BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046343
(633 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255578241|ref|XP_002529988.1| conserved hypothetical protein [Ricinus communis]
gi|254789790|sp|B9SVG9.1|RBR_RICCO RecName: Full=Retinoblastoma-related protein
gi|223530511|gb|EEF32393.1| conserved hypothetical protein [Ricinus communis]
Length = 1020
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/717 (62%), Positives = 489/717 (68%), Gaps = 155/717 (21%)
Query: 9 AVNITGAKRKFDSLASPVKTITSPLSPHHS-----------STSKMVVTPVSTAMTTAKW 57
A+++TG KRKFD ++SP KTITSPLSPH S + S+M TPVSTAMTTAKW
Sbjct: 367 AISVTGTKRKFDQISSPTKTITSPLSPHRSPASHTNGILGSTNSRMAATPVSTAMTTAKW 426
Query: 58 LRTIICPLPSKPS-----------------------------------------ADLQGA 76
LRT+I PLPSKPS LQ
Sbjct: 427 LRTVISPLPSKPSPQLERFLASCDRDVTNDVIRRAHIILEAIFPSNALGERCVTGSLQST 486
Query: 77 NLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELV 131
NLMDNIWAEQRRLEALKL Y+VLE MCTAEAQ+LHA NLTSL FHRCMLACSAELV
Sbjct: 487 NLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQILHATNLTSLLTNERFHRCMLACSAELV 546
Query: 132 LATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
LATHKTVTMLF AVLER GITAF+LSKVI+SFIRHEESLPRELRRHLNSLEERLLESMVW
Sbjct: 547 LATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVW 606
Query: 192 EKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYEN 250
EKGSSMYNSLTVARP+LSAEIN LG
Sbjct: 607 EKGSSMYNSLTVARPSLSAEINRLGL---------------------------------- 632
Query: 251 LPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFY 310
L PMPSLDAIA+HINFSSGGL P+ S+ KHE SP
Sbjct: 633 ---------------LAEPMPSLDAIAVHINFSSGGLPPLSSVSKHEISP---------- 667
Query: 311 ANCYGELVT-----DDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRS 360
G++ + DYRSVLVERN+FTS VKD LL NLKSK PPPL PTR
Sbjct: 668 -GQNGDIRSPKRPCTDYRSVLVERNSFTSPVKDRLLAFTNLKSKLPPPPLQSAFASPTRP 726
Query: 361 NPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQ-IRESVYCLCPKRTLNQRT 419
NPGGGGE CAETGINI F KINKLAAVRIN MVERLQ SQQ IRE+VY L ++ L+Q+T
Sbjct: 727 NPGGGGETCAETGINIFFSKINKLAAVRINGMVERLQQSQQHIRENVYRLF-QQVLSQQT 785
Query: 420 SLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------- 470
SLFFN HIDQIILCCFYGVAKIS++NLTF+EIIYNY KQPQCKPQVFRSVF
Sbjct: 786 SLFFNRHIDQIILCCFYGVAKISKVNLTFREIIYNYRKQPQCKPQVFRSVFVDWSSARHN 845
Query: 471 -----DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA--------SV 517
DHVDIITFYN+IF P KPLLVE+G G +K ++ EVN+N D S
Sbjct: 846 GRTGQDHVDIITFYNEIFIPAAKPLLVEVGSAGITVKGSQVPEVNNNKDGQCPASPKVSP 905
Query: 518 FPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDI 576
FP+LPDMSPKKVSA H+VYVSPLRTS+MDALISHSSKSYYACVGESTHAY SP KDLT I
Sbjct: 906 FPSLPDMSPKKVSAAHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAI 965
Query: 577 NHRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPEQLDP 633
N+RLN NR +RG+LNFD DVDVGLVSDSMV SLYLQNGS A+++ A LK EQ DP
Sbjct: 966 NNRLNGNRNIRGSLNFD--DVDVGLVSDSMVAKSLYLQNGSCASTSGAPLKTEQPDP 1020
>gi|356556778|ref|XP_003546699.1| PREDICTED: retinoblastoma-related protein 1-like [Glycine max]
Length = 1002
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/703 (63%), Positives = 482/703 (68%), Gaps = 150/703 (21%)
Query: 16 KRKFDSLASPVKTITSPLSPHHSSTS-----------KMVVTPVSTAMTTAKWLRTIICP 64
KRKFDS+ASP KTITSPLSPH S TS KM TPVSTAMTTAKWLRT+I P
Sbjct: 363 KRKFDSMASPAKTITSPLSPHRSPTSHTNGIPGSANSKMAATPVSTAMTTAKWLRTVISP 422
Query: 65 LPSKPSADL-----------------------------------------QGANLMDNIW 83
LPSKPS +L Q ANLMDNIW
Sbjct: 423 LPSKPSPELERFLTSCDRDVTSDVVRRAQIILQAIFPSSPLGERCVTGSLQSANLMDNIW 482
Query: 84 AEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTV 138
AEQRRLEALKL Y+VLE MC AEAQV HA NLTSL FHRCMLACSAELVLATHKTV
Sbjct: 483 AEQRRLEALKLYYRVLEAMCRAEAQVFHATNLTSLLTNERFHRCMLACSAELVLATHKTV 542
Query: 139 TMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY 198
TMLF AVLER GITAF+LSKVI+SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY
Sbjct: 543 TMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY 602
Query: 199 NSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEP 257
NSL VARP+LSAEIN LG
Sbjct: 603 NSLAVARPSLSAEINRLGL----------------------------------------- 621
Query: 258 FTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGEL 317
L PMPSLD IAMHINFS GGL PV +L K E+SP + G++
Sbjct: 622 --------LAEPMPSLDEIAMHINFSCGGLPPVPTLPKLESSPTQN-----------GDI 662
Query: 318 VTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGGGGEPCAET 372
+ R+VL+ERN+FTS VKD LL N+LKSK PPPL PT+ NPGGGGE CAET
Sbjct: 663 RSPK-RNVLMERNSFTSPVKDRLLPFNSLKSKLPPPPLQSAFASPTKPNPGGGGETCAET 721
Query: 373 GINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIIL 432
GINI F KI KL AVRI+ MVERLQLSQQIRE+VYCL +R LNQ TSLFFN HIDQIIL
Sbjct: 722 GINIFFGKIIKLGAVRISGMVERLQLSQQIRENVYCLF-QRILNQWTSLFFNHHIDQIIL 780
Query: 433 CCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DHVDIITF 478
CCFYGVAKISQLNLTFKEI+YNY KQP CK QVFRSVF DHVDIITF
Sbjct: 781 CCFYGVAKISQLNLTFKEIVYNYRKQPHCKTQVFRSVFVDWSLARRNGRTGQDHVDIITF 840
Query: 479 YNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA--------SVFPALPDMSPKKVS 530
YN+IF P+VKPLLVELGP G K++R EVN+ N+A S FP LPDMSPKKVS
Sbjct: 841 YNEIFIPSVKPLLVELGPAGPTPKSDRIPEVNNKNEAQCPGSPKISPFPTLPDMSPKKVS 900
Query: 531 ATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNRRVRGA 589
ATH+VYVSPLR+S+M+ALISHSSKSYYACVGESTHAY SP KDLT IN+RLN NR+VRG
Sbjct: 901 ATHNVYVSPLRSSKMEALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVRGP 960
Query: 590 LNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPEQLD 632
LNFD DVDVGLVSDSMV NSLYLQNGS A+S+ A LK EQ D
Sbjct: 961 LNFD--DVDVGLVSDSMVANSLYLQNGSCASSSGAPLKSEQPD 1001
>gi|6984231|gb|AAF34803.1|AF230739_1 retinoblastoma-like protein [Euphorbia esula]
Length = 801
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/728 (60%), Positives = 494/728 (67%), Gaps = 156/728 (21%)
Query: 2 SGSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHSSTS-------------------- 41
SG+L GGAVN+TG KRKFD ++SP KTI+SP SP + +S
Sbjct: 132 SGNLSGGAVNVTGTKRKFDMISSPTKTISSPFSPTKTMSSPLSPFRSPASRSNGILGGLY 191
Query: 42 -KMVVTPVSTAMTTAKWLRTIICPLPSKPSADL--------------------------- 73
K+ TPV+TAMTTAKWLRT+I PLPSKPS+ L
Sbjct: 192 SKIADTPVTTAMTTAKWLRTVISPLPSKPSSQLERFLTSCDRDVTNDVTRRAQIILEAIF 251
Query: 74 --------------QGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL- 118
Q NLM+NIWAEQRRLEALKL+Y+VLE MCTAEAQVLHA NLTSL
Sbjct: 252 PSSGLGKYSITGGLQNTNLMENIWAEQRRLEALKLSYRVLEAMCTAEAQVLHANNLTSLL 311
Query: 119 ----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPREL 174
FHRCML+CSAELVLATHKTVTMLF AVLER GITAF+LSKVI+SFIRHEESLPREL
Sbjct: 312 TNERFHRCMLSCSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPREL 371
Query: 175 RRHLNSLEERLLESMVWEKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTS 233
RRHLNSLEERLLESMVWEKGSSMYNSLTVARP+LS+EIN LG
Sbjct: 372 RRHLNSLEERLLESMVWEKGSSMYNSLTVARPSLSSEINHLGL----------------- 414
Query: 234 ILTVPPTDSPTRQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSL 293
L PMPSLDAIA+ INFSSG L P+ S+
Sbjct: 415 --------------------------------LAEPMPSLDAIAVRINFSSGSLPPLPSV 442
Query: 294 HKHETSPVCSIFNFQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPP 353
K E+SP S+ C DYRSVLVERN+FTS VKD LL L+NLKSK +PP
Sbjct: 443 QKQESSPGKSVDIRSPKRPC------PDYRSVLVERNSFTSPVKDRLLALSNLKSK-IPP 495
Query: 354 PLY-----PTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQ-IRESVY 407
PL PTR NPGGGGE CAET I+I FCKINKLAAVRIN M+ERLQ S IRE+VY
Sbjct: 496 PLQSAFASPTRPNPGGGGETCAETAISIFFCKINKLAAVRINGMIERLQQSHHHIRENVY 555
Query: 408 CLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFR 467
L ++ L+ RTSLFFN HIDQIILCCFYGVAKIS++NLTF+EII NY KQPQCKPQVFR
Sbjct: 556 RLF-QQILSHRTSLFFNRHIDQIILCCFYGVAKISKVNLTFREIICNYRKQPQCKPQVFR 614
Query: 468 SVF--------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNN 513
SVF DHVDIITFYN+IF P KPLLVE+G GT K+ + EV ++
Sbjct: 615 SVFVDWSSSRQNGRTGQDHVDIITFYNEIFIPAAKPLLVEVGSSGTITKSTQVPEVINSK 674
Query: 514 DA--------SVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTH 565
D S FP+LPDMSPKKVSA+H+VYVSPLRTS+MDALISHSSKSYYACVGESTH
Sbjct: 675 DGQCPQSPKVSPFPSLPDMSPKKVSASHNVYVSPLRTSKMDALISHSSKSYYACVGESTH 734
Query: 566 AY-SPFKDLTDINHRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCA 624
AY SP KDLT IN+RLNSNR+VRG LNFD DVDVGLVSDSMV NSLYLQNGS A+S+ A
Sbjct: 735 AYQSPSKDLTAINNRLNSNRKVRGTLNFD--DVDVGLVSDSMVANSLYLQNGSCASSSGA 792
Query: 625 VLKPEQLD 632
++KPEQ D
Sbjct: 793 LIKPEQPD 800
>gi|359476005|ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-like [Vitis vinifera]
gi|254789791|sp|A7P514.1|RBR_VITVI RecName: Full=Retinoblastoma-related protein
gi|359392418|gb|AEV45768.1| RBR protein [Vitis pseudoreticulata]
Length = 1007
Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/708 (62%), Positives = 491/708 (69%), Gaps = 148/708 (20%)
Query: 9 AVNITGAKRKFDSLASPVKTITSPLSPHHS------STSKMVVTPVSTAMTTAKWLRTII 62
A++I+GAKRK DSLASP KTITSPLSP+ S + SKM TPV+TAMTTAKWLRT+I
Sbjct: 363 AMSISGAKRKIDSLASPAKTITSPLSPNRSPGILGGANSKMAPTPVTTAMTTAKWLRTVI 422
Query: 63 CPLPSKPSADLQ--------------------------------------GANLMDNIWA 84
PLPSKPSA+L+ A+LMD+IWA
Sbjct: 423 SPLPSKPSAELERFLTSCDKDVTSDVIRRANVILEAIFPSIAFGERCVTGSASLMDSIWA 482
Query: 85 EQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT 139
+QRR+EA+KL Y+VLE MCTAEAQVLHA NLTSL FHRCMLACSAELVLATHKTVT
Sbjct: 483 QQRRMEAMKLYYRVLEAMCTAEAQVLHANNLTSLLTNERFHRCMLACSAELVLATHKTVT 542
Query: 140 MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 199
MLF AVLER GITAF+LSKVI+SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN
Sbjct: 543 MLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 602
Query: 200 SLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEPF 258
SL VAR ALSAE+N LG
Sbjct: 603 SLIVARAALSAEVNRLG------------------------------------------- 619
Query: 259 TEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGEL- 317
L PMPSLDAI+MHIN S GGL PV SL K E+SP G++
Sbjct: 620 ------LLAEPMPSLDAISMHINASCGGLPPVPSLQKRESSP-----------GQNGDIR 662
Query: 318 ----VTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGGGGEP 368
V DYRSVLVERN+FTS VKD L LNNLKSK PPPL PTR NPG GE
Sbjct: 663 SPKRVCPDYRSVLVERNSFTSPVKDRFLALNNLKSKLPPPPLQSAFASPTRPNPGREGET 722
Query: 369 CAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHID 428
CAETGINI F KI KLAAVRIN MVERLQLSQQ+RE+VYCL ++ LN+RTSLFFN HID
Sbjct: 723 CAETGINIFFSKIIKLAAVRINGMVERLQLSQQMRENVYCLF-QQILNRRTSLFFNRHID 781
Query: 429 QIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DHVD 474
QIILCCFYG+AKISQ+NLTF+EII+NY KQPQCKPQ+FRSVF +HVD
Sbjct: 782 QIILCCFYGLAKISQMNLTFREIIHNYRKQPQCKPQIFRSVFVDWSSARRNGKTGKEHVD 841
Query: 475 IITFYNKIFAPTVKPLLVEL-GPVGTAMKTNRDSEVNHNNDA--------SVFPALPDMS 525
IITFYN+IF P VKPLL+E+ GT KTNR EVN+NNDA S FP+LPDMS
Sbjct: 842 IITFYNEIFIPAVKPLLMEIGPGGGTTTKTNRVPEVNNNNDAQCPESPKISPFPSLPDMS 901
Query: 526 PKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNR 584
PKKVSA H+VYVSPLR+S+MDALISHSSKSYYACVGESTHAY SP KDLT IN+RLNS R
Sbjct: 902 PKKVSAAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNSTR 961
Query: 585 RVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPEQLD 632
++RGALNFDDV+ GLVSDS+V SLYLQNGS A+S+ A LK EQ D
Sbjct: 962 KLRGALNFDDVE---GLVSDSLVAKSLYLQNGSCASSSGAPLKLEQPD 1006
>gi|296081790|emb|CBI20795.3| unnamed protein product [Vitis vinifera]
Length = 1006
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/708 (62%), Positives = 491/708 (69%), Gaps = 148/708 (20%)
Query: 9 AVNITGAKRKFDSLASPVKTITSPLSPHHS------STSKMVVTPVSTAMTTAKWLRTII 62
A++I+GAKRK DSLASP KTITSPLSP+ S + SKM TPV+TAMTTAKWLRT+I
Sbjct: 362 AMSISGAKRKIDSLASPAKTITSPLSPNRSPGILGGANSKMAPTPVTTAMTTAKWLRTVI 421
Query: 63 CPLPSKPSADLQ--------------------------------------GANLMDNIWA 84
PLPSKPSA+L+ A+LMD+IWA
Sbjct: 422 SPLPSKPSAELERFLTSCDKDVTSDVIRRANVILEAIFPSIAFGERCVTGSASLMDSIWA 481
Query: 85 EQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT 139
+QRR+EA+KL Y+VLE MCTAEAQVLHA NLTSL FHRCMLACSAELVLATHKTVT
Sbjct: 482 QQRRMEAMKLYYRVLEAMCTAEAQVLHANNLTSLLTNERFHRCMLACSAELVLATHKTVT 541
Query: 140 MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 199
MLF AVLER GITAF+LSKVI+SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN
Sbjct: 542 MLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 601
Query: 200 SLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEPF 258
SL VAR ALSAE+N LG
Sbjct: 602 SLIVARAALSAEVNRLG------------------------------------------- 618
Query: 259 TEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGEL- 317
L PMPSLDAI+MHIN S GGL PV SL K E+SP G++
Sbjct: 619 ------LLAEPMPSLDAISMHINASCGGLPPVPSLQKRESSP-----------GQNGDIR 661
Query: 318 ----VTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGGGGEP 368
V DYRSVLVERN+FTS VKD L LNNLKSK PPPL PTR NPG GE
Sbjct: 662 SPKRVCPDYRSVLVERNSFTSPVKDRFLALNNLKSKLPPPPLQSAFASPTRPNPGREGET 721
Query: 369 CAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHID 428
CAETGINI F KI KLAAVRIN MVERLQLSQQ+RE+VYCL ++ LN+RTSLFFN HID
Sbjct: 722 CAETGINIFFSKIIKLAAVRINGMVERLQLSQQMRENVYCLF-QQILNRRTSLFFNRHID 780
Query: 429 QIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DHVD 474
QIILCCFYG+AKISQ+NLTF+EII+NY KQPQCKPQ+FRSVF +HVD
Sbjct: 781 QIILCCFYGLAKISQMNLTFREIIHNYRKQPQCKPQIFRSVFVDWSSARRNGKTGKEHVD 840
Query: 475 IITFYNKIFAPTVKPLLVEL-GPVGTAMKTNRDSEVNHNNDA--------SVFPALPDMS 525
IITFYN+IF P VKPLL+E+ GT KTNR EVN+NNDA S FP+LPDMS
Sbjct: 841 IITFYNEIFIPAVKPLLMEIGPGGGTTTKTNRVPEVNNNNDAQCPESPKISPFPSLPDMS 900
Query: 526 PKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNR 584
PKKVSA H+VYVSPLR+S+MDALISHSSKSYYACVGESTHAY SP KDLT IN+RLNS R
Sbjct: 901 PKKVSAAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNSTR 960
Query: 585 RVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPEQLD 632
++RGALNFDDV+ GLVSDS+V SLYLQNGS A+S+ A LK EQ D
Sbjct: 961 KLRGALNFDDVE---GLVSDSLVAKSLYLQNGSCASSSGAPLKLEQPD 1005
>gi|224053236|ref|XP_002297730.1| hypothetical protein POPTRDRAFT_547794 [Populus trichocarpa]
gi|254789789|sp|B9GLX8.1|RBR_POPTR RecName: Full=Retinoblastoma-related protein
gi|222844988|gb|EEE82535.1| hypothetical protein POPTRDRAFT_547794 [Populus trichocarpa]
Length = 1035
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/723 (60%), Positives = 488/723 (67%), Gaps = 156/723 (21%)
Query: 2 SGSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHS-----------STSKMVVTPVST 50
SGS+ G++NITGAKRKFD ++SP KTITSPLSPH S + SKM TPVST
Sbjct: 376 SGSVSAGSLNITGAKRKFDLISSPTKTITSPLSPHRSPASHANGIPGSANSKMAATPVST 435
Query: 51 AMTTAKWLRTIICPLPSKPSADL------------------------------------- 73
AMTTAKWLRTII PLPSKPSA L
Sbjct: 436 AMTTAKWLRTIISPLPSKPSAQLERFLVSCDKDVTNDVIRRAQIILEAIFPSSSLGERCV 495
Query: 74 ----QGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
Q NLMDNIWAEQRRLEALKL Y+VLE+MCTAEAQ+LHA NLTSL FHRCML
Sbjct: 496 NGSLQSTNLMDNIWAEQRRLEALKLYYRVLESMCTAEAQILHATNLTSLLTNERFHRCML 555
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
ACSAELV+AT+KTVTMLF AVLER GITAF+LSKVI+SFIRHEESLPRELRRHLNSLEER
Sbjct: 556 ACSAELVVATYKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEER 615
Query: 185 LLESMVWEKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSP 243
LL+SMVWEKGSS+YNSLTVARPALSAEIN LG
Sbjct: 616 LLDSMVWEKGSSLYNSLTVARPALSAEINRLGL--------------------------- 648
Query: 244 TRQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCS 303
L PMPSLDAIAMHINFSSG L PV SL KHETSP
Sbjct: 649 ----------------------LAEPMPSLDAIAMHINFSSGCLPPVPSLQKHETSP--- 683
Query: 304 IFNFQFYANCYGELVT-----DDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-- 356
+ G+L + D+RSVLVERN+FTS VKD LLG NLKSK PPPL
Sbjct: 684 ------GSGQNGDLRSPKRPCTDFRSVLVERNSFTSPVKDRLLG--NLKSKLPPPPLQSA 735
Query: 357 ---PTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQ-IRESVYCLCPK 412
PTR NPGGGGE CAETGIN+ F KINKLAAVRIN M+E+LQ SQQ IRE+VY L +
Sbjct: 736 FASPTRPNPGGGGETCAETGINVFFTKINKLAAVRINGMIEKLQPSQQHIRENVYRLF-Q 794
Query: 413 RTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-- 470
L+ +TSLFFN HIDQIILCCFYGVAKIS+LNLTF+EIIYNY +QP CK VFRSVF
Sbjct: 795 LILSHQTSLFFNRHIDQIILCCFYGVAKISKLNLTFREIIYNYRRQPHCKTLVFRSVFVD 854
Query: 471 ------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA--- 515
DHVDIITFYN+IF P KPLLV++G GT +K + EV +N D
Sbjct: 855 WSSARHNGRTGQDHVDIITFYNEIFIPAAKPLLVDVGSAGTTVKASNVPEVGNNKDGQCP 914
Query: 516 -----SVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SP 569
S FP+LPDMSPKKVS+ H+VYVSPLR+S+MDALIS+SSKSYYACVGESTHAY SP
Sbjct: 915 ASPKVSPFPSLPDMSPKKVSSAHNVYVSPLRSSKMDALISNSSKSYYACVGESTHAYQSP 974
Query: 570 FKDLTDINHRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPE 629
KDL IN+RLN NR+ RG LN D+ DVGLVSDSMV NSL LQNG+ A+++ A LK E
Sbjct: 975 SKDLNAINNRLNGNRKARGTLNLDN---DVGLVSDSMVANSLGLQNGNCASTSGAALKSE 1031
Query: 630 QLD 632
Q D
Sbjct: 1032 QSD 1034
>gi|356507327|ref|XP_003522419.1| PREDICTED: retinoblastoma-related protein 1-like [Glycine max]
Length = 1014
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/707 (61%), Positives = 478/707 (67%), Gaps = 152/707 (21%)
Query: 14 GAKRKFDSLASPVKTITSPLSPHHS-----------STSKMVVTPVSTAMTTAKWLRTII 62
G KRKFDS+ASP KTITSPLSPH S + SKM TPVSTAMTTAKWLRT+I
Sbjct: 371 GVKRKFDSMASPAKTITSPLSPHRSPASHANGIPGSANSKMAATPVSTAMTTAKWLRTVI 430
Query: 63 CPLPSKPSAD-----------------------------------------LQGANLMDN 81
PLPSKPS + LQ AN++DN
Sbjct: 431 SPLPSKPSPELERFLTSCDRDATSDVVRRAQIILQAIFPSSPLGERCVTGSLQSANVVDN 490
Query: 82 IWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHK 136
IWAEQRRLEALKL Y+VLE MC AEAQVLHA NLTSL FHRCMLACSAELVLATHK
Sbjct: 491 IWAEQRRLEALKLYYRVLEAMCRAEAQVLHATNLTSLLTNERFHRCMLACSAELVLATHK 550
Query: 137 TVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSS 196
TVTMLF AVLER GITAF+LSKVI+SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSS
Sbjct: 551 TVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSS 610
Query: 197 MYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWK 255
M+NSL VARP+LSAEIN LG
Sbjct: 611 MHNSLAVARPSLSAEINSLG---------------------------------------- 630
Query: 256 EPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYG 315
L PMPSLD IAMHINFS GGL PV +L K E+ +N G
Sbjct: 631 ---------LLAEPMPSLDEIAMHINFSCGGLPPVPTLPKLESP-----------SNQNG 670
Query: 316 ELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGGGGEPCA 370
++ + R+VL+ERN+FTS VKDCLL LKSK PPPL PT+ NPGGGGE CA
Sbjct: 671 DIRSPK-RNVLMERNSFTSPVKDCLLPCIILKSKLPPPPLQSAFASPTKPNPGGGGETCA 729
Query: 371 ETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQI 430
ETGINI F KI KL AVRI+ MVERLQLSQQIRE+VY L +R LNQ TSLFFN HIDQI
Sbjct: 730 ETGINIFFGKIIKLGAVRISGMVERLQLSQQIRENVYSLF-QRILNQWTSLFFNRHIDQI 788
Query: 431 ILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DHVDII 476
ILCCFYGVAKISQLNLTFKEI+YNY KQP CKPQVFRSVF +H+DII
Sbjct: 789 ILCCFYGVAKISQLNLTFKEIVYNYRKQPHCKPQVFRSVFVDWSLARRNGRTGQEHIDII 848
Query: 477 TFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNN----------DASVFPALPDMSP 526
TFYN+IF P+VKPLLVELGP G K++R EVN N+ S FP LPDMSP
Sbjct: 849 TFYNEIFIPSVKPLLVELGPAGPTTKSDRIPEVNKNDGHLAQCPGSPKISPFPTLPDMSP 908
Query: 527 KKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNRR 585
KKVSATH+VYVSPLR+S+M+ALISHSSKSYYACVGESTHAY SP KDLT IN+RLN NR+
Sbjct: 909 KKVSATHNVYVSPLRSSKMEALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNRK 968
Query: 586 VRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPEQLD 632
VRG LNFD DVD GLVSDSMV NSLYLQNGS A+S+ A K EQ D
Sbjct: 969 VRGPLNFD--DVDFGLVSDSMVANSLYLQNGSCASSSGAPFKSEQPD 1013
>gi|7381060|gb|AAF61377.1|AF133675_1 retinoblastoma-related protein 1 [Populus tremula x Populus
tremuloides]
Length = 1035
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/723 (60%), Positives = 487/723 (67%), Gaps = 156/723 (21%)
Query: 2 SGSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHS-----------STSKMVVTPVST 50
SGS+ G++NITGAKRKFD ++SP KTITSPLSPH S + SKM TPVST
Sbjct: 376 SGSVSAGSLNITGAKRKFDLISSPTKTITSPLSPHRSPASHANGIPGSANSKMAATPVST 435
Query: 51 AMTTAKWLRTIICPLPSKPSADL------------------------------------- 73
AMTTAKWLRTII PLPSKPSA L
Sbjct: 436 AMTTAKWLRTIISPLPSKPSAQLERFLVSCDKDVTNDVIRRAQIILEAIFPSSSLGERCV 495
Query: 74 ----QGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
Q NLMDNIWAEQRRLEALKL Y+VLE+MCTAEAQ+LHA NLTSL FHRCML
Sbjct: 496 TGSLQSTNLMDNIWAEQRRLEALKLYYRVLESMCTAEAQILHATNLTSLLTNERFHRCML 555
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
ACSAELV+AT+KTVTMLF AVLER GITAF+LSKVI+SFIRHEESLPRELRRHLNSLEER
Sbjct: 556 ACSAELVVATYKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEER 615
Query: 185 LLESMVWEKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSP 243
LL+SMVWEKGSS+YNSLTVAR ALSAEIN LG
Sbjct: 616 LLDSMVWEKGSSLYNSLTVARTALSAEINRLGL--------------------------- 648
Query: 244 TRQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCS 303
L PMPSLDAIAMHINFSSG L PV SL KHETSP
Sbjct: 649 ----------------------LAEPMPSLDAIAMHINFSSGCLPPVPSLQKHETSP--- 683
Query: 304 IFNFQFYANCYGELVT-----DDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-- 356
+ G+L + D+RSVLVERN+FTS VKD LLG NLKSK PPPL
Sbjct: 684 ------GSGQNGDLRSPKRPCTDFRSVLVERNSFTSPVKDRLLG--NLKSKLPPPPLQSA 735
Query: 357 ---PTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQ-IRESVYCLCPK 412
PTR NPGGGGE CAETGIN+ F KINKLAAVRIN M+E+LQ SQQ IRE+VY L +
Sbjct: 736 FASPTRPNPGGGGETCAETGINVFFTKINKLAAVRINGMIEKLQPSQQHIRENVYRLF-Q 794
Query: 413 RTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-- 470
L+ +TSLFFN HIDQIILCCFYGVAKIS+LNLTF+EIIYNY +QP CK VFRSVF
Sbjct: 795 LILSHQTSLFFNRHIDQIILCCFYGVAKISKLNLTFREIIYNYRRQPHCKTLVFRSVFVD 854
Query: 471 ------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA--- 515
DHVDIITFYN+IF P KPLLV++G GT +K + EV +N D
Sbjct: 855 WSSARHNGRTGQDHVDIITFYNEIFIPAAKPLLVDVGSAGTTVKASNVPEVGNNKDGQCP 914
Query: 516 -----SVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SP 569
S FP+LPDMSPKKVS+ H+VYVSPLR+S+MDALIS+SSKSYYACVGESTHAY SP
Sbjct: 915 ASPKVSPFPSLPDMSPKKVSSVHNVYVSPLRSSKMDALISNSSKSYYACVGESTHAYQSP 974
Query: 570 FKDLTDINHRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPE 629
KDL IN+RLN NR+ RG LN D+ DVGLVSDSMV NSL LQNG+ A+++ A LK E
Sbjct: 975 SKDLNAINNRLNGNRKARGTLNLDN---DVGLVSDSMVANSLGLQNGNCASTSGAALKSE 1031
Query: 630 QLD 632
Q D
Sbjct: 1032 QSD 1034
>gi|449449453|ref|XP_004142479.1| PREDICTED: retinoblastoma-related protein-like [Cucumis sativus]
Length = 1024
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/721 (58%), Positives = 485/721 (67%), Gaps = 154/721 (21%)
Query: 1 SSGSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHSSTS-----------KMVVTPVS 49
SGSL GAV + G KRK DS+ SP +TITSP+SP S S K+ TPVS
Sbjct: 364 GSGSLSAGAVTMGGIKRKLDSMCSPARTITSPMSPLRSPASHANGTLNSGNTKIAATPVS 423
Query: 50 TAMTTAKWLRTIICPLPSKPSAD------------------------------------- 72
TAMTTAKWLRT+I PLP+KPS +
Sbjct: 424 TAMTTAKWLRTVISPLPAKPSVEMERFLASCDRDVTNDVVRRAHIILEAIFPNTALGERC 483
Query: 73 ----LQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCM 123
LQ A+LMDNIWAEQRRLEALKL Y+VLE MC AE+Q+LH NLTSL FHRCM
Sbjct: 484 IAGSLQSASLMDNIWAEQRRLEALKLYYRVLEAMCRAESQMLHVTNLTSLLTNERFHRCM 543
Query: 124 LACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEE 183
LACSAELVLATHKTVTMLF AVLER GITAF+LSKVI+SFIRHEESLPRELRRHLNSLEE
Sbjct: 544 LACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEE 603
Query: 184 RLLESMVWEKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDS 242
RLLESMVWEKGSS+YNSL VA+P L AEIN LG
Sbjct: 604 RLLESMVWEKGSSIYNSLIVAKPGLGAEINRLGL-------------------------- 637
Query: 243 PTRQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVC 302
L PMPSLDAIA+ INFS G+S +L +HE+ P
Sbjct: 638 -----------------------LAEPMPSLDAIAVQINFSGIGVSATPNLQRHESLP-- 672
Query: 303 SIFNFQFYANCYGEL-----VTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY- 356
G++ + D RSVLVERN+FTS VKD L+ +++KSK LPPPL
Sbjct: 673 ---------GQNGDIRSPKRLCTDLRSVLVERNSFTSPVKDRLMAFSSIKSKLLPPPLQS 723
Query: 357 ----PTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPK 412
PTR NPGGGGE CAETGINI F KI KLAAVR+N MVERLQLS QIRE+VYCL +
Sbjct: 724 AFASPTRPNPGGGGETCAETGINIFFSKITKLAAVRVNGMVERLQLSHQIRENVYCLF-Q 782
Query: 413 RTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-- 470
+ L+Q+TS+ FN HIDQIILCCFYGVAKISQL+LTF+EIIYNY KQPQCKPQVFR+VF
Sbjct: 783 QILSQKTSILFNRHIDQIILCCFYGVAKISQLSLTFREIIYNYRKQPQCKPQVFRNVFVD 842
Query: 471 ------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA--- 515
DHVDIITFYN+IF P+VKPLLVE+GP G+ MKT+R +VN+++DA
Sbjct: 843 WSSARRNGRSGQDHVDIITFYNEIFIPSVKPLLVEIGPAGSTMKTDRVPQVNNDSDAPCP 902
Query: 516 -----SVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SP 569
S FP+LPDMSPKKVS+ H+VYVSPLR+S+MDALISHSSKSYYACVGESTHA+ SP
Sbjct: 903 GSPKLSPFPSLPDMSPKKVSSAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAFQSP 962
Query: 570 FKDLTDINHRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPE 629
KDLT IN+RLN R++RG LNFD D DVGLVSDS+V NSLYLQNGS +S+ A +K E
Sbjct: 963 SKDLTAINNRLNGTRKLRGTLNFD--DADVGLVSDSLVANSLYLQNGSCGSSSGAPIKSE 1020
Query: 630 Q 630
Q
Sbjct: 1021 Q 1021
>gi|449487265|ref|XP_004157544.1| PREDICTED: retinoblastoma-related protein-like [Cucumis sativus]
Length = 1125
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/721 (58%), Positives = 485/721 (67%), Gaps = 154/721 (21%)
Query: 1 SSGSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHSSTS-----------KMVVTPVS 49
SGSL GAV + G KRK DS+ SP +TITSP+SP S S K+ TPVS
Sbjct: 465 GSGSLSAGAVTMGGIKRKLDSMCSPARTITSPMSPLRSPASHANGTLNSGNTKIAATPVS 524
Query: 50 TAMTTAKWLRTIICPLPSKPS--------------------------------------- 70
TAMTTAKWLRT+I PLP+KPS
Sbjct: 525 TAMTTAKWLRTVISPLPAKPSVEMERFLASCDRDVTNDVVRRAHIILEAIFPNTALGERC 584
Query: 71 --ADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCM 123
+LQ A+LMDNIWAEQRRLEALKL Y+VLE MC AE+Q+LH NLTSL FHRCM
Sbjct: 585 IAGNLQSASLMDNIWAEQRRLEALKLYYRVLEAMCRAESQMLHVTNLTSLLTNERFHRCM 644
Query: 124 LACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEE 183
LACSAELVLATHKTVTMLF AVLER GITAF+LSKVI+SFIRHEESLPRELRRHLNSLEE
Sbjct: 645 LACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEE 704
Query: 184 RLLESMVWEKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDS 242
RLLESMVWEKGSS+YNSL VA+P L AEIN LG
Sbjct: 705 RLLESMVWEKGSSIYNSLIVAKPGLGAEINRLGL-------------------------- 738
Query: 243 PTRQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVC 302
L PMPSLDAIA+ INFS G+S +L KHE+ P
Sbjct: 739 -----------------------LAEPMPSLDAIAVQINFSGIGVSATPNLQKHESLP-- 773
Query: 303 SIFNFQFYANCYGEL-----VTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY- 356
G++ + D RSVLVERN+FTS VKD L+ +++KSK LPPPL
Sbjct: 774 ---------GQNGDIRSPKRLCTDLRSVLVERNSFTSPVKDRLMAFSSIKSKLLPPPLQS 824
Query: 357 ----PTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPK 412
PTR NPGGGGE CAETGINI F KI KLAAVR+N MVERLQLS QIRE+VYCL +
Sbjct: 825 AFASPTRPNPGGGGETCAETGINIFFSKITKLAAVRVNGMVERLQLSHQIRENVYCLF-Q 883
Query: 413 RTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-- 470
+ L+Q+TS+ FN HIDQIILCCFYGVAKISQL+LTF+EIIYNY KQPQCKPQVFR+VF
Sbjct: 884 QILSQKTSILFNRHIDQIILCCFYGVAKISQLSLTFREIIYNYRKQPQCKPQVFRNVFVD 943
Query: 471 ------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA--- 515
DHVDIITFYN+IF P+VKPLLVE+GP G+ MKT+R +VN+++DA
Sbjct: 944 WSSARRNGRSGQDHVDIITFYNEIFIPSVKPLLVEIGPAGSTMKTDRVPQVNNDSDAPCP 1003
Query: 516 -----SVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SP 569
S FP+LPDMSPKKVS+ H+VYVSPLR+S+MDALISHSSKSYYACVGESTHA+ SP
Sbjct: 1004 GSPKLSPFPSLPDMSPKKVSSAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAFQSP 1063
Query: 570 FKDLTDINHRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPE 629
KDLT IN+RLN R++RG LNFD D DVGLVSDS+V NSLYLQNGS +S+ A +K E
Sbjct: 1064 SKDLTAINNRLNGTRKLRGTLNFD--DADVGLVSDSLVANSLYLQNGSCGSSSGAPIKSE 1121
Query: 630 Q 630
Q
Sbjct: 1122 Q 1122
>gi|122233627|sp|Q4JF75.1|RBR_SCUBA RecName: Full=Retinoblastoma-related protein
gi|70568829|dbj|BAE06273.1| retinoblastoma [Scutellaria baicalensis]
Length = 1006
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/697 (60%), Positives = 477/697 (68%), Gaps = 137/697 (19%)
Query: 14 GAKRKFDSLASPVKTITSPLSPHHS-----------STSKMVVTPVSTAMTTAKWLRTII 62
G KRK D+++SP KTITSPLSPH S SKM TPV+TAMTTAKWLRT+I
Sbjct: 368 GTKRKLDAMSSPAKTITSPLSPHRSPICHSNGFIVGGISKMASTPVTTAMTTAKWLRTVI 427
Query: 63 CPLPSKPSADL---------------------------------QGANLMDNIWAEQRRL 89
PLPSKPSA+L Q A+LMDNIWAEQRR+
Sbjct: 428 APLPSKPSAELEKFLTSCDRDVTPDVTRRAQIILEAIFPSSGLGQNASLMDNIWAEQRRM 487
Query: 90 EALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLA 144
EA+KL ++VL+ +CTAE+Q+LHA NLTSL FHRCMLACSAELVLATHKTVTMLF
Sbjct: 488 EAMKLYFRVLQALCTAESQILHANNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPT 547
Query: 145 VLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
VLER GITAF+LSKVI+SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL VA
Sbjct: 548 VLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLIVA 607
Query: 205 RPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEPFTEVDS 263
RPALSAEI+ LG
Sbjct: 608 RPALSAEISRLGL----------------------------------------------- 620
Query: 264 IFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELVTDDYR 323
L PMPSLDAIAMH N S G L P+ +L KHE + Q + V +YR
Sbjct: 621 --LAEPMPSLDAIAMHNNMSCGVLPPMQALLKHEK-------HGQNGDIRSPKRVCTEYR 671
Query: 324 SVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGGGGEPCAETGINICF 378
SVLVERN+FTS VKD LL LNNLKSK PP L+ PTR +PGGGGE CAET +N+ F
Sbjct: 672 SVLVERNSFTSPVKDRLLALNNLKSKFPPPILHSAFASPTRPSPGGGGETCAETAVNVFF 731
Query: 379 CKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGV 438
KI KLAAVRIN MVERLQLSQQIRESVYCL K L+QRT+LFFN HIDQI+LCCFYGV
Sbjct: 732 SKIVKLAAVRINGMVERLQLSQQIRESVYCLFQK-ILSQRTTLFFNRHIDQILLCCFYGV 790
Query: 439 AKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DHVDIITFYNKIFA 484
+KISQL LTFKEII+NY KQPQCKPQVFR+V+ DHVDIITFYN+IF
Sbjct: 791 SKISQLTLTFKEIIFNYRKQPQCKPQVFRNVYVDWKALRRTGKSGPDHVDIITFYNEIFV 850
Query: 485 PTVKPLLVELGPVGTAMKTNRDSEVNHNNDA--------SVFPALPDMSPKKVSATHSVY 536
P VKPLLVE+ P G+A ++ E +N + S FP+LPDMSPKKVSA H+VY
Sbjct: 851 PAVKPLLVEIAPGGSAQSGSQVPEAKNNTNGVNPSSPRTSSFPSLPDMSPKKVSAAHNVY 910
Query: 537 VSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNRRVRGALNFDDV 595
VSPLR+S+MDALISHSS+SYYACVGESTHAY SP KDLT IN+RLN NR+VRG LNFD
Sbjct: 911 VSPLRSSKMDALISHSSRSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVRGTLNFD-- 968
Query: 596 DVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPEQLD 632
DVDVGLV+DS+V NSLY+QNGS A+S+ V+K EQ D
Sbjct: 969 DVDVGLVTDSVVANSLYVQNGSCASSSHMVVKSEQQD 1005
>gi|380710179|gb|AFD98848.1| retinoblastoma-related protein 1 [Solanum lycopersicum]
Length = 1018
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/713 (59%), Positives = 481/713 (67%), Gaps = 148/713 (20%)
Query: 9 AVNITGAKRKFDSLASPVKTITSPLSPHHS------------STSKMVVTPVSTAMTTAK 56
AVN+ G K+KFD++ASP KTITSPLSP+ S SKM TPV+TAMTTA+
Sbjct: 366 AVNMNGIKKKFDAMASPTKTITSPLSPYRSPGASNVNSNLNCGNSKMAATPVTTAMTTAR 425
Query: 57 WLRTIICPLPSKPSADL-----------------------------------------QG 75
WLRT+I PL +KPS +L Q
Sbjct: 426 WLRTVIAPLQAKPSPELERFLSACDRNVSADVIRRAHIILEAIFPSSGPGEHCAAGSLQS 485
Query: 76 ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAEL 130
+LMDNIWAEQRR E+LKL Y+VL+TMC AE+Q+LH NLTSL FHRCMLACSAEL
Sbjct: 486 TSLMDNIWAEQRRSESLKLYYRVLQTMCVAESQILHVTNLTSLLTNERFHRCMLACSAEL 545
Query: 131 VLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMV 190
VLATHKTVTMLF AVLER GIT+F+LSKVI+SFIRHEESLPRELRRHLNSLEERLLESMV
Sbjct: 546 VLATHKTVTMLFPAVLERTGITSFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMV 605
Query: 191 WEKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYE 249
WEKGSSMYNSLTVA+P+LSAEIN LG
Sbjct: 606 WEKGSSMYNSLTVAKPSLSAEINRLGL--------------------------------- 632
Query: 250 NLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSP---VCSIFN 306
L PMPSLDAIAMHIN S G L PV L K + +P +C I +
Sbjct: 633 ----------------LAEPMPSLDAIAMHINPSLGNLPPVPPLQKSDLAPNGHICDIRS 676
Query: 307 FQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSN 361
+ + +YRSVLVERN+FTS VKD L L N+KSK PPPL PTR N
Sbjct: 677 --------PKRLCTEYRSVLVERNSFTSPVKDRFLALTNIKSK-FPPPLQSAFASPTRPN 727
Query: 362 PGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSL 421
PGGGGE CAET IN+ F KI KLAAVRIN M+ERLQLSQQIRE+VYCL ++ L+QRTSL
Sbjct: 728 PGGGGETCAETSINVFFGKIVKLAAVRINGMIERLQLSQQIRETVYCLF-QKILSQRTSL 786
Query: 422 FFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----------- 470
FF+ HIDQIILC FYGVAKISQLNLTFKEIIYNY KQPQCKPQVFRSVF
Sbjct: 787 FFSRHIDQIILCSFYGVAKISQLNLTFKEIIYNYRKQPQCKPQVFRSVFVDWTSARHNGK 846
Query: 471 ---DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTN------RDSEVNHNNDASVFPAL 521
+HVDIITFYN++F P+VKPLLVEL P G K N +D + + +S FP+L
Sbjct: 847 TGSEHVDIITFYNEMFIPSVKPLLVELAPAGNEQKNNHVEKTKKDGQGPASPRSSSFPSL 906
Query: 522 PDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRL 580
PDMSPKKVSA H+VYVSPLR+S+MDALISHSSKSYYACVGESTHAY SP KDLT IN+RL
Sbjct: 907 PDMSPKKVSAVHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTVINNRL 966
Query: 581 NSNRRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPEQLDP 633
N NR++RGALNFDDVD VGLVSDS+V N+LYLQNG+ +S A +K EQ +P
Sbjct: 967 NGNRKLRGALNFDDVDA-VGLVSDSIVANTLYLQNGNCISSPRAAVKTEQPEP 1018
>gi|75253426|sp|Q66WV0.1|RBR1_NICBE RecName: Full=Retinoblastoma-related protein 1; Short=NbRBR1
gi|51538007|gb|AAU05979.1| retinoblastoma protein [Nicotiana benthamiana]
Length = 1003
Score = 747 bits (1928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/702 (60%), Positives = 475/702 (67%), Gaps = 145/702 (20%)
Query: 9 AVNITGAKRKFDSLASPVKTITSPLSPHHS---STSKM-VVTPVSTAMTTAKWLRTIICP 64
AVN+ G KRKFD++ASP KT+TS LSP+ S + SKM TPVSTAMTTA+WLRT+I P
Sbjct: 364 AVNMNGTKRKFDAMASPAKTVTSTLSPYRSPNCANSKMTAATPVSTAMTTARWLRTVIAP 423
Query: 65 LPSKPSAD------------------------------------------LQGANLMDNI 82
L KPSA+ LQ +LMDNI
Sbjct: 424 LQPKPSAELERFLSSCDRDVTADVIRRAQIILEAIFPSSGPAEHCAAGGSLQSTSLMDNI 483
Query: 83 WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKT 137
WAEQRR EALKL Y+VL+TMCTAE+Q+L+ NLTSL FHRCMLACSAELVLATHKT
Sbjct: 484 WAEQRRSEALKLYYRVLQTMCTAESQILNGNNLTSLLTNERFHRCMLACSAELVLATHKT 543
Query: 138 VTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSM 197
VTMLF AVLER GITAF+LSKVI+SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSM
Sbjct: 544 VTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSM 603
Query: 198 YNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKE 256
YNSL VA+P+L+AEIN +G
Sbjct: 604 YNSLAVAKPSLAAEINRMG----------------------------------------- 622
Query: 257 PFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGE 316
L PMPSLDAIAMHIN SSG L P+ SLHK+ +P I + + +
Sbjct: 623 --------LLAEPMPSLDAIAMHINLSSGSLPPLPSLHKNNLAPNGQIGDIR-----SPK 669
Query: 317 LVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGGGGEPCAE 371
V +YRSVLVERN+FTS VKD L LNN+KSK PP L+ PTR NPGGGGE CAE
Sbjct: 670 KVCSEYRSVLVERNSFTSPVKDRFLALNNIKSKFPPPALHSAFASPTRPNPGGGGETCAE 729
Query: 372 TGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQII 431
T IN+ F KI KLAAVRIN M+ERLQLSQQIRE+VYCL ++ L+QRTSLFFN HIDQII
Sbjct: 730 TAINVFFGKIVKLAAVRINGMIERLQLSQQIRETVYCLF-QKILSQRTSLFFNRHIDQII 788
Query: 432 LCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DHVDIIT 477
LC FYGVAKISQLNLTFKEII NY KQPQCKPQVFRSVF DHVDIIT
Sbjct: 789 LCSFYGVAKISQLNLTFKEIICNYRKQPQCKPQVFRSVFVDWTLARHNVRTGADHVDIIT 848
Query: 478 FYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA--------SVFPALPDMSPKKV 529
FYN++F P+VKPLLVEL P G +SE N +ND S FP LPDMSPKKV
Sbjct: 849 FYNEMFIPSVKPLLVELAPAGN------NSEKNDHNDGQGPASPKPSPFPKLPDMSPKKV 902
Query: 530 SATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNRRVRG 588
SA H+VYVSPLR S+MDALISHSSKSYYACVGESTHAY SP KDL IN+RLN NR++RG
Sbjct: 903 SAVHNVYVSPLRASKMDALISHSSKSYYACVGESTHAYQSPSKDLDVINNRLNGNRKLRG 962
Query: 589 ALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPEQ 630
ALNF DVD GLVSDS+V NSLYLQNG+ S A +K EQ
Sbjct: 963 ALNF---DVDAGLVSDSIVANSLYLQNGN-CRSPVAHVKTEQ 1000
>gi|75266074|sp|Q9SLZ4.1|RBR1_PEA RecName: Full=Retinoblastoma-related protein 1; Short=PsRB1
gi|6681366|dbj|BAA88690.1| retinoblastoma-related protein [Pisum sativum]
Length = 1026
Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/725 (60%), Positives = 484/725 (66%), Gaps = 152/725 (20%)
Query: 1 SSGSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHS-----------STSKMVVTPVS 49
+SGSL G+V+ G KRK D + SP K ITSPLSPH S +T + TPVS
Sbjct: 360 ASGSLSRGSVSAGGVKRKIDLMTSPTKMITSPLSPHRSPASHANGIPSSATPMIAATPVS 419
Query: 50 TAMTTAKWLRTIICPLPSKPSADL------------------------------------ 73
TAMTTAKWLRT+I PLPSKPS +L
Sbjct: 420 TAMTTAKWLRTVISPLPSKPSQELERFLTSCDKDITSDVIRRAQIILQAIFPSSPLGDRC 479
Query: 74 -----QGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCM 123
Q ANLMDNIWAEQRRLEALKL Y+VL TMC AEAQ+L NLTSL FHRCM
Sbjct: 480 VTGSLQSANLMDNIWAEQRRLEALKLYYRVLATMCRAEAQIL-GNNLTSLLTNERFHRCM 538
Query: 124 LACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEE 183
LACSAELVLATHKTVTMLF AVLER GITAF+LSKVI+SFIR+EESLPRELRRHLNSLEE
Sbjct: 539 LACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRYEESLPRELRRHLNSLEE 598
Query: 184 RLLESMVWEKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDS 242
RLLES+VWEKGSSMYNSL VARPALS EIN LG
Sbjct: 599 RLLESLVWEKGSSMYNSLAVARPALSVEINRLGL-------------------------- 632
Query: 243 PTRQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVC 302
L PM SLD IAM INFS GGL PV SL K E P+
Sbjct: 633 -----------------------LAEPMRSLDEIAMDINFSCGGLPPVPSLPKPE--PMS 667
Query: 303 SIFNFQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----P 357
+ Q + ++R+VL ERN+FTS VKD LL L+NLKSK LPPPL P
Sbjct: 668 A----QNGDPRSPKRPCTEHRNVLAERNSFTSPVKDRLLHLSNLKSKLLPPPLQSAFASP 723
Query: 358 TRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQ 417
T+ NPGGGGE CAETGI++ F KI KL AVRI+ MVERLQLSQQIRE+VYCL +R LNQ
Sbjct: 724 TKPNPGGGGETCAETGISVFFSKIVKLGAVRISGMVERLQLSQQIRENVYCLF-QRILNQ 782
Query: 418 RTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------- 470
TSLFFN HIDQIILCCFYGVAKISQLNLTF+EIIYNY KQPQCKP+VFRSVF
Sbjct: 783 WTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPEVFRSVFVDWSSAR 842
Query: 471 -----------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA---- 515
+H+DII+FYN++F P+VKPLLVE+GP G + +R E N+ ND
Sbjct: 843 RNGSCKQRTGQEHIDIISFYNEVFIPSVKPLLVEIGPGGATTRNDRIPEANNKNDGHLAQ 902
Query: 516 -------SVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY- 567
S FP+LPDMSPKKVSATH+VYVSPLR+S+MDALISHSSKSYYACVGESTHAY
Sbjct: 903 CPGSPRISPFPSLPDMSPKKVSATHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQ 962
Query: 568 SPFKDLTDINHRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLK 627
SP KDLT IN+RLN NR+VRG LNFD DVDVGLVSDSMV NSLYLQNGS+A+S+ A LK
Sbjct: 963 SPSKDLTAINNRLNGNRKVRGPLNFD--DVDVGLVSDSMVANSLYLQNGSSASSSGAPLK 1020
Query: 628 PEQLD 632
EQ D
Sbjct: 1021 SEQPD 1025
>gi|357515345|ref|XP_003627961.1| Retinoblastoma-related protein [Medicago truncatula]
gi|355521983|gb|AET02437.1| Retinoblastoma-related protein [Medicago truncatula]
Length = 1052
Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/715 (60%), Positives = 480/715 (67%), Gaps = 162/715 (22%)
Query: 16 KRKFDSLASPVKTITSPLSPHHS-----------STSKMVVTPVSTAMTTAKWLRTIICP 64
KRK+D + SP KTITSPLSP S + SK+ TPVSTAMTTAKWLRT+I P
Sbjct: 401 KRKYDLMMSPAKTITSPLSPQRSPASHANGIPGSANSKIAATPVSTAMTTAKWLRTVISP 460
Query: 65 LPSKPSADL-----------------------------------------QGANLMDNIW 83
LPSKPS +L Q ANLMDNIW
Sbjct: 461 LPSKPSQELERFLTSCDRDITSEVVRRAQIILQAIFPSSPLGDRCVTGSLQSANLMDNIW 520
Query: 84 AEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTV 138
AEQRRLEA+KL Y++L TMC AEAQ+L NLTSL FHRCMLACSAELVLATHKTV
Sbjct: 521 AEQRRLEAMKLYYRLLATMCRAEAQIL-GNNLTSLLTNERFHRCMLACSAELVLATHKTV 579
Query: 139 TMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY 198
TMLF AVLER GITAF+LSKVI+SFIR+EESLPRELRRHLNSLEERLLES+VWEKGSSMY
Sbjct: 580 TMLFPAVLERTGITAFDLSKVIESFIRYEESLPRELRRHLNSLEERLLESLVWEKGSSMY 639
Query: 199 NSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEP 257
NSL VARPALSAEIN LG
Sbjct: 640 NSLAVARPALSAEINRLGM----------------------------------------- 658
Query: 258 FTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGEL 317
L PMPSLD IAM INFS GGL PV SL K ET P + G++
Sbjct: 659 --------LAEPMPSLDEIAMQINFSCGGLPPVPSLPKPETLPAQN-----------GDM 699
Query: 318 -----VTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGGGGE 367
+ + R+VLVERN+FTS VKD LL L+NLKSK LPPPL PT+ NPGGGGE
Sbjct: 700 RSPKRLCTENRNVLVERNSFTSPVKDRLLHLSNLKSKLLPPPLQSAFASPTKPNPGGGGE 759
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
CAETGI++ F KI KL AVRI+ MVERLQLSQQIRE+VY L +R LNQ TSLFFN HI
Sbjct: 760 TCAETGISVFFSKIVKLGAVRISGMVERLQLSQQIRENVYSLF-QRILNQWTSLFFNRHI 818
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----------------- 470
DQIILCCFYGVAKISQLNLTF+EIIYNY KQPQCKPQVFRSVF
Sbjct: 819 DQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWSSARRNGGSRHRTG 878
Query: 471 -DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA-----------SVF 518
+H+DII+FYN++F P+VKPLLVELGP G +++++ E N+ ND S F
Sbjct: 879 QEHIDIISFYNEVFIPSVKPLLVELGPGGATVRSDQVPEANNKNDGHLVQNPGSPRISPF 938
Query: 519 PALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDIN 577
P+LPDMSPKKVSA H+VYVSPLR+S+MDALISHSSKSYYACVGESTHAY SP KDLT IN
Sbjct: 939 PSLPDMSPKKVSAAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAIN 998
Query: 578 HRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPEQLD 632
+RLNSNR+VRG L FD DVDVGLVSDSMV NSLYLQNGS+A+S+ A LK EQ D
Sbjct: 999 NRLNSNRKVRGPLKFD--DVDVGLVSDSMVANSLYLQNGSSASSSGAPLKSEQPD 1051
>gi|254789787|sp|A9UL14.1|RBR_MEDSA RecName: Full=Retinoblastoma-related protein; Short=MsRBR
gi|62956049|gb|AAY23367.1| retinoblastoma-related protein [Medicago sativa]
Length = 1025
Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/709 (60%), Positives = 474/709 (66%), Gaps = 150/709 (21%)
Query: 16 KRKFDSLASPVKTITSPLSPHHS-----------STSKMVVTPVSTAMTTAKWLRTIICP 64
KRK+D + SP KTI SPLSP S + SK+ TPVSTAMTTAKWLRT+I P
Sbjct: 374 KRKYDLMMSPSKTIISPLSPQRSPASHANGIPGSTNSKIAATPVSTAMTTAKWLRTVISP 433
Query: 65 LPSKPSAD-----------------------------------------LQGANLMDNIW 83
LPSKPS + LQ ANLMDNIW
Sbjct: 434 LPSKPSQELERFLTSCDRDITSEVVRRAQIILQAIFPSSPLGDRCVTGSLQSANLMDNIW 493
Query: 84 AEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTV 138
AEQRRLEA+KL Y++L TMC AEAQ+L NLTSL FHRCMLACSAELVLATHKTV
Sbjct: 494 AEQRRLEAMKLYYRLLATMCRAEAQIL-GNNLTSLLTNERFHRCMLACSAELVLATHKTV 552
Query: 139 TMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY 198
TMLF AVLER GITAF+LSKVI+SFIR+EESLPRELRRHLNSLEERLLES+VWEKGSSMY
Sbjct: 553 TMLFPAVLERTGITAFDLSKVIESFIRYEESLPRELRRHLNSLEERLLESLVWEKGSSMY 612
Query: 199 NSLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEPF 258
NSL VARPALSAEIN L EP
Sbjct: 613 NSLAVARPALSAEIN------------------------------------RLSMLAEP- 635
Query: 259 TEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELV 318
MPSLD IAMHINFS GGL PV SL K ET P Q + +
Sbjct: 636 -----------MPSLDEIAMHINFSCGGLPPVPSLPKPETLPA------QNGDMRSPKRL 678
Query: 319 TDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGGGGEPCAETG 373
+ R+VL ERN+FTS VKD LL L+NLKSK LPPPL PT+ NPGGGGE CAETG
Sbjct: 679 CTENRNVLAERNSFTSPVKDRLLHLSNLKSKLLPPPLQSAFASPTKPNPGGGGETCAETG 738
Query: 374 INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILC 433
I++ F KI KL AVRI+ MVERLQLSQQ RE+VY L +R LNQRTSLFFN HIDQIILC
Sbjct: 739 ISVFFSKIVKLGAVRISGMVERLQLSQQTRENVYSLF-QRILNQRTSLFFNRHIDQIILC 797
Query: 434 CFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------------DHVDI 475
CFYGVAKISQLNLTF+EIIYNY KQPQCKPQVFRSVF +H+DI
Sbjct: 798 CFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWSPARRNGGARHRTGQEHIDI 857
Query: 476 ITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA-----------SVFPALPDM 524
I+FYN++F P+VKPLLVELGP G +++++ E N D S FP+LPDM
Sbjct: 858 ISFYNEVFIPSVKPLLVELGPGGATVRSDQVPEANSKTDGHLVQNPGSPRISPFPSLPDM 917
Query: 525 SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSN 583
SPKKVSA H+VYVSPLR+S+MDALISHSSKSYYACVGESTHAY SP KDLT IN+RLNSN
Sbjct: 918 SPKKVSAAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNSN 977
Query: 584 RRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPEQLD 632
R+VRG L FD DVDVGLVSDSMV NSLYLQNGS+A+S+ A LK EQ D
Sbjct: 978 RKVRGPLKFD--DVDVGLVSDSMVANSLYLQNGSSASSSGAPLKSEQPD 1024
>gi|254789785|sp|B1ABR6.1|RBR_HIEPI RecName: Full=Retinoblastoma-related protein
gi|167593883|gb|ABZ85628.1| retinoblastoma-related protein [Hieracium piloselloides]
Length = 1005
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/700 (59%), Positives = 461/700 (65%), Gaps = 152/700 (21%)
Query: 9 AVNITGAKRKFDSLASPVKTITSPLSPHHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSK 68
A+N+TG KRK DS+ SP KTITSPLSP+ S SKM+ TPVSTAMTTAKWLRT++ PL S
Sbjct: 368 AINMTGTKRKIDSMTSPTKTITSPLSPYKSP-SKMISTPVSTAMTTAKWLRTVVSPLSSF 426
Query: 69 PSADL-----------------------------------------QGANLMDNIWAEQR 87
PS DL Q NLMDNIWAEQR
Sbjct: 427 PSVDLTRFLQSCDKDVTSDVIKRARIILEAIFPSSGIPDRTVLSNTQTTNLMDNIWAEQR 486
Query: 88 RLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLF 142
RLEALKL Y+VL MC AE+Q+LH NLTSL FHRCMLACSAELVLATHKTVTMLF
Sbjct: 487 RLEALKLYYRVLHAMCKAESQILHGNNLTSLLTNERFHRCMLACSAELVLATHKTVTMLF 546
Query: 143 LAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLT 202
AVLER GITAF+LSKVI+SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLT
Sbjct: 547 PAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLT 606
Query: 203 VARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEPFTEV 261
+ARP LS EIN LG
Sbjct: 607 IARPNLSNEINRLGL--------------------------------------------- 621
Query: 262 DSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGEL---- 317
L PMPSLDAIA+ N S GGL PV K +TSP S GE+
Sbjct: 622 ----LAGPMPSLDAIALQCNMSCGGLPPVP---KRDTSPGKS-----------GEIRSPK 663
Query: 318 -VTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGGGGEPCAE 371
V ++YRSVLVERN+FTS VKD LLG+ NLKSK L P L PTR +P G E CAE
Sbjct: 664 RVCNEYRSVLVERNSFTSPVKDRLLGIGNLKSKILSPALQSAFASPTRPHPTRG-ETCAE 722
Query: 372 TGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQII 431
T +N+ F KI KLAAVRIN MVER+QL+QQIRE VYCL ++ L QRTSLFFN HIDQII
Sbjct: 723 TAVNLFFSKIVKLAAVRINGMVERMQLTQQIRERVYCLF-QQILGQRTSLFFNRHIDQII 781
Query: 432 LCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DHVDIIT 477
LCCFYGVAKI+QL+LTFKEII+NY KQP CKPQVFR+VF DHVDII
Sbjct: 782 LCCFYGVAKITQLSLTFKEIIFNYRKQPHCKPQVFRAVFVDDRSSSRRGKTGQDHVDIIM 841
Query: 478 FYNKIFAPTVKPLLVELGPVGTAMK-TNRDSEVNHNNDA-----------SVFPALPDMS 525
FYN+IF P+VKPLLVEL P N+ SE N +++ S FP+LPDMS
Sbjct: 842 FYNEIFIPSVKPLLVELAPSNVPKNPNNQVSETNKKDESGPCPCPGSPKVSSFPSLPDMS 901
Query: 526 PKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNR 584
PKKVSA H+VYVSPLR+++MDALISH SKSYYACVGESTHAY SP KDLT IN+RLN R
Sbjct: 902 PKKVSAVHNVYVSPLRSTKMDALISHGSKSYYACVGESTHAYQSPSKDLTAINNRLNGTR 961
Query: 585 RVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCA 624
+VRG+LNFD +VDVGLVSDS+V SLYLQNG AS+
Sbjct: 962 KVRGSLNFD--EVDVGLVSDSLVSQSLYLQNGKGPASSSG 999
>gi|254789786|sp|B1ABS0.1|RBR_HIEPL RecName: Full=Retinoblastoma-related protein
gi|167593891|gb|ABZ85632.1| retinoblastoma-related protein [Hieracium pilosella]
Length = 1008
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/692 (59%), Positives = 457/692 (66%), Gaps = 152/692 (21%)
Query: 9 AVNITGAKRKFDSLASPVKTITSPLSPHHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSK 68
A+N+TG KRK DS+ SP KTITSPLSP+ S SKM+ TPVSTAMTTAKWLRT++ PL S
Sbjct: 368 AINMTGTKRKVDSMTSPTKTITSPLSPYKSP-SKMISTPVSTAMTTAKWLRTVVSPLSSF 426
Query: 69 PSADL-----------------------------------------QGANLMDNIWAEQR 87
PS DL Q NLMDNIWAEQR
Sbjct: 427 PSVDLTRFLQSCDKDVTSDVIKRARIILEAIFPSSGIPDRTIISNTQTTNLMDNIWAEQR 486
Query: 88 RLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLF 142
RLEALKL Y+VL MC AE+Q+LH NLTSL FHRCMLACSAELVLATHKTVTMLF
Sbjct: 487 RLEALKLYYRVLHAMCKAESQILHGNNLTSLLTNERFHRCMLACSAELVLATHKTVTMLF 546
Query: 143 LAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLT 202
AVLER GITAF+LSKVI+SFIRHEE LPRELRRHLNSLEERLLESMVWEKGSSMYNSLT
Sbjct: 547 PAVLERTGITAFDLSKVIESFIRHEEPLPRELRRHLNSLEERLLESMVWEKGSSMYNSLT 606
Query: 203 VARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEPFTEV 261
+ARP LS EIN LG
Sbjct: 607 IARPNLSNEINRLGL--------------------------------------------- 621
Query: 262 DSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGEL---- 317
L PMPSLDAIA+ N S GGL PV K +TSP S GE+
Sbjct: 622 ----LADPMPSLDAIALQCNMSCGGLPPVP---KRDTSPGKS-----------GEIRSPK 663
Query: 318 -VTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGGGGEPCAE 371
V ++YRSVLVERN+FTS VKD LLG+NNLKSK L P L PTR +P G E C E
Sbjct: 664 RVCNEYRSVLVERNSFTSPVKDRLLGINNLKSKILSPALQSAFASPTRPHPTRG-ETCGE 722
Query: 372 TGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQII 431
T +N+ F KI KLAAVRIN MVER+QL+QQIRE VYCL ++ L QRTSLFFN HIDQII
Sbjct: 723 TAVNLFFSKIVKLAAVRINGMVERMQLTQQIRERVYCLF-QQILGQRTSLFFNRHIDQII 781
Query: 432 LCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DHVDIIT 477
LCCFYGVAKISQL+LTFKEII+NY KQP CKPQVFR+VF DHVDII
Sbjct: 782 LCCFYGVAKISQLSLTFKEIIFNYRKQPHCKPQVFRAVFVDDRSSSRRSKTGQDHVDIIM 841
Query: 478 FYNKIFAPTVKPLLVELGPVGTAMK-TNRDSEVNHNNDA-----------SVFPALPDMS 525
FYN++F P+VKPLLVEL P N+ S+ N +++ S FP+LPDMS
Sbjct: 842 FYNEVFIPSVKPLLVELAPSNVPKNPNNQVSDSNKKDESGPCPCPGSPKVSSFPSLPDMS 901
Query: 526 PKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNR 584
PKKVSA H+VYVSPLR+++MDALISH SKSYYACVGESTHAY SP KDLT IN+RLN R
Sbjct: 902 PKKVSAVHNVYVSPLRSTKMDALISHGSKSYYACVGESTHAYQSPSKDLTAINNRLNGTR 961
Query: 585 RVRGALNFDDVDVDVGLVSDSMVVNSLYLQNG 616
+VRG+LNFD +VDVGLVSDS+V SLYLQNG
Sbjct: 962 KVRGSLNFD--EVDVGLVSDSLVTQSLYLQNG 991
>gi|122232354|sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related protein
gi|89111303|dbj|BAE80326.1| retinoblastoma related protein [Camellia sinensis]
Length = 1025
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/717 (58%), Positives = 471/717 (65%), Gaps = 146/717 (20%)
Query: 3 GSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHS------------STSKMVVTPVST 50
GSL GGA+NI+GAKRK DS+ASP +TITSPL+P+ S S SKM TPV+T
Sbjct: 367 GSLSGGAMNISGAKRKIDSIASPARTITSPLAPYCSPSASHAKAIPCGSNSKMAATPVTT 426
Query: 51 AMTTAKWLRTIICPLPSKPSADL------------------------------------- 73
AMTTAKWLRTII PLP KPS +L
Sbjct: 427 AMTTAKWLRTIISPLPPKPSPELERFLSSCDSDVTTDVIRRANIILEAIFPSSGLGEECI 486
Query: 74 ----QGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
Q +LMD+IWAEQRRLEALKL Y+VL+ MCTAEAQ+LHA NLTSL FHRCML
Sbjct: 487 TGGLQCTSLMDSIWAEQRRLEALKLYYRVLQAMCTAEAQILHANNLTSLLTNERFHRCML 546
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
ACSAELVLATHKT TMLF AVLER GITAF+LSK+I R +ESLPREL+RHLNSLEER
Sbjct: 547 ACSAELVLATHKTATMLFPAVLERTGITAFDLSKMIGVSFRLKESLPRELKRHLNSLEER 606
Query: 185 LLESMVWEKGSSMYNSLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPT 244
LLESMVWEKGSSMYNSLTVARPALSAE T+ L
Sbjct: 607 LLESMVWEKGSSMYNSLTVARPALSAE-----TNRL------------------------ 637
Query: 245 RQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSI 304
L PMPSLDAIAMH+N + G L + SL K+E I
Sbjct: 638 -------------------CLLAEPMPSLDAIAMHMNITCGSLPCLPSLQKNE------I 672
Query: 305 FNFQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY------PT 358
Q + + +YRSVLVERN+FTS VKD LL N KSK LPPP PT
Sbjct: 673 LLGQNGDIQSPKRLCTEYRSVLVERNSFTSPVKDRLLTFNTPKSK-LPPPALQSAFASPT 731
Query: 359 RSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQR 418
R NPG GGE CAET IN+ F KI KL A RIN MVERLQLSQ+IRE ++ L ++ L+QR
Sbjct: 732 RPNPGAGGETCAETAINVFFSKIVKLGAFRINGMVERLQLSQEIREIIFRLF-QQILSQR 790
Query: 419 TSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-------- 470
T+LFFN HIDQIILCCFYGVAKISQL+LTFKEII PQCKPQVFRSVF
Sbjct: 791 TTLFFNRHIDQIILCCFYGVAKISQLSLTFKEIISTIESNPQCKPQVFRSVFVDWSSARR 850
Query: 471 ------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA--------S 516
+HVDIITFYN+IF P VKPLLVEL PVGTA K NR+SE + D S
Sbjct: 851 HGKTGQEHVDIITFYNEIFIPAVKPLLVELAPVGTAQK-NRNSETINGTDGQCPGSPKIS 909
Query: 517 VFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPF-KDLTD 575
FP+LPDMSPKKVSA H+VYVSPLR+S+MDALIS+ SKSYYACVGESTHAY KDLT
Sbjct: 910 PFPSLPDMSPKKVSAIHNVYVSPLRSSKMDALISNGSKSYYACVGESTHAYQSLSKDLTA 969
Query: 576 INHRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPEQLD 632
IN+RLN NR++RG LNFD +VDVGLVSD++V NSL+LQNGS A+S+ A +K E+LD
Sbjct: 970 INNRLNGNRKLRGTLNFD--EVDVGLVSDTLVANSLWLQNGSCASSSGAPVKSERLD 1024
>gi|387166314|gb|AFJ64569.1| retinoblastoma-related protein 1 [Brassica rapa]
Length = 1016
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/721 (58%), Positives = 465/721 (64%), Gaps = 150/721 (20%)
Query: 1 SSGSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHSSTSK---------MVVTPVSTA 51
SGSL GAVN+TG KRK DSL+SP +T SPLSPH S +K + TPVSTA
Sbjct: 355 GSGSLSAGAVNVTGVKRKIDSLSSPARTFISPLSPHKSPAAKTNTISGAIKLTATPVSTA 414
Query: 52 MTTAKWLRTIICPLPSKPS----------------------------------------- 70
MTTAKWLRT+ICPL KPS
Sbjct: 415 MTTAKWLRTVICPLLPKPSPGLEHFLKSCDRDITTDVTRRAHVILEAIFPNSSLGDRCAG 474
Query: 71 ADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
LQ NLMD+IWAEQRRLEA+KL Y+VLE MC AEAQ+LHA NL SL FHRCMLA
Sbjct: 475 GSLQPVNLMDDIWAEQRRLEAVKLYYRVLEAMCIAEAQILHANNLNSLLTNERFHRCMLA 534
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
CSAELVLATHK++TMLF AVLER GITAF+L KVI+SFIRHE+SLPRELRRHLNSLEERL
Sbjct: 535 CSAELVLATHKSITMLFPAVLERTGITAFDLCKVIESFIRHEDSLPRELRRHLNSLEERL 594
Query: 186 LESMVWEKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPT 244
LESMVWEKGSSMYNSL VARP L+ EIN LG
Sbjct: 595 LESMVWEKGSSMYNSLIVARPLLALEINRLGL---------------------------- 626
Query: 245 RQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSI 304
L PMPSLDAIA INFS G + S+ KHET P +
Sbjct: 627 ---------------------LAEPMPSLDAIAALINFSEGS-NHAPSIQKHETCPGQNG 664
Query: 305 FNFQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTR 359
C DYRS+LVERN+FTS VKD LL N+KSK LPPPL PTR
Sbjct: 665 DMKSPKRQC------TDYRSILVERNSFTSPVKDRLLAFGNVKSKMLPPPLQSAFASPTR 718
Query: 360 SNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRT 419
NPGGGGE CAETGINI F KINKLAAVRIN MVERLQLSQQIRESVY L + L QRT
Sbjct: 719 PNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYRLF-QHVLAQRT 777
Query: 420 SLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------- 470
SL FN HIDQIILCCFYGVAKISQ++LTF+EIIYNY KQPQCKP VFRSV+
Sbjct: 778 SLLFNRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVDSHQSRRQ 837
Query: 471 -------DHVDIITFYNKIFAPTVKPLLVELGPV--GTAMKTNRDSEVN--HNNDASVFP 519
DHVDIITFYN+IF P VKPLLVE+ PV AM+ N E + + SVFP
Sbjct: 838 GQGRVGPDHVDIITFYNEIFIPAVKPLLVEIIPVKKDQAMEANNKPEGHCPGSPKVSVFP 897
Query: 520 ALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINH 578
++PDMSPKKVSA H+VYVSPLR S+MDALISHSSKSYYACVGESTHAY SP KDL+ IN+
Sbjct: 898 SVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSSKSYYACVGESTHAYQSPSKDLSAINN 957
Query: 579 RLN--SNRRVRGALNFDDVDVDVGLVSDSMVVNSLYL----QNGS-AAASTCAVLKPEQL 631
RLN S R R L F D + GLVSDSMV NSLYL QNGS A++S A LK E +
Sbjct: 958 RLNNCSTNRKR-TLKF---DAEAGLVSDSMVGNSLYLQNQNQNGSDASSSGGAPLKTEPV 1013
Query: 632 D 632
D
Sbjct: 1014 D 1014
>gi|387166324|gb|AFJ64574.1| retinoblastoma-related protein 2 [Brassica juncea]
Length = 1016
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/721 (58%), Positives = 464/721 (64%), Gaps = 150/721 (20%)
Query: 1 SSGSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHSSTSK---------MVVTPVSTA 51
SGSL GAVN+TG KRK DSL+SP +T SPLSPH S +K + TPVSTA
Sbjct: 355 GSGSLSAGAVNVTGVKRKIDSLSSPARTFISPLSPHKSPAAKTNTISGAIKLTATPVSTA 414
Query: 52 MTTAKWLRTIICPLPSKPS----------------------------------------- 70
MTTAKWLRT+ICPL KPS
Sbjct: 415 MTTAKWLRTVICPLLPKPSPGLEHFLKSCDRDITTDVTRRAHVILEAIFPNSSLGDRCAG 474
Query: 71 ADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
LQ NLMD+IWAEQRRLEA+KL Y+VLE MC AEAQ+LHA NL SL FHRCMLA
Sbjct: 475 GSLQPVNLMDDIWAEQRRLEAVKLCYRVLEAMCIAEAQILHANNLNSLLTNERFHRCMLA 534
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
CSAELVLATHK++TMLF AVLER GITAF+L KVI+SFIRHE+SLPRELRRHLNSLEERL
Sbjct: 535 CSAELVLATHKSITMLFPAVLERTGITAFDLCKVIESFIRHEDSLPRELRRHLNSLEERL 594
Query: 186 LESMVWEKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPT 244
LESMVWEKGSSMYNSL VARP L+ EIN LG
Sbjct: 595 LESMVWEKGSSMYNSLIVARPLLALEINRLGL---------------------------- 626
Query: 245 RQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSI 304
L PMPSLDAIA INFS G + S+ KHET P +
Sbjct: 627 ---------------------LAEPMPSLDAIAALINFSEGS-NHAPSIQKHETCPGQNG 664
Query: 305 FNFQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTR 359
C DYRS+LVERN+FTS VKD LL N+KSK LPPPL PTR
Sbjct: 665 DMKSPKRQC------TDYRSILVERNSFTSPVKDRLLAFGNVKSKMLPPPLQSAFASPTR 718
Query: 360 SNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRT 419
NPGGGGE CAETGINI F KINKLAAVRIN MVERLQLSQQIRESVY L + L QRT
Sbjct: 719 PNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYRLF-QHVLAQRT 777
Query: 420 SLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------- 470
SL FN HIDQIILCCFYGVAKISQ++LTF+EIIYNY KQPQCKP VFRSV+
Sbjct: 778 SLLFNRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVDSHQSRRQ 837
Query: 471 -------DHVDIITFYNKIFAPTVKPLLVELGPV--GTAMKTNRDSEVN--HNNDASVFP 519
DHVDIITFYN+IF P VKPLLVE+ PV AM+ N E + + SVFP
Sbjct: 838 GQGRVGPDHVDIITFYNEIFIPAVKPLLVEIIPVKKDQAMEANNKPEGHCPGSPKVSVFP 897
Query: 520 ALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINH 578
++PDMSPKKVSA H+VYVSPLR S+MDALISHSSKSYYACVGESTHAY SP KDL+ IN+
Sbjct: 898 SVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSSKSYYACVGESTHAYQSPPKDLSAINN 957
Query: 579 RLN--SNRRVRGALNFDDVDVDVGLVSDSMVVNSLYL----QNGS-AAASTCAVLKPEQL 631
RLN S R R L F D + GLVSDSMV NSLYL QNGS A +S A LK E +
Sbjct: 958 RLNNCSTNRKR-TLKF---DAEAGLVSDSMVGNSLYLQNQNQNGSDALSSGGAPLKTEPV 1013
Query: 632 D 632
D
Sbjct: 1014 D 1014
>gi|387166318|gb|AFJ64571.1| retinoblastoma-related protein 1 [Brassica nigra]
Length = 1017
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/722 (58%), Positives = 466/722 (64%), Gaps = 151/722 (20%)
Query: 1 SSGSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHSSTSK---------MVVTPVSTA 51
SGSL GAVN++G KRK DSL+SP +T SPLSPH S +K + TPVSTA
Sbjct: 355 GSGSLSAGAVNVSGVKRKIDSLSSPARTFISPLSPHKSPAAKTNNISGGIKLTATPVSTA 414
Query: 52 MTTAKWLRTIICPLPSKPS----------------------------------------- 70
MTTAKWLRT+ICPL KPS
Sbjct: 415 MTTAKWLRTVICPLLPKPSPGLEHFPQSCDRDITTDITRRAHVILEAIFPNSSLGDRCAG 474
Query: 71 ADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
LQ NLMD+IWA+QRRLEA+KL ++VLE MC AEAQ+LHA NL SL FHRCMLA
Sbjct: 475 GSLQPVNLMDDIWAQQRRLEAVKLYFRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLA 534
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
CSAELVLATHK++TMLF AVLER GITAF+L KVI+SFIRHE+SLPRELRRHLNSLEERL
Sbjct: 535 CSAELVLATHKSITMLFPAVLERTGITAFDLCKVIESFIRHEDSLPRELRRHLNSLEERL 594
Query: 186 LESMVWEKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPT 244
LESMVWEKGSSMYNSL VARP L+ EIN LG
Sbjct: 595 LESMVWEKGSSMYNSLIVARPLLALEINRLGL---------------------------- 626
Query: 245 RQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSI 304
L PMPSLDAIA INFS G L+ S+ KHET P +
Sbjct: 627 ---------------------LAEPMPSLDAIAALINFSEG-LNHAPSVQKHETCPGQNG 664
Query: 305 FNFQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTR 359
C DYRS+LVERN+FTS VKD LL N+KSK LPPPL PTR
Sbjct: 665 DIKSPKRQC------TDYRSILVERNSFTSPVKDRLLAFGNVKSKMLPPPLQSAFASPTR 718
Query: 360 SNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRT 419
NPGGGGE CAETGINI F KINKLAAVRIN MVERLQLSQQIRESVY L + L QRT
Sbjct: 719 PNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYRLF-QHVLAQRT 777
Query: 420 SLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------- 470
SL FN HIDQIILCCFYGVAKISQ++LTF+EIIYNY KQPQCKP VFRSV+
Sbjct: 778 SLLFNRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVDSYQCRRQ 837
Query: 471 -------DHVDIITFYNKIFAPTVKPLLVELGPVGT--AMKTNRDSEVNH--NNDASVFP 519
DHVDIITFYN+IF P VKPLLVE+ PV +M+ N E + SVFP
Sbjct: 838 GQGRVGPDHVDIITFYNEIFIPAVKPLLVEIIPVKNDQSMEANNKPEGQRPGSPKVSVFP 897
Query: 520 ALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINH 578
++PDMSPKKVSA H+VYVSPLR S+MDALISHSSKSYYACVGESTHAY SP KDL+ IN+
Sbjct: 898 SVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSSKSYYACVGESTHAYQSPSKDLSAINN 957
Query: 579 RLN--SNRRVRGALNFDDVDVDVGLVSDSMVVNSLYL----QNGSAAAST--CAVLKPEQ 630
RLN S R R L F DV+ GLVSDSMV NSLYL QNG+ A+S+ A LK E
Sbjct: 958 RLNNCSTNRKR-TLKF---DVEAGLVSDSMVGNSLYLQNQNQNGNDASSSGGGAPLKTEP 1013
Query: 631 LD 632
+D
Sbjct: 1014 VD 1015
>gi|387166322|gb|AFJ64573.1| retinoblastoma-related protein 1 [Brassica juncea]
Length = 1017
Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/722 (58%), Positives = 466/722 (64%), Gaps = 151/722 (20%)
Query: 1 SSGSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHSSTSK---------MVVTPVSTA 51
SGSL GAVN++G KRK DSL+SP +T SPLSPH S +K + TPVSTA
Sbjct: 355 GSGSLSAGAVNVSGVKRKIDSLSSPARTFISPLSPHKSPAAKTNNISGGIKLTATPVSTA 414
Query: 52 MTTAKWLRTIICPLPSKPS----------------------------------------- 70
MTTAKWLRT+ICPL KPS
Sbjct: 415 MTTAKWLRTVICPLLPKPSPGLEHFLKSCDRDITTDITRRAHVILEAIFPNSSLGDRCAG 474
Query: 71 ADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
LQ NLMD+IWA+QRRLEA+KL ++VLE MC AEAQ+LHA NL SL FHRCMLA
Sbjct: 475 GSLQPVNLMDDIWAQQRRLEAVKLYFRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLA 534
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
CSAELVLATHK++TMLF AVLER GITAF+L KVI+SFIRHE+SLPRELRRHLNSLEERL
Sbjct: 535 CSAELVLATHKSITMLFPAVLERTGITAFDLCKVIESFIRHEDSLPRELRRHLNSLEERL 594
Query: 186 LESMVWEKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPT 244
LESMVWEKGSSMYNSL VARP L+ EIN LG
Sbjct: 595 LESMVWEKGSSMYNSLIVARPLLALEINRLGL---------------------------- 626
Query: 245 RQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSI 304
L PMPSLDAIA INFS G L+ S+ KHET P +
Sbjct: 627 ---------------------LAEPMPSLDAIAALINFSEG-LNHAPSVQKHETCPGQNG 664
Query: 305 FNFQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTR 359
C DYRS+LVERN+FTS VKD LL N+KSK LPPPL PTR
Sbjct: 665 DIKSPKRQC------TDYRSILVERNSFTSPVKDRLLAFGNVKSKMLPPPLQSAFASPTR 718
Query: 360 SNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRT 419
NPGGGGE CAETGINI F KINKLAAVRIN MVERLQLSQQIRESVY L + L QRT
Sbjct: 719 PNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYRLF-QHVLAQRT 777
Query: 420 SLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------- 470
SL FN HIDQIILCCFYGVAKISQ++LTF+EIIYNY KQPQCKP VFRSV+
Sbjct: 778 SLLFNRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVDSYQCRRQ 837
Query: 471 -------DHVDIITFYNKIFAPTVKPLLVELGPVGT--AMKTNRDSEVNH--NNDASVFP 519
DHVDIITFYN+IF P VKPLLVE+ PV +M+ N E + SVFP
Sbjct: 838 GQGRVGPDHVDIITFYNEIFIPAVKPLLVEIIPVKNDQSMEANNKPEGQRPGSPKVSVFP 897
Query: 520 ALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINH 578
++PDMSPKKVSA H+VYVSPLR S+MDALISHSSKSYYACVGESTHAY SP KDL+ IN+
Sbjct: 898 SVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSSKSYYACVGESTHAYQSPSKDLSAINN 957
Query: 579 RLN--SNRRVRGALNFDDVDVDVGLVSDSMVVNSLYL----QNGSAAAST--CAVLKPEQ 630
RLN S R R L F DV+ GLVSDSMV NSLYL QNG+ A+S+ A LK E
Sbjct: 958 RLNNCSTNRKR-TLKF---DVEAGLVSDSMVGNSLYLQNQNQNGNDASSSGGGAPLKTEP 1013
Query: 631 LD 632
+D
Sbjct: 1014 VD 1015
>gi|297834028|ref|XP_002884896.1| hypothetical protein ARALYDRAFT_478590 [Arabidopsis lyrata subsp.
lyrata]
gi|297330736|gb|EFH61155.1| hypothetical protein ARALYDRAFT_478590 [Arabidopsis lyrata subsp.
lyrata]
Length = 1012
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/695 (58%), Positives = 456/695 (65%), Gaps = 149/695 (21%)
Query: 1 SSGSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHS---------STSKMVVTPVSTA 51
SGSL GAVNITG KRK D+L+SP +T+ SPLSPH S +K+ TPVSTA
Sbjct: 352 GSGSLSAGAVNITGVKRKIDALSSPARTLISPLSPHKSPAAKTNGISGATKLAATPVSTA 411
Query: 52 MTTAKWLRTIICPLPSKPS----------------------------------------- 70
MTTAKWLRT+ICPL KPS
Sbjct: 412 MTTAKWLRTVICPLLPKPSPGLEHFLKSCDRDITNDVTRRAHIILEAIFPNSSLGAQCGG 471
Query: 71 ADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
LQ +LMD+IWAEQRRLEALKL Y+VLE MC AEAQ+LHA NL SL FHRCMLA
Sbjct: 472 GSLQAVDLMDDIWAEQRRLEALKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLA 531
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
CSAELVLATHKT+TMLF AVLER GITAF+LSKVI+SFIRHE+SLPRELRRHLNSLEERL
Sbjct: 532 CSAELVLATHKTITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLEERL 591
Query: 186 LESMVWEKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPT 244
LESMVWEKGSSMYNSL VARP+L+ EIN LG
Sbjct: 592 LESMVWEKGSSMYNSLIVARPSLALEINQLGL---------------------------- 623
Query: 245 RQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSI 304
L PMPSLDAIA INFS G ++ S+ KHET CS
Sbjct: 624 ---------------------LAEPMPSLDAIAALINFSEG-VNHASSIQKHET---CSG 658
Query: 305 FNFQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTR 359
N + + + DYRS+LVERN+FTS VKD LL L N+KSK LPPPL PTR
Sbjct: 659 QNGGIRSP---KRLCTDYRSILVERNSFTSPVKDRLLALGNVKSKMLPPPLQSAFASPTR 715
Query: 360 SNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRT 419
NPGGGGE CAETGINI F KINKLAAVRIN MVERLQLSQQIRESVYC + L QRT
Sbjct: 716 PNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYCFF-QHVLAQRT 774
Query: 420 SLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------- 470
SL F+ HIDQIILCCFYGV+KISQ++LTF+EIIYNY KQPQCKP VFRSV+
Sbjct: 775 SLLFSRHIDQIILCCFYGVSKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVDSLQCRRQ 834
Query: 471 -----DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA--------SV 517
DHVDIITFYN+IF P VKPLLVELGPV + +R E N+ + SV
Sbjct: 835 GRIGPDHVDIITFYNEIFIPAVKPLLVELGPV----RNDRAVEANNKPEGQCPGSPKVSV 890
Query: 518 FPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDI 576
FP++PDMSPKKVSA H+VYVSPLR S+MDALISHS+KSYYACVGESTHAY SP KDL+ I
Sbjct: 891 FPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSTKSYYACVGESTHAYQSPSKDLSAI 950
Query: 577 -NHRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNS 610
N NS+ + LNF DV+ GLVSDSMV NS
Sbjct: 951 NNRLNNSSSNRKRTLNF---DVEAGLVSDSMVANS 982
>gi|12322049|gb|AAG51072.1|AC069472_12 retinoblastoma-related protein, putative; 44014-38352 [Arabidopsis
thaliana]
Length = 1088
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/694 (58%), Positives = 452/694 (65%), Gaps = 148/694 (21%)
Query: 1 SSGSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHS---------STSKMVVTPVSTA 51
SGSL GAVNITG KRK D+L+SP +T SPLSPH S +K+ TPVSTA
Sbjct: 428 GSGSLSAGAVNITGVKRKIDALSSPARTFISPLSPHKSPAAKTNGISGATKLAATPVSTA 487
Query: 52 MTTAKWLRTIICPLPSKPS----------------------------------------- 70
MTTAKWLRT+I PL KPS
Sbjct: 488 MTTAKWLRTVISPLLPKPSPGLEHFLKSCDRDITNDVTRRAHIILEAIFPNSSLGAQCGG 547
Query: 71 ADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
LQ +LMD+IWAEQRRLEA KL Y+VLE MC AEAQ+LHA NL SL FHRCMLA
Sbjct: 548 GSLQAVDLMDDIWAEQRRLEACKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLA 607
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
CSAELVLATHKT+TMLF AVLER GITAF+LSKVI+SFIRHE+SLPRELRRHLNSLEERL
Sbjct: 608 CSAELVLATHKTITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLEERL 667
Query: 186 LESMVWEKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPT 244
LESMVWEKGSSMYNSL VARP+L+ EIN LG
Sbjct: 668 LESMVWEKGSSMYNSLIVARPSLALEINQLGL---------------------------- 699
Query: 245 RQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSI 304
L PMPSLDAIA INFS G + S+ KHET P
Sbjct: 700 ---------------------LAEPMPSLDAIAALINFSDGA-NHASSVQKHETCP---- 733
Query: 305 FNFQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTR 359
Q + + DYRS+LVERN+FTS VKD LL L N+KSK LPPPL PTR
Sbjct: 734 --GQNGGIRSPKRLCTDYRSILVERNSFTSPVKDRLLALGNVKSKMLPPPLQSAFASPTR 791
Query: 360 SNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRT 419
NPGGGGE CAETGINI F KINKLAAVRIN MVERLQLSQQIRESVYC + L QRT
Sbjct: 792 PNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYCFF-QHVLAQRT 850
Query: 420 SLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------- 470
SL F+ HIDQIILCCFYGVAKISQ++LTF+EIIYNY KQPQCKP VFRSV+
Sbjct: 851 SLLFSRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVDALQCRRQ 910
Query: 471 -----DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA--------SV 517
DHVDIITFYN+IF P VKPLLVELGPV + +R E N+ + SV
Sbjct: 911 GRIGPDHVDIITFYNEIFIPAVKPLLVELGPV----RNDRAVEANNKPEGQCPGSPKVSV 966
Query: 518 FPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDI 576
FP++PDMSPKKVSA H+VYVSPLR S+MDALISHS+KSYYACVGESTHAY SP KDL+ I
Sbjct: 967 FPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSTKSYYACVGESTHAYQSPSKDLSAI 1026
Query: 577 NHRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNS 610
N+RLN++ + LNF D + G+VSDSMV NS
Sbjct: 1027 NNRLNNSSNRKRTLNF---DAEAGMVSDSMVANS 1057
>gi|334185278|ref|NP_001189868.1| Retinoblastoma-related protein 1 [Arabidopsis thaliana]
gi|332641659|gb|AEE75180.1| Retinoblastoma-related protein 1 [Arabidopsis thaliana]
Length = 1012
Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/694 (58%), Positives = 452/694 (65%), Gaps = 148/694 (21%)
Query: 1 SSGSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHS---------STSKMVVTPVSTA 51
SGSL GAVNITG KRK D+L+SP +T SPLSPH S +K+ TPVSTA
Sbjct: 352 GSGSLSAGAVNITGVKRKIDALSSPARTFISPLSPHKSPAAKTNGISGATKLAATPVSTA 411
Query: 52 MTTAKWLRTIICPLPSKPS----------------------------------------- 70
MTTAKWLRT+I PL KPS
Sbjct: 412 MTTAKWLRTVISPLLPKPSPGLEHFLKSCDRDITNDVTRRAHIILEAIFPNSSLGAQCGG 471
Query: 71 ADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
LQ +LMD+IWAEQRRLEA KL Y+VLE MC AEAQ+LHA NL SL FHRCMLA
Sbjct: 472 GSLQAVDLMDDIWAEQRRLEACKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLA 531
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
CSAELVLATHKT+TMLF AVLER GITAF+LSKVI+SFIRHE+SLPRELRRHLNSLEERL
Sbjct: 532 CSAELVLATHKTITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLEERL 591
Query: 186 LESMVWEKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPT 244
LESMVWEKGSSMYNSL VARP+L+ EIN LG
Sbjct: 592 LESMVWEKGSSMYNSLIVARPSLALEINQLGL---------------------------- 623
Query: 245 RQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSI 304
L PMPSLDAIA INFS G + S+ KHET P
Sbjct: 624 ---------------------LAEPMPSLDAIAALINFSDGA-NHASSVQKHETCP---- 657
Query: 305 FNFQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTR 359
Q + + DYRS+LVERN+FTS VKD LL L N+KSK LPPPL PTR
Sbjct: 658 --GQNGGIRSPKRLCTDYRSILVERNSFTSPVKDRLLALGNVKSKMLPPPLQSAFASPTR 715
Query: 360 SNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRT 419
NPGGGGE CAETGINI F KINKLAAVRIN MVERLQLSQQIRESVYC + L QRT
Sbjct: 716 PNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYCFF-QHVLAQRT 774
Query: 420 SLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------- 470
SL F+ HIDQIILCCFYGVAKISQ++LTF+EIIYNY KQPQCKP VFRSV+
Sbjct: 775 SLLFSRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVDALQCRRQ 834
Query: 471 -----DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA--------SV 517
DHVDIITFYN+IF P VKPLLVELGPV + +R E N+ + SV
Sbjct: 835 GRIGPDHVDIITFYNEIFIPAVKPLLVELGPV----RNDRAVEANNKPEGQCPGSPKVSV 890
Query: 518 FPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDI 576
FP++PDMSPKKVSA H+VYVSPLR S+MDALISHS+KSYYACVGESTHAY SP KDL+ I
Sbjct: 891 FPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSTKSYYACVGESTHAYQSPSKDLSAI 950
Query: 577 NHRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNS 610
N+RLN++ + LNF D + G+VSDSMV NS
Sbjct: 951 NNRLNNSSNRKRTLNF---DAEAGMVSDSMVANS 981
>gi|387166320|gb|AFJ64572.1| retinoblastoma-related protein 2 [Brassica nigra]
Length = 1023
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/713 (57%), Positives = 453/713 (63%), Gaps = 160/713 (22%)
Query: 1 SSGSLFGGAVNIT-GAKRKFDSLASPVKTITSPLSPHHSSTSK---------MVVTPVST 50
SGSL GAVN+T G KRK DSL+SP +T SPLSPH S +K + TPVST
Sbjct: 355 GSGSLSAGAVNVTTGVKRKIDSLSSPARTFISPLSPHKSPAAKTTITSGGNKLTATPVST 414
Query: 51 AMTTAKWLRTIICPLPSKPS---------------------------------------- 70
AMTTAKWLRT+ICPLPSKPS
Sbjct: 415 AMTTAKWLRTVICPLPSKPSPGLEHFLKSCDRDITHDVTRRAHVILEAIFPNSSLGDQCA 474
Query: 71 -ADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
LQ NLMD+IWA+QRRLEA+KL Y+VLE MC AEAQ+LH NL SL FHRCML
Sbjct: 475 GGSLQPVNLMDDIWAQQRRLEAVKLYYRVLEAMCKAEAQILHVNNLNSLLTNERFHRCML 534
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
ACSAELVLATHK++TMLF AVLER GITAF+LSKVI+SFIRHE+SLPRELRRHLNSLEER
Sbjct: 535 ACSAELVLATHKSITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLEER 594
Query: 185 LLESMVWEKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSP 243
LLESMVWEKGSSMYNSL VA+P+L+ EIN LG
Sbjct: 595 LLESMVWEKGSSMYNSLIVAKPSLALEINRLGL--------------------------- 627
Query: 244 TRQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCS 303
L PMPSLDAIA INFS G + S+ K E P
Sbjct: 628 ----------------------LAEPMPSLDAIAALINFSEGSSNHASSIQKPEAGP--- 662
Query: 304 IFNFQFYANCYGEL-----VTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-- 356
G++ + DYRS+LVER++F S VKD LL L N+KSK LPPPL
Sbjct: 663 --------GQNGDIKSPKRLCTDYRSILVERSSFASPVKDRLLALGNVKSKTLPPPLQSA 714
Query: 357 ---PTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKR 413
PTR NPGGGGE CAETGINI F KINKLAAVRIN MVERLQLSQQIRESVYCL +R
Sbjct: 715 FATPTRPNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYCLF-QR 773
Query: 414 TLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--- 470
L QRTSL FN HIDQIILCCFYGVAKISQ++LTF+EIIYNY KQPQCKP VFRSVF
Sbjct: 774 VLAQRTSLLFNRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVFVDS 833
Query: 471 -----------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA---- 515
DHVDIITFYN IF P VKPLLVE+ PV K ++ E N N +
Sbjct: 834 SHCRRQGRVGPDHVDIITFYNDIFIPAVKPLLVEIVPV----KKDQAVEANKNPEGTCPG 889
Query: 516 ----SVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPF 570
SVFP++PDMSPKKVSA H+VYVSPLR S+MDALISHSSKSYYACVGESTHAY SP
Sbjct: 890 SPKVSVFPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSSKSYYACVGESTHAYQSPS 949
Query: 571 KDLTDI--NHRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAAS 621
KDL+ I N++ + L F DV+ GLVSDSMV NSLY AS
Sbjct: 950 KDLSAINNRLNNNNSSNRKRTLKF---DVEAGLVSDSMVGNSLYQNQNETDAS 999
>gi|15795149|dbj|BAB03137.1| retinoblastoma-related protein [Arabidopsis thaliana]
Length = 1021
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/695 (58%), Positives = 449/695 (64%), Gaps = 149/695 (21%)
Query: 1 SSGSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHS---------STSKMVVTPVSTA 51
SGSL GAVNITG KRK D+L+SP +T SPLSPH S +K+ TPVSTA
Sbjct: 360 GSGSLSAGAVNITGVKRKIDALSSPARTFISPLSPHKSPAAKTNGISGATKLAATPVSTA 419
Query: 52 MTTAKWLRTIICPLPSKPS----------------------------------------- 70
MTTAKWLRT+I PL KPS
Sbjct: 420 MTTAKWLRTVISPLLPKPSPGLEHFLKSCDRDITNDVTRRAHIILEAIFPNSSLGAQCGG 479
Query: 71 ADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
LQ +LMD+IWAEQRRLEA KL Y+VLE MC AEAQ+LHA NL SL FHRCMLA
Sbjct: 480 GSLQAVDLMDDIWAEQRRLEACKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLA 539
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
CSAELVLATHKT+TMLF AVLER GITAF+LSKVI+SFIRHE+SLPRELRRHLNSLEERL
Sbjct: 540 CSAELVLATHKTITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLEERL 599
Query: 186 LESMVWEKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPT 244
LESMVWEKGSSMYNSL VARP+L+ EIN LG
Sbjct: 600 LESMVWEKGSSMYNSLIVARPSLALEINQLGL---------------------------- 631
Query: 245 RQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSI 304
L PMPSLDAIA INFS G + S+ KHET P
Sbjct: 632 ---------------------LAEPMPSLDAIAALINFSDGA-NHASSVQKHETCP---- 665
Query: 305 FNFQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTR 359
Q + + DYRS+LVERN+FTS VKD LL L N+KSK LPPPL PTR
Sbjct: 666 --GQNGGIRSPKRLCTDYRSILVERNSFTSPVKDRLLALGNVKSKMLPPPLQSAFASPTR 723
Query: 360 SNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRT 419
NPGGGGE CAETGINI F KINKLAAVRIN MVERLQLSQQIRESVYC + L QRT
Sbjct: 724 PNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYCFF-QHVLAQRT 782
Query: 420 SLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------- 470
SL F+ HIDQIILCCFYGVAKISQ++LTF+EIIYNY KQPQCKP VFRSV+
Sbjct: 783 SLLFSRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVDALQCRRQ 842
Query: 471 -----DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA--------SV 517
DHVDIITFYN+IF P VKPLLVELGPV + +R E N+ + SV
Sbjct: 843 GRIGPDHVDIITFYNEIFIPAVKPLLVELGPV----RNDRAVEANNKPEGQCPGSPKVSV 898
Query: 518 FPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDI 576
FP++PDMSPKKVSA H+VYVSPLR S+MDALISHS+KSYYACVGESTHAY SP KDL+ I
Sbjct: 899 FPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSTKSYYACVGESTHAYQSPSKDLSAI 958
Query: 577 -NHRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNS 610
N NS+ + LNF D + G+VSDSMV NS
Sbjct: 959 NNRLNNSSSNRKRTLNF---DAEAGMVSDSMVANS 990
>gi|30682129|ref|NP_566417.3| Retinoblastoma-related protein 1 [Arabidopsis thaliana]
gi|75263948|sp|Q9LKZ3.1|RBR1_ARATH RecName: Full=Retinoblastoma-related protein 1; Short=AtRBR;
Short=AtRBR1
gi|8777927|gb|AAF79146.1|AF245395_1 retinoblastoma-related protein [Arabidopsis thaliana]
gi|23297484|gb|AAN12980.1| putative retinoblastoma-related protein [Arabidopsis thaliana]
gi|332641658|gb|AEE75179.1| Retinoblastoma-related protein 1 [Arabidopsis thaliana]
Length = 1013
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/695 (58%), Positives = 449/695 (64%), Gaps = 149/695 (21%)
Query: 1 SSGSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHS---------STSKMVVTPVSTA 51
SGSL GAVNITG KRK D+L+SP +T SPLSPH S +K+ TPVSTA
Sbjct: 352 GSGSLSAGAVNITGVKRKIDALSSPARTFISPLSPHKSPAAKTNGISGATKLAATPVSTA 411
Query: 52 MTTAKWLRTIICPLPSKPS----------------------------------------- 70
MTTAKWLRT+I PL KPS
Sbjct: 412 MTTAKWLRTVISPLLPKPSPGLEHFLKSCDRDITNDVTRRAHIILEAIFPNSSLGAQCGG 471
Query: 71 ADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
LQ +LMD+IWAEQRRLEA KL Y+VLE MC AEAQ+LHA NL SL FHRCMLA
Sbjct: 472 GSLQAVDLMDDIWAEQRRLEACKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLA 531
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
CSAELVLATHKT+TMLF AVLER GITAF+LSKVI+SFIRHE+SLPRELRRHLNSLEERL
Sbjct: 532 CSAELVLATHKTITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLEERL 591
Query: 186 LESMVWEKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPT 244
LESMVWEKGSSMYNSL VARP+L+ EIN LG
Sbjct: 592 LESMVWEKGSSMYNSLIVARPSLALEINQLGL---------------------------- 623
Query: 245 RQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSI 304
L PMPSLDAIA INFS G + S+ KHET P
Sbjct: 624 ---------------------LAEPMPSLDAIAALINFSDGA-NHASSVQKHETCP---- 657
Query: 305 FNFQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTR 359
Q + + DYRS+LVERN+FTS VKD LL L N+KSK LPPPL PTR
Sbjct: 658 --GQNGGIRSPKRLCTDYRSILVERNSFTSPVKDRLLALGNVKSKMLPPPLQSAFASPTR 715
Query: 360 SNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRT 419
NPGGGGE CAETGINI F KINKLAAVRIN MVERLQLSQQIRESVYC + L QRT
Sbjct: 716 PNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYCFF-QHVLAQRT 774
Query: 420 SLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------- 470
SL F+ HIDQIILCCFYGVAKISQ++LTF+EIIYNY KQPQCKP VFRSV+
Sbjct: 775 SLLFSRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVDALQCRRQ 834
Query: 471 -----DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA--------SV 517
DHVDIITFYN+IF P VKPLLVELGPV + +R E N+ + SV
Sbjct: 835 GRIGPDHVDIITFYNEIFIPAVKPLLVELGPV----RNDRAVEANNKPEGQCPGSPKVSV 890
Query: 518 FPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDI 576
FP++PDMSPKKVSA H+VYVSPLR S+MDALISHS+KSYYACVGESTHAY SP KDL+ I
Sbjct: 891 FPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSTKSYYACVGESTHAYQSPSKDLSAI 950
Query: 577 -NHRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNS 610
N NS+ + LNF D + G+VSDSMV NS
Sbjct: 951 NNRLNNSSSNRKRTLNF---DAEAGMVSDSMVANS 982
>gi|387166326|gb|AFJ64575.1| retinoblastoma-related protein 3 [Brassica juncea]
Length = 1021
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/720 (56%), Positives = 457/720 (63%), Gaps = 163/720 (22%)
Query: 1 SSGSLFGGAVNIT-GAKRKFDSLASPVKTITSPLSPHHSSTSK---------MVVTPVST 50
SGSL GAVNIT G KRK DSL+SP +T SPLSPH S +K + TPVST
Sbjct: 355 GSGSLSAGAVNITTGVKRKIDSLSSPARTFISPLSPHKSPAAKTTITSGGNKLTATPVST 414
Query: 51 AMTTAKWLRTIICPLPSKPS---------------------------------------- 70
AMTTAKWLRT+ICPL KPS
Sbjct: 415 AMTTAKWLRTVICPLLPKPSPGLELFLKSCDRDITNDVTRRAHVILEAIFPNSSLGDQCA 474
Query: 71 -ADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
LQ NLMD+IWA+QRRLEA+KL Y+VLE MC AEAQ+LH NL SL FHRCML
Sbjct: 475 GGSLQPVNLMDDIWAQQRRLEAVKLYYRVLEAMCKAEAQILHVNNLNSLLTNERFHRCML 534
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
ACSAELVLATHK++TMLF AVLER GITAF+LSKVI+SFIRHE+SLPRELRRHLNSLEER
Sbjct: 535 ACSAELVLATHKSITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLEER 594
Query: 185 LLESMVWEKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSP 243
LLESMVWEKGSSMYNSL VA+P+L+ EIN LG
Sbjct: 595 LLESMVWEKGSSMYNSLIVAKPSLALEINRLGL--------------------------- 627
Query: 244 TRQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCS 303
L PMPSLDAIA INFS G + S+ K E
Sbjct: 628 ----------------------LAEPMPSLDAIAALINFSEGSSNHASSIQKPEAGQNGD 665
Query: 304 IFNFQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PT 358
I + + L TD YRS+LVER++F S VKD LL L N+KSK LPPPL PT
Sbjct: 666 IKSLK-------RLCTD-YRSILVERSSFASPVKDRLLALGNVKSKTLPPPLQSAFATPT 717
Query: 359 RSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQR 418
R NPGGGGE CAETGINI F KINKLAAVRIN MVERLQLSQQIRESVYCL +R L QR
Sbjct: 718 RPNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYCLF-QRVLAQR 776
Query: 419 TSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-------- 470
TSL FN HIDQIILCCFYGVAKISQ++LTF+EIIYNY KQPQCKP VFRSVF
Sbjct: 777 TSLLFNRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVFVDSSHCRR 836
Query: 471 ------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA--------S 516
DHVDIITFYN +F P VKPLLVE+ PV K ++ E N N + S
Sbjct: 837 QGRVGPDHVDIITFYNDVFIPAVKPLLVEIVPV----KKDQAVEANKNPEGTCPGSPKVS 892
Query: 517 VFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTD 575
VFP++PDMSPKKVSA H+VYVSPLR S+MDALISHSSKSYYACVGESTHAY SP KDL+
Sbjct: 893 VFPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSSKSYYACVGESTHAYQSPSKDLSA 952
Query: 576 I--NHRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNSLYL-----------QNGSAAAST 622
I N++ + L F DV+ GLVSD MV NSLY+ QNGS A+S+
Sbjct: 953 INNRLNNNNSSNRKRTLKF---DVEAGLVSDPMVGNSLYVPNQNQDASNQNQNGSDASSS 1009
>gi|15810509|gb|AAL07142.1| putative retinoblastoma-related protein [Arabidopsis thaliana]
Length = 1013
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/695 (58%), Positives = 449/695 (64%), Gaps = 149/695 (21%)
Query: 1 SSGSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHS---------STSKMVVTPVSTA 51
SGSL GAVNITG KRK D+L+SP +T SPLSPH S +K+ TPVSTA
Sbjct: 352 GSGSLSAGAVNITGVKRKIDALSSPARTFISPLSPHKSPAAKTNGISGATKLAATPVSTA 411
Query: 52 MTTAKWLRTIICPLPSKPS----------------------------------------- 70
MTTAKWLRT+I PL KPS
Sbjct: 412 MTTAKWLRTVISPLLPKPSPGLEHFLKSCDRDITNDVTRRAHIILEAIFPNSSLGAQCGG 471
Query: 71 ADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
LQ +LMD+IWAEQRRLEA KL Y+VLE MC AEAQ+LHA NL SL FHRCMLA
Sbjct: 472 GSLQAVDLMDDIWAEQRRLEACKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLA 531
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
CSAELVLATHKT+TMLF AVLER GITAF+LSKVI+SFIRHE+SLPRELRRHLNSLEERL
Sbjct: 532 CSAELVLATHKTITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLEERL 591
Query: 186 LESMVWEKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPT 244
LESMVWEKGSSMYNSL VARP+L+ EIN LG
Sbjct: 592 LESMVWEKGSSMYNSLIVARPSLALEINQLGL---------------------------- 623
Query: 245 RQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSI 304
L P+PSLDAIA INFS G + S+ KHET P
Sbjct: 624 ---------------------LAEPIPSLDAIAALINFSDGA-NHASSVQKHETCP---- 657
Query: 305 FNFQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTR 359
Q + + DYRS+LVERN+FTS VKD LL L N+KSK LPPPL PTR
Sbjct: 658 --GQNGGIRSPKRLCTDYRSILVERNSFTSPVKDRLLALGNVKSKMLPPPLQSAFASPTR 715
Query: 360 SNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRT 419
NPGGGGE CAETGINI F KINKLAAVRIN MVERLQLSQQIRESVYC + L QRT
Sbjct: 716 PNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYCFF-QHVLAQRT 774
Query: 420 SLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------- 470
SL F+ HIDQIILCCFYGVAKISQ++LTF+EIIYNY KQPQCKP VFRSV+
Sbjct: 775 SLLFSRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVDALQCRRQ 834
Query: 471 -----DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA--------SV 517
DHVDIITFYN+IF P VKPLLVELGPV + +R E N+ + SV
Sbjct: 835 GRIGPDHVDIITFYNEIFIPAVKPLLVELGPV----RNDRAVEANNKPEGQCPGSPKVSV 890
Query: 518 FPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDI 576
FP++PDMSPKKVSA H+VYVSPLR S+MDALISHS+KSYYACVGESTHAY SP KDL+ I
Sbjct: 891 FPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSTKSYYACVGESTHAYQSPSKDLSAI 950
Query: 577 -NHRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNS 610
N NS+ + LNF D + G+VSDSMV NS
Sbjct: 951 NNRLNNSSSNRKRTLNF---DAEAGMVSDSMVANS 982
>gi|387166316|gb|AFJ64570.1| retinoblastoma-related protein 2 [Brassica rapa]
Length = 1019
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/718 (56%), Positives = 456/718 (63%), Gaps = 160/718 (22%)
Query: 1 SSGSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHSSTSKMVVT--PVSTAMTTAKWL 58
SGSL GAVN+TGAKRK DSL+SP +T SPLSPH S +K VT PVSTAMTTAKWL
Sbjct: 355 GSGSLSAGAVNLTGAKRKIDSLSSPARTFISPLSPHKSPAAKSTVTATPVSTAMTTAKWL 414
Query: 59 RTIICPLPSKPS-----------------------------------------ADLQGAN 77
RT+ICPLP KPS LQ N
Sbjct: 415 RTVICPLPPKPSPGLELFLKSCDRDITNDVTRRAHVILEAIFPNSSLGDQCAGGSLQPVN 474
Query: 78 LMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVL 132
LMD+IWA+QRRLEA+KL Y+VLE MC AEAQ+LH NL SL FHRCMLACSAELVL
Sbjct: 475 LMDDIWAQQRRLEAVKLYYRVLEAMCKAEAQILHVNNLNSLLTNERFHRCMLACSAELVL 534
Query: 133 ATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWE 192
ATHK++TMLF AVLER GITAF+LSKVI+SFIRHE+SLPRELRRHLNSLEERLLESMVWE
Sbjct: 535 ATHKSITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLEERLLESMVWE 594
Query: 193 KGSSMYNSLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLP 252
+GSSMYNSL VA+ L
Sbjct: 595 RGSSMYNSLIVAKAPLG------------------------------------------- 611
Query: 253 WWKEPFTEVDSIFLLI-PMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYA 311
E++ + LL PMPSLDAIA INFS G + S+ K E P
Sbjct: 612 ------LEINRLGLLAEPMPSLDAIAALINFSEGSSNHASSVQKAEACP----------- 654
Query: 312 NCYGEL-----VTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSN 361
G++ + DYRS+LVER++F S VK+ LL L N+KSK LPPPL PTR N
Sbjct: 655 GQNGDIKSPKRLCTDYRSILVERSSFASPVKERLLALGNVKSKTLPPPLQSAFATPTRPN 714
Query: 362 PGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSL 421
PGGGGE CAETGINI KINKLAAVRIN MVERLQLSQQ RESVYCL +R L QRTSL
Sbjct: 715 PGGGGETCAETGINIFLTKINKLAAVRINGMVERLQLSQQTRESVYCLF-QRVLAQRTSL 773
Query: 422 FFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----------- 470
FN HIDQIILCCFYGVAKISQ++LTF+EIIYNY KQPQCKP VFRSVF
Sbjct: 774 LFNRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVFVDSSQGRRQGR 833
Query: 471 ---DHVDIITFYNKIFAPTVKPLLVELGPV--GTAMKTNRDSEVN--HNNDASVFPALPD 523
DHVDIITFYN +F P VKPLLVE+ PV G A++ N + E + + SVFP++PD
Sbjct: 834 VGPDHVDIITFYNDVFIPAVKPLLVEIVPVKKGQAVEANNNPEGHCPGSPKVSVFPSVPD 893
Query: 524 MSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDI--NHRL 580
MSPKKVSA H+VYVSPLR S+MDALISHSSKSYYACVGESTHAY SP KDL+ I
Sbjct: 894 MSPKKVSAVHNVYVSPLRGSKMDALISHSSKSYYACVGESTHAYQSPSKDLSAINNRLNN 953
Query: 581 NSNRRVRGALNFDDVDVDVGLVSDSMVVNSLYL----------------QNGSAAAST 622
N++ + L F DV+ GLVSDSMV NSLY QNGS A+S+
Sbjct: 954 NNSSNRKRTLKF---DVEAGLVSDSMVGNSLYQQNQNQNQNETDASNQNQNGSDASSS 1008
>gi|75266674|sp|Q9SXN6.1|RBR1_TOBAC RecName: Full=Retinoblastoma-related protein 1; Short=NtRb1
gi|4586799|dbj|BAA76477.1| NtRb1 [Nicotiana tabacum]
Length = 961
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/679 (58%), Positives = 447/679 (65%), Gaps = 142/679 (20%)
Query: 10 VNITGAKRKFDSLASPVKTITSPLSPHHS---STSKM-VVTPVSTAMTTAKWLRTIICPL 65
VN+ G KRKFD++ASP KT+TS LSP+ S + SKM V TPVSTAMTTA+WLRT+I PL
Sbjct: 364 VNMNGVKRKFDAMASPAKTVTSTLSPYRSPNCANSKMTVATPVSTAMTTARWLRTVIAPL 423
Query: 66 PSKPSADL------------------------------------------QGANLMDNIW 83
KPSA+L Q +LMDNIW
Sbjct: 424 QPKPSAELERFLSSCDRDVTADVIRRAQIILEAIFPSSGPAEHCAAGGSLQSTSLMDNIW 483
Query: 84 AEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTV 138
AEQR EALKL Y+VL+TMCTAE+Q+L+ NLTSL FHRCMLACSAELVLATHKTV
Sbjct: 484 AEQRTSEALKLYYRVLQTMCTAESQILNGNNLTSLLTNERFHRCMLACSAELVLATHKTV 543
Query: 139 TMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY 198
TMLF AVLER GITAF+LSKVI+SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY
Sbjct: 544 TMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY 603
Query: 199 NSLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEPF 258
NSL VA+P+L+AEIN T +L +
Sbjct: 604 NSLAVAKPSLAAEINR--TGLLAE------------------------------------ 625
Query: 259 TEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELV 318
PMPSLDAIAMHIN SSG L P+ SLHK+ +P I + + + V
Sbjct: 626 ----------PMPSLDAIAMHINLSSGSLPPLPSLHKNNLAPNGQIGDIR-----SPKKV 670
Query: 319 TDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGGGGEPCAETG 373
+YRSVLVERN+FTS VKD L LNN+KSK PP L PTR NPGGGGE CAET
Sbjct: 671 CSEYRSVLVERNSFTSPVKDRFLALNNIKSKFPPPALQSAFASPTRPNPGGGGETCAETA 730
Query: 374 INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILC 433
IN+ F KI KLAAVRIN M+ERLQLSQQIRE+VYCL ++ L+QRTSLFFN HIDQIILC
Sbjct: 731 INVFFGKIVKLAAVRINGMIERLQLSQQIRETVYCLF-QKILSQRTSLFFNRHIDQIILC 789
Query: 434 CFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVFDHVDIITFYNKIFAPTVKPLLVE 493
FYGVAK R+ DHVDIITFYN++F P+VKPLLVE
Sbjct: 790 SFYGVAK--------------------------RTGADHVDIITFYNEMFIPSVKPLLVE 823
Query: 494 LGPVGTAMKTNR-DSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHS 552
L P G A K N D + + S FP LPDMSPKKVSA H+VYVSPLR S+MDALISHS
Sbjct: 824 LAPAGNAEKNNHNDGQGPASPKPSPFPKLPDMSPKKVSAVHNVYVSPLRASKMDALISHS 883
Query: 553 SKSYYACVGESTHAY-SPFKDLTDINHRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNSL 611
SKSYYACVGESTHAY SP KDL IN+RLN NR++RGALNF DVD GLVSDS+V NSL
Sbjct: 884 SKSYYACVGESTHAYQSPSKDLDVINNRLNGNRKLRGALNF---DVDAGLVSDSIVANSL 940
Query: 612 YLQNGSAAASTCAVLKPEQ 630
YLQNG+ S A +K EQ
Sbjct: 941 YLQNGN-CRSPVAHVKTEQ 958
>gi|387166330|gb|AFJ64577.1| retinoblastoma-related protein 1a [Brassica rapa]
Length = 992
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/663 (59%), Positives = 431/663 (65%), Gaps = 139/663 (20%)
Query: 1 SSGSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHSSTSK---------MVVTPVSTA 51
SGSL GAVN+TG KRK DSL+SP +T SPLSPH S +K + TPVSTA
Sbjct: 355 GSGSLSAGAVNVTGVKRKIDSLSSPARTFISPLSPHKSPAAKTNTISGAIKLTATPVSTA 414
Query: 52 MTTAKWLRTIICPLPSKPS----------------------------------------- 70
MTTAKWLRT+ICPL KPS
Sbjct: 415 MTTAKWLRTVICPLLPKPSPGLEHFLKSCDRDITTDVTRRAHVILEAIFPNSSLGDRCAG 474
Query: 71 ADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
LQ NLMD+IWAEQRRLEA+KL Y+VLE MC AEAQ+LHA NL SL FHRCMLA
Sbjct: 475 GSLQPVNLMDDIWAEQRRLEAVKLYYRVLEAMCIAEAQILHANNLNSLLTNERFHRCMLA 534
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
CSAELVLATHK++TMLF AVLER GITAF+L KVI+SFIRHE+SLPRELRRHLNSLEERL
Sbjct: 535 CSAELVLATHKSITMLFPAVLERTGITAFDLCKVIESFIRHEDSLPRELRRHLNSLEERL 594
Query: 186 LESMVWEKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPT 244
LESMVWEKGSSMYNSL VARP L+ EIN LG
Sbjct: 595 LESMVWEKGSSMYNSLIVARPLLALEINRLGL---------------------------- 626
Query: 245 RQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSI 304
L PMPSLDAIA INFS G + S+ KHET P +
Sbjct: 627 ---------------------LAEPMPSLDAIAALINFSEGS-NHAPSIQKHETCPGQNG 664
Query: 305 FNFQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTR 359
C DYRS+LVERN+FTS VKD LL N+KSK LPPPL PTR
Sbjct: 665 DMKSPKRQC------TDYRSILVERNSFTSPVKDRLLAFGNVKSKMLPPPLQSAFASPTR 718
Query: 360 SNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRT 419
NPGGGGE CAETGINI F KINKLAAVRIN MVERLQLSQQIRESVY L + L QRT
Sbjct: 719 PNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYRLF-QHVLAQRT 777
Query: 420 SLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------- 470
SL FN HIDQIILCCFYGVAKISQ++LTF+EIIYNY KQPQCKP VFRSV+
Sbjct: 778 SLLFNRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVDSHQSRRQ 837
Query: 471 -------DHVDIITFYNKIFAPTVKPLLVELGPV--GTAMKTNRDSEVN--HNNDASVFP 519
DHVDIITFYN+IF P VKPLLVE+ PV AM+ N E + + SVFP
Sbjct: 838 GQGRVGPDHVDIITFYNEIFIPAVKPLLVEIIPVKKDQAMEANNKPEGHCPGSPKVSVFP 897
Query: 520 ALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINH 578
++PDMSPKKVSA H+VYVSPLR S+MDALISHSSKSYYACVGESTHAY SP KDL+ IN+
Sbjct: 898 SVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSSKSYYACVGESTHAYQSPSKDLSAINN 957
Query: 579 RLN 581
RLN
Sbjct: 958 RLN 960
>gi|387166328|gb|AFJ64576.1| retinoblastoma-related protein 4 [Brassica juncea]
Length = 1017
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/696 (57%), Positives = 448/696 (64%), Gaps = 146/696 (20%)
Query: 1 SSGSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHSSTSKMVVT--PVSTAMTTAKWL 58
SGSL GAVN+TGAKRK DSL+SP +T SPLSPH S +K VT PVSTAMTTAKWL
Sbjct: 355 GSGSLSAGAVNLTGAKRKIDSLSSPARTFISPLSPHKSPAAKSTVTATPVSTAMTTAKWL 414
Query: 59 RTIICPLPSKPS-----------------------------------------ADLQGAN 77
RT+ CPLP KPS LQ N
Sbjct: 415 RTVTCPLPPKPSPGLELFLKSCDRDITNDVTRRAHVILEAIFPNSSLGDQCAGGSLQPVN 474
Query: 78 LMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVL 132
LMD+IWA+QRRLEA+KL Y+VLE MC AEAQ+LH NL SL FHRCMLACSAELVL
Sbjct: 475 LMDDIWAQQRRLEAVKLYYRVLEAMCKAEAQILHVNNLNSLLTNERFHRCMLACSAELVL 534
Query: 133 ATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWE 192
ATHK++TMLF AVL+R GITAF+LSKVI+SFIRHE+SLPRELRRHLNSLEERLLESMVWE
Sbjct: 535 ATHKSITMLFPAVLDRTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLEERLLESMVWE 594
Query: 193 KGSSMYNSLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLP 252
+GSSM Y +L
Sbjct: 595 RGSSM--------------------------------------------------YNSLI 604
Query: 253 WWKEPFT-EVDSIFLLI-PMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFY 310
K P E++ + LL PMPSLDAIA INFS G + S+ K E P
Sbjct: 605 VAKAPLALEINRLGLLAEPMPSLDAIAALINFSEGSSNHASSVQKAEACP---------- 654
Query: 311 ANCYGEL-----VTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRS 360
G++ + DYRS+LVER++F S VK+ LL L N+KSK LPPPL PTR
Sbjct: 655 -GQNGDIKSPKRLCTDYRSILVERSSFASPVKERLLALGNVKSKTLPPPLQSAFATPTRP 713
Query: 361 NPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTS 420
NPGGGGE CAETGINI F KINKLAAVRIN MVERLQLSQQIRESVYCL +R L QRTS
Sbjct: 714 NPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYCLF-QRVLAQRTS 772
Query: 421 LFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---------- 470
L FN HIDQIILCCFYGVAKISQ++LTF+EIIYNY KQPQCKP VFRSVF
Sbjct: 773 LLFNRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVFVDSSQGRRQG 832
Query: 471 ----DHVDIITFYNKIFAPTVKPLLVELGPV--GTAMKTNRDSEVN--HNNDASVFPALP 522
DHVDIITFYN +F P VKPLLVE+ PV G A++ N + E + + SVFP++P
Sbjct: 833 RVGPDHVDIITFYNDVFIPAVKPLLVEIVPVKKGQAVEANNNPEGHCPGSPKVSVFPSVP 892
Query: 523 DMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDI--NHR 579
DMSPKKVSA H+VYVSPLR S+MDALISHSSKSYYACVGESTHAY SP KDL+ I
Sbjct: 893 DMSPKKVSAVHNVYVSPLRGSKMDALISHSSKSYYACVGESTHAYQSPSKDLSAINNRLN 952
Query: 580 LNSNRRVRGALNFDDVDVDVGLVSDSMVVNSLYLQN 615
N++ + L F DV+ GLVSDSMV NSL LQN
Sbjct: 953 NNNSSNRKRTLKF---DVEAGLVSDSMVGNSLSLQN 985
>gi|75244686|sp|Q8H252.1|RBR_COCNU RecName: Full=Retinoblastoma-related protein
gi|23429044|gb|AAM77469.1| retinoblastoma-like protein [Cocos nucifera]
Length = 1011
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/706 (56%), Positives = 457/706 (64%), Gaps = 156/706 (22%)
Query: 16 KRKFDSLASPVKTITSPLSPHHSSTS--------KMV-VTPVSTAMTTAKWLRTIICPLP 66
KRK+D++ASP K+ITSPLSP S S KMV +TPVSTAMTTAKWLR II PLP
Sbjct: 372 KRKYDAMASPAKSITSPLSPPLSPASPVNGNPVIKMVPITPVSTAMTTAKWLRNIISPLP 431
Query: 67 SKPS-----------------------------------------ADLQGANLMDNIWAE 85
S+PS +LQ N MD+IWAE
Sbjct: 432 SRPSTELLCFFSSCDRDITTDVTRRASIILGAIFPTTSFGDCCISGNLQSVNQMDSIWAE 491
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTM 140
QR++EA+KL Y+VLETMC AE+ +L+ NLTSL FHRCMLACSAELVLATHKTVTM
Sbjct: 492 QRKVEAMKLYYRVLETMCRAESHILNGNNLTSLLSNDRFHRCMLACSAELVLATHKTVTM 551
Query: 141 LFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNS 200
+F AVLE+ GITAF+LSKVI+SF+RHEE+LPREL+RHLNSLEERLLESM WE+GSSMYNS
Sbjct: 552 MFPAVLEKTGITAFDLSKVIESFVRHEETLPRELKRHLNSLEERLLESMAWERGSSMYNS 611
Query: 201 LTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEPFT 259
L VARP L+AEIN LG
Sbjct: 612 LIVARPTLAAEINRLGL------------------------------------------- 628
Query: 260 EVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELVT 319
L PMPSLDAIA+H N S+GGL P+ KHE S + Q +
Sbjct: 629 ------LAEPMPSLDAIAVHNNISTGGLPPL-PFQKHEHS------SDQNGGAVSPKRAC 675
Query: 320 DDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGGGGEPCAETGI 374
+YRSVLVERN+FTS VK+ L LN LKSK PPL PTR NP GGGE CAETGI
Sbjct: 676 SEYRSVLVERNSFTSPVKELTLTLN-LKSKL--PPLQSAFASPTRPNPAGGGETCAETGI 732
Query: 375 NICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCC 434
NI F KI KLAA+RI ++ ERLQL QQI E VYCL ++ L+QRT+LFFN HIDQIILC
Sbjct: 733 NIFFNKIVKLAAIRIRSLCERLQLPQQILEWVYCLI-QQILSQRTALFFNRHIDQIILCS 791
Query: 435 FYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DHVDIITFYN 480
FYGVAKISQ+ LTFKEIIYNY KQPQCKPQVFRSVF +HVDIITFYN
Sbjct: 792 FYGVAKISQMALTFKEIIYNYRKQPQCKPQVFRSVFVHWPSTSHNGKTGQEHVDIITFYN 851
Query: 481 KIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASV--------FPALPDMSPKKVSAT 532
++F P+VKPLLVELGP G A K+ E ++N D+ + FP LPDMSPKKVSA
Sbjct: 852 EVFIPSVKPLLVELGPAGVAQKSKSSPEDSNNADSQIPGSPRLSPFPNLPDMSPKKVSAA 911
Query: 533 HSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNRRVRGALN 591
H+VYVSPLR+S+MDAL+S SSKSYYACVGESTHAY SP KDLT IN+RLNS R+V G LN
Sbjct: 912 HNVYVSPLRSSKMDALLSPSSKSYYACVGESTHAYQSPSKDLTAINNRLNSGRKVSGRLN 971
Query: 592 FDDVDVDVGLVSDSMVVNSLYLQNGSAA-ASTCAVL----KPEQLD 632
FD +VSDS+V SL QNGS+A A C++L K EQ D
Sbjct: 972 FD-------VVSDSVVAGSLGAQNGSSAPAPACSILELPVKREQPD 1010
>gi|75220294|sp|O82677.1|RBR_CHERU RecName: Full=Retinoblastoma-related protein
gi|3702121|emb|CAA09736.1| retinoblastoma-related protein [Chenopodium rubrum]
Length = 1012
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/725 (55%), Positives = 457/725 (63%), Gaps = 170/725 (23%)
Query: 9 AVNITGAKR-KFDSLASPVKTITSPLSPHHSST-----------SKMVVTPVSTAMTTAK 56
A+NI+G + + + L + +TI SPLSP S +M+ TPVSTAMTTAK
Sbjct: 356 AINISGLREIRCNGLFN--ETIASPLSPCRSPALHVNGARGGVNIRMISTPVSTAMTTAK 413
Query: 57 WLRTIICPLPSKPSADLQ-----------------------------------------G 75
WLRT I PLPSKPS L+
Sbjct: 414 WLRTYISPLPSKPSPQLEKYLMSCDRNISSEVVRRAHIIMEAIFPNSALGERCIAGSLPN 473
Query: 76 ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAEL 130
+NL DNIWA+QRRLEALKL Y+VLETMCTAEAQ+LHA NLTSL FHRCMLACSAEL
Sbjct: 474 SNLTDNIWAQQRRLEALKLYYRVLETMCTAEAQLLHANNLTSLLTNERFHRCMLACSAEL 533
Query: 131 VLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMV 190
VLATHKTVTMLF AVLE+ GITAF+LSKVI+SFIRHE+SLPRELRRHLNSLEERLLESM
Sbjct: 534 VLATHKTVTMLFPAVLEKTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLEERLLESMA 593
Query: 191 WEKGSSMYNSLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYEN 250
WEKGSSM NSL +ARPALSA IN F
Sbjct: 594 WEKGSSMDNSLIIARPALSAGIN----------------RFG------------------ 619
Query: 251 LPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFY 310
L PMP L+A+A HI S+GGL P+ S KHE F
Sbjct: 620 --------------LLAEPMPFLNAMAAHIEVSTGGLPPLPSSCKHE-----------FA 654
Query: 311 ANCYGELVT-----DDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRS 360
A G++ + +YRSVLVERN+FTS VKD L+ NNLK K PP L PTR
Sbjct: 655 AGQNGDIRSPKRACTEYRSVLVERNSFTSPVKDRLI--NNLKQKLTPPALQSAFASPTRL 712
Query: 361 NPGGGGEPCAETGINICFCKINKLAAVRINAMVERL----------QLSQQIRESVYCLC 410
+PGGGGE CAETGINI F KI KLAAVRIN M+ERL QL +Q+RE+VYC
Sbjct: 713 SPGGGGETCAETGINIFFSKIVKLAAVRINGMIERLEKLEKQSQTQQLREQLRENVYCRF 772
Query: 411 PKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
LNQRTSLFFN HIDQIILC FYGVAKISQ LTFKEII NY KQPQCKPQVFRSVF
Sbjct: 773 -HIILNQRTSLFFNRHIDQIILCAFYGVAKISQYELTFKEIILNYRKQPQCKPQVFRSVF 831
Query: 471 -------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA-- 515
DHVDIITFYN++F P+VKPLL ELGP G +KT+ E N++ D
Sbjct: 832 VDWSFSRRNRQGQDHVDIITFYNEVFIPSVKPLLGELGPQGACVKTDLIPESNNDKDGQC 891
Query: 516 ------SVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-S 568
S FP+LPDMSPKKV+ +VYVSPLR+S+MDALIS+SSKSYYACVGESTHA+ S
Sbjct: 892 PGSPKLSTFPSLPDMSPKKVA--KNVYVSPLRSSKMDALISNSSKSYYACVGESTHAFQS 949
Query: 569 PFKDLTDINHRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGS-AAASTCAVLK 627
P KDLT IN RLNS +VRGALNF D D GLVSDS+V NSLYLQNG+ A S+ LK
Sbjct: 950 PSKDLTAINDRLNSTSKVRGALNF---DTDAGLVSDSLVANSLYLQNGNCATTSSVGPLK 1006
Query: 628 PEQLD 632
EQ D
Sbjct: 1007 TEQPD 1011
>gi|254789784|sp|A9UL13.1|RBR1_WHEAT RecName: Full=Retinoblastoma-related protein 1; Short=TaRBR1
gi|62956047|gb|AAY23366.1| retinoblastoma-related protein 1 [Triticum aestivum]
Length = 957
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 370/715 (51%), Positives = 435/715 (60%), Gaps = 170/715 (23%)
Query: 11 NITGAKRKFDS-LASPVKTITS--PLSP---------HHSSTSKMV-VTPVSTAMTTAKW 57
+ G KRK+D +ASP K+ S P+SP + SKM TPVSTAMTTAKW
Sbjct: 321 KLPGTKRKYDDVMASPTKSTASRAPMSPPRFCPSPNGNSFCNSKMAPFTPVSTAMTTAKW 380
Query: 58 LRTIICPLPSKPSADL----------------------------------------QGAN 77
LR+ I PLPSKPS +L + +
Sbjct: 381 LRSTISPLPSKPSGELLRFFSACDKDVTDDITCRAAIILGAIFTGSSFGERMCTSLRNTS 440
Query: 78 LMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVL 132
MD IW EQR++EALKL Y+VLE+MC AE+Q+L NLTSL FHRCM+ACSAELVL
Sbjct: 441 GMDAIWTEQRKMEALKLYYRVLESMCRAESQILSGSNLTSLLSNERFHRCMIACSAELVL 500
Query: 133 ATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWE 192
ATHKTVTM+F AVLE+ GITAF+LSKVI+SF+RHE+SLPREL+RHLNSLEERLLESM WE
Sbjct: 501 ATHKTVTMMFPAVLEKTGITAFDLSKVIESFVRHEDSLPRELKRHLNSLEERLLESMAWE 560
Query: 193 KGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENL 251
KGSSMYNSL VARP LSAEIN LG
Sbjct: 561 KGSSMYNSLIVARPTLSAEINRLGL----------------------------------- 585
Query: 252 PWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYA 311
L PMPSLDAIA+H + S GGL P+ + + V S
Sbjct: 586 --------------LAEPMPSLDAIAVHHDISLGGLPPLPFHKQPDKDEVRS-------- 623
Query: 312 NCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPP----LYPTRSNPGGGGE 367
+ + R+VLV+ N+F S VKD + KSK LPP PTR NP GGE
Sbjct: 624 ---PKRACTERRNVLVD-NSFRSPVKDAI------KSKFLPPLQSAFASPTRPNPAAGGE 673
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
CAETGI + KI KLAA+RI + ERLQLSQQI E VY L ++ ++Q+T+LFFN HI
Sbjct: 674 TCAETGIGVFLSKITKLAAIRIKCLCERLQLSQQILERVYSLV-QQIISQQTALFFNRHI 732
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DHV 473
DQIILCC YGVAKISQL LTFKEII++Y KQ QCKPQVFRSV+ DHV
Sbjct: 733 DQIILCCIYGVAKISQLALTFKEIIFSYRKQSQCKPQVFRSVYVNWPSRSRSGKIGEDHV 792
Query: 474 DIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA---------SVFPALPDM 524
DIITFYN++F PTVKPLLV+LGP GT+ NR++E DA S FP LPDM
Sbjct: 793 DIITFYNEVFIPTVKPLLVDLGP-GTS--PNRNNEPKSGGDAASFPESPRLSRFPNLPDM 849
Query: 525 SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSN 583
SPKKVSATH+VYVSPLR+S+MD L+S SSKSYYACVGESTHA+ SP KDL IN RLNS
Sbjct: 850 SPKKVSATHNVYVSPLRSSKMDTLLSPSSKSYYACVGESTHAFQSPSKDLNAINTRLNSG 909
Query: 584 RRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAAS-----TCAVLKPEQLDP 633
++V G LNFD +VSD +V SL QNGS+AA+ T +K EQ DP
Sbjct: 910 KKVNGRLNFD-------VVSDLVVARSLSDQNGSSAAAMAVFGTKTPVKGEQQDP 957
>gi|242079805|ref|XP_002444671.1| hypothetical protein SORBIDRAFT_07g025760 [Sorghum bicolor]
gi|241941021|gb|EES14166.1| hypothetical protein SORBIDRAFT_07g025760 [Sorghum bicolor]
Length = 1012
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 365/719 (50%), Positives = 438/719 (60%), Gaps = 171/719 (23%)
Query: 9 AVNITGAKRKFDSLASPVKTITSP---------LSPHHSS--TSKMV-VTPVSTAMTTAK 56
A+N+ G KRK+D +ASP K+I+SP LSP S+ SKM +TPVSTAMTTAK
Sbjct: 368 AINLPGTKRKYDVMASPAKSISSPNPMSPPRFCLSPKGSNFCNSKMAPITPVSTAMTTAK 427
Query: 57 WLRTIICPLPSKPSADL----------------------------------------QGA 76
WLR+ + PLPSKPS +L + A
Sbjct: 428 WLRSTVSPLPSKPSGELLRFFSACDKDLTDDIAHRAGIILGAIFTSSSFGERICTNMRSA 487
Query: 77 NLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELV 131
N MD IW EQR++EALKL Y+VLE+MC AE+Q+L NLTSL FHRCM+ACSAELV
Sbjct: 488 NRMDAIWTEQRKMEALKLYYRVLESMCRAESQILSGNNLTSLLSNERFHRCMIACSAELV 547
Query: 132 LATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
LATHKTVTM+F AVLE+ GITAF+LSKVI+ F+RHE++LPREL+RHLNSLEERLLESM W
Sbjct: 548 LATHKTVTMMFPAVLEKTGITAFDLSKVIEGFVRHEDTLPRELKRHLNSLEERLLESMAW 607
Query: 192 EKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYEN 250
EKGSSMYNSL VARPALS EIN LG
Sbjct: 608 EKGSSMYNSLIVARPALSVEINRLGL---------------------------------- 633
Query: 251 LPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFY 310
L PMPSLDAIA H N S GGL P+ F Q
Sbjct: 634 ---------------LAEPMPSLDAIAAHHNISLGGLPPLP-------------FQKQDR 665
Query: 311 ANCYGELVT-----DDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRS 360
E+ + + R+VLV+ N+F S VKD + KSK LPPPL PTR
Sbjct: 666 LQDKDEVRSPKRACTERRNVLVDSNSFRSPVKDII------KSK-LPPPLQSAFASPTRP 718
Query: 361 NPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTS 420
NP GGE CAETGI + F KI KLAA+RI ++ ERLQLSQQ+ E VY L ++ L+Q+T
Sbjct: 719 NPAAGGETCAETGIGVFFSKIAKLAAIRIRSLCERLQLSQQVLERVYSLV-QQILSQQTG 777
Query: 421 LFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---------- 470
LFFN HIDQIILC YGVAKISQL L+FKEII+ Y KQPQCKPQVFRSV+
Sbjct: 778 LFFNRHIDQIILCSIYGVAKISQLELSFKEIIFGYRKQPQCKPQVFRSVYVHWPPRSRNG 837
Query: 471 ----DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRD---SEVNHNNDA---SVFPA 520
DHVDIITFYN++F P VKPLLVE+GP + K + ++V ++ + FP
Sbjct: 838 KTGEDHVDIITFYNEVFIPAVKPLLVEVGPGASPKKKEEEKGSADVGPYPESPRLARFPN 897
Query: 521 LPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHR 579
LPDMSPKKVSATH+VYVSPLR+S+MD L+S SSKSYYACVGEST+A+ SP KDL IN+R
Sbjct: 898 LPDMSPKKVSATHNVYVSPLRSSKMDTLLSPSSKSYYACVGESTYAFQSPSKDLKAINNR 957
Query: 580 LN---SNRRVRGALNFDDVDVDVGLVSDSMVVNSLYL-QNGSAAASTCAVLK-PEQLDP 633
LN S ++V G LNFD +VSD +V +SL QN AA+ +K P + +P
Sbjct: 958 LNSVSSGKKVNGRLNFD-------VVSDLVVASSLSSDQNAKPAATEVVPIKTPVKCEP 1009
>gi|75243176|sp|Q84QM3.1|RBR1_ORYSJ RecName: Full=Retinoblastoma-related protein 1; Short=OsRBR1
gi|30060387|dbj|BAC75848.1| putative Retinoblastoma protein [Oryza sativa Japonica Group]
gi|215768647|dbj|BAH00876.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768840|dbj|BAH01069.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1010
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 362/689 (52%), Positives = 418/689 (60%), Gaps = 154/689 (22%)
Query: 9 AVNITGAKRKFDSLASPVKTITSP--LSP---------HHSSTSKMV-VTPVSTAMTTAK 56
A+N+ G KRK+D +ASP K+ITSP +SP + +SKM +TPVSTAMTTAK
Sbjct: 370 AINLPGTKRKYDVMASPAKSITSPSPMSPPRFCASPTGNGYCSSKMAPITPVSTAMTTAK 429
Query: 57 WLRTIICPLPSKPSADL----------------------------------------QGA 76
WLR+ I PLPSKPS +L +
Sbjct: 430 WLRSTISPLPSKPSGELLRFFSACDKDVTDDITRRAGIILGAIFTSSSFGERICTSVRST 489
Query: 77 NLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELV 131
N +D IW EQR++EALKL Y+VLE+MC AE Q+L NLTSL FHRCM+ACSAELV
Sbjct: 490 NRIDAIWTEQRKMEALKLYYRVLESMCRAETQILSGNNLTSLLSNERFHRCMIACSAELV 549
Query: 132 LATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
LATHKTVTM+F AVLE+ GITAF+LSKVI+SF+RHE++LPREL+RHLNSLEERLLESM W
Sbjct: 550 LATHKTVTMMFPAVLEKTGITAFDLSKVIESFVRHEDTLPRELKRHLNSLEERLLESMAW 609
Query: 192 EKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYEN 250
EKGSSMYNSL VARP LSAEIN LG
Sbjct: 610 EKGSSMYNSLIVARPTLSAEINRLGL---------------------------------- 635
Query: 251 LPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFY 310
L PMPSLDAIA H N S GL P+ K E SP
Sbjct: 636 ---------------LAEPMPSLDAIAAHHNISLEGLPPL-PFQKQEHSPDKDEVRSPKR 679
Query: 311 ANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPP----LYPTRSNPGGGG 366
A + R+VLV+ N+F S VKD LKSK LPP L PTR NP GG
Sbjct: 680 A-------CTERRNVLVDNNSFRSPVKD------TLKSK-LPPLQSAFLSPTRPNPAAGG 725
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
E CAETGI + KI KLAA+RI + ERLQLSQQ+ E VY L ++ + Q+T+LFFN H
Sbjct: 726 ELCAETGIGVFLSKIAKLAAIRIRGLCERLQLSQQVLERVYSLV-QQIIIQQTALFFNRH 784
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DH 472
IDQIILC YGVAKISQL LTFKEII+ Y KQ QCKPQVFRSV+ DH
Sbjct: 785 IDQIILCSIYGVAKISQLALTFKEIIFGYRKQSQCKPQVFRSVYVHWASRSRNGKTGEDH 844
Query: 473 VDIITFYNKIFAPTVKPLLVELGPVGTAMKTNR-----DSEVNHNNDASVFPALPDMSPK 527
VDIITFYN++F PTVKPLLVELG + K N D + S FP LPDMSPK
Sbjct: 845 VDIITFYNEVFIPTVKPLLVELGSGTSPNKKNEEKCAADGPYPESPRLSRFPNLPDMSPK 904
Query: 528 KVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNRRV 586
KVSA H+VYVSPLRTS+MD L+S SSKSYYACVGESTHA+ SP KDL IN+RLNS ++V
Sbjct: 905 KVSAAHNVYVSPLRTSKMDTLLSPSSKSYYACVGESTHAFQSPSKDLKVINNRLNSGKKV 964
Query: 587 RGALNFDDVDVDVGLVSDSMVVNSLYLQN 615
G LNFD +VSD +V SL QN
Sbjct: 965 SGRLNFD-------VVSDLVVARSLSDQN 986
>gi|189039574|sp|A2YXJ7.1|RBR1_ORYSI RecName: Full=Retinoblastoma-related protein 1; Short=OsRBR1
gi|125562360|gb|EAZ07808.1| hypothetical protein OsI_30066 [Oryza sativa Indica Group]
Length = 1010
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 362/689 (52%), Positives = 418/689 (60%), Gaps = 154/689 (22%)
Query: 9 AVNITGAKRKFDSLASPVKTITSP--LSP---------HHSSTSKMV-VTPVSTAMTTAK 56
A+N+ G KRK+D +ASP K+ITSP +SP + +SKM +TPVSTAMTTAK
Sbjct: 370 AINLPGTKRKYDVMASPAKSITSPSPMSPPRFCASPTGNGYCSSKMAPITPVSTAMTTAK 429
Query: 57 WLRTIICPLPSKPSADL----------------------------------------QGA 76
WLR+ I PLPSKPS +L +
Sbjct: 430 WLRSTISPLPSKPSGELLRFFSACDKDVTDDITRRAGIILGAIFTSSSFGERICTSVRST 489
Query: 77 NLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELV 131
N +D IW EQR++EALKL Y+VLE+MC AE Q+L NLTSL FHRCM+ACSAELV
Sbjct: 490 NRIDAIWTEQRKMEALKLYYRVLESMCRAETQILSGNNLTSLLSNERFHRCMIACSAELV 549
Query: 132 LATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
LATHKTVTM+F AVLE+ GITAF+LSKVI+SF+RHE++LPREL+RHLNSLEERLLESM W
Sbjct: 550 LATHKTVTMMFPAVLEKTGITAFDLSKVIESFVRHEDTLPRELKRHLNSLEERLLESMAW 609
Query: 192 EKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYEN 250
EKGSSMYNSL VARP LSAEIN LG
Sbjct: 610 EKGSSMYNSLIVARPTLSAEINRLGL---------------------------------- 635
Query: 251 LPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFY 310
L PMPSLDAIA H N S GL P+ K E SP
Sbjct: 636 ---------------LAEPMPSLDAIAAHHNISLEGLPPL-PFQKQEHSPDKDEVRSPKR 679
Query: 311 ANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPP----LYPTRSNPGGGG 366
A + R+VLV+ N+F S VKD LKSK LPP L PTR NP GG
Sbjct: 680 A-------CTERRNVLVDNNSFRSPVKD------TLKSK-LPPLQSAFLSPTRPNPAAGG 725
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
E CAETGI + KI KLAA+RI + ERLQLSQQ+ E VY L ++ + Q+T+LFFN H
Sbjct: 726 ELCAETGIGVFLSKIAKLAAIRIRGLCERLQLSQQVLERVYSLV-QQIIIQQTALFFNRH 784
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DH 472
IDQIILC YGVAKISQL LTFKEII+ Y KQ QCKPQVFRSV+ DH
Sbjct: 785 IDQIILCSIYGVAKISQLALTFKEIIFGYRKQSQCKPQVFRSVYVHWASRSRNGKTGEDH 844
Query: 473 VDIITFYNKIFAPTVKPLLVELGPVGTAMKTNR-----DSEVNHNNDASVFPALPDMSPK 527
VDIITFYN++F PTVKPLLVELG + K N D + S FP LPDMSPK
Sbjct: 845 VDIITFYNEVFIPTVKPLLVELGSGTSPNKKNEEKCAADGPYPESPRLSRFPNLPDMSPK 904
Query: 528 KVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNRRV 586
KVSA H+VYVSPLRTS+MD L+S SSKSYYACVGESTHA+ SP KDL IN+RLNS ++V
Sbjct: 905 KVSAAHNVYVSPLRTSKMDTLLSPSSKSYYACVGESTHAFQSPSKDLKVINNRLNSGKKV 964
Query: 587 RGALNFDDVDVDVGLVSDSMVVNSLYLQN 615
G LNFD +VSD +V SL QN
Sbjct: 965 SGRLNFD-------VVSDLVVARSLSDQN 986
>gi|357148663|ref|XP_003574849.1| PREDICTED: retinoblastoma-related protein 1-like [Brachypodium
distachyon]
Length = 1000
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 359/702 (51%), Positives = 422/702 (60%), Gaps = 154/702 (21%)
Query: 2 SGSLFGGAVNITGAKRKFDSLASPVKTITSP---------LSPHHSS--TSKMV--VTPV 48
SGSL GGA+ + G KRK+D LASP K+ SP SP+ +S SKM +TPV
Sbjct: 335 SGSLSGGAIKLPGTKRKYDVLASPSKSAISPSPMSPPRFCASPNGNSFGNSKMAPPLTPV 394
Query: 49 STAMTTAKWLRTIICPLPSKPSADL----------------------------------- 73
STAMTTAKWLR+ I PLPS+PS +L
Sbjct: 395 STAMTTAKWLRSTISPLPSRPSGELLRFFSACDKDVTDDITRRAAIILGAIFTGNSFGER 454
Query: 74 -----QGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCM 123
+ N D IW EQR++EALKL Y+VLE+MC AE+ VL NLTSL FHRCM
Sbjct: 455 MCTTVRSTNGFDAIWTEQRKMEALKLYYRVLESMCRAESHVLSGSNLTSLLSNERFHRCM 514
Query: 124 LACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEE 183
+ACSAELVLATHKTVTM+F AVLE+ GITAF+LSKVI+SF+RHE++LPREL+RHLNSLEE
Sbjct: 515 IACSAELVLATHKTVTMMFPAVLEKTGITAFDLSKVIESFVRHEDTLPRELKRHLNSLEE 574
Query: 184 RLLESMVWEKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDS 242
RLLES+ WEKGSSMYNSL VARP LS EIN LG
Sbjct: 575 RLLESLAWEKGSSMYNSLIVARPTLSVEINRLGL-------------------------- 608
Query: 243 PTRQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVC 302
L PMPSLDAI H + S GGL P+ K E SP
Sbjct: 609 -----------------------LAEPMPSLDAIVAHHDISLGGLPPL-PFQKQERSPDK 644
Query: 303 SIFNFQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPP----LYPT 358
A + R+VLV+ N+F S VKD +K K LPP PT
Sbjct: 645 DEVRSPKRA-------CTERRNVLVDSNSFRSPVKD------TIKLKILPPLQSAFASPT 691
Query: 359 RSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQR 418
R NP GGE CAETGI + KI KLAA+RI + ERLQL QQI E VY L ++ ++Q+
Sbjct: 692 RPNPAAGGETCAETGIGVFLSKIAKLAAIRIKGLCERLQLPQQILERVYSLV-QQIISQQ 750
Query: 419 TSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-------- 470
T+LFFN HIDQIILC YGVAKISQL+LTFKEII++Y KQPQCK QVFRSVF
Sbjct: 751 TALFFNRHIDQIILCSIYGVAKISQLSLTFKEIIFSYRKQPQCKLQVFRSVFVHRPSRSR 810
Query: 471 ------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVN-----HNNDASVFP 519
DHVDIITFYN++F PTVKPLLV+LG + K N + + + FP
Sbjct: 811 TGKTGEDHVDIITFYNEVFIPTVKPLLVDLGSGASPNKNNGEKNATDVPFPESPRLTRFP 870
Query: 520 ALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINH 578
LPDMSPKKVSATH+VYVSPLR+S+MD L+S SSKSYYACVGESTHA+ SP KDL IN
Sbjct: 871 TLPDMSPKKVSATHNVYVSPLRSSKMDTLLSPSSKSYYACVGESTHAFQSPSKDLKAINT 930
Query: 579 RLNSNRRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAA 620
RLNS ++V G LNFD +VSD V SL QNG++ +
Sbjct: 931 RLNSGKKVSGRLNFD-------VVSDLDVARSLSDQNGASTS 965
>gi|125571489|gb|EAZ13004.1| hypothetical protein OsJ_02923 [Oryza sativa Japonica Group]
Length = 981
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 362/689 (52%), Positives = 418/689 (60%), Gaps = 154/689 (22%)
Query: 9 AVNITGAKRKFDSLASPVKTITSP--LSP---------HHSSTSKMV-VTPVSTAMTTAK 56
A+N+ G KRK+D +ASP K+ITSP +SP + +SKM +TPVSTAMTTAK
Sbjct: 341 AINLPGTKRKYDVMASPAKSITSPSPMSPPRFCASPTGNGYCSSKMAPITPVSTAMTTAK 400
Query: 57 WLRTIICPLPSKPSADL----------------------------------------QGA 76
WLR+ I PLPSKPS +L +
Sbjct: 401 WLRSTISPLPSKPSGELLRFFSACDKDVTDDITRRAGIILGAIFTSSSFGERICTSVRST 460
Query: 77 NLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELV 131
N +D IW EQR++EALKL Y+VLE+MC AE Q+L NLTSL FHRCM+ACSAELV
Sbjct: 461 NRIDAIWTEQRKMEALKLYYRVLESMCRAETQILSGNNLTSLLSNERFHRCMIACSAELV 520
Query: 132 LATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
LATHKTVTM+F AVLE+ GITAF+LSKVI+SF+RHE++LPREL+RHLNSLEERLLESM W
Sbjct: 521 LATHKTVTMMFPAVLEKTGITAFDLSKVIESFVRHEDTLPRELKRHLNSLEERLLESMAW 580
Query: 192 EKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYEN 250
EKGSSMYNSL VARP LSAEIN LG
Sbjct: 581 EKGSSMYNSLIVARPTLSAEINRLGL---------------------------------- 606
Query: 251 LPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFY 310
L PMPSLDAIA H N S GL P+ K E SP
Sbjct: 607 ---------------LAEPMPSLDAIAAHHNISLEGLPPL-PFQKQEHSPDKDEVRSPKR 650
Query: 311 ANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPP----LYPTRSNPGGGG 366
A + R+VLV+ N+F S VKD LKSK LPP L PTR NP GG
Sbjct: 651 A-------CTERRNVLVDNNSFRSPVKD------TLKSK-LPPLQSAFLSPTRPNPAAGG 696
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
E CAETGI + KI KLAA+RI + ERLQLSQQ+ E VY L ++ + Q+T+LFFN H
Sbjct: 697 ELCAETGIGVFLSKIAKLAAIRIRGLCERLQLSQQVLERVYSLV-QQIIIQQTALFFNRH 755
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DH 472
IDQIILC YGVAKISQL LTFKEII+ Y KQ QCKPQVFRSV+ DH
Sbjct: 756 IDQIILCSIYGVAKISQLALTFKEIIFGYRKQSQCKPQVFRSVYVHWASRSRNGKTGEDH 815
Query: 473 VDIITFYNKIFAPTVKPLLVELGPVGTAMKTNR-----DSEVNHNNDASVFPALPDMSPK 527
VDIITFYN++F PTVKPLLVELG + K N D + S FP LPDMSPK
Sbjct: 816 VDIITFYNEVFIPTVKPLLVELGSGTSPNKKNEEKCAADGPYPESPRLSRFPNLPDMSPK 875
Query: 528 KVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNRRV 586
KVSA H+VYVSPLRTS+MD L+S SSKSYYACVGESTHA+ SP KDL IN+RLNS ++V
Sbjct: 876 KVSAAHNVYVSPLRTSKMDTLLSPSSKSYYACVGESTHAFQSPSKDLKVINNRLNSGKKV 935
Query: 587 RGALNFDDVDVDVGLVSDSMVVNSLYLQN 615
G LNFD +VSD +V SL QN
Sbjct: 936 SGRLNFD-------VVSDLVVARSLSDQN 957
>gi|62956051|gb|AAY23368.1| retinoblastoma-related protein 1 [Oryza sativa Japonica Group]
Length = 1010
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 361/689 (52%), Positives = 417/689 (60%), Gaps = 154/689 (22%)
Query: 9 AVNITGAKRKFDSLASPVKTITSP--LSP---------HHSSTSKMV-VTPVSTAMTTAK 56
A+N+ G KRK+D +ASP K+ITSP +SP + +SKM +TPVSTAMTTAK
Sbjct: 370 AINLPGTKRKYDVMASPAKSITSPSPMSPPRFCASPTGNGYCSSKMAPITPVSTAMTTAK 429
Query: 57 WLRTIICPLPSKPSADL----------------------------------------QGA 76
WLR+ I PLPSKPS +L +
Sbjct: 430 WLRSTISPLPSKPSGELLRFFSACDKDVTDDITRRAGIILGAIFTSSSFGERICTSVRST 489
Query: 77 NLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELV 131
N +D IW EQR++EALKL Y+VLE+MC AE Q+L NLTSL FHRCM+ACSAELV
Sbjct: 490 NRIDAIWTEQRKMEALKLYYRVLESMCRAETQILSGNNLTSLLSNERFHRCMIACSAELV 549
Query: 132 LATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
LATHKTVTM+F AVLE+ GITAF+LSKVI+SF+RHE++LPREL+RHLNSLEERLLESM W
Sbjct: 550 LATHKTVTMMFPAVLEKTGITAFDLSKVIESFVRHEDTLPRELKRHLNSLEERLLESMAW 609
Query: 192 EKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYEN 250
EKGSSMYNSL VARP LSAEIN LG
Sbjct: 610 EKGSSMYNSLIVARPTLSAEINRLGL---------------------------------- 635
Query: 251 LPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFY 310
L PMPSLDAIA H N S GL P+ K E SP
Sbjct: 636 ---------------LAEPMPSLDAIAAHHNISLEGLPPL-PFQKQEHSPDKDEVRSPKR 679
Query: 311 ANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPP----LYPTRSNPGGGG 366
A + R+VLV+ N+F S VKD LKSK LPP L PTR NP GG
Sbjct: 680 A-------CTERRNVLVDNNSFRSPVKD------TLKSK-LPPLQSAFLSPTRPNPAAGG 725
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
E CAETGI + KI KLAA+RI + ERLQLSQQ+ E VY L ++ + Q+T+LFFN H
Sbjct: 726 ELCAETGIGVFLSKIAKLAAIRIRGLCERLQLSQQVLERVYSLV-QQIIIQQTALFFNRH 784
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DH 472
IDQIILC YGVAKISQL LTFKEII+ Y KQ QCKPQVFRSV+ DH
Sbjct: 785 IDQIILCSIYGVAKISQLALTFKEIIFGYRKQSQCKPQVFRSVYVHWASRSRNGKTGEDH 844
Query: 473 VDIITFYNKIFAPTVKPLLVELGPVGTAMKTNR-----DSEVNHNNDASVFPALPDMSPK 527
VDIITFYN++F PTVKPLLVEL + K N D + S FP LPDMSPK
Sbjct: 845 VDIITFYNEVFIPTVKPLLVELRSGTSPNKKNEEKCAADGPYPESPRLSRFPNLPDMSPK 904
Query: 528 KVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNRRV 586
KVSA H+VYVSPLRTS+MD L+S SSKSYYACVGESTHA+ SP KDL IN+RLNS ++V
Sbjct: 905 KVSAAHNVYVSPLRTSKMDTLLSPSSKSYYACVGESTHAFQSPSKDLKVINNRLNSGKKV 964
Query: 587 RGALNFDDVDVDVGLVSDSMVVNSLYLQN 615
G LNFD +VSD +V SL QN
Sbjct: 965 SGRLNFD-------VVSDLVVARSLSDQN 986
>gi|413925045|gb|AFW64977.1| hypothetical protein ZEAMMB73_003481 [Zea mays]
Length = 1002
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 353/694 (50%), Positives = 425/694 (61%), Gaps = 154/694 (22%)
Query: 9 AVNITGAKRKFDSLASPVKTITSP---------LSPHHSS--TSKMV-VTPVSTAMTTAK 56
A+N+ G KRK+D +ASP K+I+SP LSP +S SKM +TPVSTAMTTAK
Sbjct: 366 AINLPGTKRKYDVMASPAKSISSPNPMSPPRFCLSPKGNSFCNSKMAPITPVSTAMTTAK 425
Query: 57 WLRTIICPLPSKPSADL----------------------------------------QGA 76
WLR+ + PLPSKPS +L + A
Sbjct: 426 WLRSTVSPLPSKPSGELLRFFSACDKDVTDDIVHRAGIILGAIFTSSSFGEQICTNMRSA 485
Query: 77 NLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELV 131
N MD IW EQR++EALKL Y+VLE+MC AE+Q+L NLT L FHRCM+ACSAELV
Sbjct: 486 NRMDAIWTEQRKMEALKLYYRVLESMCRAESQILSGNNLTLLLSNERFHRCMIACSAELV 545
Query: 132 LATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
LATHKTVT++F AVLE+ GITAF+LSKVI+ F+RHE++LPREL+RHLNSLEERLLESM W
Sbjct: 546 LATHKTVTLMFPAVLEKTGITAFDLSKVIEGFVRHEDTLPRELKRHLNSLEERLLESMSW 605
Query: 192 EKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYEN 250
EKGSSMYNSL VARP LS EIN LG
Sbjct: 606 EKGSSMYNSLIVARPVLSIEINRLGL---------------------------------- 631
Query: 251 LPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFY 310
L PMPSLDAIA H N S GGL P+ + I +
Sbjct: 632 ---------------LAEPMPSLDAIAAHHNISMGGLPPLPFQKQERLQDKDEIRS---- 672
Query: 311 ANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGGG 365
+ + R V V+ N+F S VKD + LK LPPPL PTR NP G
Sbjct: 673 ----PKRACTERRHVPVDSNSFRSQVKDSI----KLK---LPPPLQSAFASPTRPNPAAG 721
Query: 366 GEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNC 425
GE CAETGI + F KI+KLAA+RI ++ ERLQLSQQ+ E VY L ++ L+Q+T LFFN
Sbjct: 722 GETCAETGIAVFFSKISKLAAIRIRSLCERLQLSQQVLERVYSLV-QQILSQQTGLFFNR 780
Query: 426 HIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------D 471
HIDQIILC YGVAKISQL L+FKEI++ Y KQPQCKPQVFRSV+ D
Sbjct: 781 HIDQIILCSIYGVAKISQLQLSFKEIVFGYRKQPQCKPQVFRSVYVHWPPTSHNGKTGED 840
Query: 472 HVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASV--FPALPDMSPKKV 529
HVDIITFYN++F P VKPLLVE+GP G + K + + + + FP LPDMSPKKV
Sbjct: 841 HVDIITFYNEVFIPAVKPLLVEVGP-GASPKRKEEGKGPYPESPRLARFPNLPDMSPKKV 899
Query: 530 SATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNRRVRG 588
SATH+VYVSPLR+S+MD L+S S KSYYACVGEST+A+ SP KDL IN+RLNS ++V G
Sbjct: 900 SATHNVYVSPLRSSKMDTLLSPSPKSYYACVGESTYAFQSPSKDLKAINNRLNSWKKVSG 959
Query: 589 ALNFDDVDVDVGLVSDSMVVNSLY-LQNGSAAAS 621
LNFD +VSD +V +SL +QN AA+
Sbjct: 960 RLNFD-------IVSDLVVASSLNGVQNAKPAAT 986
>gi|414869735|tpg|DAA48292.1| TPA: hypothetical protein ZEAMMB73_291588 [Zea mays]
Length = 1009
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 352/714 (49%), Positives = 424/714 (59%), Gaps = 163/714 (22%)
Query: 9 AVNITGAKRKFDSLASPVKTITSP---------LSPHHSS--TSKMV-VTPVSTAMTTAK 56
A+N+ G KRK+D +ASP K+I+SP LSP + SKM TPVSTAMTTAK
Sbjct: 367 AINLPGTKRKYDVMASPAKSISSPNPMSPPRFCLSPKGNGFCNSKMAPSTPVSTAMTTAK 426
Query: 57 WLRTIICPLPSKPSADL----------------------------------------QGA 76
WLR + PLPS+PS +L + A
Sbjct: 427 WLRNTVSPLPSRPSGELLRFFSACDKDLTDDIAHRAGIILGAIFTSSSFGERICTSMRSA 486
Query: 77 NLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELV 131
+ MD IW EQR++EALKL Y+VLE+MC AE+Q+L NLTSL FHRCM+ACSAELV
Sbjct: 487 SRMDAIWTEQRKMEALKLYYRVLESMCRAESQILSGNNLTSLLSNERFHRCMIACSAELV 546
Query: 132 LATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
LATHKTVTM+F AVLE+ GITAF+LSKVI+ F+RHE++LPREL+RHLNSLEERLLESM W
Sbjct: 547 LATHKTVTMMFPAVLEKTGITAFDLSKVIEGFVRHEDTLPRELKRHLNSLEERLLESMAW 606
Query: 192 EKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYEN 250
EKGSSMYNSL VARPALS EI+ LG
Sbjct: 607 EKGSSMYNSLIVARPALSVEISRLGL---------------------------------- 632
Query: 251 LPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFY 310
L PMPSLDAIA H N S GGL P+ K E Q
Sbjct: 633 ---------------LAEPMPSLDAIAAHHNISLGGLPPL-PFQKQE--------RLQDK 668
Query: 311 ANCYG-ELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGG 364
+ + R+VLV+ N+ S VKD + KP PPL PTR NP
Sbjct: 669 DEVRSPKRACTERRNVLVDSNSLRSPVKDII--------KPKLPPLQSAFASPTRPNPAA 720
Query: 365 GGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFN 424
GGE CAETGI + F KI+KLAA+RI ++ ERLQL QQ+ E VY L ++ L+Q+T LFFN
Sbjct: 721 GGETCAETGIGVFFSKISKLAAIRIRSLCERLQLPQQVLERVYSLV-QQILSQQTGLFFN 779
Query: 425 CHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-------------- 470
HIDQIILC YGVAKISQL L+FKEII+ Y KQPQCKPQVFRSV+
Sbjct: 780 RHIDQIILCSIYGVAKISQLELSFKEIIFGYRKQPQCKPQVFRSVYVHWPPRSRNGKTGE 839
Query: 471 DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA-------SVFPALPD 523
DHVDIITFYN++F P VK LLVE+GP +A ++ E + + FP LPD
Sbjct: 840 DHVDIITFYNEVFIPAVKSLLVEVGPGASASPKKKEEEKGPADGPFPESPRLARFPNLPD 899
Query: 524 MSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNS 582
MSPKKVSATH+VYVSPLR+S+MD L+S SSKSYYACVGEST+A+ SP KDL IN+RLNS
Sbjct: 900 MSPKKVSATHNVYVSPLRSSKMDTLLSPSSKSYYACVGESTYAFQSPSKDLKAINNRLNS 959
Query: 583 ---NRRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPEQLDP 633
++V G LNFD +VSD +V +SL + A+ A P + +P
Sbjct: 960 VSGGKKVSGRLNFD-------VVSDLVVASSLGSDRDAKPAADPAKTTPVKCEP 1006
>gi|162461964|ref|NP_001105822.1| retinoblastoma-related protein 3 [Zea mays]
gi|122239408|sp|Q3LXA7.1|RBR3_MAIZE RecName: Full=Retinoblastoma-related protein 3; Short=ZmRBR3
gi|74099767|gb|AAZ99092.1| retinoblastoma-related 3 [Zea mays]
gi|414869737|tpg|DAA48294.1| TPA: retinoblastoma protein 3 [Zea mays]
Length = 1010
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 352/715 (49%), Positives = 424/715 (59%), Gaps = 164/715 (22%)
Query: 9 AVNITGAKRKFDSLASPVKTITSP---------LSPHHSS--TSKMV-VTPVSTAMTTAK 56
A+N+ G KRK+D +ASP K+I+SP LSP + SKM TPVSTAMTTAK
Sbjct: 367 AINLPGTKRKYDVMASPAKSISSPNPMSPPRFCLSPKGNGFCNSKMAPSTPVSTAMTTAK 426
Query: 57 WLRTIICPLPSKPSADL----------------------------------------QGA 76
WLR + PLPS+PS +L + A
Sbjct: 427 WLRNTVSPLPSRPSGELLRFFSACDKDLTDDIAHRAGIILGAIFTSSSFGERICTSMRSA 486
Query: 77 NLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELV 131
+ MD IW EQR++EALKL Y+VLE+MC AE+Q+L NLTSL FHRCM+ACSAELV
Sbjct: 487 SRMDAIWTEQRKMEALKLYYRVLESMCRAESQILSGNNLTSLLSNERFHRCMIACSAELV 546
Query: 132 LATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
LATHKTVTM+F AVLE+ GITAF+LSKVI+ F+RHE++LPREL+RHLNSLEERLLESM W
Sbjct: 547 LATHKTVTMMFPAVLEKTGITAFDLSKVIEGFVRHEDTLPRELKRHLNSLEERLLESMAW 606
Query: 192 EKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYEN 250
EKGSSMYNSL VARPALS EI+ LG
Sbjct: 607 EKGSSMYNSLIVARPALSVEISRLGL---------------------------------- 632
Query: 251 LPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFY 310
L PMPSLDAIA H N S GGL P+ K E Q
Sbjct: 633 ---------------LAEPMPSLDAIAAHHNISLGGLPPL-PFQKQE--------RLQDK 668
Query: 311 ANCYG-ELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGG 364
+ + R+VLV+ N+ S VKD + KP PPL PTR NP
Sbjct: 669 DEVRSPKRACTERRNVLVDSNSLRSPVKDII--------KPKLPPLQSAFASPTRPNPAA 720
Query: 365 GGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFN 424
GGE CAETGI + F KI+KLAA+RI ++ ERLQL QQ+ E VY L ++ L+Q+T LFFN
Sbjct: 721 GGETCAETGIGVFFSKISKLAAIRIRSLCERLQLPQQVLERVYSLV-QQILSQQTGLFFN 779
Query: 425 CHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-------------- 470
HIDQIILC YGVAKISQL L+FKEII+ Y KQPQCKPQVFRSV+
Sbjct: 780 RHIDQIILCSIYGVAKISQLELSFKEIIFGYRKQPQCKPQVFRSVYVHWPPRSRNGKTGE 839
Query: 471 DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVN--------HNNDASVFPALP 522
DHVDIITFYN++F P VK LLVE+GP +A ++ E + + FP LP
Sbjct: 840 DHVDIITFYNEVFIPAVKSLLVEVGPGASASPKKKEEEKGPADVGPFPESPRLARFPNLP 899
Query: 523 DMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLN 581
DMSPKKVSATH+VYVSPLR+S+MD L+S SSKSYYACVGEST+A+ SP KDL IN+RLN
Sbjct: 900 DMSPKKVSATHNVYVSPLRSSKMDTLLSPSSKSYYACVGESTYAFQSPSKDLKAINNRLN 959
Query: 582 S---NRRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPEQLDP 633
S ++V G LNFD +VSD +V +SL + A+ A P + +P
Sbjct: 960 SVSGGKKVSGRLNFD-------VVSDLVVASSLGSDRDAKPAADPAKTTPVKCEP 1007
>gi|414869736|tpg|DAA48293.1| TPA: hypothetical protein ZEAMMB73_291588 [Zea mays]
Length = 980
Score = 566 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 335/660 (50%), Positives = 398/660 (60%), Gaps = 154/660 (23%)
Query: 9 AVNITGAKRKFDSLASPVKTITSP---------LSPHHSS--TSKMV-VTPVSTAMTTAK 56
A+N+ G KRK+D +ASP K+I+SP LSP + SKM TPVSTAMTTAK
Sbjct: 367 AINLPGTKRKYDVMASPAKSISSPNPMSPPRFCLSPKGNGFCNSKMAPSTPVSTAMTTAK 426
Query: 57 WLRTIICPLPSKPSADL----------------------------------------QGA 76
WLR + PLPS+PS +L + A
Sbjct: 427 WLRNTVSPLPSRPSGELLRFFSACDKDLTDDIAHRAGIILGAIFTSSSFGERICTSMRSA 486
Query: 77 NLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELV 131
+ MD IW EQR++EALKL Y+VLE+MC AE+Q+L NLTSL FHRCM+ACSAELV
Sbjct: 487 SRMDAIWTEQRKMEALKLYYRVLESMCRAESQILSGNNLTSLLSNERFHRCMIACSAELV 546
Query: 132 LATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
LATHKTVTM+F AVLE+ GITAF+LSKVI+ F+RHE++LPREL+RHLNSLEERLLESM W
Sbjct: 547 LATHKTVTMMFPAVLEKTGITAFDLSKVIEGFVRHEDTLPRELKRHLNSLEERLLESMAW 606
Query: 192 EKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYEN 250
EKGSSMYNSL VARPALS EI+ LG
Sbjct: 607 EKGSSMYNSLIVARPALSVEISRLGL---------------------------------- 632
Query: 251 LPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFY 310
L PMPSLDAIA H N S GGL P+ K E Q
Sbjct: 633 ---------------LAEPMPSLDAIAAHHNISLGGLPPL-PFQKQE--------RLQDK 668
Query: 311 ANCYG-ELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGG 364
+ + R+VLV+ N+ S VKD + KP PPL PTR NP
Sbjct: 669 DEVRSPKRACTERRNVLVDSNSLRSPVKDII--------KPKLPPLQSAFASPTRPNPAA 720
Query: 365 GGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFN 424
GGE CAETGI + F KI+KLAA+RI ++ ERLQL QQ+ E VY L ++ L+Q+T LFFN
Sbjct: 721 GGETCAETGIGVFFSKISKLAAIRIRSLCERLQLPQQVLERVYSLV-QQILSQQTGLFFN 779
Query: 425 CHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-------------- 470
HIDQIILC YGVAKISQL L+FKEII+ Y KQPQCKPQVFRSV+
Sbjct: 780 RHIDQIILCSIYGVAKISQLELSFKEIIFGYRKQPQCKPQVFRSVYVHWPPRSRNGKTGE 839
Query: 471 DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVN--------HNNDASVFPALP 522
DHVDIITFYN++F P VK LLVE+GP +A ++ E + + FP LP
Sbjct: 840 DHVDIITFYNEVFIPAVKSLLVEVGPGASASPKKKEEEKGPADVGPFPESPRLARFPNLP 899
Query: 523 DMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLN 581
DMSPKKVSATH+VYVSPLR+S+MD L+S SSKSYYACVGEST+A+ SP KDL IN+RLN
Sbjct: 900 DMSPKKVSATHNVYVSPLRSSKMDTLLSPSSKSYYACVGESTYAFQSPSKDLKAINNRLN 959
>gi|414876195|tpg|DAA53326.1| TPA: hypothetical protein ZEAMMB73_924087 [Zea mays]
Length = 505
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 301/562 (53%), Positives = 360/562 (64%), Gaps = 102/562 (18%)
Query: 89 LEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFL 143
+EALKL Y+VLE+MC AE+Q+L NLT L FHRCM+ACSAELVLATHKTVT++F
Sbjct: 1 MEALKLYYRVLESMCRAESQILSGNNLTLLLSNERFHRCMIACSAELVLATHKTVTLMFP 60
Query: 144 AVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTV 203
AVLE+ GITAF+LSKVI+ F+RHE++LPREL+RHLNSLEERLLESM WEKGSSMYNSL V
Sbjct: 61 AVLEKTGITAFDLSKVIEGFVRHEDTLPRELKRHLNSLEERLLESMSWEKGSSMYNSLIV 120
Query: 204 ARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEPFTEVD 262
ARP LS EIN LG
Sbjct: 121 ARPVLSIEINRLGL---------------------------------------------- 134
Query: 263 SIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELVTDDY 322
L PMPSLDAIA H N S GGL P+ + I + + +
Sbjct: 135 ---LAEPMPSLDAIAAHHNISMGGLPPLPFQKQERLQDKDEIRS--------PKRACTER 183
Query: 323 RSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGGGGEPCAETGINIC 377
R V V+ N+F S VKD + LK LPPPL PTR NP GGE CAETGI +
Sbjct: 184 RHVPVDSNSFRSQVKDSI----KLK---LPPPLQSAFASPTRPNPAAGGETCAETGIAVF 236
Query: 378 FCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYG 437
F KI+KLAA+RI ++ ERLQLSQQ+ E VY L ++ L+Q+T LFFN HIDQIILC YG
Sbjct: 237 FSKISKLAAIRIRSLCERLQLSQQVLERVYSLV-QQILSQQTGLFFNRHIDQIILCSIYG 295
Query: 438 VAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DHVDIITFYNKIF 483
VAKISQL L+FKEI++ Y KQPQCKPQVFRSV+ DHVDIITFYN++F
Sbjct: 296 VAKISQLQLSFKEIVFGYRKQPQCKPQVFRSVYVHWPPTSHNGKTGEDHVDIITFYNEVF 355
Query: 484 APTVKPLLVELGPVGTAMKTNRDSEVNHNNDASV--FPALPDMSPKKVSATHSVYVSPLR 541
P VKPLLVE+GP G + K + + + + FP LPDMSPKKVSATH+VYVSPLR
Sbjct: 356 IPAVKPLLVEVGP-GASPKRKEEGKGPYPESPRLARFPNLPDMSPKKVSATHNVYVSPLR 414
Query: 542 TSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNRRVRGALNFDDVDVDVG 600
+S+MD L+S S KSYYACVGEST+A+ SP KDL IN+RLNS ++V G LNFD
Sbjct: 415 SSKMDTLLSPSPKSYYACVGESTYAFQSPSKDLKAINNRLNSWKKVSGRLNFD------- 467
Query: 601 LVSDSMVVNSLY-LQNGSAAAS 621
+VSD +V +SL +QN AA+
Sbjct: 468 IVSDLVVASSLNGVQNAKPAAT 489
>gi|115485753|ref|NP_001068020.1| Os11g0533500 [Oryza sativa Japonica Group]
gi|122248791|sp|Q2R374.2|RBR2_ORYSJ RecName: Full=Retinoblastoma-related protein 2; Short=OsRBR2
gi|108864448|gb|ABA94065.2| retinoblastoma-related protein 1, putative, expressed [Oryza sativa
Japonica Group]
gi|113645242|dbj|BAF28383.1| Os11g0533500 [Oryza sativa Japonica Group]
gi|215694317|dbj|BAG89310.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222616086|gb|EEE52218.1| hypothetical protein OsJ_34123 [Oryza sativa Japonica Group]
Length = 978
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 316/695 (45%), Positives = 404/695 (58%), Gaps = 143/695 (20%)
Query: 7 GGAVNITGAKRKFDSLASPVKTITSPLSP--------HHSSTSKMVVTPVSTAMTTAKWL 58
G + N +KR F++LASP KTI + L+ + S + +TPV++AMTTAKWL
Sbjct: 338 GSSANFGCSKRVFETLASPTKTIKNMLAAPSSPSSPANGGSIKIVQMTPVTSAMTTAKWL 397
Query: 59 RTIICPLPSKPSADLQG----------------------------------------ANL 78
R +I LP KPS+ L+ AN
Sbjct: 398 RDVISSLPDKPSSKLEEFLSSCDTDLTSDVVKRVSIILEAIFPTKSIDRGTSIGLNCANA 457
Query: 79 MDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLA 133
D WAE R++EA KL Y+VLE +C AE+Q + NLT L FHRC++ACSAELVLA
Sbjct: 458 FDIPWAEARKMEASKLYYRVLEAICRAESQNNNVNNLTPLLSNERFHRCLIACSAELVLA 517
Query: 134 THKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEK 193
THKTV M+F AVLE G+TAF+LSK+I++F+RHEE+LPREL+RHLNSLEE+LLESM WEK
Sbjct: 518 THKTVIMMFPAVLESTGLTAFDLSKIIENFVRHEETLPRELKRHLNSLEEQLLESMSWEK 577
Query: 194 GSSMYNSLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPW 253
GSS+YNSL VARP+LS
Sbjct: 578 GSSLYNSLVVARPSLS-------------------------------------------- 593
Query: 254 WKEPFTEVDSIFLLI-PMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYAN 312
TE++S+ LL PMPSLD I + GL P S P N
Sbjct: 594 -----TEINSLGLLAEPMPSLDGIVARQSIHPDGLPPTPSKRWPSAGP---------DGN 639
Query: 313 CYGE---LVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSK--PLPPPLY-PTRSNPGGGG 366
CY + + + R+ LVERN+ T K GL+ LK+K PL PT SNP G
Sbjct: 640 CYPQSPKRLCTESRNSLVERNSQTPPPKQSQTGLSILKAKYHPLQATFASPTVSNPVSGN 699
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
E CA G+ I F KI KLAA+RI + ERL+ +++ SVY + K+ L+Q+T+LFFN H
Sbjct: 700 EKCAVVGVQIFFSKILKLAAIRIRNLCERLR-HEELTVSVYNIF-KQILDQQTALFFNRH 757
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------DHVD 474
+DQIILCC YGVAK+SQL+LTFKEI+ NY ++PQCKP+VFRS+F HVD
Sbjct: 758 VDQIILCCLYGVAKVSQLSLTFKEIVNNYKREPQCKPEVFRSIFVGSTNRNGGFGSRHVD 817
Query: 475 IITFYNKIFAPTVKPLLVELGPVGT--AMKTNRDSEVNHNNDASVFPALPDMSPKKVSAT 532
II FYN++F PTVKPLLV L P T K N +S++ + +S F LPDMSPKKVS++
Sbjct: 818 IIVFYNQVFVPTVKPLLVALMPSSTRPEDKRNTNSQIPGSPKSSPFSNLPDMSPKKVSSS 877
Query: 533 HSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLN-SNRRVRGAL 590
H+VYVSPLR ++MDAL+S SS+S+YAC+GEST A+ SP KDL IN RLN RR+ +
Sbjct: 878 HNVYVSPLRQTKMDALLSPSSRSFYACIGESTQAFQSPSKDLAAINSRLNYPTRRINTRI 937
Query: 591 NFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAV 625
NFD +VSDS+V SL NG +A+S A
Sbjct: 938 NFD-------MVSDSVVAGSLGQPNGGSASSDPAA 965
>gi|218185868|gb|EEC68295.1| hypothetical protein OsI_36358 [Oryza sativa Indica Group]
Length = 978
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 315/695 (45%), Positives = 404/695 (58%), Gaps = 143/695 (20%)
Query: 7 GGAVNITGAKRKFDSLASPVKTITSPLSP--------HHSSTSKMVVTPVSTAMTTAKWL 58
G + N +KR F++LASP KTI + L+ + S + +TPV++AMTTAKWL
Sbjct: 338 GSSANFGCSKRVFETLASPTKTIKNMLAAPSSPSSPANGGSIKIVQMTPVTSAMTTAKWL 397
Query: 59 RTIICPLPSKPSADLQG----------------------------------------ANL 78
R +I LP KPS+ L+ AN
Sbjct: 398 RDVISSLPDKPSSKLEEFLSSCDMDLTSDVVKRVSIILEAIFPTKSIDRGTSIGLNCANA 457
Query: 79 MDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLA 133
D WAE R++EA KL Y+VLE +C AE+Q + NLT L FHRC++ACSAELVLA
Sbjct: 458 FDIPWAEARKMEASKLYYRVLEAICRAESQNNNVNNLTPLLSNERFHRCLIACSAELVLA 517
Query: 134 THKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEK 193
THKTV M+F AVLE G+TAF+LSK+I++F+RHEE+LPREL+RHLNSLEE+LLESM WEK
Sbjct: 518 THKTVIMMFPAVLESTGLTAFDLSKIIENFVRHEETLPRELKRHLNSLEEQLLESMSWEK 577
Query: 194 GSSMYNSLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPW 253
GSS+YNSL VARP+LS
Sbjct: 578 GSSLYNSLVVARPSLS-------------------------------------------- 593
Query: 254 WKEPFTEVDSIFLLI-PMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYAN 312
TE++S+ LL PMPSLD I + GL P S + P N
Sbjct: 594 -----TEINSLGLLAEPMPSLDGIVARQSIHPDGLPPTPSKRRPSAGP---------DGN 639
Query: 313 CYGE---LVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSK--PLPPPLY-PTRSNPGGGG 366
CY + + + R+ LVE N+ T K GL+ LK+K PL PT SNP G
Sbjct: 640 CYPQSPKRLCTESRNSLVEHNSQTPPPKQSQTGLSILKAKYHPLQATFASPTVSNPVSGN 699
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
E CA G+ I F KI KLAA+RI + ERL+ +++ SVY + K+ L+Q+T+LFFN H
Sbjct: 700 EKCAVVGVQIFFSKILKLAAIRIRNLCERLR-HEELTVSVYNIF-KQILDQQTALFFNRH 757
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------DHVD 474
+DQIILCC YGVAK+SQL+LTFKEI+ NY ++PQCKP+VFRS+F HVD
Sbjct: 758 VDQIILCCLYGVAKVSQLSLTFKEIVNNYKREPQCKPEVFRSIFVGSTNRNGGFGSRHVD 817
Query: 475 IITFYNKIFAPTVKPLLVELGPVGT--AMKTNRDSEVNHNNDASVFPALPDMSPKKVSAT 532
II FYN++F PTVKPLLV L P T K N +S++ + +S F LPDMSPKKVS++
Sbjct: 818 IIVFYNQVFVPTVKPLLVALMPSSTRPEDKRNTNSQIPGSPKSSPFSNLPDMSPKKVSSS 877
Query: 533 HSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLN-SNRRVRGAL 590
H+VYVSPLR ++MDAL+S SS+S+YAC+GEST A+ SP KDL IN RLN RR+ +
Sbjct: 878 HNVYVSPLRQTKMDALLSPSSRSFYACIGESTQAFQSPSKDLAAINSRLNYPTRRINTRI 937
Query: 591 NFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAV 625
NFD +VSDS+V SL NG +A+S A
Sbjct: 938 NFD-------MVSDSVVAGSLGQPNGGSASSDPAA 965
>gi|62956053|gb|AAY23369.1| retinoblastoma-related protein 2 [Oryza sativa]
Length = 978
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 315/695 (45%), Positives = 404/695 (58%), Gaps = 143/695 (20%)
Query: 7 GGAVNITGAKRKFDSLASPVKTITSPLSP--------HHSSTSKMVVTPVSTAMTTAKWL 58
G + N +KR F++LASP KTI + L+ + S + +TPV++AMTTAKWL
Sbjct: 338 GSSANFGCSKRVFETLASPTKTIKNMLAAPSSPSSPANGGSIKIVQMTPVTSAMTTAKWL 397
Query: 59 RTIICPLPSKPSADLQG----------------------------------------ANL 78
R +I LP KPS+ L+ AN
Sbjct: 398 RDVISSLPDKPSSKLEEFLSSCNMDLTSDVVKRVSIILEAIFPTKSIDRGTSIGLNCANA 457
Query: 79 MDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLA 133
D WAE R++EA KL Y+VLE +C AE+Q + NLT L FHRC++ACSAELVLA
Sbjct: 458 FDIPWAEARKMEASKLYYRVLEAICRAESQNNNVNNLTPLLSNERFHRCLIACSAELVLA 517
Query: 134 THKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEK 193
THKTV M+F AVLE G+TAF+LSK+I++F+RHEE+LPREL+RHLNSLEE+LLESM WEK
Sbjct: 518 THKTVIMMFPAVLESTGLTAFDLSKIIENFVRHEETLPRELKRHLNSLEEQLLESMSWEK 577
Query: 194 GSSMYNSLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPW 253
GSS+YNSL VARP+LS
Sbjct: 578 GSSLYNSLVVARPSLS-------------------------------------------- 593
Query: 254 WKEPFTEVDSIFLLI-PMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYAN 312
TE++S+ LL PMPSLD I + GL P S + P N
Sbjct: 594 -----TEINSLGLLAEPMPSLDGIVARQSIHPDGLPPTPSKRRPSAGP---------DGN 639
Query: 313 CYGE---LVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSK--PLPPPLY-PTRSNPGGGG 366
CY + + + R+ LVE N+ T K GL+ LK+K PL PT SNP G
Sbjct: 640 CYPQSPKRLCTESRNSLVEHNSQTPPPKQSQTGLSILKAKYHPLQATFASPTVSNPVSGN 699
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
E CA G+ I F KI KLAA+RI + ERL+ +++ SVY + K+ L+Q+T+LFFN H
Sbjct: 700 EKCAVVGVQIFFSKILKLAAIRIRNLCERLR-HEELTVSVYNIF-KQILDQQTALFFNRH 757
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------DHVD 474
+DQIILCC YGVAK+SQL+LTFKEI+ NY ++PQCKP+VFRS+F HVD
Sbjct: 758 VDQIILCCLYGVAKVSQLSLTFKEIVNNYKREPQCKPEVFRSIFVGSTNRNGGFGSRHVD 817
Query: 475 IITFYNKIFAPTVKPLLVELGPVGT--AMKTNRDSEVNHNNDASVFPALPDMSPKKVSAT 532
II FYN++F PTVKPLLV L P T K N +S++ + +S F LPDMSPKKVS++
Sbjct: 818 IIVFYNQVFVPTVKPLLVALMPSSTRPEDKRNTNSQIPGSPKSSPFSNLPDMSPKKVSSS 877
Query: 533 HSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLN-SNRRVRGAL 590
H+VYVSPLR ++MDAL+S SS+S+YAC+GEST A+ SP KDL IN RLN RR+ +
Sbjct: 878 HNVYVSPLRQTKMDALLSPSSRSFYACIGESTQAFQSPSKDLAAINSRLNYPTRRINTRI 937
Query: 591 NFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAV 625
NFD +VSDS+V SL NG +A+S A
Sbjct: 938 NFD-------MVSDSVVAGSLGQPNGGSASSDPAA 965
>gi|9716502|gb|AAF97520.1|AF250050_1 retinoblastoma related protein RBR1 [Zea mays]
Length = 867
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 308/696 (44%), Positives = 393/696 (56%), Gaps = 139/696 (19%)
Query: 7 GGAVNITGAKRKFDSLASPVKTI-------TSPLSPHHSSTSKMV-VTPVSTAMTTAKWL 58
G + N+ +K F++LASP KTI +SPLSP + K+V +TPV++AMTTAKWL
Sbjct: 228 GDSTNLGHSKCAFETLASPTKTIKNMLTVPSSPLSPATGGSVKIVQMTPVTSAMTTAKWL 287
Query: 59 RTIICPLPSKPSADLQG-----------------------------------------AN 77
R +I LP KPS+ LQ AN
Sbjct: 288 REVISSLPDKPSSKLQQFLSSCDRDLTNAVTERVSIVLEAIFPTKSSANRGVSLGLNCAN 347
Query: 78 LMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVL 132
D WAE R++EA KL Y+VLE +C AE Q + NLT L FHRC++ACSA+LVL
Sbjct: 348 AFDIPWAEARKVEASKLYYRVLEAICRAELQNSNVNNLTPLLSNERFHRCLIACSADLVL 407
Query: 133 ATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWE 192
ATHKTV M+F AVLE G+TAF+LSK+I++F+RHEE+LPREL+RHLNSLEE+LLESM WE
Sbjct: 408 ATHKTVIMMFPAVLESTGLTAFDLSKIIENFVRHEETLPRELKRHLNSLEEQLLESMAWE 467
Query: 193 KGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENL 251
KGSS+YNSL VARP++++EIN LG
Sbjct: 468 KGSSLYNSLIVARPSVASEINRLGL----------------------------------- 492
Query: 252 PWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYA 311
L PMPSLD + N GL P K P +
Sbjct: 493 --------------LAEPMPSLDDLVSRQNVRIEGL-PATPSKKRAAGPDDNSDPRSPKR 537
Query: 312 NCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSK--PLPPPLY-PTRSNPGGGGEP 368
+C +++R+ +VERN T K + +LK+K PL PT NP GG E
Sbjct: 538 SC------NEFRNTVVERNLQTPPPKQSHMVSTSLKAKCHPLQSTFASPTVCNPVGGNEK 591
Query: 369 CAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHID 428
CA+ I+I F KI KLAA+RI + ER+Q +Q E VY + K+ L Q+T+LFFN HID
Sbjct: 592 CADLTIHIFFSKILKLAAIRIRNLCERVQCVEQT-ERVYNVF-KQILEQQTTLFFNRHID 649
Query: 429 QIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------DHVDII 476
Q+ILCC YGVAK+ QL LTF+EI+ NY ++ QCKP+VF S++ HV II
Sbjct: 650 QLILCCLYGVAKVCQLELTFREILNNYKREAQCKPEVFSSIYIGSTNRNGVLVSRHVGII 709
Query: 477 TFYNKIFAPTVKPLLVELGPVGT--AMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHS 534
TFYN++F P KP LV L GT K N ++ + S FP LPDMSPKKVSA+H+
Sbjct: 710 TFYNEVFVPAAKPFLVSLISSGTHPEDKKNASGQIPGSPKPSPFPNLPDMSPKKVSASHN 769
Query: 535 VYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSN-RRVRGALNF 592
VYVSPLR +++D L+S SS+S+YAC+GE THAY SP KDL IN RLN N R+V LNF
Sbjct: 770 VYVSPLRQTKLDLLLSPSSRSFYACIGEGTHAYQSPSKDLAAINSRLNYNGRKVNSRLNF 829
Query: 593 DDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKP 628
D +VSDS+V SL NG + + A P
Sbjct: 830 D-------MVSDSVVAGSLGQINGGSTSDPAAAFSP 858
>gi|1617474|emb|CAA67422.1| Rb1 protein [Zea mays]
Length = 683
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 308/696 (44%), Positives = 392/696 (56%), Gaps = 139/696 (19%)
Query: 7 GGAVNITGAKRKFDSLASPVKTI-------TSPLSPHHSSTSKMV-VTPVSTAMTTAKWL 58
G + N+ +K F++LASP KTI +SPLSP + K+V +TPV++AMTTAKWL
Sbjct: 44 GDSTNLGHSKCAFETLASPTKTIKNMLTVPSSPLSPATGGSVKIVQMTPVTSAMTTAKWL 103
Query: 59 RTIICPLPSKPSADLQG-----------------------------------------AN 77
R +I LP KPS+ LQ AN
Sbjct: 104 REVISSLPDKPSSKLQQFLSSCDRDLTNAVTERVSIVLEAIFPTKSSANRGVSLGLNCAN 163
Query: 78 LMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVL 132
D WAE R++EA KL Y+VLE +C AE Q + NLT L FHRC++ACSA+LVL
Sbjct: 164 AFDIPWAEARKVEASKLYYRVLEAICRAELQNSNVNNLTPLLSNERFHRCLIACSADLVL 223
Query: 133 ATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWE 192
ATHKTV M+F AVLE G+TAF+LSK+I++F+RHEE+LPREL+RHLNSLEE+LLESM WE
Sbjct: 224 ATHKTVIMMFPAVLESTGLTAFDLSKIIENFVRHEETLPRELKRHLNSLEEQLLESMAWE 283
Query: 193 KGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENL 251
KGSS+YNSL VARP++++EIN LG
Sbjct: 284 KGSSLYNSLIVARPSVASEINRLGL----------------------------------- 308
Query: 252 PWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYA 311
L PMPSLD + N GL P K P +
Sbjct: 309 --------------LAEPMPSLDDLVSRQNVRIEGL-PATPSKKRAAGPDDNADPRSPKR 353
Query: 312 NCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSK--PLPPPLY-PTRSNPGGGGEP 368
+C ++ R+ +VERN T K + +LK+K PL PT NP GG E
Sbjct: 354 SC------NESRNTVVERNLQTPPPKQSHMVSTSLKAKCHPLQSTFASPTVCNPVGGNEK 407
Query: 369 CAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHID 428
CA+ I+I F KI KLAA+RI + ER+Q +Q E VY + K+ L Q+T+LFFN HID
Sbjct: 408 CADVTIHIFFSKILKLAAIRIRNLCERVQCVEQT-ERVYNVF-KQILEQQTTLFFNRHID 465
Query: 429 QIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------DHVDII 476
Q+ILCC YGVAK+ QL LTF+EI+ NY ++ QCKP+VF S++ HV II
Sbjct: 466 QLILCCLYGVAKVCQLELTFREILNNYKREAQCKPEVFSSIYIGSTNRNGVLVSRHVGII 525
Query: 477 TFYNKIFAPTVKPLLVELGPVGT--AMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHS 534
TFYN++F P KP LV L GT K N ++ + S FP LPDMSPKKVSA+H+
Sbjct: 526 TFYNEVFVPAAKPFLVSLISSGTHPEDKKNASGQIPGSPKPSPFPNLPDMSPKKVSASHN 585
Query: 535 VYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSN-RRVRGALNF 592
VYVSPLR +++D L+S SS+S+YAC+GE THAY SP KDL IN RLN N R+V LNF
Sbjct: 586 VYVSPLRQTKLDLLLSPSSRSFYACIGEGTHAYQSPSKDLAAINSRLNYNGRKVNSRLNF 645
Query: 593 DDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKP 628
D +VSDS+V SL NG + + A P
Sbjct: 646 D-------MVSDSVVAGSLGQINGGSTSDPAAAFSP 674
>gi|189039668|sp|Q9LKX9.2|RBR1_MAIZE RecName: Full=Retinoblastoma-related protein 1; Short=Rb1;
Short=ZmRBR1
gi|414591488|tpg|DAA42059.1| TPA: retinoblastoma1 [Zea mays]
Length = 867
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 308/696 (44%), Positives = 392/696 (56%), Gaps = 139/696 (19%)
Query: 7 GGAVNITGAKRKFDSLASPVKTI-------TSPLSPHHSSTSKMV-VTPVSTAMTTAKWL 58
G + N+ +K F++LASP KTI +SPLSP + K+V +TPV++AMTTAKWL
Sbjct: 228 GDSTNLGHSKCAFETLASPTKTIKNMLTVPSSPLSPATGGSVKIVQMTPVTSAMTTAKWL 287
Query: 59 RTIICPLPSKPSADLQG-----------------------------------------AN 77
R +I LP KPS+ LQ AN
Sbjct: 288 REVISSLPDKPSSKLQQFLSSCDRDLTNAVTERVSIVLEAIFPTKSSANRGVSLGLNCAN 347
Query: 78 LMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVL 132
D WAE R++EA KL Y+VLE +C AE Q + NLT L FHRC++ACSA+LVL
Sbjct: 348 AFDIPWAEARKVEASKLYYRVLEAICRAELQNSNVNNLTPLLSNERFHRCLIACSADLVL 407
Query: 133 ATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWE 192
ATHKTV M+F AVLE G+TAF+LSK+I++F+RHEE+LPREL+RHLNSLEE+LLESM WE
Sbjct: 408 ATHKTVIMMFPAVLESTGLTAFDLSKIIENFVRHEETLPRELKRHLNSLEEQLLESMAWE 467
Query: 193 KGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENL 251
KGSS+YNSL VARP++++EIN LG
Sbjct: 468 KGSSLYNSLIVARPSVASEINRLGL----------------------------------- 492
Query: 252 PWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYA 311
L PMPSLD + N GL P K P +
Sbjct: 493 --------------LAEPMPSLDDLVSRQNVRIEGL-PATPSKKRAAGPDDNADPRSPKR 537
Query: 312 NCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSK--PLPPPLY-PTRSNPGGGGEP 368
+C ++ R+ +VERN T K + +LK+K PL PT NP GG E
Sbjct: 538 SC------NESRNTVVERNLQTPPPKQSHMVSTSLKAKCHPLQSTFASPTVCNPVGGNEK 591
Query: 369 CAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHID 428
CA+ I+I F KI KLAA+RI + ER+Q +Q E VY + K+ L Q+T+LFFN HID
Sbjct: 592 CADVTIHIFFSKILKLAAIRIRNLCERVQCVEQT-ERVYNVF-KQILEQQTTLFFNRHID 649
Query: 429 QIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------DHVDII 476
Q+ILCC YGVAK+ QL LTF+EI+ NY ++ QCKP+VF S++ HV II
Sbjct: 650 QLILCCLYGVAKVCQLELTFREILNNYKREAQCKPEVFSSIYIGSTNRNGVLVSRHVGII 709
Query: 477 TFYNKIFAPTVKPLLVELGPVGT--AMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHS 534
TFYN++F P KP LV L GT K N ++ + S FP LPDMSPKKVSA+H+
Sbjct: 710 TFYNEVFVPAAKPFLVSLISSGTHPEDKKNASGQIPGSPKPSPFPNLPDMSPKKVSASHN 769
Query: 535 VYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSN-RRVRGALNF 592
VYVSPLR +++D L+S SS+S+YAC+GE THAY SP KDL IN RLN N R+V LNF
Sbjct: 770 VYVSPLRQTKLDLLLSPSSRSFYACIGEGTHAYQSPSKDLAAINSRLNYNGRKVNSRLNF 829
Query: 593 DDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKP 628
D +VSDS+V SL NG + + A P
Sbjct: 830 D-------MVSDSVVAGSLGQINGGSTSDPAAAFSP 858
>gi|162462832|ref|NP_001104876.1| retinoblastoma-related protein 1 [Zea mays]
gi|2352795|gb|AAB69649.1| retinoblastoma-related protein 1 [Zea mays]
gi|414591487|tpg|DAA42058.1| TPA: retinoblastoma1 [Zea mays]
Length = 866
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 308/696 (44%), Positives = 392/696 (56%), Gaps = 139/696 (19%)
Query: 7 GGAVNITGAKRKFDSLASPVKTI-------TSPLSPHHSSTSKMV-VTPVSTAMTTAKWL 58
G + N+ +K F++LASP KTI +SPLSP + K+V +TPV++AMTTAKWL
Sbjct: 227 GDSTNLGHSKCAFETLASPTKTIKNMLTVPSSPLSPATGGSVKIVQMTPVTSAMTTAKWL 286
Query: 59 RTIICPLPSKPSADLQG-----------------------------------------AN 77
R +I LP KPS+ LQ AN
Sbjct: 287 REVISSLPDKPSSKLQQFLSSCDRDLTNAVTERVSIVLEAIFPTKSSANRGVSLGLNCAN 346
Query: 78 LMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVL 132
D WAE R++EA KL Y+VLE +C AE Q + NLT L FHRC++ACSA+LVL
Sbjct: 347 AFDIPWAEARKVEASKLYYRVLEAICRAELQNSNVNNLTPLLSNERFHRCLIACSADLVL 406
Query: 133 ATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWE 192
ATHKTV M+F AVLE G+TAF+LSK+I++F+RHEE+LPREL+RHLNSLEE+LLESM WE
Sbjct: 407 ATHKTVIMMFPAVLESTGLTAFDLSKIIENFVRHEETLPRELKRHLNSLEEQLLESMAWE 466
Query: 193 KGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENL 251
KGSS+YNSL VARP++++EIN LG
Sbjct: 467 KGSSLYNSLIVARPSVASEINRLGL----------------------------------- 491
Query: 252 PWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYA 311
L PMPSLD + N GL P K P +
Sbjct: 492 --------------LAEPMPSLDDLVSRQNVRIEGL-PATPSKKRAAGPDDNADPRSPKR 536
Query: 312 NCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSK--PLPPPLY-PTRSNPGGGGEP 368
+C ++ R+ +VERN T K + +LK+K PL PT NP GG E
Sbjct: 537 SC------NESRNTVVERNLQTPPPKQSHMVSTSLKAKCHPLQSTFASPTVCNPVGGNEK 590
Query: 369 CAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHID 428
CA+ I+I F KI KLAA+RI + ER+Q +Q E VY + K+ L Q+T+LFFN HID
Sbjct: 591 CADVTIHIFFSKILKLAAIRIRNLCERVQCVEQT-ERVYNVF-KQILEQQTTLFFNRHID 648
Query: 429 QIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------DHVDII 476
Q+ILCC YGVAK+ QL LTF+EI+ NY ++ QCKP+VF S++ HV II
Sbjct: 649 QLILCCLYGVAKVCQLELTFREILNNYKREAQCKPEVFSSIYIGSTNRNGVLVSRHVGII 708
Query: 477 TFYNKIFAPTVKPLLVELGPVGT--AMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHS 534
TFYN++F P KP LV L GT K N ++ + S FP LPDMSPKKVSA+H+
Sbjct: 709 TFYNEVFVPAAKPFLVSLISSGTHPEDKKNASGQIPGSPKPSPFPNLPDMSPKKVSASHN 768
Query: 535 VYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSN-RRVRGALNF 592
VYVSPLR +++D L+S SS+S+YAC+GE THAY SP KDL IN RLN N R+V LNF
Sbjct: 769 VYVSPLRQTKLDLLLSPSSRSFYACIGEGTHAYQSPSKDLAAINSRLNYNGRKVNSRLNF 828
Query: 593 DDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKP 628
D +VSDS+V SL NG + + A P
Sbjct: 829 D-------MVSDSVVAGSLGQINGGSTSDPAAAFSP 857
>gi|357152101|ref|XP_003576010.1| PREDICTED: retinoblastoma-related protein 2-like [Brachypodium
distachyon]
Length = 878
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 309/682 (45%), Positives = 386/682 (56%), Gaps = 139/682 (20%)
Query: 16 KRKFDSLASPVKTI-------TSPLSPHHSSTSK-MVVTPVSTAMTTAKWLRTIICP--- 64
K F++L SP KTI TSP SP + + K M +TPV++AMTT+KWLR +I
Sbjct: 249 KHVFETLVSPTKTIKNMLTVPTSPSSPVNGGSVKIMQMTPVTSAMTTSKWLREVISSSPE 308
Query: 65 --------------------------------LPSKPSADLQG------ANLMDNIWAEQ 86
P++ S D G AN D WAE
Sbjct: 309 KPSSKLEQFLSSCNRDLTSDITKRVNIVLEAIFPTRSSGDWGGSIGLNCANAFDIPWAEA 368
Query: 87 RRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTML 141
R+ EA KL Y+VLE +C AE+ + NLT L FHRC++ACSAELVLATHKTV M+
Sbjct: 369 RKSEASKLYYRVLEAICRAESHNTNVNNLTPLLSNERFHRCLIACSAELVLATHKTVIMM 428
Query: 142 FLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
F AVLE G+TAF+LSK+I++F+RHEESLPREL+RHLN+LEE+LLESM WEKGSS+YNSL
Sbjct: 429 FPAVLESTGLTAFDLSKIIENFVRHEESLPRELKRHLNALEEQLLESMAWEKGSSLYNSL 488
Query: 202 TVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEPFTE 260
VARP+L++EIN LG
Sbjct: 489 VVARPSLASEINRLGL-------------------------------------------- 504
Query: 261 VDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELVTD 320
L PMPSLD I H N S GL P K P + C
Sbjct: 505 -----LAEPMPSLDDIVAHQNIHSEGL-PATPSKKRAAGPDDNDDPQSPKRLC------K 552
Query: 321 DYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-PTRSNPGGGGEPCAETGINICFC 379
+ R+ L + N T K + K PL PT SNP GG E CAE G+NI F
Sbjct: 553 ESRNTLADHNLLTPPPKQS--HMVKAKWHPLQSTFASPTVSNPVGGNEKCAEVGVNIFFS 610
Query: 380 KINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVA 439
KI KLAA+RI + ERL+ +Q E VY + K+ L+Q+T+LFFN HIDQ+ILCC YGVA
Sbjct: 611 KILKLAAIRIRNLCERLRHVEQT-ERVYNIF-KQILDQQTTLFFNRHIDQLILCCLYGVA 668
Query: 440 KISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------DHVDIITFYNKIFAPTV 487
K+SQL LTFKEI+ NY ++ QCKP+VFRSVF HVDII FYN++F P V
Sbjct: 669 KVSQLTLTFKEIVTNYKREQQCKPEVFRSVFVGSTNRNGGLGSRHVDIIVFYNEVFVPAV 728
Query: 488 KPLLVELGPVGTAM--KTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRTSEM 545
KP LV+L P G K N S++ + S F LPDMSPKKVS++H+VYVSPLR ++
Sbjct: 729 KPFLVDLIPSGARAEDKKNPSSQIPGSPKPSPFSNLPDMSPKKVSSSHNVYVSPLRQTKK 788
Query: 546 DALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLN-SNRRVRGALNFDDVDVDVGLVS 603
DAL+S SS+S+YAC+GESTHA+ SP KDL IN+RLN ++RR+ +NFD +VS
Sbjct: 789 DALLSPSSRSFYACIGESTHAFQSPSKDLAAINNRLNYTSRRINTRINFD-------MVS 841
Query: 604 DSMVVNSLYLQNGSAAASTCAV 625
DS+V SL NG A+S A
Sbjct: 842 DSVVAGSLGQPNGGPASSDPAA 863
>gi|242086597|ref|XP_002439131.1| hypothetical protein SORBIDRAFT_09g001110 [Sorghum bicolor]
gi|241944416|gb|EES17561.1| hypothetical protein SORBIDRAFT_09g001110 [Sorghum bicolor]
Length = 870
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 302/692 (43%), Positives = 391/692 (56%), Gaps = 141/692 (20%)
Query: 4 SLFGGAVNITGAKRKFDSLASPVKTI-------TSPLSPHHSSTSKMV-VTPVSTAMTTA 55
+L G + N+ +K F+ LASP KTI +SPLSP S + K+V +TPV++AMTTA
Sbjct: 225 NLSGDSTNLGHSKHVFEILASPTKTIKNMLTVPSSPLSPATSGSVKIVQMTPVTSAMTTA 284
Query: 56 KWLRTIICPLPSKPSADLQG---------------------------------------- 75
KWLR +I LP KPS+ LQ
Sbjct: 285 KWLREVISSLPEKPSSKLQQLLSSCDRDLTNAVTERVSIVLEAIFPTKSSADGGGSLGLN 344
Query: 76 -ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
AN+ D WAE R++EA KL Y+VLE +C AE Q + NLT L FHRC++ACSAE
Sbjct: 345 CANVFDIPWAEARKMEASKLYYRVLEAICRAELQNSNVNNLTPLLLNERFHRCLIACSAE 404
Query: 130 LVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESM 189
LVLATHK V M+F AVLE G+TAF+LSK+I++F+RHEE+LPR+L+RHLNSLEE+LLESM
Sbjct: 405 LVLATHKPVFMMFPAVLESTGLTAFDLSKIIENFVRHEETLPRQLKRHLNSLEEQLLESM 464
Query: 190 VWEKGSSMYNSLTVARPALSAEI-NLGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHY 248
VWEKGSS+YNSL VARP++++EI +LG
Sbjct: 465 VWEKGSSLYNSLIVARPSIASEIKHLGL-------------------------------- 492
Query: 249 ENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQ 308
L PMPSLD + N GL P K + P +
Sbjct: 493 -----------------LAEPMPSLDDLVARQNIHVEGL-PATPSKKRDAGPDDNADPRS 534
Query: 309 FYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSK--PLPPPLY-PTRSNPGGG 365
+C ++ R+ +VE N T K ++ +LK+K PL PT SNP GG
Sbjct: 535 PKRSC------NESRNTVVEHNLLTPPPKHHMVS-TSLKAKCHPLESTFASPTVSNPVGG 587
Query: 366 GEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNC 425
E CA+ I I F KI KLAAVRI + ER+Q ++ E VY + + L+Q+T+LFFN
Sbjct: 588 NEKCADVAIQIFFSKILKLAAVRIRNLCERVQ-HVELTERVYNVF-NQILDQQTTLFFNR 645
Query: 426 HIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------DHV 473
HIDQ+ILCC YGVAK ++ L+FKE++ Y K+ QCKP+VF++++ HV
Sbjct: 646 HIDQLILCCLYGVAKACKVELSFKELLNYYRKEAQCKPEVFQNIYIGSRNSNDVLVSRHV 705
Query: 474 DIITFYNKIFAPTVKPLLVELGPVGTAM--KTNRDSEVNHNNDASVFPA-LPDMSPKKVS 530
II+FYN +F P KP LV L GT K N + + S P LPDMSPKKVS
Sbjct: 706 SIISFYNAVFVPAAKPFLVSLISSGTCPEDKKNASGPIPGSPKPSPLPNNLPDMSPKKVS 765
Query: 531 ATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLN-SNRRVRG 588
A+H+VYVSPLR ++MDAL+S SS+S+YAC+GE THAY SP KDL IN RLN S RR+
Sbjct: 766 ASHNVYVSPLRQTKMDALLSPSSRSFYACIGEGTHAYQSPSKDLAAINSRLNYSGRRINS 825
Query: 589 ALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAA 620
LNFD +VSDS+V SL NG + +
Sbjct: 826 RLNFD-------MVSDSVVAGSLGQPNGGSTS 850
>gi|413925018|gb|AFW64950.1| retinoblastoma protein 2 [Zea mays]
Length = 866
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 294/686 (42%), Positives = 381/686 (55%), Gaps = 139/686 (20%)
Query: 9 AVNITGAKRKFDSLASPVKTI-------TSPLSPHHSSTSKMV-VTPVSTAMTTAKWLRT 60
+ N+ +K F++LASP KTI +SPLSP + + K+V +TP+++AMTTAKWLR
Sbjct: 229 STNLGCSKCAFETLASPTKTIKNMLTVPSSPLSPTNGGSVKIVQMTPITSAMTTAKWLRE 288
Query: 61 IICPLPSKPSADLQG-----------------------------------------ANLM 79
+I LP KPS+ LQ AN
Sbjct: 289 VISSLPEKPSSKLQQLMSSCDRDLTNAVTERVSIVLEAIFPTKSSADRGGSLGLNCANAF 348
Query: 80 DNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLAT 134
D +WA+ R++EA KL Y+VLE +C AE Q + NLT L FHRC++ACSAELVLAT
Sbjct: 349 DTLWADARKMEASKLYYRVLEAICRAELQNSNVNNLTPLLSNERFHRCLIACSAELVLAT 408
Query: 135 HKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKG 194
HKTV M+F AVLE G+T+F+LSK+I++F+RHEE+LPREL+RHLNSLEE++LESM
Sbjct: 409 HKTVIMMFPAVLESTGLTSFDLSKIIENFVRHEETLPRELKRHLNSLEEQILESM----- 463
Query: 195 SSMYNSLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWW 254
+WE+ +S+ P+
Sbjct: 464 --------------------------------AWEKGSSLYNSLIVARPSVA-------- 483
Query: 255 KEPFTEVDSIFLLIP-MPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANC 313
+E++ LL MPSLD + N GL P K + C
Sbjct: 484 ----SEINRFGLLAESMPSLDDLVARQNIHIEGL-PATPSKKRAAGRDDNADPRSPKRPC 538
Query: 314 YGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSK--PLPPPLY-PTRSNPGGGGEPCA 370
++ RS +VE N T K C + L +LK+K PL PT SNP GG E CA
Sbjct: 539 ------NESRSTVVEHNLQTPPPKQCHMVLTSLKAKCHPLQSTFASPTVSNPVGGNEKCA 592
Query: 371 ETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQI 430
+ I I F KI KLAA+RI + ER+Q +Q E VY + K+ L+Q+T+LFFN HIDQ+
Sbjct: 593 DVTIQIFFSKILKLAAIRIRNLCERIQYMEQT-ERVYNVF-KQILDQQTTLFFNRHIDQL 650
Query: 431 ILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------DHVDIITF 478
ILCC YGVAK+ QL L+F+EI+ NY K+ QCKP+VF S++ HVDIITF
Sbjct: 651 ILCCLYGVAKVCQLELSFREILNNYKKEAQCKPEVFLSIYIGSRNHNGVLISRHVDIITF 710
Query: 479 YNKIFAPTVKPLLVELGPVGT--AMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVY 536
YN++F P KP LV L GT K N +V + S FP LPDMSPKKVSA+H+VY
Sbjct: 711 YNEVFVPAAKPFLVSLISSGTRPEDKKNASGQVPGSPKLSPFPNLPDMSPKKVSASHNVY 770
Query: 537 VSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSN-RRVRGALNFDD 594
VSPLR ++MD L+S SS+S+YAC+GE THAY SP KDL IN RLN N RRV LNFD
Sbjct: 771 VSPLRQTKMDLLLSPSSRSFYACIGEGTHAYQSPSKDLAAINSRLNYNGRRVNSRLNFD- 829
Query: 595 VDVDVGLVSDSMVVNSLYLQNGSAAA 620
+VSDS+V SL NG + +
Sbjct: 830 ------MVSDSVVAGSLGQPNGGSTS 849
>gi|75244560|sp|Q8H0J6.1|RBR2_MAIZE RecName: Full=Retinoblastoma-related protein 2; Short=ZmRBR2
gi|24561941|emb|CAC82493.1| retinoblastoma-related protein [Zea mays]
Length = 866
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 292/686 (42%), Positives = 381/686 (55%), Gaps = 139/686 (20%)
Query: 9 AVNITGAKRKFDSLASPVKTI-------TSPLSPHHSSTSKMV-VTPVSTAMTTAKWLRT 60
+ N+ +K F++LASP KTI +SPLSP + + K+V +TP+++AMTTAKWLR
Sbjct: 229 STNLGCSKCAFETLASPRKTIKNMLTVPSSPLSPTNGCSVKIVQMTPITSAMTTAKWLRE 288
Query: 61 IICPLPSKPSADLQG-----------------------------------------ANLM 79
+I LP KPS+ LQ AN
Sbjct: 289 VISSLPEKPSSKLQQLMSSCDRDLTYAVTERVSIVLEAIFPTKSSADRGGSLGLNCANAF 348
Query: 80 DNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLAT 134
D +WA+ R++EA KL Y+VLE +C AE Q + NLT L FHRC++ACSA++VLAT
Sbjct: 349 DTLWADARKMEASKLYYRVLEAICRAELQNSNVNNLTPLLSNERFHRCLIACSADVVLAT 408
Query: 135 HKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKG 194
HKTV M+F AVLE G+T+F+LSK+I++F+RHEE+LPREL+RHLNSLEE++LESM
Sbjct: 409 HKTVIMMFPAVLESAGLTSFDLSKIIENFVRHEETLPRELKRHLNSLEEQILESM----- 463
Query: 195 SSMYNSLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWW 254
+WE+ +S+ P+
Sbjct: 464 --------------------------------AWEKGSSLYNSLIVARPSVA-------- 483
Query: 255 KEPFTEVDSIFLLIP-MPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANC 313
+E++ LL MPSLD + N GL P K + C
Sbjct: 484 ----SEINRFGLLAESMPSLDDLVARQNIHIEGL-PATPSKKRAAGRDDNADPRSPKRPC 538
Query: 314 YGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSK--PLPPPLY-PTRSNPGGGGEPCA 370
++ RS +VE N T K C + L +LK+K PL PT SNP GG E CA
Sbjct: 539 ------NESRSPVVEHNLQTPPPKQCHMVLTSLKAKCHPLQSTFASPTVSNPVGGNEKCA 592
Query: 371 ETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQI 430
+ I I F KI KLAA+RI + ER+Q +Q E VY + K+ L+Q+T+LFFN HIDQ+
Sbjct: 593 DVTIQIFFSKILKLAAIRIRNLCERIQYMEQT-ERVYNVF-KQILDQQTTLFFNRHIDQL 650
Query: 431 ILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------DHVDIITF 478
ILCC YGVAK+ QL L+F+EI+ NY K+ QCKP+VF S++ HVDIITF
Sbjct: 651 ILCCLYGVAKVCQLELSFREILNNYKKEAQCKPEVFLSIYIGSRNHNGVLISRHVDIITF 710
Query: 479 YNKIFAPTVKPLLVELGPVGT--AMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVY 536
YN++F P KP LV L GT K N +V + S FP LPDMSPKKVSA+H+VY
Sbjct: 711 YNEVFVPAAKPFLVSLISSGTRPEDKKNASGQVPGSPKLSPFPNLPDMSPKKVSASHNVY 770
Query: 537 VSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSN-RRVRGALNFDD 594
VSPLR ++MD L+S SS+S+YAC+GE THAY SP KDL IN RLN N RRV LNFD
Sbjct: 771 VSPLRQTKMDLLLSPSSRSFYACIGEGTHAYQSPSKDLAAINSRLNYNGRRVNSRLNFD- 829
Query: 595 VDVDVGLVSDSMVVNSLYLQNGSAAA 620
+VSDS+V SL NG + +
Sbjct: 830 ------MVSDSVVAGSLGQPNGGSTS 849
>gi|18426918|gb|AAA98478.2| retinoblastoma-like protein [Zea mays]
Length = 527
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 270/581 (46%), Positives = 343/581 (59%), Gaps = 88/581 (15%)
Query: 72 DLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLAC 126
DL AN D WAE R++EA KL Y+VLE +C AE Q + NLT L FHRC++AC
Sbjct: 2 DLNCANAFDIPWAEARKVEASKLYYRVLEAICRAELQNSNVNNLTPLLSNERFHRCLIAC 61
Query: 127 SAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLL 186
SA+LVLATHKTV M+F AVLE G+TAF+LSK+I++F+RHEE+LPREL+RHLNSLEE+LL
Sbjct: 62 SADLVLATHKTVIMMFPAVLESTGLTAFDLSKIIENFVRHEETLPRELKRHLNSLEEQLL 121
Query: 187 ESMVWEKGSSMYNSLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQ 246
ESM WEKGSS+YNSL VARP++++EIN
Sbjct: 122 ESMAWEKGSSLYNSLIVARPSVASEIN--------------------------------- 148
Query: 247 HYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFN 306
L +W EP MPSLD + N GL P K P +
Sbjct: 149 ---RLVFWLEP------------MPSLDDLVSRQNVRIEGL-PATPSKKRAAGPDDNSDP 192
Query: 307 FQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSK--PLPPPLY-PTRSNPG 363
+C +++R+ +VERN T K + +LK+K PL PT NP
Sbjct: 193 RSPKRSC------NEFRNTVVERNLQTPPPKQSHMVSTSLKAKCHPLQSTFASPTVCNPV 246
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
GG E CA+ I+I F KI K A+RI + ER+Q +Q E VY + K+ L Q+T+LFF
Sbjct: 247 GGNEKCADVTIHIFFSKILKFPAIRIRNLCERVQCVEQT-ERVYNVF-KQILEQQTTLFF 304
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------D 471
N HIDQ+ILCC YGVAK+ QL LTF+EI+ NY ++ QCKP+VF S++
Sbjct: 305 NRHIDQLILCCLYGVAKVCQLELTFREILNNYKREAQCKPEVFSSIYIGSTNRNGVLVSR 364
Query: 472 HVDIITFYNKIFAPTVKPLLVELGPVGT--AMKTNRDSEVNHNNDASVFPALPDMSPKKV 529
HV IITFYN++F P KP LV L GT K N ++ + S FP LPDMSPKKV
Sbjct: 365 HVGIITFYNEVFVPAAKPFLVSLISSGTHPEDKKNASGQIPGSPKPSPFPNLPDMSPKKV 424
Query: 530 SATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSN-RRVR 587
SA+H+VYVSPLR +++D L+S SS+S+YAC+GE THAY SP KDL IN RLN N R+V
Sbjct: 425 SASHNVYVSPLRQTKLDLLLSPSSRSFYACIGEGTHAYQSPSKDLAAINSRLNYNGRKVN 484
Query: 588 GALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKP 628
LNFD +VSDS+V SL NG + + A P
Sbjct: 485 SRLNFD-------MVSDSVVAGSLGQINGGSTSDPAAAFSP 518
>gi|413925017|gb|AFW64949.1| hypothetical protein ZEAMMB73_472172 [Zea mays]
Length = 839
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 284/661 (42%), Positives = 366/661 (55%), Gaps = 132/661 (19%)
Query: 9 AVNITGAKRKFDSLASPVKTI-------TSPLSPHHSSTSKMV-VTPVSTAMTTAKWLRT 60
+ N+ +K F++LASP KTI +SPLSP + + K+V +TP+++AMTTAKWLR
Sbjct: 229 STNLGCSKCAFETLASPTKTIKNMLTVPSSPLSPTNGGSVKIVQMTPITSAMTTAKWLRE 288
Query: 61 IICPLPSKPSADLQG-----------------------------------------ANLM 79
+I LP KPS+ LQ AN
Sbjct: 289 VISSLPEKPSSKLQQLMSSCDRDLTNAVTERVSIVLEAIFPTKSSADRGGSLGLNCANAF 348
Query: 80 DNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLAT 134
D +WA+ R++EA KL Y+VLE +C AE Q + NLT L FHRC++ACSAELVLAT
Sbjct: 349 DTLWADARKMEASKLYYRVLEAICRAELQNSNVNNLTPLLSNERFHRCLIACSAELVLAT 408
Query: 135 HKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKG 194
HKTV M+F AVLE G+T+F+LSK+I++F+RHEE+LPREL+RHLNS LE + E
Sbjct: 409 HKTVIMMFPAVLESTGLTSFDLSKIIENFVRHEETLPRELKRHLNS-----LEEQILE-- 461
Query: 195 SSMYNSLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWW 254
SM +WE+ +S+ P+
Sbjct: 462 -SM-----------------------------AWEKGSSLYNSLIVARPSVA-------- 483
Query: 255 KEPFTEVDSIFLLIP-MPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANC 313
+E++ LL MPSLD + N GL P K + C
Sbjct: 484 ----SEINRFGLLAESMPSLDDLVARQNIHIEGL-PATPSKKRAAGRDDNADPRSPKRPC 538
Query: 314 YGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSK--PLPPPLY-PTRSNPGGGGEPCA 370
++ RS +VE N T K C + L +LK+K PL PT SNP GG E CA
Sbjct: 539 ------NESRSTVVEHNLQTPPPKQCHMVLTSLKAKCHPLQSTFASPTVSNPVGGNEKCA 592
Query: 371 ETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQI 430
+ I I F KI KLAA+RI + ER+Q +Q E VY + K+ L+Q+T+LFFN HIDQ+
Sbjct: 593 DVTIQIFFSKILKLAAIRIRNLCERIQYMEQT-ERVYNVF-KQILDQQTTLFFNRHIDQL 650
Query: 431 ILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------DHVDIITF 478
ILCC YGVAK+ QL L+F+EI+ NY K+ QCKP+VF S++ HVDIITF
Sbjct: 651 ILCCLYGVAKVCQLELSFREILNNYKKEAQCKPEVFLSIYIGSRNHNGVLISRHVDIITF 710
Query: 479 YNKIFAPTVKPLLVELGPVGT--AMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVY 536
YN++F P KP LV L GT K N +V + S FP LPDMSPKKVSA+H+VY
Sbjct: 711 YNEVFVPAAKPFLVSLISSGTRPEDKKNASGQVPGSPKLSPFPNLPDMSPKKVSASHNVY 770
Query: 537 VSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSN-RRVRGALNFDD 594
VSPLR ++MD L+S SS+S+YAC+GE THAY SP KDL IN RLN N RRV LNFD
Sbjct: 771 VSPLRQTKMDLLLSPSSRSFYACIGEGTHAYQSPSKDLAAINSRLNYNGRRVNSRLNFDM 830
Query: 595 V 595
V
Sbjct: 831 V 831
>gi|225451657|ref|XP_002276265.1| PREDICTED: retinoblastoma-related protein-like [Vitis vinifera]
Length = 683
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 289/674 (42%), Positives = 357/674 (52%), Gaps = 156/674 (23%)
Query: 7 GGAVNITGAKRKFDSLASPVKTITSPLSPHHSSTSKMVVTPVSTAMTTAKWLRTIICPLP 66
G +NI G KRKF+++ SP T TS LSP T A+WL+T+IC LP
Sbjct: 93 GDTMNICGYKRKFEAIVSPADT-TSQLSP----------------CTPAQWLQTVICSLP 135
Query: 67 SKPSADLQ----------------------------GAN-------------LMDNIWAE 85
+KPSA+L+ G N LM++ W E
Sbjct: 136 AKPSAELERFMSSCDGNVTDKVICRASIILAAIFPRGCNGNRCMSSGLHNSSLMNSGWIE 195
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTM 140
QR+ EALKL YKVLE++C +EAQ L +NLT L FHRCMLACSAELV A H V M
Sbjct: 196 QRQEEALKLYYKVLESICESEAQKLQGRNLTQLLTNERFHRCMLACSAELVSAAHMGVRM 255
Query: 141 LFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNS 200
LF VLERIGITAF+LS+V +SFI+HE SLPREL+R+LNS+EE++LESMVW KGSS+YNS
Sbjct: 256 LFPRVLERIGITAFDLSRVTESFIKHEGSLPRELKRYLNSMEEQMLESMVWGKGSSLYNS 315
Query: 201 LTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEPFT 259
L VARP+L+ EI LG
Sbjct: 316 LIVARPSLAEEIRRLGL------------------------------------------- 332
Query: 260 EVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELVT 319
L PMPSLDAIA S GGL P N + EL
Sbjct: 333 ------LAKPMPSLDAIAADNLLSYGGL----------PHPPGQNGNARSSEKVSSEL-- 374
Query: 320 DDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLYPTRSNPGGGGEPCAETGINICFC 379
+ S + + + D L PT+ NPGG G C +TGI + F
Sbjct: 375 --HNSSALPMKEHSPALNDQKPRKPPPSPPLLSAFASPTQPNPGGRGSTCLDTGIKLLFE 432
Query: 380 KINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVA 439
K+ KLAAVRIN + RL+ Q IRE VY L R LNQ+T+L FN H+DQIILCCFY +
Sbjct: 433 KVAKLAAVRINHLTLRLKPLQPIREIVYGLF-HRILNQKTALCFNRHVDQIILCCFYIIV 491
Query: 440 KISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DHVDIITFYNKIFAP 485
K S+L LTFKEI +Y KQPQ PQV VF DH+DI+ FYN+IF
Sbjct: 492 KDSKLELTFKEIKDSYVKQPQHGPQVVSHVFVNRSPAHGNGKNREDHIDIVAFYNEIFLW 551
Query: 486 TVKPLLVELGPVGTAMKT------NRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSP 539
VKPLLVE+ P + + N D E + S FP++PD+SPKKVS +H+VY+S
Sbjct: 552 AVKPLLVEVRPAKVSDQAPDEAANNADDECPGSPRISPFPSIPDLSPKKVSPSHNVYLSS 611
Query: 540 LRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNRRVRGALNFDDVDVD 598
L+ S+ +ALIS +KSYYAC GEST AY SP KDLT IN+ L S ++R L D
Sbjct: 612 LQPSKKEALISRGAKSYYACFGESTRAYQSPSKDLTTINNCLRSRPKLRRRL-------D 664
Query: 599 VGLVSDSMVVNSLY 612
V VS S V +L+
Sbjct: 665 VEFVSHSEVARALF 678
>gi|2352799|gb|AAB69651.1| retinoblastoma-related protein 2b [Zea mays]
Length = 584
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 274/633 (43%), Positives = 353/633 (55%), Gaps = 125/633 (19%)
Query: 30 TSPLSPHHSSTSKMV-VTPVSTAMTTAKWLRTIICPLPSKPSADLQG------------- 75
+SPLSP + + K+V +TP+++AMTTAKWLR +I LP KPS+ LQ
Sbjct: 2 SSPLSPTNGGSVKIVQMTPITSAMTTAKWLREVISSLPEKPSSKLQQLMSSCDRDLTNAV 61
Query: 76 ----------------------------ANLMDNIWAEQRRLEALKLNYKVLETMCTAEA 107
AN D +WA+ R++EA KL Y+VLE +C AE
Sbjct: 62 TERVSIVLEAIFPTKSSADRGGSLGLNCANAFDTLWADARKMEASKLYYRVLEAICRAEL 121
Query: 108 QVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQS 162
Q + NLT L FHRC++ACSAELVLATHKTV M+F AVLE G+T+F+LSK+I++
Sbjct: 122 QNSNVNNLTPLLSNERFHRCLIACSAELVLATHKTVIMMFPAVLESTGLTSFDLSKIIEN 181
Query: 163 FIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPALSAEINLGFTDILFQ 222
F+RHEE+LPREL+RHLNSLEE++LESM
Sbjct: 182 FVRHEETLPRELKRHLNSLEEQILESM--------------------------------- 208
Query: 223 DSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEPFTEVDSIFLLIP-MPSLDAIAMHIN 281
+WE+ +S+ P+ +E++ LL MPSLD + N
Sbjct: 209 ----AWEKGSSLYNSLIVARPSVA------------SEINRFGLLAESMPSLDDLVARQN 252
Query: 282 FSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLL 341
GL P K + C ++ RS +VE N T K C +
Sbjct: 253 IHIEGL-PATPSKKRAAGRDDNADPRSPKRPC------NESRSTVVEHNLQTPPPKQCHM 305
Query: 342 GLNNLKSK--PLPPPLY-PTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQL 398
L +LK+K PL PT SNP GG E CA+ I I F KI KLAA+RI + ER+Q
Sbjct: 306 VLTSLKAKCHPLQSTFASPTVSNPVGGNEKCADVTIQIFFSKILKLAAIRIRNLCERIQY 365
Query: 399 SQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQ 458
+Q E VY + K+ L+Q+T+LFFN H+ Q+ILCC YGVAK+ QL L+F+EI+ NY K+
Sbjct: 366 MEQT-ERVYNVF-KQILDQQTTLFFNRHMHQLILCCLYGVAKVCQLELSFREILNNYKKE 423
Query: 459 PQCKPQVFRSVF------------DHVDIITFYNKIFAPTVKPLLVELGPVGT--AMKTN 504
QCKP+VF S++ HVDIITFYN++F P KP LV L GT K N
Sbjct: 424 AQCKPEVFLSIYIGSRNHNGVLISRHVDIITFYNEVFVPAAKPFLVSLISSGTRPEDKKN 483
Query: 505 RDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGEST 564
+V + S FP LPDMSPKKVSA+H+VYVSPLR ++MD L+S SS+S+YAC+GE T
Sbjct: 484 ASGQVPGSPKLSPFPNLPDMSPKKVSASHNVYVSPLRQTKMDLLLSPSSRSFYACIGEGT 543
Query: 565 HAY-SPFKDLTDINHRLNSN-RRVRGALNFDDV 595
HAY SP KDL IN RLN N RRV LNFD V
Sbjct: 544 HAYQSPSKDLAAINSRLNYNGRRVNSRLNFDMV 576
>gi|296082246|emb|CBI21251.3| unnamed protein product [Vitis vinifera]
Length = 588
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 288/671 (42%), Positives = 356/671 (53%), Gaps = 156/671 (23%)
Query: 10 VNITGAKRKFDSLASPVKTITSPLSPHHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKP 69
+NI G KRKF+++ SP T TS LSP T A+WL+T+IC LP+KP
Sbjct: 1 MNICGYKRKFEAIVSPADT-TSQLSP----------------CTPAQWLQTVICSLPAKP 43
Query: 70 SADLQ----------------------------GAN-------------LMDNIWAEQRR 88
SA+L+ G N LM++ W EQR+
Sbjct: 44 SAELERFMSSCDGNVTDKVICRASIILAAIFPRGCNGNRCMSSGLHNSSLMNSGWIEQRQ 103
Query: 89 LEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFL 143
EALKL YKVLE++C +EAQ L +NLT L FHRCMLACSAELV A H V MLF
Sbjct: 104 EEALKLYYKVLESICESEAQKLQGRNLTQLLTNERFHRCMLACSAELVSAAHMGVRMLFP 163
Query: 144 AVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTV 203
VLERIGITAF+LS+V +SFI+HE SLPREL+R+LNS+EE++LESMVW KGSS+YNSL V
Sbjct: 164 RVLERIGITAFDLSRVTESFIKHEGSLPRELKRYLNSMEEQMLESMVWGKGSSLYNSLIV 223
Query: 204 ARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEPFTEVD 262
ARP+L+ EI LG
Sbjct: 224 ARPSLAEEIRRLGL---------------------------------------------- 237
Query: 263 SIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELVTDDY 322
L PMPSLDAIA S GGL P N + EL +
Sbjct: 238 ---LAKPMPSLDAIAADNLLSYGGL----------PHPPGQNGNARSSEKVSSEL----H 280
Query: 323 RSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLYPTRSNPGGGGEPCAETGINICFCKIN 382
S + + + D L PT+ NPGG G C +TGI + F K+
Sbjct: 281 NSSALPMKEHSPALNDQKPRKPPPSPPLLSAFASPTQPNPGGRGSTCLDTGIKLLFEKVA 340
Query: 383 KLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKIS 442
KLAAVRIN + RL+ Q IRE VY L R LNQ+T+L FN H+DQIILCCFY + K S
Sbjct: 341 KLAAVRINHLTLRLKPLQPIREIVYGLF-HRILNQKTALCFNRHVDQIILCCFYIIVKDS 399
Query: 443 QLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DHVDIITFYNKIFAPTVK 488
+L LTFKEI +Y KQPQ PQV VF DH+DI+ FYN+IF VK
Sbjct: 400 KLELTFKEIKDSYVKQPQHGPQVVSHVFVNRSPAHGNGKNREDHIDIVAFYNEIFLWAVK 459
Query: 489 PLLVELGPVGTAMKT------NRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRT 542
PLLVE+ P + + N D E + S FP++PD+SPKKVS +H+VY+S L+
Sbjct: 460 PLLVEVRPAKVSDQAPDEAANNADDECPGSPRISPFPSIPDLSPKKVSPSHNVYLSSLQP 519
Query: 543 SEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNRRVRGALNFDDVDVDVGL 601
S+ +ALIS +KSYYAC GEST AY SP KDLT IN+ L S ++R L DV
Sbjct: 520 SKKEALISRGAKSYYACFGESTRAYQSPSKDLTTINNCLRSRPKLRRRL-------DVEF 572
Query: 602 VSDSMVVNSLY 612
VS S V +L+
Sbjct: 573 VSHSEVARALF 583
>gi|255543487|ref|XP_002512806.1| conserved hypothetical protein [Ricinus communis]
gi|223547817|gb|EEF49309.1| conserved hypothetical protein [Ricinus communis]
Length = 612
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 276/677 (40%), Positives = 368/677 (54%), Gaps = 146/677 (21%)
Query: 8 GAVNITGAKRK-----FDSLASPVKTITSPLSPHHSSTSKMVVTPVSTAMTTAKWLRTII 62
G +I KRK F A PV + SP S H + S +V A T KWL T+I
Sbjct: 19 GTTDIKAVKRKIGETEFTEAAFPV--LHSPAS-HATGRSVLV-----GAQVTRKWLETVI 70
Query: 63 CPLPSKPSADL-------------------------------------QGANLMDNIWAE 85
PLPSKPSA+L Q NLM+++W+E
Sbjct: 71 SPLPSKPSAELERMLGIHDDKSILDEVMTRANVVLSALFPKRQTVSSLQDVNLMESMWSE 130
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLH-AKNLTSL-----FHRCMLACSAELVLATHKTVT 139
QRR EALKL Y+VLE++C +EA + + +L+ L FHRC+LACSAELV A
Sbjct: 131 QRRSEALKLYYRVLESVCQSEAGKSNTSDHLSGLLSNERFHRCLLACSAELVSAAQTGTG 190
Query: 140 MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 199
ML + ER G+TAF+LSKVI+SFI HE +LPRELRRHLNS+EE+LLE VWEKGSS+YN
Sbjct: 191 MLLSVIFERTGVTAFDLSKVIESFIIHEPTLPRELRRHLNSMEEQLLERRVWEKGSSLYN 250
Query: 200 SLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEPFT 259
SL VARPALS
Sbjct: 251 SLVVARPALS-------------------------------------------------D 261
Query: 260 EVDSIFLLI-PMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELV 318
E++S+ LL PMPSL+ ++ GGL L KH+ S Q +
Sbjct: 262 EINSLQLLAQPMPSLETVSPTY---FGGLLCSTILQKHKLSQA------QDRGTISPKRP 312
Query: 319 TDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPP-PLYPTRSNPGGGGEPCAETGINIC 377
++ V+++ N+ DC + ++K P P ++ P C++T IN+
Sbjct: 313 CTEHADVVLKHNSTYCPKTDCPTAFSTPQTKQTPASPSSSLQNIPT-----CSDTAINVL 367
Query: 378 FCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYG 437
F K+ KL A+R ++ ERL+LS+Q RE VY L ++ LNQRT+LFFN H+DQI+LCCFYG
Sbjct: 368 FSKMAKLGAIRTQSIAERLKLSKQFREKVYFLF-QQILNQRTTLFFNRHMDQIVLCCFYG 426
Query: 438 VAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV--------FDHVDIITFYNKIFAPTVKP 489
+AK+S +NLTFK+I NY KQPQC+ Q+F SV + ++ITFYN+IF P+VK
Sbjct: 427 LAKMSGVNLTFKQIYDNYMKQPQCRSQIFWSVSGNHERNGGQYAEMITFYNRIFLPSVKS 486
Query: 490 LLVELG----PVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRTSEM 545
L E+ P N D S FP+LPD+SPKKVS +H+VY+SP+R S+
Sbjct: 487 FLEEIHHREPPTQVPDIKNID---------SAFPSLPDISPKKVSPSHNVYLSPVRLSKQ 537
Query: 546 DALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNRRVRGALNFDDVDVDVGLVSD 604
D L S+ +KSYYA VGES + Y +P K L+DIN RLN ++V+ LNFD+ V V +SD
Sbjct: 538 DDLNSNMTKSYYAFVGESIYPYETPSKQLSDINERLNRTKKVKRRLNFDNEGVAV--ISD 595
Query: 605 SMVVNSLYLQNGSAAAS 621
+V+NSL+ QN S
Sbjct: 596 DVVLNSLFPQNNKCGTS 612
>gi|302805037|ref|XP_002984270.1| hypothetical protein SELMODRAFT_180795 [Selaginella moellendorffii]
gi|300148119|gb|EFJ14780.1| hypothetical protein SELMODRAFT_180795 [Selaginella moellendorffii]
Length = 986
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 266/630 (42%), Positives = 341/630 (54%), Gaps = 117/630 (18%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADL-----------------QGANLMDNI------ 82
TPVS MTTAKWLRT+I PLPS+PS +L + +++ I
Sbjct: 378 TPVSVTMTTAKWLRTVIAPLPSEPSTELLEYLRSCDRDITEEVTHRAKVILEAIFPIYSP 437
Query: 83 --------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCM 123
WA QRR EA KL Y+VL +C AE+ L +KNLTS+ FHRCM
Sbjct: 438 GSWKATLHSSGSLEWAVQRRSEASKLYYRVLTALCHAESLRLQSKNLTSVLTSEKFHRCM 497
Query: 124 LACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEE 183
LACS ELVLATHKTV + F AVL GITAF++SKVI+SF+RHEE+LPREL+RHLNS+EE
Sbjct: 498 LACSGELVLATHKTVILSFPAVLGPTGITAFDMSKVIESFVRHEETLPRELKRHLNSIEE 557
Query: 184 RLLESMVWEKGSSMYNSLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSP 243
RLLESM WEKGSSMYNSL VARP EI L + S E +S D P
Sbjct: 558 RLLESMAWEKGSSMYNSLIVARPRFGDEIR---RLELMAEPMPSLETLSSRRESKGEDMP 614
Query: 244 TRQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCS 303
R EP + IP P + + F+SG S +
Sbjct: 615 DR----------EPLLSGEQTLTCIPSPVKERPSAFSAFNSG-------------SGKRN 651
Query: 304 IFNFQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLYPTRSNPG 363
+F+ Q + F +K L G S P + NP
Sbjct: 652 LFHLQ---------------------SVFARYMKGLLFGRCTDNSS-----FSPQKPNPH 685
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
GE CAE +N+ F K+ KLAA RI + ERL + E ++ + + LN RT++FF
Sbjct: 686 ASGETCAEAVMNVFFQKVLKLAASRIKVLCERLSQPSHVVEQIFQVF-EYALN-RTTIFF 743
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------DHVDI 475
N HIDQIILC YGV K+ +LN+TF++II+ Y KQPQ + VFR+V+ D DI
Sbjct: 744 NRHIDQIILCSMYGVCKVMKLNVTFRDIIFQYRKQPQSRNHVFRNVYLEQRRGRTDMGDI 803
Query: 476 ITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA----SVFPALPDMSPKKVSA 531
I FYN+I+ P K L+ + +M + + + + SVFPA+PDMSP+KVSA
Sbjct: 804 IKFYNEIYVPATKAFLMNIAARPASMVAGKGTATDEAPSSPPRPSVFPAIPDMSPRKVSA 863
Query: 532 THSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLN-SNRRVRGA 589
H+V+VSPLR ++++ ++S S+S YACVGESTHAY SP KDLT IN RLN SN R
Sbjct: 864 RHNVFVSPLRNTKVENIMSPHSRSLYACVGESTHAYQSPSKDLTVINCRLNLSNGR---R 920
Query: 590 LNFDDVDVDVGLVSDSMVVNSLYLQNGSAA 619
L F + L+SDS V +L N AA
Sbjct: 921 LEFQ----EPSLMSDSFVTGALSNTNTDAA 946
>gi|108864449|gb|ABA94066.2| retinoblastoma-related protein 1, putative, expressed [Oryza sativa
Japonica Group]
Length = 873
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 251/573 (43%), Positives = 321/573 (56%), Gaps = 132/573 (23%)
Query: 7 GGAVNITGAKRKFDSLASPVKTITSPLSP--------HHSSTSKMVVTPVSTAMTTAKWL 58
G + N +KR F++LASP KTI + L+ + S + +TPV++AMTTAKWL
Sbjct: 338 GSSANFGCSKRVFETLASPTKTIKNMLAAPSSPSSPANGGSIKIVQMTPVTSAMTTAKWL 397
Query: 59 RTIICPLPSKPSADLQG----------------------------------------ANL 78
R +I LP KPS+ L+ AN
Sbjct: 398 RDVISSLPDKPSSKLEEFLSSCDTDLTSDVVKRVSIILEAIFPTKSIDRGTSIGLNCANA 457
Query: 79 MDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLA 133
D WAE R++EA KL Y+VLE +C AE+Q + NLT L FHRC++ACSAELVLA
Sbjct: 458 FDIPWAEARKMEASKLYYRVLEAICRAESQNNNVNNLTPLLSNERFHRCLIACSAELVLA 517
Query: 134 THKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEK 193
THKTV M+F AVLE G+TAF+LSK+I++F+RHEE+LPREL+RHLNSLEE+LLESM WEK
Sbjct: 518 THKTVIMMFPAVLESTGLTAFDLSKIIENFVRHEETLPRELKRHLNSLEEQLLESMSWEK 577
Query: 194 GSSMYNSLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPW 253
GSS+YNSL VARP+LS
Sbjct: 578 GSSLYNSLVVARPSLS-------------------------------------------- 593
Query: 254 WKEPFTEVDSIFLLI-PMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYAN 312
TE++S+ LL PMPSLD I + GL P S P N
Sbjct: 594 -----TEINSLGLLAEPMPSLDGIVARQSIHPDGLPPTPSKRWPSAGP---------DGN 639
Query: 313 CYGE---LVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSK--PLPPPLY-PTRSNPGGGG 366
CY + + + R+ LVERN+ T K GL+ LK+K PL PT SNP G
Sbjct: 640 CYPQSPKRLCTESRNSLVERNSQTPPPKQSQTGLSILKAKYHPLQATFASPTVSNPVSGN 699
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
E CA G+ I F KI KLAA+RI + ERL+ +++ SVY + K+ L+Q+T+LFFN H
Sbjct: 700 EKCAVVGVQIFFSKILKLAAIRIRNLCERLR-HEELTVSVYNIF-KQILDQQTALFFNRH 757
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------DHVD 474
+DQIILCC YGVAK+SQL+LTFKEI+ NY ++PQCKP+VFRS+F HVD
Sbjct: 758 VDQIILCCLYGVAKVSQLSLTFKEIVNNYKREPQCKPEVFRSIFVGSTNRNGGFGSRHVD 817
Query: 475 IITFYNKIFAPTVKPLLVELGPVGTAMKTNRDS 507
II FYN++F PTVKPLLV L P T + R++
Sbjct: 818 IIVFYNQVFVPTVKPLLVALMPSSTRPEDKRNT 850
>gi|326510877|dbj|BAJ91786.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510927|dbj|BAJ91811.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 970
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 282/685 (41%), Positives = 369/685 (53%), Gaps = 143/685 (20%)
Query: 11 NITGAKRKFDSLASPVKTI-------TSPLSPHHSSTSKMV-VTPVSTAMTTAKWLRTII 62
N++ KR F++LASP KTI +SP SP + + K+V +TPV++AMTTAKWL +I
Sbjct: 336 NLSCPKRVFETLASPAKTIKNMLTVPSSPSSPANGGSVKVVQMTPVTSAMTTAKWLHEVI 395
Query: 63 CPLPSKPSADLQG-----------------------------------------ANLMDN 81
LP KPS L+ N D
Sbjct: 396 SSLPEKPSTKLEKFLSSCDTDLTSDVTKRVSIILEAIFPTKPSGHCGGSMGLNCTNAFDI 455
Query: 82 IWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHK 136
WAE R++EA KL Y+VLE +C AE+ + NLT L FHRC++ACSAELVLATHK
Sbjct: 456 PWAEARKMEASKLYYRVLEAVCRAESLNTNVNNLTPLLSNERFHRCLIACSAELVLATHK 515
Query: 137 TVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSS 196
TV M+F AVLE G+TAF+LSK+I++F+RHEESLPREL +R L S+ + S
Sbjct: 516 TVIMMFPAVLESTGLTAFDLSKIIENFVRHEESLPREL--------KRHLNSLEEQLLES 567
Query: 197 MYNSLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKE 256
M +WE+ +S+ P+
Sbjct: 568 M-----------------------------AWEKGSSLYNSLIVARPSLA---------- 588
Query: 257 PFTEVDSIFLLIP-MPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYG 315
+E++ + LL M SLD I NF + L P K P + C
Sbjct: 589 --SEINRLGLLAESMLSLDDIVARQNFHAEDL-PATPSKKQAADPDENGDTRSPKRLCI- 644
Query: 316 ELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSK--PLPPPLY-PTRSNPGGGGEPCAET 372
+ RS LV++ T K LK+K PL PT SNP G E CAE
Sbjct: 645 -----ESRSTLVDQIPQTPSAKQSY----TLKAKWCPLQSTFASPTVSNPVGRNEKCAEV 695
Query: 373 GINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIIL 432
G++I F KI KLAA+RI + ERL +Q E VY + K+ L+Q+T+LFFN HIDQ+IL
Sbjct: 696 GVHIFFSKILKLAAIRIRNLCERLGHVEQT-ERVYNIF-KQILDQQTALFFNRHIDQLIL 753
Query: 433 CCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------DHVDIITFYN 480
C YGVAK+SQL LTFKEI+ NY ++ QC P+VFRSVF HVDII FYN
Sbjct: 754 CSLYGVAKVSQLTLTFKEIVNNYKREQQCMPEVFRSVFVVNTDHNGGLGSRHVDIIIFYN 813
Query: 481 KIFAPTVKPLLVELGPVGT--AMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVS 538
++F P VKP LV L P G K N +S++ + +S F LPDMSPKKVS++H+VY+S
Sbjct: 814 EVFVPAVKPFLVALIPSGAHPDNKKNHNSQIPGSPKSSPFSNLPDMSPKKVSSSHNVYIS 873
Query: 539 PLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLN-SNRRVRGALNFDDVD 596
PLR ++ DAL+S SS+S+YAC+GESTHAY S +DL IN+ LN + RR+ +NFD
Sbjct: 874 PLRQTKKDALLSPSSRSFYACIGESTHAYQSSSEDLAAINNCLNYTTRRINTRINFD--- 930
Query: 597 VDVGLVSDSMVVNSLYLQNGSAAAS 621
+VSDS+V SL NG A+S
Sbjct: 931 ----MVSDSVVAGSLGQPNGVPASS 951
>gi|268306346|gb|ACY95294.1| retinoblastoma-related protein [Hordeum vulgare subsp. vulgare]
Length = 975
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 280/685 (40%), Positives = 367/685 (53%), Gaps = 143/685 (20%)
Query: 11 NITGAKRKFDSLASPVKTI-------TSPLSPHHSSTSKMV-VTPVSTAMTTAKWLRTII 62
N++ KR F++LASP KTI +SP SP + + K+V +TPV++AMTTAKWL +I
Sbjct: 341 NLSCPKRVFETLASPAKTIKNMLTVPSSPSSPANGGSVKVVQMTPVTSAMTTAKWLHEVI 400
Query: 63 CPLPSKPSADLQG-----------------------------------------ANLMDN 81
LP KPS L+ N D
Sbjct: 401 SSLPEKPSTKLEKFLSSCDTDLTSDVTKRVSIILEAIFPTKPSGHCGGSMGLNCTNAFDI 460
Query: 82 IWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHK 136
WAE R++EA KL Y+VLE +C AE+ + NLT L FHRC++ACSAELVLATHK
Sbjct: 461 PWAEARKMEASKLYYRVLEAVCRAESLNTNVNNLTPLLSNERFHRCLIACSAELVLATHK 520
Query: 137 TVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSS 196
TV M+F AVLE G+TAF+LSK+I++F+RHEES L R L +R L S+ + S
Sbjct: 521 TVIMMFPAVLESTGLTAFDLSKIIENFVRHEES----LPREL----KRHLNSLEEQLLES 572
Query: 197 MYNSLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKE 256
M +WE+ +S+ P+
Sbjct: 573 M-----------------------------AWEKGSSLYNSLIVARPSLA---------- 593
Query: 257 PFTEVDSIFLLIP-MPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYG 315
+E++ + LL M SLD I NF + L P K P + C
Sbjct: 594 --SEINRLGLLAESMLSLDDIVARQNFHAEDL-PATPSKKQAADPDENGDTRSPKRLCI- 649
Query: 316 ELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSK--PLPPPLY-PTRSNPGGGGEPCAET 372
+ RS LV++ T K LK+K PL PT SNP G E CAE
Sbjct: 650 -----ESRSTLVDQIPQTPSAKQSY----TLKAKWCPLQSTFASPTVSNPVGRNEKCAEV 700
Query: 373 GINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIIL 432
G++I F KI KLAA+RI + ERL +Q E VY + K+ L+Q+T+LFFN HIDQ+IL
Sbjct: 701 GVHILFSKILKLAAIRIRNLCERLGHVEQT-ERVYNIF-KQILDQQTALFFNRHIDQLIL 758
Query: 433 CCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------DHVDIITFYN 480
C YGVAK+SQL LTFKEI+ NY ++ QC P+VFRSVF HVDII FYN
Sbjct: 759 CSLYGVAKVSQLTLTFKEIVNNYKREQQCMPEVFRSVFVVNTDHNGGLGSRHVDIIIFYN 818
Query: 481 KIFAPTVKPLLVELGPVGT--AMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVS 538
++F P VKP LV L P G K N +S++ + +S F LPDMSPKKVS++H+VY+S
Sbjct: 819 EVFVPAVKPFLVALIPSGAHPDNKKNHNSQIPGSPKSSPFSNLPDMSPKKVSSSHNVYIS 878
Query: 539 PLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLN-SNRRVRGALNFDDVD 596
PLR ++ DAL+S SS+S+YAC+GESTHAY S +DL IN+ LN + RR+ +NFD
Sbjct: 879 PLRQTKKDALLSPSSRSFYACIGESTHAYQSSSEDLAAINNCLNYTTRRINTRINFD--- 935
Query: 597 VDVGLVSDSMVVNSLYLQNGSAAAS 621
+VSDS+V SL NG A+S
Sbjct: 936 ----MVSDSVVAGSLGQPNGVPASS 956
>gi|242071207|ref|XP_002450880.1| hypothetical protein SORBIDRAFT_05g020280 [Sorghum bicolor]
gi|241936723|gb|EES09868.1| hypothetical protein SORBIDRAFT_05g020280 [Sorghum bicolor]
Length = 630
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 236/563 (41%), Positives = 305/563 (54%), Gaps = 128/563 (22%)
Query: 7 GGAVNITGAKRKFDSLASPVKTI-------TSPLSPHHSSTSKMV-VTPVSTAMTTAKWL 58
G + N+ +KR F+ LASP KTI +SPLSP + K++ +TPV++AMTTAKWL
Sbjct: 108 GDSTNLGHSKRVFEILASPTKTIKNMLTVPSSPLSPATGGSVKILQMTPVTSAMTTAKWL 167
Query: 59 RTIICPLPSKPSADLQG-----------------------------------------AN 77
R +I LP KPS+ LQ AN
Sbjct: 168 REVISSLPEKPSSKLQQLLSSCDRDLTNAVTERVSIVLEAIFPTKSSADRGGSLGISCAN 227
Query: 78 LMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVL 132
D WAE R++EA KL Y+VLE +C AE Q + NLT L FHRC++ACSAELVL
Sbjct: 228 AFDIPWAEARKMEASKLYYRVLEAICRAELQNNNVNNLTPLLSNERFHRCLIACSAELVL 287
Query: 133 ATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWE 192
ATHK V M+F AVL+ G+TAF+LSK+I++F+RHEE+LPR+L+RHLNSLE++LLESMVWE
Sbjct: 288 ATHKPVFMMFPAVLDSTGLTAFDLSKIIENFVRHEETLPRQLKRHLNSLEQQLLESMVWE 347
Query: 193 KGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENL 251
KGSS+YNSL VARP++++EI LG
Sbjct: 348 KGSSLYNSLIVARPSVTSEIKRLG------------------------------------ 371
Query: 252 PWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYA 311
L PMPSLD + N GL P K P +
Sbjct: 372 -------------LLAEPMPSLDDLVARQNIHVEGL-PATPSKKRAAGPDDNADPRSPKR 417
Query: 312 NCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSK--PLPPPLY-PTRSNPGGGGEP 368
+C ++ R+ +VE N T K + +LK+K PL PT SNP GG E
Sbjct: 418 SC------NESRNTVVEHNLQTPPPKQSHMVSTSLKAKCHPLQSTFESPTVSNPVGGNEK 471
Query: 369 CAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHID 428
CA+ I I F KI KLAAVRI + ERLQ ++ E VY + + L+Q+T+LFFN HID
Sbjct: 472 CADVTIKIFFSKILKLAAVRIRNLCERLQ-HVELTERVYNVF-NQILDQQTTLFFNRHID 529
Query: 429 QIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------DHVDII 476
Q+ILCC YGVAK+ +L +FKE++ NY K+ QCKP+VF +V+ HVDII
Sbjct: 530 QLILCCLYGVAKVCKLEPSFKELLNNYRKEAQCKPEVFSNVYIGSRNRNDVLVSRHVDII 589
Query: 477 TFYNKIFAPTVKPLLVELGPVGT 499
TFYN++F P K LV L GT
Sbjct: 590 TFYNEVFVPAAKSFLVSLISSGT 612
>gi|268306348|gb|ACY95295.1| retinoblastoma-related protein [Hordeum vulgare subsp. vulgare]
Length = 885
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 240/606 (39%), Positives = 316/606 (52%), Gaps = 134/606 (22%)
Query: 11 NITGAKRKFDSLASPVKTI-------TSPLSPHHSSTSKMV-VTPVSTAMTTAKWLRTII 62
N++ KR F++LASP KTI +SP SP + + K+V +TPV++AMTTAKWL +I
Sbjct: 341 NLSCPKRVFETLASPAKTIKNMLTVPSSPSSPANGGSVKVVQMTPVTSAMTTAKWLHEVI 400
Query: 63 CPLPSKPSADLQG-----------------------------------------ANLMDN 81
LP KPS L+ N D
Sbjct: 401 SSLPEKPSTKLEKFLSSCDTDLTSDVTKRVSIILEAIFPTKPSGHCGGSMGLNCTNAFDI 460
Query: 82 IWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHK 136
WAE R++EA KL Y+VLE +C AE+ + NLT L FHRC++ACSAELVLATHK
Sbjct: 461 PWAEARKMEASKLYYRVLEAVCRAESLNTNVNNLTPLLSNERFHRCLIACSAELVLATHK 520
Query: 137 TVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSS 196
TV M+F AVLE G+TAF+LSK+I++F+RHEES L R L +R L S+ + S
Sbjct: 521 TVIMMFPAVLESTGLTAFDLSKIIENFVRHEES----LPREL----KRHLNSLEEQLLES 572
Query: 197 MYNSLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKE 256
M +WE+ +S+ P+
Sbjct: 573 M-----------------------------AWEKGSSLYNSLIVARPSLA---------- 593
Query: 257 PFTEVDSIFLLIP-MPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYG 315
+E++ + LL M SLD I NF + L P K P + + C
Sbjct: 594 --SEINRLGLLAESMLSLDDIVARQNFHAEDL-PATPSKKQAADPDENGDSRSPKRLCI- 649
Query: 316 ELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSK--PLPPPLY-PTRSNPGGGGEPCAET 372
+ RS LV++ T K LK+K PL PT SNP G E CAE
Sbjct: 650 -----ESRSTLVDQIPQTPSAKQSY----TLKAKWCPLQSTFASPTVSNPVGRNEKCAEV 700
Query: 373 GINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIIL 432
G++I F KI KLAA+RI + ERL +Q E VY + K+ L+Q+T+LFFN HIDQ+IL
Sbjct: 701 GVHIFFSKILKLAAIRIRNLCERLGHVEQT-ERVYNIF-KQILDQQTALFFNRHIDQLIL 758
Query: 433 CCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------DHVDIITFYN 480
C YGVAK+SQL LTFKEI+ NY ++ QC P+VFRSVF HVDII FYN
Sbjct: 759 CSLYGVAKVSQLTLTFKEIVNNYKREQQCMPEVFRSVFVVNTDHNGGLGSRHVDIIIFYN 818
Query: 481 KIFAPTVKPLLVELGPVGT--AMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVS 538
++F P VKP LV L P G K N +S++ + +S F LPDMSPKKVS++H+VY+S
Sbjct: 819 EVFVPAVKPFLVALIPSGAHPDNKKNHNSQIPGSPKSSPFSNLPDMSPKKVSSSHNVYIS 878
Query: 539 PLRTSE 544
PLR ++
Sbjct: 879 PLRQTK 884
>gi|375962740|gb|AFB17948.1| RBR-like protein, partial [Pinus sylvestris]
Length = 417
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 186/380 (48%), Positives = 236/380 (62%), Gaps = 39/380 (10%)
Query: 260 EVDSIFLLI-PMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELV 318
E++ + LL PMPSLDAIAMH +P+ + E S ++ +V
Sbjct: 11 EINRLGLLADPMPSLDAIAMHYG------APLAIPQRTEASSDPNVDTPSSPQRLANTVV 64
Query: 319 TDDYRSVLVERNNFTSLVKDCLLGLNN--LKSKPLPPP----LYPTRSNPGGGGEPCAET 372
+++ V+ E N+F S VK+ + +KS+ PP PTR NP GGGE CA+T
Sbjct: 65 SNETTGVMGEHNSFVSPVKERSSAFSAFPVKSRQQPPLQSAFASPTRPNPYGGGETCADT 124
Query: 373 GINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIIL 432
I + K+ KLAA+RI + +RLQ E VY L L ++T +FFN HIDQ+IL
Sbjct: 125 TIYVFCQKVLKLAAIRIKCLSDRLQQPNLAMEQVYRLL-NLVLREQTGIFFNRHIDQVIL 183
Query: 433 CCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-----------DHVDIITFYNK 481
C FYG+AKI Q+NLTF+EII NY KQPQCKPQVFR+VF + VDII FYN+
Sbjct: 184 CSFYGIAKIQQMNLTFREIINNYRKQPQCKPQVFRNVFVESRRYGKLGHETVDIIAFYNR 243
Query: 482 IFAPTVKPLLVELGPVGTAMKTNRDSEVNHNND--------ASVFPALPDMSPKKVSATH 533
+F P VKPLLV+ P + ++ + SE D +S F LPDMSPKKVSATH
Sbjct: 244 VFIPAVKPLLVKFAPSESDVEQSHGSEDTEKIDGPSPGSPGSSPFQRLPDMSPKKVSATH 303
Query: 534 SVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNRRVRGALNF 592
+VYVSPLR+++M+ L SH+SKSYYACVGEST AY SP KDLT IN+RLNS RRV G LNF
Sbjct: 304 NVYVSPLRSAKMENLNSHNSKSYYACVGESTRAYQSPSKDLTAINNRLNS-RRVSGRLNF 362
Query: 593 DDVDVDVGLVSDSMVVNSLY 612
D D GLVSDS+V S+Y
Sbjct: 363 D----DPGLVSDSVVAGSVY 378
>gi|2352797|gb|AAB69650.1| retinoblastoma-related protein 2a [Zea mays]
Length = 420
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 199/468 (42%), Positives = 255/468 (54%), Gaps = 85/468 (18%)
Query: 173 ELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPALSAEINLGFTDILFQDSQDSWEEFT 232
EL+RHLNSLEE++LESM WEKGSS+ +
Sbjct: 1 ELKRHLNSLEEQILESMAWEKGSSL---------------------------------YN 27
Query: 233 SILTVPPTDSPTRQHYENLPWWKEPFTEVDSIFLLIP-MPSLDAIAMHINFSSGGLSPVH 291
S++ P+ + +E++ LL MPSLD + N GL P
Sbjct: 28 SLIVARPSVA----------------SEINRFGLLAESMPSLDDLVARQNIHIEGL-PAT 70
Query: 292 SLHKHETSPVCSIFNFQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSK-- 349
K + C ++ RS +VE N T K C + L +LK+K
Sbjct: 71 PSKKRAAGRDDNADPRSPKRPC------NESRSTVVEHNLQTPPPKQCHMVLTSLKAKCH 124
Query: 350 PLPPPLY-PTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYC 408
PL PT SNP GG E CA+ I I F KI KLAA+RI + ER+Q +Q E VY
Sbjct: 125 PLQSTFASPTVSNPVGGNEKCADVTIQIFFSKILKLAAIRIRNLCERIQYMEQT-ERVYN 183
Query: 409 LCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRS 468
+ K+ L+Q+T+LFFN H+ Q+ILCC YGVAK+ QL L+F+EI+ NY K+ QCKP+VF S
Sbjct: 184 VF-KQILDQQTTLFFNRHMHQLILCCLYGVAKVCQLELSFREILNNYKKEAQCKPEVFLS 242
Query: 469 VF------------DHVDIITFYNKIFAPTVKPLLVELGPVGT--AMKTNRDSEVNHNND 514
++ HVDIITFYN++F P KP LV L GT K N +V +
Sbjct: 243 IYIGSRNHNGVLISRHVDIITFYNEVFVPAAKPFLVSLISSGTRPEDKKNASGQVPGSPK 302
Query: 515 ASVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDL 573
S FP LPDMSPKKVSA+H+VYVSPLR ++MD L+S SS+S+YAC+GE THAY SP KDL
Sbjct: 303 LSPFPNLPDMSPKKVSASHNVYVSPLRQTKMDLLLSPSSRSFYACIGEGTHAYQSPSKDL 362
Query: 574 TDINHRLNSN-RRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAA 620
IN RLN N RRV LNFD +VSDS+V SL NG + +
Sbjct: 363 AAINSRLNYNGRRVNSRLNFD-------MVSDSVVAGSLGQPNGGSTS 403
>gi|297608904|ref|NP_001062372.2| Os08g0538700 [Oryza sativa Japonica Group]
gi|255678608|dbj|BAF24286.2| Os08g0538700, partial [Oryza sativa Japonica Group]
Length = 312
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 169/343 (49%), Positives = 196/343 (57%), Gaps = 108/343 (31%)
Query: 16 KRKFDSLASPVKTITSP--LSP---------HHSSTSKMV-VTPVSTAMTTAKWLRTIIC 63
+RK+D +ASP K+ITSP +SP + +SKM +TPVSTAMTTAKWLR+ I
Sbjct: 7 QRKYDVMASPAKSITSPSPMSPPRFCASPTGNGYCSSKMAPITPVSTAMTTAKWLRSTIS 66
Query: 64 PLPSKPSADL----------------------------------------QGANLMDNIW 83
PLPSKPS +L + N +D IW
Sbjct: 67 PLPSKPSGELLRFFSACDKDVTDDITRRAGIILGAIFTSSSFGERICTSVRSTNRIDAIW 126
Query: 84 AEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTV 138
EQR++EALKL Y+VLE+MC AE Q+L NLTSL FHRCM+ACSAELVLATHKTV
Sbjct: 127 TEQRKMEALKLYYRVLESMCRAETQILSGNNLTSLLSNERFHRCMIACSAELVLATHKTV 186
Query: 139 TMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY 198
TM+F AVLE+ GITAF+LSKVI+SF+RHE++LPREL+RHLNSLEERLLESM WEKGSSMY
Sbjct: 187 TMMFPAVLEKTGITAFDLSKVIESFVRHEDTLPRELKRHLNSLEERLLESMAWEKGSSMY 246
Query: 199 NSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEP 257
NSL VARP LSAEIN LG
Sbjct: 247 NSLIVARPTLSAEINRLG------------------------------------------ 264
Query: 258 FTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSP 300
L PMPSLDAIA H N S GL P+ K E SP
Sbjct: 265 -------LLAEPMPSLDAIAAHHNISLEGLPPL-PFQKQEHSP 299
>gi|343960570|dbj|BAK64056.1| retinoblastoma-related protein;2 [Physcomitrella patens subsp.
patens]
Length = 1071
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 139/272 (51%), Positives = 167/272 (61%), Gaps = 61/272 (22%)
Query: 3 GSLFGGAVNITGAKRKFDSLASPVK-------------------TITSPLSPHHSSTSKM 43
G+L + TG+KRKFD +ASPV+ + +S SS K
Sbjct: 435 GTLSNESPRYTGSKRKFDIMASPVRFGAFSMGAAPSSPAASPWPSPVKHMSTQGSSGGKR 494
Query: 44 V-VTPVSTAMTTAKWLRTIICPLPSKPSADLQ---------------------------- 74
TPV+ MTTAKWLRT+I PL S+PS +LQ
Sbjct: 495 PPSTPVTVTMTTAKWLRTVITPLASEPSEELQLFFRSCDRDISADVKNRAHVLLELIFSV 554
Query: 75 --------GANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHR 121
A MD IWAEQR+LEA+KL YKVL MC +E Q LH KNL+SL FHR
Sbjct: 555 ERRGSWQNVAGFMDTIWAEQRKLEAVKLYYKVLGAMCRSEEQRLHTKNLSSLLSNERFHR 614
Query: 122 CMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSL 181
CM+ACSAELVLATHKTVTM F AVL+ GITAF+LSKVI+ F+RHE++LPREL+RHLN++
Sbjct: 615 CMIACSAELVLATHKTVTMGFPAVLDPAGITAFDLSKVIEYFVRHEDTLPRELKRHLNTI 674
Query: 182 EERLLESMVWEKGSSMYNSLTVARPALSAEIN 213
EER+LESM W KGSSMYNSL VARP+L+ EIN
Sbjct: 675 EERILESMAWGKGSSMYNSLIVARPSLANEIN 706
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/251 (45%), Positives = 152/251 (60%), Gaps = 24/251 (9%)
Query: 357 PTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLN 416
P R +P GGGE CA+T IN+ F K LA VRI + ER+ Q + E VY + + TL+
Sbjct: 805 PQRPSPLGGGETCADTVINVFFQKALVLAGVRIRTVCERIGQPQHLIERVYKVF-QHTLH 863
Query: 417 QRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------ 470
TSLFFN HIDQ++LC YGV K+S++ + F++II++Y QPQ K V R+VF
Sbjct: 864 HETSLFFNRHIDQLVLCTIYGVCKVSKVEVKFRDIIHHYRSQPQNKLHVVRNVFIDQPPL 923
Query: 471 ---------DHVDIITFYNKIFAPTVKPLLVEL-------GPVGTAMKTNRDSEVNHNND 514
+ DII FYN +F K LV++ P D E +
Sbjct: 924 RRAGKTGGLESGDIIKFYNDVFVHATKKFLVQVDTNSGVRSPRKIHGPDGEDGEAPGSPV 983
Query: 515 ASVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDL 573
ASVF + PD+SPKKVSA H+V+VSPLR+S+++ L+S +++ YACVGEST Y SP KDL
Sbjct: 984 ASVFSSFPDISPKKVSALHNVFVSPLRSSKVEKLMSPRTRTLYACVGESTRDYQSPSKDL 1043
Query: 574 TDINHRLNSNR 584
T IN+RLN+ R
Sbjct: 1044 TAINNRLNNKR 1054
>gi|168029230|ref|XP_001767129.1| Rb -related protein [Physcomitrella patens subsp. patens]
gi|162681625|gb|EDQ68050.1| Rb -related protein [Physcomitrella patens subsp. patens]
Length = 937
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 139/272 (51%), Positives = 167/272 (61%), Gaps = 61/272 (22%)
Query: 3 GSLFGGAVNITGAKRKFDSLASPVK-------------------TITSPLSPHHSSTSKM 43
G+L + TG+KRKFD +ASPV+ + +S SS K
Sbjct: 327 GTLSNESPRYTGSKRKFDIMASPVRFGAFSMGAAPSSPAASPWPSPVKHMSTQGSSGGKR 386
Query: 44 V-VTPVSTAMTTAKWLRTIICPLPSKPSADLQ---------------------------- 74
TPV+ MTTAKWLRT+I PL S+PS +LQ
Sbjct: 387 PPSTPVTVTMTTAKWLRTVITPLASEPSEELQLFFRSCDRDISADVKNRAHVLLELIFSV 446
Query: 75 --------GANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHR 121
A MD IWAEQR+LEA+KL YKVL MC +E Q LH KNL+SL FHR
Sbjct: 447 ERRGSWQNVAGFMDTIWAEQRKLEAVKLYYKVLGAMCRSEEQRLHTKNLSSLLSNERFHR 506
Query: 122 CMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSL 181
CM+ACSAELVLATHKTVTM F AVL+ GITAF+LSKVI+ F+RHE++LPREL+RHLN++
Sbjct: 507 CMIACSAELVLATHKTVTMGFPAVLDPAGITAFDLSKVIEYFVRHEDTLPRELKRHLNTI 566
Query: 182 EERLLESMVWEKGSSMYNSLTVARPALSAEIN 213
EER+LESM W KGSSMYNSL VARP+L+ EIN
Sbjct: 567 EERILESMAWGKGSSMYNSLIVARPSLANEIN 598
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 112/249 (44%), Positives = 151/249 (60%), Gaps = 24/249 (9%)
Query: 357 PTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLN 416
P R +P GGGE CA+T IN+ F K LA VRI + ER+ Q + E VY + + TL+
Sbjct: 690 PQRPSPLGGGETCADTVINVFFQKALVLAGVRIRTVCERIGQPQHLIERVYKVF-QHTLH 748
Query: 417 QRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------ 470
TSLFFN HIDQ++LC YGV K+S++ + F++II++Y QPQ K V R+VF
Sbjct: 749 HETSLFFNRHIDQLVLCTIYGVCKVSKVEVKFRDIIHHYRSQPQNKLHVVRNVFIDQPPL 808
Query: 471 ---------DHVDIITFYNKIFAPTVKPLLVEL-------GPVGTAMKTNRDSEVNHNND 514
+ DII FYN +F K LV++ P D E +
Sbjct: 809 RRAGKTGGLESGDIIKFYNDVFVHATKKFLVQVDTNSGVRSPRKIHGPDGEDGEAPGSPV 868
Query: 515 ASVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDL 573
ASVF + PD+SPKKVSA H+V+VSPLR+S+++ L+S +++ YACVGEST Y SP KDL
Sbjct: 869 ASVFSSFPDISPKKVSALHNVFVSPLRSSKVEKLMSPRTRTLYACVGESTRDYQSPSKDL 928
Query: 574 TDINHRLNS 582
T IN+RLN+
Sbjct: 929 TAINNRLNN 937
>gi|343960572|dbj|BAK64057.1| retinoblastoma-related protein;3 [Physcomitrella patens subsp.
patens]
Length = 1068
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 138/272 (50%), Positives = 166/272 (61%), Gaps = 62/272 (22%)
Query: 3 GSLFGGAVNITGAKRKFDSLASPVK-------------------TITSPLSPHHSSTSKM 43
G+L + +G+KRKFD +ASPV+ + + SS K
Sbjct: 435 GTLSNESPRFSGSKRKFDIMASPVRFGAFSMGAAPSSPAASPWSSPVKHMGTQGSSGGKR 494
Query: 44 V-VTPVSTAMTTAKWLRTIICPLPSKPSADLQ---------------------------- 74
TPV+ MTTAKWLRT+I PL ++PS +LQ
Sbjct: 495 PPSTPVTITMTTAKWLRTVITPLAAEPSVELQLFFRSCDRDISADVKNRAHVLLDLIFSA 554
Query: 75 --------GANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHR 121
A LMD +W EQR+LEA+KL YKVL MC +E Q LH NLTSL FHR
Sbjct: 555 ERGGGWQGVAGLMD-VWPEQRKLEAIKLYYKVLGAMCRSEEQRLHTHNLTSLLSNERFHR 613
Query: 122 CMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSL 181
CM+ACSAELVLATHKTVTM F AVLE GITAF+LSKVI+ F+RHEE+LPREL+RHLN++
Sbjct: 614 CMIACSAELVLATHKTVTMGFPAVLEPAGITAFDLSKVIEYFVRHEETLPRELKRHLNTI 673
Query: 182 EERLLESMVWEKGSSMYNSLTVARPALSAEIN 213
EER+LESM WEKGSSMYNSL VARP+L+ EIN
Sbjct: 674 EERILESMAWEKGSSMYNSLIVARPSLANEIN 705
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/258 (44%), Positives = 158/258 (61%), Gaps = 26/258 (10%)
Query: 357 PTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLN 416
P R +P GGGE CA+T IN+ F K LAAVRI + ER+ Q + E VY + + L+
Sbjct: 803 PQRPSPLGGGETCADTVINVFFQKALVLAAVRIRTVCERIGQPQHLIERVYKVF-QHALH 861
Query: 417 QRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------ 470
TSLFFN HIDQ++LC YGV K+S++++ F++II++Y QPQ K V R+VF
Sbjct: 862 HETSLFFNRHIDQLVLCTIYGVCKVSKVDVKFRDIIHHYRSQPQNKLHVVRNVFIDQPPL 921
Query: 471 ---------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNND------- 514
+ DII FYN +F K LV++ ++M++ R + + ND
Sbjct: 922 RRAGKTGGLESGDIIKFYNDVFVHVTKKFLVQVD-TNSSMRSPRKAHGSDGNDGEAPGSP 980
Query: 515 -ASVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKD 572
AS+F PD+SPKKVSA H+V+VSPLR+S++D L+S +++ YACVGEST Y SP KD
Sbjct: 981 VASIFSTFPDISPKKVSALHNVFVSPLRSSKVDKLMSPRTRTLYACVGESTRDYQSPSKD 1040
Query: 573 LTDINHRLNSNRRVRGAL 590
LT IN+RLN G L
Sbjct: 1041 LTAINNRLNKRFIAHGDL 1058
>gi|168035668|ref|XP_001770331.1| Rb -related protein [Physcomitrella patens subsp. patens]
gi|254789788|sp|A9SVH7.1|RBR_PHYPA RecName: Full=Retinoblastoma-related protein
gi|162678362|gb|EDQ64821.1| Rb -related protein [Physcomitrella patens subsp. patens]
Length = 1116
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/264 (51%), Positives = 161/264 (60%), Gaps = 62/264 (23%)
Query: 11 NITGAKRKFDSLASPVK-------------------TITSPLSPHHSSTSKMV-VTPVST 50
N+ +RKFD +ASPV+ + + SS K TPV+
Sbjct: 485 NVPVYQRKFDIMASPVRFGAFSMGAAPSSPAASPWSSPVKHMGTQGSSGGKRPPSTPVTI 544
Query: 51 AMTTAKWLRTIICPLPSKPSADLQ------------------------------------ 74
MTTAKWLRT+I PL ++PS +LQ
Sbjct: 545 TMTTAKWLRTVITPLAAEPSVELQLFFRSCDRDISADVKNRAHVLLDLIFSAERGGGWQG 604
Query: 75 GANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
A LMD +W EQR+LEA+KL YKVL MC +E Q LH NLTSL FHRCM+ACSAE
Sbjct: 605 VAGLMD-VWPEQRKLEAIKLYYKVLGAMCRSEEQRLHTHNLTSLLSNERFHRCMIACSAE 663
Query: 130 LVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESM 189
LVLATHKTVTM F AVLE GITAF+LSKVI+ F+RHEE+LPREL+RHLN++EER+LESM
Sbjct: 664 LVLATHKTVTMGFPAVLEPAGITAFDLSKVIEYFVRHEETLPRELKRHLNTIEERILESM 723
Query: 190 VWEKGSSMYNSLTVARPALSAEIN 213
WEKGSSMYNSL VARP+L+ EIN
Sbjct: 724 AWEKGSSMYNSLIVARPSLANEIN 747
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/264 (39%), Positives = 146/264 (55%), Gaps = 32/264 (12%)
Query: 357 PTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLN 416
P R +P GGGE CA+T IN+ F K LAAVRI + ER+ Q + E VY + + L+
Sbjct: 845 PQRPSPLGGGETCADTVINVFFQKALVLAAVRIRTVCERIGQPQHLIERVYKVF-QHALH 903
Query: 417 QRTSLFFNCHIDQIILCCFYGVAKISQLNLT-FKEIIYNYGKQPQCKPQV-FRSV--FDH 472
TSLFFN HIDQ++LC YGV K +++ F+ ++ + + F+ +
Sbjct: 904 HETSLFFNRHIDQLVLCTIYGVCKKPSYSVSGFRSYRHSCDMAMRMTLWINFQKTGGLES 963
Query: 473 VDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNND------------------ 514
DII FYN +F K LV++ ++M++ R + + ND
Sbjct: 964 GDIIKFYNDVFVHVTKKFLVQVD-TNSSMRSPRKAHGSDGNDGTISKLLKDEMEVIIIKG 1022
Query: 515 -------ASVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY 567
AS+F PD+SPKKVSA H+V+VSPLR+S++D L+S +++ YACVGEST Y
Sbjct: 1023 EAPGSPVASIFSTFPDISPKKVSALHNVFVSPLRSSKVDKLMSPRTRTLYACVGESTRDY 1082
Query: 568 -SPFKDLTDINHRLNSNRRVRGAL 590
SP KDLT IN+RLN G L
Sbjct: 1083 QSPSKDLTAINNRLNKRFIAHGDL 1106
>gi|343960568|dbj|BAK64055.1| retinoblastoma-related protein;1 [Physcomitrella patens subsp.
patens]
Length = 985
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 131/251 (52%), Positives = 154/251 (61%), Gaps = 46/251 (18%)
Query: 9 AVNITGAKRKFDSLASPVKTITSPLSP-------HHSSTSKMVVTPVSTAMTTAKWLRTI 61
AV G R S ASP SP S ST K TPVS MTTAKWLRT+
Sbjct: 448 AVTSAGQGRAVSSGASPSSPCGSPESSPAVMGGVAGGSTCKPPPTPVSITMTTAKWLRTV 507
Query: 62 ICPLPSKPSADLQ-----------------------------------GANLMDNIWAEQ 86
I PL ++PS +L+ A D++W +Q
Sbjct: 508 IAPLSAEPSPELERYLRVFERNIASEMKVRANVILGGIFEARKWRGAGEAGTSDSMWGDQ 567
Query: 87 RRLEALKLNYKVLETMCTAEAQVLHAKNLTSL----FHRCMLACSAELVLATHKTVTMLF 142
RRLEALKL YKVL MCTAE+ L +++L L FHRCMLACSAELVLA+HKTVTM F
Sbjct: 568 RRLEALKLYYKVLGAMCTAESHRLRSEHLPFLPNERFHRCMLACSAELVLASHKTVTMTF 627
Query: 143 LAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLT 202
AVLE GITAF+LSKVI+ F+RHEE+LPREL+RHLNS+EERLLESM WEKGSSM+NSL
Sbjct: 628 PAVLEPAGITAFDLSKVIEGFVRHEETLPRELKRHLNSIEERLLESMAWEKGSSMFNSLA 687
Query: 203 VARPALSAEIN 213
+A+ L+ EIN
Sbjct: 688 IAKANLAPEIN 698
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/167 (50%), Positives = 107/167 (64%), Gaps = 19/167 (11%)
Query: 347 KSKPLPPPLY----PTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQI 402
KS+ +PP L P R NP GGE CAET IN+ F K+ KLAAVRI + ERLQ SQQ+
Sbjct: 793 KSRAMPPLLLAFASPQRPNPQAGGETCAETCINVFFQKVLKLAAVRIRNLCERLQQSQQV 852
Query: 403 RESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCK 462
E V LN T LFFN HIDQIILCC YG+ K+S++N+TF++IIY+Y KQPQCK
Sbjct: 853 VERVNRAL-HHALNHETGLFFNRHIDQIILCCVYGICKVSKVNVTFRDIIYHYRKQPQCK 911
Query: 463 PQVFRSVF--------------DHVDIITFYNKIFAPTVKPLLVELG 495
P VFR+V + DII FYN++F P+ K L+++G
Sbjct: 912 PYVFRNVLLDGSVVWRSGKAGQETGDIIRFYNEVFVPSTKSFLLQVG 958
>gi|26190149|emb|CAD21954.1| putative retinoblastoma protein [Physcomitrella patens]
Length = 597
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/251 (51%), Positives = 153/251 (60%), Gaps = 46/251 (18%)
Query: 9 AVNITGAKRKFDSLASPVKTITSPLSP-------HHSSTSKMVVTPVSTAMTTAKWLRTI 61
AV G R S ASP SP S ST K TPVS MTTAKWLRT+
Sbjct: 72 AVTSAGQGRAVSSGASPSSPCGSPESSPAVMGGVAGGSTCKPPPTPVSITMTTAKWLRTV 131
Query: 62 ICPLPSKPSADLQ-----------------------------------GANLMDNIWAEQ 86
I PL ++PS +L+ A D++W +Q
Sbjct: 132 IAPLSAEPSPELERYLRVFERNIASEMKVRANVILGGIFEARKWRGAGEAGTSDSMWGDQ 191
Query: 87 RRLEALKLNYKVLETMCTAEAQVLHAKNLTSL----FHRCMLACSAELVLATHKTVTMLF 142
RRLEALKL YKVL MCTAE+ L +++L L FHRCMLACSAELVLA+HKTVTM F
Sbjct: 192 RRLEALKLYYKVLGAMCTAESHRLRSEHLPFLPNERFHRCMLACSAELVLASHKTVTMTF 251
Query: 143 LAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLT 202
AVLE GITAF+LSKVI+ F+RHEE+LPREL+RHLNS+EERLLESM WEKGSSM+N L
Sbjct: 252 PAVLEPAGITAFDLSKVIEGFVRHEETLPRELKRHLNSIEERLLESMAWEKGSSMFNCLA 311
Query: 203 VARPALSAEIN 213
+A+ L+ EIN
Sbjct: 312 IAKANLAPEIN 322
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 111/178 (62%), Gaps = 20/178 (11%)
Query: 347 KSKPLPPPLY----PTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQI 402
KS+ +PP L P R NP GGE CAET IN+ F K+ KLAAVRI + ERLQ SQQ+
Sbjct: 417 KSRAMPPLLLAFASPQRPNPQAGGETCAETCINVFFQKVLKLAAVRIRNLCERLQQSQQV 476
Query: 403 RESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCK 462
E V LN T LFFN HIDQIILCC YG+ K+S++N+TF++IIY+Y KQPQCK
Sbjct: 477 VERVN-RALHHALNHETGLFFNRHIDQIILCCVYGICKVSKVNVTFRDIIYHYRKQPQCK 535
Query: 463 PQVFRSVF--------------DHVDIITFYNKIFAPTVKPLLVELG-PVGTAMKTNR 505
P VFR+V + DII FYN++F P+ K L+++G G A+ R
Sbjct: 536 PYVFRNVLLDGSVVWRSGKAGQETGDIIRFYNEVFVPSTKSFLLQVGSSAGVAVPKQR 593
>gi|302781328|ref|XP_002972438.1| hypothetical protein SELMODRAFT_97707 [Selaginella moellendorffii]
gi|300159905|gb|EFJ26524.1| hypothetical protein SELMODRAFT_97707 [Selaginella moellendorffii]
Length = 839
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 154/238 (64%), Gaps = 15/238 (6%)
Query: 357 PTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLN 416
P + NP GE CAE +N+ F K+ KLAA RI + ERL + E ++ + + LN
Sbjct: 600 PQKPNPHASGETCAEAVMNVFFQKVLKLAASRIKVLCERLSQPSHVVEQIFQVF-EYALN 658
Query: 417 QRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------ 470
RT++FFN HIDQIILC YGV K+S LN+TF++II+ Y KQPQ + VFR+V+
Sbjct: 659 -RTTIFFNRHIDQIILCSMYGVCKVSILNVTFRDIIFQYRKQPQSRNHVFRNVYLEQRRG 717
Query: 471 --DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNND----ASVFPALPDM 524
D DII FYN+I+ P K L+ + +M + + + AS+FPA+PDM
Sbjct: 718 RTDMGDIIKFYNEIYVPATKAFLMNIAARPASMVAGKGTATDEAPSSPPRASMFPAIPDM 777
Query: 525 SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLN 581
SP+KVSA H+V+VSPLR ++++ ++S S+S YACVGESTHAY SP KDLT IN RLN
Sbjct: 778 SPRKVSARHNVFVSPLRNTKVENIMSPHSRSLYACVGESTHAYQSPSKDLTVINCRLN 835
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 136/210 (64%), Gaps = 42/210 (20%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADL-----------------QGANLMDNI------ 82
TPVS MTTAKWLRT+I PLPS+PS +L + +++ I
Sbjct: 305 TPVSVTMTTAKWLRTVIAPLPSEPSTELLEYLRSCDRDITEEVTHRAKVILEAIFPIYSP 364
Query: 83 --------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCM 123
WA QRR EA KL Y+VL +C AE+ L +KNLTS+ FHRCM
Sbjct: 365 GSWKATLHSSGSLEWAVQRRSEASKLYYRVLTALCHAESLRLQSKNLTSVLTSEKFHRCM 424
Query: 124 LACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEE 183
LACS ELVLATHKTV + F AVL GITAF++SKVI+SF+RHEE+LPREL+RHLNS+EE
Sbjct: 425 LACSGELVLATHKTVILSFPAVLGPTGITAFDMSKVIESFVRHEETLPRELKRHLNSIEE 484
Query: 184 RLLESMVWEKGSSMYNSLTVARPALSAEIN 213
RLLESM WEKGSSMYNSL VARP EI
Sbjct: 485 RLLESMAWEKGSSMYNSLIVARPRFGDEIR 514
>gi|302814637|ref|XP_002989002.1| hypothetical protein SELMODRAFT_451523 [Selaginella moellendorffii]
gi|300143339|gb|EFJ10031.1| hypothetical protein SELMODRAFT_451523 [Selaginella moellendorffii]
Length = 879
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 136/209 (65%), Gaps = 42/209 (20%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADL-----------------QGANLMDNI------ 82
TPVS MTTAKWLRT+I PLP++PS +L +G L++ I
Sbjct: 337 TPVSVTMTTAKWLRTVIAPLPAEPSTELLDYLKSCDRDITEEVTHRGKALLEAIFPVYPQ 396
Query: 83 --------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCM 123
W QRR EA KL Y+VL +C AE L +KNLTS+ FHRCM
Sbjct: 397 GSWRATLHSSGSSEWTVQRRSEASKLYYRVLTALCRAEFLRLQSKNLTSVLTSEKFHRCM 456
Query: 124 LACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEE 183
LACSAELVLA HKT+ + F AVLE GITAF+LSKVI+SF+RHE +LPREL+RHLNS+EE
Sbjct: 457 LACSAELVLAAHKTIILAFPAVLEPTGITAFDLSKVIESFVRHEPTLPRELKRHLNSIEE 516
Query: 184 RLLESMVWEKGSSMYNSLTVARPALSAEI 212
RLLESM WEKGSSMYNSL VA+P + +I
Sbjct: 517 RLLESMAWEKGSSMYNSLVVAKPRFAPDI 545
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 137/320 (42%), Positives = 184/320 (57%), Gaps = 44/320 (13%)
Query: 322 YRSVLVERNNFTSLVKDCLLGLNNLKSKPLP--PPLYPTRSNPG-GGGEPCA-------- 370
Y S++V + F ++ L S+PL PL P+ S G GE A
Sbjct: 531 YNSLVVAKPRFAPDIRRL-----ELISEPLRTLEPLIPSYSQGGTSKGEDMAAESNSPTE 585
Query: 371 ---ETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
E + + F K+ KLAA RI + ERL + E ++ + + LN RT++FFN HI
Sbjct: 586 AMHEIVMVVFFQKVLKLAASRIKVLCERLMQPSFVVEHIFQVV-EYALN-RTTIFFNRHI 643
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------DHVDIITFY 479
DQI+LC YGV K+ LN++FK+II+ Y KQPQ + VF+SV+ + DII FY
Sbjct: 644 DQILLCSTYGVCKVLSLNVSFKDIIFQYRKQPQSRNHVFKSVYLKHRGGIAETGDIIKFY 703
Query: 480 NKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA-------SVFPALPDMSPKKVSAT 532
N +F P VK LV + P +M T S+V N A SV PA+PDMSP+KVSA
Sbjct: 704 NTVFVPAVKSFLVTIAPPSVSM-TASQSDVADENTAPNSPARPSVLPAIPDMSPRKVSAR 762
Query: 533 HSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNRRVRGALN 591
H+VYVSPLR ++++ ++S SKS YACVGESTHAY SP KDLT IN RLNS+ R L+
Sbjct: 763 HNVYVSPLRNTKVENIMSPHSKSLYACVGESTHAYQSPSKDLTAINCRLNSSNGRR--LD 820
Query: 592 FDDVDVDVGLVSDSMVVNSL 611
F + ++SDS V +L
Sbjct: 821 F----LGPSMISDSFVSGAL 836
>gi|302786676|ref|XP_002975109.1| hypothetical protein SELMODRAFT_451524 [Selaginella moellendorffii]
gi|300157268|gb|EFJ23894.1| hypothetical protein SELMODRAFT_451524 [Selaginella moellendorffii]
Length = 867
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 136/209 (65%), Gaps = 42/209 (20%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADL-----------------QGANLMDNI------ 82
TPVS MTTAKWLRT+I PLP++PS +L +G L++ I
Sbjct: 337 TPVSVTMTTAKWLRTVIAPLPAEPSIELLDYLKSCDRDITEEVTHRGKALLEAIFPVYPQ 396
Query: 83 --------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCM 123
W QRR EA KL Y+VL +C AE L +KNLTS+ FHRCM
Sbjct: 397 GSWRATLHSSGSSEWTVQRRSEASKLYYRVLTALCRAEFLRLQSKNLTSVLTSEKFHRCM 456
Query: 124 LACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEE 183
LACSAELVLA HKT+ + F AVLE GITAF+LSKVI+SF+RHE +LPREL+RHLNS+EE
Sbjct: 457 LACSAELVLAAHKTIILAFPAVLEPTGITAFDLSKVIESFVRHEPTLPRELKRHLNSIEE 516
Query: 184 RLLESMVWEKGSSMYNSLTVARPALSAEI 212
RLLESM WEKGSSMYNSL VA+P + +I
Sbjct: 517 RLLESMAWEKGSSMYNSLVVAKPRFAPDI 545
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/313 (41%), Positives = 179/313 (57%), Gaps = 42/313 (13%)
Query: 322 YRSVLVERNNFTSLVKDCLLGLNNLKSKPLP--PPLYPTRSNPG-GGGEPCA-------- 370
Y S++V + F ++ L S+PL PL P+ S G GE A
Sbjct: 531 YNSLVVAKPRFAPDIRRL-----ELISEPLRTLEPLIPSYSQGGTSKGEDMAAESNSPTE 585
Query: 371 ---ETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
E + + F K+ KLAA RI + ERL + E ++ + + LN RT++FFN HI
Sbjct: 586 AMHEIVMVVFFQKVLKLAASRIKVLCERLMQPSFVVEHIFQVV-EYALN-RTTIFFNRHI 643
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------DHVDIITFY 479
DQI+LC YGV K+ LN++FK+II+ Y KQPQ + VF+SV+ + DII FY
Sbjct: 644 DQILLCSTYGVCKVLSLNVSFKDIIFQYRKQPQSRNHVFKSVYLKHRGGIAETGDIIKFY 703
Query: 480 NKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSP 539
N +F P VK LV + P +M ++ + N A+PDMSP+KVSA H+VYVSP
Sbjct: 704 NTVFVPAVKSFLVTIAPPSVSMTASQSDVADENT------AIPDMSPRKVSARHNVYVSP 757
Query: 540 LRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNRRVRGALNFDDVDVD 598
LR ++++ ++S SKS YACVGESTHAY SP KDLT IN RLNS+ R L+F +
Sbjct: 758 LRNTKVENIMSPHSKSLYACVGESTHAYQSPSKDLTAINCRLNSSNGRR--LDF----LG 811
Query: 599 VGLVSDSMVVNSL 611
++SDS V +L
Sbjct: 812 PSMISDSFVSGAL 824
>gi|345290645|gb|AEN81814.1| AT3G12280-like protein, partial [Capsella grandiflora]
gi|345290657|gb|AEN81820.1| AT3G12280-like protein, partial [Capsella rubella]
gi|345290659|gb|AEN81821.1| AT3G12280-like protein, partial [Capsella rubella]
gi|345290661|gb|AEN81822.1| AT3G12280-like protein, partial [Capsella rubella]
gi|345290663|gb|AEN81823.1| AT3G12280-like protein, partial [Capsella rubella]
Length = 172
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/172 (59%), Positives = 112/172 (65%), Gaps = 46/172 (26%)
Query: 52 MTTAKWLRTIICPLPSKPS----------------------------------------- 70
MTTAKWLR +ICPL KPS
Sbjct: 1 MTTAKWLRAVICPLLPKPSPGLEHFLKSCDRDITNDVTRRAHIILEAIFPNSSLGAQCGG 60
Query: 71 ADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
LQG +LMD+IWAEQRRLEALKL Y+VLE MC AEAQ+LHA NL SL FHRCMLA
Sbjct: 61 GSLQGVDLMDDIWAEQRRLEALKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLA 120
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRH 177
CSAELVLATHKT+TMLF AVLER GITAF+L KVI+SFIRHE+SLPRELRRH
Sbjct: 121 CSAELVLATHKTITMLFPAVLERTGITAFDLCKVIESFIRHEDSLPRELRRH 172
>gi|345290665|gb|AEN81824.1| AT3G12280-like protein, partial [Neslia paniculata]
Length = 172
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/172 (59%), Positives = 112/172 (65%), Gaps = 46/172 (26%)
Query: 52 MTTAKWLRTIICPLPSKPS----------------------------------------- 70
MTTAKWLR +ICPL KPS
Sbjct: 1 MTTAKWLRNVICPLLPKPSPGLEHFLKSCDRDITNDVTRRAHIILEAIFPNSSLGGQCGG 60
Query: 71 ADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
LQ +LMD+IWAEQRRLEALKL Y+VLE MC AEAQ+LHA NL SL FHRCMLA
Sbjct: 61 GSLQAVDLMDDIWAEQRRLEALKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLA 120
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRH 177
CSAELVLATHKT+TMLF AVLER GITAF+LSKVI+SFIRHE+SLPRELRRH
Sbjct: 121 CSAELVLATHKTITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRH 172
>gi|345290647|gb|AEN81815.1| AT3G12280-like protein, partial [Capsella grandiflora]
gi|345290649|gb|AEN81816.1| AT3G12280-like protein, partial [Capsella grandiflora]
gi|345290651|gb|AEN81817.1| AT3G12280-like protein, partial [Capsella grandiflora]
gi|345290655|gb|AEN81819.1| AT3G12280-like protein, partial [Capsella grandiflora]
Length = 172
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 102/172 (59%), Positives = 111/172 (64%), Gaps = 46/172 (26%)
Query: 52 MTTAKWLRTIICPLPSKPS----------------------------------------- 70
MTTAKWLR +ICPL KPS
Sbjct: 1 MTTAKWLRAVICPLLPKPSPGLEHFLKSCDRDITNDVTRRAHIILEAIFPNSSLGAQCGG 60
Query: 71 ADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
LQ +LMD+IWAEQRRLEALKL Y+VLE MC AEAQ+LHA NL SL FHRCMLA
Sbjct: 61 GSLQAVDLMDDIWAEQRRLEALKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLA 120
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRH 177
CSAELVLATHKT+TMLF AVLER GITAF+L KVI+SFIRHE+SLPRELRRH
Sbjct: 121 CSAELVLATHKTITMLFPAVLERTGITAFDLCKVIESFIRHEDSLPRELRRH 172
>gi|345290653|gb|AEN81818.1| AT3G12280-like protein, partial [Capsella grandiflora]
Length = 172
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/172 (59%), Positives = 111/172 (64%), Gaps = 46/172 (26%)
Query: 52 MTTAKWLRTIICPLPSKPS----------------------------------------- 70
MTTAKWLR +ICPL KPS
Sbjct: 1 MTTAKWLRAVICPLLPKPSPGLEHFLKSCDRDITNDVTRRAHIILEAIFPNSSLGAQCGG 60
Query: 71 ADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
LQ +LMD+IWAEQRRLEALKL Y+VLE MC AEAQ+LHA NL SL FHRCMLA
Sbjct: 61 GSLQXVDLMDDIWAEQRRLEALKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLA 120
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRH 177
CSAELVLATHKT+TMLF AVLER GITAF+L KVI+SFIRHE+SLPRELRRH
Sbjct: 121 CSAELVLATHKTITMLFPAVLERTGITAFDLCKVIESFIRHEDSLPRELRRH 172
>gi|118483575|gb|ABK93685.1| unknown [Populus trichocarpa]
Length = 108
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 91/110 (82%), Gaps = 4/110 (3%)
Query: 524 MSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNS 582
MSPKKVS+ H+VYVSPLR+S+MDALIS+SSKSYYACVGESTHAY SP KDL IN+RLN
Sbjct: 1 MSPKKVSSAHNVYVSPLRSSKMDALISNSSKSYYACVGESTHAYQSPSKDLNAINNRLNG 60
Query: 583 NRRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPEQLD 632
NR+ RG LN D+ DVGLVSDSMV NSL LQNG+ A+++ A LK EQ D
Sbjct: 61 NRKARGTLNLDN---DVGLVSDSMVANSLGLQNGNCASTSGAALKSEQSD 107
>gi|242075436|ref|XP_002447654.1| hypothetical protein SORBIDRAFT_06g011641 [Sorghum bicolor]
gi|241938837|gb|EES11982.1| hypothetical protein SORBIDRAFT_06g011641 [Sorghum bicolor]
Length = 251
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 120/198 (60%), Gaps = 19/198 (9%)
Query: 357 PTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLN 416
PT SNP GG E CA+ I I F KI KLAAVRI + ER+Q ++ E VY + L+
Sbjct: 52 PTVSNPVGGNEKCADLAIQIFFSKILKLAAVRIRNLCERVQ-HVELTERVYNVF-NHILD 109
Query: 417 QRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVFD----- 471
Q+T+LFFN HIDQ+ILCC YGVAK ++ L+F E++ NY ++ Q KP+VF +V+
Sbjct: 110 QQTTLFFNRHIDQLILCCLYGVAKACKVELSFNELL-NYYRKEQWKPEVFENVYIGSRNS 168
Query: 472 --------HVDIITFYNKIFAPTVKPLLVELGPVGTA--MKTNRDSEVNHNNDASVFP-A 520
HVDII FYNK+F P KP LV L GT K N + + S P
Sbjct: 169 NDVCTLVLHVDIIRFYNKVFVPAAKPFLVSLISSGTCPEEKKNASGPIPGSPKPSALPNN 228
Query: 521 LPDMSPKKVSATHSVYVS 538
LPDMS KKVSA+H+V VS
Sbjct: 229 LPDMSLKKVSASHNVCVS 246
>gi|255088904|ref|XP_002506374.1| retinoblastoma protein [Micromonas sp. RCC299]
gi|226521646|gb|ACO67632.1| retinoblastoma protein [Micromonas sp. RCC299]
Length = 1341
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 132/251 (52%), Gaps = 39/251 (15%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P + + F K+ +L+A R+ + ERL L + + Y L + L + TSL +N H
Sbjct: 1027 DPAVVNSLRVFFAKVMRLSARRLADLCERLSLPAALTQQSYALV-EHALYEHTSLLYNRH 1085
Query: 427 IDQIILCCFYGVAKISQ------LNLTFKEIIYNYGKQPQCKPQVFRSVF---------- 470
+DQ++LC YG K+++ + F+EIIY Y KQPQC+ +VF +V
Sbjct: 1086 LDQVLLCAVYGACKVNKDMLLKGRTVPFREIIYQYEKQPQCREEVFWTVILTQTDPELEV 1145
Query: 471 -DHVDIITFYNKIFAPTVKPLLVEL--------GPVGTAMKTNRDSEVNHNNDASVFPAL 521
DII FYNK+F P +K L+ L GP + MK+ N A+ L
Sbjct: 1146 KQQGDIIEFYNKVFVPEIKAFLLSLKSRSPASAGP--SPMKSPSGGPQTAN--AAPMSPL 1201
Query: 522 PD--MSPKKV--SATHSVYVSPLRTSEMDALISHS----SKSYYACVGESTHAY-SPFKD 572
P SP+ + +VYVSP+R+ + A ++ + SKS YA +GESTHAY SP +D
Sbjct: 1202 PAGLQSPRVMLGGIRQNVYVSPMRSDKALASLAGTFTPRSKSLYAFLGESTHAYQSPARD 1261
Query: 573 LTDINHRLNSN 583
L IN R++S+
Sbjct: 1262 LNFINRRISSS 1272
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 64/86 (74%)
Query: 119 FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHL 178
F R +LACS E+V+A++KT T+ F A+ +G+ AF++S +I+ F+R + ++PRE+++H
Sbjct: 770 FVRSVLACSMEVVVASYKTATLKFPAIPRLLGLDAFDVSSIIEPFVRADTTMPREVKKHF 829
Query: 179 NSLEERLLESMVWEKGSSMYNSLTVA 204
N+LEE ++E++ W KGSS++ + A
Sbjct: 830 NALEETIMETLAWSKGSSLFGFMRAA 855
>gi|303288323|ref|XP_003063450.1| retinoblastoma protein [Micromonas pusilla CCMP1545]
gi|226455282|gb|EEH52586.1| retinoblastoma protein [Micromonas pusilla CCMP1545]
Length = 1359
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 138/300 (46%), Gaps = 72/300 (24%)
Query: 347 KSKPLPPPLYPTRSNP-GGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRES 405
+ KPLP TR P G G+ A + I F K+ +L+A R+ + +RL L + +
Sbjct: 1010 RDKPLPTKF--TREKPPGAAGDVTARNSLRIFFAKVMRLSARRLADLCDRLSLPSSLTQQ 1067
Query: 406 VYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQ------LNLTFKEIIYNYGKQP 459
Y L + L TSL +N H+DQIILC YG K+++ + F++IIY+Y KQP
Sbjct: 1068 AYSLV-EHALYDNTSLLYNRHLDQIILCAVYGTCKVNKDGALKGKTVPFRDIIYHYQKQP 1126
Query: 460 QCKPQVFRS-----------VFDHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSE 508
QC+ +VF + V DII FYNK+F P VK L+ L P A + +++
Sbjct: 1127 QCREEVFWTVVMSQSDPELEVITQGDIIAFYNKVFVPAVKQFLLSLKP--QARVSCHETQ 1184
Query: 509 VNHNNDASVFP-----ALPD--MSPKK-VSAT---------HSVYVSPLRTSEMDALISH 551
DA+ P LP SP+K ++A +VYVSP+R H
Sbjct: 1185 ETAGADAATSPPASSAQLPVGLQSPRKQLTAVGTGPAGVINRNVYVSPMRGGAAARADLH 1244
Query: 552 S-------------------------------SKSYYACVGESTHAY-SPFKDLTDINHR 579
+ SKS +A VGESTHAY SP +DL IN R
Sbjct: 1245 AGGSVGPSPSPGGVPYVGAPGTPLPLGAMTPGSKSLFAFVGESTHAYASPAQDLAFINQR 1304
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 67/89 (75%)
Query: 116 TSLFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELR 175
+S F R +L+C+AE+V+A++KT T+ F A+ +G+ AF++S VI+ F+R + ++PRE++
Sbjct: 793 SSRFVRSVLSCAAEVVVASYKTATLKFPAIPTLLGLDAFDVSNVIEPFVRADATMPREIK 852
Query: 176 RHLNSLEERLLESMVWEKGSSMYNSLTVA 204
+H N++EE+++E M W +GS++ + + A
Sbjct: 853 KHFNAIEEKIMEHMAWRRGSTLLSFMIAA 881
>gi|145354724|ref|XP_001421627.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581865|gb|ABO99920.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1002
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 133/264 (50%), Gaps = 31/264 (11%)
Query: 347 KSKPLPPPLYPTRSN---PGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIR 403
+ +PLP R++ G + CA + + F K+ LAA R+ + RL LS +
Sbjct: 716 RGEPLPVRFAAVRNHTVEQPSGCDVCAFKALRMFFAKVMHLAARRLGDLASRLNLSTDVT 775
Query: 404 ESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAK----ISQLNLTFKEIIYNYGKQP 459
+Y L + + ++T+L +N HIDQIIL YGV K IS +L FK+IIY Y KQP
Sbjct: 776 RDIYALI-EHVVYEQTNLVYNRHIDQIILVSVYGVCKASAGISSNSLQFKDIIYQYSKQP 834
Query: 460 QCKPQVFRS-----------VFDHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSE 508
Q ++F + V + DII+FYNK+F VK L+ L TN D++
Sbjct: 835 QSSEEIFWAVVLEQNDPELEVVNRGDIISFYNKVFVGRVKEFLLTLRERPARDTTNLDTD 894
Query: 509 VN-HNNDASVFPALPD--MSPKKV--SATHSVYVSPLRTSEMDALISHS------SKSYY 557
N SV ALP SP++ ++YVSP+R + +++ ++S +
Sbjct: 895 GGEQGNTVSVDDALPFGLSSPRRRLPIDNQNIYVSPMRPERVASMLHEGAPPTPRTRSLF 954
Query: 558 ACVGESTHAY-SPFKDLTDINHRL 580
A +GES +AY SP D IN +L
Sbjct: 955 ATIGESVYAYTSPSSDFEAINRKL 978
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 117/256 (45%), Gaps = 69/256 (26%)
Query: 13 TGAKRKFDSLASPVKTITSPL-----SPHHS-------STSKMVVTPVSTAMTTAKWLRT 60
T A+RK + SP++ P+ SP HS + TP+S AM +A WL+
Sbjct: 364 TPARRKRVAPFSPIRPKKIPIHGVPPSPMHSLRGIMASGVGGVAATPISQAMASASWLQD 423
Query: 61 IIC---PLPSKPSADLQG------------------------------------------ 75
++C L +K +A+LQ
Sbjct: 424 VVCGSSDLETK-TAELQRFVPDNPEIVQALKKKVTNFGQRIGQAIREDALVTTMRTDISP 482
Query: 76 -ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAK----NLTSL-----FHRCMLA 125
+ +MD + +QR E + + L + E + + N T+L F + ++
Sbjct: 483 HSTVMDEL-VKQRTSEVSHVFFYFLNRILKDELERIAGDKKDVNFTTLLASDRFTKSLVT 541
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V++T+KT T+ F A +GI F+L+ +I+ F+R + S+PRE++RH NSLEE+
Sbjct: 542 CCMEVVVSTYKTSTLAFPATTHLMGIHPFDLATIIEPFVRADMSMPREIQRHFNSLEEKT 601
Query: 186 LESMVWEKGSSMYNSL 201
LE + W KGS+++ L
Sbjct: 602 LERLAWCKGSTLFEFL 617
>gi|432952925|ref|XP_004085246.1| PREDICTED: retinoblastoma-like protein 1-like, partial [Oryzias
latipes]
Length = 882
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 124/497 (24%), Positives = 218/497 (43%), Gaps = 87/497 (17%)
Query: 43 MVVTPVSTAMTTAKWLRTIICPLPSKPSADLQ---------------------GANLMDN 81
++VTPVS+A + L++++ L + PS +L G ++
Sbjct: 381 LLVTPVSSATQSVSRLQSMVAGLRTAPSENLMQIFRTCSRDPTGSVLARVKTLGQTFKEH 440
Query: 82 I-------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCM 123
+AE R A L YKVLE + E + L +++++L FH +
Sbjct: 441 YTNDSEDTPGSHIDFAENRLKLAEILYYKVLENVLVQETKRLQGRDMSALLEQDIFHCSL 500
Query: 124 LACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEE 183
+AC E+VL ++ + F +++ + F KVI+ FIR EE L R++ +HLNS+EE
Sbjct: 501 MACCLEVVLFSYSS-QRTFPWIIDVFKLAPFYFFKVIEVFIRSEEGLSRDMVKHLNSIEE 559
Query: 184 RLLESMVWEKGSSMYNSLTVARPALSAEINLGFTDILFQDSQDSWE-------------- 229
++LES W + S+++++L A + + + F+ L S + +
Sbjct: 560 QVLESRAWTEDSALWSALKAAGNEVPSVEEVNFSSCLDSGSSNGIQPHLPLAAHSPIIHP 619
Query: 230 ---EFTSIL-----TVPPT--------DSPTRQHYENLPWWKEPFTEVDSIFLLIPMPSL 273
EF + L VPP+ SP + + +P S+ L P L
Sbjct: 620 RIREFRAGLGSARKEVPPSPLSVHDRYSSPAAGSAKRRLFGDDP--PAPSVGLTSPAGPL 677
Query: 274 DAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELVTDDYRSVLVERNNFT 333
+ A + FSS G + + + + V S + TD +++ + +
Sbjct: 678 PSPAKKLTFSSSGSTTLKIGGQGAQTTVVS-------------MSTDRTFTLIPVSSCDS 724
Query: 334 SLVKDCLLGLNNLKSKPLPPPLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMV 393
S V L + S+P T G G P + + F K+ LA+VR+ +
Sbjct: 725 SGVVTAQFLLTSSPSRPAAAVAMTTEPY-TGSGRPRRTGSLALFFRKVYHLASVRLRDLC 783
Query: 394 ERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIY 453
+L +S ++R ++ C + +L T L N H+DQ++LC Y ++KI++ TF++I+
Sbjct: 784 MKLDVSSELRGKIWT-CFEHSLVHCTDLMKNRHLDQLLLCSIYIISKITKETHTFQDIMK 842
Query: 454 NYGKQPQCKPQVFRSVF 470
Y QPQ V+RSV
Sbjct: 843 CYRSQPQASSYVYRSVL 859
>gi|384254177|gb|EIE27651.1| hypothetical protein COCSUDRAFT_55641 [Coccomyxa subellipsoidea
C-169]
Length = 1179
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 92/148 (62%), Gaps = 8/148 (5%)
Query: 65 LPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----F 119
P +P D +++ R E +KL ++VLE M AE N TSL F
Sbjct: 480 FPPQPDQDTVTLGVLNGAHVSPRGAEGVKLYFRVLEGMLKAEQDRTGRTNFTSLLASTQF 539
Query: 120 HRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRH---EESLPRELRR 176
++C+ C+ E+V+A+++ VT F AVLER+ ++AF++SK++ +F+RH + +PREL+R
Sbjct: 540 NKCLAGCAFEVVIASYRMVTHAFPAVLERLQLSAFDMSKLVGTFVRHISPADQVPRELKR 599
Query: 177 HLNSLEERLLESMVWEKGSSMYNSLTVA 204
HL S+EE++LE WE+GSS+Y LT A
Sbjct: 600 HLFSIEEKILEQQAWERGSSLYPLLTSA 627
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 136/310 (43%), Gaps = 49/310 (15%)
Query: 360 SNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLS----QQIRESVYCLCPKRTL 415
PG G E ++ K+ KLAA+RIN + +RL QI V+ + +
Sbjct: 783 GRPGEGLERPGRAVVSDFLNKVLKLAALRINDICDRLDFEPLDRSQIVSQVFTMV-SHVV 841
Query: 416 NQRTSLFFNCHIDQIILCCFYGVAKISQL-NLTFKEIIYNYGKQPQCKPQVFRSVFDHV- 473
T L + H+DQ+ILC YGV K++QL N+TFK+II +Y KQ Q K +FR+V +
Sbjct: 842 TDHTGLLYGRHLDQVILCALYGVCKVNQLKNITFKDIITHYKKQAQAKNSIFRTVSIQLT 901
Query: 474 ---------DIITFYNKIFAPTVKPLLVELG-------------------PVGTAMKTNR 505
D+I FYN +F P K L++LG +GT +
Sbjct: 902 PDLQVVKTGDVIEFYNAVFIPATKSFLLQLGNKTAPLATLPTLSVPATPLRLGTPLGPRS 961
Query: 506 -DSEVNHNNDASVFPALPDMSPKKVSATHS-VYVSPLRTSEMDA--LISHSSKSYYACVG 561
+ H+ + L SP + V VSP+R S L S S + A +G
Sbjct: 962 FSTPPAHDRLGAPGAFLGGASPALLGTPGGKVLVSPMRQSPSQQVFLGSRSHSLFSARMG 1021
Query: 562 ESTHAY-SPFKDLTDINHRLNSNRRVR-GALNFDDVDVDVGL--------VSDSMVVNSL 611
EST AY SP KDL+ IN RL R G + D + L V + VV L
Sbjct: 1022 ESTAAYQSPSKDLSFINCRLQQRHPFRAGPPDADGAGPAIVLQTLDPNSAVGHTPVVQPL 1081
Query: 612 YLQNGSAAAS 621
NG +S
Sbjct: 1082 PFANGGGPSS 1091
>gi|308812744|ref|XP_003083679.1| retinoblastoma protein (IC) [Ostreococcus tauri]
gi|116055560|emb|CAL58228.1| retinoblastoma protein (IC) [Ostreococcus tauri]
Length = 962
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 128/279 (45%), Gaps = 48/279 (17%)
Query: 348 SKPLPPPLYPTRSNPGG-------------------GGEPCAETGINICFCKINKLAAVR 388
S PL P R PGG G + CA + I F K+ +LAA R
Sbjct: 665 SSPLRGATTPRRKLPGGQPLPERFAAVRNHDVEQPIGCDVCAFKALQIFFAKVMQLAARR 724
Query: 389 INAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKIS---QLN 445
+ + RL+LS ++ VY L + + ++T+L +N H+DQIIL YGV K++
Sbjct: 725 LGDLASRLKLSPEVTRDVYALI-EHVIYEQTNLVYNRHVDQIILASVYGVCKVNGGCGGA 783
Query: 446 LTFKEIIYNYGKQPQCKPQVFRSVF-----------DHVDIITFYNKIFAPTVKPLLVEL 494
+ FK+IIY Y KQPQC ++F +V DII+FYNK+F V+ L+ L
Sbjct: 784 VQFKDIIYQYSKQPQCTEEIFWTVVIEQTDPELEVSTRGDIISFYNKVFVSRVRTFLLAL 843
Query: 495 GPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKV--SATHSVYVSPLRTSEMDALISHS 552
A+ + ++ + FP SP++ ++YVSP+R A++ +
Sbjct: 844 RERAEALAAQKTTDGEKVSVDEPFP-FGISSPRRRLPVENQNIYVSPMRPEREAAMLQDA 902
Query: 553 S----------KSYYACVGESTHAY-SPFKDLTDINHRL 580
+ +S +A +GES H S D IN L
Sbjct: 903 AVQGEPSTPRTRSLFATIGESIHGDPSSANDFEAINKHL 941
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 108/228 (47%), Gaps = 56/228 (24%)
Query: 24 SPVKTITSPLSPHHSSTSKMVVTPVSTAMTTAKWLRTIICP--------------LPSKP 69
SP++ I PL + TP+S AM +A WL+ I+C +P +
Sbjct: 365 SPMRAIRGPLP-----AGVVPPTPISQAMASASWLQDIVCASSDLETKLAELRRFVPGEE 419
Query: 70 SA--------DLQGANL-----------------------MDNIWAEQRRLEALKLNYKV 98
+ D+ G L MD + QR E + + +
Sbjct: 420 TVIDKLHKKVDVLGQRLGQAIREDALVTTMRTDISPHSMVMDEL-VRQRTTELVHIFFFF 478
Query: 99 LETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITA 153
L + AE+QV N+ +L F + +LAC E+++AT+KT T+ F A +GI
Sbjct: 479 LNRILRAESQVKKDANIVALLQSSRFTKSLLACCMEVIVATYKTSTLTFPATTHLLGIHP 538
Query: 154 FNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
F+L+ +I+ F+R + LPRE+ RH NSLEE+ LE + W KGS++++ L
Sbjct: 539 FDLTTIIEPFVRADMDLPREIVRHFNSLEEKTLERLAWCKGSALFDFL 586
>gi|55978008|gb|AAV68604.1| retinoblastoma protein [Ostreococcus tauri]
Length = 987
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 128/279 (45%), Gaps = 48/279 (17%)
Query: 348 SKPLPPPLYPTRSNPGG-------------------GGEPCAETGINICFCKINKLAAVR 388
S PL P R PGG G + CA + I F K+ +LAA R
Sbjct: 690 SSPLRGATTPRRKLPGGQPLPERFAAVRNHDVEQPIGCDVCAFKALQIFFAKVMQLAARR 749
Query: 389 INAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKIS---QLN 445
+ + RL+LS ++ VY L + + ++T+L +N H+DQIIL YGV K++
Sbjct: 750 LGDLASRLKLSPEVTRDVYALI-EHVIYEQTNLVYNRHVDQIILASVYGVCKVNGGCGGA 808
Query: 446 LTFKEIIYNYGKQPQCKPQVFRSVF-----------DHVDIITFYNKIFAPTVKPLLVEL 494
+ FK+IIY Y KQPQC ++F +V DII+FYNK+F V+ L+ L
Sbjct: 809 VQFKDIIYQYSKQPQCTEEIFWTVVIEQTDPELEVSTRGDIISFYNKVFVSRVRTFLLAL 868
Query: 495 GPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKV--SATHSVYVSPLRTSEMDALISHS 552
A+ + ++ + FP SP++ ++YVSP+R A++ +
Sbjct: 869 RERAEALAAQKTTDGEKVSVDEPFP-FGISSPRRRLPVENQNIYVSPMRPEREAAMLQDA 927
Query: 553 S----------KSYYACVGESTHAY-SPFKDLTDINHRL 580
+ +S +A +GES H S D IN L
Sbjct: 928 AVQGEPSTPRTRSLFATIGESIHGDPSSANDFEAINKHL 966
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 108/228 (47%), Gaps = 56/228 (24%)
Query: 24 SPVKTITSPLSPHHSSTSKMVVTPVSTAMTTAKWLRTIICP--------------LPSKP 69
SP++ I PL + TP+S AM +A WL+ I+C +P +
Sbjct: 390 SPMRAIRGPLP-----AGVVPPTPISQAMASASWLQDIVCASSDLETKLAELRRFVPGEE 444
Query: 70 SA--------DLQGANL-----------------------MDNIWAEQRRLEALKLNYKV 98
+ D+ G L MD + QR E + + +
Sbjct: 445 TVIDKLHKKVDVLGQRLGQAIREDALVTTMRTDISPHSMVMDEL-VRQRTTELVHIFFFF 503
Query: 99 LETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITA 153
L + AE+QV N+ +L F + +LAC E+++AT+KT T+ F A +GI
Sbjct: 504 LNRILRAESQVKKDANIVALLQSSRFTKSLLACCMEVIVATYKTSTLTFPATTHLLGIHP 563
Query: 154 FNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
F+L+ +I+ F+R + LPRE+ RH NSLEE+ LE + W KGS++++ L
Sbjct: 564 FDLTTIIEPFVRADMDLPREIVRHFNSLEEKTLERLAWCKGSALFDFL 611
>gi|297592141|gb|ADI46925.1| MAT3m [Volvox carteri f. nagariensis]
Length = 1113
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 105/186 (56%), Gaps = 7/186 (3%)
Query: 23 ASPVKTITSPLSPHHSSTSKMVVTPVSTAMTTAKWLRTIICPL-PSKPSADLQGA-NLMD 80
A P +T L+ + S+ V STA + +R +I + P + L GA L+
Sbjct: 445 AEPSPGLTRYLAAVGGTRSEYVTGSASTAHQLGQRVRDLISSIIPEEKIPSLVGAFPLLQ 504
Query: 81 NIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATH 135
+RRLE KL Y L+ + E +V +TSL FHR ++AC E+V A +
Sbjct: 505 PSLTAERRLEVTKLYYHSLDNILHTEEKVGGMAGVTSLLSAGKFHRALVACCIEVVAACY 564
Query: 136 KTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGS 195
+ V+ F VL+ + I AF+L+K+I SF++ E+LPREL+RHL +EE+++ES+ WE GS
Sbjct: 565 RMVSCAFPKVLDALHIKAFDLAKMIPSFVKSIETLPRELKRHLFLIEEKIIESLAWEPGS 624
Query: 196 SMYNSL 201
S+Y +
Sbjct: 625 SLYTHI 630
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 26/137 (18%)
Query: 378 FC-KINKLAAVRINAM--------VERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHID 428
FC K+ KLAA R+ M ++R++++ ++ E++ + L +T LF+N HID
Sbjct: 774 FCRKVLKLAAFRLALMCDNFDFSPLDRVEVNAKVYETI-----EYALYNQTHLFYNRHID 828
Query: 429 QIILCCFYGVAKISQL-NLTFKEIIYNYGKQPQCKPQVFRSVF-----------DHVDII 476
QIIL YG K+ +L ++F+EII +Y KQPQ + +FRSV DII
Sbjct: 829 QIILSALYGYCKVHKLVQVSFREIIGHYRKQPQAQQCIFRSVIIEQSNPGLQVSTRADII 888
Query: 477 TFYNKIFAPTVKPLLVE 493
FYN++F P++K L++
Sbjct: 889 AFYNQVFVPSMKSFLLK 905
>gi|219362811|ref|NP_001137012.1| uncharacterized protein LOC100217179 [Zea mays]
gi|194697978|gb|ACF83073.1| unknown [Zea mays]
Length = 109
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 76/100 (76%), Gaps = 9/100 (9%)
Query: 524 MSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNS 582
MSPKKVSATH+VYVSPLR+S+MD L+S S KSYYACVGEST+A+ SP KDL IN+RLNS
Sbjct: 1 MSPKKVSATHNVYVSPLRSSKMDTLLSPSPKSYYACVGESTYAFQSPSKDLKAINNRLNS 60
Query: 583 NRRVRGALNFDDVDVDVGLVSDSMVVNSLY-LQNGSAAAS 621
++V G LNFD +VSD +V +SL +QN AA+
Sbjct: 61 WKKVSGRLNFD-------IVSDLVVASSLNGVQNAKPAAT 93
>gi|194696912|gb|ACF82540.1| unknown [Zea mays]
Length = 110
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/114 (55%), Positives = 79/114 (69%), Gaps = 11/114 (9%)
Query: 524 MSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNS 582
MSPKKVSATH+VYVSPLR+S+MD L+S SSKSYYACVGEST+A+ SP KDL IN+RLNS
Sbjct: 1 MSPKKVSATHNVYVSPLRSSKMDTLLSPSSKSYYACVGESTYAFQSPSKDLKAINNRLNS 60
Query: 583 ---NRRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPEQLDP 633
++V G LNFD +VSD +V +SL + A+ A P + +P
Sbjct: 61 VSGGKKVSGRLNFD-------VVSDLVVASSLGSDRDAKPAADPAKTTPVKCEP 107
>gi|121077851|gb|ABM47317.1| retinoblastoma-related protein [Volvox carteri f. nagariensis]
gi|169626712|gb|ACA58120.1| retinoblastoma-related protein 1 [Volvox carteri f. nagariensis]
gi|297592069|gb|ADI46854.1| MAT3f [Volvox carteri f. nagariensis]
Length = 1107
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 129/274 (47%), Gaps = 68/274 (24%)
Query: 3 GSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHSSTSKM--------VVTPVSTAMTT 54
GSL G + T + S +P TS L+ HS K+ VTPVS M+T
Sbjct: 382 GSLLGPGAHTTASYAISPSSMNPK---TSLLARMHSPLPKLNLGVETGPPVTPVSEIMST 438
Query: 55 AKWLRTIICPLPSKPSADL--------------QGA-----------------NLMDNIW 83
+ WLR I L ++PS + QGA L+ I
Sbjct: 439 SAWLRGITASLAAEPSPSVMRYLAEVAVPPDGEQGACVTVTLSAAEQLNQRVQELVSCIM 498
Query: 84 AEQ-------------------RRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----F 119
E+ RR+E K+ Y LE + AE + +TSL F
Sbjct: 499 PEEKIPSLLGSFPLLQPSLVSERRIEVTKVYYLSLERILQAEEKNNGVAGVTSLLSAGKF 558
Query: 120 HRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLN 179
HR ++ACSAE+V A ++ V+ F VL+ + I AF+L+K+IQ F+R +LPR+L+RHL
Sbjct: 559 HRALVACSAEVVTACYRMVSCTFPKVLDALHIKAFDLAKMIQCFVRSITTLPRDLKRHLF 618
Query: 180 SLEERLLESMVWEKGSSMYNSL--TVARPALSAE 211
+EE++LES+ WE S +Y+ + TVA+ L E
Sbjct: 619 LVEEKILESLAWEADSPLYSLICSTVAQDELLEE 652
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 33/207 (15%)
Query: 353 PPLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAM--------VERLQLSQQIRE 404
PP + + CA + C CK+ KLAA R+ + ++RL ++ ++ +
Sbjct: 718 PPCIGAKFVESAHTDGCAAALNHFC-CKVLKLAAFRLAVLCDNFDFSPLQRLDVNTKVYQ 776
Query: 405 SVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQL-NLTFKEIIYNYGKQPQCKP 463
++ + L +T LF+N HIDQIIL YG K+ +L ++F+EII +Y KQPQ +P
Sbjct: 777 TI-----EHALFFQTHLFYNRHIDQIILSALYGFCKVHRLAQVSFREIIAHYRKQPQAQP 831
Query: 464 QVFRSVF-----------DHVDIITFYNKIFAPTVKPLLVELGP------VGTAMKTNRD 506
+FRSV DII FYN++F P +K L+ G +G + + +
Sbjct: 832 SIFRSVVVEQSNPSLQVGRRADIIAFYNQVFVPCMKSFLLRSGKGEYPGTIGPTIGSPDN 891
Query: 507 SEVNHNNDASVFPALPDMSPKKVSATH 533
D S+ P M ++SA H
Sbjct: 892 VTGELKGDISISCGAPAME-GELSAAH 917
>gi|412985248|emb|CCO20273.1| predicted protein [Bathycoccus prasinos]
Length = 1368
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 82/140 (58%), Gaps = 16/140 (11%)
Query: 370 AETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQ 429
A+ +++ F K+ +LAAVR+ + RL ++Q++ + +C + + ++TSL +N H+DQ
Sbjct: 1062 AKASLDVFFAKVLRLAAVRLADICARLHVNQEVTRRAFQIC-EFVVFEKTSLLYNRHLDQ 1120
Query: 430 IILCCFYGVAKIS----QLNLTFKEIIYNYGKQPQCKPQVFRS-----------VFDHVD 474
IIL YG KI+ N+ FK+I+Y Y KQPQC +VF S V D
Sbjct: 1121 IILASIYGACKIASSEQDRNVKFKDIVYRYHKQPQCVEEVFWSCPLTVTNPGLEVVSRGD 1180
Query: 475 IITFYNKIFAPTVKPLLVEL 494
II FYNK F P V+P +++L
Sbjct: 1181 IIAFYNKQFVPNVRPFMLQL 1200
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 135 HKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKG 194
++ +T+ F A+ IG+ AF++ I+ F+R +PRE+R + +EE +LE + W+K
Sbjct: 764 NRAITLRFPAIPNAIGLNAFDVLNGIEPFVRSRPEMPREIRAYFGRIEESMLEKLSWKKD 823
Query: 195 SSMYNSLTVARPALSA-EINLGFT 217
SS+Y L VA A + N+G T
Sbjct: 824 SSLYPLLRVATTKSGAKKKNIGET 847
>gi|307107595|gb|EFN55837.1| expressed protein [Chlorella variabilis]
Length = 1002
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 80/125 (64%), Gaps = 7/125 (5%)
Query: 87 RRLEALKLNYKVLETMCTAEAQVLHAKNLTSLF-------HRCMLACSAELVLATHKTVT 139
RR + L+L ++VL+++ AEA A + HRC+ AC+ E V+++++ V
Sbjct: 237 RRSQGLRLYWRVLQSLVAAEAGRPDAGPAAAAALLAAPLLHRCVAACALECVISSYRMVN 296
Query: 140 MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 199
+ F AVLER+ + AF+L K ++ F+ +LPR+L+RH+ ++EER LES+ W +GSS+Y
Sbjct: 297 LAFPAVLERLSLPAFDLCKAVEPFVHALPTLPRDLKRHMLAVEERCLESLAWAQGSSLYP 356
Query: 200 SLTVA 204
+L A
Sbjct: 357 TLIAA 361
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 44/160 (27%)
Query: 366 GEPCAETGINICFCKINKLAAVRINAMVERLQ---------LSQQIRESVYCLCPKR--- 413
G+ A + +N ++ KLAA+R+ ++ RL L++ R L +
Sbjct: 541 GDRSARSAVNKFLRRVLKLAAIRLADLLSRLDTHPADPHVLLAEVRRRQGAGLGLAKAGL 600
Query: 414 -----------TLNQ-----RTSLFFNCHIDQIILCCFYGVAKISQLN-LTFKEIIYNYG 456
TL Q +T L + H+DQ +LCC Y V K+ QL +FK II Y
Sbjct: 601 GLAHSGGIAAFTLAQHVAFEQTWLLYGRHLDQALLCCLYSVCKLHQLGQASFKAIIAAYK 660
Query: 457 KQPQCKPQVFRSV----FDH-----------VDIITFYNK 481
+Q Q + F+SV +H DIITFYN+
Sbjct: 661 QQAQAQADTFKSVSMRPREHTTLHQLHPTATADIITFYNQ 700
>gi|313225294|emb|CBY06768.1| unnamed protein product [Oikopleura dioica]
Length = 888
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 116/231 (50%), Gaps = 29/231 (12%)
Query: 374 INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILC 433
+ + + KI L RI + +RL+LS+ I E ++ + + L ++ +F + H+DQIILC
Sbjct: 639 MQLFYRKIYLLVTRRIQHISQRLRLSKNITEYIFTVF-EHCLTKKREIFLDRHVDQIILC 697
Query: 434 CFYGVAKIS--QLNLTFKEIIYNYGKQPQCKPQVFRSVF---------DHVDIITFYNKI 482
C Y V KI+ + + F EI+ Y QPQCK +V+RSV + DI FYN +
Sbjct: 698 CVYIVGKIANPRDGIKFMEILSAYRYQPQCKSRVYRSVRTASTSAKCSERGDITKFYNAV 757
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRT 542
FAP V EL R + N S P + + SP+++S+ HS+++SP +
Sbjct: 758 FAPLVGTFSTELV---------RQAGFNAGVPLSPLP-MSNFSPRRLSSKHSIFISPAKC 807
Query: 543 SEMDALIS----HSSKSYYACVGESTHAYSPFKDLTD-INHRLNSNRRVRG 588
+ L++ H K + +S + S F + + I+ S +R RG
Sbjct: 808 KRI--LLTPESIHVGKKIEFLLDQSPNRRSEFSSINEMISGVTGSAKRKRG 856
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 11/118 (9%)
Query: 93 KLNYKVLETMCTAEA-QVLHAKNLTSLFHR-----CMLACSAELVLATHKTVTMLFLAVL 146
KL ++ LE++ E +V + + L + +LA S E+ L ++ + F +L
Sbjct: 449 KLFWRFLESILLEERDRVGQLSDFSFLLEKPIVINSILALSVEITLWSYSSHDN-FQNIL 507
Query: 147 ERIGITAFNLSKVIQSFIRHEES----LPRELRRHLNSLEERLLESMVWEKGSSMYNS 200
+ + I KVI+ +R + LPR++ +HL +EER+LE + W+ S ++ +
Sbjct: 508 KTLNIVPIEFYKVIELILRADLGSGLRLPRDVVKHLAFIEERILEELSWDNKSPLWKN 565
>gi|449269638|gb|EMC80395.1| Retinoblastoma-like protein 1, partial [Columba livia]
Length = 1005
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTA 105
+PV + M+ K + C ++ +A+ G+++ +A R A L YK+LET+
Sbjct: 371 SPVGSVMSRVKEIGETFCRSYTQSTAEQPGSHI---DFAVNRFKLAEILYYKILETIMVQ 427
Query: 106 EAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVI 160
E + LH K+LT+L FHR ++AC E+VL + + F ++E + + F+ KVI
Sbjct: 428 ETRRLHGKDLTALLEQDVFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLDLRPFHFYKVI 486
Query: 161 QSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
+ IR EE L R++ +HLNS+EE++LES+ W + S+++++L +
Sbjct: 487 EVLIRSEEGLSRDMVKHLNSIEEQILESLAWTRDSALWSALQAS 530
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 119/283 (42%), Gaps = 73/283 (25%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
+P + + + K+ LA+VR+ + +L +S +R ++ C + TL L
Sbjct: 711 AASKPRRTGSLALFYRKVYHLASVRLRDLCLKLDVSNDLRRKIWT-CFEFTLVHCADLMK 769
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------- 470
+ H+DQ++LC FY +AK+++ TF++I+ +Y QPQ V+RSV
Sbjct: 770 DRHLDQLLLCAFYIMAKVTKEERTFQDIMKSYRNQPQANSHVYRSVLLKSVSADAQLDKN 829
Query: 471 ---------------------------------DHVDIITFYNKIFAPTVKPLLVELGPV 497
+ D+I FYN ++ VK ++
Sbjct: 830 AKQDVEMREESPVETGGSSGQSAAESSSELETEERGDLIKFYNAVYVARVKSFALKYD-- 887
Query: 498 GTAMKTNRDSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHS 552
TN+D H DA S FP + SP+++S HS+YVSP + A ++
Sbjct: 888 ----VTNQD----HVVDAPPLSPFPHIKQQAGSPRRISQQHSLYVSPHKNG---ACLTPR 936
Query: 553 SKSYYACVGESTHAYSPFKDLTDINH--RLNSNRRVRGALNFD 593
S Y G SP K L DIN+ + +R + A+ D
Sbjct: 937 SALMYKFSG------SPSKSLKDINNMIKQGEHRSKKRAITID 973
>gi|326931679|ref|XP_003211954.1| PREDICTED: retinoblastoma-like protein 1-like [Meleagris gallopavo]
Length = 982
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 94/164 (57%), Gaps = 9/164 (5%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTA 105
+P + M + + C ++P+ +L G+++ +A R A L YK+LET+
Sbjct: 334 SPAESIMNRVREIGEAFCHSYTQPTDELPGSHI---DFAVNRLKLAEILYYKILETIMVQ 390
Query: 106 EAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVI 160
E + LH K++T+L FHR ++AC E+VL + + F ++E + + F KVI
Sbjct: 391 EMRRLHGKDMTALLEQDVFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLDLRPFYFYKVI 449
Query: 161 QSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
+ IR EE L R++ +HLNS+EE++LES+ W + S+++ +L +
Sbjct: 450 EVLIRSEEGLSRDMVKHLNSIEEQILESLAWTRDSALWTALQAS 493
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 117/295 (39%), Gaps = 90/295 (30%)
Query: 365 GGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFN 424
G +P + + + K+ LA+VR+ + +L +S +R ++ C + TL L +
Sbjct: 680 GNKPKKTGSLALFYRKVYHLASVRLRDLCLKLDVSNDLRRKIWT-CFEFTLVHCADLMKD 738
Query: 425 CHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-------------- 470
H+DQ++LC FY +AK+++ TF++I+ +Y QPQ V+RSV
Sbjct: 739 RHLDQLLLCAFYIMAKVTKEERTFQDIMKSYRNQPQANSHVYRSVLLRNTSASVLLERNA 798
Query: 471 --------------------------------DHVDIITFYNKIFAPTVKPLLVELGPVG 498
+ D+I FYN ++ VK ++
Sbjct: 799 NQDVQMTEDSSVKSGNSLGRSAAENSTELGMEERGDLIKFYNAVYVGRVKSFALKYDIA- 857
Query: 499 TAMKTNRDSEVNHNNDASVFPALP------------------DMSPKKVSATHSVYVSPL 540
N D V ALP +SP+++S HSVYVSP
Sbjct: 858 -------------NQDHVVISALPIXXXXXXXXXXXXSIKQQPVSPRRISQQHSVYVSPH 904
Query: 541 RTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINH--RLNSNRRVRGALNFD 593
+ S A ++ + Y G SP K L DIN+ + +R + A+ D
Sbjct: 905 KNS---ACLTPRTALLYKFSG------SPSKSLKDINNMIKQGEHRSKKRAITID 950
>gi|363741428|ref|XP_417312.3| PREDICTED: retinoblastoma-like protein 1 [Gallus gallus]
Length = 1061
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 93/163 (57%), Gaps = 9/163 (5%)
Query: 47 PVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAE 106
P + + + + C ++P+ +L G+++ +A R A L YK+LET+ E
Sbjct: 422 PAESIVNRVREIGETFCRSYTQPTDELPGSHI---DFAVNRLKLAEILYYKILETIMVQE 478
Query: 107 AQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQ 161
+ LH K++T+L FHR ++AC E+VL + + F ++E + + F KVI+
Sbjct: 479 MRRLHGKDMTALLEQDVFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLDLRPFYFYKVIE 537
Query: 162 SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
IR EE L R++ +HLNS+EE++LES+ W + S+++ +L +
Sbjct: 538 VLIRSEEGLSRDMVKHLNSIEEQILESLAWTRDSALWTALQAS 580
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 120/279 (43%), Gaps = 67/279 (24%)
Query: 365 GGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFN 424
G +P + + + K+ LA+VR+ + +L +S +R ++ C + TL L +
Sbjct: 768 GNKPKKTGSLALFYRKVYHLASVRLRDLCLKLDVSNDLRRKIWT-CFEFTLVHCADLMKD 826
Query: 425 CHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-------------- 470
H+DQ++LC FY +AK+++ TF++I+ +Y QPQ V+RSV
Sbjct: 827 RHLDQLLLCAFYIMAKVTKEERTFQDIMKSYRNQPQANSHVYRSVLLRNTSANVLLDRNA 886
Query: 471 --------------------------------DHVDIITFYNKIFAPTVKPLLVELGPVG 498
+ D+I FYN ++ VK ++
Sbjct: 887 NQDVQMTEDSSVKTGNSLGRSAAENSTELGTEERGDLIKFYNAVYVGRVKSFALKYD--- 943
Query: 499 TAMKTNRDSEVNHNNDASVFPALPD--MSPKKVSATHSVYVSPLRTSEMDALISHSSKSY 556
TN+D V S FP++ +SP+++S HSVYVSP + A ++ +
Sbjct: 944 ---ITNQD-HVMEAPPLSPFPSIKQQPVSPRRISQQHSVYVSPHKNG---ACLTPRTALL 996
Query: 557 YACVGESTHAYSPFKDLTDINH--RLNSNRRVRGALNFD 593
Y G SP K L DIN+ + +R + A+ D
Sbjct: 997 YKFNG------SPSKSLKDINNMIKQGEHRSKKRAITID 1029
>gi|449486109|ref|XP_004175454.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 1
[Taeniopygia guttata]
Length = 1048
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 95/164 (57%), Gaps = 9/164 (5%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTA 105
+P+ + M+ K + C ++ S D Q + +D +A R A L YK+LET+
Sbjct: 413 SPLESIMSRVKEIGETFCCSYTQ-STDEQPGSHID--FAVNRLKLAEILYYKILETIMVQ 469
Query: 106 EAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVI 160
E + LH K+LT+L FHR +LAC E+VL + + F ++E + + F KVI
Sbjct: 470 ETRRLHGKDLTALLEQDLFHRSLLACCLEIVLFAYSS-PRTFPWIIEVLDLKPFYFYKVI 528
Query: 161 QSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
+ IR EE L R++ +HLNS+EE++LE++ W + S+++++L +
Sbjct: 529 EVLIRSEEGLSRDMVKHLNSIEEQILENLAWTRHSALWDALEAS 572
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 120/275 (43%), Gaps = 62/275 (22%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
+P + + + K+ LA+VR+ + +L +S + ++ C + TL L
Sbjct: 759 AASKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNDLCRKIWT-CFEFTLVHCADLMK 817
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-----DHV----- 473
+ H+DQ++LC FY +AK+++ TF++I+ +Y QPQ V+RSV D V
Sbjct: 818 DRHLDQLLLCAFYIMAKVTKEERTFQDIMKSYRNQPQANSHVYRSVLLRSTSDDVPLDKN 877
Query: 474 -------------------------------DIITFYNKIFAPTVKPLLVELGPVGTAMK 502
D+I FYN ++ VK ++ G
Sbjct: 878 ANPDMEMTEAGSSLGRSAAENSSESETEERGDLIKFYNTVYVGRVKSFALKYG------I 931
Query: 503 TNRDSEVNHNNDASVFPALPD--MSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACV 560
TN+D V S FP++ +SP+++S HSVYVSP + ++ + Y
Sbjct: 932 TNQD-HVMEAPPLSPFPSIRQQPLSPRRISQQHSVYVSPHKNG---TCLTPRTALLYKFN 987
Query: 561 GESTHAYSPFKDLTDINHRL--NSNRRVRGALNFD 593
G SP K L DIN+ L + +R + A+ D
Sbjct: 988 G------SPSKSLKDINNMLKQDEHRSKKRAITID 1016
>gi|327271628|ref|XP_003220589.1| PREDICTED: retinoblastoma-like protein 1-like [Anolis carolinensis]
Length = 1026
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 93/166 (56%), Gaps = 9/166 (5%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMC 103
V P+ M+ K + I C ++ + D G+++ +A R A L YK+LET+
Sbjct: 418 VRNPIENIMSRVKEIGEIFCQNYTRSTDDQPGSHI---DFAVNRLKLAEILYYKILETIM 474
Query: 104 TAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSK 158
E + LH K++++L FH +LAC E+VL + + F ++E + + F K
Sbjct: 475 VQEMRRLHGKDMSALLEQDIFHCSLLACCLEIVLFAYSS-PRTFPWIIEVLNLRPFYFYK 533
Query: 159 VIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
VI+ IR EE L R+ +HLNS+EE++LES+ W K S+++++L +
Sbjct: 534 VIEVLIRSEEGLSRDTVKHLNSIEEQILESLAWTKDSALWDALQAS 579
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 95/183 (51%), Gaps = 13/183 (7%)
Query: 362 PGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSL 421
P G P + + F K+ LA+VR+ + +L +S ++R ++ C + +L T L
Sbjct: 773 PLSGNRPKKTGSLALFFRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFSLVHCTDL 831
Query: 422 FFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---DHVDIITF 478
+ H+DQ++LC FY +A++S+ TF++I+ +Y QPQ V + D+I F
Sbjct: 832 MKDRHLDQLLLCAFYIMARVSKEERTFQDIMKSYRNQPQANSHVNSRDLEKEERGDLIKF 891
Query: 479 YNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPD--MSPKKVSATHSVY 536
YN I+ VK ++ +N D V S FP++ +SP+++S HSVY
Sbjct: 892 YNTIYLEKVKNFALKYDA------SNHD-HVVEAPPLSPFPSIKQQPVSPRRISQQHSVY 944
Query: 537 VSP 539
VSP
Sbjct: 945 VSP 947
>gi|242075386|ref|XP_002447629.1| hypothetical protein SORBIDRAFT_06g010020 [Sorghum bicolor]
gi|241938812|gb|EES11957.1| hypothetical protein SORBIDRAFT_06g010020 [Sorghum bicolor]
Length = 288
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 82/165 (49%), Gaps = 49/165 (29%)
Query: 4 SLFGGAVNITGAKRKFDSLASPVKTI-------TSPLSPHHSSTSKMV-VTPVSTAMTTA 55
+L G + N+ +KR F+ LASP KTI +SPLSP S + K+V +TPV++AMTTA
Sbjct: 112 NLSGDSTNLGHSKRVFEILASPTKTIKNMPTIPSSPLSPATSGSVKIVQMTPVTSAMTTA 171
Query: 56 KWLRTIICPLPSKPSADLQ----------------------------------GANLMDN 81
KWL +I LP KPS+ LQ G +L N
Sbjct: 172 KWLHEVISSLPEKPSSKLQQFLSSCDRDLTNAVTERVSIVLEAIFPTKSSADGGGSLSHN 231
Query: 82 I-------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSLF 119
WAE R++EA KL Y+VLE +C AE Q + NLT L
Sbjct: 232 CANVFGIPWAEARKMEASKLYYRVLEAICRAELQNSNVNNLTPLL 276
>gi|351702519|gb|EHB05438.1| Retinoblastoma-like protein 1 [Heterocephalus glaber]
Length = 1066
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 98/197 (49%), Gaps = 40/197 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------- 82
V+TPV++A + L+TI+ L + PS L N M+NI
Sbjct: 383 VITPVASATQSVSRLQTIVAGLKNAPSKQLTNIFESCMRNPMENIMKIVKGIGETFCQRY 442
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R A L YK+LET+ EA+ LH +++ L FHR ++
Sbjct: 443 TQSTDEQPGSHIDFAINRLKLAEILYYKILETVMAQEARRLHGMDMSVLLEQDIFHRSLM 502
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F ++E + + F KVI+ IR EE L R++ +HLNS+EE+
Sbjct: 503 ACCLEIVLFAYSS-PRTFPWIIEILNLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQ 561
Query: 185 LLESMVWEKGSSMYNSL 201
+LES+ W S+++ +L
Sbjct: 562 ILESLAWSHNSALWEAL 578
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 115/262 (43%), Gaps = 67/262 (25%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G +P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 776 GINKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 834
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------- 470
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 835 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREIVTYNN 894
Query: 471 -----------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAM 501
+ D+I FYN I+ VK A+
Sbjct: 895 DISDDFEMTDGDLEEATKTTDCSSGPVKEERGDLIKFYNTIYVGRVKSF---------AL 945
Query: 502 KTNRDSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSY 556
K + ++ +H DA S FP + SP+++S HS+YVSP + + ++ S
Sbjct: 946 KYDLSNQ-DHVVDAPPLSPFPHIKQQPGSPRRISQQHSIYVSPHKNG---SGLTPRSALL 1001
Query: 557 YACVGESTHAYSPFKDLTDINH 578
Y G SP K L DIN+
Sbjct: 1002 YKFNG------SPSKSLKDINN 1017
>gi|302845871|ref|XP_002954473.1| retinoblastoma-like protein [Volvox carteri f. nagariensis]
gi|300260145|gb|EFJ44366.1| retinoblastoma-like protein [Volvox carteri f. nagariensis]
Length = 1132
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 109/201 (54%), Gaps = 19/201 (9%)
Query: 61 IICPLPSKPSADLQGA-NLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL- 118
+ C +P + L G+ L+ +RR+E K+ Y LE + AE + +TSL
Sbjct: 512 VSCIMPEEKIPSLLGSFPLLQPSLVSERRIEVTKVYYLSLERILQAEEKNNGVAGVTSLL 571
Query: 119 ----FHRCMLACSAELVLATHKTVTMLFLAV------LERIGITAFNLSKVIQSFIRHEE 168
FHR ++ACSAE+V A ++ V+ F V L+ + I AF+L+K+IQ F+R
Sbjct: 572 SAGKFHRALVACSAEVVTACYRMVSCTFPKVCSWPQVLDALHIKAFDLAKMIQCFVRSIT 631
Query: 169 SLPR---ELRRHLNSLEERLLESMVWEKGSSMYNSL--TVARPALSAEINLGFTDILF-Q 222
+LPR +L+RHL +EE++LES+ WE S +Y+ + TVA+ L E D F
Sbjct: 632 TLPRSVRDLKRHLFLVEEKILESLAWEADSPLYSLICSTVAQDELLEECATFEDDTSFLP 691
Query: 223 DSQD-SWEEFTSILTVPPTDS 242
D+ D + + S++ +P T +
Sbjct: 692 DTADKTMQAPKSLVLIPDTSA 712
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 93/211 (44%), Gaps = 32/211 (15%)
Query: 353 PPLYPTRSNPGGGGEPCAETGINICFCKINK----LAAVRINAMVERLQLSQQIRESVYC 408
PP + + CA + C CK+ K LAA R+ + + S R V
Sbjct: 751 PPCIGAKFVESAHTDGCAAALNHFC-CKVRKQVLKLAAFRLAVLCDNFDFSPLQRLDVNT 809
Query: 409 -----LCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQL-NLTFKEIIYNYGKQPQCK 462
+ L +T LF+N HIDQIIL YG K+ +L ++F+EII +Y KQPQ +
Sbjct: 810 KVWVYQTIEHALFFQTHLFYNRHIDQIILSALYGFCKVHRLAQVSFREIIAHYRKQPQAQ 869
Query: 463 PQVFRSVF--------------DHVDIITFYNKIFAPTVKPLLVELGP------VGTAMK 502
P +FRSV DII FYN++F P +K L+ G +G +
Sbjct: 870 PSIFRSVVVEQSNPSLQVGQVGRRADIIAFYNQVFVPCMKSFLLRSGKGEYPGTIGPTIG 929
Query: 503 TNRDSEVNHNNDASVFPALPDMSPKKVSATH 533
+ + D S+ P M ++SA H
Sbjct: 930 SPDNVTGELKGDISISCGAPAME-GELSAAH 959
>gi|332208986|ref|XP_003253591.1| PREDICTED: retinoblastoma-like protein 1 [Nomascus leucogenys]
Length = 1068
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 40/200 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------- 82
V+TPV++A + L++I+ L + PS L N M+NI
Sbjct: 383 VITPVASATQSVSRLQSIVAGLKNAPSDQLTNIFESCVRNPMENIMKILKGIGETFCQHY 442
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R A L YK+LET+ E + LH +++ L FHR ++
Sbjct: 443 TQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLEQDIFHRSLM 502
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F V+E + + F KVI+ IR EE L R++ +HLNS+EE+
Sbjct: 503 ACCLEIVLFAYSS-PRTFPWVIEVLNLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQ 561
Query: 185 LLESMVWEKGSSMYNSLTVA 204
+LES+ W S+++ +L V+
Sbjct: 562 ILESLAWSHDSALWEALQVS 581
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 115/269 (42%), Gaps = 67/269 (24%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 778 GINRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 836
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------- 470
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 837 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVAYNK 896
Query: 471 -----------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAM 501
+ D+I FYN I+ VK A+
Sbjct: 897 NINDDFEMIDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSF---------AL 947
Query: 502 KTNRDSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSY 556
K + ++ +H D S FP + SP+++S HS+Y+SP + + ++ S
Sbjct: 948 KYDLSNQ-DHMMDVPPLSPFPHIKQQPGSPRRISQQHSIYISPHKNG---SGLTPRSALL 1003
Query: 557 YACVGESTHAYSPFKDLTDINHRLNSNRR 585
Y G SP K L DIN+ + +
Sbjct: 1004 YKFNG------SPSKSLKDINNMIRQGEQ 1026
>gi|159477060|ref|XP_001696629.1| retinoblastoma protein [Chlamydomonas reinhardtii]
gi|158282854|gb|EDP08606.1| retinoblastoma protein [Chlamydomonas reinhardtii]
Length = 1209
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 88/159 (55%), Gaps = 6/159 (3%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTA 105
TPV M + L + P + PS L L++ +RR+EA KL L+T+
Sbjct: 467 TPVQQLMKRVRDLVASVIPDEAAPSL-LGPFPLLNTSLGAERRIEATKLYCHSLDTILQN 525
Query: 106 EAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVI 160
E + +L F R ++AC E+V A ++ V+ F VL+ + I AF+++ +I
Sbjct: 526 EQRTNGLPAALALLGSAKFQRGLIACCIEVVAACYRMVSCAFPNVLDALRIKAFDMANII 585
Query: 161 QSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 199
+F++ +LPREL+RHL +EE++LE + WE GSS+Y+
Sbjct: 586 GTFVKSIATLPRELKRHLFLIEEKILECLAWEPGSSLYH 624
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 71/130 (54%), Gaps = 17/130 (13%)
Query: 380 KINKLAAVRINAMVERLQLSQ----QIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCF 435
K+ KL + R+ + E S ++ VY + L ++T LF+N HIDQI+L
Sbjct: 821 KVLKLTSFRLALLCENFDFSPLEGPEVNSKVYEAI-EHALYKQTHLFYNRHIDQIMLSTL 879
Query: 436 YGVAKISQLN-LTFKEIIYNYGKQPQCKPQVFRS-VFDHV----------DIITFYNKIF 483
YG K+ +L+ ++F+EII Y KQPQ + +FRS V D V DII FYN +F
Sbjct: 880 YGYCKVHKLSQVSFREIIAQYRKQPQAQQSIFRSVVIDQVLPTLQIQSRADIIGFYNAVF 939
Query: 484 APTVKPLLVE 493
P ++ L++
Sbjct: 940 VPAMRNFLLK 949
>gi|432101428|gb|ELK29610.1| Retinoblastoma-like protein 1 [Myotis davidii]
Length = 1931
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 122/267 (45%), Gaps = 54/267 (20%)
Query: 361 NPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTS 420
+P G P + + + K+ LA+VR+ + +L +S ++R ++ C + TL
Sbjct: 1653 HPTGISRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPD 1711
Query: 421 LFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---------- 470
L + H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 1712 LMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREIVA 1771
Query: 471 -----------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNN 513
+ D+I FYN I+ VK A+K + ++ +H
Sbjct: 1772 YNKKVNGDFEMTDCVREERGDLIKFYNTIYVGRVKSF---------ALKYDLSNQ-DHMM 1821
Query: 514 DA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYS 568
+A S FP + SP+++S HSVYVSP + + ++ + Y G S
Sbjct: 1822 EAPPLSPFPHIKQQPSSPRRISQQHSVYVSPHKNG---SGLTPRTALLYKFNG------S 1872
Query: 569 PFKDLTDINH--RLNSNRRVRGALNFD 593
P K L DIN+ R R + A+ D
Sbjct: 1873 PSKSLKDINNMIRQGEQRTKKRAIAID 1899
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 44/221 (19%)
Query: 27 KTITSPLSP----HHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------A 76
KT +P +P + + ++TPV++A + L++I+ L + PS L
Sbjct: 1240 KTSFAPSTPLTGRRYLREKEAIITPVASATQSVSRLQSIVTGLKTAPSEQLINIFESCMR 1299
Query: 77 NLMDNI----------------------------WAEQRRLEALKLNYKVLETMCTAEAQ 108
N M+NI +A R A L YK+LET+ E +
Sbjct: 1300 NPMENIMKIVKEIGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETR 1359
Query: 109 VLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSF 163
LH +++ L FHR ++AC E+VL + + F ++E + + F KVI+
Sbjct: 1360 RLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLRPFYFYKVIEVV 1418
Query: 164 IRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
IR EE L R++ +HLNS+EE++LES+ W S+++ +L +
Sbjct: 1419 IRSEEGLSRDMVKHLNSIEEQILESLAWNHDSALWEALQAS 1459
>gi|14573437|gb|AAK68064.1|AF375824_1 mating type protein Mat3p [Chlamydomonas reinhardtii]
Length = 1209
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 88/159 (55%), Gaps = 6/159 (3%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTA 105
TPV M + L + P + PS L L++ +RR+EA KL L+T+
Sbjct: 467 TPVQQLMKRVRDLVASVIPDEAAPSL-LGPFPLLNTSLGVERRIEATKLYCHSLDTILQN 525
Query: 106 EAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVI 160
E + +L F R ++AC E+V A ++ V+ F VL+ + I AF+++ +I
Sbjct: 526 EQRTNGLPAALALLGSAKFQRGLIACCIEVVAACYRMVSCAFPNVLDALRIKAFDMANII 585
Query: 161 QSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 199
+F++ +LPREL+RHL +EE++LE + WE GSS+Y+
Sbjct: 586 GTFVKSIATLPRELKRHLFLIEEKILECLAWEPGSSLYH 624
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 71/130 (54%), Gaps = 17/130 (13%)
Query: 380 KINKLAAVRINAMVERLQLSQ----QIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCF 435
K+ KL + R+ + E S ++ VY + L ++T LF+N HIDQI+L
Sbjct: 821 KVLKLTSFRLALLCENFDFSPLEGPEVNSKVYEAI-EHALYKQTHLFYNRHIDQIMLSTL 879
Query: 436 YGVAKISQLN-LTFKEIIYNYGKQPQCKPQVFRS-VFDHV----------DIITFYNKIF 483
YG K+ +L+ ++F+EII Y KQPQ + +FRS V D V DII FYN +F
Sbjct: 880 YGYCKVHKLSQVSFREIIAQYRKQPQAQQSIFRSVVIDQVLPTLQIQSRADIIGFYNAVF 939
Query: 484 APTVKPLLVE 493
P ++ L++
Sbjct: 940 VPAMRNFLLK 949
>gi|440803455|gb|ELR24357.1| Retinoblastomaassociated protein A domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 1109
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 39/231 (16%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNIWA--------------- 84
TP+ A++ WL++ + + PS L+ N + I A
Sbjct: 513 TPMRAALSAVAWLKSTLEHTQAAPSPVLRKFFAACENNPAEEIEARVAKYSGLVPFGEGE 572
Query: 85 --EQRRLEALKLNYKVLETMCTAEAQVLHAKNLTS---------LFHRCMLACSAELVLA 133
+QRR +KL YK+LE M AE + L +++S FHR +LAC E++
Sbjct: 573 EGQQRRELGIKLYYKILEAMLLAEEERLKRASVSSDFSTLLRHDSFHRSLLACCFEVIAY 632
Query: 134 THKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEK 193
+K + + F +L I AF+ K+I+S IR+E +LP + RHL +EE +LES+ W++
Sbjct: 633 CYKIIDLAFPKLLSLFHIHAFDFFKLIESVIRYERTLPVGVTRHLGHIEETILESVGWQE 692
Query: 194 GSSMYNSLTVARPALSAEINLGFTDILFQDSQDSWEEF-TSILTVPPTDSP 243
GS ++ L A PA ++ + + +Q +EF S PP+ +P
Sbjct: 693 GSPVFALL--ADPAKVRDL----LALFRRPTQGGAKEFMASSALSPPSPAP 737
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 10/150 (6%)
Query: 354 PLYPTR-SNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPK 412
P PT + PG GG + + + + K+ A+ R ++ + L ++ + V+
Sbjct: 743 PARPTAPATPGRGGMGGSWHSLCLFYRKVLGQASRRCWSLCAAIGLRPEVFDQVW-RATI 801
Query: 413 RTLNQRTSLFFNCHIDQIILCCFYGVAKISQL-NLTFKEIIYNYGKQPQCKP--QVFRSV 469
L + H+DQIILC YGV++++++ ++ F+ I+ +Y KQP KP +V+R+V
Sbjct: 802 ELLISHANFIKGRHLDQIILCVIYGVSRVNKVKDVAFRGILEHYRKQPHRKPAAEVYRAV 861
Query: 470 -----FDHVDIITFYNKIFAPTVKPLLVEL 494
+ DII FYN +F P ++ L++
Sbjct: 862 PLNEPGEKGDIIKFYNFVFIPQLESFLLQF 891
>gi|347378|gb|AAA36397.1| p107, partial [Homo sapiens]
Length = 935
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 26/221 (11%)
Query: 6 FGGAVNITGAK--RKFDSLASPVKTITSPLSPHHSSTSKM---------------VVTPV 48
F + +TG + R+ +++ +PV + T +S S + + V PV
Sbjct: 232 FAPSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSDQLINIFESCVRNPV 291
Query: 49 STAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQ 108
M K + C ++ S D Q + +D +A R A L YK+LET+ E +
Sbjct: 292 ENIMKILKGIGETFCQHYTQ-STDEQPGSHID--FAVNRLKLAEILYYKILETVMVQETR 348
Query: 109 VLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSF 163
LH +++ L FHR ++AC E+VL + + F ++E + + F KVI+
Sbjct: 349 RLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVV 407
Query: 164 IRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
IR EE L R++ +HLNS+EE++LES+ W S+++ +L V+
Sbjct: 408 IRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQVS 448
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 67/269 (24%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 645 GINRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 703
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------- 470
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 704 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVAYNK 763
Query: 471 -----------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAM 501
+ D+I FYN I+ VK A+
Sbjct: 764 NINDDFEMIDCDLEDATKTPDCSSGPVKEERSDLIKFYNTIYVGRVKSF---------AL 814
Query: 502 KTNRDSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSY 556
K + ++ +H DA S FP + SP+++S HS+Y+SP + + ++ S
Sbjct: 815 KYDLANQ-DHMMDAPPLSPFPHIKQQPGSPRRISQQHSIYISPHKNG---SGLTPRSALL 870
Query: 557 YACVGESTHAYSPFKDLTDINHRLNSNRR 585
Y G SP K L DIN+ + +
Sbjct: 871 YKFNG------SPSKSLKDINNMIRQGEQ 893
>gi|114681879|ref|XP_001139919.1| PREDICTED: retinoblastoma-like protein 1 isoform 5 [Pan
troglodytes]
gi|410207844|gb|JAA01141.1| retinoblastoma-like 1 (p107) [Pan troglodytes]
gi|410249806|gb|JAA12870.1| retinoblastoma-like 1 (p107) [Pan troglodytes]
gi|410249808|gb|JAA12871.1| retinoblastoma-like 1 (p107) [Pan troglodytes]
gi|410249810|gb|JAA12872.1| retinoblastoma-like 1 (p107) [Pan troglodytes]
gi|410293784|gb|JAA25492.1| retinoblastoma-like 1 (p107) [Pan troglodytes]
gi|410293786|gb|JAA25493.1| retinoblastoma-like 1 (p107) [Pan troglodytes]
gi|410331983|gb|JAA34938.1| retinoblastoma-like 1 (p107) [Pan troglodytes]
Length = 1068
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 40/200 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------- 82
V+TPV++A + L++I+ L + PS L N M+NI
Sbjct: 383 VITPVASATQSVSRLQSIVAGLKNAPSDQLINIFESCVRNPMENIMKILKGIGETFCQHY 442
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R A L YK+LET+ E + LH +++ L FHR ++
Sbjct: 443 TQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLEQDIFHRSLM 502
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F ++E + + F KVI+ IR EE L R++ +HLNS+EE+
Sbjct: 503 ACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQ 561
Query: 185 LLESMVWEKGSSMYNSLTVA 204
+LES+ W S+++ +L V+
Sbjct: 562 ILESLAWSHDSALWEALQVS 581
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 67/269 (24%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 778 GINRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 836
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------- 470
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 837 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVAYNK 896
Query: 471 -----------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAM 501
+ D+I FYN I+ VK A+
Sbjct: 897 NINDDFEMIDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSF---------AL 947
Query: 502 KTNRDSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSY 556
K + ++ +H DA S FP + SP+++S HS+Y+SP + + ++ S
Sbjct: 948 KYDLSNQ-DHMMDAPPLSPFPHIKQQPGSPRRISQQHSIYISPHKNG---SGLTPRSALL 1003
Query: 557 YACVGESTHAYSPFKDLTDINHRLNSNRR 585
Y G SP K L DIN+ + +
Sbjct: 1004 YKFNG------SPSKSLKDINNMIRQGEQ 1026
>gi|300797136|ref|NP_001177995.1| retinoblastoma-like protein 1 [Rattus norvegicus]
Length = 1049
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 97/200 (48%), Gaps = 40/200 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------- 82
V TPV++A + L++I+ L S PS L N M NI
Sbjct: 383 VTTPVASATQSVSRLQSIVAGLKSAPSEQLLTIFESCMRNPMGNIVKIVKGIGETFCQHY 442
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R A L YK+LET+ E + LH +++ L FHR +L
Sbjct: 443 TQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLEQDIFHRSLL 502
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F +++ +G+ F KVI+ IR EE L R++ +HLNS+EE+
Sbjct: 503 ACCLEIVLFAYSS-PRTFPWIIDVLGLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQ 561
Query: 185 LLESMVWEKGSSMYNSLTVA 204
+LES+ W S+++ +L +
Sbjct: 562 ILESLAWTNNSALWEALRAS 581
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 129/301 (42%), Gaps = 69/301 (22%)
Query: 330 NNFTSLVKDCLLGLNNLKSKPLPPPLYPTRSNPGGGGEPCAETG-INICFCKINKLAAVR 388
+ SL L+G + P L T+ P G TG + + + K+ LA+VR
Sbjct: 747 ESLVSLTAQSLIG-----ASPKQTHLTKTQDAPLTGISKPKRTGSLALFYRKVYHLASVR 801
Query: 389 INAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTF 448
+ + +L +S ++R ++ C + TL L + H+DQ++LC FY +AK+++ TF
Sbjct: 802 LRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTF 860
Query: 449 KEIIYNYGKQPQCKPQVFRSVF-------------------------------------- 470
+EI+ +Y QPQ V+RSV
Sbjct: 861 QEIMKSYRNQPQANSHVYRSVLLKSIPGEVVAYNGDYEMTDGDIEDATKTPNCSSEPVKE 920
Query: 471 DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA---SVFPALPDM--S 525
+ D+I FYN I+ VK A+K + ++ +H DA S FP + S
Sbjct: 921 ERGDLIKFYNAIYVGRVKSF---------ALKYDLSNQ-DHIMDAPPLSPFPHIKQQPGS 970
Query: 526 PKKVSATHSVYVSPLRTSE----MDALI-----SHSSKSYYACVGESTHAYSPFKDLTDI 576
P+++S HS+YVSP + + AL+ S S K+ + S A SP K L
Sbjct: 971 PRRISQQHSIYVSPHKNASGLTPRSALLYKFNGSPSKKAKKRVIAISGDAESPAKRLCQE 1030
Query: 577 N 577
N
Sbjct: 1031 N 1031
>gi|292374|gb|AAA02489.1| p107 [Homo sapiens]
gi|449005|prf||1918267A p107 protein
Length = 1068
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 26/221 (11%)
Query: 6 FGGAVNITGAK--RKFDSLASPVKTITSPLSPHHSSTSKM---------------VVTPV 48
F + +TG + R+ +++ +PV + T +S S + + V PV
Sbjct: 365 FAPSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSDQLINIFESCVRNPV 424
Query: 49 STAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQ 108
M K + C ++ S D Q + +D +A R A L YK+LET+ E +
Sbjct: 425 ENIMKILKGIGETFCQHYTQ-STDEQPGSHID--FAVNRLKLAEILYYKILETVMVQETR 481
Query: 109 VLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSF 163
LH +++ L FHR ++AC E+VL + + F ++E + + F KVI+
Sbjct: 482 RLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVV 540
Query: 164 IRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
IR EE L R++ +HLNS+EE++LES+ W S+++ +L V+
Sbjct: 541 IRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQVS 581
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 67/269 (24%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 778 GINRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 836
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------- 470
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 837 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVAYNK 896
Query: 471 -----------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAM 501
+ D+I FYN I+ VK A+
Sbjct: 897 NINDDFEMIDCDLEDATKTPDCSSGPVKEERSDLIKFYNTIYVGRVKSF---------AL 947
Query: 502 KTNRDSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSY 556
K + ++ +H DA S FP + SP+++S HS+Y+SP + + ++ S
Sbjct: 948 KYDLANQ-DHMMDAPPLSPFPHIKQQPGSPRRISQQHSIYISPHKNG---SGLTPRSALL 1003
Query: 557 YACVGESTHAYSPFKDLTDINHRLNSNRR 585
Y G SP K L DIN+ + +
Sbjct: 1004 YKFNG------SPSKSLKDINNMIRQGEQ 1026
>gi|297707032|ref|XP_002830322.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 1
[Pongo abelii]
Length = 1069
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 40/200 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------- 82
V+TPV++A + L++I+ L + PS L N M+NI
Sbjct: 384 VITPVASATQSVSRLQSIVAGLKNSPSDQLINIFESCVRNPMENIMKILKGIGETFCQHY 443
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R A L YK+LET+ E + LH +++ L FHR ++
Sbjct: 444 TQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVXETRRLHGMDMSVLLEQDIFHRSLM 503
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F ++E + + F KVI+ IR EE L R++ +HLNS+EE+
Sbjct: 504 ACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQ 562
Query: 185 LLESMVWEKGSSMYNSLTVA 204
+LES+ W S+++ +L V+
Sbjct: 563 ILESLAWSHDSALWEALQVS 582
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 67/269 (24%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 779 GINRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 837
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------- 470
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 838 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVAYNK 897
Query: 471 -----------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAM 501
+ D+I FYN I+ VK A+
Sbjct: 898 NINDDFEMIDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSF---------AL 948
Query: 502 KTNRDSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSY 556
K + ++ +H DA S FP + SP+++S HS+Y+SP + + ++ S
Sbjct: 949 KYDLSNQ-DHMMDAPPLSPFPHIKQQPGSPRRISQQHSIYISPHKNG---SGLTPRSALL 1004
Query: 557 YACVGESTHAYSPFKDLTDINHRLNSNRR 585
Y G SP K L DIN+ + +
Sbjct: 1005 YKFNG------SPSKSLKDINNMIRQGEQ 1027
>gi|149043121|gb|EDL96695.1| rCG32239, isoform CRA_a [Rattus norvegicus]
Length = 984
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 97/200 (48%), Gaps = 40/200 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------- 82
V TPV++A + L++I+ L S PS L N M NI
Sbjct: 304 VTTPVASATQSVSRLQSIVAGLKSAPSEQLLTIFESCMRNPMGNIVKIVKGIGETFCQHY 363
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R A L YK+LET+ E + LH +++ L FHR +L
Sbjct: 364 TQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLEQDIFHRSLL 423
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F +++ +G+ F KVI+ IR EE L R++ +HLNS+EE+
Sbjct: 424 ACCLEIVLFAYSS-PRTFPWIIDVLGLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQ 482
Query: 185 LLESMVWEKGSSMYNSLTVA 204
+LES+ W S+++ +L +
Sbjct: 483 ILESLAWTNNSALWEALRAS 502
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 130/299 (43%), Gaps = 69/299 (23%)
Query: 331 NFTSLVKDCLLGLNNLKSKPLPPPLYPTRSNPGGGGEPCAETG-INICFCKINKLAAVRI 389
+ SL L+G + P L T+ P G TG + + + K+ LA+VR+
Sbjct: 669 SLVSLTAQSLIG-----ASPKQTHLTKTQDAPLTGISKPKRTGSLALFYRKVYHLASVRL 723
Query: 390 NAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFK 449
+ +L +S ++R ++ C + TL L + H+DQ++LC FY +AK+++ TF+
Sbjct: 724 RDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQ 782
Query: 450 EIIYNYGKQPQCKPQVFRSVF--------------------------------------D 471
EI+ +Y QPQ V+RSV +
Sbjct: 783 EIMKSYRNQPQANSHVYRSVLLKSIPGEVVAYNGDYEMTDGDIEDATKTPNCSSEPVKEE 842
Query: 472 HVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA---SVFPALPDM--SP 526
D+I FYN I+ VK A+K + ++ +H DA S FP + SP
Sbjct: 843 RGDLIKFYNAIYVGRVKSF---------ALKYDLSNQ-DHIMDAPPLSPFPHIKQQPGSP 892
Query: 527 KKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNRR 585
+++S HS+YVSP + + + ++ S Y G SP K L DIN+ + +
Sbjct: 893 RRISQQHSIYVSPHKNA---SGLTPRSALLYKFNG------SPSKSLKDINNMIRQGEQ 942
>gi|34577079|ref|NP_002886.2| retinoblastoma-like protein 1 isoform a [Homo sapiens]
gi|90103515|sp|P28749.3|RBL1_HUMAN RecName: Full=Retinoblastoma-like protein 1; AltName: Full=107 kDa
retinoblastoma-associated protein; Short=p107; AltName:
Full=pRb1
gi|119596494|gb|EAW76088.1| retinoblastoma-like 1 (p107), isoform CRA_a [Homo sapiens]
gi|158261783|dbj|BAF83069.1| unnamed protein product [Homo sapiens]
gi|168277456|dbj|BAG10706.1| retinoblastoma-like protein 1 [synthetic construct]
Length = 1068
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 26/221 (11%)
Query: 6 FGGAVNITGAK--RKFDSLASPVKTITSPLSPHHSSTSKM---------------VVTPV 48
F + +TG + R+ +++ +PV + T +S S + + V PV
Sbjct: 365 FAPSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSDQLINIFESCVRNPV 424
Query: 49 STAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQ 108
M K + C ++ S D Q + +D +A R A L YK+LET+ E +
Sbjct: 425 ENIMKILKGIGETFCQHYTQ-STDEQPGSHID--FAVNRLKLAEILYYKILETVMVQETR 481
Query: 109 VLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSF 163
LH +++ L FHR ++AC E+VL + + F ++E + + F KVI+
Sbjct: 482 RLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVV 540
Query: 164 IRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
IR EE L R++ +HLNS+EE++LES+ W S+++ +L V+
Sbjct: 541 IRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQVS 581
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 67/269 (24%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 778 GINRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 836
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------- 470
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 837 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVAYNK 896
Query: 471 -----------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAM 501
+ D+I FYN I+ VK A+
Sbjct: 897 NINDDFEMIDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSF---------AL 947
Query: 502 KTNRDSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSY 556
K + ++ +H DA S FP + SP+++S HS+Y+SP + + ++ S
Sbjct: 948 KYDLANQ-DHMMDAPPLSPFPHIKQQPGSPRRISQQHSIYISPHKNG---SGLTPRSALL 1003
Query: 557 YACVGESTHAYSPFKDLTDINHRLNSNRR 585
Y G SP K L DIN+ + +
Sbjct: 1004 YKFNG------SPSKSLKDINNMIRQGEQ 1026
>gi|34577077|ref|NP_899662.1| retinoblastoma-like protein 1 isoform b [Homo sapiens]
gi|21595246|gb|AAH32247.1| Retinoblastoma-like 1 (p107) [Homo sapiens]
gi|119596495|gb|EAW76089.1| retinoblastoma-like 1 (p107), isoform CRA_b [Homo sapiens]
gi|123994215|gb|ABM84709.1| retinoblastoma-like 1 (p107) [synthetic construct]
gi|124126913|gb|ABM92229.1| retinoblastoma-like 1 (p107) [synthetic construct]
Length = 1014
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 26/221 (11%)
Query: 6 FGGAVNITGAK--RKFDSLASPVKTITSPLSPHHSSTSKM---------------VVTPV 48
F + +TG + R+ +++ +PV + T +S S + + V PV
Sbjct: 365 FAPSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSDQLINIFESCVRNPV 424
Query: 49 STAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQ 108
M K + C ++ S D Q + +D +A R A L YK+LET+ E +
Sbjct: 425 ENIMKILKGIGETFCQHYTQ-STDEQPGSHID--FAVNRLKLAEILYYKILETVMVQETR 481
Query: 109 VLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSF 163
LH +++ L FHR ++AC E+VL + + F ++E + + F KVI+
Sbjct: 482 RLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVV 540
Query: 164 IRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
IR EE L R++ +HLNS+EE++LES+ W S+++ +L V+
Sbjct: 541 IRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQVS 581
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 58/223 (26%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 778 GINRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 836
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------- 470
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 837 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVAYNK 896
Query: 471 -----------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAM 501
+ D+I FYN I+ VK A+
Sbjct: 897 NINDDFEMIDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSF---------AL 947
Query: 502 KTNRDSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSP 539
K + ++ +H DA S FP + SP+++S HS+Y+SP
Sbjct: 948 KYDLANQ-DHMMDAPPLSPFPHIKQQPGSPRRISQQHSIYISP 989
>gi|410953874|ref|XP_003983593.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 1
[Felis catus]
Length = 1068
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 106/221 (47%), Gaps = 44/221 (19%)
Query: 27 KTITSPLSP----HHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------A 76
KT +P +P + + V+TPV++A + L++I+ L + PS L
Sbjct: 362 KTSFAPSTPLTGRRYLQEKEAVITPVASATQSVSRLQSIVAGLKNAPSEQLMNIFESCIR 421
Query: 77 NLMDNI----------------------------WAEQRRLEALKLNYKVLETMCTAEAQ 108
N M+NI +A R A L YK+LET+ E +
Sbjct: 422 NPMENIMKIVKGIGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETR 481
Query: 109 VLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSF 163
LH +++ L FHR ++AC E+VL + + F ++E + + F KVI+
Sbjct: 482 RLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVV 540
Query: 164 IRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
IR EE L R++ +HLNS+EE++LES+ W S+++ +L +
Sbjct: 541 IRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQAS 581
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 118/277 (42%), Gaps = 63/277 (22%)
Query: 363 GGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLF 422
G +P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 777 AGISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLM 835
Query: 423 FNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------ 470
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 836 KDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPKEVVAYN 895
Query: 471 ------------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTA 500
+ D+I FYN I+ VK +
Sbjct: 896 XNINGDFEMTDYELEDATKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSFALRYD----- 950
Query: 501 MKTNRDSEVNHNNDASVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYA 558
+N+D V S FP + SP+++S HS+YVSP + + + ++ S Y
Sbjct: 951 -LSNQD-HVMEAPPLSPFPHIKQQPGSPRRISQQHSIYVSPHKNA---SGLTPRSALLYK 1005
Query: 559 CVGESTHAYSPFKDLTDINH--RLNSNRRVRGALNFD 593
G SP K L DIN+ R R + A+ D
Sbjct: 1006 FNG------SPSKSLKDINNMIRQGEQRTKKRAIAID 1036
>gi|149043122|gb|EDL96696.1| rCG32239, isoform CRA_b [Rattus norvegicus]
Length = 835
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 96/197 (48%), Gaps = 40/197 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQGA------NLMDNI--------------- 82
V TPV++A + L++I+ L S PS L N M NI
Sbjct: 304 VTTPVASATQSVSRLQSIVAGLKSAPSEQLLTIFESCMRNPMGNIVKIVKGIGETFCQHY 363
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R A L YK+LET+ E + LH +++ L FHR +L
Sbjct: 364 TQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLEQDIFHRSLL 423
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F +++ +G+ F KVI+ IR EE L R++ +HLNS+EE+
Sbjct: 424 ACCLEIVLFAYSS-PRTFPWIIDVLGLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQ 482
Query: 185 LLESMVWEKGSSMYNSL 201
+LES+ W S+++ +L
Sbjct: 483 ILESLAWTNNSALWEAL 499
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 7/142 (4%)
Query: 330 NNFTSLVKDCLLGLNNLKSKPLPPPLYPTRSNPGGGGEPCAETG-INICFCKINKLAAVR 388
+ SL L+G + P L T+ P G TG + + + K+ LA+VR
Sbjct: 668 ESLVSLTAQSLIG-----ASPKQTHLTKTQDAPLTGISKPKRTGSLALFYRKVYHLASVR 722
Query: 389 INAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTF 448
+ + +L +S ++R ++ C + TL L + H+DQ++LC FY +AK+++ TF
Sbjct: 723 LRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTF 781
Query: 449 KEIIYNYGKQPQCKPQVFRSVF 470
+EI+ +Y QPQ V+RSV
Sbjct: 782 QEIMKSYRNQPQANSHVYRSVL 803
>gi|224043382|ref|XP_002198362.1| PREDICTED: retinoblastoma-associated protein [Taeniopygia guttata]
Length = 919
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 79/142 (55%), Gaps = 19/142 (13%)
Query: 83 WAE---QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLAT 134
WAE QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT
Sbjct: 425 WAETGSQRYKLGVRLYYRVMESMLKSEEERLSVQNFSKLLNDNIFHTSLLACALEVVMAT 484
Query: 135 H-----------KTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEE 183
+ + F +L + AF+ KVI+SFIR E SL RE+ +HL E
Sbjct: 485 YGRNASQSDNTSAETDLSFPWILNVFDLKAFDFYKVIESFIRAEPSLTREMIKHLEHCEH 544
Query: 184 RLLESMVWEKGSSMYNSLTVAR 205
R++ES+ W+ GS +++ + ++
Sbjct: 545 RIMESLAWQSGSPLFDRIKESK 566
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 372 TGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQII 431
T +++ + K+ LA R++ + L E + + TL L + H+DQI+
Sbjct: 634 TSLSLFYKKVYLLAYRRLHTLFLHLLSEHPELEPLIWTLFQHTLQNEYELMRDRHLDQIM 693
Query: 432 LCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKIFAPTV 487
+C YG+ K+ ++L FK I+ Y + + F+ V + II FYN +F +
Sbjct: 694 MCSMYGICKVKNVDLQFKMIVSAYKELCNTNQETFKRVLIREEKYDSIIVFYNLVFMQKL 753
Query: 488 KPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRTSEM-- 545
K +++ ++R ++ P SP++V A +++Y+SPL++
Sbjct: 754 KTNILQYA-------SSRPPTLSPIPHIPRSPYQFSNSPRRVPAGNNIYISPLKSPYKFS 806
Query: 546 DALISHSSKS----YYACVGESTHAYSPFKDLTDI 576
D S + + +GES Y F+ + +
Sbjct: 807 DGFQSPTKMTPRSRILVSIGESFGTYEKFQKINQM 841
>gi|397524105|ref|XP_003832050.1| PREDICTED: retinoblastoma-like protein 1 [Pan paniscus]
Length = 1031
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 40/200 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------- 82
V+TPV++A + L++I+ L + PS L N M+NI
Sbjct: 383 VITPVASATQSVSRLQSIVAGLKNAPSDQLINIFESCVRNPMENIMKILKGIGETFCQHY 442
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R A L YK+LET+ E + LH +++ L FHR ++
Sbjct: 443 TQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLEQDIFHRSLM 502
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F ++E + + F KVI+ IR EE L R++ +HLNS+EE+
Sbjct: 503 ACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQ 561
Query: 185 LLESMVWEKGSSMYNSLTVA 204
+LES+ W S+++ +L V+
Sbjct: 562 ILESLAWSHDSALWEALQVS 581
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 20/227 (8%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 778 GINRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 836
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVFDHV--DIITFYNK 481
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV + YNK
Sbjct: 837 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVAYNK 896
Query: 482 IFAPTVKPL-LVELGPVGTAMKTNRDSEVNHNNDASVFPALPDM--SPKKVSATHSVYVS 538
+ + + V ++ D+ S FP + SP+++S HS+Y+S
Sbjct: 897 NINDDFEMIDCADCSRVAVLIRILMDAP-----PLSPFPHIKQQPGSPRRISQQHSIYIS 951
Query: 539 PLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNRR 585
P + + ++ S Y G SP K L DIN+ + +
Sbjct: 952 PHKNG---SGLTPRSALLYKFNG------SPSKSLKDINNMIRQGEQ 989
>gi|1666661|emb|CAA70428.1| retinoblastoma protein [Notophthalmus viridescens]
Length = 899
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 76/129 (58%), Gaps = 9/129 (6%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E M +E + L +N ++L FH +LACS E+V+AT+ +++
Sbjct: 424 QRFKVGVRLAYRVMEAMLKSEEKRLSVQNFSNLLNNSAFHESLLACSIEVVMATYGSISR 483
Query: 140 ---MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSS 196
+ F +LE I ++ KVI+SFI+ E SL RE+ +HL S E R++ES+ W S
Sbjct: 484 ETDLSFPWILEVFKIEPYDFYKVIESFIKDEPSLTREMIKHLESCEHRIMESLAWRSESP 543
Query: 197 MYNSLTVAR 205
+Y + R
Sbjct: 544 IYELIRQPR 552
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 39/254 (15%)
Query: 357 PTRSNPGGGGEPCA-------ETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCL 409
PT S P P T +++ + K+ +LA +R+N + +L E V
Sbjct: 599 PTLSVPESNNVPAPLPQPTQRSTSLSLFYKKVYRLAYLRMNTLCSKLLPDHPELEHVIWT 658
Query: 410 CPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV 469
+ TL L + H+DQI++C Y + K+ ++L FK I+ Y + P + F+ V
Sbjct: 659 LFQHTLQNEYELMKDRHLDQIMMCSMYAICKVKAIDLRFKTIVTAYKELPNTNQETFKHV 718
Query: 470 F----DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALP--- 522
H II FYN +F +K +++ + N S P +P
Sbjct: 719 LIRDGQHDSIIVFYNLVFMQKLKTNILQYATL-------------RNPTLSPIPHIPRSP 765
Query: 523 ---DMSPKKVSATHSVYVSPLRT--SEMDALISHSSKS----YYACVGESTHAYSPFKDL 573
SP ++ +++Y+SPL++ + L+S + + +GE F+
Sbjct: 766 YKISNSPLRLPGGNNIYISPLKSPYKHPEGLLSPTKMTPRSRILVSIGEQFGTAEKFQ-- 823
Query: 574 TDINHRLNSNRRVR 587
IN L+S+ R+R
Sbjct: 824 -KINQMLSSSERLR 836
>gi|355715600|gb|AES05379.1| retinoblastoma-like 1 [Mustela putorius furo]
Length = 493
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 40/197 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------- 82
V+TPV++A + L++I+ L + PS L N M+NI
Sbjct: 89 VITPVASATQSVSRLQSIVAGLKNAPSEQLTNIFESCMRNPMENIMKIVKGIGETFCQHY 148
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R A L YK+LET+ E + LH +++ L FHR ++
Sbjct: 149 TQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLEQDIFHRSLM 208
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F ++E + + F KVI+ IR EE L R++ +HLNS+EE+
Sbjct: 209 ACCLEIVLFAYSS-PRTFPWIIEVLNLRPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQ 267
Query: 185 LLESMVWEKGSSMYNSL 201
+LES+ W S+++ +L
Sbjct: 268 ILESLAWSHDSALWEAL 284
>gi|431894364|gb|ELK04164.1| Retinoblastoma-like protein 1 [Pteropus alecto]
Length = 1053
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 51/240 (21%)
Query: 14 GAKRKFDSLASPVKTITSPLSPHHSST----------SKMVVTPVSTAMTTAKWLRTIIC 63
G RKF +P+ +T+ + ST + V+TPV++A + L++I+
Sbjct: 332 GTPRKFTG-DTPLGKLTAQKTSFAPSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVA 390
Query: 64 PLPSKPSADLQG------ANLMDNI----------------------------WAEQRRL 89
L + PS L N M+NI +A R
Sbjct: 391 GLKNAPSEQLINIFESCMRNPMENIMKIVKGIGETFCQHYTQSTDEQPGSHIDFAVNRLK 450
Query: 90 EALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLA 144
A L YK+LET+ E + LH +++ L FHR ++AC E+VL + + F
Sbjct: 451 LAEILYYKILETVMVQETRRLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSS-PRTFPW 509
Query: 145 VLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
++E + + F KVI+ IR EE L R++ +HLNS+EE++LES+ W S+++ +L +
Sbjct: 510 IIEVLNLRPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQTS 569
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 122/279 (43%), Gaps = 66/279 (23%)
Query: 361 NPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTS 420
+P G P + + + K+ LA+VR+ + +L +S ++R ++ C + TL
Sbjct: 763 HPTGISRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPD 821
Query: 421 LFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---------- 470
L + H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 822 LMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLRKEIVAYSK 881
Query: 471 -----------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAM 501
+ D+I FYN ++ VK A+
Sbjct: 882 KINGDFEMTDSDLEEAIKTPDCSSGPVREERGDLIKFYNTVYVGRVKSF---------AL 932
Query: 502 KTNRDSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSY 556
K + ++ +H +A S FP + SP+++S HSVYVSP + + ++ S
Sbjct: 933 KYDLSNQ-DHMMEAPPLSPFPHIKQQPGSPRRISQQHSVYVSPHKNG---SGLTPRSALL 988
Query: 557 YACVGESTHAYSPFKDLTDINH--RLNSNRRVRGALNFD 593
Y G SP K L DIN+ R + + A+ D
Sbjct: 989 YKFNG------SPSKSLKDINNMIRQGEQKTKKRAIAID 1021
>gi|73992372|ref|XP_534412.2| PREDICTED: retinoblastoma-like protein 1 [Canis lupus familiaris]
Length = 1068
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 106/221 (47%), Gaps = 44/221 (19%)
Query: 27 KTITSPLSP----HHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------A 76
KT +P +P + + V+TPV++A + L++I+ L + PS L
Sbjct: 362 KTSFAPSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSEQLINIFESCIR 421
Query: 77 NLMDNI----------------------------WAEQRRLEALKLNYKVLETMCTAEAQ 108
N M+NI +A R A L YK+LET+ E +
Sbjct: 422 NPMENIMKIVKGIGETFCQHYTQSTDEQPGSHIDFAINRLKLAEILYYKILETVMVQETR 481
Query: 109 VLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSF 163
LH +++ L FHR ++AC E+VL + + F ++E + + F KVI+
Sbjct: 482 RLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLRPFYFYKVIEVV 540
Query: 164 IRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
IR EE L R++ +HLNS+EE++LES+ W S+++ +L +
Sbjct: 541 IRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQAS 581
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 121/280 (43%), Gaps = 63/280 (22%)
Query: 360 SNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRT 419
++P G +P + + + K+ LA+VR+ + +L +S ++R ++ C + TL
Sbjct: 774 AHPTGISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCP 832
Query: 420 SLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------- 470
L + H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 833 DLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVV 892
Query: 471 ---------------------------------DHVDIITFYNKIFAPTVKPLLVELGPV 497
+ D+I FYN I+ VK ++
Sbjct: 893 AYNKNINGDFEMTDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVARVKSFALKYD-- 950
Query: 498 GTAMKTNRDSEVNHNNDASVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKS 555
+N+D V S FP + SP+++S HS+YVSP + + ++ S
Sbjct: 951 ----LSNQD-HVMEAPPLSPFPHIKQQPGSPRRISQQHSIYVSPHKNG---SGLTPRSAL 1002
Query: 556 YYACVGESTHAYSPFKDLTDINH--RLNSNRRVRGALNFD 593
Y G SP K L DIN+ R R + A+ D
Sbjct: 1003 LYKFNG------SPSKSLKDINNMIRQGEQRTKKRAITID 1036
>gi|383420481|gb|AFH33454.1| retinoblastoma-like protein 1 isoform a [Macaca mulatta]
Length = 1067
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 40/200 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------- 82
V+TPV++A + L++I+ L + PS L N M+NI
Sbjct: 383 VITPVASATQSVSRLQSIVAGLKNAPSDQLTNIFESCVRNPMENIMKILKGMGETFCQHY 442
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R A L YK+LET+ E + LH +++ L FH ++
Sbjct: 443 TQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLEQDIFHHSLM 502
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F ++E + + F KVI+ IR EE L R++ +HLNS+EE+
Sbjct: 503 ACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQ 561
Query: 185 LLESMVWEKGSSMYNSLTVA 204
+LES+ W S+++ +L V+
Sbjct: 562 ILESLAWSHDSALWEALQVS 581
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 116/269 (43%), Gaps = 67/269 (24%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 777 GISRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 835
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------- 470
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 836 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREFVAYNK 895
Query: 471 -----------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAM 501
+ D+I FYN I+ VK A+
Sbjct: 896 NINDDFEMIDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSF---------AL 946
Query: 502 KTNRDSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSY 556
K + ++ +H DA S FP + SP+++S HS+Y+SP + + ++ S
Sbjct: 947 KYDLSNQ-DHVMDAPPLSPFPHIKQQPGSPRRISQQHSIYISPHKNG---SGLTPRSTLL 1002
Query: 557 YACVGESTHAYSPFKDLTDINHRLNSNRR 585
Y G SP K L +IN+ + +
Sbjct: 1003 YKFNG------SPSKSLKEINNMIRQGEQ 1025
>gi|355784516|gb|EHH65367.1| pRb1, partial [Macaca fascicularis]
Length = 1014
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 40/200 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------- 82
V+TPV++A + L++I+ L + PS L N M+NI
Sbjct: 330 VITPVASATQSVSRLQSIVAGLKNAPSDQLTNIFESCVRNPMENIMKILKGMGETFCQHY 389
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R A L YK+LET+ E + LH +++ L FH ++
Sbjct: 390 TQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLEQDIFHHSLM 449
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F ++E + + F KVI+ IR EE L R++ +HLNS+EE+
Sbjct: 450 ACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQ 508
Query: 185 LLESMVWEKGSSMYNSLTVA 204
+LES+ W S+++ +L V+
Sbjct: 509 ILESLAWSHDSALWEALQVS 528
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 67/269 (24%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 724 GISRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 782
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------- 470
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+R+V
Sbjct: 783 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRNVLLKSIPREFVAYNK 842
Query: 471 -----------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAM 501
+ D+I FYN I+ VK A+
Sbjct: 843 NINDDFEMIDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSF---------AL 893
Query: 502 KTNRDSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSY 556
K + ++ +H DA S FP + SP+++S HS+Y+SP + + ++ S
Sbjct: 894 KYDLSNQ-DHVMDAPPLSPFPHIKQQPGSPRRISQQHSIYISPHKNG---SGLTPRSTLL 949
Query: 557 YACVGESTHAYSPFKDLTDINHRLNSNRR 585
Y G SP K L +IN+ + +
Sbjct: 950 YKFNG------SPSKSLKEINNMIRQGEQ 972
>gi|194578849|ref|NP_001124082.1| retinoblastoma-like protein 1 [Danio rerio]
gi|190338209|gb|AAI62986.1| Rbl1 protein [Danio rerio]
Length = 1058
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 83/140 (59%), Gaps = 9/140 (6%)
Query: 67 SKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSLF-----HR 121
+ P+ DL GA+ MD +AE+R A L +K+LE + T E + L K+ L H
Sbjct: 444 TNPTDDLPGAH-MD--FAEKRLKLAEILYFKILENVMTQEMKRLQGKDWAVLLEQEVLHC 500
Query: 122 CMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSL 181
+LAC E+VL ++ + F +LE I F KVI+ FIR EE L R++ +HLNS+
Sbjct: 501 SLLACCLEVVLFSYSS-QRTFPWILEIFQIPPFYFYKVIEVFIRSEEGLSRDMVKHLNSI 559
Query: 182 EERLLESMVWEKGSSMYNSL 201
EE++LES W + S+++N+L
Sbjct: 560 EEQVLESRAWTRDSALWNAL 579
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 74/285 (25%)
Query: 348 SKP-LPPPLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESV 406
S+P L P + S P +P + + F K+ LA+VR+ + +L +S ++R +
Sbjct: 745 SRPALAAPAISSDSQPPPANKPRRTGSLALFFRKVYHLASVRLRDLCLKLDISSELRGKI 804
Query: 407 YCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVF 466
+ C + +L T L + H+DQ++LC Y +++I++ TF++I+ Y QPQ V+
Sbjct: 805 WT-CFEHSLLHCTDLMKDRHLDQLLLCAVYIISRITKEEHTFQDIMKCYRTQPQANSHVY 863
Query: 467 RSVF------------------------------------------------DHVDIITF 478
RSV + D+I F
Sbjct: 864 RSVLIKRRPKVQQADENMEVDPPADQSNERTDQAANERTDQADRTQTVFESEERGDLIQF 923
Query: 479 YNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA---SVFPALPD--MSPKKVSATH 533
YN I+ ++ + A+ T +++ +A S FP++ +SP++VS H
Sbjct: 924 YNNIYVSKMRSFAFKY-----ALST-----LDNRMEAPPLSPFPSVRSHTLSPRRVSQKH 973
Query: 534 SVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINH 578
S++VSP + S + ++ S+ Y G SP K+L+DIN
Sbjct: 974 SIFVSPHKNS---SSLTPSTAYTYRFTG------SPSKELSDINQ 1009
>gi|402882604|ref|XP_003904828.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 1
[Papio anubis]
Length = 1067
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 40/200 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------- 82
V+TPV++A + L++I+ L + PS L N M+NI
Sbjct: 383 VITPVASATQSVSRLQSIVAGLKNAPSDQLTNIFESCVRNPMENIMKILKGMGETFCQHY 442
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R A L YK+LET+ E + LH +++ L FH ++
Sbjct: 443 TQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLEQDIFHHSLM 502
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F ++E + + F KVI+ IR EE L R++ +HLNS+EE+
Sbjct: 503 ACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQ 561
Query: 185 LLESMVWEKGSSMYNSLTVA 204
+LES+ W S+++ +L V+
Sbjct: 562 ILESLAWSHDSALWEALQVS 581
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 116/269 (43%), Gaps = 67/269 (24%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 777 GISRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 835
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------- 470
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 836 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREFVAYNK 895
Query: 471 -----------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAM 501
+ D+I FYN I+ VK A+
Sbjct: 896 NINDDFEMIDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSF---------AL 946
Query: 502 KTNRDSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSY 556
K + ++ +H DA S FP + SP+++S HS+Y+SP + + ++ S
Sbjct: 947 KYDLSNQ-DHVMDAPPLSPFPHIKQQPGSPRRISQQHSIYISPHKNG---SGLTPRSALL 1002
Query: 557 YACVGESTHAYSPFKDLTDINHRLNSNRR 585
Y G SP K L +IN+ + +
Sbjct: 1003 YKFNG------SPSKSLKEINNMIRQGEQ 1025
>gi|213982839|ref|NP_001135587.1| retinoblastoma-like 1 (p107) [Xenopus (Silurana) tropicalis]
gi|195539849|gb|AAI68105.1| Unknown (protein for MGC:186044) [Xenopus (Silurana) tropicalis]
Length = 1048
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 119/287 (41%), Gaps = 69/287 (24%)
Query: 360 SNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRT 419
S P +P + + F K+ LA+VR+ + +L +S +R ++ L +L T
Sbjct: 755 SCPTSARKPKKTGSLALFFRKVYHLASVRLRDLCLKLDVSNDLRRKIWTLF-VYSLVHCT 813
Query: 420 SLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------- 470
L + H+DQ++LC Y +AKIS+ F +I+ Y QPQ V+RSV
Sbjct: 814 DLMKDRHLDQLLLCAVYIMAKISKEERLFHDIMKCYRNQPQANSHVYRSVLLKRIPQASG 873
Query: 471 ----------------------------------DHVDIITFYNKIFAPTVKPLLVELGP 496
+ D+ITFYN ++ V+ ++
Sbjct: 874 DETSTSQDVEMTARNSSDSHPTPSGFTGSPCGNAERGDLITFYNNVYVERVRSFALKFA- 932
Query: 497 VGTAMKTNRDSEVNHNNDA---SVFPALPD--MSPKKVSATHSVYVSPLRTSEMDALISH 551
S +H DA S FP++ +SP++VS HS+YVSP + S +L H
Sbjct: 933 ----------STQDHLMDAPPLSPFPSIKQQAISPRRVSQQHSIYVSPHKNS--GSLTPH 980
Query: 552 SSKSYYACVGESTHAYSPFKDLTDINHRLNSNRRVRGALNFDDVDVD 598
++ Y SP K L DIN L +R R + D D D
Sbjct: 981 TALLY-------KFNGSPSKSLQDINSMLKQEQRSRKRIIAIDSDTD 1020
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 40/194 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQGA------NLMDNI--------------- 82
V+TPVS+A L++++ L + PS L N ++N+
Sbjct: 384 VITPVSSATQCVSRLQSMVAGLRNAPSEQLIEVFKSCVRNPLENVLNIVRDIGRRFCHHY 443
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R A L +KVLET+ E++ LH K+LT+L FH+ ++
Sbjct: 444 TQSTEDQPGSHIDFAVNRWKLAEILYFKVLETIVVQESKRLHGKDLTALLEQDIFHQSLI 503
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F +E + ++AF KVI+ FIR E+ L R++ +HLN++EE+
Sbjct: 504 ACCLEIVLFAYSS-PRTFPWTIEVLNLSAFYFYKVIEVFIRSEDGLSRDMVKHLNTIEEQ 562
Query: 185 LLESMVWEKGSSMY 198
+LES W S ++
Sbjct: 563 ILESRAWTSDSVLW 576
>gi|348563785|ref|XP_003467687.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 1-like
[Cavia porcellus]
Length = 1071
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 40/200 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------- 82
V+TPV++A + L++I+ L + PS L N M+NI
Sbjct: 383 VITPVASATQSVSRLQSIVTGLKNAPSEQLTSIFESCMRNPMENIMKIVKNIGETFCQHY 442
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R A L YK+LET+ EA+ LH +++ L FH ++
Sbjct: 443 TQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQEARRLHGMDMSVLLEQNIFHHSLM 502
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F ++E + + F +VI+ IR EE L R++ +HLNS+EE+
Sbjct: 503 ACCLEIVLFAYSS-PRTFPWIIEILNLQPFYFFQVIEVVIRSEEGLSRDMVKHLNSIEEQ 561
Query: 185 LLESMVWEKGSSMYNSLTVA 204
+LES+ W S+++ +L+ +
Sbjct: 562 ILESLAWSHNSALWEALSAS 581
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 111/261 (42%), Gaps = 63/261 (24%)
Query: 365 GGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFN 424
G +P + + + K+ LA+VR+ + +L +S +R ++ C + TL L N
Sbjct: 778 GIKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNDLRRKIWT-CFEFTLVHCPDLMKN 836
Query: 425 CHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-------------- 470
H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 837 RHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREIVTYNNE 896
Query: 471 ----------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMK 502
+ D+I FYN I+ VK ++
Sbjct: 897 ISGDFEMTDGDLEETIKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSFALKYD------L 950
Query: 503 TNRDSEVNHN---NDASVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSYY 557
+N+D V+ S FP + S +++S HS+YVSP + + ++ S Y
Sbjct: 951 SNQDHMVHFKWMLPPLSPFPHIEQQTGSXRRISQQHSIYVSPHKNG---SSLTPRSALLY 1007
Query: 558 ACVGESTHAYSPFKDLTDINH 578
G SP K L DIN+
Sbjct: 1008 KFNG------SPSKSLKDINN 1022
>gi|301758727|ref|XP_002915215.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 1-like
[Ailuropoda melanoleuca]
Length = 1151
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 44/221 (19%)
Query: 27 KTITSPLSP----HHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------A 76
KT +P +P + + V+TPV++A + +++I+ L + PS L
Sbjct: 445 KTSFAPSTPLTGRRYLREKEAVITPVASATQSVSRIQSIVAGLKNAPSEQLINIFESCMR 504
Query: 77 NLMDNI----------------------------WAEQRRLEALKLNYKVLETMCTAEAQ 108
N M+NI +A R A L YK+LET+ E +
Sbjct: 505 NPMENITKIVKGIGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETR 564
Query: 109 VLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSF 163
LH +++ L FHR ++AC E+VL + + F ++E + + F KVI+
Sbjct: 565 RLHGMDMSVLLEQDIFHRSLMACCLEVVLFAYSS-PRTFPWIIEVLNLRPFYFYKVIEVV 623
Query: 164 IRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
IR EE L R++ +HLNS+EE++LES+ W S+++ +L +
Sbjct: 624 IRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQAS 664
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 121/280 (43%), Gaps = 63/280 (22%)
Query: 360 SNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRT 419
++P G +P + + + K+ LA+VR+ + +L +S ++R ++ C + TL
Sbjct: 857 AHPTGISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCP 915
Query: 420 SLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------- 470
L + H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 916 DLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVV 975
Query: 471 ---------------------------------DHVDIITFYNKIFAPTVKPLLVELGPV 497
+ D+I FYN I+ VK ++
Sbjct: 976 AYNKNINGDFEMTDCELEDATKTPDCSNGPVKEERGDLIKFYNTIYVGRVKSFALKYD-- 1033
Query: 498 GTAMKTNRDSEVNHNNDASVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKS 555
+N+D V S FP + SP+++S HS+YVSP + + ++ S
Sbjct: 1034 ----LSNQD-HVMEAPPLSPFPHIKQQPGSPRRISQQHSIYVSPHKNG---SGLTPRSAL 1085
Query: 556 YYACVGESTHAYSPFKDLTDINH--RLNSNRRVRGALNFD 593
Y G SP K L DIN+ R R + A+ D
Sbjct: 1086 LYKFSG------SPSKSLKDINNMIRQGEQRTKKRAIAID 1119
>gi|213417847|ref|NP_035379.2| retinoblastoma-like protein 1 isoform 1 [Mus musculus]
gi|341942164|sp|Q64701.3|RBL1_MOUSE RecName: Full=Retinoblastoma-like protein 1; AltName: Full=107 kDa
retinoblastoma-associated protein; Short=p107; AltName:
Full=pRb1
gi|74217646|dbj|BAE33564.1| unnamed protein product [Mus musculus]
Length = 1063
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 40/197 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------- 82
V TPV++A + L++I+ L S PS L N M NI
Sbjct: 383 VTTPVASATQSVSRLQSIVAGLKSAPSEQLLNIFESCMRNPMGNIIKIVKGIGETFCQHY 442
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R A L YK+LET+ E + LH +++ L FH+ ++
Sbjct: 443 TQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLEQDIFHKSLM 502
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F ++E + + F KVI+ IR EE L R++ +HLNS+EE+
Sbjct: 503 ACCLEIVLFAYSS-PRTFPWIIEVLDLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQ 561
Query: 185 LLESMVWEKGSSMYNSL 201
+LES+ W S+++ +L
Sbjct: 562 ILESLAWTNNSALWEAL 578
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 63/265 (23%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G +P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 777 GVSKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 835
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------- 470
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 836 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPGGVVVYNG 895
Query: 471 -------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNR 505
+ D+I FYN ++ VK A+K +
Sbjct: 896 DCEMTDGDIEDATKTPNCSSEPVKEERGDLIKFYNTVYVGRVKSF---------ALKYDL 946
Query: 506 DSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACV 560
++ +H DA S FP + SP+++S HS+YVSP + A ++ S Y
Sbjct: 947 SNQ-DHIMDAPPLSPFPHIKQQPGSPRRISQQHSLYVSPHKNG---AGLTPRSALLYKFN 1002
Query: 561 GESTHAYSPFKDLTDINHRLNSNRR 585
G SP K L DIN+ + +
Sbjct: 1003 G------SPSKSLKDINNMIRQGEQ 1021
>gi|395505445|ref|XP_003757051.1| PREDICTED: retinoblastoma-like protein 1 [Sarcophilus harrisii]
Length = 1040
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 91/166 (54%), Gaps = 9/166 (5%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMC 103
V P+ M K + C ++ S D Q + +D +A R A L YK+LET+
Sbjct: 395 VRNPMENIMNIVKSIGEAFCQHYTQ-STDEQPGSHID--FAVNRLKLAEILYYKILETIM 451
Query: 104 TAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSK 158
E + LH +++ L FHR ++AC E+VL + + F ++E + ++ F K
Sbjct: 452 VQETRRLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSSPRS-FPWIIEVLDLSPFYFYK 510
Query: 159 VIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
VI+ IR EE L R+ +HLNS+EE++LES+ W S+++++L ++
Sbjct: 511 VIEILIRSEEGLSRDTVKHLNSIEEQILESLAWSNDSALWDALLIS 556
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 126/292 (43%), Gaps = 70/292 (23%)
Query: 352 PPPLYPTRS---NPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYC 408
P Y T+S G P + + + K+ LA+VR+ + +L +S +R ++
Sbjct: 737 PKQTYATKSLEMQQAGVSRPKRTGSLALFYRKVYHLASVRLRDLCLKLDISNDLRRKIWT 796
Query: 409 LCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRS 468
C + TL L + H+DQ++LC FY +AK+++ TF++I+ +Y QPQ V+RS
Sbjct: 797 -CFEFTLVHCFDLMKDRHLDQLLLCAFYIMAKVTKEERTFQDIMKSYRNQPQANSHVYRS 855
Query: 469 VF----------------------------------------DHVDIITFYNKIFAPTVK 488
V + D+I FYN+++ VK
Sbjct: 856 VLLKRIPKEVSTYDKNVKDNEMTECDLDCAKIPDSSTGTMKEERGDLIKFYNEVYVGRVK 915
Query: 489 PLLVELGPVGTAMKTNRDSEVNHNNDA---SVFPALPD--MSPKKVSATHSVYVSPLRTS 543
A+K + +E +H +A S FP + +SP+++S HSVYVSP +
Sbjct: 916 SF---------ALKYDLSNE-DHVMEALPLSPFPNIKQQPVSPRRISQQHSVYVSPHKNG 965
Query: 544 EMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRL--NSNRRVRGALNFD 593
A ++ + Y G SP K L DIN+ + R + AL D
Sbjct: 966 ---ACLTPRTALLYRFNG------SPSKSLKDINNMIKHGEQRSKKRALTID 1008
>gi|148674279|gb|EDL06226.1| retinoblastoma-like 1 (p107) [Mus musculus]
Length = 1075
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 40/197 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------- 82
V TPV++A + L++I+ L S PS L N M NI
Sbjct: 395 VTTPVASATQSVSRLQSIVAGLKSAPSEQLLNIFESCMRNPMGNIIKIVKGIGETFCQHY 454
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R A L YK+LET+ E + LH +++ L FH+ ++
Sbjct: 455 TQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLEQDIFHKSLM 514
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F ++E + + F KVI+ IR EE L R++ +HLNS+EE+
Sbjct: 515 ACCLEIVLFAYSS-PRTFPWIIEVLDLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQ 573
Query: 185 LLESMVWEKGSSMYNSL 201
+LES+ W S+++ +L
Sbjct: 574 ILESLAWTNNSALWEAL 590
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 63/265 (23%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G +P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 789 GVSKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 847
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------- 470
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 848 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPGGVVVYNG 907
Query: 471 -------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNR 505
+ D+I FYN ++ VK A+K +
Sbjct: 908 DCEMTDGDIEDATKTPNCSSEPVKEERGDLIKFYNTVYVGRVKSF---------ALKYDL 958
Query: 506 DSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACV 560
++ +H DA S FP + SP+++S HS+YVSP + A ++ S Y
Sbjct: 959 SNQ-DHIMDAPPLSPFPHIKQQPGSPRRISQQHSLYVSPHKNG---AGLTPRSALLYKFN 1014
Query: 561 GESTHAYSPFKDLTDINHRLNSNRR 585
G SP K L DIN+ + +
Sbjct: 1015 G------SPSKSLKDINNMIRQGEQ 1033
>gi|46812636|gb|AAH69179.1| Rbl1 protein, partial [Mus musculus]
Length = 682
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 40/197 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------- 82
V TPV++A + L++I+ L S PS L N M NI
Sbjct: 2 VTTPVASATQSVSRLQSIVAGLKSAPSEQLLNIFESCMRNPMGNIIKIVKGIGETFCQHY 61
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R A L YK+LET+ E + LH +++ L FH+ ++
Sbjct: 62 TQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLEQDIFHKSLM 121
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F ++E + + F KVI+ IR EE L R++ +HLNS+EE+
Sbjct: 122 ACCLEIVLFAYSS-PRTFPWIIEVLDLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQ 180
Query: 185 LLESMVWEKGSSMYNSL 201
+LES+ W S+++ +L
Sbjct: 181 ILESLAWTNNSALWEAL 197
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 116/265 (43%), Gaps = 63/265 (23%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G +P + + + K+ LA+VR+ + +L S ++R ++ C + TL L
Sbjct: 396 GVSKPKRTGSLALFYRKVYHLASVRLRDLCLKLDFSNELRRKIWT-CFEFTLVHCPDLMK 454
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------- 470
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 455 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPGGVVVYNG 514
Query: 471 -------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNR 505
+ D+I FYN ++ VK A+K +
Sbjct: 515 DCEMTDGDIEDATKTPNCSSEPVKEERGDLIKFYNTVYVGRVKSF---------ALKYDL 565
Query: 506 DSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACV 560
++ +H DA S FP + SP+++S HS+YVSP + A ++ S Y
Sbjct: 566 SNQ-DHIMDAPPLSPFPHIKQQPGSPRRISQQHSLYVSPHKNG---AGLTPRSALLYKFN 621
Query: 561 GESTHAYSPFKDLTDINHRLNSNRR 585
G SP K L DIN+ + +
Sbjct: 622 G------SPSKSLKDINNMIRQGEQ 640
>gi|417405745|gb|JAA49574.1| Putative rb retinoblastoma tumor suppressor-related protein
[Desmodus rotundus]
Length = 1067
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 109/221 (49%), Gaps = 26/221 (11%)
Query: 6 FGGAVNITGAK--RKFDSLASPVKTITSPLSPHHSSTSKM---------------VVTPV 48
F + +TG + R+ ++ +PV + T +S S + M + P+
Sbjct: 364 FAPSTPLTGRRYLREKEAAITPVASATQSVSRLQSVVTGMKNAPSEQLTSIFESCMRNPM 423
Query: 49 STAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQ 108
M K + C ++ S D Q + +D +A R A L YK+LET+ E +
Sbjct: 424 ENIMKIVKEIGETFCQHYTQ-STDEQPGSHID--FAVNRLKLAEILYYKILETVMVQETR 480
Query: 109 VLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSF 163
LH +++ L FHR ++AC E+VL + + F ++E + + F KVI+
Sbjct: 481 RLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVV 539
Query: 164 IRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
IR EE L R++ +HLNS+EE++LES+ W S+++ +L +
Sbjct: 540 IRSEEGLSRDMVKHLNSIEEQILESLAWNHNSALWEALQAS 580
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 121/282 (42%), Gaps = 69/282 (24%)
Query: 361 NPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTS 420
+P G P + + + K+ LA+VR+ + +L +S ++R ++ C + TL
Sbjct: 774 HPTGLSRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPD 832
Query: 421 LFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---------- 470
L + H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 833 LMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVT 892
Query: 471 --------------------------------DHVDIITFYNKIFAPTVKPLLVELGPVG 498
+ D+I FYN ++ VK
Sbjct: 893 YDKKINGDFEMTDCDLEDGTNTPDCSSAPVREERGDLIKFYNTVYVGRVKSF-------- 944
Query: 499 TAMKTNRDSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSS 553
A+K + ++ +H +A S FP + SP+++S HS+YVSP + ++ +
Sbjct: 945 -ALKYDLSNQ-DHMMEAPPLSPFPYIKQQPGSPRRISQQHSIYVSPHKNGPG---LTPRT 999
Query: 554 KSYYACVGESTHAYSPFKDLTDINH--RLNSNRRVRGALNFD 593
Y G SP K L DIN+ R R + A+ D
Sbjct: 1000 ALLYKFNG------SPSKSLKDINNMIRQGEQRTKKRAIAID 1035
>gi|37994624|gb|AAH60124.1| Retinoblastoma-like 1 (p107) [Mus musculus]
Length = 1063
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 40/197 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------- 82
V TPV++A + L++I+ L S PS L N M NI
Sbjct: 383 VTTPVASATQSVSRLQSIVAGLKSAPSEQLLNIFESCMRNPMGNIIKIVKGIGETFCQHY 442
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R A L YK+LET+ E + LH +++ L FH+ ++
Sbjct: 443 TQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLEQDIFHKSLM 502
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F ++E + + F KVI+ IR EE L R++ +HLNS+EE+
Sbjct: 503 ACCLEIVLFAYSS-PRTFPWIIEVLDLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQ 561
Query: 185 LLESMVWEKGSSMYNSL 201
+LES+ W S+++ +L
Sbjct: 562 ILESLAWTNNSALWEAL 578
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 63/265 (23%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G +P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 777 GVSKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 835
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------- 470
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 836 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPGGVVVYNG 895
Query: 471 -------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNR 505
+ D+I FYN ++ VK A+K +
Sbjct: 896 DCEMTDGDIEDATKTPNCSSEPVKEERGDLIKFYNTVYVGRVKSF---------ALKYDL 946
Query: 506 DSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACV 560
++ +H DA S FP + SP+++S HS+YVSP + A ++ S Y
Sbjct: 947 SNQ-DHIMDAPPLSPFPHIKQQPGSPRRISQQHSLYVSPHKNG---AGLTPRSALLYKFN 1002
Query: 561 GESTHAYSPFKDLTDINHRLNSNRR 585
G SP K L DIN+ + +
Sbjct: 1003 G------SPSKSLKDINNMIRQGEQ 1021
>gi|74151037|dbj|BAE27648.1| unnamed protein product [Mus musculus]
Length = 817
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 40/197 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------- 82
V TPV++A + L++I+ L S PS L N M NI
Sbjct: 383 VTTPVASATQSVSRLQSIVAGLKSAPSEQLLNIFESCMRNPMGNIIKIVKGIGETFCQHY 442
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R A L YK+LET+ E + LH +++ L FH+ ++
Sbjct: 443 TQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLEQDIFHKSLM 502
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F ++E + + F KVI+ IR EE L R++ +HLNS+EE+
Sbjct: 503 ACCLEIVLFAYSS-PRTFPWIIEVLDLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQ 561
Query: 185 LLESMVWEKGSSMYNSL 201
+LES+ W S+++ +L
Sbjct: 562 ILESLAWTNNSALWEAL 578
>gi|1871225|gb|AAB53235.1| p107 [Mus musculus]
Length = 1063
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 40/197 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------- 82
V TPV++A + L++I+ L S PS L N M NI
Sbjct: 383 VTTPVASATQSVSRLQSIVAGLKSAPSEQLLNIFESCMRNPMGNIIKIVKGIGETFCQHY 442
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R A L YK+LET+ E + LH +++ L FH+ ++
Sbjct: 443 TQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLEQDIFHKSLM 502
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F ++E + + F KVI+ IR EE L R++ +HLNS+EE+
Sbjct: 503 ACCLEIVLFAYSS-PRTFPWIIEVLDLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQ 561
Query: 185 LLESMVWEKGSSMYNSL 201
+LES+ W S+++ +L
Sbjct: 562 ILESLAWTNNSALWEAL 578
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 63/265 (23%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G +P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 777 GVSKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 835
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------- 470
+ H+DQ++LC FY +AK+++ TF+E + +Y QPQ V+RSV
Sbjct: 836 DRHLDQLLLCAFYIMAKVTKEERTFQERMKSYRNQPQANSHVYRSVLLKSIPGGVVVYNG 895
Query: 471 -------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNR 505
+ D+I FYN ++ VK A+K +
Sbjct: 896 DCEMTDGDIEDATKTPNCSSEPVKEERGDLIKFYNTVYVGRVKSF---------ALKYDL 946
Query: 506 DSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACV 560
++ +H DA S FP + SP+++S HS+YVSP + A ++ S Y
Sbjct: 947 SNQ-DHIMDAPPLSPFPHIKQQPGSPRRISQQHSLYVSPHKNG---AGLTPRSALLYKFN 1002
Query: 561 GESTHAYSPFKDLTDINHRLNSNRR 585
G SP K L DIN+ + +
Sbjct: 1003 G------SPSKSLKDINNMIRQGEQ 1021
>gi|403281366|ref|XP_003932159.1| PREDICTED: retinoblastoma-like protein 1 [Saimiri boliviensis
boliviensis]
Length = 1115
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 110/221 (49%), Gaps = 26/221 (11%)
Query: 6 FGGAVNITGAK--RKFDSLASPVKTITSPLSPHHSSTSKM---------------VVTPV 48
F + +TG + R+ ++L +PV + T +S S + + V P+
Sbjct: 412 FAPSTPLTGRRYLREKEALITPVASATQSVSRLQSIVAGLKNAPSEQLLNIFESCVRNPM 471
Query: 49 STAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQ 108
M K + C ++ S D Q + +D +A R A L YK+LET+ E +
Sbjct: 472 ENIMKILKGIGETFCQHYTQ-STDEQPGSHID--FAVNRLKLAEILYYKILETIMVQETR 528
Query: 109 VLHAKNLT-----SLFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSF 163
LH +++ +FH ++AC E+VL + + F ++E + + F KVI+
Sbjct: 529 RLHGMDMSLLLEQDIFHYSLMACCLEIVLFAYSS-PRTFPWIIEILNLQPFYFYKVIEVV 587
Query: 164 IRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
IR EE L R++ +HLNS+EE++LES+ W S+++ +L V+
Sbjct: 588 IRSEEGLSRDMVKHLNSIEEQILESLAWSHNSALWEALQVS 628
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 122/282 (43%), Gaps = 69/282 (24%)
Query: 361 NPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTS 420
+P G +P + + + K+ LA+VR+ + +L +S ++R ++ C + TL
Sbjct: 822 HPTGISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPD 880
Query: 421 LFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---------- 470
L + H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 881 LMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVA 940
Query: 471 --------------------------------DHVDIITFYNKIFAPTVKPLLVELGPVG 498
+ D+I FYN I+ VK
Sbjct: 941 YNKKINDDFEMIDCDLEDAAKTPDCSNGPVKEERGDLIKFYNTIYVGRVKSF-------- 992
Query: 499 TAMKTNRDSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSS 553
A+K + ++ +H D S FP + SP+++S HS+YVSP + + ++ S
Sbjct: 993 -ALKYDLSNQ-DHVMDVPPLSPFPHIKQQPGSPRRISQQHSIYVSPHKNG---SGLTPRS 1047
Query: 554 KSYYACVGESTHAYSPFKDLTDINH--RLNSNRRVRGALNFD 593
Y G SP K L DIN+ R R + A+ D
Sbjct: 1048 ALLYKFNG------SPSKSLKDINNMIRQGEQRTKKRAIAID 1083
>gi|334310911|ref|XP_003339554.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 1-like
[Monodelphis domestica]
Length = 1066
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 90/163 (55%), Gaps = 9/163 (5%)
Query: 47 PVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAE 106
P+ M K + C ++ S D Q + +D +A R A L YK+LET+ E
Sbjct: 424 PMENIMNIVKGIGEAFCQHYTQ-STDEQPGSHID--FAVNRLKLAEILYYKILETIMVQE 480
Query: 107 AQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQ 161
+ LH +++ L FHR ++AC E+VL + + F ++E + ++ F KVI+
Sbjct: 481 TRRLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSS-PRSFPWIIEVLDLSPFYFYKVIE 539
Query: 162 SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
IR EE L R+ +HLNS+EE++LES+ W S+++++L ++
Sbjct: 540 VLIRSEEGLSRDTVKHLNSIEEQILESLAWSSDSALWDALHIS 582
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 117/277 (42%), Gaps = 65/277 (23%)
Query: 363 GGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLF 422
G P + + + K+ LA+VR+ + +L +S +R ++ C + TL L
Sbjct: 777 AGINRPKKTGSLALFYRKVYHLASVRLRDLCLKLDVSNDLRRKIWT-CFEFTLVHCFDLM 835
Query: 423 FNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------ 470
+ H+DQ++LC FY +AK+++ TF++I+ +Y QPQ V+RSV
Sbjct: 836 KDRHLDQLLLCAFYIMAKVTKEERTFQDIMKSYRNQPQANSHVYRSVLLKRIPVEVSTCN 895
Query: 471 ----------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMK 502
+ D+I FYN+++ VK A+K
Sbjct: 896 KNVKDTEMIDYDLDCAKIPDSSTGSMKEERGDLIKFYNEVYVGRVKSF---------ALK 946
Query: 503 TNRDSEVN--HNNDASVFPALPD--MSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYA 558
+ +E N S FP + +SP+++S HSVYVSP + ++ + Y
Sbjct: 947 YDLSNEENVIEAPPLSPFPNIKQQPVSPRRISQQHSVYVSPHKNG---TCLTPRTALLYK 1003
Query: 559 CVGESTHAYSPFKDLTDINHRL--NSNRRVRGALNFD 593
G SP K L DIN+ + R + AL D
Sbjct: 1004 FNG------SPSKSLKDINNMIKHGEQRSKKRALTID 1034
>gi|291236043|ref|XP_002737957.1| PREDICTED: retinoblastoma-like protein 1-like, partial
[Saccoglossus kowalevskii]
Length = 855
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 25/206 (12%)
Query: 17 RKFDSLASPVKTITSP-------LSPHHSSTSKMVVT--------PVSTAMTTAKWLRTI 61
++ D +PV T T L+ H + S ++VT P+ T K L I
Sbjct: 154 KEKDPTVTPVSTATQGVSRLQALLAGHKTGPSDLLVTLFRDCSENPLDTVCKRIKELGEI 213
Query: 62 ICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAK-NLTSL-- 118
C ++PS D G+++ +A++R A L +K LE + AE + L AK +LTSL
Sbjct: 214 FCEKYAQPSEDHPGSHI---DFAKRRFCMAESLYFKALENIMQAEKKRLGAKFDLTSLLS 270
Query: 119 ---FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELR 175
FH+ + AC E+V+ ++ + F V++ + ++ KVI+ IR E+ L R++
Sbjct: 271 HDVFHKSLFACCQEVVIFSYNS-QRTFPWVIDIYHLAPYHFYKVIELLIRAEDGLSRDVV 329
Query: 176 RHLNSLEERLLESMVWEKGSSMYNSL 201
+HLN +EE++LES+ W+ S ++ ++
Sbjct: 330 KHLNHIEEQILESLAWKYDSPLWEAM 355
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P + + F K+ LA VR+ + RL++ +R ++ C + +L L + H
Sbjct: 531 KPKRTGSLGLFFRKVYHLANVRLLELCNRLEIVDDLRRKIWT-CFEHSLVHSVDLMMDRH 589
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
+DQ+++C Y + K++ + TF+EI+ Y QPQ V+RSV
Sbjct: 590 LDQLLMCAVYVICKVTAQDRTFQEIMKCYRLQPQAASHVYRSVL 633
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 59/128 (46%), Gaps = 18/128 (14%)
Query: 471 DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPD--MSPKK 528
D D+I FYN IF ++ + A + ++ S P + +SP++
Sbjct: 706 DRGDLIKFYNSIFVRKIQLFAMRFSAQNGAAEGGLEAP-----PLSPLPLVKSHPVSPRR 760
Query: 529 VSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNRRVRG 588
VS+ H VY+SP + S +S SS+ Y C SP K+L DIN+ + S R G
Sbjct: 761 VSSQHQVYISPRKNS---TPLSPSSRMMY-CFNR-----SPSKNLRDINNMIKSGERPIG 811
Query: 589 --ALNFDD 594
AL DD
Sbjct: 812 KRALLQDD 819
>gi|354469450|ref|XP_003497142.1| PREDICTED: retinoblastoma-like protein 1 [Cricetulus griseus]
Length = 1063
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 40/197 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------- 82
V TPV++A + L++I+ L + PS L N ++NI
Sbjct: 383 VTTPVASATQSVSRLQSIVAGLKNAPSEQLLNIFESCMRNPLENITKIVKGIGETFCQHY 442
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R A L YK+LET+ E + LH +++ L FHR ++
Sbjct: 443 TQSTDKQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLEQDIFHRSLM 502
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F ++E + + F KVI+ IR EE L R++ +HLNS+EE+
Sbjct: 503 ACCLEIVLFAYSS-PRTFPWIIEVLDLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQ 561
Query: 185 LLESMVWEKGSSMYNSL 201
+LES+ W S+++ +L
Sbjct: 562 ILESLAWSSNSALWEAL 578
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 63/265 (23%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G +P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 777 GISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 835
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------- 470
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 836 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVAYNG 895
Query: 471 -------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNR 505
+ D+I FYN I+ VK A+K +
Sbjct: 896 DCEMTDGDIEDATKTPNCSSEPVKEERGDLIKFYNTIYVGRVKSF---------ALKYDL 946
Query: 506 DSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACV 560
++ +H DA S FP + SP+++S HS+YVSP + + ++ S Y
Sbjct: 947 SNQ-DHIVDAPPLSPFPHIKQQPGSPRRISQQHSIYVSPHKNG---SGLTPRSALLYKFN 1002
Query: 561 GESTHAYSPFKDLTDINHRLNSNRR 585
G SP K L DIN+ + +
Sbjct: 1003 G------SPSKSLKDINNMIRQGEQ 1021
>gi|391340370|ref|XP_003744515.1| PREDICTED: retinoblastoma-like protein 1-like [Metaseiulus
occidentalis]
Length = 885
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 115/271 (42%), Gaps = 60/271 (22%)
Query: 352 PPPLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCP 411
P P P + G G + F K+ LA+VR+ + L+++ + + +
Sbjct: 624 PEPPAPADAVRGSWG---------LFFRKVYHLASVRLRHLCNGLRITDEHLTKAWTMLE 674
Query: 412 KRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF- 470
+N+ T++ + H+DQIIL C Y + K+ +LN F +I Y QP + QV+RSV
Sbjct: 675 HVLINE-TTILKDRHLDQIILSCVYALCKLFKLNKKFSDITQCYRSQPNTQNQVYRSVLI 733
Query: 471 -----------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNN 513
DIITFYNKIF P V P L RD N
Sbjct: 734 QSAVEAPADGNGEAQDEQRSDIITFYNKIFVPRVHPFLARF----------RDDSAP-NP 782
Query: 514 DASVFP----ALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSP 569
S P L P KV+ V+VSP + + +H++K++ SP
Sbjct: 783 LLSPLPRINSGLQSPKPLKVATDMKVFVSPYKG---NIPSTHNAKTFRI-------QQSP 832
Query: 570 FKDLTDIN-------HRLNSNRRVRGALNFD 593
KDLT+IN +N+ R + AL+ D
Sbjct: 833 AKDLTEINRMVQRKSEEMNAVRASKRALDMD 863
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 22/202 (10%)
Query: 24 SPVKTITSPLSPHHS-----------STSKMVV----TPVSTAMTTAKWLRTIICPLPSK 68
SPV T T S HS S S+M+ P T K + + C +
Sbjct: 377 SPVSTATQGASKLHSLLAGRNHMPSESLSQMLAQIIPNPAERIDQTIKEMGELFCTAYAN 436
Query: 69 PSADLQGANLMDNIWAEQRRLE-ALKLNYKVLETMCTAEAQVLHAKNLTSL------FHR 121
D + D ++RL+ L Y +LE++ T E N SL F +
Sbjct: 437 REDDAEAPTNPDLFDFAKKRLQLGEALFYTILESIITLEQNPQRTLNNFSLSLRQEQFQK 496
Query: 122 CMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSL 181
+ A E+V+ ++ + LF +L G+ ++ ++I+ IR E L RE+ +H N +
Sbjct: 497 SLFASCLEIVMYSYNSQETLFPWILNIFGLKGYHYYRIIEPMIRAEVRLSREVVKHFNKI 556
Query: 182 EERLLESMVWEKGSSMYNSLTV 203
EE++ ES+ W S ++ + V
Sbjct: 557 EEQIFESIAWRSDSPVWEQVGV 578
>gi|395829401|ref|XP_003787848.1| PREDICTED: retinoblastoma-like protein 1, partial [Otolemur
garnettii]
Length = 864
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 40/200 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQGA------NLMDNI--------------- 82
V+TPV++A + L++I+ L + PS L N ++NI
Sbjct: 383 VITPVASATQSVSRLQSIVAGLKNAPSEQLINIFESCIRNPLENIMKIVKGIGETFCQHY 442
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R A L YK+LET+ E + LH +++ L FHR ++
Sbjct: 443 TQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLEQDIFHRSLM 502
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F ++E + + F KVI+ IR EE L R++ +HLNS+EE+
Sbjct: 503 ACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQ 561
Query: 185 LLESMVWEKGSSMYNSLTVA 204
+LES+ W S+++ +L +
Sbjct: 562 ILESLAWSHDSALWEALQAS 581
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 4/122 (3%)
Query: 352 PPPLYPTRS---NPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYC 408
P P + T++ +P +P + + + K+ LA+ R+ + +L +S ++R ++
Sbjct: 720 PKPTHLTKAQEVHPTVISKPKRTGSLALFYRKVYHLASARLRDLCLKLDVSNELRRKIWT 779
Query: 409 LCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRS 468
C + TL L + H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RS
Sbjct: 780 -CFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRS 838
Query: 469 VF 470
V
Sbjct: 839 VL 840
>gi|344241870|gb|EGV97973.1| Retinoblastoma-like protein 1 [Cricetulus griseus]
Length = 984
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 40/197 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------- 82
V TPV++A + L++I+ L + PS L N ++NI
Sbjct: 304 VTTPVASATQSVSRLQSIVAGLKNAPSEQLLNIFESCMRNPLENITKIVKGIGETFCQHY 363
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R A L YK+LET+ E + LH +++ L FHR ++
Sbjct: 364 TQSTDKQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLEQDIFHRSLM 423
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F ++E + + F KVI+ IR EE L R++ +HLNS+EE+
Sbjct: 424 ACCLEIVLFAYSS-PRTFPWIIEVLDLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQ 482
Query: 185 LLESMVWEKGSSMYNSL 201
+LES+ W S+++ +L
Sbjct: 483 ILESLAWSSNSALWEAL 499
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 63/265 (23%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G +P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 698 GISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 756
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------- 470
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 757 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVAYNG 816
Query: 471 -------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNR 505
+ D+I FYN I+ VK A+K +
Sbjct: 817 DCEMTDGDIEDATKTPNCSSEPVKEERGDLIKFYNTIYVGRVKSF---------ALKYDL 867
Query: 506 DSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACV 560
++ +H DA S FP + SP+++S HS+YVSP + + ++ S Y
Sbjct: 868 SNQ-DHIVDAPPLSPFPHIKQQPGSPRRISQQHSIYVSPHKNG---SGLTPRSALLYKFN 923
Query: 561 GESTHAYSPFKDLTDINHRLNSNRR 585
G SP K L DIN+ + +
Sbjct: 924 G------SPSKSLKDINNMIRQGEQ 942
>gi|194224386|ref|XP_001499565.2| PREDICTED: retinoblastoma-like protein 1 [Equus caballus]
Length = 1068
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 44/221 (19%)
Query: 27 KTITSPLSP----HHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------A 76
KT +P +P + + V+TPV++A + L+ I+ L + PS L
Sbjct: 362 KTSFAPSTPLTGRRYLREKEAVITPVASATQSVSRLQGIVAGLKNAPSEQLINIFESCMR 421
Query: 77 NLMDNI----------------------------WAEQRRLEALKLNYKVLETMCTAEAQ 108
N M+NI +A R A L YK+LET+ E +
Sbjct: 422 NPMENIMKIVKGIGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETIMVQETR 481
Query: 109 VLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSF 163
LH +++ L FHR ++AC E+VL + + F ++E + + F KVI+
Sbjct: 482 RLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSS-PRTFPWIVEVLNLQPFYFYKVIEVV 540
Query: 164 IRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
IR EE L R++ +HLN +EE++LES+ W S+++ +L +
Sbjct: 541 IRSEEGLSRDMVKHLNGVEEQILESLAWSHNSALWEALQAS 581
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 130/298 (43%), Gaps = 73/298 (24%)
Query: 352 PPPLYPTRS---NPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYC 408
P +P+++ +P G +P + + + K+ LA+VR+ + +L +S ++ ++
Sbjct: 763 PKQTHPSKAQEVHPTGVNKPKRTGSLALFYRKVYHLASVRLRDLCVKLDVSNELLRKIWT 822
Query: 409 LCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRS 468
C + TL L + H+DQ++LC FY +A++++ TF+EII +Y QPQ V+RS
Sbjct: 823 -CFEFTLVHCPDLMKDRHLDQLLLCAFYIMAQVTKEERTFQEIIKSYRNQPQANSHVYRS 881
Query: 469 VF------------------------------------------DHVDIITFYNKIFAPT 486
V + D+I FYN I+
Sbjct: 882 VLLKSIPTEVVAYNKNVNGDFEMRDCDLEDATKTPDCSIGPVKEERADLIKFYNTIYLGR 941
Query: 487 VKPLLVELGPVGTAMKTNRDSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLR 541
V+ A+K + ++ +H +A S FP + SP+++S HS+YVSP +
Sbjct: 942 VEAF---------ALKYDLSNQ-DHVMEAPPLSPFPHIKQQPGSPRRISQQHSIYVSPHK 991
Query: 542 TSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINH--RLNSNRRVRGALNFD-DVD 596
++ S Y G SP K L DIN+ R R + A+ D DV+
Sbjct: 992 NGPG---LTPRSALLYKFNG------SPSKSLKDINNMIRQGEQRTKKRAIAIDGDVE 1040
>gi|350594907|ref|XP_001925314.4| PREDICTED: retinoblastoma-like protein 1 [Sus scrofa]
Length = 979
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 44/221 (19%)
Query: 27 KTITSPLSP----HHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------A 76
KT +P +P + + V+TPV++A + L++I+ L + PS L
Sbjct: 362 KTSFAPSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSEQLINIFESCMR 421
Query: 77 NLMDNI----------------------------WAEQRRLEALKLNYKVLETMCTAEAQ 108
N M+NI +A R A L YK+LET+ E +
Sbjct: 422 NPMENIMKIVKGIGEAFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETIMVQETR 481
Query: 109 VLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSF 163
LH +++ L FH ++AC E+VL + + F ++E + + F KVI+
Sbjct: 482 RLHGMDMSVLLEQDIFHHSLMACCLEIVLFAYSS-PRTFPWIIEVLNLRPFYFYKVIEVV 540
Query: 164 IRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
IR EE L R++ +HLNS+EE++LES+ W S+++ +L +
Sbjct: 541 IRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQAS 581
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 117/279 (41%), Gaps = 63/279 (22%)
Query: 361 NPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTS 420
+P G +P + + + K+ LA+VR+ + +L +S ++R ++ C + TL
Sbjct: 686 HPIGISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPD 744
Query: 421 LFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---------- 470
L + H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 745 LMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREAMA 804
Query: 471 --------------------------------DHVDIITFYNKIFAPTVKPLLVELGPVG 498
+ D+I FYN I+ VK ++
Sbjct: 805 YNKNLNGDFEMTDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSFALKYD--- 861
Query: 499 TAMKTNRDSEVNHNNDASVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSY 556
+N D V S FP + SP+++S HS+YVSP + + S
Sbjct: 862 ---LSNHD-HVMEAPPLSPFPHIKQQPGSPRRISQQHSIYVSPHKNGSGP---TPRSALL 914
Query: 557 YACVGESTHAYSPFKDLTDINH--RLNSNRRVRGALNFD 593
Y G SP K L DIN+ R R + A+ D
Sbjct: 915 YKFNG------SPSKSLKDINNMIRQGEQRTKKRAIAID 947
>gi|213417872|ref|NP_001132988.1| retinoblastoma-like protein 1 isoform 2 [Mus musculus]
gi|1871227|gb|AAB53236.1| p68 [Mus musculus]
Length = 594
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 41/212 (19%)
Query: 30 TSPLSPHHSSTSK-MVVTPVSTAMTTAKWLRTIICPLPSKPSADLQGA------NLMDNI 82
++PL+ K V TPV++A + L++I+ L S PS L N M NI
Sbjct: 368 STPLTGRRYLQEKEAVTTPVASATQSVSRLQSIVAGLKSAPSEQLLNIFESCMRNPMGNI 427
Query: 83 ----------------------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKN 114
+A R A L YK+LET+ E + LH +
Sbjct: 428 IKIVKGIGETFCQHYTQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMD 487
Query: 115 LTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEES 169
++ L FH+ ++AC E+VL + + F ++E + + F KVI+ IR EE
Sbjct: 488 MSVLLEQDIFHKSLMACCLEIVLFAYSS-PRTFPWIIEVLDLQPFYFYKVIEVVIRSEEG 546
Query: 170 LPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
L R++ +HLNS+EE++LES+ W S+++ +L
Sbjct: 547 LSRDMVKHLNSIEEQILESLAWTNNSALWEAL 578
>gi|26329065|dbj|BAC28271.1| unnamed protein product [Mus musculus]
Length = 594
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 41/212 (19%)
Query: 30 TSPLSPHHSSTSK-MVVTPVSTAMTTAKWLRTIICPLPSKPSADLQGA------NLMDNI 82
++PL+ K V TPV++A + L++I+ L S PS L N M NI
Sbjct: 368 STPLTGRRYLQEKEAVTTPVASATQSVSRLQSIVAGLKSAPSEQLLNIFESCMRNPMGNI 427
Query: 83 ----------------------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKN 114
+A R A L YK+LET+ E + LH +
Sbjct: 428 IKIVKGIGETFCQHYTQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMD 487
Query: 115 LTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEES 169
++ L FH+ ++AC E+VL + + F ++E + + F KVI+ IR EE
Sbjct: 488 MSVLLEQDIFHKSLMACCLEIVLFAYSS-PRTFPWIIEVLDLQPFYFYKVIEVVIRSEEG 546
Query: 170 LPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
L R++ +HLNS+EE++LES+ W S+++ +L
Sbjct: 547 LSRDMVKHLNSIEEQILESLAWTNNSALWEAL 578
>gi|2137620|pir||I49329 retinoblastoma-associated protein homolog p68 - mouse
Length = 592
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 41/212 (19%)
Query: 30 TSPLSPHHSSTSK-MVVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI 82
++PL+ K V TPV++A + L++I+ L S PS L N M NI
Sbjct: 366 STPLTGRRYLQEKEAVTTPVASATQSVSRLQSIVAGLKSAPSEQLLNIFESCMRNPMGNI 425
Query: 83 ----------------------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKN 114
+A R A L YK+LET+ E + LH +
Sbjct: 426 IKIVKGIGETFCQHYTQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMD 485
Query: 115 LTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEES 169
++ L FH+ ++AC E+VL + + F ++E + + F KVI+ IR EE
Sbjct: 486 MSVLLEQDIFHKSLMACCLEIVLFAYSS-PRTFPWIIEVLDLQPFYFYKVIEVVIRSEEG 544
Query: 170 LPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
L R++ +HLNS+EE++LES+ W S+++ +L
Sbjct: 545 LSRDMVKHLNSIEEQILESLAWTNNSALWEAL 576
>gi|426241455|ref|XP_004014606.1| PREDICTED: retinoblastoma-like protein 1 [Ovis aries]
Length = 1066
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 40/200 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------- 82
V+TPV++A + L++I+ L + PS L N M+NI
Sbjct: 381 VITPVASATQSVSRLQSIVAGLKNAPSEQLINIFESCMRNPMENIMKIVKGIGETFCQHY 440
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R A L YK+LET+ E + LH +++ L FH ++
Sbjct: 441 TQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLEQDIFHHSLM 500
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F ++E + + F KVI+ IR EE L R++ +HLNS+EE+
Sbjct: 501 ACCLEIVLFAYSS-PRTFPWIIEVLNLRPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQ 559
Query: 185 LLESMVWEKGSSMYNSLTVA 204
+LES+ W S+++ +L +
Sbjct: 560 ILESLAWSHDSALWEALQAS 579
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 120/279 (43%), Gaps = 63/279 (22%)
Query: 361 NPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTS 420
+P G +P + + + K+ LA+VR+ + +L +S ++R ++ C + TL
Sbjct: 773 HPVGISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPD 831
Query: 421 LFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---------- 470
L + H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 832 LMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVA 891
Query: 471 --------------------------------DHVDIITFYNKIFAPTVKPLLVELGPVG 498
+ D+I FYN I+ VK ++
Sbjct: 892 YNKNLNGDFEMTDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSFALKYD--- 948
Query: 499 TAMKTNRDSEVNHNNDASVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSY 556
+N+D V S FP + SP+++S HS+YVSP + + ++ S
Sbjct: 949 ---LSNQD-HVMEAPPLSPFPHIKQQPGSPRRISQQHSIYVSPHKNG---SGLTPRSALL 1001
Query: 557 YACVGESTHAYSPFKDLTDINH--RLNSNRRVRGALNFD 593
Y G SP K L DIN+ R R + A+ D
Sbjct: 1002 YKFNG------SPSKSLKDINNMIRQGEQRTKKRAITID 1034
>gi|55140503|gb|AAV41810.1| retinoblastoma-like protein [Chlamydomonas incerta]
Length = 1213
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 49/227 (21%)
Query: 22 LASPVKTITSPLSPHH-SSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSADLQ------ 74
L P + SPL H ++ + TP+S AM + WLR + + ++PS LQ
Sbjct: 398 LMGPAPWLHSPLPMMHLNAGPGLQGTPISEAMGASAWLRGVTSSMAAEPSPALQRLLAAL 457
Query: 75 -----GAN--------------------------------LMDNIWAEQRRLEALKLNYK 97
G +++ + +RR +A +L
Sbjct: 458 PINSTGLGPTPAQLLMKRVRDLVASVIPDEAAPSVLGPFPMLNTSFGAERRTQAARLYCH 517
Query: 98 VLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGIT 152
LET+ E + +L F R ++AC E+V A ++ + F V++ + I
Sbjct: 518 SLETIMLNEERTNGLPAALALLGSAKFQRGLIACCIEVVAACYRMSSCAFPKVVDALRIK 577
Query: 153 AFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 199
AF+++ +I +F++ +LPREL+RHL +EE++LE + W+ GSS+Y+
Sbjct: 578 AFDMASIIGTFVKSIATLPRELKRHLFLIEEKILECLAWQPGSSLYH 624
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 80/153 (52%), Gaps = 26/153 (16%)
Query: 362 PGGGGEPCAETGINICFC-KINKLAAVRINAM--------VERLQLSQQIRESVYCLCPK 412
P G + G+ F K+ KL + R+ + +ER ++S ++ E++ +
Sbjct: 806 PPAAGTAHGQAGLLFEFLRKVLKLTSFRLALLCENVDFGPLERPEVSSKVYETI-----E 860
Query: 413 RTLNQRTSLFFNCHIDQIILCCFYGVAKISQLN-LTFKEIIYNYGKQPQCKPQVFRSVF- 470
L ++T LF+N HIDQ++L YG K+ +L+ ++F+EII Y KQPQ + VFRSV
Sbjct: 861 HALYKQTHLFYNRHIDQVMLSTLYGYCKVHKLSQVSFREIIAQYRKQPQAQQSVFRSVVI 920
Query: 471 ----------DHVDIITFYNKIFAPTVKPLLVE 493
DII FYN +F P +K L++
Sbjct: 921 EQSMPTLQIQSRADIIAFYNAVFVPAMKSFLLK 953
>gi|300797402|ref|NP_001179531.1| retinoblastoma-like protein 1 [Bos taurus]
gi|440905887|gb|ELR56207.1| Retinoblastoma-like protein 1 [Bos grunniens mutus]
Length = 1068
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 44/221 (19%)
Query: 27 KTITSPLSP----HHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------A 76
KT +P +P + + V+TPV++A + L++I+ L + PS L
Sbjct: 362 KTSFAPSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSEQLINIFESCMR 421
Query: 77 NLMDNI----------------------------WAEQRRLEALKLNYKVLETMCTAEAQ 108
N M+NI +A R A L YK+LET+ E +
Sbjct: 422 NPMENIMKIVKGIGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETR 481
Query: 109 VLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSF 163
LH +++ L FH ++AC E+VL + + F ++E + + F KVI+
Sbjct: 482 RLHGMDMSVLLEQDIFHHSLMACCLEIVLFAYSS-PRTFPWIIEVLNLRPFYFYKVIEVV 540
Query: 164 IRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
IR EE L R++ +HLNS+EE++LES+ W S+++ +L +
Sbjct: 541 IRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQAS 581
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 120/279 (43%), Gaps = 63/279 (22%)
Query: 361 NPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTS 420
+P G +P + + + K+ LA+VR+ + +L +S ++R ++ C + TL
Sbjct: 775 HPIGISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPD 833
Query: 421 LFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---------- 470
L + H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 834 LMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVA 893
Query: 471 --------------------------------DHVDIITFYNKIFAPTVKPLLVELGPVG 498
+ D+I FYN I+ VK ++
Sbjct: 894 YSKNLNGDFEMTDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSFALKYD--- 950
Query: 499 TAMKTNRDSEVNHNNDASVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSY 556
+N+D V S FP + SP+++S HS+YVSP + + ++ S
Sbjct: 951 ---LSNQD-HVMEAPPLSPFPHIKQQPGSPRRISQQHSIYVSPHKNG---SGLTPRSALL 1003
Query: 557 YACVGESTHAYSPFKDLTDINH--RLNSNRRVRGALNFD 593
Y G SP K L DIN+ R R + A+ D
Sbjct: 1004 YKFNG------SPSKSLKDINNMIRQGEQRTKKRAITID 1036
>gi|147905768|ref|NP_001084880.1| retinoblastoma-like 1 (p107) [Xenopus laevis]
gi|47123211|gb|AAH70856.1| MGC84607 protein [Xenopus laevis]
Length = 998
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 40/196 (20%)
Query: 42 KMVVTPVSTAMTTAKWLRTIICPLPSKPSADLQGA------NLMDNI------------- 82
+ V+TPVS+A L++++ L + PS L N ++N+
Sbjct: 335 QTVITPVSSATQCVSRLQSMVAGLRNAPSEQLIEVFKSCVRNPIENVLNIVRDIGLRFVD 394
Query: 83 ---------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRC 122
+A R A L +KVLET+ E++ LH K+LT+L FH+
Sbjct: 395 HYTQSTEDQPGSHIDFAVNRWKLAEILYFKVLETIVVQESRRLHGKDLTALLEQDIFHQS 454
Query: 123 MLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLE 182
++AC E+VL + + F +E + ++AF KVI+ FIR E+ L R++ +HLN++E
Sbjct: 455 LIACCLEIVLFAYSSPKT-FPWTIEVLKLSAFYFYKVIEVFIRSEDGLSRDMVKHLNTIE 513
Query: 183 ERLLESMVWEKGSSMY 198
E++LES W S ++
Sbjct: 514 EQILESRAWTSDSVLW 529
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 117/285 (41%), Gaps = 68/285 (23%)
Query: 362 PGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSL 421
P +P + + F K+ LA+VR+ + +L +S +R ++ L +L T L
Sbjct: 706 PTSARKPKKTGSLALFFRKMYHLASVRLRDLCLKLDVSNDLRRKIWTLF-VYSLVHCTDL 764
Query: 422 FFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----------- 470
+ H+DQ++LC Y +AKIS+ F +I+ Y QPQ V+RSV
Sbjct: 765 MKDRHLDQLLLCAVYIMAKISKEERLFHDIMKCYRNQPQANSHVYRSVLLKRLPQASEDE 824
Query: 471 --------------------------------DHVDIITFYNKIFAPTVKPLLVELGPVG 498
+ D+ITFYN ++ V+ ++
Sbjct: 825 TSTSQDVEMTASNSNDSHPTPSGFTGSPCGQAERGDLITFYNNVYVERVRLFALKFS--- 881
Query: 499 TAMKTNRDSEVNHNNDA---SVFPALPD--MSPKKVSATHSVYVSPLRTSEMDALISHSS 553
S +H DA S FP++ +SP++VS HS+YVSP + S L H++
Sbjct: 882 -------SSTQDHLVDAPPLSPFPSIKQQAISPRRVSQQHSIYVSPHKNS--GNLTPHTA 932
Query: 554 KSYYACVGESTHAYSPFKDLTDINHRLNSNRRVRGALNFDDVDVD 598
Y SP K L DIN L +R R + D D +
Sbjct: 933 LLY-------KFNGSPSKSLQDINSMLKQEQRSRKRIIAIDSDTE 970
>gi|344281690|ref|XP_003412611.1| PREDICTED: retinoblastoma-associated protein-like [Loxodonta
africana]
Length = 1003
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 124/276 (44%), Gaps = 55/276 (19%)
Query: 23 ASPVKTITSPLSPHHSSTSKMV-----VTPVSTAMTTAKWLRTIICPLPSKPSADL---- 73
A P+ + + +P S+ + V TPV M T + L TI+ +PS +L
Sbjct: 420 ADPIDSFETQRTPRKSNPDEEVNMIPPQTPVRAVMNTIQQLMTILNSASDQPSENLISYF 479
Query: 74 ------------------------QGANLMDNIWAE---QRRLEALKLNYKVLETMCTAE 106
+ A + AE QR ++L Y+V+E+M +E
Sbjct: 480 NNCTVNPKESILKRVRDIGCIFKEKFARAVGQGCAEIGSQRYKLGVRLYYRVMESMLKSE 539
Query: 107 AQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT---------MLFLAVLERIGIT 152
+ L +N + L FH+ +LAC+ E+V+AT+ T + F +L + +
Sbjct: 540 EERLSIQNFSKLLNDNIFHKSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLNLK 599
Query: 153 AFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR----PAL 208
AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W S +++ + +R PA
Sbjct: 600 AFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQSRDREGPAD 659
Query: 209 SAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPT 244
E ++ Q++ + + + S L P PT
Sbjct: 660 HLEPACAL-NLPLQNNHTAADMYLSPLRSPKKKGPT 694
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 347 KSKPLP----PPLYPTRSNPG-GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQ 401
K P P PP ++ P +P T +++ + K+ +LA +R+N + RL
Sbjct: 690 KKGPTPRVNSPPSAEAQAAPAFQTQKPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHP 749
Query: 402 IRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQC 461
E + + TL L + H+DQI++C YG+ K+ ++L FK I+ Y P
Sbjct: 750 ELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHA 809
Query: 462 KPQVFRSVF----DHVDIITFYNKIFAPTVK 488
+ F+ V ++ II FYN +F +K
Sbjct: 810 VQETFKRVLIREEEYDSIIVFYNSVFMQKLK 840
>gi|47211930|emb|CAF96000.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1311
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 41/215 (19%)
Query: 30 TSPLSPH-HSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSADLQ------GANLMDNI 82
++PL+ H + + + TP+S+A + L++++ L + PS +L N + I
Sbjct: 700 STPLTGHAYLKENNTLGTPISSATQSVSRLQSMVAGLRTAPSENLMQIFRSCSRNPSEAI 759
Query: 83 WAEQRRL------------------------EALKLN----YKVLETMCTAEAQVLHAKN 114
A RRL + LKL YKVLE + E + LH K+
Sbjct: 760 TARVRRLGQTFKEHYSLDSEDTPASHIDFAEKRLKLAEILYYKVLENVMVQETKRLHGKD 819
Query: 115 LT-----SLFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEES 169
++ +FH ++AC E+VL ++ + F ++ + +F KVI+ FIR EE
Sbjct: 820 MSILLEQDIFHCSLMACCLEVVLFSYSS-QRTFPWIINVFKLASFYFFKVIEVFIRSEEG 878
Query: 170 LPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
L R++ +HLN +EE++LES W + S+++ +L A
Sbjct: 879 LSRDMVKHLNQIEEQVLESQAWSRDSALWGALQAA 913
>gi|344279617|ref|XP_003411584.1| PREDICTED: retinoblastoma-like protein 1 [Loxodonta africana]
Length = 1067
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 119/272 (43%), Gaps = 67/272 (24%)
Query: 361 NPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTS 420
+P G +P + + + K+ LA+VR+ + +L +S ++R ++ C + TL +
Sbjct: 774 HPTGISKPKKTGSLALFYRKVYHLASVRLRDLCLKLDISNELRRKIWT-CFEFTLVHCSD 832
Query: 421 LFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---------- 470
L + H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 833 LMKDRHLDQLLLCSFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKTVPREVVT 892
Query: 471 --------------------------------DHVDIITFYNKIFAPTVKPLLVELGPVG 498
+ D+I FYN I+ VK
Sbjct: 893 YSENINGDIEMTDCDLEDATQTTDCSSGPVREERGDLIKFYNTIYVGRVKSF-------- 944
Query: 499 TAMKTNRDSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSS 553
A+K + ++ H +A S FP + SP+++S HS+YVSP + A ++ S
Sbjct: 945 -ALKYDLSNQA-HMMEAPPLSPFPHIKQQPGSPRRISQQHSIYVSPHKNG---AGLTPRS 999
Query: 554 KSYYACVGESTHAYSPFKDLTDINHRLNSNRR 585
Y G SP K L DIN+ + +
Sbjct: 1000 ALLYKFNG------SPSKSLKDINNMIRQGEQ 1025
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 87/163 (53%), Gaps = 9/163 (5%)
Query: 47 PVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAE 106
P+ K + C ++P+ D G+++ +A R A L YK+LET+ E
Sbjct: 423 PLENITKIVKGIGESFCQHYTQPADDQPGSHI---DFAVNRLKLAEILYYKMLETVMVQE 479
Query: 107 AQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQ 161
+ LH +++ L FH ++AC E+VL + + F ++E + + F KVI+
Sbjct: 480 TRRLHGMDMSVLLEQDIFHHSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIE 538
Query: 162 SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
IR EE L R++ +HLNS+EE++LES+ W S+++ +L +
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQAS 581
>gi|1144388|gb|AAB18279.1| p107, partial [Mus musculus]
Length = 1063
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 40/197 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------- 82
V TPV++A + L++I+ L S PS L N M NI
Sbjct: 383 VTTPVASATQSVSRLQSIVAGLKSAPSEQLLNIFESCMRNPMGNIIKTVKGIGETFCQHY 442
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R L YK+LET+ E + LH +++ L FH+ ++
Sbjct: 443 TQSTDKQPGSHIDFAVNRLKLXEILYYKILETIMVQETRRLHGMDMSVLLEQDIFHKSLM 502
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F ++E + + F KVI+ IR EE L R++ +HLNS+EE+
Sbjct: 503 ACCLEIVLFAYSS-PRTFPWIIEVLDLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQ 561
Query: 185 LLESMVWEKGSSMYNSL 201
+LES+ W S+++ +L
Sbjct: 562 ILESLAWTNNSALWEAL 578
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 63/265 (23%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G +P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 777 GVSKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 835
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------- 470
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 836 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPGGVVVYNG 895
Query: 471 -------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNR 505
+ D+I FYN ++ VK A+K +
Sbjct: 896 DCEMTDGDIEDATKTPNCSSEPVKEERGDLIKFYNTVYVGRVKSF---------ALKYDL 946
Query: 506 DSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACV 560
++ +H DA S FP + SP+++S HS+YVSP + ++ S Y
Sbjct: 947 SNQ-DHIMDAPPLSPFPHIKQQPGSPRRISQQHSLYVSPHKNG---CGLTPRSALLYKFN 1002
Query: 561 GESTHAYSPFKDLTDINHRLNSNRR 585
G SP K L DIN+ + +
Sbjct: 1003 G------SPSKSLKDINNMIRQGEQ 1021
>gi|426391643|ref|XP_004062178.1| PREDICTED: retinoblastoma-like protein 1 [Gorilla gorilla gorilla]
Length = 962
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 91/161 (56%), Gaps = 11/161 (6%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMC 103
V+TPV++A + L++I+ L + PS L NI+ R+ ++ K L T+
Sbjct: 383 VITPVASATQSVSRLQSIVAGLKNAPSDQLI------NIFEFLYRMAKTEIAEKYL-TVV 435
Query: 104 TAEAQVLHAKNLTSLFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSF 163
QVL +++ FHR ++AC E+VL + + F ++E + + F KVI+
Sbjct: 436 FLFPQVLLEQDI---FHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVV 491
Query: 164 IRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
IR EE L R++ +HLNS+EE++LES+ W S+++ +L V+
Sbjct: 492 IRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQVS 532
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 67/260 (25%)
Query: 373 GINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIIL 432
G + + K+ LA+VR+ + +L +S ++R ++ C + TL L + H+DQ++L
Sbjct: 681 GACLYYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMKDRHLDQLLL 739
Query: 433 CCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---------------------- 470
C FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 740 CAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVAYNKNINDDFEMI 799
Query: 471 --------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVN 510
+ D+I FYN I+ VK A+K + ++ +
Sbjct: 800 DCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSF---------ALKYDLSNQ-D 849
Query: 511 HNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTH 565
H DA S FP + SP+++S HS+Y+SP + + ++ S Y G
Sbjct: 850 HMMDAPPLSPFPHIKQQPGSPRRISQQHSIYISPHKNG---SGLTPRSALLYKFNG---- 902
Query: 566 AYSPFKDLTDINHRLNSNRR 585
SP K L DIN+ + +
Sbjct: 903 --SPSKSLKDINNMIRQGEQ 920
>gi|291388626|ref|XP_002710823.1| PREDICTED: retinoblastoma-like protein 1 [Oryctolagus cuniculus]
Length = 1068
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 26/221 (11%)
Query: 6 FGGAVNITGAK--RKFDSLASPVKTITSPLSPHHSSTSKM---------------VVTPV 48
F + +TG + R+ +++ +PV + T +S S + + + PV
Sbjct: 365 FAPSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAASEQLTNIFESCIRNPV 424
Query: 49 STAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQ 108
K + C ++ S D Q + +D +A R A L YK+LET+ E +
Sbjct: 425 ENITKIVKGIGETFCQHYTQ-STDEQPGSHID--FAINRLKLAEILYYKILETVMVQETR 481
Query: 109 VLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSF 163
LH +++ L FHR ++AC E+VL + + F ++E + + F KVI+
Sbjct: 482 RLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVV 540
Query: 164 IRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
IR EE L R++ +HLNS+EE++LES+ W S ++ +L +
Sbjct: 541 IRSEEGLSRDMVKHLNSIEEQILESLAWSHSSVLWEALQAS 581
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 119/280 (42%), Gaps = 69/280 (24%)
Query: 363 GGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLF 422
G +P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 777 AGMSKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLM 835
Query: 423 FNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------ 470
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 836 RDRHLDQLLLCAFYVMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVTYH 895
Query: 471 ------------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTA 500
+ D+I FYN ++ VK ++
Sbjct: 896 KNINGDFEMADGDLEDATKTPDCSSGPVKEERGDLIKFYNTVYVGRVKSFALKYD----- 950
Query: 501 MKTNRDSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKS 555
+N+D H D S FP + SP++VS HS+YVSP + + ++ S
Sbjct: 951 -LSNKD----HMMDVPPLSPFPHIKQQPGSPRRVSQQHSIYVSPHKNG---SGLTPRSAL 1002
Query: 556 YYACVGESTHAYSPFKDLTDINH--RLNSNRRVRGALNFD 593
Y G SP K L DIN+ R R + A+ D
Sbjct: 1003 LYRFNG------SPSKSLKDINNMIRQGEQRTKKRAIAID 1036
>gi|260834765|ref|XP_002612380.1| hypothetical protein BRAFLDRAFT_218889 [Branchiostoma floridae]
gi|229297757|gb|EEN68389.1| hypothetical protein BRAFLDRAFT_218889 [Branchiostoma floridae]
Length = 1053
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 119/281 (42%), Gaps = 65/281 (23%)
Query: 363 GGGGEPCAETG-INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSL 421
G P G + + F K+ LA+VR+ + E+L++ ++R ++ C TL + L
Sbjct: 751 AGEQHPHKRIGSLGLFFRKVYHLASVRLRDLCEKLEVGDELRRKMWT-CFTHTLKEHVEL 809
Query: 422 FFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQV---------------- 465
+ H+DQI++C Y +AK++Q + +F++I+ Y QPQ V
Sbjct: 810 MRDRHLDQIVMCSIYVMAKVTQHDKSFQDIMKCYRTQPQASSHVSLTFLNRYLNHKHSID 869
Query: 466 ---FRSVF---------------------------DHVDIITFYNKIFAPTVKPLLVELG 495
F ++ + D+I FYN IF +K + +
Sbjct: 870 NQHFSRMYLQQELCISSAPPTPTRLAGLGATVDGDERGDLIQFYNTIFVTKLKSYVRKFS 929
Query: 496 PVGTAMKTNRDSEVNHNNDASV-FPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSK 554
P G ++ + N + + P SP++VS H +Y+SP + L S+
Sbjct: 930 PTG-----DQKVGLEQKNLSPIPLPRTHMQSPRRVSVRHPIYISPHKNGR--PLTPTSAM 982
Query: 555 SYYACVGESTHAYSPFKDLTDINHRLNSNRR--VRGALNFD 593
Y C G+ SP K+L DI + S + + ALN+D
Sbjct: 983 LY--CFGK-----SPAKNLQDITSMIKSGEQPTKKRALNYD 1016
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 94/168 (55%), Gaps = 10/168 (5%)
Query: 47 PVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAE 106
P + + K + C ++PS D G+++ +A++R A L YKVLE + E
Sbjct: 413 PQESISSRIKEMGEQFCTSYTQPSEDHPGSHIE---FAQKRLRLAETLYYKVLENVMLQE 469
Query: 107 AQVLHAK-NLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVI 160
+ L K +L SL FHR ++AC E+++ ++ + F +++ G++ ++ KVI
Sbjct: 470 KKRLKGKLDLVSLMEQDVFHRSLMACCLEIIIFSYNS-QRTFPWIIDVFGLSPYHFYKVI 528
Query: 161 QSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPAL 208
+ IR E+ L R++ +HLN +EE++LES+ W+ S ++ ++ + A+
Sbjct: 529 EVLIRAEDGLSRDVVKHLNFIEEQILESLAWKSESPLWEAMKMNENAV 576
>gi|432104196|gb|ELK31018.1| Retinoblastoma-associated protein [Myotis davidii]
Length = 886
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 50/233 (21%)
Query: 23 ASPVKTITSPLSPHHSSTSK-----MVVTPVSTAMTTAKWLRTIICPLPSKPSADLQG-- 75
A P+ + +P S+ + + TPV T M T + L I+ +PS +L
Sbjct: 303 ADPIDSFEMQRTPRKSNNDEELNVILPQTPVRTVMNTIQQLMMILNSASDQPSENLISYF 362
Query: 76 ----ANLMDNIW-------------------------AEQRRLEALKLNYKVLETMCTAE 106
N M++I QR ++L Y+V+E+M +E
Sbjct: 363 NNCTVNPMESILKRVQDIGYIFKEKFAKAVGQGCIEIGSQRYKLGVRLYYRVMESMLKSE 422
Query: 107 AQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT---------MLFLAVLERIGIT 152
+ L +N + L FH +LAC+ E+V+AT+ T + F +L + +
Sbjct: 423 EERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNVLNLK 482
Query: 153 AFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 205
AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W S +++ + A+
Sbjct: 483 AFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAK 535
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 598 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 657
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 658 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSV 717
Query: 483 FAPTVK 488
F +K
Sbjct: 718 FMQRLK 723
>gi|390462299|ref|XP_002747257.2| PREDICTED: retinoblastoma-like protein 1 [Callithrix jacchus]
Length = 1131
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 122/282 (43%), Gaps = 69/282 (24%)
Query: 361 NPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTS 420
+P G +P + + + K+ LA+VR+ + +L +S ++R ++ C + TL
Sbjct: 838 HPTGISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPD 896
Query: 421 LFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---------- 470
L + H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 897 LMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVA 956
Query: 471 --------------------------------DHVDIITFYNKIFAPTVKPLLVELGPVG 498
+ D+I FYN I+ VK
Sbjct: 957 YNKNINDDFEMIDCDLEDAAKTPDCSNGSVKEERGDLIKFYNTIYVGRVKSF-------- 1008
Query: 499 TAMKTNRDSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSS 553
A+K + ++ +H D S FP + SP+++S HS+YVSP + + ++ S
Sbjct: 1009 -ALKYDLSNQ-DHVMDVPPLSPFPHIKQQPGSPRRISQQHSIYVSPHKNG---SGLTPRS 1063
Query: 554 KSYYACVGESTHAYSPFKDLTDINH--RLNSNRRVRGALNFD 593
Y G SP K L DIN+ R R + A+ D
Sbjct: 1064 ALLYKFNG------SPSKSLKDINNMIRQGEQRTKKRAIAID 1099
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 28/199 (14%)
Query: 6 FGGAVNITGAK--RKFDSLASPVKTITSPLSPHHSSTSKM---------------VVTPV 48
F + +TG + R+ ++L +PV + T +S S + + V P+
Sbjct: 364 FAPSTPLTGRRYLREKEALITPVASATQSVSRLQSIVAGLKNAPSEQLLNIFESCVRNPM 423
Query: 49 STAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQ 108
M K + C ++ S D Q + +D +A R A L YK+LET+ E +
Sbjct: 424 ENIMKILKGIGETFCQHYTQ-STDEQPGSHID--FAVNRLKLAEILYYKILETIMVQETR 480
Query: 109 VLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSF 163
LH +++ L FHR ++AC E+VL + + F ++E + + F KV Q
Sbjct: 481 RLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEILNLQPFYFYKVSQ-I 538
Query: 164 IRHEESLPRELRRHLNSLE 182
++ EE + E++ LN ++
Sbjct: 539 VQAEEGIS-EVKVQLNEIK 556
>gi|46095209|gb|AAS80140.1| retinoblastoma tumor suppressor [Fundulus heteroclitus]
Length = 913
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 81/147 (55%), Gaps = 17/147 (11%)
Query: 82 IWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHK 136
++ +QR A++L YKV+E M +E + L +N + L FH +LACS E+V+AT++
Sbjct: 426 VYGQQRFGLAVRLYYKVMEAMLKSEEKRLSVQNFSKLLNDATFHTSLLACSLEVVMATYE 485
Query: 137 T------------VTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
+ F +L + ++AF+ KVI+SFI+ E +L +++ +HL + E
Sbjct: 486 ESSFKNGGGDQTGTNLCFPWILNVLNLSAFDFYKVIESFIKAEPTLSKDIIKHLETCENL 545
Query: 185 LLESMVWEKGSSMYNSLTVARPALSAE 211
++E + W GS ++ L + +AE
Sbjct: 546 IMERIAWRTGSPLFELLQQEHASAAAE 572
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 106/255 (41%), Gaps = 22/255 (8%)
Query: 342 GLNNLKSK-PLPPPLYPTRSNPGGGGEPC------AETGINICFCKINKLAAVRINAMVE 394
GL L S P PP PT S PC +++ + K+ +LA R+ +
Sbjct: 601 GLRVLPSDSPATPPQQPTASQSSAQA-PCQAPRQPKSNSLSLFYKKLYRLAYTRLKTLCS 659
Query: 395 RLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYN 454
L S E + + TL L + H+DQ+++ Y + K+ ++L FK I+
Sbjct: 660 YLLSSHPELEPIIWTLFQYTLQHEYELMRDRHLDQLMMSAMYAICKVKSVDLRFKSIVSA 719
Query: 455 YGKQPQCKPQVFRSVF---DHVD-IITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVN 510
Y + F++V H D II FYN++F +K +++ +
Sbjct: 720 YKNMANTNQETFKNVLITEGHYDSIIVFYNQVFMQKLKTNILQH---ASTKPPPPSPIPQ 776
Query: 511 HNNDASVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPF 570
FP SP +V +++VY+SPL+ S M I +GES + F
Sbjct: 777 MPRSPYKFPN----SPLRVPGSNNVYISPLKNSRMSPGIMTPRSRMLVSIGESFGLSNRF 832
Query: 571 KDLTDINHRLNSNRR 585
+ IN +NS+ R
Sbjct: 833 Q---KINQMVNSSER 844
>gi|449280345|gb|EMC87672.1| Retinoblastoma-associated protein, partial [Columba livia]
Length = 837
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 73/130 (56%), Gaps = 16/130 (12%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATH----- 135
QR ++L Y+V+E+M +E + L +N + L FH +LACS E+V+AT+
Sbjct: 362 QRYKLGVRLYYRVMESMLKSEEERLSVQNFSKLLNDNIFHTSLLACSIEVVMATYGRNAS 421
Query: 136 ------KTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESM 189
+ F +L + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+
Sbjct: 422 QSDGTSAETDVSFPWILNVFDLKAFDFYKVIESFIKAEPNLTREMIKHLERCEHRIMESL 481
Query: 190 VWEKGSSMYN 199
W+ GS +++
Sbjct: 482 AWQSGSPVFD 491
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 14/202 (6%)
Query: 348 SKPLPPPLYPTRSNPGGGGE---PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRE 404
S P P + PG + P T +++ + K+ LA +R++ + RL E
Sbjct: 538 SAPPPSATSAPDAQPGVNPQTQRPQKSTSLSLFYKKVYLLAYLRLHTLFFRLLSDHPDLE 597
Query: 405 SVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQ 464
+ + TL L + H+DQI++CC YG+ K+ ++L FK I+ Y + P +
Sbjct: 598 LLIWTLFQHTLQNEYELMRDRHLDQIMMCCMYGICKVKNVDLRFKTIVSAYKELPNTNQE 657
Query: 465 VFRSVF----DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPA 520
F+ V + II FYN F +K +++ +NR ++ P
Sbjct: 658 TFKRVLIREGQYDSIIVFYNLEFMQKLKTNILQYA-------SNRPPTLSPIPHIPRSPY 710
Query: 521 LPDMSPKKVSATHSVYVSPLRT 542
SP++V A +++Y+SPL++
Sbjct: 711 QFSNSPRRVPAGNNIYISPLKS 732
>gi|395521038|ref|XP_003764628.1| PREDICTED: retinoblastoma-associated protein [Sarcophilus harrisii]
Length = 919
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 74/128 (57%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 434 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHTSLLACAVEVVMATYGRNTY 493
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E SL RE+ +HL E R++ES+ W
Sbjct: 494 QNHDSGTDLSFPWILNVLDLKAFDFYKVIESFIKAEASLTREMIKHLERCEHRIMESLAW 553
Query: 192 EKGSSMYN 199
+ S +++
Sbjct: 554 QSDSPLFD 561
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 24/196 (12%)
Query: 357 PTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLN 416
P ++ +P T +++ + K+ +LA +R+N + RL E + + TL
Sbjct: 621 PQTTSASQTQKPPKSTSLSLFYKKVYRLAYLRLNTLCSRLLSDHPELEHIIWTLFQHTLQ 680
Query: 417 QRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DH 472
L + H+DQI++C YG+ K+ ++L FK I+ Y + F+ V +
Sbjct: 681 NEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLTHAIQETFKRVLIREGQY 740
Query: 473 VDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSAT 532
II FYN +F +K +++ S P +P SP K S++
Sbjct: 741 DSIIVFYNLVFMQKLKTNILQYASTRPPT-------------LSPIPHIP-RSPYKFSSS 786
Query: 533 ------HSVYVSPLRT 542
++Y+SPL++
Sbjct: 787 PLRVPGGNIYISPLKS 802
>gi|326927239|ref|XP_003209800.1| PREDICTED: retinoblastoma-like protein 2-like [Meleagris gallopavo]
Length = 1058
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 44/214 (20%)
Query: 29 ITSPLSPH-HSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------------ 75
+T+PL+ + S VTPVS A + L T++ L + PS +L+
Sbjct: 321 MTTPLTGRRYMKESNPYVTPVSIATYSLSRLHTMLAGLKNAPSENLEQIFKACSRDPSQS 380
Query: 76 ----------------------ANLMDNIWAEQ-RRLEALKLNYKVLETMCTAEAQVLHA 112
+NL ++ ++ RR E L YKVLE++ E + L
Sbjct: 381 IASRVKEMCDIYCQSMQSEEEFSNLSKDVASKHFRRAEVLY--YKVLESVIEQERRRLGD 438
Query: 113 KNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHE 167
+L+++ FHR +LAC E+V T+K + F + E I ++ KVI+ FIR E
Sbjct: 439 ADLSAVLEQDVFHRSLLACCLEIVTFTYK-LPGSFPFITEIFDIPVYHFYKVIEVFIRAE 497
Query: 168 ESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
+ L RE+ +HLN +EE++LESM W++ S +++ +
Sbjct: 498 DGLCREVVKHLNHIEEQILESMAWKQESILWDRI 531
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 374 INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILC 433
+++ F K+ LA+VR+ + +L +S ++R+ V+ C + +L + + H+DQ+++C
Sbjct: 755 LSLFFRKVYHLASVRLRDLSVKLDISDELRKKVWT-CFEYSLMHCPEIMMDRHLDQLLMC 813
Query: 434 CFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
Y +AK+++ + +F+ I+ Y QPQ K V+RSV
Sbjct: 814 AIYVMAKVTKEDRSFQNIMRCYRTQPQAKSHVYRSVL 850
>gi|350589853|ref|XP_001926888.4| PREDICTED: retinoblastoma-associated protein [Sus scrofa]
Length = 938
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 50/233 (21%)
Query: 23 ASPVKTITSPLSPHHSSTSKMV-----VTPVSTAMTTAKWLRTIICPLPSKPSADL---- 73
A P ++ +P S+ + V TPV T M T + L I+ +PS +L
Sbjct: 354 ADPTDSLEMQRTPRKSNPDEEVNVILPQTPVRTVMNTIQQLMMILNSASDQPSENLISYF 413
Query: 74 ------------QGANLMDNIWAEQ---------------RRLEALKLNYKVLETMCTAE 106
+ + I+ EQ R ++L Y+V+E+M +E
Sbjct: 414 NNCTVNPKESILKRVKDIGYIFKEQFAKAVGQGCMEIGSQRYKLGVRLYYRVMESMLKSE 473
Query: 107 AQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT---------MLFLAVLERIGIT 152
+ L +N + L FH +LAC+ E+V+AT+ T + F +L + +
Sbjct: 474 EERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNVLNLK 533
Query: 153 AFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 205
AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W S +++ + A+
Sbjct: 534 AFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWRSDSPLFDLIKQAK 586
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 650 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 709
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 710 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSV 769
Query: 483 FAPTVK 488
F +K
Sbjct: 770 FMQRLK 775
>gi|405951748|gb|EKC19634.1| Retinoblastoma-associated protein [Crassostrea gigas]
Length = 859
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 373 GINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIIL 432
+ I K+ +L R+ + L L + I++ ++ C + + +RT L N H+DQI+L
Sbjct: 563 SLAIFLNKVCRLGYHRLEQLFSLLFLPKDIQQRIWT-CLEYCVTKRTGLLKNRHLDQIML 621
Query: 433 CCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKIFAPTVK 488
C YG+ K+ + + FK+II Y + PQ P V+R ++ II FYN++F +K
Sbjct: 622 CSVYGICKVMEREIKFKDIIRTYSELPQASPNVYRRALIEGCEYDSIIVFYNRVFMHNMK 681
Query: 489 PLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRTSEMDAL 548
+++ P + S N + V+ +++ + YVSPL+ S
Sbjct: 682 NFILQFAPTRQSPTL---SPAPRNITSPVY---------SIASRRNFYVSPLKDSPFKPP 729
Query: 549 ISHSSKSYYACVGESTHAYSPFKDLTDINHRLN 581
+S S + S YS F D++ N +L
Sbjct: 730 LSPSQMT-----PRSLQLYS-FGDISGSNEKLQ 756
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 49/218 (22%)
Query: 34 SPHHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSADL-------------------- 73
SP + +TPV A+ T + L+ I+ +PS DL
Sbjct: 273 SPRNDEPDGPPITPVRAALNTIQNLKKILFSTRDEPSPDLLVHFKNCSQNPLSSIKERLG 332
Query: 74 QGANLMDNIWAE-----------QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL---- 118
+ + N +AE QR + A +L Y+V+E+M E + L + + L
Sbjct: 333 RLETVFTNTFAEQTDRNQTAIAKQRFVLAKRLYYRVMESMLNHERERLSQTDFSKLLNID 392
Query: 119 -FHRCMLACSAELVLATHKT-------------VTMLFLAVLERIGITAFNLSKVIQSFI 164
FH +LACS E+V+ T+ F +++ G+ ++ KV++SFI
Sbjct: 393 TFHVSLLACSLEIVMMTYGASWNASFGTVCAGDSKFSFPWIIQTFGLHCYDFFKVLESFI 452
Query: 165 RHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLT 202
+ E L +E+ +HL +LE+R+LE + W S ++ +L+
Sbjct: 453 KAEPILTKEIVKHLQNLEKRILEELAWTPESPVFEALS 490
>gi|410947412|ref|XP_003980441.1| PREDICTED: retinoblastoma-associated protein [Felis catus]
Length = 921
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 50/233 (21%)
Query: 23 ASPVKTITSPLSPHHSSTSKMV-----VTPVSTAMTTAKWLRTIICPLPSKPSADL---- 73
A P + +P SS+ + V TPV T M T + L I+ +PS +L
Sbjct: 339 ADPTDSFEMQRTPRKSSSDEEVNTMLPQTPVRTVMNTIQQLMMILNSASDQPSENLISYF 398
Query: 74 ------------QGANLMDNIWAE---------------QRRLEALKLNYKVLETMCTAE 106
+ + I+ E QR ++L Y+V+E+M +E
Sbjct: 399 NNCTVNPKESILKRVKDIGCIFKEKFAKAVGQGCMEIGSQRYKLGVRLYYRVMESMLKSE 458
Query: 107 AQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT---------MLFLAVLERIGIT 152
+ L +N + L FH +LAC+ E+V+AT+ T + F +L + +
Sbjct: 459 EERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNVLNLK 518
Query: 153 AFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 205
AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W S +++ + A+
Sbjct: 519 AFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAK 571
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 633 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 692
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 693 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSV 752
Query: 483 FAPTVK 488
F +K
Sbjct: 753 FMQRLK 758
>gi|410919169|ref|XP_003973057.1| PREDICTED: retinoblastoma-like protein 1-like [Takifugu rubripes]
Length = 1033
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 106/215 (49%), Gaps = 41/215 (19%)
Query: 30 TSPLSPH-HSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSADLQ-------------- 74
++PL+ H + +K++ TP+S A + L++++ L + PS +L
Sbjct: 364 STPLTGHAYLKENKVLGTPISLATQSVSRLQSMVAGLRTAPSENLMQIFKSCSRDPTESI 423
Query: 75 -------GANLMDNI-------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKN 114
G ++ +AE+R A L YKVLE + E + LH K+
Sbjct: 424 LARVKTLGKIFKEHYALDSEDMPTSHIDFAEKRLKLAEILYYKVLENVMVQEMKRLHGKD 483
Query: 115 LT-----SLFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEES 169
++ +FH ++AC E+VL ++ + F ++ + +F KVI+ FIR EE
Sbjct: 484 MSILLEQDIFHCSLMACCLEVVLFSYSS-QRTFPWIINIFKLASFYFFKVIEVFIRSEEG 542
Query: 170 LPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
L R++ +HLN +EE++LES W S+++++L A
Sbjct: 543 LSRDMVKHLNQIEEQVLESQAWSTDSALWSALQAA 577
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 111/267 (41%), Gaps = 62/267 (23%)
Query: 355 LYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRT 414
L P + G P + + F K+ LA+VR+ + +L +S +R ++ C + T
Sbjct: 728 LDPAPPDAQAGSRPRRTGSLALFFRKVYHLASVRLRDLCWKLDISSDLRGKIWT-CFEHT 786
Query: 415 LNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---- 470
L T L H+DQ++LC Y ++KI++ F +I+ Y QPQ V+R+V
Sbjct: 787 LIHCTDLMRGRHLDQLLLCSVYIMSKITKETHFFHDIMKCYRSQPQAHSHVYRNVLLRHR 846
Query: 471 -------------------------------------DHVDIITFYNKIFAPTVKPLLVE 493
+ D+I FYN +F VK +
Sbjct: 847 ECVAEENMEVDPASVADSAEKTSQTSGDANVSQPGEEERGDLIQFYNSVFVLKVKNFALR 906
Query: 494 LGPVGTAMKTNRDSEV-NHNNDASVFPAL--PDMSPKKVSATHSVYVSPLRTSEMDALIS 550
DSEV S FP++ +SP++VS HS+YVSP + S + S
Sbjct: 907 YAV--------SDSEVWIQAPPLSPFPSVRAQPLSPRRVSQRHSLYVSPHKNSTL----S 954
Query: 551 HSSKSYYACVGESTHAYSPFKDLTDIN 577
H+ SY + SP ++LT IN
Sbjct: 955 HTVNSYSYRINS-----SPSEELTAIN 976
>gi|301767484|ref|XP_002919165.1| PREDICTED: retinoblastoma-associated protein-like [Ailuropoda
melanoleuca]
Length = 925
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 107/233 (45%), Gaps = 50/233 (21%)
Query: 23 ASPVKTITSPLSPHHSSTSKMV-----VTPVSTAMTTAKWLRTIICPLPSKPSADL---- 73
A P+ + +P S++ + V TPV T M T + L I+ +PS +L
Sbjct: 342 ADPIDSFEMQRTPRKSNSDEEVNVILPQTPVRTVMNTIQQLMMILNSASDQPSENLISYF 401
Query: 74 ------------QGANLMDNIWAE---------------QRRLEALKLNYKVLETMCTAE 106
+ + I+ E QR ++L Y+V+E+M +E
Sbjct: 402 NNCTVNPKESILKRVKDVGYIFKEKFAKAVGQGCMEIGSQRYKLGVRLYYRVMESMLKSE 461
Query: 107 AQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT---------MLFLAVLERIGIT 152
+ L +N + L FH +LAC+ E+V+AT+ T + F +L + +
Sbjct: 462 EERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRNTSQNLDTGTDLSFPWILNVLNLK 521
Query: 153 AFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 205
AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W S +++ + A+
Sbjct: 522 AFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAK 574
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 637 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 696
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 697 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSV 756
Query: 483 FAPTVK 488
F +K
Sbjct: 757 FMQRLK 762
>gi|312082219|ref|XP_003143354.1| hypothetical protein LOAG_07773 [Loa loa]
Length = 369
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 53/183 (28%)
Query: 366 GEPCAETGINICFC-KINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFN 424
GE T + F K+ LAAVR+ + ER++L ++ R+ + L + L TSL
Sbjct: 93 GESLTPTSATLLFFRKVYYLAAVRLRDLCERVRLDEKGRQRAWTLF-EHVLRTETSLMAG 151
Query: 425 CHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-------------- 470
H+DQ ++CC Y VAKI Q N++F +I+Y+Y QPQ +V+R V
Sbjct: 152 RHLDQNLMCCLYVVAKIGQQNISFHDIMYHYRHQPQAASRVYRRVMVESNSSPPIILDDG 211
Query: 471 -------------------------------------DHVDIITFYNKIFAPTVKPLLVE 493
+++D+I +YN+IF VK + +
Sbjct: 212 ASHDSVGSASDEKFRSESSVSGAVTGSGAATPEHQNVEYIDLIKYYNQIFISRVKSFVQK 271
Query: 494 LGP 496
L P
Sbjct: 272 LQP 274
>gi|126327520|ref|XP_001368799.1| PREDICTED: retinoblastoma-associated protein [Monodelphis
domestica]
Length = 928
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 74/128 (57%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLAT------ 134
QR ++L Y+V+E+M +E + L N + L FH +LAC+ E+V+AT
Sbjct: 443 QRYKLGVRLYYRVMESMLKSEEERLSIHNFSKLLNDKIFHTSLLACAVEVVMATYGRNTY 502
Query: 135 --HKTVTML-FLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
H + T L F +L + + AF+ KVI+SFI+ E SL RE+ +HL E R++ES+ W
Sbjct: 503 QSHDSGTDLSFPWILNVLDLKAFDFYKVIESFIKAEASLTREMIKHLERCEHRIMESLAW 562
Query: 192 EKGSSMYN 199
+ S +++
Sbjct: 563 QSDSPLFD 570
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 24/181 (13%)
Query: 372 TGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQII 431
T +++ + K+ +LA +R+N + RL E + + TL L + H+DQI+
Sbjct: 645 TSLSLFYKKVYRLAYLRLNTLCSRLLSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIM 704
Query: 432 LCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKIFAPTV 487
+C YG+ K+ ++L FK I+ Y + F+ V + II FYN +F +
Sbjct: 705 MCSMYGICKVKNIDLKFKIIVTAYKDLTHAIQETFKRVLIREGQYDSIIVFYNLVFMQKL 764
Query: 488 KPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSAT------HSVYVSPLR 541
K +++ +NR + S P +P SP K S++ ++Y+SPL+
Sbjct: 765 KTNILQYA-------SNRPPTL------SPIPHIP-RSPYKFSSSPLRVPGGNIYISPLK 810
Query: 542 T 542
+
Sbjct: 811 S 811
>gi|348528825|ref|XP_003451916.1| PREDICTED: retinoblastoma-like protein 1 [Oreochromis niloticus]
Length = 1064
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 117/280 (41%), Gaps = 79/280 (28%)
Query: 352 PPPLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCP 411
P + T G G P + + F K+ LA+VR+ + +L +S +R ++ C
Sbjct: 754 PTAVATTSDTQAGNGRPRRTGSLALFFRKVYHLASVRLRDLCVKLDISSDLRGKIWT-CF 812
Query: 412 KRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF- 470
+ +L T L + H+DQ++LC Y ++KI++ TF++I+ Y QPQ V+RSV
Sbjct: 813 EHSLVHCTDLMKDRHLDQLLLCSIYIISKITKETHTFQDIMKCYRSQPQANSHVYRSVLL 872
Query: 471 -------------------------------------------DHVDIITFYNKIFAPTV 487
+ D+I FYN ++ +
Sbjct: 873 RRTPREQVADENMEVDPVSGGESAEKTNQHSGDLNCSQSGGEEERGDLIQFYNTVYVLKM 932
Query: 488 KPLLVELGPVGTAMKTNRDSEVNHNNDA---SVFPAL--PDMSPKKVSATHSVYVSPLRT 542
K + R + ++ DA S FP++ +SP+++S HS+YVSP +
Sbjct: 933 KSFAL------------RYATSDNRADAPPLSPFPSVRAQPLSPRRISQRHSLYVSPHKN 980
Query: 543 SEMDALISHSSKSYYACVGESTHAY----SPFKDLTDINH 578
S C+ +++ Y SP K+L+DIN
Sbjct: 981 SA-------------GCLTPNSYTYRINSSPSKELSDINR 1007
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 84/163 (51%), Gaps = 9/163 (5%)
Query: 47 PVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAE 106
P + +T K L + S D G+++ +AE R A L YK+LE + E
Sbjct: 423 PTESILTRVKTLGQTFKGHYTNDSEDTPGSHI---DFAENRLKLAEILYYKILENVMVQE 479
Query: 107 AQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQ 161
+ L ++++ L FH ++AC E+VL + + F ++ + F KVI+
Sbjct: 480 TKRLPGRDMSVLLEQDIFHCSLMACCLEVVLFAYSS-QRTFPWIISVFKLAPFYFFKVIE 538
Query: 162 SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
FIR EE L R++ +HLNS+EE++LES W S+++ +L A
Sbjct: 539 VFIRSEEGLSRDMVKHLNSIEEQVLESRAWTADSALWRALQAA 581
>gi|89886547|gb|ABD78137.1| retinoblastoma susceptibility protein [Xiphophorus maculatus]
Length = 912
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 79/147 (53%), Gaps = 17/147 (11%)
Query: 82 IWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHK 136
++ QR ++L YKV+E M +E + L +N + L FH +LACS E+V+AT++
Sbjct: 426 VYGRQRFALGVRLYYKVMEAMLKSEEKRLSVQNFSKLLNDFTFHTSLLACSLEVVMATYE 485
Query: 137 T------------VTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
+ F +L + ++AF+ KVI+SFI+ E +L +++ +HL + E
Sbjct: 486 ESSFKNGGSDQTGTNLCFPWILNVLNLSAFDFYKVIESFIKAEPTLSKDIIKHLETCENL 545
Query: 185 LLESMVWEKGSSMYNSLTVARPALSAE 211
++E + W GS ++ L + +AE
Sbjct: 546 IMERIAWRTGSPLFELLKQEHASAAAE 572
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 104/251 (41%), Gaps = 33/251 (13%)
Query: 350 PLPPPLYPTRSNPGGGGEPC------AETGINICFCKINKLAAVRINAMVERLQLSQQIR 403
P PP PT S PC +++ + K+ +LA R+ + L S
Sbjct: 610 PATPPQQPTASQSTSQA-PCQAPRQPKSNSLSLFYKKLYRLAYTRLKTLCSYLLSSHPEL 668
Query: 404 ESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKP 463
E + + TL L + H+DQ+++ Y + K+ ++L FK I+ Y
Sbjct: 669 EPIIWTLFQYTLQHEYELMRDRHLDQLMMSAMYAICKVKSVDLRFKSIVSAYKNMTNTNQ 728
Query: 464 QVFRSVF---DHVD-IITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFP 519
+ F++V H D II FYN++F +K +++ + S P
Sbjct: 729 ETFKNVLIIEGHYDSIIVFYNQVFMQKLKTNILQHASIRPP-------------PLSPIP 775
Query: 520 ALPDM------SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDL 573
+P SP +V ++++Y+SPLR+S M I +GES + F+
Sbjct: 776 QIPRSPYKLPNSPLRVPGSNNIYISPLRSSRMSPGIMTPRSRMLVSIGESFGLGNRFQ-- 833
Query: 574 TDINHRLNSNR 584
IN +NS R
Sbjct: 834 -KINQMVNSER 843
>gi|338715461|ref|XP_001490611.3| PREDICTED: retinoblastoma-associated protein [Equus caballus]
Length = 835
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 50/233 (21%)
Query: 23 ASPVKTITSPLSPHHSSTSKMV-----VTPVSTAMTTAKWLRTIICPLPSKPSADL---- 73
A P + +P S++ + V TPV T M T + L I+ +PS +L
Sbjct: 254 ADPADSFEMQRTPRKSNSDEEVNVILPQTPVRTVMNTIQQLMMILNSASDQPSENLISYF 313
Query: 74 ------------QGANLMDNIWAE---------------QRRLEALKLNYKVLETMCTAE 106
+ + I+ E QR ++L Y+V+E+M +E
Sbjct: 314 NYCTVNPKESILKRVTDIGYIFKEKFAKAVGQGCMEIGSQRYKLGVRLYYRVMESMLKSE 373
Query: 107 AQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT---------MLFLAVLERIGIT 152
+ L +N + L FH +LAC+ E+V+AT+ T + F +L + +
Sbjct: 374 EERLSIQNFSKLLNDNVFHMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNVLNLK 433
Query: 153 AFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 205
AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W S +++ + A+
Sbjct: 434 AFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAK 486
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL + E + + TL L + H
Sbjct: 549 KPVKSTSLSLFYKKVYRLAYLRLNTLCTRLLSDHRELEHIIWTLFQHTLQNEYELMRDRH 608
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 609 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSV 668
Query: 483 FAPTVK 488
F +K
Sbjct: 669 FMQRLK 674
>gi|441613864|ref|XP_003270122.2| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-associated protein
isoform 1 [Nomascus leucogenys]
Length = 928
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 45/199 (22%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADL----------------QGANLMDNIWAE---- 85
TPV T MTT + L I+ +PS +L + + I+ E
Sbjct: 373 TPVRTVMTTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDIGYIFKEKFAK 432
Query: 86 -----------QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E
Sbjct: 433 AVGQGCVEIGSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNVFHMSLLACALE 492
Query: 130 LVLATHKTVT---------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNS 180
+V+AT+ T + F +L + + AF+ KVI+SFI+ E +L RE+ +HL
Sbjct: 493 IVMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGTLTREMIKHLER 552
Query: 181 LEERLLESMVWEKGSSMYN 199
E R++ES+ W S +++
Sbjct: 553 CEHRIMESLAWLSDSPLFD 571
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + ERL E + + TL L + H
Sbjct: 640 KPLKSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRH 699
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 700 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSV 759
Query: 483 FAPTVK 488
F +K
Sbjct: 760 FMQRLK 765
>gi|399571554|gb|AFP48333.1| retinoblastoma protein [Sus scrofa]
Length = 939
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 50/227 (22%)
Query: 23 ASPVKTITSPLSPHHSSTSKMV-----VTPVSTAMTTAKWLRTIICPLPSKPSADL---- 73
A P ++ +P S+ + V TPV T M T + L I+ +PS +L
Sbjct: 355 ADPTDSLEMQRTPRKSNPDEEVNVILPQTPVRTVMNTIQQLMMILNSASDQPSENLISYF 414
Query: 74 ------------QGANLMDNIWAEQ---------------RRLEALKLNYKVLETMCTAE 106
+ + I+ EQ R ++L Y+V+E+M +E
Sbjct: 415 NNCTVNPKESILKRVKDIGYIFKEQFAKAVGQGCMEIGSQRYKLGVRLYYRVMESMLKSE 474
Query: 107 AQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT---------MLFLAVLERIGIT 152
+ L +N + L FH +LAC+ E+V+AT+ T + F +L + +
Sbjct: 475 EERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNVLNLK 534
Query: 153 AFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 199
AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W S +++
Sbjct: 535 AFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWRSDSPLFD 581
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 651 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 710
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 711 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSV 770
Query: 483 FAPTVK 488
F +K
Sbjct: 771 FMQRLK 776
>gi|390457676|ref|XP_002742717.2| PREDICTED: retinoblastoma-associated protein [Callithrix jacchus]
Length = 1729
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 14/130 (10%)
Query: 84 AEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTV 138
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+
Sbjct: 1243 GSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRS 1302
Query: 139 T---------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESM 189
T + F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+
Sbjct: 1303 TSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESL 1362
Query: 190 VWEKGSSMYN 199
W S +++
Sbjct: 1363 AWHSDSPLFD 1372
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + ERL E + + TL L + H
Sbjct: 1441 KPLKSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRH 1500
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 1501 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSV 1560
Query: 483 FAPTVK 488
F +K
Sbjct: 1561 FMQRLK 1566
>gi|7677391|gb|AAF67147.1| retinoblastoma 1 protein [Canis lupus familiaris]
Length = 518
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 76/136 (55%), Gaps = 14/136 (10%)
Query: 84 AEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTV 138
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+
Sbjct: 59 GSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDDIFHMSLLACALEVVMATYSRS 118
Query: 139 T---------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESM 189
T + F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+
Sbjct: 119 TSQNLDTGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESL 178
Query: 190 VWEKGSSMYNSLTVAR 205
W S +++ + A+
Sbjct: 179 AWLSDSPLFDLIKQAK 194
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K +LA +R+N + RL E + + TL L + H
Sbjct: 257 KPLKSTSLSLFYKKEYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 316
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 317 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSV 376
Query: 483 FAPTVK 488
F +K
Sbjct: 377 FMQRLK 382
>gi|345788752|ref|XP_534118.3| PREDICTED: retinoblastoma-associated protein [Canis lupus
familiaris]
Length = 816
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 76/134 (56%), Gaps = 14/134 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 332 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDDIFHMSLLACALEVVMATYSRSTS 391
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 392 QNLDTGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAW 451
Query: 192 EKGSSMYNSLTVAR 205
S +++ + A+
Sbjct: 452 LSDSPLFDLIKQAK 465
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 528 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 587
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 588 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSV 647
Query: 483 FAPTVK 488
F +K
Sbjct: 648 FMQRLK 653
>gi|74138763|dbj|BAE27194.1| unnamed protein product [Mus musculus]
Length = 748
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 45/199 (22%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNIWAE-------------- 85
TPV T M T + L I+ +PS +L N +NI
Sbjct: 194 TPVRTVMNTIQQLMVILNSASDQPSENLISYFNNCTVNPKENILKRVKDVGHIFKEKFAN 253
Query: 86 -----------QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E
Sbjct: 254 AVGQGCVDIGVQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALE 313
Query: 130 LVLATHKTVTMLFLA---------VLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNS 180
+V+AT+ T+ L +L + + AF+ KVI+SFI+ E +L RE+ +HL
Sbjct: 314 VVMATYSRSTLQHLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLER 373
Query: 181 LEERLLESMVWEKGSSMYN 199
E R++ES+ W S +++
Sbjct: 374 CEHRIMESLAWLSDSPLFD 392
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T + + + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 460 KPLKSTSLALFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 519
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVFDHVD----IITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V + II FYN +
Sbjct: 520 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLTREEEFDSIIVFYNSV 579
Query: 483 FAPTVK 488
F +K
Sbjct: 580 FMQRLK 585
>gi|291408942|ref|XP_002720769.1| PREDICTED: retinoblastoma 1 [Oryctolagus cuniculus]
Length = 927
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 45/199 (22%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNIW---------------- 83
TPV T M T + L I+ +PS +L N +NI
Sbjct: 372 TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKENILKRVKDIGCIFKEKFAK 431
Query: 84 ---------AEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E
Sbjct: 432 AVGQGCVDIGSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALE 491
Query: 130 LVLATHKTVT---------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNS 180
+V+AT+ T + F +L + + AF+ KVI+SFI+ E +L RE+ +HL
Sbjct: 492 VVMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLER 551
Query: 181 LEERLLESMVWEKGSSMYN 199
E R++ES+ W S +++
Sbjct: 552 CEHRIMESLAWLSDSPLFD 570
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 639 KPVKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 698
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 699 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSV 758
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSAT------HSVY 536
F +K +++ S P +P SP K S++ ++Y
Sbjct: 759 FMQRLKTNILQYASTRPPT-------------LSPIPHIP-RSPYKFSSSPLRIPGGNIY 804
Query: 537 VSPLRT 542
+SPL++
Sbjct: 805 ISPLKS 810
>gi|288551674|gb|ADC53307.1| retinoblastoma protein [Zalophus californianus]
Length = 416
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 76/134 (56%), Gaps = 14/134 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 51 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 110
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 111 QNLDTGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAW 170
Query: 192 EKGSSMYNSLTVAR 205
S +++ + A+
Sbjct: 171 LSDSPLFDLIKQAK 184
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 247 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMKDRH 306
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 307 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSV 366
Query: 483 FAPTVK 488
F +K
Sbjct: 367 FMQRLK 372
>gi|417405307|gb|JAA49369.1| Putative rb retinoblastoma tumor suppressor-related protein
[Desmodus rotundus]
Length = 932
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 76/134 (56%), Gaps = 14/134 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 448 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 507
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 508 QNLDTGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAW 567
Query: 192 EKGSSMYNSLTVAR 205
S +++ + A+
Sbjct: 568 LSDSPLFDLIKQAK 581
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 644 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 703
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y + P + F+ V ++ II FYN +
Sbjct: 704 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKELPHAVQETFKRVLIREEEYDSIIVFYNSV 763
Query: 483 FAPTVK 488
F +K
Sbjct: 764 FMQRLK 769
>gi|200453|gb|AAA39964.1| pp105 Rb protein [Mus musculus]
Length = 921
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 45/199 (22%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNIWAE-------------- 85
TPV T M T + L I+ +PS +L N +NI
Sbjct: 367 TPVRTVMNTIQQLMVILNSASDQPSENLISYFNNCTVNPKENILKRVKDVGHIFKEKFAN 426
Query: 86 -----------QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E
Sbjct: 427 AVGQGCVDIGVQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALE 486
Query: 130 LVLATHKTVTMLFLA---------VLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNS 180
+V+AT+ T+ L +L + + AF+ KVI+SFI+ E +L RE+ +HL
Sbjct: 487 VVMATYSRSTLQHLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLER 546
Query: 181 LEERLLESMVWEKGSSMYN 199
E R++ES+ W S +++
Sbjct: 547 CEHRIMESLAWLSDSPLFD 565
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 24/186 (12%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T + + + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 633 KPLKSTSLALFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 692
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V + II FYN +
Sbjct: 693 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLIREEEFDSIIVFYNSV 752
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSAT------HSVY 536
F +K +++ S P +P SP K S++ ++Y
Sbjct: 753 FMQRLKTNILQYASTRPPT-------------LSPIPHIP-RSPYKFSSSPLRIPGGNIY 798
Query: 537 VSPLRT 542
+SPL++
Sbjct: 799 ISPLKS 804
>gi|324506107|gb|ADY42615.1| Retinoblastoma-associated protein [Ascaris suum]
Length = 533
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 372 TGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQII 431
+ + F K+ LAAVR+ + ER+ L ++ R V+ L + L TSL H+DQ +
Sbjct: 396 SATTLFFRKVYYLAAVRLQDLCERVHLDEKGRHRVWTLF-EHVLRTETSLMAGRHLDQNL 454
Query: 432 LCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-DH 472
+CC Y VAKIS+ +++F I+Y+Y QPQ +V+R V DH
Sbjct: 455 MCCLYVVAKISKQDVSFHNIMYHYRHQPQASSRVYRQVLIDH 496
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 70/129 (54%), Gaps = 11/129 (8%)
Query: 87 RRLEALKLNYKVLETMCTAEAQVL---HAKNLTSLFHR-----CMLACSAELVLATHKTV 138
RR A KL Y++LE + AE + + + +L+ + ++ + C+ EL+L T+++
Sbjct: 200 RRENADKLFYRLLEKIIIAERERVSPNESPDLSVVLNKEELIASIYVCALELILFTYES- 258
Query: 139 TMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY 198
F LE I + + K I+ IR E L RE+ +HLN +EER+LE + W S ++
Sbjct: 259 EREFPWSLEVIRLAPVHFYKAIELVIRAEPELSREMVKHLNKIEERVLEELAWSVDSPLW 318
Query: 199 NSLTVARPA 207
T+AR A
Sbjct: 319 Q--TLARRA 325
>gi|74187799|dbj|BAE24548.1| unnamed protein product [Mus musculus]
Length = 921
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 45/199 (22%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNIWAE-------------- 85
TPV T M T + L I+ +PS +L N +NI
Sbjct: 367 TPVRTVMNTIQQLMVILNSASDQPSENLISYFNNCTVNPKENILKRVKDVGHIFKEKFAN 426
Query: 86 -----------QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E
Sbjct: 427 AVGQGCVDIGVQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALE 486
Query: 130 LVLATHKTVTMLFLA---------VLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNS 180
+V+AT+ T+ L +L + + AF+ KVI+SFI+ E +L RE+ +HL
Sbjct: 487 VVMATYSRSTLQHLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLER 546
Query: 181 LEERLLESMVWEKGSSMYN 199
E R++ES+ W S +++
Sbjct: 547 CEHRIMESLAWLSDSPLFD 565
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 24/186 (12%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T + + + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 633 KPLKSTSLALFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 692
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V + II FYN +
Sbjct: 693 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLIREEEFDSIIVFYNSV 752
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSAT------HSVY 536
F +K +++ S P +P SP K S++ ++Y
Sbjct: 753 FMQRLKTNILQYASTRPPT-------------LSPIPHIP-RSPYKFSSSPLRIPGGNIY 798
Query: 537 VSPLRT 542
+SPL++
Sbjct: 799 ISPLKS 804
>gi|393904812|gb|EJD73805.1| retinoblastoma-associated protein A domain-containing protein [Loa
loa]
Length = 827
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 53/183 (28%)
Query: 366 GEPCAETGINICFC-KINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFN 424
GE T + F K+ LAAVR+ + ER++L ++ R+ + L + L TSL
Sbjct: 551 GESLTPTSATLLFFRKVYYLAAVRLRDLCERVRLDEKGRQRAWTLF-EHVLRTETSLMAG 609
Query: 425 CHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-------------- 470
H+DQ ++CC Y VAKI Q N++F +I+Y+Y QPQ +V+R V
Sbjct: 610 RHLDQNLMCCLYVVAKIGQQNISFHDIMYHYRHQPQAASRVYRRVMVESNSSPPIILDDG 669
Query: 471 -------------------------------------DHVDIITFYNKIFAPTVKPLLVE 493
+++D+I +YN+IF VK + +
Sbjct: 670 ASHDSVGSASDEKFRSESSVSGAVTGSGAATPEHQNVEYIDLIKYYNQIFISRVKSFVQK 729
Query: 494 LGP 496
L P
Sbjct: 730 LQP 732
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 119 FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHL 178
F + + CS +LVL T+++V F LE + + A + KVI+ IR + SL RE+ +HL
Sbjct: 405 FLKALYVCSLQLVLFTYESVRE-FPWSLETMHLPAIHFYKVIELIIRADSSLSREMVKHL 463
Query: 179 NSLEERLLESMVWEKGSSMYNSL 201
N +EER+LE W S ++ SL
Sbjct: 464 NKVEERVLEEFAWSLDSPLWPSL 486
>gi|188528630|ref|NP_033055.2| retinoblastoma-associated protein [Mus musculus]
gi|341941878|sp|P13405.2|RB_MOUSE RecName: Full=Retinoblastoma-associated protein; AltName: Full=pRb;
Short=Rb; AltName: Full=pp105
gi|66396541|gb|AAH96525.1| Retinoblastoma 1 [Mus musculus]
gi|89357181|gb|ABD72475.1| retinoblastoma susceptibility protein [Mus musculus]
Length = 921
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 45/199 (22%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNIWAE-------------- 85
TPV T M T + L I+ +PS +L N +NI
Sbjct: 367 TPVRTVMNTIQQLMVILNSASDQPSENLISYFNNCTVNPKENILKRVKDVGHIFKEKFAN 426
Query: 86 -----------QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E
Sbjct: 427 AVGQGCVDIGVQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALE 486
Query: 130 LVLATHKTVTMLFLA---------VLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNS 180
+V+AT+ T+ L +L + + AF+ KVI+SFI+ E +L RE+ +HL
Sbjct: 487 VVMATYSRSTLQHLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLER 546
Query: 181 LEERLLESMVWEKGSSMYN 199
E R++ES+ W S +++
Sbjct: 547 CEHRIMESLAWLSDSPLFD 565
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 24/186 (12%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T + + + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 633 KPLKSTSLALFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 692
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V + II FYN +
Sbjct: 693 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLIREEEFDSIIVFYNSV 752
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSAT------HSVY 536
F +K +++ S P +P SP K S++ ++Y
Sbjct: 753 FMQRLKTNILQYASTRPPT-------------LSPIPHIP-RSPYKFSSSPLRIPGGNIY 798
Query: 537 VSPLRT 542
+SPL++
Sbjct: 799 ISPLKS 804
>gi|403303288|ref|XP_003942268.1| PREDICTED: retinoblastoma-associated protein [Saimiri boliviensis
boliviensis]
Length = 926
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 74/128 (57%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLT-----SLFHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + S+FH +LAC+ E+V+AT+ T
Sbjct: 442 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDSIFHMSLLACALEVVMATYSRSTS 501
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 502 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGTLTREMIKHLERCEHRIMESLAW 561
Query: 192 EKGSSMYN 199
S +++
Sbjct: 562 LSDSPLFD 569
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + ERL E + + TL L + H
Sbjct: 638 KPLKSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRH 697
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 698 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSV 757
Query: 483 FAPTVK 488
F +K
Sbjct: 758 FMQRLK 763
>gi|148703912|gb|EDL35859.1| retinoblastoma 1 [Mus musculus]
Length = 881
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 45/199 (22%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNIWAE-------------- 85
TPV T M T + L I+ +PS +L N +NI
Sbjct: 327 TPVRTVMNTIQQLMVILNSASDQPSENLISYFNNCTVNPKENILKRVKDVGHIFKEKFAN 386
Query: 86 -----------QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E
Sbjct: 387 AVGQGCVDIGVQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALE 446
Query: 130 LVLATHKTVTMLFLA---------VLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNS 180
+V+AT+ T+ L +L + + AF+ KVI+SFI+ E +L RE+ +HL
Sbjct: 447 VVMATYSRSTLQHLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLER 506
Query: 181 LEERLLESMVWEKGSSMYN 199
E R++ES+ W S +++
Sbjct: 507 CEHRIMESLAWLSDSPLFD 525
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 24/186 (12%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T + + + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 593 KPLKSTSLALFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 652
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V + II FYN +
Sbjct: 653 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLIREEEFDSIIVFYNSV 712
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSAT------HSVY 536
F +K +++ S P +P SP K S++ ++Y
Sbjct: 713 FMQRLKTNILQYASTRPPT-------------LSPIPHIP-RSPYKFSSSPLRIPGGNIY 758
Query: 537 VSPLRT 542
+SPL++
Sbjct: 759 ISPLKS 764
>gi|390351820|ref|XP_790323.3| PREDICTED: retinoblastoma-associated protein-like
[Strongylocentrotus purpuratus]
Length = 797
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 103/223 (46%), Gaps = 49/223 (21%)
Query: 32 PLSPHHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSADL----QGANLMDNIWAEQR 87
P SP + S + +TPV A+TT + L++++ PS L +G ++ EQR
Sbjct: 316 PPSPDSTVKSPVFLTPVRRAVTTVQALKSLLTGARDTPSNVLCSYFEGCSINPQSAVEQR 375
Query: 88 --------------------------RLE-ALKLNYKVLETMCTAEAQVLHAKNLTSL-- 118
R + L+ Y+++E+M E + L + ++L
Sbjct: 376 VEKLKELFVGHYVGEVGVQASELACTRFKLGLRFYYRIMESMLIKEEKRLSTSDFSTLLN 435
Query: 119 ---FHRCMLACSAELVLATHK-------------TVTMLFLAVLERIGITAFNLSKVIQS 162
FHR +LAC+ E+V+ T + +LF +L+ + +FN KVI+S
Sbjct: 436 NDAFHRSLLACALEVVMVTFGYTASPINSGMSALSSKLLFPWILDVFDLHSFNFIKVIES 495
Query: 163 FIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 205
F+++E L E R+HL +E +++E + W S ++++L R
Sbjct: 496 FVKNEPRLTEEARKHLQGIETQIVECLAWSVNSPLFDALKRVR 538
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 353 PPLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPK 412
P P+ GGG E +N+ F K +LA R++ M L LS+ + ++ C +
Sbjct: 624 PSPRPSYGGVGGGQEKLGSVTLNMFFNKALQLAYHRLHTMCNLLDLSKDLNRLMW-TCVE 682
Query: 413 RTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-- 470
+ + L H+DQ+I+CC YG+ K+ FKEI+ Y P Q +++V+
Sbjct: 683 HCITNKPWLLQGRHLDQVIMCCMYGICKVRDCERKFKEIVNMYRGLPHALSQTYKNVYMG 742
Query: 471 ---DHVDIITFYNKIF 483
+ II FYN+IF
Sbjct: 743 EGKESASIIVFYNQIF 758
>gi|354487932|ref|XP_003506125.1| PREDICTED: retinoblastoma-associated protein-like [Cricetulus
griseus]
Length = 946
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 45/199 (22%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNIWAE-------------- 85
TPV T M T + L I+ +PS +L N +NI
Sbjct: 392 TPVRTVMNTIQQLMVILNSASDQPSENLISYFNNCTVNPKENILKRVKDVGHIFKEKFAN 451
Query: 86 -----------QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E
Sbjct: 452 AVGQGCVDIGVQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALE 511
Query: 130 LVLATHKTVT---------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNS 180
+V+AT+ T + F +L + + AF+ KVI+SFI+ E +L RE+ +HL
Sbjct: 512 VVMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKVETNLTREMIKHLER 571
Query: 181 LEERLLESMVWEKGSSMYN 199
E R++ES+ W S +++
Sbjct: 572 CEHRIMESLAWLSDSPLFD 590
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 24/186 (12%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 658 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMKDRH 717
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V + II FYN +
Sbjct: 718 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLIREEEFDSIIVFYNSV 777
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSAT------HSVY 536
F +K +++ S P +P SP K S++ ++Y
Sbjct: 778 FMQRLKTNILQYASTRPPT-------------LSPIPHIP-RSPYKFSSSPLRIPGGNIY 823
Query: 537 VSPLRT 542
+SPL++
Sbjct: 824 ISPLKS 829
>gi|24754020|gb|AAN64133.1| retinoblastoma 1 (including osteosarcoma) [Homo sapiens]
Length = 928
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 74/128 (57%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ + T
Sbjct: 444 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSSNTS 503
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 504 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAW 563
Query: 192 EKGSSMYN 199
S +++
Sbjct: 564 LSDSPLFD 571
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + ERL E + + TL L + H
Sbjct: 640 KPLKSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRH 699
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 700 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSV 759
Query: 483 FAPTVK 488
F +K
Sbjct: 760 FMQRLK 765
>gi|426236719|ref|XP_004012315.1| PREDICTED: retinoblastoma-associated protein [Ovis aries]
Length = 960
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 50/233 (21%)
Query: 23 ASPVKTITSPLSPHHSSTSKMV-----VTPVSTAMTTAKWLRTIICPLPSKPSADL---- 73
A P + +P S+ + V TPV T M T + L I+ +PS +L
Sbjct: 377 ADPTDSFEMQRTPRKSNPDEEVNMILPQTPVRTVMNTIQQLMMILNSASDQPSENLISYF 436
Query: 74 ------------QGANLMDNIWAE---------------QRRLEALKLNYKVLETMCTAE 106
+ + +I+ E QR ++L Y+V+E+M +E
Sbjct: 437 NNCTVNPKESILKRVKDIGDIFKEKFAKAVGQGCMEIGSQRYKLGVRLYYRVMESMLKSE 496
Query: 107 AQVLHAKNLTSL-----FHRCMLACSAELVLATHKT---------VTMLFLAVLERIGIT 152
+ L +N + L FH +LAC+ E+V+AT+ + F +L +
Sbjct: 497 EERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSMSQSLDTGTDLSFPWILNVFNLK 556
Query: 153 AFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 205
AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W S +++ + A+
Sbjct: 557 AFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAK 609
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 672 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 731
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 732 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSV 791
Query: 483 FAPTVK 488
F +K
Sbjct: 792 FMQRLK 797
>gi|325186164|emb|CCA20667.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 1102
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 6/122 (4%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTM 140
+++ A L Y VL++M AE L N T L F M ACS E++L H +T+
Sbjct: 603 KKKEYAKTLFYHVLQSMLIAEEARLQTSNFTWLLRNNVFLSAMFACSLEVILKAHSLITL 662
Query: 141 LFLAVLERIGITAFNLSKVIQSFIRH-EESLPRELRRHLNSLEERLLESMVWEKGSSMYN 199
F +LE + + F+ +++SF++H + LP L+RHL +E+ ++ SM WE S +Y
Sbjct: 663 SFPFLLEHLEVNVFDFGLLLESFVKHVPKRLPCALKRHLRDIEQMIMASMAWESSSGLYR 722
Query: 200 SL 201
+L
Sbjct: 723 AL 724
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 63/155 (40%), Gaps = 34/155 (21%)
Query: 373 GINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIIL 432
G+++ F K+ LAA RI + L L +I V+ K L L + H+D IIL
Sbjct: 784 GLHVFFRKVFALAASRIYRLGTMLGLEPKILNQVWTAV-KECLTYHHELVKDRHVDHIIL 842
Query: 433 CCFYGVAKISQLN--LTFKEIIYNYGK---------QPQCKPQVFRSVFDHV-------- 473
C YGV K++ + +TF+ +I Y K +P + H+
Sbjct: 843 CSLYGVCKVNLIKPEVTFRRVIEVYKKLQTPHWAIHRPGTTGSTASDIIRHIRLVDASTS 902
Query: 474 --------------DIITFYNKIFAPTVKPLLVEL 494
DII FYNK F +K L++
Sbjct: 903 SKSSTAPRESVPRGDIIKFYNKCFIAAMKVFLLQF 937
>gi|351705118|gb|EHB08037.1| Retinoblastoma-associated protein, partial [Heterocephalus glaber]
Length = 883
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 399 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNVFHMSLLACALEVVMATYSRSTS 458
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 459 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAW 518
Query: 192 EKGSSMYN 199
S +++
Sbjct: 519 LSDSPLFD 526
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 595 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMKDRH 654
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 655 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSV 714
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSAT------HSVY 536
F +K +++ S P +P SP K S++ ++Y
Sbjct: 715 FMQRLKTNILQYASTRPPT-------------LSPIPHIP-RSPYKFSSSPLRIPGGNIY 760
Query: 537 VSPLRT 542
+SPL++
Sbjct: 761 ISPLKS 766
>gi|327261143|ref|XP_003215391.1| PREDICTED: retinoblastoma-associated protein-like [Anolis
carolinensis]
Length = 901
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 49/202 (24%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADL----------------QGANLMDNIWAE---- 85
TPV TAM T + L I+ KPS +L + + I+ E
Sbjct: 346 TPVRTAMNTIQQLVMILNSASDKPSDNLISYFNNCTVNPTHDIVERVENLGRIFKEKFAE 405
Query: 86 -----------QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
QR ++L Y+V+E++ +E + L N + L FH +LAC+ E
Sbjct: 406 AVGQRCAEIGSQRYRLGVRLYYRVMESILKSEEKRLSIHNFSKLLNNNTFHASLLACALE 465
Query: 130 LVLATHKTVT-------------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRR 176
+V+AT+ T T + F ++ + + AF+L KVI+SFI+ E SL RE+ +
Sbjct: 466 VVVATYGTSTNASQGDAMNMETNLSFPWIINILDLKAFDLYKVIESFIKAEPSLTREMIK 525
Query: 177 HLNSLEERLLESMVWEKGSSMY 198
HL E +++ES+ W+ S ++
Sbjct: 526 HLECCEHQIMESLAWQSDSPLF 547
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 90/178 (50%), Gaps = 15/178 (8%)
Query: 372 TGINICFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLCPKRTLNQRTSLFFNCHIDQ 429
T +++ + K+ LA R++ + RL LS+ +++ ++ L TL L + H+DQ
Sbjct: 620 TSLSLFYKKVYWLAYKRLSNLCSRL-LSEHPELKHLIWTLF-HHTLQNEYELMKDRHLDQ 677
Query: 430 IILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKIFAP 485
I++C YG+ K+ ++L FK I+ Y + + F+ V + II FYN +F
Sbjct: 678 IMMCSMYGICKVKNIDLRFKTIVTAYKELTNANQETFKCVLIREGQYDSIIVFYNLVFMQ 737
Query: 486 TVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRTS 543
+K +++ ++R ++ P SP +VSA +++Y+SPL++S
Sbjct: 738 RLKTNILQYA-------SSRPPTLSPIPHIPKSPYKLSNSPLRVSAGNNIYISPLKSS 788
>gi|402901984|ref|XP_003913911.1| PREDICTED: retinoblastoma-associated protein [Papio anubis]
Length = 923
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 14/130 (10%)
Query: 84 AEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTV 138
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+
Sbjct: 437 GSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRS 496
Query: 139 T---------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESM 189
T + F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+
Sbjct: 497 TSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESL 556
Query: 190 VWEKGSSMYN 199
W S +++
Sbjct: 557 AWLSDSPLFD 566
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + ERL E + + TL L + H
Sbjct: 635 KPLKSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRH 694
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 695 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSV 754
Query: 483 FAPTVK 488
F +K
Sbjct: 755 FMQRLK 760
>gi|440898457|gb|ELR49952.1| Retinoblastoma-associated protein, partial [Bos grunniens mutus]
Length = 883
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 102/233 (43%), Gaps = 50/233 (21%)
Query: 23 ASPVKTITSPLSPHHSSTSKMV-----VTPVSTAMTTAKWLRTIICPLPSKPSADLQG-- 75
A P + +P S+ + V TPV T M T + L I+ +PS +L
Sbjct: 300 ADPTDSFEMQRTPRKSNPDEEVNMILPQTPVRTVMNTIQQLMMILNSASDQPSENLISYF 359
Query: 76 ----ANLMDNIW-------------------------AEQRRLEALKLNYKVLETMCTAE 106
N D+I QR ++L Y+V+E+M +E
Sbjct: 360 NNCTVNPKDSILKRVKDIGDVFKEKFAKAVGQGCMEIGSQRYKLGVRLYYRVMESMLKSE 419
Query: 107 AQVLHAKNLTSL-----FHRCMLACSAELVLATHKT---------VTMLFLAVLERIGIT 152
+ L +N + L FH +LAC+ E+V+AT+ + F +L +
Sbjct: 420 EERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSMSQSLDTGTDLSFPWILNVFNLK 479
Query: 153 AFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 205
AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W S +++ + A+
Sbjct: 480 AFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAK 532
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 595 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 654
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 655 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSV 714
Query: 483 FAPTVK 488
F +K
Sbjct: 715 FMQRLK 720
>gi|116004031|ref|NP_001070375.1| retinoblastoma-associated protein [Bos taurus]
gi|115304733|gb|AAI23389.1| Retinoblastoma 1 [Bos taurus]
Length = 928
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 102/233 (43%), Gaps = 50/233 (21%)
Query: 23 ASPVKTITSPLSPHHSSTSKMV-----VTPVSTAMTTAKWLRTIICPLPSKPSADLQG-- 75
A P + +P S+ + V TPV T M T + L I+ +PS +L
Sbjct: 345 ADPTDSFEMQRTPRKSNPDEEVNMILPQTPVRTVMNTIQQLMMILNSASDQPSENLISYF 404
Query: 76 ----ANLMDNIW-------------------------AEQRRLEALKLNYKVLETMCTAE 106
N D+I QR ++L Y+V+E+M +E
Sbjct: 405 NNCTVNPKDSILKRVKDIGDVFKEKFAKAVGQGCMEIGSQRYKLGVRLYYRVMESMLKSE 464
Query: 107 AQVLHAKNLTSL-----FHRCMLACSAELVLATHKT---------VTMLFLAVLERIGIT 152
+ L +N + L FH +LAC+ E+V+AT+ + F +L +
Sbjct: 465 EERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSMSQSLDTGTDLSFPWILNVFNLK 524
Query: 153 AFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 205
AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W S +++ + A+
Sbjct: 525 AFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAK 577
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + R E + + TL L + H
Sbjct: 640 KPLKSTSLSLFYKKVYRLAYLRLNTLCARFLSDHPELEHIIWTLFQHTLQNEYELMRDRH 699
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 700 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSV 759
Query: 483 FAPTVK 488
F +K
Sbjct: 760 FMQRLK 765
>gi|296481832|tpg|DAA23947.1| TPA: retinoblastoma 1 [Bos taurus]
Length = 928
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 102/233 (43%), Gaps = 50/233 (21%)
Query: 23 ASPVKTITSPLSPHHSSTSKMV-----VTPVSTAMTTAKWLRTIICPLPSKPSADLQG-- 75
A P + +P S+ + V TPV T M T + L I+ +PS +L
Sbjct: 345 ADPTDSFEMQRTPRKSNPDEEVNMILPQTPVRTVMNTIQQLMMILNSASDQPSENLISYF 404
Query: 76 ----ANLMDNIW-------------------------AEQRRLEALKLNYKVLETMCTAE 106
N D+I QR ++L Y+V+E+M +E
Sbjct: 405 NNCTVNPKDSILKRVKDIGDVFKEKFAKAVGQGCMEIGSQRYKLGVRLYYRVMESMLKSE 464
Query: 107 AQVLHAKNLTSL-----FHRCMLACSAELVLATHKT---------VTMLFLAVLERIGIT 152
+ L +N + L FH +LAC+ E+V+AT+ + F +L +
Sbjct: 465 EERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSMSQSLDTGTDLSFPWILNVFNLK 524
Query: 153 AFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 205
AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W S +++ + A+
Sbjct: 525 AFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAK 577
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 640 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 699
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 700 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSV 759
Query: 483 FAPTVK 488
F +K
Sbjct: 760 FMQRLK 765
>gi|190959|gb|AAA69807.1| retinoblastoma susceptibility protein [Homo sapiens]
Length = 928
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 444 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 503
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 504 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAW 563
Query: 192 EKGSSMYN 199
S +++
Sbjct: 564 LSDSPLFD 571
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + ERL E + + TL L + H
Sbjct: 640 KPLKSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRH 699
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 700 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSV 759
Query: 483 FAPTVK 488
F +K
Sbjct: 760 FMQRLK 765
>gi|395848164|ref|XP_003796729.1| PREDICTED: retinoblastoma-associated protein [Otolemur garnettii]
Length = 927
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 443 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 502
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 503 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAW 562
Query: 192 EKGSSMYN 199
S +++
Sbjct: 563 LSDSPLFD 570
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 639 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSEHPELEHIIWTLFQHTLQNEYELMRDRH 698
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 699 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLIREEEYDSIIVFYNSV 758
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSAT------HSVY 536
F +K +++ S P +P SP K S++ ++Y
Sbjct: 759 FMQRLKTNILQYASTRPPT-------------LSPIPHIP-RSPYKFSSSPLRIPGGNIY 804
Query: 537 VSPLRT 542
+SPL++
Sbjct: 805 ISPLKS 810
>gi|62087156|dbj|BAD92025.1| Retinoblastoma-associated protein variant [Homo sapiens]
Length = 960
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 476 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 535
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 536 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAW 595
Query: 192 EKGSSMYN 199
S +++
Sbjct: 596 LSDSPLFD 603
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + ERL E + + TL L + H
Sbjct: 672 KPLKSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRH 731
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 732 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSV 791
Query: 483 FAPTVK 488
F +K
Sbjct: 792 FMQRLK 797
>gi|380798509|gb|AFE71130.1| retinoblastoma-associated protein, partial [Macaca mulatta]
gi|380798511|gb|AFE71131.1| retinoblastoma-associated protein, partial [Macaca mulatta]
Length = 914
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 430 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 489
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 490 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAW 549
Query: 192 EKGSSMYN 199
S +++
Sbjct: 550 LSDSPLFD 557
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + ERL E + + TL L + H
Sbjct: 626 KPLKSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRH 685
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 686 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSV 745
Query: 483 FAPTVK 488
F +K
Sbjct: 746 FMQRLK 751
>gi|386782129|ref|NP_001247976.1| retinoblastoma-associated protein [Macaca mulatta]
gi|383410451|gb|AFH28439.1| retinoblastoma-associated protein [Macaca mulatta]
gi|383410453|gb|AFH28440.1| retinoblastoma-associated protein [Macaca mulatta]
gi|387540698|gb|AFJ70976.1| retinoblastoma-associated protein [Macaca mulatta]
Length = 928
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 444 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 503
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 504 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAW 563
Query: 192 EKGSSMYN 199
S +++
Sbjct: 564 LSDSPLFD 571
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + ERL E + + TL L + H
Sbjct: 640 KPLKSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRH 699
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 700 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSV 759
Query: 483 FAPTVK 488
F +K
Sbjct: 760 FMQRLK 765
>gi|108773787|ref|NP_000312.2| retinoblastoma-associated protein [Homo sapiens]
gi|397480396|ref|XP_003811470.1| PREDICTED: retinoblastoma-associated protein [Pan paniscus]
gi|132164|sp|P06400.2|RB_HUMAN RecName: Full=Retinoblastoma-associated protein; AltName:
Full=p105-Rb; AltName: Full=pRb; Short=Rb; AltName:
Full=pp110
gi|190946|gb|AAA69806.1| retinoblastoma-associated protein [Homo sapiens]
gi|190963|gb|AAA69808.1| retinoblastoma suceptibility protein [Homo sapiens]
gi|292421|gb|AAA53483.1| retinoblastoma susceptibility protein [Homo sapiens]
gi|521212|gb|AAA53484.1| retinoblastoma susceptibility protein [Homo sapiens]
gi|793995|gb|AAB59465.1| retinoblastoma suspectibility protein [Homo sapiens]
gi|24660140|gb|AAH39060.1| Retinoblastoma 1 [Homo sapiens]
gi|26252120|gb|AAH40540.1| Retinoblastoma 1 [Homo sapiens]
gi|119629198|gb|EAX08793.1| retinoblastoma 1 (including osteosarcoma), isoform CRA_a [Homo
sapiens]
gi|119629199|gb|EAX08794.1| retinoblastoma 1 (including osteosarcoma), isoform CRA_a [Homo
sapiens]
gi|123981322|gb|ABM82490.1| retinoblastoma 1 (including osteosarcoma) [synthetic construct]
gi|123996153|gb|ABM85678.1| retinoblastoma 1 (including osteosarcoma) [synthetic construct]
gi|158255952|dbj|BAF83947.1| unnamed protein product [Homo sapiens]
Length = 928
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 444 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 503
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 504 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAW 563
Query: 192 EKGSSMYN 199
S +++
Sbjct: 564 LSDSPLFD 571
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + ERL E + + TL L + H
Sbjct: 640 KPLKSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRH 699
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 700 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSV 759
Query: 483 FAPTVK 488
F +K
Sbjct: 760 FMQRLK 765
>gi|355754692|gb|EHH58593.1| pRb, partial [Macaca fascicularis]
Length = 727
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 243 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 302
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 303 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAW 362
Query: 192 EKGSSMYN 199
S +++
Sbjct: 363 LSDSPLFD 370
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + ERL E + + TL L + H
Sbjct: 439 KPLKSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRH 498
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 499 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSV 558
Query: 483 FAPTVK 488
F +K
Sbjct: 559 FMQRLK 564
>gi|332841285|ref|XP_509777.3| PREDICTED: retinoblastoma-associated protein [Pan troglodytes]
gi|410214624|gb|JAA04531.1| retinoblastoma 1 [Pan troglodytes]
gi|410264018|gb|JAA19975.1| retinoblastoma 1 [Pan troglodytes]
gi|410307218|gb|JAA32209.1| retinoblastoma 1 [Pan troglodytes]
Length = 928
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 444 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 503
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 504 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAW 563
Query: 192 EKGSSMYN 199
S +++
Sbjct: 564 LSDSPLFD 571
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + ERL E + + TL L + H
Sbjct: 640 KPLKSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRH 699
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 700 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSV 759
Query: 483 FAPTVK 488
F +K
Sbjct: 760 FMQRLK 765
>gi|168275724|dbj|BAG10582.1| retinoblastoma-associated protein [synthetic construct]
Length = 928
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 444 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 503
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 504 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAW 563
Query: 192 EKGSSMYN 199
S +++
Sbjct: 564 LSDSPLFD 571
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + ERL E + + TL L + H
Sbjct: 640 KPLKSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRH 699
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 700 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSV 759
Query: 483 FAPTVK 488
F +K
Sbjct: 760 FMQRLK 765
>gi|194387624|dbj|BAG61225.1| unnamed protein product [Homo sapiens]
Length = 816
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 332 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 391
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 392 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAW 451
Query: 192 EKGSSMYN 199
S +++
Sbjct: 452 LSDSPLFD 459
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + ERL E + + TL L + H
Sbjct: 528 KPLKSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRH 587
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 588 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSV 647
Query: 483 FAPTVK 488
F +K
Sbjct: 648 FMQRLK 653
>gi|74215550|dbj|BAE21400.1| unnamed protein product [Mus musculus]
Length = 549
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTM 140
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T+
Sbjct: 66 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTL 125
Query: 141 LFLA---------VLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
L +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 126 QHLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLERCEHRIMESLAW 185
Query: 192 EKGSSMYN 199
S +++
Sbjct: 186 LSDSPLFD 193
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 28/188 (14%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T + + + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 261 KPLKSTSLALFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 320
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV------FDHVDIITFYN 480
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V FD II FYN
Sbjct: 321 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLIREEEFD--SIIVFYN 378
Query: 481 KIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSAT------HS 534
+F +K +++ S P +P SP K S++ +
Sbjct: 379 SVFMQRLKTNILQYASTRPPT-------------LSPIPHIP-RSPYKFSSSPLRIPGGN 424
Query: 535 VYVSPLRT 542
+Y+SPL++
Sbjct: 425 IYISPLKS 432
>gi|508202|gb|AAA19644.1| Rb [Gallus gallus]
Length = 919
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 92/201 (45%), Gaps = 47/201 (23%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------WAE 85
TPV AM T + L I+ KPS L N D+I +AE
Sbjct: 362 TPVRAAMNTIQQLMMILNSATDKPSDTLIAYFNNCTVNPEDSILKRVECLGHIFKKKFAE 421
Query: 86 -----------QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
QR ++L Y+V+E+M +E + L N + L FH +LAC+ E
Sbjct: 422 AVGQGCAEIGSQRYQLGVRLYYRVMESMLKSEEERLSVHNFSKLLNDNIFHTSLLACALE 481
Query: 130 LVLATHKTVT-----------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHL 178
+V+AT+ + F +L + AF+ KVI+SFI+ E SL R++ +HL
Sbjct: 482 IVMATYGRTASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVEPSLTRDMIKHL 541
Query: 179 NSLEERLLESMVWEKGSSMYN 199
E R++ES+ W+ S +++
Sbjct: 542 ERCEHRIMESLAWQSDSPLFD 562
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R++ + RL E + + TL + L + H
Sbjct: 631 KPQKSTSLSLFYKKVFRLAYLRLHTLFFRLLSEHPDLEPLIWTLFQHTLQNESELMRDRH 690
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y + P + F+ V + II FYN +
Sbjct: 691 LDQIMMCSMYGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLIREEQYDSIIVFYNLV 750
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRT 542
F +K +++ +NR ++ P SP++ +A +++Y+SPL++
Sbjct: 751 FMQKLKTNILQYA-------SNRPPTLSPIPHIPRSPYQFSNSPRR-AAGNNIYISPLKS 802
>gi|13604258|gb|AAK32151.1| retinoblastoma protein 1 [Pan troglodytes]
Length = 882
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 398 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 457
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 458 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAW 517
Query: 192 EKGSSMYN 199
S +++
Sbjct: 518 LSDSPLFD 525
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + ERL E + + TL L + H
Sbjct: 594 KPLKSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRH 653
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 654 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSV 713
Query: 483 FAPTVK 488
F +K
Sbjct: 714 FMQRLK 719
>gi|45383327|ref|NP_989750.1| retinoblastoma-associated protein [Gallus gallus]
gi|82136242|sp|Q90600.1|RB_CHICK RecName: Full=Retinoblastoma-associated protein; AltName:
Full=p104; AltName: Full=pRb; Short=Rb
gi|459445|emb|CAA51019.1| p104 chicken Rb [Gallus gallus]
Length = 921
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 92/201 (45%), Gaps = 47/201 (23%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------WAE 85
TPV AM T + L I+ KPS L N D+I +AE
Sbjct: 363 TPVRAAMNTIQQLMMILNSATDKPSDTLIAYFNNCTVNPEDSILKRVESLGHIFKKKFAE 422
Query: 86 -----------QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
QR ++L Y+V+E+M +E + L N + L FH +LAC+ E
Sbjct: 423 AVGQGCAEIGSQRYQLGVRLYYRVMESMLKSEEERLSVHNFSKLLNDNIFHTSLLACALE 482
Query: 130 LVLATHKTVT-----------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHL 178
+V+AT+ + F +L + AF+ KVI+SFI+ E SL R++ +HL
Sbjct: 483 IVMATYGRTASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVEPSLTRDMIKHL 542
Query: 179 NSLEERLLESMVWEKGSSMYN 199
E R++ES+ W+ S +++
Sbjct: 543 ERCEHRIMESLAWQSDSPLFD 563
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 89/180 (49%), Gaps = 11/180 (6%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R++ + RL E + + TL + L + H
Sbjct: 632 KPQKSTSLSLFYKKVFRLAYLRLHTLFFRLLSEHPDLEPLIWTLFQHTLQNESELMRDRH 691
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y + P + F+ V + II FYN +
Sbjct: 692 LDQIMMCSMYGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLIREEQYDSIIVFYNLV 751
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRT 542
F +K +++ +NR ++ P SP++V A +++Y+SPL++
Sbjct: 752 FMQKLKTNILQYA-------SNRPPTLSPIPHIPRSPYQFSNSPRRVPAGNNIYISPLKS 804
>gi|444732064|gb|ELW72387.1| Retinoblastoma-associated protein, partial [Tupaia chinensis]
Length = 754
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 73/128 (57%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 270 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYNRTTS 329
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L R++ +HL E R++ES+ W
Sbjct: 330 QNIDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANLTRDMIKHLERCEHRIMESLAW 389
Query: 192 EKGSSMYN 199
S +++
Sbjct: 390 LSDSPLFD 397
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 466 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 525
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 526 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSV 585
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSAT------HSVY 536
F +K +++ S P +P SP K S++ ++Y
Sbjct: 586 FMQRLKTNILQYASTRPPT-------------LSPIPHIP-RSPYKFSSSPLRIPGGNIY 631
Query: 537 VSPLRT 542
+SPL++
Sbjct: 632 ISPLKS 637
>gi|449472780|ref|XP_002190620.2| PREDICTED: retinoblastoma-like protein 2 [Taeniopygia guttata]
Length = 1200
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 40/224 (17%)
Query: 16 KRKFDSLASPVKTITSPLSPHHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSADLQG 75
++ FD S ++T T + S VTPVS A + L T++ L + PS +L+
Sbjct: 447 QQHFDRSKS-LRTTTPLTGRKYIKESNPYVTPVSIATYSLSRLHTMLAGLKNAPSENLEQ 505
Query: 76 -------------ANL---MDNIWAEQRRLE-----------------ALKLNYKVLETM 102
AN M +++ + + E A L YKVLE++
Sbjct: 506 ILRSCSRDPSQSIANRVKEMHDVYCQSTQSEGEFSNFSKDVASKHFRRAEMLYYKVLESV 565
Query: 103 CTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLS 157
E + L +L+++ FHR +LAC E++ T+ F V E I ++
Sbjct: 566 IEQEKKRLGDTDLSAILEQDVFHRSLLACCLEIITFTYNPPGN-FPFVTEIFDIPVYHFY 624
Query: 158 KVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
KVI+ FIR E+ L RE+ +HLN +EE++LESM W++ S +++ +
Sbjct: 625 KVIEVFIRAEDGLCREVVKHLNHIEEQILESMAWKRESVLWDRI 668
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 378 FCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYG 437
F K+ LA+VR+ + +L +S ++R+ ++ C + +L + + H+DQ+++C Y
Sbjct: 897 FRKVYHLASVRLRDLCAKLDVSDELRKKIWT-CFEYSLVHCPEIMMDRHLDQLLMCAIYV 955
Query: 438 VAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
+ K++ + +F+ I+ Y QPQ K V+RSV
Sbjct: 956 MTKVTNEDRSFQNIMRCYRTQPQAKSHVYRSVL 988
>gi|149049942|gb|EDM02266.1| retinoblastoma 1 [Rattus norvegicus]
Length = 815
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 47/200 (23%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNIWAE-------------- 85
TPV T M T + L I+ +PS +L N +NI
Sbjct: 261 TPVRTVMNTIQQLMVILNSASDQPSENLISYFSNCTVNPKENILKRVKDVGHIFKEKFAS 320
Query: 86 -----------QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E
Sbjct: 321 AVGQGCIDIGAQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALE 380
Query: 130 LVLATHKTVTML----------FLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLN 179
+V+AT+ + +ML F +L + + AF+ KVI+SFI+ E +L RE+ +HL
Sbjct: 381 VVMATY-SRSMLQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLE 439
Query: 180 SLEERLLESMVWEKGSSMYN 199
E R++ES+ W S +++
Sbjct: 440 RCEHRIMESLAWLSDSPLFD 459
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 527 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLENEYELMKDRH 586
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V + II FYN +
Sbjct: 587 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLIREEEFDSIIVFYNSV 646
Query: 483 FAPTVK 488
F +K
Sbjct: 647 FMQRLK 652
>gi|603962|dbj|BAA04958.1| retinoblastoma protein [Rattus norvegicus]
Length = 899
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 47/200 (23%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNIWAE-------------- 85
TPV T M T + L I+ +PS +L N +NI
Sbjct: 345 TPVRTVMNTIQQLMVILNSASDQPSENLISYFSNCTVNPKENILKRVKDVGHIFKEKFAS 404
Query: 86 -----------QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E
Sbjct: 405 AVGQGCIDIGAQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALE 464
Query: 130 LVLATHKTVTML----------FLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLN 179
+V+AT+ + +ML F +L + + AF+ KVI+SFI+ E +L RE+ +HL
Sbjct: 465 VVMATY-SRSMLQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLE 523
Query: 180 SLEERLLESMVWEKGSSMYN 199
E R++ES+ W S +++
Sbjct: 524 RCEHRIMESLAWLSDSPLFD 543
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 611 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPEPEHIIWTLFQHTLENEYELMKDRH 670
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V + II FYN +
Sbjct: 671 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLIREEEFDSIIVFYNSV 730
Query: 483 FAPTVK 488
F +K
Sbjct: 731 FMQRLK 736
>gi|330689525|pdb|3POM|A Chain A, Crystal Structure Of The Unliganded Retinoblastoma Protein
Pocket Domain
gi|330689526|pdb|3POM|B Chain B, Crystal Structure Of The Unliganded Retinoblastoma Protein
Pocket Domain
Length = 352
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 83/152 (54%), Gaps = 18/152 (11%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 68 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 127
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 128 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAW 187
Query: 192 EKGSSMYN----SLTVARPALSAEINLGFTDI 219
S +++ S V R + S ++L + +
Sbjct: 188 LSDSPLFDLIKQSKLVPRGSKSTSLSLFYKKV 219
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 346 LKSKPLPPPLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRES 405
L PL + ++ P G T +++ + K+ +LA +R+N + ERL E
Sbjct: 188 LSDSPLFDLIKQSKLVPRGS----KSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEH 243
Query: 406 VYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQV 465
+ + TL L + H+DQI++C YG+ K+ ++L FK I+ Y P +
Sbjct: 244 IIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQET 303
Query: 466 FRSVF----DHVDIITFYNKIFAPTVK 488
F+ V ++ II FYN +F +K
Sbjct: 304 FKRVLIKEEEYDSIIVFYNSVFMQRLK 330
>gi|288558841|sp|P33568.3|RB_RAT RecName: Full=Retinoblastoma-associated protein; AltName: Full=pRb;
Short=Rb; AltName: Full=pp105
Length = 920
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 47/200 (23%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNIWAE-------------- 85
TPV T M T + L I+ +PS +L N +NI
Sbjct: 366 TPVRTVMNTIQQLMVILNSASDQPSENLISYFSNCTVNPKENILKRVKDVGHIFKEKFAS 425
Query: 86 -----------QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E
Sbjct: 426 AVGQGCIDIGAQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALE 485
Query: 130 LVLATHKTVTML----------FLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLN 179
+V+AT+ + +ML F +L + + AF+ KVI+SFI+ E +L RE+ +HL
Sbjct: 486 VVMATY-SRSMLQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLE 544
Query: 180 SLEERLLESMVWEKGSSMYN 199
E R++ES+ W S +++
Sbjct: 545 RCEHRIMESLAWLSDSPLFD 564
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 632 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLENEYELMKDRH 691
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V + II FYN +
Sbjct: 692 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLIREEEFDSIIVFYNSV 751
Query: 483 FAPTVK 488
F +K
Sbjct: 752 FMQRLK 757
>gi|281332095|ref|NP_058741.1| retinoblastoma-associated protein [Rattus norvegicus]
Length = 920
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 47/200 (23%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNIWAE-------------- 85
TPV T M T + L I+ +PS +L N +NI
Sbjct: 366 TPVRTVMNTIQQLMVILNSASDQPSENLISYFSNCTVNPKENILKRVKDVGHIFKEKFAS 425
Query: 86 -----------QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E
Sbjct: 426 AVGQGCIDIGAQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALE 485
Query: 130 LVLATHKTVTML----------FLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLN 179
+V+AT+ + +ML F +L + + AF+ KVI+SFI+ E +L RE+ +HL
Sbjct: 486 VVMATY-SRSMLQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLE 544
Query: 180 SLEERLLESMVWEKGSSMYN 199
E R++ES+ W S +++
Sbjct: 545 RCEHRIMESLAWLSDSPLFD 564
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 632 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPEPEHIIWTLFQHTLENEYELMKDRH 691
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V + II FYN +
Sbjct: 692 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLIREEEFDSIIVFYNSV 751
Query: 483 FAPTVK 488
F +K
Sbjct: 752 FMQRLK 757
>gi|322789792|gb|EFZ14956.1| hypothetical protein SINV_13137 [Solenopsis invicta]
Length = 965
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 80/138 (57%), Gaps = 6/138 (4%)
Query: 70 SADLQGANLMDNI-WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCM 123
+AD+ AN + ++R L L YK+LE + E + ++T+L F +C+
Sbjct: 431 NADMTNANDGSAFDFGKKRLLMGQTLFYKLLEVILNDEKRKKPNDDITNLLLNEVFIQCL 490
Query: 124 LACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEE 183
AC E+V+ ++K+ +F +L+ + + A+ KVI+ IR E+ L R++ +HLN +EE
Sbjct: 491 FACCLEIVIYSYKSNDKIFPWILKALNLDAYYFYKVIEIIIRAEDQLSRDVVKHLNHIEE 550
Query: 184 RLLESMVWEKGSSMYNSL 201
++LES+ W+ S ++ ++
Sbjct: 551 KILESLAWQSDSPLWQTI 568
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 117/292 (40%), Gaps = 70/292 (23%)
Query: 357 PTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLN 416
PT++ +P + + F K LA VR+ + L++S ++ ++ + + ++
Sbjct: 693 PTQATNRDATKPKRTGSVALFFRKFYNLACVRMQDLCNSLEISDNDKKKIWTIF-EYSIK 751
Query: 417 QRTSLFFNCHIDQIILCCFYGVAKISQLNL-TFKEIIYNYGKQPQCKPQVFRSVF----- 470
+R L + H+DQI++C Y + K+ ++ +F EI+ Y QPQ + ++RSV
Sbjct: 752 ER-KLMKDRHLDQILMCAIYVICKLVRMERNSFTEIMRCYRLQPQAESHIYRSVLIKKVS 810
Query: 471 --------------------DHV---------------------DIITFYNKIFAPTVKP 489
+++ D+I FYNK++ P VK
Sbjct: 811 NDEDPGTSGNERSEDNNMLGENITPPTPTNMTGTSQNFNGEIRDDLIKFYNKVYVPQVKE 870
Query: 490 LLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPL-RTSEMDAL 548
+ G + R S +N S+ P LP S V S + RT + A+
Sbjct: 871 FANKFG-------STRGSVMN----LSLSP-LPKGKAPANSPVRRVTSSIMTRTLDPKAI 918
Query: 549 ISHSSKSYYACVGESTHAYSPFKDLTDINHRL---NSNRRVRGALNFDDVDV 597
+ + C SP KDL IN + ++ + V L DD DV
Sbjct: 919 SASPAPQLTYCFSR-----SPAKDLEAINKMMISVDAKKSVGKRLLSDDTDV 965
>gi|358339643|dbj|GAA47664.1| retinoblastoma-like, partial [Clonorchis sinensis]
Length = 1048
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 141/615 (22%), Positives = 232/615 (37%), Gaps = 133/615 (21%)
Query: 64 PLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAK---------- 113
P+ S SA+ +N++ A+QR L Y VLE + E + + +
Sbjct: 414 PVVSSGSAE---SNMLAISAAQQRLHLGCILYYLVLENILVDEIRKIEKRLTSSTSVVDD 470
Query: 114 ---------NLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKV 159
NLT+L FHR + AC ELVL + F +LE + + + N KV
Sbjct: 471 AALARRMKPNLTTLLSQELFHRSLFACCMELVLISSDAPEHHFPWILEALSLDSLNFFKV 530
Query: 160 IQSFIRHEESLPRELRRHLNSLEERLLE-------SMVWE--KGSSMYNSLTVARPALSA 210
I+ +R + PR++ +++N + E +L+ S +W K S S+ P
Sbjct: 531 IEVVVRSID-FPRDMVKYMNQVAELILDSYAWRASSPLWSMLKASGRAPSIEEVIPPEKL 589
Query: 211 EINLG----FTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEPFTEVDSIFL 266
E + G T+ D++ S S L + P SP +Q
Sbjct: 590 ERSSGNEFPRTESFVSDARKSSMMPLSGLVLKPGPSPLKQPR------------------ 631
Query: 267 LIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELVTD-DYRSV 325
LIP + + + SG L P H L + + TD + SV
Sbjct: 632 LIPSSNTGGLFRTRSMDSG-LLPKHQLIGPSEDESAQAAAQLLASGEELDAPTDTNLTSV 690
Query: 326 LVERNNFTSL--VKDCLLGLNNLKSKPLP------PPLYPTRSNPGGGGEPCAETGINIC 377
E N T + L+S P L+ SN P + I
Sbjct: 691 HTEEINLTGPEPITSVAGSKGTLESGPSETVADSEQSLWSAASNAILSYYPTRHDSLAIF 750
Query: 378 FCKINKLAAVRINAMVERLQLSQQIRESVYC---LCPKRTLNQRTSLFFNCHIDQIILCC 434
F ++A+ R+ + ERL L + I ++ LC + L + +DQI+LC
Sbjct: 751 FRHFYRVASARLRDICERLNLQRDILVKIWTGFELC----VVHEVELLRDRCLDQILLCS 806
Query: 435 FYGVAKISQLN-LTFKEIIYNYGKQPQCKPQVFRSVF------------DHVDIITFYNK 481
+GV K+ L+F +I+ Y QPQ ++R V + DI FYN
Sbjct: 807 LFGVCKLVLYRPLSFVDIVQVYRMQPQSNRDIYRRVLLNRVTYGHSSGEERGDITRFYNT 866
Query: 482 IFAPTVKPLLVELGPVGTAMKTNRDS--EVNHNNDASVFPALPDMSP------------- 526
+F +K L + +A T+R S +V +A + P ++P
Sbjct: 867 VFLMRMKDFLQK---AASATSTDRTSAADVTPWPNAGRWMGPPSLAPLPIQKSNAIPAGT 923
Query: 527 ----------------KKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPF 570
+++++ +V++SP++ ++ S K VG ST
Sbjct: 924 GFGGTASAGPIDITQARRLASNRNVFISPVKHQ-----VNLSPKRVVFTVGRSTG----- 973
Query: 571 KDLTDINHRLNSNRR 585
KDL D+N ++S R
Sbjct: 974 KDLQDVNVMISSAER 988
>gi|170523026|gb|ACB20723.1| retinoblastoma 1 [Ovis aries]
Length = 260
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 14/134 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKT--- 137
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+
Sbjct: 65 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSMS 124
Query: 138 ------VTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 125 QSLDTGTDLSFPWILNVFNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAW 184
Query: 192 EKGSSMYNSLTVAR 205
S +++ + A+
Sbjct: 185 LSDSPLFDLIKQAK 198
>gi|388326925|pdb|4ELJ|A Chain A, Crystal Structure Of The Inactive Retinoblastoma Protein
Phosphorylated At T373
Length = 656
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 372 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 431
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 432 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAW 491
Query: 192 EKGSSMYN 199
S +++
Sbjct: 492 LSDSPLFD 499
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 354 PLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKR 413
PL+ P T +++ + K+ +LA +R+N + ERL E + +
Sbjct: 496 PLFDLIKQSKDREGPLKSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQH 555
Query: 414 TLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--- 470
TL L + H+DQI++C YG+ K+ ++L FK I+ Y P + F+ V
Sbjct: 556 TLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKE 615
Query: 471 -DHVDIITFYNKIFAPTVK 488
++ II FYN +F +K
Sbjct: 616 EEYDSIIVFYNSVFMQRLK 634
>gi|426375441|ref|XP_004054547.1| PREDICTED: retinoblastoma-associated protein-like [Gorilla gorilla
gorilla]
Length = 645
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 14/125 (11%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 521 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 580
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 581 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAW 640
Query: 192 EKGSS 196
SS
Sbjct: 641 LSVSS 645
>gi|4139826|pdb|1GUX|A Chain A, Rb Pocket Bound To E7 Lxcxe Motif
gi|29726891|pdb|1O9K|A Chain A, Crystal Structure Of The Retinoblastoma Tumour Suppressor
Protein Bound To E2f Peptide
gi|29726893|pdb|1O9K|C Chain C, Crystal Structure Of The Retinoblastoma Tumour Suppressor
Protein Bound To E2f Peptide
gi|29726895|pdb|1O9K|E Chain E, Crystal Structure Of The Retinoblastoma Tumour Suppressor
Protein Bound To E2f Peptide
gi|29726897|pdb|1O9K|G Chain G, Crystal Structure Of The Retinoblastoma Tumour Suppressor
Protein Bound To E2f Peptide
Length = 218
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 45/199 (22%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADL----------------QGANLMDNIWAE---- 85
TPV T M T + L I+ +PS +L + + I+ E
Sbjct: 2 TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDIGYIFKEKFAK 61
Query: 86 -----------QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E
Sbjct: 62 AVGQGCVEIGSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALE 121
Query: 130 LVLATHKTVT---------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNS 180
+V+AT+ T + F +L + + AF+ KVI+SFI+ E +L RE+ +HL
Sbjct: 122 VVMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLER 181
Query: 181 LEERLLESMVWEKGSSMYN 199
E R++ES+ W S +++
Sbjct: 182 CEHRIMESLAWLSDSPLFD 200
>gi|149635912|ref|XP_001514098.1| PREDICTED: retinoblastoma-associated protein [Ornithorhynchus
anatinus]
Length = 917
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 12/126 (9%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATH----- 135
QR ++L Y+V+E+M +E + L +N + L FH +LA + E+V+AT+
Sbjct: 435 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNTFHTSLLASAVEIVMATYGRSGS 494
Query: 136 --KTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEK 193
F +L + + AF+ KVI+SFI+ E SL RE+ +HL E R++ES+ W+
Sbjct: 495 QNNGAGTDFPWILNVLDLKAFDFYKVIESFIKAEASLTREMIKHLERCEHRIMESLAWQS 554
Query: 194 GSSMYN 199
S +++
Sbjct: 555 DSPLFD 560
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 24/181 (13%)
Query: 372 TGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQII 431
T +++ + K+ +LA +R+N++ RL E + + TL L + H+DQI+
Sbjct: 634 TSLSLFYKKVYRLAYLRLNSLCSRLLSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIM 693
Query: 432 LCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKIFAPTV 487
+C YG+ K+ ++L FK I+ Y + F+ V + II FYN +F +
Sbjct: 694 MCSMYGICKVKNIDLKFKMIVTAYKDLTHAIQETFKRVLIREGQYDSIIVFYNLVFMQKL 753
Query: 488 KPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSAT------HSVYVSPLR 541
K +++ S P +P SP K S++ ++Y+SPL+
Sbjct: 754 KTNILQYASTRPPT-------------LSPIPHIP-RSPYKFSSSPLRVPGGNIYISPLK 799
Query: 542 T 542
+
Sbjct: 800 S 800
>gi|348541737|ref|XP_003458343.1| PREDICTED: retinoblastoma-like protein 2 [Oreochromis niloticus]
Length = 1188
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 42/224 (18%)
Query: 22 LASPVKTITSPLSPHHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSADL-------- 73
LAS +K +++PL+ + +P+S+AM + L T++ PSA L
Sbjct: 464 LASALK-VSTPLTGRKYVQEGSLASPLSSAMKSVGRLHTLLSGTKQGPSAKLAETLRSCA 522
Query: 74 --------QGANLMDNIWAEQRRLEALK-------------------LNYKVLETMCTAE 106
Q N M +++++ +A L Y++LE++ E
Sbjct: 523 RDPSDAISQRLNDMFDVFSQHYEDDAADGSRAIGKDIAVKYFHLAQALYYRILESVIERE 582
Query: 107 AQVLHAKNLT-----SLFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQ 161
+L +L+ +FHR +LAC E+V+ +++ F VL + A++ KVI+
Sbjct: 583 KMILGDADLSCILEQDIFHRSLLACCLEIVIFSYRPPGD-FPNVLGIFQLPAYHFYKVIE 641
Query: 162 SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 205
+R E+ L RE+ +HLN +EE++LES+ W S ++ SL A+
Sbjct: 642 VLVRAEQGLFREVVKHLNQVEEQVLESLAWTGDSPLWESLRGAK 685
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 374 INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILC 433
+++ F K+ LA+VR+ + RL + ++R ++ C + +L T + + H+DQ+++C
Sbjct: 875 LSLFFRKVYHLASVRLRDLCTRLDIMPELRRKIWT-CFEYSLVHCTDMMMDRHLDQLLMC 933
Query: 434 CFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
Y +AK+++ + +F+ I+ Y QPQ V+RSV
Sbjct: 934 AVYVMAKVTKEDRSFQNIMKCYRSQPQASSNVYRSVL 970
>gi|431902377|gb|ELK08878.1| Retinoblastoma-associated protein [Pteropus alecto]
Length = 925
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 72/128 (56%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 441 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNTFHMSLLACALEVVMATYSRSTS 500
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + AF+ KVI+SFI+ E +L R++ +HL E R++ES+ W
Sbjct: 501 QNLDTGTDLSFPWILNVFNLKAFDFYKVIESFIKAEANLTRDMIKHLERCEHRIMESLAW 560
Query: 192 EKGSSMYN 199
S +++
Sbjct: 561 LSNSPLFD 568
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 637 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 696
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 697 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSV 756
Query: 483 FAPTVK 488
F +K
Sbjct: 757 FMQRLK 762
>gi|158430673|pdb|2R7G|A Chain A, Structure Of The Retinoblastoma Protein Pocket Domain In
Complex With Adenovirus E1a Cr1 Domain
gi|158430675|pdb|2R7G|C Chain C, Structure Of The Retinoblastoma Protein Pocket Domain In
Complex With Adenovirus E1a Cr1 Domain
Length = 347
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 65 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 124
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 125 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAW 184
Query: 192 EKGSSMYN 199
S +++
Sbjct: 185 LSDSPLFD 192
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
Query: 372 TGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQII 431
T +++ + K+ +LA +R+N + ERL E + + TL L + H+DQI+
Sbjct: 205 TSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQIM 264
Query: 432 LCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKIFAPTV 487
+C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +F +
Sbjct: 265 MCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSVFMQRL 324
Query: 488 K 488
K
Sbjct: 325 K 325
>gi|307194380|gb|EFN76703.1| Retinoblastoma-like protein 1 [Harpegnathos saltator]
Length = 1025
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 73/124 (58%), Gaps = 5/124 (4%)
Query: 83 WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKT 137
+ ++R L L YK+LE + E + ++T+L F +C+ AC E+V+ ++K+
Sbjct: 468 FGKKRLLMGQTLFYKLLEMILNDEKRKKPNYDVTNLLSNELFIQCLFACCLEIVIYSYKS 527
Query: 138 VTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSM 197
+F +L + + A+ KVI+ +R E+ L RE+ +HLN +EE++LES+ W+ S +
Sbjct: 528 NDKIFPWILNALNLDAYYFYKVIEIIVRTEDQLSREVVKHLNQIEEKILESLAWQSDSPL 587
Query: 198 YNSL 201
+ ++
Sbjct: 588 WQTI 591
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 114/288 (39%), Gaps = 70/288 (24%)
Query: 365 GGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFN 424
+P + + F K LA VR+ + L++S++ + + ++ +RT L +
Sbjct: 725 AAKPKRTGSVALFFRKFYNLACVRMQDLCNSLEISEEEDKKKIWTIFEYSIKERTELMKD 784
Query: 425 CHIDQIILCCFYGVAKISQLNL-TFKEIIYNYGKQPQCKPQVFRSV-------------- 469
H+DQI++C Y + K+ ++ +F EI+ Y QPQ + ++RSV
Sbjct: 785 RHLDQILMCAIYVICKLVKMEKNSFTEIMRCYRLQPQAESHIYRSVLIEKISVNEAKILA 844
Query: 470 -------------------------------FD---HVDIITFYNKIFAPTVKPLLVELG 495
FD D+I FYN ++ P VK G
Sbjct: 845 SGNEKSEGNGTIADKNATPPTPTNMIGTSQNFDGETRGDLIKFYNTVYVPEVKEFANRFG 904
Query: 496 PVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPL-RTSEMDALISHSSK 554
++R S +N S+ P LP P S V S + RT + A+ + +
Sbjct: 905 -------SSRGSVMN----LSLSP-LPKGKPPASSPVRRVTSSIMTRTLDPKAISASPAP 952
Query: 555 SYYACVGESTHAYSPFKDLTDINHRL---NSNRRVRGALNFDDVDVDV 599
C + SP KDL IN + ++ + V L DD DV++
Sbjct: 953 QLSYCF-----SRSPAKDLEAINKMMISVDARKGVGKRLLSDDTDVEM 995
>gi|28373873|pdb|1N4M|A Chain A, Structure Of Rb Tumor Suppressor Bound To The
Transactivation Domain Of E2f-2
gi|28373874|pdb|1N4M|B Chain B, Structure Of Rb Tumor Suppressor Bound To The
Transactivation Domain Of E2f-2
Length = 345
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 65 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 124
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 125 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAW 184
Query: 192 EKGSSMYN 199
S +++
Sbjct: 185 LSDSPLFD 192
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 346 LKSKPLPPPLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRES 405
L PL + +++ G T +++ + K+ +LA +R+N + ERL E
Sbjct: 185 LSDSPLFDLIKQSKTREGKS------TSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEH 238
Query: 406 VYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQV 465
+ + TL L + H+DQI++C YG+ K+ ++L FK I+ Y P +
Sbjct: 239 IIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQET 298
Query: 466 FRSVF----DHVDIITFYNKIFAPTVK 488
F+ V ++ II FYN +F +K
Sbjct: 299 FKRVLIKEEEYDSIIVFYNSVFMQRLK 325
>gi|402591285|gb|EJW85215.1| hypothetical protein WUBG_03875, partial [Wuchereria bancrofti]
Length = 261
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 384 LAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQ 443
LAAVR+ + ER++L ++ R+ + L + L TSL H+DQ ++CC Y VAKI Q
Sbjct: 4 LAAVRLRDLCERVRLDEKGRQRAWTLF-EHVLRTETSLMAGRHLDQNLMCCLYVVAKIGQ 62
Query: 444 LNLTFKEIIYNYGKQPQCKPQVFRSVF 470
N++F +I+Y+Y QPQ +V+R V
Sbjct: 63 QNISFHDIMYHYRHQPQAASRVYRRVL 89
>gi|388326926|pdb|4ELL|A Chain A, Structure Of The Inactive Retinoblastoma Protein Pocket
Domain
gi|388326927|pdb|4ELL|B Chain B, Structure Of The Inactive Retinoblastoma Protein Pocket
Domain
Length = 411
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 72/128 (56%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 68 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 127
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES W
Sbjct: 128 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESFAW 187
Query: 192 EKGSSMYN 199
S +++
Sbjct: 188 LSDSPLFD 195
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + ERL E + + TL L + H
Sbjct: 264 KPLKSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRH 323
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 324 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSV 383
Query: 483 FAPTVK 488
F +K
Sbjct: 384 FMQRLK 389
>gi|410915598|ref|XP_003971274.1| PREDICTED: retinoblastoma-associated protein-like [Takifugu
rubripes]
Length = 913
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 22/150 (14%)
Query: 84 AEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTV 138
QR +KL YK++E M +E + L +N + L FH +LAC+ E+V+AT+
Sbjct: 426 GRQRFNLGVKLYYKIMEAMLKSEEKRLSVQNFSKLLNDSTFHTSLLACALEVVMATYGES 485
Query: 139 T-----------------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSL 181
+ M F +L+ + +TAF+ KVI+SFI+ + +L +++ +HL +
Sbjct: 486 SFKTGGYNQGGGDATERNMCFPWILDVVELTAFDFYKVIESFIKADPTLSKDIVKHLETC 545
Query: 182 EERLLESMVWEKGSSMYNSLTVARPALSAE 211
E ++E + W GS +++ L +AE
Sbjct: 546 ENLIMERIAWRTGSPLFDLLRQEHEGETAE 575
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 97/243 (39%), Gaps = 30/243 (12%)
Query: 353 PPLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPK 412
PP P S P P +++ + K+ +LA R+ + L S E + +
Sbjct: 624 PPTQPV-SQPA---RPLKSNSLSLFYKKLYRLAYTRLKMLCSYLLSSHPELEPIIWTLFQ 679
Query: 413 RTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-- 470
TL L + H+DQ+++C Y + K+ ++L FK I+ Y P F+ V
Sbjct: 680 HTLQHEHELMRDRHLDQLMMCAMYAICKVKTVDLRFKTIVTAYKNMPNTSQDTFKHVLTT 739
Query: 471 --DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDM---- 524
++ II FYN +F +K +++ S P +P
Sbjct: 740 DGNYDSIIVFYNLVFMQKLKTNILQYASTRPPT-------------LSPIPQIPRSPYKF 786
Query: 525 --SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNS 582
SP +V + +VY+SP+++ M + +GE + F+ IN +NS
Sbjct: 787 PNSPLRVPVSSNVYISPMKSPRMSPGMMTPRSRMLVSIGEPFGLINRFQ---KINQMVNS 843
Query: 583 NRR 585
R
Sbjct: 844 GDR 846
>gi|326914172|ref|XP_003203401.1| PREDICTED: retinoblastoma-associated protein-like [Meleagris
gallopavo]
Length = 950
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 47/201 (23%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------WAE 85
TPV AM T + L I+ KPS L N D+I +AE
Sbjct: 392 TPVRAAMNTIQQLMMILNSAIDKPSDTLIAYFNNCTVNPEDSILKRVESLGHIFKKKFAE 451
Query: 86 -----------QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
QR ++L Y+V+E+M +E + L N + L FH +LAC+ E
Sbjct: 452 AVGQGCAEIGSQRYQLGVRLYYRVMESMLKSEEERLSVHNFSKLLNDNIFHTSLLACALE 511
Query: 130 LVLATH-KTVTML----------FLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHL 178
+V+AT+ +T + F +L + AF+ KVI+SFI+ E SL R++ +HL
Sbjct: 512 IVMATYGRTASQSDGTSAETDSSFPWILNVFDLKAFDFYKVIESFIKVEPSLTRDMIKHL 571
Query: 179 NSLEERLLESMVWEKGSSMYN 199
E R++ES+ W+ S +++
Sbjct: 572 ERCEHRIMESLAWQSDSPLFD 592
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 88/180 (48%), Gaps = 11/180 (6%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R++ + RL E + + TL L + H
Sbjct: 661 KPQKSTSLSLFYKKVFRLAYLRLHTLFFRLLSEHPDLEPLIWTLFQHTLQNEYELMRDRH 720
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y + P + F+ V + II FYN +
Sbjct: 721 LDQIMMCSMYGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLIREEQYDSIIVFYNLV 780
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRT 542
F +K +++ +NR ++ P SP++V A +++Y+SPL++
Sbjct: 781 FMQKLKTNILQYA-------SNRPPTLSPIPHIPRSPYQFSNSPRRVPAGNNIYISPLKS 833
>gi|17942636|pdb|1GH6|B Chain B, Retinoblastoma Pocket Complexed With Sv40 Large T Antigen
Length = 333
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 83/150 (55%), Gaps = 16/150 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 66 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 125
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 126 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAW 185
Query: 192 EKGSSMYNSLTVAR--PALSAEINLGFTDI 219
S +++ + ++ P S ++L + +
Sbjct: 186 LSDSPLFDLIKQSKLVPRGSTSLSLFYKKV 215
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P T +++ + K+ +LA +R+N + ERL E + + TL L + H+
Sbjct: 202 PRGSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRHL 261
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKIF 483
DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +F
Sbjct: 262 DQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSVF 321
Query: 484 APTVK 488
+K
Sbjct: 322 MQRLK 326
>gi|297694049|ref|XP_002824310.1| PREDICTED: retinoblastoma-associated protein, partial [Pongo
abelii]
Length = 438
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 69/120 (57%), Gaps = 14/120 (11%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 317 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 376
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 377 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAW 436
>gi|291190170|ref|NP_001167086.1| Retinoblastoma-associated protein [Salmo salar]
gi|223648042|gb|ACN10779.1| Retinoblastoma-associated protein [Salmo salar]
Length = 910
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 76/143 (53%), Gaps = 21/143 (14%)
Query: 84 AEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTV 138
+QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+
Sbjct: 425 GKQRFTLGIRLYYRVMESMLKSEEKRLSVQNFSKLLNDSTFHTSLLACALEVVMATYGGS 484
Query: 139 T----------------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLE 182
T + F +L+ +TAF+ KVI+SFI+ E SL +++ +HL E
Sbjct: 485 TFKSAGYSNGGVPVETDLCFPWILDVFQLTAFDFYKVIESFIKAEPSLSKDMVKHLERCE 544
Query: 183 ERLLESMVWEKGSSMYNSLTVAR 205
++E++ W + S ++ L R
Sbjct: 545 HLIMETIAWREDSPLFELLKRTR 567
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 97/219 (44%), Gaps = 18/219 (8%)
Query: 373 GINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIIL 432
+++ + K+ +LA +R+ + +L S E + + TL L + H+DQ+++
Sbjct: 635 SLSLFYKKLYRLAYMRLKMLYTQLLTSHPELEPIMWTLFQHTLQNEYELMRDRHLDQLMM 694
Query: 433 CCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKIFAPTVK 488
Y + K+ ++L FK I+ Y P + F+ V + II FYN +F +K
Sbjct: 695 SAMYAICKVKNVDLRFKTIVTAYKNMPNTNQETFKHVLIREGQYDSIIVFYNLVFMQKLK 754
Query: 489 PLLVELG-PVGTAMKTNRDSEVNH-NNDASVFPALPDMSPKKVSATHSVYVSPLRTSEMD 546
+++ P + S + H FP SP +V +++VY+SP+++
Sbjct: 755 TNILQYASPRPPTL-----SPIPHIPRSPYKFPN----SPLRVPGSNNVYISPMKSPTRM 805
Query: 547 ALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNRR 585
+ + +GES F+ IN +NS+ R
Sbjct: 806 SPVMTPRTRILVSIGESFGTSDKFQ---KINAMVNSSDR 841
>gi|410907800|ref|XP_003967379.1| PREDICTED: retinoblastoma-like protein 2-like [Takifugu rubripes]
Length = 1084
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 41/246 (16%)
Query: 5 LFGGAVNITGA-KRKFDSLASPVKTITSPLSPHHSSTSKMVVTPVSTAMTTAKWLRTIIC 63
L+ G N A R SL + + +PL+ +V +P+STAM + L T++
Sbjct: 335 LYEGLENQNSAISRLHVSLTASALKVATPLTGRKYIQENVVASPISTAMNSVGRLHTLLS 394
Query: 64 PLPSKPSADL-------------------QG-----ANLMDNIWAEQRRLE--------- 90
PSA L QG + + AE R +
Sbjct: 395 GTQQGPSAKLAETFRACARDPSDVITRRLQGMFELFSQHFEGSGAENRGMGKEMAVKYFH 454
Query: 91 -ALKLNYKVLETMCTAEAQVLHAKNLT-----SLFHRCMLACSAELVLATHKTVTMLFLA 144
A L Y+ LE++ E +L +L+ +FHR +L C E+V+ +++ F
Sbjct: 455 LAEALYYRTLESIIEREKMILGNADLSCILEQDVFHRSLLVCCLEIVIFSYRPPGD-FPN 513
Query: 145 VLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
++ + A++ KVI+ +R E+ L RE+ +HLN +EE++LES+ W S ++ +L A
Sbjct: 514 LISIFQLPAYHFYKVIEVLVRSEQGLFREVVKHLNQVEEQVLESLAWTSNSPLWETLRGA 573
Query: 205 RPALSA 210
+ + A
Sbjct: 574 KDQVPA 579
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ +A+VR+ + +L +S ++R ++ C + +L T+L + H+
Sbjct: 763 PLRKGSLSLFFRKLYHMASVRLRDLCAKLDISAELRRKIWT-CFEYSLVHCTNLMMDRHL 821
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y ++K+++ + +F+ I+ Y QPQ V+R V
Sbjct: 822 DQLLMCAVYIMSKVTKEDRSFQNIMKCYRTQPQAGSNVYRCVL 864
>gi|332017056|gb|EGI57855.1| Retinoblastoma-like protein 1 [Acromyrmex echinatior]
Length = 1042
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 74/124 (59%), Gaps = 5/124 (4%)
Query: 83 WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKT 137
+ ++R L L YK+LE + E + ++T+L F +C+ AC E+V+ ++K+
Sbjct: 488 FGKKRLLMGQTLFYKLLEMILNDEKRKKPNDDITNLLLNAVFIQCLFACCLEIVIYSYKS 547
Query: 138 VTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSM 197
+F +L+ + + A+ KVI+ +R E+ L R++ +HLN +EE++LES+ W+ S +
Sbjct: 548 NDKVFPWILKALNLDAYYFYKVIEIIVRAEDQLSRDVVKHLNHIEEKILESLAWQSDSPL 607
Query: 198 YNSL 201
+ ++
Sbjct: 608 WQTI 611
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 113/287 (39%), Gaps = 73/287 (25%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P + + F K LA VR+ + L++S ++ ++ + + ++ +RT L + H
Sbjct: 745 KPKRTGSVALFFRKFYNLACVRMQDLCNSLEISDNDKKKIWTIF-EYSVKERTKLMKDRH 803
Query: 427 IDQIILCCFYGVAKISQLNL-TFKEIIYNYGKQPQCKPQVFRSV---------------- 469
+DQI++C Y + K+ ++ +F EI+ Y QPQ + ++RSV
Sbjct: 804 LDQILMCAIYVICKLVRIERNSFTEIMRCYRLQPQAESHIYRSVLIEKVSNDGDSKTNSN 863
Query: 470 ----------------------------FD---HVDIITFYNKIFAPTVKPLLVELGPV- 497
FD D+I FYN ++ P VK + G
Sbjct: 864 ERSENNSTSVAENVTPPTPTNMAGTSQNFDGEIRGDLIKFYNTMYVPQVKEFANKFGSAR 923
Query: 498 GTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPL-RTSEMDALISHSSKSY 556
G+ M + S+ P LP S V S + RT + A+I+ +
Sbjct: 924 GSVM------------NLSLSP-LPKGKAPANSPVRRVTGSIMTRTLDPKAIIASPAPQL 970
Query: 557 YACVGESTHAYSPFKDLTDINHRL----NSNRRVRGALNFDDVDVDV 599
C + SP KDL IN + + V L DD DV++
Sbjct: 971 SYCF-----SRSPAKDLEAINKMMICVDAKKKSVGKRLLSDDTDVEM 1012
>gi|194390566|dbj|BAG62042.1| unnamed protein product [Homo sapiens]
Length = 907
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 72/128 (56%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ +V+AT+ T
Sbjct: 423 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALGVVMATYSRSTS 482
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 483 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAW 542
Query: 192 EKGSSMYN 199
S +++
Sbjct: 543 LSDSPLFD 550
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+ + ERL E + + TL L + H
Sbjct: 619 KPLKSTSLSLFYKKVYRLAYLRLITLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRH 678
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 679 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSV 738
Query: 483 FAPTVK 488
F +K
Sbjct: 739 FMQRLK 744
>gi|195564497|ref|XP_002105853.1| GD16459 [Drosophila simulans]
gi|194203216|gb|EDX16792.1| GD16459 [Drosophila simulans]
Length = 845
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 370 AETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQ 429
A + I K+ L +RI + L L ++ ES++ + + ++ T L + H+DQ
Sbjct: 578 AAGALQIFLRKVYLLGWLRIQKLCSELSLCEKTPESIWHIF-EHSITHETDLMKDRHLDQ 636
Query: 430 IILCCFYGVAKISQL-NLTFKEIIYNYGKQPQCKPQVFRSVFDHV---------DIITFY 479
I+C Y ++ ++ + F +I+ Y QPQ V+R VF + DII FY
Sbjct: 637 NIMCAIYIYIRVKRMEDPKFSDIMRAYRNQPQAVNSVYREVFMDINEDGEPKVNDIIHFY 696
Query: 480 NKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSP 539
N + P ++ +++ V T + R S++ S P PKKV+ +HS++VS
Sbjct: 697 NHAYVPLMRQFVIDYLNV-TPDASGRASDLQ----LSPHPKERAAQPKKVTQSHSLFVSQ 751
Query: 540 LRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNRRVRGALNFDD 594
+ +E+ S + Y C SP KDL +N ++ +R+ L+F D
Sbjct: 752 MSKNEIQQ--SPNQMVYSFC-------RSPAKDLQAMNEKVRGGKRM---LSFGD 794
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 118 LFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRH---EESLPREL 174
+F+ ++AC ELVL +KT + F VL+ I+AF K+I+ +RH E L R L
Sbjct: 475 IFNITLMACCVELVLEAYKT-ELKFPWVLDCFSISAFEFQKIIEIVVRHGSHEGCLNRSL 533
Query: 175 RRHLNSLEERLLESMVWEKGSSMYNSLTVAR 205
+HLNS+EE LE + W + S++++ + A+
Sbjct: 534 IKHLNSIEETCLERLAWARNSTVWDMIASAQ 564
>gi|387018056|gb|AFJ51146.1| Retinoblastoma-associated protein-like [Crotalus adamanteus]
Length = 916
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 71/129 (55%), Gaps = 16/129 (12%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKT--- 137
QR ++L Y+V+E++ +E Q L N + L FH +LAC+ ELV+AT+ T
Sbjct: 432 QRYKIGVRLYYRVMESLLKSEEQRLSVHNFSKLLNNDIFHISLLACALELVMATYGTSRN 491
Query: 138 --------VTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESM 189
+ F ++ + + AF L +++SFI+ E SL RE+ +HL E +++ES+
Sbjct: 492 ASQSMKIETDLSFPWIINILDLKAFELYMIVESFIKAEPSLTREMIKHLEGCEHKIMESL 551
Query: 190 VWEKGSSMY 198
W+ S ++
Sbjct: 552 AWQSNSPLF 560
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 22/206 (10%)
Query: 347 KSKPLPPPLYPTRSNPGGGGEP---CAETGINICFCKINKLAAVRINAMVERLQLSQQIR 403
K K P +Y S G +P ++ + K+ LA R+N++ RL
Sbjct: 604 KKKVSPAFVYSQESQGLGLNQPQKPYKSISLSYFYKKVYCLAYRRLNSLCLRLLPDHPEL 663
Query: 404 ESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKP 463
E + TL L + H+DQI++C YG+ K+ ++L FK I+ Y
Sbjct: 664 EHLIWTLFHHTLQNEYELMKDRHLDQIMMCSMYGICKVKNIDLRFKTIVTAYKDLNNANQ 723
Query: 464 QVFRSVF----DHVDIITFYNKIFAPTVKPLLVELG----PVGTAMKTNRDSEVNHNNDA 515
+ F+ V + II FYN +F +K +++ P T + S +N
Sbjct: 724 ETFKCVLIREGQYDSIIVFYNMVFMQRLKTNILQYASNRPPTLTPIPHILQSPYKFSN-- 781
Query: 516 SVFPALPDMSPKKVSATHSVYVSPLR 541
SP +VSA +++YVSPL+
Sbjct: 782 ---------SPLRVSAGNNIYVSPLK 798
>gi|225756|prf||1312364A nuclear phosphoprotein
Length = 928
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 73/128 (57%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 444 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 503
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ ++L E R++ES+ W
Sbjct: 504 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKNLERCEHRIMESLAW 563
Query: 192 EKGSSMYN 199
S +++
Sbjct: 564 LSDSPLFD 571
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + ERL E + + TL L + H
Sbjct: 640 KPLKSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRH 699
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 700 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSV 759
Query: 483 FAPTVK 488
F +K
Sbjct: 760 FMQRLK 765
>gi|348538760|ref|XP_003456858.1| PREDICTED: retinoblastoma-associated protein-like [Oreochromis
niloticus]
Length = 912
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 53/219 (24%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADL-------------------------------Q 74
TP+ AMT+ + LR + +PSA+L Q
Sbjct: 358 TPIRAAMTSIQLLRGDLTSSGDQPSANLVTYFKHCTVDPTQDVQKRLETLGQVFSQRFGQ 417
Query: 75 GANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
++ QR ++L Y+V+E M +E + L +N + L FH +LAC+ E
Sbjct: 418 AVGPHCVVYGRQRFTLGVRLYYRVMEEMLKSEEKRLSVQNFSKLLNDSTFHTSLLACALE 477
Query: 130 LVLATH-----------------KTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPR 172
+V+AT+ + F +L +TAF+ KVI+SFI+ + +L +
Sbjct: 478 VVMATYGESSFKNGGYSHGGADSAETDVCFPWILNVFNLTAFDFYKVIESFIKADPTLSK 537
Query: 173 ELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPALSAE 211
E+ +HL + E ++E + W GS ++ L + AE
Sbjct: 538 EIVKHLETCENLIMERLAWRTGSPLFELLKQEHESGGAE 576
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P +++ + K+ +LA R+ + L S E + + TL L + H+
Sbjct: 632 PLKSNSLSLFYKKLYRLAYTRLKMLCSYLLSSHPEFEPIIWTLFQHTLQHEYELMRDRHL 691
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---DHVD-IITFYNKIF 483
DQ+++ Y + K+ ++L FK I+ Y + F+ V H D II FYN++F
Sbjct: 692 DQLMMSAMYAICKVKSVDLRFKTIVTAYKNMANTSQETFKHVLITEGHYDSIIVFYNQVF 751
Query: 484 APTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRTS 543
+K +++ + R ++ P SP +V +++VY+SPL+++
Sbjct: 752 MQKLKTNILQYA-------STRPPTLSPIPQIPCSPYKFPNSPLRVPGSNNVYISPLKST 804
Query: 544 EMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNRR 585
M I +GES + P IN +NS+ R
Sbjct: 805 RMSPGIMTPRSKMLVSIGES---FGPSNRFQKINQMVNSSDR 843
>gi|432898488|ref|XP_004076526.1| PREDICTED: retinoblastoma-associated protein isoform 2 [Oryzias
latipes]
Length = 921
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 79/152 (51%), Gaps = 22/152 (14%)
Query: 82 IWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHK 136
++ +R ++L YKV+E M +E + L +N + L FH +LAC+ E+V+AT++
Sbjct: 430 VYGRERFTLGVRLYYKVMEAMLESEEKRLSVQNFSKLLNDSTFHMSLLACALEVVMATYE 489
Query: 137 TVT-----------------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLN 179
+ + F +L+ ++AF+ KVI+SFI+ E +L +++ +HL
Sbjct: 490 ESSFKNRGCSHGEGDQAVRDLCFPWILDVFDLSAFDFYKVIESFIKAEPTLSKDIIKHLE 549
Query: 180 SLEERLLESMVWEKGSSMYNSLTVARPALSAE 211
+ E ++E + W GS ++ L A + E
Sbjct: 550 TCENLIMEKIAWRTGSPLFELLKRENEAGATE 581
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 97/234 (41%), Gaps = 14/234 (5%)
Query: 357 PTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLN 416
PT G +++ + K+ +LA R+ + L + E V + TL
Sbjct: 630 PTPQAAGQAPRQPKSNSLSLFYKKLYRLAYTRLKTLCSCLLSNHPDLEHVIWTLFQHTLQ 689
Query: 417 QRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DH 472
L + H+DQ+++ Y + K+ ++L FK I+ Y P + F+ V +
Sbjct: 690 YEYDLMRDRHLDQLMMSAMYAICKVKSVDLRFKLIVSAYKNMPNTSQETFKHVLITEGQY 749
Query: 473 VDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSAT 532
II FYN++F +K +++ + R ++ P SP +V +
Sbjct: 750 DSIIVFYNQVFMQKLKTNILQYA-------STRPPTLSPIPQIPCSPYKFPNSPLRVPGS 802
Query: 533 HSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNRRV 586
++VY+SPL+ S + + +GES + F+ IN +NS R
Sbjct: 803 NNVYISPLKNSRLSPGMMTPRSRMLVSIGESFGFANRFQ---KINQMVNSGDRA 853
>gi|432898486|ref|XP_004076525.1| PREDICTED: retinoblastoma-associated protein isoform 1 [Oryzias
latipes]
Length = 916
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 79/152 (51%), Gaps = 22/152 (14%)
Query: 82 IWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHK 136
++ +R ++L YKV+E M +E + L +N + L FH +LAC+ E+V+AT++
Sbjct: 425 VYGRERFTLGVRLYYKVMEAMLESEEKRLSVQNFSKLLNDSTFHMSLLACALEVVMATYE 484
Query: 137 TVT-----------------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLN 179
+ + F +L+ ++AF+ KVI+SFI+ E +L +++ +HL
Sbjct: 485 ESSFKNRGCSHGEGDQAVRDLCFPWILDVFDLSAFDFYKVIESFIKAEPTLSKDIIKHLE 544
Query: 180 SLEERLLESMVWEKGSSMYNSLTVARPALSAE 211
+ E ++E + W GS ++ L A + E
Sbjct: 545 TCENLIMEKIAWRTGSPLFELLKRENEAGATE 576
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 97/234 (41%), Gaps = 14/234 (5%)
Query: 357 PTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLN 416
PT G +++ + K+ +LA R+ + L + E V + TL
Sbjct: 625 PTPQAAGQAPRQPKSNSLSLFYKKLYRLAYTRLKTLCSCLLSNHPDLEHVIWTLFQHTLQ 684
Query: 417 QRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DH 472
L + H+DQ+++ Y + K+ ++L FK I+ Y P + F+ V +
Sbjct: 685 YEYDLMRDRHLDQLMMSAMYAICKVKSVDLRFKLIVSAYKNMPNTSQETFKHVLITEGQY 744
Query: 473 VDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSAT 532
II FYN++F +K +++ + R ++ P SP +V +
Sbjct: 745 DSIIVFYNQVFMQKLKTNILQYA-------STRPPTLSPIPQIPCSPYKFPNSPLRVPGS 797
Query: 533 HSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNRRV 586
++VY+SPL+ S + + +GES + F+ IN +NS R
Sbjct: 798 NNVYISPLKNSRLSPGMMTPRSRMLVSIGESFGFANRFQ---KINQMVNSGDRA 848
>gi|426242350|ref|XP_004015036.1| PREDICTED: retinoblastoma-like protein 2 [Ovis aries]
Length = 1082
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 44/226 (19%)
Query: 16 KRKFDSLASPVKTITSPLSP-HHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSADLQ 74
+R FD S +++PL+ + S VTPVSTA + L T++ L + PS L+
Sbjct: 331 QRHFDR--SKALRVSTPLTGVRYIKDSSPCVTPVSTATHSLSRLHTMLTGLRNAPSEKLE 388
Query: 75 ----------------------------------GANLMDNIWAEQRRLEALKLNYKVLE 100
G+N +I ++ R + L YKVLE
Sbjct: 389 QTLRSCSRDPTQAIANRLKEMYEIYSQHFQSEEDGSNCAKDIASKHFRFAEM-LYYKVLE 447
Query: 101 TMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFN 155
++ E + L +L+ + FHR +LAC E+V ++K F + E + ++
Sbjct: 448 SVIEQEQKRLGDMDLSGILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYH 506
Query: 156 LSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
KVI+ FIR E+ L RE+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 507 FYKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWDRI 552
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 773 PRKTSSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 831
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 832 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 874
>gi|390360951|ref|XP_799020.3| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 2-like
[Strongylocentrotus purpuratus]
Length = 1047
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 9/122 (7%)
Query: 86 QRRLE-ALKLNYKVLETMCTAEAQVLHAKNLT-----SLFHRCMLACSAELVLATHKTVT 139
+RRL+ A L YKVLE + AE + L KNLT LFHR + AC E+V+ + +
Sbjct: 397 KRRLKLAENLYYKVLENIMLAEKRRL--KNLTHLLEHELFHRSLFACCLEVVIFAYNS-Q 453
Query: 140 MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 199
F +LE I AF+ KVI+ +R EE L R++ +HLN +EE +L+ W S +++
Sbjct: 454 RTFPWILEAFEIPAFHFYKVIELILRAEEGLSRDIVKHLNFIEEAILQDYAWRSDSPLWD 513
Query: 200 SL 201
L
Sbjct: 514 LL 515
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P I I F K+ L VR+ + RL+LS +R ++ C + + +T + + H+
Sbjct: 740 PKRTGSIGIFFRKVYHLMNVRLLDLCHRLKLSDDLRRKIWT-CLEHAVVHKTEMMRDRHL 798
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQII+C Y + +++Q +F+EI+ +Y QPQ V+RSV
Sbjct: 799 DQIIMCTMYIICRVTQNPCSFQEIMRSYRFQPQASSHVYRSVL 841
>gi|326680423|ref|XP_002667000.2| PREDICTED: retinoblastoma-like protein 2 [Danio rerio]
Length = 1087
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 40/216 (18%)
Query: 29 ITSPLSPHHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSADLQG---ANLMDNIWAE 85
+++PL+ +V TPVS+AM + L T++ +PS L+ + + D +
Sbjct: 366 VSTPLTGRRYVPESIVGTPVSSAMQSVGRLHTLLTGFKYRPSVKLRDIFRSCVRDPTESV 425
Query: 86 QRRLEALK-------------------------------LNYKVLETMCTAEAQVLHAKN 114
RL+ + L YK LE + E + L +
Sbjct: 426 AARLKEMSEIFLQNYEGTGDDNKSLARDIAVKYFCLAEALYYKSLEVIINQEKKRLGDVD 485
Query: 115 LTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEES 169
L+ + FHR ++AC E+V+ +++ F VL+ + A++ KVI+ +R EE
Sbjct: 486 LSGVLEQDVFHRSLIACCLEIVIFSYRPPGE-FPRVLQIFDLPAYHFYKVIEVLVRAEEG 544
Query: 170 LPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 205
L RE+ +HLN +EE++LES+ W+ S ++ + A+
Sbjct: 545 LFREVVKHLNHVEEQVLESLAWKGNSPLWERIREAK 580
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 343 LNNLKSKPLPPPLYPTRSNPGGGGEPCAETGINIC--FCKINKLAAVRINAMVERLQLSQ 400
+ +++ P PP G + +TG ++C F K+ LA+VR+ + +L +S
Sbjct: 747 MGAVQNNPSPPKQDKKTPQQGTPTKRAQKTG-SLCLFFRKVYHLASVRLRDLCAKLDISA 805
Query: 401 QIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQ 460
+R ++ C + +L T L + H+DQ+++C Y + K+++ + +F+ I+ Y QPQ
Sbjct: 806 DLRRKIWT-CFEYSLVHCTDLMMDRHLDQLLMCAIYVMTKVTKEDKSFQNIMKCYRSQPQ 864
Query: 461 CKPQVFRSVF 470
V+RSV
Sbjct: 865 ASSSVYRSVL 874
>gi|307182540|gb|EFN69736.1| Retinoblastoma-like protein 1 [Camponotus floridanus]
Length = 1039
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 73/124 (58%), Gaps = 5/124 (4%)
Query: 83 WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKT 137
+ ++R + L YK+LE + E + ++T+L F +C+ AC E+V+ ++K+
Sbjct: 482 FGKKRFVMGQTLFYKLLEMILNDEKRKKPNDDITNLLLNEVFIQCLFACCLEIVIYSYKS 541
Query: 138 VTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSM 197
+F +L+ + + A+ KVI+ +R E+ L R++ +HLN +EE++LES+ W S +
Sbjct: 542 NDKIFPWILKALNLDAYYFYKVIEIIVRAEDQLSRDVVKHLNQIEEKILESLAWRSDSPL 601
Query: 198 YNSL 201
+ ++
Sbjct: 602 WQTI 605
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Query: 360 SNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRT 419
+N P + + F K LA VR+ + L++S ++ ++ + + ++ +RT
Sbjct: 737 TNRETTARPRRTGSVALFFRKFYNLACVRMQDLCNSLEISDTDKKKIWTIF-EYSIKERT 795
Query: 420 SLFFNCHIDQIILCCFYGVAKISQLNL-TFKEIIYNYGKQPQCKPQVFRSVF 470
L + H+DQI++C Y + K+ ++ +F EI+ Y QPQ + ++RSV
Sbjct: 796 ELMKDRHLDQILMCAIYVICKLVKMEKNSFTEIMRCYRLQPQAESHIYRSVL 847
>gi|431914123|gb|ELK15382.1| Retinoblastoma-like protein 2, partial [Pteropus alecto]
Length = 974
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 115/245 (46%), Gaps = 40/245 (16%)
Query: 366 GEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNC 425
G P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L +
Sbjct: 716 GRPRKTSSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDR 774
Query: 426 HIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRS---------------VF 470
H+DQ+++C Y +AK+++ + +F+ I+ Y QPQ + Q +
Sbjct: 775 HLDQLLMCAIYVMAKVTKDDRSFQNIMRCYRTQPQARSQPGSAPPTPTRLTGASSDMEEE 834
Query: 471 DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKV- 529
+ D+I FYN I+ +K AMK ++ + + S +P + SP+++
Sbjct: 835 ERGDLIQFYNNIYIKQIKTF---------AMKYSQ-ANIMDAPPLSPYPFVRTGSPRRIQ 884
Query: 530 -SATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNR---R 585
S H VY+SP + M +S K +Y + SP K L +IN + + +
Sbjct: 885 LSQNHPVYISPHKNETM---LSPREKIFY------YFSNSPSKRLREINSMIRTGETPTK 935
Query: 586 VRGAL 590
RG L
Sbjct: 936 KRGIL 940
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 39/172 (22%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCT 104
TPVSTA + L T++ L + PS +L+ ++L T
Sbjct: 350 ATPVSTATHSLSRLHTMLTGLRNAPSENLE----------------------QILRTCAR 387
Query: 105 AEAQVLHAKNLTSLFH---------RCMLACSAELVLATHKTVTMLFLAVLERI------ 149
Q + A L +F C+ E+ + ML+ VLE +
Sbjct: 388 DPTQAI-ANRLKEMFEIYSQHSQPDEDFSTCAKEIASKHFRFAEMLYYKVLESVIEQEQK 446
Query: 150 GITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
+ +LS VI+ FIR E+ L RE+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 447 RLGDMDLS-VIEVFIRAEDGLCREVVKHLNEIEEQILDHLAWKPESPLWDRI 497
>gi|380025341|ref|XP_003696433.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 1-like
[Apis florea]
Length = 1039
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 76 ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAEL 130
AN + + +R L Y++LE + E + ++T+L F +C+ AC E+
Sbjct: 477 ANETTSDFGRKRLYLGQTLFYRLLEMILNDEKRKKPNYDVTNLLTKEIFIQCLFACCLEI 536
Query: 131 VLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMV 190
V+ ++K+ +F +L + + A+ KVI+ +R E+ L R++ +HLN +EE++LES+
Sbjct: 537 VIYSYKSNDKIFPWILNALNLDAYYFYKVIEIIVRAEDQLSRDVVKHLNQIEEKILESLA 596
Query: 191 WEKGSSMYNSL 201
W+ S ++N++
Sbjct: 597 WQSDSPLWNAI 607
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 113/286 (39%), Gaps = 71/286 (24%)
Query: 366 GEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNC 425
+P + + F K LA+VR+ + L+ ++ ++ + + ++ +RT L +
Sbjct: 743 AKPKRTGSVALFFRKFYNLASVRMLDLCGSLENGYXFKKKIWTIF-EYSIKERTELMKDR 801
Query: 426 HIDQIILCCFYGVAKISQLNL-TFKEIIYNYGKQPQCKPQVFRSVF-------------- 470
H+DQI++C Y + K+ ++ +F EI+ Y QPQ + ++RSV
Sbjct: 802 HLDQILMCAIYVICKLVKMEKNSFTEIMRCYRLQPQAESHIYRSVLIAKTPSGESQKNNE 861
Query: 471 --------------------------------DHVDIITFYNKIFAPTVKPLLVELGPV- 497
D+I FYN ++ P VK + + G V
Sbjct: 862 EIRQKDVSDKETNVAPPTPTNMAGTSQNFGEETRGDLIKFYNTVYVPQVKEMANKFGLVR 921
Query: 498 GTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPL-RTSEMDALISHSSKSY 556
G+ M + S+ P LP P S V S + RT + A+ + +
Sbjct: 922 GSVM------------NLSLSP-LPKGKPPANSPVRRVTSSIMTRTLDPKAISASPAPQL 968
Query: 557 YACVGESTHAYSPFKDLTDINHRLNS---NRRVRGALNFDDVDVDV 599
C + SP KDL IN + S R V L DD DV++
Sbjct: 969 SYCF-----SRSPAKDLEAINKMMISVDPKRSVGKRLLSDDTDVEM 1009
>gi|390353367|ref|XP_792215.3| PREDICTED: retinoblastoma-like protein 1-like [Strongylocentrotus
purpuratus]
Length = 527
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 9/122 (7%)
Query: 86 QRRLE-ALKLNYKVLETMCTAEAQVLHAKNLT-----SLFHRCMLACSAELVLATHKTVT 139
+RRL+ A L YKVLE + AE + L KNLT LFHR + AC E+V+ + +
Sbjct: 289 KRRLKLAENLYYKVLENIMLAEKRRL--KNLTHLLEHELFHRSLFACCLEVVIFAYNS-Q 345
Query: 140 MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 199
F +LE I AF+ KVI+ +R EE L R++ +HLN +EE +L+ W S +++
Sbjct: 346 RTFPWILEAFEIPAFHFYKVIELILRAEEGLSRDIVKHLNFIEEAILQDYAWRSDSPLWD 405
Query: 200 SL 201
L
Sbjct: 406 LL 407
>gi|15010466|gb|AAK77281.1| GH05946p [Drosophila melanogaster]
Length = 722
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 28/231 (12%)
Query: 374 INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILC 433
+ I K+ L +RI + L L ++ ES++ + + ++ T L + H+DQ I+C
Sbjct: 459 LQIFLRKVYLLGWLRIQKLCSELSLCEKTPESIWHIF-EHSITHETELMKDRHLDQNIMC 517
Query: 434 CFYGVAKISQL-NLTFKEIIYNYGKQPQCKPQVFRSVFDHV---------DIITFYNKIF 483
Y ++ ++ + F +I+ Y QPQ V+R VF + DII FYN +
Sbjct: 518 AIYIYIRVKRMEDPKFSDIMRAYRNQPQAVNSVYREVFIDINEDGEPKVKDIIHFYNHTY 577
Query: 484 APTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRTS 543
P ++ +++ V T + R S++ S P PKKV+ +HS++VS + +
Sbjct: 578 VPLMRQFVIDYLNV-TPDVSGRASDLQ----LSPHPKERAAQPKKVTQSHSLFVSQMSKN 632
Query: 544 EMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNRRVRGALNFDD 594
E+ S + Y C SP KDL +N ++ +R+ L+F D
Sbjct: 633 EIQQ--SPNQMVYSFC-------RSPAKDLQAMNEKVRGGKRM---LSFGD 671
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 118 LFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRH---EESLPREL 174
+F+ ++AC ELVL +KT + F VL+ I+AF K+I+ +RH E L R L
Sbjct: 352 IFNITLMACCVELVLEAYKT-ELKFPWVLDCFSISAFEFQKIIEIVVRHGSHEGCLNRSL 410
Query: 175 RRHLNSLEERLLESMVWEKGSSMYNSLTVAR 205
+HLNS+EE LE + W + S+++ + A+
Sbjct: 411 IKHLNSIEETCLERLAWARNSTVWEMIASAQ 441
>gi|194912087|ref|XP_001982431.1| GG12742 [Drosophila erecta]
gi|190648107|gb|EDV45400.1| GG12742 [Drosophila erecta]
Length = 843
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 112/255 (43%), Gaps = 36/255 (14%)
Query: 350 PLPPPLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCL 409
PLP L G + I K+ L +RI + L LS++ E ++ +
Sbjct: 564 PLPTCLMVDMDRSAGA--------LQIFLRKVYLLGWLRIQKLCMELSLSEETHEYIWHI 615
Query: 410 CPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQL-NLTFKEIIYNYGKQPQCKPQVFRS 468
+ ++ T L + H+DQ I+C Y ++ ++ + F +I+ Y QPQ V+R
Sbjct: 616 F-EHSITHETELMKDRHLDQNIMCAIYIYIRVKRMEDPKFSDIMRAYRNQPQAVNSVYRE 674
Query: 469 VFDHV---------DIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFP 519
VF + DII FYN + P ++ ++ V T + R S++ S P
Sbjct: 675 VFIGINADGEPEVKDIIHFYNSTYVPVIRQFAIDYLNV-TPDVSGRISDLQ----LSPHP 729
Query: 520 ALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHR 579
PKKV+ HS++VS + +E+ S + Y C SP KDL +N +
Sbjct: 730 KERAAQPKKVTQNHSLFVSQMSKNEIQQ--SPNQMVYSFC-------RSPAKDLQAMNEK 780
Query: 580 LNSNRRVRGALNFDD 594
+ +R+ L+F D
Sbjct: 781 VRGGKRM---LSFGD 792
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 118 LFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRH---EESLPREL 174
+F+ ++AC ELVL +KT + F VLE I+AF K+I+ +RH E L R L
Sbjct: 473 IFNITLMACCVELVLEAYKT-ELKFPWVLECFSISAFEFQKIIEIVVRHGSHEGCLNRSL 531
Query: 175 RRHLNSLEERLLESMVWEKGSSMYNSLTVAR 205
+HLNS+EE LE M W + S++++ + A+
Sbjct: 532 IKHLNSIEETCLERMAWARNSTVWSMIASAQ 562
>gi|1403032|emb|CAA65661.1| RBF [Drosophila melanogaster]
Length = 797
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 109/231 (47%), Gaps = 28/231 (12%)
Query: 374 INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILC 433
+ I K+ L +RI + L L ++ ES++ + + ++ T L + H+DQ I+C
Sbjct: 582 LQIFLRKVYLLGWLRIQKLCSELSLCEKTPESIWHIF-EHSITHETELMKDRHLDQNIMC 640
Query: 434 CFYGVAKISQL-NLTFKEIIYNYGKQPQCKPQVFRSVFDHV---------DIITFYNKIF 483
Y ++ ++ + F +I+ Y QPQ V+R VF + DII FYN +
Sbjct: 641 AIYIYIRVKRMEDPKFSDIMRAYRNQPQAVNSVYREVFIDINEDGEPKVKDIIHFYNHTY 700
Query: 484 APTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRTS 543
P ++ +++ V T + R S++ S P PKKV+ +HS++VS + +
Sbjct: 701 VPLMRQFVIDYLNV-TPDVSGRASDLQ----LSPHPKERAAQPKKVTQSHSLFVSQMSKN 755
Query: 544 EMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNRRVRGALNFDD 594
E+ + S++ SP KDL +N ++ +R+ L+F D
Sbjct: 756 EIQQSPNQMVYSFFR---------SPAKDLQAMNEKVRGGKRM---LSFGD 794
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 118 LFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRH---EESLPREL 174
+F+ ++AC ELVL +KT + F VL+ I+AF K+I+ +RH E L R L
Sbjct: 475 IFNITLMACCVELVLEAYKT-ELKFPWVLDCFSISAFEFQKIIEIVVRHGSHEGCLNRSL 533
Query: 175 RRHLNSLEERLLESMVWEKGSSMYNSLTVAR 205
+HLNS+EE LE + W + S+++ + A+
Sbjct: 534 IKHLNSIEETCLERLAWARNSTVWEMIASAQ 564
>gi|328791078|ref|XP_395096.4| PREDICTED: retinoblastoma-family protein [Apis mellifera]
Length = 1040
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 76 ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAEL 130
AN + + +R L Y++LE + E + ++T+L F +C+ AC E+
Sbjct: 477 ANETTSDFGRKRLYLGQTLFYRLLEMILNDEKRKKPNYDVTNLLTKEIFIQCLFACCLEI 536
Query: 131 VLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMV 190
V+ ++K+ +F +L + + A+ KVI+ +R E+ L R++ +HLN +EE++LES+
Sbjct: 537 VIYSYKSNDKIFPWILNALNLDAYYFYKVIEIIVRAEDQLSRDVVKHLNQIEEKILESLA 596
Query: 191 WEKGSSMYNSL 201
W+ S ++N++
Sbjct: 597 WQSDSPLWNAI 607
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 115/287 (40%), Gaps = 72/287 (25%)
Query: 366 GEPCAETGINICFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLCPKRTLNQRTSLFFN 424
+P + + F K LA+VR+ + L++ +++ ++ + + ++ +RT L +
Sbjct: 743 AKPKRTGSVALFFRKFYNLASVRMLDLCGSLEIMDIDLKKKIWTIF-EYSIKERTELMKD 801
Query: 425 CHIDQIILCCFYGVAKISQLNL-TFKEIIYNYGKQPQCKPQVFRSVF------------- 470
H+DQI++C Y + K+ ++ +F EI+ Y QPQ + ++RSV
Sbjct: 802 RHLDQILMCAIYVICKLVKMEKNSFTEIMRCYRLQPQAESHIYRSVLIAKTPSGESQKNN 861
Query: 471 ---------------------------------DHVDIITFYNKIFAPTVKPLLVELGPV 497
D+I FYN ++ P VK + + G V
Sbjct: 862 EEIKQKDVSDKETNVAPPTPTNMAGTSQNFGEETRGDLIKFYNTVYVPQVKEMANKFGLV 921
Query: 498 -GTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPL-RTSEMDALISHSSKS 555
G+ M + S+ P LP P S V S + RT + A+ + +
Sbjct: 922 RGSVM------------NLSLSP-LPKGKPPANSPVRRVTSSIMTRTLDPKAISASPAPQ 968
Query: 556 YYACVGESTHAYSPFKDLTDINHRLNS---NRRVRGALNFDDVDVDV 599
C + SP KDL IN + S R V L DD DV++
Sbjct: 969 LSYCF-----SRSPAKDLEAINKMMISVDPKRSVGKRLLSDDTDVEM 1010
>gi|297259874|ref|XP_002798195.1| PREDICTED: retinoblastoma-like protein 1-like [Macaca mulatta]
Length = 1031
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 60/261 (22%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 750 GISRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 808
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------- 470
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V RS+
Sbjct: 809 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHV-RSIMVSSLALEIVARKR 867
Query: 471 ---------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEV 509
+ D+I FYN I+ VK A+K + ++
Sbjct: 868 GSCYLEDATKTPDSSSGPVKEERGDLIKFYNTIYVGRVKSF---------ALKYDLSNQ- 917
Query: 510 NHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGEST 564
+H DA S FP + SP+++S HS+Y+SP + + ++ S Y G
Sbjct: 918 DHVMDAPPLSPFPHIKQQPGSPRRISQQHSIYISPHKNG---SGLTPRSTLLYKFNG--- 971
Query: 565 HAYSPFKDLTDINHRLNSNRR 585
SP K L +IN+ + +
Sbjct: 972 ---SPSKSLKEINNMIRQGEQ 989
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 19/176 (10%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNIWAEQRRLEALKLNYK 97
V+TPV++A + L++I+ L + PS L N M+NI + L+ + +
Sbjct: 383 VITPVASATQSVSRLQSIVAGLKNAPSDQLTNIFESCVRNPMENIM---KILKGMGETFC 439
Query: 98 VLETMCTAEAQVLHAKNLT---------SLFHRCMLACSAELVLATHKTVTMLFLAVLER 148
T T E H +FH ++AC E+VL + + F ++E
Sbjct: 440 QHYTQSTDEQPGSHIGKKRKLKLVLLEQDIFHHSLMACCLEIVLFAYSS-PRTFPWIIEV 498
Query: 149 IGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
+ + F KVI+ IR EE L R++ ++LNS+EE++LES+ W S+++ +L V+
Sbjct: 499 LNLQPFYFYKVIEVVIRSEEGLSRDMVKYLNSIEEQILESLAWSHDSALWEALQVS 554
>gi|185133477|ref|NP_001117728.1| retinoblastoma-associated protein [Oncorhynchus mykiss]
gi|4008032|gb|AAD13390.1| retinoblastoma 1 [Oncorhynchus mykiss]
Length = 910
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 21/143 (14%)
Query: 84 AEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTV 138
+QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+ +AT+
Sbjct: 425 GKQRFTLGIRLYYRVMESMLKSEEKRLSVQNFSKLLNDSTFHTSLLACALEVAMATYGGS 484
Query: 139 T----------------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLE 182
T + F +L+ +TAF+ KVI+SFI+ E SL +++ +HL E
Sbjct: 485 TFKNGGYSNGGVPVETDLCFPWILDVFQLTAFDFYKVIESFIKAEPSLSKDIVKHLERCE 544
Query: 183 ERLLESMVWEKGSSMYNSLTVAR 205
++E++ W + S ++ L R
Sbjct: 545 HLIMETIAWREDSPLFELLKRTR 567
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 102/239 (42%), Gaps = 16/239 (6%)
Query: 352 PPPLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCP 411
PP P+ P +++ + K+ +LA +R+ + +L S E +
Sbjct: 614 PPSSQPSAPAPHQTPRHPKSNSLSLFYKKLYRLAYMRLKMLYTQLLTSHPELEPIMWTLF 673
Query: 412 KRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF- 470
+ TL L + H+DQ+++ Y + K+ ++L FK I+ Y P + F+ V
Sbjct: 674 QHTLQNEYELMRDRHLDQLMMSAMYAICKVKNVDLRFKTIVTAYKNMPNTNQETFKHVLI 733
Query: 471 ---DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNH-NNDASVFPALPDMSP 526
+ II FYN +F +K +++ + + S + H FP SP
Sbjct: 734 REGQYDSIIVFYNLVFMQKLKTNILQYA----SPRPPTLSPIPHIPRSPYKFPN----SP 785
Query: 527 KKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNRR 585
+V +++VY+SP+++ + + +GES F+ IN +NS+ R
Sbjct: 786 LRVPGSNNVYISPMKSPTRMSPVMTPRTRILVSIGESFGTSDKFQ---KINAMVNSSDR 841
>gi|301096798|ref|XP_002897495.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106955|gb|EEY65007.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1063
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 12 ITGAKRKF--DSLASPVKTITSPLSPHHSSTSKMVVTPVSTAMTTAKWLR---TIICPLP 66
+T R+F D P + IT L H S++++ +T TA +R T++
Sbjct: 484 VTPQLRRFFSDCTVDPTQRITRVLREH----SELLLAARTTGRVTAGRVRFTATLMVDEQ 539
Query: 67 SKPSADLQGANL-----MDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL--- 118
+ N+ +D+ + L + L Y+VLE + +E + L + + L
Sbjct: 540 EDTDENESARNISFSSGVDDSLKRTKNL-TIVLFYRVLEPLLQSERERLRTNDFSKLLNN 598
Query: 119 --FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRR 176
F + ACSAE+VL H +T+ + +LE + + AF+ +SF+++ LP L++
Sbjct: 599 DVFLAALFACSAEVVLKAHSLITISYPFLLEHLHVNAFHFVTTSESFVKYAPKLPSALKK 658
Query: 177 HLNSLEERLLESMVWEKGSSMYNSLT 202
H+ ++ R+L+S VW+ S++Y L+
Sbjct: 659 HMGDVKNRILDSAVWKSDSALYQLLS 684
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 18/138 (13%)
Query: 374 INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILC 433
+ + + K+ AA RI + L L + ++ K + L + H+D I+LC
Sbjct: 716 LRLFYRKVLSRAASRIYQLCNLLGLDSTDQNQIWTAV-KECITSHQYLLKDRHLDLIVLC 774
Query: 434 CFYGVAKISQ--------LNLTFKEIIYNYGKQPQCKPQVFRSVFDHV---------DII 476
Y V K+S+ ++FK ++ Y + + P V D + +II
Sbjct: 775 NIYAVCKVSRGPNISQAAATMSFKRLLTCYKQLNRQTPGNGEGVIDGILLEDEKSRGNII 834
Query: 477 TFYNKIFAPTVKPLLVEL 494
FYN+ + +K +++
Sbjct: 835 KFYNRCYITPMKVFILQF 852
>gi|24638969|ref|NP_525036.2| Retinoblastoma-family protein [Drosophila melanogaster]
gi|85702751|sp|Q24472.2|RBF_DROME RecName: Full=Retinoblastoma family protein
gi|3702398|emb|CAA20903.1| EG:34F3.3 [Drosophila melanogaster]
gi|7290085|gb|AAF45551.1| Retinoblastoma-family protein [Drosophila melanogaster]
gi|19528311|gb|AAL90270.1| LD02906p [Drosophila melanogaster]
Length = 845
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 28/231 (12%)
Query: 374 INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILC 433
+ I K+ L +RI + L L ++ ES++ + + ++ T L + H+DQ I+C
Sbjct: 582 LQIFLRKVYLLGWLRIQKLCSELSLCEKTPESIWHIF-EHSITHETELMKDRHLDQNIMC 640
Query: 434 CFYGVAKISQL-NLTFKEIIYNYGKQPQCKPQVFRSVFDHV---------DIITFYNKIF 483
Y ++ ++ + F +I+ Y QPQ V+R VF + DII FYN +
Sbjct: 641 AIYIYIRVKRMEDPKFSDIMRAYRNQPQAVNSVYREVFIDINEDGEPKVKDIIHFYNHTY 700
Query: 484 APTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRTS 543
P ++ +++ V T + R S++ S P PKKV+ +HS++VS + +
Sbjct: 701 VPLMRQFVIDYLNV-TPDVSGRASDLQ----LSPHPKERAAQPKKVTQSHSLFVSQMSKN 755
Query: 544 EMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNRRVRGALNFDD 594
E+ S + Y C SP KDL +N ++ +R+ L+F D
Sbjct: 756 EIQQ--SPNQMVYSFC-------RSPAKDLQAMNEKVRGGKRM---LSFGD 794
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 118 LFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRH---EESLPREL 174
+F+ ++AC ELVL +KT + F VL+ I+AF K+I+ +RH E L R L
Sbjct: 475 IFNITLMACCVELVLEAYKT-ELKFPWVLDCFSISAFEFQKIIEIVVRHGSHEGCLNRSL 533
Query: 175 RRHLNSLEERLLESMVWEKGSSMYNSLTVAR 205
+HLNS+EE LE + W + S+++ + A+
Sbjct: 534 IKHLNSIEETCLERLAWARNSTVWEMIASAQ 564
>gi|156399369|ref|XP_001638474.1| predicted protein [Nematostella vectensis]
gi|156225595|gb|EDO46411.1| predicted protein [Nematostella vectensis]
Length = 1083
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 110/216 (50%), Gaps = 24/216 (11%)
Query: 12 ITGAK--RKFDSLASPVKTITSPLSPHHSSTSKMVVTPVSTAMTTAKW-----LRTIICP 64
+TG + ++ D +PV T T +S + S + TP +T K L++II
Sbjct: 371 LTGRRYLKEKDPCITPVSTATQSVSRLQAMCSGLKPTPSERLLTIFKECSRDPLQSIIDR 430
Query: 65 LPS----------KPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAK- 113
+ + +PSA+ + +A +R A L YKVLE + +E + L
Sbjct: 431 VENLGEIFLKEYVQPSAERPNSPCSTREFALRRLKLAEILYYKVLENITLSEKRRLQGHL 490
Query: 114 NLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEE 168
+LT+L FHR +LAC E+V+ ++ + F V+ +G+ + KVI+S I+ E+
Sbjct: 491 DLTTLLEQDVFHRSLLACCLEIVIFSYNS-QRTFPWVISILGLAPYYFYKVIESLIKAED 549
Query: 169 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
L R++ +HLN +EE++LES+ W S ++ ++ A
Sbjct: 550 GLSRDVVKHLNHIEEQVLESLAWSGDSPLWMTIEQA 585
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 366 GEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNC 425
+P + + F K+ +A+VR+ + RL +++++R ++ C + +L + +
Sbjct: 783 AKPKKTGSLALFFRKVYHMASVRLRDLCARLDVNEELRGKMWT-CFEHSLMHLPEIAKDR 841
Query: 426 HIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
H+DQI++CC Y + K++ L+F+ I+ Y QPQ V+RSV
Sbjct: 842 HLDQILMCCVYVMGKVTNSELSFQNIMKCYRTQPQAASHVYRSVM 886
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 21/125 (16%)
Query: 474 DIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDM--SPKK-VS 530
D+I FYNK+F T+K A+K + + S P + + SP++ VS
Sbjct: 946 DLIEFYNKVFIKTIKNF---------ALKFSSSDRSLESPPLSPLPIVRNQGHSPRRQVS 996
Query: 531 ATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNRRVRGAL 590
A H VY+SP + ++ +++ Y C ES P K+L DINH L + AL
Sbjct: 997 ARHPVYISPHKNG---VPMTPTTRMLY-CFSES-----PAKNLRDINHMLRQGENRKRAL 1047
Query: 591 NFDDV 595
DD+
Sbjct: 1048 LQDDI 1052
>gi|348679406|gb|EGZ19222.1| hypothetical protein PHYSODRAFT_354183 [Phytophthora sojae]
Length = 1073
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 6/122 (4%)
Query: 94 LNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLER 148
L Y+VLE + +E + L + + L F + ACSAE+VL H +T+ + +L+
Sbjct: 595 LFYRVLEPLLVSERERLRNNDFSKLLNNEVFLAALFACSAEVVLKAHSLITISYPFLLDH 654
Query: 149 IGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLT-VARPA 207
+ + AF+ +SF+++ LP L++H+ ++ R+L+S+VW S++Y L V RP
Sbjct: 655 LRVNAFHFVTTSESFVKYAPKLPAALKKHMGDVKNRILDSLVWRSDSALYQLLAGVRRPP 714
Query: 208 LS 209
S
Sbjct: 715 TS 716
>gi|196012646|ref|XP_002116185.1| hypothetical protein TRIADDRAFT_60210 [Trichoplax adhaerens]
gi|190581140|gb|EDV21218.1| hypothetical protein TRIADDRAFT_60210 [Trichoplax adhaerens]
Length = 820
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 15/133 (11%)
Query: 91 ALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKT-------- 137
A +L ++VLE M E + L + + L FH +LACS E+VL T+ +
Sbjct: 399 AKRLYFRVLENMLKGEQRRLGNSDFSVLLNHDVFHSSLLACSLEVVLFTYNSPHTSNSNK 458
Query: 138 --VTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGS 195
F +L+ + I A++ KVI+SFIR E SL L +HLN +E +LES+ W+ S
Sbjct: 459 YGYEFSFPWILDILDIKAYHFGKVIESFIRSELSLDNNLVQHLNFIESMILESLAWQASS 518
Query: 196 SMYNSLTVARPAL 208
+Y +L ++ L
Sbjct: 519 PLYAALESSKIDL 531
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 155/382 (40%), Gaps = 89/382 (23%)
Query: 238 PPTDSPTRQHYE-NLPWWKE-------PFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSP 289
P T + + YE + PW + F +V F+ + + + H+NF +
Sbjct: 451 PHTSNSNKYGYEFSFPWILDILDIKAYHFGKVIESFIRSELSLDNNLVQHLNFIESMI-- 508
Query: 290 VHSLHKHETSPVCSIFNFQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSK 349
+ SL +SP+ + Y +LVT++ V SL++ CL
Sbjct: 509 LESLAWQASSPLYAALESSKIDLRYRQLVTENKTEVA------GSLLETCL--------- 553
Query: 350 PLPPPLYPTRSNPGGGGEPCAET------GINICFCKINKLAAVRINAMVERLQLSQQIR 403
P + + + C + +++ + K+ +LA +R+ + + L++ ++
Sbjct: 554 ------SPVKKSHTSEKQSCGDETQKKLHSVDLFYRKVFQLAYLRLKNLCDALKIDEKTI 607
Query: 404 ESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKP 463
+ C L +T LF + HIDQ+ C V +S YG
Sbjct: 608 NRTWT-CYHYALTYKTKLFMDRHIDQV---C-RNVLLLSN----------QYGT------ 646
Query: 464 QVFRSVFDHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPD 523
II FYN+IF +K +++L V A++ + N + S D
Sbjct: 647 -----------IIAFYNQIFICEMKEFVLKLSSVNAALQLSPIPTYNSRSPRS------D 689
Query: 524 MSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHR--LN 581
K++ +VY+SPL+ + +++ SK+ Y C G++ + ++ +I H+ +
Sbjct: 690 GVGKRIPWVSNVYLSPLKRKD---ILTPRSKALY-CFGDALESSRKLSEINEIVHKGSMK 745
Query: 582 SNRRVRGALNFDD----VDVDV 599
S++R L FDD DVDV
Sbjct: 746 SSKR----LKFDDTTVTADVDV 763
>gi|1045520|gb|AAB48991.1| retinoblastoma-related protein pRb2/p130 [Mus musculus]
Length = 1125
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 29/185 (15%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG---ANLMDNIWAEQRRLEAL--------- 92
VTPVSTA + L T++ L + PS L+ + D A RL+ +
Sbjct: 413 VTPVSTAAHSLSRLHTMLSGLRNAPSEKLERILRSCSRDPTQAIADRLKEMYEIYSQHFQ 472
Query: 93 -----------KLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHK 136
L YKVLE++ E + L +L+ + FHR +LAC E+V +HK
Sbjct: 473 PDENFSNCAKEMLYYKVLESVIEQEQKRLGDMDLSGVLEHDAFHRSLLACCLEVVAFSHK 532
Query: 137 TVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSS 196
F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++L+ + W+ S
Sbjct: 533 PPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLAWKTKSP 591
Query: 197 MYNSL 201
+++ +
Sbjct: 592 LWDRI 596
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 74/132 (56%), Gaps = 13/132 (9%)
Query: 351 LPPPLYPTRSNPGGG----GEPCAETGIN--------ICFCKINKLAAVRINAMVERLQL 398
+P P+ + +PGG G+P + I + F K+ LA VR+ + +L +
Sbjct: 787 VPGPVAIQQISPGGQQQNPGQPLTSSSIRPRKTSSLALFFRKVYYLAGVRLRDLCIKLDI 846
Query: 399 SQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQ 458
S ++R+ ++ C + ++ Q T L + H+DQ+++C Y +AK+++ + +F+ I+ Y Q
Sbjct: 847 SDELRKKIWT-CFEFSIIQCTELMMDRHLDQLLMCAIYVMAKVTKEDRSFQNIMRCYRTQ 905
Query: 459 PQCKPQVFRSVF 470
PQ + QV+RSV
Sbjct: 906 PQARSQVYRSVL 917
>gi|148225699|ref|NP_001091542.1| retinoblastoma-like protein 2 [Bos taurus]
gi|146186627|gb|AAI40609.1| RBL2 protein [Bos taurus]
gi|296477992|tpg|DAA20107.1| TPA: retinoblastoma-like 2 (p130) [Bos taurus]
Length = 1140
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 42/213 (19%)
Query: 29 ITSPLSP-HHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSADLQ------------- 74
+++PL+ + S VTPVSTA + L T++ L + PS L+
Sbjct: 399 VSTPLTGVRYIKDSSPCVTPVSTATHSLSRLHTMLTGLRNAPSERLEQTLRSCSRDPTQA 458
Query: 75 ---------------------GANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAK 113
G+N +I ++ R + L YKVLE++ E + L
Sbjct: 459 IANRLKEMYEIYSQHFQSEEDGSNCAKDIASKHFRFAEM-LYYKVLESVIEQEQKRLGDM 517
Query: 114 NLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEE 168
+L+ + FHR +LAC E+V ++K F + E + ++ KVI+ FIR E+
Sbjct: 518 DLSGILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAED 576
Query: 169 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
L RE+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 577 GLCREVVKHLNQIEEQILDHLAWKPESPLWDRI 609
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 830 PRKTSSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 888
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 889 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 931
>gi|327276415|ref|XP_003222965.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 2-like
[Anolis carolinensis]
Length = 1116
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 69/113 (61%), Gaps = 6/113 (5%)
Query: 94 LNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLER 148
L YKVLE++ E + L +L+++ FHR ++AC E+++ ++K F + +
Sbjct: 492 LYYKVLESVIEQEKKRLGDVDLSAILEHDVFHRSLMACCLEIIIYSYKAADS-FPFITDI 550
Query: 149 IGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
+ AF+ KVI+ IR E+ L RE+ +HLN +EE++LES+ W++ S ++ +
Sbjct: 551 FDVPAFHFYKVIEILIRAEDGLCREVVKHLNHIEEQILESLAWKEESPLWEKI 603
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 70/121 (57%), Gaps = 2/121 (1%)
Query: 351 LPPPLYPTRSNPGGGGEPCAETG-INICFCKINKLAAVRINAMVERLQLSQQIRESVYCL 409
+P P + G G +TG + + F K+ LA+VR+ + +L +S ++R+ ++
Sbjct: 804 IPVPGEQRQKPQAGSGIKSRKTGSLMLFFRKVFHLASVRLRDLCLKLDISDELRKKIWT- 862
Query: 410 CPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV 469
C + +L Q + L + H+DQ+++C Y ++K+++ + +F+ I+ Y QPQ K V+RSV
Sbjct: 863 CFEFSLVQCSDLMMDRHLDQLLMCAIYIISKVTKEDTSFQNIMRFYRTQPQAKSHVYRSV 922
Query: 470 F 470
Sbjct: 923 L 923
>gi|357631172|gb|EHJ78820.1| putative retinoblastoma-like protein 1 isoform a [Danaus plexippus]
Length = 961
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 163/413 (39%), Gaps = 114/413 (27%)
Query: 96 YKVLETMCTAEAQVLHA---KNLTSL------FHRCMLACSAELVLATHKTVTMLFLAVL 146
YK++E + A Q L K+L ++ F + AC E+VL + ++ F VL
Sbjct: 521 YKIIELVVQAVVQKLSRDVIKHLNAILLSQETFQLTVYACCTEVVLHAYGVHSLRFPRVL 580
Query: 147 ERIGITAFNLSKVIQSFIRHE-ESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 205
+ G++AF+ K+I+ ++ + L R++ +HLN++EE++LES+VW S +++ L+
Sbjct: 581 QIYGLSAFHFYKIIELVVQAVVQKLSRDVIKHLNAVEEQVLESLVWTSDSPLWDQLS-KN 639
Query: 206 PALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEPFTEVDSIF 265
P +A + V DSP R++
Sbjct: 640 PIPAA------------------------IEVYAQDSPNRRN------------------ 657
Query: 266 LLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELVTDDYRSV 325
+SG SP+ + +P+ Q + + +S+
Sbjct: 658 -----------------ASGLQSPISAAIDRYLTPMADQAKKQLFKD-----NIKPGQSL 695
Query: 326 LVERNNFTSLVKDCLLGLNNLKSKPLPPPLYPTRSNPGGGGEPCAETGINICFCKINKLA 385
LV+ NN N+K +P P+ T A + + F K LA
Sbjct: 696 LVQTNN-------------NVKQEPQQVPIVSTAETTPNTTPKKANNSLILFFRKFYSLA 742
Query: 386 AVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLN 445
+R+N + RL+L+ + C + ++ +T L + + Q+
Sbjct: 743 VIRMNDLCTRLKLTDDELKRKIWTCVEHSVMNQTQLMRDSN----------------QVE 786
Query: 446 LTFKEIIYNYGKQPQCKPQVFRSVF----------DHVDIITFYNKIFAPTVK 488
TF +I+ Y ++P V+RSV + D+I FYNK++ ++
Sbjct: 787 RTFADIMRCYRQRPLADNHVYRSVLINKGNDEESPERGDLINFYNKVYVKCMQ 839
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 81/218 (37%), Gaps = 56/218 (25%)
Query: 344 NNLKSKPLPPPLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIR 403
NN+K +P P+ T A + + F K LA +R+N + RL+L+
Sbjct: 701 NNVKQEPQQVPIVSTAETTPNTTPKKANNSLILFFRKFYSLAVIRMNDLCTRLKLTDDEL 760
Query: 404 ESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKP 463
+ C + ++ +T L + + Q+ TF +I+ Y ++P
Sbjct: 761 KRKIWTCVEHSVMNQTQLMRDSN----------------QVERTFADIMRCYRQRPLADN 804
Query: 464 QVFRSVF----------DHVDIITFYNKIFAPTVKPLLVELG------------PVGTAM 501
V+RSV + D+I FYNK++ ++ + P G A
Sbjct: 805 HVYRSVLINKGNDEESPERGDLINFYNKVYVKCMQNFALRFTGKHKDGCSLSPLPAGRAG 864
Query: 502 KTNRDSEVNHNNDASVFPALPDMSP--KKVSATHSVYV 537
++ R SP ++VS H +YV
Sbjct: 865 RSGRSG----------------WSPGGQRVSERHQLYV 886
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 94 LNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLER 148
L YKV E + T E + +L L F + AC E+VL + ++ F VL+
Sbjct: 453 LYYKVFEHIITEEHRKKPQLSLQILLSQETFQLTVYACCTEVVLHAYGVHSLRFPRVLQI 512
Query: 149 IGITAFNLSKVIQSFIRH-EESLPRELRRHLNSL 181
G++AF+ K+I+ ++ + L R++ +HLN++
Sbjct: 513 YGLSAFHFYKIIELVVQAVVQKLSRDVIKHLNAI 546
>gi|383857279|ref|XP_003704132.1| PREDICTED: retinoblastoma-like protein 1 [Megachile rotundata]
Length = 1039
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
Query: 76 ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAEL 130
AN + + ++R L Y++LE + E + ++T+L F +C+ AC E+
Sbjct: 477 ANETTSDFGKKRLYLGQTLFYRLLEKIVNDEKRKKPNYDVTNLLMNEVFIQCLFACCLEI 536
Query: 131 VLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMV 190
V+ ++K+ +F +L + + A+ KVI+ +R E+ L R++ +HLN +EE++LES+
Sbjct: 537 VIYSYKSNDKIFPWILNALNLDAYYFYKVIEIIVRAEDQLSRDVVKHLNQIEEKILESLA 596
Query: 191 WEKGSSMYNSL 201
W+ S +++++
Sbjct: 597 WKSDSPLWSAI 607
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 113/286 (39%), Gaps = 70/286 (24%)
Query: 366 GEPCAETGINICFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLCPKRTLNQRTSLFFN 424
P + + F K LA+VR+ + L++ +++ ++ + + ++ RT L +
Sbjct: 742 ARPKRTGSVALFFRKFYNLASVRMLDLCGSLEIMDIDLKKKIWTIF-EYSIKDRTELMKD 800
Query: 425 CHIDQIILCCFYGVAKISQLNL-TFKEIIYNYGKQPQCKPQVFRSVF------------- 470
H+DQI++C Y + K++++ +F EI+ Y QPQ + ++RSV
Sbjct: 801 RHLDQILMCAIYVICKLAKMEKNSFTEIMRCYRLQPQAESHIYRSVLIAKTPSDESQKAS 860
Query: 471 ---------------------------------DHVDIITFYNKIFAPTVKPLLVELGPV 497
D+I FYN ++ P VK + +LG
Sbjct: 861 EESGQKDVTDKEPNVAPPTPTNMAGTSQNFGEETRGDLIKFYNTVYVPQVKEVANKLGLA 920
Query: 498 GTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPL-RTSEMDALISHSSKSY 556
++ + S+ P LP P S V S + RT + A+ + +
Sbjct: 921 RGSVTS-----------LSLSP-LPKGKPPTSSPVRRVTSSIMTRTLDPKAISASPAPQL 968
Query: 557 YACVGESTHAYSPFKDLTDINHRLNS---NRRVRGALNFDDVDVDV 599
C + SP KDL IN + S R V L DD DV++
Sbjct: 969 SYCF-----SRSPAKDLEAINKMMISVDPKRSVGKRLLSDDTDVEM 1009
>gi|417405972|gb|JAA49670.1| Putative rb retinoblastoma tumor suppressor-related protein
[Desmodus rotundus]
Length = 1139
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 42/225 (18%)
Query: 16 KRKFDSLASPVKTITSPLSPHHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSADLQ- 74
++ FD A ++ T+ H+ + VTPVS A + L ++ L S P LQ
Sbjct: 388 QQHFDK-AKALRISTALTGGRHTKDNSPCVTPVSAATHSRGRLHNMLVGLRSAPGEKLQQ 446
Query: 75 ---------------------------------GANLMDNIWAEQRRLEALKLNYKVLET 101
+N + + Q R+ + L YKVLET
Sbjct: 447 ILRTCSRDPTQAIANRLKEMSEIYCQHSQADEGSSNCAKEVASRQFRIAEM-LYYKVLET 505
Query: 102 MCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNL 156
+ E + L +L+++ FHR ++AC E+V ++K F + E + ++
Sbjct: 506 VTEQEQKRLGDMDLSNILEQDAFHRSLVACCLEVVTFSYKPPGN-FPFITEVFDVPFYHF 564
Query: 157 SKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
KVI+ FIR E+ L RE+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 565 YKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLAWKSESPLWDRI 609
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 380 KINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVA 439
K+ LA VR+ + +L +S +R+ ++ C + ++ Q L + H+DQ+++C Y +A
Sbjct: 842 KVYHLAGVRLRDLCVKLDISDNLRKKIWT-CFEFSIVQCPELMMDRHLDQLLMCAIYVMA 900
Query: 440 KISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
K+++ + +F+ I+ Y QPQ + Q++RSV
Sbjct: 901 KVTKDDKSFQNIMRCYRTQPQARSQIYRSVL 931
>gi|195162391|ref|XP_002022039.1| GL14434 [Drosophila persimilis]
gi|198467719|ref|XP_001354481.2| GA20332 [Drosophila pseudoobscura pseudoobscura]
gi|194103937|gb|EDW25980.1| GL14434 [Drosophila persimilis]
gi|198149378|gb|EAL31534.2| GA20332 [Drosophila pseudoobscura pseudoobscura]
Length = 833
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 114/259 (44%), Gaps = 39/259 (15%)
Query: 349 KPLPPPLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYC 408
KPLP Y + G + I K+ L +RI + L L + E ++
Sbjct: 565 KPLPTH-YDVNCDRTAGA-------LQIFLRKVYLLGWLRIQKLCSELILIDKAPERIWH 616
Query: 409 LCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQL-NLTFKEIIYNYGKQPQCKPQVFR 467
+ + ++ Q+T L + H+DQII+C Y ++S+L + F +I+ Y QPQ V+R
Sbjct: 617 IF-EHSITQKTDLMKDRHLDQIIMCAIYIYIRVSKLEDPKFSDIMRAYRNQPQAVNSVYR 675
Query: 468 SV-FDH--------VDIITFYNKIFAPTVKPLLVE---LGPVGTAMKTNRDSEVNHNNDA 515
V FD DII FYN + P +K ++ + P T K +
Sbjct: 676 EVLFDLNDDGQPKVTDIIYFYNHKYVPLMKQFAIDYLNMTPDVTGCKIKAADLL-----L 730
Query: 516 SVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTD 575
S P+ PKKV+ HS+YV+ + +E+ + +Y SP KDL
Sbjct: 731 SPHPSERAAQPKKVTQNHSLYVTQMPKNEIQQSPNQMVYEFYR---------SPAKDLQL 781
Query: 576 INHRLNSNRRVRGALNFDD 594
+N ++ +R+ L+F D
Sbjct: 782 MNEKVRGGKRM---LSFGD 797
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 117 SLFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRH---EESLPRE 173
+F+ ++AC ELVL +KT + F VLE I+AF K+I+ +RH E L R
Sbjct: 474 DIFNITLMACCVELVLEAYKT-ELKFPWVLECFSISAFEFQKIIEIVVRHGSHEGCLNRY 532
Query: 174 LRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
L +HLNS+EE LE + W S +++ + A
Sbjct: 533 LIKHLNSIEETCLERLAWASNSPVWDMIATA 563
>gi|13346592|gb|AAG21826.1| retinoblastoma [Oryzias latipes]
Length = 910
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 98/217 (45%), Gaps = 51/217 (23%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADL------------QGANLMDN------------ 81
TP+ AM + K LR + +PS++L QG ++
Sbjct: 355 TPIRAAMNSIKMLRGDLPSSGDQPSSNLEIYFKNCTVDPTQGIQSLEMLGLFSQKFGEAV 414
Query: 82 -----IWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELV 131
++ +R ++L YKV+E M ++ + L +N + L FH +LAC+ E+V
Sbjct: 415 GPHCIVYGRERFTLGVRLYYKVMEAMLESKKKRLFVQNFSKLLNDSTFHMSLLACALEVV 474
Query: 132 LATHKTVT-----------------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPREL 174
+ T++ + + F +L+ ++AF+ KVI+SFI+ E +L +++
Sbjct: 475 MVTYEESSFKNRGCSHGEGDQAVRDLCFPWILDVFDLSAFDFYKVIESFIKAEPTLSKDI 534
Query: 175 RRHLNSLEERLLESMVWEKGSSMYNSLTVARPALSAE 211
+HL + E ++E + W GS ++ L A + E
Sbjct: 535 IKHLETCENLIMEKIAWRTGSPLFELLKREHEAGATE 571
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 14/234 (5%)
Query: 357 PTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLN 416
PT G +++ + K+ +LA R+ + L + E V + TL
Sbjct: 620 PTPQAAGQAPRQPKSNSLSLFYKKLYRLAYTRLKTLCSCLLSNHPDLEHVIWTLFQHTLQ 679
Query: 417 QRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DH 472
L + H+DQ+++ Y + K+ ++L FK I+ Y P + F+ V +
Sbjct: 680 YEYDLMRDRHLDQLMMSAMYAICKVKSVDLRFKLIVSAYKNMPNTSQETFKHVLITEGQY 739
Query: 473 VDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSAT 532
II FYN++F +K +++ + R ++ P SP +V +
Sbjct: 740 DSIIVFYNQVFMQKLKTNILQYA-------STRPPTLSPIPQIPCSPYKFPNSPLRVPGS 792
Query: 533 HSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNRRV 586
++VY+SPL+ S + A + +GES + F+ IN +NS R
Sbjct: 793 NNVYISPLKNSRLSAGMMAPRSRMLVSIGESFGFANRFQ---KINQMVNSGDRA 843
>gi|452823564|gb|EME30573.1| retinoblastoma-associated protein [Galdieria sulphuraria]
Length = 884
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 43/203 (21%)
Query: 36 HHSSTSKMVVTPVSTAMTTAKWLRTIICPLPS----------------KPSADLQGANLM 79
+ ++K+ ++ +++++T KWLR I P K DL G N
Sbjct: 350 YFGDSTKLDISAITSSLTATKWLRDITRMRPEVSFEQKEDDIESSTNLKRFCDLCGLNTY 409
Query: 80 DNI----------------W-----AEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL 118
+N+ W E+R+ E + L VLE + E + LH +N SL
Sbjct: 410 NNVIDTAFNIVFSFFKKNPWYGNEILEERKKEIIGLYLHVLEKVLLTEERRLHRQNFGSL 469
Query: 119 F-----HRCMLACSAELVLATHKTVT-MLFLAVLERIGITAFNLSKVIQSFIRHEESLPR 172
HR ++ACS LA + LF++VL + I+ F +K I SF+ E +PR
Sbjct: 470 LANEYLHRSLIACSIVASLACYGCQDRYLFISVLRGVDISPFEYTKSIGSFVTSIEDIPR 529
Query: 173 ELRRHLNSLEERLLESMVWEKGS 195
+++ L +EE +ES+ W+ S
Sbjct: 530 SVQKFLVKIEEISVESICWQDSS 552
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 18/185 (9%)
Query: 376 ICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCF 435
+ F K+ ++A ++ R+++S E V+ + L + +L N H+D I++C
Sbjct: 596 VFFRKLLRIAREKVRDFCLRMEVSDVFEELVF-ITVNYALTRHFNLLVNRHVDVIVMCAL 654
Query: 436 YGVAKISQLNLTFKEIIYNYGKQPQCKP-----------QVFRSVFDHVDIITFYNKIFA 484
Y V+KI++ L F +I Y Q K +V+ + DII FYN+ F
Sbjct: 655 YAVSKITKEQLKFNDIAAFYRDIFQRKANHLFDIEENLSRVYLEGHHYGDIIEFYNRDFI 714
Query: 485 PTVKPLLVE--LGPVGTAMKTNRD-SEVNHNNDASVFPALPDMSPKKVSATHSVYVSP-- 539
+ L+E MK D +E N ++ +L + + S + SV+ +P
Sbjct: 715 KHFRNFLLEHLKAIFEERMKARSDKNEKNQGEPSTPVRSLHSKTGQSPSGSDSVFYTPSP 774
Query: 540 -LRTS 543
+RTS
Sbjct: 775 SVRTS 779
>gi|351708560|gb|EHB11479.1| Retinoblastoma-like protein 2 [Heterocephalus glaber]
Length = 1141
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 42/225 (18%)
Query: 16 KRKFDSLASPVKTITSPLSP-HHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSADLQ 74
++ FD S TI++PLS + + VTPVST + L T++ L + PS L+
Sbjct: 390 QQHFDK--SKALTISTPLSGVRYIKENSPCVTPVSTTTHSLSRLHTMLTGLRNAPSEKLE 447
Query: 75 G-------------ANLMDNIW--------------------AEQRRLEALKLNYKVLET 101
AN + ++ A + A L YKVLE+
Sbjct: 448 QILRTCSRDPSQAIANRLKEMYEIYSQHSQPDEEFNNCAKEIASKHFRFAEILYYKVLES 507
Query: 102 MCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNL 156
+ E + L A +L+ + FHR +LAC E++ ++K F + E + ++
Sbjct: 508 IIEQEQRRLGATDLSGILEQDAFHRSLLACCLEVITFSYKPPGN-FPFITEIFDVPLYHF 566
Query: 157 SKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
KVI+ FIR E+ L RE+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 567 YKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWDKI 611
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q +
Sbjct: 827 GSIRPKMTSSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWT-CFEFSMIQCPEIMM 885
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
+ H+DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 886 DRHLDQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 932
>gi|195469581|ref|XP_002099715.1| GE16567 [Drosophila yakuba]
gi|194187239|gb|EDX00823.1| GE16567 [Drosophila yakuba]
Length = 635
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 34/259 (13%)
Query: 346 LKSKPLPPPLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRES 405
+ S PLP P + + G + I K+ L +RI + L L ++ E
Sbjct: 343 IASFPLPLPTWLRVNLDRSAG------ALQIFLRKVYLLGWLRIQKLCSELSLCEKTPEC 396
Query: 406 VYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQL-NLTFKEIIYNYGKQPQCKPQ 464
++ + + ++ T L + H+DQ I+C Y ++ ++ + F +I+ Y QPQ
Sbjct: 397 IWHIF-EHSITHETDLMKDRHLDQNIMCAIYIYIRVKRMEDPKFSDIMRAYRNQPQAVNS 455
Query: 465 VFRSVF---------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA 515
V+R VF DII FYN + P ++ ++ V T + R S++
Sbjct: 456 VYREVFIGDNEDGEPKVKDIIHFYNNTYVPVIRQFAIDYLNV-TPDVSGRISDLQ----L 510
Query: 516 SVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTD 575
S P PKKV+ +HS++VS + +E+ S + Y C SP KDL
Sbjct: 511 SPHPKERTAQPKKVTQSHSLFVSQMPKNEIQQ--SPNQMVYSFC-------RSPAKDLQA 561
Query: 576 INHRLNSNRRVRGALNFDD 594
+N ++ +R+ L+F D
Sbjct: 562 MNEKVRGGKRM---LSFGD 577
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Query: 117 SLFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRH---EESLPRE 173
+F+ ++AC ELVL +KT + F VL+ I+AF K+I+ +RH E L R
Sbjct: 257 DIFNITLMACCVELVLEAYKT-ELKFPWVLDCFSISAFEFQKIIEIVVRHGSHEGCLNRS 315
Query: 174 LRRHLNSLEERLLESMVWEKGSSMYNSL 201
L +HLNS+EE LE + W + S++++ +
Sbjct: 316 LIKHLNSIEETCLERLAWARNSTVWDMI 343
>gi|281209031|gb|EFA83206.1| Rb-like protein [Polysphondylium pallidum PN500]
Length = 956
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 84/161 (52%), Gaps = 12/161 (7%)
Query: 46 TPVSTAMTTAKWLRTI-----ICPLPSKPSADLQGANLMDNIWAEQRRLEALKL---NYK 97
TPVS +T W++ I S+ + G N D++ + + L N
Sbjct: 404 TPVSATVTMVSWIKQTVGNNDIIDSVSQLIKECCGPNAQDSLDMIAKLVSELTDGIDNLY 463
Query: 98 VLETMCTAEAQVLHAKNLTSLFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLS 157
+ + + T++ Q + LT FHR +LA S E+V +HK ++LF ++ G+ F+
Sbjct: 464 LSDELITSDEQAI----LTKQFHRSLLATSFEMVAYSHKLDSLLFPHFVKLFGLHPFSYY 519
Query: 158 KVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY 198
++I S ++ ++S+P L HL S+EER++E W +GS+++
Sbjct: 520 RIIDSIVKIDDSMPHLLVTHLLSIEERIVEQYAWTEGSTVF 560
>gi|348583631|ref|XP_003477576.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 2-like
[Cavia porcellus]
Length = 1142
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 78/136 (57%), Gaps = 7/136 (5%)
Query: 71 ADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+D + +N + I ++ R + L YKVLE++ E + L A +L+ + FHR +LA
Sbjct: 480 SDEEFSNGSNEISSKHFRFAEM-LYYKVLESIIEQEQRRLGATDLSGILEQDAFHRSLLA 538
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E++ ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 539 CCLEVITFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 597
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S +++ +
Sbjct: 598 LDHLAWKPESPLWDKI 613
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 832 PKTTSSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWT-CFEFSMIQCPELMMDRHL 890
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 891 DQLLMCAIYVMAKVTKEDRSFQNIMRCYRTQPQARSQVYRSVL 933
>gi|426375443|ref|XP_004054548.1| PREDICTED: retinoblastoma-associated protein-like, partial [Gorilla
gorilla gorilla]
Length = 325
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + ERL E + + TL L + H
Sbjct: 78 KPLKSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRH 137
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 138 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSV 197
Query: 483 FAPTVK 488
F +K
Sbjct: 198 FMQRLK 203
>gi|170571751|ref|XP_001891849.1| Retinoblastoma-associated protein A domain containing protein
[Brugia malayi]
gi|158603413|gb|EDP39348.1| Retinoblastoma-associated protein A domain containing protein
[Brugia malayi]
Length = 924
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 385 AAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQL 444
A VR+ + ER++L ++ R+ + L + L TSL H+DQ ++CC Y VAKI Q
Sbjct: 671 APVRLRDLCERVRLDEKGRQRAWTLF-EHVLRTETSLMAGRHLDQNLMCCLYVVAKIGQQ 729
Query: 445 NLTFKEIIYNYGKQPQCKPQVFRSVF 470
N++F +I+Y+Y QPQ +V+R V
Sbjct: 730 NISFHDIMYHYRHQPQATSRVYRRVL 755
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 110 LHAKNLTSLFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEES 169
L A L F + + C+ +LVL T+++V F LE + + A + KVI+ IR + S
Sbjct: 501 LSAVLLREDFLKALYVCALQLVLFTYESVRE-FPWSLEIMRLPAIHFYKVIELIIRADSS 559
Query: 170 LPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
L RE+ +HLN +EER+LE W S ++ SL
Sbjct: 560 LSREMVKHLNKVEERVLEEFAWSLDSPLWPSL 591
>gi|344289259|ref|XP_003416362.1| PREDICTED: retinoblastoma-like protein 2 [Loxodonta africana]
Length = 1139
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 42/225 (18%)
Query: 16 KRKFD-SLASPVKTITSPLSPHHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSADLQ 74
++ FD S A V T S + P S+ VTPVSTA + L T++ L + PS L+
Sbjct: 388 QQHFDKSKALKVSTPLSGVRPIKESSP--CVTPVSTATHSLSRLHTMLTGLRNVPSEKLE 445
Query: 75 G-------------ANLMDNIW--------------------AEQRRLEALKLNYKVLET 101
AN + ++ A + A L YKVLET
Sbjct: 446 RILRTCSRDPTQAIANRLKEMYEIYSQHFQPDEDFSNCSKEIASRHFRFAEMLYYKVLET 505
Query: 102 MCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNL 156
+ E + L +L+ + FH+ +LAC E+V +++ F + E + ++
Sbjct: 506 VIEQEQKRLGDTDLSVILEQDAFHKSLLACCLEVVTFSYRPPGN-FPFITEIFDVPLYHF 564
Query: 157 SKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
KVI+ F+R EE L RE+ +HLN +EE++L+ + W+ GS +++ +
Sbjct: 565 YKVIEVFVRAEEGLCREVVKHLNQIEEQILDHLAWKPGSPLWDRI 609
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 830 PRKTSSLSLFFRKVYHLAGVRLRDLCAKLDISNELRKKIWT-CFEFSIIQCPELMMDRHL 888
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 889 DQLLMCAIYVMAKVTKDDRSFQHIMRCYRTQPQARSQVYRSVL 931
>gi|196011866|ref|XP_002115796.1| hypothetical protein TRIADDRAFT_59859 [Trichoplax adhaerens]
gi|190581572|gb|EDV21648.1| hypothetical protein TRIADDRAFT_59859 [Trichoplax adhaerens]
Length = 960
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 71/128 (55%), Gaps = 15/128 (11%)
Query: 83 WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTS----------LFHRCMLACSAELVL 132
+AE R +KL YK LE++ AE + +N TS +FHR +LAC E+ +
Sbjct: 449 FAENRWNLGIKLYYKTLESIILAEKR----RNKTSGELKILLEKDVFHRSLLACCLEITI 504
Query: 133 ATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWE 192
++ + F +++ G++ + KVI+ IR E LPRE+ +HLN +EE +L+ + W
Sbjct: 505 FSYGS-QKTFPWIVQVFGLSHYYFYKVIEIVIRTEHGLPREVVKHLNYIEESILDHLAWV 563
Query: 193 KGSSMYNS 200
GS ++ +
Sbjct: 564 SGSPLFTA 571
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P + + F K LA+VR+ + L L + + ++ C + ++ L + H
Sbjct: 651 KPKRTGSLGLFFRKFYYLASVRLKDLCRSLHLGEDLTSKIWT-CFEYSVMHCHELIIDRH 709
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
+DQ+++C Y + K+S+ N F EI Y +QPQ K ++R+V
Sbjct: 710 LDQLLMCAIYVICKVSRKNTKFLEIKDCYNRQPQAKKHLYRNVL 753
>gi|242072656|ref|XP_002446264.1| hypothetical protein SORBIDRAFT_06g011601 [Sorghum bicolor]
gi|241937447|gb|EES10592.1| hypothetical protein SORBIDRAFT_06g011601 [Sorghum bicolor]
Length = 91
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 50/76 (65%), Gaps = 9/76 (11%)
Query: 545 MDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLN-SNRRVRGALNFDDVDVDVGLV 602
+DAL+S SS+S+YAC+GE THAY SP KDL IN RLN S RRV LNF +V
Sbjct: 1 IDALLSPSSRSFYACIGEGTHAYQSPSKDLAAINSRLNYSGRRVNSRLNFQ-------MV 53
Query: 603 SDSMVVNSLYLQNGSA 618
SDS+V SL NG +
Sbjct: 54 SDSVVAGSLGQPNGGS 69
>gi|159155246|gb|AAI54731.1| Rb1 protein [Danio rerio]
Length = 903
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 22/235 (9%)
Query: 354 PLYPTRSNPGGGGEPCA-------ETGINICFCKINKLAAVRINAMVERLQLSQQIRESV 406
P+ P R P EP A +++ + K+ ++A +R+ + L S E +
Sbjct: 604 PVRPCRQPPVMEAEPPAPGTRAPRSNSLSLFYKKLYRMAYLRLKMLFSNLLTSHPEMEPI 663
Query: 407 YCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVF 466
+ TL L + H+DQ+I+ Y + K+ ++L FK I+ Y + P + F
Sbjct: 664 IWTPLQHTLQNEYELMRDRHLDQLIMSAMYAICKVKNVDLRFKTIVTAYKELPNTNQETF 723
Query: 467 RSVF----DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALP 522
+ V + II FYN +F +K +++ ++ + S + H P P
Sbjct: 724 KRVLIREGQYDSIIVFYNLVFMQKLKTNILQY----SSPRPPPLSPIPH------IPCSP 773
Query: 523 -DMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDI 576
SP +V +++VYVSPL++S + L+ +GES + F+ + +
Sbjct: 774 YKNSPLRVPGSNNVYVSPLKSSRVSPLVMTPRSRILISIGESFGSADKFQKINQM 828
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 27/146 (18%)
Query: 93 KLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTM------- 140
+L YKV+E+M +E + L +N + L FH +LAC+ E+V+AT+ ++
Sbjct: 437 QLYYKVMESMLKSEEKRLSVQNFSKLLNNAAFHTSLLACALEVVIATYVGSSLKNGGFGR 496
Query: 141 ------------LFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLES 188
F +L + AF+ KVI+SFI+ E +L ++ +HL ++ES
Sbjct: 497 SSGASDSVESNLCFPWILSVFQLPAFDFYKVIESFIKAEPTLKHDMVKHLEQCGHVIMES 556
Query: 189 MVWEKGSSMYNSLTVAR---PALSAE 211
+ W S +++ L +R P AE
Sbjct: 557 LAWRTDSPLFDLLKQSREEGPGEQAE 582
>gi|291390125|ref|XP_002711566.1| PREDICTED: retinoblastoma-like 2 (p130) [Oryctolagus cuniculus]
Length = 1139
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 39/195 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG-------------ANLMDNIW-------- 83
VTPVSTA + L T++ L + PS L+ AN + ++
Sbjct: 416 VTPVSTATHSLSRLHTMLTGLKNAPSEKLEQILRTCSRDPTQAIANRLKEMYEIYSQHSQ 475
Query: 84 ------------AEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLAC 126
A + A L YKVLE++ E + L +L+ + FHR +LAC
Sbjct: 476 PDEDFNNCAKETASKHFRFAEMLYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLAC 535
Query: 127 SAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLL 186
E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++L
Sbjct: 536 CLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQIL 594
Query: 187 ESMVWEKGSSMYNSL 201
+ + W+ S +++ +
Sbjct: 595 DHLAWKSDSPLWDRI 609
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 830 PRKTSSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 888
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 889 DQLLMCAIYVMAKVTKDDRSFQNIMRCYRTQPQARSQVYRSVL 931
>gi|440910036|gb|ELR59870.1| Retinoblastoma-like protein 2 [Bos grunniens mutus]
Length = 1137
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 37/209 (17%)
Query: 29 ITSPLSP-HHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------------ 75
+++PL+ + S VTPVSTA + L T++ L + PS L+
Sbjct: 399 VSTPLTGVRYIKDSSPCVTPVSTATHSLSRLHTMLTGLRNAPSERLEQTLRSCSRDPTQA 458
Query: 76 -ANL---MDNIWAEQRRLE--------------ALKLNYKVLETMCTAEAQVLHAKNLTS 117
AN M I+++ + E A L YKVLE++ E + L +L+
Sbjct: 459 IANRLKEMYEIYSQHFQSEEDGSNYIASKHFRFAEMLYYKVLESVIEQEQKRLGDMDLSG 518
Query: 118 L-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPR 172
+ FHR +LAC E+V ++K F + E + ++ KVI+ FIR E+ L R
Sbjct: 519 ILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCR 577
Query: 173 ELRRHLNSLEERLLESMVWEKGSSMYNSL 201
E+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 578 EVVKHLNQIEEQILDHLAWKPESPLWDRI 606
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 827 PRKTSSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 885
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 886 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 928
>gi|195394071|ref|XP_002055669.1| GJ19490 [Drosophila virilis]
gi|194150179|gb|EDW65870.1| GJ19490 [Drosophila virilis]
Length = 815
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 112/263 (42%), Gaps = 39/263 (14%)
Query: 351 LPPPLYPTRSNPGGGGEPCAETG-------INICFCKINKLAAVRINAMVERLQLSQQIR 403
L P++ N G C E + I K+ L +RI + L+L ++
Sbjct: 542 LISPVWEMIGNTGKPLPTCTEVNEDRAAGPLQIFLRKVYLLGWLRIGKLCSELKLGEKKP 601
Query: 404 ESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLT-FKEIIYNYGKQPQCK 462
E ++ + + ++ +T L + H+DQII+C Y +++++ T F +I+ Y QPQ
Sbjct: 602 EKIWTIF-EHSITHKTHLMQDRHLDQIIMCAIYIYIRVTKMEETKFSDIMRAYRNQPQAV 660
Query: 463 PQVFRSVFDHV--------DIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNND 514
V+R V V DII FYN + P + + +S N N
Sbjct: 661 NSVYREVLISVNEGERKYKDIIHFYNYTYVPEMTKFCINYLD---------ESADNVNLL 711
Query: 515 ASVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLT 574
S P M PKK+ HS+YV+ + +E I S + + SP K L
Sbjct: 712 MSPHPIERTMLPKKLIHNHSLYVTQMSKNE----IQQSPDQVVYII-----SASPAKKLD 762
Query: 575 DINH-RLNSNRRVRGALNFDDVD 596
D+N L S +RV L+F D D
Sbjct: 763 DMNKIVLGSGKRV---LDFTDDD 782
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 9/116 (7%)
Query: 84 AEQRRLEALKLNYKVLETMCTAEA----QVLHAKNLTSLFHRCMLACSAELVLATHKTVT 139
AE R A L Y +++ + AE Q++H +L +F+ ++AC ELVL + T
Sbjct: 428 AENRFRMAKSLYYYLMDHILRAEIKNKPQIVHKISL-DIFNETLMACCLELVLEAYIT-E 485
Query: 140 MLFLAVLERIGITAFNLSKVIQSFIRH---EESLPRELRRHLNSLEERLLESMVWE 192
+ F +L+ I AF K+I+ +RH E L R L +HLNS+EE LE + W+
Sbjct: 486 LKFPWILDCFSINAFEFHKIIEIVVRHGSREGCLTRSLVKHLNSIEETCLERLAWQ 541
>gi|64446743|gb|AAY41438.1| retinoblastoma [Limanda limanda]
Length = 753
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 96/219 (43%), Gaps = 53/219 (24%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADL----------------QGANLMDN-------- 81
TP+ AMT+ + LR+ + +PS +L + +D
Sbjct: 205 TPIRAAMTSIQQLRSDLFSTGDQPSTNLYSYFNNCTVDPTQDVLKRLKTLDQEFSRSFGQ 264
Query: 82 -------IWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
+ +QR + ++L Y+V+E M +E + L +N + L FH +LAC+ E
Sbjct: 265 AVGPRCIVLGKQRFILGVQLYYRVMEAMLKSEEKRLSVQNFSKLLNDSTFHTSLLACALE 324
Query: 130 LVLATHKT-----------------VTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPR 172
+V+A + + F +L+ + AF+ KVI+SFI+ +L +
Sbjct: 325 VVMAAYGESGFKAGGYNHGGGDSAGTDVCFPWILDVFNLAAFDFYKVIESFIKAYPTLSK 384
Query: 173 ELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPALSAE 211
E+ +HL + E ++E + W GS ++ L + +AE
Sbjct: 385 EIVKHLETCENLIMERIAWRTGSPLFELLKQEHDSGAAE 423
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 26/222 (11%)
Query: 374 INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILC 433
+++ + K+ +LA R+ + L S E + + TL L + H+DQ+++
Sbjct: 489 LSLFYKKLYRLAYTRLKILCSYLLSSHPELEPIMWTLFQHTLQHEYELMRDRHLDQLMMS 548
Query: 434 CFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---DHVD-IITFYNKIFAPTVKP 489
Y + K+ ++L FK I+ Y P + F+ V H D II FYN++F +K
Sbjct: 549 AMYAICKVKSVDLRFKTIVTAYKNLPNTNQETFKHVLITEGHYDSIIIFYNQVFMQRLKT 608
Query: 490 LLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDM------SPKKVSATHSVYVSPLRTS 543
+++ + R + S P +P SP +V +++VY+SPL+
Sbjct: 609 NILQYA-------STRPPTL------SPIPQIPRSPYKILNSPLRVPGSNNVYISPLKNP 655
Query: 544 EMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNRR 585
I +GES S F+ IN +NS+ R
Sbjct: 656 RNSPSIMTPRSRMLVSIGESFGLSSRFQ---KINQMVNSSDR 694
>gi|118150572|ref|NP_001071248.1| retinoblastoma-associated protein [Danio rerio]
gi|116487813|gb|AAI25967.1| Retinoblastoma 1 [Danio rerio]
Length = 903
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 107/242 (44%), Gaps = 25/242 (10%)
Query: 354 PLYPTRSNPGGGGEPCA-------ETGINICFCKINKLAAVRINAMVERLQLSQQIRESV 406
P+ P R P EP +++ + K+ ++A +R+ + L S E +
Sbjct: 604 PVRPCRQPPVMEAEPPTPGTRAPRSNSLSLFYKKLYRMAYLRLKMLFSNLLTSHPEMEPI 663
Query: 407 YCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVF 466
+ TL L + H+DQ+I+ Y + K+ ++L FK I+ Y + P + F
Sbjct: 664 IWTLLQHTLQNEYELMRDRHLDQLIMSAMYAICKVKNVDLRFKTIVTAYKELPNTNQETF 723
Query: 467 RSVF----DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALP 522
+ V + II FYN +F +K +++ ++ + S + H P P
Sbjct: 724 KRVLIREGQYDSIIVFYNLVFMQKLKTNILQY----SSPRPPPLSPIPH------IPCSP 773
Query: 523 -DMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLN 581
SP +V +++VYVSPL++S + L+ +GES + F+ IN L+
Sbjct: 774 YKNSPLRVPGSNNVYVSPLKSSRVSPLVMTPRSRILISIGESFGSADKFQ---KINQMLS 830
Query: 582 SN 583
S+
Sbjct: 831 SS 832
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 27/146 (18%)
Query: 93 KLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTM------- 140
+L YKV+E+M +E + L +N + L FH +LAC+ E+V+AT+ ++
Sbjct: 437 QLYYKVMESMLKSEEKRLSVQNFSKLLNNAAFHTSLLACALEVVIATYVGSSLKNGGFGR 496
Query: 141 ------------LFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLES 188
F +L + AF+ KVI+SFI+ E +L ++ +HL E ++ES
Sbjct: 497 SSGASDSVESDLCFPWILSVFQLPAFDFYKVIESFIKAEPTLKHDMVKHLEQCEHVIMES 556
Query: 189 MVWEKGSSMYNSLTVAR---PALSAE 211
+ W S +++ L +R P AE
Sbjct: 557 LAWRTDSPLFDLLKQSREEGPGEQAE 582
>gi|350424140|ref|XP_003493700.1| PREDICTED: retinoblastoma-like protein 1-like isoform 2 [Bombus
impatiens]
Length = 1007
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 74/131 (56%), Gaps = 5/131 (3%)
Query: 76 ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAEL 130
AN + + + R L Y++LE + E + ++T+L F +C+ AC E+
Sbjct: 443 ANDTTSDFGKMRLYLGQTLFYRLLEMILNDEKRKKPNYDVTNLLTKEIFIQCLFACCLEI 502
Query: 131 VLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMV 190
V+ ++K+ +F +L + + A+ KVI+ +R E L R++ +HLN +EE++LES+
Sbjct: 503 VIYSYKSNDKIFPWILNALSLDAYYFYKVIEIIVRAENQLSRDVVKHLNQIEEKILESLA 562
Query: 191 WEKGSSMYNSL 201
W+ S +++++
Sbjct: 563 WQSDSPLWSAI 573
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 116/287 (40%), Gaps = 72/287 (25%)
Query: 366 GEPCAETGINICFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLCPKRTLNQRTSLFFN 424
+P + + F K LA+VR+ + L++ +++ ++ + + ++ +RT L +
Sbjct: 709 AKPKRTGSVALFFRKFYNLASVRMLDLCGSLEIMDIDLKKKIWTIF-EYSIKERTELMKD 767
Query: 425 CHIDQIILCCFYGVAKISQLNL-TFKEIIYNYGKQPQCKPQVFRSVF------------- 470
H+DQI++C Y + K++++ +F EI+ Y QPQ + ++RSV
Sbjct: 768 RHLDQILMCAIYVICKLAKMEKNSFTEIMRCYRLQPQAESHIYRSVLIAKTPSGELQKNN 827
Query: 471 ---------------------------------DHVDIITFYNKIFAPTVKPLLVELG-P 496
D+I FYN ++ P VK + +LG
Sbjct: 828 EEIGQKDVSDKETNAAPPTPTNMAGTSQNFGEETRGDLIKFYNTVYVPQVKEVANKLGLA 887
Query: 497 VGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPL-RTSEMDALISHSSKS 555
G+ M + S+ P LP P S V S + RT + A+ + +
Sbjct: 888 RGSVM------------NLSLSP-LPKGKPPASSPVRRVTSSIMTRTLDPKAISASPAPQ 934
Query: 556 YYACVGESTHAYSPFKDLTDINHRLNS---NRRVRGALNFDDVDVDV 599
C + SP KDL IN + S R V L D+ DV++
Sbjct: 935 LSYCF-----SRSPAKDLEAINKMMISVDPKRSVGKRLLTDETDVEM 976
>gi|395839424|ref|XP_003792589.1| PREDICTED: retinoblastoma-like protein 2 [Otolemur garnettii]
Length = 1139
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 39/195 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG-------------ANL---MDNIWAEQRR 88
VTPVSTA + L T++ L + PS L+ AN M I+ + +
Sbjct: 416 VTPVSTATHSLSRLHTVLTGLKNAPSEKLEQILRACSRDPTQAIANRLKEMYEIYCQHSQ 475
Query: 89 LE-----------------ALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLAC 126
E A L YKVLE++ E + L +L+ + FHR +LAC
Sbjct: 476 PEENFGNCAKEIASKHFRFAEMLYYKVLESVIEQEQKRLGDTDLSGILEQDAFHRSLLAC 535
Query: 127 SAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLL 186
E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++L
Sbjct: 536 CLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQIL 594
Query: 187 ESMVWEKGSSMYNSL 201
+ + W+ S ++ +
Sbjct: 595 DHLAWKPESPLWERI 609
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 830 PRKTSSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 888
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 889 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 931
>gi|355715606|gb|AES05381.1| retinoblastoma-like 2 [Mustela putorius furo]
Length = 1058
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 38/194 (19%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG-------------ANLMDNIW-------- 83
VTPVSTA + L T++ L + PS L+ AN + ++
Sbjct: 336 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMYEIYSQHCQ 395
Query: 84 -----------AEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACS 127
A + A L YKVLE++ E + L +L+ + FHR +LAC
Sbjct: 396 PDEDFSSSKEIASKHFRFAEMLYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLACC 455
Query: 128 AELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLE 187
E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++L+
Sbjct: 456 LEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILD 514
Query: 188 SMVWEKGSSMYNSL 201
+ W+ S +++ +
Sbjct: 515 HLAWKPESPLWDRI 528
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Query: 363 GGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLF 422
G P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L
Sbjct: 744 GSSIRPRKTSSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELM 802
Query: 423 FNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
+ H+DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 803 MDRHLDQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 850
>gi|340722763|ref|XP_003399771.1| PREDICTED: retinoblastoma-like protein 1-like isoform 2 [Bombus
terrestris]
Length = 1041
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 76 ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAEL 130
AN + + + R L Y++LE + E + ++T+L F +C+ AC E+
Sbjct: 477 ANDTTSDFGKMRLYLGQTLFYRLLEMILNDEKRKKPNYDVTNLLTKEIFIQCLFACCLEI 536
Query: 131 VLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMV 190
V+ ++K+ +F +L + + A+ KVI+ +R E L R++ +HLN +EE++LES+
Sbjct: 537 VIYSYKSNDKIFPWILNALSLDAYYFYKVIEIIVRAENQLSRDVVKHLNQIEEKILESLA 596
Query: 191 WEKGSSMYNSL 201
W+ S ++ ++
Sbjct: 597 WQSDSPLWGAI 607
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 116/287 (40%), Gaps = 72/287 (25%)
Query: 366 GEPCAETGINICFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLCPKRTLNQRTSLFFN 424
+P + + F K LA+VR+ + L++ +++ ++ + + ++ +RT L +
Sbjct: 743 AKPKRTGSVALFFRKFYNLASVRMLDLCGSLEIMDIDLKKKIWTIF-EYSIKERTELMKD 801
Query: 425 CHIDQIILCCFYGVAKISQLNL-TFKEIIYNYGKQPQCKPQVFRSVF------------- 470
H+DQI++C Y + K++++ +F EI+ Y QPQ + ++RSV
Sbjct: 802 RHLDQILMCAIYVICKLAKMEKNSFTEIMRCYRLQPQAESHIYRSVLIAKTPSGELQKNN 861
Query: 471 ---------------------------------DHVDIITFYNKIFAPTVKPLLVELG-P 496
D+I FYN ++ P VK + +LG
Sbjct: 862 EEIGQKDVSDKETNAAPPTPTNMAGTSQNFGEETRGDLIKFYNTVYVPQVKEVANKLGLA 921
Query: 497 VGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPL-RTSEMDALISHSSKS 555
G+ M + S+ P LP P S V S + RT + A+ + +
Sbjct: 922 RGSVM------------NLSLSP-LPKGKPPASSPVRRVTSSIMTRTLDPKAISASPAPQ 968
Query: 556 YYACVGESTHAYSPFKDLTDINHRLNS---NRRVRGALNFDDVDVDV 599
C + SP KDL IN + S R V L D+ DV++
Sbjct: 969 LSYCF-----SRSPAKDLEAINKMMISVDPKRSVGKRLLTDETDVEM 1010
>gi|350424134|ref|XP_003493699.1| PREDICTED: retinoblastoma-like protein 1-like isoform 1 [Bombus
impatiens]
Length = 1041
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 74/131 (56%), Gaps = 5/131 (3%)
Query: 76 ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAEL 130
AN + + + R L Y++LE + E + ++T+L F +C+ AC E+
Sbjct: 477 ANDTTSDFGKMRLYLGQTLFYRLLEMILNDEKRKKPNYDVTNLLTKEIFIQCLFACCLEI 536
Query: 131 VLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMV 190
V+ ++K+ +F +L + + A+ KVI+ +R E L R++ +HLN +EE++LES+
Sbjct: 537 VIYSYKSNDKIFPWILNALSLDAYYFYKVIEIIVRAENQLSRDVVKHLNQIEEKILESLA 596
Query: 191 WEKGSSMYNSL 201
W+ S +++++
Sbjct: 597 WQSDSPLWSAI 607
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 116/287 (40%), Gaps = 72/287 (25%)
Query: 366 GEPCAETGINICFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLCPKRTLNQRTSLFFN 424
+P + + F K LA+VR+ + L++ +++ ++ + + ++ +RT L +
Sbjct: 743 AKPKRTGSVALFFRKFYNLASVRMLDLCGSLEIMDIDLKKKIWTIF-EYSIKERTELMKD 801
Query: 425 CHIDQIILCCFYGVAKISQLNL-TFKEIIYNYGKQPQCKPQVFRSVF------------- 470
H+DQI++C Y + K++++ +F EI+ Y QPQ + ++RSV
Sbjct: 802 RHLDQILMCAIYVICKLAKMEKNSFTEIMRCYRLQPQAESHIYRSVLIAKTPSGELQKNN 861
Query: 471 ---------------------------------DHVDIITFYNKIFAPTVKPLLVELG-P 496
D+I FYN ++ P VK + +LG
Sbjct: 862 EEIGQKDVSDKETNAAPPTPTNMAGTSQNFGEETRGDLIKFYNTVYVPQVKEVANKLGLA 921
Query: 497 VGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPL-RTSEMDALISHSSKS 555
G+ M + S+ P LP P S V S + RT + A+ + +
Sbjct: 922 RGSVM------------NLSLSP-LPKGKPPASSPVRRVTSSIMTRTLDPKAISASPAPQ 968
Query: 556 YYACVGESTHAYSPFKDLTDINHRLNS---NRRVRGALNFDDVDVDV 599
C + SP KDL IN + S R V L D+ DV++
Sbjct: 969 LSYCF-----SRSPAKDLEAINKMMISVDPKRSVGKRLLTDETDVEM 1010
>gi|340722761|ref|XP_003399770.1| PREDICTED: retinoblastoma-like protein 1-like isoform 1 [Bombus
terrestris]
Length = 1007
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 76 ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAEL 130
AN + + + R L Y++LE + E + ++T+L F +C+ AC E+
Sbjct: 443 ANDTTSDFGKMRLYLGQTLFYRLLEMILNDEKRKKPNYDVTNLLTKEIFIQCLFACCLEI 502
Query: 131 VLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMV 190
V+ ++K+ +F +L + + A+ KVI+ +R E L R++ +HLN +EE++LES+
Sbjct: 503 VIYSYKSNDKIFPWILNALSLDAYYFYKVIEIIVRAENQLSRDVVKHLNQIEEKILESLA 562
Query: 191 WEKGSSMYNSL 201
W+ S ++ ++
Sbjct: 563 WQSDSPLWGAI 573
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 116/287 (40%), Gaps = 72/287 (25%)
Query: 366 GEPCAETGINICFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLCPKRTLNQRTSLFFN 424
+P + + F K LA+VR+ + L++ +++ ++ + + ++ +RT L +
Sbjct: 709 AKPKRTGSVALFFRKFYNLASVRMLDLCGSLEIMDIDLKKKIWTIF-EYSIKERTELMKD 767
Query: 425 CHIDQIILCCFYGVAKISQLNL-TFKEIIYNYGKQPQCKPQVFRSVF------------- 470
H+DQI++C Y + K++++ +F EI+ Y QPQ + ++RSV
Sbjct: 768 RHLDQILMCAIYVICKLAKMEKNSFTEIMRCYRLQPQAESHIYRSVLIAKTPSGELQKNN 827
Query: 471 ---------------------------------DHVDIITFYNKIFAPTVKPLLVELG-P 496
D+I FYN ++ P VK + +LG
Sbjct: 828 EEIGQKDVSDKETNAAPPTPTNMAGTSQNFGEETRGDLIKFYNTVYVPQVKEVANKLGLA 887
Query: 497 VGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPL-RTSEMDALISHSSKS 555
G+ M + S+ P LP P S V S + RT + A+ + +
Sbjct: 888 RGSVM------------NLSLSP-LPKGKPPASSPVRRVTSSIMTRTLDPKAISASPAPQ 934
Query: 556 YYACVGESTHAYSPFKDLTDINHRLNS---NRRVRGALNFDDVDVDV 599
C + SP KDL IN + S R V L D+ DV++
Sbjct: 935 LSYCF-----SRSPAKDLEAINKMMISVDPKRSVGKRLLTDETDVEM 976
>gi|148679123|gb|EDL11070.1| retinoblastoma-like 2, isoform CRA_a [Mus musculus]
Length = 956
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 67/116 (57%), Gaps = 6/116 (5%)
Query: 91 ALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAV 145
A L YKVLE++ E + L +L+ + FHR +LAC E+V +HK F +
Sbjct: 313 AEMLYYKVLESVIEQEQKRLGDMDLSGVLEHDAFHRSLLACCLEVVAFSHKPPGN-FPFI 371
Query: 146 LERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
E + ++ KVI+ FIR E+ L RE+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 372 AEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLAWKTKSPLWDRI 427
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 74/132 (56%), Gaps = 13/132 (9%)
Query: 351 LPPPLYPTRSNPGGG----GEPCAETGIN--------ICFCKINKLAAVRINAMVERLQL 398
+P P+ + +PGG G+P + I + F K+ LA VR+ + +L +
Sbjct: 618 VPGPVAIQQISPGGQQQNPGQPLTSSSIRPRKTSSLALFFRKVYYLAGVRLRDLCIKLDI 677
Query: 399 SQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQ 458
S ++R+ ++ C + ++ Q T L + H+DQ+++C Y +AK+++ + +F+ I+ Y Q
Sbjct: 678 SDELRKKIWT-CFEFSIIQCTELMMDRHLDQLLMCAIYVMAKVTKEDRSFQNIMRCYRTQ 736
Query: 459 PQCKPQVFRSVF 470
PQ + QV+RSV
Sbjct: 737 PQARSQVYRSVL 748
>gi|170932488|ref|NP_035380.3| retinoblastoma-like protein 2 [Mus musculus]
gi|341942165|sp|Q64700.3|RBL2_MOUSE RecName: Full=Retinoblastoma-like protein 2; AltName: Full=130 kDa
retinoblastoma-associated protein; Short=p130; AltName:
Full=Retinoblastoma-related protein 2; Short=RBR-2;
AltName: Full=pRb2
gi|74213520|dbj|BAE35570.1| unnamed protein product [Mus musculus]
Length = 1135
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 413 VTPVSTAAHSLSRLHTMLSGLRNAPSEKLERILRSCSRDPTQAIADRLKEMYEIYSQHFQ 472
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I + R + L YKVLE++ E + L +L+ + FHR +LA
Sbjct: 473 PDENFSNCAKEIANKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGVLEHDAFHRSLLA 531
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V +HK F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 532 CCLEVVAFSHKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 590
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S +++ +
Sbjct: 591 LDHLAWKTKSPLWDRI 606
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 74/132 (56%), Gaps = 13/132 (9%)
Query: 351 LPPPLYPTRSNPGGG----GEPCAETGIN--------ICFCKINKLAAVRINAMVERLQL 398
+P P+ + +PGG G+P + I + F K+ LA VR+ + +L +
Sbjct: 797 VPGPVAIQQISPGGQQQNPGQPLTSSSIRPRKTSSLALFFRKVYYLAGVRLRDLCIKLDI 856
Query: 399 SQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQ 458
S ++R+ ++ C + ++ Q T L + H+DQ+++C Y +AK+++ + +F+ I+ Y Q
Sbjct: 857 SDELRKKIWT-CFEFSIIQCTELMMDRHLDQLLMCAIYVMAKVTKEDRSFQNIMRCYRTQ 915
Query: 459 PQCKPQVFRSVF 470
PQ + QV+RSV
Sbjct: 916 PQARSQVYRSVL 927
>gi|157829808|pdb|1AD6|A Chain A, Domain A Of Human Retinoblastoma Tumor Suppressor
Length = 185
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 68/118 (57%), Gaps = 14/118 (11%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 67 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 126
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESM 189
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+
Sbjct: 127 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESL 184
>gi|148679124|gb|EDL11071.1| retinoblastoma-like 2, isoform CRA_b [Mus musculus]
Length = 913
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 66/113 (58%), Gaps = 6/113 (5%)
Query: 94 LNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLER 148
L YKVLE++ E + L +L+ + FHR +LAC E+V +HK F + E
Sbjct: 273 LYYKVLESVIEQEQKRLGDMDLSGVLEHDAFHRSLLACCLEVVAFSHKPPGN-FPFIAEI 331
Query: 149 IGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
+ ++ KVI+ FIR E+ L RE+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 332 FDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLAWKTKSPLWDRI 384
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 74/132 (56%), Gaps = 13/132 (9%)
Query: 351 LPPPLYPTRSNPGGG----GEPCAETGIN--------ICFCKINKLAAVRINAMVERLQL 398
+P P+ + +PGG G+P + I + F K+ LA VR+ + +L +
Sbjct: 575 VPGPVAIQQISPGGQQQNPGQPLTSSSIRPRKTSSLALFFRKVYYLAGVRLRDLCIKLDI 634
Query: 399 SQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQ 458
S ++R+ ++ C + ++ Q T L + H+DQ+++C Y +AK+++ + +F+ I+ Y Q
Sbjct: 635 SDELRKKIWT-CFEFSIIQCTELMMDRHLDQLLMCAIYVMAKVTKEDRSFQNIMRCYRTQ 693
Query: 459 PQCKPQVFRSVF 470
PQ + QV+RSV
Sbjct: 694 PQARSQVYRSVL 705
>gi|1185008|gb|AAC52555.1| Rb-related p130 [Mus musculus]
Length = 1092
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 370 VTPVSTAAHSLSRLHTMLSGLRNAPSEKLERILRSCSRDPTQAIADRLKEMYEIYSQHFQ 429
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I + R + L YKVLE++ E + L +L+ + FHR +LA
Sbjct: 430 PDENFSNCAKEIANKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGVLEHDAFHRSLLA 488
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V +HK F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 489 CCLEVVAFSHKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 547
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S +++ +
Sbjct: 548 LDHLAWKTKSPLWDRI 563
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 74/132 (56%), Gaps = 13/132 (9%)
Query: 351 LPPPLYPTRSNPGGG----GEPCAETGIN--------ICFCKINKLAAVRINAMVERLQL 398
+P P+ + +PGG G+P + I + F K+ LA VR+ + +L +
Sbjct: 754 VPGPVAIQQISPGGQQQNPGQPLTSSSIRARKTSSLALFFRKVYYLAGVRLRDLCIKLDI 813
Query: 399 SQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQ 458
S ++R+ ++ C + ++ Q T L + H+DQ+++C Y +AK+++ + +F+ I+ Y Q
Sbjct: 814 SDELRKKIWT-CFEFSIIQCTELMMDRHLDQLLMCAIYVMAKVTKEDRSFQNIMRCYRTQ 872
Query: 459 PQCKPQVFRSVF 470
PQ + QV+RSV
Sbjct: 873 PQARSQVYRSVL 884
>gi|427785401|gb|JAA58152.1| Putative rb retinoblastoma tumor suppressor-related protein
[Rhipicephalus pulchellus]
Length = 998
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 85/160 (53%), Gaps = 10/160 (6%)
Query: 49 STAMTTAKWLRTIICPLPSKPSADLQGANL-MDNIWAEQRRLEALKLNYKVLETMCTAEA 107
++ + T K + C ++P++D +G++ MD +A +R L YK LE + E
Sbjct: 421 ASVLETVKSMGDAFCTAYAQPASDQRGSSAHMD--FARKRLQLGETLFYKALENIVNIEV 478
Query: 108 QV------LHAKNLTSLFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQ 161
+ L A S+F + + AC E+V+ + + F +LE + +N K+I+
Sbjct: 479 KQKRPNTDLAAHLSHSIFQQSLFACCLEIVMFCYNS-QRDFPWILEVFNLMPYNFYKIIE 537
Query: 162 SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
IR EE L RE+ +HLN +EE++LE + W+ S +++++
Sbjct: 538 PLIRAEEGLWREVVKHLNHIEEQILECLSWKDDSPLWDAI 577
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 57/105 (54%)
Query: 366 GEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNC 425
+P + + F K+ LA VR + RL + Q+ + C + ++ L +
Sbjct: 677 NKPLRSGSLALFFRKVYHLAGVRFQDLCARLGILQKDIQLKIWTCFEHSIVCHIDLMRDR 736
Query: 426 HIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
H+DQ+ILC Y + K++++ +F+EI++ Y +QPQ K V+RSV
Sbjct: 737 HLDQLILCAVYVITKVTRVEKSFQEILHCYRQQPQNKSHVYRSVL 781
>gi|73949852|ref|XP_535303.2| PREDICTED: retinoblastoma-like protein 2 isoform 1 [Canis lupus
familiaris]
Length = 1139
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 38/194 (19%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG-------------ANLMDNIW-------- 83
VTPVSTA + L T++ L + PS L+ AN + ++
Sbjct: 416 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMYEIYSQHCQ 475
Query: 84 -----------AEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACS 127
A + A L YKVLE++ E + L +L+ + FHR +LAC
Sbjct: 476 PDEDFSNSKEIASKHFRFAEMLYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLACC 535
Query: 128 AELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLE 187
E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++L+
Sbjct: 536 LEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILD 594
Query: 188 SMVWEKGSSMYNSL 201
+ W+ S +++ +
Sbjct: 595 HLAWKPESPLWDRI 608
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Query: 363 GGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLF 422
G P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L
Sbjct: 824 GSSIRPRKTSSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELM 882
Query: 423 FNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
+ H+DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 883 MDRHLDQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 930
>gi|1255232|gb|AAC52598.1| retinoblastoma-related protein p130 [Mus musculus]
gi|1589572|prf||2211351A retinoblastoma protein p130
Length = 1135
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 67/116 (57%), Gaps = 6/116 (5%)
Query: 91 ALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAV 145
A L YKVLE++ E + L +L+ + FHR +LAC E+V +HK F +
Sbjct: 492 AEMLYYKVLESVIEQEQKRLGDMDLSGVLEHDAFHRSLLACCLEVVAFSHKPPGN-FPFI 550
Query: 146 LERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
E + ++ KVI+ FIR E+ L RE+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 551 AEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLAWKTKSPLWDRI 606
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 74/132 (56%), Gaps = 13/132 (9%)
Query: 351 LPPPLYPTRSNPGGG----GEPCAETGIN--------ICFCKINKLAAVRINAMVERLQL 398
+P P+ + +PGG G+P + I + F K+ LA VR+ + +L +
Sbjct: 797 VPGPVAIQQISPGGQQQNPGQPLTSSSIRPRKTSSLALFFRKVYYLAGVRLRDLCIKLDI 856
Query: 399 SQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQ 458
S ++R+ ++ C + ++ Q T L + H+DQ+++C Y +AK+++ + +F+ I+ Y Q
Sbjct: 857 SDELRKKIWT-CFEFSIIQCTELMMDRHLDQLLMCAIYVMAKVTKEDRSFQNIMRCYRTQ 915
Query: 459 PQCKPQVFRSVF 470
PQ + QV+RSV
Sbjct: 916 PQARSQVYRSVL 927
>gi|18088202|gb|AAH20528.1| Retinoblastoma-like 2 [Mus musculus]
Length = 1135
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 67/116 (57%), Gaps = 6/116 (5%)
Query: 91 ALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAV 145
A L YKVLE++ E + L +L+ + FHR +LAC E+V +HK F +
Sbjct: 492 AEMLYYKVLESVIEQEQKRLGDMDLSGVLEHDAFHRSLLACCLEVVAFSHKPPGN-FPFI 550
Query: 146 LERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
E + ++ KVI+ FIR E+ L RE+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 551 AEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLAWKTKSPLWDRI 606
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 74/132 (56%), Gaps = 13/132 (9%)
Query: 351 LPPPLYPTRSNPGGG----GEPCAETGIN--------ICFCKINKLAAVRINAMVERLQL 398
+P P+ + +PGG G+P + I + F K+ LA VR+ + +L +
Sbjct: 797 VPGPVAIQQISPGGQQQNPGQPLTSSSIRPRKTSSLALFFRKVYYLAGVRLRDLCIKLDI 856
Query: 399 SQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQ 458
S ++R+ ++ C + ++ Q T L + H+DQ+++C Y +AK+++ + +F+ I+ Y Q
Sbjct: 857 SDELRKKIWT-CFEFSIIQCTELMMDRHLDQLLMCAIYVMAKVTKEDRSFQNIMRCYRTQ 915
Query: 459 PQCKPQVFRSVF 470
PQ + QV+RSV
Sbjct: 916 PQARSQVYRSVL 927
>gi|345319489|ref|XP_001520195.2| PREDICTED: retinoblastoma-like protein 2 [Ornithorhynchus anatinus]
Length = 1074
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 108/225 (48%), Gaps = 42/225 (18%)
Query: 16 KRKFDSLASPVKTITSPLSP-HHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSADLQ 74
++ FD S V I +PL+ ++ S VTP+S A + L T++ L + PS +L+
Sbjct: 331 QQHFDR--SKVFRIATPLTGRNYIKESSPYVTPISIATHSLSRLHTMLKGLKNAPSENLE 388
Query: 75 G-------------ANLMDNIW--------------AEQRRLE------ALKLNYKVLET 101
AN + ++ + R +E A L YKVLE+
Sbjct: 389 QILRACSRDPSQSIANRLKEMYELYCQHSQADGDFGSCAREIESKHFRLAEVLYYKVLES 448
Query: 102 MCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNL 156
+ E + L +L+ + FHR +LAC E++ ++K F + E + ++
Sbjct: 449 VLEQERKRLGDTDLSGILEQDAFHRSLLACCLEIITFSYKPPGN-FPLITEIFDVPLYHF 507
Query: 157 SKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
KVI+ FIR E+ L RE+ +HLN +EE++L+ M W+ S +++ +
Sbjct: 508 YKVIEVFIRAEDGLCREVVKHLNHIEEQILDHMAWKPDSPLWDRI 552
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 363 GGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLF 422
G P + +++ F K+ LA+VR+ + +L++S ++R+ ++ C + ++ Q L
Sbjct: 759 AAGLRPRKTSSLSLFFRKVYHLASVRLRDLCAKLEISDELRKKIWT-CFEFSVVQYPELM 817
Query: 423 FNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
+ H+DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 818 RDRHLDQLLMCAIYVMAKVTKDDKSFQNIMRCYRTQPQARSQVYRSVL 865
>gi|328718292|ref|XP_001943094.2| PREDICTED: retinoblastoma-like protein 1-like [Acyrthosiphon pisum]
Length = 697
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 72/125 (57%), Gaps = 5/125 (4%)
Query: 79 MDNIWAEQRRLEALKLNYKVLETMCTAEAQ--VLHAKNLT--SLFHRCMLACSAELVLAT 134
+ N +AE+R + A YK+ E + EA+ KNL ++FH + AC E+V+
Sbjct: 444 LHNDFAEKRLIMAKTWFYKLFENIIAKEAKNPKYDIKNLICHAVFHETLFACCLEMVIFA 503
Query: 135 HKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKG 194
+ + F VL + I ++ KVI+ +R E+ LPR++ +HLN +EE++L+S+ W+
Sbjct: 504 YNS-QRAFPWVLNALQIHPYHFYKVIEVIVRVEDKLPRDMIKHLNRVEEQVLDSLSWQSE 562
Query: 195 SSMYN 199
S +++
Sbjct: 563 SPLWD 567
>gi|301752866|ref|XP_002912283.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 2-like
[Ailuropoda melanoleuca]
Length = 1137
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 38/194 (19%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG-------------ANLMDNIW-------- 83
VTPVSTA + L T++ L + PS L+ AN + ++
Sbjct: 414 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMYEIYSQHCQ 473
Query: 84 -----------AEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACS 127
A + A L YKVLE++ E + L +L+ + FHR +LAC
Sbjct: 474 SDEDFSNSKEIASKHFRFAEMLYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLACC 533
Query: 128 AELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLE 187
E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++L+
Sbjct: 534 LEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILD 592
Query: 188 SMVWEKGSSMYNSL 201
+ W+ S +++ +
Sbjct: 593 HLAWKPESPLWDRI 606
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 827 PRKTSSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 885
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 886 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 928
>gi|410983523|ref|XP_003998088.1| PREDICTED: retinoblastoma-like protein 2 [Felis catus]
Length = 1265
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 39/195 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG-------------ANLMDNIW-------- 83
VTPVSTA + L T++ L + PS L+ AN + ++
Sbjct: 542 VTPVSTATHSLSRLHTMLTGLKNTPSEKLEQILRTCSRDPTQAIANRLKEMYEIYSQHSQ 601
Query: 84 ------------AEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLAC 126
A + A L YKVLE++ E + L +L+ + FHR +LAC
Sbjct: 602 PDEDFSNSTKEIASKHFRFAEMLYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLAC 661
Query: 127 SAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLL 186
E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++L
Sbjct: 662 CLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQIL 720
Query: 187 ESMVWEKGSSMYNSL 201
+ + W+ S +++ +
Sbjct: 721 DHLAWKPESPLWDRI 735
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Query: 363 GGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLF 422
G P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L
Sbjct: 951 GNSIRPRKTSSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELM 1009
Query: 423 FNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
+ H+DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 1010 MDRHLDQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 1057
>gi|403292586|ref|XP_003937318.1| PREDICTED: retinoblastoma-like protein 2 [Saimiri boliviensis
boliviensis]
Length = 1082
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 359 VTPVSTATHSLSRLHTMLAGLKNAPSEKLEQILRTCSRDPSQAIANRLKEMFEIYSQHFQ 418
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I ++ R + L YKVLE++ E + L +L+ + FHR +LA
Sbjct: 419 PDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLA 477
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 478 CCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 536
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S ++ +
Sbjct: 537 LDHLAWKPESPLWEKI 552
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 773 PRKTSSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 831
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 832 DQLLMCAIYVMAKVTKEDRSFQNIMRCYRTQPQARSQVYRSVL 874
>gi|443697256|gb|ELT97791.1| hypothetical protein CAPTEDRAFT_132839 [Capitella teleta]
Length = 323
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 70/127 (55%), Gaps = 5/127 (3%)
Query: 373 GINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIIL 432
+++ F K +LA R++ + L L+ +++ ++ C + + RT + + H+DQ+I+
Sbjct: 171 SLSLFFVKACRLAHHRMSILCGHLDLNSDLQKQIWS-CIETCICHRTKILQDRHLDQVIM 229
Query: 433 CCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--DHV--DIITFYNKIFAPTVK 488
C YGV KI + ++TF+ I+ Y P QV+R V D II+FYN+IF +K
Sbjct: 230 CALYGVCKIREKDITFRSIVKKYLLLPHSSSQVYRHVAMPDEAASSIISFYNQIFMQQLK 289
Query: 489 PLLVELG 495
LV +
Sbjct: 290 DHLVAIS 296
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 12/134 (8%)
Query: 84 AEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKT- 137
AE R A KL YK L ++ E + L++L F + +LAC E+V+AT+
Sbjct: 21 AELRFQMASKLFYKTLISLLQLEQNEDSSSELSALLQMAKFLKSLLACCIEVVMATYNNS 80
Query: 138 ------VTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+T F +L + F+L +V+ SF++ E LP + +HL ++E+ ++ +VW
Sbjct: 81 CEQYGMLTGSFEWILRVFNLHGFDLFRVLGSFLKAETQLPSSVAKHLQNVEDEIILHVVW 140
Query: 192 EKGSSMYNSLTVAR 205
+ S ++++L R
Sbjct: 141 KAESPLFDTLLSNR 154
>gi|338723332|ref|XP_001492739.3| PREDICTED: retinoblastoma-like protein 2 [Equus caballus]
Length = 1145
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 421 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMYEIYSQHFQ 480
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I ++ R + L YKVLE++ E + L +L+ + FHR +LA
Sbjct: 481 PDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLA 539
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V ++K F V E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 540 CCLEVVTFSYKPPGN-FPFVTEIFDVPLYHFYKVIEIFIRAEDGLCREVVKHLNQIEEQI 598
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S +++ +
Sbjct: 599 LDHLAWKPESPLWDRI 614
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 835 PRKTSSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 893
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 894 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 936
>gi|4139827|pdb|1GUX|B Chain B, Rb Pocket Bound To E7 Lxcxe Motif
gi|29726892|pdb|1O9K|B Chain B, Crystal Structure Of The Retinoblastoma Tumour Suppressor
Protein Bound To E2f Peptide
gi|29726894|pdb|1O9K|D Chain D, Crystal Structure Of The Retinoblastoma Tumour Suppressor
Protein Bound To E2f Peptide
gi|29726896|pdb|1O9K|F Chain F, Crystal Structure Of The Retinoblastoma Tumour Suppressor
Protein Bound To E2f Peptide
gi|29726898|pdb|1O9K|H Chain H, Crystal Structure Of The Retinoblastoma Tumour Suppressor
Protein Bound To E2f Peptide
Length = 152
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + ERL E + + TL L + H
Sbjct: 5 KPLKSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRH 64
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 65 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSV 124
Query: 483 FAPTVK 488
F +K
Sbjct: 125 FMQRLK 130
>gi|242008733|ref|XP_002425155.1| P107, putative [Pediculus humanus corporis]
gi|212508849|gb|EEB12417.1| P107, putative [Pediculus humanus corporis]
Length = 842
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 74/124 (59%), Gaps = 5/124 (4%)
Query: 82 IWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLT----SLFHRCMLACSAELVLATHKT 137
I+ + + + A KL YK+LE + E ++ NL ++ H+C+ ACS E+++ T+ +
Sbjct: 387 IFYDDKLVLAKKLFYKLLENILLYEKKIKPDVNLNVRSQNIVHQCLFACSLEIIIYTYNS 446
Query: 138 VTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSM 197
F +L + I ++ KVI+ +R E+ LPR + ++L+ +EE +LE++VW+ S +
Sbjct: 447 QKS-FPWILNALNIESYYFYKVIEMVLRTEDQLPRVIVKYLSMVEENILETLVWQNSSPL 505
Query: 198 YNSL 201
+ +L
Sbjct: 506 WIAL 509
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 101/273 (36%), Gaps = 77/273 (28%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P ++I F K L++VR+ + +L + C + + L + H
Sbjct: 545 KPKRTGSLSIFFRKFYSLSSVRMQDLCVKLGIKDISLMKKIWTCFEHCIVHHIELMQDRH 604
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---------------- 470
+DQI++C Y + K +F EI+ Y QPQ V+RSV
Sbjct: 605 LDQILMCSIYVICKFEPTERSFMEIMKCYRFQPQAASHVYRSVLLSKTALGKFFKRNNEN 664
Query: 471 ---------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKT 503
+ D+I FYN ++ TV+ + ++
Sbjct: 665 SNKGNGISSVPLTPNNLAGTSTSYDNQERGDLIKFYNSVYVATVQSFV-------NRFRS 717
Query: 504 NRDSEVNHNNDASVFPALPD-----MSPKK----------VSATHSVYVSPLRTSEMDAL 548
N+ S+V+ + +P SP + VS HSVYV PL TS
Sbjct: 718 NQQSDVS----LQLLSPIPKGRSTSKSPMRRVSQKHPVFIVSQKHSVYVRPLDTS---FN 770
Query: 549 ISHSSKSYYACVGESTHAYSPFKDLTDINHRLN 581
+S S++ CV SP KDL IN +N
Sbjct: 771 LSSGSQALTYCVNR-----SPAKDLRAINDMIN 798
>gi|355715555|gb|AES05366.1| retinoblastoma 1 [Mustela putorius furo]
Length = 267
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 108 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 167
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 168 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSV 227
Query: 483 FAPTVK 488
F +K
Sbjct: 228 FMQRLK 233
>gi|21759787|gb|AAH34490.1| Retinoblastoma-like 2 (p130) [Homo sapiens]
Length = 1139
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 416 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFEIYSQHFQ 475
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I ++ R + L YKVLE++ E + L +L+ + FHR +LA
Sbjct: 476 PDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLA 534
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 535 CCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 593
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S ++ +
Sbjct: 594 LDHLAWKPESPLWEKI 609
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LAAVR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 830 PRKTSSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 888
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 889 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 931
>gi|296231081|ref|XP_002760993.1| PREDICTED: retinoblastoma-like protein 2 [Callithrix jacchus]
Length = 1140
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 417 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPSQAIANRLKEMFEIYSQHFQ 476
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I ++ R + L YKVLE++ E + L +L+ + FHR +LA
Sbjct: 477 PDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLA 535
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 536 CCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 594
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S ++ +
Sbjct: 595 LDHLAWKPESPLWEKI 610
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 831 PRKTSSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 889
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 890 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 932
>gi|426382185|ref|XP_004057695.1| PREDICTED: retinoblastoma-like protein 2 [Gorilla gorilla gorilla]
Length = 1139
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 416 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFEIYSQHFQ 475
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I ++ R + L YKVLE++ E + L +L+ + FHR +LA
Sbjct: 476 PDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLA 534
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 535 CCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 593
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S ++ +
Sbjct: 594 LDHLAWKPESPLWEKI 609
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LAAVR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 830 PRKTSSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 888
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 889 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 931
>gi|397502866|ref|XP_003822060.1| PREDICTED: retinoblastoma-like protein 2 [Pan paniscus]
Length = 1139
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 416 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFEIYSQHFQ 475
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I ++ R + L YKVLE++ E + L +L+ + FHR +LA
Sbjct: 476 PDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLA 534
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 535 CCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 593
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S ++ +
Sbjct: 594 LDHLAWKPESPLWEKI 609
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LAAVR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 830 PRKTSSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 888
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 889 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 931
>gi|355715603|gb|AES05380.1| retinoblastoma-like 1 [Mustela putorius furo]
Length = 266
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 106/252 (42%), Gaps = 63/252 (25%)
Query: 388 RINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLT 447
R+ + +L +S ++R ++ C + TL L + H+DQ++LC FY +AK+++ T
Sbjct: 1 RLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERT 59
Query: 448 FKEIIYNYGKQPQCKPQVFRSVF------------------------------------- 470
F+EI+ +Y QPQ V+RSV
Sbjct: 60 FQEIMKSYRNQPQANSHVYRSVLLKSIPREVVAYNRNVNGDFEMTDCDLEDATKTPDCSS 119
Query: 471 -----DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDM- 524
+ D+I FYN I+ VK ++ +N+D V S FP +
Sbjct: 120 GPVKEERGDLIKFYNTIYVGRVKSFALKYD------LSNQD-HVMEAPPLSPFPRIKQQP 172
Query: 525 -SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINH--RLN 581
SP+++S HSVYVSP + + ++ S Y G SP K L DIN+ R
Sbjct: 173 GSPRRISQQHSVYVSPHKNG---SGLTPRSALLYRFNG------SPSKSLKDINNMIRQG 223
Query: 582 SNRRVRGALNFD 593
R + A+ D
Sbjct: 224 EQRTKKRAIAID 235
>gi|114662486|ref|XP_523371.2| PREDICTED: retinoblastoma-like protein 2 isoform 7 [Pan
troglodytes]
Length = 1139
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 416 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFEIYSQHFQ 475
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I ++ R + L YKVLE++ E + L +L+ + FHR +LA
Sbjct: 476 PDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLA 534
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 535 CCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 593
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S ++ +
Sbjct: 594 LDHLAWKPESPLWEKI 609
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LAAVR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 830 PRKTSSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 888
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 889 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 931
>gi|91086521|ref|XP_971815.1| PREDICTED: similar to Retinoblastoma-like protein 1 (107 kDa
retinoblastoma-associated protein) (p107) (PRB1)
[Tribolium castaneum]
Length = 940
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 79 MDNIWAEQRRLE-ALKLNYKVLETMCTAEAQV---LHAKNLTSLFHRCMLACSAELVLAT 134
+D QRRL+ A L YK +E++ E + L A +F+ CM AC E+V+ +
Sbjct: 436 VDQREVAQRRLQLATTLFYKFIESILQNERSIHADLSAIVEKDVFYECMFACCLEIVIYS 495
Query: 135 HKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKG 194
+ + F +L+ + I +N KVI+ IR + L R+ +HLN +EE +L S+VW+
Sbjct: 496 YNS-RQRFPWILKALQIQPYNFVKVIELIIRSRDKLSRDTIKHLNMIEETILSSLVWKSD 554
Query: 195 SSMYNSLT 202
S ++ ++T
Sbjct: 555 SLIWEAIT 562
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 102/257 (39%), Gaps = 39/257 (15%)
Query: 347 KSKPLP-PPLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQ-QIRE 404
KS P+P P R P G++I F K L+ R+ + L+++ +
Sbjct: 664 KSTPVPVQQTTPQRQENVAQARPRRTGGVSIVFRKFYNLSGERMEHLCTHLKITNTDTKR 723
Query: 405 SVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQ 464
++ + + L + ++DQ+++C Y + K+++LN F EII +Y QPQ
Sbjct: 724 KIWTVFEELVRKNHCELMKDRNLDQLLMCAVYMICKLTKLNKNFTEIIKSYRSQPQATSD 783
Query: 465 VFRSVF------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRD 506
++R+V + D+I FYNK+ +K + G
Sbjct: 784 IYRNVLISSKKVVVVDGETTEIPEEWGDLIQFYNKVIIQAMKKFAQKFVVRG-------- 835
Query: 507 SEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHA 566
N + LP + V ++++ PL + + + +YY +
Sbjct: 836 ---EENIGDILLSPLPASRGQVVQVFDNIFIKPLESPTL-TFGNGKVLNYY-------FS 884
Query: 567 YSPFKDLTDINHRLNSN 583
SP KDL DIN + N
Sbjct: 885 RSPSKDLKDINKAIRGN 901
>gi|416031|emb|CAA53661.1| 130K protein [Homo sapiens]
gi|739072|prf||2002263A E1A-associated protein gp130
Length = 1139
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 416 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFEIYSQHFQ 475
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I ++ R + L YKVLE++ E + L +L+ + FHR +LA
Sbjct: 476 PDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLA 534
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 535 CCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 593
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S ++ +
Sbjct: 594 LDHLAWKPESPLWEKI 609
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LAAVR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 830 PRKTSSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 888
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 889 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 931
>gi|297698736|ref|XP_002826465.1| PREDICTED: retinoblastoma-like protein 2 [Pongo abelii]
Length = 1139
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 416 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFEIYSQHFQ 475
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I ++ R + L YKVLE++ E + L +L+ + FHR +LA
Sbjct: 476 PDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLA 534
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 535 CCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 593
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S ++ +
Sbjct: 594 LDHLAWKPESPLWEKI 609
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LAAVR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 830 PRKTSSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 888
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 889 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 931
>gi|172072597|ref|NP_005602.3| retinoblastoma-like protein 2 [Homo sapiens]
gi|116242746|sp|Q08999.3|RBL2_HUMAN RecName: Full=Retinoblastoma-like protein 2; AltName: Full=130 kDa
retinoblastoma-associated protein; Short=p130; AltName:
Full=Retinoblastoma-related protein 2; Short=RBR-2;
AltName: Full=pRb2
gi|453132|gb|AAB29227.1| p130 [Homo sapiens]
gi|119603208|gb|EAW82802.1| retinoblastoma-like 2 (p130), isoform CRA_b [Homo sapiens]
gi|739073|prf||2002264A Rb-related p130 protein
Length = 1139
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 416 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFEIYSQHFQ 475
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I ++ R + L YKVLE++ E + L +L+ + FHR +LA
Sbjct: 476 PDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLA 534
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 535 CCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 593
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S ++ +
Sbjct: 594 LDHLAWKPESPLWEKI 609
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LAAVR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 830 PRKTSSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 888
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 889 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 931
>gi|410227572|gb|JAA11005.1| retinoblastoma-like 2 (p130) [Pan troglodytes]
gi|410267036|gb|JAA21484.1| retinoblastoma-like 2 (p130) [Pan troglodytes]
gi|410298828|gb|JAA28014.1| retinoblastoma-like 2 (p130) [Pan troglodytes]
gi|410353057|gb|JAA43132.1| retinoblastoma-like 2 (p130) [Pan troglodytes]
Length = 1139
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 416 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFEIYSQHFQ 475
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I ++ R + L YKVLE++ E + L +L+ + FHR +LA
Sbjct: 476 PDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLA 534
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 535 CCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 593
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S ++ +
Sbjct: 594 LDHLAWKPESPLWEKI 609
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LAAVR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 830 PRKTSSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 888
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 889 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 931
>gi|119603207|gb|EAW82801.1| retinoblastoma-like 2 (p130), isoform CRA_a [Homo sapiens]
Length = 1067
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 344 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFEIYSQHFQ 403
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I ++ R + L YKVLE++ E + L +L+ + FHR +LA
Sbjct: 404 PDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLA 462
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 463 CCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 521
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S ++ +
Sbjct: 522 LDHLAWKPESPLWEKI 537
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LAAVR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 758 PRKTSSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 816
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 817 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 859
>gi|60654389|gb|AAX29885.1| retinoblastoma-like 2 [synthetic construct]
Length = 1140
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 416 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFEIYSQHFQ 475
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I ++ R + L YKVLE++ E + L +L+ + FHR +LA
Sbjct: 476 PDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLA 534
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 535 CCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 593
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S ++ +
Sbjct: 594 LDHLAWKPESPLWEKI 609
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LAAVR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 830 PRKTSSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 888
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 889 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 931
>gi|397148|emb|CAA52671.1| Rb2/p130 protein [Homo sapiens]
Length = 1082
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 359 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFEIYSQHFQ 418
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I ++ R + L YKVLE++ E + L +L+ + FHR +LA
Sbjct: 419 PDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLA 477
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 478 CCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 536
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S ++ +
Sbjct: 537 LDHLAWKPESPLWEKI 552
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LAAVR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 773 PRKTSSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 831
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 832 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 874
>gi|55727032|emb|CAH90273.1| hypothetical protein [Pongo abelii]
Length = 1097
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 373 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFEIYSQHFQ 432
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I ++ R + L YKVLE++ E + L +L+ + FHR +LA
Sbjct: 433 PDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLA 491
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 492 CCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 550
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S ++ +
Sbjct: 551 LDHLAWKPESPLWEKI 566
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LAAVR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 787 PRKTSSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 845
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 846 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 888
>gi|256075256|ref|XP_002573936.1| hypothetical protein [Schistosoma mansoni]
Length = 995
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 115/268 (42%), Gaps = 67/268 (25%)
Query: 374 INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILC 433
I I F + ++A++R+ + ERL L++++ ++ C ++ + T L + +DQ+I+C
Sbjct: 679 IAIFFRQTYQVASLRLRDLCERLSLTRELMAKIWT-CIEQVIVHETELLRDRCLDQVIMC 737
Query: 434 CFYGVAKISQLN-LTFKEIIYNYGKQPQCKPQVFRSVF------------DHVDIITFYN 480
C YG+ K+ LTF +I+ Y QPQ ++R V + D+ FYN
Sbjct: 738 CIYGICKLVLYRPLTFVDIVQVYRMQPQSYRDIYRRVLINRVSYGRGNTEERGDLSRFYN 797
Query: 481 KIFAPTVKPLLVELGPV-GTAMKTNRDSEVNHN-------------NDASVFPALPD--- 523
IF P +K + + V T +T+ + H+ N ++ P+L
Sbjct: 798 VIFLPQMKDFIKKAASVRSTYNETDPNCRTGHHSLGSDSTDDNTVLNQWTLHPSLSPMPM 857
Query: 524 --------------------------MSPKKVSATHSVYVSPLRTSEMDALISHSSKSYY 557
M +++++ ++++SP++ ++ S K
Sbjct: 858 LVNNLASNTAAALNLGFDPATTSGDIMQARRLASNRNIFISPVKQQ-----VNLSPKKVI 912
Query: 558 ACVGESTHAYSPFKDLTDINHRLNSNRR 585
VG ST KDL D+N ++S R
Sbjct: 913 FTVGRSTG-----KDLQDVNLMISSAER 935
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 12 ITGAKRKFDSLASPVKTITSPLSPHHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSA 71
++ + + D+L + + L +SS + T + A++ A+ + PL
Sbjct: 426 LSTIRERLDNLGEQFQRAYAGLKSVNSSGVTITSTTNNLAISAAQQRLQLCYPLYYMALE 485
Query: 72 DLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAK-NLTSL-----FHRCMLA 125
++ L+D I RR+E +L + Q+ + +LT+L FHR +
Sbjct: 486 NI----LLDEI----RRIEK-RLTTTTSLSSSNNSNQIRRTRPDLTTLLAQDTFHRALFI 536
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V+ + F +LE + + + KVI+ +R + LPRE+ ++LN + E +
Sbjct: 537 CCMEIVMLSCDPPNHHFPWILEALNLDSVQFYKVIEVLVRSLD-LPREIVKYLNQVVEFI 595
Query: 186 LESMVWEKGSSMYNSLTVARPALSAE 211
L+S W SS+++ L A S E
Sbjct: 596 LDSYAWRTNSSIWSVLKATGRAPSIE 621
>gi|355710195|gb|EHH31659.1| Retinoblastoma-related protein 2 [Macaca mulatta]
Length = 1139
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 416 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFEIYSQHFQ 475
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I ++ R + L YKVLE++ E + L +L+ + FHR +LA
Sbjct: 476 PDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLA 534
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 535 CCLEVVTFSYKPPGN-FPFITEIFEVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 593
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S ++ +
Sbjct: 594 LDHLAWKPESPLWEKI 609
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LAAVR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 830 PRKTSSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 888
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 889 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 931
>gi|383420483|gb|AFH33455.1| retinoblastoma-like protein 2 [Macaca mulatta]
gi|384948592|gb|AFI37901.1| retinoblastoma-like protein 2 [Macaca mulatta]
Length = 1141
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 416 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFEIYSQHFQ 475
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I ++ R + L YKVLE++ E + L +L+ + FHR +LA
Sbjct: 476 PDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLA 534
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 535 CCLEVVTFSYKPPGN-FPFITEIFEVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 593
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S ++ +
Sbjct: 594 LDHLAWKPESPLWEKI 609
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LAAVR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 830 PRKTSSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 888
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 889 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 931
>gi|355756774|gb|EHH60382.1| Retinoblastoma-related protein 2 [Macaca fascicularis]
Length = 1139
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 416 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFEIYSQHFQ 475
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I ++ R + L YKVLE++ E + L +L+ + FHR +LA
Sbjct: 476 PDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLA 534
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 535 CCLEVVTFSYKPPGN-FPFITEIFEVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 593
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S ++ +
Sbjct: 594 LDHLAWKPESPLWEKI 609
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LAAVR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 830 PRKTSSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 888
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 889 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 931
>gi|353233249|emb|CCD80604.1| putative retinoblastoma-like protein [Schistosoma mansoni]
Length = 1131
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 115/268 (42%), Gaps = 67/268 (25%)
Query: 374 INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILC 433
I I F + ++A++R+ + ERL L++++ ++ C ++ + T L + +DQ+I+C
Sbjct: 815 IAIFFRQTYQVASLRLRDLCERLSLTRELMAKIWT-CIEQVIVHETELLRDRCLDQVIMC 873
Query: 434 CFYGVAKISQLN-LTFKEIIYNYGKQPQCKPQVFRSVF------------DHVDIITFYN 480
C YG+ K+ LTF +I+ Y QPQ ++R V + D+ FYN
Sbjct: 874 CIYGICKLVLYRPLTFVDIVQVYRMQPQSYRDIYRRVLINRVSYGRGNTEERGDLSRFYN 933
Query: 481 KIFAPTVKPLLVELGPV-GTAMKTNRDSEVNHN-------------NDASVFPALPD--- 523
IF P +K + + V T +T+ + H+ N ++ P+L
Sbjct: 934 VIFLPQMKDFIKKAASVRSTYNETDPNCRTGHHSLGSDSTDDNTVLNQWTLHPSLSPMPM 993
Query: 524 --------------------------MSPKKVSATHSVYVSPLRTSEMDALISHSSKSYY 557
M +++++ ++++SP++ ++ S K
Sbjct: 994 LVNNLASNTAAALNLGFDPATTSGDIMQARRLASNRNIFISPVKQQ-----VNLSPKKVI 1048
Query: 558 ACVGESTHAYSPFKDLTDINHRLNSNRR 585
VG ST KDL D+N ++S R
Sbjct: 1049 FTVGRSTG-----KDLQDVNLMISSAER 1071
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 16/202 (7%)
Query: 16 KRKFDSLASPVKTITSPLSPHHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSADLQG 75
+ + D+L + + L +SS + T + A++ A+ + PL ++
Sbjct: 430 RERLDNLGEQFQRAYAGLKSVNSSGVTITSTTNNLAISAAQQRLQLCYPLYYMALENI-- 487
Query: 76 ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAK-NLTSL-----FHRCMLACSAE 129
L+D I RR+E +L + Q+ + +LT+L FHR + C E
Sbjct: 488 --LLDEI----RRIEK-RLTTTTSLSSSNNSNQIRRTRPDLTTLLAQDTFHRALFICCME 540
Query: 130 LVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESM 189
+V+ + F +LE + + + KVI+ +R + LPRE+ ++LN + E +L+S
Sbjct: 541 IVMLSCDPPNHHFPWILEALNLDSVQFYKVIEVLVRSLD-LPREIVKYLNQVVEFILDSY 599
Query: 190 VWEKGSSMYNSLTVARPALSAE 211
W SS+++ L A S E
Sbjct: 600 AWRTNSSIWSVLKATGRAPSIE 621
>gi|297283996|ref|XP_002802522.1| PREDICTED: retinoblastoma-like protein 2-like [Macaca mulatta]
Length = 1072
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 349 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFEIYSQHFQ 408
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I ++ R + L YKVLE++ E + L +L+ + FHR +LA
Sbjct: 409 PDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLA 467
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 468 CCLEVVTFSYKPPGN-FPFITEIFEVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 526
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S ++ +
Sbjct: 527 LDHLAWKPESPLWEKI 542
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LAAVR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 763 PRKTSSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 821
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 822 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 864
>gi|221044944|dbj|BAH14149.1| unnamed protein product [Homo sapiens]
Length = 518
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 200 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFEIYSQHFQ 259
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I ++ R + L YKVLE++ E + L +L+ + FHR +LA
Sbjct: 260 PDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLA 318
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 319 CCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 377
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S ++ +
Sbjct: 378 LDHLAWKPESPLWEKI 393
>gi|194390190|dbj|BAG61857.1| unnamed protein product [Homo sapiens]
Length = 554
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 42/213 (19%)
Query: 29 ITSPLSP-HHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------------ 75
I++PL+ + + VTPVSTA + L T++ L + PS L+
Sbjct: 325 ISTPLTGVRYIKENSPCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQA 384
Query: 76 ----------------------ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAK 113
+N I ++ R + L YKVLE++ E + L
Sbjct: 385 IANRLKEMFEIYSQHFQPDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDM 443
Query: 114 NLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEE 168
+L+ + FHR +LAC E+V ++K F + E + ++ KVI+ FIR E+
Sbjct: 444 DLSGILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAED 502
Query: 169 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
L RE+ +HLN +EE++L+ + W+ S ++ +
Sbjct: 503 GLCREVVKHLNQIEEQILDHLAWKPESPLWEKI 535
>gi|198437827|ref|XP_002124769.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 1023
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 108/264 (40%), Gaps = 64/264 (24%)
Query: 360 SNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRT 419
+N +P + + F K+ LA+VR+ + E+L + +R ++
Sbjct: 731 ANHADNVKPRKTGSLALFFRKVYHLASVRLRHLCEQLVIPPDLRAKIWTCFEYSVSKHAY 790
Query: 420 SLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVFDHV------ 473
SL + HIDQ+++C Y +AKI+Q + +F+EI+ Y QPQ V+R+V H
Sbjct: 791 SLMRDRHIDQMLMCAVYVIAKITQHDHSFQEIMRCYRSQPQATSNVYRNVLIHRSSSPRL 850
Query: 474 -------------------------------------DIITFYNKIFAPTVKPLLVELGP 496
D+I FYNK++ P ++ +
Sbjct: 851 IPAQPPSRSMRSNSTIPRSDPSSPLPGSTGGGDGERDDLIQFYNKVYVPVMREYV----- 905
Query: 497 VGTAMKTNRDSEVNHNN---DASVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSS 553
K +V+H P + SP+KV T ++Y+SPL+ + L++ ++
Sbjct: 906 -----KKFNSGDVSHLEVPLSPMPRPRILPQSPRKV--TDNIYISPLKNPSL--LMATNT 956
Query: 554 KSYYACVGESTHAYSPFKDLTDIN 577
+ + SP K L DIN
Sbjct: 957 DRHL----DYNFHRSPAKRLRDIN 976
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 7/124 (5%)
Query: 84 AEQRRLEALKLNYKVLETMCTAEAQVLHAK-NLTSL-----FHRCMLACSAELVLATHKT 137
AEQR A L Y +LE E + L+ K +L+ L FH + AC E+VL ++K
Sbjct: 478 AEQRATMATVLYYHILEGSMIQEKKRLNGKSDLSELLKRDDFHTLLFACCVEIVLCSYKA 537
Query: 138 VTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSM 197
M F +L + ++ + KVI+ IR E+ L +HLN +EE++LES+ W+ S++
Sbjct: 538 ERM-FPWILSALDLSPYYFYKVIELVIRAEDGLWGPCIKHLNHIEEQILESLAWKSDSTL 596
Query: 198 YNSL 201
+ L
Sbjct: 597 WQVL 600
>gi|354471659|ref|XP_003498058.1| PREDICTED: retinoblastoma-like protein 2 [Cricetulus griseus]
gi|344235903|gb|EGV92006.1| Retinoblastoma-like protein 2 [Cricetulus griseus]
Length = 1136
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 39/195 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG-------------ANLMDNIW-------- 83
VTPVSTA + L T++ L + PS L+ AN + ++
Sbjct: 414 VTPVSTAAYSLSRLHTMLSGLRNAPSERLEQILRTCSRDPTQAIANRLKEMYEIYSQHFQ 473
Query: 84 ------------AEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLAC 126
A + A L YKVLE++ E + L +L+ + FHR +LAC
Sbjct: 474 PDEDFSNCSKEIANKYFRFAEMLYYKVLESIIEQEQKRLGDMDLSGVLEQDAFHRSLLAC 533
Query: 127 SAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLL 186
E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++L
Sbjct: 534 CLEVVAFSYKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQIL 592
Query: 187 ESMVWEKGSSMYNSL 201
+ + W+ S +++ +
Sbjct: 593 DHLAWKTESPLWDRI 607
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 380 KINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVA 439
K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L + H+DQ+++C Y +A
Sbjct: 838 KVYHLAGVRLRDLCTKLDISDELRKKIWT-CFEFSIIQCPELMMDRHLDQLLMCAIYVMA 896
Query: 440 KISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
K+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 897 KVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 927
>gi|126296327|ref|XP_001372085.1| PREDICTED: retinoblastoma-like protein 2 [Monodelphis domestica]
Length = 1145
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 39/195 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG-------------ANLMDNIW-------- 83
VTPVS A + L T++ L + PS L+ AN + ++
Sbjct: 423 VTPVSIATHSLSRLHTMLAGLKNSPSEKLEQVLRACTRDPTQSIANRLKEMYEIYCQHSQ 482
Query: 84 ------------AEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLAC 126
A + A L YKVLE++ E + L +L+ + FHR +LAC
Sbjct: 483 ADGDFNSCAKEIASKHFRYAEILYYKVLESVIDQEQKRLGDIDLSGILEQDAFHRSLLAC 542
Query: 127 SAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLL 186
E++ ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++L
Sbjct: 543 CLEVITFSYKPPGN-FPFIAEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNHIEEQIL 601
Query: 187 ESMVWEKGSSMYNSL 201
+ M W+ S +++ +
Sbjct: 602 DHMAWKPESPLWDRI 616
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 68/115 (59%), Gaps = 2/115 (1%)
Query: 357 PTRSN-PGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTL 415
P R N P P + +++ F K+ LA+VR+ + +L +S ++R+ ++ C + ++
Sbjct: 824 PQRQNQPLTSIRPRKTSSLSLFFRKVYHLASVRLRDLCAKLDISDELRKKIWT-CFEFSV 882
Query: 416 NQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
Q L + H+DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 883 VQCPELMMDRHLDQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 937
>gi|395505952|ref|XP_003757300.1| PREDICTED: retinoblastoma-like protein 2 [Sarcophilus harrisii]
Length = 1059
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 66/113 (58%), Gaps = 6/113 (5%)
Query: 94 LNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLER 148
L YKVLE++ E + L +L+ + FHR +LAC E++ ++K F + E
Sbjct: 419 LYYKVLESVIDQEQKRLGDIDLSGILEQDAFHRSLLACCLEVITFSYKPPGN-FPFIAEI 477
Query: 149 IGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
+ ++ KVI+ FIR E+ L RE+ +HLN +EE++L+ M W+ S +++ +
Sbjct: 478 FDVPLYHFYKVIEVFIRAEDGLCREVVKHLNHIEEQILDHMAWKPESPLWDRI 530
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LA+VR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 750 PKKTSSLSLFFRKVYHLASVRLRDLCAKLDISDELRKKIWT-CFEFSVVQCPELMMDRHL 808
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 809 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 851
>gi|332227839|ref|XP_003263100.1| PREDICTED: retinoblastoma-like protein 2 [Nomascus leucogenys]
Length = 1082
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LAAVR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 773 PRKTSSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 831
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 832 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 874
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 359 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRNPTQAIANRLKEMFEIYSQHFQ 418
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I ++ R + L YKVLE++ E + L +L+ + FHR +LA
Sbjct: 419 PDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLA 477
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V ++K F E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 478 CCLEVVTFSYKPPGN-FPFTTEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 536
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S ++ +
Sbjct: 537 LDHLAWKPESPLWEKI 552
>gi|31873726|emb|CAD97830.1| hypothetical protein [Homo sapiens]
Length = 849
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LAAVR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 540 PRKTSSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 598
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 599 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 641
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
Query: 68 KPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRC 122
+P D +N I ++ R + L YKVLE++ E + L +L+ + FHR
Sbjct: 185 QPDEDF--SNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRS 241
Query: 123 MLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLE 182
+LAC E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +E
Sbjct: 242 LLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIE 300
Query: 183 ERLLESMVWEKGSSMYNSL 201
E++L+ + W+ S ++ +
Sbjct: 301 EQILDHLAWKPESPLWEKI 319
>gi|328768353|gb|EGF78400.1| hypothetical protein BATDEDRAFT_90881 [Batrachochytrium
dendrobatidis JAM81]
Length = 1124
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Query: 375 NICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQ-RTSLFFNCHIDQIILC 433
+ F KI KLA R + + ++L I + L N+ L N H+D I++
Sbjct: 840 QVIFGKILKLAYTRFVQLTKAMRLQTHIVNMAWRLFDALICNETHLQLLLNRHLDTIMIT 899
Query: 434 CFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-----DHVDIITFYNKIFAPTVK 488
C + + +TF+E++ +Y QPQ VF V+ DI+ FYNK+F P +K
Sbjct: 900 CIFTYCRFENTPVTFRELLESYNLQPQFMDSVFTQVYMEGEERGCDIVKFYNKVFVPCIK 959
Query: 489 PLLVELGPV 497
LL L P+
Sbjct: 960 SLLPVLTPL 968
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 80 DNIWAEQRRLEALKLNYKVLETMCTA--EAQVLHAKNLTSLFHRCMLACSAELVLATHKT 137
D+ W RL A L + + C+ E+Q A + S FHR M+A + E+V T
Sbjct: 654 DHAWLLGARLYA-ALASDIAKKGCSRPYESQARLASD--SQFHRAMMAVAYEMVRETFNI 710
Query: 138 VTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
T +L+ + I +L+ I ++ +P L + L +EERLLE+ +W
Sbjct: 711 STKT-QNILDGLDIHVVDLALGIDLVVKTHVWIPDSLVKRLKQIEERLLETDIW 763
>gi|298715379|emb|CBJ27990.1| Putative retinoblastoma [Ectocarpus siliculosus]
Length = 1298
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 6/134 (4%)
Query: 70 SADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSLF-----HRCML 124
S D +G++L + + ++ +A L Y LE + AE + L +++ + L H+ +L
Sbjct: 618 SLDARGSDLEAGVVGDAKK-KAEALYYSTLEVLLDAETERLSSEDHSRLLEQETLHKALL 676
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E VL +++ F VL R+ I A +L KV++SF R LP L+ HL ++
Sbjct: 677 ACCLEAVLKASSLLSLTFPWVLRRMDIDALDLCKVLESFARFCPGLPMNLKYHLFEVQTE 736
Query: 185 LLESMVWEKGSSMY 198
++E + E G+ ++
Sbjct: 737 IVERLALEAGAGVF 750
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 36/156 (23%)
Query: 374 INICFCKINKLAAVRINAM-VERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIIL 432
+++ F ++ K AA + + + RL L + V+ + KR + QRT + + H+ +IL
Sbjct: 866 LDLFFRRLMKRAAEVVAELCLRRLHLPGDTADQVWTVI-KRCVAQRTEILKDRHLHHVIL 924
Query: 433 CCFYGVAKISQL--NLTFKEIIYNYGKQPQC------------KPQVFRSVF-------- 470
C Y V K++ + +TFK II Y + + V + +
Sbjct: 925 CSTYSVCKVNGVTPEVTFKRIIEQYKQLAGAGGGGLSGGVGTPRLSVVKDILLKRGHDEE 984
Query: 471 ------------DHVDIITFYNKIFAPTVKPLLVEL 494
+ DII FYNK++ P +K ++E
Sbjct: 985 AGGEGAGEPQQEERGDIIKFYNKVYIPAMKQFVLEF 1020
>gi|194768441|ref|XP_001966320.1| GF22059 [Drosophila ananassae]
gi|190617084|gb|EDV32608.1| GF22059 [Drosophila ananassae]
Length = 854
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 118/271 (43%), Gaps = 41/271 (15%)
Query: 348 SKPLPPPLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVY 407
S PLP L R+ G E I K+ LA +RI + L L E ++
Sbjct: 564 SSPLPTSLDVNRNRTAGPLE--------IFLRKLYLLAWLRIQKLCSELGLCDP--ERIW 613
Query: 408 CLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQL-NLTFKEIIYNYGKQPQCKPQVF 466
+ + ++ T L + H+DQ I+C Y ++ ++ + F +I+ Y QPQ V+
Sbjct: 614 HIF-EHSITHETDLMKDRHLDQNIMCAIYIYIRVKRMEDPKFSDIMRAYRNQPQAVNSVY 672
Query: 467 RSVFDHV---------DIITFYNKIFAPTVKPLLV---ELGPVGTAMKTNRDSEVNHNND 514
R V V DII FYN I+ P +K + + P + T S++
Sbjct: 673 REVLIGVNEDGEPKVKDIIYFYNHIYVPAIKKFAIGHLSMTPDVSGGCTISSSDLL---- 728
Query: 515 ASVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLT 574
S P PKKV+ HS+YVS + +E+ + +Y +SP K+L
Sbjct: 729 LSPHPKERAAQPKKVTQNHSLYVSQMSKNEIQQSPNQIVYRFY---------HSPAKELQ 779
Query: 575 DINHRLNSNRRVRGALNFDDVDVDVGLVSDS 605
+N ++ +R+ L+F D D G V+++
Sbjct: 780 LMNEKVRGGKRM---LSFGD-DPTPGTVTET 806
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 118 LFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRH--EESLPRELR 175
+F+ ++AC ELVL +KT F VLE + I++F K+I+ +RH L R L
Sbjct: 475 IFNITLMACCVELVLEAYKTEAYKFPWVLECLSISSFEFQKIIEIVVRHGSHGCLTRSLI 534
Query: 176 RHLNSLEERLLESMVWEKGSSMYNSLTVARPALSAEINLG 215
+HLNS+EE LE + W S ++ ++ A L +++
Sbjct: 535 KHLNSVEETCLEQLAWVSNSPLWTMISSASSPLPTSLDVN 574
>gi|443696074|gb|ELT96854.1| hypothetical protein CAPTEDRAFT_120947 [Capitella teleta]
Length = 754
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 80/155 (51%), Gaps = 4/155 (2%)
Query: 47 PVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAE 106
P M K + C ++PS D G+++ +A++R L +K LE + E
Sbjct: 417 PHEDIMARVKEMGETFCERYAQPSDDHPGSHV---DFAKKRLQLGESLYFKALENVMKNE 473
Query: 107 AQVLHAKNLTSLFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRH 166
+ +FHR + A E+V+ ++ + F +++ + ++ KVI+ +R
Sbjct: 474 MKRKQNLLEQDIFHRSLFASCLEIVIFSYNS-QRAFPWIIDVFNLDPYHFYKVIEVLVRA 532
Query: 167 EESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
EE L R++ +H+N +EE +L+S+ W+ GS +++++
Sbjct: 533 EEGLSRDVVKHMNHIEELILDSLAWKDGSMLWDAI 567
>gi|444725591|gb|ELW66152.1| Retinoblastoma-like protein 2 [Tupaia chinensis]
Length = 1056
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 764 PRKTSSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 822
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 823 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 865
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 21/163 (12%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCT 104
VTPVSTA + L T++ L + PS L+ + Q LK Y++
Sbjct: 397 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQTIANRLKEMYEIYSQHSQ 456
Query: 105 AEAQVLHAKNLTSLFHRCMLACSAELVLATHKTVTMLFLAVLERI------GITAFNLSK 158
++ ++ S E+ + ML+ VLE + + +LS
Sbjct: 457 SDEDFNNS--------------SKEIASKHFRFAEMLYYKVLESVIEQEQKRLGDMDLS- 501
Query: 159 VIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
VI+ FIR E+ L RE+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 502 VIEVFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWDRI 544
>gi|194745039|ref|XP_001955000.1| GF18553 [Drosophila ananassae]
gi|190628037|gb|EDV43561.1| GF18553 [Drosophila ananassae]
Length = 786
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 27/225 (12%)
Query: 305 FNFQFYANCYGELVTDDYRSVL--VERNNFTSLVKDCLLGLNNLKSKPLPPPLYPTRSN- 361
F F +CY L D++ +L V R++ L ++ + L+ L+ + L ++ S
Sbjct: 484 LKFPFILDCYS-LEAYDFQKILEVVVRHDQGLLGRELVKHLHALEEECLGSLIFRKNSQL 542
Query: 362 ----------PG-----GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESV 406
PG G+ A TG IC K +LA R+ + + + L +
Sbjct: 543 WRSFGKALHLPGYQDVQAEGKENASTGAEICLRKFYELAKRRLFVLCQSIGLVDNF-ARI 601
Query: 407 YCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVF 466
+ L + L +DQ++LC + A++ +L LTF II +Y +QP + V+
Sbjct: 602 WHLAEHSFTTKGGQLLRQRSVDQLLLCAIHLHARLEELRLTFSAIIQHYRRQPHARSSVY 661
Query: 467 RSVF----DHVDIITFYNKIFAPTVKP---LLVELGPVGTAMKTN 504
R+V DII FYN+I+ T+ LL P+G +K +
Sbjct: 662 RAVAMNDGQTGDIIRFYNRIYVRTMGTFGRLLHCQEPLGNKLKKD 706
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 69/129 (53%), Gaps = 8/129 (6%)
Query: 84 AEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTV 138
A++R A L YK+++ + T+E + ++ L + +LAC E+ L H
Sbjct: 421 ADERFRLASGLYYKLIDKIVTSEIALKPWLKISKLIKQPTLNETLLACCLEVALHVHHED 480
Query: 139 T--MLFLAVLERIGITAFNLSKVIQSFIRHEESL-PRELRRHLNSLEERLLESMVWEKGS 195
+ F +L+ + A++ K+++ +RH++ L REL +HL++LEE L S+++ K S
Sbjct: 481 VDGLKFPFILDCYSLEAYDFQKILEVVVRHDQGLLGRELVKHLHALEEECLGSLIFRKNS 540
Query: 196 SMYNSLTVA 204
++ S A
Sbjct: 541 QLWRSFGKA 549
>gi|402908378|ref|XP_003916920.1| PREDICTED: retinoblastoma-like protein 2 [Papio anubis]
Length = 1139
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 416 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFEIYSQHFQ 475
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I ++ R + L YKVLE + E + L +L+ + FHR +LA
Sbjct: 476 PDEDFSNCAKEIASKHFRFAEM-LYYKVLECVIEQEQKRLGDMDLSVILEQDAFHRSLLA 534
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 535 CCLEVVTFSYKPPGN-FPFITEIFEVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 593
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S ++ +
Sbjct: 594 LDHLAWKPESPLWEKI 609
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LAAVR+ + +L +S +R+ ++ C + ++ Q L + H+
Sbjct: 830 PRKTSSLSLFFRKVYHLAAVRLRDLCAKLDISDDLRKKIWT-CFEFSIIQCPELMMDRHL 888
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 889 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 931
>gi|270009799|gb|EFA06247.1| hypothetical protein TcasGA2_TC009105 [Tribolium castaneum]
Length = 872
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 102/257 (39%), Gaps = 39/257 (15%)
Query: 347 KSKPLP-PPLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQ-QIRE 404
KS P+P P R P G++I F K L+ R+ + L+++ +
Sbjct: 596 KSTPVPVQQTTPQRQENVAQARPRRTGGVSIVFRKFYNLSGERMEHLCTHLKITNTDTKR 655
Query: 405 SVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQ 464
++ + + L + ++DQ+++C Y + K+++LN F EII +Y QPQ
Sbjct: 656 KIWTVFEELVRKNHCELMKDRNLDQLLMCAVYMICKLTKLNKNFTEIIKSYRSQPQATSD 715
Query: 465 VFRSVF------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRD 506
++R+V + D+I FYNK+ +K + G
Sbjct: 716 IYRNVLISSKKVVVVDGETTEIPEEWGDLIQFYNKVIIQAMKKFAQKFVVRG-------- 767
Query: 507 SEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHA 566
N + LP + V ++++ PL + + + +YY +
Sbjct: 768 ---EENIGDILLSPLPASRGQVVQVFDNIFIKPLESPTL-TFGNGKVLNYY-------FS 816
Query: 567 YSPFKDLTDINHRLNSN 583
SP KDL DIN + N
Sbjct: 817 RSPSKDLKDINKAIRGN 833
>gi|335308327|ref|XP_003361185.1| PREDICTED: retinoblastoma-like protein 2, partial [Sus scrofa]
Length = 480
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L + H
Sbjct: 170 RPRKTSSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRH 228
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
+DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 229 LDQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 272
>gi|47222555|emb|CAG02920.1| unnamed protein product [Tetraodon nigroviridis]
Length = 581
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 22/130 (16%)
Query: 84 AEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTV 138
QR +KL YK++E M +E + L +N + L FH +LAC+ E+V+AT+
Sbjct: 436 GRQRFNLGVKLYYKIMEAMLKSEEKRLSVQNFSKLLNDSTFHTSLLACALEVVMATYGES 495
Query: 139 T-----------------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSL 181
+ M F +L+ + + AF+ KVI+SFI+ + +L +++ +HL +
Sbjct: 496 SFKTGGYNQGSGDAAERNMCFPWILDVVNLAAFDFYKVIESFIKADPTLSKDIVKHLETC 555
Query: 182 EERLLESMVW 191
E ++E + W
Sbjct: 556 ENLIMERIAW 565
>gi|149032674|gb|EDL87544.1| retinoblastoma-like 2, isoform CRA_c [Rattus norvegicus]
Length = 951
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 39/195 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQGA----------------NLMDNIWAEQRR 88
VTPVSTA + L T++ L + PS L+ M I+++ +
Sbjct: 229 VTPVSTATHSLNRLHTMLAGLRNAPSEKLEQILRSCSRDPTRAIADRLREMYEIYSQHFQ 288
Query: 89 LE-----------------ALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLAC 126
+ A L YKVLE++ E + L +L+ + FH+ +LAC
Sbjct: 289 PDENVSNCAKEMANKHFRFAEMLYYKVLESVIEQEQKRLGDMDLSGVLEQDAFHKSLLAC 348
Query: 127 SAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLL 186
E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++L
Sbjct: 349 CLEVVAFSYKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQIL 407
Query: 187 ESMVWEKGSSMYNSL 201
+ + W+ S +++ +
Sbjct: 408 DHLAWKTKSPLWDRI 422
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 642 PRKTSSLSLFFRKVYYLAGVRLRDLCTKLDISDELRKKIWT-CFEFSIVQCPELMMDRHL 700
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 701 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 743
>gi|13592041|ref|NP_112356.1| retinoblastoma-like protein 2 [Rattus norvegicus]
gi|6685833|sp|O55081.1|RBL2_RAT RecName: Full=Retinoblastoma-like protein 2; AltName: Full=130 kDa
retinoblastoma-associated protein; Short=p130; AltName:
Full=PPAR-alpha-interacting complex protein 128;
Short=PRIC128; AltName: Full=Retinoblastoma-related
protein 2; Short=RBR-2; AltName: Full=pRb2
gi|2760811|dbj|BAA24196.1| p130 [Rattus norvegicus]
Length = 1135
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 39/195 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQGA----------------NLMDNIWAEQRR 88
VTPVSTA + L T++ L + PS L+ M I+++ +
Sbjct: 413 VTPVSTATHSLNRLHTMLAGLRNAPSEKLEQILRSCSRDPTRAIADRLREMYEIYSQHFQ 472
Query: 89 LE-----------------ALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLAC 126
+ A L YKVLE++ E + L +L+ + FH+ +LAC
Sbjct: 473 PDENVSNCAKEMANKHFRFAEMLYYKVLESVIEQEQKRLGDMDLSGVLEQDAFHKSLLAC 532
Query: 127 SAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLL 186
E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++L
Sbjct: 533 CLEVVAFSYKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQIL 591
Query: 187 ESMVWEKGSSMYNSL 201
+ + W+ S +++ +
Sbjct: 592 DHLAWKTKSPLWDRI 606
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 826 PRKTSSLSLFFRKVYYLAGVRLRDLCTKLDISDELRKKIWT-CFEFSIVQCPELMMDRHL 884
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 885 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 927
>gi|349605539|gb|AEQ00742.1| Retinoblastoma-like protein 2-like protein, partial [Equus
caballus]
Length = 481
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L + H
Sbjct: 170 RPRKTSSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRH 228
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
+DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 229 LDQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 272
>gi|149032672|gb|EDL87542.1| retinoblastoma-like 2, isoform CRA_a [Rattus norvegicus]
Length = 1135
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 39/195 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQGA----------------NLMDNIWAEQRR 88
VTPVSTA + L T++ L + PS L+ M I+++ +
Sbjct: 413 VTPVSTATHSLNRLHTMLAGLRNAPSEKLEQILRSCSRDPTRAIADRLREMYEIYSQHFQ 472
Query: 89 LE-----------------ALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLAC 126
+ A L YKVLE++ E + L +L+ + FH+ +LAC
Sbjct: 473 PDENVSNCAKEMANKHFRFAEMLYYKVLESVIEQEQKRLGDMDLSGVLEQDAFHKSLLAC 532
Query: 127 SAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLL 186
E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++L
Sbjct: 533 CLEVVAFSYKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQIL 591
Query: 187 ESMVWEKGSSMYNSL 201
+ + W+ S +++ +
Sbjct: 592 DHLAWKTKSPLWDRI 606
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 826 PRKTSSLSLFFRKVYYLAGVRLRDLCTKLDISDELRKKIWT-CFEFSIVQCPELMMDRHL 884
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 885 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 927
>gi|405964992|gb|EKC30423.1| Retinoblastoma-like protein 1 [Crassostrea gigas]
Length = 1073
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 13/170 (7%)
Query: 41 SKMVVTPVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLE 100
S++ P + M + I C K + D G+ + +A++R L YK+LE
Sbjct: 530 SEIGTDPKTRIMERVTEMGEIFCAHYVKETDDHAGSQI---DFAKKRLQLGECLYYKLLE 586
Query: 101 TMCTAEAQVLHAKNLTS---------LFHRCMLACSAELVLATHKTVTMLFLAVLERIGI 151
++ E + +K + +FHR + AC E+V+ ++ + F ++E +
Sbjct: 587 SILYTEKKRNDSKEGKAALATLMEQDIFHRTLFACCLEIVIFSYNS-QRSFPWIVEIFNL 645
Query: 152 TAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
+ ++ KVI+ IR EE R++ +HLN +EE +LES+ W+ S +++++
Sbjct: 646 SPYHFYKVIEIIIRTEEGFSRDVVKHLNHIEESILESLAWKSESPLWDAI 695
>gi|157112868|ref|XP_001657652.1| P130 [Aedes aegypti]
gi|108884618|gb|EAT48843.1| AAEL000128-PA, partial [Aedes aegypti]
Length = 748
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 30/190 (15%)
Query: 370 AETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQ 429
+N+ F K AA+R+ + L LS + ++ + +N L + H+DQ
Sbjct: 553 GNASLNLFFRKYYATAALRLKHLCAHLNLSSRAMVEIWTIFEHSVVNSSKELIRDRHLDQ 612
Query: 430 IILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---------DHVDIITFYN 480
+++C Y A+I + TF +++ Y PQ V+RSVF + DII FYN
Sbjct: 613 MVMCSIYLYARIKRDTRTFADVMKAYRTLPQSYSHVYRSVFISRKSHGDEERGDIIRFYN 672
Query: 481 KIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPD-------MSPKKVSATH 533
++ ++ + + G N + + LP SPKKV
Sbjct: 673 TVYITEMQSVATQFG--------------NEEGRSLMLSPLPKTTNRCLLQSPKKVDNRI 718
Query: 534 SVYVSPLRTS 543
S+Y++P+ S
Sbjct: 719 SLYLTPMDKS 728
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 71/134 (52%), Gaps = 11/134 (8%)
Query: 78 LMDNIWAEQ---RRLEALK-LNYKVLETMCTAEAQ---VLHAKNL--TSLFHRCMLACSA 128
+ D W+ Q R E ++ L Y++LE + AE + V K L +F++ +L CSA
Sbjct: 401 MHDQKWSRQAIASRWEKIQTLYYRLLEFIIRAEVKRTKVNMVKELCCEDMFNQTLLVCSA 460
Query: 129 ELVLATHKTVTMLFLAVLERIGITAFNLSKVIQ-SFIRHEESLPRELRRHLNSLEERLLE 187
E+V H + F +L+ + F ++I+ + H + L RE+ +HL+ +E + +E
Sbjct: 461 EIVTFAH-NLQQNFPCILKVFDMPPFIFYRIIELVMMHHNDLLSREITKHLDIIENQCIE 519
Query: 188 SMVWEKGSSMYNSL 201
S+ W+ S ++ ++
Sbjct: 520 SLCWQSNSPLWRAM 533
>gi|301611245|ref|XP_002935161.1| PREDICTED: retinoblastoma-associated protein-like [Xenopus
(Silurana) tropicalis]
Length = 875
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 15/130 (11%)
Query: 91 ALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT------ 139
++L Y+V+E + E + L N + L FH C+LAC+ E+V+ ++ T
Sbjct: 400 GVRLYYRVMEAILKTEEERLSVHNFSKLLNNDIFHMCLLACAVEVVIDSYTRNTAQAYFS 459
Query: 140 ----MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGS 195
+ F +L I AF+ KVI+ FI+ E SL ++ ++L E +++ES+ W+ S
Sbjct: 460 SRTNLSFPWILRVFEIKAFDFYKVIECFIKAEPSLTSDMIKYLERCEHQIMESLAWQSDS 519
Query: 196 SMYNSLTVAR 205
+++ + R
Sbjct: 520 PLFDLIRQTR 529
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 98/228 (42%), Gaps = 31/228 (13%)
Query: 372 TGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQII 431
T +++ + K+ LA R++++ L E V + TL L + H+DQI+
Sbjct: 594 TSLSLFYKKVYLLAYKRLSSLCSSLLSDHPELEQVIWTLLQHTLQHEYELMRDRHLDQIM 653
Query: 432 LCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKIFAPTV 487
+C YG+ K ++L FK I+ Y + F+ V H II FYN +F +
Sbjct: 654 MCSMYGICKAKNIDLRFKTIVTAYKGLTNTNQETFKHVLIRDGQHDSIIVFYNLVFMQKL 713
Query: 488 KPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSAT----HSVYVSPLRT- 542
K +++ G + S P +P SP + + ++YVSPL+T
Sbjct: 714 KSHILQYGSA-------------RHPTLSPIPHIP-RSPYRFGNSPKVPGNIYVSPLKTP 759
Query: 543 -SEMDALISHS----SKSYYACVGESTHAYSPFKDLTDINHRLNSNRR 585
D L+S S S+ +GE+ + F+ IN LNS R
Sbjct: 760 YKTTDGLLSPSKMTPKTSFLISLGETFRSPDRFQ---KINQMLNSCER 804
>gi|149032673|gb|EDL87543.1| retinoblastoma-like 2, isoform CRA_b [Rattus norvegicus]
Length = 908
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 39/195 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQGA----------------NLMDNIWAEQRR 88
VTPVSTA + L T++ L + PS L+ M I+++ +
Sbjct: 186 VTPVSTATHSLNRLHTMLAGLRNAPSEKLEQILRSCSRDPTRAIADRLREMYEIYSQHFQ 245
Query: 89 LE-----------------ALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLAC 126
+ A L YKVLE++ E + L +L+ + FH+ +LAC
Sbjct: 246 PDENVSNCAKEMANKHFRFAEMLYYKVLESVIEQEQKRLGDMDLSGVLEQDAFHKSLLAC 305
Query: 127 SAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLL 186
E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++L
Sbjct: 306 CLEVVAFSYKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQIL 364
Query: 187 ESMVWEKGSSMYNSL 201
+ + W+ S +++ +
Sbjct: 365 DHLAWKTKSPLWDRI 379
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 599 PRKTSSLSLFFRKVYYLAGVRLRDLCTKLDISDELRKKIWT-CFEFSIVQCPELMMDRHL 657
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 658 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 700
>gi|290981592|ref|XP_002673514.1| retinoblastoma protein [Naegleria gruberi]
gi|284087098|gb|EFC40770.1| retinoblastoma protein [Naegleria gruberi]
Length = 733
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Query: 85 EQRRLEALKLNYKVLETMCTAEAQVLHA-KNLTSL-----FHRCMLACSAELV-LATHKT 137
E+R+ E +K+ Y L+ M E + L N ++L FHR + CS E V A +
Sbjct: 281 EKRKQEIMKIYYGTLKHMLQGEEKRLSGTANFSTLLTNENFHRSLTICSIECVSFAYNSK 340
Query: 138 VTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSM 197
T+ +L + F LS V++SF+++ L L+R S+EE LL+S+ W+K S +
Sbjct: 341 DTIDLQVLLNEFVLEPFELSIVLESFVQNATWLNSALKRQFKSIEEVLLDSLAWKKNSVL 400
Query: 198 YNSLTVA 204
Y+ L+ +
Sbjct: 401 YSKLSTS 407
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 124/295 (42%), Gaps = 54/295 (18%)
Query: 345 NLKSKPLPPPLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINA------------- 391
N++S + P+ + P P + F K+ KL + RI
Sbjct: 425 NIESFGMYSPMASRKQQPQSA--PKGSYSVLFFFRKMYKLVSRRIQELCYHFNQTQQSNS 482
Query: 392 ---MVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVA-KISQLNLT 447
M+ + L +++ +VY + LN+ L + H+D II+C Y + K++++ ++
Sbjct: 483 EEPMIISMDLMEEVWHTVYYV-----LNEARGLMVSRHVDHIIMCSMYAICNKVNRMRIS 537
Query: 448 FKEIIYNY---------------GKQPQCKPQVFRSVFDHVDIITFYNKIFAPTVKPLLV 492
FK+IIYNY GK P D DI+ FYN ++ P+VK ++
Sbjct: 538 FKDIIYNYRIICENIRMISPVEIGKILWQVP--LDKEGDLGDIVKFYNLVYIPSVKGFIL 595
Query: 493 ELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRTSE---MDALI 549
+ G A+ V + P +SP+K + + + +SP+R + L+
Sbjct: 596 D-KTSGAALDRPEMPYVEIFTKTKIAPNFV-LSPRKSNYSKNSLLSPMRHQDNYHTTLLL 653
Query: 550 SHSSKSYYACVGESTHAY------SPFKDLTD--INHRLNSNRRVRGALNFDDVD 596
+ +K+ Y ST + +P ++ T IN+ S R V+ L+F D
Sbjct: 654 TPRTKALYEFGTNSTKKHFDQISTTPNRESTSSVINNSDISKRGVKRTLDFGGDD 708
>gi|195040219|ref|XP_001991027.1| GH12452 [Drosophila grimshawi]
gi|193900785|gb|EDV99651.1| GH12452 [Drosophila grimshawi]
Length = 818
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 109/262 (41%), Gaps = 49/262 (18%)
Query: 348 SKPLPPPLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVY 407
+ PLPP + G + I KI +L RI + L L + E ++
Sbjct: 556 ANPLPPYMEVCEGRTAGP--------LQIFLRKIYQLGWARILTLCNELNLGETKAEKIW 607
Query: 408 CLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQ-LNLTFKEIIYNYGKQPQCKPQVF 466
+ + ++ + L + H+DQII+C Y ++++ L F +I++ Y QPQ V+
Sbjct: 608 TIF-ENSITNKIHLLQDRHLDQIIMCAIYIYIRVTKMLEPKFSKIMHAYRNQPQAVNSVY 666
Query: 467 RSV---------FDHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNND--- 514
R V ++ DII FYN + P + T TNR +N N D
Sbjct: 667 REVLISVKENGELEYRDIIHFYNYTYVPEM-----------TKFCTNR---LNANTDNVN 712
Query: 515 --ASVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKD 572
S P PKK+ HS+YV+ + +E I S E + SP K
Sbjct: 713 LLLSPHPIERTTVPKKLIPNHSLYVTKMSKNE----IQQSPDQL-----EYIISCSPAKK 763
Query: 573 LTDINHRLNSNRRVRGALNFDD 594
L D+N ++ N + L+F D
Sbjct: 764 LEDMNKKVLGNG--KRMLSFGD 783
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 7/126 (5%)
Query: 84 AEQRRLEALKLNYKVLETMCTAEA----QVLHAKNLTSLFHRCMLACSAELVLATHKTVT 139
AE R A L + +++ + AE Q++ +L +F+ ++ C ELVL + T
Sbjct: 432 AENRFRLAKSLYFYLMDHILRAEIKNKPQIMRRISL-DIFNVTLMTCCTELVLYAYNT-E 489
Query: 140 MLFLAVLERIGITAFNLSKVIQSFIRH-EESLPRELRRHLNSLEERLLESMVWEKGSSMY 198
+ F +LE I AF K+I+ +R+ ++ L R L +HLNS+EE LE +VW++ S +
Sbjct: 490 LNFPWILECFSINAFEFFKIIEIVVRNGKDCLTRSLVKHLNSIEETCLERLVWQRISPAW 549
Query: 199 NSLTVA 204
+ + A
Sbjct: 550 DIIGSA 555
>gi|301615832|ref|XP_002937369.1| PREDICTED: retinoblastoma-like protein 2-like [Xenopus (Silurana)
tropicalis]
Length = 1089
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 66/113 (58%), Gaps = 6/113 (5%)
Query: 94 LNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLER 148
L YKVLE++ E + L +++S+ FHR +++C E+ + ++K F +++
Sbjct: 469 LYYKVLESVIDQEKKRLGDIDMSSILEQDVFHRSLMSCCLEITVFSYKPPGN-FPSIIVM 527
Query: 149 IGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
+ + KVI+ I+ EE L RE+ +HLN++EE++LE M W S +++ +
Sbjct: 528 FELAPYQFYKVIEVVIKAEEGLCREVVKHLNNIEEQILECMAWTHDSPLWDKI 580
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 378 FCK-INKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFY 436
FC+ + LA++R+ + +L +S ++R ++ C + +L L + H+DQ+++C Y
Sbjct: 788 FCRRVYCLASIRLKDLCLKLDISDELRRKIW-TCFEFSLVHCPELIKDRHLDQLLMCAVY 846
Query: 437 GVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
+ K+++ + +F I+ Y QP V+RSV
Sbjct: 847 VITKVTKEDTSFHNIMKCYRVQPHASSHVYRSVL 880
>gi|443718002|gb|ELU08799.1| hypothetical protein CAPTEDRAFT_192080 [Capitella teleta]
Length = 1021
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 84/167 (50%), Gaps = 16/167 (9%)
Query: 47 PVSTAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAE 106
P M K + C ++PS D G+++ +A++R L +K LE + E
Sbjct: 356 PHEDIMARVKEMGETFCERYAQPSDDHPGSHV---DFAKKRLQLGESLYFKALENVMKNE 412
Query: 107 ---AQVLHAKNLTS---------LFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAF 154
QV A T+ +FHR + A E+V+ ++ + F +++ + +
Sbjct: 413 MKRKQVKEAAGKTTDFSNLLEQDIFHRSLFASCLEIVIFSYNS-QRAFPWIIDVFNLDPY 471
Query: 155 NLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
+ KVI+ +R EE L R++ +H+N +EE +L+S+ W+ GS +++++
Sbjct: 472 HFYKVIEVLVRAEEGLSRDVVKHMNHIEELILDSLAWKDGSMLWDAI 518
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P + + F K+ LA+VR+ + ERL + ++R ++ C + L + L + H
Sbjct: 700 KPKKSGSLPLFFRKVYHLASVRLRDLCERLDVDCELRAKIWT-CFEHVLMEHIELMRDRH 758
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
+DQ+I+ Y ++K+++ + +F+EI+ Y QPQ + V+RSV
Sbjct: 759 LDQMIMSSVYVMSKVTEKDTSFQEIMRCYRLQPQAQSHVYRSVL 802
>gi|241174272|ref|XP_002410999.1| cell cycle regulator p107, putative [Ixodes scapularis]
gi|215495086|gb|EEC04727.1| cell cycle regulator p107, putative [Ixodes scapularis]
Length = 1064
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 7/128 (5%)
Query: 80 DNIWAEQRRLEALKLNYKVLETMCTAEAQV------LHAKNLTSLFHRCMLACSAELVLA 133
D +A +R L L YKVLE + E + L A +F + + AC E+V+
Sbjct: 446 DTEFAHKRLLLGETLFYKVLENIIGIEKKQQRPNAELSAHLCHGIFQQSLFACCLEIVMF 505
Query: 134 THKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEK 193
+ + F +LE + +N K+I+ IR EE L RE+ +HLN EE++LE + W++
Sbjct: 506 CYNS-QREFPWILEIFDLVPYNFYKIIEPLIRAEEGLWREVVKHLNRTEEQILECLAWKE 564
Query: 194 GSSMYNSL 201
S ++ ++
Sbjct: 565 ESPLWEAI 572
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
Query: 366 GEPCAETGINICFCKINKLAAVRINAMVERLQ-LSQQIRESVYCLCPKRTLNQRTSLFFN 424
G P + + F K+ L+AVR+ + +RL L + ++ C + ++ T L +
Sbjct: 754 GRPVRSGSLALFFRKVYHLSAVRLQDLCDRLNILDVDVCRKIW-TCFEHSIVNHTDLMKD 812
Query: 425 CHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
H+DQ+ILC Y V K++++N F+EI+ Y +QPQ K V+RS+
Sbjct: 813 RHLDQLILCAVYVVTKVTKVNKCFQEILQCYRQQPQTKSHVYRSIL 858
>gi|195432212|ref|XP_002064120.1| GK19998 [Drosophila willistoni]
gi|194160205|gb|EDW75106.1| GK19998 [Drosophila willistoni]
Length = 833
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 110/249 (44%), Gaps = 42/249 (16%)
Query: 349 KPLPPPLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYC 408
KPLP L R G + I K+ L +RI + L LS E V+
Sbjct: 590 KPLPTSLDVNRDQTAGA--------LQIFLRKVYLLGWLRIQKLCSELNLSNPTPEKVWH 641
Query: 409 LCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQL-NLTFKEIIYNYGKQPQCKPQVFR 467
+ + ++ Q T L + H+DQII+C Y +++++ F +I+ Y QPQ V+R
Sbjct: 642 IF-EHSIAQETGLMQDRHLDQIIMCAIYIYIRVTKMAEPKFIDIMRAYRNQPQAVNNVYR 700
Query: 468 SVF-------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPA 520
V + DII FYNK + +K + +T +++ + + PA
Sbjct: 701 EVLILEGGETKYKDIIYFYNKHYVDRMKQF-----SISYLDRTVDPADLLLSPHPTERPA 755
Query: 521 LPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRL 580
L PKK++ H VY++ ++ +E L+S ++ Y SP KDL +N
Sbjct: 756 L----PKKLTQNH-VYITQMQKNE--TLVSDNNMIY-------EFYRSPGKDLERMNE-- 799
Query: 581 NSNRRVRGA 589
+VRGA
Sbjct: 800 ----KVRGA 804
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 117 SLFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEES---LPRE 173
S+F+ ++AC ELVLA ++T F + + I+AF+ K+I+ +RH L R
Sbjct: 499 SIFNVTLMACCVELVLAAYET-EWKFPWINDCFSISAFDFQKIIEIVVRHGSRVGFLNRS 557
Query: 174 LRRHLNSLEERLLESMVWEKGSSMYNSLTVARPALSAEINLG 215
+HLNS+EE LE + W + S ++ + A L +++
Sbjct: 558 QIKHLNSIEETCLERLAWSRTSPVWEMIASAVKPLPTSLDVN 599
>gi|345490211|ref|XP_001604637.2| PREDICTED: retinoblastoma-like protein 1-like isoform 1 [Nasonia
vitripennis]
Length = 1002
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 6/125 (4%)
Query: 83 WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKT 137
+ ++R A L YKVLE + E ++T L F +C+ AC E+VL ++
Sbjct: 453 YGKKRLQSAQTLFYKVLELVLNDEMSKKPNFDVTILLKNHDFLQCLFACCCEIVLYSYHY 512
Query: 138 VTMLFLAVLERIGITAFNLSKVIQSFIRHE-ESLPRELRRHLNSLEERLLESMVWEKGSS 196
F +L+ + I A+ KVI+ ++ + L R++ +HLN +EE +LES+ W+ GS
Sbjct: 513 KERTFPWILKALNIEAYLFYKVIEVIVKVAVDQLTRDMVKHLNRIEEMILESLAWKSGSP 572
Query: 197 MYNSL 201
++ +L
Sbjct: 573 LWRAL 577
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 67/164 (40%), Gaps = 47/164 (28%)
Query: 378 FCKINKLAAVRINAMVERLQLSQ-QIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFY 436
F K L R+ + + L+++ ++ ++ + + ++ +RT L + H+DQI++ Y
Sbjct: 711 FRKFYNLTITRMQNLCQSLEITDIDLKRKIWTIF-EYSVKERTHLMKDRHLDQILMSAVY 769
Query: 437 GVAKISQLNL-TFKEIIYNYGKQPQCKPQVFRSVF------------------------- 470
+ K+ ++ TF EI+ Y QPQ + ++RSV
Sbjct: 770 VICKVGKIGKNTFTEIMRCYRFQPQAESHIYRSVLISTNIDDNSEAALENGSNRNSQTNN 829
Query: 471 -------------------DHVDIITFYNKIFAPTVKPLLVELG 495
+ D+I FYN ++ P VK +LG
Sbjct: 830 TCPPTPSDMASTSRIYGSEERGDLIKFYNTVYVPEVKDFAKKLG 873
>gi|226374703|gb|ACO52486.1| retinoblastoma, partial [Dicentrarchus labrax]
Length = 207
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 26/182 (14%)
Query: 414 TLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--- 470
TL L H+DQ+++ Y + K+ ++L FK I+ Y P + F+ V
Sbjct: 1 TLQHEHELMRGRHLDQLMMSAMYAICKVKSVDLRFKTIVTAYKNMPNTNQETFKHVLITE 60
Query: 471 DHVD-IITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDM----- 524
H D II FYN++F +K +++ + R + S P +P
Sbjct: 61 GHYDSIIVFYNQVFMQKLKTNILQYA-------STRPPTL------SPIPQIPRSPYKFP 107
Query: 525 -SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSN 583
SP +V +++VY+SPL++ M I +GES + P IN +NS+
Sbjct: 108 NSPLRVPGSNNVYISPLKSPRMSPGIMTPRSRMLVSIGES---FGPSNRFQKINQMVNSS 164
Query: 584 RR 585
R
Sbjct: 165 DR 166
>gi|125776429|ref|XP_001359274.1| GA18648 [Drosophila pseudoobscura pseudoobscura]
gi|54639017|gb|EAL28419.1| GA18648 [Drosophila pseudoobscura pseudoobscura]
Length = 781
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 363 GGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLF 422
G G E A TG IC CK LA R+ + + L L + ++ + + Q L
Sbjct: 552 GSGPEEKARTGFVICLCKFYCLANQRLVNLCQSLVLMEHF-PKIWLIAEHSFIQQGGDLL 610
Query: 423 FNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV----FDHVDIITF 478
++D +++C + A++ +L L F +I+ +Y QP + +V+R+V DII F
Sbjct: 611 KQRNLDHLLICAIHLHARLKRLRLNFSQILQHYRWQPHARREVYRAVPLGDGQSGDIIDF 670
Query: 479 YNKIFAPTVK 488
YNK++ +++
Sbjct: 671 YNKVYVKSME 680
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query: 91 ALKLNYKVLETMCTAEAQVL-HAKNLTSLFHRCM----LACSAELVLATH--KTVTMLFL 143
A +L Y++L+ + ++E + H K + L R + +AC EL L + + F
Sbjct: 412 ACRLYYQLLQRIISSELLLKPHLKMVQLLKQRTLSFTLVACCLELALRIREDRVEELKFP 471
Query: 144 AVLERIGITAFNLSKVIQSFIRHEESL-PRELRRHLNSLEERLLESMVWEKGSSMYNSLT 202
+L+ + A+ K+++ +RH L R+L +HL ++E+ L S+++ SS + L
Sbjct: 472 FILKCYSLDAYEFQKILELVVRHRTGLMGRDLIKHLQAVEDECLGSLMFRGDSSFWKILG 531
Query: 203 VAR 205
A+
Sbjct: 532 KAQ 534
>gi|345490209|ref|XP_003426328.1| PREDICTED: retinoblastoma-like protein 1-like isoform 2 [Nasonia
vitripennis]
Length = 1030
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 6/125 (4%)
Query: 83 WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKT 137
+ ++R A L YKVLE + E ++T L F +C+ AC E+VL ++
Sbjct: 481 YGKKRLQSAQTLFYKVLELVLNDEMSKKPNFDVTILLKNHDFLQCLFACCCEIVLYSYHY 540
Query: 138 VTMLFLAVLERIGITAFNLSKVIQSFIRHE-ESLPRELRRHLNSLEERLLESMVWEKGSS 196
F +L+ + I A+ KVI+ ++ + L R++ +HLN +EE +LES+ W+ GS
Sbjct: 541 KERTFPWILKALNIEAYLFYKVIEVIVKVAVDQLTRDMVKHLNRIEEMILESLAWKSGSP 600
Query: 197 MYNSL 201
++ +L
Sbjct: 601 LWRAL 605
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 67/164 (40%), Gaps = 47/164 (28%)
Query: 378 FCKINKLAAVRINAMVERLQLSQ-QIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFY 436
F K L R+ + + L+++ ++ ++ + + ++ +RT L + H+DQI++ Y
Sbjct: 739 FRKFYNLTITRMQNLCQSLEITDIDLKRKIWTIF-EYSVKERTHLMKDRHLDQILMSAVY 797
Query: 437 GVAKISQLNL-TFKEIIYNYGKQPQCKPQVFRSVF------------------------- 470
+ K+ ++ TF EI+ Y QPQ + ++RSV
Sbjct: 798 VICKVGKIGKNTFTEIMRCYRFQPQAESHIYRSVLISTNIDDNSEAALENGSNRNSQTNN 857
Query: 471 -------------------DHVDIITFYNKIFAPTVKPLLVELG 495
+ D+I FYN ++ P VK +LG
Sbjct: 858 TCPPTPSDMASTSRIYGSEERGDLIKFYNTVYVPEVKDFAKKLG 901
>gi|330800507|ref|XP_003288277.1| hypothetical protein DICPUDRAFT_97976 [Dictyostelium purpureum]
gi|325081682|gb|EGC35189.1| hypothetical protein DICPUDRAFT_97976 [Dictyostelium purpureum]
Length = 1110
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Query: 85 EQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL--FHRCMLACSAELVLATHKTVTMLF 142
E+R+ A KL Y +LE E + + L + F++ +L+ E++ +K + F
Sbjct: 552 EKRKNIATKLYYSLLEKTIKKEQNISQIRILLNHEDFNKSLLSSCFEIIAYAYKLEPLYF 611
Query: 143 LAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
+ I AF+ +VI+S R + +LP+ L H S+EE++LE VW+K S +++ L
Sbjct: 612 PYFINYFNIQAFSYCRVIESIFRADWNLPKLLANHFYSIEEKILEKYVWKKNSPVFSML 670
>gi|348583|pir||A44879 retinoblastoma protein - clawed frog
gi|255082|gb|AAB23173.1| retinoblastoma protein, pXRb1 [Xenopus, Peptide, 899 aa]
Length = 899
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKT--- 137
QR + L Y+V+E + E + L N + L FH C+LAC+ E+V+A++
Sbjct: 419 QRYKLGVCLYYRVMEAILKTEEERLSVHNFSKLLNNDIFHICLLACAVEVVVASYARNAS 478
Query: 138 -------VTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMV 190
+ F +L I AF+ KVI+ FI+ E SL + ++L E +++E +
Sbjct: 479 QAYCSSGTNLSFPWILRAFEIKAFDFYKVIECFIKAEPSLTSNMIKYLERCEHQIMECLA 538
Query: 191 WEKGSSMYNSLTVAR 205
W+ S +++ + R
Sbjct: 539 WQSDSPLFDLIKQTR 553
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 119/288 (41%), Gaps = 44/288 (15%)
Query: 372 TGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQII 431
T +++ + K+ LA R++++ L E V + TL Q L + H+DQI+
Sbjct: 618 TSLSLFYKKVYLLAYKRLSSLCSSLLSDHPELEQVIWTLLQHTLQQEYELMRDRHLDQIM 677
Query: 432 LCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKIFAPTV 487
+C YG+ K ++L FK I+ Y + F+ V H II FYN +F +
Sbjct: 678 MCSMYGICKAKNIDLRFKTIVTAYKGLTNTNQETFKHVLIRDGQHDSIIVFYNLVFMQKL 737
Query: 488 KPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSAT----HSVYVSPLRT- 542
K +++ G + S P +P SP + + ++YVSPL+T
Sbjct: 738 KSHILQYGSA-------------RHPTLSPIPHIP-RSPYRFGNSPKVPGNIYVSPLKTP 783
Query: 543 -SEMDALISHS----SKSYYACVGESTHAYSPFKDLTDINHRLNSNRR--VRGA------ 589
D L+S S S+ +GE+ + F+ IN LNS R R A
Sbjct: 784 YKTADGLLSPSKMTPKTSFLISLGETFRSPDRFQ---KINQMLNSCERPIKRSADTGTTP 840
Query: 590 -----LNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPEQLD 632
L FD D S + S + Q + ST ++ ++L+
Sbjct: 841 KPLKKLRFDSDGQDEADGSKHIQGESKFQQKLAEMTSTRTRMQKQKLE 888
>gi|170065187|ref|XP_001867835.1| retinoblastoma-family protein [Culex quinquefasciatus]
gi|167882287|gb|EDS45670.1| retinoblastoma-family protein [Culex quinquefasciatus]
Length = 933
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 118/293 (40%), Gaps = 69/293 (23%)
Query: 341 LGLNNLKSKPLPPPLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQL-S 399
LG N+ P+P ++ PG + +N+ F K +AAVR+ + L L S
Sbjct: 629 LGFNSPLKLPVPNGSL-SKQRPGA-------SSLNLFFRKFYGVAAVRMKDLCNNLGLTS 680
Query: 400 QQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQP 459
++ ++ + ++ L + H+DQ+++C Y K+++L TF +I+ Y QP
Sbjct: 681 DDKQKQIWTIFEHSIVHCTRELMRDRHLDQMLMCAIYVFVKVTKLPNTFTDIMKFYRIQP 740
Query: 460 QCKPQVFRSVF-------------------DHV------------------------DII 476
Q V+RSVF D V DII
Sbjct: 741 QSNSHVYRSVFIARTTPADQQQQQNGETQRDEVTVTRGIAPIDLAGVSMQHGSEERGDII 800
Query: 477 TFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDM-SPKKVSATHSV 535
FYNK++ P ++ + G N D + P+ M SPK++ S+
Sbjct: 801 MFYNKVYVPLMQEFAIPFG--------NGDKRSLMLSPPPKTPSRSVMQSPKQIDGRISL 852
Query: 536 YVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNRRVRG 588
Y++P+ D S +S +Y SP KDL D+ +R+ N + G
Sbjct: 853 YITPMDRKCADLKESPNSVTYLI-------DRSPAKDL-DVINRIVKNASITG 897
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 94 LNYKVLETMCTAE-----AQVLHAKNLTSLFHRCMLACSAELVLATHKTVTMLFLAVLER 148
L Y++LE + AE V+ +F++ +L C AE+V+ H + F +L+
Sbjct: 394 LYYRLLENIIRAEIRRRGGNVIRQVCCEEMFNKTLLVCCAEIVIYAH-NLQQNFPWILKM 452
Query: 149 IGITAFNLSKVIQSFI-RHEESLPRELRRHLNSLEERLLESMVWEKGSSMY 198
+ F ++I+ I H + L R+L +HL +EE+ LES+ W+ S ++
Sbjct: 453 FDMQPFIFYRIIEMVILYHNDLLSRDLIKHLTIIEEQCLESLSWQSSSPLW 503
>gi|340500363|gb|EGR27249.1| hypothetical protein IMG5_199290 [Ichthyophthirius multifiliis]
Length = 143
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 24/140 (17%)
Query: 412 KRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVFD 471
K L ++ L N HIDQ+ILCC Y KI ++N+ FK II Y Q + R +
Sbjct: 2 KHILGNQSELLINRHIDQLILCCIYSYCKICKINILFKSIIQVYENLNQHNSNMIRELIY 61
Query: 472 HV---------DIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALP 522
+ DI+T YN IF +VK + + TA N +E+ +N + PA+
Sbjct: 62 DMPLGENNKTGDIVTLYNNIFIQSVKNYI-----LNTAKNINSTNEIINNTNQIKNPAI- 115
Query: 523 DMSPKKVSATHSVYVSPLRT 542
T ++ SPL++
Sbjct: 116 ---------TTPIFTSPLKS 126
>gi|47196291|emb|CAG13684.1| unnamed protein product [Tetraodon nigroviridis]
Length = 318
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LA+VR+ + +L +S ++R ++ C + +L T L + H+
Sbjct: 54 PLRKGSLSLFFRKVYHLASVRLRDLCAKLDISAELRRKIWT-CFEYSLVHCTDLMMDRHL 112
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y ++K+++ + +F+ I+ Y QPQ V+R V
Sbjct: 113 DQLLMCAVYIMSKVTKEDRSFQNIMKCYRTQPQAGSSVYRCVL 155
>gi|195131539|ref|XP_002010208.1| GI14825 [Drosophila mojavensis]
gi|193908658|gb|EDW07525.1| GI14825 [Drosophila mojavensis]
Length = 802
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 99/236 (41%), Gaps = 33/236 (13%)
Query: 370 AETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQ 429
A + I KI L +RI + L L + ++S ++ +T L + H+DQ
Sbjct: 554 AADQLQIFLRKILLLGWLRIGKLCSELSLGE--KQSEIWTIFDHSITHKTDLMKDRHLDQ 611
Query: 430 IILCCFYGVAKISQLNL-TFKEIIYNYGKQPQCKPQVFRSV---------FDHVDIITFY 479
II+C Y +++ + F +I+ Y QPQ V+R V ++H DII FY
Sbjct: 612 IIMCAIYIYIRVTNMEGPKFSDIMKAYRNQPQAVNSVYREVLIKVNENGEYEHKDIIHFY 671
Query: 480 NKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSP 539
N + P +K + N D VN S P M P+K+ S+YV
Sbjct: 672 NFTYVPEMKNFCT------NYLAKNGDKNVNLL--MSPHPTERPMVPRKLIHNQSLYVKQ 723
Query: 540 LRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINH-RLNSNRRVRGALNFDD 594
+ +EM S V S SP K L +N L S +RV L+FDD
Sbjct: 724 MSKNEM-----QQSPDQLVYVISS----SPSKKLDYMNKIVLGSGKRV---LDFDD 767
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 8/113 (7%)
Query: 98 VLETMCTAEAQVLHAKNLTSLFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLS 157
+L T + Q++H +L + R ++AC ELVL + T + F +L+ I AF S
Sbjct: 429 ILRDEITTKPQIVHKISL-DICIRTLMACCTELVLEAY-TTELKFPWILDCFSINAFQFS 486
Query: 158 KVIQSFIRH------EESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
K+I+ +R+ E L R L +HLNS+EE LE +VW++ S + + A
Sbjct: 487 KIIEIVVRNGIHGTPEGCLTRSLVKHLNSIEETCLERLVWKRNSPFWEMIDHA 539
>gi|195347468|ref|XP_002040274.1| GM19021 [Drosophila sechellia]
gi|194121702|gb|EDW43745.1| GM19021 [Drosophila sechellia]
Length = 799
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 118 LFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRH---EESLPREL 174
+F+ ++AC ELVL +KT + F VL+ I+AF K+I+ +RH E L R L
Sbjct: 475 IFNITLMACCVELVLEAYKT-ELKFPWVLDCFSISAFEFQKIIEIVVRHGSHEGCLNRSL 533
Query: 175 RRHLNSLEERLLESMVWEKGSSMYNSLTVAR 205
+HLNS+EE LE + W + S++++ + A+
Sbjct: 534 IKHLNSIEETCLERLAWARNSTVWDMIASAQ 564
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 72/177 (40%), Gaps = 41/177 (23%)
Query: 370 AETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQ 429
A + I K+ L +RI + L L ++ ES++ + + ++ T L + H+DQ
Sbjct: 578 AAGALQIFLRKVYLLGWLRIQKLCSELSLCEKTPESIWHIF-EHSITHETDLMKDRHLDQ 636
Query: 430 IILCCFYGVAKISQL-NLTFKEIIYNYGKQPQCKPQVFRSVFDHVDIITFYNKIFAPTVK 488
I+C Y ++ ++ + F +I+ Y QPQ V+R VF
Sbjct: 637 NIMCAIYIYIRVKRMEDPKFSDIMRAYRNQPQAVNSVYREVF------------------ 678
Query: 489 PLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRTSEM 545
M N D E A PKKV+ +HS++VS + +E+
Sbjct: 679 ------------MDINEDGEPKGKRAAQ---------PKKVTQSHSLFVSQMSKNEI 714
>gi|195152251|ref|XP_002017050.1| GL22085 [Drosophila persimilis]
gi|194112107|gb|EDW34150.1| GL22085 [Drosophila persimilis]
Length = 781
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 363 GGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLF 422
G G E TG IC CK LA R+ + + L L + ++ + + Q L
Sbjct: 552 GSGPEEKPRTGFVICLCKFYCLANQRLVNLCQSLVLMEHF-PKIWLIAEHSFIQQGGDLL 610
Query: 423 FNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV----FDHVDIITF 478
++D +++C + A++ +L L F +I+ +Y QP + +V+R+V DII F
Sbjct: 611 KQRNLDHLLICAIHLHARLKRLRLNFSQILQHYRWQPHARREVYRAVPLGDGQSGDIIDF 670
Query: 479 YNKIFAPTVK 488
YNK++ +++
Sbjct: 671 YNKVYVKSME 680
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 91 ALKLNYKVLETMCTAEAQVL-HAKNLTSLFHRCM----LACSAELVLATH--KTVTMLFL 143
A +L Y+ L+ + +E + H K + L R + +AC EL L + + F
Sbjct: 412 ACRLYYQFLQRIIGSELLLKPHLKMVQLLKQRTLSVTLVACCLELALRIREDRVEELKFP 471
Query: 144 AVLERIGITAFNLSKVIQSFIRHEESL-PRELRRHLNSLEERLLESMVWEKGSSMYNSLT 202
+L+ + A+ K+++ +RH L R+L +HL ++E+ L S+++ SS + L
Sbjct: 472 FILKCYSLDAYEFQKILELVVRHRTGLIGRDLIKHLQAVEDECLGSLMFRGDSSFWKILG 531
Query: 203 VAR 205
A+
Sbjct: 532 KAQ 534
>gi|6469620|gb|AAF13358.1|AF154334_1 unknown [Eufolliculina uhligi]
Length = 764
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
Query: 378 FCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYG 437
F ++ AA R++ + L LS ++E+ + + K L + L H+DQ+++C YG
Sbjct: 545 FKRVYSQAACRLSELATSLGLSDALKENSWVVV-KYLLTDKLELLVGRHLDQMVICSIYG 603
Query: 438 VAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF---DHVD-IITFYNKIFAPTVKPLLVE 493
K + ++F +I+ +Y K ++ V H D +I FYNK+F PT+K L++
Sbjct: 604 TCK-GRSEVSFTKIVESYKKLFNEDQSIYMQVLIEGSHFDTVIQFYNKVFMPTLKEFLID 662
Query: 494 L 494
+
Sbjct: 663 M 663
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 121 RCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNS 180
R + AC E L TH+ + +L+ I F+ K I+ F+ + +P L+ HL
Sbjct: 448 RSLYACCIETSLYTHEVTNISLGELLKACDIGMFDFWKTIRVFLTFDARIPMGLKWHLKE 507
Query: 181 LEERLLESMVW 191
+E +++ + W
Sbjct: 508 VELQIVSCLAW 518
>gi|195110157|ref|XP_001999648.1| GI22956 [Drosophila mojavensis]
gi|193916242|gb|EDW15109.1| GI22956 [Drosophila mojavensis]
Length = 792
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 12/185 (6%)
Query: 353 PPLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPK 412
P +S+ G A + IC K +A R+ + + L L + ++ +
Sbjct: 554 PRFQDVQSSLGQENVKFASGSVTICLRKFYHVANQRLTYLCKCLSLVTSYTQ-IWHILEH 612
Query: 413 RTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-- 470
+ L H+DQ+++C Y + S L +TF +II Y +QP ++R+V+
Sbjct: 613 SIIVHGEELLQQRHLDQLLICAIYLWGRKSHLRITFSDIIQQYRRQPHADSAIYRAVYCA 672
Query: 471 ---DHVDIITFYNKIFAPTVKPLLVEL--GPVGTAMKTNRDS----EVNHNNDASVFPAL 521
DII+FYN+++ P + V L G A +T S E++ NN+ +
Sbjct: 673 DGQPTTDIISFYNRVYIPLMADYAVALQCGQSDAARETVATSRPLQELSGNNNKRRLKSN 732
Query: 522 PDMSP 526
+SP
Sbjct: 733 VTVSP 737
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 16/124 (12%)
Query: 94 LNYKVLETMCTAE---------AQVLHAKNLTSLFHRCMLACSAELVL---ATHKTVTML 141
L Y +L+ + AE AQ+L K L F+ ++AC ELVL T +T T
Sbjct: 431 LYYVLLDKIVGAELRRRPSIKIAQML--KQLQRTFNATLIACCLELVLHIFGTDETQTK- 487
Query: 142 FLAVLERIGITAFNLSKVIQSFIRHEESL-PRELRRHLNSLEERLLESMVWEKGSSMYNS 200
F VL GI A+ K+I+ +RHE L R+L +HL +E + L ++W+K S ++
Sbjct: 488 FPWVLNCFGIDAYEFQKIIELVVRHESGLLTRDLIKHLQEIETQCLTKLIWQKSSQLWRY 547
Query: 201 LTVA 204
+ A
Sbjct: 548 VDSA 551
>gi|321465662|gb|EFX76662.1| hypothetical protein DAPPUDRAFT_322171 [Daphnia pulex]
Length = 1052
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 71 ADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTS------LFHRCML 124
AD N A +R L YKVLE + E + L A S + H+ ++
Sbjct: 454 ADEGRTNGFSMDMARKRLQLGESLYYKVLEKIIIDERRRLKAGTDLSGILQQDMLHQLLI 513
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
C E+VL ++ + F +LE I F KVI+ IR E+ L R++ +HLN +EE+
Sbjct: 514 TCCLEIVLFSYNS-QRTFPWILEVFPIQPFYFYKVIEVLIRAED-LSRDVVKHLNHMEEQ 571
Query: 185 LLESMVWEKGSSMYNSL 201
+LESM W S ++ L
Sbjct: 572 ILESMAWRYQSPLWEYL 588
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 341 LGLNNLKSKPLPPPLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQ 400
L LN+ K + LP P T ++ +P +++ F K LA+VR+ + RL+L +
Sbjct: 711 LELNDQKMELLPSPSVVTTAD----NKPKRTGSLSLFFRKFYHLASVRLQDLCNRLELYE 766
Query: 401 Q-IRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQP 459
+ +R+ ++ C + ++ + + L + H+DQI++C Y + K++ + F +I+ Y QP
Sbjct: 767 EDLRKKIWT-CFEFSVMKHSDLMQDRHLDQILMCAVYVICKVTGRDKNFTDIMRCYRTQP 825
Query: 460 QCKPQVFRSVF 470
V+RSV
Sbjct: 826 HASSHVYRSVL 836
>gi|226374705|gb|ACO52487.1| retinoblastoma, partial [Liza aurata]
Length = 223
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 26/185 (14%)
Query: 412 KRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF- 470
+ TL L + H+DQ+++ Y + K+ ++L FK I+ +Y P + F+ V
Sbjct: 18 QHTLQHEYELMRDRHLDQLMMSAMYAICKVKSVDLRFKTIVTSYKNMPNTSQETFKHVLI 77
Query: 471 --DHVD-IITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDM--- 524
H D II FYN++F +K +++ + R + S P +P
Sbjct: 78 TEGHYDSIIIFYNQVFMQRLKTNILQYA-------STRPPTL------SPIPQIPRSPYK 124
Query: 525 ---SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLN 581
SP +V +++VY+SP+++ M + +GES + F+ IN +N
Sbjct: 125 FPNSPLRVPGSNNVYISPMKSPRMSPSLMTPRTRMLVSIGESFGQSNRFQ---KINQMVN 181
Query: 582 SNRRV 586
S+ R
Sbjct: 182 SSDRT 186
>gi|344253823|gb|EGW09927.1| Retinoblastoma-associated protein [Cricetulus griseus]
Length = 302
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 383 KLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKIS 442
+LA +R+N + RL E + + TL L + H+DQI++C YG+ K+
Sbjct: 29 RLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMKDRHLDQIMMCSMYGICKVK 88
Query: 443 QLNLTFKEIIYNYGKQPQCKPQVFRSV------FDHVDIITFYNKIFAPTVK 488
++L FK I+ Y P + F+ V FD II FYN +F +K
Sbjct: 89 NIDLKFKIIVTAYKDLPHAAQETFKRVLIREEEFD--SIIVFYNSVFMQRLK 138
>gi|260800656|ref|XP_002595214.1| hypothetical protein BRAFLDRAFT_135823 [Branchiostoma floridae]
gi|229280458|gb|EEN51226.1| hypothetical protein BRAFLDRAFT_135823 [Branchiostoma floridae]
Length = 305
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 65/127 (51%), Gaps = 5/127 (3%)
Query: 373 GINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIIL 432
+ + + K+ KLA +R+ ++ + L +S ++ ++ + L R L N H+DQ+I+
Sbjct: 179 SLQLFYNKVCKLAYMRLQSLCKLLCVSAEMEHRIWTAL-EFCLLHRPELLKNRHLDQVIM 237
Query: 433 CCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKIFAPTVK 488
C Y + K+S + FK I+ Y P V++ + ++ II FYN+++ T+K
Sbjct: 238 CSVYAICKVSGCDTKFKSIVAAYKNLPTASQTVYKEAWISGEEYDSIIGFYNRVYMQTLK 297
Query: 489 PLLVELG 495
++
Sbjct: 298 NYILRFA 304
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 56/104 (53%), Gaps = 21/104 (20%)
Query: 119 FHRCMLACSAELVLATHKTVT----------MLFLA-----------VLERIGITAFNLS 157
FHR +LACS E+++ T+ + + ML+ +L+ + A++
Sbjct: 9 FHRSLLACSVEVIMTTYGSASINTYFISGTPMLYTMATTDTNTSFPWILDVFELKAYDFF 68
Query: 158 KVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
KV+++FI E L +E+ +HL +E ++LE + W +GS +Y ++
Sbjct: 69 KVLETFILAEPKLTKEVIKHLQHIENKILERVAWREGSPLYEAI 112
>gi|195389132|ref|XP_002053231.1| GJ23772 [Drosophila virilis]
gi|194151317|gb|EDW66751.1| GJ23772 [Drosophila virilis]
Length = 792
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 353 PPLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPK 412
P +S+ G A INIC K LA R+ + + L L + ++ +
Sbjct: 552 PRCQDVQSSSGQENVRAAPGAINICLRKFYHLANQRLAYLCKCLSLLASYTK-IWHILEH 610
Query: 413 RTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-- 470
+ L H+DQ+++C Y + QL ++F +II Y +QP + ++R+V
Sbjct: 611 SIIVHGYELLRERHLDQLLMCAIYLCVRKGQLRISFSDIIQQYRRQPHAQSAIYRAVHLA 670
Query: 471 ---DHVDIITFYNKIF 483
+ DIITFYN+++
Sbjct: 671 DGQPNTDIITFYNRVY 686
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 14/117 (11%)
Query: 94 LNYKVLETMCTAE---------AQVLHAKNLTSLFHRCMLACSAELVLATHKT--VTMLF 142
L Y++L+ + AE AQ+L L F+ ++AC +LVL + + F
Sbjct: 429 LYYQLLDKIIAAELRRRPTIKLAQLL--IQLQRTFNVALIACCLQLVLHIFEAQDTQLKF 486
Query: 143 LAVLERIGITAFNLSKVIQSFIRHEESL-PRELRRHLNSLEERLLESMVWEKGSSMY 198
+L+ I + K+I+ +RHE L R+L +HL+ +E + L S++W+ S ++
Sbjct: 487 PWLLKCFNIDPYEFQKIIELVVRHECGLLTRDLIKHLHDIEAQCLTSLIWQNNSQLW 543
>gi|346464585|gb|AEO32137.1| hypothetical protein [Amblyomma maculatum]
Length = 314
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 117 SLFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRR 176
SLF + + AC E+V+ + + F +LE + +N K+I+ IR EE L RE+ +
Sbjct: 19 SLFLQSLFACCLEIVMFCYNS-QREFPWILEVFTLMPYNFYKIIEPLIRAEEGLWREVVK 77
Query: 177 HLNSLEERLLESMVWEKGSSMYNSL 201
HLN +EE++LE + W+ S ++ ++
Sbjct: 78 HLNHIEEQILECLAWKDDSPLWEAI 102
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 366 GEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNC 425
G P + + F K+ LA VR + RL + Q + C + ++ +T L +
Sbjct: 214 GRPLRSGSLALFFRKVYHLAGVRFQDICARLGIMQMDIQLKIWTCFEHSIVCQTDLMRDR 273
Query: 426 HIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFR 467
H+DQ+ILC Y + K+++++ + + +QPQ K V+R
Sbjct: 274 HLDQLILCAVYVITKVTRVDKSSGDPSL-LRQQPQNKSHVYR 314
>gi|387204880|gb|AFJ69035.1| retinoblastoma-like protein, partial [Nannochloropsis gaditana
CCMP526]
Length = 96
Score = 59.7 bits (143), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 45/74 (60%)
Query: 119 FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHL 178
FHR +LAC +++ VT+ VL+ + A++L K ++SF++ LP LR HL
Sbjct: 23 FHRALLACCLQVLAKALSLVTLSLGRVLQICELQAYDLFKALESFVKASPGLPSLLRLHL 82
Query: 179 NSLEERLLESMVWE 192
+EE++LESM W+
Sbjct: 83 IEVEEQILESMAWQ 96
>gi|449019664|dbj|BAM83066.1| similar to retinoblastoma-family protein [Cyanidioschyzon merolae
strain 10D]
Length = 916
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 86/198 (43%), Gaps = 31/198 (15%)
Query: 372 TGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQII 431
+++ F K+ A RI + RL + ++ E+ K L ++ LF H+D ++
Sbjct: 607 AALDLFFDKLLMQADYRILNVCARLGICEEAFENRVWSIFKLALTEQWELFIGRHLDTVL 666
Query: 432 LCCFYGVAKISQ-LNLTFKEIIYNYG---KQPQC------KPQVFRSVF----DHVDIIT 477
LCCFYG AK + L F +II Y +C V+R + DII
Sbjct: 667 LCCFYGAAKTQRSLQFKFVDIIRAYRAVVADSECIRLSDSLQTVYRDLALDDGGRGDIIA 726
Query: 478 FYNKIFAPTVKP-LLVELGPVGTAM--------KTNRDSE----VNHNNDASVFP-ALPD 523
FYN IF P +K LL + P G A + R+SE +H N P + P
Sbjct: 727 FYNLIFVPHMKRYLLGQTTPEGPAAALSMSSTPERRRESESELDAHHVNAPHASPVSSPG 786
Query: 524 MSPKKVSATHSVYVSPLR 541
+ P+ V + SPLR
Sbjct: 787 LGPRIVD---KIISSPLR 801
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 79/149 (53%), Gaps = 10/149 (6%)
Query: 84 AEQRRLEALKLNYKVLETMCTAEAQVLHAK-----NLTSL--FHRCMLACSAELVLATHK 136
AEQR E + + + LE++ AE Q ++ L +L FH+ +L C+ E V A++
Sbjct: 471 AEQRIGEVMAVYWYALESILNAETQRMNGSTDFVPKLLALQPFHKALLLCAVETVCASYG 530
Query: 137 TVTML-FLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGS 195
+ F +LE + ++ F+ K+I +++ + E+LP + +R L + +E +L + W+ S
Sbjct: 531 IRDEIHFEHLLESLKLSPFDFIKIIGAYVLNVENLPPQAKRRLAACQECVLCVLAWQSDS 590
Query: 196 SMYNSLTVARPAL--SAEINLGFTDILFQ 222
+ +L + +A ++L F +L Q
Sbjct: 591 LLVRALRTGDMSSIPTAALDLFFDKLLMQ 619
>gi|22135753|gb|AAM91029.1| retinoblastoma susceptibility protein [Danio rerio]
Length = 314
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 24/130 (18%)
Query: 100 ETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTM-------------- 140
E+M +E + L +N + L FH +LAC+ E+V+AT+ ++
Sbjct: 1 ESMLKSEEKRLSVQNFSKLLNNAAFHTSLLACALEVVIATYVGSSLKNGGFGRSSGASDS 60
Query: 141 -----LFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGS 195
F +L + AF+ KVI+SFI+ E +L ++ +HL E ++ES+ W S
Sbjct: 61 VESNLCFPWILSVFQLPAFDFYKVIESFIKAEPTLKHDMVKHLEQCEHVIMESLAWRADS 120
Query: 196 SMYNSLTVAR 205
+++ L +R
Sbjct: 121 PLFDLLKQSR 130
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 15/148 (10%)
Query: 354 PLYPTRSNPGGGGEPCA-------ETGINICFCKINKLAAVRINAMVERLQLSQQIRESV 406
P+ P R P EP +++ + K+ ++A +R+ + L S E +
Sbjct: 161 PVRPCRQPPVMEAEPPTPGTRAPRSNSLSLFYKKLYRMAYLRLKMLFSNLLTSHPEMEPI 220
Query: 407 YCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVF 466
+ TL L + H+DQ+I+ Y + K+ ++L FK I+ Y + P + F
Sbjct: 221 IWTLLQHTLQNEYELMRDRHLDQLIMSAMYAICKVKNVDLRFKTIVTAYKELPNTNQETF 280
Query: 467 RSV------FDHVDIITFYNKIFAPTVK 488
+ V +D +++ FYN +F +K
Sbjct: 281 KRVLIREGQYDSINV--FYNLVFMQKLK 306
>gi|194901176|ref|XP_001980128.1| GG16967 [Drosophila erecta]
gi|190651831|gb|EDV49086.1| GG16967 [Drosophila erecta]
Length = 780
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 17/132 (12%)
Query: 366 GEPCAETGINICFCKINKLAAVRINAM------VERLQLSQQIRESVYCLCPKRTLNQRT 419
G+ TG IC K LA R+ + V+ + E + L R L R
Sbjct: 553 GKENFSTGSGICLRKFYGLANRRLLLLCKSLCLVDSFPHIWHLAEHSFTLEGGRLLRNR- 611
Query: 420 SLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV----FDHVDI 475
H+DQ++LC Y ++ +L+LTF II +Y +QP + +V+R V DI
Sbjct: 612 ------HLDQLLLCAIYLHVRLEKLHLTFSIIIQHYRRQPHAQRRVYREVSLGNGQTADI 665
Query: 476 ITFYNKIFAPTV 487
I+FYN ++ ++
Sbjct: 666 ISFYNSVYVQSM 677
>gi|195328575|ref|XP_002030990.1| GM24273 [Drosophila sechellia]
gi|194119933|gb|EDW41976.1| GM24273 [Drosophila sechellia]
Length = 782
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 17/132 (12%)
Query: 366 GEPCAETGINICFCKINKLAAVRINAM------VERLQLSQQIRESVYCLCPKRTLNQRT 419
G+ TG++IC K LA R+ + V+ + E + L R L R
Sbjct: 555 GKENFSTGLSICLRKFYGLANRRLLLLCKSLCLVDSFPQIWHLAEHSFTLESGRLLRNR- 613
Query: 420 SLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDI 475
H+DQ++LC + ++ +L+LTF II +Y +QP + +R V DI
Sbjct: 614 ------HLDQLLLCAIHLHVRLEKLHLTFSMIIQHYRRQPHSRRSAYREVILGNGQTADI 667
Query: 476 ITFYNKIFAPTV 487
ITFYN ++ ++
Sbjct: 668 ITFYNSVYVQSM 679
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 41/228 (17%)
Query: 10 VNITGA-KRKFDSLASPVKTITSPLSPHHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSK 68
+++ GA + K DS SP + LSP H K+ + + +II P K
Sbjct: 329 LSVKGAIETKEDSPKSPQLAFQTSLSPSHR---KLFTHDLPKTLPL-----SIIKAFPKK 380
Query: 69 PSAD------------------LQGANLMDNIWAEQRRLEALKLNYKVLETMCTAE---- 106
AD + + +D+ + +R +A L YK L+ + E
Sbjct: 381 EDADKTVNYLDETLEEMNRTFTMAVKDFLDDELSRKRFRQARGLCYKYLQKILGPEMVQK 440
Query: 107 -----AQVLHAKNLTSLFHRCMLACSAELVLATHKTVTML-FLAVLERIGITAFNLSKVI 160
Q++ + LT C L + + HK V L F VL + A++ K++
Sbjct: 441 PQLKIGQLIKKRKLTDALLACCLELALHV---HHKLVEGLKFPFVLHCFSLDAYDFQKIL 497
Query: 161 QSFIRHEES-LPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPA 207
+ +R + L REL +HL+ +EE L+S+++ K S ++ L P+
Sbjct: 498 ELVVRCDHGFLGRELIKHLDVVEEMCLDSLIFRKSSQLWWELKQRIPS 545
>gi|402579712|gb|EJW73663.1| hypothetical protein WUBG_15426, partial [Wuchereria bancrofti]
Length = 209
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Query: 94 LNYKVLETMCTAEAQVLHAKNLTSL--------FHRCMLACSAELVLATHKTVTMLFLAV 145
L ++ L + +E L + ++ L F + + C+ +LVL T+++V F
Sbjct: 44 LFFRFLHKIALSEKDRLGSGSIVKLSAVLLREDFLKALYVCALQLVLFTYESVRE-FPWS 102
Query: 146 LERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
LE + + A + KVI+ IR + SL RE+ +HLN +EER+LE W S ++ SL
Sbjct: 103 LEIMRLPAIHFYKVIELIIRADSSLSREMVKHLNKVEERVLEEFAWSLDSPLWPSL 158
>gi|195501123|ref|XP_002097668.1| GE24354 [Drosophila yakuba]
gi|194183769|gb|EDW97380.1| GE24354 [Drosophila yakuba]
Length = 783
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 421 LFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV----FDHVDII 476
L N H+DQ++LC + ++ +L+LTF II +Y +QP + +V+R V DII
Sbjct: 610 LLRNRHLDQLLLCAIHLHVRLEKLHLTFSMIIQHYRRQPHAQRRVYREVSVGNGQTADII 669
Query: 477 TFYNKIFAPTV 487
TFYN ++ ++
Sbjct: 670 TFYNSVYVQSM 680
>gi|328865754|gb|EGG14140.1| Rb-like protein [Dictyostelium fasciculatum]
Length = 1054
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 86/202 (42%), Gaps = 39/202 (19%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADLQ--------------------GANLMDNIWAE 85
TP+S++++ +W++ I ++PS DL+ NL ++
Sbjct: 396 TPISSSLSMIEWIKKSIQNYQAEPSQDLKDLVKDCGEENVQFIQTMACDALNLAQPFLSQ 455
Query: 86 Q------------RRLEALKLNYKVLETMCTAEAQVLHAKNLT-------SLFHRCMLAC 126
Q R + +KL Y +LE + E + + + T FH+ +L
Sbjct: 456 QVGSSGGIEKENKRSIYGIKLYYYLLEKILNIEKARIGSNSPTFKNFIMHGEFHKSLLIT 515
Query: 127 SAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLL 186
E+V +K V++ F ++ + F+ ++I + I+ + + P L H + ++++++
Sbjct: 516 CFEIVAHAYKLVSVEFPFFVKLFNVHPFSYCRIIDNIIKIDGAFPTNLINHFSKIDDQII 575
Query: 187 ESMVWEKGSSMYNSLTVARPAL 208
E W GS ++ +R L
Sbjct: 576 EKYAWSTGSPIFPLFEKSRDQL 597
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 415 LNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVFDHVD 474
+ + TSL N ++ I++C Y + K++Q ++FK II N G +V + D
Sbjct: 704 VTELTSLLNNRTLEIIVICSIYALCKLNQHTISFKNIIENTGTPQVYYKEVILTNNTPGD 763
Query: 475 IITFYNKIFAPTVKPLL 491
I+ FYNKIF P P++
Sbjct: 764 IVAFYNKIFLPLADPII 780
>gi|195570496|ref|XP_002103243.1| GD19061 [Drosophila simulans]
gi|194199170|gb|EDX12746.1| GD19061 [Drosophila simulans]
Length = 779
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 17/126 (13%)
Query: 372 TGINICFCKINKLAAVRINAM------VERLQLSQQIRESVYCLCPKRTLNQRTSLFFNC 425
TG++IC K LA R+ + V+ + E + L R L R
Sbjct: 559 TGLSICLRKFYGLANRRLLLLCKSLCLVDSFPQIWHLAEHSFTLESGRLLRNR------- 611
Query: 426 HIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNK 481
H+DQ++LC + ++ +L+LTF II +Y +QP + +R V DIITFYN
Sbjct: 612 HLDQLLLCAIHLHVRLEKLHLTFSMIIQHYRRQPHSRRSAYREVILGNGQTADIITFYNS 671
Query: 482 IFAPTV 487
++ ++
Sbjct: 672 VYVQSM 677
>gi|254972110|gb|ACT98283.1| rb-like protein [Schmidtea mediterranea]
Length = 1019
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 91/219 (41%), Gaps = 61/219 (27%)
Query: 384 LAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKI-S 442
L+++R+ + +RL +S+ + ++ + + + T L + IDQ+ILCC + V ++ S
Sbjct: 722 LSSLRLRDICDRLHISRDLMCKIWTTF-EHIITEETHLLKDRCIDQVILCCIFAVTRVAS 780
Query: 443 QLNLTFKEIIYNYGKQPQCKPQVFRSVFDHV----------------------------- 473
NL F EI+ Y QPQ +++RSV
Sbjct: 781 SRNLAFHEILQMYRMQPQSTREIYRSVLIESVKTNTGITTGGLPTDCKTNVHTSPGGTQR 840
Query: 474 ---------DIITFYNKIFAPT----VKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPA 520
DI FYN +F PT VK L+ G+ + + ++ + +S P
Sbjct: 841 LIRTKEVRDDITRFYNHVFLPTVHNYVKRFLINYLMSGSNVSVSLTGPNSNLSKSSSQPQ 900
Query: 521 L--PDMSP---------------KKVSATHSVYVSPLRT 542
L P +SP +++S +++VSP +T
Sbjct: 901 LNQPHLSPMPIRNNFDQILGSTSRRISNNKNIFVSPAKT 939
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 89 LEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFL 143
+ ++L YK+ A L+ ++++L FHR + A E+VL + + F
Sbjct: 502 ISKIELRYKMRSRNSEAGEIKLNNIDISALLKKDEFHRALYAICVEIVLICSDS-SKHFP 560
Query: 144 AVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTV 203
VLE + + A + K+++ F+R + LPRE+ ++ + + E L++S W S++++SL
Sbjct: 561 WVLEVLELQAVHFYKIVEIFMRCVD-LPREMVKYFSQVSENLVDSYSWRSDSTLWDSLAR 619
Query: 204 ARPA 207
+ A
Sbjct: 620 SGKA 623
>gi|195452176|ref|XP_002073245.1| GK14024 [Drosophila willistoni]
gi|194169330|gb|EDW84231.1| GK14024 [Drosophila willistoni]
Length = 807
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 17/159 (10%)
Query: 366 GEPCAET--GINICFCKINKLAAVRINAMVERLQLSQQIRES---VYCLCPKRTLNQRTS 420
+P A T G IC K LA R+ + + L I+ES ++ L +
Sbjct: 568 NQPVASTTQGPYICLRKFYSLAHQRLTRLCQALY----IKESYIHIWQLVEYSITFEGGK 623
Query: 421 LFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDII 476
L H+DQ++LC + ++++ L F +II Y +QP K V+R V DII
Sbjct: 624 LIQQRHLDQLLLCAIHLHDRLTKERLNFSDIIQQYRRQPFGKSSVYRQVVLSEGRTGDII 683
Query: 477 TFYNKIFAPTV----KPLLVELGPVGTAMKTNRDSEVNH 511
FYN+I+ +V + LL V T M + + + H
Sbjct: 684 AFYNQIYVKSVANYARKLLQSRRAVNTQMIRLKQTPLGH 722
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 69/139 (49%), Gaps = 9/139 (6%)
Query: 73 LQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACS 127
+ N ++ AE R A L YK+L+T+ T+E ++ +T L F +AC
Sbjct: 406 IMAKNCLNKQEAEARFNLASGLYYKLLKTIITSELELKPFMKITQLLEQPTFSSNFMACC 465
Query: 128 AELVLATHK--TVTMLFLAVLERI-GITAFNLSKVIQSFIRHEESL-PRELRRHLNSLEE 183
+L L + + ++F VL + ++ K+ + +RH SL R+L +HL+ +EE
Sbjct: 466 LDLALYAYDEDSDQLMFPFVLSCYPDVDPYHFQKIPELVVRHHNSLLSRQLVKHLHLVEE 525
Query: 184 RLLESMVWEKGSSMYNSLT 202
+ LES+++ S + +
Sbjct: 526 KCLESLIFRNSSQFWKCFS 544
>gi|17737995|ref|NP_524372.1| Retinoblastoma-family protein 2 [Drosophila melanogaster]
gi|7416991|gb|AAF62399.1|AF197059_1 retinoblastoma protein homolog RBF2 [Drosophila melanogaster]
gi|7300089|gb|AAF55258.1| Retinoblastoma-family protein 2 [Drosophila melanogaster]
gi|17945750|gb|AAL48923.1| RE32990p [Drosophila melanogaster]
gi|220948322|gb|ACL86704.1| Rbf2-PA [synthetic construct]
Length = 783
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Query: 372 TGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQII 431
TG +IC K LA R+ + + L L + ++ L + + L N H+DQ++
Sbjct: 561 TGSSICLRKFYGLANRRLLLLCKSLCLVDSFPQ-IWHLAEHSFTLESSRLLRNRHLDQLL 619
Query: 432 LCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV----FDHVDIITFYNKIFAPTV 487
LC + ++ +L+LTF II +Y +QP + +R V DIITFYN ++ ++
Sbjct: 620 LCAIHLHVRLEKLHLTFSMIIQHYRRQPHFRRSAYREVSLGNGQTADIITFYNSVYVQSM 679
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 92/229 (40%), Gaps = 47/229 (20%)
Query: 8 GAVNITGAKRKFDSLASPVKTITSPLSPHHSSTSKMVVTPVSTAMTTAKWLRTIICPLPS 67
GA+ G DS SP + SP H S + P S ++ II P
Sbjct: 333 GAIETKG-----DSPKSPQLAFQTSSSPSHRKLSTHDL-PASLPLS-------IIKAFPK 379
Query: 68 KPSADLQGANLMDNIWAEQRRL-------------------EALKLNYKVLETMCTAE-- 106
K AD + N +D E R +A L YK L+ + E
Sbjct: 380 KEDAD-KIVNYLDQTLEEMNRTFTMAVKDFLDAELSGKRFRQARGLYYKYLQKILGPELV 438
Query: 107 -------AQVLHAKNLTSLFHRCMLACSAELVLATHKTVTML-FLAVLERIGITAFNLSK 158
Q++ + LT+ C L + + HK V L F VL + A++ K
Sbjct: 439 QKPQLKIGQLMKQRKLTAALLACCLELALHV---HHKLVEGLRFPFVLHCFSLDAYDFQK 495
Query: 159 VIQSFIRHEES-LPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARP 206
+++ +R++ L REL +HL+ +EE L+S+++ K S ++ L P
Sbjct: 496 ILELVVRYDHGFLGRELIKHLDVVEEMCLDSLIFRKSSQLWWELNQRLP 544
>gi|7673363|gb|AAF66827.1|AF195899_1 RB-related protein RBF2 [Drosophila melanogaster]
Length = 782
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Query: 372 TGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQII 431
TG +IC K LA R+ + + L L + ++ L + + L N H+DQ++
Sbjct: 561 TGSSICLRKFYGLANRRLLLLCKSLCLVDSFPQ-IWHLAEHSFTLESSRLLRNRHLDQLL 619
Query: 432 LCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV----FDHVDIITFYNKIFAPTV 487
LC + ++ +L+LTF II +Y +QP + +R V DIITFYN ++ ++
Sbjct: 620 LCAIHLHVRLEKLHLTFSMIIQHYRRQPHFRRSAYREVSLGNGQTADIITFYNSVYVQSM 679
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 45/228 (19%)
Query: 8 GAVNITGAKRKFDSLASPVKTITSPLSPHHSSTSKMVVTPVSTAMTTAKWLRTIICPLPS 67
GA+ G DS SP + SP H S + P S ++ II P
Sbjct: 333 GAIETKG-----DSPKSPQFAFQTSSSPSHRKLSTHDL-PASLPLS-------IIKAFPK 379
Query: 68 KPSAD------------------LQGANLMDNIWAEQRRLEALKLNYKVLETMCTAE--- 106
K AD + + +D + +R +A L YK L+ + E
Sbjct: 380 KEDADKIVNYLDQTLEEMNQTFTMAVKDFLDAELSGKRFRQARGLYYKYLQKILGPELVQ 439
Query: 107 ------AQVLHAKNLTSLFHRCMLACSAELVLATHKTVTML-FLAVLERIGITAFNLSKV 159
Q++ + LT+ C L + + HK V L F VL + A++ K+
Sbjct: 440 KPQLKIGQLMKQRKLTAALLACCLELALHV---HHKLVEGLRFPFVLHCFSLDAYDFQKI 496
Query: 160 IQSFIRHEES-LPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARP 206
++ +R++ L REL +HL+ +EE LES+++ K S ++ L P
Sbjct: 497 LELVVRYDHGFLGRELIKHLDVVEEMCLESLIFRKSSQLWWELNQRLP 544
>gi|308498181|ref|XP_003111277.1| CRE-LIN-35 protein [Caenorhabditis remanei]
gi|308240825|gb|EFO84777.1| CRE-LIN-35 protein [Caenorhabditis remanei]
Length = 937
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 95/229 (41%), Gaps = 52/229 (22%)
Query: 377 CFCKINKL-AAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCF 435
C C+ AA R+ + +R+ + + + + L L T +F + HIDQIILCC
Sbjct: 721 CACRRTYFTAARRLQELTDRVSMGTRGKSQCWSLFDY-LLRNDTLVFMDRHIDQIILCCV 779
Query: 436 YGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSV------FD------------------ 471
+ + +I++ +TF EI+ Y +Q Q++R V D
Sbjct: 780 FVILRINESPITFTEILAQYRRQSTQAMQIYRHVPVFAQLLDGSNPSDLNTKETILERLE 839
Query: 472 -------HVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDM 524
VDII FYN F +K ++ ++ DS ++ + P + +
Sbjct: 840 APRKFTCKVDIIKFYNIEFRDRIKFIIGQI-----------DSALDDDLMEMPVPTIHGL 888
Query: 525 SPKKVSATHSVYVSPL-----RTSEMDALISH---SSKSYYACVGESTH 565
+P +V T + + L + S+ + I+H + +S A +G T
Sbjct: 889 TPVRVYLTDKLSIQMLPKTQKKDSKQEMAINHLERTGRSLEAALGRITE 937
>gi|348500300|ref|XP_003437711.1| PREDICTED: retinoblastoma-like protein 2-like [Oreochromis
niloticus]
Length = 403
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 63/118 (53%), Gaps = 6/118 (5%)
Query: 90 EALKLNYKVLETMCTAEAQVLHAKNLTS-----LFHRCMLACSAELVLATHKTVTMLFLA 144
EA +++LE + + E + L +++ LF RC++AC E+ + T ++ F
Sbjct: 25 EAGVWYHRILENLISQERKRLGFSDISGILEHDLFQRCLVACCLEIAV-TSNSLPCDFPL 83
Query: 145 VLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLT 202
+L+ + + ++ KVI+ R LP + HL +EE++LE++ W S +++ +T
Sbjct: 84 LLQILKLAPYHFWKVIEPVWRVGSGLPHYVVTHLIQVEEKVLENLAWTSDSPLWDEIT 141
>gi|66803613|ref|XP_635645.1| Rb-like protein [Dictyostelium discoideum AX4]
gi|60463973|gb|EAL62136.1| Rb-like protein [Dictyostelium discoideum AX4]
gi|62821759|dbj|BAD95800.1| retinoblastoma-like protein [Dictyostelium discoideum]
Length = 1312
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 85 EQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT 139
++R+ A++L Y +LE + E + N+ L FH+ +L+ S E++ +K
Sbjct: 710 QRRKNMAIQLYYCLLEKLIKFEQNT--SSNINVLLNHEDFHKSLLSNSFEIIAYVYKMEG 767
Query: 140 MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 199
+ F + + F+ ++I ++ + LP+ L +H + +EE++LE VW S++++
Sbjct: 768 LYFPHFINVFKLHPFSYLRLIDLVLKVDADLPKLLAQHFSQIEEKILEKYVWSNNSTVFS 827
Query: 200 SL 201
++
Sbjct: 828 TI 829
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 11/99 (11%)
Query: 354 PLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKR 413
P PT+ NP I K++ L + ++ + LS +Y + K
Sbjct: 880 PNTPTKKNPF----------IQNFIKKVSTLIIAKCRKLIHAMGLSSDYVVQIYQVMIKI 929
Query: 414 TLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEII 452
+++ T LF N ID +++C Y + K++ N+TFK II
Sbjct: 930 LIDE-TLLFKNREIDVLLICSIYAICKVNSKNITFKAII 967
>gi|241573931|ref|XP_002403233.1| tumor suppressor p130, putative [Ixodes scapularis]
gi|215500199|gb|EEC09693.1| tumor suppressor p130, putative [Ixodes scapularis]
Length = 574
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 394 ERLQLSQQ-IRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEII 452
+RL + Q+ IR ++ C + ++ L + H+DQ+ILC Y + K++++ +F+EI+
Sbjct: 284 QRLGIQQKDIRLKIWT-CFEHSIVNHIELMKDRHLDQLILCAVYVITKVTRVEKSFQEIL 342
Query: 453 YNYGKQPQCKPQVFRSVF 470
Y +QPQ K V+RSV
Sbjct: 343 QCYRQQPQNKSHVYRSVL 360
>gi|425876817|gb|AFY07415.1| retinoblastoma-like protein [Schmidtea mediterranea]
Length = 1034
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 90/219 (41%), Gaps = 61/219 (27%)
Query: 384 LAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKI-S 442
L+++R+ + +RL +S+ + ++ + + + T L + IDQ+ILCC + V ++ S
Sbjct: 737 LSSLRLRDICDRLHISRDLMCKIWTTF-EHIITEETHLLKDRCIDQVILCCIFAVTRVAS 795
Query: 443 QLNLTFKEIIYNYGKQPQCKPQVFRSVFDHV----------------------------- 473
NL F EI+ Y Q Q +++RSV
Sbjct: 796 SRNLAFHEILQMYRMQQQSTREIYRSVLIESVKTNTGITTGGLPTDCKTNVHTSPGGTQR 855
Query: 474 ---------DIITFYNKIFAPT----VKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPA 520
DI FYN +F PT VK L+ G+ + + ++ + +S P
Sbjct: 856 LIRTKEVRDDITRFYNHVFLPTVHNYVKRFLINYLMSGSNVSVSLTGPNSNLSKSSSQPQ 915
Query: 521 L--PDMSP---------------KKVSATHSVYVSPLRT 542
L P +SP +++S +++VSP +T
Sbjct: 916 LNQPHLSPMPIRNNFDQILGSTSRRISNNKNIFVSPAKT 954
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 89 LEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFL 143
+ ++L YK+ A L+ ++++L FHR + A E+VL + + F
Sbjct: 502 ISKIELRYKMRSRNSEAGEIKLNNIDISALLKKDEFHRALYAICVEIVLICSDS-SKHFP 560
Query: 144 AVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTV 203
VLE + + A + K+++ F+R + LPRE+ ++ + + E L++S W S++++SL
Sbjct: 561 WVLEVLELQAVHFYKIVEIFMRCVD-LPREMVKYFSQVSENLVDSYSWRSDSTLWDSLAR 619
Query: 204 ARPA 207
+ A
Sbjct: 620 SGKA 623
>gi|320165630|gb|EFW42529.1| retinoblastoma-associated protein B [Capsaspora owczarzaki ATCC
30864]
Length = 1138
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 119 FHRCMLACSAELVLA-THKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEES--LPRELR 175
FH +LAC E+ + T+LF VL I A++ KVI+ +R + L RE+
Sbjct: 646 FHLSLLACCIEISIKFGGPAETLLFPWVLTVFDIHAYDFFKVIEPVVRVCDGVFLGREVV 705
Query: 176 RHLNSLEERLLESMVWEKGSSMYNSLTVAR 205
+HL +EER+++++ W+ GS + ++ A+
Sbjct: 706 KHLGRIEERIVDTLAWKTGSPLLEAVRAAQ 735
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 20/166 (12%)
Query: 354 PLYPTRSNPGGGGEP-----CAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYC 408
P +PT +N G P + +++ K+ L +R++ + E+L L+ + + V+
Sbjct: 854 PNHPT-TNGGTFAAPSTPSRAKHSALHLFVRKVYALGYMRVSDLCEKLHLTAESKTRVWT 912
Query: 409 LCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLT-FKEIIYNYGKQPQCKPQVFR 467
+ + + L + +D +++C + +AK+ Q T FK ++ Y +QP + +
Sbjct: 913 VLTE-AIQMEPLLLRDRTLDLLVICSAFIIAKVGQDKTTSFKTLLDFYKQQPNYQRSSYE 971
Query: 468 SVF----DHVD--------IITFYNKIFAPTVKPLLVELGPVGTAM 501
V D V I+ FYN+IF P ++P P GT +
Sbjct: 972 GVLLTRADPVSGSHDTRGSIVKFYNEIFMPQLRPFASRFVPNGTEI 1017
>gi|341879504|gb|EGT35439.1| hypothetical protein CAEBREN_30365, partial [Caenorhabditis
brenneri]
Length = 828
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 385 AAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQL 444
AA R+ + +R+ + + + + L L T +F + HID I+LCC + + KI++
Sbjct: 677 AASRLQELTDRIGMGSRGKSQCWSLF-DYLLRSDTLIFMDRHIDHILLCCVFVIMKINES 735
Query: 445 NLTFKEIIYNYGKQPQCKPQVFRSV---FDHVD 474
+TF+EI+ Y +Q V+R+V +D +D
Sbjct: 736 PVTFQEILGQYRRQNSDASSVYRNVSVFYDQLD 768
>gi|17508261|ref|NP_491686.1| Protein LIN-35 [Caenorhabditis elegans]
gi|4164606|gb|AAD05570.1| synthetic multivulva protein LIN-35 Rb [Caenorhabditis elegans]
gi|351065894|emb|CCD61908.1| Protein LIN-35 [Caenorhabditis elegans]
Length = 961
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 385 AAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQL 444
AA R+ + +R+ + + + + L L T +F + H+DQI+LCC + + KI++
Sbjct: 756 AARRLQDLTDRVSMGARAKSQCWSLF-DYLLRNDTLIFMDRHLDQILLCCVFVIMKINES 814
Query: 445 NLTFKEIIYNYGKQPQCKPQVFRSV 469
++ F EI+ Y +Q V+RSV
Sbjct: 815 SMLFTEIMAQYRRQSANSLLVYRSV 839
>gi|268565519|ref|XP_002639469.1| C. briggsae CBR-LIN-35 protein [Caenorhabditis briggsae]
Length = 948
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 9/152 (5%)
Query: 331 NFTSLVKDCLLGLNN---LKSKPLPPPLYPTRSNPGGGGEPCAETG--INICFCKINKLA 385
NF +D LN +K PL R G P +T + I + A
Sbjct: 682 NFQEFGEDWADKLNTYSPMKFTPLKKSSDELRDELGRPIVPQNQTSRTLRIFLKRTYFTA 741
Query: 386 AVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLN 445
A R+ + +R+ ++ + + + + L T +F + H+DQIILCC + + ++ +
Sbjct: 742 ARRLQELTDRIAMATRPKSQCWSVF-DYLLRNDTLIFMDRHLDQIILCCVFVIMRMHGSS 800
Query: 446 LTFKEIIYNYGKQPQCKPQVFR--SVF-DHVD 474
+TF EI+ Y +Q V+R SVF D VD
Sbjct: 801 ITFHEIMGQYRRQSSSAMYVYRNVSVFRDQVD 832
>gi|403366548|gb|EJY83077.1| Retinoblastoma protein [Oxytricha trifallax]
Length = 1047
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 79 MDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTS----------LFHRCMLACSA 128
+ +I+ +Q L +++L+ + E + + +N +F R C+
Sbjct: 465 IKDIYYQQYGKSTKLLTFRILDELLIREQRTSNMQNAAEPDFSHLLSREIFLRSAFMCAV 524
Query: 129 ELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLES 188
E V + + +L +G+ AF+L +++ SF + ++ +P+ L H +E+R++
Sbjct: 525 ESVFFINMVKQVQINDLLPLVGLQAFDLWRLLHSFFKFDQQMPKSLIDHFRQIEQRIVSE 584
Query: 189 MVWEKGSSM 197
W GSS+
Sbjct: 585 SAWASGSSV 593
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 66/128 (51%), Gaps = 11/128 (8%)
Query: 378 FCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYG 437
F ++ +A+ R+ + + L L++ + E ++ + K L T L N H+DQ+++C +
Sbjct: 631 FKRVLHVASQRVFDLGKALNLNEDVLEKIWIIM-KLLLGHETQLLMNRHLDQLVMCTLFC 689
Query: 438 VAKIS-QLNLTFKEIIYNYGKQPQCKPQVFRSVFDHV--------DIITFYNKIFAPTVK 488
V ++ + +TF II Y + + + + +V+ HV DII FYN+++ +K
Sbjct: 690 VCRVHPETTITFVNIIDKYVELNR-EVRNMHNVYMHVVTNDGVKKDIIKFYNEVYIRVMK 748
Query: 489 PLLVELGP 496
+ + P
Sbjct: 749 EYIPYIKP 756
>gi|343962337|dbj|BAK62756.1| retinoblastoma-like protein 2 [Pan troglodytes]
Length = 157
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 422 FFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
+ H+DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 1 MMDRHLDQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 49
>gi|312371805|gb|EFR19899.1| hypothetical protein AND_21621 [Anopheles darlingi]
Length = 1037
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 382 NKLAAVRINAMVERLQLSQQIRES-VYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAK 440
+ +A R+ + + L L I ++ ++ + + L + H+DQ+++C + +
Sbjct: 753 DGVAYARLKDLCQSLGLDSTIIQTLIWTIFEYAITHNAKELMRDRHLDQLLMCSIFVTIR 812
Query: 441 ISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
I +L TFK+I+ Y KQPQ ++RSVF
Sbjct: 813 IKKLQNTFKDIMSCYQKQPQSSSSIYRSVF 842
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 59/125 (47%), Gaps = 13/125 (10%)
Query: 78 LMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSLFHRCMLACSAELVLATHKT 137
L++NI +RR KV+ MC + LF+ + C+AE+++ +
Sbjct: 507 LVENIIPWERRKRTNLTPSKVIYEMCAND-----------LFNETAIVCAAEIIIRLRQE 555
Query: 138 VTMLFLAVLERIGITAFNLSKVIQ-SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSS 196
F +L + + ++I+ + + + E L ++ HL +EE++++S+ W + S
Sbjct: 556 QNS-FPWILGVFEMQPLDFYRIIEVTVVANSEILTTDIVNHLRRVEEQVIDSLCWTRSSV 614
Query: 197 MYNSL 201
++ +
Sbjct: 615 LWEKM 619
>gi|47222553|emb|CAG02918.1| unnamed protein product [Tetraodon nigroviridis]
Length = 193
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 353 PPLYPTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPK 412
PP P P +++ + K+ +LA R+ + L S E + +
Sbjct: 51 PPAQPA----SQPARPLKSNSLSLFYKKLYRLAYTRLKMLCSHLLFSHPELEPIIWTLFQ 106
Query: 413 RTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQP 459
TL L + H+DQ+++C Y + K+ ++L FK I+ Y P
Sbjct: 107 HTLQHEHELMRDRHLDQLMMCAMYAICKVKIVDLRFKSIVTAYKNMP 153
>gi|195054599|ref|XP_001994212.1| GH23495 [Drosophila grimshawi]
gi|193896082|gb|EDV94948.1| GH23495 [Drosophila grimshawi]
Length = 769
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 419 TSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVFDH-----V 473
L H+DQ++LC + + L +F +II+ Y QP + V+R V+
Sbjct: 594 AELLLERHLDQLLLCAVHLCMRKLCLRSSFSDIIFQYRYQPHAQSAVYREVYMSPGQPTT 653
Query: 474 DIITFYNKIFAPTV 487
DII+FYN+ + P +
Sbjct: 654 DIISFYNRCYVPRM 667
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 107 AQVLHAKNLTSLFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRH 166
Q L KN F+ ++AC +L+L + T+ +L+ I A+ K+I+ + H
Sbjct: 443 GQFLMQKNR---FNATLIACCLQLMLHILGS-TLQLQWLLQLFAINAYEFHKIIELVVTH 498
Query: 167 -EESLPRELRRHLNSLEERLLESMVWEKGSSMY 198
L R L +HL LE R L+S++W++ S ++
Sbjct: 499 GRHLLTRNLAKHLGDLEVRCLDSLIWQRNSPLW 531
>gi|444729193|gb|ELW69620.1| Retinoblastoma-like protein 1 [Tupaia chinensis]
Length = 697
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 159 VIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
VI+ IR EE L R++ +HLNS+EE++LES+ W S ++ +L +
Sbjct: 248 VIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWSHSSVLWETLQAS 293
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 26/134 (19%)
Query: 457 KQPQCKPQVFRSVFDHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA- 515
K P C + + + D+I FYN I+ VK A+K + ++ +H DA
Sbjct: 543 KTPDCSSEPMKE--ERGDLIKFYNTIYVGRVKSF---------ALKYDLSNQ-DHVMDAP 590
Query: 516 --SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFK 571
S FP + SP+++S HSVYVSP ++ + ++ S Y G SP K
Sbjct: 591 PLSPFPHIKQQPGSPRRISQQHSVYVSPHKSG---SGLTPRSALLYKFNG------SPSK 641
Query: 572 DLTDINHRLNSNRR 585
L DIN+ + +
Sbjct: 642 SLKDINNMIRQGEQ 655
>gi|158295912|ref|XP_316517.4| AGAP006477-PA [Anopheles gambiae str. PEST]
gi|157016260|gb|EAA11652.4| AGAP006477-PA [Anopheles gambiae str. PEST]
Length = 918
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 421 LFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
L + H+DQ+++C + +I +L TFK+I++ Y QPQ ++RSVF
Sbjct: 650 LMRDRHLDQLLMCAIFVTMRIKKLPNTFKQIMHCYHSQPQANSSIYRSVF 699
>gi|145541634|ref|XP_001456505.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424317|emb|CAK89108.1| unnamed protein product [Paramecium tetraurelia]
Length = 886
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 81/179 (45%), Gaps = 30/179 (16%)
Query: 374 INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILC 433
+N F ++ A +I + L+L +Q +E ++ + K ++++T + +DQ++L
Sbjct: 584 MNRLFKRVLHYCAFQIQIICSNLKLQEQFQEYIW-ITIKYIISEKTDHLRHHSLDQVVLA 642
Query: 434 CFYGVAKISQLNLTFKEIIYNYG-----------KQPQCKPQVFRSVFDHVDIITFYNKI 482
Y V K++ L F++II Y K+ C + DI+++YN+
Sbjct: 643 SIYAVTKLTGNQLKFQQIINAYEITNTWYSKQFIKKIVCNTYISNDSMG--DIVSYYNQS 700
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLR 541
F P +K ++++ +E+ NN P P M+ K + + + SPLR
Sbjct: 701 FIPQIKSFMLQMS-----------TEIKSNN----VPQSP-MNNKNPALNNKILDSPLR 743
>gi|145536055|ref|XP_001453755.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421488|emb|CAK86358.1| unnamed protein product [Paramecium tetraurelia]
Length = 886
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 80/179 (44%), Gaps = 30/179 (16%)
Query: 374 INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILC 433
+N F ++ A +I + ++L +Q++E ++ + K ++++T +DQI+L
Sbjct: 584 MNRLFKRVLHYCAFQIQVICSNIKLQEQLQEYIW-ITIKYIISEKTDHLRYHSLDQIVLA 642
Query: 434 CFYGVAKISQLNLTFKEIIYNYG-----------KQPQCKPQVFRSVFDHVDIITFYNKI 482
Y V K++ L F++II Y K+ C + DI+++YN+
Sbjct: 643 SIYAVTKLTGNQLKFQQIINAYELTNTWYSKQFIKKIVCNTYISNDSMG--DIVSYYNQS 700
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLR 541
F P +K ++++ E+ NN P P M+ K + + + SPLR
Sbjct: 701 FIPQIKSFMLQMS-----------HEIKSNN----VPQSP-MNNKNPALNNKILDSPLR 743
>gi|168043606|ref|XP_001774275.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674402|gb|EDQ60911.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1124
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 9 AVNITGAKRKFDSLASPVKTITSPLSP-------HHSSTSKMVVTPVSTAMTTAKWLRTI 61
AV G R S ASP SP S ST K TPVS MTTAKWLRT+
Sbjct: 1059 AVTSAGQGRAVSSGASPSSPCGSPESSPAVMGGVAGGSTCKPPPTPVSITMTTAKWLRTV 1118
Query: 62 ICPL 65
I PL
Sbjct: 1119 IAPL 1122
>gi|222091768|gb|ACM43280.1| retinoblastoma 1 [Peromyscus polionotus subgriseus]
Length = 48
Score = 43.1 bits (100), Expect = 0.41, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 142 FLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLES 188
F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES
Sbjct: 2 FPWILNVLNLKAFDFYKVIESFIKVETNLTREMIKHLERCEHRIMES 48
>gi|118369190|ref|XP_001017800.1| hypothetical protein TTHERM_00439030 [Tetrahymena thermophila]
gi|89299567|gb|EAR97555.1| hypothetical protein TTHERM_00439030 [Tetrahymena thermophila
SB210]
Length = 1042
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 372 TGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQII 431
+ I F ++ A IN + L+L+ +I E+V+ + K L ++ + HIDQ++
Sbjct: 576 SAIEKFFRRVLHQCAYTINQVCSALKLNDKISEAVWRIM-KHILANQSDILLGRHIDQLV 634
Query: 432 LCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-------DHVD-IITFYNKIF 483
+C Y + K+ + FK+I+ Y + + R + + +D I+++YN ++
Sbjct: 635 ICSIYIMCKLFKSETIFKQILNKYEELNSHNKAMMRELIYAMPIAPNKLDTIVSYYNNVY 694
Query: 484 APTVKPLLVEL 494
VK V++
Sbjct: 695 LGFVKEAAVQI 705
>gi|373952733|ref|ZP_09612693.1| carboxyl-terminal protease [Mucilaginibacter paludis DSM 18603]
gi|373889333|gb|EHQ25230.1| carboxyl-terminal protease [Mucilaginibacter paludis DSM 18603]
Length = 701
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Query: 321 DYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLYPTRSNPGGGGEPCAETGINICFCK 380
DY++ N+ S +D L L+ LK K + + R N GG IN+
Sbjct: 374 DYKAYEAGDRNYKSTTRDVKLLLDTLKQKKVDGVMIDLRGNGGG----SLTEAINLTGLF 429
Query: 381 INKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTS 420
I V++ + +++Q+SQ + S+Y P L RTS
Sbjct: 430 IASGPVVQVRDVNQKIQVSQDLDPSIYYSGPMAVLVDRTS 469
>gi|146163474|ref|XP_001011496.2| hypothetical protein TTHERM_00784380 [Tetrahymena thermophila]
gi|146146033|gb|EAR91251.2| hypothetical protein TTHERM_00784380 [Tetrahymena thermophila
SB210]
Length = 1158
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 16/117 (13%)
Query: 385 AAVRINAMVERLQLSQQIRESVY--CLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKIS 442
+A R+ + + L+L +I+E ++ L R+ + L ++DQII+C Y ++ IS
Sbjct: 791 SATRVKEISKILELDDKIQERIWEALLYVYRS---QLQLMNRRYVDQIIICSIYALSLIS 847
Query: 443 QLNLTFKEIIYNYGKQPQCK-------PQVFRSVFDH---VDIITFYNKIFAPTVKP 489
KEI + G C+ +V ++ D +DII FYN+IF +KP
Sbjct: 848 AELFVGKEIKFK-GMLSACENLLHFNSEKVKKTTNDQGESIDIINFYNQIFLKPMKP 903
>gi|449669985|ref|XP_004207166.1| PREDICTED: retinoblastoma-like protein 1-like [Hydra
magnipapillata]
Length = 601
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 410 CPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRS- 468
C + +L + + H+DQ+++C Y ++K++ + +F+EI+ Y QPQ V +S
Sbjct: 519 CFEHSLVSNIDMLRDRHVDQLLMCAIYIMSKVTNEDKSFREIMKWYRTQPQASSDVTKSA 578
Query: 469 ------VFDHVD 474
+F HV+
Sbjct: 579 TISIVHLFKHVN 590
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 83/166 (50%), Gaps = 30/166 (18%)
Query: 50 TAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNY---------KVLE 100
T T+ L+ ++ L + PS +L+ L D+ + +L+++ Y K +E
Sbjct: 263 TITTSVSKLQELLNGLKASPSNNLKS--LFDDQVKAEEKLKSIIAEYSTIFLNAYVKPME 320
Query: 101 TMCTAEAQVLHAKNLTSLFHRCMLACSAELVLATHKTVTMLFLAVLERIGI-----TAFN 155
+ A +++ +N+ F + L + +LF +LE + +A +
Sbjct: 321 SSADALSEI-SDENINKDFAKTRLHLAV-----------VLFYKILEDFFVEEKKKSAAD 368
Query: 156 LSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 201
LS +I+ IR ++ L R++ +HL+ +EE++LE++ W+ GS ++ ++
Sbjct: 369 LS-IIELVIRGQD-LSRDVIKHLSKIEEQILETLSWKSGSPVFTAI 412
>gi|432852990|ref|XP_004067486.1| PREDICTED: retinoblastoma-like protein 2-like, partial [Oryzias
latipes]
Length = 365
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 384 LAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQ 443
+ A R+ + +L+LS +R S++ C + +L Q L N H+DQ++ Y A++++
Sbjct: 269 MTAARLEDLGSKLKLSGDLRRSIWT-CFENSLVQHPRLMVNHHLDQLLFSSIYITAQVTR 327
Query: 444 LNLTFKEIIYNY 455
LT +I+ Y
Sbjct: 328 TTLTVSDIMDAY 339
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 68/132 (51%), Gaps = 17/132 (12%)
Query: 96 YKVLETMCTAEAQVLHAKNLTSLFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFN 155
+++L+ M ++ L++ FHRC++AC E+ +A++ + F +L + +T ++
Sbjct: 76 FRILKNMMERRVISDNSGLLSNGFHRCLVACCLEVQIASNH-LPCDFPQLLRILQLTPYH 134
Query: 156 LSKVIQSFIRHEESLPRELRRH------LNSLEERLLESMVWEKGSSMYNSLTV--ARPA 207
L KVI+ L R L +H L+ +++++LES+ W S ++ + R
Sbjct: 135 LIKVIE--------LVRTLDQHYHVCKSLSQVKQQILESLAWTGDSPLWEEIQANGGRFP 186
Query: 208 LSAEINLGFTDI 219
L +++ +D+
Sbjct: 187 LIQQVDTDRSDL 198
>gi|312094649|ref|XP_003148094.1| hypothetical protein LOAG_12534 [Loa loa]
Length = 465
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 101 TMCTAEAQVLHAKNLTSLFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVI 160
T C A +L L +L+ CS +LVL T+++V F LE + + A + KVI
Sbjct: 392 TECLFSAVLLREDFLKALY-----VCSLQLVLFTYESVRE-FPWSLETMHLPAIHFYKVI 445
Query: 161 QSFIRHEESLPRELRRHLN 179
+ IR + SL RE+ +HLN
Sbjct: 446 ELIIRADSSLSREMVKHLN 464
>gi|195166813|ref|XP_002024229.1| GL22656 [Drosophila persimilis]
gi|194107584|gb|EDW29627.1| GL22656 [Drosophila persimilis]
Length = 387
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 91 ALKLNYKVLETMCTAEAQVL-HAKNLTSLFHRCM----LACSAELVLATH--KTVTMLFL 143
A +L Y+ L+ + +E + H K + L R + +AC EL L + + F
Sbjct: 220 ACRLYYQFLQRIIGSELLLKPHLKMVQLLKQRTLSVTLVACCLELALRIREDRVEELKFP 279
Query: 144 AVLERIGITAFNLSKVIQSFIRHEESL-PRELRRHLNSLEERLLESMVWEKGSSMYNSLT 202
+L+ + A+ K+++ +RH L R+L +HL ++E+ L S+++ SS + L
Sbjct: 280 FILKCYSLDAYEFQKILELVVRHRTGLIGRDLIKHLQAVEDECLGSLMFRGDSSFWKILG 339
Query: 203 VAR 205
A+
Sbjct: 340 KAQ 342
>gi|86370952|gb|ABC94614.1| chromodomain-helicase-DNA-binding protein 6 [Ictalurus punctatus]
Length = 199
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 20/110 (18%)
Query: 471 DHVDIITFYNKIFAPTVKPLLVELG-PVGTAMKTNRDSEVNHNNDASVFPAL--PDMSPK 527
D D+I FYN ++ +K + P DS VN S FP+L +SP+
Sbjct: 57 DRGDLIQFYNSVYVLKMKSFALRYTHPAA-------DSRVN-APPLSPFPSLRAQPLSPR 108
Query: 528 KVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDIN 577
++S HSVY+SP + + + SS Y G SP K+L+DIN
Sbjct: 109 RISQRHSVYLSPHKNG---SCLKPSSAYTYKFSG------SPSKELSDIN 149
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.133 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,594,510,876
Number of Sequences: 23463169
Number of extensions: 393747355
Number of successful extensions: 975521
Number of sequences better than 100.0: 448
Number of HSP's better than 100.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 972911
Number of HSP's gapped (non-prelim): 1303
length of query: 633
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 484
effective length of database: 8,863,183,186
effective search space: 4289780662024
effective search space used: 4289780662024
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)