BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046343
(633 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B9SVG9|RBR_RICCO Retinoblastoma-related protein OS=Ricinus communis GN=RBR PE=2 SV=1
Length = 1020
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/717 (62%), Positives = 489/717 (68%), Gaps = 155/717 (21%)
Query: 9 AVNITGAKRKFDSLASPVKTITSPLSPHHS-----------STSKMVVTPVSTAMTTAKW 57
A+++TG KRKFD ++SP KTITSPLSPH S + S+M TPVSTAMTTAKW
Sbjct: 367 AISVTGTKRKFDQISSPTKTITSPLSPHRSPASHTNGILGSTNSRMAATPVSTAMTTAKW 426
Query: 58 LRTIICPLPSKPS-----------------------------------------ADLQGA 76
LRT+I PLPSKPS LQ
Sbjct: 427 LRTVISPLPSKPSPQLERFLASCDRDVTNDVIRRAHIILEAIFPSNALGERCVTGSLQST 486
Query: 77 NLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELV 131
NLMDNIWAEQRRLEALKL Y+VLE MCTAEAQ+LHA NLTSL FHRCMLACSAELV
Sbjct: 487 NLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQILHATNLTSLLTNERFHRCMLACSAELV 546
Query: 132 LATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
LATHKTVTMLF AVLER GITAF+LSKVI+SFIRHEESLPRELRRHLNSLEERLLESMVW
Sbjct: 547 LATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVW 606
Query: 192 EKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYEN 250
EKGSSMYNSLTVARP+LSAEIN LG
Sbjct: 607 EKGSSMYNSLTVARPSLSAEINRLGL---------------------------------- 632
Query: 251 LPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFY 310
L PMPSLDAIA+HINFSSGGL P+ S+ KHE SP
Sbjct: 633 ---------------LAEPMPSLDAIAVHINFSSGGLPPLSSVSKHEISP---------- 667
Query: 311 ANCYGELVT-----DDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRS 360
G++ + DYRSVLVERN+FTS VKD LL NLKSK PPPL PTR
Sbjct: 668 -GQNGDIRSPKRPCTDYRSVLVERNSFTSPVKDRLLAFTNLKSKLPPPPLQSAFASPTRP 726
Query: 361 NPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQ-IRESVYCLCPKRTLNQRT 419
NPGGGGE CAETGINI F KINKLAAVRIN MVERLQ SQQ IRE+VY L ++ L+Q+T
Sbjct: 727 NPGGGGETCAETGINIFFSKINKLAAVRINGMVERLQQSQQHIRENVYRLF-QQVLSQQT 785
Query: 420 SLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------- 470
SLFFN HIDQIILCCFYGVAKIS++NLTF+EIIYNY KQPQCKPQVFRSVF
Sbjct: 786 SLFFNRHIDQIILCCFYGVAKISKVNLTFREIIYNYRKQPQCKPQVFRSVFVDWSSARHN 845
Query: 471 -----DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA--------SV 517
DHVDIITFYN+IF P KPLLVE+G G +K ++ EVN+N D S
Sbjct: 846 GRTGQDHVDIITFYNEIFIPAAKPLLVEVGSAGITVKGSQVPEVNNNKDGQCPASPKVSP 905
Query: 518 FPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDI 576
FP+LPDMSPKKVSA H+VYVSPLRTS+MDALISHSSKSYYACVGESTHAY SP KDLT I
Sbjct: 906 FPSLPDMSPKKVSAAHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAI 965
Query: 577 NHRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPEQLDP 633
N+RLN NR +RG+LNFD DVDVGLVSDSMV SLYLQNGS A+++ A LK EQ DP
Sbjct: 966 NNRLNGNRNIRGSLNFD--DVDVGLVSDSMVAKSLYLQNGSCASTSGAPLKTEQPDP 1020
>sp|A7P514|RBR_VITVI Retinoblastoma-related protein OS=Vitis vinifera GN=RBR PE=2 SV=1
Length = 1007
Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/708 (62%), Positives = 491/708 (69%), Gaps = 148/708 (20%)
Query: 9 AVNITGAKRKFDSLASPVKTITSPLSPHHS------STSKMVVTPVSTAMTTAKWLRTII 62
A++I+GAKRK DSLASP KTITSPLSP+ S + SKM TPV+TAMTTAKWLRT+I
Sbjct: 363 AMSISGAKRKIDSLASPAKTITSPLSPNRSPGILGGANSKMAPTPVTTAMTTAKWLRTVI 422
Query: 63 CPLPSKPSADLQ--------------------------------------GANLMDNIWA 84
PLPSKPSA+L+ A+LMD+IWA
Sbjct: 423 SPLPSKPSAELERFLTSCDKDVTSDVIRRANVILEAIFPSIAFGERCVTGSASLMDSIWA 482
Query: 85 EQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT 139
+QRR+EA+KL Y+VLE MCTAEAQVLHA NLTSL FHRCMLACSAELVLATHKTVT
Sbjct: 483 QQRRMEAMKLYYRVLEAMCTAEAQVLHANNLTSLLTNERFHRCMLACSAELVLATHKTVT 542
Query: 140 MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 199
MLF AVLER GITAF+LSKVI+SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN
Sbjct: 543 MLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 602
Query: 200 SLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEPF 258
SL VAR ALSAE+N LG
Sbjct: 603 SLIVARAALSAEVNRLG------------------------------------------- 619
Query: 259 TEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGEL- 317
L PMPSLDAI+MHIN S GGL PV SL K E+SP G++
Sbjct: 620 ------LLAEPMPSLDAISMHINASCGGLPPVPSLQKRESSP-----------GQNGDIR 662
Query: 318 ----VTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGGGGEP 368
V DYRSVLVERN+FTS VKD L LNNLKSK PPPL PTR NPG GE
Sbjct: 663 SPKRVCPDYRSVLVERNSFTSPVKDRFLALNNLKSKLPPPPLQSAFASPTRPNPGREGET 722
Query: 369 CAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHID 428
CAETGINI F KI KLAAVRIN MVERLQLSQQ+RE+VYCL ++ LN+RTSLFFN HID
Sbjct: 723 CAETGINIFFSKIIKLAAVRINGMVERLQLSQQMRENVYCLF-QQILNRRTSLFFNRHID 781
Query: 429 QIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DHVD 474
QIILCCFYG+AKISQ+NLTF+EII+NY KQPQCKPQ+FRSVF +HVD
Sbjct: 782 QIILCCFYGLAKISQMNLTFREIIHNYRKQPQCKPQIFRSVFVDWSSARRNGKTGKEHVD 841
Query: 475 IITFYNKIFAPTVKPLLVEL-GPVGTAMKTNRDSEVNHNNDA--------SVFPALPDMS 525
IITFYN+IF P VKPLL+E+ GT KTNR EVN+NNDA S FP+LPDMS
Sbjct: 842 IITFYNEIFIPAVKPLLMEIGPGGGTTTKTNRVPEVNNNNDAQCPESPKISPFPSLPDMS 901
Query: 526 PKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNR 584
PKKVSA H+VYVSPLR+S+MDALISHSSKSYYACVGESTHAY SP KDLT IN+RLNS R
Sbjct: 902 PKKVSAAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNSTR 961
Query: 585 RVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPEQLD 632
++RGALNFDDV+ GLVSDS+V SLYLQNGS A+S+ A LK EQ D
Sbjct: 962 KLRGALNFDDVE---GLVSDSLVAKSLYLQNGSCASSSGAPLKLEQPD 1006
>sp|B9GLX8|RBR_POPTR Retinoblastoma-related protein OS=Populus trichocarpa GN=RBL901 PE=2
SV=1
Length = 1035
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/723 (60%), Positives = 488/723 (67%), Gaps = 156/723 (21%)
Query: 2 SGSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHS-----------STSKMVVTPVST 50
SGS+ G++NITGAKRKFD ++SP KTITSPLSPH S + SKM TPVST
Sbjct: 376 SGSVSAGSLNITGAKRKFDLISSPTKTITSPLSPHRSPASHANGIPGSANSKMAATPVST 435
Query: 51 AMTTAKWLRTIICPLPSKPSADL------------------------------------- 73
AMTTAKWLRTII PLPSKPSA L
Sbjct: 436 AMTTAKWLRTIISPLPSKPSAQLERFLVSCDKDVTNDVIRRAQIILEAIFPSSSLGERCV 495
Query: 74 ----QGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
Q NLMDNIWAEQRRLEALKL Y+VLE+MCTAEAQ+LHA NLTSL FHRCML
Sbjct: 496 NGSLQSTNLMDNIWAEQRRLEALKLYYRVLESMCTAEAQILHATNLTSLLTNERFHRCML 555
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
ACSAELV+AT+KTVTMLF AVLER GITAF+LSKVI+SFIRHEESLPRELRRHLNSLEER
Sbjct: 556 ACSAELVVATYKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEER 615
Query: 185 LLESMVWEKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSP 243
LL+SMVWEKGSS+YNSLTVARPALSAEIN LG
Sbjct: 616 LLDSMVWEKGSSLYNSLTVARPALSAEINRLGL--------------------------- 648
Query: 244 TRQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCS 303
L PMPSLDAIAMHINFSSG L PV SL KHETSP
Sbjct: 649 ----------------------LAEPMPSLDAIAMHINFSSGCLPPVPSLQKHETSP--- 683
Query: 304 IFNFQFYANCYGELVT-----DDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-- 356
+ G+L + D+RSVLVERN+FTS VKD LLG NLKSK PPPL
Sbjct: 684 ------GSGQNGDLRSPKRPCTDFRSVLVERNSFTSPVKDRLLG--NLKSKLPPPPLQSA 735
Query: 357 ---PTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQ-IRESVYCLCPK 412
PTR NPGGGGE CAETGIN+ F KINKLAAVRIN M+E+LQ SQQ IRE+VY L +
Sbjct: 736 FASPTRPNPGGGGETCAETGINVFFTKINKLAAVRINGMIEKLQPSQQHIRENVYRLF-Q 794
Query: 413 RTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-- 470
L+ +TSLFFN HIDQIILCCFYGVAKIS+LNLTF+EIIYNY +QP CK VFRSVF
Sbjct: 795 LILSHQTSLFFNRHIDQIILCCFYGVAKISKLNLTFREIIYNYRRQPHCKTLVFRSVFVD 854
Query: 471 ------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA--- 515
DHVDIITFYN+IF P KPLLV++G GT +K + EV +N D
Sbjct: 855 WSSARHNGRTGQDHVDIITFYNEIFIPAAKPLLVDVGSAGTTVKASNVPEVGNNKDGQCP 914
Query: 516 -----SVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SP 569
S FP+LPDMSPKKVS+ H+VYVSPLR+S+MDALIS+SSKSYYACVGESTHAY SP
Sbjct: 915 ASPKVSPFPSLPDMSPKKVSSAHNVYVSPLRSSKMDALISNSSKSYYACVGESTHAYQSP 974
Query: 570 FKDLTDINHRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPE 629
KDL IN+RLN NR+ RG LN D+ DVGLVSDSMV NSL LQNG+ A+++ A LK E
Sbjct: 975 SKDLNAINNRLNGNRKARGTLNLDN---DVGLVSDSMVANSLGLQNGNCASTSGAALKSE 1031
Query: 630 QLD 632
Q D
Sbjct: 1032 QSD 1034
>sp|Q4JF75|RBR_SCUBA Retinoblastoma-related protein OS=Scutellaria baicalensis GN=RB PE=2
SV=1
Length = 1006
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/697 (60%), Positives = 477/697 (68%), Gaps = 137/697 (19%)
Query: 14 GAKRKFDSLASPVKTITSPLSPHHS-----------STSKMVVTPVSTAMTTAKWLRTII 62
G KRK D+++SP KTITSPLSPH S SKM TPV+TAMTTAKWLRT+I
Sbjct: 368 GTKRKLDAMSSPAKTITSPLSPHRSPICHSNGFIVGGISKMASTPVTTAMTTAKWLRTVI 427
Query: 63 CPLPSKPSADL---------------------------------QGANLMDNIWAEQRRL 89
PLPSKPSA+L Q A+LMDNIWAEQRR+
Sbjct: 428 APLPSKPSAELEKFLTSCDRDVTPDVTRRAQIILEAIFPSSGLGQNASLMDNIWAEQRRM 487
Query: 90 EALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLA 144
EA+KL ++VL+ +CTAE+Q+LHA NLTSL FHRCMLACSAELVLATHKTVTMLF
Sbjct: 488 EAMKLYFRVLQALCTAESQILHANNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPT 547
Query: 145 VLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
VLER GITAF+LSKVI+SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL VA
Sbjct: 548 VLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLIVA 607
Query: 205 RPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEPFTEVDS 263
RPALSAEI+ LG
Sbjct: 608 RPALSAEISRLGL----------------------------------------------- 620
Query: 264 IFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELVTDDYR 323
L PMPSLDAIAMH N S G L P+ +L KHE + Q + V +YR
Sbjct: 621 --LAEPMPSLDAIAMHNNMSCGVLPPMQALLKHEK-------HGQNGDIRSPKRVCTEYR 671
Query: 324 SVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGGGGEPCAETGINICF 378
SVLVERN+FTS VKD LL LNNLKSK PP L+ PTR +PGGGGE CAET +N+ F
Sbjct: 672 SVLVERNSFTSPVKDRLLALNNLKSKFPPPILHSAFASPTRPSPGGGGETCAETAVNVFF 731
Query: 379 CKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGV 438
KI KLAAVRIN MVERLQLSQQIRESVYCL K L+QRT+LFFN HIDQI+LCCFYGV
Sbjct: 732 SKIVKLAAVRINGMVERLQLSQQIRESVYCLFQK-ILSQRTTLFFNRHIDQILLCCFYGV 790
Query: 439 AKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DHVDIITFYNKIFA 484
+KISQL LTFKEII+NY KQPQCKPQVFR+V+ DHVDIITFYN+IF
Sbjct: 791 SKISQLTLTFKEIIFNYRKQPQCKPQVFRNVYVDWKALRRTGKSGPDHVDIITFYNEIFV 850
Query: 485 PTVKPLLVELGPVGTAMKTNRDSEVNHNNDA--------SVFPALPDMSPKKVSATHSVY 536
P VKPLLVE+ P G+A ++ E +N + S FP+LPDMSPKKVSA H+VY
Sbjct: 851 PAVKPLLVEIAPGGSAQSGSQVPEAKNNTNGVNPSSPRTSSFPSLPDMSPKKVSAAHNVY 910
Query: 537 VSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNRRVRGALNFDDV 595
VSPLR+S+MDALISHSS+SYYACVGESTHAY SP KDLT IN+RLN NR+VRG LNFD
Sbjct: 911 VSPLRSSKMDALISHSSRSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVRGTLNFD-- 968
Query: 596 DVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPEQLD 632
DVDVGLV+DS+V NSLY+QNGS A+S+ V+K EQ D
Sbjct: 969 DVDVGLVTDSVVANSLYVQNGSCASSSHMVVKSEQQD 1005
>sp|Q66WV0|RBR1_NICBE Retinoblastoma-related protein 1 OS=Nicotiana benthamiana GN=RBR1
PE=2 SV=1
Length = 1003
Score = 747 bits (1928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/702 (60%), Positives = 475/702 (67%), Gaps = 145/702 (20%)
Query: 9 AVNITGAKRKFDSLASPVKTITSPLSPHHS---STSKM-VVTPVSTAMTTAKWLRTIICP 64
AVN+ G KRKFD++ASP KT+TS LSP+ S + SKM TPVSTAMTTA+WLRT+I P
Sbjct: 364 AVNMNGTKRKFDAMASPAKTVTSTLSPYRSPNCANSKMTAATPVSTAMTTARWLRTVIAP 423
Query: 65 LPSKPSAD------------------------------------------LQGANLMDNI 82
L KPSA+ LQ +LMDNI
Sbjct: 424 LQPKPSAELERFLSSCDRDVTADVIRRAQIILEAIFPSSGPAEHCAAGGSLQSTSLMDNI 483
Query: 83 WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKT 137
WAEQRR EALKL Y+VL+TMCTAE+Q+L+ NLTSL FHRCMLACSAELVLATHKT
Sbjct: 484 WAEQRRSEALKLYYRVLQTMCTAESQILNGNNLTSLLTNERFHRCMLACSAELVLATHKT 543
Query: 138 VTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSM 197
VTMLF AVLER GITAF+LSKVI+SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSM
Sbjct: 544 VTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSM 603
Query: 198 YNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKE 256
YNSL VA+P+L+AEIN +G
Sbjct: 604 YNSLAVAKPSLAAEINRMG----------------------------------------- 622
Query: 257 PFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGE 316
L PMPSLDAIAMHIN SSG L P+ SLHK+ +P I + + +
Sbjct: 623 --------LLAEPMPSLDAIAMHINLSSGSLPPLPSLHKNNLAPNGQIGDIR-----SPK 669
Query: 317 LVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGGGGEPCAE 371
V +YRSVLVERN+FTS VKD L LNN+KSK PP L+ PTR NPGGGGE CAE
Sbjct: 670 KVCSEYRSVLVERNSFTSPVKDRFLALNNIKSKFPPPALHSAFASPTRPNPGGGGETCAE 729
Query: 372 TGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQII 431
T IN+ F KI KLAAVRIN M+ERLQLSQQIRE+VYCL ++ L+QRTSLFFN HIDQII
Sbjct: 730 TAINVFFGKIVKLAAVRINGMIERLQLSQQIRETVYCLF-QKILSQRTSLFFNRHIDQII 788
Query: 432 LCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DHVDIIT 477
LC FYGVAKISQLNLTFKEII NY KQPQCKPQVFRSVF DHVDIIT
Sbjct: 789 LCSFYGVAKISQLNLTFKEIICNYRKQPQCKPQVFRSVFVDWTLARHNVRTGADHVDIIT 848
Query: 478 FYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA--------SVFPALPDMSPKKV 529
FYN++F P+VKPLLVEL P G +SE N +ND S FP LPDMSPKKV
Sbjct: 849 FYNEMFIPSVKPLLVELAPAGN------NSEKNDHNDGQGPASPKPSPFPKLPDMSPKKV 902
Query: 530 SATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNRRVRG 588
SA H+VYVSPLR S+MDALISHSSKSYYACVGESTHAY SP KDL IN+RLN NR++RG
Sbjct: 903 SAVHNVYVSPLRASKMDALISHSSKSYYACVGESTHAYQSPSKDLDVINNRLNGNRKLRG 962
Query: 589 ALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPEQ 630
ALNF DVD GLVSDS+V NSLYLQNG+ S A +K EQ
Sbjct: 963 ALNF---DVDAGLVSDSIVANSLYLQNGN-CRSPVAHVKTEQ 1000
>sp|Q9SLZ4|RBR1_PEA Retinoblastoma-related protein 1 OS=Pisum sativum GN=RBR1 PE=2 SV=1
Length = 1026
Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/725 (60%), Positives = 484/725 (66%), Gaps = 152/725 (20%)
Query: 1 SSGSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHS-----------STSKMVVTPVS 49
+SGSL G+V+ G KRK D + SP K ITSPLSPH S +T + TPVS
Sbjct: 360 ASGSLSRGSVSAGGVKRKIDLMTSPTKMITSPLSPHRSPASHANGIPSSATPMIAATPVS 419
Query: 50 TAMTTAKWLRTIICPLPSKPSADL------------------------------------ 73
TAMTTAKWLRT+I PLPSKPS +L
Sbjct: 420 TAMTTAKWLRTVISPLPSKPSQELERFLTSCDKDITSDVIRRAQIILQAIFPSSPLGDRC 479
Query: 74 -----QGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCM 123
Q ANLMDNIWAEQRRLEALKL Y+VL TMC AEAQ+L NLTSL FHRCM
Sbjct: 480 VTGSLQSANLMDNIWAEQRRLEALKLYYRVLATMCRAEAQIL-GNNLTSLLTNERFHRCM 538
Query: 124 LACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEE 183
LACSAELVLATHKTVTMLF AVLER GITAF+LSKVI+SFIR+EESLPRELRRHLNSLEE
Sbjct: 539 LACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRYEESLPRELRRHLNSLEE 598
Query: 184 RLLESMVWEKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDS 242
RLLES+VWEKGSSMYNSL VARPALS EIN LG
Sbjct: 599 RLLESLVWEKGSSMYNSLAVARPALSVEINRLGL-------------------------- 632
Query: 243 PTRQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVC 302
L PM SLD IAM INFS GGL PV SL K E P+
Sbjct: 633 -----------------------LAEPMRSLDEIAMDINFSCGGLPPVPSLPKPE--PMS 667
Query: 303 SIFNFQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----P 357
+ Q + ++R+VL ERN+FTS VKD LL L+NLKSK LPPPL P
Sbjct: 668 A----QNGDPRSPKRPCTEHRNVLAERNSFTSPVKDRLLHLSNLKSKLLPPPLQSAFASP 723
Query: 358 TRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQ 417
T+ NPGGGGE CAETGI++ F KI KL AVRI+ MVERLQLSQQIRE+VYCL +R LNQ
Sbjct: 724 TKPNPGGGGETCAETGISVFFSKIVKLGAVRISGMVERLQLSQQIRENVYCLF-QRILNQ 782
Query: 418 RTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------- 470
TSLFFN HIDQIILCCFYGVAKISQLNLTF+EIIYNY KQPQCKP+VFRSVF
Sbjct: 783 WTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPEVFRSVFVDWSSAR 842
Query: 471 -----------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA---- 515
+H+DII+FYN++F P+VKPLLVE+GP G + +R E N+ ND
Sbjct: 843 RNGSCKQRTGQEHIDIISFYNEVFIPSVKPLLVEIGPGGATTRNDRIPEANNKNDGHLAQ 902
Query: 516 -------SVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY- 567
S FP+LPDMSPKKVSATH+VYVSPLR+S+MDALISHSSKSYYACVGESTHAY
Sbjct: 903 CPGSPRISPFPSLPDMSPKKVSATHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQ 962
Query: 568 SPFKDLTDINHRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLK 627
SP KDLT IN+RLN NR+VRG LNFD DVDVGLVSDSMV NSLYLQNGS+A+S+ A LK
Sbjct: 963 SPSKDLTAINNRLNGNRKVRGPLNFD--DVDVGLVSDSMVANSLYLQNGSSASSSGAPLK 1020
Query: 628 PEQLD 632
EQ D
Sbjct: 1021 SEQPD 1025
>sp|A9UL14|RBR_MEDSA Retinoblastoma-related protein OS=Medicago sativa GN=RBR PE=2 SV=1
Length = 1025
Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/709 (60%), Positives = 474/709 (66%), Gaps = 150/709 (21%)
Query: 16 KRKFDSLASPVKTITSPLSPHHS-----------STSKMVVTPVSTAMTTAKWLRTIICP 64
KRK+D + SP KTI SPLSP S + SK+ TPVSTAMTTAKWLRT+I P
Sbjct: 374 KRKYDLMMSPSKTIISPLSPQRSPASHANGIPGSTNSKIAATPVSTAMTTAKWLRTVISP 433
Query: 65 LPSKPSAD-----------------------------------------LQGANLMDNIW 83
LPSKPS + LQ ANLMDNIW
Sbjct: 434 LPSKPSQELERFLTSCDRDITSEVVRRAQIILQAIFPSSPLGDRCVTGSLQSANLMDNIW 493
Query: 84 AEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTV 138
AEQRRLEA+KL Y++L TMC AEAQ+L NLTSL FHRCMLACSAELVLATHKTV
Sbjct: 494 AEQRRLEAMKLYYRLLATMCRAEAQIL-GNNLTSLLTNERFHRCMLACSAELVLATHKTV 552
Query: 139 TMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY 198
TMLF AVLER GITAF+LSKVI+SFIR+EESLPRELRRHLNSLEERLLES+VWEKGSSMY
Sbjct: 553 TMLFPAVLERTGITAFDLSKVIESFIRYEESLPRELRRHLNSLEERLLESLVWEKGSSMY 612
Query: 199 NSLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEPF 258
NSL VARPALSAEIN L EP
Sbjct: 613 NSLAVARPALSAEIN------------------------------------RLSMLAEP- 635
Query: 259 TEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELV 318
MPSLD IAMHINFS GGL PV SL K ET P Q + +
Sbjct: 636 -----------MPSLDEIAMHINFSCGGLPPVPSLPKPETLPA------QNGDMRSPKRL 678
Query: 319 TDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGGGGEPCAETG 373
+ R+VL ERN+FTS VKD LL L+NLKSK LPPPL PT+ NPGGGGE CAETG
Sbjct: 679 CTENRNVLAERNSFTSPVKDRLLHLSNLKSKLLPPPLQSAFASPTKPNPGGGGETCAETG 738
Query: 374 INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILC 433
I++ F KI KL AVRI+ MVERLQLSQQ RE+VY L +R LNQRTSLFFN HIDQIILC
Sbjct: 739 ISVFFSKIVKLGAVRISGMVERLQLSQQTRENVYSLF-QRILNQRTSLFFNRHIDQIILC 797
Query: 434 CFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------------DHVDI 475
CFYGVAKISQLNLTF+EIIYNY KQPQCKPQVFRSVF +H+DI
Sbjct: 798 CFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWSPARRNGGARHRTGQEHIDI 857
Query: 476 ITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA-----------SVFPALPDM 524
I+FYN++F P+VKPLLVELGP G +++++ E N D S FP+LPDM
Sbjct: 858 ISFYNEVFIPSVKPLLVELGPGGATVRSDQVPEANSKTDGHLVQNPGSPRISPFPSLPDM 917
Query: 525 SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSN 583
SPKKVSA H+VYVSPLR+S+MDALISHSSKSYYACVGESTHAY SP KDLT IN+RLNSN
Sbjct: 918 SPKKVSAAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNSN 977
Query: 584 RRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPEQLD 632
R+VRG L FD DVDVGLVSDSMV NSLYLQNGS+A+S+ A LK EQ D
Sbjct: 978 RKVRGPLKFD--DVDVGLVSDSMVANSLYLQNGSSASSSGAPLKSEQPD 1024
>sp|B1ABR6|RBR_HIEPI Retinoblastoma-related protein OS=Hieracium piloselloides GN=RBR
PE=2 SV=1
Length = 1005
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/700 (59%), Positives = 461/700 (65%), Gaps = 152/700 (21%)
Query: 9 AVNITGAKRKFDSLASPVKTITSPLSPHHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSK 68
A+N+TG KRK DS+ SP KTITSPLSP+ S SKM+ TPVSTAMTTAKWLRT++ PL S
Sbjct: 368 AINMTGTKRKIDSMTSPTKTITSPLSPYKSP-SKMISTPVSTAMTTAKWLRTVVSPLSSF 426
Query: 69 PSADL-----------------------------------------QGANLMDNIWAEQR 87
PS DL Q NLMDNIWAEQR
Sbjct: 427 PSVDLTRFLQSCDKDVTSDVIKRARIILEAIFPSSGIPDRTVLSNTQTTNLMDNIWAEQR 486
Query: 88 RLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLF 142
RLEALKL Y+VL MC AE+Q+LH NLTSL FHRCMLACSAELVLATHKTVTMLF
Sbjct: 487 RLEALKLYYRVLHAMCKAESQILHGNNLTSLLTNERFHRCMLACSAELVLATHKTVTMLF 546
Query: 143 LAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLT 202
AVLER GITAF+LSKVI+SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLT
Sbjct: 547 PAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLT 606
Query: 203 VARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEPFTEV 261
+ARP LS EIN LG
Sbjct: 607 IARPNLSNEINRLGL--------------------------------------------- 621
Query: 262 DSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGEL---- 317
L PMPSLDAIA+ N S GGL PV K +TSP S GE+
Sbjct: 622 ----LAGPMPSLDAIALQCNMSCGGLPPVP---KRDTSPGKS-----------GEIRSPK 663
Query: 318 -VTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGGGGEPCAE 371
V ++YRSVLVERN+FTS VKD LLG+ NLKSK L P L PTR +P G E CAE
Sbjct: 664 RVCNEYRSVLVERNSFTSPVKDRLLGIGNLKSKILSPALQSAFASPTRPHPTRG-ETCAE 722
Query: 372 TGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQII 431
T +N+ F KI KLAAVRIN MVER+QL+QQIRE VYCL ++ L QRTSLFFN HIDQII
Sbjct: 723 TAVNLFFSKIVKLAAVRINGMVERMQLTQQIRERVYCLF-QQILGQRTSLFFNRHIDQII 781
Query: 432 LCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DHVDIIT 477
LCCFYGVAKI+QL+LTFKEII+NY KQP CKPQVFR+VF DHVDII
Sbjct: 782 LCCFYGVAKITQLSLTFKEIIFNYRKQPHCKPQVFRAVFVDDRSSSRRGKTGQDHVDIIM 841
Query: 478 FYNKIFAPTVKPLLVELGPVGTAMK-TNRDSEVNHNNDA-----------SVFPALPDMS 525
FYN+IF P+VKPLLVEL P N+ SE N +++ S FP+LPDMS
Sbjct: 842 FYNEIFIPSVKPLLVELAPSNVPKNPNNQVSETNKKDESGPCPCPGSPKVSSFPSLPDMS 901
Query: 526 PKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNR 584
PKKVSA H+VYVSPLR+++MDALISH SKSYYACVGESTHAY SP KDLT IN+RLN R
Sbjct: 902 PKKVSAVHNVYVSPLRSTKMDALISHGSKSYYACVGESTHAYQSPSKDLTAINNRLNGTR 961
Query: 585 RVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCA 624
+VRG+LNFD +VDVGLVSDS+V SLYLQNG AS+
Sbjct: 962 KVRGSLNFD--EVDVGLVSDSLVSQSLYLQNGKGPASSSG 999
>sp|B1ABS0|RBR_HIEPL Retinoblastoma-related protein OS=Hieracium pilosella GN=RBR PE=2
SV=1
Length = 1008
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/692 (59%), Positives = 457/692 (66%), Gaps = 152/692 (21%)
Query: 9 AVNITGAKRKFDSLASPVKTITSPLSPHHSSTSKMVVTPVSTAMTTAKWLRTIICPLPSK 68
A+N+TG KRK DS+ SP KTITSPLSP+ S SKM+ TPVSTAMTTAKWLRT++ PL S
Sbjct: 368 AINMTGTKRKVDSMTSPTKTITSPLSPYKSP-SKMISTPVSTAMTTAKWLRTVVSPLSSF 426
Query: 69 PSADL-----------------------------------------QGANLMDNIWAEQR 87
PS DL Q NLMDNIWAEQR
Sbjct: 427 PSVDLTRFLQSCDKDVTSDVIKRARIILEAIFPSSGIPDRTIISNTQTTNLMDNIWAEQR 486
Query: 88 RLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLF 142
RLEALKL Y+VL MC AE+Q+LH NLTSL FHRCMLACSAELVLATHKTVTMLF
Sbjct: 487 RLEALKLYYRVLHAMCKAESQILHGNNLTSLLTNERFHRCMLACSAELVLATHKTVTMLF 546
Query: 143 LAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLT 202
AVLER GITAF+LSKVI+SFIRHEE LPRELRRHLNSLEERLLESMVWEKGSSMYNSLT
Sbjct: 547 PAVLERTGITAFDLSKVIESFIRHEEPLPRELRRHLNSLEERLLESMVWEKGSSMYNSLT 606
Query: 203 VARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEPFTEV 261
+ARP LS EIN LG
Sbjct: 607 IARPNLSNEINRLGL--------------------------------------------- 621
Query: 262 DSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGEL---- 317
L PMPSLDAIA+ N S GGL PV K +TSP S GE+
Sbjct: 622 ----LADPMPSLDAIALQCNMSCGGLPPVP---KRDTSPGKS-----------GEIRSPK 663
Query: 318 -VTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGGGGEPCAE 371
V ++YRSVLVERN+FTS VKD LLG+NNLKSK L P L PTR +P G E C E
Sbjct: 664 RVCNEYRSVLVERNSFTSPVKDRLLGINNLKSKILSPALQSAFASPTRPHPTRG-ETCGE 722
Query: 372 TGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQII 431
T +N+ F KI KLAAVRIN MVER+QL+QQIRE VYCL ++ L QRTSLFFN HIDQII
Sbjct: 723 TAVNLFFSKIVKLAAVRINGMVERMQLTQQIRERVYCLF-QQILGQRTSLFFNRHIDQII 781
Query: 432 LCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DHVDIIT 477
LCCFYGVAKISQL+LTFKEII+NY KQP CKPQVFR+VF DHVDII
Sbjct: 782 LCCFYGVAKISQLSLTFKEIIFNYRKQPHCKPQVFRAVFVDDRSSSRRSKTGQDHVDIIM 841
Query: 478 FYNKIFAPTVKPLLVELGPVGTAMK-TNRDSEVNHNNDA-----------SVFPALPDMS 525
FYN++F P+VKPLLVEL P N+ S+ N +++ S FP+LPDMS
Sbjct: 842 FYNEVFIPSVKPLLVELAPSNVPKNPNNQVSDSNKKDESGPCPCPGSPKVSSFPSLPDMS 901
Query: 526 PKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNR 584
PKKVSA H+VYVSPLR+++MDALISH SKSYYACVGESTHAY SP KDLT IN+RLN R
Sbjct: 902 PKKVSAVHNVYVSPLRSTKMDALISHGSKSYYACVGESTHAYQSPSKDLTAINNRLNGTR 961
Query: 585 RVRGALNFDDVDVDVGLVSDSMVVNSLYLQNG 616
+VRG+LNFD +VDVGLVSDS+V SLYLQNG
Sbjct: 962 KVRGSLNFD--EVDVGLVSDSLVTQSLYLQNG 991
>sp|Q2ABE5|RBR_CAMSI Retinoblastoma-related protein OS=Camellia sinensis GN=pRB PE=2 SV=1
Length = 1025
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/717 (58%), Positives = 471/717 (65%), Gaps = 146/717 (20%)
Query: 3 GSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHS------------STSKMVVTPVST 50
GSL GGA+NI+GAKRK DS+ASP +TITSPL+P+ S S SKM TPV+T
Sbjct: 367 GSLSGGAMNISGAKRKIDSIASPARTITSPLAPYCSPSASHAKAIPCGSNSKMAATPVTT 426
Query: 51 AMTTAKWLRTIICPLPSKPSADL------------------------------------- 73
AMTTAKWLRTII PLP KPS +L
Sbjct: 427 AMTTAKWLRTIISPLPPKPSPELERFLSSCDSDVTTDVIRRANIILEAIFPSSGLGEECI 486
Query: 74 ----QGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
Q +LMD+IWAEQRRLEALKL Y+VL+ MCTAEAQ+LHA NLTSL FHRCML
Sbjct: 487 TGGLQCTSLMDSIWAEQRRLEALKLYYRVLQAMCTAEAQILHANNLTSLLTNERFHRCML 546
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
ACSAELVLATHKT TMLF AVLER GITAF+LSK+I R +ESLPREL+RHLNSLEER
Sbjct: 547 ACSAELVLATHKTATMLFPAVLERTGITAFDLSKMIGVSFRLKESLPRELKRHLNSLEER 606
Query: 185 LLESMVWEKGSSMYNSLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPT 244
LLESMVWEKGSSMYNSLTVARPALSAE T+ L
Sbjct: 607 LLESMVWEKGSSMYNSLTVARPALSAE-----TNRL------------------------ 637
Query: 245 RQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSI 304
L PMPSLDAIAMH+N + G L + SL K+E I
Sbjct: 638 -------------------CLLAEPMPSLDAIAMHMNITCGSLPCLPSLQKNE------I 672
Query: 305 FNFQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY------PT 358
Q + + +YRSVLVERN+FTS VKD LL N KSK LPPP PT
Sbjct: 673 LLGQNGDIQSPKRLCTEYRSVLVERNSFTSPVKDRLLTFNTPKSK-LPPPALQSAFASPT 731
Query: 359 RSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQR 418
R NPG GGE CAET IN+ F KI KL A RIN MVERLQLSQ+IRE ++ L ++ L+QR
Sbjct: 732 RPNPGAGGETCAETAINVFFSKIVKLGAFRINGMVERLQLSQEIREIIFRLF-QQILSQR 790
Query: 419 TSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-------- 470
T+LFFN HIDQIILCCFYGVAKISQL+LTFKEII PQCKPQVFRSVF
Sbjct: 791 TTLFFNRHIDQIILCCFYGVAKISQLSLTFKEIISTIESNPQCKPQVFRSVFVDWSSARR 850
Query: 471 ------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA--------S 516
+HVDIITFYN+IF P VKPLLVEL PVGTA K NR+SE + D S
Sbjct: 851 HGKTGQEHVDIITFYNEIFIPAVKPLLVELAPVGTAQK-NRNSETINGTDGQCPGSPKIS 909
Query: 517 VFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPF-KDLTD 575
FP+LPDMSPKKVSA H+VYVSPLR+S+MDALIS+ SKSYYACVGESTHAY KDLT
Sbjct: 910 PFPSLPDMSPKKVSAIHNVYVSPLRSSKMDALISNGSKSYYACVGESTHAYQSLSKDLTA 969
Query: 576 INHRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPEQLD 632
IN+RLN NR++RG LNFD +VDVGLVSD++V NSL+LQNGS A+S+ A +K E+LD
Sbjct: 970 INNRLNGNRKLRGTLNFD--EVDVGLVSDTLVANSLWLQNGSCASSSGAPVKSERLD 1024
>sp|Q9LKZ3|RBR1_ARATH Retinoblastoma-related protein 1 OS=Arabidopsis thaliana GN=RBR1
PE=1 SV=1
Length = 1013
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/695 (58%), Positives = 449/695 (64%), Gaps = 149/695 (21%)
Query: 1 SSGSLFGGAVNITGAKRKFDSLASPVKTITSPLSPHHS---------STSKMVVTPVSTA 51
SGSL GAVNITG KRK D+L+SP +T SPLSPH S +K+ TPVSTA
Sbjct: 352 GSGSLSAGAVNITGVKRKIDALSSPARTFISPLSPHKSPAAKTNGISGATKLAATPVSTA 411
Query: 52 MTTAKWLRTIICPLPSKPS----------------------------------------- 70
MTTAKWLRT+I PL KPS
Sbjct: 412 MTTAKWLRTVISPLLPKPSPGLEHFLKSCDRDITNDVTRRAHIILEAIFPNSSLGAQCGG 471
Query: 71 ADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
LQ +LMD+IWAEQRRLEA KL Y+VLE MC AEAQ+LHA NL SL FHRCMLA
Sbjct: 472 GSLQAVDLMDDIWAEQRRLEACKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLA 531
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
CSAELVLATHKT+TMLF AVLER GITAF+LSKVI+SFIRHE+SLPRELRRHLNSLEERL
Sbjct: 532 CSAELVLATHKTITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLEERL 591
Query: 186 LESMVWEKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPT 244
LESMVWEKGSSMYNSL VARP+L+ EIN LG
Sbjct: 592 LESMVWEKGSSMYNSLIVARPSLALEINQLGL---------------------------- 623
Query: 245 RQHYENLPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSI 304
L PMPSLDAIA INFS G + S+ KHET P
Sbjct: 624 ---------------------LAEPMPSLDAIAALINFSDGA-NHASSVQKHETCP---- 657
Query: 305 FNFQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTR 359
Q + + DYRS+LVERN+FTS VKD LL L N+KSK LPPPL PTR
Sbjct: 658 --GQNGGIRSPKRLCTDYRSILVERNSFTSPVKDRLLALGNVKSKMLPPPLQSAFASPTR 715
Query: 360 SNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRT 419
NPGGGGE CAETGINI F KINKLAAVRIN MVERLQLSQQIRESVYC + L QRT
Sbjct: 716 PNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYCFF-QHVLAQRT 774
Query: 420 SLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------- 470
SL F+ HIDQIILCCFYGVAKISQ++LTF+EIIYNY KQPQCKP VFRSV+
Sbjct: 775 SLLFSRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVDALQCRRQ 834
Query: 471 -----DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA--------SV 517
DHVDIITFYN+IF P VKPLLVELGPV + +R E N+ + SV
Sbjct: 835 GRIGPDHVDIITFYNEIFIPAVKPLLVELGPV----RNDRAVEANNKPEGQCPGSPKVSV 890
Query: 518 FPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDI 576
FP++PDMSPKKVSA H+VYVSPLR S+MDALISHS+KSYYACVGESTHAY SP KDL+ I
Sbjct: 891 FPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSTKSYYACVGESTHAYQSPSKDLSAI 950
Query: 577 -NHRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNS 610
N NS+ + LNF D + G+VSDSMV NS
Sbjct: 951 NNRLNNSSSNRKRTLNF---DAEAGMVSDSMVANS 982
>sp|Q9SXN6|RBR1_TOBAC Retinoblastoma-related protein 1 OS=Nicotiana tabacum GN=RB1 PE=2
SV=1
Length = 961
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/679 (58%), Positives = 447/679 (65%), Gaps = 142/679 (20%)
Query: 10 VNITGAKRKFDSLASPVKTITSPLSPHHS---STSKM-VVTPVSTAMTTAKWLRTIICPL 65
VN+ G KRKFD++ASP KT+TS LSP+ S + SKM V TPVSTAMTTA+WLRT+I PL
Sbjct: 364 VNMNGVKRKFDAMASPAKTVTSTLSPYRSPNCANSKMTVATPVSTAMTTARWLRTVIAPL 423
Query: 66 PSKPSADL------------------------------------------QGANLMDNIW 83
KPSA+L Q +LMDNIW
Sbjct: 424 QPKPSAELERFLSSCDRDVTADVIRRAQIILEAIFPSSGPAEHCAAGGSLQSTSLMDNIW 483
Query: 84 AEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTV 138
AEQR EALKL Y+VL+TMCTAE+Q+L+ NLTSL FHRCMLACSAELVLATHKTV
Sbjct: 484 AEQRTSEALKLYYRVLQTMCTAESQILNGNNLTSLLTNERFHRCMLACSAELVLATHKTV 543
Query: 139 TMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY 198
TMLF AVLER GITAF+LSKVI+SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY
Sbjct: 544 TMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY 603
Query: 199 NSLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEPF 258
NSL VA+P+L+AEIN T +L +
Sbjct: 604 NSLAVAKPSLAAEINR--TGLLAE------------------------------------ 625
Query: 259 TEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELV 318
PMPSLDAIAMHIN SSG L P+ SLHK+ +P I + + + V
Sbjct: 626 ----------PMPSLDAIAMHINLSSGSLPPLPSLHKNNLAPNGQIGDIR-----SPKKV 670
Query: 319 TDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGGGGEPCAETG 373
+YRSVLVERN+FTS VKD L LNN+KSK PP L PTR NPGGGGE CAET
Sbjct: 671 CSEYRSVLVERNSFTSPVKDRFLALNNIKSKFPPPALQSAFASPTRPNPGGGGETCAETA 730
Query: 374 INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILC 433
IN+ F KI KLAAVRIN M+ERLQLSQQIRE+VYCL ++ L+QRTSLFFN HIDQIILC
Sbjct: 731 INVFFGKIVKLAAVRINGMIERLQLSQQIRETVYCLF-QKILSQRTSLFFNRHIDQIILC 789
Query: 434 CFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVFDHVDIITFYNKIFAPTVKPLLVE 493
FYGVAK R+ DHVDIITFYN++F P+VKPLLVE
Sbjct: 790 SFYGVAK--------------------------RTGADHVDIITFYNEMFIPSVKPLLVE 823
Query: 494 LGPVGTAMKTNR-DSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHS 552
L P G A K N D + + S FP LPDMSPKKVSA H+VYVSPLR S+MDALISHS
Sbjct: 824 LAPAGNAEKNNHNDGQGPASPKPSPFPKLPDMSPKKVSAVHNVYVSPLRASKMDALISHS 883
Query: 553 SKSYYACVGESTHAY-SPFKDLTDINHRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNSL 611
SKSYYACVGESTHAY SP KDL IN+RLN NR++RGALNF DVD GLVSDS+V NSL
Sbjct: 884 SKSYYACVGESTHAYQSPSKDLDVINNRLNGNRKLRGALNF---DVDAGLVSDSIVANSL 940
Query: 612 YLQNGSAAASTCAVLKPEQ 630
YLQNG+ S A +K EQ
Sbjct: 941 YLQNGN-CRSPVAHVKTEQ 958
>sp|Q8H252|RBR_COCNU Retinoblastoma-related protein OS=Cocos nucifera GN=Rb1 PE=2 SV=1
Length = 1011
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/706 (56%), Positives = 457/706 (64%), Gaps = 156/706 (22%)
Query: 16 KRKFDSLASPVKTITSPLSPHHSSTS--------KMV-VTPVSTAMTTAKWLRTIICPLP 66
KRK+D++ASP K+ITSPLSP S S KMV +TPVSTAMTTAKWLR II PLP
Sbjct: 372 KRKYDAMASPAKSITSPLSPPLSPASPVNGNPVIKMVPITPVSTAMTTAKWLRNIISPLP 431
Query: 67 SKPS-----------------------------------------ADLQGANLMDNIWAE 85
S+PS +LQ N MD+IWAE
Sbjct: 432 SRPSTELLCFFSSCDRDITTDVTRRASIILGAIFPTTSFGDCCISGNLQSVNQMDSIWAE 491
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVTM 140
QR++EA+KL Y+VLETMC AE+ +L+ NLTSL FHRCMLACSAELVLATHKTVTM
Sbjct: 492 QRKVEAMKLYYRVLETMCRAESHILNGNNLTSLLSNDRFHRCMLACSAELVLATHKTVTM 551
Query: 141 LFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNS 200
+F AVLE+ GITAF+LSKVI+SF+RHEE+LPREL+RHLNSLEERLLESM WE+GSSMYNS
Sbjct: 552 MFPAVLEKTGITAFDLSKVIESFVRHEETLPRELKRHLNSLEERLLESMAWERGSSMYNS 611
Query: 201 LTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEPFT 259
L VARP L+AEIN LG
Sbjct: 612 LIVARPTLAAEINRLGL------------------------------------------- 628
Query: 260 EVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELVT 319
L PMPSLDAIA+H N S+GGL P+ KHE S + Q +
Sbjct: 629 ------LAEPMPSLDAIAVHNNISTGGLPPL-PFQKHEHS------SDQNGGAVSPKRAC 675
Query: 320 DDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGGGGEPCAETGI 374
+YRSVLVERN+FTS VK+ L LN LKSK PPL PTR NP GGGE CAETGI
Sbjct: 676 SEYRSVLVERNSFTSPVKELTLTLN-LKSKL--PPLQSAFASPTRPNPAGGGETCAETGI 732
Query: 375 NICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCC 434
NI F KI KLAA+RI ++ ERLQL QQI E VYCL ++ L+QRT+LFFN HIDQIILC
Sbjct: 733 NIFFNKIVKLAAIRIRSLCERLQLPQQILEWVYCLI-QQILSQRTALFFNRHIDQIILCS 791
Query: 435 FYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DHVDIITFYN 480
FYGVAKISQ+ LTFKEIIYNY KQPQCKPQVFRSVF +HVDIITFYN
Sbjct: 792 FYGVAKISQMALTFKEIIYNYRKQPQCKPQVFRSVFVHWPSTSHNGKTGQEHVDIITFYN 851
Query: 481 KIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASV--------FPALPDMSPKKVSAT 532
++F P+VKPLLVELGP G A K+ E ++N D+ + FP LPDMSPKKVSA
Sbjct: 852 EVFIPSVKPLLVELGPAGVAQKSKSSPEDSNNADSQIPGSPRLSPFPNLPDMSPKKVSAA 911
Query: 533 HSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNRRVRGALN 591
H+VYVSPLR+S+MDAL+S SSKSYYACVGESTHAY SP KDLT IN+RLNS R+V G LN
Sbjct: 912 HNVYVSPLRSSKMDALLSPSSKSYYACVGESTHAYQSPSKDLTAINNRLNSGRKVSGRLN 971
Query: 592 FDDVDVDVGLVSDSMVVNSLYLQNGSAA-ASTCAVL----KPEQLD 632
FD +VSDS+V SL QNGS+A A C++L K EQ D
Sbjct: 972 FD-------VVSDSVVAGSLGAQNGSSAPAPACSILELPVKREQPD 1010
>sp|O82677|RBR_CHERU Retinoblastoma-related protein OS=Chenopodium rubrum GN=RB PE=2 SV=1
Length = 1012
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/725 (55%), Positives = 457/725 (63%), Gaps = 170/725 (23%)
Query: 9 AVNITGAKR-KFDSLASPVKTITSPLSPHHSST-----------SKMVVTPVSTAMTTAK 56
A+NI+G + + + L + +TI SPLSP S +M+ TPVSTAMTTAK
Sbjct: 356 AINISGLREIRCNGLFN--ETIASPLSPCRSPALHVNGARGGVNIRMISTPVSTAMTTAK 413
Query: 57 WLRTIICPLPSKPSADLQ-----------------------------------------G 75
WLRT I PLPSKPS L+
Sbjct: 414 WLRTYISPLPSKPSPQLEKYLMSCDRNISSEVVRRAHIIMEAIFPNSALGERCIAGSLPN 473
Query: 76 ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAEL 130
+NL DNIWA+QRRLEALKL Y+VLETMCTAEAQ+LHA NLTSL FHRCMLACSAEL
Sbjct: 474 SNLTDNIWAQQRRLEALKLYYRVLETMCTAEAQLLHANNLTSLLTNERFHRCMLACSAEL 533
Query: 131 VLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMV 190
VLATHKTVTMLF AVLE+ GITAF+LSKVI+SFIRHE+SLPRELRRHLNSLEERLLESM
Sbjct: 534 VLATHKTVTMLFPAVLEKTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLEERLLESMA 593
Query: 191 WEKGSSMYNSLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYEN 250
WEKGSSM NSL +ARPALSA IN F
Sbjct: 594 WEKGSSMDNSLIIARPALSAGIN----------------RFG------------------ 619
Query: 251 LPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFY 310
L PMP L+A+A HI S+GGL P+ S KHE F
Sbjct: 620 --------------LLAEPMPFLNAMAAHIEVSTGGLPPLPSSCKHE-----------FA 654
Query: 311 ANCYGELVT-----DDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRS 360
A G++ + +YRSVLVERN+FTS VKD L+ NNLK K PP L PTR
Sbjct: 655 AGQNGDIRSPKRACTEYRSVLVERNSFTSPVKDRLI--NNLKQKLTPPALQSAFASPTRL 712
Query: 361 NPGGGGEPCAETGINICFCKINKLAAVRINAMVERL----------QLSQQIRESVYCLC 410
+PGGGGE CAETGINI F KI KLAAVRIN M+ERL QL +Q+RE+VYC
Sbjct: 713 SPGGGGETCAETGINIFFSKIVKLAAVRINGMIERLEKLEKQSQTQQLREQLRENVYCRF 772
Query: 411 PKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
LNQRTSLFFN HIDQIILC FYGVAKISQ LTFKEII NY KQPQCKPQVFRSVF
Sbjct: 773 -HIILNQRTSLFFNRHIDQIILCAFYGVAKISQYELTFKEIILNYRKQPQCKPQVFRSVF 831
Query: 471 -------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA-- 515
DHVDIITFYN++F P+VKPLL ELGP G +KT+ E N++ D
Sbjct: 832 VDWSFSRRNRQGQDHVDIITFYNEVFIPSVKPLLGELGPQGACVKTDLIPESNNDKDGQC 891
Query: 516 ------SVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-S 568
S FP+LPDMSPKKV+ +VYVSPLR+S+MDALIS+SSKSYYACVGESTHA+ S
Sbjct: 892 PGSPKLSTFPSLPDMSPKKVA--KNVYVSPLRSSKMDALISNSSKSYYACVGESTHAFQS 949
Query: 569 PFKDLTDINHRLNSNRRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGS-AAASTCAVLK 627
P KDLT IN RLNS +VRGALNF D D GLVSDS+V NSLYLQNG+ A S+ LK
Sbjct: 950 PSKDLTAINDRLNSTSKVRGALNF---DTDAGLVSDSLVANSLYLQNGNCATTSSVGPLK 1006
Query: 628 PEQLD 632
EQ D
Sbjct: 1007 TEQPD 1011
>sp|A9UL13|RBR1_WHEAT Retinoblastoma-related protein 1 OS=Triticum aestivum GN=RBR1 PE=2
SV=1
Length = 957
Score = 600 bits (1546), Expect = e-170, Method: Compositional matrix adjust.
Identities = 370/715 (51%), Positives = 435/715 (60%), Gaps = 170/715 (23%)
Query: 11 NITGAKRKFDS-LASPVKTITS--PLSP---------HHSSTSKMV-VTPVSTAMTTAKW 57
+ G KRK+D +ASP K+ S P+SP + SKM TPVSTAMTTAKW
Sbjct: 321 KLPGTKRKYDDVMASPTKSTASRAPMSPPRFCPSPNGNSFCNSKMAPFTPVSTAMTTAKW 380
Query: 58 LRTIICPLPSKPSADL----------------------------------------QGAN 77
LR+ I PLPSKPS +L + +
Sbjct: 381 LRSTISPLPSKPSGELLRFFSACDKDVTDDITCRAAIILGAIFTGSSFGERMCTSLRNTS 440
Query: 78 LMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVL 132
MD IW EQR++EALKL Y+VLE+MC AE+Q+L NLTSL FHRCM+ACSAELVL
Sbjct: 441 GMDAIWTEQRKMEALKLYYRVLESMCRAESQILSGSNLTSLLSNERFHRCMIACSAELVL 500
Query: 133 ATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWE 192
ATHKTVTM+F AVLE+ GITAF+LSKVI+SF+RHE+SLPREL+RHLNSLEERLLESM WE
Sbjct: 501 ATHKTVTMMFPAVLEKTGITAFDLSKVIESFVRHEDSLPRELKRHLNSLEERLLESMAWE 560
Query: 193 KGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENL 251
KGSSMYNSL VARP LSAEIN LG
Sbjct: 561 KGSSMYNSLIVARPTLSAEINRLGL----------------------------------- 585
Query: 252 PWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYA 311
L PMPSLDAIA+H + S GGL P+ + + V S
Sbjct: 586 --------------LAEPMPSLDAIAVHHDISLGGLPPLPFHKQPDKDEVRS-------- 623
Query: 312 NCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPP----LYPTRSNPGGGGE 367
+ + R+VLV+ N+F S VKD + KSK LPP PTR NP GGE
Sbjct: 624 ---PKRACTERRNVLVD-NSFRSPVKDAI------KSKFLPPLQSAFASPTRPNPAAGGE 673
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
CAETGI + KI KLAA+RI + ERLQLSQQI E VY L ++ ++Q+T+LFFN HI
Sbjct: 674 TCAETGIGVFLSKITKLAAIRIKCLCERLQLSQQILERVYSLV-QQIISQQTALFFNRHI 732
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DHV 473
DQIILCC YGVAKISQL LTFKEII++Y KQ QCKPQVFRSV+ DHV
Sbjct: 733 DQIILCCIYGVAKISQLALTFKEIIFSYRKQSQCKPQVFRSVYVNWPSRSRSGKIGEDHV 792
Query: 474 DIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA---------SVFPALPDM 524
DIITFYN++F PTVKPLLV+LGP GT+ NR++E DA S FP LPDM
Sbjct: 793 DIITFYNEVFIPTVKPLLVDLGP-GTS--PNRNNEPKSGGDAASFPESPRLSRFPNLPDM 849
Query: 525 SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSN 583
SPKKVSATH+VYVSPLR+S+MD L+S SSKSYYACVGESTHA+ SP KDL IN RLNS
Sbjct: 850 SPKKVSATHNVYVSPLRSSKMDTLLSPSSKSYYACVGESTHAFQSPSKDLNAINTRLNSG 909
Query: 584 RRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAAS-----TCAVLKPEQLDP 633
++V G LNFD +VSD +V SL QNGS+AA+ T +K EQ DP
Sbjct: 910 KKVNGRLNFD-------VVSDLVVARSLSDQNGSSAAAMAVFGTKTPVKGEQQDP 957
>sp|Q84QM3|RBR1_ORYSJ Retinoblastoma-related protein 1 OS=Oryza sativa subsp. japonica
GN=RBR1 PE=2 SV=1
Length = 1010
Score = 596 bits (1536), Expect = e-169, Method: Compositional matrix adjust.
Identities = 362/689 (52%), Positives = 418/689 (60%), Gaps = 154/689 (22%)
Query: 9 AVNITGAKRKFDSLASPVKTITSP--LSP---------HHSSTSKMV-VTPVSTAMTTAK 56
A+N+ G KRK+D +ASP K+ITSP +SP + +SKM +TPVSTAMTTAK
Sbjct: 370 AINLPGTKRKYDVMASPAKSITSPSPMSPPRFCASPTGNGYCSSKMAPITPVSTAMTTAK 429
Query: 57 WLRTIICPLPSKPSADL----------------------------------------QGA 76
WLR+ I PLPSKPS +L +
Sbjct: 430 WLRSTISPLPSKPSGELLRFFSACDKDVTDDITRRAGIILGAIFTSSSFGERICTSVRST 489
Query: 77 NLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELV 131
N +D IW EQR++EALKL Y+VLE+MC AE Q+L NLTSL FHRCM+ACSAELV
Sbjct: 490 NRIDAIWTEQRKMEALKLYYRVLESMCRAETQILSGNNLTSLLSNERFHRCMIACSAELV 549
Query: 132 LATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
LATHKTVTM+F AVLE+ GITAF+LSKVI+SF+RHE++LPREL+RHLNSLEERLLESM W
Sbjct: 550 LATHKTVTMMFPAVLEKTGITAFDLSKVIESFVRHEDTLPRELKRHLNSLEERLLESMAW 609
Query: 192 EKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYEN 250
EKGSSMYNSL VARP LSAEIN LG
Sbjct: 610 EKGSSMYNSLIVARPTLSAEINRLGL---------------------------------- 635
Query: 251 LPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFY 310
L PMPSLDAIA H N S GL P+ K E SP
Sbjct: 636 ---------------LAEPMPSLDAIAAHHNISLEGLPPL-PFQKQEHSPDKDEVRSPKR 679
Query: 311 ANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPP----LYPTRSNPGGGG 366
A + R+VLV+ N+F S VKD LKSK LPP L PTR NP GG
Sbjct: 680 A-------CTERRNVLVDNNSFRSPVKD------TLKSK-LPPLQSAFLSPTRPNPAAGG 725
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
E CAETGI + KI KLAA+RI + ERLQLSQQ+ E VY L ++ + Q+T+LFFN H
Sbjct: 726 ELCAETGIGVFLSKIAKLAAIRIRGLCERLQLSQQVLERVYSLV-QQIIIQQTALFFNRH 784
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DH 472
IDQIILC YGVAKISQL LTFKEII+ Y KQ QCKPQVFRSV+ DH
Sbjct: 785 IDQIILCSIYGVAKISQLALTFKEIIFGYRKQSQCKPQVFRSVYVHWASRSRNGKTGEDH 844
Query: 473 VDIITFYNKIFAPTVKPLLVELGPVGTAMKTNR-----DSEVNHNNDASVFPALPDMSPK 527
VDIITFYN++F PTVKPLLVELG + K N D + S FP LPDMSPK
Sbjct: 845 VDIITFYNEVFIPTVKPLLVELGSGTSPNKKNEEKCAADGPYPESPRLSRFPNLPDMSPK 904
Query: 528 KVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNRRV 586
KVSA H+VYVSPLRTS+MD L+S SSKSYYACVGESTHA+ SP KDL IN+RLNS ++V
Sbjct: 905 KVSAAHNVYVSPLRTSKMDTLLSPSSKSYYACVGESTHAFQSPSKDLKVINNRLNSGKKV 964
Query: 587 RGALNFDDVDVDVGLVSDSMVVNSLYLQN 615
G LNFD +VSD +V SL QN
Sbjct: 965 SGRLNFD-------VVSDLVVARSLSDQN 986
>sp|A2YXJ7|RBR1_ORYSI Retinoblastoma-related protein 1 OS=Oryza sativa subsp. indica
GN=RBR1 PE=3 SV=1
Length = 1010
Score = 596 bits (1536), Expect = e-169, Method: Compositional matrix adjust.
Identities = 362/689 (52%), Positives = 418/689 (60%), Gaps = 154/689 (22%)
Query: 9 AVNITGAKRKFDSLASPVKTITSP--LSP---------HHSSTSKMV-VTPVSTAMTTAK 56
A+N+ G KRK+D +ASP K+ITSP +SP + +SKM +TPVSTAMTTAK
Sbjct: 370 AINLPGTKRKYDVMASPAKSITSPSPMSPPRFCASPTGNGYCSSKMAPITPVSTAMTTAK 429
Query: 57 WLRTIICPLPSKPSADL----------------------------------------QGA 76
WLR+ I PLPSKPS +L +
Sbjct: 430 WLRSTISPLPSKPSGELLRFFSACDKDVTDDITRRAGIILGAIFTSSSFGERICTSVRST 489
Query: 77 NLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELV 131
N +D IW EQR++EALKL Y+VLE+MC AE Q+L NLTSL FHRCM+ACSAELV
Sbjct: 490 NRIDAIWTEQRKMEALKLYYRVLESMCRAETQILSGNNLTSLLSNERFHRCMIACSAELV 549
Query: 132 LATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
LATHKTVTM+F AVLE+ GITAF+LSKVI+SF+RHE++LPREL+RHLNSLEERLLESM W
Sbjct: 550 LATHKTVTMMFPAVLEKTGITAFDLSKVIESFVRHEDTLPRELKRHLNSLEERLLESMAW 609
Query: 192 EKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYEN 250
EKGSSMYNSL VARP LSAEIN LG
Sbjct: 610 EKGSSMYNSLIVARPTLSAEINRLGL---------------------------------- 635
Query: 251 LPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFY 310
L PMPSLDAIA H N S GL P+ K E SP
Sbjct: 636 ---------------LAEPMPSLDAIAAHHNISLEGLPPL-PFQKQEHSPDKDEVRSPKR 679
Query: 311 ANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPP----LYPTRSNPGGGG 366
A + R+VLV+ N+F S VKD LKSK LPP L PTR NP GG
Sbjct: 680 A-------CTERRNVLVDNNSFRSPVKD------TLKSK-LPPLQSAFLSPTRPNPAAGG 725
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
E CAETGI + KI KLAA+RI + ERLQLSQQ+ E VY L ++ + Q+T+LFFN H
Sbjct: 726 ELCAETGIGVFLSKIAKLAAIRIRGLCERLQLSQQVLERVYSLV-QQIIIQQTALFFNRH 784
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF--------------DH 472
IDQIILC YGVAKISQL LTFKEII+ Y KQ QCKPQVFRSV+ DH
Sbjct: 785 IDQIILCSIYGVAKISQLALTFKEIIFGYRKQSQCKPQVFRSVYVHWASRSRNGKTGEDH 844
Query: 473 VDIITFYNKIFAPTVKPLLVELGPVGTAMKTNR-----DSEVNHNNDASVFPALPDMSPK 527
VDIITFYN++F PTVKPLLVELG + K N D + S FP LPDMSPK
Sbjct: 845 VDIITFYNEVFIPTVKPLLVELGSGTSPNKKNEEKCAADGPYPESPRLSRFPNLPDMSPK 904
Query: 528 KVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSNRRV 586
KVSA H+VYVSPLRTS+MD L+S SSKSYYACVGESTHA+ SP KDL IN+RLNS ++V
Sbjct: 905 KVSAAHNVYVSPLRTSKMDTLLSPSSKSYYACVGESTHAFQSPSKDLKVINNRLNSGKKV 964
Query: 587 RGALNFDDVDVDVGLVSDSMVVNSLYLQN 615
G LNFD +VSD +V SL QN
Sbjct: 965 SGRLNFD-------VVSDLVVARSLSDQN 986
>sp|Q3LXA7|RBR3_MAIZE Retinoblastoma-related protein 3 OS=Zea mays GN=RBR3 PE=2 SV=1
Length = 1010
Score = 583 bits (1503), Expect = e-165, Method: Compositional matrix adjust.
Identities = 352/715 (49%), Positives = 424/715 (59%), Gaps = 164/715 (22%)
Query: 9 AVNITGAKRKFDSLASPVKTITSP---------LSPHHSS--TSKMV-VTPVSTAMTTAK 56
A+N+ G KRK+D +ASP K+I+SP LSP + SKM TPVSTAMTTAK
Sbjct: 367 AINLPGTKRKYDVMASPAKSISSPNPMSPPRFCLSPKGNGFCNSKMAPSTPVSTAMTTAK 426
Query: 57 WLRTIICPLPSKPSADL----------------------------------------QGA 76
WLR + PLPS+PS +L + A
Sbjct: 427 WLRNTVSPLPSRPSGELLRFFSACDKDLTDDIAHRAGIILGAIFTSSSFGERICTSMRSA 486
Query: 77 NLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELV 131
+ MD IW EQR++EALKL Y+VLE+MC AE+Q+L NLTSL FHRCM+ACSAELV
Sbjct: 487 SRMDAIWTEQRKMEALKLYYRVLESMCRAESQILSGNNLTSLLSNERFHRCMIACSAELV 546
Query: 132 LATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
LATHKTVTM+F AVLE+ GITAF+LSKVI+ F+RHE++LPREL+RHLNSLEERLLESM W
Sbjct: 547 LATHKTVTMMFPAVLEKTGITAFDLSKVIEGFVRHEDTLPRELKRHLNSLEERLLESMAW 606
Query: 192 EKGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYEN 250
EKGSSMYNSL VARPALS EI+ LG
Sbjct: 607 EKGSSMYNSLIVARPALSVEISRLGL---------------------------------- 632
Query: 251 LPWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFY 310
L PMPSLDAIA H N S GGL P+ K E Q
Sbjct: 633 ---------------LAEPMPSLDAIAAHHNISLGGLPPL-PFQKQE--------RLQDK 668
Query: 311 ANCYG-ELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLY-----PTRSNPGG 364
+ + R+VLV+ N+ S VKD + KP PPL PTR NP
Sbjct: 669 DEVRSPKRACTERRNVLVDSNSLRSPVKDII--------KPKLPPLQSAFASPTRPNPAA 720
Query: 365 GGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFN 424
GGE CAETGI + F KI+KLAA+RI ++ ERLQL QQ+ E VY L ++ L+Q+T LFFN
Sbjct: 721 GGETCAETGIGVFFSKISKLAAIRIRSLCERLQLPQQVLERVYSLV-QQILSQQTGLFFN 779
Query: 425 CHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF-------------- 470
HIDQIILC YGVAKISQL L+FKEII+ Y KQPQCKPQVFRSV+
Sbjct: 780 RHIDQIILCSIYGVAKISQLELSFKEIIFGYRKQPQCKPQVFRSVYVHWPPRSRNGKTGE 839
Query: 471 DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVN--------HNNDASVFPALP 522
DHVDIITFYN++F P VK LLVE+GP +A ++ E + + FP LP
Sbjct: 840 DHVDIITFYNEVFIPAVKSLLVEVGPGASASPKKKEEEKGPADVGPFPESPRLARFPNLP 899
Query: 523 DMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLN 581
DMSPKKVSATH+VYVSPLR+S+MD L+S SSKSYYACVGEST+A+ SP KDL IN+RLN
Sbjct: 900 DMSPKKVSATHNVYVSPLRSSKMDTLLSPSSKSYYACVGESTYAFQSPSKDLKAINNRLN 959
Query: 582 S---NRRVRGALNFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKPEQLDP 633
S ++V G LNFD +VSD +V +SL + A+ A P + +P
Sbjct: 960 SVSGGKKVSGRLNFD-------VVSDLVVASSLGSDRDAKPAADPAKTTPVKCEP 1007
>sp|Q2R374|RBR2_ORYSJ Retinoblastoma-related protein 2 OS=Oryza sativa subsp. japonica
GN=RBR2 PE=2 SV=2
Length = 978
Score = 509 bits (1310), Expect = e-143, Method: Compositional matrix adjust.
Identities = 316/695 (45%), Positives = 404/695 (58%), Gaps = 143/695 (20%)
Query: 7 GGAVNITGAKRKFDSLASPVKTITSPLSP--------HHSSTSKMVVTPVSTAMTTAKWL 58
G + N +KR F++LASP KTI + L+ + S + +TPV++AMTTAKWL
Sbjct: 338 GSSANFGCSKRVFETLASPTKTIKNMLAAPSSPSSPANGGSIKIVQMTPVTSAMTTAKWL 397
Query: 59 RTIICPLPSKPSADLQG----------------------------------------ANL 78
R +I LP KPS+ L+ AN
Sbjct: 398 RDVISSLPDKPSSKLEEFLSSCDTDLTSDVVKRVSIILEAIFPTKSIDRGTSIGLNCANA 457
Query: 79 MDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLA 133
D WAE R++EA KL Y+VLE +C AE+Q + NLT L FHRC++ACSAELVLA
Sbjct: 458 FDIPWAEARKMEASKLYYRVLEAICRAESQNNNVNNLTPLLSNERFHRCLIACSAELVLA 517
Query: 134 THKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEK 193
THKTV M+F AVLE G+TAF+LSK+I++F+RHEE+LPREL+RHLNSLEE+LLESM WEK
Sbjct: 518 THKTVIMMFPAVLESTGLTAFDLSKIIENFVRHEETLPRELKRHLNSLEEQLLESMSWEK 577
Query: 194 GSSMYNSLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPW 253
GSS+YNSL VARP+LS
Sbjct: 578 GSSLYNSLVVARPSLS-------------------------------------------- 593
Query: 254 WKEPFTEVDSIFLLI-PMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYAN 312
TE++S+ LL PMPSLD I + GL P S P N
Sbjct: 594 -----TEINSLGLLAEPMPSLDGIVARQSIHPDGLPPTPSKRWPSAGP---------DGN 639
Query: 313 CYGE---LVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSK--PLPPPLY-PTRSNPGGGG 366
CY + + + R+ LVERN+ T K GL+ LK+K PL PT SNP G
Sbjct: 640 CYPQSPKRLCTESRNSLVERNSQTPPPKQSQTGLSILKAKYHPLQATFASPTVSNPVSGN 699
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
E CA G+ I F KI KLAA+RI + ERL+ +++ SVY + K+ L+Q+T+LFFN H
Sbjct: 700 EKCAVVGVQIFFSKILKLAAIRIRNLCERLR-HEELTVSVYNIF-KQILDQQTALFFNRH 757
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------DHVD 474
+DQIILCC YGVAK+SQL+LTFKEI+ NY ++PQCKP+VFRS+F HVD
Sbjct: 758 VDQIILCCLYGVAKVSQLSLTFKEIVNNYKREPQCKPEVFRSIFVGSTNRNGGFGSRHVD 817
Query: 475 IITFYNKIFAPTVKPLLVELGPVGT--AMKTNRDSEVNHNNDASVFPALPDMSPKKVSAT 532
II FYN++F PTVKPLLV L P T K N +S++ + +S F LPDMSPKKVS++
Sbjct: 818 IIVFYNQVFVPTVKPLLVALMPSSTRPEDKRNTNSQIPGSPKSSPFSNLPDMSPKKVSSS 877
Query: 533 HSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLN-SNRRVRGAL 590
H+VYVSPLR ++MDAL+S SS+S+YAC+GEST A+ SP KDL IN RLN RR+ +
Sbjct: 878 HNVYVSPLRQTKMDALLSPSSRSFYACIGESTQAFQSPSKDLAAINSRLNYPTRRINTRI 937
Query: 591 NFDDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAV 625
NFD +VSDS+V SL NG +A+S A
Sbjct: 938 NFD-------MVSDSVVAGSLGQPNGGSASSDPAA 965
>sp|Q9LKX9|RBR1_MAIZE Retinoblastoma-related protein 1 OS=Zea mays GN=RBR1 PE=1 SV=2
Length = 867
Score = 485 bits (1249), Expect = e-136, Method: Compositional matrix adjust.
Identities = 308/696 (44%), Positives = 392/696 (56%), Gaps = 139/696 (19%)
Query: 7 GGAVNITGAKRKFDSLASPVKTI-------TSPLSPHHSSTSKMV-VTPVSTAMTTAKWL 58
G + N+ +K F++LASP KTI +SPLSP + K+V +TPV++AMTTAKWL
Sbjct: 228 GDSTNLGHSKCAFETLASPTKTIKNMLTVPSSPLSPATGGSVKIVQMTPVTSAMTTAKWL 287
Query: 59 RTIICPLPSKPSADLQG-----------------------------------------AN 77
R +I LP KPS+ LQ AN
Sbjct: 288 REVISSLPDKPSSKLQQFLSSCDRDLTNAVTERVSIVLEAIFPTKSSANRGVSLGLNCAN 347
Query: 78 LMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVL 132
D WAE R++EA KL Y+VLE +C AE Q + NLT L FHRC++ACSA+LVL
Sbjct: 348 AFDIPWAEARKVEASKLYYRVLEAICRAELQNSNVNNLTPLLSNERFHRCLIACSADLVL 407
Query: 133 ATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWE 192
ATHKTV M+F AVLE G+TAF+LSK+I++F+RHEE+LPREL+RHLNSLEE+LLESM WE
Sbjct: 408 ATHKTVIMMFPAVLESTGLTAFDLSKIIENFVRHEETLPRELKRHLNSLEEQLLESMAWE 467
Query: 193 KGSSMYNSLTVARPALSAEIN-LGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENL 251
KGSS+YNSL VARP++++EIN LG
Sbjct: 468 KGSSLYNSLIVARPSVASEINRLGL----------------------------------- 492
Query: 252 PWWKEPFTEVDSIFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYA 311
L PMPSLD + N GL P K P +
Sbjct: 493 --------------LAEPMPSLDDLVSRQNVRIEGL-PATPSKKRAAGPDDNADPRSPKR 537
Query: 312 NCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSK--PLPPPLY-PTRSNPGGGGEP 368
+C ++ R+ +VERN T K + +LK+K PL PT NP GG E
Sbjct: 538 SC------NESRNTVVERNLQTPPPKQSHMVSTSLKAKCHPLQSTFASPTVCNPVGGNEK 591
Query: 369 CAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHID 428
CA+ I+I F KI KLAA+RI + ER+Q +Q E VY + K+ L Q+T+LFFN HID
Sbjct: 592 CADVTIHIFFSKILKLAAIRIRNLCERVQCVEQT-ERVYNVF-KQILEQQTTLFFNRHID 649
Query: 429 QIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------DHVDII 476
Q+ILCC YGVAK+ QL LTF+EI+ NY ++ QCKP+VF S++ HV II
Sbjct: 650 QLILCCLYGVAKVCQLELTFREILNNYKREAQCKPEVFSSIYIGSTNRNGVLVSRHVGII 709
Query: 477 TFYNKIFAPTVKPLLVELGPVGT--AMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHS 534
TFYN++F P KP LV L GT K N ++ + S FP LPDMSPKKVSA+H+
Sbjct: 710 TFYNEVFVPAAKPFLVSLISSGTHPEDKKNASGQIPGSPKPSPFPNLPDMSPKKVSASHN 769
Query: 535 VYVSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSN-RRVRGALNF 592
VYVSPLR +++D L+S SS+S+YAC+GE THAY SP KDL IN RLN N R+V LNF
Sbjct: 770 VYVSPLRQTKLDLLLSPSSRSFYACIGEGTHAYQSPSKDLAAINSRLNYNGRKVNSRLNF 829
Query: 593 DDVDVDVGLVSDSMVVNSLYLQNGSAAASTCAVLKP 628
D +VSDS+V SL NG + + A P
Sbjct: 830 D-------MVSDSVVAGSLGQINGGSTSDPAAAFSP 858
>sp|Q8H0J6|RBR2_MAIZE Retinoblastoma-related protein 2 OS=Zea mays GN=RBR2 PE=2 SV=1
Length = 866
Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 292/686 (42%), Positives = 381/686 (55%), Gaps = 139/686 (20%)
Query: 9 AVNITGAKRKFDSLASPVKTI-------TSPLSPHHSSTSKMV-VTPVSTAMTTAKWLRT 60
+ N+ +K F++LASP KTI +SPLSP + + K+V +TP+++AMTTAKWLR
Sbjct: 229 STNLGCSKCAFETLASPRKTIKNMLTVPSSPLSPTNGCSVKIVQMTPITSAMTTAKWLRE 288
Query: 61 IICPLPSKPSADLQG-----------------------------------------ANLM 79
+I LP KPS+ LQ AN
Sbjct: 289 VISSLPEKPSSKLQQLMSSCDRDLTYAVTERVSIVLEAIFPTKSSADRGGSLGLNCANAF 348
Query: 80 DNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLAT 134
D +WA+ R++EA KL Y+VLE +C AE Q + NLT L FHRC++ACSA++VLAT
Sbjct: 349 DTLWADARKMEASKLYYRVLEAICRAELQNSNVNNLTPLLSNERFHRCLIACSADVVLAT 408
Query: 135 HKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVWEKG 194
HKTV M+F AVLE G+T+F+LSK+I++F+RHEE+LPREL+RHLNSLEE++LESM
Sbjct: 409 HKTVIMMFPAVLESAGLTSFDLSKIIENFVRHEETLPRELKRHLNSLEEQILESM----- 463
Query: 195 SSMYNSLTVARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWW 254
+WE+ +S+ P+
Sbjct: 464 --------------------------------AWEKGSSLYNSLIVARPSVA-------- 483
Query: 255 KEPFTEVDSIFLLIP-MPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANC 313
+E++ LL MPSLD + N GL P K + C
Sbjct: 484 ----SEINRFGLLAESMPSLDDLVARQNIHIEGL-PATPSKKRAAGRDDNADPRSPKRPC 538
Query: 314 YGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSK--PLPPPLY-PTRSNPGGGGEPCA 370
++ RS +VE N T K C + L +LK+K PL PT SNP GG E CA
Sbjct: 539 ------NESRSPVVEHNLQTPPPKQCHMVLTSLKAKCHPLQSTFASPTVSNPVGGNEKCA 592
Query: 371 ETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQI 430
+ I I F KI KLAA+RI + ER+Q +Q E VY + K+ L+Q+T+LFFN HIDQ+
Sbjct: 593 DVTIQIFFSKILKLAAIRIRNLCERIQYMEQT-ERVYNVF-KQILDQQTTLFFNRHIDQL 650
Query: 431 ILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------DHVDIITF 478
ILCC YGVAK+ QL L+F+EI+ NY K+ QCKP+VF S++ HVDIITF
Sbjct: 651 ILCCLYGVAKVCQLELSFREILNNYKKEAQCKPEVFLSIYIGSRNHNGVLISRHVDIITF 710
Query: 479 YNKIFAPTVKPLLVELGPVGT--AMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVY 536
YN++F P KP LV L GT K N +V + S FP LPDMSPKKVSA+H+VY
Sbjct: 711 YNEVFVPAAKPFLVSLISSGTRPEDKKNASGQVPGSPKLSPFPNLPDMSPKKVSASHNVY 770
Query: 537 VSPLRTSEMDALISHSSKSYYACVGESTHAY-SPFKDLTDINHRLNSN-RRVRGALNFDD 594
VSPLR ++MD L+S SS+S+YAC+GE THAY SP KDL IN RLN N RRV LNFD
Sbjct: 771 VSPLRQTKMDLLLSPSSRSFYACIGEGTHAYQSPSKDLAAINSRLNYNGRRVNSRLNFD- 829
Query: 595 VDVDVGLVSDSMVVNSLYLQNGSAAA 620
+VSDS+V SL NG + +
Sbjct: 830 ------MVSDSVVAGSLGQPNGGSTS 849
>sp|A9SVH7|RBR_PHYPA Retinoblastoma-related protein OS=Physcomitrella patens subsp.
patens GN=RBR PE=3 SV=1
Length = 1116
Score = 233 bits (595), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 135/264 (51%), Positives = 161/264 (60%), Gaps = 62/264 (23%)
Query: 11 NITGAKRKFDSLASPVK-------------------TITSPLSPHHSSTSKMV-VTPVST 50
N+ +RKFD +ASPV+ + + SS K TPV+
Sbjct: 485 NVPVYQRKFDIMASPVRFGAFSMGAAPSSPAASPWSSPVKHMGTQGSSGGKRPPSTPVTI 544
Query: 51 AMTTAKWLRTIICPLPSKPSADLQ------------------------------------ 74
MTTAKWLRT+I PL ++PS +LQ
Sbjct: 545 TMTTAKWLRTVITPLAAEPSVELQLFFRSCDRDISADVKNRAHVLLDLIFSAERGGGWQG 604
Query: 75 GANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
A LMD +W EQR+LEA+KL YKVL MC +E Q LH NLTSL FHRCM+ACSAE
Sbjct: 605 VAGLMD-VWPEQRKLEAIKLYYKVLGAMCRSEEQRLHTHNLTSLLSNERFHRCMIACSAE 663
Query: 130 LVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESM 189
LVLATHKTVTM F AVLE GITAF+LSKVI+ F+RHEE+LPREL+RHLN++EER+LESM
Sbjct: 664 LVLATHKTVTMGFPAVLEPAGITAFDLSKVIEYFVRHEETLPRELKRHLNTIEERILESM 723
Query: 190 VWEKGSSMYNSLTVARPALSAEIN 213
WEKGSSMYNSL VARP+L+ EIN
Sbjct: 724 AWEKGSSMYNSLIVARPSLANEIN 747
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/264 (39%), Positives = 146/264 (55%), Gaps = 32/264 (12%)
Query: 357 PTRSNPGGGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLN 416
P R +P GGGE CA+T IN+ F K LAAVRI + ER+ Q + E VY + + L+
Sbjct: 845 PQRPSPLGGGETCADTVINVFFQKALVLAAVRIRTVCERIGQPQHLIERVYKVF-QHALH 903
Query: 417 QRTSLFFNCHIDQIILCCFYGVAKISQLNLT-FKEIIYNYGKQPQCKPQV-FRSV--FDH 472
TSLFFN HIDQ++LC YGV K +++ F+ ++ + + F+ +
Sbjct: 904 HETSLFFNRHIDQLVLCTIYGVCKKPSYSVSGFRSYRHSCDMAMRMTLWINFQKTGGLES 963
Query: 473 VDIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNND------------------ 514
DII FYN +F K LV++ ++M++ R + + ND
Sbjct: 964 GDIIKFYNDVFVHVTKKFLVQVD-TNSSMRSPRKAHGSDGNDGTISKLLKDEMEVIIIKG 1022
Query: 515 -------ASVFPALPDMSPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAY 567
AS+F PD+SPKKVSA H+V+VSPLR+S++D L+S +++ YACVGEST Y
Sbjct: 1023 EAPGSPVASIFSTFPDISPKKVSALHNVFVSPLRSSKVDKLMSPRTRTLYACVGESTRDY 1082
Query: 568 -SPFKDLTDINHRLNSNRRVRGAL 590
SP KDLT IN+RLN G L
Sbjct: 1083 QSPSKDLTAINNRLNKRFIAHGDL 1106
>sp|P28749|RBL1_HUMAN Retinoblastoma-like protein 1 OS=Homo sapiens GN=RBL1 PE=1 SV=3
Length = 1068
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 26/221 (11%)
Query: 6 FGGAVNITGAK--RKFDSLASPVKTITSPLSPHHSSTSKM---------------VVTPV 48
F + +TG + R+ +++ +PV + T +S S + + V PV
Sbjct: 365 FAPSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSDQLINIFESCVRNPV 424
Query: 49 STAMTTAKWLRTIICPLPSKPSADLQGANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQ 108
M K + C ++ S D Q + +D +A R A L YK+LET+ E +
Sbjct: 425 ENIMKILKGIGETFCQHYTQ-STDEQPGSHID--FAVNRLKLAEILYYKILETVMVQETR 481
Query: 109 VLHAKNLTSL-----FHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSF 163
LH +++ L FHR ++AC E+VL + + F ++E + + F KVI+
Sbjct: 482 RLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVV 540
Query: 164 IRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 204
IR EE L R++ +HLNS+EE++LES+ W S+++ +L V+
Sbjct: 541 IRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQVS 581
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 67/269 (24%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 778 GINRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 836
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------- 470
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 837 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVAYNK 896
Query: 471 -----------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAM 501
+ D+I FYN I+ VK A+
Sbjct: 897 NINDDFEMIDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSF---------AL 947
Query: 502 KTNRDSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSY 556
K + ++ +H DA S FP + SP+++S HS+Y+SP + + ++ S
Sbjct: 948 KYDLANQ-DHMMDAPPLSPFPHIKQQPGSPRRISQQHSIYISPHKNG---SGLTPRSALL 1003
Query: 557 YACVGESTHAYSPFKDLTDINHRLNSNRR 585
Y G SP K L DIN+ + +
Sbjct: 1004 YKFNG------SPSKSLKDINNMIRQGEQ 1026
>sp|Q64701|RBL1_MOUSE Retinoblastoma-like protein 1 OS=Mus musculus GN=Rbl1 PE=1 SV=3
Length = 1063
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 40/197 (20%)
Query: 44 VVTPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------- 82
V TPV++A + L++I+ L S PS L N M NI
Sbjct: 383 VTTPVASATQSVSRLQSIVAGLKSAPSEQLLNIFESCMRNPMGNIIKIVKGIGETFCQHY 442
Query: 83 -------------WAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCML 124
+A R A L YK+LET+ E + LH +++ L FH+ ++
Sbjct: 443 TQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLEQDIFHKSLM 502
Query: 125 ACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEER 184
AC E+VL + + F ++E + + F KVI+ IR EE L R++ +HLNS+EE+
Sbjct: 503 ACCLEIVLFAYSS-PRTFPWIIEVLDLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQ 561
Query: 185 LLESMVWEKGSSMYNSL 201
+LES+ W S+++ +L
Sbjct: 562 ILESLAWTNNSALWEAL 578
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 63/265 (23%)
Query: 364 GGGEPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFF 423
G +P + + + K+ LA+VR+ + +L +S ++R ++ C + TL L
Sbjct: 777 GVSKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT-CFEFTLVHCPDLMK 835
Query: 424 NCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF------------- 470
+ H+DQ++LC FY +AK+++ TF+EI+ +Y QPQ V+RSV
Sbjct: 836 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPGGVVVYNG 895
Query: 471 -------------------------DHVDIITFYNKIFAPTVKPLLVELGPVGTAMKTNR 505
+ D+I FYN ++ VK A+K +
Sbjct: 896 DCEMTDGDIEDATKTPNCSSEPVKEERGDLIKFYNTVYVGRVKSF---------ALKYDL 946
Query: 506 DSEVNHNNDA---SVFPALPDM--SPKKVSATHSVYVSPLRTSEMDALISHSSKSYYACV 560
++ +H DA S FP + SP+++S HS+YVSP + A ++ S Y
Sbjct: 947 SNQ-DHIMDAPPLSPFPHIKQQPGSPRRISQQHSLYVSPHKNG---AGLTPRSALLYKFN 1002
Query: 561 GESTHAYSPFKDLTDINHRLNSNRR 585
G SP K L DIN+ + +
Sbjct: 1003 G------SPSKSLKDINNMIRQGEQ 1021
>sp|P13405|RB_MOUSE Retinoblastoma-associated protein OS=Mus musculus GN=Rb1 PE=1 SV=2
Length = 921
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 45/199 (22%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNIWAE-------------- 85
TPV T M T + L I+ +PS +L N +NI
Sbjct: 367 TPVRTVMNTIQQLMVILNSASDQPSENLISYFNNCTVNPKENILKRVKDVGHIFKEKFAN 426
Query: 86 -----------QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E
Sbjct: 427 AVGQGCVDIGVQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALE 486
Query: 130 LVLATHKTVTMLFLA---------VLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNS 180
+V+AT+ T+ L +L + + AF+ KVI+SFI+ E +L RE+ +HL
Sbjct: 487 VVMATYSRSTLQHLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLER 546
Query: 181 LEERLLESMVWEKGSSMYN 199
E R++ES+ W S +++
Sbjct: 547 CEHRIMESLAWLSDSPLFD 565
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 24/186 (12%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T + + + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 633 KPLKSTSLALFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRH 692
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V + II FYN +
Sbjct: 693 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLIREEEFDSIIVFYNSV 752
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSAT------HSVY 536
F +K +++ S P +P SP K S++ ++Y
Sbjct: 753 FMQRLKTNILQYASTRPPT-------------LSPIPHIP-RSPYKFSSSPLRIPGGNIY 798
Query: 537 VSPLRT 542
+SPL++
Sbjct: 799 ISPLKS 804
>sp|P06400|RB_HUMAN Retinoblastoma-associated protein OS=Homo sapiens GN=RB1 PE=1 SV=2
Length = 928
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 14/128 (10%)
Query: 86 QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAELVLATHKTVT- 139
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E+V+AT+ T
Sbjct: 444 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 503
Query: 140 --------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLLESMVW 191
+ F +L + + AF+ KVI+SFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 504 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAW 563
Query: 192 EKGSSMYN 199
S +++
Sbjct: 564 LSDSPLFD 571
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + ERL E + + TL L + H
Sbjct: 640 KPLKSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRH 699
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V ++ II FYN +
Sbjct: 700 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSV 759
Query: 483 FAPTVK 488
F +K
Sbjct: 760 FMQRLK 765
>sp|Q90600|RB_CHICK Retinoblastoma-associated protein OS=Gallus gallus GN=RB1 PE=1 SV=1
Length = 921
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 92/201 (45%), Gaps = 47/201 (23%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNI--------------WAE 85
TPV AM T + L I+ KPS L N D+I +AE
Sbjct: 363 TPVRAAMNTIQQLMMILNSATDKPSDTLIAYFNNCTVNPEDSILKRVESLGHIFKKKFAE 422
Query: 86 -----------QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
QR ++L Y+V+E+M +E + L N + L FH +LAC+ E
Sbjct: 423 AVGQGCAEIGSQRYQLGVRLYYRVMESMLKSEEERLSVHNFSKLLNDNIFHTSLLACALE 482
Query: 130 LVLATHKTVT-----------MLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHL 178
+V+AT+ + F +L + AF+ KVI+SFI+ E SL R++ +HL
Sbjct: 483 IVMATYGRTASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVEPSLTRDMIKHL 542
Query: 179 NSLEERLLESMVWEKGSSMYN 199
E R++ES+ W+ S +++
Sbjct: 543 ERCEHRIMESLAWQSDSPLFD 563
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 89/180 (49%), Gaps = 11/180 (6%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R++ + RL E + + TL + L + H
Sbjct: 632 KPQKSTSLSLFYKKVFRLAYLRLHTLFFRLLSEHPDLEPLIWTLFQHTLQNESELMRDRH 691
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y + P + F+ V + II FYN +
Sbjct: 692 LDQIMMCSMYGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLIREEQYDSIIVFYNLV 751
Query: 483 FAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRT 542
F +K +++ +NR ++ P SP++V A +++Y+SPL++
Sbjct: 752 FMQKLKTNILQYA-------SNRPPTLSPIPHIPRSPYQFSNSPRRVPAGNNIYISPLKS 804
>sp|P33568|RB_RAT Retinoblastoma-associated protein OS=Rattus norvegicus GN=Rb1 PE=1
SV=3
Length = 920
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 47/200 (23%)
Query: 46 TPVSTAMTTAKWLRTIICPLPSKPSADLQG------ANLMDNIWAE-------------- 85
TPV T M T + L I+ +PS +L N +NI
Sbjct: 366 TPVRTVMNTIQQLMVILNSASDQPSENLISYFSNCTVNPKENILKRVKDVGHIFKEKFAS 425
Query: 86 -----------QRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLACSAE 129
QR ++L Y+V+E+M +E + L +N + L FH +LAC+ E
Sbjct: 426 AVGQGCIDIGAQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALE 485
Query: 130 LVLATHKTVTML----------FLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLN 179
+V+AT+ + +ML F +L + + AF+ KVI+SFI+ E +L RE+ +HL
Sbjct: 486 VVMATY-SRSMLQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLE 544
Query: 180 SLEERLLESMVWEKGSSMYN 199
E R++ES+ W S +++
Sbjct: 545 RCEHRIMESLAWLSDSPLFD 564
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 367 EPCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCH 426
+P T +++ + K+ +LA +R+N + RL E + + TL L + H
Sbjct: 632 KPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLENEYELMKDRH 691
Query: 427 IDQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF----DHVDIITFYNKI 482
+DQI++C YG+ K+ ++L FK I+ Y P + F+ V + II FYN +
Sbjct: 692 LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLIREEEFDSIIVFYNSV 751
Query: 483 FAPTVK 488
F +K
Sbjct: 752 FMQRLK 757
>sp|Q24472|RBF_DROME Retinoblastoma family protein OS=Drosophila melanogaster GN=Rbf
PE=1 SV=2
Length = 845
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 28/231 (12%)
Query: 374 INICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILC 433
+ I K+ L +RI + L L ++ ES++ + + ++ T L + H+DQ I+C
Sbjct: 582 LQIFLRKVYLLGWLRIQKLCSELSLCEKTPESIWHIF-EHSITHETELMKDRHLDQNIMC 640
Query: 434 CFYGVAKISQL-NLTFKEIIYNYGKQPQCKPQVFRSVFDHV---------DIITFYNKIF 483
Y ++ ++ + F +I+ Y QPQ V+R VF + DII FYN +
Sbjct: 641 AIYIYIRVKRMEDPKFSDIMRAYRNQPQAVNSVYREVFIDINEDGEPKVKDIIHFYNHTY 700
Query: 484 APTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKVSATHSVYVSPLRTS 543
P ++ +++ V T + R S++ S P PKKV+ +HS++VS + +
Sbjct: 701 VPLMRQFVIDYLNV-TPDVSGRASDLQ----LSPHPKERAAQPKKVTQSHSLFVSQMSKN 755
Query: 544 EMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNRRVRGALNFDD 594
E+ S + Y C SP KDL +N ++ +R+ L+F D
Sbjct: 756 EIQQ--SPNQMVYSFC-------RSPAKDLQAMNEKVRGGKRM---LSFGD 794
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 118 LFHRCMLACSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRH---EESLPREL 174
+F+ ++AC ELVL +KT + F VL+ I+AF K+I+ +RH E L R L
Sbjct: 475 IFNITLMACCVELVLEAYKT-ELKFPWVLDCFSISAFEFQKIIEIVVRHGSHEGCLNRSL 533
Query: 175 RRHLNSLEERLLESMVWEKGSSMYNSLTVAR 205
+HLNS+EE LE + W + S+++ + A+
Sbjct: 534 IKHLNSIEETCLERLAWARNSTVWEMIASAQ 564
>sp|Q64700|RBL2_MOUSE Retinoblastoma-like protein 2 OS=Mus musculus GN=Rbl2 PE=1 SV=3
Length = 1135
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 413 VTPVSTAAHSLSRLHTMLSGLRNAPSEKLERILRSCSRDPTQAIADRLKEMYEIYSQHFQ 472
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I + R + L YKVLE++ E + L +L+ + FHR +LA
Sbjct: 473 PDENFSNCAKEIANKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGVLEHDAFHRSLLA 531
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V +HK F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 532 CCLEVVAFSHKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 590
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S +++ +
Sbjct: 591 LDHLAWKTKSPLWDRI 606
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 74/132 (56%), Gaps = 13/132 (9%)
Query: 351 LPPPLYPTRSNPGGG----GEPCAETGIN--------ICFCKINKLAAVRINAMVERLQL 398
+P P+ + +PGG G+P + I + F K+ LA VR+ + +L +
Sbjct: 797 VPGPVAIQQISPGGQQQNPGQPLTSSSIRPRKTSSLALFFRKVYYLAGVRLRDLCIKLDI 856
Query: 399 SQQIRESVYCLCPKRTLNQRTSLFFNCHIDQIILCCFYGVAKISQLNLTFKEIIYNYGKQ 458
S ++R+ ++ C + ++ Q T L + H+DQ+++C Y +AK+++ + +F+ I+ Y Q
Sbjct: 857 SDELRKKIWT-CFEFSIIQCTELMMDRHLDQLLMCAIYVMAKVTKEDRSFQNIMRCYRTQ 915
Query: 459 PQCKPQVFRSVF 470
PQ + QV+RSV
Sbjct: 916 PQARSQVYRSVL 927
>sp|Q08999|RBL2_HUMAN Retinoblastoma-like protein 2 OS=Homo sapiens GN=RBL2 PE=1 SV=3
Length = 1139
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 41/196 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQG----------------------------- 75
VTPVSTA + L T++ L + PS L+
Sbjct: 416 VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFEIYSQHFQ 475
Query: 76 -----ANLMDNIWAEQRRLEALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLA 125
+N I ++ R + L YKVLE++ E + L +L+ + FHR +LA
Sbjct: 476 PDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLA 534
Query: 126 CSAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERL 185
C E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++
Sbjct: 535 CCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 593
Query: 186 LESMVWEKGSSMYNSL 201
L+ + W+ S ++ +
Sbjct: 594 LDHLAWKPESPLWEKI 609
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LAAVR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 830 PRKTSSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWT-CFEFSIIQCPELMMDRHL 888
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 889 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 931
Score = 33.1 bits (74), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 31/125 (24%)
Query: 474 DIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDA---SVFPALPDMSPKKV- 529
D+I FYN I+ +K AMK ++ N DA S +P + SP+++
Sbjct: 1004 DLIQFYNNIYIKQIKTF---------AMKYSQ-----ANMDAPPLSPYPFVRTGSPRRIQ 1049
Query: 530 -SATHSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNR---R 585
S H VY+SP + + ++S K +Y + SP K L +IN + + +
Sbjct: 1050 LSQNHPVYISPHKN---ETMLSPREKIFYY------FSNSPSKRLREINSMIRTGETPTK 1100
Query: 586 VRGAL 590
RG L
Sbjct: 1101 KRGIL 1105
>sp|O55081|RBL2_RAT Retinoblastoma-like protein 2 OS=Rattus norvegicus GN=Rbl2 PE=1
SV=1
Length = 1135
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 39/195 (20%)
Query: 45 VTPVSTAMTTAKWLRTIICPLPSKPSADLQGA----------------NLMDNIWAEQRR 88
VTPVSTA + L T++ L + PS L+ M I+++ +
Sbjct: 413 VTPVSTATHSLNRLHTMLAGLRNAPSEKLEQILRSCSRDPTRAIADRLREMYEIYSQHFQ 472
Query: 89 LE-----------------ALKLNYKVLETMCTAEAQVLHAKNLTSL-----FHRCMLAC 126
+ A L YKVLE++ E + L +L+ + FH+ +LAC
Sbjct: 473 PDENVSNCAKEMANKHFRFAEMLYYKVLESVIEQEQKRLGDMDLSGVLEQDAFHKSLLAC 532
Query: 127 SAELVLATHKTVTMLFLAVLERIGITAFNLSKVIQSFIRHEESLPRELRRHLNSLEERLL 186
E+V ++K F + E + ++ KVI+ FIR E+ L RE+ +HLN +EE++L
Sbjct: 533 CLEVVAFSYKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQIL 591
Query: 187 ESMVWEKGSSMYNSL 201
+ + W+ S +++ +
Sbjct: 592 DHLAWKTKSPLWDRI 606
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 368 PCAETGINICFCKINKLAAVRINAMVERLQLSQQIRESVYCLCPKRTLNQRTSLFFNCHI 427
P + +++ F K+ LA VR+ + +L +S ++R+ ++ C + ++ Q L + H+
Sbjct: 826 PRKTSSLSLFFRKVYYLAGVRLRDLCTKLDISDELRKKIWT-CFEFSIVQCPELMMDRHL 884
Query: 428 DQIILCCFYGVAKISQLNLTFKEIIYNYGKQPQCKPQVFRSVF 470
DQ+++C Y +AK+++ + +F+ I+ Y QPQ + QV+RSV
Sbjct: 885 DQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVL 927
Score = 36.2 bits (82), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 474 DIITFYNKIFAPTVKPLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSPKKV--SA 531
D+I FYN I+ ++ ++ + M T S +P + SP++V S
Sbjct: 998 DLIQFYNNIYRKQIQTFAMKYSQANSQMDT---------PPLSPYPFVRTGSPRRVQLSQ 1048
Query: 532 THSVYVSPLRTSEMDALISHSSKSYYACVGESTHAYSPFKDLTDINHRLNSNR---RVRG 588
+H +Y+SP + +A++S K +Y + SP K L +IN + + + RG
Sbjct: 1049 SHPIYISPHKN---EAMLSPREKIFYY------FSNSPSKRLREINSMIRTGETPTKKRG 1099
Query: 589 ALNFDD 594
L DD
Sbjct: 1100 IL-LDD 1104
>sp|Q8P447|SPEE_XANCP Spermidine synthase OS=Xanthomonas campestris pv. campestris
(strain ATCC 33913 / NCPPB 528 / LMG 568) GN=speE PE=3
SV=1
Length = 285
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 12/94 (12%)
Query: 274 DAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELVTDDYRSVLVERNN-- 331
D +A N +G + V P +FN FY +C+ L D +LV+++
Sbjct: 141 DGVAYMANCPAGSVDIVIVDSTDPVGPAEGLFNKSFYESCFKALKDD---GILVQQSESP 197
Query: 332 --FTSLVKDCL-----LGLNNLKSKPLPPPLYPT 358
L+K+ G + K+ P P P YPT
Sbjct: 198 LALLDLIKEMRTEMGKAGFQSFKTLPFPQPCYPT 231
>sp|B0RXN7|SPEE_XANCB Spermidine synthase OS=Xanthomonas campestris pv. campestris
(strain B100) GN=speE PE=3 SV=1
Length = 285
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 12/94 (12%)
Query: 274 DAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELVTDDYRSVLVERNN-- 331
D +A N +G + V P +FN FY +C+ L D +LV+++
Sbjct: 141 DGVAYMANCPAGSVDIVIVDSTDPVGPAEGLFNKSFYESCFKALKDD---GILVQQSESP 197
Query: 332 --FTSLVKDCL-----LGLNNLKSKPLPPPLYPT 358
L+K+ G + K+ P P P YPT
Sbjct: 198 LALLDLIKEMRTEMGKAGFQSFKTLPFPQPCYPT 231
>sp|Q4UPN0|SPEE_XANC8 Spermidine synthase OS=Xanthomonas campestris pv. campestris
(strain 8004) GN=speE PE=3 SV=1
Length = 285
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 12/94 (12%)
Query: 274 DAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELVTDDYRSVLVERNN-- 331
D +A N +G + V P +FN FY +C+ L D +LV+++
Sbjct: 141 DGVAYMANCPAGSVDIVIVDSTDPVGPAEGLFNKSFYESCFKALKDD---GILVQQSESP 197
Query: 332 --FTSLVKDCL-----LGLNNLKSKPLPPPLYPT 358
L+K+ G + K+ P P P YPT
Sbjct: 198 LALLDLIKEMRTEMGKAGFQSFKTLPFPQPCYPT 231
>sp|Q8PFQ4|SPEE_XANAC Spermidine synthase OS=Xanthomonas axonopodis pv. citri (strain
306) GN=speE PE=3 SV=1
Length = 285
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 12/94 (12%)
Query: 274 DAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELVTDDYRSVLVERNNFT 333
D +A N +G + V P +FN FY +C+ L D +LV+++
Sbjct: 141 DGVAYMANCQAGSVDIVIVDSTDPVGPAEGLFNKAFYESCFKALKDD---GILVQQSESP 197
Query: 334 SLVKDCL---------LGLNNLKSKPLPPPLYPT 358
+ D + G + K+ P P P YPT
Sbjct: 198 LALLDLINEMRTEMGKAGFQSFKTLPFPQPCYPT 231
>sp|A0JPN3|BPIB1_RAT BPI fold-containing family B member 1 OS=Rattus norvegicus
GN=Bpifb1 PE=2 SV=1
Length = 471
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 16/176 (9%)
Query: 151 ITAFNLSKVIQSFIRHEESLPRELRRHLN-------SLEERLLESMVWEKGSSMYNSLTV 203
I F +S +Q+ IR E S R +L+ +L LL + + S N + +
Sbjct: 124 IVEFQMSTEVQALIRVERSKNGPARLNLSDCSSNESTLRLSLLHKLSFVVNSLAKNVMNL 183
Query: 204 ARPALSAEINLGFTDILFQDSQDSWEEFTSILTVPPTDSPTRQHYENLPWWKEPFTEVDS 263
PAL + ++ Q D +E+F + T P SP ++ L P + +
Sbjct: 184 LMPALPQIVKSHLCPVIQQAFDDMYEDFLRLTTAPIALSPGALEFDLL----SPAIQDSN 239
Query: 264 IFLLIPMPSLDAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELVT 319
I + LD+ A N+ +G +P+ ET+P + F+ + +VT
Sbjct: 240 ILFNLKAKLLDSQARVTNWFNGSATPL-----METTPDRAPFSLTVRQDLVNAIVT 290
>sp|B4SM23|SPEE_STRM5 Spermidine synthase OS=Stenotrophomonas maltophilia (strain R551-3)
GN=speE PE=3 SV=1
Length = 283
Score = 35.0 bits (79), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 14/95 (14%)
Query: 274 DAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELVTDDYRSVLVERNNFT 333
D +A N +G + V P +FN FYA+C+ L D +LV+++ +
Sbjct: 141 DGVAYMANCPAGSVDVVIVDSTDPVGPGEGLFNKAFYASCFKALKDD---GILVQQSE-S 196
Query: 334 SLVKDCLL----------GLNNLKSKPLPPPLYPT 358
L++ L+ G + K+ P P P YPT
Sbjct: 197 PLMQLELINEMRTEMGKAGFGSFKTLPFPQPCYPT 231
>sp|Q92796|DLG3_HUMAN Disks large homolog 3 OS=Homo sapiens GN=DLG3 PE=1 SV=2
Length = 817
Score = 35.0 bits (79), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Query: 300 PVCSIFNFQFYANCYGELVTDDYRSVLVERNNFTSLVKDCLLGLNNLKSKPLPPPLYPTR 359
P C+ N +Y G Y +++ER N + L G++N P P ++ T+
Sbjct: 107 PECTCTNRDWYEQVNGSDGMFKYEEIVLERGN-SGLGFSIAGGIDN-PHVPDDPGIFITK 164
Query: 360 SNPGGGGEPCAETGINICFCKINKL 384
PGG G+N C ++N++
Sbjct: 165 IIPGGAAAMDGRLGVNDCVLRVNEV 189
>sp|Q5H6E7|SPEE_XANOR Spermidine synthase OS=Xanthomonas oryzae pv. oryzae (strain
KACC10331 / KXO85) GN=speE PE=3 SV=1
Length = 285
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 12/94 (12%)
Query: 274 DAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELVTDDYRSVLVERNN-- 331
D +A N +G + V P +FN FY +C+ L D +LV+++
Sbjct: 141 DGVAYMANCPAGSVDIVIVDSTDPVGPAEGLFNKAFYESCFKALKDD---GLLVQQSESP 197
Query: 332 --FTSLVKDCL-----LGLNNLKSKPLPPPLYPT 358
L+K+ G + K+ P P P YPT
Sbjct: 198 LALLDLIKEMRTEMGKAGFQSFKTLPFPQPCYPT 231
>sp|B2SHF6|SPEE_XANOP Spermidine synthase OS=Xanthomonas oryzae pv. oryzae (strain
PXO99A) GN=speE PE=3 SV=1
Length = 285
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 12/94 (12%)
Query: 274 DAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELVTDDYRSVLVERNN-- 331
D +A N +G + V P +FN FY +C+ L D +LV+++
Sbjct: 141 DGVAYMANCPAGSVDIVIVDSTDPVGPAEGLFNKAFYESCFKALKDD---GLLVQQSESP 197
Query: 332 --FTSLVKDCL-----LGLNNLKSKPLPPPLYPT 358
L+K+ G + K+ P P P YPT
Sbjct: 198 LALLDLIKEMRTEMGKAGFQSFKTLPFPQPCYPT 231
>sp|Q2P928|SPEE_XANOM Spermidine synthase OS=Xanthomonas oryzae pv. oryzae (strain MAFF
311018) GN=speE PE=3 SV=1
Length = 285
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 12/94 (12%)
Query: 274 DAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELVTDDYRSVLVERNN-- 331
D +A N +G + V P +FN FY +C+ L D +LV+++
Sbjct: 141 DGVAYMANCPAGSVDIVIVDSTDPVGPAEGLFNKAFYESCFKALKDD---GLLVQQSESP 197
Query: 332 --FTSLVKDCL-----LGLNNLKSKPLPPPLYPT 358
L+K+ G + K+ P P P YPT
Sbjct: 198 LALLDLIKEMRTEMGKAGFQSFKTLPFPQPCYPT 231
>sp|Q3BN93|SPEE_XANC5 Spermidine synthase OS=Xanthomonas campestris pv. vesicatoria
(strain 85-10) GN=speE PE=3 SV=1
Length = 285
Score = 33.1 bits (74), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 12/94 (12%)
Query: 274 DAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELVTDDYRSVLVERNNFT 333
D +A N +G + V P +FN FY +C+ L + +LV+++
Sbjct: 141 DGVAYMANCPAGSVDIVIVDSTDPVGPAEGLFNKAFYESCFKALKDE---GILVQQSESP 197
Query: 334 SLVKDCL---------LGLNNLKSKPLPPPLYPT 358
+ D + G + K+ P P P YPT
Sbjct: 198 LALLDLINEMRTEMGKAGFQSFKTLPFPQPCYPT 231
>sp|B2FKR1|SPEE_STRMK Spermidine synthase OS=Stenotrophomonas maltophilia (strain K279a)
GN=speE PE=3 SV=1
Length = 283
Score = 32.7 bits (73), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 14/95 (14%)
Query: 274 DAIAMHINFSSGGLSPVHSLHKHETSPVCSIFNFQFYANCYGELVTDDYRSVLVERNNFT 333
D +A N +G + V P +FN FY +C+ L D +LV+++ +
Sbjct: 141 DGVAYMANCPAGSVDVVIVDSTDPVGPGEGLFNKAFYESCFKALKDD---GILVQQSE-S 196
Query: 334 SLVKDCLL----------GLNNLKSKPLPPPLYPT 358
L++ L+ G + K+ P P P YPT
Sbjct: 197 PLMQLELINEMRAEMGKAGFGSFKTLPFPQPCYPT 231
>sp|P70290|EM55_MOUSE 55 kDa erythrocyte membrane protein OS=Mus musculus GN=Mpp1 PE=1
SV=1
Length = 466
Score = 32.7 bits (73), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 468 SVFDHVDIITFYNKIFAPTVK-PLLVELGPVGTAMKTNRDSEVNHNNDASVFPALPDMSP 526
S+FD +D++++ + P K LV +G G ++ ++HN + +PA P
Sbjct: 261 SIFDQLDVVSYEEVVRLPAFKRKTLVLIGASGVGRSHIKNGLLSHNPEKFAYPAPYTTRP 320
Query: 527 KKVSATHSVYVSPLRTSEMDALIS 550
K S + T EM IS
Sbjct: 321 PKKSEEDGKEYHFISTEEMTKNIS 344
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 226,568,005
Number of Sequences: 539616
Number of extensions: 9294703
Number of successful extensions: 23142
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 22800
Number of HSP's gapped (non-prelim): 124
length of query: 633
length of database: 191,569,459
effective HSP length: 124
effective length of query: 509
effective length of database: 124,657,075
effective search space: 63450451175
effective search space used: 63450451175
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)