Your job contains 1 sequence.
>046343
SSGSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHSSTSKMVVTPVSTAMTTAKWLRT
IICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSLFH
RCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNS
LEERLLESMVWEKGSSMYNSLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPT
DSPTRQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSP
VCSIFNFQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLYPTRS
NPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTS
LFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVFDHVDIITFYN
KIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPL
RTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNRRVRGALNFDDVDVDVG
LVSDSMVVNSLYLQNGSAAASTCAVLKPEQLDP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 046343
(633 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q66WV0 - symbol:RBR1 "Retinoblastoma-related pr... 917 1.5e-173 3
TAIR|locus:2082194 - symbol:RBR1 "retinoblastoma-related ... 651 3.7e-140 3
UNIPROTKB|E1BQ59 - symbol:RBL1 "Uncharacterized protein" ... 225 5.9e-32 3
UNIPROTKB|P28749 - symbol:RBL1 "Retinoblastoma-like prote... 213 1.1e-29 3
UNIPROTKB|E2RQ78 - symbol:RBL1 "Uncharacterized protein" ... 205 2.7e-29 3
UNIPROTKB|F1PBK3 - symbol:RBL1 "Uncharacterized protein" ... 205 2.7e-29 3
RGD|1595511 - symbol:Rbl1 "retinoblastoma-like 1 (p107)" ... 209 3.1e-29 3
MGI|MGI:103300 - symbol:Rbl1 "retinoblastoma-like 1 (p107... 200 4.6e-29 3
UNIPROTKB|E1BMR3 - symbol:RBL1 "Uncharacterized protein" ... 201 9.4e-29 3
ZFIN|ZDB-GENE-030131-8179 - symbol:rbl1 "retinoblastoma-l... 210 1.6e-28 3
UNIPROTKB|F1SEM0 - symbol:RBL1 "Uncharacterized protein" ... 201 2.4e-28 3
UNIPROTKB|H9KZ75 - symbol:RBL2 "Uncharacterized protein" ... 190 1.7e-25 3
UNIPROTKB|H9L1Q3 - symbol:RBL2 "Uncharacterized protein" ... 190 1.8e-25 3
UNIPROTKB|Q9BDQ3 - symbol:RB1 "Retinoblastoma protein 1" ... 184 3.4e-24 3
UNIPROTKB|P06400 - symbol:RB1 "Retinoblastoma-associated ... 184 4.1e-24 3
UNIPROTKB|A5D7M0 - symbol:RBL2 "Uncharacterized protein" ... 168 4.3e-24 4
UNIPROTKB|E1BZL8 - symbol:RB1 "Retinoblastoma-associated ... 184 7.5e-24 3
UNIPROTKB|E1C0H8 - symbol:RB1 "Retinoblastoma-associated ... 184 7.7e-24 3
UNIPROTKB|Q90600 - symbol:RB1 "Retinoblastoma-associated ... 184 8.1e-24 3
UNIPROTKB|F1RK14 - symbol:RB1 "Uncharacterized protein" s... 187 8.3e-24 3
MGI|MGI:105085 - symbol:Rbl2 "retinoblastoma-like 2" spec... 165 8.9e-24 4
UNIPROTKB|F1NAY1 - symbol:RB1 "Retinoblastoma-associated ... 184 9.7e-24 3
UNIPROTKB|F1NV90 - symbol:RB1 "Retinoblastoma-associated ... 184 1.4e-23 3
UNIPROTKB|F1NAY3 - symbol:RB1 "Retinoblastoma-associated ... 184 1.7e-23 3
RGD|3541 - symbol:Rbl2 "retinoblastoma-like 2" species:10... 159 2.0e-23 4
UNIPROTKB|O55081 - symbol:Rbl2 "Retinoblastoma-like prote... 159 2.0e-23 4
UNIPROTKB|Q08999 - symbol:RBL2 "Retinoblastoma-like prote... 164 2.4e-23 4
UNIPROTKB|J9NU49 - symbol:RB1 "Uncharacterized protein" s... 182 2.8e-23 3
RGD|3540 - symbol:Rb1 "retinoblastoma 1" species:10116 "R... 178 4.7e-23 3
MGI|MGI:97874 - symbol:Rb1 "retinoblastoma 1" species:100... 180 5.9e-23 3
UNIPROTKB|F1MD46 - symbol:RB1 "Uncharacterized protein" s... 179 9.9e-23 3
UNIPROTKB|F1PQ32 - symbol:RB1 "Uncharacterized protein" s... 176 1.3e-22 3
UNIPROTKB|E2RIG3 - symbol:RBL2 "Uncharacterized protein" ... 162 5.7e-22 3
FB|FBgn0015799 - symbol:Rbf "Retinoblastoma-family protei... 181 3.5e-21 2
ZFIN|ZDB-GENE-040428-1 - symbol:rb1 "retinoblastoma 1" sp... 178 3.1e-20 4
FB|FBgn0038390 - symbol:Rbf2 "Retinoblastoma-family prote... 143 6.9e-14 2
UNIPROTKB|F1NEZ1 - symbol:F1NEZ1 "Uncharacterized protein... 190 1.7e-13 3
DICTYBASE|DDB_G0290551 - symbol:rblA "retinoblastoma-like... 124 1.1e-11 4
UNIPROTKB|I3LUP8 - symbol:RBL2 "Uncharacterized protein" ... 160 1.1e-11 2
UNIPROTKB|B7Z913 - symbol:RBL2 "cDNA FLJ53278, highly sim... 163 6.3e-11 3
UNIPROTKB|F5H837 - symbol:RBL2 "Retinoblastoma-like prote... 163 3.6e-09 2
WB|WBGene00003020 - symbol:lin-35 species:6239 "Caenorhab... 120 1.3e-07 3
UNIPROTKB|G5EDT1 - symbol:lin-35 "Synthetic multivulva pr... 120 1.3e-07 3
>UNIPROTKB|Q66WV0 [details] [associations]
symbol:RBR1 "Retinoblastoma-related protein 1" species:4100
"Nicotiana benthamiana" [GO:0032875 "regulation of DNA
endoreduplication" evidence=IMP] [GO:0051782 "negative regulation
of cell division" evidence=IMP] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0007049 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0051782
GO:GO:0032875 InterPro:IPR024599 Pfam:PF11934 HSSP:P06400
EMBL:AY699399 ProteinModelPortal:Q66WV0 Uniprot:Q66WV0
Length = 1003
Score = 917 (327.9 bits), Expect = 1.5e-173, Sum P(3) = 1.5e-173
Identities = 220/396 (55%), Positives = 247/396 (62%)
Query: 260 EVDSIFLLI-PMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELV 318
E++ + LL PMPSLDAIAMHIN SSG L P+ SLHK+ +P I + + + V
Sbjct: 617 EINRMGLLAEPMPSLDAIAMHINLSSGSLPPLPSLHKNNLAPNGQIGDIRS-----PKKV 671
Query: 319 TDDYRSVLVERNNFTSLVKDCXXXXXXXXX-----XXXXXXXXXXXXXXGGGGEPCAETG 373
+YRSVLVERN+FTS VKD GGGGE CAET
Sbjct: 672 CSEYRSVLVERNSFTSPVKDRFLALNNIKSKFPPPALHSAFASPTRPNPGGGGETCAETA 731
Query: 374 INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILC 433
IN+ F KI KLAAVRIN M+ERLQLSQQIRE+VYCL K L+QRTSLFFN HIDQIILC
Sbjct: 732 INVFFGKIVKLAAVRINGMIERLQLSQQIRETVYCLFQK-ILSQRTSLFFNRHIDQIILC 790
Query: 434 CFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DHVDIITFY 479
FYGVAKISQLNLTFKEII NY KQPQCKPQVFRSVF DHVDIITFY
Sbjct: 791 SFYGVAKISQLNLTFKEIICNYRKQPQCKPQVFRSVFVDWTLARHNVRTGADHVDIITFY 850
Query: 480 NKIFAPTVKPLLVELGPVGTAMKTN--RDSEVNHNNDASVFPALPDMSPKKVSATHSVYV 537
N++F P+VKPLLVEL P G + N D + + S FP LPDMSPKKVSA H+VYV
Sbjct: 851 NEMFIPSVKPLLVELAPAGNNSEKNDHNDGQGPASPKPSPFPKLPDMSPKKVSAVHNVYV 910
Query: 538 SPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNRRVRGALNFXXXXX 597
SPLR S+MDALISHSSKSYYACVGESTHAY D+ N R+ G
Sbjct: 911 SPLRASKMDALISHSSKSYYACVGESTHAYQSPSKDLDV-----INNRLNGNRKLRGALN 965
Query: 598 XXXXX---XXXXXXNSLYLQNGSAAASTCAVLKPEQ 630
NSLYLQNG+ S A +K EQ
Sbjct: 966 FDVDAGLVSDSIVANSLYLQNGNCR-SPVAHVKTEQ 1000
Score = 599 (215.9 bits), Expect = 1.5e-173, Sum P(3) = 1.5e-173
Identities = 121/146 (82%), Positives = 132/146 (90%)
Query: 73 LQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACS 127
LQ +LMDNIWAEQRR EALKL Y+VL+TMCTAE+Q+L+ NLTSL FHRCMLACS
Sbjct: 474 LQSTSLMDNIWAEQRRSEALKLYYRVLQTMCTAESQILNGNNLTSLLTNERFHRCMLACS 533
Query: 128 AELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLE 187
AELVLATHKTVTMLF AVLER GITAF+LSKVI+SFIRHEESLPRELRRHLNSLEERLLE
Sbjct: 534 AELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLE 593
Query: 188 SMVWEKGSSMYNSLTVARPALSAEIN 213
SMVWEKGSSMYNSL VA+P+L+AEIN
Sbjct: 594 SMVWEKGSSMYNSLAVAKPSLAAEIN 619
Score = 208 (78.3 bits), Expect = 1.5e-173, Sum P(3) = 1.5e-173
Identities = 44/77 (57%), Positives = 52/77 (67%)
Query: 2 SGSLFGGAVNITGAKRKFDSLASPVKTIXXXXXXXXX---XXXKMVV-TPVSTAMTTAKW 57
SGSL GGAVN+ G KRKFD++ASP KT+ KM TPVSTAMTTA+W
Sbjct: 357 SGSLSGGAVNMNGTKRKFDAMASPAKTVTSTLSPYRSPNCANSKMTAATPVSTAMTTARW 416
Query: 58 LRTIICPLPSKPSADLQ 74
LRT+I PL KPSA+L+
Sbjct: 417 LRTVIAPLQPKPSAELE 433
>TAIR|locus:2082194 [details] [associations]
symbol:RBR1 "retinoblastoma-related 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0051726 "regulation of cell cycle" evidence=IMP] [GO:0051783
"regulation of nuclear division" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010090 "trichome morphogenesis"
evidence=RCA;IMP] [GO:0032875 "regulation of DNA endoreduplication"
evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0001558 "regulation of cell growth" evidence=IMP] [GO:2000036
"regulation of stem cell maintenance" evidence=IMP] [GO:0009553
"embryo sac development" evidence=IMP] [GO:0009567 "double
fertilization forming a zygote and endosperm" evidence=IEP]
[GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP;TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0009555 "pollen development" evidence=IMP] [GO:0022619
"generative cell differentiation" evidence=IMP] [GO:0001708 "cell
fate specification" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
[GO:0051302 "regulation of cell division" evidence=RCA] [GO:0008356
"asymmetric cell division" evidence=IGI] [GO:0008134 "transcription
factor binding" evidence=TAS] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0005829 GO:GO:0005634 GO:GO:0001708
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0019048 GO:GO:0010090
GO:GO:0006355 GO:GO:0001558 GO:GO:0003677 GO:GO:0000082
GO:GO:0006351 GO:GO:0048366 GO:GO:0009553 GO:GO:0008134
EMBL:AP002047 EMBL:AC069472 GO:GO:0006349 GO:GO:0008356
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0051783 GO:GO:0032875 GO:GO:0009567 GO:GO:2000036
eggNOG:NOG296920 KO:K04681 InterPro:IPR024599 Pfam:PF11934
EMBL:AF245395 EMBL:AY056293 EMBL:AY150438 IPI:IPI00541504
RefSeq:NP_566417.3 UniGene:At.14958 HSSP:P06400
ProteinModelPortal:Q9LKZ3 SMR:Q9LKZ3 DIP:DIP-33046N IntAct:Q9LKZ3
STRING:Q9LKZ3 PaxDb:Q9LKZ3 PRIDE:Q9LKZ3 EnsemblPlants:AT3G12280.1
GeneID:820408 KEGG:ath:AT3G12280 GeneFarm:3420 TAIR:At3g12280
HOGENOM:HOG000078660 InParanoid:Q9LHH8 OMA:FGERICT PhylomeDB:Q9LKZ3
ProtClustDB:CLSN2690882 Genevestigator:Q9LKZ3 GO:GO:0022619
Uniprot:Q9LKZ3
Length = 1013
Score = 651 (234.2 bits), Expect = 3.7e-140, Sum P(3) = 3.7e-140
Identities = 175/355 (49%), Positives = 205/355 (57%)
Query: 260 EVDSIFLLI-PMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELV 318
E++ + LL PMPSLDAIA INFS G + S+ KHET P L
Sbjct: 617 EINQLGLLAEPMPSLDAIAALINFSDGA-NHASSVQKHETCP-----GQNGGIRSPKRLC 670
Query: 319 TDDYRSVLVERNNFTSLVKDCXXXXXXXXXXXX-----XXXXXXXXXXXGGGGEPCAETG 373
TD YRS+LVERN+FTS VKD GGGGE CAETG
Sbjct: 671 TD-YRSILVERNSFTSPVKDRLLALGNVKSKMLPPPLQSAFASPTRPNPGGGGETCAETG 729
Query: 374 INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILC 433
INI F KINKLAAVRIN MVERLQLSQQIRESVYC + L QRTSL F+ HIDQIILC
Sbjct: 730 INIFFTKINKLAAVRINGMVERLQLSQQIRESVYCFF-QHVLAQRTSLLFSRHIDQIILC 788
Query: 434 CFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DHVDIITFY 479
CFYGVAKISQ++LTF+EIIYNY KQPQCKP VFRSV+ DHVDIITFY
Sbjct: 789 CFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVDALQCRRQGRIGPDHVDIITFY 848
Query: 480 NKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVY-VS 538
N+IF P VKPLLVELGPV + +R E N+ + P P KVS SV +S
Sbjct: 849 NEIFIPAVKPLLVELGPV----RNDRAVEANNKPEGQC-PGSP-----KVSVFPSVPDMS 898
Query: 539 PLRTSEM-DALISHSSKSYY-ACVGESTHAYSPFKDLTDINHRLNSNRRVRGALN 591
P + S + + +S S A + ST +Y + + + H S + A+N
Sbjct: 899 PKKVSAVHNVYVSPLRGSKMDALISHSTKSY--YACVGESTHAYQSPSKDLSAIN 951
Score = 590 (212.7 bits), Expect = 3.7e-140, Sum P(3) = 3.7e-140
Identities = 121/149 (81%), Positives = 131/149 (87%)
Query: 73 LQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACS 127
LQ +LMD+IWAEQRRLEA KL Y+VLE MC AEAQ+LHA NL SL FHRCMLACS
Sbjct: 474 LQAVDLMDDIWAEQRRLEACKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLACS 533
Query: 128 AELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLE 187
AELVLATHKT+TMLF AVLER GITAF+LSKVI+SFIRHE+SLPRELRRHLNSLEERLLE
Sbjct: 534 AELVLATHKTITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLEERLLE 593
Query: 188 SMVWEKGSSMYNSLTVARPALSAEIN-LG 215
SMVWEKGSSMYNSL VARP+L+ EIN LG
Sbjct: 594 SMVWEKGSSMYNSLIVARPSLALEINQLG 622
Score = 419 (152.6 bits), Expect = 4.3e-115, Sum P(3) = 4.3e-115
Identities = 109/210 (51%), Positives = 128/210 (60%)
Query: 436 YGVAKISQLN-LTFKEIIYNYGKQPQCKPQVFRSVFDHVDIITFYNKIFAPTVKPLLVEL 494
Y K Q L F+ + Y QC+ Q R DHVDIITFYN+IF P VKPLLVEL
Sbjct: 808 YNYRKQPQCKPLVFRSV---YVDALQCRRQG-RIGPDHVDIITFYNEIFIPAVKPLLVEL 863
Query: 495 GPVGT--AMKTNR--DSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRTSEMDALIS 550
GPV A++ N + + + SVFP++PDMSPKKVSA H+VYVSPLR S+MDALIS
Sbjct: 864 GPVRNDRAVEANNKPEGQCPGSPKVSVFPSVPDMSPKKVSAVHNVYVSPLRGSKMDALIS 923
Query: 551 HSSKSYYACVGESTHAY-SPFKDLTDINHRLN--SNRRVRGALNFXXXXXXXXXXXXXXX 607
HS+KSYYACVGESTHAY SP KDL+ IN+RLN S+ R R LNF
Sbjct: 924 HSTKSYYACVGESTHAYQSPSKDLSAINNRLNNSSSNRKR-TLNFDAEAGMVSDSMVANS 982
Query: 608 XN---SLYLQNGSAAAST--CAVLKPEQLD 632
N QNGS A+S+ A LK E D
Sbjct: 983 LNLQNQNQNQNGSDASSSGGAAPLKTEPTD 1012
Score = 183 (69.5 bits), Expect = 3.7e-140, Sum P(3) = 3.7e-140
Identities = 42/82 (51%), Positives = 48/82 (58%)
Query: 2 SGSLFGGAVNITGAKRKFDSLASPVKTIXX---------XXXXXXXXXXKMVVTPVSTAM 52
SGSL GAVNITG KRK D+L+SP +T K+ TPVSTAM
Sbjct: 353 SGSLSAGAVNITGVKRKIDALSSPARTFISPLSPHKSPAAKTNGISGATKLAATPVSTAM 412
Query: 53 TTAKWLRTIICPLPSKPSADLQ 74
TTAKWLRT+I PL KPS L+
Sbjct: 413 TTAKWLRTVISPLLPKPSPGLE 434
>UNIPROTKB|E1BQ59 [details] [associations]
symbol:RBL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0043550 "regulation of lipid kinase
activity" evidence=IEA] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0005667 GO:GO:0000122 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
OMA:RRDMQPL GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934
EMBL:AADN02019534 EMBL:AADN02019535 IPI:IPI00588682
Ensembl:ENSGALT00000002032 Uniprot:E1BQ59
Length = 1064
Score = 225 (84.3 bits), Expect = 5.9e-32, Sum P(3) = 5.9e-32
Identities = 53/160 (33%), Positives = 93/160 (58%)
Query: 47 PVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAE 106
P + + + + C ++P+ +L G+++ D +A R A L YK+LET+ E
Sbjct: 422 PAESIVNRVREIGETFCRSYTQPTDELPGSHI-D--FAVNRLKLAEILYYKILETIMVQE 478
Query: 107 AQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQ 161
+ LH K++T+L FHR ++AC E+VL + + F ++E + + F KVI+
Sbjct: 479 MRRLHGKDMTALLEQDVFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLDLRPFYFYKVIE 537
Query: 162 SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
IR EE L R++ +HLNS+EE++LES+ W + S+++ +L
Sbjct: 538 VLIRSEEGLSRDMVKHLNSIEEQILESLAWTRDSALWTAL 577
Score = 162 (62.1 bits), Expect = 5.9e-32, Sum P(3) = 5.9e-32
Identities = 34/105 (32%), Positives = 61/105 (58%)
Query: 365 GGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFN 424
G +P + + + K+ LA+VR+ + +L +S +R ++ C + TL L +
Sbjct: 768 GNKPKKTGSLALFYRKVYHLASVRLRDLCLKLDVSNDLRRKIWT-CFEFTLVHCADLMKD 826
Query: 425 CHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV 469
H+DQ++LC FY +AK+++ TF++I+ +Y QPQ V+RSV
Sbjct: 827 RHLDQLLLCAFYIMAKVTKEERTFQDIMKSYRNQPQANSHVYRSV 871
Score = 96 (38.9 bits), Expect = 5.9e-32, Sum P(3) = 5.9e-32
Identities = 34/109 (31%), Positives = 52/109 (47%)
Query: 474 DIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPD--MSPKKVSA 531
D+I FYN ++ VK ++ TN+D V S FP++ +SP+++S
Sbjct: 925 DLIKFYNAVYVGRVKSFALKYDI------TNQD-HVMEAPPLSPFPSIKQQPVSPRRISQ 977
Query: 532 THSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRL 580
HSVYVSP + A ++ + Y G SP K L DIN+ +
Sbjct: 978 QHSVYVSPHKNG---ACLTPRTALLYKFNG------SPSKSLKDINNMI 1017
Score = 49 (22.3 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPS 70
V+TPV++A + L+ I+ L + PS
Sbjct: 382 VITPVASATQSVSRLQNIVAGLKNAPS 408
>UNIPROTKB|P28749 [details] [associations]
symbol:RBL1 "Retinoblastoma-like protein 1" species:9606
"Homo sapiens" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0043550 "regulation of lipid kinase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0000080 "G1 phase of mitotic cell cycle" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=TAS] Reactome:REACT_71
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
EMBL:CH471077 Reactome:REACT_111102 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0045944 GO:GO:0016568
GO:GO:0005667 GO:GO:0000122 GO:GO:0051726 GO:GO:0007179
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0006367
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0000080 PDB:1H28 PDBsum:1H28 eggNOG:NOG296920 KO:K04681
InterPro:IPR024599 Pfam:PF11934 EMBL:L14812 EMBL:AK290380
EMBL:AL136172 EMBL:AL365505 EMBL:AL391114 EMBL:BC032247 EMBL:M74547
EMBL:S78664 IPI:IPI00005139 IPI:IPI00375494 PIR:A47319
RefSeq:NP_002886.2 RefSeq:NP_899662.1 UniGene:Hs.207745
ProteinModelPortal:P28749 SMR:P28749 DIP:DIP-148N IntAct:P28749
MINT:MINT-1353484 STRING:P28749 PhosphoSite:P28749 DMDM:90103515
PaxDb:P28749 PRIDE:P28749 DNASU:5933 Ensembl:ENST00000344359
Ensembl:ENST00000373664 GeneID:5933 KEGG:hsa:5933 UCSC:uc002xgi.3
UCSC:uc002xgj.1 CTD:5933 GeneCards:GC20M035624 H-InvDB:HIX0040570
HGNC:HGNC:9893 MIM:116957 neXtProt:NX_P28749 PharmGKB:PA34257
HOGENOM:HOG000273892 HOVERGEN:HBG017710 InParanoid:P28749
OMA:RRDMQPL OrthoDB:EOG4QZ7KB PhylomeDB:P28749
EvolutionaryTrace:P28749 GenomeRNAi:5933 NextBio:23126
ArrayExpress:P28749 Bgee:P28749 CleanEx:HS_RBL1
Genevestigator:P28749 GermOnline:ENSG00000080839 GO:GO:0043550
InterPro:IPR015030 Pfam:PF08934 Uniprot:P28749
Length = 1068
Score = 213 (80.0 bits), Expect = 1.1e-29, Sum P(3) = 1.1e-29
Identities = 56/166 (33%), Positives = 90/166 (54%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMC 103
V PV M K + C ++ S D Q + +D +A R A L YK+LET+
Sbjct: 420 VRNPVENIMKILKGIGETFCQHYTQ-STDEQPGSHID--FAVNRLKLAEILYYKILETVM 476
Query: 104 TAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSK 158
E + LH +++ L FHR ++AC E+VL + + F ++E + + F K
Sbjct: 477 VQETRRLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYK 535
Query: 159 VIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
VI+ IR EE L R++ +HLNS+EE++LES+ W S+++ +L V+
Sbjct: 536 VIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQVS 581
Score = 161 (61.7 bits), Expect = 1.1e-29, Sum P(3) = 1.1e-29
Identities = 35/99 (35%), Positives = 61/99 (61%)
Query: 372 TG-INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQI 430
TG + + + K+ LA+VR+ + +L +S ++R ++ C + TL L + H+DQ+
Sbjct: 785 TGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMKDRHLDQL 843
Query: 431 ILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV 469
+LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 844 LLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSV 882
Score = 88 (36.0 bits), Expect = 1.1e-29, Sum P(3) = 1.1e-29
Identities = 37/134 (27%), Positives = 56/134 (41%)
Query: 457 KQPQCKPQVFRSVFDHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA- 515
K P C + + D+I FYN I+ VK ++ N+D H DA
Sbjct: 914 KTPDCSSGPVKE--ERGDLIKFYNTIYVGRVKSFALKYD------LANQD----HMMDAP 961
Query: 516 --SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFK 571
S FP + SP+++S HS+Y+SP + ++ S Y G SP K
Sbjct: 962 PLSPFPHIKQQPGSPRRISQQHSIYISPHKNGSG---LTPRSALLYKFNG------SPSK 1012
Query: 572 DLTDINHRLNSNRR 585
L DIN+ + +
Sbjct: 1013 SLKDINNMIRQGEQ 1026
Score = 53 (23.7 bits), Expect = 7.4e-13, Sum P(3) = 7.4e-13
Identities = 17/61 (27%), Positives = 33/61 (54%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLE-ALKLNYKVLETM 102
V+TPV++A + L++I+ L + PS L N+ ++ + +E +K+ + ET
Sbjct: 383 VITPVASATQSVSRLQSIVAGLKNAPSDQL--INIFES--CVRNPVENIMKILKGIGETF 438
Query: 103 C 103
C
Sbjct: 439 C 439
Score = 41 (19.5 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 18/76 (23%), Positives = 37/76 (48%)
Query: 124 LACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEE-----SLPRELRRHL 178
+AC ++ K + L RI + + LS +IQ F + ++ +LP+E R +
Sbjct: 65 VACRKSIIPTVGKGIMEGNCVSLTRI-LRSAKLS-LIQFFSKMKKWMDMSNLPQEFRERI 122
Query: 179 NSLEERL-LESMVWEK 193
LE + +++++K
Sbjct: 123 ERLERNFEVSTVIFKK 138
>UNIPROTKB|E2RQ78 [details] [associations]
symbol:RBL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934
EMBL:AAEX03013918 Ensembl:ENSCAFT00000013845 NextBio:20852741
Uniprot:E2RQ78
Length = 1068
Score = 205 (77.2 bits), Expect = 2.7e-29, Sum P(3) = 2.7e-29
Identities = 53/160 (33%), Positives = 87/160 (54%)
Query: 47 PVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAE 106
P+ M K + C ++ S D Q + +D +A R A L YK+LET+ E
Sbjct: 423 PMENIMKIVKGIGETFCQHYTQ-STDEQPGSHID--FAINRLKLAEILYYKILETVMVQE 479
Query: 107 AQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQ 161
+ LH +++ L FHR ++AC E+VL + + F ++E + + F KVI+
Sbjct: 480 TRRLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLRPFYFYKVIE 538
Query: 162 SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
IR EE L R++ +HLNS+EE++LES+ W S+++ +L
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEAL 578
Score = 162 (62.1 bits), Expect = 2.7e-29, Sum P(3) = 2.7e-29
Identities = 35/106 (33%), Positives = 62/106 (58%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G +P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 778 GISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 836
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV 469
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 837 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSV 882
Score = 92 (37.4 bits), Expect = 2.7e-29, Sum P(3) = 2.7e-29
Identities = 36/131 (27%), Positives = 55/131 (41%)
Query: 457 KQPQCKPQVFRSVFDHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDAS 516
K P C + + D+I FYN I+ VK ++ +N+D V S
Sbjct: 914 KTPDCSSGPVKE--ERGDLIKFYNTIYVARVKSFALKYD------LSNQD-HVMEAPPLS 964
Query: 517 VFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLT 574
FP + SP+++S HS+YVSP + ++ S Y G SP K L
Sbjct: 965 PFPHIKQQPGSPRRISQQHSIYVSPHKNGSG---LTPRSALLYKFNG------SPSKSLK 1015
Query: 575 DINHRLNSNRR 585
DIN+ + +
Sbjct: 1016 DINNMIRQGEQ 1026
Score = 55 (24.4 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMC 103
V+TPV++A + L++I+ L + PS L N+ ++ +K+ + ET C
Sbjct: 383 VITPVASATQSVSRLQSIVAGLKNAPSEQL--INIFESCIRNPME-NIMKIVKGIGETFC 439
Score = 43 (20.2 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 26/110 (23%), Positives = 52/110 (47%)
Query: 90 EALKLNYKVLETMCTAEAQVLHAKNLTSLFHRCMLACSAELVLATHKTVTMLFLAVLERI 149
EAL ++ + + E +V+H SL+ +AC ++ K + L RI
Sbjct: 37 EALD-DFTAIRGNYSLEGEVIHWL-ACSLY----VACRKSIIPTVGKGIMEGNCVSLTRI 90
Query: 150 GITAFNLSKVIQSFIRHEE-----SLPRELRRHLNSLEERL-LESMVWEK 193
+ + LS +IQ F + ++ +LP+E R + LE + +++++K
Sbjct: 91 -LRSAKLS-LIQFFSKMKKWMDMSNLPQEFRERVERLERNFEVSTVIFKK 138
>UNIPROTKB|F1PBK3 [details] [associations]
symbol:RBL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
KO:K04681 InterPro:IPR024599 Pfam:PF11934 CTD:5933 OMA:RRDMQPL
InterPro:IPR015030 Pfam:PF08934 EMBL:AAEX03013918
RefSeq:XP_534412.2 ProteinModelPortal:F1PBK3
Ensembl:ENSCAFT00000013851 GeneID:477221 KEGG:cfa:477221
Uniprot:F1PBK3
Length = 1068
Score = 205 (77.2 bits), Expect = 2.7e-29, Sum P(3) = 2.7e-29
Identities = 53/160 (33%), Positives = 87/160 (54%)
Query: 47 PVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAE 106
P+ M K + C ++ S D Q + +D +A R A L YK+LET+ E
Sbjct: 423 PMENIMKIVKGIGETFCQHYTQ-STDEQPGSHID--FAINRLKLAEILYYKILETVMVQE 479
Query: 107 AQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQ 161
+ LH +++ L FHR ++AC E+VL + + F ++E + + F KVI+
Sbjct: 480 TRRLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLRPFYFYKVIE 538
Query: 162 SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
IR EE L R++ +HLNS+EE++LES+ W S+++ +L
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEAL 578
Score = 162 (62.1 bits), Expect = 2.7e-29, Sum P(3) = 2.7e-29
Identities = 35/106 (33%), Positives = 62/106 (58%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G +P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 778 GISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 836
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV 469
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 837 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSV 882
Score = 92 (37.4 bits), Expect = 2.7e-29, Sum P(3) = 2.7e-29
Identities = 36/131 (27%), Positives = 55/131 (41%)
Query: 457 KQPQCKPQVFRSVFDHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDAS 516
K P C + + D+I FYN I+ VK ++ +N+D V S
Sbjct: 914 KTPDCSSGPVKE--ERGDLIKFYNTIYVARVKSFALKYD------LSNQD-HVMEAPPLS 964
Query: 517 VFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLT 574
FP + SP+++S HS+YVSP + ++ S Y G SP K L
Sbjct: 965 PFPHIKQQPGSPRRISQQHSIYVSPHKNGSG---LTPRSALLYKFNG------SPSKSLK 1015
Query: 575 DINHRLNSNRR 585
DIN+ + +
Sbjct: 1016 DINNMIRQGEQ 1026
Score = 55 (24.4 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMC 103
V+TPV++A + L++I+ L + PS L N+ ++ +K+ + ET C
Sbjct: 383 VITPVASATQSVSRLQSIVAGLKNAPSEQL--INIFESCIRNPME-NIMKIVKGIGETFC 439
Score = 43 (20.2 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 26/110 (23%), Positives = 52/110 (47%)
Query: 90 EALKLNYKVLETMCTAEAQVLHAKNLTSLFHRCMLACSAELVLATHKTVTMLFLAVLERI 149
EAL ++ + + E +V+H SL+ +AC ++ K + L RI
Sbjct: 37 EALD-DFTAIRGNYSLEGEVIHWL-ACSLY----VACRKSIIPTVGKGIMEGNCVSLTRI 90
Query: 150 GITAFNLSKVIQSFIRHEE-----SLPRELRRHLNSLEERL-LESMVWEK 193
+ + LS +IQ F + ++ +LP+E R + LE + +++++K
Sbjct: 91 -LRSAKLS-LIQFFSKMKKWMDMSNLPQEFRERVERLERNFEVSTVIFKK 138
>RGD|1595511 [details] [associations]
symbol:Rbl1 "retinoblastoma-like 1 (p107)" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0043550 "regulation of lipid kinase activity"
evidence=ISO] [GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
RGD:1595511 GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 InterPro:IPR024599
Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934 IPI:IPI00357966
IntAct:D3ZS62 Ensembl:ENSRNOT00000009528 UCSC:RGD:1595511
Uniprot:D3ZS62
Length = 1063
Score = 209 (78.6 bits), Expect = 3.1e-29, Sum P(3) = 3.1e-29
Identities = 53/160 (33%), Positives = 88/160 (55%)
Query: 47 PVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAE 106
P+ + K + C ++ S D Q + +D +A R A L YK+LET+ E
Sbjct: 423 PMGNIVKIVKGIGETFCQHYTQ-STDKQPGSHID--FAVNRLKLAEILYYKILETIMVQE 479
Query: 107 AQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQ 161
+ LH +++ L FHR +LAC E+VL + + F +++ +G+ F KVI+
Sbjct: 480 TRRLHGMDMSVLLEQDIFHRSLLACCLEIVLFAYSS-PRTFPWIIDVLGLQPFYFYKVIE 538
Query: 162 SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
IR EE L R++ +HLNS+EE++LES+ W S+++ +L
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWTNNSALWEAL 578
Score = 162 (62.1 bits), Expect = 3.1e-29, Sum P(3) = 3.1e-29
Identities = 35/106 (33%), Positives = 62/106 (58%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G +P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 777 GISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 835
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV 469
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 836 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSV 881
Score = 87 (35.7 bits), Expect = 3.1e-29, Sum P(3) = 3.1e-29
Identities = 28/88 (31%), Positives = 43/88 (48%)
Query: 457 KQPQCKPQVFRSVFDHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA- 515
K P C + + + D+I FYN I+ VK A+K + ++ +H DA
Sbjct: 909 KTPNCSSEPVKE--ERGDLIKFYNAIYVGRVKSF---------ALKYDLSNQ-DHIMDAP 956
Query: 516 --SVFPALPDM--SPKKVSATHSVYVSP 539
S FP + SP+++S HS+YVSP
Sbjct: 957 PLSPFPHIKQQPGSPRRISQQHSIYVSP 984
Score = 53 (23.7 bits), Expect = 7.2e-13, Sum P(3) = 7.2e-13
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADL 73
V TPV++A + L++I+ L S PS L
Sbjct: 383 VTTPVASATQSVSRLQSIVAGLKSAPSEQL 412
Score = 45 (20.9 bits), Expect = 4.7e-12, Sum P(3) = 4.7e-12
Identities = 27/110 (24%), Positives = 52/110 (47%)
Query: 90 EALKLNYKVLETMCTAEAQVLHAKNLTSLFHRCMLACSAELVLATHKTVTMLFLAVLERI 149
EAL ++ + + E +V+H SL+ +AC ++ K V L RI
Sbjct: 37 EALD-DFTAIRGNYSLEGEVIHWL-ACSLY----VACRKSIIPTVGKGVMEGNCVSLTRI 90
Query: 150 GITAFNLSKVIQSFIRHEE-----SLPRELRRHLNSLEERL-LESMVWEK 193
+ + LS +IQ F + ++ +LP+E R + LE + +++++K
Sbjct: 91 -LRSAKLS-LIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKK 138
>MGI|MGI:103300 [details] [associations]
symbol:Rbl1 "retinoblastoma-like 1 (p107)" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0043550 "regulation of lipid kinase
activity" evidence=ISO] [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 MGI:MGI:103300 GO:GO:0006351 GO:GO:0016568
GO:GO:0005667 GO:GO:0000122 GO:GO:0007049 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
EMBL:AL669828 eggNOG:NOG296920 GeneTree:ENSGT00530000063235
KO:K04681 InterPro:IPR024599 Pfam:PF11934 CTD:5933
HOGENOM:HOG000273892 HOVERGEN:HBG017710 OMA:RRDMQPL
OrthoDB:EOG4QZ7KB GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934
EMBL:U33320 EMBL:U27177 EMBL:U27178 EMBL:AK156055 IPI:IPI00137864
IPI:IPI00352179 PIR:I49328 RefSeq:NP_001132988.1 RefSeq:NP_035379.2
UniGene:Mm.244671 ProteinModelPortal:Q64701 SMR:Q64701
IntAct:Q64701 STRING:Q64701 PhosphoSite:Q64701 PaxDb:Q64701
PRIDE:Q64701 Ensembl:ENSMUST00000029170 GeneID:19650 KEGG:mmu:19650
UCSC:uc008nos.2 InParanoid:Q3U1D4 NextBio:296908 Bgee:Q64701
CleanEx:MM_RBL1 Genevestigator:Q64701 GermOnline:ENSMUSG00000027641
Uniprot:Q64701
Length = 1063
Score = 200 (75.5 bits), Expect = 4.6e-29, Sum P(3) = 4.6e-29
Identities = 51/160 (31%), Positives = 87/160 (54%)
Query: 47 PVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAE 106
P+ + K + C ++ S D Q + +D +A R A L YK+LET+ E
Sbjct: 423 PMGNIIKIVKGIGETFCQHYTQ-STDKQPGSHID--FAVNRLKLAEILYYKILETIMVQE 479
Query: 107 AQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQ 161
+ LH +++ L FH+ ++AC E+VL + + F ++E + + F KVI+
Sbjct: 480 TRRLHGMDMSVLLEQDIFHKSLMACCLEIVLFAYSS-PRTFPWIIEVLDLQPFYFYKVIE 538
Query: 162 SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
IR EE L R++ +HLNS+EE++LES+ W S+++ +L
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWTNNSALWEAL 578
Score = 163 (62.4 bits), Expect = 4.6e-29, Sum P(3) = 4.6e-29
Identities = 35/106 (33%), Positives = 62/106 (58%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G +P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 777 GVSKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 835
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV 469
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 836 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSV 881
Score = 94 (38.1 bits), Expect = 4.6e-29, Sum P(3) = 4.6e-29
Identities = 38/134 (28%), Positives = 60/134 (44%)
Query: 457 KQPQCKPQVFRSVFDHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA- 515
K P C + + + D+I FYN ++ VK A+K + ++ +H DA
Sbjct: 909 KTPNCSSEPVKE--ERGDLIKFYNTVYVGRVKSF---------ALKYDLSNQ-DHIMDAP 956
Query: 516 --SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFK 571
S FP + SP+++S HS+YVSP + A ++ S Y G SP K
Sbjct: 957 PLSPFPHIKQQPGSPRRISQQHSLYVSPHKNG---AGLTPRSALLYKFNG------SPSK 1007
Query: 572 DLTDINHRLNSNRR 585
L DIN+ + +
Sbjct: 1008 SLKDINNMIRQGEQ 1021
Score = 55 (24.4 bits), Expect = 6.9e-14, Sum P(3) = 6.9e-14
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMC 103
V TPV++A + L++I+ L S PS L N+ ++ +K+ + ET C
Sbjct: 383 VTTPVASATQSVSRLQSIVAGLKSAPSEQL--LNIFESCMRNPMG-NIIKIVKGIGETFC 439
Score = 45 (20.9 bits), Expect = 7.2e-13, Sum P(3) = 7.2e-13
Identities = 27/110 (24%), Positives = 52/110 (47%)
Query: 90 EALKLNYKVLETMCTAEAQVLHAKNLTSLFHRCMLACSAELVLATHKTVTMLFLAVLERI 149
EAL ++ + + E +V+H SL+ +AC ++ K V L RI
Sbjct: 37 EALD-DFTAIRGNYSLEGEVIHWL-ACSLY----VACRKSIIPTVGKGVMEGNCVSLTRI 90
Query: 150 GITAFNLSKVIQSFIRHEE-----SLPRELRRHLNSLEERL-LESMVWEK 193
+ + LS +IQ F + ++ +LP+E R + LE + +++++K
Sbjct: 91 -LRSAKLS-LIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKK 138
>UNIPROTKB|E1BMR3 [details] [associations]
symbol:RBL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043550 "regulation of lipid kinase activity"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005667
GO:GO:0000122 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
KO:K04681 InterPro:IPR024599 Pfam:PF11934 CTD:5933 OMA:RRDMQPL
GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934 EMBL:DAAA02036543
EMBL:DAAA02036542 EMBL:DAAA02036544 IPI:IPI00693192
RefSeq:NP_001179531.1 UniGene:Bt.26367 Ensembl:ENSBTAT00000015333
GeneID:524870 KEGG:bta:524870 NextBio:20874052 Uniprot:E1BMR3
Length = 1068
Score = 201 (75.8 bits), Expect = 9.4e-29, Sum P(3) = 9.4e-29
Identities = 52/160 (32%), Positives = 86/160 (53%)
Query: 47 PVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAE 106
P+ M K + C ++ S D Q + +D +A R A L YK+LET+ E
Sbjct: 423 PMENIMKIVKGIGETFCQHYTQ-STDEQPGSHID--FAVNRLKLAEILYYKILETVMVQE 479
Query: 107 AQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQ 161
+ LH +++ L FH ++AC E+VL + + F ++E + + F KVI+
Sbjct: 480 TRRLHGMDMSVLLEQDIFHHSLMACCLEIVLFAYSS-PRTFPWIIEVLNLRPFYFYKVIE 538
Query: 162 SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
IR EE L R++ +HLNS+EE++LES+ W S+++ +L
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEAL 578
Score = 162 (62.1 bits), Expect = 9.4e-29, Sum P(3) = 9.4e-29
Identities = 35/106 (33%), Positives = 62/106 (58%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G +P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 778 GISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 836
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV 469
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 837 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSV 882
Score = 91 (37.1 bits), Expect = 9.4e-29, Sum P(3) = 9.4e-29
Identities = 36/131 (27%), Positives = 55/131 (41%)
Query: 457 KQPQCKPQVFRSVFDHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDAS 516
K P C + + D+I FYN I+ VK ++ +N+D V S
Sbjct: 914 KTPDCSSGPVKE--ERGDLIKFYNTIYVGRVKSFALKYD------LSNQD-HVMEAPPLS 964
Query: 517 VFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLT 574
FP + SP+++S HS+YVSP + ++ S Y G SP K L
Sbjct: 965 PFPHIKQQPGSPRRISQQHSIYVSPHKNGSG---LTPRSALLYKFNG------SPSKSLK 1015
Query: 575 DINHRLNSNRR 585
DIN+ + +
Sbjct: 1016 DINNMIRQGEQ 1026
Score = 57 (25.1 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMC 103
V+TPV++A + L++I+ L + PS L N+ ++ +K+ + ET C
Sbjct: 383 VITPVASATQSVSRLQSIVAGLKNAPSEQL--INIFESCMRNPME-NIMKIVKGIGETFC 439
Score = 44 (20.5 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 26/110 (23%), Positives = 52/110 (47%)
Query: 90 EALKLNYKVLETMCTAEAQVLHAKNLTSLFHRCMLACSAELVLATHKTVTMLFLAVLERI 149
EAL ++ + + E +V+H SL+ +AC ++ K + L RI
Sbjct: 37 EALD-DFTAIRGNYSLEGEVIHWL-ACSLY----VACRKSIIPTVGKGIMEGNCVSLTRI 90
Query: 150 GITAFNLSKVIQSFIRHEE-----SLPRELRRHLNSLEERL-LESMVWEK 193
+ + LS +IQ F + ++ +LP+E R + LE + +++++K
Sbjct: 91 -LRSAKLS-LIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKK 138
>ZFIN|ZDB-GENE-030131-8179 [details] [associations]
symbol:rbl1 "retinoblastoma-like 1 (p107)"
species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
ZFIN:ZDB-GENE-030131-8179 GO:GO:0005634 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
OMA:RRDMQPL EMBL:BX936390 IPI:IPI00770273
Ensembl:ENSDART00000073865 ArrayExpress:F1QY31 Bgee:F1QY31
Uniprot:F1QY31
Length = 1058
Score = 210 (79.0 bits), Expect = 1.6e-28, Sum P(3) = 1.6e-28
Identities = 58/160 (36%), Positives = 88/160 (55%)
Query: 47 PVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAE 106
P + + K L + P+ DL GA+ MD +AE+R A L +K+LE + T E
Sbjct: 424 PTESILNRVKTLGEKFKQAYTNPTDDLPGAH-MD--FAEKRLKLAEILYFKILENVMTQE 480
Query: 107 AQVLHAKNLTSLF-----HRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQ 161
+ L K+ L H +LAC E+VL ++ + F +LE I F KVI+
Sbjct: 481 MKRLQGKDWAVLLEQEVLHCSLLACCLEVVLFSYSS-QRTFPWILEIFQIPPFYFYKVIE 539
Query: 162 SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
FIR EE L R++ +HLNS+EE++LES W + S+++N+L
Sbjct: 540 VFIRSEEGLSRDMVKHLNSIEEQVLESRAWTRDSALWNAL 579
Score = 149 (57.5 bits), Expect = 1.6e-28, Sum P(3) = 1.6e-28
Identities = 33/99 (33%), Positives = 60/99 (60%)
Query: 372 TG-INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQI 430
TG + + F K+ LA+VR+ + +L +S ++R ++ C + +L T L + H+DQ+
Sbjct: 769 TGSLALFFRKVYHLASVRLRDLCLKLDISSELRGKIWT-CFEHSLLHCTDLMKDRHLDQL 827
Query: 431 ILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV 469
+LC Y +++I++ TF++I+ Y QPQ V+RSV
Sbjct: 828 LLCAVYIISRITKEEHTFQDIMKCYRTQPQANSHVYRSV 866
Score = 92 (37.4 bits), Expect = 1.6e-28, Sum P(3) = 1.6e-28
Identities = 35/118 (29%), Positives = 58/118 (49%)
Query: 465 VFRSVFDHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPD- 523
VF S + D+I FYN I+ ++ + A+ T D+ + S FP++
Sbjct: 911 VFESE-ERGDLIQFYNNIYVSKMRSFAFKY-----ALST-LDNRMEAP-PLSPFPSVRSH 962
Query: 524 -MSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRL 580
+SP++VS HS++VSP + S ++ S+ Y G SP K+L+DIN +
Sbjct: 963 TLSPRRVSQKHSIFVSPHKNSSS---LTPSTAYTYRFTG------SPSKELSDINQMI 1011
Score = 48 (22.0 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 10/29 (34%), Positives = 20/29 (68%)
Query: 42 KMVVTPVSTAMTTAKWLRTIICPLPSKPS 70
+++VTPVS+A + L++++ L + PS
Sbjct: 382 EVLVTPVSSATQSVSRLQSMVSGLRNAPS 410
>UNIPROTKB|F1SEM0 [details] [associations]
symbol:RBL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043550 "regulation of lipid kinase activity"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005667
GO:GO:0000122 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 OMA:RRDMQPL GO:GO:0043550
InterPro:IPR015030 Pfam:PF08934 EMBL:CU607009
Ensembl:ENSSSCT00000008022 Uniprot:F1SEM0
Length = 1069
Score = 201 (75.8 bits), Expect = 2.4e-28, Sum P(3) = 2.4e-28
Identities = 52/160 (32%), Positives = 86/160 (53%)
Query: 47 PVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAE 106
P+ M K + C ++ S D Q + +D +A R A L YK+LET+ E
Sbjct: 425 PMENIMKIVKGIGEAFCQHYTQ-STDEQPGSHID--FAVNRLKLAEILYYKILETIMVQE 481
Query: 107 AQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQ 161
+ LH +++ L FH ++AC E+VL + + F ++E + + F KVI+
Sbjct: 482 TRRLHGMDMSVLLEQDIFHHSLMACCLEIVLFAYSS-PRTFPWIIEVLNLRPFYFYKVIE 540
Query: 162 SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
IR EE L R++ +HLNS+EE++LES+ W S+++ +L
Sbjct: 541 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEAL 580
Score = 162 (62.1 bits), Expect = 2.4e-28, Sum P(3) = 2.4e-28
Identities = 35/106 (33%), Positives = 62/106 (58%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G +P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 779 GISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 837
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV 469
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 838 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSV 883
Score = 87 (35.7 bits), Expect = 2.4e-28, Sum P(3) = 2.4e-28
Identities = 36/131 (27%), Positives = 53/131 (40%)
Query: 457 KQPQCKPQVFRSVFDHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDAS 516
K P C + + D+I FYN I+ VK ++ +N D V S
Sbjct: 915 KTPDCSSGPVKE--ERGDLIKFYNTIYVGRVKSFALKYD------LSNHD-HVMEAPPLS 965
Query: 517 VFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLT 574
FP + SP+++S HS+YVSP + + S Y G SP K L
Sbjct: 966 PFPHIKQQPGSPRRISQQHSIYVSPHKNGSGP---TPRSALLYKFNG------SPSKSLK 1016
Query: 575 DINHRLNSNRR 585
DIN+ + +
Sbjct: 1017 DINNMIRQGEQ 1027
Score = 53 (23.7 bits), Expect = 7.4e-13, Sum P(3) = 7.4e-13
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADL 73
V+TPV++A + L++I+ L + PS L
Sbjct: 385 VITPVASATQSVSRLQSIVAGLKNAPSEQL 414
Score = 45 (20.9 bits), Expect = 4.8e-12, Sum P(3) = 4.8e-12
Identities = 26/110 (23%), Positives = 52/110 (47%)
Query: 90 EALKLNYKVLETMCTAEAQVLHAKNLTSLFHRCMLACSAELVLATHKTVTMLFLAVLERI 149
EAL ++ + + E +V+H SL+ +AC ++ K + L RI
Sbjct: 37 EALD-DFTAIRGTYSLEGEVIHWL-ACSLY----VACRKSIIPTVGKGIMEGNCVSLTRI 90
Query: 150 GITAFNLSKVIQSFIRHEE-----SLPRELRRHLNSLEERL-LESMVWEK 193
+ + LS +IQ F + ++ +LP+E R + LE + +++++K
Sbjct: 91 -LRSAKLS-LIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKK 138
>UNIPROTKB|H9KZ75 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0005634 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GeneTree:ENSGT00530000063235 OMA:CCIDLIY InterPro:IPR024599
Pfam:PF11934 EMBL:AADN02043607 Ensembl:ENSGALT00000005807
Uniprot:H9KZ75
Length = 981
Score = 190 (71.9 bits), Expect = 1.7e-25, Sum P(3) = 1.7e-25
Identities = 52/161 (32%), Positives = 90/161 (55%)
Query: 47 PVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQ-RRLEALKLNYKVLETMCTA 105
P + + K + + C A+ + +NL ++ ++ RR E L YKVLE++
Sbjct: 354 PSQSIASRVKEMYEVYC---QSMQAEEEFSNLSKDVASKHFRRAEVLY--YKVLESVIEQ 408
Query: 106 EAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVI 160
E + L +L+++ FHR +LAC E+V T+K + F + E I ++ KVI
Sbjct: 409 ERRRLGDTDLSAVLEQDVFHRSLLACCLEIVTFTYK-LPGSFPFITEIFDIPVYHFYKVI 467
Query: 161 QSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
+ FIR E+ L RE+ +HLN +EE++LESM W++ S +++ +
Sbjct: 468 EVFIRAEDGLCREVVKHLNHIEEQILESMAWKQESILWDRI 508
Score = 152 (58.6 bits), Expect = 1.7e-25, Sum P(3) = 1.7e-25
Identities = 30/96 (31%), Positives = 60/96 (62%)
Query: 374 INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILC 433
+++ F K+ LA+VR+ + +L +S ++R+ V+ C + +L + + H+DQ+++C
Sbjct: 734 LSLFFRKVYHLASVRLRDLSVKLDISDELRKKVWT-CFEYSLMHCPEIMMDRHLDQLLMC 792
Query: 434 CFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV 469
Y +AK+++ + +F+ I+ Y QPQ K V+RSV
Sbjct: 793 AIYVMAKVTKEDRSFQNIMRCYRTQPQAKSHVYRSV 828
Score = 80 (33.2 bits), Expect = 1.7e-25, Sum P(3) = 1.7e-25
Identities = 27/86 (31%), Positives = 43/86 (50%)
Query: 474 DIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKV--SA 531
D+I FYN I+ +K ++ GT D+ S +P++ SP++V S
Sbjct: 902 DLIQFYNSIYIEQIKEFALKYTSSGT------DTP-----PLSPYPSVRISSPRRVQLSQ 950
Query: 532 THSVYVSPLRTSEMDALISHSSKSYY 557
H+VY+SP + + AL SH K +Y
Sbjct: 951 NHAVYISPHKN--VSAL-SHREKIFY 973
Score = 54 (24.1 bits), Expect = 2.6e-11, Sum P(3) = 2.6e-11
Identities = 32/127 (25%), Positives = 56/127 (44%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCT 104
VTPVS A + L T++ L + PS +L+ + Q +K Y+V
Sbjct: 315 VTPVSIATYSLSRLHTMLAGLKNAPSENLEQIFRACSRDPSQSIASRVKEMYEVYCQSMQ 374
Query: 105 AEAQVLH-AKNLTSLFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSF 163
AE + + +K++ S R AE++ +K + + R+G T +LS V++
Sbjct: 375 AEEEFSNLSKDVASKHFR-----RAEVLY--YKVLESVIEQERRRLGDT--DLSAVLEQD 425
Query: 164 IRHEESL 170
+ H L
Sbjct: 426 VFHRSLL 432
Score = 37 (18.1 bits), Expect = 1.0e-13, Sum P(3) = 1.0e-13
Identities = 13/50 (26%), Positives = 21/50 (42%)
Query: 411 PKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQ 460
P +TL + + Q + G+A + +TF + N G QPQ
Sbjct: 623 PGQTLVTVATATVTANNGQTVTIPVQGIANENG-GITFFPVQVNVGAQPQ 671
>UNIPROTKB|H9L1Q3 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0005634 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
EMBL:AADN02043607 Ensembl:ENSGALT00000035613 Uniprot:H9L1Q3
Length = 939
Score = 190 (71.9 bits), Expect = 1.8e-25, Sum P(3) = 1.8e-25
Identities = 52/161 (32%), Positives = 90/161 (55%)
Query: 47 PVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQ-RRLEALKLNYKVLETMCTA 105
P + + K + + C A+ + +NL ++ ++ RR E L YKVLE++
Sbjct: 311 PSQSIASRVKEMYEVYC---QSMQAEEEFSNLSKDVASKHFRRAEVLY--YKVLESVIEQ 365
Query: 106 EAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVI 160
E + L +L+++ FHR +LAC E+V T+K + F + E I ++ KVI
Sbjct: 366 ERRRLGDTDLSAVLEQDVFHRSLLACCLEIVTFTYK-LPGSFPFITEIFDIPVYHFYKVI 424
Query: 161 QSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
+ FIR E+ L RE+ +HLN +EE++LESM W++ S +++ +
Sbjct: 425 EVFIRAEDGLCREVVKHLNHIEEQILESMAWKQESILWDRI 465
Score = 152 (58.6 bits), Expect = 1.8e-25, Sum P(3) = 1.8e-25
Identities = 30/96 (31%), Positives = 60/96 (62%)
Query: 374 INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILC 433
+++ F K+ LA+VR+ + +L +S ++R+ V+ C + +L + + H+DQ+++C
Sbjct: 691 LSLFFRKVYHLASVRLRDLSVKLDISDELRKKVWT-CFEYSLMHCPEIMMDRHLDQLLMC 749
Query: 434 CFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV 469
Y +AK+++ + +F+ I+ Y QPQ K V+RSV
Sbjct: 750 AIYVMAKVTKEDRSFQNIMRCYRTQPQAKSHVYRSV 785
Score = 79 (32.9 bits), Expect = 1.8e-25, Sum P(3) = 1.8e-25
Identities = 26/86 (30%), Positives = 42/86 (48%)
Query: 474 DIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKV--SA 531
D+I FYN I+ +K A+K + + S +P++ SP++V S
Sbjct: 859 DLIQFYNSIYIEQIKEF---------ALKYTSSGQTD-TPPLSPYPSVRISSPRRVQLSQ 908
Query: 532 THSVYVSPLRTSEMDALISHSSKSYY 557
H+VY+SP + + AL SH K +Y
Sbjct: 909 NHAVYISPHKN--VSAL-SHREKIFY 931
Score = 54 (24.1 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 32/127 (25%), Positives = 56/127 (44%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCT 104
VTPVS A + L T++ L + PS +L+ + Q +K Y+V
Sbjct: 272 VTPVSIATYSLSRLHTMLAGLKNAPSENLEQIFRACSRDPSQSIASRVKEMYEVYCQSMQ 331
Query: 105 AEAQVLH-AKNLTSLFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSF 163
AE + + +K++ S R AE++ +K + + R+G T +LS V++
Sbjct: 332 AEEEFSNLSKDVASKHFR-----RAEVLY--YKVLESVIEQERRRLGDT--DLSAVLEQD 382
Query: 164 IRHEESL 170
+ H L
Sbjct: 383 VFHRSLL 389
Score = 40 (19.1 bits), Expect = 7.3e-10, Sum P(3) = 7.3e-10
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 110 LHAKNLTSLFHRCMLACSAELVLATHKTVTMLFLAVLERIGI 151
+HAK L FH S++ K ++ + VLE GI
Sbjct: 108 VHAKGLPEDFHSKDYKVSSDPPCIIEKLCSLHYGLVLEAKGI 149
Score = 37 (18.1 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 13/50 (26%), Positives = 21/50 (42%)
Query: 411 PKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQ 460
P +TL + + Q + G+A + +TF + N G QPQ
Sbjct: 580 PGQTLVTVATATVTANNGQTVTIPVQGIANENG-GITFFPVQVNVGAQPQ 628
>UNIPROTKB|Q9BDQ3 [details] [associations]
symbol:RB1 "Retinoblastoma protein 1" species:9598 "Pan
troglodytes" [GO:0005634 "nucleus" evidence=ISS] [GO:0006469
"negative regulation of protein kinase activity" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0016605 "PML body" evidence=ISS] [GO:0019900 "kinase binding"
evidence=ISS] [GO:0043550 "regulation of lipid kinase activity"
evidence=ISS] [GO:0045445 "myoblast differentiation" evidence=ISS]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0006469 GO:GO:0016605 GO:GO:0019900 GO:GO:0051726
GO:GO:0008134 GO:GO:0045445 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 eggNOG:NOG296920 InterPro:IPR024599
Pfam:PF11934 GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934
HSSP:P06400 HOGENOM:HOG000136539 HOVERGEN:HBG008967
InterPro:IPR015652 PANTHER:PTHR13742:SF10 OrthoDB:EOG4TXBRB
EMBL:AH010623 ProteinModelPortal:Q9BDQ3 STRING:Q9BDQ3
InParanoid:Q9BDQ3 Uniprot:Q9BDQ3
Length = 882
Score = 184 (69.8 bits), Expect = 3.4e-24, Sum P(3) = 3.4e-24
Identities = 51/183 (27%), Positives = 94/183 (51%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLCPKRTLNQRTSLFFN 424
+P T +++ + K+ +LA +R+N + ERL LS+ ++ ++ L + TL L +
Sbjct: 594 KPLKSTSLSLFYKKVYRLAYLRLNTLCERL-LSEHPELEHIIWTLF-QHTLQNEYELMRD 651
Query: 425 CHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYN 480
H+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN
Sbjct: 652 RHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYN 711
Query: 481 KIFAPTVKPLLVELGPVGTAMKTNRDSEVNH-NNDASVFPALPDMSPKKVSATHSVYVSP 539
+F +K +++ T T S + H FP+ SP ++ + +Y+SP
Sbjct: 712 SVFMQRLKTNILQYA--STRPPTL--SPIPHIPRSPYKFPS----SPLRIPGGN-IYISP 762
Query: 540 LRT 542
L++
Sbjct: 763 LKS 765
Score = 178 (67.7 bits), Expect = 3.4e-24, Sum P(3) = 3.4e-24
Identities = 43/128 (33%), Positives = 73/128 (57%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 398 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 457
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 458 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAW 517
Query: 192 EKGSSMYN 199
S +++
Sbjct: 518 LSDSPLFD 525
Score = 46 (21.3 bits), Expect = 3.4e-24, Sum P(3) = 3.4e-24
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADL 73
TPV T M T + L I+ +PS +L
Sbjct: 327 TPVRTVMNTIQQLMMILNSASDQPSENL 354
Score = 37 (18.1 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 192 EKGSSMYNSLTVARPALSAEINLGFTDILFQDSQDSWE 229
E S Y + + L A + L L DS DS+E
Sbjct: 269 ENLSKRYEEIYLKNKDLDARLFLDHDKTLQTDSIDSFE 306
>UNIPROTKB|P06400 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0042551 "neuron maturation" evidence=IEA] [GO:0043353
"enucleate erythrocyte differentiation" evidence=IEA] [GO:0045651
"positive regulation of macrophage differentiation" evidence=IEA]
[GO:0045879 "negative regulation of smoothened signaling pathway"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048565
"digestive tract development" evidence=IEA] [GO:0048667 "cell
morphogenesis involved in neuron differentiation" evidence=IEA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0051146 "striated muscle cell differentiation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0051402
"neuron apoptotic process" evidence=IEA] [GO:0071930 "negative
regulation of transcription involved in G1/S phase of mitotic cell
cycle" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016605 "PML body" evidence=IDA] [GO:0043550 "regulation of
lipid kinase activity" evidence=IDA] [GO:0019900 "kinase binding"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=NAS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0050681 "androgen receptor
binding" evidence=NAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA;TAS] [GO:0045445
"myoblast differentiation" evidence=IMP] [GO:0006469 "negative
regulation of protein kinase activity" evidence=IPI] [GO:0030521
"androgen receptor signaling pathway" evidence=NAS] [GO:0031625
"ubiquitin protein ligase binding" evidence=IPI] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0001047 "core promoter binding" evidence=IDA] [GO:0000075 "cell
cycle checkpoint" evidence=TAS] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0000785
"chromatin" evidence=TAS] [GO:0000080 "G1 phase of mitotic cell
cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007265 "Ras protein
signal transduction" evidence=IEP] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0090230 "regulation of centromere
complex assembly" evidence=TAS] [GO:0034088 "maintenance of mitotic
sister chromatid cohesion" evidence=IMP] [GO:0045842 "positive
regulation of mitotic metaphase/anaphase transition" evidence=IMP]
[GO:0071922 "regulation of cohesin localization to chromatin"
evidence=IMP] [GO:0071459 "protein localization to chromosome,
centromeric region" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0000083 "regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=TAS] [GO:0045749 "negative regulation
of S phase of mitotic cell cycle" evidence=TAS] [GO:0007050 "cell
cycle arrest" evidence=TAS] [GO:0035189 "Rb-E2F complex"
evidence=TAS] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=TAS]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=TAS]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0045892 GO:GO:0007265 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0045893 GO:GO:0030521 GO:GO:0051301 GO:GO:0030308
GO:GO:0005819 GO:GO:0006469 GO:GO:0016605 EMBL:CH471075
GO:GO:0045944 GO:GO:0051402 GO:GO:0000785 GO:GO:0003700
GO:GO:0007050 GO:GO:0006351 GO:GO:0006338 GO:GO:0019900
GO:GO:0003713 GO:GO:0016514 GO:GO:0001047 GO:GO:0043433
GO:GO:0051146 GO:GO:0031175 GO:GO:0048565 GO:GO:0071459
GO:GO:0000084 GO:GO:0050680 GO:GO:0050681 GO:GO:0045749
GO:GO:0045445 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0031134 GO:GO:0000080
Pathway_Interaction_DB:foxm1pathway GO:GO:0000083 GO:GO:0045651
DrugBank:DB00047 DrugBank:DB00046 DrugBank:DB00030 DrugBank:DB00071
GO:GO:0071922 Reactome:REACT_383 PDB:1H25 PDBsum:1H25 GO:GO:0045842
GO:GO:0045879 GO:GO:0042551 GO:GO:0031575 GO:GO:0035189
GO:GO:0043353 MIM:259500 GO:GO:0034088 PDB:2R7G PDBsum:2R7G
GO:GO:0071930 PDB:1O9K PDB:2AZE PDBsum:1O9K PDBsum:2AZE PDB:1N4M
PDBsum:1N4M GO:GO:0048667 MIM:109800 EMBL:L11910 EMBL:AF551763
EMBL:AL392048 PDB:1GH6 PDBsum:1GH6 PDB:3N5U PDBsum:3N5U
eggNOG:NOG296920 InterPro:IPR024599 Pfam:PF11934 GO:GO:0043550
InterPro:IPR015030 Pfam:PF08934 CTD:5925 HOVERGEN:HBG008967
KO:K06618 InterPro:IPR015652 PANTHER:PTHR13742:SF10 EMBL:M15400
EMBL:M28419 EMBL:M33647 EMBL:L41870 EMBL:M27866 EMBL:M27845
EMBL:M27846 EMBL:M27847 EMBL:M27849 EMBL:M27850 EMBL:M27851
EMBL:L35146 EMBL:M27852 EMBL:M27853 EMBL:M27854 EMBL:M27855
EMBL:M27856 EMBL:M27857 EMBL:M27858 EMBL:M27859 EMBL:M27860
EMBL:L35147 EMBL:M27862 EMBL:M27863 EMBL:M27864 EMBL:M27865
EMBL:L41889 EMBL:L41890 EMBL:L41891 EMBL:L41893 EMBL:L41894
EMBL:L41895 EMBL:L41896 EMBL:L41897 EMBL:L41898 EMBL:L41899
EMBL:L41997 EMBL:X16439 EMBL:AK291258 EMBL:AL136960 EMBL:BC039060
EMBL:BC040540 IPI:IPI00302829 PIR:JS0276 RefSeq:NP_000312.2
UniGene:Hs.408528 PDB:1AD6 PDB:1GUX PDB:1PJM PDB:2QDJ PDB:3POM
PDB:4ELJ PDB:4ELL PDBsum:1AD6 PDBsum:1GUX PDBsum:1PJM PDBsum:2QDJ
PDBsum:3POM PDBsum:4ELJ PDBsum:4ELL ProteinModelPortal:P06400
SMR:P06400 DIP:DIP-582N IntAct:P06400 MINT:MINT-98847 STRING:P06400
PhosphoSite:P06400 DMDM:132164 PaxDb:P06400 PeptideAtlas:P06400
PRIDE:P06400 DNASU:5925 Ensembl:ENST00000267163 GeneID:5925
KEGG:hsa:5925 UCSC:uc001vcb.3 GeneCards:GC13P048877 HGNC:HGNC:9884
HPA:CAB000095 HPA:CAB016687 MIM:180200 MIM:614041
neXtProt:NX_P06400 Orphanet:790 PharmGKB:PA295 InParanoid:P06400
OMA:TNILQYA OrthoDB:EOG4TXBRB PhylomeDB:P06400 BindingDB:P06400
ChEMBL:CHEMBL5288 ChiTaRS:RB1 EvolutionaryTrace:P06400
GenomeRNAi:5925 NextBio:23076 PMAP-CutDB:P06400 ArrayExpress:P06400
Bgee:P06400 CleanEx:HS_RB1 Genevestigator:P06400
GermOnline:ENSG00000139687 GO:GO:0090230 Uniprot:P06400
Length = 928
Score = 184 (69.8 bits), Expect = 4.1e-24, Sum P(3) = 4.1e-24
Identities = 51/183 (27%), Positives = 94/183 (51%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLCPKRTLNQRTSLFFN 424
+P T +++ + K+ +LA +R+N + ERL LS+ ++ ++ L + TL L +
Sbjct: 640 KPLKSTSLSLFYKKVYRLAYLRLNTLCERL-LSEHPELEHIIWTLF-QHTLQNEYELMRD 697
Query: 425 CHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYN 480
H+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN
Sbjct: 698 RHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYN 757
Query: 481 KIFAPTVKPLLVELGPVGTAMKTNRDSEVNH-NNDASVFPALPDMSPKKVSATHSVYVSP 539
+F +K +++ T T S + H FP+ SP ++ + +Y+SP
Sbjct: 758 SVFMQRLKTNILQYA--STRPPTL--SPIPHIPRSPYKFPS----SPLRIPGGN-IYISP 808
Query: 540 LRT 542
L++
Sbjct: 809 LKS 811
Score = 178 (67.7 bits), Expect = 4.1e-24, Sum P(3) = 4.1e-24
Identities = 43/128 (33%), Positives = 73/128 (57%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 444 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 503
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 504 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAW 563
Query: 192 EKGSSMYN 199
S +++
Sbjct: 564 LSDSPLFD 571
Score = 46 (21.3 bits), Expect = 4.1e-24, Sum P(3) = 4.1e-24
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADL 73
TPV T M T + L I+ +PS +L
Sbjct: 373 TPVRTVMNTIQQLMMILNSASDQPSENL 400
Score = 37 (18.1 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 192 EKGSSMYNSLTVARPALSAEINLGFTDILFQDSQDSWE 229
E S Y + + L A + L L DS DS+E
Sbjct: 315 ENLSKRYEEIYLKNKDLDARLFLDHDKTLQTDSIDSFE 352
>UNIPROTKB|A5D7M0 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043550 "regulation of lipid kinase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0005737 GO:GO:0005730 GO:GO:0005667
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 eggNOG:NOG296920 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 HOGENOM:HOG000273892
HOVERGEN:HBG017710 GO:GO:0043550 CTD:5934 KO:K16332 OMA:PPGNFPF
OrthoDB:EOG4PNXG9 EMBL:DAAA02046444 EMBL:BC140608 IPI:IPI00852473
RefSeq:NP_001091542.1 UniGene:Bt.17722 STRING:A5D7M0
Ensembl:ENSBTAT00000021613 GeneID:533294 KEGG:bta:533294
InParanoid:A5D7M0 NextBio:20875987 Uniprot:A5D7M0
Length = 1140
Score = 168 (64.2 bits), Expect = 4.3e-24, Sum P(4) = 4.3e-24
Identities = 42/132 (31%), Positives = 75/132 (56%)
Query: 75 GANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
G+N +I ++ R + L YKVLE++ E + L +L+ + FHR +LAC E
Sbjct: 480 GSNCAKDIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLACCLE 538
Query: 130 LVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESM 189
+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++L+ +
Sbjct: 539 VVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILDHL 597
Query: 190 VWEKGSSMYNSL 201
W+ S +++ +
Sbjct: 598 AWKPESPLWDRI 609
Score = 160 (61.4 bits), Expect = 4.3e-24, Sum P(4) = 4.3e-24
Identities = 31/102 (30%), Positives = 63/102 (61%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 830 PRKTSSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 888
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV 469
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 889 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSV 930
Score = 75 (31.5 bits), Expect = 4.3e-24, Sum P(4) = 4.3e-24
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 474 DIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKV--SA 531
D+I FYN I+ +K AMK ++ + ++ S +P + SP+++ S
Sbjct: 1004 DLIQFYNNIYIRQMKTF---------AMKYSQANAMDAP-PLSPYPFVRTGSPRRIQLSQ 1053
Query: 532 THSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNR---RVRG 588
H VY+SP + +A++S K +Y + SP K L +IN + + + RG
Sbjct: 1054 NHPVYISPHKN---EAMLSPREKIFYY------FSNSPSKRLREINSMIRTGETPTKKRG 1104
Query: 589 AL 590
L
Sbjct: 1105 IL 1106
Score = 52 (23.4 bits), Expect = 4.3e-24, Sum P(4) = 4.3e-24
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQ 74
VTPVSTA + L T++ L + PS L+
Sbjct: 416 VTPVSTATHSLSRLHTMLTGLRNAPSERLE 445
>UNIPROTKB|E1BZL8 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005634
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934 InterPro:IPR015652
PANTHER:PTHR13742:SF10 EMBL:AADN02005407 EMBL:AADN02005408
EMBL:AADN02005409 IPI:IPI00682055 Ensembl:ENSGALT00000030147
ArrayExpress:E1BZL8 Uniprot:E1BZL8
Length = 902
Score = 184 (69.8 bits), Expect = 7.5e-24, Sum P(3) = 7.5e-24
Identities = 47/180 (26%), Positives = 90/180 (50%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R++ + RL E + + TL + L + H
Sbjct: 625 KPQKSTSLSLFYKKVFRLAYLRLHTLFFRLLSEHPDLEPLIWTLFQHTLQNESELMRDRH 684
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---DHVD-IITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y + P + F+ V + D II FYN +
Sbjct: 685 LDQIMMCSMYGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLIREEQYDSIIVFYNLV 744
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRT 542
F +K +++ +NR ++ P SP++V A +++Y+SPL++
Sbjct: 745 FMQKLKTNILQYA-------SNRPPTLSPIPHIPRSPYQFSNSPRRVPAGNNIYISPLKS 797
Score = 175 (66.7 bits), Expect = 7.5e-24, Sum P(3) = 7.5e-24
Identities = 43/130 (33%), Positives = 74/130 (56%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATH-KTVT 139
QR ++L Y+V+E+M +E + L N + L FH +LAC+ E+V+AT+ +T +
Sbjct: 427 QRYQLGVRLYYRVMESMLKSEEERLSVHNFSKLLNDNIFHTSLLACALEIVMATYGRTAS 486
Query: 140 ----------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESM 189
+ F +L + AF+ KVI+SFI+ E SL R++ +HL E R++ES+
Sbjct: 487 QSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVEPSLTRDMIKHLERCEHRIMESL 546
Query: 190 VWEKGSSMYN 199
W+ S +++
Sbjct: 547 AWQSDSPLFD 556
Score = 46 (21.3 bits), Expect = 7.5e-24, Sum P(3) = 7.5e-24
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADL 73
TPV AM T + L I+ KPS L
Sbjct: 356 TPVRAAMNTIQQLMMILNSATDKPSDTL 383
Score = 41 (19.5 bits), Expect = 3.5e-09, Sum P(3) = 3.5e-09
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 509 VNHNNDASVFPALPDMSPKKVSATH 533
+ HN+ A+ P SPKK ++ H
Sbjct: 581 LQHNHTAADLYLSPVRSPKKKASGH 605
>UNIPROTKB|E1C0H8 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005634
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934 InterPro:IPR015652
PANTHER:PTHR13742:SF10 EMBL:AADN02005407 EMBL:AADN02005408
EMBL:AADN02005409 IPI:IPI00821844 Ensembl:ENSGALT00000036485
ArrayExpress:E1C0H8 Uniprot:E1C0H8
Length = 908
Score = 184 (69.8 bits), Expect = 7.7e-24, Sum P(3) = 7.7e-24
Identities = 47/180 (26%), Positives = 90/180 (50%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R++ + RL E + + TL + L + H
Sbjct: 631 KPQKSTSLSLFYKKVFRLAYLRLHTLFFRLLSEHPDLEPLIWTLFQHTLQNESELMRDRH 690
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---DHVD-IITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y + P + F+ V + D II FYN +
Sbjct: 691 LDQIMMCSMYGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLIREEQYDSIIVFYNLV 750
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRT 542
F +K +++ +NR ++ P SP++V A +++Y+SPL++
Sbjct: 751 FMQKLKTNILQYA-------SNRPPTLSPIPHIPRSPYQFSNSPRRVPAGNNIYISPLKS 803
Score = 175 (66.7 bits), Expect = 7.7e-24, Sum P(3) = 7.7e-24
Identities = 43/130 (33%), Positives = 74/130 (56%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATH-KTVT 139
QR ++L Y+V+E+M +E + L N + L FH +LAC+ E+V+AT+ +T +
Sbjct: 433 QRYQLGVRLYYRVMESMLKSEEERLSVHNFSKLLNDNIFHTSLLACALEIVMATYGRTAS 492
Query: 140 ----------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESM 189
+ F +L + AF+ KVI+SFI+ E SL R++ +HL E R++ES+
Sbjct: 493 QSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVEPSLTRDMIKHLERCEHRIMESL 552
Query: 190 VWEKGSSMYN 199
W+ S +++
Sbjct: 553 AWQSDSPLFD 562
Score = 46 (21.3 bits), Expect = 7.7e-24, Sum P(3) = 7.7e-24
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADL 73
TPV AM T + L I+ KPS L
Sbjct: 362 TPVRAAMNTIQQLMMILNSATDKPSDTL 389
Score = 41 (19.5 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 509 VNHNNDASVFPALPDMSPKKVSATH 533
+ HN+ A+ P SPKK ++ H
Sbjct: 587 LQHNHTAADLYLSPVRSPKKKASGH 611
>UNIPROTKB|Q90600 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0019048 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0016568 GO:GO:0007049 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
eggNOG:NOG296920 InterPro:IPR024599 Pfam:PF11934 InterPro:IPR015030
Pfam:PF08934 HSSP:P06400 EMBL:X72218 EMBL:U00113 EMBL:X72217
IPI:IPI00592698 PIR:S45298 RefSeq:NP_989750.1 UniGene:Gga.2986
ProteinModelPortal:Q90600 SMR:Q90600 STRING:Q90600 GeneID:386582
KEGG:gga:386582 CTD:5925 HOGENOM:HOG000136539 HOVERGEN:HBG008967
KO:K06618 NextBio:20813945 InterPro:IPR015652
PANTHER:PTHR13742:SF10 Uniprot:Q90600
Length = 921
Score = 184 (69.8 bits), Expect = 8.1e-24, Sum P(3) = 8.1e-24
Identities = 47/180 (26%), Positives = 90/180 (50%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R++ + RL E + + TL + L + H
Sbjct: 632 KPQKSTSLSLFYKKVFRLAYLRLHTLFFRLLSEHPDLEPLIWTLFQHTLQNESELMRDRH 691
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---DHVD-IITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y + P + F+ V + D II FYN +
Sbjct: 692 LDQIMMCSMYGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLIREEQYDSIIVFYNLV 751
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRT 542
F +K +++ +NR ++ P SP++V A +++Y+SPL++
Sbjct: 752 FMQKLKTNILQYA-------SNRPPTLSPIPHIPRSPYQFSNSPRRVPAGNNIYISPLKS 804
Score = 175 (66.7 bits), Expect = 8.1e-24, Sum P(3) = 8.1e-24
Identities = 43/130 (33%), Positives = 74/130 (56%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATH-KTVT 139
QR ++L Y+V+E+M +E + L N + L FH +LAC+ E+V+AT+ +T +
Sbjct: 434 QRYQLGVRLYYRVMESMLKSEEERLSVHNFSKLLNDNIFHTSLLACALEIVMATYGRTAS 493
Query: 140 ----------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESM 189
+ F +L + AF+ KVI+SFI+ E SL R++ +HL E R++ES+
Sbjct: 494 QSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVEPSLTRDMIKHLERCEHRIMESL 553
Query: 190 VWEKGSSMYN 199
W+ S +++
Sbjct: 554 AWQSDSPLFD 563
Score = 46 (21.3 bits), Expect = 8.1e-24, Sum P(3) = 8.1e-24
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADL 73
TPV AM T + L I+ KPS L
Sbjct: 363 TPVRAAMNTIQQLMMILNSATDKPSDTL 390
Score = 41 (19.5 bits), Expect = 3.8e-09, Sum P(3) = 3.8e-09
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 509 VNHNNDASVFPALPDMSPKKVSATH 533
+ HN+ A+ P SPKK ++ H
Sbjct: 588 LQHNHTAADLYLSPVRSPKKKASGH 612
>UNIPROTKB|F1RK14 [details] [associations]
symbol:RB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071930 "negative regulation of transcription involved
in G1/S phase of mitotic cell cycle" evidence=IEA] [GO:0071922
"regulation of cohesin localization to chromatin" evidence=IEA]
[GO:0071459 "protein localization to chromosome, centromeric
region" evidence=IEA] [GO:0051402 "neuron apoptotic process"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051146 "striated muscle
cell differentiation" evidence=IEA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA]
[GO:0048667 "cell morphogenesis involved in neuron differentiation"
evidence=IEA] [GO:0048565 "digestive tract development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045879
"negative regulation of smoothened signaling pathway" evidence=IEA]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0045651 "positive regulation of
macrophage differentiation" evidence=IEA] [GO:0045445 "myoblast
differentiation" evidence=IEA] [GO:0043550 "regulation of lipid
kinase activity" evidence=IEA] [GO:0043353 "enucleate erythrocyte
differentiation" evidence=IEA] [GO:0042551 "neuron maturation"
evidence=IEA] [GO:0035189 "Rb-E2F complex" evidence=IEA]
[GO:0034088 "maintenance of mitotic sister chromatid cohesion"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0019900 "kinase binding" evidence=IEA]
[GO:0016605 "PML body" evidence=IEA] [GO:0007265 "Ras protein
signal transduction" evidence=IEA] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IEA] [GO:0007050 "cell cycle
arrest" evidence=IEA] [GO:0006469 "negative regulation of protein
kinase activity" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0001047 "core promoter binding"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0007265 GO:GO:0051301 GO:GO:0005819
GO:GO:0006469 GO:GO:0016605 GO:GO:0045944 GO:GO:0051402
GO:GO:0007050 GO:GO:0001047 GO:GO:0051146 GO:GO:0031175
GO:GO:0048565 GO:GO:0071459 GO:GO:0050680 GO:GO:0045445
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0031134 GO:GO:0007090 GO:GO:0045651 GO:GO:0071922
GO:GO:0045842 GO:GO:0045879 GO:GO:0042551 GO:GO:0035189
GO:GO:0043353 GO:GO:0034088 GO:GO:0071930 GO:GO:0048667
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934 CTD:5925 KO:K06618
InterPro:IPR015652 PANTHER:PTHR13742:SF10 OMA:TNILQYA EMBL:CU457728
EMBL:CU406986 RefSeq:XP_001926888.4 Ensembl:ENSSSCT00000010300
GeneID:100151828 KEGG:ssc:100151828 Uniprot:F1RK14
Length = 938
Score = 187 (70.9 bits), Expect = 8.3e-24, Sum P(3) = 8.3e-24
Identities = 52/177 (29%), Positives = 90/177 (50%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 453 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 512
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 513 QNLDTGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAW 572
Query: 192 EKGSSMYNSLTVAR----PALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPT 244
S +++ + A+ PA E ++ Q + + + + S L P T
Sbjct: 573 RSDSPLFDLIKQAKDREGPADHLESACTLINLPLQSNHTAADMYLSPLRSPKKKGST 629
Score = 172 (65.6 bits), Expect = 8.3e-24, Sum P(3) = 8.3e-24
Identities = 47/179 (26%), Positives = 85/179 (47%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 650 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 709
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 710 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSV 769
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLR 541
F +K +++ T T S + H + P SP ++ + +Y+SPL+
Sbjct: 770 FMQRLKTNILQYA--STRPPTL--SPIPHIPRS---PYKFSSSPLRIPGGN-IYISPLK 820
Score = 46 (21.3 bits), Expect = 8.3e-24, Sum P(3) = 8.3e-24
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADL 73
TPV T M T + L I+ +PS +L
Sbjct: 382 TPVRTVMNTIQQLMMILNSASDQPSENL 409
>MGI|MGI:105085 [details] [associations]
symbol:Rbl2 "retinoblastoma-like 2" species:10090 "Mus
musculus" [GO:0000785 "chromatin" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0043550 "regulation of lipid kinase activity"
evidence=ISO] [GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
EMBL:U50850 MGI:MGI:105085 GO:GO:0005737 GO:GO:0005730
GO:GO:0006355 GO:GO:0003677 GO:GO:0000785 GO:GO:0006351
GO:GO:0016568 GO:GO:0005667 GO:GO:0007049 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
eggNOG:NOG296920 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 HOGENOM:HOG000273892 HOVERGEN:HBG017710 GO:GO:0043550
CTD:5934 KO:K16332 OMA:PPGNFPF OrthoDB:EOG4PNXG9 EMBL:U36799
EMBL:U47333 EMBL:AK160027 IPI:IPI00317271 RefSeq:NP_035380.3
UniGene:Mm.235580 ProteinModelPortal:Q64700 SMR:Q64700
IntAct:Q64700 MINT:MINT-5181879 STRING:Q64700 PhosphoSite:Q64700
PaxDb:Q64700 PRIDE:Q64700 Ensembl:ENSMUST00000034091 GeneID:19651
KEGG:mmu:19651 InParanoid:Q3TVP8 NextBio:296912 Bgee:Q64700
CleanEx:MM_RBL2 Genevestigator:Q64700 GermOnline:ENSMUSG00000031666
Uniprot:Q64700
Length = 1135
Score = 165 (63.1 bits), Expect = 8.9e-24, Sum P(4) = 8.9e-24
Identities = 39/113 (34%), Positives = 66/113 (58%)
Query: 94 LNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLER 148
L YKVLE++ E + L +L+ + FHR +LAC E+V +HK F + E
Sbjct: 495 LYYKVLESVIEQEQKRLGDMDLSGVLEHDAFHRSLLACCLEVVAFSHKPPGN-FPFIAEI 553
Query: 149 IGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
+ ++ KVI+ FIR E+ L RE+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 554 FDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLAWKTKSPLWDRI 606
Score = 160 (61.4 bits), Expect = 8.9e-24, Sum P(4) = 8.9e-24
Identities = 32/102 (31%), Positives = 63/102 (61%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + + + F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q T L + H+
Sbjct: 826 PRKTSSLALFFRKVYYLAGVRLRDLCIKLDISDELRKKIWT-CFEFSIIQCTELMMDRHL 884
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV 469
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 885 DQLLMCAIYVMAKVTKEDRSFQNIMRCYRTQPQARSQVYRSV 926
Score = 74 (31.1 bits), Expect = 8.9e-24, Sum P(4) = 8.9e-24
Identities = 32/122 (26%), Positives = 54/122 (44%)
Query: 474 DIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKV--SA 531
D+I FYN I+ ++ AMK ++ + S +P + SP++V S
Sbjct: 998 DLIQFYNNIYRKQIQAF---------AMKYSQANAQTDTPPLSPYPFVRTGSPRRVQLSQ 1048
Query: 532 THSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNR---RVRG 588
+H +Y+SP +A+ S K +Y + SP K L +IN + + + RG
Sbjct: 1049 SHPIYISPHNN---EAMPSPREKIFYY------FSNSPSKRLREINSMIRTGETPTKKRG 1099
Query: 589 AL 590
L
Sbjct: 1100 IL 1101
Score = 53 (23.7 bits), Expect = 8.9e-24, Sum P(4) = 8.9e-24
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQ 74
VTPVSTA + L T++ L + PS L+
Sbjct: 413 VTPVSTAAHSLSRLHTMLSGLRNAPSEKLE 442
>UNIPROTKB|F1NAY1 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0001047 "core promoter binding" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IEA] [GO:0007050 "cell cycle arrest" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007265 "Ras protein signal transduction"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0031134 "sister chromatid
biorientation" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0034088 "maintenance of mitotic sister
chromatid cohesion" evidence=IEA] [GO:0035189 "Rb-E2F complex"
evidence=IEA] [GO:0042551 "neuron maturation" evidence=IEA]
[GO:0043353 "enucleate erythrocyte differentiation" evidence=IEA]
[GO:0043550 "regulation of lipid kinase activity" evidence=IEA]
[GO:0045445 "myoblast differentiation" evidence=IEA] [GO:0045651
"positive regulation of macrophage differentiation" evidence=IEA]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048565 "digestive tract development"
evidence=IEA] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0051146 "striated
muscle cell differentiation" evidence=IEA] [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0071459 "protein localization to chromosome, centromeric
region" evidence=IEA] [GO:0071922 "regulation of cohesin
localization to chromatin" evidence=IEA] [GO:0071930 "negative
regulation of transcription involved in G1/S phase of mitotic cell
cycle" evidence=IEA] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0007265 GO:GO:0051301 GO:GO:0005819
GO:GO:0006469 GO:GO:0016605 GO:GO:0045944 GO:GO:0051402
GO:GO:0007050 GO:GO:0001047 GO:GO:0071459 GO:GO:0050680
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0031134 GO:GO:0007090 GO:GO:0045651 GO:GO:0071922
GO:GO:0045842 GO:GO:0045879 GO:GO:0035189 GO:GO:0034088
GO:GO:0071930 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934
InterPro:IPR015652 PANTHER:PTHR13742:SF10 OMA:TNILQYA
EMBL:AADN02005407 EMBL:AADN02005408 EMBL:AADN02005409
IPI:IPI00819754 Ensembl:ENSGALT00000036486 ArrayExpress:F1NAY1
Uniprot:F1NAY1
Length = 962
Score = 184 (69.8 bits), Expect = 9.7e-24, Sum P(3) = 9.7e-24
Identities = 47/180 (26%), Positives = 90/180 (50%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R++ + RL E + + TL + L + H
Sbjct: 685 KPQKSTSLSLFYKKVFRLAYLRLHTLFFRLLSEHPDLEPLIWTLFQHTLQNESELMRDRH 744
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---DHVD-IITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y + P + F+ V + D II FYN +
Sbjct: 745 LDQIMMCSMYGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLIREEQYDSIIVFYNLV 804
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRT 542
F +K +++ +NR ++ P SP++V A +++Y+SPL++
Sbjct: 805 FMQKLKTNILQYA-------SNRPPTLSPIPHIPRSPYQFSNSPRRVPAGNNIYISPLKS 857
Score = 175 (66.7 bits), Expect = 9.7e-24, Sum P(3) = 9.7e-24
Identities = 43/130 (33%), Positives = 74/130 (56%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATH-KTVT 139
QR ++L Y+V+E+M +E + L N + L FH +LAC+ E+V+AT+ +T +
Sbjct: 487 QRYQLGVRLYYRVMESMLKSEEERLSVHNFSKLLNDNIFHTSLLACALEIVMATYGRTAS 546
Query: 140 ----------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESM 189
+ F +L + AF+ KVI+SFI+ E SL R++ +HL E R++ES+
Sbjct: 547 QSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVEPSLTRDMIKHLERCEHRIMESL 606
Query: 190 VWEKGSSMYN 199
W+ S +++
Sbjct: 607 AWQSDSPLFD 616
Score = 46 (21.3 bits), Expect = 9.7e-24, Sum P(3) = 9.7e-24
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADL 73
TPV AM T + L I+ KPS L
Sbjct: 416 TPVRAAMNTIQQLMMILNSATDKPSDTL 443
Score = 41 (19.5 bits), Expect = 4.5e-09, Sum P(3) = 4.5e-09
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 509 VNHNNDASVFPALPDMSPKKVSATH 533
+ HN+ A+ P SPKK ++ H
Sbjct: 641 LQHNHTAADLYLSPVRSPKKKASGH 665
Score = 37 (18.1 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 10/38 (26%), Positives = 15/38 (39%)
Query: 238 PPTDSPTRQHYENLPWWKEPFTEVDSIFLLIPMPSLDA 275
P +P QH +P K P ++ P +L A
Sbjct: 66 PGGTAPVSQHGPRVPAAKRPMPACIAMLEFAPCDALKA 103
>UNIPROTKB|F1NV90 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005634
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934 InterPro:IPR015652
PANTHER:PTHR13742:SF10 EMBL:AADN02005407 EMBL:AADN02005408
EMBL:AADN02005409 IPI:IPI00818985 Ensembl:ENSGALT00000027459
ArrayExpress:F1NV90 Uniprot:F1NV90
Length = 881
Score = 184 (69.8 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 47/180 (26%), Positives = 90/180 (50%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R++ + RL E + + TL + L + H
Sbjct: 592 KPQKSTSLSLFYKKVFRLAYLRLHTLFFRLLSEHPDLEPLIWTLFQHTLQNESELMRDRH 651
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---DHVD-IITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y + P + F+ V + D II FYN +
Sbjct: 652 LDQIMMCSMYGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLIREEQYDSIIVFYNLV 711
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRT 542
F +K +++ +NR ++ P SP++V A +++Y+SPL++
Sbjct: 712 FMQKLKTNILQYA-------SNRPPTLSPIPHIPRSPYQFSNSPRRVPAGNNIYISPLKS 764
Score = 172 (65.6 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 41/124 (33%), Positives = 72/124 (58%)
Query: 92 LKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATH-KTVT------ 139
++L Y+V+E+M +E + L N + L FH +LAC+ E+V+AT+ +T +
Sbjct: 400 VRLYYRVMESMLKSEEERLSVHNFSKLLNDNIFHTSLLACALEIVMATYGRTASQSDGTS 459
Query: 140 ----MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGS 195
+ F +L + AF+ KVI+SFI+ E SL R++ +HL E R++ES+ W+ S
Sbjct: 460 AETDLSFPWILNVFDLKAFDFYKVIESFIKVEPSLTRDMIKHLERCEHRIMESLAWQSDS 519
Query: 196 SMYN 199
+++
Sbjct: 520 PLFD 523
Score = 46 (21.3 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADL 73
TPV AM T + L I+ KPS L
Sbjct: 321 TPVRAAMNTIQQLMMILNSATDKPSDTL 348
Score = 41 (19.5 bits), Expect = 6.7e-09, Sum P(3) = 6.7e-09
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 509 VNHNNDASVFPALPDMSPKKVSATH 533
+ HN+ A+ P SPKK ++ H
Sbjct: 548 LQHNHTAADLYLSPVRSPKKKASGH 572
>UNIPROTKB|F1NAY3 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005634
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934 IPI:IPI00592698
InterPro:IPR015652 PANTHER:PTHR13742:SF10 EMBL:AADN02005407
EMBL:AADN02005408 EMBL:AADN02005409 Ensembl:ENSGALT00000036484
ArrayExpress:F1NAY3 Uniprot:F1NAY3
Length = 920
Score = 184 (69.8 bits), Expect = 1.7e-23, Sum P(3) = 1.7e-23
Identities = 47/180 (26%), Positives = 90/180 (50%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R++ + RL E + + TL + L + H
Sbjct: 631 KPQKSTSLSLFYKKVFRLAYLRLHTLFFRLLSEHPDLEPLIWTLFQHTLQNESELMRDRH 690
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---DHVD-IITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y + P + F+ V + D II FYN +
Sbjct: 691 LDQIMMCSMYGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLIREEQYDSIIVFYNLV 750
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRT 542
F +K +++ +NR ++ P SP++V A +++Y+SPL++
Sbjct: 751 FMQKLKTNILQYA-------SNRPPTLSPIPHIPRSPYQFSNSPRRVPAGNNIYISPLKS 803
Score = 172 (65.6 bits), Expect = 1.7e-23, Sum P(3) = 1.7e-23
Identities = 41/124 (33%), Positives = 72/124 (58%)
Query: 92 LKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATH-KTVT------ 139
++L Y+V+E+M +E + L N + L FH +LAC+ E+V+AT+ +T +
Sbjct: 439 VRLYYRVMESMLKSEEERLSVHNFSKLLNDNIFHTSLLACALEIVMATYGRTASQSDGTS 498
Query: 140 ----MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGS 195
+ F +L + AF+ KVI+SFI+ E SL R++ +HL E R++ES+ W+ S
Sbjct: 499 AETDLSFPWILNVFDLKAFDFYKVIESFIKVEPSLTRDMIKHLERCEHRIMESLAWQSDS 558
Query: 196 SMYN 199
+++
Sbjct: 559 PLFD 562
Score = 46 (21.3 bits), Expect = 1.7e-23, Sum P(3) = 1.7e-23
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADL 73
TPV AM T + L I+ KPS L
Sbjct: 360 TPVRAAMNTIQQLMMILNSATDKPSDTL 387
Score = 41 (19.5 bits), Expect = 7.9e-09, Sum P(3) = 7.9e-09
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 509 VNHNNDASVFPALPDMSPKKVSATH 533
+ HN+ A+ P SPKK ++ H
Sbjct: 587 LQHNHTAADLYLSPVRSPKKKASGH 611
>RGD|3541 [details] [associations]
symbol:Rbl2 "retinoblastoma-like 2" species:10116 "Rattus
norvegicus" [GO:0000785 "chromatin" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0043550 "regulation of lipid kinase
activity" evidence=IEA;ISO] [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 RGD:3541 GO:GO:0005737 GO:GO:0005730 GO:GO:0006355
GO:GO:0003677 GO:GO:0000785 GO:GO:0006351 GO:GO:0016568 GO:GO:0005667
GO:GO:0007049 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 eggNOG:NOG296920 InterPro:IPR024599
Pfam:PF11934 HOGENOM:HOG000273892 HOVERGEN:HBG017710 GO:GO:0043550
CTD:5934 KO:K16332 OrthoDB:EOG4PNXG9 EMBL:D55627 IPI:IPI00195120
RefSeq:NP_112356.1 UniGene:Rn.11020 ProteinModelPortal:O55081
IntAct:O55081 STRING:O55081 PhosphoSite:O55081 PRIDE:O55081
GeneID:81758 KEGG:rno:81758 InParanoid:O55081 NextBio:615534
Genevestigator:O55081 GermOnline:ENSRNOG00000012153 Uniprot:O55081
Length = 1135
Score = 159 (61.0 bits), Expect = 2.0e-23, Sum P(4) = 2.0e-23
Identities = 31/102 (30%), Positives = 63/102 (61%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 826 PRKTSSLSLFFRKVYYLAGVRLRDLCTKLDISDELRKKIWT-CFEFSIVQCPELMMDRHL 884
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV 469
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 885 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSV 926
Score = 156 (60.0 bits), Expect = 2.0e-23, Sum P(4) = 2.0e-23
Identities = 37/113 (32%), Positives = 66/113 (58%)
Query: 94 LNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLER 148
L YKVLE++ E + L +L+ + FH+ +LAC E+V ++K F + E
Sbjct: 495 LYYKVLESVIEQEQKRLGDMDLSGVLEQDAFHKSLLACCLEVVAFSYKPPGN-FPFIAEI 553
Query: 149 IGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
+ ++ KVI+ FIR E+ L RE+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 554 FDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLAWKTKSPLWDRI 606
Score = 80 (33.2 bits), Expect = 2.0e-23, Sum P(4) = 2.0e-23
Identities = 31/122 (25%), Positives = 55/122 (45%)
Query: 474 DIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKV--SA 531
D+I FYN I+ ++ ++ + M T S +P + SP++V S
Sbjct: 998 DLIQFYNNIYRKQIQTFAMKYSQANSQMDTP---------PLSPYPFVRTGSPRRVQLSQ 1048
Query: 532 THSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNR---RVRG 588
+H +Y+SP + +A++S K +Y + SP K L +IN + + + RG
Sbjct: 1049 SHPIYISPHKN---EAMLSPREKIFYY------FSNSPSKRLREINSMIRTGETPTKKRG 1099
Query: 589 AL 590
L
Sbjct: 1100 IL 1101
Score = 54 (24.1 bits), Expect = 2.0e-23, Sum P(4) = 2.0e-23
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQ 74
VTPVSTA + L T++ L + PS L+
Sbjct: 413 VTPVSTATHSLNRLHTMLAGLRNAPSEKLE 442
>UNIPROTKB|O55081 [details] [associations]
symbol:Rbl2 "Retinoblastoma-like protein 2" species:10116
"Rattus norvegicus" [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 RGD:3541 GO:GO:0005737 GO:GO:0005730 GO:GO:0006355
GO:GO:0003677 GO:GO:0000785 GO:GO:0006351 GO:GO:0016568
GO:GO:0005667 GO:GO:0007049 GO:GO:0051726 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 eggNOG:NOG296920
InterPro:IPR024599 Pfam:PF11934 HOGENOM:HOG000273892
HOVERGEN:HBG017710 GO:GO:0043550 CTD:5934 KO:K16332
OrthoDB:EOG4PNXG9 EMBL:D55627 IPI:IPI00195120 RefSeq:NP_112356.1
UniGene:Rn.11020 ProteinModelPortal:O55081 IntAct:O55081
STRING:O55081 PhosphoSite:O55081 PRIDE:O55081 GeneID:81758
KEGG:rno:81758 InParanoid:O55081 NextBio:615534
Genevestigator:O55081 GermOnline:ENSRNOG00000012153 Uniprot:O55081
Length = 1135
Score = 159 (61.0 bits), Expect = 2.0e-23, Sum P(4) = 2.0e-23
Identities = 31/102 (30%), Positives = 63/102 (61%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 826 PRKTSSLSLFFRKVYYLAGVRLRDLCTKLDISDELRKKIWT-CFEFSIVQCPELMMDRHL 884
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV 469
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 885 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSV 926
Score = 156 (60.0 bits), Expect = 2.0e-23, Sum P(4) = 2.0e-23
Identities = 37/113 (32%), Positives = 66/113 (58%)
Query: 94 LNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLER 148
L YKVLE++ E + L +L+ + FH+ +LAC E+V ++K F + E
Sbjct: 495 LYYKVLESVIEQEQKRLGDMDLSGVLEQDAFHKSLLACCLEVVAFSYKPPGN-FPFIAEI 553
Query: 149 IGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
+ ++ KVI+ FIR E+ L RE+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 554 FDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLAWKTKSPLWDRI 606
Score = 80 (33.2 bits), Expect = 2.0e-23, Sum P(4) = 2.0e-23
Identities = 31/122 (25%), Positives = 55/122 (45%)
Query: 474 DIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKV--SA 531
D+I FYN I+ ++ ++ + M T S +P + SP++V S
Sbjct: 998 DLIQFYNNIYRKQIQTFAMKYSQANSQMDTP---------PLSPYPFVRTGSPRRVQLSQ 1048
Query: 532 THSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNR---RVRG 588
+H +Y+SP + +A++S K +Y + SP K L +IN + + + RG
Sbjct: 1049 SHPIYISPHKN---EAMLSPREKIFYY------FSNSPSKRLREINSMIRTGETPTKKRG 1099
Query: 589 AL 590
L
Sbjct: 1100 IL 1101
Score = 54 (24.1 bits), Expect = 2.0e-23, Sum P(4) = 2.0e-23
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQ 74
VTPVSTA + L T++ L + PS L+
Sbjct: 413 VTPVSTATHSLNRLHTMLAGLRNAPSEKLE 442
>UNIPROTKB|Q08999 [details] [associations]
symbol:RBL2 "Retinoblastoma-like protein 2" species:9606
"Homo sapiens" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0043550 "regulation of lipid kinase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000080 "G1 phase of mitotic cell cycle" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0005737 Pathway_Interaction_DB:foxopathway
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005730 GO:GO:0006355
GO:GO:0003677 GO:GO:0000785 GO:GO:0006351 GO:GO:0016568
GO:GO:0005667 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GO:GO:0000080 eggNOG:NOG296920
InterPro:IPR024599 Pfam:PF11934 HOGENOM:HOG000273892
HOVERGEN:HBG017710 GO:GO:0043550 EMBL:X76061 EMBL:S67171
EMBL:X74594 EMBL:U53220 IPI:IPI00304028 PIR:A49370
RefSeq:NP_005602.3 UniGene:Hs.513609 ProteinModelPortal:Q08999
SMR:Q08999 DIP:DIP-425N IntAct:Q08999 MINT:MINT-102310
STRING:Q08999 PhosphoSite:Q08999 DMDM:116242746 PaxDb:Q08999
PRIDE:Q08999 DNASU:5934 Ensembl:ENST00000262133 GeneID:5934
KEGG:hsa:5934 UCSC:uc002ehi.4 CTD:5934 GeneCards:GC16P053467
HGNC:HGNC:9894 HPA:CAB016547 HPA:HPA019703 MIM:180203
neXtProt:NX_Q08999 PharmGKB:PA34258 InParanoid:Q08999 KO:K16332
OMA:PPGNFPF OrthoDB:EOG4PNXG9 PhylomeDB:Q08999 ChiTaRS:RBL2
GenomeRNAi:5934 NextBio:23132 ArrayExpress:Q08999 Bgee:Q08999
CleanEx:HS_RBL2 Genevestigator:Q08999 GermOnline:ENSG00000103479
Uniprot:Q08999
Length = 1139
Score = 164 (62.8 bits), Expect = 2.4e-23, Sum P(4) = 2.4e-23
Identities = 32/102 (31%), Positives = 64/102 (62%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LAAVR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 830 PRKTSSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 888
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV 469
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 889 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSV 930
Score = 163 (62.4 bits), Expect = 2.4e-23, Sum P(4) = 2.4e-23
Identities = 43/139 (30%), Positives = 75/139 (53%)
Query: 68 KPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRC 122
+P D +N I ++ R + L YKVLE++ E + L +L+ + FHR
Sbjct: 475 QPDEDF--SNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRS 531
Query: 123 MLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLE 182
+LAC E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +E
Sbjct: 532 LLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIE 590
Query: 183 ERLLESMVWEKGSSMYNSL 201
E++L+ + W+ S ++ +
Sbjct: 591 EQILDHLAWKPESPLWEKI 609
Score = 68 (29.0 bits), Expect = 2.4e-23, Sum P(4) = 2.4e-23
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 474 DIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKV--SA 531
D+I FYN I+ +K ++ + N D+ S +P + SP+++ S
Sbjct: 1004 DLIQFYNNIYIKQIKTFAMKYS------QANMDAP-----PLSPYPFVRTGSPRRIQLSQ 1052
Query: 532 THSVYVSPLRTSEMDALISHSSKSYY 557
H VY+SP + M +S K +Y
Sbjct: 1053 NHPVYISPHKNETM---LSPREKIFY 1075
Score = 53 (23.7 bits), Expect = 2.4e-23, Sum P(4) = 2.4e-23
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQ 74
VTPVSTA + L T++ L + PS L+
Sbjct: 416 VTPVSTATHSLSRLHTMLTGLRNAPSEKLE 445
>UNIPROTKB|J9NU49 [details] [associations]
symbol:RB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934
InterPro:IPR015652 PANTHER:PTHR13742:SF10 EMBL:AAEX03013115
EMBL:AAEX03013116 EMBL:AAEX03013117 EMBL:AAEX03013118
Ensembl:ENSCAFT00000045816 Uniprot:J9NU49
Length = 920
Score = 182 (69.1 bits), Expect = 2.8e-23, Sum P(3) = 2.8e-23
Identities = 44/134 (32%), Positives = 76/134 (56%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 436 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDDIFHMSLLACALEVVMATYSRSTS 495
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 496 QNLDTGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAW 555
Query: 192 EKGSSMYNSLTVAR 205
S +++ + A+
Sbjct: 556 LSDSPLFDLIKQAK 569
Score = 172 (65.6 bits), Expect = 2.8e-23, Sum P(3) = 2.8e-23
Identities = 47/179 (26%), Positives = 85/179 (47%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 632 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 691
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 692 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSV 751
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLR 541
F +K +++ T T S + H + P SP ++ + +Y+SPL+
Sbjct: 752 FMQRLKTNILQYA--STRPPTL--SPIPHIPRS---PYKFSSSPLRIPGGN-IYISPLK 802
Score = 46 (21.3 bits), Expect = 2.8e-23, Sum P(3) = 2.8e-23
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADL 73
TPV T M T + L I+ +PS +L
Sbjct: 365 TPVRTVMNTIQQLMMILNSASDQPSENL 392
>RGD|3540 [details] [associations]
symbol:Rb1 "retinoblastoma 1" species:10116 "Rattus norvegicus"
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=ISO] [GO:0001047 "core promoter binding"
evidence=IEA;ISO] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA;ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;ISS;IDA]
[GO:0005667 "transcription factor complex" evidence=ISO] [GO:0005819
"spindle" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006469 "negative regulation of
protein kinase activity" evidence=ISO;ISS] [GO:0007050 "cell cycle
arrest" evidence=IEA;ISO] [GO:0007090 "regulation of S phase of
mitotic cell cycle" evidence=IEA;ISO] [GO:0007265 "Ras protein signal
transduction" evidence=IEA;ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO;ISS] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016605 "PML body" evidence=ISO;ISS] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0019900 "kinase binding"
evidence=ISO;ISS] [GO:0030182 "neuron differentiation" evidence=ISO]
[GO:0031134 "sister chromatid biorientation" evidence=IEA;ISO]
[GO:0031175 "neuron projection development" evidence=IEA;ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA;ISO]
[GO:0034088 "maintenance of mitotic sister chromatid cohesion"
evidence=IEA;ISO] [GO:0035189 "Rb-E2F complex" evidence=IEA;ISO]
[GO:0035914 "skeletal muscle cell differentiation" evidence=ISO]
[GO:0042551 "neuron maturation" evidence=IEA;ISO] [GO:0043353
"enucleate erythrocyte differentiation" evidence=IEA;ISO] [GO:0043550
"regulation of lipid kinase activity" evidence=ISO;ISS] [GO:0045445
"myoblast differentiation" evidence=ISO;ISS] [GO:0045651 "positive
regulation of macrophage differentiation" evidence=IEA;ISO]
[GO:0045786 "negative regulation of cell cycle" evidence=ISO]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IEA;ISO] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0048565 "digestive tract development"
evidence=IEA;ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=IEA;ISO] [GO:0050680 "negative regulation
of epithelial cell proliferation" evidence=IEA;ISO] [GO:0051146
"striated muscle cell differentiation" evidence=IEA;ISO] [GO:0051219
"phosphoprotein binding" evidence=IEA;ISO] [GO:0051301 "cell
division" evidence=IEA;ISO] [GO:0051402 "neuron apoptotic process"
evidence=IEA;ISO] [GO:0051726 "regulation of cell cycle"
evidence=ISO] [GO:0071459 "protein localization to chromosome,
centromeric region" evidence=IEA;ISO] [GO:0071922 "regulation of
cohesin localization to chromatin" evidence=IEA;ISO] [GO:0071930
"negative regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=IEA;ISO] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 RGD:3540 GO:GO:0007265
GO:GO:0051301 GO:GO:0005819 GO:GO:0006469 GO:GO:0016605 GO:GO:0045944
GO:GO:0051402 GO:GO:0007050 GO:GO:0006351 GO:GO:0016568 GO:GO:0019900
GO:GO:0001047 GO:GO:0008134 GO:GO:0051146 GO:GO:0031175 GO:GO:0048565
GO:GO:0071459 GO:GO:0050680 GO:GO:0045445 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0031134
GO:GO:0007090 GO:GO:0045651 GO:GO:0071922 GO:GO:0045842 GO:GO:0045879
GO:GO:0042551 GO:GO:0035189 GO:GO:0043353 GO:GO:0034088 GO:GO:0071930
GO:GO:0048667 eggNOG:NOG296920 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 GO:GO:0043550 InterPro:IPR015030
Pfam:PF08934 CTD:5925 HOGENOM:HOG000136539 HOVERGEN:HBG008967
KO:K06618 InterPro:IPR015652 PANTHER:PTHR13742:SF10 OMA:TNILQYA
OrthoDB:EOG4TXBRB EMBL:D25233 EMBL:L07126 IPI:IPI00192561 PIR:S35544
RefSeq:NP_058741.1 UniGene:Rn.55115 IntAct:P33568 STRING:P33568
PhosphoSite:P33568 PRIDE:P33568 Ensembl:ENSRNOT00000021752
GeneID:24708 KEGG:rno:24708 UCSC:RGD:3540 InParanoid:P33568
NextBio:604187 Genevestigator:P33568 GermOnline:ENSRNOG00000016029
Uniprot:P33568
Length = 920
Score = 178 (67.7 bits), Expect = 4.7e-23, Sum P(3) = 4.7e-23
Identities = 48/144 (33%), Positives = 82/144 (56%)
Query: 71 ADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
A G +D I A++ +L ++L Y+V+E+M +E + L +N + L FH +LA
Sbjct: 424 ASAVGQGCID-IGAQRYKL-GVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLA 481
Query: 126 CSAELVLATHKTVTML----------FLAVLERIGITAFNLSKVIQSFIRHEESLPRELR 175
C+ E+V+AT+ +ML F +L + + AF+ KVI+SFI+ E +L RE+
Sbjct: 482 CALEVVMATYSR-SMLQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKVEANLTREMI 540
Query: 176 RHLNSLEERLLESMVWEKGSSMYN 199
+HL E R++ES+ W S +++
Sbjct: 541 KHLERCEHRIMESLAWLSDSPLFD 564
Score = 173 (66.0 bits), Expect = 4.7e-23, Sum P(3) = 4.7e-23
Identities = 48/180 (26%), Positives = 86/180 (47%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 632 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLENEYELMKDRH 691
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---DHVD-IITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V + D II FYN +
Sbjct: 692 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLIREEEFDSIIVFYNSV 751
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRT 542
F +K +++ T T S + H + P SP ++ + +Y+SPL++
Sbjct: 752 FMQRLKTNILQYA--STRPPTL--SPIPHIPRS---PYKFSSSPLRIPGGN-IYISPLKS 803
Score = 47 (21.6 bits), Expect = 4.7e-23, Sum P(3) = 4.7e-23
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADL 73
TPV T M T + L I+ +PS +L
Sbjct: 366 TPVRTVMNTIQQLMVILNSASDQPSENL 393
>MGI|MGI:97874 [details] [associations]
symbol:Rb1 "retinoblastoma 1" species:10090 "Mus musculus"
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IPI] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006469 "negative regulation of
protein kinase activity" evidence=ISO] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007050 "cell cycle arrest" evidence=IMP]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IMP] [GO:0007346 "regulation of mitotic cell cycle"
evidence=ISO;IMP] [GO:0008134 "transcription factor binding"
evidence=ISO;IPI] [GO:0008285 "negative regulation of cell
proliferation" evidence=IGI;IMP] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016605 "PML body" evidence=ISO]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0019900 "kinase
binding" evidence=ISO] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0031134 "sister chromatid biorientation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=IMP] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0034088 "maintenance of mitotic sister chromatid
cohesion" evidence=ISO] [GO:0035189 "Rb-E2F complex" evidence=IDA]
[GO:0035914 "skeletal muscle cell differentiation" evidence=IMP]
[GO:0042551 "neuron maturation" evidence=IMP] [GO:0043353
"enucleate erythrocyte differentiation" evidence=IGI] [GO:0043550
"regulation of lipid kinase activity" evidence=ISO] [GO:0045445
"myoblast differentiation" evidence=ISO] [GO:0045651 "positive
regulation of macrophage differentiation" evidence=IGI] [GO:0045786
"negative regulation of cell cycle" evidence=IMP] [GO:0045842
"positive regulation of mitotic metaphase/anaphase transition"
evidence=ISO] [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;IMP;IDA] [GO:0048565 "digestive tract
development" evidence=IMP] [GO:0048667 "cell morphogenesis involved
in neuron differentiation" evidence=IMP] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IMP]
[GO:0051146 "striated muscle cell differentiation" evidence=IGI]
[GO:0051219 "phosphoprotein binding" evidence=ISO] [GO:0051301
"cell division" evidence=IMP] [GO:0051402 "neuron apoptotic
process" evidence=IMP] [GO:0051726 "regulation of cell cycle"
evidence=IMP] [GO:0071459 "protein localization to chromosome,
centromeric region" evidence=ISO] [GO:0071922 "regulation of
cohesin localization to chromatin" evidence=ISO] [GO:0071930
"negative regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=IGI] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 MGI:MGI:97874
GO:GO:0007265 GO:GO:0051301 GO:GO:0005819 GO:GO:0006469
GO:GO:0016605 GO:GO:0045944 GO:GO:0051402 GO:GO:0007050
GO:GO:0006351 GO:GO:0016568 GO:GO:0019900 GO:GO:0001047
GO:GO:0008134 GO:GO:0031175 GO:GO:0048565 GO:GO:0071459
GO:GO:0050680 GO:GO:0035914 GO:GO:0045445 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0031134
GO:GO:0007090 GO:GO:0045651 GO:GO:0071922 GO:GO:0045842
GO:GO:0045879 GO:GO:0042551 GO:GO:0035189 GO:GO:0043353
GO:GO:0034088 GO:GO:0071930 GO:GO:0048667 eggNOG:NOG296920
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934 CTD:5925
HOGENOM:HOG000136539 HOVERGEN:HBG008967 KO:K06618
InterPro:IPR015652 PANTHER:PTHR13742:SF10 OMA:TNILQYA
OrthoDB:EOG4TXBRB EMBL:M26391 EMBL:DQ400415 EMBL:BC096525
IPI:IPI00121418 PIR:A33718 RefSeq:NP_033055.2 UniGene:Mm.273862
ProteinModelPortal:P13405 SMR:P13405 DIP:DIP-37637N IntAct:P13405
MINT:MINT-225292 STRING:P13405 PhosphoSite:P13405 PaxDb:P13405
PRIDE:P13405 Ensembl:ENSMUST00000022701 GeneID:19645 KEGG:mmu:19645
InParanoid:Q4VA62 NextBio:296890 Bgee:P13405 CleanEx:MM_RB1
Genevestigator:P13405 GermOnline:ENSMUSG00000022105 Uniprot:P13405
Length = 921
Score = 180 (68.4 bits), Expect = 5.9e-23, Sum P(3) = 5.9e-23
Identities = 46/143 (32%), Positives = 81/143 (56%)
Query: 71 ADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
A+ G +D I ++ +L ++L Y+V+E+M +E + L +N + L FH +LA
Sbjct: 425 ANAVGQGCVD-IGVQRYKL-GVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLA 482
Query: 126 CSAELVLATHKTVTMLFLA---------VLERIGITAFNLSKVIQSFIRHEESLPRELRR 176
C+ E+V+AT+ T+ L +L + + AF+ KVI+SFI+ E +L RE+ +
Sbjct: 483 CALEVVMATYSRSTLQHLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKVEANLTREMIK 542
Query: 177 HLNSLEERLLESMVWEKGSSMYN 199
HL E R++ES+ W S +++
Sbjct: 543 HLERCEHRIMESLAWLSDSPLFD 565
Score = 170 (64.9 bits), Expect = 5.9e-23, Sum P(3) = 5.9e-23
Identities = 48/180 (26%), Positives = 85/180 (47%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T + + + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 633 KPLKSTSLALFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 692
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---DHVD-IITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V + D II FYN +
Sbjct: 693 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLIREEEFDSIIVFYNSV 752
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRT 542
F +K +++ T T S + H + P SP ++ + +Y+SPL++
Sbjct: 753 FMQRLKTNILQYA--STRPPTL--SPIPHIPRS---PYKFSSSPLRIPGGN-IYISPLKS 804
Score = 47 (21.6 bits), Expect = 5.9e-23, Sum P(3) = 5.9e-23
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADL 73
TPV T M T + L I+ +PS +L
Sbjct: 367 TPVRTVMNTIQQLMVILNSASDQPSENL 394
>UNIPROTKB|F1MD46 [details] [associations]
symbol:RB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071930 "negative regulation of transcription involved
in G1/S phase of mitotic cell cycle" evidence=IEA] [GO:0071922
"regulation of cohesin localization to chromatin" evidence=IEA]
[GO:0071459 "protein localization to chromosome, centromeric
region" evidence=IEA] [GO:0051402 "neuron apoptotic process"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051146 "striated muscle
cell differentiation" evidence=IEA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA]
[GO:0048667 "cell morphogenesis involved in neuron differentiation"
evidence=IEA] [GO:0048565 "digestive tract development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045879
"negative regulation of smoothened signaling pathway" evidence=IEA]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0045651 "positive regulation of
macrophage differentiation" evidence=IEA] [GO:0045445 "myoblast
differentiation" evidence=IEA] [GO:0043550 "regulation of lipid
kinase activity" evidence=IEA] [GO:0043353 "enucleate erythrocyte
differentiation" evidence=IEA] [GO:0042551 "neuron maturation"
evidence=IEA] [GO:0035189 "Rb-E2F complex" evidence=IEA]
[GO:0034088 "maintenance of mitotic sister chromatid cohesion"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0019900 "kinase binding" evidence=IEA]
[GO:0016605 "PML body" evidence=IEA] [GO:0007265 "Ras protein
signal transduction" evidence=IEA] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IEA] [GO:0007050 "cell cycle
arrest" evidence=IEA] [GO:0006469 "negative regulation of protein
kinase activity" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0001047 "core promoter binding"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0007265 GO:GO:0051301 GO:GO:0005819
GO:GO:0006469 GO:GO:0016605 GO:GO:0045944 GO:GO:0051402
GO:GO:0007050 GO:GO:0001047 GO:GO:0051146 GO:GO:0031175
GO:GO:0048565 GO:GO:0071459 GO:GO:0050680 GO:GO:0045445
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0031134 GO:GO:0007090 GO:GO:0045651 GO:GO:0071922
GO:GO:0045842 GO:GO:0045879 GO:GO:0042551 GO:GO:0035189
GO:GO:0043353 GO:GO:0034088 GO:GO:0071930 GO:GO:0048667
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934 InterPro:IPR015652
PANTHER:PTHR13742:SF10 OMA:TNILQYA EMBL:DAAA02032883
EMBL:DAAA02032882 EMBL:DAAA02032884 EMBL:DAAA02032885
IPI:IPI00703019 UniGene:Bt.47780 Ensembl:ENSBTAT00000008728
Uniprot:F1MD46
Length = 928
Score = 179 (68.1 bits), Expect = 9.9e-23, Sum P(3) = 9.9e-23
Identities = 46/134 (34%), Positives = 76/134 (56%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHK---- 136
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+
Sbjct: 444 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSMS 503
Query: 137 ----TVTML-FLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
T T L F +L + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 504 QSLDTGTDLSFPWILNVFNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAW 563
Query: 192 EKGSSMYNSLTVAR 205
S +++ + A+
Sbjct: 564 LSDSPLFDLIKQAK 577
Score = 170 (64.9 bits), Expect = 9.9e-23, Sum P(3) = 9.9e-23
Identities = 47/178 (26%), Positives = 84/178 (47%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 640 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 699
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 700 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSV 759
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPL 540
F +K +++ T T S + H + P SP ++ + +Y+SPL
Sbjct: 760 FMQRLKTNILQYA--STRPPTL--SPIPHIPRS---PYKFSSSPLRIPGGN-IYISPL 809
Score = 46 (21.3 bits), Expect = 9.9e-23, Sum P(3) = 9.9e-23
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADL 73
TPV T M T + L I+ +PS +L
Sbjct: 373 TPVRTVMNTIQQLMMILNSASDQPSENL 400
>UNIPROTKB|F1PQ32 [details] [associations]
symbol:RB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934
InterPro:IPR015652 PANTHER:PTHR13742:SF10 OMA:TNILQYA
EMBL:AAEX03013115 EMBL:AAEX03013116 EMBL:AAEX03013117
EMBL:AAEX03013118 Ensembl:ENSCAFT00000007150 Uniprot:F1PQ32
Length = 928
Score = 176 (67.0 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
Identities = 41/131 (31%), Positives = 74/131 (56%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTS--LFHRCMLACSAELVLATHKTVT---- 139
QR ++L Y+V+E+M + + + L + +FH +LAC+ E+V+AT+ T
Sbjct: 447 QRYKLGVRLYYRVMESMLKSRLSIQNFSKLLNDDIFHMSLLACALEVVMATYSRSTSQNL 506
Query: 140 -----MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKG 194
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 507 DTGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSD 566
Query: 195 SSMYNSLTVAR 205
S +++ + A+
Sbjct: 567 SPLFDLIKQAK 577
Score = 172 (65.6 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
Identities = 47/179 (26%), Positives = 85/179 (47%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 640 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 699
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 700 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSV 759
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLR 541
F +K +++ T T S + H + P SP ++ + +Y+SPL+
Sbjct: 760 FMQRLKTNILQYA--STRPPTL--SPIPHIPRS---PYKFSSSPLRIPGGN-IYISPLK 810
Score = 46 (21.3 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADL 73
TPV T M T + L I+ +PS +L
Sbjct: 376 TPVRTVMNTIQQLMMILNSASDQPSENL 403
>UNIPROTKB|E2RIG3 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043550 "regulation of lipid kinase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0005737 GO:GO:0005730 GO:GO:0005667
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 GO:GO:0043550 CTD:5934 KO:K16332 OMA:PPGNFPF
EMBL:AAEX03001603 RefSeq:XP_535303.2 Ensembl:ENSCAFT00000015343
GeneID:478127 KEGG:cfa:478127 Uniprot:E2RIG3
Length = 1139
Score = 162 (62.1 bits), Expect = 5.7e-22, Sum P(3) = 5.7e-22
Identities = 32/107 (29%), Positives = 64/107 (59%)
Query: 363 GGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLF 422
G P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L
Sbjct: 824 GSSIRPRKTSSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELM 882
Query: 423 FNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV 469
+ H+DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 883 MDRHLDQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSV 929
Score = 161 (61.7 bits), Expect = 5.7e-22, Sum P(3) = 5.7e-22
Identities = 38/113 (33%), Positives = 66/113 (58%)
Query: 94 LNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLER 148
L YKVLE++ E + L +L+ + FHR +LAC E+V ++K F + E
Sbjct: 497 LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEI 555
Query: 149 IGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
+ ++ KVI+ FIR E+ L RE+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 556 FDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWDRI 608
Score = 69 (29.3 bits), Expect = 5.7e-22, Sum P(3) = 5.7e-22
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 474 DIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKV--SA 531
D+I FYN I+ +K AMK ++ + + S +P + SP+++ S
Sbjct: 1003 DLIQFYNNIYIKQIKTF---------AMKYSQ-ANIMDAPPLSPYPFVRTGSPRRIQLSQ 1052
Query: 532 THSVYVSPLRTSEMDALISHSSKSYY 557
H VY+SP + M +S K +Y
Sbjct: 1053 NHPVYISPHKNETM---LSPREKIFY 1075
Score = 62 (26.9 bits), Expect = 7.6e-12, Sum P(3) = 7.6e-12
Identities = 21/77 (27%), Positives = 33/77 (42%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCT 104
VTPVSTA + L T++ L + PS L+ + Q LK Y++ C
Sbjct: 416 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMYEIYSQHCQ 475
Query: 105 AEAQVLHAKNLTSLFHR 121
+ ++K + S R
Sbjct: 476 PDEDFSNSKEIASKHFR 492
>FB|FBgn0015799 [details] [associations]
symbol:Rbf "Retinoblastoma-family protein" species:7227
"Drosophila melanogaster" [GO:0035189 "Rb-E2F complex"
evidence=IDA;TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP;IDA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0051101
"regulation of DNA binding" evidence=IDA] [GO:0051726 "regulation
of cell cycle" evidence=ISS;IMP] [GO:0000080 "G1 phase of mitotic
cell cycle" evidence=IMP] [GO:0008156 "negative regulation of DNA
replication" evidence=IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0003677 "DNA binding" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007307 "eggshell
chorion gene amplification" evidence=TAS] [GO:0007113 "endomitotic
cell cycle" evidence=TAS] [GO:0042023 "DNA endoreduplication"
evidence=IMP] [GO:0031523 "Myb complex" evidence=IDA] [GO:0000785
"chromatin" evidence=IDA] [GO:0045749 "negative regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0010629 "negative regulation of gene expression" evidence=IMP]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0007095 GO:GO:0043066 GO:GO:0008630
GO:GO:0008285 EMBL:AE014298 GO:GO:0000785 GO:GO:0006351
GO:GO:0000122 GO:GO:0044212 GO:GO:0045749 GO:GO:0007113
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0000080 GO:GO:0008156 GO:GO:0051101 GO:GO:0042023
GO:GO:0031523 GO:GO:0007307 GO:GO:0071922 GO:GO:0035189
GO:GO:0034088 Reactome:REACT_118133 EMBL:AL031583 ChiTaRS:Rb97D
EMBL:AY047549 EMBL:AY089532 EMBL:X96975 PIR:T13480
RefSeq:NP_525036.2 UniGene:Dm.4654 ProteinModelPortal:Q24472
SMR:Q24472 IntAct:Q24472 STRING:Q24472 PaxDb:Q24472
EnsemblMetazoa:FBtr0070146 GeneID:31027 KEGG:dme:Dmel_CG7413
CTD:31027 FlyBase:FBgn0015799 eggNOG:NOG296920
GeneTree:ENSGT00530000063235 InParanoid:Q24472 KO:K04681
OMA:CCIDLIY OrthoDB:EOG47D7X2 PhylomeDB:Q24472 GenomeRNAi:31027
NextBio:771579 Bgee:Q24472 GermOnline:CG7413 InterPro:IPR024599
Pfam:PF11934 Uniprot:Q24472
Length = 845
Score = 181 (68.8 bits), Expect = 3.5e-21, Sum P(2) = 3.5e-21
Identities = 59/223 (26%), Positives = 105/223 (47%)
Query: 374 INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILC 433
+ I K+ L +RI + L L ++ ES++ + + ++ T L + H+DQ I+C
Sbjct: 582 LQIFLRKVYLLGWLRIQKLCSELSLCEKTPESIWHIF-EHSITHETELMKDRHLDQNIMC 640
Query: 434 CFYGVAKISQL-NLTFKEIIYNYGKQPQCKPQVFRSVFDHV---------DIITFYNKIF 483
Y ++ ++ + F +I+ Y QPQ V+R VF + DII FYN +
Sbjct: 641 AIYIYIRVKRMEDPKFSDIMRAYRNQPQAVNSVYREVFIDINEDGEPKVKDIIHFYNHTY 700
Query: 484 APTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRTS 543
P ++ +++ V T + R S++ S P PKKV+ +HS++VS + +
Sbjct: 701 VPLMRQFVIDYLNV-TPDVSGRASDLQ----LSPHPKERAAQPKKVTQSHSLFVSQMSKN 755
Query: 544 EMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNRRV 586
E+ S + Y C SP KDL +N ++ +R+
Sbjct: 756 EIQQ--SPNQMVYSFC-------RSPAKDLQAMNEKVRGGKRM 789
Score = 153 (58.9 bits), Expect = 3.5e-21, Sum P(2) = 3.5e-21
Identities = 34/91 (37%), Positives = 54/91 (59%)
Query: 118 LFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRH---EESLPREL 174
+F+ ++AC ELVL +KT + F VL+ I+AF K+I+ +RH E L R L
Sbjct: 475 IFNITLMACCVELVLEAYKT-ELKFPWVLDCFSISAFEFQKIIEIVVRHGSHEGCLNRSL 533
Query: 175 RRHLNSLEERLLESMVWEKGSSMYNSLTVAR 205
+HLNS+EE LE + W + S+++ + A+
Sbjct: 534 IKHLNSIEETCLERLAWARNSTVWEMIASAQ 564
>ZFIN|ZDB-GENE-040428-1 [details] [associations]
symbol:rb1 "retinoblastoma 1" species:7955 "Danio
rerio" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031290 "retinal ganglion
cell axon guidance" evidence=IMP] [GO:0021554 "optic nerve
development" evidence=IMP] [GO:0007601 "visual perception"
evidence=IMP] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 ZFIN:ZDB-GENE-040428-1 GO:GO:0005634 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0031290 GO:GO:0021554 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934
EMBL:CU694531 IPI:IPI00501767 Ensembl:ENSDART00000024309
ArrayExpress:F1Q9D6 Bgee:F1Q9D6 Uniprot:F1Q9D6
Length = 903
Score = 178 (67.7 bits), Expect = 3.1e-20, Sum P(4) = 3.1e-20
Identities = 49/208 (23%), Positives = 96/208 (46%)
Query: 374 INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILC 433
+++ + K+ ++A +R+ + L S E + + TL L + H+DQ+I+
Sbjct: 631 LSLFYKKLYRMAYLRLKMLFSNLLTSHPEMEPIIWTLLQHTLQNEYELMRDRHLDQLIMS 690
Query: 434 CFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKIFAPTVKP 489
Y + K+ ++L FK I+ Y + P + F+ V + II FYN +F +K
Sbjct: 691 AMYAICKVKNVDLRFKTIVTAYKELPNTNQETFKRVLIREGQYDSIIVFYNLVFMQKLKT 750
Query: 490 LLVELGPVGTAMKTNRDSEVNHNNDASVFPALP-DMSPKKVSATHSVYVSPLRTSEMDAL 548
+++ ++ + S + H P P SP +V +++VYVSPL++S + L
Sbjct: 751 NILQY----SSPRPPPLSPIPH------IPCSPYKNSPLRVPGSNNVYVSPLKSSRVSPL 800
Query: 549 ISHSSKSYYACVGESTHAYSPFKDLTDI 576
+ +GES + F+ + +
Sbjct: 801 VMTPRSRILISIGESFGSADKFQKINQM 828
Score = 104 (41.7 bits), Expect = 3.1e-20, Sum P(4) = 3.1e-20
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 140 MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 199
+ F +L + AF+ KVI+SFI+ E +L ++ +HL E ++ES+ W S +++
Sbjct: 508 LCFPWILSVFQLPAFDFYKVIESFIKAEPTLKHDMVKHLEQCEHVIMESLAWRADSPLFD 567
Query: 200 SLTVAR 205
L +R
Sbjct: 568 LLKQSR 573
Score = 85 (35.0 bits), Expect = 3.1e-20, Sum P(4) = 3.1e-20
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 93 KLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATH 135
+L YKV+E+M +E + L +N + L FH +LAC+ E+V+AT+
Sbjct: 437 QLYYKVMESMLKSEEKRLSVQNFSKLLNNAAFHTSLLACALEVVIATY 484
Score = 44 (20.5 bits), Expect = 3.1e-20, Sum P(4) = 3.1e-20
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADL 73
TP+ AMT+ + LR + +PS++L
Sbjct: 359 TPIRAAMTSIQQLRGDLTSGSDQPSSNL 386
Score = 39 (18.8 bits), Expect = 4.2e-09, Sum P(3) = 4.2e-09
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 96 YKVLETMCTAEAQVLH--AKNLTSLFHRCM 123
YKV+E+ AE + H K+L H M
Sbjct: 525 YKVIESFIKAEPTLKHDMVKHLEQCEHVIM 554
>FB|FBgn0038390 [details] [associations]
symbol:Rbf2 "Retinoblastoma-family protein 2" species:7227
"Drosophila melanogaster" [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0001078 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IPI] [GO:0035189 "Rb-E2F complex"
evidence=IDA;TAS] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0031523 "Myb complex" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 EMBL:AE014297
GO:GO:0000122 GO:GO:0044212 GO:GO:0045749 Gene3D:1.10.472.10
InterPro:IPR013763 SUPFAM:SSF47954 GO:GO:0031523 GO:GO:0035189
GeneTree:ENSGT00530000063235 KO:K04681 InterPro:IPR024599
Pfam:PF11934 HSSP:P06400 FlyBase:FBgn0038390 EMBL:AF197059
EMBL:AY071301 RefSeq:NP_524372.1 UniGene:Dm.2418 SMR:Q9VF04
IntAct:Q9VF04 STRING:Q9VF04 EnsemblMetazoa:FBtr0083213 GeneID:41941
KEGG:dme:Dmel_CG5083 UCSC:CG5083-RA CTD:41941 InParanoid:Q9VF04
OMA:ICLRKFY GenomeRNAi:41941 NextBio:826382 Uniprot:Q9VF04
Length = 783
Score = 143 (55.4 bits), Expect = 6.9e-14, Sum P(2) = 6.9e-14
Identities = 36/120 (30%), Positives = 61/120 (50%)
Query: 372 TGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQII 431
TG +IC K LA R+ + + L L + ++ L + + L N H+DQ++
Sbjct: 561 TGSSICLRKFYGLANRRLLLLCKSLCLVDSFPQ-IWHLAEHSFTLESSRLLRNRHLDQLL 619
Query: 432 LCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKIFAPTV 487
LC + ++ +L+LTF II +Y +QP + +R V DIITFYN ++ ++
Sbjct: 620 LCAIHLHVRLEKLHLTFSMIIQHYRRQPHFRRSAYREVSLGNGQTADIITFYNSVYVQSM 679
Score = 122 (48.0 bits), Expect = 6.9e-14, Sum P(2) = 6.9e-14
Identities = 33/102 (32%), Positives = 56/102 (54%)
Query: 108 QVLHAKNLTSLFHRCMLACSAELVLATH-KTVTML-FLAVLERIGITAFNLSKVIQSFIR 165
Q++ + LT+ +LAC EL L H K V L F VL + A++ K+++ +R
Sbjct: 447 QLMKQRKLTA----ALLACCLELALHVHHKLVEGLRFPFVLHCFSLDAYDFQKILELVVR 502
Query: 166 HEES-LPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARP 206
++ L REL +HL+ +EE L+S+++ K S ++ L P
Sbjct: 503 YDHGFLGRELIKHLDVVEEMCLDSLIFRKSSQLWWELNQRLP 544
>UNIPROTKB|F1NEZ1 [details] [associations]
symbol:F1NEZ1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002720
Pfam:PF01858 GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10
InterPro:IPR013763 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 EMBL:AADN02038292 EMBL:AADN02038287
EMBL:AADN02038288 EMBL:AADN02038289 EMBL:AADN02038290
EMBL:AADN02038291 IPI:IPI00820273 Ensembl:ENSGALT00000039692
Uniprot:F1NEZ1
Length = 1120
Score = 190 (71.9 bits), Expect = 1.7e-13, Sum P(3) = 1.7e-13
Identities = 52/161 (32%), Positives = 90/161 (55%)
Query: 47 PVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQ-RRLEALKLNYKVLETMCTA 105
P + + K + + C A+ + +NL ++ ++ RR E L YKVLE++
Sbjct: 454 PSQSIASRVKEMYEVYC---QSMQAEEEFSNLSKDVASKHFRRAEVLY--YKVLESVIEQ 508
Query: 106 EAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVI 160
E + L +L+++ FHR +LAC E+V T+K + F + E I ++ KVI
Sbjct: 509 ERRRLGDTDLSAVLEQDVFHRSLLACCLEIVTFTYK-LPGSFPFITEIFDIPVYHFYKVI 567
Query: 161 QSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
+ FIR E+ L RE+ +HLN +EE++LESM W++ S +++ +
Sbjct: 568 EVFIRAEDGLCREVVKHLNHIEEQILESMAWKQESILWDRI 608
Score = 80 (33.2 bits), Expect = 1.7e-13, Sum P(3) = 1.7e-13
Identities = 27/86 (31%), Positives = 43/86 (50%)
Query: 474 DIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKV--SA 531
D+I FYN I+ +K ++ GT D+ S +P++ SP++V S
Sbjct: 985 DLIQFYNSIYIEQIKEFALKYTSSGT------DTP-----PLSPYPSVRISSPRRVQLSQ 1033
Query: 532 THSVYVSPLRTSEMDALISHSSKSYY 557
H+VY+SP + + AL SH K +Y
Sbjct: 1034 NHAVYISPHKN--VSAL-SHREKIFY 1056
Score = 37 (18.1 bits), Expect = 1.7e-13, Sum P(3) = 1.7e-13
Identities = 13/50 (26%), Positives = 21/50 (42%)
Query: 411 PKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQ 460
P +TL + + Q + G+A + +TF + N G QPQ
Sbjct: 723 PGQTLVTVATATVTANNGQTVTIPVQGIANENG-GITFFPVQVNVGAQPQ 771
>DICTYBASE|DDB_G0290551 [details] [associations]
symbol:rblA "retinoblastoma-like protein"
species:44689 "Dictyostelium discoideum" [GO:0045165 "cell fate
commitment" evidence=IGI] [GO:0010628 "positive regulation of gene
expression" evidence=IMP] [GO:0051330 "G1 phase of meiotic cell
cycle" evidence=IMP] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0045786 "negative regulation of cell
cycle" evidence=ISS] [GO:0044212 "transcription regulatory region
DNA binding" evidence=ISS] [GO:0005667 "transcription factor
complex" evidence=ISS] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 dictyBase:DDB_G0290551
GenomeReviews:CM000154_GR GO:GO:0005667 GO:GO:0000122
Gene3D:1.10.472.10 InterPro:IPR013763 SUPFAM:SSF47954 GO:GO:0045786
EMBL:AAFI02000164 GO:GO:0030332 eggNOG:NOG296920 InterPro:IPR024599
Pfam:PF11934 EMBL:AB211596 RefSeq:XP_635645.1
ProteinModelPortal:Q54FX2 EnsemblProtists:DDB0232004 GeneID:8627717
KEGG:ddi:DDB_G0290551 InParanoid:Q54FX2 OMA:AWCLLEN GO:GO:0051330
Uniprot:Q54FX2
Length = 1312
Score = 124 (48.7 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 29/122 (23%), Positives = 65/122 (53%)
Query: 85 EQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT 139
++R+ A++L Y +LE + E + N+ L FH+ +L+ S E++ +K
Sbjct: 710 QRRKNMAIQLYYCLLEKLIKFEQNT--SSNINVLLNHEDFHKSLLSNSFEIIAYVYKMEG 767
Query: 140 MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 199
+ F + + F+ ++I ++ + LP+ L +H + +EE++LE VW S++++
Sbjct: 768 LYFPHFINVFKLHPFSYLRLIDLVLKVDADLPKLLAQHFSQIEEKILEKYVWSNNSTVFS 827
Query: 200 SL 201
++
Sbjct: 828 TI 829
Score = 100 (40.3 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 21/73 (28%), Positives = 39/73 (53%)
Query: 380 KINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVA 439
K++ L + ++ + LS +Y + K +++ T LF N ID +++C Y +
Sbjct: 896 KVSTLIIAKCRKLIHAMGLSSDYVVQIYQVMIKILIDE-TLLFKNREIDVLLICSIYAIC 954
Query: 440 KISQLNLTFKEII 452
K++ N+TFK II
Sbjct: 955 KVNSKNITFKAII 967
Score = 59 (25.8 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 27/90 (30%), Positives = 42/90 (46%)
Query: 499 TAMKTNRDSEVNHNNDA-SVFPALPDMSPKK-VSATHSVYVSPLRTSEMDALISHS--SK 554
T K ++ N NN+ + F + +SP+K V+ S V+ + T + + H+ S
Sbjct: 1087 TPTKNQNNNPYNSNNNTPNKFSSSIPLSPQKGVNYNSSFSVNSMVT--ISPMKQHTPISS 1144
Query: 555 SYYACVGESTHAYSPFKDLTDINHRLNSNR 584
SY V A SP K+L IN LN +
Sbjct: 1145 SYTYIV-----AKSPSKELFQINQCLNKKK 1169
Score = 55 (24.4 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 474 DIITFYNKIFAPTVKPLLVEL 494
DII FYNKIF + P + E+
Sbjct: 1029 DIILFYNKIFLTKMDPYIHEV 1049
Score = 48 (22.0 bits), Expect = 0.00042, Sum P(4) = 0.00042
Identities = 24/123 (19%), Positives = 46/123 (37%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTA 105
TP+S +T WL+ I P+ L N++ + Q+ E K+ +V ++
Sbjct: 628 TPISLTLTLESWLKVEIQNYRD-PNPSLNLINILKSADQPQQTSEVDKMIERV-SSLTNN 685
Query: 106 EAQVLHAKNLTSLFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIR 165
+ + H+ E+ L+ +LE++ N S I +
Sbjct: 686 TDSLFSIGGIDD--HQQQQQQQQEVKQRRKNMAIQLYYCLLEKLIKFEQNTSSNINVLLN 743
Query: 166 HEE 168
HE+
Sbjct: 744 HED 746
>UNIPROTKB|I3LUP8 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043550 "regulation of lipid kinase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 Pfam:PF01857 GO:GO:0005737
GO:GO:0005730 GO:GO:0005667 GO:GO:0051726 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GeneTree:ENSGT00530000063235 GO:GO:0043550
Ensembl:ENSSSCT00000026766 OMA:AENDSPS Uniprot:I3LUP8
Length = 411
Score = 160 (61.4 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 31/102 (30%), Positives = 63/102 (61%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 101 PRKTSSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 159
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV 469
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 160 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSV 201
Score = 74 (31.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 24/86 (27%), Positives = 43/86 (50%)
Query: 474 DIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKV--SA 531
D+I FYN I+ +K A+K ++ + V S +P + SP+++ S
Sbjct: 275 DLIQFYNSIYIKQIKTF---------ALKYSQ-ANVMDAPPLSPYPFIRSGSPRRIQLSQ 324
Query: 532 THSVYVSPLRTSEMDALISHSSKSYY 557
H VY+SP ++ +A++S K +Y
Sbjct: 325 NHPVYISPHKS---EAMLSPREKIFY 347
>UNIPROTKB|B7Z913 [details] [associations]
symbol:RBL2 "cDNA FLJ53278, highly similar to
Retinoblastoma-like protein 2" species:9606 "Homo sapiens"
[GO:0005634 "nucleus" evidence=IEA] [GO:0051726 "regulation of cell
cycle" evidence=IEA] InterPro:IPR002720 Pfam:PF01858 GO:GO:0005634
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SUPFAM:SSF47954
UniGene:Hs.513609 HGNC:HGNC:9894 ChiTaRS:RBL2 EMBL:AC007342
EMBL:AK304283 IPI:IPI00922321 SMR:B7Z913 STRING:B7Z913
Ensembl:ENST00000544545 UCSC:uc010vgw.2 Uniprot:B7Z913
Length = 518
Score = 163 (62.4 bits), Expect = 6.3e-11, Sum P(3) = 6.3e-11
Identities = 43/139 (30%), Positives = 75/139 (53%)
Query: 68 KPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRC 122
+P D +N I ++ R + L YKVLE++ E + L +L+ + FHR
Sbjct: 259 QPDEDF--SNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRS 315
Query: 123 MLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLE 182
+LAC E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +E
Sbjct: 316 LLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIE 374
Query: 183 ERLLESMVWEKGSSMYNSL 201
E++L+ + W+ S ++ +
Sbjct: 375 EQILDHLAWKPESPLWEKI 393
Score = 54 (24.1 bits), Expect = 6.3e-11, Sum P(3) = 6.3e-11
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 525 SPKKV--SATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNS 582
SP+++ S H VY+SP + M +S K +Y + SP K L +IN + +
Sbjct: 423 SPRRIQLSQNHPVYISPHKNETM---LSPREKIFYY------FSNSPSKRLREINSMIRT 473
Query: 583 NR---RVRGAL 590
+ RG L
Sbjct: 474 GETPTKKRGIL 484
Score = 53 (23.7 bits), Expect = 6.3e-11, Sum P(3) = 6.3e-11
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQ 74
VTPVSTA + L T++ L + PS L+
Sbjct: 200 VTPVSTATHSLSRLHTMLTGLRNAPSEKLE 229
>UNIPROTKB|F5H837 [details] [associations]
symbol:RBL2 "Retinoblastoma-like protein 2" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002720
Pfam:PF01858 GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10
InterPro:IPR013763 SUPFAM:SSF47954 InterPro:IPR024599 Pfam:PF11934
HGNC:HGNC:9894 ChiTaRS:RBL2 EMBL:AC007342 IPI:IPI01011272
Ensembl:ENST00000544405 ArrayExpress:F5H837 Bgee:F5H837
Uniprot:F5H837
Length = 639
Score = 163 (62.4 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 43/139 (30%), Positives = 75/139 (53%)
Query: 68 KPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRC 122
+P D +N I ++ R + L YKVLE++ E + L +L+ + FHR
Sbjct: 401 QPDEDF--SNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRS 457
Query: 123 MLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLE 182
+LAC E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +E
Sbjct: 458 LLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIE 516
Query: 183 ERLLESMVWEKGSSMYNSL 201
E++L+ + W+ S ++ +
Sbjct: 517 EQILDHLAWKPESPLWEKI 535
Score = 53 (23.7 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQ 74
VTPVSTA + L T++ L + PS L+
Sbjct: 342 VTPVSTATHSLSRLHTMLTGLRNAPSEKLE 371
>WB|WBGene00003020 [details] [associations]
symbol:lin-35 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0018991 "oviposition" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IGI;IMP] [GO:0000003
"reproduction" evidence=IGI;IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IGI;IMP] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IGI] [GO:0016479 "negative
regulation of transcription from RNA polymerase I promoter"
evidence=ISS] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IGI] [GO:0071850 "mitotic cell cycle arrest" evidence=IGI]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0018991 GO:GO:0040010 GO:GO:0002119 GO:GO:0010171
GO:GO:0040018 Gene3D:1.10.472.10 InterPro:IPR013763 SUPFAM:SSF47954
GO:GO:0040027 GO:GO:0071850 GO:GO:0048557 EMBL:FO080198
GO:GO:0016479 GeneTree:ENSGT00530000063235 KO:K04681
InterPro:IPR024599 Pfam:PF11934 HSSP:P06400 EMBL:AF116529
PIR:T34024 RefSeq:NP_491686.1 UniGene:Cel.5952
ProteinModelPortal:G5EDT1 SMR:G5EDT1 IntAct:G5EDT1
EnsemblMetazoa:C32F10.2 GeneID:172249 KEGG:cel:CELE_C32F10.2
CTD:172249 WormBase:C32F10.2 OMA:PWILNAL NextBio:874671
Uniprot:G5EDT1
Length = 961
Score = 120 (47.3 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 26/85 (30%), Positives = 47/85 (55%)
Query: 385 AAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQL 444
AA R+ + +R+ + + + + L N T +F + H+DQI+LCC + + KI++
Sbjct: 756 AARRLQDLTDRVSMGARAKSQCWSLFDYLLRND-TLIFMDRHLDQILLCCVFVIMKINES 814
Query: 445 NLTFKEIIYNYGKQPQCKPQVFRSV 469
++ F EI+ Y +Q V+RSV
Sbjct: 815 SMLFTEIMAQYRRQSANSLLVYRSV 839
Score = 91 (37.1 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 35/139 (25%), Positives = 67/139 (48%)
Query: 70 SADLQGANLMDNI----WAEQRRLEALKLNYKVLETMCTAEAQV-LHAKNLTSLFHR--- 121
SA+L G + +NI + ++ LE + L + +E + AE + + ++L ++ R
Sbjct: 554 SAEL-GETINENIPKYHYNVRKELELVFLIF--MEKIIVAELKKKVREEDLLNVIRREEF 610
Query: 122 --CMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLN 179
+ EL+L ++ F E G+ F KVI I HE+ L R++ +H +
Sbjct: 611 LDSVFCFCVELILVSNG-YDRPFPWSAELCGVHPFMFHKVIDLMITHEKQLSRQMVQHFS 669
Query: 180 SLEERLLESMVWEKGSSMY 198
+EE ++E W+ S ++
Sbjct: 670 RIEETVIEYFSWKSDSPLW 688
Score = 40 (19.1 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 473 VDIITFYNKIFAPTVKPLLVEL 494
VDII +YN F +K ++ ++
Sbjct: 874 VDIIKYYNIEFRDRIKYIIGQI 895
>UNIPROTKB|G5EDT1 [details] [associations]
symbol:lin-35 "Synthetic multivulva protein LIN-35 Rb"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
GO:GO:0040007 GO:GO:0018991 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040018 Gene3D:1.10.472.10 InterPro:IPR013763
SUPFAM:SSF47954 GO:GO:0040027 GO:GO:0071850 GO:GO:0048557
EMBL:FO080198 GO:GO:0016479 GeneTree:ENSGT00530000063235 KO:K04681
InterPro:IPR024599 Pfam:PF11934 HSSP:P06400 EMBL:AF116529
PIR:T34024 RefSeq:NP_491686.1 UniGene:Cel.5952
ProteinModelPortal:G5EDT1 SMR:G5EDT1 IntAct:G5EDT1
EnsemblMetazoa:C32F10.2 GeneID:172249 KEGG:cel:CELE_C32F10.2
CTD:172249 WormBase:C32F10.2 OMA:PWILNAL NextBio:874671
Uniprot:G5EDT1
Length = 961
Score = 120 (47.3 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 26/85 (30%), Positives = 47/85 (55%)
Query: 385 AAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQL 444
AA R+ + +R+ + + + + L N T +F + H+DQI+LCC + + KI++
Sbjct: 756 AARRLQDLTDRVSMGARAKSQCWSLFDYLLRND-TLIFMDRHLDQILLCCVFVIMKINES 814
Query: 445 NLTFKEIIYNYGKQPQCKPQVFRSV 469
++ F EI+ Y +Q V+RSV
Sbjct: 815 SMLFTEIMAQYRRQSANSLLVYRSV 839
Score = 91 (37.1 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 35/139 (25%), Positives = 67/139 (48%)
Query: 70 SADLQGANLMDNI----WAEQRRLEALKLNYKVLETMCTAEAQV-LHAKNLTSLFHR--- 121
SA+L G + +NI + ++ LE + L + +E + AE + + ++L ++ R
Sbjct: 554 SAEL-GETINENIPKYHYNVRKELELVFLIF--MEKIIVAELKKKVREEDLLNVIRREEF 610
Query: 122 --CMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLN 179
+ EL+L ++ F E G+ F KVI I HE+ L R++ +H +
Sbjct: 611 LDSVFCFCVELILVSNG-YDRPFPWSAELCGVHPFMFHKVIDLMITHEKQLSRQMVQHFS 669
Query: 180 SLEERLLESMVWEKGSSMY 198
+EE ++E W+ S ++
Sbjct: 670 RIEETVIEYFSWKSDSPLW 688
Score = 40 (19.1 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 473 VDIITFYNKIFAPTVKPLLVEL 494
VDII +YN F +K ++ ++
Sbjct: 874 VDIIKYYNIEFRDRIKYIIGQI 895
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.133 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 633 582 0.00082 120 3 11 22 0.37 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 43
No. of states in DFA: 623 (66 KB)
Total size of DFA: 332 KB (2168 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 46.69u 0.12s 46.81t Elapsed: 00:00:03
Total cpu time: 46.70u 0.12s 46.82t Elapsed: 00:00:03
Start: Sat May 11 07:58:52 2013 End: Sat May 11 07:58:55 2013