267 Sum_probs=52.3
Q ss_pred HhhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcc---hHHHHHHHHHHhcC-CCCCcceEEEE
Q 046340 643 KATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGA---SKSFMAQCQALRSV-RHRNLVKIITS 713 (715)
Q Consensus 643 ~~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~---~~~~~~e~~~l~~~-~h~niv~l~g~ 713 (715)
....+|...++||+|+|++|..+++..+++ .+|+|.++..-... ..=.+.|-.+..+- +||.+|.+..|
T Consensus 247 l~l~df~ll~vigrgsyakvl~~~~~~t~q--iyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhsc 319 (593)
T KOG0695|consen 247 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDQ--IYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSC 319 (593)
T ss_pred cccccceeeeeecCcchhhhhheehcccce--eeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhh
Confidence 346789999999999999999999987766 89999997543222 22356677777654 89999987654
No 472
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=93.73 E-value=0.00055 Score=72.67 Aligned_cols=143 Identities=26% Similarity=0.266 Sum_probs=77.8
Q ss_pred CCCCeEeccCCcccccC----CcccccCCCCCEEeCcCcccccccCccccccccccceEEccCCcccccCCcCCcCCCCC
Q 046340 384 TSLAILAFDENMLEGSI----PSSLGKCQNLILLDLSNNNLSGTIPTEVIGLSSLSIYLDLSQNQLNGSLPPNFGILKNL 459 (715)
Q Consensus 384 ~~L~~L~l~~n~i~~~~----~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~L~Ls~n~i~~~~~~~~~~l~~L 459 (715)
..+++|++..|.++... ...+.....++.++++.|.+.. ....-... ..+..+....++
T Consensus 144 ~~l~~L~l~~c~l~~~g~~~l~~~L~~~~~l~~l~l~~n~l~~---~g~~~l~~--------------~l~~~~~~~~~l 206 (478)
T KOG4308|consen 144 CLLQTLELVSCSLTSEGAAPLAAVLEKNEHLTELDLSLNGLIE---LGLLVLSQ--------------ALESAASPLSSL 206 (478)
T ss_pred HHHHHHHhhcccccccchHHHHHHHhcccchhHHHHHhcccch---hhhHHHhh--------------hhhhhhcccccH
Confidence 34555566556655432 2334446667777777776641 11000000 011123345667
Q ss_pred CceeccCCcCcccc----ChhhhcCcc-cccccccCCccccc----CcccCCCC-CCCCEEeCCCCcccccC----Cccc
Q 046340 460 GGIDISENKLSGEI----PNSLGSCIR-LEELVMKGNFFQGN----IPSSFSSL-RGMQNLDLSRNNLSGRI----PKYF 525 (715)
Q Consensus 460 ~~L~Ls~n~l~~~~----~~~~~~l~~-L~~L~L~~n~l~~~----~~~~~~~l-~~L~~L~L~~N~l~~~~----~~~~ 525 (715)
++|.+++|.++... ...+...++ +.+|++..|++.+. ....+..+ ..++.++++.|+++... .+..
T Consensus 207 e~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l 286 (478)
T KOG4308|consen 207 ETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVL 286 (478)
T ss_pred HHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHH
Confidence 77777777765321 122333444 66677777777643 22334444 56778888888876553 3444
Q ss_pred cCCCCCCEEeCCCCcccc
Q 046340 526 ENFFFLQNLNLSSNHFEG 543 (715)
Q Consensus 526 ~~~~~L~~L~ls~N~l~~ 543 (715)
...+.++.+.+++|++..
T Consensus 287 ~~~~~l~~l~l~~n~l~~ 304 (478)
T KOG4308|consen 287 VSCRQLEELSLSNNPLTD 304 (478)
T ss_pred hhhHHHHHhhcccCcccc
Confidence 556678888888887753
No 473
>PRK12274 serine/threonine protein kinase; Provisional
Probab=93.72 E-value=0.17 Score=47.28 Aligned_cols=61 Identities=11% Similarity=0.022 Sum_probs=43.0
Q ss_pred ccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcc----hHHHHHHHHHHhcCC-CCCcceEEEE
Q 046340 649 SLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGA----SKSFMAQCQALRSVR-HRNLVKIITS 713 (715)
Q Consensus 649 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~----~~~~~~e~~~l~~~~-h~niv~l~g~ 713 (715)
.....+++|+||+||...- .+..++.+.+....... ..-|.+|+++|.+++ |+++++++++
T Consensus 5 ~~~~~l~~~~f~~v~~~~~----~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~ 70 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG----GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW 70 (218)
T ss_pred ccceeecCCCcceEEEeec----CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE
Confidence 3457899999999996653 22367777775443211 124789999999995 5789998875
No 474
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=93.70 E-value=0.033 Score=30.82 Aligned_cols=12 Identities=58% Similarity=0.836 Sum_probs=6.2
Q ss_pred CCEEeCCCCccc
Q 046340 507 MQNLDLSRNNLS 518 (715)
Q Consensus 507 L~~L~L~~N~l~ 518 (715)
|++|||++|+++
T Consensus 2 L~~Ldls~n~l~ 13 (22)
T PF00560_consen 2 LEYLDLSGNNLT 13 (22)
T ss_dssp ESEEEETSSEES
T ss_pred ccEEECCCCcCE
Confidence 445555555555
No 475
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=93.47 E-value=0.00057 Score=72.55 Aligned_cols=163 Identities=25% Similarity=0.248 Sum_probs=77.3
Q ss_pred ccCCCCCCEEEcCCceeeeecC----ccccCC-CCccEEEccCCcccccC----CccccCCCCCCeEeccCCccccc---
Q 046340 332 LRNLVNLELLHLGGNQFTGQIP----GSIGDL-HKLQWLMLPANEFWGEI----PSSIGNLTSLAILAFDENMLEGS--- 399 (715)
Q Consensus 332 ~~~l~~L~~L~L~~n~i~~~~~----~~~~~l-~~L~~L~L~~n~i~~~~----~~~~~~l~~L~~L~l~~n~i~~~--- 399 (715)
+....+|+.|++++|.+.+... ..+... ..|++|++..|.++... ...+.....++.+++..|.+...
T Consensus 111 l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~L~~~~~l~~l~l~~n~l~~~g~~ 190 (478)
T KOG4308|consen 111 LKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAVLEKNEHLTELDLSLNGLIELGLL 190 (478)
T ss_pred hcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHHHhcccchhHHHHHhcccchhhhH
Confidence 3444555566666665543211 111222 34455555555554322 22333456666666666665311
Q ss_pred -CCc----ccccCCCCCEEeCcCccccccc----CccccccccccceEEccCCcccccC----CcCCcCC-CCCCceecc
Q 046340 400 -IPS----SLGKCQNLILLDLSNNNLSGTI----PTEVIGLSSLSIYLDLSQNQLNGSL----PPNFGIL-KNLGGIDIS 465 (715)
Q Consensus 400 -~~~----~~~~~~~L~~L~L~~n~l~~~~----~~~~~~~~~l~~~L~Ls~n~i~~~~----~~~~~~l-~~L~~L~Ls 465 (715)
.+. .+....+++.|.+++|.++... ...+...+.....+++.+|.+.+.. ...+..+ ..+++++++
T Consensus 191 ~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~ 270 (478)
T KOG4308|consen 191 VLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLS 270 (478)
T ss_pred HHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhh
Confidence 111 2234567777777777765211 1112222332234666666665431 1233333 455666666
Q ss_pred CCcCccccC----hhhhcCcccccccccCCccc
Q 046340 466 ENKLSGEIP----NSLGSCIRLEELVMKGNFFQ 494 (715)
Q Consensus 466 ~n~l~~~~~----~~~~~l~~L~~L~L~~n~l~ 494 (715)
.|.+++... ..+..++.++++.+.+|.+.
T Consensus 271 ~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~ 303 (478)
T KOG4308|consen 271 RNSITEKGVRDLAEVLVSCRQLEELSLSNNPLT 303 (478)
T ss_pred cCCccccchHHHHHHHhhhHHHHHhhcccCccc
Confidence 666654322 23334455555555555554
No 476
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=93.30 E-value=0.073 Score=58.81 Aligned_cols=40 Identities=33% Similarity=0.493 Sum_probs=32.1
Q ss_pred hhcCCccccccCcCCCceEEEEEECCC--CceeEEEEEEeec
Q 046340 644 ATDGFSLENLIGAGSFGSVYKGILNHD--DHETLVAVKVLNL 683 (715)
Q Consensus 644 ~~~~f~~~~~lg~g~~g~vy~~~~~~~--~~~~~~avk~l~~ 683 (715)
..++|...+.||+|+||.||+|+..++ ..+..||||++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~ 171 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATE 171 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecc
Confidence 567899999999999999999998654 0133899999853
No 477
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=92.92 E-value=0.002 Score=58.96 Aligned_cols=84 Identities=19% Similarity=0.165 Sum_probs=35.4
Q ss_pred cCCCCCcEEecCCCcCcccCCccccCCCCCCEEEccCCcCccCccccccCCCCCCEEEeeccccccccCccccCCCCCCE
Q 046340 61 GYLFRLQILALHNNTFGGQIPDNISHCVNLESLGLGVNELVGKVPGKLGSLSKLWILSVHYNSLSGEIPSSFGNLSSLEF 140 (715)
Q Consensus 61 ~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 140 (715)
..+...+.||++.|++. ..-..|.-++.|..|+++.|.+. ..|..+.....+..+++..|..+ ..|.++...+.++.
T Consensus 39 ~~~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~k~ 115 (326)
T KOG0473|consen 39 ASFKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHPKK 115 (326)
T ss_pred hccceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCcch
Confidence 33344444444444333 11222333333444444444443 33444444444444444444444 34444444445544
Q ss_pred EEcccCc
Q 046340 141 LSAAANQ 147 (715)
Q Consensus 141 L~l~~n~ 147 (715)
+++..+.
T Consensus 116 ~e~k~~~ 122 (326)
T KOG0473|consen 116 NEQKKTE 122 (326)
T ss_pred hhhccCc
Confidence 4444443
No 478
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=92.76 E-value=0.17 Score=47.47 Aligned_cols=53 Identities=15% Similarity=0.157 Sum_probs=31.7
Q ss_pred ccCcCCCceEEEEEECCCCceeEEEEEEeeccCCc-------chHHHHHHHHHHhcCCCCCcc
Q 046340 653 LIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRG-------ASKSFMAQCQALRSVRHRNLV 708 (715)
Q Consensus 653 ~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~-------~~~~~~~e~~~l~~~~h~niv 708 (715)
.||+|+||.||+|.+.+. . ..+.+ ........ ..+.+.+|++++..++|+++.
T Consensus 1 ~ig~G~~~~vy~~~~~~~-~-~viK~-~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 60 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFLGL-K-AVIKE-RVPKSYRHPELDERIRRERTRNEARLLSRARKAGVN 60 (199)
T ss_pred CCCCCceEEEEEeecCCc-c-EEEEE-ecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 379999999999996443 1 00000 01111011 124577899999999888654
No 479
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=92.65 E-value=0.016 Score=54.39 Aligned_cols=60 Identities=22% Similarity=0.449 Sum_probs=47.4
Q ss_pred cccCcCCCceEEEEEECCCCceeEEEEEEeec--cCCcchHHHHHHHHHHhcCCCCCcceEEEEeC
Q 046340 652 NLIGAGSFGSVYKGILNHDDHETLVAVKVLNL--QHRGASKSFMAQCQALRSVRHRNLVKIITSCA 715 (715)
Q Consensus 652 ~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~--~~~~~~~~~~~e~~~l~~~~h~niv~l~g~~~ 715 (715)
-++.+..-|+.|+|+|++. -+++|++.. ......++|..|...++-..||||...+|+|.
T Consensus 196 tkl~e~hsgelwrgrwqgn----divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacn 257 (448)
T KOG0195|consen 196 TKLAESHSGELWRGRWQGN----DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACN 257 (448)
T ss_pred hhhccCCCcccccccccCc----chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhcc
Confidence 4577888899999999877 366677643 22333578999999999999999999999983
No 480
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=92.54 E-value=0.23 Score=50.84 Aligned_cols=65 Identities=20% Similarity=0.319 Sum_probs=45.8
Q ss_pred CCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCC----CCcceEEE
Q 046340 647 GFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRH----RNLVKIIT 712 (715)
Q Consensus 647 ~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h----~niv~l~g 712 (715)
.|...+.||+|+||.||.+.-.... ...+|+|.-..........+..|+.++..+.+ +++.+++.
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~-~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~ 87 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEK-NKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLD 87 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCC-CeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEE
Confidence 6888899999999999999954432 23688888765433322367788888887763 45666554
No 481
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=91.72 E-value=0.16 Score=29.35 Aligned_cols=21 Identities=38% Similarity=0.464 Sum_probs=11.9
Q ss_pred CCCCEEeCCCCCCCccCChhh
Q 046340 40 SFLRVLDLKNNSFRDEIPQEI 60 (715)
Q Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~ 60 (715)
++|++|+|++|.|+.+.++.|
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00369 2 PNLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHc
Confidence 456666666666665544444
No 482
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=91.72 E-value=0.16 Score=29.35 Aligned_cols=21 Identities=38% Similarity=0.464 Sum_probs=11.9
Q ss_pred CCCCEEeCCCCCCCccCChhh
Q 046340 40 SFLRVLDLKNNSFRDEIPQEI 60 (715)
Q Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~ 60 (715)
++|++|+|++|.|+.+.++.|
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00370 2 PNLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHc
Confidence 456666666666665544444
No 483
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=91.62 E-value=0.0072 Score=55.52 Aligned_cols=88 Identities=20% Similarity=0.226 Sum_probs=66.6
Q ss_pred CCcCCCCCCceeccCCcCccccChhhhcCcccccccccCCcccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCC
Q 046340 452 NFGILKNLGGIDISENKLSGEIPNSLGSCIRLEELVMKGNFFQGNIPSSFSSLRGMQNLDLSRNNLSGRIPKYFENFFFL 531 (715)
Q Consensus 452 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L 531 (715)
.+......+.||++.|++. ....-|+-++.|..|+++.|++. ..|..+.++..+..+++.+|..+ ..|.++...+.+
T Consensus 37 ei~~~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~ 113 (326)
T KOG0473|consen 37 EIASFKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHP 113 (326)
T ss_pred hhhccceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCc
Confidence 3445566777888888876 34455777788888888888887 66777888888888888888776 456788888888
Q ss_pred CEEeCCCCccc
Q 046340 532 QNLNLSSNHFE 542 (715)
Q Consensus 532 ~~L~ls~N~l~ 542 (715)
+++++-.|++.
T Consensus 114 k~~e~k~~~~~ 124 (326)
T KOG0473|consen 114 KKNEQKKTEFF 124 (326)
T ss_pred chhhhccCcch
Confidence 88888888764
No 484
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=91.50 E-value=0.085 Score=55.94 Aligned_cols=67 Identities=24% Similarity=0.252 Sum_probs=53.4
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcCCCCCcceEEEE
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSVRHRNLVKIITS 713 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~~h~niv~l~g~ 713 (715)
..-|...+.||-|+||+|..++-.++ ...+|+|.++... +.+...+..|-.||+.-+.+.||+||..
T Consensus 628 KSmFvkik~iGvGAFGeV~Lv~KvDT--~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS 697 (1034)
T KOG0608|consen 628 KSMFVKIKTIGVGAFGEVCLVRKVDT--RALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS 697 (1034)
T ss_pred ccceEEEeeecccccceeEEEeecch--hhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE
Confidence 44577888999999999999986555 3489999997542 3445567789999999999999999854
No 485
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=91.41 E-value=0.15 Score=29.56 Aligned_cols=22 Identities=41% Similarity=0.594 Sum_probs=14.0
Q ss_pred CCCCEEeCCCCcccccCCcccc
Q 046340 505 RGMQNLDLSRNNLSGRIPKYFE 526 (715)
Q Consensus 505 ~~L~~L~L~~N~l~~~~~~~~~ 526 (715)
++|+.|+|++|.++.++++.|.
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00370 2 PNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHcc
Confidence 4566777777777666555554
No 486
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=91.41 E-value=0.15 Score=29.56 Aligned_cols=22 Identities=41% Similarity=0.594 Sum_probs=14.0
Q ss_pred CCCCEEeCCCCcccccCCcccc
Q 046340 505 RGMQNLDLSRNNLSGRIPKYFE 526 (715)
Q Consensus 505 ~~L~~L~L~~N~l~~~~~~~~~ 526 (715)
++|+.|+|++|.++.++++.|.
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00369 2 PNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHcc
Confidence 4566777777777666555554
No 487
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=91.21 E-value=0.29 Score=52.11 Aligned_cols=48 Identities=31% Similarity=0.302 Sum_probs=34.5
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHh
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALR 700 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~ 700 (715)
..|+ .+.+|.|++|.||+|++.++ . .||||..++.. .+.+..++.++.
T Consensus 118 ~~fd-~~plasaSigQVh~A~l~~G-~--~VaVKv~rp~i---~~~i~~Dl~~l~ 165 (437)
T TIGR01982 118 AEFE-EKPLAAASIAQVHRARLVDG-K--EVAVKVLRPGI---EKTIAADIALLY 165 (437)
T ss_pred hhCC-CcceeeeehhheEEEEecCC-C--EEEEEeeCCCc---HHHHHHHHHHHH
Confidence 3444 36799999999999999766 3 79999997553 334555555544
No 488
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=91.01 E-value=0.11 Score=55.30 Aligned_cols=64 Identities=23% Similarity=0.281 Sum_probs=49.8
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcC-CCCCcceEEEEe
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSV-RHRNLVKIITSC 714 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~g~~ 714 (715)
+..|.....+|.|+|+.|-++....+++ ..|||++... ..+..+|+.++... +|||||++.+.|
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~--~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~ 385 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQ--EPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVY 385 (612)
T ss_pred chhhccccccCCCCccceeeeecccccc--chhheecccc----ccccccccchhhhhcCCCcceeeccee
Confidence 3445555679999999999999876654 7899999754 23467788787766 899999998876
No 489
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=90.88 E-value=0.31 Score=50.27 Aligned_cols=65 Identities=18% Similarity=0.387 Sum_probs=48.0
Q ss_pred cCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCC-----CC---CcceEEEE
Q 046340 646 DGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVR-----HR---NLVKIITS 713 (715)
Q Consensus 646 ~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~-----h~---niv~l~g~ 713 (715)
+.|...++||=|-|++||.+. +....+.||+|+.+.. ....+....||+++.+++ |+ .||+|+.+
T Consensus 78 gRY~v~rKLGWGHFSTVWLaw--Dtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~ 150 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAW--DTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDH 150 (590)
T ss_pred ceEEEEEeccccccceeEEEe--eccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecc
Confidence 456677899999999999997 3333458999999633 334566789999998763 33 68887754
No 490
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=90.85 E-value=0.65 Score=41.63 Aligned_cols=52 Identities=19% Similarity=0.252 Sum_probs=40.9
Q ss_pred ccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCCCCcc
Q 046340 651 ENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRHRNLV 708 (715)
Q Consensus 651 ~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h~niv 708 (715)
...||+|.+|.||.|.|.+. .+|+|.-+..++ ...+..|++++..+....+-
T Consensus 27 ~~~L~KG~~s~Vyl~~~~~~----~~a~Kvrr~ds~--r~~l~kEakiLeil~g~~~~ 78 (201)
T COG2112 27 EKELAKGTTSVVYLGEWRGG----EVALKVRRRDSP--RRNLEKEAKILEILAGEGVT 78 (201)
T ss_pred hhhhhcccccEEEEeeccCc----eEEEEEecCCcc--hhhHHHHHHHHHHhhhcCCC
Confidence 46799999999999999776 789999876543 35688999988877655543
No 491
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=90.76 E-value=0.16 Score=48.25 Aligned_cols=64 Identities=13% Similarity=0.316 Sum_probs=48.2
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcC-CCCCcceEE
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSV-RHRNLVKII 711 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~-~h~niv~l~ 711 (715)
...|.+.+.+|+|.||.+-.++++..++ .+++|..+.... ..++|.+|.----.+ .|.||+.-|
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t--~ivlKavp~p~t-t~~dF~rEfhY~~~Ls~H~hIi~tY 87 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKT--RIVLKAVPRPQT-TQADFVREFHYSFFLSPHQHIIDTY 87 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCce--EEEeeccCcchh-hHHHHHHHhccceeeccchhhhHHH
Confidence 3457788999999999999999887766 899999964322 247899987665555 577887533
No 492
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=90.50 E-value=0.17 Score=25.90 Aligned_cols=13 Identities=54% Similarity=0.708 Sum_probs=5.4
Q ss_pred CCCEEeCCCCCCC
Q 046340 41 FLRVLDLKNNSFR 53 (715)
Q Consensus 41 ~L~~L~Ls~n~i~ 53 (715)
+|+.|+|++|+++
T Consensus 2 ~L~~L~l~~n~L~ 14 (17)
T PF13504_consen 2 NLRTLDLSNNRLT 14 (17)
T ss_dssp T-SEEEETSS--S
T ss_pred ccCEEECCCCCCC
Confidence 4555555555544
No 493
>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]
Probab=90.43 E-value=0.26 Score=54.10 Aligned_cols=30 Identities=30% Similarity=0.498 Sum_probs=26.7
Q ss_pred chHHHHHHhhcCCccccccCcCCCceEEEEE
Q 046340 636 VSYQNLIKATDGFSLENLIGAGSFGSVYKGI 666 (715)
Q Consensus 636 ~~~~~~~~~~~~f~~~~~lg~g~~g~vy~~~ 666 (715)
+-.++|+.+.+ ....+.+|+|+||+||.|.
T Consensus 985 yv~deWe~~r~-it~~relg~gsfg~Vy~g~ 1014 (1025)
T KOG4258|consen 985 YVPDEWEVSRE-ITLGRELGQGSFGMVYEGN 1014 (1025)
T ss_pred CChhHHHHHHH-HhhhhhhccCccceEEEec
Confidence 66789988877 7888999999999999997
No 494
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=90.43 E-value=0.43 Score=51.82 Aligned_cols=37 Identities=27% Similarity=0.328 Sum_probs=29.8
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeecc
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQ 684 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~ 684 (715)
...|+. +.+|+|++|.||+|++.++ |..||||.+++.
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~--G~~VAVKV~rP~ 155 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDN--GREVVVKVLRPD 155 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCC--CCEEEEEEeCcc
Confidence 445666 7899999999999999763 238999999755
No 495
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=90.13 E-value=0.13 Score=43.46 Aligned_cols=48 Identities=25% Similarity=0.277 Sum_probs=34.0
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHH
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQAL 699 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l 699 (715)
...|+ .+.+|.|+.|.||+|++.++. .||||..++.-. +.+..++.+|
T Consensus 11 F~~fd-~~PlasASiaQVh~a~l~~g~---~VaVKV~rP~i~---~~i~~Dl~~l 58 (119)
T PF03109_consen 11 FDEFD-PEPLASASIAQVHRARLKDGE---EVAVKVQRPGIE---EQIEADLRIL 58 (119)
T ss_pred HHHCC-cchhhheehhhheeeeecccc---hhhhhhcchHHH---HHHHHHHHHH
Confidence 34555 378999999999999998752 799999976532 3344444444
No 496
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.08 E-value=0.039 Score=49.95 Aligned_cols=81 Identities=17% Similarity=0.107 Sum_probs=57.2
Q ss_pred CCCEEeCCCCCCCccCChhhcCCCCCcEEecCCCcCcc-cCCcccc-CCCCCCEEEccCC-cCccCccccccCCCCCCEE
Q 046340 41 FLRVLDLKNNSFRDEIPQEIGYLFRLQILALHNNTFGG-QIPDNIS-HCVNLESLGLGVN-ELVGKVPGKLGSLSKLWIL 117 (715)
Q Consensus 41 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~-~~~~~~~-~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L 117 (715)
.++.+|-+++.|..+--+.+..++.++.|.+.+|.--+ ...+.++ -.++|+.|++++| +|++..-..+.++++|+.|
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~L 181 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNLRRL 181 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHHHhhhhHHH
Confidence 45788888888876655667778888888888774321 1112222 3478999999988 5776666677888899988
Q ss_pred Eeec
Q 046340 118 SVHY 121 (715)
Q Consensus 118 ~Ls~ 121 (715)
.+.+
T Consensus 182 ~l~~ 185 (221)
T KOG3864|consen 182 HLYD 185 (221)
T ss_pred HhcC
Confidence 8765
No 497
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=89.80 E-value=0.78 Score=46.81 Aligned_cols=62 Identities=34% Similarity=0.512 Sum_probs=49.3
Q ss_pred CccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCc---chHHHHHHHHHHhcCCCC-CcceEEEEe
Q 046340 648 FSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRG---ASKSFMAQCQALRSVRHR-NLVKIITSC 714 (715)
Q Consensus 648 f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~---~~~~~~~e~~~l~~~~h~-niv~l~g~~ 714 (715)
|.....+|.|+||.||++... ..+|+|.+...... ....|.+|+.+++.+.|+ ++++++.+.
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~ 67 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR-----KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFF 67 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec-----cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEE
Confidence 445578999999999999975 27899999754332 356799999999999988 799987753
No 498
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.36 E-value=0.04 Score=49.86 Aligned_cols=80 Identities=13% Similarity=0.094 Sum_probs=43.6
Q ss_pred CCcEEecCCCcCcccCCccccCCCCCCEEEccCCcCccCcc-ccc-cCCCCCCEEEeeccc-cccccCccccCCCCCCEE
Q 046340 65 RLQILALHNNTFGGQIPDNISHCVNLESLGLGVNELVGKVP-GKL-GSLSKLWILSVHYNS-LSGEIPSSFGNLSSLEFL 141 (715)
Q Consensus 65 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~-~~l~~L~~L~Ls~n~-l~~~~~~~~~~l~~L~~L 141 (715)
.++.+|-++..|.....+.+.+++.++.|.+.+|.-.+... +-+ +-.++|+.|++++|. ||...-..+..+++|+.|
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~L 181 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNLRRL 181 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHHHhhhhHHH
Confidence 35667777777776666667777777777777664321110 111 123566666666554 443333344555555555
Q ss_pred Ecc
Q 046340 142 SAA 144 (715)
Q Consensus 142 ~l~ 144 (715)
.+.
T Consensus 182 ~l~ 184 (221)
T KOG3864|consen 182 HLY 184 (221)
T ss_pred Hhc
Confidence 544
No 499
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=88.32 E-value=0.66 Score=43.40 Aligned_cols=57 Identities=25% Similarity=0.424 Sum_probs=40.1
Q ss_pred hhcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccCCcchHHHHHHHHHHhcCCC
Q 046340 644 ATDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQHRGASKSFMAQCQALRSVRH 704 (715)
Q Consensus 644 ~~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~~~~~~~~~~e~~~l~~~~h 704 (715)
..+.|...+.||.|+||-+|.|..-... ..||+|.=....+. .+...|.++-.-++|
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~g--e~VAiK~Es~~a~h--pqL~yEskvY~iL~~ 69 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSG--EEVAIKLESSKAKH--PQLLYESKVYRILQG 69 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCC--ceEEEEeecccCCC--cchhHHHHHHHHhcc
Confidence 3467788899999999999999965443 38999987544332 345667766655543
No 500
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=87.17 E-value=0.13 Score=51.51 Aligned_cols=65 Identities=25% Similarity=0.338 Sum_probs=44.5
Q ss_pred hcCCccccccCcCCCceEEEEEECCCCceeEEEEEEeeccC---CcchHHHHHHHHHHhcC-CCCCcceEE
Q 046340 645 TDGFSLENLIGAGSFGSVYKGILNHDDHETLVAVKVLNLQH---RGASKSFMAQCQALRSV-RHRNLVKII 711 (715)
Q Consensus 645 ~~~f~~~~~lg~g~~g~vy~~~~~~~~~~~~~avk~l~~~~---~~~~~~~~~e~~~l~~~-~h~niv~l~ 711 (715)
..+|....+||+|+||+|..|.-++++. .+|||+++..- ..+.+.-..|-++++-. +.|.+|.+.
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdE--LyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlH 416 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDE--LYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLH 416 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcch--hhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHH
Confidence 4578888999999999999998776655 89999997542 12223334566676644 455555443
Done!