Query 046346
Match_columns 209
No_of_seqs 146 out of 1475
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 19:38:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046346.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046346hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a6d_A Hydroxyindole O-methylt 100.0 7.1E-34 2.4E-38 241.2 19.8 194 13-209 6-251 (353)
2 3lst_A CALO1 methyltransferase 100.0 1.2E-30 4.1E-35 220.7 17.8 196 9-209 16-254 (348)
3 3p9c_A Caffeic acid O-methyltr 100.0 1.2E-30 3.9E-35 222.3 16.4 196 11-209 16-266 (364)
4 1fp2_A Isoflavone O-methyltran 100.0 1.9E-30 6.6E-35 219.7 15.5 205 2-209 3-253 (352)
5 3gwz_A MMCR; methyltransferase 100.0 8.2E-30 2.8E-34 217.3 18.5 193 12-209 35-275 (369)
6 1zg3_A Isoflavanone 4'-O-methy 100.0 4.9E-30 1.7E-34 217.7 16.1 202 6-209 1-258 (358)
7 3reo_A (ISO)eugenol O-methyltr 100.0 5.8E-30 2E-34 218.2 15.7 196 11-209 17-268 (368)
8 3dp7_A SAM-dependent methyltra 100.0 1.2E-29 4.2E-34 215.7 17.1 204 1-209 1-255 (363)
9 3i53_A O-methyltransferase; CO 100.0 2.2E-30 7.6E-35 217.5 11.7 191 14-209 4-242 (332)
10 2ip2_A Probable phenazine-spec 100.0 9.8E-29 3.4E-33 207.4 17.1 188 14-209 7-240 (334)
11 3mcz_A O-methyltransferase; ad 100.0 4.7E-28 1.6E-32 204.7 19.5 195 9-209 18-255 (352)
12 1fp1_D Isoliquiritigenin 2'-O- 100.0 7E-28 2.4E-32 205.4 19.2 197 11-209 18-274 (372)
13 1x19_A CRTF-related protein; m 100.0 2.7E-27 9.1E-32 200.8 19.7 194 8-209 23-263 (359)
14 2r3s_A Uncharacterized protein 99.9 1.2E-26 4.2E-31 194.4 16.1 190 16-208 7-238 (335)
15 1qzz_A RDMB, aclacinomycin-10- 99.9 1.1E-26 3.8E-31 197.6 14.2 199 6-209 7-255 (374)
16 1tw3_A COMT, carminomycin 4-O- 99.9 8.1E-26 2.8E-30 191.5 15.8 188 16-208 20-255 (360)
17 4gek_A TRNA (CMO5U34)-methyltr 99.1 6.2E-10 2.1E-14 90.2 11.8 98 111-208 35-145 (261)
18 2qm3_A Predicted methyltransfe 99.0 3E-10 1E-14 96.5 6.2 65 143-208 172-247 (373)
19 3dtn_A Putative methyltransfer 98.9 7.9E-09 2.7E-13 81.4 10.9 94 114-208 13-115 (234)
20 3kr9_A SAM-dependent methyltra 98.9 2.2E-09 7.7E-14 85.0 7.2 67 142-208 14-90 (225)
21 3e05_A Precorrin-6Y C5,15-meth 98.9 1.7E-08 5.9E-13 78.0 10.8 76 131-208 30-114 (204)
22 3pfg_A N-methyltransferase; N, 98.8 1.2E-08 4E-13 82.0 9.3 94 113-208 17-116 (263)
23 1nv8_A HEMK protein; class I a 98.8 1E-08 3.5E-13 84.0 8.8 65 143-208 123-198 (284)
24 3lec_A NADB-rossmann superfami 98.8 5.9E-09 2E-13 82.8 7.1 67 142-208 20-96 (230)
25 3dlc_A Putative S-adenosyl-L-m 98.8 1.6E-08 5.3E-13 78.4 9.2 90 115-208 14-117 (219)
26 3gnl_A Uncharacterized protein 98.8 7.4E-09 2.5E-13 82.9 7.1 67 142-208 20-96 (244)
27 1nkv_A Hypothetical protein YJ 98.8 2.3E-08 7.9E-13 79.7 10.0 76 130-208 25-109 (256)
28 3jwh_A HEN1; methyltransferase 98.8 1.4E-08 4.9E-13 79.1 8.1 75 132-208 20-108 (217)
29 3mb5_A SAM-dependent methyltra 98.8 2.4E-08 8.1E-13 79.8 9.2 76 131-208 83-168 (255)
30 3bus_A REBM, methyltransferase 98.8 4.3E-08 1.5E-12 78.9 10.8 75 131-208 51-135 (273)
31 1ve3_A Hypothetical protein PH 98.8 8.5E-09 2.9E-13 80.6 6.3 64 143-208 38-109 (227)
32 3ou2_A SAM-dependent methyltra 98.8 5.3E-08 1.8E-12 75.4 10.7 75 131-208 35-113 (218)
33 3jwg_A HEN1, methyltransferase 98.8 1.6E-08 5.5E-13 78.9 7.6 76 131-208 19-108 (219)
34 2p35_A Trans-aconitate 2-methy 98.8 1.9E-08 6.5E-13 80.2 8.1 75 132-208 24-101 (259)
35 1vl5_A Unknown conserved prote 98.8 1.8E-08 6.1E-13 80.7 7.9 77 128-208 24-109 (260)
36 1yzh_A TRNA (guanine-N(7)-)-me 98.8 3.1E-08 1.1E-12 77.2 9.0 66 143-208 41-117 (214)
37 3g07_A 7SK snRNA methylphospha 98.8 2.2E-08 7.5E-13 82.1 8.5 44 141-184 44-88 (292)
38 3ege_A Putative methyltransfer 98.8 2.7E-08 9.1E-13 80.0 8.8 73 131-208 24-100 (261)
39 2o57_A Putative sarcosine dime 98.8 3.9E-08 1.3E-12 80.3 9.9 77 131-208 68-156 (297)
40 1yb2_A Hypothetical protein TA 98.8 2.4E-08 8.3E-13 81.0 8.6 76 131-208 100-185 (275)
41 3f4k_A Putative methyltransfer 98.8 4E-08 1.4E-12 78.3 9.7 75 132-208 36-120 (257)
42 3ujc_A Phosphoethanolamine N-m 98.8 2.9E-08 9.9E-13 79.3 8.8 75 131-208 45-126 (266)
43 3gu3_A Methyltransferase; alph 98.7 2.2E-08 7.5E-13 81.6 8.0 68 141-208 20-95 (284)
44 3hm2_A Precorrin-6Y C5,15-meth 98.7 2.7E-08 9.2E-13 74.8 7.8 74 132-208 16-100 (178)
45 3dh0_A SAM dependent methyltra 98.7 2.4E-08 8.2E-13 77.7 7.7 76 131-208 27-112 (219)
46 3bxo_A N,N-dimethyltransferase 98.7 5.2E-08 1.8E-12 76.7 9.7 64 142-207 39-105 (239)
47 3ntv_A MW1564 protein; rossman 98.7 1.6E-08 5.4E-13 80.1 6.7 68 141-208 69-148 (232)
48 4hg2_A Methyltransferase type 98.7 2.7E-08 9.3E-13 80.3 8.0 64 142-208 38-105 (257)
49 3kkz_A Uncharacterized protein 98.7 4.1E-08 1.4E-12 79.0 9.0 67 141-208 44-120 (267)
50 3vc1_A Geranyl diphosphate 2-C 98.7 8.9E-08 3E-12 79.0 11.2 85 122-208 97-191 (312)
51 3hem_A Cyclopropane-fatty-acyl 98.7 5.3E-08 1.8E-12 79.8 9.7 74 131-208 62-143 (302)
52 4dcm_A Ribosomal RNA large sub 98.7 4.2E-08 1.4E-12 83.4 9.1 75 132-208 213-298 (375)
53 3njr_A Precorrin-6Y methylase; 98.7 8E-08 2.7E-12 74.7 9.9 72 133-208 47-128 (204)
54 2qe6_A Uncharacterized protein 98.7 1.3E-07 4.4E-12 77.0 11.3 56 143-198 77-139 (274)
55 2b3t_A Protein methyltransfera 98.7 6.2E-08 2.1E-12 78.6 9.4 66 143-208 109-182 (276)
56 3g5t_A Trans-aconitate 3-methy 98.7 4.6E-08 1.6E-12 80.1 8.7 67 142-208 35-119 (299)
57 1pjz_A Thiopurine S-methyltran 98.7 2.3E-08 7.7E-13 77.7 6.3 66 141-208 20-107 (203)
58 3mgg_A Methyltransferase; NYSG 98.7 4.4E-08 1.5E-12 79.1 8.2 68 141-208 35-111 (276)
59 3q87_B N6 adenine specific DNA 98.7 4.3E-08 1.5E-12 73.9 7.5 60 142-208 22-84 (170)
60 1jsx_A Glucose-inhibited divis 98.7 5.4E-08 1.8E-12 75.1 8.2 65 144-208 66-138 (207)
61 2fca_A TRNA (guanine-N(7)-)-me 98.7 4.5E-08 1.5E-12 76.6 7.5 66 143-208 38-114 (213)
62 3g5l_A Putative S-adenosylmeth 98.7 8.1E-08 2.8E-12 76.5 9.1 74 132-208 35-114 (253)
63 3hnr_A Probable methyltransfer 98.7 5.5E-08 1.9E-12 75.7 7.9 74 131-208 35-112 (220)
64 4dzr_A Protein-(glutamine-N5) 98.7 6.1E-09 2.1E-13 80.5 2.2 67 142-208 29-107 (215)
65 3uwp_A Histone-lysine N-methyl 98.7 3.8E-08 1.3E-12 84.3 7.3 76 131-208 163-258 (438)
66 3bkw_A MLL3908 protein, S-aden 98.7 7.9E-08 2.7E-12 75.8 8.7 93 113-208 11-113 (243)
67 3mq2_A 16S rRNA methyltransfer 98.7 8.4E-08 2.9E-12 74.8 8.7 67 141-207 25-103 (218)
68 3ccf_A Cyclopropane-fatty-acyl 98.7 6E-08 2E-12 78.6 8.1 75 130-208 46-123 (279)
69 2bm8_A Cephalosporin hydroxyla 98.7 6.8E-08 2.3E-12 76.9 8.2 66 143-208 81-158 (236)
70 2h00_A Methyltransferase 10 do 98.6 5.2E-08 1.8E-12 77.9 7.3 66 143-208 65-146 (254)
71 2yxd_A Probable cobalt-precorr 98.6 4.7E-08 1.6E-12 73.5 6.6 73 132-208 26-106 (183)
72 3grz_A L11 mtase, ribosomal pr 98.6 1.5E-07 5E-12 72.7 9.5 66 142-208 59-131 (205)
73 1kpg_A CFA synthase;, cyclopro 98.6 1.3E-07 4.4E-12 76.7 9.6 74 131-208 54-135 (287)
74 3fzg_A 16S rRNA methylase; met 98.6 4.2E-08 1.4E-12 75.6 6.2 66 141-208 47-121 (200)
75 1xxl_A YCGJ protein; structura 98.6 1.1E-07 3.7E-12 75.4 8.7 76 129-208 9-93 (239)
76 3fpf_A Mtnas, putative unchara 98.6 6.3E-08 2.2E-12 79.6 7.4 68 141-208 120-194 (298)
77 3b3j_A Histone-arginine methyl 98.6 1.6E-07 5.4E-12 82.3 10.4 76 130-208 147-230 (480)
78 3dxy_A TRNA (guanine-N(7)-)-me 98.6 4.3E-08 1.5E-12 77.1 5.8 66 143-208 34-111 (218)
79 3gjy_A Spermidine synthase; AP 98.6 5.2E-08 1.8E-12 80.9 6.6 65 144-208 90-165 (317)
80 3g2m_A PCZA361.24; SAM-depende 98.6 7.6E-08 2.6E-12 78.8 7.5 88 116-208 57-156 (299)
81 3ocj_A Putative exported prote 98.6 2.7E-08 9.4E-13 81.8 4.3 68 141-208 116-193 (305)
82 1o54_A SAM-dependent O-methylt 98.6 1.2E-07 4.1E-12 76.9 8.1 76 131-208 102-187 (277)
83 2pxx_A Uncharacterized protein 98.6 1.7E-07 6E-12 72.2 8.6 67 141-208 40-113 (215)
84 2yqz_A Hypothetical protein TT 98.6 1.8E-07 6.3E-12 74.5 9.0 66 141-208 37-110 (263)
85 1fbn_A MJ fibrillarin homologu 98.6 1.4E-07 4.7E-12 74.4 8.1 67 141-207 72-148 (230)
86 1dus_A MJ0882; hypothetical pr 98.6 2.2E-07 7.5E-12 70.3 9.0 74 131-208 42-125 (194)
87 3bkx_A SAM-dependent methyltra 98.6 1.4E-07 4.7E-12 76.0 8.1 76 131-208 33-128 (275)
88 3tfw_A Putative O-methyltransf 98.6 4.9E-08 1.7E-12 78.1 5.3 68 141-208 61-142 (248)
89 3ckk_A TRNA (guanine-N(7)-)-me 98.6 9.2E-08 3.2E-12 76.1 6.9 67 142-208 45-129 (235)
90 2gpy_A O-methyltransferase; st 98.6 2.7E-07 9.3E-12 72.7 9.6 68 141-208 52-132 (233)
91 3l8d_A Methyltransferase; stru 98.6 1.7E-07 5.7E-12 73.9 8.3 66 141-208 51-122 (242)
92 3duw_A OMT, O-methyltransferas 98.6 4.1E-08 1.4E-12 76.8 4.8 68 141-208 56-139 (223)
93 2ozv_A Hypothetical protein AT 98.6 1.4E-07 4.8E-12 76.0 8.0 68 141-208 34-121 (260)
94 2p7i_A Hypothetical protein; p 98.6 1.1E-07 3.8E-12 74.9 7.2 74 132-208 32-109 (250)
95 1wzn_A SAM-dependent methyltra 98.6 2.1E-07 7.1E-12 74.0 8.8 65 142-208 40-111 (252)
96 1jg1_A PIMT;, protein-L-isoasp 98.6 1.6E-07 5.4E-12 74.3 7.9 75 131-208 81-164 (235)
97 3cgg_A SAM-dependent methyltra 98.6 2E-07 7E-12 70.6 8.3 65 142-208 45-113 (195)
98 1xtp_A LMAJ004091AAA; SGPP, st 98.6 1.4E-07 4.9E-12 74.8 7.7 75 131-208 83-164 (254)
99 3mti_A RRNA methylase; SAM-dep 98.6 1.9E-07 6.4E-12 70.8 8.0 66 141-208 20-95 (185)
100 2pjd_A Ribosomal RNA small sub 98.6 1.3E-07 4.3E-12 79.3 7.5 76 131-208 186-267 (343)
101 3h2b_A SAM-dependent methyltra 98.6 8.5E-08 2.9E-12 73.8 6.0 63 144-208 42-108 (203)
102 3u81_A Catechol O-methyltransf 98.6 9.9E-08 3.4E-12 74.8 6.3 67 142-208 57-140 (221)
103 3lbf_A Protein-L-isoaspartate 98.6 2.8E-07 9.7E-12 71.2 8.9 74 131-208 67-149 (210)
104 2pwy_A TRNA (adenine-N(1)-)-me 98.5 2.8E-07 9.7E-12 73.4 9.0 76 131-208 86-172 (258)
105 3m33_A Uncharacterized protein 98.5 1.4E-07 4.8E-12 74.1 7.0 65 142-208 47-117 (226)
106 2fyt_A Protein arginine N-meth 98.5 3.8E-07 1.3E-11 76.4 9.9 75 131-208 54-137 (340)
107 2yxe_A Protein-L-isoaspartate 98.5 2.9E-07 9.9E-12 71.5 8.6 75 132-208 68-152 (215)
108 3q7e_A Protein arginine N-meth 98.5 2.1E-07 7.3E-12 78.2 8.3 67 141-208 64-139 (349)
109 2xvm_A Tellurite resistance pr 98.5 3.4E-07 1.2E-11 69.8 8.8 74 131-208 22-103 (199)
110 2gb4_A Thiopurine S-methyltran 98.5 1E-07 3.5E-12 76.7 6.1 64 143-208 68-158 (252)
111 1xdz_A Methyltransferase GIDB; 98.5 1E-07 3.5E-12 75.7 6.0 67 142-208 69-147 (240)
112 1p91_A Ribosomal RNA large sub 98.5 1.8E-07 6.3E-12 75.1 7.5 67 142-208 84-154 (269)
113 3lpm_A Putative methyltransfer 98.5 1.3E-07 4.6E-12 75.9 6.7 67 141-208 46-125 (259)
114 3eey_A Putative rRNA methylase 98.5 1.2E-07 3.9E-12 72.7 6.0 68 141-208 20-99 (197)
115 1m6y_A S-adenosyl-methyltransf 98.5 1.7E-07 5.7E-12 77.4 7.3 76 131-208 16-104 (301)
116 3tr6_A O-methyltransferase; ce 98.5 7.5E-08 2.6E-12 75.4 4.9 68 141-208 62-146 (225)
117 3g89_A Ribosomal RNA small sub 98.5 1.1E-07 3.6E-12 76.4 5.7 67 142-208 79-157 (249)
118 1zq9_A Probable dimethyladenos 98.5 3E-07 1E-11 75.2 8.5 75 130-208 17-99 (285)
119 4htf_A S-adenosylmethionine-de 98.5 2E-07 6.8E-12 75.6 7.4 64 143-208 68-142 (285)
120 4fsd_A Arsenic methyltransfera 98.5 2.4E-07 8.4E-12 78.7 8.2 67 142-208 82-172 (383)
121 3orh_A Guanidinoacetate N-meth 98.5 5.1E-08 1.7E-12 77.5 3.7 65 142-207 59-133 (236)
122 1ne2_A Hypothetical protein TA 98.5 1.8E-07 6.2E-12 71.9 6.7 65 142-208 50-116 (200)
123 2vdv_E TRNA (guanine-N(7)-)-me 98.5 2.7E-07 9.1E-12 73.6 7.8 58 142-199 48-119 (246)
124 2y1w_A Histone-arginine methyl 98.5 5E-07 1.7E-11 75.9 9.8 75 131-208 40-122 (348)
125 2fk8_A Methoxy mycolic acid sy 98.5 5.2E-07 1.8E-11 74.4 9.6 74 131-208 80-161 (318)
126 3dli_A Methyltransferase; PSI- 98.5 3E-07 1E-11 72.7 7.8 63 141-208 39-107 (240)
127 2esr_A Methyltransferase; stru 98.5 1.4E-07 4.9E-12 71.0 5.5 66 142-208 30-106 (177)
128 3dr5_A Putative O-methyltransf 98.5 2.4E-07 8.3E-12 72.9 7.0 64 145-208 58-135 (221)
129 3adn_A Spermidine synthase; am 98.5 1.4E-07 4.7E-12 77.6 5.7 67 142-208 82-163 (294)
130 1y8c_A S-adenosylmethionine-de 98.5 3E-07 1E-11 72.4 7.4 64 143-208 37-107 (246)
131 3ofk_A Nodulation protein S; N 98.5 3.3E-07 1.1E-11 71.1 7.5 66 141-208 49-120 (216)
132 1nt2_A Fibrillarin-like PRE-rR 98.5 3.9E-07 1.3E-11 71.1 7.9 67 141-208 55-132 (210)
133 3i9f_A Putative type 11 methyl 98.5 6.5E-08 2.2E-12 72.3 3.3 70 133-208 9-81 (170)
134 3ggd_A SAM-dependent methyltra 98.5 2.9E-07 9.8E-12 72.9 7.1 66 141-208 54-130 (245)
135 3gru_A Dimethyladenosine trans 98.5 5.3E-07 1.8E-11 74.2 8.9 75 130-208 39-120 (295)
136 3m70_A Tellurite resistance pr 98.5 4.7E-07 1.6E-11 73.4 8.6 74 131-208 110-190 (286)
137 1g6q_1 HnRNP arginine N-methyl 98.5 5.4E-07 1.8E-11 75.1 9.0 67 141-208 36-111 (328)
138 3d2l_A SAM-dependent methyltra 98.5 3.2E-07 1.1E-11 72.3 7.1 64 142-208 32-102 (243)
139 1iy9_A Spermidine synthase; ro 98.5 2.1E-07 7E-12 75.8 6.1 67 142-208 74-154 (275)
140 2fhp_A Methylase, putative; al 98.5 1.9E-07 6.4E-12 70.6 5.5 66 142-208 43-122 (187)
141 2frn_A Hypothetical protein PH 98.5 2.7E-07 9.2E-12 75.1 6.8 66 142-208 124-198 (278)
142 1vbf_A 231AA long hypothetical 98.5 6.6E-07 2.3E-11 70.1 8.9 74 131-208 60-140 (231)
143 3lcc_A Putative methyl chlorid 98.5 1.8E-07 6E-12 73.7 5.5 63 144-208 67-138 (235)
144 3r3h_A O-methyltransferase, SA 98.5 7.8E-08 2.7E-12 76.8 3.4 67 142-208 59-142 (242)
145 3p9n_A Possible methyltransfer 98.4 5.2E-07 1.8E-11 68.8 7.7 65 143-208 44-119 (189)
146 3tma_A Methyltransferase; thum 98.4 3.9E-07 1.3E-11 76.5 7.7 76 131-208 193-278 (354)
147 1i9g_A Hypothetical protein RV 98.4 6.3E-07 2.2E-11 72.4 8.5 76 131-208 89-177 (280)
148 3frh_A 16S rRNA methylase; met 98.4 6.4E-07 2.2E-11 71.4 8.0 64 142-208 104-174 (253)
149 3htx_A HEN1; HEN1, small RNA m 98.4 5.9E-07 2E-11 82.7 8.7 67 142-208 720-802 (950)
150 3r0q_C Probable protein argini 98.4 6.2E-07 2.1E-11 76.1 8.3 67 141-208 61-135 (376)
151 2hnk_A SAM-dependent O-methylt 98.4 1.9E-07 6.4E-12 74.0 4.8 58 141-198 58-123 (239)
152 2plw_A Ribosomal RNA methyltra 98.4 6.5E-07 2.2E-11 68.6 7.7 61 133-199 13-75 (201)
153 1zx0_A Guanidinoacetate N-meth 98.4 1.6E-07 5.3E-12 74.3 4.2 66 142-208 59-134 (236)
154 1g8a_A Fibrillarin-like PRE-rR 98.4 7E-07 2.4E-11 69.9 8.0 68 141-208 71-149 (227)
155 1ws6_A Methyltransferase; stru 98.4 1.7E-07 5.9E-12 69.7 4.2 64 143-208 41-116 (171)
156 1sui_A Caffeoyl-COA O-methyltr 98.4 2.3E-07 7.8E-12 74.3 5.2 68 141-208 77-162 (247)
157 2b25_A Hypothetical protein; s 98.4 1E-06 3.5E-11 73.3 9.4 76 131-208 95-193 (336)
158 4hc4_A Protein arginine N-meth 98.4 7E-07 2.4E-11 75.8 8.3 64 143-207 83-154 (376)
159 2yvl_A TRMI protein, hypotheti 98.4 1.4E-06 4.9E-11 68.8 9.7 73 132-208 82-164 (248)
160 1dl5_A Protein-L-isoaspartate 98.4 8.5E-07 2.9E-11 73.4 8.6 76 131-208 65-150 (317)
161 1wy7_A Hypothetical protein PH 98.4 6.9E-07 2.3E-11 68.9 7.4 64 143-208 49-118 (207)
162 3sm3_A SAM-dependent methyltra 98.4 8.8E-07 3E-11 69.2 8.0 66 141-208 28-107 (235)
163 3fut_A Dimethyladenosine trans 98.4 8E-07 2.8E-11 72.2 7.9 72 131-207 37-115 (271)
164 3c3p_A Methyltransferase; NP_9 98.4 1.8E-07 6.1E-12 72.6 3.9 67 142-208 55-132 (210)
165 3thr_A Glycine N-methyltransfe 98.4 2.3E-07 7.8E-12 75.4 4.6 75 130-208 46-136 (293)
166 2avd_A Catechol-O-methyltransf 98.4 2.8E-07 9.7E-12 72.2 5.0 68 141-208 67-151 (229)
167 2h1r_A Dimethyladenosine trans 98.4 4.9E-07 1.7E-11 74.4 6.6 75 130-208 31-112 (299)
168 3p2e_A 16S rRNA methylase; met 98.4 6.9E-07 2.4E-11 70.5 7.2 57 142-198 23-89 (225)
169 2pbf_A Protein-L-isoaspartate 98.4 9E-07 3.1E-11 69.3 7.8 68 141-208 78-168 (227)
170 1u2z_A Histone-lysine N-methyl 98.4 1.1E-06 3.8E-11 75.8 9.0 75 132-208 233-329 (433)
171 1l3i_A Precorrin-6Y methyltran 98.4 4.8E-07 1.6E-11 68.3 6.0 72 133-208 25-106 (192)
172 3evz_A Methyltransferase; NYSG 98.4 1E-06 3.5E-11 69.0 8.0 67 141-208 53-129 (230)
173 1o9g_A RRNA methyltransferase; 98.4 3.9E-07 1.3E-11 72.6 5.6 42 143-184 51-95 (250)
174 2ipx_A RRNA 2'-O-methyltransfe 98.4 7.1E-07 2.4E-11 70.3 7.1 67 141-208 75-153 (233)
175 2fpo_A Methylase YHHF; structu 98.4 6E-07 2E-11 69.5 6.4 65 143-208 54-128 (202)
176 1qam_A ERMC' methyltransferase 98.4 1.1E-06 3.9E-11 70.1 8.2 68 130-201 19-91 (244)
177 3cc8_A Putative methyltransfer 98.4 9.2E-07 3.1E-11 68.7 7.5 84 118-208 10-99 (230)
178 3a27_A TYW2, uncharacterized p 98.4 6.4E-07 2.2E-11 72.7 6.8 68 141-208 117-192 (272)
179 3bgv_A MRNA CAP guanine-N7 met 98.4 2E-06 6.7E-11 70.8 9.8 90 115-208 9-120 (313)
180 3gdh_A Trimethylguanosine synt 98.4 2.6E-07 9E-12 73.0 4.3 64 143-208 78-150 (241)
181 3lcv_B Sisomicin-gentamicin re 98.4 4.8E-07 1.6E-11 72.9 5.7 67 142-208 131-204 (281)
182 2pt6_A Spermidine synthase; tr 98.4 3.3E-07 1.1E-11 76.3 5.0 67 142-208 115-195 (321)
183 3e23_A Uncharacterized protein 98.3 6.1E-07 2.1E-11 69.4 6.0 65 141-208 41-108 (211)
184 1inl_A Spermidine synthase; be 98.3 4.3E-07 1.5E-11 74.7 5.3 66 143-208 90-169 (296)
185 3c3y_A Pfomt, O-methyltransfer 98.3 4.3E-07 1.5E-11 72.1 5.1 68 141-208 68-153 (237)
186 2nxc_A L11 mtase, ribosomal pr 98.3 5.5E-07 1.9E-11 72.3 5.7 65 142-208 119-190 (254)
187 3bwc_A Spermidine synthase; SA 98.3 5.1E-07 1.8E-11 74.5 5.6 67 142-208 94-175 (304)
188 3tm4_A TRNA (guanine N2-)-meth 98.3 5.2E-07 1.8E-11 76.5 5.8 67 142-208 216-292 (373)
189 2kw5_A SLR1183 protein; struct 98.3 1.1E-06 3.9E-11 67.3 7.2 61 146-208 32-100 (202)
190 1ri5_A MRNA capping enzyme; me 98.3 2.1E-06 7.2E-11 69.5 9.1 66 142-208 63-139 (298)
191 2ift_A Putative methylase HI07 98.3 5.1E-07 1.7E-11 69.8 5.1 65 143-208 53-131 (201)
192 1xj5_A Spermidine synthase 1; 98.3 4.6E-07 1.6E-11 75.8 5.2 67 142-208 119-200 (334)
193 1i1n_A Protein-L-isoaspartate 98.3 1.6E-06 5.6E-11 67.7 8.1 68 141-208 75-157 (226)
194 2o07_A Spermidine synthase; st 98.3 4.7E-07 1.6E-11 74.8 5.1 67 142-208 94-174 (304)
195 3e8s_A Putative SAM dependent 98.3 1.6E-06 5.4E-11 67.3 7.8 72 132-208 43-122 (227)
196 3uzu_A Ribosomal RNA small sub 98.3 4.4E-07 1.5E-11 74.1 4.7 70 131-202 32-106 (279)
197 2ex4_A Adrenal gland protein A 98.3 5.8E-07 2E-11 71.1 5.2 65 143-208 79-152 (241)
198 1r18_A Protein-L-isoaspartate( 98.3 8E-07 2.7E-11 69.7 5.8 68 141-208 82-169 (227)
199 2i7c_A Spermidine synthase; tr 98.3 5.7E-07 2E-11 73.4 5.0 67 142-208 77-157 (283)
200 3cbg_A O-methyltransferase; cy 98.3 4.8E-07 1.6E-11 71.5 4.1 67 142-208 71-154 (232)
201 2gs9_A Hypothetical protein TT 98.3 1.7E-06 5.7E-11 66.8 7.0 61 143-208 36-101 (211)
202 1uir_A Polyamine aminopropyltr 98.3 5.8E-07 2E-11 74.5 4.5 67 142-208 76-157 (314)
203 2b2c_A Spermidine synthase; be 98.3 6E-07 2E-11 74.5 4.6 67 142-208 107-187 (314)
204 3k0b_A Predicted N6-adenine-sp 98.3 2.3E-06 7.8E-11 73.1 8.2 76 131-208 191-313 (393)
205 3iv6_A Putative Zn-dependent a 98.3 1.8E-06 6.2E-11 69.8 7.1 51 130-184 34-85 (261)
206 2avn_A Ubiquinone/menaquinone 98.3 2.9E-06 1E-10 67.9 8.2 64 142-208 53-120 (260)
207 3ldu_A Putative methylase; str 98.3 2E-06 6.7E-11 73.3 7.5 76 131-208 185-307 (385)
208 3dou_A Ribosomal RNA large sub 98.3 2.3E-06 7.9E-11 65.8 7.3 61 131-199 14-74 (191)
209 1af7_A Chemotaxis receptor met 98.2 1.6E-06 5.6E-11 70.5 6.5 67 143-209 105-220 (274)
210 2ih2_A Modification methylase 98.2 2.1E-06 7.3E-11 73.3 7.5 73 130-208 28-104 (421)
211 1mjf_A Spermidine synthase; sp 98.2 6.6E-07 2.3E-11 73.0 4.1 66 142-208 74-158 (281)
212 1ej0_A FTSJ; methyltransferase 98.2 2.6E-06 8.7E-11 63.2 7.0 62 142-208 21-94 (180)
213 2p8j_A S-adenosylmethionine-de 98.2 1.6E-06 5.6E-11 66.6 5.9 66 142-208 22-95 (209)
214 2cmg_A Spermidine synthase; tr 98.2 1.9E-06 6.4E-11 69.7 6.3 65 142-208 71-145 (262)
215 3ftd_A Dimethyladenosine trans 98.2 2.3E-06 7.9E-11 68.6 6.7 70 130-202 20-92 (249)
216 3ldg_A Putative uncharacterize 98.2 3.9E-06 1.3E-10 71.5 8.5 76 131-208 184-306 (384)
217 1uwv_A 23S rRNA (uracil-5-)-me 98.2 4E-06 1.4E-10 72.4 8.7 66 141-208 284-362 (433)
218 3tqs_A Ribosomal RNA small sub 98.2 2.3E-06 7.8E-11 68.9 6.4 65 130-198 18-86 (255)
219 1vlm_A SAM-dependent methyltra 98.2 4E-06 1.4E-10 65.3 7.4 57 144-208 48-108 (219)
220 3dmg_A Probable ribosomal RNA 98.2 6.3E-06 2.1E-10 70.1 8.6 64 143-208 233-304 (381)
221 1ixk_A Methyltransferase; open 98.1 2.7E-06 9.3E-11 70.4 6.0 68 141-208 116-193 (315)
222 2nyu_A Putative ribosomal RNA 98.1 8.1E-06 2.8E-10 62.1 7.5 63 141-208 20-103 (196)
223 4azs_A Methyltransferase WBDD; 98.1 4.6E-06 1.6E-10 74.5 6.5 66 141-208 64-140 (569)
224 4df3_A Fibrillarin-like rRNA/T 98.1 1.2E-05 4.1E-10 63.9 7.9 68 141-208 75-153 (233)
225 1qyr_A KSGA, high level kasuga 98.1 4.5E-06 1.6E-10 67.0 5.5 68 130-201 10-82 (252)
226 3ajd_A Putative methyltransfer 98.0 2.6E-06 9E-11 69.0 3.7 68 141-208 81-162 (274)
227 2r6z_A UPF0341 protein in RSP 98.0 2.8E-06 9.7E-11 68.5 3.7 66 141-208 81-167 (258)
228 3k6r_A Putative transferase PH 98.0 8.1E-06 2.8E-10 66.5 6.3 67 141-208 123-198 (278)
229 1yub_A Ermam, rRNA methyltrans 98.0 2.3E-06 8E-11 68.1 3.0 68 130-201 18-90 (245)
230 2oxt_A Nucleoside-2'-O-methylt 98.0 7.8E-06 2.7E-10 66.1 6.1 65 141-208 72-146 (265)
231 3bzb_A Uncharacterized protein 98.0 2.2E-05 7.4E-10 63.8 8.7 66 142-208 78-169 (281)
232 3id6_C Fibrillarin-like rRNA/T 98.0 2.9E-05 1E-09 61.5 9.2 76 132-208 64-152 (232)
233 2igt_A SAM dependent methyltra 98.0 5.8E-06 2E-10 69.0 5.1 64 143-208 153-231 (332)
234 2i62_A Nicotinamide N-methyltr 98.0 2.6E-06 9E-11 67.8 2.9 65 143-208 56-163 (265)
235 2wa2_A Non-structural protein 98.0 7.6E-06 2.6E-10 66.6 5.6 64 141-208 80-154 (276)
236 2jjq_A Uncharacterized RNA met 98.0 3.3E-05 1.1E-09 66.6 9.8 64 142-208 289-359 (425)
237 3o4f_A Spermidine synthase; am 98.0 2.2E-05 7.4E-10 64.4 7.8 68 141-208 81-163 (294)
238 2yx1_A Hypothetical protein MJ 97.9 1.3E-05 4.5E-10 66.9 6.3 64 142-208 194-264 (336)
239 3opn_A Putative hemolysin; str 97.9 1.5E-05 5.1E-10 63.2 6.2 55 132-188 27-82 (232)
240 2yxl_A PH0851 protein, 450AA l 97.9 1.8E-05 6.3E-10 68.6 7.1 68 141-208 257-336 (450)
241 2zfu_A Nucleomethylin, cerebra 97.9 9.3E-06 3.2E-10 62.8 4.7 61 133-208 58-121 (215)
242 3giw_A Protein of unknown func 97.9 4.6E-05 1.6E-09 61.9 8.7 56 143-198 78-142 (277)
243 2qfm_A Spermine synthase; sper 97.9 1.3E-05 4.4E-10 67.5 5.1 66 142-208 187-273 (364)
244 2g72_A Phenylethanolamine N-me 97.9 9.9E-06 3.4E-10 65.7 4.2 41 143-184 71-112 (289)
245 2b78_A Hypothetical protein SM 97.8 9.3E-06 3.2E-10 69.1 4.0 66 142-208 211-291 (385)
246 3sso_A Methyltransferase; macr 97.8 1.9E-05 6.4E-10 67.4 5.6 62 143-208 216-294 (419)
247 2f8l_A Hypothetical protein LM 97.8 1.8E-05 6.1E-10 66.1 5.4 66 143-208 130-207 (344)
248 2p41_A Type II methyltransfera 97.8 1.6E-05 5.4E-10 65.6 4.9 65 141-208 80-154 (305)
249 2vdw_A Vaccinia virus capping 97.8 2.7E-05 9.3E-10 64.0 5.8 64 143-207 48-134 (302)
250 1wg8_A Predicted S-adenosylmet 97.8 7.9E-05 2.7E-09 60.5 8.2 75 130-208 11-95 (285)
251 2a14_A Indolethylamine N-methy 97.8 7.7E-06 2.6E-10 65.7 1.9 40 143-183 55-95 (263)
252 1sqg_A SUN protein, FMU protei 97.7 6.7E-05 2.3E-09 64.6 7.6 68 141-208 244-321 (429)
253 2as0_A Hypothetical protein PH 97.7 1.6E-05 5.5E-10 67.7 3.4 65 143-208 217-295 (396)
254 3c0k_A UPF0064 protein YCCW; P 97.7 1.6E-05 5.6E-10 67.7 3.1 66 142-208 219-299 (396)
255 2k4m_A TR8_protein, UPF0146 pr 97.7 6.7E-05 2.3E-09 55.0 5.8 55 142-207 34-94 (153)
256 2oyr_A UPF0341 protein YHIQ; a 97.7 3.7E-05 1.3E-09 61.9 5.0 74 131-208 76-170 (258)
257 3ll7_A Putative methyltransfer 97.7 2.7E-05 9.4E-10 66.7 4.2 64 143-208 93-169 (410)
258 4gqb_A Protein arginine N-meth 97.7 4.9E-05 1.7E-09 68.4 6.0 95 106-207 325-433 (637)
259 3v97_A Ribosomal RNA large sub 97.7 9.4E-05 3.2E-09 67.6 7.6 75 132-208 181-309 (703)
260 3bt7_A TRNA (uracil-5-)-methyl 97.6 5.5E-05 1.9E-09 63.9 5.4 53 144-198 214-272 (369)
261 2frx_A Hypothetical protein YE 97.6 8.2E-05 2.8E-09 65.1 6.5 66 143-208 117-193 (479)
262 3m6w_A RRNA methylase; rRNA me 97.6 2.8E-05 9.5E-10 67.7 3.4 67 141-208 99-176 (464)
263 3hp7_A Hemolysin, putative; st 97.6 0.00012 4.1E-09 59.9 6.9 74 132-208 75-157 (291)
264 1wxx_A TT1595, hypothetical pr 97.6 3.1E-05 1.1E-09 65.7 2.9 64 143-208 209-285 (382)
265 4dmg_A Putative uncharacterize 97.6 7.7E-05 2.6E-09 63.6 5.4 64 143-208 214-286 (393)
266 2aot_A HMT, histamine N-methyl 97.6 0.00013 4.3E-09 59.3 6.4 66 143-208 52-141 (292)
267 3v97_A Ribosomal RNA large sub 97.5 9.5E-05 3.2E-09 67.6 6.1 65 143-208 539-615 (703)
268 2b9e_A NOL1/NOP2/SUN domain fa 97.5 0.00014 4.8E-09 60.0 6.5 68 141-208 100-180 (309)
269 3m4x_A NOL1/NOP2/SUN family pr 97.5 3.9E-05 1.3E-09 66.7 3.0 68 141-208 103-181 (456)
270 2okc_A Type I restriction enzy 97.5 0.00015 5E-09 62.7 6.3 66 143-208 171-259 (445)
271 2dul_A N(2),N(2)-dimethylguano 97.5 0.00012 4.2E-09 62.1 5.5 66 143-208 47-137 (378)
272 4e2x_A TCAB9; kijanose, tetron 97.4 0.00015 5.1E-09 61.8 5.7 52 129-184 95-147 (416)
273 4auk_A Ribosomal RNA large sub 97.3 0.00047 1.6E-08 58.1 7.1 64 141-207 209-275 (375)
274 3axs_A Probable N(2),N(2)-dime 97.3 0.00026 8.7E-09 60.4 5.0 66 143-208 52-131 (392)
275 2xyq_A Putative 2'-O-methyl tr 97.1 0.00046 1.6E-08 56.4 5.0 59 141-208 61-129 (290)
276 3tka_A Ribosomal RNA small sub 96.9 0.0024 8.2E-08 53.1 7.7 77 130-208 46-134 (347)
277 3c6k_A Spermine synthase; sper 96.8 0.0011 3.8E-08 56.0 4.8 65 143-208 205-290 (381)
278 3ua3_A Protein arginine N-meth 96.8 0.0012 4E-08 60.0 4.8 65 143-207 409-500 (745)
279 3p8z_A Mtase, non-structural p 96.7 0.003 1E-07 49.9 5.9 76 130-207 67-149 (267)
280 2ar0_A M.ecoki, type I restric 96.3 0.0061 2.1E-07 54.0 6.5 66 143-208 169-267 (541)
281 3khk_A Type I restriction-modi 96.2 0.0033 1.1E-07 55.7 4.2 65 144-208 245-335 (544)
282 1i4w_A Mitochondrial replicati 96.2 0.013 4.5E-07 49.1 7.2 55 144-198 59-116 (353)
283 3lkd_A Type I restriction-modi 96.1 0.011 3.8E-07 52.4 6.8 66 143-208 221-303 (542)
284 3s1s_A Restriction endonucleas 96.0 0.011 3.7E-07 54.6 6.5 67 142-208 320-405 (878)
285 3evf_A RNA-directed RNA polyme 96.0 0.015 5.1E-07 46.9 6.5 35 141-175 72-106 (277)
286 2px2_A Genome polyprotein [con 95.9 0.0095 3.2E-07 47.6 4.9 74 130-207 62-144 (269)
287 3lkz_A Non-structural protein 95.9 0.0091 3.1E-07 48.6 4.8 77 130-208 83-166 (321)
288 3b5i_A S-adenosyl-L-methionine 95.8 0.03 1E-06 47.3 7.8 64 144-207 53-155 (374)
289 3gcz_A Polyprotein; flavivirus 95.7 0.01 3.6E-07 47.9 4.4 45 129-175 78-122 (282)
290 3cvo_A Methyltransferase-like 95.6 0.048 1.7E-06 42.0 7.7 54 141-197 28-90 (202)
291 1rjd_A PPM1P, carboxy methyl t 95.3 0.06 2E-06 44.7 7.8 57 142-198 96-178 (334)
292 2qy6_A UPF0209 protein YFCK; s 95.3 0.011 3.7E-07 47.4 3.2 33 143-175 60-104 (257)
293 2zig_A TTHA0409, putative modi 95.2 0.029 9.9E-07 45.6 5.7 40 143-184 235-275 (297)
294 2ld4_A Anamorsin; methyltransf 94.6 0.017 5.7E-07 42.7 2.4 52 141-208 10-69 (176)
295 2efj_A 3,7-dimethylxanthine me 94.5 0.07 2.4E-06 45.1 6.4 33 144-176 53-102 (384)
296 1zkd_A DUF185; NESG, RPR58, st 93.5 0.36 1.2E-05 40.8 8.8 64 112-181 55-125 (387)
297 3eld_A Methyltransferase; flav 93.3 0.083 2.8E-06 43.0 4.3 37 140-176 78-114 (300)
298 2wk1_A NOVP; transferase, O-me 93.2 0.098 3.4E-06 42.3 4.7 66 143-208 106-215 (282)
299 1m6e_X S-adenosyl-L-methionnin 93.0 0.13 4.3E-06 43.2 5.2 66 142-207 50-144 (359)
300 1g60_A Adenine-specific methyl 90.0 0.55 1.9E-05 37.1 5.8 40 142-183 211-251 (260)
301 2uyo_A Hypothetical protein ML 89.1 1.5 5E-05 35.8 7.8 55 142-198 101-164 (310)
302 2oo3_A Protein involved in cat 87.2 0.66 2.3E-05 37.5 4.4 63 144-208 92-165 (283)
303 2py6_A Methyltransferase FKBM; 87.2 0.88 3E-05 38.6 5.5 40 142-181 225-267 (409)
304 3iht_A S-adenosyl-L-methionine 86.9 4.4 0.00015 29.8 8.2 58 114-175 15-72 (174)
305 3ufb_A Type I restriction-modi 86.1 1.6 5.5E-05 38.3 6.7 66 143-208 217-308 (530)
306 4fzv_A Putative methyltransfer 85.7 1.3 4.5E-05 37.0 5.7 68 141-208 146-229 (359)
307 3b73_A PHIH1 repressor-like pr 84.8 0.54 1.9E-05 32.4 2.5 45 38-83 16-78 (111)
308 1y0u_A Arsenical resistance op 84.7 0.3 1E-05 32.3 1.1 47 30-79 26-87 (96)
309 4f3n_A Uncharacterized ACR, CO 83.3 0.97 3.3E-05 38.7 3.9 61 110-179 113-178 (432)
310 2heo_A Z-DNA binding protein 1 82.4 0.33 1.1E-05 30.1 0.5 39 37-75 12-66 (67)
311 3ech_A MEXR, multidrug resista 81.9 4.4 0.00015 28.1 6.5 48 35-83 37-106 (142)
312 3r24_A NSP16, 2'-O-methyl tran 81.8 1.3 4.6E-05 36.1 3.9 59 141-207 107-174 (344)
313 3llv_A Exopolyphosphatase-rela 79.0 4 0.00014 28.3 5.5 61 144-208 6-76 (141)
314 3vrd_B FCCB subunit, flavocyto 78.1 2.2 7.5E-05 35.3 4.4 32 144-175 2-35 (401)
315 3fwz_A Inner membrane protein 78.0 6.7 0.00023 27.3 6.4 62 144-208 7-77 (140)
316 1g55_A DNA cytosine methyltran 75.8 2.7 9.2E-05 34.6 4.2 64 145-208 3-74 (343)
317 2g7u_A Transcriptional regulat 75.1 1 3.5E-05 35.5 1.4 44 38-81 17-75 (257)
318 3mq0_A Transcriptional repress 74.8 0.93 3.2E-05 36.2 1.1 41 38-78 33-89 (275)
319 1mkm_A ICLR transcriptional re 71.8 2 6.9E-05 33.5 2.4 41 38-78 11-67 (249)
320 3fm5_A Transcriptional regulat 71.1 13 0.00045 25.8 6.5 49 35-83 39-109 (150)
321 3r4k_A Transcriptional regulat 70.2 0.81 2.8E-05 36.2 -0.3 41 38-78 9-66 (260)
322 2ia2_A Putative transcriptiona 70.1 1.2 4E-05 35.4 0.6 41 38-78 24-79 (265)
323 1r7j_A Conserved hypothetical 68.4 3.2 0.00011 27.5 2.4 32 51-82 21-67 (95)
324 3mag_A VP39; methylated adenin 68.3 3.5 0.00012 33.4 3.0 33 143-175 60-96 (307)
325 2xrn_A HTH-type transcriptiona 67.4 1.8 6E-05 33.8 1.2 44 38-81 9-69 (241)
326 2g1u_A Hypothetical protein TM 66.2 25 0.00086 24.6 7.2 64 143-208 18-90 (155)
327 3jw4_A Transcriptional regulat 65.9 21 0.00073 24.6 6.7 47 37-83 43-112 (148)
328 3hyw_A Sulfide-quinone reducta 65.5 6.3 0.00022 33.1 4.3 31 145-175 3-35 (430)
329 3g7u_A Cytosine-specific methy 65.1 17 0.0006 30.2 6.9 62 145-208 3-77 (376)
330 3iei_A Leucine carboxyl methyl 64.3 36 0.0012 27.9 8.5 56 143-198 90-174 (334)
331 3nrv_A Putative transcriptiona 64.1 4.4 0.00015 28.2 2.7 48 35-83 40-109 (148)
332 2o0y_A Transcriptional regulat 61.8 3.4 0.00011 32.5 1.8 41 38-78 26-82 (260)
333 1lss_A TRK system potassium up 61.5 23 0.00079 23.8 6.1 61 145-208 5-75 (140)
334 2fa5_A Transcriptional regulat 61.0 6 0.0002 28.0 2.9 47 36-83 50-118 (162)
335 2c7p_A Modification methylase 60.4 10 0.00034 31.0 4.5 61 144-208 11-77 (327)
336 3dfz_A SIRC, precorrin-2 dehyd 60.3 28 0.00097 26.7 6.9 62 143-208 30-97 (223)
337 3c85_A Putative glutathione-re 59.9 17 0.00059 26.2 5.4 61 144-208 39-111 (183)
338 1qbj_A Protein (double-strande 59.2 5.8 0.0002 25.5 2.3 47 36-82 11-77 (81)
339 2x4h_A Hypothetical protein SS 59.1 4.9 0.00017 27.8 2.2 35 48-82 29-78 (139)
340 1tbx_A ORF F-93, hypothetical 58.7 3.5 0.00012 26.9 1.2 44 38-82 11-77 (99)
341 1id1_A Putative potassium chan 58.2 42 0.0014 23.3 7.2 62 145-208 4-77 (153)
342 2aef_A Calcium-gated potassium 58.2 52 0.0018 24.7 8.1 61 143-208 8-77 (234)
343 3df8_A Possible HXLR family tr 57.6 4.6 0.00016 27.3 1.7 67 15-82 16-93 (111)
344 3cdh_A Transcriptional regulat 56.9 6.1 0.00021 27.7 2.4 46 37-83 45-112 (155)
345 1u2w_A CADC repressor, cadmium 56.9 4.8 0.00016 27.6 1.7 49 29-78 36-103 (122)
346 2vvp_A Ribose-5-phosphate isom 56.3 19 0.00065 26.4 4.9 54 143-196 60-114 (162)
347 2hr3_A Probable transcriptiona 56.0 7.1 0.00024 27.0 2.6 48 35-83 35-105 (147)
348 3he8_A Ribose-5-phosphate isom 55.9 20 0.00068 25.9 4.9 53 144-196 57-110 (149)
349 3fpz_A Thiazole biosynthetic e 55.6 16 0.00056 29.1 5.0 31 145-175 66-98 (326)
350 3ic5_A Putative saccharopine d 55.6 39 0.0013 21.8 6.9 60 145-208 6-75 (118)
351 3g3z_A NMB1585, transcriptiona 55.4 6.2 0.00021 27.4 2.2 47 36-83 32-100 (145)
352 2wte_A CSA3; antiviral protein 55.4 7 0.00024 30.6 2.6 46 36-82 153-215 (244)
353 3s5p_A Ribose 5-phosphate isom 55.1 20 0.00069 26.3 4.9 53 143-195 77-130 (166)
354 1o1x_A Ribose-5-phosphate isom 55.0 18 0.0006 26.3 4.5 54 143-196 68-122 (155)
355 2vvr_A Ribose-5-phosphate isom 54.5 17 0.00057 26.3 4.3 52 143-194 57-109 (149)
356 3l9w_A Glutathione-regulated p 54.1 26 0.0009 29.4 6.2 61 145-208 5-74 (413)
357 3pqk_A Biofilm growth-associat 53.8 9.2 0.00031 25.0 2.7 47 29-77 17-82 (102)
358 3sxp_A ADP-L-glycero-D-mannohe 53.7 15 0.00053 29.6 4.6 62 145-207 11-95 (362)
359 4eqs_A Coenzyme A disulfide re 53.4 14 0.00049 31.1 4.5 30 146-175 2-33 (437)
360 2f2e_A PA1607; transcription f 53.3 5.5 0.00019 28.4 1.6 55 17-82 15-90 (146)
361 1boo_A Protein (N-4 cytosine-s 53.3 26 0.00088 28.3 5.9 40 142-183 251-291 (323)
362 3l4b_C TRKA K+ channel protien 53.2 32 0.0011 25.6 6.1 60 146-208 2-71 (218)
363 3ph3_A Ribose-5-phosphate isom 53.0 18 0.00063 26.6 4.4 54 143-196 76-130 (169)
364 3k0l_A Repressor protein; heli 52.7 6.5 0.00022 28.0 1.9 47 36-83 47-115 (162)
365 3bro_A Transcriptional regulat 52.7 5.8 0.0002 27.2 1.6 46 37-82 36-104 (141)
366 3bj6_A Transcriptional regulat 52.5 5.4 0.00018 27.9 1.4 46 37-83 42-109 (152)
367 3ono_A Ribose/galactose isomer 52.3 21 0.00071 27.4 4.7 53 142-194 64-117 (214)
368 3bja_A Transcriptional regulat 52.1 4.6 0.00016 27.7 1.0 47 36-83 34-102 (139)
369 2pex_A Transcriptional regulat 52.0 6.1 0.00021 27.7 1.7 47 36-83 48-116 (153)
370 3h2s_A Putative NADH-flavin re 51.9 26 0.00089 25.8 5.4 58 147-207 3-67 (224)
371 3gvc_A Oxidoreductase, probabl 51.7 34 0.0011 26.7 6.2 54 144-198 29-86 (277)
372 3bpv_A Transcriptional regulat 51.5 5.5 0.00019 27.2 1.3 47 36-83 30-98 (138)
373 1bja_A Transcription regulator 51.3 8.6 0.0003 25.6 2.2 46 37-83 18-79 (95)
374 3c5y_A Ribose/galactose isomer 50.9 23 0.00078 27.5 4.8 52 143-194 82-134 (231)
375 1on2_A Transcriptional regulat 50.8 11 0.00036 26.2 2.8 34 49-82 21-70 (142)
376 3boq_A Transcriptional regulat 50.6 5.8 0.0002 28.0 1.4 47 37-83 49-117 (160)
377 2nnn_A Probable transcriptiona 50.3 4.6 0.00016 27.7 0.8 47 36-83 39-107 (140)
378 1xmk_A Double-stranded RNA-spe 49.8 12 0.0004 23.9 2.6 42 37-79 13-73 (79)
379 3k7p_A Ribose 5-phosphate isom 49.1 29 0.001 25.8 5.0 54 143-196 80-134 (179)
380 2ppw_A Conserved domain protei 49.1 20 0.00069 27.5 4.2 52 142-193 65-117 (216)
381 3bdd_A Regulatory protein MARR 49.0 6.4 0.00022 27.0 1.3 46 36-82 32-99 (142)
382 2qww_A Transcriptional regulat 48.4 8.5 0.00029 26.9 1.9 46 36-82 42-111 (154)
383 3ggo_A Prephenate dehydrogenas 48.3 40 0.0014 27.1 6.2 64 144-208 33-100 (314)
384 1ub9_A Hypothetical protein PH 48.3 6.5 0.00022 25.3 1.2 49 30-79 11-81 (100)
385 1jgs_A Multiple antibiotic res 48.3 5.9 0.0002 27.1 1.1 46 37-83 36-103 (138)
386 3ius_A Uncharacterized conserv 48.2 49 0.0017 25.3 6.7 59 145-207 6-68 (286)
387 2fbk_A Transcriptional regulat 47.9 8.8 0.0003 27.9 2.0 47 37-83 71-141 (181)
388 2fbh_A Transcriptional regulat 47.6 8.2 0.00028 26.6 1.8 46 37-83 39-107 (146)
389 3b1f_A Putative prephenate deh 47.5 44 0.0015 26.0 6.3 63 145-208 7-72 (290)
390 3jth_A Transcription activator 47.2 27 0.00094 22.3 4.3 49 28-78 16-83 (98)
391 3c4a_A Probable tryptophan hyd 47.0 19 0.00065 29.4 4.2 31 146-176 2-34 (381)
392 3kkj_A Amine oxidase, flavin-c 47.0 14 0.00048 27.2 3.1 30 146-175 4-33 (336)
393 4hbl_A Transcriptional regulat 46.9 6 0.00021 27.7 0.9 47 36-83 42-110 (149)
394 2hzt_A Putative HTH-type trans 46.9 6.1 0.00021 26.4 0.9 56 16-82 4-82 (107)
395 2bv6_A MGRA, HTH-type transcri 46.4 5 0.00017 27.7 0.4 47 36-83 38-106 (142)
396 2a61_A Transcriptional regulat 46.4 5.8 0.0002 27.4 0.8 47 36-83 34-102 (145)
397 3f6v_A Possible transcriptiona 46.4 4.6 0.00016 29.1 0.2 50 28-79 51-119 (151)
398 3sgw_A Ribose 5-phosphate isom 46.3 34 0.0012 25.6 5.0 51 145-195 90-141 (184)
399 3s2w_A Transcriptional regulat 46.2 5.7 0.00019 28.2 0.7 45 38-83 53-119 (159)
400 2oqg_A Possible transcriptiona 46.2 5.5 0.00019 26.5 0.6 43 34-78 20-81 (114)
401 4em8_A Ribose 5-phosphate isom 46.1 23 0.00079 25.5 3.9 50 146-195 65-115 (148)
402 3slg_A PBGP3 protein; structur 46.0 25 0.00086 28.3 4.8 52 144-197 24-79 (372)
403 3deu_A Transcriptional regulat 45.9 9.1 0.00031 27.5 1.8 49 35-83 53-123 (166)
404 1qgp_A Protein (double strande 45.8 6 0.00021 25.0 0.7 40 37-76 16-75 (77)
405 1m6i_A Programmed cell death p 45.8 20 0.00069 30.6 4.3 33 144-176 11-45 (493)
406 2rdp_A Putative transcriptiona 45.4 7.2 0.00024 27.1 1.1 46 37-83 44-111 (150)
407 3cjn_A Transcriptional regulat 45.2 6.6 0.00022 27.8 0.9 47 36-83 53-121 (162)
408 2hmt_A YUAA protein; RCK, KTN, 44.6 52 0.0018 22.0 5.7 61 144-208 6-76 (144)
409 1lj9_A Transcriptional regulat 44.5 7 0.00024 26.9 1.0 46 37-83 31-98 (144)
410 2dph_A Formaldehyde dismutase; 43.7 37 0.0013 28.0 5.5 45 141-185 183-229 (398)
411 3kzv_A Uncharacterized oxidore 43.7 48 0.0016 25.2 5.9 54 145-198 3-61 (254)
412 2bll_A Protein YFBG; decarboxy 43.7 37 0.0013 26.7 5.4 48 150-198 5-56 (345)
413 2zwa_A Leucine carboxyl methyl 43.2 50 0.0017 29.6 6.6 56 143-198 107-199 (695)
414 3hsr_A HTH-type transcriptiona 43.2 6.1 0.00021 27.3 0.5 47 36-83 37-105 (140)
415 3two_A Mannitol dehydrogenase; 43.1 57 0.002 26.2 6.5 44 141-185 174-219 (348)
416 3e6m_A MARR family transcripti 43.0 6.8 0.00023 27.8 0.7 46 37-83 55-122 (161)
417 4hb9_A Similarities with proba 43.0 19 0.00064 29.2 3.5 30 146-175 3-32 (412)
418 2eth_A Transcriptional regulat 42.9 8.4 0.00029 27.1 1.2 48 35-83 44-113 (154)
419 1z91_A Organic hydroperoxide r 42.6 6.6 0.00023 27.2 0.6 47 36-83 41-109 (147)
420 2gxg_A 146AA long hypothetical 42.5 11 0.00036 26.0 1.7 46 36-83 38-105 (146)
421 3cuo_A Uncharacterized HTH-typ 42.4 10 0.00034 24.3 1.4 47 31-78 20-85 (99)
422 3kp7_A Transcriptional regulat 42.4 59 0.002 22.3 5.8 45 37-83 40-108 (151)
423 3eco_A MEPR; mutlidrug efflux 42.3 8.9 0.0003 26.3 1.2 48 36-83 32-102 (139)
424 1yyv_A Putative transcriptiona 42.2 8.5 0.00029 26.8 1.1 66 15-82 24-103 (131)
425 4h0n_A DNMT2; SAH binding, tra 42.2 26 0.00089 28.6 4.2 64 145-208 4-75 (333)
426 1yo6_A Putative carbonyl reduc 42.1 52 0.0018 24.5 5.8 53 145-198 4-62 (250)
427 3e8x_A Putative NAD-dependent 42.0 43 0.0015 24.9 5.3 61 144-207 21-89 (236)
428 3iwa_A FAD-dependent pyridine 41.5 29 0.00098 29.3 4.5 32 145-176 4-37 (472)
429 3r6d_A NAD-dependent epimerase 41.2 36 0.0012 25.1 4.7 62 145-207 6-78 (221)
430 1s3j_A YUSO protein; structura 40.4 5.5 0.00019 27.9 -0.2 46 37-83 39-106 (155)
431 3oc4_A Oxidoreductase, pyridin 40.3 26 0.0009 29.4 4.1 31 145-175 3-35 (452)
432 1eg2_A Modification methylase 40.2 54 0.0019 26.4 5.8 41 142-184 241-285 (319)
433 2q7x_A UPF0052 protein SP_1565 40.0 22 0.00074 29.1 3.4 27 144-170 4-32 (326)
434 3qv2_A 5-cytosine DNA methyltr 40.0 21 0.00072 29.1 3.3 64 143-208 9-82 (327)
435 3f6o_A Probable transcriptiona 39.7 7.3 0.00025 26.4 0.4 48 29-78 12-78 (118)
436 1pl8_A Human sorbitol dehydrog 39.7 1.1E+02 0.0039 24.4 7.8 45 141-185 169-215 (356)
437 3e48_A Putative nucleoside-dip 39.0 61 0.0021 24.9 5.9 56 151-208 6-71 (289)
438 2qrv_A DNA (cytosine-5)-methyl 38.6 67 0.0023 25.6 6.0 67 142-208 14-89 (295)
439 3c4n_A Uncharacterized protein 38.5 28 0.00097 28.6 4.0 32 145-176 37-70 (405)
440 3ew7_A LMO0794 protein; Q8Y8U8 38.2 40 0.0014 24.5 4.5 57 147-207 3-66 (221)
441 3ics_A Coenzyme A-disulfide re 37.8 34 0.0012 29.8 4.5 33 143-175 35-69 (588)
442 2nyx_A Probable transcriptiona 37.8 8 0.00027 27.8 0.4 47 36-83 46-114 (168)
443 3tgn_A ADC operon repressor AD 37.6 21 0.00071 24.5 2.6 46 36-83 39-106 (146)
444 1z7u_A Hypothetical protein EF 37.2 10 0.00034 25.5 0.8 57 15-82 11-90 (112)
445 2fbi_A Probable transcriptiona 37.2 7 0.00024 26.8 -0.0 47 36-83 37-105 (142)
446 2y75_A HTH-type transcriptiona 37.0 17 0.00058 24.9 2.0 30 48-77 24-71 (129)
447 1ges_A Glutathione reductase; 36.8 33 0.0011 28.8 4.1 31 145-175 5-35 (450)
448 3lyl_A 3-oxoacyl-(acyl-carrier 36.4 1E+02 0.0036 22.9 6.7 54 144-198 5-65 (247)
449 2fxa_A Protease production reg 36.3 8.6 0.00029 28.9 0.3 46 37-83 50-117 (207)
450 1up7_A 6-phospho-beta-glucosid 36.2 44 0.0015 28.2 4.8 63 145-208 3-79 (417)
451 3lzw_A Ferredoxin--NADP reduct 36.1 27 0.00091 27.3 3.3 32 144-175 7-38 (332)
452 4gcm_A TRXR, thioredoxin reduc 36.1 27 0.00091 27.4 3.3 30 146-175 8-37 (312)
453 2e4g_A Tryptophan halogenase; 36.0 30 0.001 30.0 3.9 33 143-175 24-59 (550)
454 3hrs_A Metalloregulator SCAR; 35.8 26 0.00087 26.5 3.0 35 48-82 18-68 (214)
455 2h6e_A ADH-4, D-arabinose 1-de 35.7 39 0.0013 27.1 4.3 42 143-184 170-214 (344)
456 2p0y_A Hypothetical protein LP 35.6 21 0.00073 29.4 2.6 28 143-170 9-38 (341)
457 2jt1_A PEFI protein; solution 35.5 9.8 0.00034 24.1 0.5 19 40-58 9-32 (77)
458 2xdo_A TETX2 protein; tetracyc 35.3 45 0.0015 27.2 4.7 33 143-175 25-57 (398)
459 2cdu_A NADPH oxidase; flavoenz 35.2 39 0.0013 28.3 4.3 31 146-176 2-34 (452)
460 3sx6_A Sulfide-quinone reducta 35.1 31 0.0011 28.8 3.7 32 144-175 4-38 (437)
461 1f8f_A Benzyl alcohol dehydrog 35.1 57 0.0019 26.5 5.3 44 141-184 188-233 (371)
462 2pyx_A Tryptophan halogenase; 35.0 27 0.00092 30.0 3.4 33 144-176 7-51 (526)
463 2aqj_A Tryptophan halogenase, 34.9 30 0.001 29.8 3.7 32 144-175 5-39 (538)
464 2fsw_A PG_0823 protein; alpha- 34.5 11 0.00039 24.9 0.7 67 14-82 13-93 (107)
465 1u6z_A Exopolyphosphatase; alp 34.4 27 0.00091 30.3 3.2 16 143-158 137-152 (513)
466 2htj_A P fimbrial regulatory p 34.3 21 0.00072 22.2 2.0 19 39-58 4-22 (81)
467 4fk1_A Putative thioredoxin re 34.3 29 0.001 27.1 3.3 30 146-175 8-37 (304)
468 3oop_A LIN2960 protein; protei 34.3 19 0.00066 24.6 2.0 48 35-83 37-106 (143)
469 3u2r_A Regulatory protein MARR 34.2 8.7 0.0003 27.5 0.1 48 36-83 47-117 (168)
470 1kol_A Formaldehyde dehydrogen 34.1 58 0.002 26.7 5.2 45 141-185 183-229 (398)
471 3f3x_A Transcriptional regulat 34.0 11 0.00036 26.1 0.5 46 36-83 38-105 (144)
472 2i6t_A Ubiquitin-conjugating e 34.0 1.1E+02 0.0036 24.4 6.6 64 143-208 13-83 (303)
473 1wma_A Carbonyl reductase [NAD 33.9 1.1E+02 0.0037 23.0 6.5 54 144-198 4-65 (276)
474 3h28_A Sulfide-quinone reducta 33.9 32 0.0011 28.5 3.6 31 145-175 3-35 (430)
475 4a5n_A Uncharacterized HTH-typ 33.8 26 0.00088 24.5 2.5 67 15-82 15-94 (131)
476 3mdq_A Exopolyphosphatase; str 33.7 29 0.001 28.0 3.2 15 143-157 131-145 (315)
477 4g6h_A Rotenone-insensitive NA 33.4 34 0.0012 29.4 3.7 32 144-175 42-73 (502)
478 3h8l_A NADH oxidase; membrane 33.4 28 0.00095 28.7 3.1 31 145-175 2-35 (409)
479 1r1u_A CZRA, repressor protein 33.2 14 0.00046 24.4 0.9 47 30-78 21-86 (106)
480 3jv7_A ADH-A; dehydrogenase, n 33.1 51 0.0017 26.4 4.6 45 141-185 169-215 (345)
481 2vou_A 2,6-dihydroxypyridine h 32.9 39 0.0013 27.6 3.9 33 144-176 5-37 (397)
482 2b69_A UDP-glucuronate decarbo 32.8 98 0.0033 24.4 6.3 63 144-207 27-96 (343)
483 4e6p_A Probable sorbitol dehyd 32.8 72 0.0025 24.2 5.3 54 144-198 8-65 (259)
484 3ab1_A Ferredoxin--NADP reduct 32.6 32 0.0011 27.5 3.3 32 144-175 14-45 (360)
485 4g65_A TRK system potassium up 32.5 95 0.0033 26.3 6.4 74 132-207 223-305 (461)
486 3ntd_A FAD-dependent pyridine 32.5 44 0.0015 28.8 4.4 31 145-175 2-34 (565)
487 3dhn_A NAD-dependent epimerase 32.4 62 0.0021 23.7 4.7 60 145-207 5-72 (227)
488 3nix_A Flavoprotein/dehydrogen 32.0 42 0.0014 27.4 4.0 32 145-176 6-37 (421)
489 3n74_A 3-ketoacyl-(acyl-carrie 32.0 76 0.0026 24.0 5.3 53 144-198 9-66 (261)
490 2hqm_A GR, grase, glutathione 31.7 34 0.0012 29.0 3.4 31 145-175 12-42 (479)
491 1nhp_A NADH peroxidase; oxidor 31.7 47 0.0016 27.7 4.3 30 146-175 2-33 (447)
492 2zbw_A Thioredoxin reductase; 31.6 36 0.0012 26.7 3.4 31 145-175 6-36 (335)
493 2r9z_A Glutathione amide reduc 31.6 34 0.0012 28.8 3.4 31 145-175 5-35 (463)
494 3dqp_A Oxidoreductase YLBE; al 31.4 60 0.002 23.8 4.5 55 150-207 5-68 (219)
495 3s2e_A Zinc-containing alcohol 31.4 1E+02 0.0035 24.5 6.2 44 141-185 164-209 (340)
496 3e1t_A Halogenase; flavoprotei 31.2 43 0.0015 28.6 4.0 32 145-176 8-39 (512)
497 3o38_A Short chain dehydrogena 31.1 1.5E+02 0.005 22.4 6.8 53 144-198 22-84 (266)
498 2weu_A Tryptophan 5-halogenase 30.9 26 0.0009 29.8 2.6 32 145-176 3-37 (511)
499 1uuf_A YAHK, zinc-type alcohol 30.7 91 0.0031 25.3 5.8 43 141-184 192-236 (369)
500 3f8d_A Thioredoxin reductase ( 30.7 39 0.0013 26.2 3.4 31 145-175 16-46 (323)
No 1
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=100.00 E-value=7.1e-34 Score=241.20 Aligned_cols=194 Identities=21% Similarity=0.252 Sum_probs=165.1
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCC----CCCCcee
Q 046346 13 LEAQIHVWNHIFNFINSMTLKCSIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNN----DEEQGYV 73 (209)
Q Consensus 13 ~~~~~~l~~~~~g~~~~~~l~~a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e----~~~~~y~ 73 (209)
.++...|.+++.||+.+++|++|++|||||+|.+.++|+|++|||+ |++.|+++ ...+.|+
T Consensus 6 ~~~~~~L~~l~~Gf~~s~~L~aa~eLglfd~L~~~~~p~t~~eLA~~~g~~~~~l~rlLr~L~~~gll~~~~~~~~~~y~ 85 (353)
T 4a6d_A 6 DQAYRLLNDYANGFMVSQVLFAACELGVFDLLAEAPGPLDVAAVAAGVRASAHGTELLLDICVSLKLLKVETRGGKAFYR 85 (353)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHSSSCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHhcCCCCCCHHHHHHhhCcCHHHHHHHHHHHHHCCCEEEeccCccceee
Confidence 3778889999999999999999999999999987657999999999 67899842 3456899
Q ss_pred cCHhhh-hhhcCCCcc----------------cchhhhhhcCCCCCccc----------cccCCCcHHHHHHHHHHHhhh
Q 046346 74 LTNASK-LLLKDNPLS----------------QQLRSWFQNDDPTPFGT----------EYDGDEPKLNNFFNEAMASDA 126 (209)
Q Consensus 74 ~t~~s~-~l~~~~~~~----------------~~l~~~l~~~~~~~f~~----------~~~~~~~~~~~~f~~~m~~~~ 126 (209)
+|+.++ +|..+++.+ .+|.+++++++ ++|.. +++.++|+....|+++|...+
T Consensus 86 ~t~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~vr~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~aM~~~~ 164 (353)
T 4a6d_A 86 NTELSSDYLTTVSPTSQCSMLKYMGRTSYRCWGHLADAVREGR-NQYLETFGVPAEELFTAIYRSEGERLQFMQALQEVW 164 (353)
T ss_dssp ECHHHHHHHSTTSTTCCHHHHHHHHHTHHHHHTTHHHHHHHTS-CCHHHHHSCCCSSHHHHHTSSHHHHHHHHHHHHTTH
T ss_pred CCHHHHHHhhcCCchHHHHHHHHhCHHHHHHHHHHHHHHhcCC-ChhHHhcCCChHHHHHHHhhCHHHHHHHHHHHHHHH
Confidence 999986 566666543 56788888876 33321 455788999999999999988
Q ss_pred HhhHHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc-----CCCCeEEEEccCCCC-C
Q 046346 127 RLATSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES-----DLVNLKYVGGDMFKA-I 200 (209)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~-----~~~ri~~~~gD~~~~-~ 200 (209)
....+.+++.++ |++..+|||||||+|.++.+++++||+++++++|+|+|++.|++ ..+||+|++||||++ .
T Consensus 165 ~~~~~~~~~~~~--~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~ 242 (353)
T 4a6d_A 165 SVNGRSVLTAFD--LSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPL 242 (353)
T ss_dssp HHHHHHHHHSSC--GGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTSCC
T ss_pred HHHHHHHHHhcC--cccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcccCceeeecCccccCCC
Confidence 888888999999 88899999999999999999999999999999999999998875 368999999999985 5
Q ss_pred CCCcEEEeC
Q 046346 201 SPADAVVLK 209 (209)
Q Consensus 201 p~~D~~~l~ 209 (209)
|.+|+|+++
T Consensus 243 ~~~D~~~~~ 251 (353)
T 4a6d_A 243 PEADLYILA 251 (353)
T ss_dssp CCCSEEEEE
T ss_pred CCceEEEee
Confidence 669999985
No 2
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.97 E-value=1.2e-30 Score=220.71 Aligned_cols=196 Identities=21% Similarity=0.382 Sum_probs=168.4
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCCCCcee
Q 046346 9 DTEPLEAQIHVWNHIFNFINSMTLKCSIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDEEQGYV 73 (209)
Q Consensus 9 ~~~~~~~~~~l~~~~~g~~~~~~l~~a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~~~~y~ 73 (209)
+....++...+++++.|++.+++|++|+++||||+|.+ +|+|++|||+ |++.|+++..+++|+
T Consensus 16 ~~~~~~~~~~l~~~~~~~~~~~~l~~a~~lglf~~l~~--g~~t~~elA~~~g~~~~~l~rlLr~l~~~g~l~~~~~~y~ 93 (348)
T 3lst_A 16 DMDRLQSALALYEEAMGYTYAAALRAAAAVGVADHLVD--GPRTPAELAAATGTDADALRRVLRLLAVRDVVRESDGRFA 93 (348)
T ss_dssp CCCHHHHHHHHHHHHTTHHHHHHHHHHHHHTGGGGGTT--SCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTEEE
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhC--CCCCHHHHHHHhCcCHHHHHHHHHHHHhCCCEEecCCEEe
Confidence 34566788999999999999999999999999999985 7999999999 788999555789999
Q ss_pred cCHhhhhhhcCCCcc-----------------cchhhhhhcCCCCCccc-------cccCCCcHHHHHHHHHHHhhhHhh
Q 046346 74 LTNASKLLLKDNPLS-----------------QQLRSWFQNDDPTPFGT-------EYDGDEPKLNNFFNEAMASDARLA 129 (209)
Q Consensus 74 ~t~~s~~l~~~~~~~-----------------~~l~~~l~~~~~~~f~~-------~~~~~~~~~~~~f~~~m~~~~~~~ 129 (209)
+|+.++.|+++++.+ .+|++++++|. ++|.. +|+.++|+..+.|.++|...+...
T Consensus 94 ~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~ 172 (348)
T 3lst_A 94 LTDKGAALRSDSPVPARAGILMFTDTMFWTMSHRVASALGPER-PAFADIFGSSLDAYFDGDAEVEALYYEGMETVSAAE 172 (348)
T ss_dssp ECTTTGGGSTTSSSCSHHHHHHHTSHHHHHHHHTHHHHTCTTC-CCHHHHHSSCHHHHHTTCHHHHHHHHHHHHHHHHTT
T ss_pred cCHHHHHHhcCCCccHHHHHHHhcCHHHHHHHHHHHHHHhcCC-ChhhHHhCCCHHHHHHhCHHHHHHHHHHHHHhhhhh
Confidence 999999887766532 46778888775 45432 677889999999999999988888
Q ss_pred HHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhcc----cCCCCeEEEEccCCCCCCCCcE
Q 046346 130 TSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLE----SDLVNLKYVGGDMFKAISPADA 205 (209)
Q Consensus 130 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~----~~~~ri~~~~gD~~~~~p~~D~ 205 (209)
.+.+++.++ +++..+|||||||+|.++..+++++|+++++++|+|+++..++ ...+||+++.+|+++++|.+|+
T Consensus 173 ~~~~~~~~~--~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~p~~D~ 250 (348)
T 3lst_A 173 HLILARAGD--FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREVPHADV 250 (348)
T ss_dssp HHHHHHHSC--CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHTTCCCCCGGGTTSEEEEECCTTTCCCCCSE
T ss_pred HHHHHHhCC--ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhhcccccccCCCCCeEEEecCCCCCCCCCcE
Confidence 888899998 7888999999999999999999999999999999998887332 1457999999999988889999
Q ss_pred EEeC
Q 046346 206 VVLK 209 (209)
Q Consensus 206 ~~l~ 209 (209)
|+++
T Consensus 251 v~~~ 254 (348)
T 3lst_A 251 HVLK 254 (348)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9873
No 3
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.97 E-value=1.2e-30 Score=222.29 Aligned_cols=196 Identities=32% Similarity=0.547 Sum_probs=166.2
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhhCC-CCCCHHHHHH--------------------HHhCCCCCCC-
Q 046346 11 EPLEAQIHVWNHIFNFINSMTLKCSIQLGIPDIINKHG-KPMTLNELQK--------------------LVSSGNNNDE- 68 (209)
Q Consensus 11 ~~~~~~~~l~~~~~g~~~~~~l~~a~~lglfd~L~~~g-~~~t~~eLA~--------------------L~~~g~~e~~- 68 (209)
+..++...+++++++++.+++|++|+++||||+|...| +|+|++|||+ |++.|+++..
T Consensus 16 ~~~~~~~~~~~l~~~~~~~~~l~~a~~Lgifd~L~~~g~~~~t~~eLA~~~g~~~~~~~~~~l~rlLr~L~~~g~l~~~~ 95 (364)
T 3p9c_A 16 ADEDACMFALQLASSSVLPMTLKNAIELGLLEILVAAGGKSLTPTEVAAKLPSAANPEAPDMVDRILRLLASYNVVTCLV 95 (364)
T ss_dssp HHHHHHHHHHHHTTTTHHHHHHHHHHHHTHHHHHHHTTTCCBCHHHHHHTTTCTTCTTHHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHCChHHHHhhcCCCCCCHHHHHHhcCCCCCccchhhHHHHHHHHHhCCCEEEec
Confidence 46677889999999999999999999999999999864 6999999997 4667774322
Q ss_pred --------CCceecCHhhhhhhcCC-Ccc-----------------cchhhhhhcCCCCCccc-------cccCCCcHHH
Q 046346 69 --------EQGYVLTNASKLLLKDN-PLS-----------------QQLRSWFQNDDPTPFGT-------EYDGDEPKLN 115 (209)
Q Consensus 69 --------~~~y~~t~~s~~l~~~~-~~~-----------------~~l~~~l~~~~~~~f~~-------~~~~~~~~~~ 115 (209)
+++|.+|+.++.|+.++ +.+ .+|.+++++|+ ++|+. +|+..+|+..
T Consensus 96 ~~~~~g~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~r~g~-~~~~~~~g~~~~~~~~~~~~~~ 174 (364)
T 3p9c_A 96 EEGKDGRLSRSYGAAPVCKFLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGG-IPFNKAYGMSAFEYHGTDPRFN 174 (364)
T ss_dssp EECSSSCEEEEEEECGGGGGSSCCTTSCCTHHHHHHHTSHHHHGGGGGHHHHHHHCS-CHHHHHHSSCHHHHHTTCHHHH
T ss_pred cccCCCCcCCEEecCHHHHHHcCCCCCCCHHHHHHHhcCHHHHHHHhCHHHHHhhCC-ChHHHhcCCCHHHHHHhCHHHH
Confidence 47899999999887654 322 56778888876 55543 6778899999
Q ss_pred HHHHHHHHhhhHhhHHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhcccCCCCeEEEEcc
Q 046346 116 NFFNEAMASDARLATSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLESDLVNLKYVGGD 195 (209)
Q Consensus 116 ~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~~~~ri~~~~gD 195 (209)
+.|+++|...+....+.+++.++. +++..+|||||||+|.++..+++++|+++++++|+|++++.|+ ..+||+|+.+|
T Consensus 175 ~~f~~~m~~~~~~~~~~~~~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~-~~~~v~~~~~D 252 (364)
T 3p9c_A 175 RVFNEGMKNHSIIITKKLLELYHG-FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAP-QFPGVTHVGGD 252 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCT-TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCC-CCTTEEEEECC
T ss_pred HHHHHHHHHhhHHHHHHHHHhccc-ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhh-hcCCeEEEeCC
Confidence 999999998888777888888863 6778999999999999999999999999999999999999988 45799999999
Q ss_pred CCCCCCCCcEEEeC
Q 046346 196 MFKAISPADAVVLK 209 (209)
Q Consensus 196 ~~~~~p~~D~~~l~ 209 (209)
|++++|..|+|+++
T Consensus 253 ~~~~~p~~D~v~~~ 266 (364)
T 3p9c_A 253 MFKEVPSGDTILMK 266 (364)
T ss_dssp TTTCCCCCSEEEEE
T ss_pred cCCCCCCCCEEEeh
Confidence 99988888999874
No 4
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.97 E-value=1.9e-30 Score=219.68 Aligned_cols=205 Identities=47% Similarity=0.826 Sum_probs=170.5
Q ss_pred CCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhhCCCCCCHHHHHH------------------HHhCC
Q 046346 2 NLIDGERDTEPLEAQIHVWNHIFNFINSMTLKCSIQLGIPDIINKHGKPMTLNELQK------------------LVSSG 63 (209)
Q Consensus 2 ~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~l~~a~~lglfd~L~~~g~~~t~~eLA~------------------L~~~g 63 (209)
|-|....+.+++++...+++++.+++.+.+|++++++|||++|...|+|.|++|||+ |++.|
T Consensus 3 ~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~l~~a~~lgif~~L~~~~~~~t~~ela~~~~~~~~~~~~l~rlLr~L~~~g 82 (352)
T 1fp2_A 3 SSINGRKPSEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVRRLMRYLAHNG 82 (352)
T ss_dssp -----CCSTHHHHHHHHHHHHHTTHHHHHHHHHHHHTTHHHHHHHHTSCEEHHHHHHHHTCCGGGHHHHHHHHHHHHHTT
T ss_pred ccccCCChHHHhhHHHHHHHHHHHHHHHHHHHHHHHCChhhhhhhcCCCccHHHHHHHhCcCCCChHHHHHHHHHHHhCC
Confidence 567888889999999999999999999999999999999999987545999999998 67889
Q ss_pred CCC-C--CCCceecCHhhhhhhcCCCcc-----------------cchhhhhh-cCCCCCccc-------cccCCCcHHH
Q 046346 64 NNN-D--EEQGYVLTNASKLLLKDNPLS-----------------QQLRSWFQ-NDDPTPFGT-------EYDGDEPKLN 115 (209)
Q Consensus 64 ~~e-~--~~~~y~~t~~s~~l~~~~~~~-----------------~~l~~~l~-~~~~~~f~~-------~~~~~~~~~~ 115 (209)
+++ . ++++|++|+.++.|+.+++.+ .+|+++++ +|. ++|.. +|+.++|+..
T Consensus 83 ll~~~~~~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~g~-~~~~~~~g~~~~~~~~~~~~~~ 161 (352)
T 1fp2_A 83 FFEIITKEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEEDL-TLFGVTLGSGFWDFLDKNPEYN 161 (352)
T ss_dssp SEEEEESSSEEEEECHHHHTTSTTSSSCCHHHHHHHTCHHHHHGGGGHHHHHTCSSC-CHHHHHHSSCHHHHHHHCHHHH
T ss_pred eEEEecCCCCeEeCCHHHHHHhCCCCccHHHHHHHhcCchHHHHHHHHHHHHHhcCC-ChHHHHcCCCHHHHHHhChHHH
Confidence 854 3 368999999999888776532 57788888 554 55532 5667889999
Q ss_pred HHHHHHHHhhhHhhHHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhcccCCCCeEEEEcc
Q 046346 116 NFFNEAMASDARLATSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLESDLVNLKYVGGD 195 (209)
Q Consensus 116 ~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~~~~ri~~~~gD 195 (209)
+.|+++|...+....+. ++.+++.+++..+|||||||+|.++..+++++|+++++++|+|.+++.|++ ..+++++.+|
T Consensus 162 ~~f~~~m~~~~~~~~~~-~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-~~~v~~~~~d 239 (352)
T 1fp2_A 162 TSFNDAMASDSKLINLA-LRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSG-SNNLTYVGGD 239 (352)
T ss_dssp HHHHHHHHHTHHHHHHH-HHTCHHHHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCC-BTTEEEEECC
T ss_pred HHHHHHHHhcchhhhhH-HHhcccccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeCHHHHhhccc-CCCcEEEecc
Confidence 99999999887766666 777732377889999999999999999999999999999999999999885 3569999999
Q ss_pred CCCCCCCCcEEEeC
Q 046346 196 MFKAISPADAVVLK 209 (209)
Q Consensus 196 ~~~~~p~~D~~~l~ 209 (209)
+++++|.+|+|+++
T Consensus 240 ~~~~~p~~D~v~~~ 253 (352)
T 1fp2_A 240 MFTSIPNADAVLLK 253 (352)
T ss_dssp TTTCCCCCSEEEEE
T ss_pred ccCCCCCccEEEee
Confidence 99988889999874
No 5
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.97 E-value=8.2e-30 Score=217.27 Aligned_cols=193 Identities=24% Similarity=0.409 Sum_probs=166.4
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCC-CCCCc-eec
Q 046346 12 PLEAQIHVWNHIFNFINSMTLKCSIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNN-DEEQG-YVL 74 (209)
Q Consensus 12 ~~~~~~~l~~~~~g~~~~~~l~~a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e-~~~~~-y~~ 74 (209)
..+...++++++.+++.+++|++++++||||+|.. +|+|++|||+ |++.|+++ ..+++ |.+
T Consensus 35 ~~~~~~~l~~l~~~~~~~~~l~~a~~lglf~~l~~--g~~t~~eLA~~~g~~~~~l~rlLr~L~~~g~l~~~~~~~~y~~ 112 (369)
T 3gwz_A 35 RAAAEETVNDILQGAWKARAIHVAVELGVPELLQE--GPRTATALAEATGAHEQTLRRLLRLLATVGVFDDLGHDDLFAQ 112 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGTT--SCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSSEECSSTTEEEC
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHCChhhhhcC--CCCCHHHHHHHHCcCHHHHHHHHHHHHhCCCEEEeCCCceEec
Confidence 34667889999999999999999999999999985 7999999999 78899854 46788 999
Q ss_pred CHhhhhhhcCCCcc-----------------cchhhhhhcCCCCCccc-------cccCCCcHHHHHHHHHHHhhhHhhH
Q 046346 75 TNASKLLLKDNPLS-----------------QQLRSWFQNDDPTPFGT-------EYDGDEPKLNNFFNEAMASDARLAT 130 (209)
Q Consensus 75 t~~s~~l~~~~~~~-----------------~~l~~~l~~~~~~~f~~-------~~~~~~~~~~~~f~~~m~~~~~~~~ 130 (209)
|+.++.|+++++.+ .+|+++++++. ++|.. +|+.++|+..+.|.++|...+....
T Consensus 113 t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~ 191 (369)
T 3gwz_A 113 NALSAVLLPDPASPVATDARFQAAPWHWRAWEQLTHSVRTGE-ASFDVANGTSFWQLTHEDPKARELFNRAMGSVSLTEA 191 (369)
T ss_dssp CHHHHTTSCCTTCHHHHHHHHHHSHHHHHHHHTHHHHHHHSS-CSHHHHHSSCHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHhcCCchhHHHHHHHcCCHHHHHHHHhHHHHHhCCC-ChhHhhcCCCHHHHHHhCHHHHHHHHHHHHHHHhhhH
Confidence 99998887766532 45677788775 44432 5667889999999999998888778
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc------CCCCeEEEEccCCCCCCC-C
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES------DLVNLKYVGGDMFKAISP-A 203 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~------~~~ri~~~~gD~~~~~p~-~ 203 (209)
+.+++.++ +.+..+|||||||+|.++..+++++|+++++++|+|.+++.|++ ..+||+|+.+|+++++|. +
T Consensus 192 ~~l~~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~~~ 269 (369)
T 3gwz_A 192 GQVAAAYD--FSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLERPPVAEEARELLTGRGLADRCEILPGDFFETIPDGA 269 (369)
T ss_dssp HHHHHHSC--CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCSSC
T ss_pred HHHHHhCC--CccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCCCCCCCCc
Confidence 88889888 78889999999999999999999999999999999999998875 367999999999998995 9
Q ss_pred cEEEeC
Q 046346 204 DAVVLK 209 (209)
Q Consensus 204 D~~~l~ 209 (209)
|+|+++
T Consensus 270 D~v~~~ 275 (369)
T 3gwz_A 270 DVYLIK 275 (369)
T ss_dssp SEEEEE
T ss_pred eEEEhh
Confidence 999874
No 6
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.97 E-value=4.9e-30 Score=217.66 Aligned_cols=202 Identities=48% Similarity=0.828 Sum_probs=169.3
Q ss_pred CCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhhCCCCCCHHHHHH------------------HHhCCCCC-
Q 046346 6 GERDTEPLEAQIHVWNHIFNFINSMTLKCSIQLGIPDIINKHGKPMTLNELQK------------------LVSSGNNN- 66 (209)
Q Consensus 6 ~~~~~~~~~~~~~l~~~~~g~~~~~~l~~a~~lglfd~L~~~g~~~t~~eLA~------------------L~~~g~~e- 66 (209)
|..+.+++++...+++++.+++.+.+|++++++|||++|...|+|+|++|||+ |++.|+++
T Consensus 1 ~~~~~~~~~~~~~l~~~~~~~~~~~~l~~a~~lgif~~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~gll~~ 80 (358)
T 1zg3_A 1 GSEESELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNILHRFLRLLTHNGFFAK 80 (358)
T ss_dssp CTTTSCCTTHHHHHHHHHTTHHHHHHHHHHHHHTHHHHHHHHTSCEEHHHHHHHTTCCTTTHHHHHHHHHHHHHTTSEEE
T ss_pred CCchHHhhhHHHHHHHHHHHHHHHHHHHHHHHCChHhHHhhcCCCcCHHHHHHhcCCCCcchHHHHHHHHHHhhCCcEEE
Confidence 34557889999999999999999999999999999999997545999999998 67889843
Q ss_pred C-----C-----CCceecCHhhhhhhcCCCcc-----------------cchhhhhhcCC-CCCccc-------cccCCC
Q 046346 67 D-----E-----EQGYVLTNASKLLLKDNPLS-----------------QQLRSWFQNDD-PTPFGT-------EYDGDE 111 (209)
Q Consensus 67 ~-----~-----~~~y~~t~~s~~l~~~~~~~-----------------~~l~~~l~~~~-~~~f~~-------~~~~~~ 111 (209)
. . +++|++|+.++.|+++++.+ .+|+++++++. .++|+. +|+.++
T Consensus 81 ~~~~~~~~~g~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~~~g~~~~~~~~~~ 160 (358)
T 1zg3_A 81 TIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSSLDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKD 160 (358)
T ss_dssp EEECCSSSSCCCEEEEEECHHHHTTCTTSTTCCHHHHHHHTSHHHHGGGGGHHHHHHCSCCCCHHHHHHSSCHHHHHTSG
T ss_pred ecccccccCCCCCCEEeCCHHHHHHhCCCCccHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChHHHHhCCCHHHHHhcC
Confidence 3 2 47999999999888776532 57888898873 245542 566788
Q ss_pred cHHHH--HHHHHHHhhhHhhHHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhcccCCCCe
Q 046346 112 PKLNN--FFNEAMASDARLATSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLESDLVNL 189 (209)
Q Consensus 112 ~~~~~--~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~~~~ri 189 (209)
|+..+ .|+++|...+.... .+++.+++.+.+..+|||||||+|.++..+++++|+++++++|+|.+++.+++ ..+|
T Consensus 161 p~~~~~~~f~~~m~~~~~~~~-~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-~~~v 238 (358)
T 1zg3_A 161 SESSTLSMFQDAMASDSRMFK-LVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTG-NENL 238 (358)
T ss_dssp GGHHHHHHHHHHHHHHHHTHH-HHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCC-CSSE
T ss_pred hhhhhHHHHHHHHhcccHHHH-HHHHhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhccc-CCCc
Confidence 99989 99999998777655 77888832377889999999999999999999999999999999999998885 4569
Q ss_pred EEEEccCCCCCCCCcEEEeC
Q 046346 190 KYVGGDMFKAISPADAVVLK 209 (209)
Q Consensus 190 ~~~~gD~~~~~p~~D~~~l~ 209 (209)
+++.+|+++++|.+|+|+++
T Consensus 239 ~~~~~d~~~~~~~~D~v~~~ 258 (358)
T 1zg3_A 239 NFVGGDMFKSIPSADAVLLK 258 (358)
T ss_dssp EEEECCTTTCCCCCSEEEEE
T ss_pred EEEeCccCCCCCCceEEEEc
Confidence 99999999988889999874
No 7
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.97 E-value=5.8e-30 Score=218.21 Aligned_cols=196 Identities=30% Similarity=0.529 Sum_probs=165.2
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhhC---CCCCCHHHHHH-------------------HHhCCCCCC-
Q 046346 11 EPLEAQIHVWNHIFNFINSMTLKCSIQLGIPDIINKH---GKPMTLNELQK-------------------LVSSGNNND- 67 (209)
Q Consensus 11 ~~~~~~~~l~~~~~g~~~~~~l~~a~~lglfd~L~~~---g~~~t~~eLA~-------------------L~~~g~~e~- 67 (209)
+..++...+++++.+++.+++|++|+++||||+|... ++|+|++|||+ |++.|+++.
T Consensus 17 ~~~~~~~~~~~l~~~~~~~~~l~~a~~Lglfd~L~~~~gp~~~~t~~eLA~~~~~~~~~~~~~l~rlLr~L~~~gll~~~ 96 (368)
T 3reo_A 17 SDEEANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTYT 96 (368)
T ss_dssp CHHHHHHHHHHHHTTTHHHHHHHHHHHTTHHHHHHHHCCTTCCBCHHHHHTTSSCCCTTHHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCchhHHhhcCCCCCCcCHHHHHHhcCcCCCcchhhHHHHHHHHHhCCCeEEe
Confidence 5677889999999999999999999999999999873 25799999997 567888432
Q ss_pred ----C----CCceecCHhhhhhhcCC-Ccc-----------------cchhhhhhcCCCCCccc-------cccCCCcHH
Q 046346 68 ----E----EQGYVLTNASKLLLKDN-PLS-----------------QQLRSWFQNDDPTPFGT-------EYDGDEPKL 114 (209)
Q Consensus 68 ----~----~~~y~~t~~s~~l~~~~-~~~-----------------~~l~~~l~~~~~~~f~~-------~~~~~~~~~ 114 (209)
. +++|++|+.++.|+.+. +.+ .+|.+++++|. ++|+. +|+..+|+.
T Consensus 97 ~~~~~~g~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~g~-~~~~~~~g~~~~~~~~~~~~~ 175 (368)
T 3reo_A 97 LRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLLATDKVLLEPWFYLKDAILEGG-IPFNKAYGMNIFDYHGTDHRI 175 (368)
T ss_dssp EEECTTSCEEEEEEECTTHHHHSCCTTSCCSHHHHHHHTCHHHHGGGGGHHHHHHHCS-CHHHHHSSSCHHHHHTTCHHH
T ss_pred cccCCCCcccceeCcCHHHHHHhCCCCCCCHHHHHHHhcCHHHHhhhhchHHHHhcCC-CHHHHHhCCCHHHHHhhCHHH
Confidence 1 36899999999887543 332 56778888875 45542 667789999
Q ss_pred HHHHHHHHHhhhHhhHHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhcccCCCCeEEEEc
Q 046346 115 NNFFNEAMASDARLATSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLESDLVNLKYVGG 194 (209)
Q Consensus 115 ~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~~~~ri~~~~g 194 (209)
.+.|+++|...+....+.+++.++. +++..+|||||||+|.++..+++++|+++++++|+|++++.++ ..+||+|+.+
T Consensus 176 ~~~f~~~m~~~~~~~~~~~~~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~-~~~~v~~~~~ 253 (368)
T 3reo_A 176 NKVFNKGMSSNSTITMKKILEMYNG-FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAP-AFSGVEHLGG 253 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCT-TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCC-CCTTEEEEEC
T ss_pred HHHHHHHHHhhhhhHHHHHHHhccc-ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHhhh-hcCCCEEEec
Confidence 9999999998887777888888762 6778999999999999999999999999999999999999888 4579999999
Q ss_pred cCCCCCCCCcEEEeC
Q 046346 195 DMFKAISPADAVVLK 209 (209)
Q Consensus 195 D~~~~~p~~D~~~l~ 209 (209)
|+++++|..|+|+++
T Consensus 254 d~~~~~p~~D~v~~~ 268 (368)
T 3reo_A 254 DMFDGVPKGDAIFIK 268 (368)
T ss_dssp CTTTCCCCCSEEEEE
T ss_pred CCCCCCCCCCEEEEe
Confidence 999988888999874
No 8
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.97 E-value=1.2e-29 Score=215.73 Aligned_cols=204 Identities=22% Similarity=0.261 Sum_probs=160.3
Q ss_pred CCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCC
Q 046346 1 MNLIDGERDTEPLEAQIHVWNHIFNFINSMTLKCSIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNN 65 (209)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~l~~a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~ 65 (209)
|+.---+.+.+++++...+++++.|++.+++|++++++||||+|+..++|+|++|||+ |++.|++
T Consensus 1 ~~~~~~~~~~~~~~a~~~l~~l~~g~~~~~~l~~a~~lgifd~L~~~~~~~t~~eLA~~~g~~~~~l~rlLr~l~~~g~l 80 (363)
T 3dp7_A 1 MSLRYTKEQCTAAEAQRLAQEIAFGPVVFQVSRLMLKFGIFQLLSGKREGYTLQEISGRTGLTRYAAQVLLEASLTIGTI 80 (363)
T ss_dssp ----CCCSCCCSTTHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHTCTTCBCHHHHHHHHTCCHHHHHHHHHHHHHHTSE
T ss_pred CCcccccCchhHHHHHHHHHHHHhhHHHHHHHHHHHHhCHHHHHHhcCCCCCHHHHHHHhCcCHHHHHHHHHHHhhCCCe
Confidence 3333345677899999999999999999999999999999999997457999999999 6889997
Q ss_pred CCCCCceecCHhhhhhhcCCCcc--------------cchhhhhhcCCCC---Cccc-----cccCCCcHHHHH----HH
Q 046346 66 NDEEQGYVLTNASKLLLKDNPLS--------------QQLRSWFQNDDPT---PFGT-----EYDGDEPKLNNF----FN 119 (209)
Q Consensus 66 e~~~~~y~~t~~s~~l~~~~~~~--------------~~l~~~l~~~~~~---~f~~-----~~~~~~~~~~~~----f~ 119 (209)
+..+++|++|+.+++|+++++.+ .+|+++++++.+. .|+. +++.++|+..+. |+
T Consensus 81 ~~~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~L~~~lr~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~f~ 160 (363)
T 3dp7_A 81 LLEEDRYVLAKAGWFLLNDKMARVNMEFNHDVNYQGLFHLEEALLNGRPEGLKVFGEWPTIYEGLSQLPEQVQKSWFGFD 160 (363)
T ss_dssp EEETTEEEECHHHHHHHHCHHHHHHHHHHHHTTHHHHTTHHHHHHHSSCGGGGGTCCCSSHHHHGGGSCHHHHHHHHHHH
T ss_pred EecCCEEecccchHHhhCCCcccchheeecHHhhhhHHHHHHHHhcCCCccccccCchHhHHHHHhhCHHHHHHHHHHHH
Confidence 66689999999999888765432 6889999987632 1221 556677776653 55
Q ss_pred HHHHhhhHhhHHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc------CCCCeEEEE
Q 046346 120 EAMASDARLATSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES------DLVNLKYVG 193 (209)
Q Consensus 120 ~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~------~~~ri~~~~ 193 (209)
.+|.... ...+++.+. ..+..+|||||||+|.++..+++++|+++++++|+|.+++.|++ ..+||+++.
T Consensus 161 ~~~~~~~---~~~~l~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~ 235 (363)
T 3dp7_A 161 HFYSDQS---FGKALEIVF--SHHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHG 235 (363)
T ss_dssp HHTTCCC---CHHHHHHHG--GGCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHHHHTTCTTGGGEEEEE
T ss_pred HHhhhhh---HHHHHHHhc--ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHHHHHhcCcccceEEEE
Confidence 5554322 233444443 35779999999999999999999999999999999999998875 236899999
Q ss_pred ccCCCC---CCC-CcEEEeC
Q 046346 194 GDMFKA---ISP-ADAVVLK 209 (209)
Q Consensus 194 gD~~~~---~p~-~D~~~l~ 209 (209)
+|++++ +|. +|+|+++
T Consensus 236 ~d~~~~~~~~p~~~D~v~~~ 255 (363)
T 3dp7_A 236 ANLLDRDVPFPTGFDAVWMS 255 (363)
T ss_dssp CCCCSSSCCCCCCCSEEEEE
T ss_pred ccccccCCCCCCCcCEEEEe
Confidence 999984 675 9999874
No 9
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.97 E-value=2.2e-30 Score=217.51 Aligned_cols=191 Identities=24% Similarity=0.307 Sum_probs=161.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCC-CCCCceecCHh
Q 046346 14 EAQIHVWNHIFNFINSMTLKCSIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNN-DEEQGYVLTNA 77 (209)
Q Consensus 14 ~~~~~l~~~~~g~~~~~~l~~a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e-~~~~~y~~t~~ 77 (209)
.++..+++++.|++.+++|++|+++||||+|.. +|+|++|||+ |++.|+++ .++++|.+|+.
T Consensus 4 ~~~~~l~~~~~g~~~~~~l~~a~~lglf~~l~~--g~~t~~elA~~~~~~~~~l~rlLr~l~~~gl~~~~~~~~y~~t~~ 81 (332)
T 3i53_A 4 RAAHIGLRALADLATPMAVRVAATLRVADHIAA--GHRTAAEIASAAGAHADSLDRLLRHLVAVGLFTRDGQGVYGLTEF 81 (332)
T ss_dssp -CCSSCHHHHTCCHHHHHHHHHHHHTHHHHHHT--TCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEECTTSBEEECTT
T ss_pred CcHHHHHHHHHhhHHHHHHHHHHHcChHHHHhc--CCCCHHHHHHHHCcCHHHHHHHHHHHHhCCcEEecCCCeEEcCHh
Confidence 345678999999999999999999999999985 7999999999 68899854 46799999999
Q ss_pred hhhhhcCCCcc------------------cchhhhhhcCCCCCccc-------cccCCCcHHHHHHHHHHHhhhHhhHHH
Q 046346 78 SKLLLKDNPLS------------------QQLRSWFQNDDPTPFGT-------EYDGDEPKLNNFFNEAMASDARLATSV 132 (209)
Q Consensus 78 s~~l~~~~~~~------------------~~l~~~l~~~~~~~f~~-------~~~~~~~~~~~~f~~~m~~~~~~~~~~ 132 (209)
++.|+.+++.+ .+|+++++++. ++|.. +|+.++|+..+.|.++|...+....+.
T Consensus 82 s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~ 160 (332)
T 3i53_A 82 GEQLRDDHAAGKRKWLDMNSAVGRGDLGFVELAHSIRTGQ-PAYPVRYGTSFWEDLGSDPVLSASFDTLMSHHLELDYTG 160 (332)
T ss_dssp GGGGSTTCTTCCHHHHCTTSHHHHHGGGGGGHHHHHHHSS-CSHHHHHSSCHHHHHHHCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhcCCchhHHHHHHHcCCHhHHHHHHHHhHHHHhcCC-CHHHHhhCCCHHHHHHhCHHHHHHHHHHHHHhHHhhHHH
Confidence 98887665532 34566777775 45532 556678999999999999887766677
Q ss_pred HHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc------CCCCeEEEEccCCCCCCC-CcE
Q 046346 133 MIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES------DLVNLKYVGGDMFKAISP-ADA 205 (209)
Q Consensus 133 ~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~------~~~ri~~~~gD~~~~~p~-~D~ 205 (209)
+++.++ +++..+|||||||+|.++..+++++|+++++++|+|.+++.|++ ..+||+|+.+|+++++|. +|+
T Consensus 161 ~~~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~~~D~ 238 (332)
T 3i53_A 161 IAAKYD--WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAGAGG 238 (332)
T ss_dssp GGGSSC--CGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCSCSE
T ss_pred HHHhCC--CCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCCCCcE
Confidence 777777 77789999999999999999999999999999999999998874 358999999999998994 999
Q ss_pred EEeC
Q 046346 206 VVLK 209 (209)
Q Consensus 206 ~~l~ 209 (209)
|+++
T Consensus 239 v~~~ 242 (332)
T 3i53_A 239 YVLS 242 (332)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9874
No 10
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.96 E-value=9.8e-29 Score=207.44 Aligned_cols=188 Identities=26% Similarity=0.295 Sum_probs=161.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCC-CCCCceecCHh
Q 046346 14 EAQIHVWNHIFNFINSMTLKCSIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNN-DEEQGYVLTNA 77 (209)
Q Consensus 14 ~~~~~l~~~~~g~~~~~~l~~a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e-~~~~~y~~t~~ 77 (209)
.++..+++++.+++.+.+|++++++|||++|.. +|.|++|||+ |++.|+++ .+++.|.+|+.
T Consensus 7 ~~~~~l~~~~~~~~~~~~l~~~~~lgi~~~l~~--~~~t~~ela~~~~~~~~~l~r~Lr~L~~~g~l~~~~~~~y~~t~~ 84 (334)
T 2ip2_A 7 AAARNLIQVVTGEWKSRCVYVATRLGLADLIES--GIDSDETLAAAVGSDAERIHRLMRLLVAFEIFQGDTRDGYANTPT 84 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHT--TCCSHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTTEEEECHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHcCcHHHHhC--CCCCHHHHHHHhCcCHHHHHHHHHHHHhCCceEecCCCeEecCHH
Confidence 677999999999999999999999999999975 7999999998 78899854 45689999999
Q ss_pred hhhhhcCCCcc----------------cchhhhhhcCCCCCccc-------cccCCCcHHHHHHHHHHHhhhHhhHHHHH
Q 046346 78 SKLLLKDNPLS----------------QQLRSWFQNDDPTPFGT-------EYDGDEPKLNNFFNEAMASDARLATSVMI 134 (209)
Q Consensus 78 s~~l~~~~~~~----------------~~l~~~l~~~~~~~f~~-------~~~~~~~~~~~~f~~~m~~~~~~~~~~~~ 134 (209)
++.|+ +++.+ .+|+++++++. ++|.. +|+.++|+..+.|+++| ..+....+.++
T Consensus 85 s~~l~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m-~~~~~~~~~~~ 161 (334)
T 2ip2_A 85 SHLLR-DVEGSFRDMVLFYGEEFHAAWTPACEALLSGT-PGFELAFGEDFYSYLKRCPDAGRRFLLAM-KASNLAFHEIP 161 (334)
T ss_dssp HHTTS-SSTTCSHHHHHHHTTHHHHHTTTHHHHHHHCC-CHHHHHHSSCHHHHHHHCHHHHHHHHHHH-GGGHHHHHHHH
T ss_pred HHHHh-CCCccHHHHHHHhcCchhhHHHHHHHHHhcCC-ChhhhhcCCCHHHHHhhChHHHHHHHHHH-HHHHHHHHHHH
Confidence 98887 65432 46778888775 45532 55667899999999999 87777778888
Q ss_pred HhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc------CCCCeEEEEccCCCCCCC-CcEEE
Q 046346 135 QKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES------DLVNLKYVGGDMFKAISP-ADAVV 207 (209)
Q Consensus 135 ~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~------~~~ri~~~~gD~~~~~p~-~D~~~ 207 (209)
+.++ +.+ .+|||||||+|.++..+++++|+.+++++|+|.+++.|++ ..+||+++.+|+++++|. +|+|+
T Consensus 162 ~~~~--~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~ 238 (334)
T 2ip2_A 162 RLLD--FRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYL 238 (334)
T ss_dssp HHSC--CTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTTCCCSSCSEEE
T ss_pred HhCC--CCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCCCCCCCCCEEE
Confidence 8887 677 9999999999999999999999999999999989888775 257999999999998887 99998
Q ss_pred eC
Q 046346 208 LK 209 (209)
Q Consensus 208 l~ 209 (209)
++
T Consensus 239 ~~ 240 (334)
T 2ip2_A 239 LS 240 (334)
T ss_dssp EE
T ss_pred Ec
Confidence 63
No 11
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.96 E-value=4.7e-28 Score=204.66 Aligned_cols=195 Identities=17% Similarity=0.253 Sum_probs=160.1
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCCCCcee
Q 046346 9 DTEPLEAQIHVWNHIFNFINSMTLKCSIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDEEQGYV 73 (209)
Q Consensus 9 ~~~~~~~~~~l~~~~~g~~~~~~l~~a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~~~~y~ 73 (209)
+.+.++.+..+++++.+++.+.+|++++++|||++|. +|+|++|||+ |++.|+++..+++|.
T Consensus 18 ~~~~l~~p~~l~~~~~~~~~~~~l~~a~~lgif~~l~---~~~t~~elA~~~~~~~~~l~rlLr~L~~~gll~~~~~~y~ 94 (352)
T 3mcz_A 18 DKAALTSVVDLVKLSDQYRQSAILHYAVADKLFDLTQ---TGRTPAEVAASFGMVEGKAAILLHALAALGLLTKEGDAFR 94 (352)
T ss_dssp SCCCCCSHHHHHHHHHTHHHHHHHHHHHHTTHHHHTT---SCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCChHHHhC---CCCCHHHHHHHhCcChHHHHHHHHHHHHCCCeEecCCeee
Confidence 4444555566999999999999999999999999996 3999999998 788999665568999
Q ss_pred cCHhhh-hhhcCCCcc---------------cchhhhhhcCCCCCccc-cccCCCcHHHHHHHHHHHhhhHhhHHHHHHh
Q 046346 74 LTNASK-LLLKDNPLS---------------QQLRSWFQNDDPTPFGT-EYDGDEPKLNNFFNEAMASDARLATSVMIQK 136 (209)
Q Consensus 74 ~t~~s~-~l~~~~~~~---------------~~l~~~l~~~~~~~f~~-~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~ 136 (209)
+|+.++ ++.++++.+ .++++++++|.+.+|+. .++..+|+....|.++|...... ...+++.
T Consensus 95 ~t~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~f~~~~~~~~~~~~~~~f~~~m~~~~~~-~~~~l~~ 173 (352)
T 3mcz_A 95 NTALTERYLTTTSADYIGPIVEHQYLQWDNWPRLGEILRSEKPLAFQQESRFAHDTRARDAFNDAMVRLSQP-MVDVVSE 173 (352)
T ss_dssp ECHHHHHHHSTTCTTCCHHHHHHHHTTTTTGGGHHHHHTCSSCCTTSHHHHTTTCHHHHHHHHHHHHHHHHH-HHHHHHT
T ss_pred cCHHHHhhccCCChhhHHHHHHHhHHHHHHHHHHHHHHhCCCCCCcccccccccCHHHHHHHHHHHHhhhhh-HHHHHHh
Confidence 999997 555555543 57888999887555554 44567899999999999874332 2367888
Q ss_pred ccccccC-CCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc------CCCCeEEEEccCCCC---CCC-CcE
Q 046346 137 CKNVFEG-LNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES------DLVNLKYVGGDMFKA---ISP-ADA 205 (209)
Q Consensus 137 ~~~~~~~-~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~------~~~ri~~~~gD~~~~---~p~-~D~ 205 (209)
++ +.+ ..+|||||||+|.++..+++++|+++++++|+|++++.+++ ..+||+++.+|+++. .|. +|+
T Consensus 174 ~~--~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~ 251 (352)
T 3mcz_A 174 LG--VFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADV 251 (352)
T ss_dssp CG--GGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEE
T ss_pred CC--CcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccE
Confidence 88 666 89999999999999999999999999999999999988774 346899999999985 565 999
Q ss_pred EEeC
Q 046346 206 VVLK 209 (209)
Q Consensus 206 ~~l~ 209 (209)
|+++
T Consensus 252 v~~~ 255 (352)
T 3mcz_A 252 VMLN 255 (352)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9873
No 12
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.96 E-value=7e-28 Score=205.44 Aligned_cols=197 Identities=30% Similarity=0.485 Sum_probs=160.5
Q ss_pred CccHHHHHHH--HHHHHHHHHHHHHHHHHcCchhHhhhCCCC---CCHHHHHH---------------------HHhCCC
Q 046346 11 EPLEAQIHVW--NHIFNFINSMTLKCSIQLGIPDIINKHGKP---MTLNELQK---------------------LVSSGN 64 (209)
Q Consensus 11 ~~~~~~~~l~--~~~~g~~~~~~l~~a~~lglfd~L~~~g~~---~t~~eLA~---------------------L~~~g~ 64 (209)
+..++...++ +++.+++.+.+|++++++|||++|...|+| +|++|||+ |++.|+
T Consensus 18 ~~~~~~~~l~~~~l~~~~~~~~~l~~a~~lgif~~L~~~g~pg~~~t~~eLA~~~~~~~~~~~~~~~l~rlLr~L~~~gl 97 (372)
T 1fp1_D 18 EQTEDSACLSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSV 97 (372)
T ss_dssp -CCHHHHHHHHHHHHHTTHHHHHHHHHHHTTHHHHHHTCSSTTCCBCHHHHHTTSCGGGCCTTHHHHHHHHHHHHHHTTS
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHCChHHHHHhcCCCCCCcCHHHHHHhcCCCCCCCcChHHHHHHHHHHhhCCc
Confidence 5677888888 999999999999999999999999974226 99999985 466788
Q ss_pred CCCC---------CCceecCHhhhhhhcCCC-cc-----------------cchhhhhhcCCCCCccc-------cccCC
Q 046346 65 NNDE---------EQGYVLTNASKLLLKDNP-LS-----------------QQLRSWFQNDDPTPFGT-------EYDGD 110 (209)
Q Consensus 65 ~e~~---------~~~y~~t~~s~~l~~~~~-~~-----------------~~l~~~l~~~~~~~f~~-------~~~~~ 110 (209)
++.. +++|++|+.++.|+.+++ .+ .+|++++++++.++|+. +|+.+
T Consensus 98 l~~~~~~~~~g~~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~~g~~~~~~~~~ 177 (372)
T 1fp1_D 98 LTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGK 177 (372)
T ss_dssp EEEEEEECTTSCEEEEEEECTTGGGGSTTCTTCCCTHHHHHHTCHHHHHHHTTHHHHHHSCC--------------CCSS
T ss_pred eEecccccCCCCcCCeEecCHHHHHHhCCCCCCCHHHHHHHhcCchHHHHHHHHHHHHHcCCCChhHHHhCCCHHHHHHh
Confidence 4322 359999999998887755 22 47788898872255542 66778
Q ss_pred CcHHHHHHHHHHHhhhHhhHHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhcccCCCCeE
Q 046346 111 EPKLNNFFNEAMASDARLATSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLESDLVNLK 190 (209)
Q Consensus 111 ~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~~~~ri~ 190 (209)
+|+..+.|+++|...+....+.+++.++ .+++..+|||||||+|.++..+++++|+++++++|+|.+++.|++ .++|+
T Consensus 178 ~~~~~~~f~~~m~~~~~~~~~~l~~~~~-~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~-~~~v~ 255 (372)
T 1fp1_D 178 DKKMNQIFNKSMVDVCATEMKRMLEIYT-GFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPP-LSGIE 255 (372)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHCC-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCC-CTTEE
T ss_pred CHHHHHHHHHHHHhhhHHHHHHHHHHhh-ccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHHHHhhhh-cCCCE
Confidence 9999999999999888777788888875 266789999999999999999999999999999999999998884 46899
Q ss_pred EEEccCCCCCCCCcEEEeC
Q 046346 191 YVGGDMFKAISPADAVVLK 209 (209)
Q Consensus 191 ~~~gD~~~~~p~~D~~~l~ 209 (209)
++.+|+++++|.+|+|+++
T Consensus 256 ~~~~d~~~~~~~~D~v~~~ 274 (372)
T 1fp1_D 256 HVGGDMFASVPQGDAMILK 274 (372)
T ss_dssp EEECCTTTCCCCEEEEEEE
T ss_pred EEeCCcccCCCCCCEEEEe
Confidence 9999999988889999863
No 13
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.95 E-value=2.7e-27 Score=200.79 Aligned_cols=194 Identities=22% Similarity=0.368 Sum_probs=164.8
Q ss_pred CCCCccHHHHHHHHHHH-HHHHHHHHHHHHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCCCCc
Q 046346 8 RDTEPLEAQIHVWNHIF-NFINSMTLKCSIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDEEQG 71 (209)
Q Consensus 8 ~~~~~~~~~~~l~~~~~-g~~~~~~l~~a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~~~~ 71 (209)
.+.++.++..++++++. +++.+.+|++++++|||++|.. +|.|++|||+ |++.|+++..+++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~lgif~~L~~--~~~t~~eLA~~~g~~~~~l~rlLr~L~~~gll~~~~~~ 100 (359)
T 1x19_A 23 SNNDLLNYYHRANELVFKGLIEFSCMKAAIELDLFSHMAE--GPKDLATLAADTGSVPPRLEMLLETLRQMRVINLEDGK 100 (359)
T ss_dssp CCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTHHHHHTT--CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTE
T ss_pred CccccCCcchHHHHHHHHHHHHHHHHHHHHHcCcHHHHcC--CCCCHHHHHHHhCcChHHHHHHHHHHHhCCCeEeeCCe
Confidence 34567788899999986 8999999999999999999986 7999999998 7889996655679
Q ss_pred eecCHh-hhhhhcCCC---cc----------------cchhhhhhcCCCCCccccccCCCcH---HHHHHHHHHHhhhH-
Q 046346 72 YVLTNA-SKLLLKDNP---LS----------------QQLRSWFQNDDPTPFGTEYDGDEPK---LNNFFNEAMASDAR- 127 (209)
Q Consensus 72 y~~t~~-s~~l~~~~~---~~----------------~~l~~~l~~~~~~~f~~~~~~~~~~---~~~~f~~~m~~~~~- 127 (209)
|++|+. +.+|+.+++ .+ .+|+++++++. +| +|+..+|+ ..+.|..+|...+.
T Consensus 101 y~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~--~~--~~~~~~p~~~~~~~~f~~~m~~~~~~ 176 (359)
T 1x19_A 101 WSLTEFADYMFSPTPKEPNLHQTPVAKAMAFLADDFYMGLSQAVRGQK--NF--KGQVPYPPVTREDNLYFEEIHRSNAK 176 (359)
T ss_dssp EEECHHHHHHSSSSCSBTTBCCHHHHHHHHHHHHHTGGGHHHHHTTSC--CC--CCSSCSSCCSHHHHHHHHHHHHTTCH
T ss_pred EecCHHHHHHhcCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHhcCC--CC--cccccCchhhHHHHHHHHHHHHhccc
Confidence 999997 467777655 22 57788888876 36 56778888 89999999998877
Q ss_pred hhHHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc------CCCCeEEEEccCCC-CC
Q 046346 128 LATSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES------DLVNLKYVGGDMFK-AI 200 (209)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~------~~~ri~~~~gD~~~-~~ 200 (209)
...+.+++.++ +.+..+|||||||+|.++..+++++|+++++++|+|.+++.|++ ..+||+++.+|+++ ++
T Consensus 177 ~~~~~l~~~~~--~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 254 (359)
T 1x19_A 177 FAIQLLLEEAK--LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKESY 254 (359)
T ss_dssp HHHHHHHHHCC--CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCTTTEEEEECCTTTSCC
T ss_pred hhHHHHHHhcC--CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCCCEEEEeCccccCCC
Confidence 77788888888 77889999999999999999999999999999999999988874 35689999999998 56
Q ss_pred CCCcEEEeC
Q 046346 201 SPADAVVLK 209 (209)
Q Consensus 201 p~~D~~~l~ 209 (209)
|.+|+|+++
T Consensus 255 ~~~D~v~~~ 263 (359)
T 1x19_A 255 PEADAVLFC 263 (359)
T ss_dssp CCCSEEEEE
T ss_pred CCCCEEEEe
Confidence 668999863
No 14
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.94 E-value=1.2e-26 Score=194.40 Aligned_cols=190 Identities=18% Similarity=0.209 Sum_probs=159.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCCCCceecCHhh-h
Q 046346 16 QIHVWNHIFNFINSMTLKCSIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDEEQGYVLTNAS-K 79 (209)
Q Consensus 16 ~~~l~~~~~g~~~~~~l~~a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~~~~y~~t~~s-~ 79 (209)
+..+++++.+++.+.+|++++++|||++|.+ +|.|++|||+ |++.|+++..+++|++|+.+ +
T Consensus 7 ~~~l~~~~~~~~~~~~l~~~~~l~i~~~l~~--~~~t~~ela~~~~~~~~~l~r~L~~L~~~g~l~~~~~~y~~t~~~~~ 84 (335)
T 2r3s_A 7 PALFFNTVNAYQRSAAIKAAVELNVFTAISQ--GIESSQSLAQKCQTSERGMRMLCDYLVIIGFMTKQAEGYRLTSDSAM 84 (335)
T ss_dssp SHHHHHHHTTHHHHHHHHHHHHTTHHHHHTT--SEECHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTEEEECHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcChHHHHhc--CCCCHHHHHHHhCCCchHHHHHHHHHHhcCCeEecCCEEecCHHHHH
Confidence 4789999999999999999999999999986 7999999998 78899976678999999999 6
Q ss_pred hhhcCCCcc-----------------cchhhhhhcCCCCCccc-cccCCCcHHHHHHHHHHHhhhHhhHHHHHHhccccc
Q 046346 80 LLLKDNPLS-----------------QQLRSWFQNDDPTPFGT-EYDGDEPKLNNFFNEAMASDARLATSVMIQKCKNVF 141 (209)
Q Consensus 80 ~l~~~~~~~-----------------~~l~~~l~~~~~~~f~~-~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~ 141 (209)
+|..+++.+ .+|+++++++. ++|.. +++.++++....|.+.|..........+++.+++.+
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (335)
T 2r3s_A 85 FLDRQSKFYVGDAIEFLLSPMITNGFNDLTAAVLKGG-TAISSEGTLSPEHPVWVQFAKAMSPMMANPAQLIAQLVNENK 163 (335)
T ss_dssp HTCTTSTTCCGGGHHHHTCHHHHGGGTTHHHHHHHTS-CCSTTTGGGSTTCTHHHHHHHHSGGGGHHHHHHHHHHHTC--
T ss_pred HhccCCcHHHHHHHHHhcchhhHHHHHhHHHHHhcCC-CCCCCcccccCCHHHHHHHHHHHHHHHhhhHHHHHHhccccc
Confidence 777665532 46777888775 44431 456678888899999998877766777888887211
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc------CCCCeEEEEccCCC-CCCC-CcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES------DLVNLKYVGGDMFK-AISP-ADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~------~~~ri~~~~gD~~~-~~p~-~D~~~l 208 (209)
.+..+|||||||+|.++..+++++|+.+++++|++.+++.|++ ..+||+++.+|+++ ++|. +|+|++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~ 238 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDYDLVLL 238 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccCCCCCCCcEEEE
Confidence 7789999999999999999999999999999999988888775 24689999999998 6776 999986
No 15
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.94 E-value=1.1e-26 Score=197.64 Aligned_cols=199 Identities=24% Similarity=0.287 Sum_probs=161.5
Q ss_pred CCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCC-CCC
Q 046346 6 GERDTEPLEAQIHVWNHIFNFINSMTLKCSIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNN-DEE 69 (209)
Q Consensus 6 ~~~~~~~~~~~~~l~~~~~g~~~~~~l~~a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e-~~~ 69 (209)
|+......+....+++++.+++.+.+|++++++|||++|.. +|.|++|||+ |++.|+++ ..+
T Consensus 7 ~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~l~i~~~l~~--~~~t~~eLA~~~g~~~~~l~r~Lr~L~~~Gll~~~~~ 84 (374)
T 1qzz_A 7 GEPLEPTDQDLDVLLKNLGNLVTPMALRVAATLRLVDHLLA--GADTLAGLADRTDTHPQALSRLVRHLTVVGVLEGGEK 84 (374)
T ss_dssp ---CCCCHHHHHHHHHTTTCCHHHHHHHHHHHTTHHHHHHT--TCCSHHHHHHHHTCCHHHHHHHHHHHHHTTSEECCCC
T ss_pred CCCCCCCchHHHHHHHHHHhhHHHHHHHHHHHcChHHHHhC--CCCCHHHHHHHhCcCHHHHHHHHHHHhhCCCEEEeCC
Confidence 44444566777899999999999999999999999999964 7999999999 78899854 366
Q ss_pred C--ceecCHhhhhhhcCCCcc------------------cchhhhhhcCCCCCccc-------cccCCCcHHHHHHHHHH
Q 046346 70 Q--GYVLTNASKLLLKDNPLS------------------QQLRSWFQNDDPTPFGT-------EYDGDEPKLNNFFNEAM 122 (209)
Q Consensus 70 ~--~y~~t~~s~~l~~~~~~~------------------~~l~~~l~~~~~~~f~~-------~~~~~~~~~~~~f~~~m 122 (209)
+ .|.+|+.++.|+.+++.+ .+|+++++++. ++|.. ++...+|+....|.++|
T Consensus 85 ~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~~ 163 (374)
T 1qzz_A 85 QGRPLRPTRLGMLLADGHPAQQRAWLDLNGAVSHADLAFTGLLDVVRTGR-PAYAGRYGRPFWEDLSADVALADSFDALM 163 (374)
T ss_dssp -CCCCEECTTGGGGSTTCTTCHHHHHCTTSHHHHHHGGGGGHHHHHHHSC-CSHHHHHSSCHHHHHHHCHHHHHHHHHTC
T ss_pred CCeEEEEChHHHhhcCCCcccHHHHHHHcCChhhHHHHHHHHHHHHhcCC-ChhhhhhCCCHHHHHhhChHHHHHHHHHH
Confidence 7 999999998888766432 24556677765 44432 34456788889999999
Q ss_pred HhhhHhhHHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc------CCCCeEEEEccC
Q 046346 123 ASDARLATSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES------DLVNLKYVGGDM 196 (209)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~------~~~ri~~~~gD~ 196 (209)
...+....+.+++.++ +.+..+|||||||+|.++..+++++|+++++++|+|.+++.|++ ..+||+++.+|+
T Consensus 164 ~~~~~~~~~~~~~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 241 (374)
T 1qzz_A 164 SCDEDLAYEAPADAYD--WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDF 241 (374)
T ss_dssp GGGSTTTTHHHHHTSC--CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred HHhhHhHHHHHHHhCC--CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCC
Confidence 8777666778888887 77789999999999999999999999999999999999988874 245899999999
Q ss_pred CCCCCC-CcEEEeC
Q 046346 197 FKAISP-ADAVVLK 209 (209)
Q Consensus 197 ~~~~p~-~D~~~l~ 209 (209)
++++|. +|+|+++
T Consensus 242 ~~~~~~~~D~v~~~ 255 (374)
T 1qzz_A 242 FKPLPVTADVVLLS 255 (374)
T ss_dssp TSCCSCCEEEEEEE
T ss_pred CCcCCCCCCEEEEe
Confidence 988887 9999863
No 16
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.94 E-value=8.1e-26 Score=191.46 Aligned_cols=188 Identities=24% Similarity=0.379 Sum_probs=157.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCC-CCCCceecCHhhh
Q 046346 16 QIHVWNHIFNFINSMTLKCSIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNN-DEEQGYVLTNASK 79 (209)
Q Consensus 16 ~~~l~~~~~g~~~~~~l~~a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e-~~~~~y~~t~~s~ 79 (209)
..++++++.+++.+++|++++++|||++|.. +|.|++|||+ |++.|+++ ..+++|.+|+.++
T Consensus 20 ~~~~~~~~~~~~~~~~l~~~~~l~i~~~l~~--~~~t~~ela~~~~~~~~~l~r~L~~L~~~g~~~~~~~g~y~~t~~s~ 97 (360)
T 1tw3_A 20 ALRTLIRLGSLHTPMVVRTAATLRLVDHILA--GARTVKALAARTDTRPEALLRLIRHLVAIGLLEEDAPGEFVPTEVGE 97 (360)
T ss_dssp HHHHHHHHHCSHHHHHHHHHHHTTHHHHHHT--TCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEETTEEEECTTGG
T ss_pred hHHHHHHHHhHHHHHHHHHHHHhCHHHHHhC--CCCCHHHHHHHhCcCHHHHHHHHHHHHHCCCEEecCCCeEEeCHHHH
Confidence 4678999999999999999999999999964 7999999998 78899854 4678999999999
Q ss_pred hhhcCCCcc------------------cchhhhhhcCCCCCccc-------cccCCCcHHHHHHHHHHHhhhHhhHHHHH
Q 046346 80 LLLKDNPLS------------------QQLRSWFQNDDPTPFGT-------EYDGDEPKLNNFFNEAMASDARLATSVMI 134 (209)
Q Consensus 80 ~l~~~~~~~------------------~~l~~~l~~~~~~~f~~-------~~~~~~~~~~~~f~~~m~~~~~~~~~~~~ 134 (209)
.|+.+++.+ .++.++++++. ++|.. +++..+|+....|...|...+....+.++
T Consensus 98 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~p~~~~~f~~~~~~~~~~~~~~l~ 176 (360)
T 1tw3_A 98 LLADDHPAAQRAWHDLTQAVARADISFTRLPDAIRTGR-PTYESIYGKPFYEDLAGRPDLRASFDSLLACDQDVAFDAPA 176 (360)
T ss_dssp GGSTTSTTCHHHHTCTTSHHHHHGGGGGGHHHHHHHCC-CCHHHHHSSCHHHHHHTCHHHHHHHHHHHTTTTTTTTHHHH
T ss_pred HHhcCCchhHHHHHHHhcCchhHHHHHHHHHHHHHcCC-CHHHHhcCCCHHHHHHhChHHHHHHHHHHHHHHHHhHHHHH
Confidence 888776532 23456666665 34331 44456888889999999887777778888
Q ss_pred HhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc------CCCCeEEEEccCCCCCCC-CcEEE
Q 046346 135 QKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES------DLVNLKYVGGDMFKAISP-ADAVV 207 (209)
Q Consensus 135 ~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~------~~~ri~~~~gD~~~~~p~-~D~~~ 207 (209)
+.++ +.+..+|||||||+|.++..+++++|+++++++|+|.+++.|++ ..+||+++.+|+++++|. +|+|+
T Consensus 177 ~~~~--~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~ 254 (360)
T 1tw3_A 177 AAYD--WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAII 254 (360)
T ss_dssp HHSC--CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSCEEEEE
T ss_pred HhCC--CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCCCccEEE
Confidence 8887 77789999999999999999999999999999999999988774 345899999999998887 99998
Q ss_pred e
Q 046346 208 L 208 (209)
Q Consensus 208 l 208 (209)
+
T Consensus 255 ~ 255 (360)
T 1tw3_A 255 L 255 (360)
T ss_dssp E
T ss_pred E
Confidence 6
No 17
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.12 E-value=6.2e-10 Score=90.21 Aligned_cols=98 Identities=17% Similarity=0.270 Sum_probs=69.6
Q ss_pred CcHHHHHHHHHHHhhhHh--hHHHHHHhc-cccccCCCeEEEecCCccHHHHHHHHHC--CCCeEEEeec-hHHHhhccc
Q 046346 111 EPKLNNFFNEAMASDARL--ATSVMIQKC-KNVFEGLNSLVDVGGGTGTAAKAIAKAF--PKLECTCFDL-PHVVNGLES 184 (209)
Q Consensus 111 ~~~~~~~f~~~m~~~~~~--~~~~~~~~~-~~~~~~~~~vlDvGgG~G~~~~~l~~~~--P~l~~~~~Dl-p~v~~~a~~ 184 (209)
+.+.++.|.+.....-.. ....++..+ .....+..+|||||||+|.++..+++++ |+.+++++|+ |.+++.|++
T Consensus 35 ~~~va~~fdd~i~rsvP~Y~~~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~ 114 (261)
T 4gek_A 35 DERVAEVFPDMIQRSVPGYSNIISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRR 114 (261)
T ss_dssp CHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHH
T ss_pred CcchhhhhhhhHhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHH
Confidence 445667787765532111 111111111 1224567899999999999999999986 6789999999 889998875
Q ss_pred ------CCCCeEEEEccCCC-CCCCCcEEEe
Q 046346 185 ------DLVNLKYVGGDMFK-AISPADAVVL 208 (209)
Q Consensus 185 ------~~~ri~~~~gD~~~-~~p~~D~~~l 208 (209)
...+|+++.+|+.+ +.+.+|++++
T Consensus 115 ~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~ 145 (261)
T 4gek_A 115 HIDAYKAPTPVDVIEGDIRDIAIENASMVVL 145 (261)
T ss_dssp HHHTSCCSSCEEEEESCTTTCCCCSEEEEEE
T ss_pred HHHhhccCceEEEeeccccccccccccccee
Confidence 34689999999987 6666998875
No 18
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.01 E-value=3e-10 Score=96.48 Aligned_cols=65 Identities=11% Similarity=0.125 Sum_probs=55.8
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCCCCC-----CCcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFKAIS-----PADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~~~p-----~~D~~~l 208 (209)
...+||||| |+|.++..+++..|+.+++++|+ |.+++.|++ ...||+++.+|+++++| .+|+|++
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~ 247 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFIT 247 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEE
Confidence 458999999 99999999999999999999999 899988875 12389999999988554 2899986
No 19
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.93 E-value=7.9e-09 Score=81.40 Aligned_cols=94 Identities=18% Similarity=0.243 Sum_probs=68.4
Q ss_pred HHHHHHHHHHhhhH---hhHHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc---CC
Q 046346 114 LNNFFNEAMASDAR---LATSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES---DL 186 (209)
Q Consensus 114 ~~~~f~~~m~~~~~---~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~---~~ 186 (209)
....|......... .....+++.+.. ..+..+|||||||+|.++..+++++|..+++++|+ +.+++.|++ ..
T Consensus 13 ~a~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 91 (234)
T 3dtn_A 13 VSGKYDEQRRKFIPCFDDFYGVSVSIASV-DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN 91 (234)
T ss_dssp HHHHHHHHHHHHCTTHHHHHHHHHHTCCC-SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC
T ss_pred HHHHHHHhHHHhCcCHHHHHHHHHHHhhc-CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC
Confidence 44556555443221 122344444431 34568999999999999999999999999999999 788888775 23
Q ss_pred CCeEEEEccCCC-CCCC-CcEEEe
Q 046346 187 VNLKYVGGDMFK-AISP-ADAVVL 208 (209)
Q Consensus 187 ~ri~~~~gD~~~-~~p~-~D~~~l 208 (209)
.+++++.+|+.+ +.+. +|+|+.
T Consensus 92 ~~~~~~~~d~~~~~~~~~fD~v~~ 115 (234)
T 3dtn_A 92 LKVKYIEADYSKYDFEEKYDMVVS 115 (234)
T ss_dssp TTEEEEESCTTTCCCCSCEEEEEE
T ss_pred CCEEEEeCchhccCCCCCceEEEE
Confidence 489999999987 4444 999975
No 20
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.91 E-value=2.2e-09 Score=85.01 Aligned_cols=67 Identities=7% Similarity=-0.015 Sum_probs=58.0
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCCCC---CCcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKAIS---PADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~~p---~~D~~~l 208 (209)
++..+|+|||||+|.+++.+++.+|..+++.+|+ |..++.|++ ..++|++..+|.++++| .+|++++
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~Ivi 90 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITI 90 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEE
Confidence 4567999999999999999999999999999999 777887774 45789999999999776 3898874
No 21
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.87 E-value=1.7e-08 Score=77.99 Aligned_cols=76 Identities=14% Similarity=0.239 Sum_probs=62.1
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCCCCC---
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFKAIS--- 201 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~~~p--- 201 (209)
..++..++ .....+|||||||+|.++..+++++|..+++++|+ +.+++.|++ ..++++++.+|+.+.++
T Consensus 30 ~~~l~~l~--~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 107 (204)
T 3e05_A 30 AVTLSKLR--LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLP 107 (204)
T ss_dssp HHHHHHTT--CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSC
T ss_pred HHHHHHcC--CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCC
Confidence 34455555 56678999999999999999999999999999999 788887774 23789999999987443
Q ss_pred CCcEEEe
Q 046346 202 PADAVVL 208 (209)
Q Consensus 202 ~~D~~~l 208 (209)
.+|++++
T Consensus 108 ~~D~i~~ 114 (204)
T 3e05_A 108 DPDRVFI 114 (204)
T ss_dssp CCSEEEE
T ss_pred CCCEEEE
Confidence 4999875
No 22
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.84 E-value=1.2e-08 Score=81.98 Aligned_cols=94 Identities=16% Similarity=0.203 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHhh---hHhhHHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCC
Q 046346 113 KLNNFFNEAMASD---ARLATSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVN 188 (209)
Q Consensus 113 ~~~~~f~~~m~~~---~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~r 188 (209)
.....|...+... .......+.+.+....++..+|||||||+|.++..++++.+ +++++|+ +.+++.|++...+
T Consensus 17 ~~a~~yd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~ 94 (263)
T 3pfg_A 17 EIAELYDLVHQGKGKDYHREAADLAALVRRHSPKAASLLDVACGTGMHLRHLADSFG--TVEGLELSADMLAIARRRNPD 94 (263)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTSS--EEEEEESCHHHHHHHHHHCTT
T ss_pred hHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhhCCC
Confidence 4556666666521 11223344444433345668999999999999999999965 6889999 8889888865569
Q ss_pred eEEEEccCCC-CCCC-CcEEEe
Q 046346 189 LKYVGGDMFK-AISP-ADAVVL 208 (209)
Q Consensus 189 i~~~~gD~~~-~~p~-~D~~~l 208 (209)
++++.+|+.+ +.+. +|+|+.
T Consensus 95 ~~~~~~d~~~~~~~~~fD~v~~ 116 (263)
T 3pfg_A 95 AVLHHGDMRDFSLGRRFSAVTC 116 (263)
T ss_dssp SEEEECCTTTCCCSCCEEEEEE
T ss_pred CEEEECChHHCCccCCcCEEEE
Confidence 9999999987 4555 999975
No 23
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.83 E-value=1e-08 Score=83.99 Aligned_cols=65 Identities=15% Similarity=0.268 Sum_probs=56.3
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCCCCC-C---cEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKAISP-A---DAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~~p~-~---D~~~l 208 (209)
...+|||||||+|.++..+++. |+.+++++|+ +.+++.|++ ..+|++|+.+|++++++. + |+|+.
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~~~f~~~D~Ivs 198 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILS 198 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGGGTTTCCEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcccccCCCCEEEE
Confidence 4579999999999999999999 9999999999 788887774 345799999999986654 8 99875
No 24
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.83 E-value=5.9e-09 Score=82.80 Aligned_cols=67 Identities=9% Similarity=-0.060 Sum_probs=57.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCCCC---CCcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKAIS---PADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~~p---~~D~~~l 208 (209)
.+..+|+|||||+|.+++.+++.+|..+++..|+ |..++.|++ ..+||++..+|.++.++ .+|++++
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~Ivi 96 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITI 96 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEE
Confidence 4568999999999999999999999999999999 778887774 46799999999999654 3898864
No 25
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.83 E-value=1.6e-08 Score=78.37 Aligned_cols=90 Identities=20% Similarity=0.261 Sum_probs=65.5
Q ss_pred HHHHHHHHHhhhHhh----HHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----
Q 046346 115 NNFFNEAMASDARLA----TSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----- 184 (209)
Q Consensus 115 ~~~f~~~m~~~~~~~----~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----- 184 (209)
...|........... ...+++.++ ..+. +|||||||+|.++..++++ |..+++++|+ +.+++.|++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~ 89 (219)
T 3dlc_A 14 AKNMDEISKTLFAPIYPIIAENIINRFG--ITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADA 89 (219)
T ss_dssp HHHHHHHHHTTTTTHHHHHHHHHHHHHC--CCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHhhccccHHHHHHHHHhcC--CCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhc
Confidence 455555555433222 233344443 3333 9999999999999999999 8899999999 788887775
Q ss_pred -CCCCeEEEEccCCC-CCCC--CcEEEe
Q 046346 185 -DLVNLKYVGGDMFK-AISP--ADAVVL 208 (209)
Q Consensus 185 -~~~ri~~~~gD~~~-~~p~--~D~~~l 208 (209)
..++++++.+|+.+ +++. +|+|+.
T Consensus 90 ~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 117 (219)
T 3dlc_A 90 NLNDRIQIVQGDVHNIPIEDNYADLIVS 117 (219)
T ss_dssp TCTTTEEEEECBTTBCSSCTTCEEEEEE
T ss_pred cccCceEEEEcCHHHCCCCcccccEEEE
Confidence 24689999999987 6653 899975
No 26
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.81 E-value=7.4e-09 Score=82.93 Aligned_cols=67 Identities=10% Similarity=0.074 Sum_probs=57.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCCCC--C-CcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKAIS--P-ADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~~p--~-~D~~~l 208 (209)
.+..+|+|||||+|.+++.+++.+|..+++.+|+ |..++.|++ ..+||++..+|.++.++ . +|++++
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Ivi 96 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVI 96 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEE
Confidence 4568999999999999999999999999999999 778887774 45789999999998654 2 898864
No 27
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.81 E-value=2.3e-08 Score=79.68 Aligned_cols=76 Identities=12% Similarity=0.178 Sum_probs=60.2
Q ss_pred HHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCC-CCC
Q 046346 130 TSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFK-AIS 201 (209)
Q Consensus 130 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~-~~p 201 (209)
...+++.+. ..+..+|||||||+|.++..+++++ +.+++++|+ +.+++.|++ ..++++++.+|+.+ +.+
T Consensus 25 ~~~l~~~~~--~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 101 (256)
T 1nkv_A 25 YATLGRVLR--MKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVAN 101 (256)
T ss_dssp HHHHHHHTC--CCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCS
T ss_pred HHHHHHhcC--CCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcC
Confidence 344555555 5667899999999999999999998 678999999 788887764 23689999999987 333
Q ss_pred C-CcEEEe
Q 046346 202 P-ADAVVL 208 (209)
Q Consensus 202 ~-~D~~~l 208 (209)
. +|+|+.
T Consensus 102 ~~fD~V~~ 109 (256)
T 1nkv_A 102 EKCDVAAC 109 (256)
T ss_dssp SCEEEEEE
T ss_pred CCCCEEEE
Confidence 4 899974
No 28
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.79 E-value=1.4e-08 Score=79.11 Aligned_cols=75 Identities=17% Similarity=0.157 Sum_probs=58.7
Q ss_pred HHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccC------C----CCeEEEEccCCC-C
Q 046346 132 VMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESD------L----VNLKYVGGDMFK-A 199 (209)
Q Consensus 132 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~------~----~ri~~~~gD~~~-~ 199 (209)
.+.+.+. ..+..+|||||||+|.++..+++++|..+++++|+ +.+++.|++. . .+++++.+|+.. +
T Consensus 20 ~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (217)
T 3jwh_A 20 GVVAALK--QSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQD 97 (217)
T ss_dssp HHHHHHH--HTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCC
T ss_pred HHHHHHH--hcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccc
Confidence 3344444 34568999999999999999999999999999999 7888877641 1 289999999865 3
Q ss_pred CC--CCcEEEe
Q 046346 200 IS--PADAVVL 208 (209)
Q Consensus 200 ~p--~~D~~~l 208 (209)
.+ .+|+|+.
T Consensus 98 ~~~~~fD~v~~ 108 (217)
T 3jwh_A 98 KRFHGYDAATV 108 (217)
T ss_dssp GGGCSCSEEEE
T ss_pred ccCCCcCEEee
Confidence 33 3999975
No 29
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.79 E-value=2.4e-08 Score=79.80 Aligned_cols=76 Identities=14% Similarity=0.198 Sum_probs=63.4
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHH-CCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCCCCC
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKA-FPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKAISP 202 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~~p~ 202 (209)
..++..++ ..+..+|||+|||+|.++..+++. .|..+++++|+ +.+++.|++ ..+|++++.+|+.+.+|.
T Consensus 83 ~~i~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 160 (255)
T 3mb5_A 83 ALIVAYAG--ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEE 160 (255)
T ss_dssp HHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCC
T ss_pred HHHHHhhC--CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCC
Confidence 44555555 566789999999999999999999 89999999999 788887774 356799999999987764
Q ss_pred --CcEEEe
Q 046346 203 --ADAVVL 208 (209)
Q Consensus 203 --~D~~~l 208 (209)
+|++++
T Consensus 161 ~~~D~v~~ 168 (255)
T 3mb5_A 161 ENVDHVIL 168 (255)
T ss_dssp CSEEEEEE
T ss_pred CCcCEEEE
Confidence 899875
No 30
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.78 E-value=4.3e-08 Score=78.92 Aligned_cols=75 Identities=23% Similarity=0.240 Sum_probs=60.9
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCC-CCCC
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFK-AISP 202 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~-~~p~ 202 (209)
..+++.++ .....+|||||||+|.++..+++++ ..+++++|+ +.+++.+++ ..++++++.+|+.+ ++|.
T Consensus 51 ~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 127 (273)
T 3bus_A 51 DEMIALLD--VRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFED 127 (273)
T ss_dssp HHHHHHSC--CCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCT
T ss_pred HHHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCC
Confidence 45566665 5677899999999999999999987 689999999 777777664 34689999999987 5553
Q ss_pred --CcEEEe
Q 046346 203 --ADAVVL 208 (209)
Q Consensus 203 --~D~~~l 208 (209)
+|+|+.
T Consensus 128 ~~fD~v~~ 135 (273)
T 3bus_A 128 ASFDAVWA 135 (273)
T ss_dssp TCEEEEEE
T ss_pred CCccEEEE
Confidence 899974
No 31
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.78 E-value=8.5e-09 Score=80.60 Aligned_cols=64 Identities=17% Similarity=0.237 Sum_probs=54.3
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----CCCCeEEEEccCCC-CCCC--CcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----DLVNLKYVGGDMFK-AISP--ADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~~~ri~~~~gD~~~-~~p~--~D~~~l 208 (209)
...+|||||||+|.++..+++++| +++++|+ |.+++.+++ ...+++++.+|+.+ ++|. +|+++.
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 109 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIF 109 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEE
Confidence 468999999999999999999988 8899999 788887774 24789999999987 5553 899875
No 32
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.77 E-value=5.3e-08 Score=75.45 Aligned_cols=75 Identities=15% Similarity=0.202 Sum_probs=59.1
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccCC-CCeEEEEccCCCCCCC--CcEE
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESDL-VNLKYVGGDMFKAISP--ADAV 206 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~-~ri~~~~gD~~~~~p~--~D~~ 206 (209)
..+++.+.. .....+|||||||+|.++..++++ ..+++++|+ +.+++.+++.. .+++++.+|+.+..+. +|++
T Consensus 35 ~~~~~~l~~-~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D~v 111 (218)
T 3ou2_A 35 PAALERLRA-GNIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWDAV 111 (218)
T ss_dssp HHHHHHHTT-TTSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEEEE
T ss_pred HHHHHHHhc-CCCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCceeEE
Confidence 344454432 445679999999999999999999 568999999 78888887633 7899999999875443 8999
Q ss_pred Ee
Q 046346 207 VL 208 (209)
Q Consensus 207 ~l 208 (209)
+.
T Consensus 112 ~~ 113 (218)
T 3ou2_A 112 FF 113 (218)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 33
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.77 E-value=1.6e-08 Score=78.87 Aligned_cols=76 Identities=14% Similarity=0.152 Sum_probs=59.2
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccC------C----CCeEEEEccCCC-
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESD------L----VNLKYVGGDMFK- 198 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~------~----~ri~~~~gD~~~- 198 (209)
..+.+.+. ..+..+|||||||+|.++..+++++|..+++++|+ +.+++.+++. . .+++++.+|+..
T Consensus 19 ~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 96 (219)
T 3jwg_A 19 GTVVAVLK--SVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYR 96 (219)
T ss_dssp HHHHHHHH--HTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSC
T ss_pred HHHHHHHh--hcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccc
Confidence 33444444 34568999999999999999999999999999999 7888877641 1 289999999965
Q ss_pred CCC--CCcEEEe
Q 046346 199 AIS--PADAVVL 208 (209)
Q Consensus 199 ~~p--~~D~~~l 208 (209)
+.+ .+|+|+.
T Consensus 97 ~~~~~~fD~V~~ 108 (219)
T 3jwg_A 97 DKRFSGYDAATV 108 (219)
T ss_dssp CGGGTTCSEEEE
T ss_pred ccccCCCCEEEE
Confidence 332 3999975
No 34
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.77 E-value=1.9e-08 Score=80.24 Aligned_cols=75 Identities=16% Similarity=0.208 Sum_probs=61.7
Q ss_pred HHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCCCCCC--CcEEEe
Q 046346 132 VMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFKAISP--ADAVVL 208 (209)
Q Consensus 132 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~~~p~--~D~~~l 208 (209)
.+++.+. .....+|||||||+|.++..+++++|..+++++|+ +.+++.+++...+++++.+|+.+..+. +|+|+.
T Consensus 24 ~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~ 101 (259)
T 2p35_A 24 DLLAQVP--LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWKPAQKADLLYA 101 (259)
T ss_dssp HHHTTCC--CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCCCSSCEEEEEE
T ss_pred HHHHhcC--CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcCccCCcCEEEE
Confidence 4455554 45678999999999999999999999999999999 788888876567899999999762233 899875
No 35
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.76 E-value=1.8e-08 Score=80.73 Aligned_cols=77 Identities=22% Similarity=0.340 Sum_probs=61.0
Q ss_pred hhHHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCC-CC
Q 046346 128 LATSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFK-AI 200 (209)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~-~~ 200 (209)
.....+++.++ .....+|||||||+|.++..++++++ +++++|+ +.+++.|++ ...+++++.+|+.+ ++
T Consensus 24 ~~~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~ 99 (260)
T 1vl5_A 24 SDLAKLMQIAA--LKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPF 99 (260)
T ss_dssp CCHHHHHHHHT--CCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCS
T ss_pred HHHHHHHHHhC--CCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCC
Confidence 34456666665 55778999999999999999999986 8999999 788887764 13589999999987 66
Q ss_pred CC--CcEEEe
Q 046346 201 SP--ADAVVL 208 (209)
Q Consensus 201 p~--~D~~~l 208 (209)
|. +|+|+.
T Consensus 100 ~~~~fD~V~~ 109 (260)
T 1vl5_A 100 TDERFHIVTC 109 (260)
T ss_dssp CTTCEEEEEE
T ss_pred CCCCEEEEEE
Confidence 63 899975
No 36
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.76 E-value=3.1e-08 Score=77.23 Aligned_cols=66 Identities=23% Similarity=0.272 Sum_probs=55.8
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCC-C--CCC--CcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFK-A--ISP--ADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~-~--~p~--~D~~~l 208 (209)
...+|||||||+|.++..+++++|+.+++++|+ +.+++.|++ ..++++++.+|+.+ + ++. +|++++
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~ 117 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYL 117 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEE
Confidence 467999999999999999999999999999999 788887764 13689999999986 3 443 899875
No 37
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.76 E-value=2.2e-08 Score=82.06 Aligned_cols=44 Identities=14% Similarity=0.239 Sum_probs=39.2
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES 184 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~ 184 (209)
+....+|||||||+|.++..+++++|..+++++|+ +.+++.|++
T Consensus 44 ~~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~ 88 (292)
T 3g07_A 44 WFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQ 88 (292)
T ss_dssp GTTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHH
T ss_pred hcCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 34578999999999999999999999999999999 788887764
No 38
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.76 E-value=2.7e-08 Score=80.03 Aligned_cols=73 Identities=18% Similarity=0.218 Sum_probs=59.0
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCC-CCCC--CcEE
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFK-AISP--ADAV 206 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~-~~p~--~D~~ 206 (209)
..+++.++ ..+..+|||||||+|.++..+++ |..+++++|+ |.+++.+++.. +++|+.+|+.+ ++|. +|+|
T Consensus 24 ~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~d~~~~~~~~~~fD~v 98 (261)
T 3ege_A 24 NAIINLLN--LPKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHP-QVEWFTGYAENLALPDKSVDGV 98 (261)
T ss_dssp HHHHHHHC--CCTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCT-TEEEECCCTTSCCSCTTCBSEE
T ss_pred HHHHHHhC--CCCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhcc-CCEEEECchhhCCCCCCCEeEE
Confidence 44455554 45678999999999999999997 7889999999 78888877433 99999999977 5553 9999
Q ss_pred Ee
Q 046346 207 VL 208 (209)
Q Consensus 207 ~l 208 (209)
+.
T Consensus 99 ~~ 100 (261)
T 3ege_A 99 IS 100 (261)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 39
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.76 E-value=3.9e-08 Score=80.27 Aligned_cols=77 Identities=18% Similarity=0.268 Sum_probs=60.0
Q ss_pred HHHHHhccc--cccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCC-CC
Q 046346 131 SVMIQKCKN--VFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFK-AI 200 (209)
Q Consensus 131 ~~~~~~~~~--~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~-~~ 200 (209)
..+++.++| .+....+|||||||+|.++..+++++ +.+++++|+ +.+++.|++ ..++++++.+|+.+ ++
T Consensus 68 ~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 146 (297)
T 2o57_A 68 EWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPC 146 (297)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS
T ss_pred HHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCC
Confidence 445555510 15667899999999999999999987 458999999 777877764 34789999999987 55
Q ss_pred CC--CcEEEe
Q 046346 201 SP--ADAVVL 208 (209)
Q Consensus 201 p~--~D~~~l 208 (209)
|. +|+|+.
T Consensus 147 ~~~~fD~v~~ 156 (297)
T 2o57_A 147 EDNSYDFIWS 156 (297)
T ss_dssp CTTCEEEEEE
T ss_pred CCCCEeEEEe
Confidence 53 899875
No 40
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.76 E-value=2.4e-08 Score=81.02 Aligned_cols=76 Identities=24% Similarity=0.278 Sum_probs=59.2
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHH-CCCCeEEEeec-hHHHhhccc---C---CCCeEEEEccCCCCCCC
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKA-FPKLECTCFDL-PHVVNGLES---D---LVNLKYVGGDMFKAISP 202 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~P~l~~~~~Dl-p~v~~~a~~---~---~~ri~~~~gD~~~~~p~ 202 (209)
..+++.++ ..+..+|||+|||+|.++..+++. +|..+++++|+ +.+++.|++ . .++++++.+|+.+++|.
T Consensus 100 ~~~~~~~~--~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~ 177 (275)
T 1yb2_A 100 SYIIMRCG--LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISD 177 (275)
T ss_dssp ------CC--CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCS
T ss_pred HHHHHHcC--CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcC
Confidence 34455555 566789999999999999999998 89999999999 788887764 1 25899999999887664
Q ss_pred --CcEEEe
Q 046346 203 --ADAVVL 208 (209)
Q Consensus 203 --~D~~~l 208 (209)
+|+|++
T Consensus 178 ~~fD~Vi~ 185 (275)
T 1yb2_A 178 QMYDAVIA 185 (275)
T ss_dssp CCEEEEEE
T ss_pred CCccEEEE
Confidence 899975
No 41
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.75 E-value=4e-08 Score=78.32 Aligned_cols=75 Identities=19% Similarity=0.213 Sum_probs=58.9
Q ss_pred HHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCC-CCCC-
Q 046346 132 VMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFK-AISP- 202 (209)
Q Consensus 132 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~-~~p~- 202 (209)
.+++.+. ...+..+|||||||+|.++..+++++|. +++++|+ +.+++.+++ ..+|++++.+|+.+ +++.
T Consensus 36 ~~l~~l~-~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 113 (257)
T 3f4k_A 36 KAVSFIN-ELTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNE 113 (257)
T ss_dssp HHHTTSC-CCCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTT
T ss_pred HHHHHHh-cCCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCC
Confidence 3444442 1455679999999999999999999997 9999999 778877664 35679999999966 5543
Q ss_pred -CcEEEe
Q 046346 203 -ADAVVL 208 (209)
Q Consensus 203 -~D~~~l 208 (209)
+|+|+.
T Consensus 114 ~fD~v~~ 120 (257)
T 3f4k_A 114 ELDLIWS 120 (257)
T ss_dssp CEEEEEE
T ss_pred CEEEEEe
Confidence 899975
No 42
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.75 E-value=2.9e-08 Score=79.29 Aligned_cols=75 Identities=13% Similarity=0.309 Sum_probs=60.5
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccCC---CCeEEEEccCCC-CCCC--C
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESDL---VNLKYVGGDMFK-AISP--A 203 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~---~ri~~~~gD~~~-~~p~--~ 203 (209)
..+++.++ ..+..+|||||||+|.++..+++++ ..+++++|+ +.+++.+++.. ++++++.+|+.+ ++|. +
T Consensus 45 ~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~f 121 (266)
T 3ujc_A 45 KKILSDIE--LNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNF 121 (266)
T ss_dssp HHHTTTCC--CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCE
T ss_pred HHHHHhcC--CCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcE
Confidence 34444444 5567899999999999999999998 779999999 78888877522 789999999987 5653 8
Q ss_pred cEEEe
Q 046346 204 DAVVL 208 (209)
Q Consensus 204 D~~~l 208 (209)
|+|+.
T Consensus 122 D~v~~ 126 (266)
T 3ujc_A 122 DLIYS 126 (266)
T ss_dssp EEEEE
T ss_pred EEEeH
Confidence 99975
No 43
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.75 E-value=2.2e-08 Score=81.55 Aligned_cols=68 Identities=16% Similarity=0.233 Sum_probs=57.3
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCC-CeEEEeec-hHHHhhccc----CCCCeEEEEccCCC-CCCC-CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPK-LECTCFDL-PHVVNGLES----DLVNLKYVGGDMFK-AISP-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~-l~~~~~Dl-p~v~~~a~~----~~~ri~~~~gD~~~-~~p~-~D~~~l 208 (209)
..+..+|||||||+|.++..+++.+|. .+++++|+ |.+++.+++ ...+++++.+|+.+ +.+. +|+|+.
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~ 95 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDKYDIAIC 95 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCSSCEEEEEE
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcCCCeeEEEE
Confidence 456789999999999999999999995 89999999 777877764 23489999999987 4555 999875
No 44
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.74 E-value=2.7e-08 Score=74.78 Aligned_cols=74 Identities=20% Similarity=0.330 Sum_probs=58.5
Q ss_pred HHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCCCC---
Q 046346 132 VMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKAIS--- 201 (209)
Q Consensus 132 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~~p--- 201 (209)
.+++.+. .....+|||||||+|.++..+++++|..+++++|+ +.+++.|++ ..+++ ++.+|..+.+|
T Consensus 16 ~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~ 92 (178)
T 3hm2_A 16 LAISALA--PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVP 92 (178)
T ss_dssp HHHHHHC--CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCC
T ss_pred HHHHHhc--ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccC
Confidence 3444444 45667999999999999999999999999999999 678887764 23488 88899876433
Q ss_pred -CCcEEEe
Q 046346 202 -PADAVVL 208 (209)
Q Consensus 202 -~~D~~~l 208 (209)
.+|++++
T Consensus 93 ~~~D~i~~ 100 (178)
T 3hm2_A 93 DNPDVIFI 100 (178)
T ss_dssp SCCSEEEE
T ss_pred CCCCEEEE
Confidence 3999985
No 45
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.74 E-value=2.4e-08 Score=77.72 Aligned_cols=76 Identities=18% Similarity=0.249 Sum_probs=61.9
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCC-CCCC
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAF-PKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFK-AISP 202 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~-~~p~ 202 (209)
..+++.++ .....+|||||||+|.++..+++.+ |..+++++|. +.+++.+++ ...+++++.+|+.+ +++.
T Consensus 27 ~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~ 104 (219)
T 3dh0_A 27 EKVLKEFG--LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPD 104 (219)
T ss_dssp HHHHHHHT--CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCS
T ss_pred HHHHHHhC--CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCC
Confidence 44556565 5667899999999999999999997 8889999999 788887764 23589999999987 5553
Q ss_pred --CcEEEe
Q 046346 203 --ADAVVL 208 (209)
Q Consensus 203 --~D~~~l 208 (209)
+|+|++
T Consensus 105 ~~fD~v~~ 112 (219)
T 3dh0_A 105 NTVDFIFM 112 (219)
T ss_dssp SCEEEEEE
T ss_pred CCeeEEEe
Confidence 899975
No 46
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.74 E-value=5.2e-08 Score=76.67 Aligned_cols=64 Identities=28% Similarity=0.381 Sum_probs=55.4
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCC-CCCC-CcEEE
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFK-AISP-ADAVV 207 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~-~~p~-~D~~~ 207 (209)
.+..+|||||||+|.++..++++++ +++++|+ +.+++.+++...+++++.+|+.+ +.+. +|+|+
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~D~v~ 105 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRLGRKFSAVV 105 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCSSCEEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcccCCCCcEEE
Confidence 4668999999999999999999987 7899999 88898888656789999999987 4444 89997
No 47
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.74 E-value=1.6e-08 Score=80.10 Aligned_cols=68 Identities=9% Similarity=0.254 Sum_probs=57.9
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCCCC----C-CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKAIS----P-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~~p----~-~D~~~l 208 (209)
..+..+|||||||+|..+..+++.+|..+++.+|+ +.+++.|++ ..++|+++.+|+.+.+| . +|+|++
T Consensus 69 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 148 (232)
T 3ntv_A 69 MNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFI 148 (232)
T ss_dssp HHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEE
T ss_pred hcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEE
Confidence 34678999999999999999999999999999999 788887775 24699999999987444 3 899975
No 48
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.73 E-value=2.7e-08 Score=80.33 Aligned_cols=64 Identities=17% Similarity=0.268 Sum_probs=54.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCC-CCCC--CcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFK-AISP--ADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~-~~p~--~D~~~l 208 (209)
....+|||||||+|.++..|++++. +++++|. +.+++.|+ ...+|+++.+|+.+ ++|. +|+|+.
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~~--~v~gvD~s~~ml~~a~-~~~~v~~~~~~~e~~~~~~~sfD~v~~ 105 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFFE--RVHAVDPGEAQIRQAL-RHPRVTYAVAPAEDTGLPPASVDVAIA 105 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTCS--EEEEEESCHHHHHTCC-CCTTEEEEECCTTCCCCCSSCEEEEEE
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhCC--EEEEEeCcHHhhhhhh-hcCCceeehhhhhhhcccCCcccEEEE
Confidence 4567999999999999999999874 6889999 78899887 46799999999976 6664 899975
No 49
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.73 E-value=4.1e-08 Score=78.99 Aligned_cols=67 Identities=16% Similarity=0.181 Sum_probs=56.5
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCC-CCCC--CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFK-AISP--ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~-~~p~--~D~~~l 208 (209)
..+..+|||||||+|.++..+++. |..+++++|+ +.+++.|++ ..++++++.+|+.+ +++. +|+|+.
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~ 120 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWS 120 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEE
Confidence 456789999999999999999998 8889999999 788887764 34789999999976 5443 899975
No 50
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.73 E-value=8.9e-08 Score=78.97 Aligned_cols=85 Identities=12% Similarity=0.056 Sum_probs=63.5
Q ss_pred HHhhhHhhHHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEc
Q 046346 122 MASDARLATSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGG 194 (209)
Q Consensus 122 m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~g 194 (209)
+..........+++.++. +.+..+|||||||+|.++..+++++ ..+++++|+ +.+++.|++ ..++++++.+
T Consensus 97 ~~~~~~~~~~~l~~~l~~-~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~ 174 (312)
T 3vc1_A 97 LHRLESAQAEFLMDHLGQ-AGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVC 174 (312)
T ss_dssp HHHHHHHHHHHHHTTSCC-CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC
T ss_pred hhhHHHHHHHHHHHHhcc-CCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEEC
Confidence 333333333455555541 4567899999999999999999986 678999999 788887764 3468999999
Q ss_pred cCCC-CCCC--CcEEEe
Q 046346 195 DMFK-AISP--ADAVVL 208 (209)
Q Consensus 195 D~~~-~~p~--~D~~~l 208 (209)
|+.+ +++. +|+|+.
T Consensus 175 d~~~~~~~~~~fD~V~~ 191 (312)
T 3vc1_A 175 NMLDTPFDKGAVTASWN 191 (312)
T ss_dssp CTTSCCCCTTCEEEEEE
T ss_pred ChhcCCCCCCCEeEEEE
Confidence 9987 5553 999975
No 51
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.72 E-value=5.3e-08 Score=79.82 Aligned_cols=74 Identities=14% Similarity=0.143 Sum_probs=60.4
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCCCCC-
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKAISP- 202 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~~p~- 202 (209)
..+++.++ ..+..+|||||||+|.++..++++++ .+++++|+ +.+++.|++ ..++++++.+|+.+- +.
T Consensus 62 ~~~~~~~~--~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~ 137 (302)
T 3hem_A 62 KLALDKLN--LEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-DEP 137 (302)
T ss_dssp HHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-CCC
T ss_pred HHHHHHcC--CCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-CCC
Confidence 44566665 56778999999999999999999988 89999999 788887764 345899999999654 55
Q ss_pred CcEEEe
Q 046346 203 ADAVVL 208 (209)
Q Consensus 203 ~D~~~l 208 (209)
+|+|+.
T Consensus 138 fD~v~~ 143 (302)
T 3hem_A 138 VDRIVS 143 (302)
T ss_dssp CSEEEE
T ss_pred ccEEEE
Confidence 999875
No 52
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.71 E-value=4.2e-08 Score=83.42 Aligned_cols=75 Identities=19% Similarity=0.286 Sum_probs=61.3
Q ss_pred HHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------C--CCCeEEEEccCCCCCCC
Q 046346 132 VMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------D--LVNLKYVGGDMFKAISP 202 (209)
Q Consensus 132 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~--~~ri~~~~gD~~~~~p~ 202 (209)
.+++.++ .....+|||+|||+|.++..+++++|..+++++|. +.+++.+++ . ..+++|+.+|++++++.
T Consensus 213 ~ll~~l~--~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~ 290 (375)
T 4dcm_A 213 FFMQHLP--ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 290 (375)
T ss_dssp HHHHTCC--CSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCT
T ss_pred HHHHhCc--ccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCC
Confidence 4556565 33458999999999999999999999999999999 778887764 1 13689999999997764
Q ss_pred --CcEEEe
Q 046346 203 --ADAVVL 208 (209)
Q Consensus 203 --~D~~~l 208 (209)
+|+|++
T Consensus 291 ~~fD~Ii~ 298 (375)
T 4dcm_A 291 FRFNAVLC 298 (375)
T ss_dssp TCEEEEEE
T ss_pred CCeeEEEE
Confidence 999985
No 53
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.71 E-value=8e-08 Score=74.68 Aligned_cols=72 Identities=17% Similarity=0.210 Sum_probs=57.7
Q ss_pred HHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCC---CCC
Q 046346 133 MIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKA---ISP 202 (209)
Q Consensus 133 ~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~---~p~ 202 (209)
++..++ .....+|||||||+|.++..++++ ..+++++|+ +.+++.|++ ..++++++.+|+.+. .+.
T Consensus 47 ~l~~l~--~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~ 122 (204)
T 3njr_A 47 TLAALA--PRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPL 122 (204)
T ss_dssp HHHHHC--CCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCC
T ss_pred HHHhcC--CCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCC
Confidence 344444 556789999999999999999998 788999999 788887774 234899999999873 345
Q ss_pred CcEEEe
Q 046346 203 ADAVVL 208 (209)
Q Consensus 203 ~D~~~l 208 (209)
+|++++
T Consensus 123 ~D~v~~ 128 (204)
T 3njr_A 123 PEAVFI 128 (204)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 999875
No 54
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.70 E-value=1.3e-07 Score=76.95 Aligned_cols=56 Identities=18% Similarity=0.303 Sum_probs=50.1
Q ss_pred CCCeEEEecCCc---cHHHHHHHHHCCCCeEEEeec-hHHHhhccc---CCCCeEEEEccCCC
Q 046346 143 GLNSLVDVGGGT---GTAAKAIAKAFPKLECTCFDL-PHVVNGLES---DLVNLKYVGGDMFK 198 (209)
Q Consensus 143 ~~~~vlDvGgG~---G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~---~~~ri~~~~gD~~~ 198 (209)
+..+|||||||+ |.++..+.+.+|+.+++.+|+ |.+++.|++ ..++++++.+|+++
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~ 139 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRD 139 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCC
Confidence 458999999999 999888889999999999999 899998885 24789999999986
No 55
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.70 E-value=6.2e-08 Score=78.60 Aligned_cols=66 Identities=27% Similarity=0.395 Sum_probs=56.4
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCCCCC-C-CcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFKAIS-P-ADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~~~p-~-~D~~~l 208 (209)
+..+|||||||+|.++..+++.+|+.+++++|. +.+++.+++ ...+++++.+|++++++ . +|+|+.
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~fD~Iv~ 182 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMIVS 182 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTTCCEEEEEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcccCCccEEEE
Confidence 457999999999999999999999999999999 788887764 22489999999998663 3 999975
No 56
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.70 E-value=4.6e-08 Score=80.12 Aligned_cols=67 Identities=24% Similarity=0.267 Sum_probs=56.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHHhhccc----C---CCCeEEEEccCCC-CCC-------C-C
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAF-PKLECTCFDL-PHVVNGLES----D---LVNLKYVGGDMFK-AIS-------P-A 203 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~-P~l~~~~~Dl-p~v~~~a~~----~---~~ri~~~~gD~~~-~~p-------~-~ 203 (209)
.+..+|||||||+|.++..+++++ |..+++++|+ +.+++.|++ . ..+++++.+|+.+ +++ . +
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 467899999999999999999998 8999999999 788888765 2 6799999999987 322 3 8
Q ss_pred cEEEe
Q 046346 204 DAVVL 208 (209)
Q Consensus 204 D~~~l 208 (209)
|+|+.
T Consensus 115 D~V~~ 119 (299)
T 3g5t_A 115 DMITA 119 (299)
T ss_dssp EEEEE
T ss_pred eEEeH
Confidence 99875
No 57
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.70 E-value=2.3e-08 Score=77.66 Aligned_cols=66 Identities=11% Similarity=0.029 Sum_probs=54.0
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccC-----------------CCCeEEEEccCCC-CCC
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESD-----------------LVNLKYVGGDMFK-AIS 201 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~-----------------~~ri~~~~gD~~~-~~p 201 (209)
.....+|||||||+|..+..++++ ..+++++|+ +.+++.|++. ..+++++.+|+++ +.+
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 456789999999999999999998 568999999 7888887641 3589999999987 432
Q ss_pred ---CCcEEEe
Q 046346 202 ---PADAVVL 208 (209)
Q Consensus 202 ---~~D~~~l 208 (209)
.+|+|+.
T Consensus 98 ~~~~fD~v~~ 107 (203)
T 1pjz_A 98 DIGHCAAFYD 107 (203)
T ss_dssp HHHSEEEEEE
T ss_pred cCCCEEEEEE
Confidence 3899873
No 58
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.69 E-value=4.4e-08 Score=79.07 Aligned_cols=68 Identities=21% Similarity=0.440 Sum_probs=57.8
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCC-CCCC--CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFK-AISP--ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~-~~p~--~D~~~l 208 (209)
+.+..+|||||||+|.++..+++++|..+++++|. +.+++.+++ ..++++++.+|+.+ +++. +|+|+.
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 111 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFV 111 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEE
Confidence 45678999999999999999999999999999999 788887764 23589999999987 4443 899975
No 59
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.69 E-value=4.3e-08 Score=73.93 Aligned_cols=60 Identities=22% Similarity=0.308 Sum_probs=51.6
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCCCCC-C-CcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFKAIS-P-ADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~~~p-~-~D~~~l 208 (209)
....+|||||||+|.++..++++. +++++|+ +.+++. ..+++++.+|++++++ . +|+++.
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~----~~~~~~~~~d~~~~~~~~~fD~i~~ 84 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES----HRGGNLVRADLLCSINQESVDVVVF 84 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT----CSSSCEEECSTTTTBCGGGCSEEEE
T ss_pred CCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc----ccCCeEEECChhhhcccCCCCEEEE
Confidence 345699999999999999999998 8999999 677776 5689999999998766 3 999875
No 60
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.69 E-value=5.4e-08 Score=75.14 Aligned_cols=65 Identities=26% Similarity=0.301 Sum_probs=54.7
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCCCCC-C-CcEEEe
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFKAIS-P-ADAVVL 208 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~~~p-~-~D~~~l 208 (209)
..+|||||||+|.++..+++.+|..+++++|. +.+++.+++ ...+++++.+|+.+..| . +|+++.
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~ 138 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVIS 138 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEEC
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEE
Confidence 67999999999999999999999999999999 778877764 12459999999987443 3 899874
No 61
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.67 E-value=4.5e-08 Score=76.57 Aligned_cols=66 Identities=23% Similarity=0.307 Sum_probs=54.4
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCC-C--CCC--CcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFK-A--ISP--ADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~-~--~p~--~D~~~l 208 (209)
...+|||||||+|.++..+++++|+.+++++|+ +.+++.|++ ...+++++.+|+.+ + ++. +|.+++
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~ 114 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYL 114 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEE
Confidence 457899999999999999999999999999999 778877764 23679999999876 2 443 787754
No 62
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.67 E-value=8.1e-08 Score=76.48 Aligned_cols=74 Identities=18% Similarity=0.143 Sum_probs=59.1
Q ss_pred HHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccC--CCCeEEEEccCCC-CCCC--CcE
Q 046346 132 VMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESD--LVNLKYVGGDMFK-AISP--ADA 205 (209)
Q Consensus 132 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~--~~ri~~~~gD~~~-~~p~--~D~ 205 (209)
.+.+.++ .....+|||||||+|.++..++++.+. +++++|+ +.+++.+++. ..+++++.+|+.+ +++. +|+
T Consensus 35 ~l~~~~~--~~~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 111 (253)
T 3g5l_A 35 ELKKMLP--DFNQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNV 111 (253)
T ss_dssp HHHTTCC--CCTTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEE
T ss_pred HHHHhhh--ccCCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEE
Confidence 3444444 346789999999999999999999776 8999999 7888888752 4789999999976 5543 899
Q ss_pred EEe
Q 046346 206 VVL 208 (209)
Q Consensus 206 ~~l 208 (209)
|+.
T Consensus 112 v~~ 114 (253)
T 3g5l_A 112 VLS 114 (253)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
No 63
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.67 E-value=5.5e-08 Score=75.70 Aligned_cols=74 Identities=14% Similarity=0.232 Sum_probs=59.1
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccCC-CCeEEEEccCCC-CCCC-CcEE
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESDL-VNLKYVGGDMFK-AISP-ADAV 206 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~-~ri~~~~gD~~~-~~p~-~D~~ 206 (209)
..+++.+. .....+|||||||+|.++..++++ ..+++++|. +.+++.+++.. .+++++.+|+.+ +.+. +|++
T Consensus 35 ~~~l~~~~--~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~fD~v 110 (220)
T 3hnr_A 35 EDILEDVV--NKSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVPTSIDTI 110 (220)
T ss_dssp HHHHHHHH--HTCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCCSCCSEE
T ss_pred HHHHHHhh--ccCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCCCCeEEE
Confidence 34555554 446789999999999999999998 568999999 78888887633 589999999987 4544 9999
Q ss_pred Ee
Q 046346 207 VL 208 (209)
Q Consensus 207 ~l 208 (209)
+.
T Consensus 111 ~~ 112 (220)
T 3hnr_A 111 VS 112 (220)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 64
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.67 E-value=6.1e-09 Score=80.49 Aligned_cols=67 Identities=24% Similarity=0.289 Sum_probs=46.1
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccC----CCCeEEEEccCCCCCC------C-CcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESD----LVNLKYVGGDMFKAIS------P-ADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~----~~ri~~~~gD~~~~~p------~-~D~~~l 208 (209)
.+..+|||+|||+|.++..+++++|+.+++++|+ +.+++.+++. ..+++++.+|++++++ . +|+++.
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 107 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVS 107 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEE
Confidence 5678999999999999999999999999999999 7888887752 1178999999887433 3 899875
No 65
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.66 E-value=3.8e-08 Score=84.25 Aligned_cols=76 Identities=17% Similarity=0.211 Sum_probs=60.1
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-------------C-CCCeEEEEcc
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-------------D-LVNLKYVGGD 195 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-------------~-~~ri~~~~gD 195 (209)
..+++.+. .....+|||||||+|.++..+++.++..+++++|+ +.+++.|+. . .++|+|+.||
T Consensus 163 ~~il~~l~--l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD 240 (438)
T 3uwp_A 163 AQMIDEIK--MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGD 240 (438)
T ss_dssp HHHHHHHC--CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECC
T ss_pred HHHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECc
Confidence 44555555 66778999999999999999999998878999999 566666542 1 3789999999
Q ss_pred CCC-CC----CCCcEEEe
Q 046346 196 MFK-AI----SPADAVVL 208 (209)
Q Consensus 196 ~~~-~~----p~~D~~~l 208 (209)
+++ ++ +.+|+|++
T Consensus 241 ~~~lp~~d~~~~aDVVf~ 258 (438)
T 3uwp_A 241 FLSEEWRERIANTSVIFV 258 (438)
T ss_dssp TTSHHHHHHHHTCSEEEE
T ss_pred ccCCccccccCCccEEEE
Confidence 998 44 34899875
No 66
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.66 E-value=7.9e-08 Score=75.78 Aligned_cols=93 Identities=14% Similarity=0.043 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHhhhH----hhHHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccC--
Q 046346 113 KLNNFFNEAMASDAR----LATSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESD-- 185 (209)
Q Consensus 113 ~~~~~f~~~m~~~~~----~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~-- 185 (209)
+....|...+..... ...+.+.+.++ .....+|||||||+|.++..++++.+ .+++++|+ +.+++.+++.
T Consensus 11 ~~~~~y~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~ 87 (243)
T 3bkw_A 11 DFFAGYSQLGRSIEGLDGAAEWPALRAMLP--EVGGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGP 87 (243)
T ss_dssp --------------CGGGCTTHHHHHHHSC--CCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSC
T ss_pred HHHHHHHHhccCCccHHHHHhHHHHHHhcc--ccCCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhcc
Confidence 344555555443221 22234555555 44678999999999999999999843 38999999 7888887752
Q ss_pred CCCeEEEEccCCC-CCCC--CcEEEe
Q 046346 186 LVNLKYVGGDMFK-AISP--ADAVVL 208 (209)
Q Consensus 186 ~~ri~~~~gD~~~-~~p~--~D~~~l 208 (209)
..+++++.+|+.+ +++. +|+|+.
T Consensus 88 ~~~~~~~~~d~~~~~~~~~~fD~v~~ 113 (243)
T 3bkw_A 88 DTGITYERADLDKLHLPQDSFDLAYS 113 (243)
T ss_dssp SSSEEEEECCGGGCCCCTTCEEEEEE
T ss_pred cCCceEEEcChhhccCCCCCceEEEE
Confidence 3479999999977 4543 899875
No 67
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.66 E-value=8.4e-08 Score=74.77 Aligned_cols=67 Identities=18% Similarity=0.200 Sum_probs=51.8
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhh----ccc-----CCCCeEEEEccCCC-CCCC-CcEEE
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNG----LES-----DLVNLKYVGGDMFK-AISP-ADAVV 207 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~----a~~-----~~~ri~~~~gD~~~-~~p~-~D~~~ 207 (209)
..+..+|||||||+|.++..+++++|..+++++|+ +.+++. +++ ..++++++.+|+.+ +++. .|.++
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~d~v~ 103 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGVGELH 103 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCEEEEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCCCEEE
Confidence 45678999999999999999999999999999999 565553 221 23589999999987 4432 25543
No 68
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.66 E-value=6e-08 Score=78.58 Aligned_cols=75 Identities=20% Similarity=0.224 Sum_probs=61.0
Q ss_pred HHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCC-CCCC-CcEE
Q 046346 130 TSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFK-AISP-ADAV 206 (209)
Q Consensus 130 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~-~~p~-~D~~ 206 (209)
...+++.+. ..+..+|||||||+|.++..+++ |..+++++|+ +.+++.+++...+++++.+|+.+ +.+. +|+|
T Consensus 46 ~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v 121 (279)
T 3ccf_A 46 GEDLLQLLN--PQPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRVDKPLDAV 121 (279)
T ss_dssp CCHHHHHHC--CCTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCSSCEEEE
T ss_pred HHHHHHHhC--CCCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCcCCCcCEE
Confidence 344555555 45678999999999999999999 7889999999 78888887655789999999977 4444 8998
Q ss_pred Ee
Q 046346 207 VL 208 (209)
Q Consensus 207 ~l 208 (209)
+.
T Consensus 122 ~~ 123 (279)
T 3ccf_A 122 FS 123 (279)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 69
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.66 E-value=6.8e-08 Score=76.86 Aligned_cols=66 Identities=14% Similarity=0.086 Sum_probs=55.8
Q ss_pred CCCeEEEecCCccHHHHHHHHH----CCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCCC--CC-----CCcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKA----FPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFKA--IS-----PADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~----~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~~--~p-----~~D~~~l 208 (209)
...+|||||||+|..+..+++. +|+.+++.+|+ |.+++.|+...++|+++.+|+.+. +| .+|++++
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~ 158 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFI 158 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEE
Confidence 3579999999999999999998 79999999999 788888875568999999999873 22 2899875
No 70
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.65 E-value=5.2e-08 Score=77.86 Aligned_cols=66 Identities=14% Similarity=0.060 Sum_probs=54.9
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccC----CCCCC----C-CcEE
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDM----FKAIS----P-ADAV 206 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~----~~~~p----~-~D~~ 206 (209)
...+|||||||+|.++..+++++|+.+++++|+ +.+++.|++ ..+|++++.+|. +++++ . +|+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 467999999999999999999999999999999 788888774 345799999994 33454 3 8998
Q ss_pred Ee
Q 046346 207 VL 208 (209)
Q Consensus 207 ~l 208 (209)
+.
T Consensus 145 ~~ 146 (254)
T 2h00_A 145 MC 146 (254)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 71
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.65 E-value=4.7e-08 Score=73.49 Aligned_cols=73 Identities=21% Similarity=0.254 Sum_probs=58.1
Q ss_pred HHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCCCCC--CC
Q 046346 132 VMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFKAIS--PA 203 (209)
Q Consensus 132 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~~~p--~~ 203 (209)
.+++.++ .....+|||||||+|.++..+++ +..+++++|. +.+++.+++ ..++++++.+|+.+++| .+
T Consensus 26 ~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 101 (183)
T 2yxd_A 26 VSIGKLN--LNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDKLEF 101 (183)
T ss_dssp HHHHHHC--CCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGGCCC
T ss_pred HHHHHcC--CCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccCCCC
Confidence 3444444 45668999999999999999998 8889999998 778887764 12689999999987655 38
Q ss_pred cEEEe
Q 046346 204 DAVVL 208 (209)
Q Consensus 204 D~~~l 208 (209)
|+++.
T Consensus 102 D~i~~ 106 (183)
T 2yxd_A 102 NKAFI 106 (183)
T ss_dssp SEEEE
T ss_pred cEEEE
Confidence 99985
No 72
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.64 E-value=1.5e-07 Score=72.66 Aligned_cols=66 Identities=18% Similarity=0.245 Sum_probs=53.9
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCCCCCC-CcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFKAISP-ADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~~~p~-~D~~~l 208 (209)
....+|||||||+|.++..+++ +|..+++++|+ +.+++.|++ ...+++++.+|+.+..+. +|+++.
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~ 131 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHK-LGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVA 131 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEE
Confidence 4568999999999999999776 57789999999 788887764 122499999999886555 999875
No 73
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.64 E-value=1.3e-07 Score=76.75 Aligned_cols=74 Identities=16% Similarity=0.217 Sum_probs=58.6
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCCCCC-
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKAISP- 202 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~~p~- 202 (209)
..+++.++ ..+..+|||||||+|.++..++++++. +++++|+ +.+++.+++ ..++++++.+|+. ++|.
T Consensus 54 ~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~ 129 (287)
T 1kpg_A 54 DLALGKLG--LQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWE-QFDEP 129 (287)
T ss_dssp HHHHTTTT--CCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGG-GCCCC
T ss_pred HHHHHHcC--CCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChh-hCCCC
Confidence 44555555 566789999999999999999988765 9999999 788877764 2468999999995 4445
Q ss_pred CcEEEe
Q 046346 203 ADAVVL 208 (209)
Q Consensus 203 ~D~~~l 208 (209)
+|+|+.
T Consensus 130 fD~v~~ 135 (287)
T 1kpg_A 130 VDRIVS 135 (287)
T ss_dssp CSEEEE
T ss_pred eeEEEE
Confidence 999875
No 74
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.64 E-value=4.2e-08 Score=75.59 Aligned_cols=66 Identities=18% Similarity=0.183 Sum_probs=53.6
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----C--CCCeEEEEccCCCC-CCC-CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----D--LVNLKYVGGDMFKA-ISP-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~--~~ri~~~~gD~~~~-~p~-~D~~~l 208 (209)
.....+|||+|||+|.++..++...|+.+++..|+ +.+++.+++ . ..++++ .|..+. .|+ +|++++
T Consensus 47 l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa 121 (200)
T 3fzg_A 47 IKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFL 121 (200)
T ss_dssp SCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEE
T ss_pred cCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhH
Confidence 35689999999999999999999999999999999 788888775 2 235666 777664 444 899974
No 75
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.63 E-value=1.1e-07 Score=75.39 Aligned_cols=76 Identities=21% Similarity=0.367 Sum_probs=60.2
Q ss_pred hHHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCC-CCC
Q 046346 129 ATSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFK-AIS 201 (209)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~-~~p 201 (209)
....+++.++ .....+|||||||+|.++..+++.++ +++++|+ +.+++.+++ ...+++++.+|+.+ +++
T Consensus 9 ~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 84 (239)
T 1xxl_A 9 SLGLMIKTAE--CRAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFP 84 (239)
T ss_dssp HHHHHHHHHT--CCTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSC
T ss_pred CcchHHHHhC--cCCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCC
Confidence 3445566666 66788999999999999999999986 7899999 778877764 23689999999976 554
Q ss_pred C--CcEEEe
Q 046346 202 P--ADAVVL 208 (209)
Q Consensus 202 ~--~D~~~l 208 (209)
. +|+|+.
T Consensus 85 ~~~fD~v~~ 93 (239)
T 1xxl_A 85 DDSFDIITC 93 (239)
T ss_dssp TTCEEEEEE
T ss_pred CCcEEEEEE
Confidence 3 899975
No 76
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.63 E-value=6.3e-08 Score=79.60 Aligned_cols=68 Identities=13% Similarity=0.185 Sum_probs=56.2
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCC-CCCCCcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFK-AISPADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~-~~p~~D~~~l 208 (209)
.....+|||||||+|.++..++.+.|+.+++++|+ |++++.|++ ..++|+|+.+|+.+ +-..+|++++
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~~ 194 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLMV 194 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEEE
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEEE
Confidence 56789999999999988877777788999999999 899988875 12799999999976 3123999985
No 77
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.63 E-value=1.6e-07 Score=82.34 Aligned_cols=76 Identities=13% Similarity=0.128 Sum_probs=60.7
Q ss_pred HHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc------CCCCeEEEEccCCC-CCCC
Q 046346 130 TSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES------DLVNLKYVGGDMFK-AISP 202 (209)
Q Consensus 130 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~------~~~ri~~~~gD~~~-~~p~ 202 (209)
...+++.+. .....+|||||||+|.++..+++ .|..+++++|+.++++.|++ ..++|+++.+|+.+ ++|.
T Consensus 147 ~~~il~~l~--~~~~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~ 223 (480)
T 3b3j_A 147 QRAILQNHT--DFKDKIVLDVGCGSGILSFFAAQ-AGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPE 223 (480)
T ss_dssp HHHHHHTGG--GTTTCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSS
T ss_pred HHHHHHhhh--hcCCCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccCC
Confidence 344555554 44568999999999999998887 68889999999777777664 34799999999988 6676
Q ss_pred -CcEEEe
Q 046346 203 -ADAVVL 208 (209)
Q Consensus 203 -~D~~~l 208 (209)
+|+|+.
T Consensus 224 ~fD~Ivs 230 (480)
T 3b3j_A 224 QVDIIIS 230 (480)
T ss_dssp CEEEEEC
T ss_pred CeEEEEE
Confidence 999975
No 78
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.62 E-value=4.3e-08 Score=77.14 Aligned_cols=66 Identities=23% Similarity=0.275 Sum_probs=54.0
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCCC----CCC--CcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFKA----ISP--ADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~~----~p~--~D~~~l 208 (209)
...+|||||||+|.++..+++++|+.+++++|+ +.+++.|++ ...+++++.+|+.+- +|. +|.+++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~ 111 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQL 111 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEE
Confidence 468999999999999999999999999999999 677777654 245799999997652 443 787764
No 79
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.62 E-value=5.2e-08 Score=80.89 Aligned_cols=65 Identities=18% Similarity=0.265 Sum_probs=56.0
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCC---CCC-C-CcEEEe
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFK---AIS-P-ADAVVL 208 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~---~~p-~-~D~~~l 208 (209)
..+|||||||+|.++..+++++|+.+++++|+ |.+++.|++ ..+|++++.+|.++ ..+ . +|+|++
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~ 165 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIR 165 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEE
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEE
Confidence 34999999999999999999999999999999 889998886 24699999999775 344 3 999985
No 80
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.61 E-value=7.6e-08 Score=78.78 Aligned_cols=88 Identities=15% Similarity=0.238 Sum_probs=59.2
Q ss_pred HHHHHHHHhh-hHhhHHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----CC---
Q 046346 116 NFFNEAMASD-ARLATSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----DL--- 186 (209)
Q Consensus 116 ~~f~~~m~~~-~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~~--- 186 (209)
..|...+... .......+++.++ ....+|||||||+|.++..++++ ..+++++|+ +.+++.|++ ..
T Consensus 57 ~~y~~~~~~~~~~~~~~~~~~~~~---~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~ 131 (299)
T 3g2m_A 57 DTYRDLIQDADGTSEAREFATRTG---PVSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADV 131 (299)
T ss_dssp ---------CCCHHHHHHHHHHHC---CCCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHhcccCccHHHHHHHHhhC---CCCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhccccc
Confidence 3344444432 2233445555554 23459999999999999999998 567999999 788888775 12
Q ss_pred -CCeEEEEccCCC-CCCC-CcEEEe
Q 046346 187 -VNLKYVGGDMFK-AISP-ADAVVL 208 (209)
Q Consensus 187 -~ri~~~~gD~~~-~~p~-~D~~~l 208 (209)
.+++++.+|+.+ +.+. +|+|++
T Consensus 132 ~~~v~~~~~d~~~~~~~~~fD~v~~ 156 (299)
T 3g2m_A 132 RDRCTLVQGDMSAFALDKRFGTVVI 156 (299)
T ss_dssp HTTEEEEECBTTBCCCSCCEEEEEE
T ss_pred ccceEEEeCchhcCCcCCCcCEEEE
Confidence 689999999987 5555 998874
No 81
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.59 E-value=2.7e-08 Score=81.80 Aligned_cols=68 Identities=16% Similarity=0.154 Sum_probs=57.2
Q ss_pred ccCCCeEEEecCCccHHHHHHH-HHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCC-CCCC-CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIA-KAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFK-AISP-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~-~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~-~~p~-~D~~~l 208 (209)
..+..+|||||||+|.++..++ ..+|+.+++++|+ +.+++.|++ ..+|++++.+|+.+ +.+. +|+|+.
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~ 193 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTS 193 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEEC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEE
Confidence 4567899999999999999996 7899999999999 788887775 24579999999987 4445 999975
No 82
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.59 E-value=1.2e-07 Score=76.87 Aligned_cols=76 Identities=17% Similarity=0.210 Sum_probs=62.2
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHH-CCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCCCCC
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKA-FPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKAISP 202 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~~p~ 202 (209)
..++..++ .....+|||+|||+|.++..++++ .|..+++++|+ +.+++.|++ ..+++++..+|+.+.+|.
T Consensus 102 ~~i~~~~~--~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 179 (277)
T 1o54_A 102 SFIAMMLD--VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDE 179 (277)
T ss_dssp HHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSC
T ss_pred HHHHHHhC--CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccC
Confidence 44555555 566789999999999999999999 78999999998 788887764 126899999999886653
Q ss_pred --CcEEEe
Q 046346 203 --ADAVVL 208 (209)
Q Consensus 203 --~D~~~l 208 (209)
+|++++
T Consensus 180 ~~~D~V~~ 187 (277)
T 1o54_A 180 KDVDALFL 187 (277)
T ss_dssp CSEEEEEE
T ss_pred CccCEEEE
Confidence 899985
No 83
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.59 E-value=1.7e-07 Score=72.24 Aligned_cols=67 Identities=16% Similarity=0.186 Sum_probs=55.5
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccC---CCCeEEEEccCCC-CCCC--CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESD---LVNLKYVGGDMFK-AISP--ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~---~~ri~~~~gD~~~-~~p~--~D~~~l 208 (209)
.....+|||||||+|.++..++++.+. +++++|+ +.+++.+++. ..+++++.+|+.+ +++. +|+|+.
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~ 113 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLE 113 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEE
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEE
Confidence 356789999999999999999999776 8999999 7888877752 3689999999987 5553 899974
No 84
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.59 E-value=1.8e-07 Score=74.53 Aligned_cols=66 Identities=14% Similarity=0.196 Sum_probs=54.2
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccC----CCCeEEEEccCCC-CCCC--CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESD----LVNLKYVGGDMFK-AISP--ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~----~~ri~~~~gD~~~-~~p~--~D~~~l 208 (209)
..+..+|||||||+|.++..++++ ..+++++|. +.+++.+++. ..+++++.+|+.+ +++. +|+++.
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 110 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIV 110 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEE
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEE
Confidence 456789999999999999999987 568999999 7888877642 5789999999976 4443 899875
No 85
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.59 E-value=1.4e-07 Score=74.44 Aligned_cols=67 Identities=19% Similarity=0.262 Sum_probs=54.4
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc---CCCCeEEEEccCCC-----CCCC-CcEEE
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES---DLVNLKYVGGDMFK-----AISP-ADAVV 207 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~---~~~ri~~~~gD~~~-----~~p~-~D~~~ 207 (209)
+.+..+|||||||+|.++..+++.+|..+++++|. +.+++.+++ ..++++++.+|+.+ +++. +|+++
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~ 148 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIY 148 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEE
Confidence 45678999999999999999999999889999999 677766553 23789999999976 2223 89886
No 86
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.59 E-value=2.2e-07 Score=70.32 Aligned_cols=74 Identities=15% Similarity=0.353 Sum_probs=58.2
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCC--CeEEEEccCCCCCCC
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLV--NLKYVGGDMFKAISP 202 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~--ri~~~~gD~~~~~p~ 202 (209)
..+++.+. .....+|||||||+|.++..++++ ..+++++|+ +.+++.+++ ... |++++.+|+.+..+.
T Consensus 42 ~~l~~~~~--~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~ 117 (194)
T 1dus_A 42 KILVENVV--VDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKD 117 (194)
T ss_dssp HHHHHHCC--CCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTT
T ss_pred HHHHHHcc--cCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccccc
Confidence 34455555 456789999999999999999998 778999999 778877764 122 599999999886543
Q ss_pred --CcEEEe
Q 046346 203 --ADAVVL 208 (209)
Q Consensus 203 --~D~~~l 208 (209)
+|+++.
T Consensus 118 ~~~D~v~~ 125 (194)
T 1dus_A 118 RKYNKIIT 125 (194)
T ss_dssp SCEEEEEE
T ss_pred CCceEEEE
Confidence 899875
No 87
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.58 E-value=1.4e-07 Score=76.01 Aligned_cols=76 Identities=16% Similarity=0.164 Sum_probs=58.5
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeechH-------HHhhccc------CCCCeEEEEcc-
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAF-PKLECTCFDLPH-------VVNGLES------DLVNLKYVGGD- 195 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-P~l~~~~~Dlp~-------v~~~a~~------~~~ri~~~~gD- 195 (209)
..+++.++ ..+..+|||||||+|.++..+++++ |+.+++++|+.+ +++.|++ ..++++++.+|
T Consensus 33 ~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 110 (275)
T 3bkx_A 33 LAIAEAWQ--VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTN 110 (275)
T ss_dssp HHHHHHHT--CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCC
T ss_pred HHHHHHcC--CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECCh
Confidence 34555555 5667899999999999999999996 889999999943 6777664 12689999998
Q ss_pred CCC---CCC-C-CcEEEe
Q 046346 196 MFK---AIS-P-ADAVVL 208 (209)
Q Consensus 196 ~~~---~~p-~-~D~~~l 208 (209)
+.. +++ . +|+|+.
T Consensus 111 ~~~~~~~~~~~~fD~v~~ 128 (275)
T 3bkx_A 111 LSDDLGPIADQHFDRVVL 128 (275)
T ss_dssp TTTCCGGGTTCCCSEEEE
T ss_pred hhhccCCCCCCCEEEEEE
Confidence 654 233 2 899975
No 88
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.58 E-value=4.9e-08 Score=78.11 Aligned_cols=68 Identities=10% Similarity=0.195 Sum_probs=56.7
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhhccc------CCCCeEEEEccCCC---CCC---CCcEE
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFP-KLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFK---AIS---PADAV 206 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P-~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~---~~p---~~D~~ 206 (209)
..+..+|||||||+|..+..+++.+| +.+++++|+ +.+++.|++ ..++|+++.+|+.+ .++ .+|+|
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 44678999999999999999999998 889999999 788887764 34689999999865 222 38999
Q ss_pred Ee
Q 046346 207 VL 208 (209)
Q Consensus 207 ~l 208 (209)
++
T Consensus 141 ~~ 142 (248)
T 3tfw_A 141 FI 142 (248)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 89
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.58 E-value=9.2e-08 Score=76.10 Aligned_cols=67 Identities=13% Similarity=0.262 Sum_probs=53.8
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----------CCCCeEEEEccCCCC----CCC--C
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----------DLVNLKYVGGDMFKA----ISP--A 203 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----------~~~ri~~~~gD~~~~----~p~--~ 203 (209)
....+|||||||+|.++..+++++|+.+++++|+ +.+++.|++ ...+|+++.+|+.+. ++. +
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 4567999999999999999999999999999999 677765542 246899999999763 333 7
Q ss_pred cEEEe
Q 046346 204 DAVVL 208 (209)
Q Consensus 204 D~~~l 208 (209)
|.+++
T Consensus 125 D~v~~ 129 (235)
T 3ckk_A 125 TKMFF 129 (235)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 88764
No 90
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.58 E-value=2.7e-07 Score=72.70 Aligned_cols=68 Identities=15% Similarity=0.283 Sum_probs=56.6
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCC---C--CC-CcEEE
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKA---I--SP-ADAVV 207 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~---~--p~-~D~~~ 207 (209)
..+..+|||||||+|..+..+++.+|..+++++|+ +.+++.|++ ..++++++.+|+.+. . +. +|+|+
T Consensus 52 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 131 (233)
T 2gpy_A 52 MAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLF 131 (233)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEE
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEE
Confidence 34568999999999999999999999999999999 788887764 236899999999873 2 23 89987
Q ss_pred e
Q 046346 208 L 208 (209)
Q Consensus 208 l 208 (209)
+
T Consensus 132 ~ 132 (233)
T 2gpy_A 132 I 132 (233)
T ss_dssp E
T ss_pred E
Confidence 5
No 91
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.58 E-value=1.7e-07 Score=73.94 Aligned_cols=66 Identities=15% Similarity=0.309 Sum_probs=55.1
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccC--CCCeEEEEccCCC-CCCC--CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESD--LVNLKYVGGDMFK-AISP--ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~--~~ri~~~~gD~~~-~~p~--~D~~~l 208 (209)
..+..+|||||||+|.++..++++ ..+++++|+ +.+++.+++. ..+++++.+|+.+ ++|. +|+++.
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 122 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMA 122 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEE
Confidence 346789999999999999999998 568999999 7888887753 5789999999987 5543 899975
No 92
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.58 E-value=4.1e-08 Score=76.81 Aligned_cols=68 Identities=12% Similarity=0.187 Sum_probs=56.4
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCCC--------CCCc
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFP-KLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKAI--------SPAD 204 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P-~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~~--------p~~D 204 (209)
..+..+|||||||+|..+..+++++| +.+++.+|+ +.+++.|++ ..++++++.+|+.+.+ ..+|
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 34678999999999999999999999 789999999 788887764 3468999999987622 2389
Q ss_pred EEEe
Q 046346 205 AVVL 208 (209)
Q Consensus 205 ~~~l 208 (209)
++++
T Consensus 136 ~v~~ 139 (223)
T 3duw_A 136 FIFI 139 (223)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9985
No 93
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.58 E-value=1.4e-07 Score=76.03 Aligned_cols=68 Identities=18% Similarity=0.283 Sum_probs=56.3
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccC---------CCCeEEEEccCCCC--------CC-
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESD---------LVNLKYVGGDMFKA--------IS- 201 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~---------~~ri~~~~gD~~~~--------~p- 201 (209)
.....+|||+|||+|.++..+++++|..+++++|+ +.+++.|++. .+|++++.+|+.+. ++
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 34567999999999999999999999999999999 7888777641 23799999999874 33
Q ss_pred C-CcEEEe
Q 046346 202 P-ADAVVL 208 (209)
Q Consensus 202 ~-~D~~~l 208 (209)
. +|+|+.
T Consensus 114 ~~fD~Vv~ 121 (260)
T 2ozv_A 114 EHFHHVIM 121 (260)
T ss_dssp TCEEEEEE
T ss_pred CCcCEEEE
Confidence 3 899985
No 94
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.58 E-value=1.1e-07 Score=74.92 Aligned_cols=74 Identities=18% Similarity=0.319 Sum_probs=56.5
Q ss_pred HHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccC-CCCeEEEEccCCCCCC-C-CcEEE
Q 046346 132 VMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESD-LVNLKYVGGDMFKAIS-P-ADAVV 207 (209)
Q Consensus 132 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~-~~ri~~~~gD~~~~~p-~-~D~~~ 207 (209)
.+++.+.. .....+|||||||+|.++..++++++ +++++|+ +.+++.|++. ..+++++.+|+.+..+ . +|+|+
T Consensus 32 ~~~~~l~~-~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~~~~~fD~v~ 108 (250)
T 2p7i_A 32 FMVRAFTP-FFRPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPRRYDNIV 108 (250)
T ss_dssp HHHHHHGG-GCCSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCSSCEEEEE
T ss_pred HHHHHHHh-hcCCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcCcCCcccEEE
Confidence 34444432 23567899999999999999999987 5888999 7888888753 2289999999977533 3 89997
Q ss_pred e
Q 046346 208 L 208 (209)
Q Consensus 208 l 208 (209)
+
T Consensus 109 ~ 109 (250)
T 2p7i_A 109 L 109 (250)
T ss_dssp E
T ss_pred E
Confidence 5
No 95
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.57 E-value=2.1e-07 Score=73.97 Aligned_cols=65 Identities=22% Similarity=0.407 Sum_probs=53.6
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----CCCCeEEEEccCCC-CCCC-CcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----DLVNLKYVGGDMFK-AISP-ADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~~~ri~~~~gD~~~-~~p~-~D~~~l 208 (209)
.+..+|||||||+|.++..++++ +.+++++|+ +.+++.|++ ...+++++.+|+.+ +.+. +|++++
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~ 111 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFDAVTM 111 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCEEEEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCccEEEE
Confidence 45689999999999999999997 568999999 788887764 24479999999987 4554 899874
No 96
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.57 E-value=1.6e-07 Score=74.27 Aligned_cols=75 Identities=20% Similarity=0.368 Sum_probs=59.1
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCCCCCC--
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFKAISP-- 202 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~~~p~-- 202 (209)
..+++.++ ..+..+|||||||+|.++..+++..| .+++++|+ +.+++.|++ ...++++..+|+..++|.
T Consensus 81 ~~~~~~l~--~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (235)
T 1jg1_A 81 AIMLEIAN--LKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKA 157 (235)
T ss_dssp HHHHHHHT--CCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGC
T ss_pred HHHHHhcC--CCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCCC
Confidence 33444444 55678999999999999999999998 88999997 788887764 124699999998656653
Q ss_pred -CcEEEe
Q 046346 203 -ADAVVL 208 (209)
Q Consensus 203 -~D~~~l 208 (209)
+|+|++
T Consensus 158 ~fD~Ii~ 164 (235)
T 1jg1_A 158 PYDVIIV 164 (235)
T ss_dssp CEEEEEE
T ss_pred CccEEEE
Confidence 799875
No 97
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.57 E-value=2e-07 Score=70.57 Aligned_cols=65 Identities=25% Similarity=0.350 Sum_probs=55.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCC-CCCC--CcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFK-AISP--ADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~-~~p~--~D~~~l 208 (209)
.+..+|||||||+|.++..+++. +.+++++|. +.+++.+++...+++++.+|+.+ ++|. +|+++.
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~ 113 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVS 113 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEE
T ss_pred cCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEE
Confidence 46789999999999999999998 568999999 78888887656679999999987 5553 899986
No 98
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.56 E-value=1.4e-07 Score=74.84 Aligned_cols=75 Identities=17% Similarity=0.296 Sum_probs=58.9
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccC---CCCeEEEEccCCC-CCCC--C
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESD---LVNLKYVGGDMFK-AISP--A 203 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~---~~ri~~~~gD~~~-~~p~--~ 203 (209)
..+++.++ ..+..+|||||||+|.++..+++++ ..+++++|. +.+++.+++. ..+++++.+|+.+ +++. +
T Consensus 83 ~~~l~~l~--~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~f 159 (254)
T 1xtp_A 83 RNFIASLP--GHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTY 159 (254)
T ss_dssp HHHHHTST--TCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCE
T ss_pred HHHHHhhc--ccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCe
Confidence 34455554 4567899999999999999999987 557899998 7888887752 2689999999976 4543 8
Q ss_pred cEEEe
Q 046346 204 DAVVL 208 (209)
Q Consensus 204 D~~~l 208 (209)
|+|+.
T Consensus 160 D~v~~ 164 (254)
T 1xtp_A 160 DLIVI 164 (254)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99975
No 99
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.56 E-value=1.9e-07 Score=70.84 Aligned_cols=66 Identities=14% Similarity=0.189 Sum_probs=52.9
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCC--CC-CC-CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFK--AI-SP-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~--~~-p~-~D~~~l 208 (209)
.....+|||||||+|.++..++++ ..+++++|+ |.+++.|++ ..++++++..|+.+ ++ +. +|++++
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~ 95 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIF 95 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEE
Confidence 456789999999999999999998 788999999 788888775 12789999977654 13 33 899874
No 100
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.56 E-value=1.3e-07 Score=79.32 Aligned_cols=76 Identities=20% Similarity=0.323 Sum_probs=59.8
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----CCCCeEEEEccCCCCCCC-Cc
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----DLVNLKYVGGDMFKAISP-AD 204 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~~~ri~~~~gD~~~~~p~-~D 204 (209)
..+++.++ .....+|||||||+|.++..+++++|+.+++++|. +.+++.+++ ...+++++.+|+++..+. +|
T Consensus 186 ~~ll~~l~--~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~fD 263 (343)
T 2pjd_A 186 QLLLSTLT--PHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRFD 263 (343)
T ss_dssp HHHHHHSC--TTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCEE
T ss_pred HHHHHhcC--cCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCCee
Confidence 44556564 23456999999999999999999999999999999 677887764 233577899999875554 99
Q ss_pred EEEe
Q 046346 205 AVVL 208 (209)
Q Consensus 205 ~~~l 208 (209)
+|+.
T Consensus 264 ~Iv~ 267 (343)
T 2pjd_A 264 MIIS 267 (343)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9986
No 101
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.56 E-value=8.5e-08 Score=73.77 Aligned_cols=63 Identities=16% Similarity=0.190 Sum_probs=54.2
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCC-CCC-C-CcEEEe
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFK-AIS-P-ADAVVL 208 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~-~~p-~-~D~~~l 208 (209)
..+|||||||+|.++..++++ +.+++++|. +.+++.+++...+++++.+|+.+ +++ . +|+|++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 108 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLA 108 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEe
Confidence 689999999999999999998 558999999 78888888666789999999987 554 3 899875
No 102
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.55 E-value=9.9e-08 Score=74.77 Aligned_cols=67 Identities=13% Similarity=0.183 Sum_probs=55.3
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhhccc------CCCCeEEEEccCCC---CCC------CCc
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFP-KLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFK---AIS------PAD 204 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P-~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~---~~p------~~D 204 (209)
.+..+|||||||+|..+..+++..| +.+++.+|+ |.+++.|++ ..++|+++.+|+.+ .++ .+|
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 4678999999999999999999875 889999999 788887775 34689999999754 233 389
Q ss_pred EEEe
Q 046346 205 AVVL 208 (209)
Q Consensus 205 ~~~l 208 (209)
++++
T Consensus 137 ~V~~ 140 (221)
T 3u81_A 137 MVFL 140 (221)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9986
No 103
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.55 E-value=2.8e-07 Score=71.22 Aligned_cols=74 Identities=18% Similarity=0.282 Sum_probs=58.5
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCCCCC---
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFKAIS--- 201 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~~~p--- 201 (209)
..+++.++ ..+..+|||||||+|.++..+++. ..+++++|. +.+++.|++ ...+++++.+|+.+..+
T Consensus 67 ~~~~~~l~--~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 142 (210)
T 3lbf_A 67 ARMTELLE--LTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARA 142 (210)
T ss_dssp HHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGC
T ss_pred HHHHHhcC--CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCC
Confidence 33445555 566789999999999999999999 678999999 788887764 23589999999988543
Q ss_pred CCcEEEe
Q 046346 202 PADAVVL 208 (209)
Q Consensus 202 ~~D~~~l 208 (209)
.+|+++.
T Consensus 143 ~~D~i~~ 149 (210)
T 3lbf_A 143 PFDAIIV 149 (210)
T ss_dssp CEEEEEE
T ss_pred CccEEEE
Confidence 2899986
No 104
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.55 E-value=2.8e-07 Score=73.35 Aligned_cols=76 Identities=22% Similarity=0.326 Sum_probs=62.3
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHH-CCCCeEEEeec-hHHHhhcccC------CCCeEEEEccCCCC-CC
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKA-FPKLECTCFDL-PHVVNGLESD------LVNLKYVGGDMFKA-IS 201 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~P~l~~~~~Dl-p~v~~~a~~~------~~ri~~~~gD~~~~-~p 201 (209)
..++..++ .....+|||+|||+|.++..+++. .|..+++++|. +.+++.|++. .+++++..+|+.+. ++
T Consensus 86 ~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~ 163 (258)
T 2pwy_A 86 SAMVTLLD--LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELE 163 (258)
T ss_dssp HHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCC
T ss_pred HHHHHHcC--CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC
Confidence 34556565 567789999999999999999999 78999999998 7888877641 36899999999874 66
Q ss_pred C--CcEEEe
Q 046346 202 P--ADAVVL 208 (209)
Q Consensus 202 ~--~D~~~l 208 (209)
. +|+|++
T Consensus 164 ~~~~D~v~~ 172 (258)
T 2pwy_A 164 EAAYDGVAL 172 (258)
T ss_dssp TTCEEEEEE
T ss_pred CCCcCEEEE
Confidence 4 899975
No 105
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.54 E-value=1.4e-07 Score=74.11 Aligned_cols=65 Identities=11% Similarity=0.154 Sum_probs=55.1
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCCC--CC--C-CcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFKA--IS--P-ADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~~--~p--~-~D~~~l 208 (209)
....+|||||||+|.++..++++ ..+++++|+ +.+++.+++...+++++.+|+.+. ++ . +|+|+.
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~ 117 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVS 117 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEe
Confidence 45689999999999999999998 568999999 788888886677899999999764 33 2 899875
No 106
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.54 E-value=3.8e-07 Score=76.43 Aligned_cols=75 Identities=17% Similarity=0.185 Sum_probs=58.7
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc------CCCCeEEEEccCCC-CCC-C
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES------DLVNLKYVGGDMFK-AIS-P 202 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~------~~~ri~~~~gD~~~-~~p-~ 202 (209)
..+.+.+. ..+..+|||||||+|.++..++++ +..+++++|..++++.|++ ..++|+++.+|+.+ ++| .
T Consensus 54 ~~i~~~~~--~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 130 (340)
T 2fyt_A 54 DFIYQNPH--IFKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVE 130 (340)
T ss_dssp HHHHHCGG--GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCS
T ss_pred HHHHhhhh--hcCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCC
Confidence 34444444 456789999999999999999987 4568999999768877764 23799999999987 566 3
Q ss_pred -CcEEEe
Q 046346 203 -ADAVVL 208 (209)
Q Consensus 203 -~D~~~l 208 (209)
+|+|+.
T Consensus 131 ~~D~Ivs 137 (340)
T 2fyt_A 131 KVDVIIS 137 (340)
T ss_dssp CEEEEEE
T ss_pred cEEEEEE
Confidence 899974
No 107
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.54 E-value=2.9e-07 Score=71.46 Aligned_cols=75 Identities=17% Similarity=0.212 Sum_probs=59.4
Q ss_pred HHHHhccccccCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCCCCC---
Q 046346 132 VMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAF-PKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFKAIS--- 201 (209)
Q Consensus 132 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~~~p--- 201 (209)
.+++.+. .....+|||||||+|.++..+++.. |+.+++++|. +.+++.+++ ..+++++..+|+..+++
T Consensus 68 ~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 145 (215)
T 2yxe_A 68 MMCELLD--LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLA 145 (215)
T ss_dssp HHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGC
T ss_pred HHHHhhC--CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCC
Confidence 3444444 4567899999999999999999998 7789999999 778877764 23579999999976654
Q ss_pred CCcEEEe
Q 046346 202 PADAVVL 208 (209)
Q Consensus 202 ~~D~~~l 208 (209)
.+|+++.
T Consensus 146 ~fD~v~~ 152 (215)
T 2yxe_A 146 PYDRIYT 152 (215)
T ss_dssp CEEEEEE
T ss_pred CeeEEEE
Confidence 2899875
No 108
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.54 E-value=2.1e-07 Score=78.21 Aligned_cols=67 Identities=16% Similarity=0.158 Sum_probs=56.0
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc------CCCCeEEEEccCCC-CCC-C-CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES------DLVNLKYVGGDMFK-AIS-P-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~------~~~ri~~~~gD~~~-~~p-~-~D~~~l 208 (209)
.....+|||||||+|.++..++++ +..+++++|..++++.|++ ..++|+++.+|+.+ ++| . +|+|+.
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis 139 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIIS 139 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEE
T ss_pred cCCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEE
Confidence 345689999999999999999998 6679999999778877764 35679999999988 676 3 999974
No 109
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.54 E-value=3.4e-07 Score=69.80 Aligned_cols=74 Identities=19% Similarity=0.254 Sum_probs=57.8
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCC-CCCC-
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFK-AISP- 202 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~-~~p~- 202 (209)
+.+++.++ .....+|||||||+|.++..++++ +.+++++|. +.+++.+++ ...+++++.+|+.+ +.+.
T Consensus 22 ~~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~ 97 (199)
T 2xvm_A 22 SEVLEAVK--VVKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQ 97 (199)
T ss_dssp HHHHHHTT--TSCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCC
T ss_pred HHHHHHhh--ccCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCC
Confidence 34556555 445679999999999999999998 668999999 778887764 23479999999977 4444
Q ss_pred CcEEEe
Q 046346 203 ADAVVL 208 (209)
Q Consensus 203 ~D~~~l 208 (209)
+|+++.
T Consensus 98 ~D~v~~ 103 (199)
T 2xvm_A 98 YDFILS 103 (199)
T ss_dssp EEEEEE
T ss_pred ceEEEE
Confidence 899875
No 110
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.53 E-value=1e-07 Score=76.66 Aligned_cols=64 Identities=8% Similarity=-0.062 Sum_probs=52.6
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-C---------------------CCCeEEEEccCCC-
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-D---------------------LVNLKYVGGDMFK- 198 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-~---------------------~~ri~~~~gD~~~- 198 (209)
...+|||||||+|..+..|+++ +.+++++|+ +.+++.|++ . ..+|+|+.+|+++
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 5689999999999999999998 568999999 788887753 1 2689999999998
Q ss_pred CCC--C-CcEEEe
Q 046346 199 AIS--P-ADAVVL 208 (209)
Q Consensus 199 ~~p--~-~D~~~l 208 (209)
+.+ . +|+|+.
T Consensus 146 ~~~~~~~FD~V~~ 158 (252)
T 2gb4_A 146 PRANIGKFDRIWD 158 (252)
T ss_dssp GGGCCCCEEEEEE
T ss_pred CcccCCCEEEEEE
Confidence 332 3 999974
No 111
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.53 E-value=1e-07 Score=75.67 Aligned_cols=67 Identities=27% Similarity=0.360 Sum_probs=55.1
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCC-CC----CC-CcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFK-AI----SP-ADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~-~~----p~-~D~~~l 208 (209)
....+|||||||+|..+..+++..|+.+++++|. +.+++.|++ ...+|+++.+|+.+ +. +. +|+|+.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~ 147 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTA 147 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEE
Confidence 4568999999999999999999999999999999 778877764 23469999999865 32 23 899875
No 112
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.53 E-value=1.8e-07 Score=75.13 Aligned_cols=67 Identities=18% Similarity=0.363 Sum_probs=57.3
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCC-CCCC--CcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFK-AISP--ADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~-~~p~--~D~~~l 208 (209)
....+|||||||+|.++..+++++|..+++++|. +.+++.|++...+++++.+|+.+ +++. +|+++.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 154 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIR 154 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEE
Confidence 4568999999999999999999999999999999 78888887666789999999876 4443 899874
No 113
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.53 E-value=1.3e-07 Score=75.90 Aligned_cols=67 Identities=13% Similarity=0.175 Sum_probs=55.9
Q ss_pred cc-CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCC---CC-C-CcEEE
Q 046346 141 FE-GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKA---IS-P-ADAVV 207 (209)
Q Consensus 141 ~~-~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~---~p-~-~D~~~ 207 (209)
.. +..+|||+|||+|.++..++++.+. +++++|+ +.+++.|++ ..+|++++.+|+.+. ++ . +|+|+
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEE
Confidence 45 6789999999999999999999887 9999999 788887764 356899999999872 33 3 89998
Q ss_pred e
Q 046346 208 L 208 (209)
Q Consensus 208 l 208 (209)
.
T Consensus 125 ~ 125 (259)
T 3lpm_A 125 C 125 (259)
T ss_dssp E
T ss_pred E
Confidence 5
No 114
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.53 E-value=1.2e-07 Score=72.74 Aligned_cols=68 Identities=15% Similarity=0.196 Sum_probs=55.3
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCC-C--CCC-CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAF-PKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFK-A--ISP-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~-P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~-~--~p~-~D~~~l 208 (209)
.....+|||+|||+|.++..+++++ |..+++++|+ +.+++.|++ ..++++++.+|+.+ + .+. +|+++.
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 99 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMF 99 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEE
Confidence 3456899999999999999999996 7789999999 788887775 14689999999865 1 233 899874
No 115
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.53 E-value=1.7e-07 Score=77.39 Aligned_cols=76 Identities=17% Similarity=0.177 Sum_probs=60.2
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----CCCCeEEEEccCCC-C--C--
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----DLVNLKYVGGDMFK-A--I-- 200 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~~~ri~~~~gD~~~-~--~-- 200 (209)
..+++.+. .....+|||+|||+|.++..+++++|+.+++++|+ |.+++.|++ ..+|++++.+||.+ + +
T Consensus 16 ~e~l~~L~--~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~ 93 (301)
T 1m6y_A 16 REVIEFLK--PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKT 93 (301)
T ss_dssp HHHHHHHC--CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHH
T ss_pred HHHHHhcC--CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHh
Confidence 44555555 45668999999999999999999999999999999 788888775 23799999999865 1 1
Q ss_pred ---CCCcEEEe
Q 046346 201 ---SPADAVVL 208 (209)
Q Consensus 201 ---p~~D~~~l 208 (209)
..+|.+++
T Consensus 94 ~g~~~~D~Vl~ 104 (301)
T 1m6y_A 94 LGIEKVDGILM 104 (301)
T ss_dssp TTCSCEEEEEE
T ss_pred cCCCCCCEEEE
Confidence 24788775
No 116
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.53 E-value=7.5e-08 Score=75.35 Aligned_cols=68 Identities=15% Similarity=0.093 Sum_probs=55.9
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCC---C------CCC
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFP-KLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKA---I------SPA 203 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P-~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~---~------p~~ 203 (209)
..+..+|||||||+|..+..+++++| +.+++++|. +.+++.|++ ..++++++.+|+.+. + ..+
T Consensus 62 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (225)
T 3tr6_A 62 LMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQY 141 (225)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCE
T ss_pred hhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCc
Confidence 34568999999999999999999998 889999999 788887764 346899999998652 2 238
Q ss_pred cEEEe
Q 046346 204 DAVVL 208 (209)
Q Consensus 204 D~~~l 208 (209)
|++++
T Consensus 142 D~v~~ 146 (225)
T 3tr6_A 142 DLIYI 146 (225)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 99885
No 117
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.52 E-value=1.1e-07 Score=76.40 Aligned_cols=67 Identities=22% Similarity=0.214 Sum_probs=54.8
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCC-CC----CC-CcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFK-AI----SP-ADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~-~~----p~-~D~~~l 208 (209)
....+|||||||+|..+..++..+|+.+++++|. +.+++.+++ ...+|+++.+|+.+ +. +. +|+|+.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEE
Confidence 3568999999999999999999999999999998 677777664 23469999999865 22 23 899874
No 118
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.52 E-value=3e-07 Score=75.21 Aligned_cols=75 Identities=23% Similarity=0.387 Sum_probs=59.7
Q ss_pred HHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccC------CCCeEEEEccCCC-CCC
Q 046346 130 TSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESD------LVNLKYVGGDMFK-AIS 201 (209)
Q Consensus 130 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~------~~ri~~~~gD~~~-~~p 201 (209)
...+++.++ .....+|||||||+|.++..++++.. +++++|+ +.+++.+++. .++++++.+|+.+ ++|
T Consensus 17 ~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~L~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~ 92 (285)
T 1zq9_A 17 INSIIDKAA--LRPTDVVLEVGPGTGNMTVKLLEKAK--KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP 92 (285)
T ss_dssp HHHHHHHTC--CCTTCEEEEECCTTSTTHHHHHHHSS--EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC
T ss_pred HHHHHHhcC--CCCCCEEEEEcCcccHHHHHHHhhCC--EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch
Confidence 455566665 55678999999999999999999954 7889999 7788777641 2589999999987 677
Q ss_pred CCcEEEe
Q 046346 202 PADAVVL 208 (209)
Q Consensus 202 ~~D~~~l 208 (209)
.+|+++.
T Consensus 93 ~fD~vv~ 99 (285)
T 1zq9_A 93 FFDTCVA 99 (285)
T ss_dssp CCSEEEE
T ss_pred hhcEEEE
Confidence 7898864
No 119
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.51 E-value=2e-07 Score=75.63 Aligned_cols=64 Identities=19% Similarity=0.299 Sum_probs=52.9
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCC-C-CC-C-CcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFK-A-IS-P-ADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~-~-~p-~-~D~~~l 208 (209)
...+|||||||+|.++..++++ ..+++++|+ +.+++.|++ ..++++++.+|+.+ + ++ . +|+|+.
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 142 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILF 142 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEE
Confidence 4579999999999999999998 668999999 788887774 22789999999977 2 33 3 899975
No 120
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.51 E-value=2.4e-07 Score=78.70 Aligned_cols=67 Identities=16% Similarity=0.206 Sum_probs=56.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHHhhcccC---------C----CCeEEEEccCCC-------C
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAF-PKLECTCFDL-PHVVNGLESD---------L----VNLKYVGGDMFK-------A 199 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~-P~l~~~~~Dl-p~v~~~a~~~---------~----~ri~~~~gD~~~-------~ 199 (209)
....+|||||||+|.++..+++.+ |..+++++|+ +.+++.|++. . .+++|+.+|+.+ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 356899999999999999999997 8899999999 7888887742 2 699999999987 5
Q ss_pred CCC--CcEEEe
Q 046346 200 ISP--ADAVVL 208 (209)
Q Consensus 200 ~p~--~D~~~l 208 (209)
+|. +|+|+.
T Consensus 162 ~~~~~fD~V~~ 172 (383)
T 4fsd_A 162 VPDSSVDIVIS 172 (383)
T ss_dssp CCTTCEEEEEE
T ss_pred CCCCCEEEEEE
Confidence 553 899975
No 121
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.51 E-value=5.1e-08 Score=77.49 Aligned_cols=65 Identities=17% Similarity=0.144 Sum_probs=52.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----CCCCeEEEEccCCC---CCCC--CcEEE
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----DLVNLKYVGGDMFK---AISP--ADAVV 207 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~~~ri~~~~gD~~~---~~p~--~D~~~ 207 (209)
....+|||||||+|..+..+++..|. +++++|+ |.+++.|++ ...+++++.+|+.+ ++|. +|.++
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~ 133 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEE
Confidence 45689999999999999999988875 7899999 889988875 35678888888653 4553 78775
No 122
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.51 E-value=1.8e-07 Score=71.93 Aligned_cols=65 Identities=23% Similarity=0.338 Sum_probs=54.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCCCCCC-CcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFKAISP-ADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~~~p~-~D~~~l 208 (209)
....+|||+|||+|.++..+++. +..+++++|+ +.+++.|++...+++++.+|+.+ +|. +|++++
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~-~~~~~D~v~~ 116 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCGGVNFMVADVSE-ISGKYDTWIM 116 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGG-CCCCEEEEEE
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHH-CCCCeeEEEE
Confidence 35689999999999999999987 5567999999 78888887643489999999976 455 899875
No 123
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.51 E-value=2.7e-07 Score=73.57 Aligned_cols=58 Identities=22% Similarity=0.353 Sum_probs=48.9
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-------------CCCCeEEEEccCCCC
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-------------DLVNLKYVGGDMFKA 199 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-------------~~~ri~~~~gD~~~~ 199 (209)
....+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ ...+++++.+|+++.
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~ 119 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKF 119 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSC
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHH
Confidence 3567999999999999999999999999999998 677776643 125899999999873
No 124
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.50 E-value=5e-07 Score=75.87 Aligned_cols=75 Identities=15% Similarity=0.150 Sum_probs=58.5
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc------CCCCeEEEEccCCC-CCCC-
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES------DLVNLKYVGGDMFK-AISP- 202 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~------~~~ri~~~~gD~~~-~~p~- 202 (209)
..+.+.+. ..+..+|||||||+|.++..++++ +..+++++|..++++.|++ ..++|+++.+|+.+ ++|.
T Consensus 40 ~~i~~~l~--~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~ 116 (348)
T 2y1w_A 40 RAILQNHT--DFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQ 116 (348)
T ss_dssp HHHHHTGG--GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSC
T ss_pred HHHHhccc--cCCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCc
Confidence 34455554 445689999999999999999886 6678999999767776654 34789999999987 5665
Q ss_pred CcEEEe
Q 046346 203 ADAVVL 208 (209)
Q Consensus 203 ~D~~~l 208 (209)
+|+|+.
T Consensus 117 ~D~Ivs 122 (348)
T 2y1w_A 117 VDIIIS 122 (348)
T ss_dssp EEEEEE
T ss_pred eeEEEE
Confidence 899874
No 125
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.50 E-value=5.2e-07 Score=74.35 Aligned_cols=74 Identities=16% Similarity=0.195 Sum_probs=58.9
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCCCCC-
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKAISP- 202 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~~p~- 202 (209)
..+++.++ ..+..+|||||||+|.++..+++++ +.+++++|+ +.+++.|++ ..++++++.+|+.+ +|.
T Consensus 80 ~~~~~~~~--~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~ 155 (318)
T 2fk8_A 80 DLNLDKLD--LKPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWED-FAEP 155 (318)
T ss_dssp HHHHTTSC--CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGG-CCCC
T ss_pred HHHHHhcC--CCCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHH-CCCC
Confidence 44555555 5567899999999999999999997 569999999 788887764 23679999999854 455
Q ss_pred CcEEEe
Q 046346 203 ADAVVL 208 (209)
Q Consensus 203 ~D~~~l 208 (209)
+|+|+.
T Consensus 156 fD~v~~ 161 (318)
T 2fk8_A 156 VDRIVS 161 (318)
T ss_dssp CSEEEE
T ss_pred cCEEEE
Confidence 999874
No 126
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.50 E-value=3e-07 Score=72.67 Aligned_cols=63 Identities=21% Similarity=0.416 Sum_probs=51.7
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCC---CCCC--CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFK---AISP--ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~---~~p~--~D~~~l 208 (209)
+.+..+|||||||+|.++..++++ +.+++++|+ +.+++.+++ +++++.+|+.+ ++|. +|+|+.
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~---~~~~~~~d~~~~~~~~~~~~fD~i~~ 107 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEG---KFNVVKSDAIEYLKSLPDKYLDGVMI 107 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHT---TSEEECSCHHHHHHTSCTTCBSEEEE
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHh---hcceeeccHHHHhhhcCCCCeeEEEE
Confidence 456689999999999999999998 456899999 788888773 38999999876 5553 999975
No 127
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.49 E-value=1.4e-07 Score=70.99 Aligned_cols=66 Identities=12% Similarity=0.059 Sum_probs=53.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCC---CCC-CcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKA---ISP-ADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~---~p~-~D~~~l 208 (209)
....+|||+|||+|.++..++++ +..+++++|+ +.+++.|++ ..++++++.+|+.+. .+. +|++++
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~ 106 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFL 106 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEE
Confidence 35679999999999999999988 6779999999 788887774 235899999998762 233 899875
No 128
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.49 E-value=2.4e-07 Score=72.95 Aligned_cols=64 Identities=9% Similarity=0.135 Sum_probs=53.5
Q ss_pred CeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhhccc------CC-CCeEEEEccCCC---CC-CC-CcEEEe
Q 046346 145 NSLVDVGGGTGTAAKAIAKAFP-KLECTCFDL-PHVVNGLES------DL-VNLKYVGGDMFK---AI-SP-ADAVVL 208 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~l~~~~P-~l~~~~~Dl-p~v~~~a~~------~~-~ri~~~~gD~~~---~~-p~-~D~~~l 208 (209)
.+|||||||+|..+..+++.+| +.+++.+|+ +.+++.|++ .. +||+++.+|+.+ .+ +. +|++++
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 3999999999999999999986 789999999 788887764 23 689999999876 34 33 999986
No 129
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.49 E-value=1.4e-07 Score=77.63 Aligned_cols=67 Identities=19% Similarity=0.233 Sum_probs=55.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----------CCCCeEEEEccCCCCC---CC-CcEE
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----------DLVNLKYVGGDMFKAI---SP-ADAV 206 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----------~~~ri~~~~gD~~~~~---p~-~D~~ 206 (209)
+++.+|||||||+|.++..+++..|..+++++|+ |.+++.|++ ..+|++++.+|.++.+ +. +|+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 4578999999999999999999888889999999 788888875 1459999999988732 23 9999
Q ss_pred Ee
Q 046346 207 VL 208 (209)
Q Consensus 207 ~l 208 (209)
+.
T Consensus 162 i~ 163 (294)
T 3adn_A 162 IS 163 (294)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 130
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.48 E-value=3e-07 Score=72.37 Aligned_cols=64 Identities=16% Similarity=0.226 Sum_probs=52.7
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----CCCCeEEEEccCCC-CCCC-CcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----DLVNLKYVGGDMFK-AISP-ADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~~~ri~~~~gD~~~-~~p~-~D~~~l 208 (209)
+..+|||||||+|.++..++++ ..+++++|. +.+++.+++ ...+++++.+|+.+ +.+. +|+|++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~ 107 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITC 107 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCCceEEEE
Confidence 5689999999999999999998 457999999 788887774 22389999999977 4554 899986
No 131
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.48 E-value=3.3e-07 Score=71.06 Aligned_cols=66 Identities=14% Similarity=0.280 Sum_probs=53.8
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc---CCCCeEEEEccCCCCCC-C-CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES---DLVNLKYVGGDMFKAIS-P-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~---~~~ri~~~~gD~~~~~p-~-~D~~~l 208 (209)
.....+|||||||+|.++..++++. .+++++|+ +.+++.+++ ..++++++.+|+.+..| . +|+++.
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~ 120 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVV 120 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEEEE
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEEEE
Confidence 3456899999999999999999986 47899999 788888775 23589999999987333 3 899975
No 132
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.48 E-value=3.9e-07 Score=71.14 Aligned_cols=67 Identities=15% Similarity=0.141 Sum_probs=52.3
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHH----HhhcccCCCCeEEEEccCCCC-----CCC-CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHV----VNGLESDLVNLKYVGGDMFKA-----ISP-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v----~~~a~~~~~ri~~~~gD~~~~-----~p~-~D~~~l 208 (209)
..+..+|||||||+|.++..+++..|..+++++|+ |.+ .+.++ ...++.++.+|..++ ++. +|+++.
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~-~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~ 132 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVR-ERNNIIPLLFDASKPWKYSGIVEKVDLIYQ 132 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHH-HCSSEEEECSCTTCGGGTTTTCCCEEEEEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHh-cCCCeEEEEcCCCCchhhcccccceeEEEE
Confidence 45667999999999999999999998778999999 544 34444 245799999998763 334 899875
No 133
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.48 E-value=6.5e-08 Score=72.32 Aligned_cols=70 Identities=16% Similarity=0.235 Sum_probs=56.6
Q ss_pred HHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCCCCCC--CcEEEe
Q 046346 133 MIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFKAISP--ADAVVL 208 (209)
Q Consensus 133 ~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~~~p~--~D~~~l 208 (209)
+++.++ ..+..+|||||||+|.++..+++++. +++++|+ +.+++.+++..+++++..+| .+++. +|+++.
T Consensus 9 ~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~v~~~~~d--~~~~~~~~D~v~~ 81 (170)
T 3i9f_A 9 YLPNIF--EGKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEKFDSVITLSDP--KEIPDNSVDFILF 81 (170)
T ss_dssp THHHHH--SSCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHHCTTSEEESSG--GGSCTTCEEEEEE
T ss_pred HHHhcC--cCCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHhCCCcEEEeCC--CCCCCCceEEEEE
Confidence 344444 55678999999999999999999984 8999999 78888887657799999999 44443 899875
No 134
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.47 E-value=2.9e-07 Score=72.91 Aligned_cols=66 Identities=20% Similarity=0.278 Sum_probs=53.6
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc--CCCCeEEEEccCCC-CCC-------CCcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES--DLVNLKYVGGDMFK-AIS-------PADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~--~~~ri~~~~gD~~~-~~p-------~~D~~~l 208 (209)
.....+|||||||+|.++..++++++ +++++|. +.+++.+++ ...+++++.+|+.+ +.+ .+|+++.
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~ 130 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYM 130 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEE
Confidence 34568999999999999999999998 7889999 788888775 24589999999987 222 1688764
No 135
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.47 E-value=5.3e-07 Score=74.19 Aligned_cols=75 Identities=15% Similarity=0.254 Sum_probs=59.9
Q ss_pred HHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc---CCCCeEEEEccCCC-CCCC--
Q 046346 130 TSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES---DLVNLKYVGGDMFK-AISP-- 202 (209)
Q Consensus 130 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~---~~~ri~~~~gD~~~-~~p~-- 202 (209)
...+++.++ .....+|||||||+|.++..++++ ..+++++|+ +.+++.+++ ..++++++.+|+.+ ++|.
T Consensus 39 ~~~Iv~~l~--~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~ 114 (295)
T 3gru_A 39 VNKAVESAN--LTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLD 114 (295)
T ss_dssp HHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSC
T ss_pred HHHHHHhcC--CCCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCC
Confidence 455566665 556789999999999999999998 467899999 677777764 24789999999998 6665
Q ss_pred CcEEEe
Q 046346 203 ADAVVL 208 (209)
Q Consensus 203 ~D~~~l 208 (209)
+|+++.
T Consensus 115 fD~Iv~ 120 (295)
T 3gru_A 115 FNKVVA 120 (295)
T ss_dssp CSEEEE
T ss_pred ccEEEE
Confidence 888763
No 136
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.47 E-value=4.7e-07 Score=73.43 Aligned_cols=74 Identities=18% Similarity=0.221 Sum_probs=58.0
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----CCCCeEEEEccCCC-CCCC-C
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----DLVNLKYVGGDMFK-AISP-A 203 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~~~ri~~~~gD~~~-~~p~-~ 203 (209)
..+++.++ .....+|||||||+|.++..++++ ..+++++|. +.+++.+++ ...+++++.+|+.+ +.+. +
T Consensus 110 ~~~~~~~~--~~~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~f 185 (286)
T 3m70_A 110 GDVVDAAK--IISPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENY 185 (286)
T ss_dssp HHHHHHHH--HSCSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCE
T ss_pred HHHHHHhh--ccCCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCc
Confidence 34455555 346789999999999999999998 568999999 777877764 22389999999987 3444 9
Q ss_pred cEEEe
Q 046346 204 DAVVL 208 (209)
Q Consensus 204 D~~~l 208 (209)
|+|+.
T Consensus 186 D~i~~ 190 (286)
T 3m70_A 186 DFIVS 190 (286)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 99985
No 137
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.47 E-value=5.4e-07 Score=75.05 Aligned_cols=67 Identities=18% Similarity=0.243 Sum_probs=54.6
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc------CCCCeEEEEccCCC-CCC-C-CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES------DLVNLKYVGGDMFK-AIS-P-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~------~~~ri~~~~gD~~~-~~p-~-~D~~~l 208 (209)
..+..+|||||||+|.++..++++ +..+++++|..++++.|++ ..++|+++.+|+.+ ++| . +|+++.
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs 111 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIIS 111 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEE
T ss_pred hcCCCEEEEecCccHHHHHHHHHC-CCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEE
Confidence 345689999999999999999887 5568999999777777664 35789999999987 566 3 899874
No 138
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.46 E-value=3.2e-07 Score=72.26 Aligned_cols=64 Identities=27% Similarity=0.361 Sum_probs=53.1
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----CCCCeEEEEccCCC-CCCC-CcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----DLVNLKYVGGDMFK-AISP-ADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~~~ri~~~~gD~~~-~~p~-~D~~~l 208 (209)
....+|||||||+|.++..++++ .+++++|+ +.+++.|++ ...+++++.+|+.+ +.+. +|++++
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~ 102 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVDAITI 102 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcCEEEE
Confidence 34589999999999999999887 78999999 788887775 24689999999977 4555 899875
No 139
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.46 E-value=2.1e-07 Score=75.81 Aligned_cols=67 Identities=19% Similarity=0.197 Sum_probs=56.0
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-C--------CCCeEEEEccCCCC---CCC-CcEEE
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-D--------LVNLKYVGGDMFKA---ISP-ADAVV 207 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-~--------~~ri~~~~gD~~~~---~p~-~D~~~ 207 (209)
+...+|||||||+|.++..+++..|..+++++|+ |.+++.|++ . .+|++++.+|.++- .+. +|+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 3568999999999999999998878889999999 888888775 1 47999999998762 233 89997
Q ss_pred e
Q 046346 208 L 208 (209)
Q Consensus 208 l 208 (209)
+
T Consensus 154 ~ 154 (275)
T 1iy9_A 154 V 154 (275)
T ss_dssp E
T ss_pred E
Confidence 5
No 140
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.46 E-value=1.9e-07 Score=70.63 Aligned_cols=66 Identities=15% Similarity=0.107 Sum_probs=53.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCCC------CC-CcEEE
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKAI------SP-ADAVV 207 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~~------p~-~D~~~ 207 (209)
....+|||+|||+|.++..+++ .+..+++++|+ +.+++.|++ ..++++++.+|+.+.. +. +|+++
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVS-RGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHH-cCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 3567999999999999999888 56678999999 788887774 2368999999997722 33 89987
Q ss_pred e
Q 046346 208 L 208 (209)
Q Consensus 208 l 208 (209)
+
T Consensus 122 ~ 122 (187)
T 2fhp_A 122 L 122 (187)
T ss_dssp E
T ss_pred E
Confidence 5
No 141
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.46 E-value=2.7e-07 Score=75.12 Aligned_cols=66 Identities=17% Similarity=0.056 Sum_probs=55.4
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCCC-CC-CcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKAI-SP-ADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~~-p~-~D~~~l 208 (209)
.+..+|||+|||+|.++..+++..+. +++++|+ |.+++.|++ ..++++++.+|+++.. +. +|++++
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~ 198 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILM 198 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEE
Confidence 45689999999999999999999887 8999999 788887764 3467999999998843 33 899876
No 142
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.46 E-value=6.6e-07 Score=70.14 Aligned_cols=74 Identities=19% Similarity=0.234 Sum_probs=57.8
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccC---CCCeEEEEccCCCCCC--C-C
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESD---LVNLKYVGGDMFKAIS--P-A 203 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~---~~ri~~~~gD~~~~~p--~-~ 203 (209)
..+++.+. ..+..+|||||||+|.++..+++.. .+++++|. +.+++.+++. ..+++++.+|+.+.++ . +
T Consensus 60 ~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~f 135 (231)
T 1vbf_A 60 IFMLDELD--LHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPY 135 (231)
T ss_dssp HHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCE
T ss_pred HHHHHhcC--CCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCc
Confidence 34445554 5567899999999999999999997 68999998 7888877751 2289999999987444 2 8
Q ss_pred cEEEe
Q 046346 204 DAVVL 208 (209)
Q Consensus 204 D~~~l 208 (209)
|+++.
T Consensus 136 D~v~~ 140 (231)
T 1vbf_A 136 DRVVV 140 (231)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 99875
No 143
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.46 E-value=1.8e-07 Score=73.75 Aligned_cols=63 Identities=19% Similarity=0.239 Sum_probs=51.4
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCCCCC--CcEEEe
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKAISP--ADAVVL 208 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~~p~--~D~~~l 208 (209)
..+|||||||+|.++..+++ +..+++++|+ +.+++.|++ ...+++++.+|+.+..|. +|+|+.
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~ 138 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFD 138 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEE
T ss_pred CCCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEE
Confidence 35999999999999999976 5778999999 788887775 235799999999884343 899974
No 144
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.46 E-value=7.8e-08 Score=76.79 Aligned_cols=67 Identities=16% Similarity=0.212 Sum_probs=55.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCC---C-----CC-Cc
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFP-KLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKA---I-----SP-AD 204 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P-~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~---~-----p~-~D 204 (209)
.+..+|||||||+|..+..+++..| +.+++.+|+ |.+++.|++ ..++|+++.+|+.+. + +. +|
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 4578999999999999999999997 789999999 677777664 346999999998762 2 23 89
Q ss_pred EEEe
Q 046346 205 AVVL 208 (209)
Q Consensus 205 ~~~l 208 (209)
++++
T Consensus 139 ~V~~ 142 (242)
T 3r3h_A 139 FIFI 142 (242)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
No 145
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.45 E-value=5.2e-07 Score=68.75 Aligned_cols=65 Identities=11% Similarity=0.069 Sum_probs=52.5
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCCC---C-CC-CcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFKA---I-SP-ADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~~---~-p~-~D~~~l 208 (209)
...+|||+|||+|.++..++++ +..+++++|+ +.+++.|++ ..++++++.+|+.+. + +. +|++++
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~ 119 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLA 119 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEE
Confidence 5689999999999999988774 5668999999 788888775 126899999998762 3 23 999986
No 146
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.45 E-value=3.9e-07 Score=76.53 Aligned_cols=76 Identities=16% Similarity=0.156 Sum_probs=60.5
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCC-CCC-
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAF-PKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFK-AIS- 201 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~-~~p- 201 (209)
..++.... +.+..+|||+|||+|.++++++... |+.+++++|+ |.+++.|++ ..++|+++.+|+.+ +.+
T Consensus 193 ~~l~~~~~--~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~ 270 (354)
T 3tma_A 193 QALLRLAD--ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFF 270 (354)
T ss_dssp HHHHHHTT--CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTC
T ss_pred HHHHHHhC--CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCcccc
Confidence 33444445 5677899999999999999999998 9999999999 788888774 12389999999987 332
Q ss_pred -CCcEEEe
Q 046346 202 -PADAVVL 208 (209)
Q Consensus 202 -~~D~~~l 208 (209)
.+|+++.
T Consensus 271 ~~~D~Ii~ 278 (354)
T 3tma_A 271 PEVDRILA 278 (354)
T ss_dssp CCCSEEEE
T ss_pred CCCCEEEE
Confidence 3799875
No 147
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.44 E-value=6.3e-07 Score=72.39 Aligned_cols=76 Identities=14% Similarity=0.224 Sum_probs=60.5
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHH-CCCCeEEEeec-hHHHhhccc----C----CCCeEEEEccCCC-C
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKA-FPKLECTCFDL-PHVVNGLES----D----LVNLKYVGGDMFK-A 199 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~P~l~~~~~Dl-p~v~~~a~~----~----~~ri~~~~gD~~~-~ 199 (209)
..++..++ .....+|||+|||+|.++..+++. .|..+++++|+ +.+++.|++ . .++++++.+|+.+ +
T Consensus 89 ~~i~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~ 166 (280)
T 1i9g_A 89 AQIVHEGD--IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE 166 (280)
T ss_dssp HHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC
T ss_pred HHHHHHcC--CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC
Confidence 34555555 566789999999999999999996 68899999999 788877764 1 3689999999987 3
Q ss_pred CCC--CcEEEe
Q 046346 200 ISP--ADAVVL 208 (209)
Q Consensus 200 ~p~--~D~~~l 208 (209)
++. +|+|++
T Consensus 167 ~~~~~~D~v~~ 177 (280)
T 1i9g_A 167 LPDGSVDRAVL 177 (280)
T ss_dssp CCTTCEEEEEE
T ss_pred CCCCceeEEEE
Confidence 443 899875
No 148
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.43 E-value=6.4e-07 Score=71.41 Aligned_cols=64 Identities=11% Similarity=0.083 Sum_probs=54.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----CCCCeEEEEccCCC-CCCC-CcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----DLVNLKYVGGDMFK-AISP-ADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~~~ri~~~~gD~~~-~~p~-~D~~~l 208 (209)
..+.+|||||||.|.++..+. |..+.+++|+ +.+++.++. ...+.++..+|+.. +.|+ +|++++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLl 174 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALI 174 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHH
Confidence 568899999999999999988 9999999999 788887775 36788999999998 4555 999964
No 149
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.42 E-value=5.9e-07 Score=82.67 Aligned_cols=67 Identities=15% Similarity=0.224 Sum_probs=55.9
Q ss_pred cCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHHhhccc-----------CCCCeEEEEccCCC-CCC-C-CcE
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAF-PKLECTCFDL-PHVVNGLES-----------DLVNLKYVGGDMFK-AIS-P-ADA 205 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~-P~l~~~~~Dl-p~v~~~a~~-----------~~~ri~~~~gD~~~-~~p-~-~D~ 205 (209)
.+..+|||||||+|.++..+++.. |..+++++|+ +.+++.|++ ...+|+|+.+|+.+ +.+ . +|+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 467899999999999999999998 5679999999 788888764 23589999999987 444 2 999
Q ss_pred EEe
Q 046346 206 VVL 208 (209)
Q Consensus 206 ~~l 208 (209)
|+.
T Consensus 800 VV~ 802 (950)
T 3htx_A 800 GTC 802 (950)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
No 150
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.42 E-value=6.2e-07 Score=76.14 Aligned_cols=67 Identities=15% Similarity=0.156 Sum_probs=54.9
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc------CCCCeEEEEccCCC-CCCC-CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES------DLVNLKYVGGDMFK-AISP-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~------~~~ri~~~~gD~~~-~~p~-~D~~~l 208 (209)
.....+|||||||+|.++..++++. ..+++++|...+++.|++ ..++|+++.+|+.+ ++|. +|+|+.
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~ 135 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIIS 135 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEE
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEE
Confidence 4467899999999999999999984 348999999877777764 35789999999977 5655 999974
No 151
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.42 E-value=1.9e-07 Score=74.02 Aligned_cols=58 Identities=19% Similarity=0.269 Sum_probs=49.1
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhhccc------CCCCeEEEEccCCC
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFP-KLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFK 198 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P-~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~ 198 (209)
..+..+|||||||+|..+..+++.+| ..+++++|. +.+++.|++ ..++++++.+|+.+
T Consensus 58 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 123 (239)
T 2hnk_A 58 ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALE 123 (239)
T ss_dssp HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHH
Confidence 34678999999999999999999998 689999999 778877764 23579999999865
No 152
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.42 E-value=6.5e-07 Score=68.61 Aligned_cols=61 Identities=16% Similarity=0.201 Sum_probs=47.9
Q ss_pred HHHhccccccCCCeEEEecCCccHHHHHHHHHCC--CCeEEEeechHHHhhcccCCCCeEEEEccCCCC
Q 046346 133 MIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFP--KLECTCFDLPHVVNGLESDLVNLKYVGGDMFKA 199 (209)
Q Consensus 133 ~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P--~l~~~~~Dlp~v~~~a~~~~~ri~~~~gD~~~~ 199 (209)
+.+.+. .+.+..+|||||||+|.++..+++++| ..+++++|+.++. ...+++++.+|+.+.
T Consensus 13 ~~~~~~-~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----~~~~v~~~~~d~~~~ 75 (201)
T 2plw_A 13 LDNKYL-FLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----PIPNVYFIQGEIGKD 75 (201)
T ss_dssp HHHHHC-CCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----CCTTCEEEECCTTTT
T ss_pred HHHHcC-CCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----CCCCceEEEccccch
Confidence 444443 134567999999999999999999998 6899999996531 246799999999873
No 153
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.42 E-value=1.6e-07 Score=74.31 Aligned_cols=66 Identities=17% Similarity=0.142 Sum_probs=52.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----CCCCeEEEEccCCC---CCCC--CcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----DLVNLKYVGGDMFK---AISP--ADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~~~ri~~~~gD~~~---~~p~--~D~~~l 208 (209)
....+|||||||+|.++..+++..+. +++++|+ +.+++.|++ ...+++++.+|+.+ +++. +|+|+.
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 134 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILY 134 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCC-eEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEE
Confidence 35679999999999999999665543 8899999 788887775 24689999999865 4553 899975
No 154
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.41 E-value=7e-07 Score=69.95 Aligned_cols=68 Identities=21% Similarity=0.275 Sum_probs=53.3
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHHhhccc---CCCCeEEEEccCCCC-----CCC-CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAF-PKLECTCFDL-PHVVNGLES---DLVNLKYVGGDMFKA-----ISP-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~-P~l~~~~~Dl-p~v~~~a~~---~~~ri~~~~gD~~~~-----~p~-~D~~~l 208 (209)
..+..+|||+|||+|.++..++++. |..+++++|. +.+++.+++ ..++++++.+|+.+. ++. +|++++
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~ 149 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFE 149 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEE
Confidence 4466799999999999999999985 6789999999 555554432 237899999999872 233 899875
No 155
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.41 E-value=1.7e-07 Score=69.74 Aligned_cols=64 Identities=13% Similarity=0.064 Sum_probs=52.0
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----CCCCeEEEEccCCCCCC-------CCcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----DLVNLKYVGGDMFKAIS-------PADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~~~ri~~~~gD~~~~~p-------~~D~~~l 208 (209)
...+|||+|||+|.++..++++.++ ++++|+ +.+++.|++ ..-+++++.+|+.+..+ .+|++++
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~--v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~ 116 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE--AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFM 116 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE--EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEE
Confidence 5689999999999999999999887 999999 788887774 11289999999876322 4898875
No 156
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.41 E-value=2.3e-07 Score=74.29 Aligned_cols=68 Identities=15% Similarity=0.122 Sum_probs=56.0
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCC---C------CC-
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFP-KLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKA---I------SP- 202 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P-~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~---~------p~- 202 (209)
..+..+|||||||+|..+..+++..| +.+++.+|+ +.+++.|++ ..++|+++.+|..+- + +.
T Consensus 77 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 77 LINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS 156 (247)
T ss_dssp HTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred hhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCC
Confidence 34578999999999999999999998 789999999 788887764 246899999998752 2 33
Q ss_pred CcEEEe
Q 046346 203 ADAVVL 208 (209)
Q Consensus 203 ~D~~~l 208 (209)
+|++++
T Consensus 157 fD~V~~ 162 (247)
T 1sui_A 157 YDFIFV 162 (247)
T ss_dssp BSEEEE
T ss_pred EEEEEE
Confidence 999986
No 157
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.41 E-value=1e-06 Score=73.35 Aligned_cols=76 Identities=18% Similarity=0.295 Sum_probs=59.1
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHH-CCCCeEEEeec-hHHHhhcccC----------------CCCeEEE
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKA-FPKLECTCFDL-PHVVNGLESD----------------LVNLKYV 192 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~P~l~~~~~Dl-p~v~~~a~~~----------------~~ri~~~ 192 (209)
..++..++ .....+|||||||+|.++..+++. .|+.+++.+|+ |.+++.|++. .++++++
T Consensus 95 ~~~l~~l~--~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~ 172 (336)
T 2b25_A 95 NMILSMMD--INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFI 172 (336)
T ss_dssp HHHHHHHT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEE
T ss_pred HHHHHhcC--CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEE
Confidence 34455555 556789999999999999999998 68899999999 7778777641 2689999
Q ss_pred EccCCCC---CCC--CcEEEe
Q 046346 193 GGDMFKA---ISP--ADAVVL 208 (209)
Q Consensus 193 ~gD~~~~---~p~--~D~~~l 208 (209)
.+|+.+. ++. +|+|++
T Consensus 173 ~~d~~~~~~~~~~~~fD~V~~ 193 (336)
T 2b25_A 173 HKDISGATEDIKSLTFDAVAL 193 (336)
T ss_dssp ESCTTCCC-------EEEEEE
T ss_pred ECChHHcccccCCCCeeEEEE
Confidence 9999873 343 899885
No 158
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.41 E-value=7e-07 Score=75.83 Aligned_cols=64 Identities=19% Similarity=0.191 Sum_probs=52.4
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc------CCCCeEEEEccCCC-CCCC-CcEEE
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES------DLVNLKYVGGDMFK-AISP-ADAVV 207 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~------~~~ri~~~~gD~~~-~~p~-~D~~~ 207 (209)
..++|||||||+|.++...+++.. -+++.+|..++++.|++ ..++|+++.+|..+ ++|. +|+++
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA-~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~Dviv 154 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGA-RRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIV 154 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-SEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEE
T ss_pred CCCEEEEeCCCccHHHHHHHHhCC-CEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEE
Confidence 457999999999999987777643 37899999777777664 57899999999987 6786 99986
No 159
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.41 E-value=1.4e-06 Score=68.81 Aligned_cols=73 Identities=15% Similarity=0.184 Sum_probs=58.7
Q ss_pred HHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCCC-CC-
Q 046346 132 VMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKAI-SP- 202 (209)
Q Consensus 132 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~~-p~- 202 (209)
.++..++ .....+|||+|||+|.++..++++ ..+++++|. +.+++.|++ ..++++++.+|+.+.. +.
T Consensus 82 ~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 157 (248)
T 2yvl_A 82 YIALKLN--LNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEG 157 (248)
T ss_dssp HHHHHTT--CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTT
T ss_pred HHHHhcC--CCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCC
Confidence 4445554 556789999999999999999999 779999998 777877764 2378999999998865 43
Q ss_pred -CcEEEe
Q 046346 203 -ADAVVL 208 (209)
Q Consensus 203 -~D~~~l 208 (209)
+|++++
T Consensus 158 ~~D~v~~ 164 (248)
T 2yvl_A 158 IFHAAFV 164 (248)
T ss_dssp CBSEEEE
T ss_pred cccEEEE
Confidence 899875
No 160
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.41 E-value=8.5e-07 Score=73.42 Aligned_cols=76 Identities=17% Similarity=0.365 Sum_probs=59.4
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCCCCC--
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFP-KLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFKAIS-- 201 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P-~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~~~p-- 201 (209)
..+++.+. ..+..+|||||||+|.++..+++..+ +.+++++|+ +.+++.|++ ...+++++.+|+.+..+
T Consensus 65 ~~l~~~l~--~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~ 142 (317)
T 1dl5_A 65 ALFMEWVG--LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEF 142 (317)
T ss_dssp HHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGG
T ss_pred HHHHHhcC--CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccC
Confidence 33445554 55678999999999999999999988 488999999 788877764 13569999999987433
Q ss_pred -CCcEEEe
Q 046346 202 -PADAVVL 208 (209)
Q Consensus 202 -~~D~~~l 208 (209)
.+|+|+.
T Consensus 143 ~~fD~Iv~ 150 (317)
T 1dl5_A 143 SPYDVIFV 150 (317)
T ss_dssp CCEEEEEE
T ss_pred CCeEEEEE
Confidence 2899875
No 161
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.40 E-value=6.9e-07 Score=68.88 Aligned_cols=64 Identities=22% Similarity=0.308 Sum_probs=51.7
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccC----CCCeEEEEccCCCCCCC-CcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESD----LVNLKYVGGDMFKAISP-ADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~----~~ri~~~~gD~~~~~p~-~D~~~l 208 (209)
...+|||+|||+|.++..+++..+ .+++++|+ +.+++.+++. .-+++++.+|+.+ +|. +|++++
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~D~v~~ 118 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGA-KEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE-FNSRVDIVIM 118 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG-CCCCCSEEEE
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHH-cCCCCCEEEE
Confidence 467999999999999999998843 37999999 7888877641 1289999999976 454 899875
No 162
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.39 E-value=8.8e-07 Score=69.16 Aligned_cols=66 Identities=15% Similarity=0.237 Sum_probs=53.6
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccC----------CCCeEEEEccCCC-CCCC--CcEE
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESD----------LVNLKYVGGDMFK-AISP--ADAV 206 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~----------~~ri~~~~gD~~~-~~p~--~D~~ 206 (209)
+....+|||||||+|.++..++++ ..+++++|+ +.+++.+++. ..++++..+|+.+ +++. +|++
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 105 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFA 105 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEE
Confidence 346789999999999999999998 668999999 7788777641 2368999999987 5543 8998
Q ss_pred Ee
Q 046346 207 VL 208 (209)
Q Consensus 207 ~l 208 (209)
++
T Consensus 106 ~~ 107 (235)
T 3sm3_A 106 VM 107 (235)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 163
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.39 E-value=8e-07 Score=72.23 Aligned_cols=72 Identities=18% Similarity=0.187 Sum_probs=54.8
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc--CCCCeEEEEccCCC-CCC---CC
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES--DLVNLKYVGGDMFK-AIS---PA 203 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~--~~~ri~~~~gD~~~-~~p---~~ 203 (209)
..+++..+ .... +|||||||+|.++..++++. .+++++|+ +.+++.+++ ...+++++.+|+++ +++ .+
T Consensus 37 ~~Iv~~~~--~~~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~~ 111 (271)
T 3fut_A 37 RRIVEAAR--PFTG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQG 111 (271)
T ss_dssp HHHHHHHC--CCCS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCTT
T ss_pred HHHHHhcC--CCCC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccCc
Confidence 44555555 4455 99999999999999999986 57888998 777877765 24689999999987 454 35
Q ss_pred cEEE
Q 046346 204 DAVV 207 (209)
Q Consensus 204 D~~~ 207 (209)
|.++
T Consensus 112 ~~iv 115 (271)
T 3fut_A 112 SLLV 115 (271)
T ss_dssp EEEE
T ss_pred cEEE
Confidence 5543
No 164
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.39 E-value=1.8e-07 Score=72.57 Aligned_cols=67 Identities=19% Similarity=0.167 Sum_probs=54.9
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhhccc------CCCCeEEEEccCCC--C-CCCCcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFP-KLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFK--A-ISPADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P-~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~--~-~p~~D~~~l 208 (209)
.+..+|||||||+|..+..+++.+| +.+++.+|+ +.+++.|++ ..++++++.+|+.+ + .+.+|++++
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 132 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRDIDILFM 132 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCSEEEEEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCCCCEEEE
Confidence 3568999999999999999999998 889999999 788887764 34689999999875 2 222898875
No 165
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.39 E-value=2.3e-07 Score=75.43 Aligned_cols=75 Identities=15% Similarity=0.147 Sum_probs=57.2
Q ss_pred HHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc---------CCCCeEEEEccCCC-
Q 046346 130 TSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES---------DLVNLKYVGGDMFK- 198 (209)
Q Consensus 130 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~---------~~~ri~~~~gD~~~- 198 (209)
.+.+.+.++ ..+..+|||||||+|.++..++++.+ +++++|+ +.+++.|++ ...++.+..+|+.+
T Consensus 46 ~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~ 121 (293)
T 3thr_A 46 KAWLLGLLR--QHGCHRVLDVACGTGVDSIMLVEEGF--SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTL 121 (293)
T ss_dssp HHHHHHHHH--HTTCCEEEETTCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGH
T ss_pred HHHHHHHhc--ccCCCEEEEecCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhC
Confidence 344445554 44678999999999999999999954 8999999 788887753 12578899999877
Q ss_pred C---CC-C-CcEEEe
Q 046346 199 A---IS-P-ADAVVL 208 (209)
Q Consensus 199 ~---~p-~-~D~~~l 208 (209)
+ ++ . +|+|+.
T Consensus 122 ~~~~~~~~~fD~V~~ 136 (293)
T 3thr_A 122 DKDVPAGDGFDAVIC 136 (293)
T ss_dssp HHHSCCTTCEEEEEE
T ss_pred ccccccCCCeEEEEE
Confidence 4 34 3 999975
No 166
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.38 E-value=2.8e-07 Score=72.20 Aligned_cols=68 Identities=16% Similarity=0.134 Sum_probs=55.7
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCC---C------CCC
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFP-KLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKA---I------SPA 203 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P-~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~---~------p~~ 203 (209)
..+..+|||||||+|..+..+++..| ..+++++|. +.+++.|++ ..++++++.+|+.+. + ..+
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 34678999999999999999999988 789999999 788877764 247899999998652 2 238
Q ss_pred cEEEe
Q 046346 204 DAVVL 208 (209)
Q Consensus 204 D~~~l 208 (209)
|++++
T Consensus 147 D~v~~ 151 (229)
T 2avd_A 147 DVAVV 151 (229)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 99875
No 167
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.38 E-value=4.9e-07 Score=74.43 Aligned_cols=75 Identities=17% Similarity=0.311 Sum_probs=54.7
Q ss_pred HHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCC-CCCC
Q 046346 130 TSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFK-AISP 202 (209)
Q Consensus 130 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~-~~p~ 202 (209)
...+++.++ .....+|||||||+|.++..++++ ..+++++|+ +.+++.+++ ..++++++.+|+.+ +++.
T Consensus 31 ~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~~ 106 (299)
T 2h1r_A 31 LDKIIYAAK--IKSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFPK 106 (299)
T ss_dssp HHHHHHHHC--CCTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCCC
T ss_pred HHHHHHhcC--CCCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCccc
Confidence 345555555 456789999999999999999987 457999999 777877664 13689999999987 5556
Q ss_pred CcEEEe
Q 046346 203 ADAVVL 208 (209)
Q Consensus 203 ~D~~~l 208 (209)
+|+++.
T Consensus 107 ~D~Vv~ 112 (299)
T 2h1r_A 107 FDVCTA 112 (299)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 898874
No 168
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.38 E-value=6.9e-07 Score=70.51 Aligned_cols=57 Identities=16% Similarity=0.057 Sum_probs=46.4
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeech--HHHhhc---cc-----CCCCeEEEEccCCC
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLP--HVVNGL---ES-----DLVNLKYVGGDMFK 198 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp--~v~~~a---~~-----~~~ri~~~~gD~~~ 198 (209)
....+|||||||+|.++..+++++|+.+++++|+. .+++.| ++ ...+++|+.+|..+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~ 89 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAES 89 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTB
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHH
Confidence 45679999999999999999999999999999994 454544 43 23579999999854
No 169
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.38 E-value=9e-07 Score=69.27 Aligned_cols=68 Identities=18% Similarity=0.235 Sum_probs=55.5
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHC-----CCCeEEEeec-hHHHhhccc-----C-----CCCeEEEEccCCCCC----
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAF-----PKLECTCFDL-PHVVNGLES-----D-----LVNLKYVGGDMFKAI---- 200 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~-----P~l~~~~~Dl-p~v~~~a~~-----~-----~~ri~~~~gD~~~~~---- 200 (209)
..+..+|||||||+|.++..+++.. |..+++++|. +.+++.|++ . ..+++++.+|+.+..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 4456899999999999999999987 6789999999 777877764 1 468999999998754
Q ss_pred C---CCcEEEe
Q 046346 201 S---PADAVVL 208 (209)
Q Consensus 201 p---~~D~~~l 208 (209)
+ .+|+|+.
T Consensus 158 ~~~~~fD~I~~ 168 (227)
T 2pbf_A 158 KELGLFDAIHV 168 (227)
T ss_dssp HHHCCEEEEEE
T ss_pred ccCCCcCEEEE
Confidence 2 2899875
No 170
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.38 E-value=1.1e-06 Score=75.85 Aligned_cols=75 Identities=15% Similarity=0.267 Sum_probs=56.3
Q ss_pred HHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhc-------cc----C---CCCeEEEEccC
Q 046346 132 VMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGL-------ES----D---LVNLKYVGGDM 196 (209)
Q Consensus 132 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a-------~~----~---~~ri~~~~gD~ 196 (209)
.+++.+. .....+|||||||+|.++..+++.+|..+++++|+ +.+++.| ++ . ..+|+++.+|-
T Consensus 233 ~ml~~l~--l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~ 310 (433)
T 1u2z_A 233 DVYQQCQ--LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKS 310 (433)
T ss_dssp HHHHHTT--CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSC
T ss_pred HHHHhcC--CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCc
Confidence 3444444 55678999999999999999999999889999999 5666666 43 1 36899998854
Q ss_pred C-CC--C----CCCcEEEe
Q 046346 197 F-KA--I----SPADAVVL 208 (209)
Q Consensus 197 ~-~~--~----p~~D~~~l 208 (209)
+ .+ + ..+|+|++
T Consensus 311 ~~~~~~~~~~~~~FDvIvv 329 (433)
T 1u2z_A 311 FVDNNRVAELIPQCDVILV 329 (433)
T ss_dssp STTCHHHHHHGGGCSEEEE
T ss_pred cccccccccccCCCCEEEE
Confidence 4 32 2 23999986
No 171
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.38 E-value=4.8e-07 Score=68.32 Aligned_cols=72 Identities=24% Similarity=0.257 Sum_probs=56.6
Q ss_pred HHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCCC---CC
Q 046346 133 MIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKAI---SP 202 (209)
Q Consensus 133 ~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~~---p~ 202 (209)
+++.+. .....+|||+|||+|.++..+++.+ .+++++|. +.+++.+++ ..+++++..+|+.+++ +.
T Consensus 25 ~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 100 (192)
T 1l3i_A 25 IMCLAE--PGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPD 100 (192)
T ss_dssp HHHHHC--CCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCC
T ss_pred HHHhcC--CCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCC
Confidence 344444 4567899999999999999999988 78999999 778877764 2268999999987633 34
Q ss_pred CcEEEe
Q 046346 203 ADAVVL 208 (209)
Q Consensus 203 ~D~~~l 208 (209)
+|+++.
T Consensus 101 ~D~v~~ 106 (192)
T 1l3i_A 101 IDIAVV 106 (192)
T ss_dssp EEEEEE
T ss_pred CCEEEE
Confidence 899875
No 172
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.37 E-value=1e-06 Score=69.00 Aligned_cols=67 Identities=18% Similarity=0.250 Sum_probs=54.7
Q ss_pred ccCCCeEEEecCC-ccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----CCCCeEEEEccC--CCCCC-C-CcEEEe
Q 046346 141 FEGLNSLVDVGGG-TGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----DLVNLKYVGGDM--FKAIS-P-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG-~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~~~ri~~~~gD~--~~~~p-~-~D~~~l 208 (209)
..+..+||||||| +|.++..+++.+ ..+++++|+ +.+++.|++ ...+++++.+|+ +.+++ . +|+++.
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~ 129 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFS 129 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEE
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEE
Confidence 4567899999999 999999999997 788999999 788887774 223899999996 44555 3 899875
No 173
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.37 E-value=3.9e-07 Score=72.64 Aligned_cols=42 Identities=17% Similarity=0.120 Sum_probs=37.5
Q ss_pred CCCeEEEecCCccHHHHHHHHH--CCCCeEEEeec-hHHHhhccc
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKA--FPKLECTCFDL-PHVVNGLES 184 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~--~P~l~~~~~Dl-p~v~~~a~~ 184 (209)
...+|||+|||+|.++..++++ +|..+++++|+ +.+++.|+.
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~ 95 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAK 95 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHH
Confidence 4579999999999999999999 88889999999 788887774
No 174
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.37 E-value=7.1e-07 Score=70.31 Aligned_cols=67 Identities=13% Similarity=0.153 Sum_probs=52.9
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHH----HhhcccCCCCeEEEEccCCCC--C---CC-CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAF-PKLECTCFDL-PHV----VNGLESDLVNLKYVGGDMFKA--I---SP-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~-P~l~~~~~Dl-p~v----~~~a~~~~~ri~~~~gD~~~~--~---p~-~D~~~l 208 (209)
+.+..+|||||||+|.++..+++++ |..+++++|+ |.+ ++.++ ...+++++.+|+.+. + +. +|++++
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~-~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~ 153 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAK-KRTNIIPVIEDARHPHKYRMLIAMVDVIFA 153 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHH-HCTTEEEECSCTTCGGGGGGGCCCEEEEEE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhh-ccCCeEEEEcccCChhhhcccCCcEEEEEE
Confidence 4567899999999999999999997 7889999999 443 34444 237899999999873 2 22 899875
No 175
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.37 E-value=6e-07 Score=69.47 Aligned_cols=65 Identities=15% Similarity=0.134 Sum_probs=51.9
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----C-CCCeEEEEccCCC--CCC-C-CcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----D-LVNLKYVGGDMFK--AIS-P-ADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~-~~ri~~~~gD~~~--~~p-~-~D~~~l 208 (209)
...+|||+|||+|.++..++++.. .+++++|+ +.+++.|++ . .++++++.+|+.+ +.+ . +|++++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~ 128 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFV 128 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEE
Confidence 457999999999999999888764 38999999 788888774 1 2589999999876 332 3 899885
No 176
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.37 E-value=1.1e-06 Score=70.10 Aligned_cols=68 Identities=12% Similarity=0.308 Sum_probs=54.4
Q ss_pred HHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc---CCCCeEEEEccCCC-CCC
Q 046346 130 TSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES---DLVNLKYVGGDMFK-AIS 201 (209)
Q Consensus 130 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~---~~~ri~~~~gD~~~-~~p 201 (209)
...+++.++ .....+|||||||+|.++..++++. .+++++|+ +.+++.+++ ..++++++.+|+.+ +++
T Consensus 19 ~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~ 91 (244)
T 1qam_A 19 IDKIMTNIR--LNEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFP 91 (244)
T ss_dssp HHHHHTTCC--CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCC
T ss_pred HHHHHHhCC--CCCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcc
Confidence 345555555 4567899999999999999999997 67999999 778887765 23689999999987 555
No 177
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.37 E-value=9.2e-07 Score=68.74 Aligned_cols=84 Identities=17% Similarity=0.279 Sum_probs=55.6
Q ss_pred HHHHHHhhhHhhHHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEEccC
Q 046346 118 FNEAMASDARLATSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDM 196 (209)
Q Consensus 118 f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~ 196 (209)
|...+..+.......+++.++ .+..+|||||||+|.++..++++ + .+++++|. +.+++.+++.. .+++.+|+
T Consensus 10 y~~~~~~~~~~~~~~l~~~~~---~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~--~~~~~~d~ 82 (230)
T 3cc8_A 10 YEEKSGHYYNAVNPNLLKHIK---KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKL--DHVVLGDI 82 (230)
T ss_dssp ----------CCCHHHHTTCC---TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTS--SEEEESCT
T ss_pred hhccchhHHHHHHHHHHHHhc---cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhC--CcEEEcch
Confidence 333333333333345555554 45689999999999999999998 5 89999999 77888777432 37889998
Q ss_pred CC---CCC-C-CcEEEe
Q 046346 197 FK---AIS-P-ADAVVL 208 (209)
Q Consensus 197 ~~---~~p-~-~D~~~l 208 (209)
.+ +++ . +|++++
T Consensus 83 ~~~~~~~~~~~fD~v~~ 99 (230)
T 3cc8_A 83 ETMDMPYEEEQFDCVIF 99 (230)
T ss_dssp TTCCCCSCTTCEEEEEE
T ss_pred hhcCCCCCCCccCEEEE
Confidence 75 344 2 899875
No 178
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.37 E-value=6.4e-07 Score=72.69 Aligned_cols=68 Identities=21% Similarity=0.150 Sum_probs=56.6
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCCC-CCC-CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFKA-ISP-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~~-~p~-~D~~~l 208 (209)
+.+..+|||+|||+|.++..++++.+..+++++|+ |.+++.|++ ...+++++.+|+++. .+. +|++++
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~ 192 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIM 192 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEE
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEE
Confidence 45668999999999999999999999889999999 788887774 235789999999874 223 899886
No 179
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.36 E-value=2e-06 Score=70.82 Aligned_cols=90 Identities=18% Similarity=0.159 Sum_probs=61.9
Q ss_pred HHHHHHHHHhhhHhhHHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc---------
Q 046346 115 NNFFNEAMASDARLATSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES--------- 184 (209)
Q Consensus 115 ~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~--------- 184 (209)
.+.|+..+... ....+++.+........+|||||||+|.++..+++ .+..+++++|+ +.+++.+++
T Consensus 9 lr~~~~~~k~~---l~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~ 84 (313)
T 3bgv_A 9 LRNFNNWMKSV---LIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKK-GRINKLVCTDIADVSVKQCQQRYEDMKNRR 84 (313)
T ss_dssp HHHHHHHHHHH---HHHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHHSSS
T ss_pred hhhccHHHHHH---HHHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHh-cCCCEEEEEeCCHHHHHHHHHHHHHhhhcc
Confidence 45566666542 22334443332234678999999999999999988 46779999999 788877764
Q ss_pred ---CCCCeEEEEccCCC-C----C--C--CCcEEEe
Q 046346 185 ---DLVNLKYVGGDMFK-A----I--S--PADAVVL 208 (209)
Q Consensus 185 ---~~~ri~~~~gD~~~-~----~--p--~~D~~~l 208 (209)
...+++++.+|+.+ + + + .+|+|+.
T Consensus 85 ~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~ 120 (313)
T 3bgv_A 85 DSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSC 120 (313)
T ss_dssp CC-CCCEEEEEECCTTTSCSTTTCSSTTCCEEEEEE
T ss_pred cccccceEEEEEecccccchhhhcccCCCCEEEEEE
Confidence 12379999999976 3 3 2 3899874
No 180
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.36 E-value=2.6e-07 Score=73.02 Aligned_cols=64 Identities=22% Similarity=0.280 Sum_probs=52.9
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----C--CCCeEEEEccCCCCCC--CCcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----D--LVNLKYVGGDMFKAIS--PADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~--~~ri~~~~gD~~~~~p--~~D~~~l 208 (209)
...+|||||||+|.++..++++. .+++++|+ +.+++.|++ . .++++++.+|+.+..+ .+|+|++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~ 150 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFL 150 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEE
T ss_pred CCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEE
Confidence 56899999999999999999985 78999999 788887764 1 2589999999987323 3999985
No 181
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.36 E-value=4.8e-07 Score=72.90 Aligned_cols=67 Identities=18% Similarity=0.117 Sum_probs=57.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----CCCCeEEEEccCCCCCC-C-CcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----DLVNLKYVGGDMFKAIS-P-ADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~~~ri~~~~gD~~~~~p-~-~D~~~l 208 (209)
..+.+|||||||.|-++..++..+|+.+.+.+|+ +.+++.++. ...+.++...|+..+.| + +|++++
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~ 204 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLL 204 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEE
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHH
Confidence 4588999999999999999999999999999999 677877664 45668999999998655 4 999965
No 182
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.36 E-value=3.3e-07 Score=76.28 Aligned_cols=67 Identities=15% Similarity=0.204 Sum_probs=55.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc---C------CCCeEEEEccCCCC---CCC-CcEEE
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES---D------LVNLKYVGGDMFKA---ISP-ADAVV 207 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~---~------~~ri~~~~gD~~~~---~p~-~D~~~ 207 (209)
....+|||||||+|.++..+++..|..+++++|+ |.+++.|++ . .+|++++.+|.++. .+. +|+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 3568999999999999999999888899999999 788888775 1 46899999998762 233 89987
Q ss_pred e
Q 046346 208 L 208 (209)
Q Consensus 208 l 208 (209)
+
T Consensus 195 ~ 195 (321)
T 2pt6_A 195 V 195 (321)
T ss_dssp E
T ss_pred E
Confidence 4
No 183
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.35 E-value=6.1e-07 Score=69.39 Aligned_cols=65 Identities=18% Similarity=0.183 Sum_probs=52.2
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCC-CCCC-CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFK-AISP-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~-~~p~-~D~~~l 208 (209)
+.+..+|||||||+|.++..++++ ..+++++|+ +.+++.+++.. ++++..+|+.+ +.+. +|+|+.
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~-~~~~~~~d~~~~~~~~~fD~v~~ 108 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRL-GRPVRTMLFHQLDAIDAYDAVWA 108 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH-TSCCEECCGGGCCCCSCEEEEEE
T ss_pred cCCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhc-CCceEEeeeccCCCCCcEEEEEe
Confidence 445689999999999999999998 568999999 78888877422 67888999876 4333 899975
No 184
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.34 E-value=4.3e-07 Score=74.66 Aligned_cols=66 Identities=12% Similarity=0.145 Sum_probs=55.0
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-C--------CCCeEEEEccCCCC---CCC-CcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-D--------LVNLKYVGGDMFKA---ISP-ADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-~--------~~ri~~~~gD~~~~---~p~-~D~~~l 208 (209)
...+|||||||+|..+..+++..|..+++++|+ |.+++.|++ . .+|++++.+|.++. .+. +|+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 458999999999999999999888899999999 788887764 1 47999999997652 233 899975
No 185
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.34 E-value=4.3e-07 Score=72.14 Aligned_cols=68 Identities=15% Similarity=0.112 Sum_probs=56.0
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhhccc------CCCCeEEEEccCCC---CC------CC-
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFP-KLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFK---AI------SP- 202 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P-~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~---~~------p~- 202 (209)
..+..+|||||||+|..+..+++..| +.+++.+|+ +.+++.|++ ..++|+++.+|..+ .+ +.
T Consensus 68 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 68 LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGS 147 (237)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCC
Confidence 34678999999999999999999988 789999999 788887764 34689999999875 22 33
Q ss_pred CcEEEe
Q 046346 203 ADAVVL 208 (209)
Q Consensus 203 ~D~~~l 208 (209)
+|++++
T Consensus 148 fD~I~~ 153 (237)
T 3c3y_A 148 YDFGFV 153 (237)
T ss_dssp EEEEEE
T ss_pred cCEEEE
Confidence 899985
No 186
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.34 E-value=5.5e-07 Score=72.26 Aligned_cols=65 Identities=26% Similarity=0.381 Sum_probs=51.9
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----CCCCeEEEEccCCCCCC--CCcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----DLVNLKYVGGDMFKAIS--PADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~~~ri~~~~gD~~~~~p--~~D~~~l 208 (209)
.+..+|||+|||+|.++..+++..+ +++++|+ |.+++.+++ ..-.+++..+|+.+.+| .+|+++.
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD~Vv~ 190 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVA 190 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCCEEEE
Confidence 4568999999999999999999877 8999999 777877764 11128999999877553 3899874
No 187
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.33 E-value=5.1e-07 Score=74.45 Aligned_cols=67 Identities=16% Similarity=0.234 Sum_probs=55.6
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc---------CCCCeEEEEccCCC---C-CCC-CcEE
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES---------DLVNLKYVGGDMFK---A-ISP-ADAV 206 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~---------~~~ri~~~~gD~~~---~-~p~-~D~~ 206 (209)
....+|||||||+|.++..+++..|..+++++|+ |.+++.|++ ..+|++++.+|+.+ . .+. +|+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 4568999999999999999999888889999999 788887764 14789999999876 2 133 8999
Q ss_pred Ee
Q 046346 207 VL 208 (209)
Q Consensus 207 ~l 208 (209)
+.
T Consensus 174 i~ 175 (304)
T 3bwc_A 174 II 175 (304)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 188
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.33 E-value=5.2e-07 Score=76.51 Aligned_cols=67 Identities=21% Similarity=0.149 Sum_probs=56.6
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCC-CCC-C-CcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFK-AIS-P-ADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~-~~p-~-~D~~~l 208 (209)
.+..+|||+|||+|.++..+++..+..+++++|+ +.+++.|++ ..++|+++.+|+.+ +.+ . +|+|+.
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~ 292 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAIS 292 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEE
T ss_pred CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEE
Confidence 4568999999999999999999998778999999 788888775 23689999999987 444 3 899875
No 189
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.33 E-value=1.1e-06 Score=67.31 Aligned_cols=61 Identities=18% Similarity=0.197 Sum_probs=50.6
Q ss_pred eEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----CCCCeEEEEccCCC-CCCC--CcEEEe
Q 046346 146 SLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----DLVNLKYVGGDMFK-AISP--ADAVVL 208 (209)
Q Consensus 146 ~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~~~ri~~~~gD~~~-~~p~--~D~~~l 208 (209)
+|||||||+|.++..++++ ..+++++|. +.+++.+++ ...+++++.+|+.+ ++|. +|+++.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 100 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVS 100 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEE
T ss_pred CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEE
Confidence 9999999999999999987 568999999 778887764 13489999999987 5553 899874
No 190
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.33 E-value=2.1e-06 Score=69.54 Aligned_cols=66 Identities=17% Similarity=0.185 Sum_probs=53.3
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCC-CC-C-C-CcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFK-AI-S-P-ADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~-~~-p-~-~D~~~l 208 (209)
.+..+|||||||+|.++..+++. +..+++++|+ +.+++.|++ ...+++++.+|+.+ ++ + . +|+|+.
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 139 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISS 139 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEE
Confidence 46689999999999999998876 5668999999 788887764 12579999999987 55 3 3 899975
No 191
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.33 E-value=5.1e-07 Score=69.82 Aligned_cols=65 Identities=18% Similarity=0.166 Sum_probs=51.7
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----C-C--CCeEEEEccCCCC---C--CC-CcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----D-L--VNLKYVGGDMFKA---I--SP-ADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~-~--~ri~~~~gD~~~~---~--p~-~D~~~l 208 (209)
...+|||+|||+|.++..++++.+ .+++++|+ +.+++.|++ . . ++++++.+|+.+. + .. +|++++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQA-KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccC-CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 457999999999999999888754 57999999 788888774 1 2 6899999998762 1 24 799885
No 192
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.33 E-value=4.6e-07 Score=75.82 Aligned_cols=67 Identities=19% Similarity=0.240 Sum_probs=56.1
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-C--------CCCeEEEEccCCC---CCC-C-CcEE
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-D--------LVNLKYVGGDMFK---AIS-P-ADAV 206 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-~--------~~ri~~~~gD~~~---~~p-~-~D~~ 206 (209)
....+|||||||+|.++..+++..|..+++++|+ +.+++.|++ . .+|++++.+|+++ .++ . +|+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 4568999999999999999999888899999999 788888775 1 4689999999765 333 3 8999
Q ss_pred Ee
Q 046346 207 VL 208 (209)
Q Consensus 207 ~l 208 (209)
++
T Consensus 199 i~ 200 (334)
T 1xj5_A 199 IV 200 (334)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 193
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.33 E-value=1.6e-06 Score=67.73 Aligned_cols=68 Identities=21% Similarity=0.243 Sum_probs=54.6
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHHhhccc---C-------CCCeEEEEccCCCCCC---CCcE
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAF-PKLECTCFDL-PHVVNGLES---D-------LVNLKYVGGDMFKAIS---PADA 205 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~-P~l~~~~~Dl-p~v~~~a~~---~-------~~ri~~~~gD~~~~~p---~~D~ 205 (209)
..+..+|||||||+|..+..+++.+ |..+++++|+ +.+++.+++ . .++++++.+|+.+..+ .+|+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 3456899999999999999999985 7789999999 777877764 1 4589999999876432 2899
Q ss_pred EEe
Q 046346 206 VVL 208 (209)
Q Consensus 206 ~~l 208 (209)
++.
T Consensus 155 i~~ 157 (226)
T 1i1n_A 155 IHV 157 (226)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
No 194
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.32 E-value=4.7e-07 Score=74.79 Aligned_cols=67 Identities=16% Similarity=0.240 Sum_probs=56.0
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc---------CCCCeEEEEccCCC---CCCC-CcEEE
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES---------DLVNLKYVGGDMFK---AISP-ADAVV 207 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~---------~~~ri~~~~gD~~~---~~p~-~D~~~ 207 (209)
....+|||||||+|..+..++++.|..+++++|+ +.+++.|++ ..+|++++.+|.++ ..+. +|+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 4568999999999999999999988899999999 788887774 15799999999865 2233 89997
Q ss_pred e
Q 046346 208 L 208 (209)
Q Consensus 208 l 208 (209)
+
T Consensus 174 ~ 174 (304)
T 2o07_A 174 T 174 (304)
T ss_dssp E
T ss_pred E
Confidence 4
No 195
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.32 E-value=1.6e-06 Score=67.25 Aligned_cols=72 Identities=14% Similarity=0.095 Sum_probs=54.9
Q ss_pred HHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCC----C-CC-C-C
Q 046346 132 VMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFK----A-IS-P-A 203 (209)
Q Consensus 132 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~----~-~p-~-~ 203 (209)
.+++.+. .....+|||||||+|.++..++++ ..+++++|+ +.+++.+++. .++++..+|+.+ + .+ . +
T Consensus 43 ~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~f 117 (227)
T 3e8s_A 43 AILLAIL--GRQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAA-GAGEVHLASYAQLAEAKVPVGKDY 117 (227)
T ss_dssp HHHHHHH--HTCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHT-CSSCEEECCHHHHHTTCSCCCCCE
T ss_pred HHHHHhh--cCCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh-cccccchhhHHhhcccccccCCCc
Confidence 3444444 345689999999999999999998 568999999 7888888744 778888888754 1 22 3 8
Q ss_pred cEEEe
Q 046346 204 DAVVL 208 (209)
Q Consensus 204 D~~~l 208 (209)
|+|+.
T Consensus 118 D~v~~ 122 (227)
T 3e8s_A 118 DLICA 122 (227)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 99875
No 196
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.31 E-value=4.4e-07 Score=74.06 Aligned_cols=70 Identities=16% Similarity=0.273 Sum_probs=55.3
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCC--CeEEEeec-hHHHhhcccC-CCCeEEEEccCCC-CCCC
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPK--LECTCFDL-PHVVNGLESD-LVNLKYVGGDMFK-AISP 202 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~--l~~~~~Dl-p~v~~~a~~~-~~ri~~~~gD~~~-~~p~ 202 (209)
..+++.++ .....+|||||||+|.++..|+++.+. .+++++|+ +.+++.+++. .++++++.+|+++ +++.
T Consensus 32 ~~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~~ 106 (279)
T 3uzu_A 32 DAIVAAIR--PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFGS 106 (279)
T ss_dssp HHHHHHHC--CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGGG
T ss_pred HHHHHhcC--CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChhH
Confidence 44555555 556789999999999999999999765 56899999 7888877643 4689999999987 4543
No 197
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.31 E-value=5.8e-07 Score=71.07 Aligned_cols=65 Identities=17% Similarity=0.238 Sum_probs=52.9
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccC-----CCCeEEEEccCCC-CCCC--CcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESD-----LVNLKYVGGDMFK-AISP--ADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~-----~~ri~~~~gD~~~-~~p~--~D~~~l 208 (209)
...+|||||||+|.++..+++++ ..+++++|+ +.+++.|++. ..+++++.+|+.+ +.+. +|+|++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 152 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWI 152 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEE
Confidence 46899999999999999999987 568999999 7888877751 3469999999876 3443 899975
No 198
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.30 E-value=8e-07 Score=69.75 Aligned_cols=68 Identities=19% Similarity=0.268 Sum_probs=55.1
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCC------CCeEEEeec-hHHHhhcccC----------CCCeEEEEccCCCCCCC-
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFP------KLECTCFDL-PHVVNGLESD----------LVNLKYVGGDMFKAISP- 202 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P------~l~~~~~Dl-p~v~~~a~~~----------~~ri~~~~gD~~~~~p~- 202 (209)
..+..+|||||||+|.++..+++..+ ..+++++|+ +.+++.|++. ..+++++.+|..+++|.
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 161 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPN 161 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcC
Confidence 44567999999999999999999766 368999998 7778777641 46899999999876542
Q ss_pred --CcEEEe
Q 046346 203 --ADAVVL 208 (209)
Q Consensus 203 --~D~~~l 208 (209)
+|+|+.
T Consensus 162 ~~fD~I~~ 169 (227)
T 1r18_A 162 APYNAIHV 169 (227)
T ss_dssp CSEEEEEE
T ss_pred CCccEEEE
Confidence 899875
No 199
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.29 E-value=5.7e-07 Score=73.44 Aligned_cols=67 Identities=15% Similarity=0.171 Sum_probs=56.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-C--------CCCeEEEEccCCCC---CCC-CcEEE
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-D--------LVNLKYVGGDMFKA---ISP-ADAVV 207 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-~--------~~ri~~~~gD~~~~---~p~-~D~~~ 207 (209)
....+|||||||+|..+..+++..|..+++++|+ |.+++.|++ . .+|++++.+|..+. .+. +|+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 4568999999999999999999888899999999 788888775 1 47999999998762 244 89987
Q ss_pred e
Q 046346 208 L 208 (209)
Q Consensus 208 l 208 (209)
+
T Consensus 157 ~ 157 (283)
T 2i7c_A 157 V 157 (283)
T ss_dssp E
T ss_pred E
Confidence 5
No 200
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.28 E-value=4.8e-07 Score=71.54 Aligned_cols=67 Identities=16% Similarity=0.227 Sum_probs=54.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhhccc------CCCCeEEEEccCCC---CC------CCCc
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFP-KLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFK---AI------SPAD 204 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P-~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~---~~------p~~D 204 (209)
.+..+|||||||+|..+..+++..| +.+++.+|. |..++.|++ ..++|+++.+|+.+ .+ ..+|
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 3568999999999999999999998 789999999 777877764 24689999999754 22 2389
Q ss_pred EEEe
Q 046346 205 AVVL 208 (209)
Q Consensus 205 ~~~l 208 (209)
++++
T Consensus 151 ~V~~ 154 (232)
T 3cbg_A 151 LIFI 154 (232)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
No 201
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.27 E-value=1.7e-06 Score=66.80 Aligned_cols=61 Identities=18% Similarity=0.130 Sum_probs=50.6
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCC-eEEEeec-hHHHhhcccCCCCeEEEEccCCC-CCCC--CcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKL-ECTCFDL-PHVVNGLESDLVNLKYVGGDMFK-AISP--ADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l-~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~-~~p~--~D~~~l 208 (209)
...+|||||||+|.++..+ .. +++++|. +.+++.+++...+++++.+|+.+ +++. +|++++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 101 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLL 101 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEE
Confidence 6689999999999999888 44 8999999 78888887644789999999976 5543 899875
No 202
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.27 E-value=5.8e-07 Score=74.51 Aligned_cols=67 Identities=18% Similarity=0.161 Sum_probs=55.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-C---------CCCeEEEEccCCCC---CCC-CcEE
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-D---------LVNLKYVGGDMFKA---ISP-ADAV 206 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-~---------~~ri~~~~gD~~~~---~p~-~D~~ 206 (209)
....+|||||||+|..+..+++..|..+++++|+ |.+++.|++ . .+|++++.+|..+. .+. +|+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 4568999999999999999999888899999999 788887764 1 46899999998762 233 8998
Q ss_pred Ee
Q 046346 207 VL 208 (209)
Q Consensus 207 ~l 208 (209)
++
T Consensus 156 i~ 157 (314)
T 1uir_A 156 II 157 (314)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 203
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.27 E-value=6e-07 Score=74.51 Aligned_cols=67 Identities=18% Similarity=0.241 Sum_probs=55.9
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-C--------CCCeEEEEccCCCC---CCC-CcEEE
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-D--------LVNLKYVGGDMFKA---ISP-ADAVV 207 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-~--------~~ri~~~~gD~~~~---~p~-~D~~~ 207 (209)
....+|||||||+|..+..+++..|..+++++|+ |.+++.|++ . .+|++++.+|.++. .+. +|+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 3568999999999999999999888899999999 788888775 1 46899999998762 233 89998
Q ss_pred e
Q 046346 208 L 208 (209)
Q Consensus 208 l 208 (209)
+
T Consensus 187 ~ 187 (314)
T 2b2c_A 187 T 187 (314)
T ss_dssp E
T ss_pred E
Confidence 5
No 204
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.26 E-value=2.3e-06 Score=73.12 Aligned_cols=76 Identities=12% Similarity=0.022 Sum_probs=59.3
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCC--------------------------------------CeEEE
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPK--------------------------------------LECTC 172 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~--------------------------------------l~~~~ 172 (209)
..++.... |.+...|+|.+||+|.++++.+....+ .++++
T Consensus 191 a~ll~l~~--~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 268 (393)
T 3k0b_A 191 AALVLLTS--WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIG 268 (393)
T ss_dssp HHHHHHSC--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHhC--CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEE
Confidence 34445555 567789999999999999998876544 57999
Q ss_pred eec-hHHHhhccc------CCCCeEEEEccCCC-CCCC-CcEEEe
Q 046346 173 FDL-PHVVNGLES------DLVNLKYVGGDMFK-AISP-ADAVVL 208 (209)
Q Consensus 173 ~Dl-p~v~~~a~~------~~~ri~~~~gD~~~-~~p~-~D~~~l 208 (209)
+|+ +.+++.|+. ..++|+++.+|+++ +.+. +|+|+.
T Consensus 269 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~ 313 (393)
T 3k0b_A 269 GDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVA 313 (393)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEE
Confidence 999 788888774 34679999999987 3444 899875
No 205
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.26 E-value=1.8e-06 Score=69.75 Aligned_cols=51 Identities=14% Similarity=0.109 Sum_probs=41.7
Q ss_pred HHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc
Q 046346 130 TSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES 184 (209)
Q Consensus 130 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~ 184 (209)
...+++.++ ..+..+|||||||+|.++..++++ ..+++++|+ +.+++.|++
T Consensus 34 ~~~il~~l~--l~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~ 85 (261)
T 3iv6_A 34 RENDIFLEN--IVPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAE 85 (261)
T ss_dssp HHHHHHTTT--CCTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred HHHHHHhcC--CCCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHH
Confidence 345556555 566789999999999999999997 457999999 788988875
No 206
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.26 E-value=2.9e-06 Score=67.87 Aligned_cols=64 Identities=19% Similarity=0.245 Sum_probs=50.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCC-CCCC--CcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFK-AISP--ADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~-~~p~--~D~~~l 208 (209)
....+|||||||+|.++..++++ ..+++++|. +.+++.+++.... .++.+|+.+ +++. +|+++.
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~-~~~~~d~~~~~~~~~~fD~v~~ 120 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGVK-NVVEAKAEDLPFPSGAFEAVLA 120 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTCS-CEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcCC-CEEECcHHHCCCCCCCEEEEEE
Confidence 36689999999999999999987 568999999 7888887753222 288999876 5543 899875
No 207
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.25 E-value=2e-06 Score=73.33 Aligned_cols=76 Identities=16% Similarity=0.105 Sum_probs=59.1
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCC--------------------------------------CCeEEE
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFP--------------------------------------KLECTC 172 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P--------------------------------------~l~~~~ 172 (209)
..++.... +.+..+|+|.+||+|.++++++.... ..++++
T Consensus 185 a~ll~~~~--~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 262 (385)
T 3ldu_A 185 AGLIYLTP--WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYG 262 (385)
T ss_dssp HHHHHTSC--CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEE
T ss_pred HHHHHhhC--CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEE
Confidence 34455555 56678999999999999999887743 267999
Q ss_pred eec-hHHHhhccc------CCCCeEEEEccCCC-CCCC-CcEEEe
Q 046346 173 FDL-PHVVNGLES------DLVNLKYVGGDMFK-AISP-ADAVVL 208 (209)
Q Consensus 173 ~Dl-p~v~~~a~~------~~~ri~~~~gD~~~-~~p~-~D~~~l 208 (209)
+|+ +.+++.|+. ..++|+|..+|+++ +.|. +|+|+.
T Consensus 263 vDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~ 307 (385)
T 3ldu_A 263 YDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIIT 307 (385)
T ss_dssp EESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEE
Confidence 999 788888874 34589999999987 3444 899875
No 208
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.25 E-value=2.3e-06 Score=65.75 Aligned_cols=61 Identities=13% Similarity=0.421 Sum_probs=47.3
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhcccCCCCeEEEEccCCCC
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLESDLVNLKYVGGDMFKA 199 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~~~~ri~~~~gD~~~~ 199 (209)
..+.+.+. .+.+..+|||+|||+|.++..++++ ..+++++|+.+.. ...+++++.+|+.+.
T Consensus 14 ~ei~~~~~-~~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~-----~~~~v~~~~~D~~~~ 74 (191)
T 3dou_A 14 EFLLDRYR-VVRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME-----EIAGVRFIRCDIFKE 74 (191)
T ss_dssp HHHHHHHC-CSCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC-----CCTTCEEEECCTTSS
T ss_pred HHHHHHcC-CCCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc-----cCCCeEEEEccccCH
Confidence 34455554 2456789999999999999999998 7789999995431 246899999999873
No 209
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.24 E-value=1.6e-06 Score=70.51 Aligned_cols=67 Identities=16% Similarity=0.240 Sum_probs=52.7
Q ss_pred CCCeEEEecCCccH----HHHHHHHHCC----CCeEEEeec-hHHHhhcccC--------------------------C-
Q 046346 143 GLNSLVDVGGGTGT----AAKAIAKAFP----KLECTCFDL-PHVVNGLESD--------------------------L- 186 (209)
Q Consensus 143 ~~~~vlDvGgG~G~----~~~~l~~~~P----~l~~~~~Dl-p~v~~~a~~~--------------------------~- 186 (209)
+..+|+|+|||+|. +++.|++..| +.++++.|+ +.+++.|++. .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35799999999999 6777778766 468999999 7888887641 0
Q ss_pred ---------CCeEEEEccCCC-CCC--C-CcEEEeC
Q 046346 187 ---------VNLKYVGGDMFK-AIS--P-ADAVVLK 209 (209)
Q Consensus 187 ---------~ri~~~~gD~~~-~~p--~-~D~~~l~ 209 (209)
.+|+|..+|+.+ ++| . +|+|+.+
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~cr 220 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCR 220 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEEC
Confidence 379999999998 465 3 9999853
No 210
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.24 E-value=2.1e-06 Score=73.30 Aligned_cols=73 Identities=10% Similarity=0.074 Sum_probs=56.9
Q ss_pred HHHHHHhccccccCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHHhhcccCCCCeEEEEccCCCCCC--CCcE
Q 046346 130 TSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAF-PKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFKAIS--PADA 205 (209)
Q Consensus 130 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~~~p--~~D~ 205 (209)
+..+++.+. .....+|||+|||+|.++..+++++ +..+++++|+ |.+++.| .+++++.+|+++..+ .+|+
T Consensus 28 ~~~~~~~~~--~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----~~~~~~~~D~~~~~~~~~fD~ 101 (421)
T 2ih2_A 28 VDFMVSLAE--APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----PWAEGILADFLLWEPGEAFDL 101 (421)
T ss_dssp HHHHHHHCC--CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----TTEEEEESCGGGCCCSSCEEE
T ss_pred HHHHHHhhc--cCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----CCCcEEeCChhhcCccCCCCE
Confidence 344445444 2345699999999999999999988 7789999999 6666655 689999999988433 3999
Q ss_pred EEe
Q 046346 206 VVL 208 (209)
Q Consensus 206 ~~l 208 (209)
|+.
T Consensus 102 Ii~ 104 (421)
T 2ih2_A 102 ILG 104 (421)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
No 211
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.24 E-value=6.6e-07 Score=72.96 Aligned_cols=66 Identities=18% Similarity=0.252 Sum_probs=54.0
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-C--------------CCCeEEEEccCCCCC--CC-
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-D--------------LVNLKYVGGDMFKAI--SP- 202 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-~--------------~~ri~~~~gD~~~~~--p~- 202 (209)
....+|||||||+|..+..+++. |..+++++|+ |.+++.|++ . .+|++++.+|..+-+ +.
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 35689999999999999999998 8889999999 788887764 2 468999999976521 43
Q ss_pred CcEEEe
Q 046346 203 ADAVVL 208 (209)
Q Consensus 203 ~D~~~l 208 (209)
+|+|++
T Consensus 153 fD~Ii~ 158 (281)
T 1mjf_A 153 FDVIIA 158 (281)
T ss_dssp EEEEEE
T ss_pred eeEEEE
Confidence 899875
No 212
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.23 E-value=2.6e-06 Score=63.18 Aligned_cols=62 Identities=18% Similarity=0.268 Sum_probs=51.0
Q ss_pred cCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeechHHHhhcccCCCCeEEEEccCCC-C--------CCC--CcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAF-PKLECTCFDLPHVVNGLESDLVNLKYVGGDMFK-A--------ISP--ADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~-P~l~~~~~Dlp~v~~~a~~~~~ri~~~~gD~~~-~--------~p~--~D~~~l 208 (209)
....+|||||||+|.++..+++++ |+.+++++|+.++++ ..+++++.+|+.+ + ++. +|+++.
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~ 94 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDP-----IVGVDFLQGDFRDELVMKALLERVGDSKVQVVMS 94 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCC-----CTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECccccc-----cCcEEEEEcccccchhhhhhhccCCCCceeEEEE
Confidence 456799999999999999999995 789999999966332 2789999999987 3 552 899875
No 213
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.22 E-value=1.6e-06 Score=66.62 Aligned_cols=66 Identities=15% Similarity=0.157 Sum_probs=51.4
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----CCCCeEEEEccCCC-CCCC--CcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----DLVNLKYVGGDMFK-AISP--ADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~~~ri~~~~gD~~~-~~p~--~D~~~l 208 (209)
....+|||||||+|..+..++.. +..+++++|. +.+++.+++ ...+++++.+|+.+ ++|. +|+++.
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 95 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYS 95 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEE
Confidence 45689999999999986555544 5679999999 788887764 24689999999987 5543 899875
No 214
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.22 E-value=1.9e-06 Score=69.67 Aligned_cols=65 Identities=14% Similarity=0.028 Sum_probs=54.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccC---------CCCeEEEEccCCCCCCCCcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESD---------LVNLKYVGGDMFKAISPADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~---------~~ri~~~~gD~~~~~p~~D~~~l 208 (209)
+.+.+|||||||+|..+..+++. + .+++++|+ |.+++.|++. .+|++++.+|.++-+..+|+|++
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~~~fD~Ii~ 145 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFC 145 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHHhhCCEEEE
Confidence 45689999999999999999998 8 89999999 7889888751 36899999998764433899975
No 215
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.21 E-value=2.3e-06 Score=68.61 Aligned_cols=70 Identities=26% Similarity=0.368 Sum_probs=55.0
Q ss_pred HHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccC-CCCeEEEEccCCC-CCCC
Q 046346 130 TSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESD-LVNLKYVGGDMFK-AISP 202 (209)
Q Consensus 130 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~-~~ri~~~~gD~~~-~~p~ 202 (209)
...+++.++ .....+|||||||+|.++..++++ +..+++++|+ +.+++.+++. ..+++++.+|+.+ +++.
T Consensus 20 ~~~iv~~~~--~~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~ 92 (249)
T 3ftd_A 20 LKKIAEELN--IEEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFCS 92 (249)
T ss_dssp HHHHHHHTT--CCTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGG
T ss_pred HHHHHHhcC--CCCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhH
Confidence 345566665 556789999999999999999987 5678999999 6778777643 4589999999987 5553
No 216
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.21 E-value=3.9e-06 Score=71.46 Aligned_cols=76 Identities=16% Similarity=0.086 Sum_probs=59.2
Q ss_pred HHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCC--------------------------------------CeEEE
Q 046346 131 SVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPK--------------------------------------LECTC 172 (209)
Q Consensus 131 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~--------------------------------------l~~~~ 172 (209)
..++.... |.+...|+|.+||+|.++++.+....+ .++++
T Consensus 184 aall~l~~--~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~G 261 (384)
T 3ldg_A 184 AAIILLSN--WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISG 261 (384)
T ss_dssp HHHHHHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHhC--CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEE
Confidence 33445445 567789999999999999998876544 57999
Q ss_pred eec-hHHHhhccc------CCCCeEEEEccCCC-CCCC-CcEEEe
Q 046346 173 FDL-PHVVNGLES------DLVNLKYVGGDMFK-AISP-ADAVVL 208 (209)
Q Consensus 173 ~Dl-p~v~~~a~~------~~~ri~~~~gD~~~-~~p~-~D~~~l 208 (209)
+|+ +.+++.|+. ..++|+++.+|+++ +.+. +|+++.
T Consensus 262 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~ 306 (384)
T 3ldg_A 262 FDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLIS 306 (384)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEE
Confidence 999 788888774 35689999999987 4444 899875
No 217
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.21 E-value=4e-06 Score=72.40 Aligned_cols=66 Identities=17% Similarity=0.242 Sum_probs=53.6
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCCCCC-------CCcEEE
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFKAIS-------PADAVV 207 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~~~p-------~~D~~~ 207 (209)
..+..+|||+|||+|.++..++++ ..+++++|. +.+++.|++ ...+++|+.+|+++.++ .+|+++
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv 361 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVL 361 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEE
T ss_pred CCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEE
Confidence 445679999999999999999988 678999999 788887764 23589999999987332 289988
Q ss_pred e
Q 046346 208 L 208 (209)
Q Consensus 208 l 208 (209)
+
T Consensus 362 ~ 362 (433)
T 1uwv_A 362 L 362 (433)
T ss_dssp E
T ss_pred E
Confidence 5
No 218
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.20 E-value=2.3e-06 Score=68.93 Aligned_cols=65 Identities=14% Similarity=0.239 Sum_probs=53.0
Q ss_pred HHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc---CCCCeEEEEccCCC
Q 046346 130 TSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES---DLVNLKYVGGDMFK 198 (209)
Q Consensus 130 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~---~~~ri~~~~gD~~~ 198 (209)
...+++.++ .....+|||||||+|.++..++++. .+++++|+ +.+++.+++ ..++++++.+|+++
T Consensus 18 ~~~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~ 86 (255)
T 3tqs_A 18 LQKIVSAIH--PQKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQ 86 (255)
T ss_dssp HHHHHHHHC--CCTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTT
T ss_pred HHHHHHhcC--CCCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHh
Confidence 345566665 5567899999999999999999985 57899999 788887765 24799999999987
No 219
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.18 E-value=4e-06 Score=65.27 Aligned_cols=57 Identities=14% Similarity=0.138 Sum_probs=47.5
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCC-CCCC--CcEEEe
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFK-AISP--ADAVVL 208 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~-~~p~--~D~~~l 208 (209)
..+|||||||+|.++..++++ +++|. +.+++.+++. +++++.+|+.+ +++. +|++++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~v~~ 108 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR--GVFVLKGTAENLPLKDESFDFALM 108 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT--TCEEEECBTTBCCSCTTCEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc--CCEEEEcccccCCCCCCCeeEEEE
Confidence 789999999999999998765 88998 7888887744 79999999876 4443 899875
No 220
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.15 E-value=6.3e-06 Score=70.12 Aligned_cols=64 Identities=19% Similarity=0.232 Sum_probs=52.5
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----CCCCeEEEEccCCCC-CC-C-CcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----DLVNLKYVGGDMFKA-IS-P-ADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~~~ri~~~~gD~~~~-~p-~-~D~~~l 208 (209)
...+|||+|||+|.++..++++ +.+++++|. +.+++.|++ ...+++++.+|+++. .+ . +|+|+.
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~ 304 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVT 304 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEE
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEE
Confidence 4679999999999999999998 568999999 788887774 233599999999884 33 3 999985
No 221
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.15 E-value=2.7e-06 Score=70.45 Aligned_cols=68 Identities=12% Similarity=0.167 Sum_probs=54.6
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCC-C-CCC-CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFP-KLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFK-A-ISP-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P-~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~-~-~p~-~D~~~l 208 (209)
.....+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++ ...+++++.+|+.+ + .+. +|+|++
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~ 193 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILL 193 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEE
Confidence 45668999999999999999999975 578999999 677777664 23479999999876 2 333 899885
No 222
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.10 E-value=8.1e-06 Score=62.08 Aligned_cols=63 Identities=16% Similarity=0.227 Sum_probs=49.7
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCC---------CeEEEeechHHHhhcccCCCCeEEE-EccCCCC---------CC
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPK---------LECTCFDLPHVVNGLESDLVNLKYV-GGDMFKA---------IS 201 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~---------l~~~~~Dlp~v~~~a~~~~~ri~~~-~gD~~~~---------~p 201 (209)
+.+..+|||||||+|.++..+++++|. .+++++|+.++. ...+++++ .+|+.+. ++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----PLEGATFLCPADVTDPRTSQRILEVLP 94 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----CCTTCEEECSCCTTSHHHHHHHHHHSG
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----cCCCCeEEEeccCCCHHHHHHHHHhcC
Confidence 345689999999999999999999875 799999996531 13578999 9998762 23
Q ss_pred --CCcEEEe
Q 046346 202 --PADAVVL 208 (209)
Q Consensus 202 --~~D~~~l 208 (209)
.+|+|+.
T Consensus 95 ~~~fD~V~~ 103 (196)
T 2nyu_A 95 GRRADVILS 103 (196)
T ss_dssp GGCEEEEEE
T ss_pred CCCCcEEEe
Confidence 3899874
No 223
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.08 E-value=4.6e-06 Score=74.50 Aligned_cols=66 Identities=14% Similarity=0.154 Sum_probs=52.3
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc---C--CCCeEEEEccCCC---CC-CC-CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES---D--LVNLKYVGGDMFK---AI-SP-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~---~--~~ri~~~~gD~~~---~~-p~-~D~~~l 208 (209)
+.++.+|||||||.|.++..+++. +.+++++|+ +.+|+.|+. . .-+|+|..+|..+ +. +. ||+|+.
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~ 140 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIG 140 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEE
T ss_pred cCCCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEE
Confidence 345679999999999999999998 678999999 788888774 2 2369999998754 33 33 999863
No 224
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.06 E-value=1.2e-05 Score=63.86 Aligned_cols=68 Identities=19% Similarity=0.222 Sum_probs=54.6
Q ss_pred ccCCCeEEEecCCccHHHHHHHHH-CCCCeEEEeec-hHHHhhccc---CCCCeEEEEccCCCC--CC---C-CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKA-FPKLECTCFDL-PHVVNGLES---DLVNLKYVGGDMFKA--IS---P-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~-~P~l~~~~~Dl-p~v~~~a~~---~~~ri~~~~gD~~~~--~p---~-~D~~~l 208 (209)
..+..+|||+|||+|.++..+++. .|+=+++.+|+ |.+++.+++ ...++..+.+|..++ .| . +|++++
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~ 153 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYA 153 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEE
Confidence 567899999999999999999998 59999999999 788877654 346799999988762 12 2 787764
No 225
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.06 E-value=4.5e-06 Score=67.04 Aligned_cols=68 Identities=12% Similarity=0.145 Sum_probs=51.4
Q ss_pred HHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccC---CCCeEEEEccCCC-CCC
Q 046346 130 TSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESD---LVNLKYVGGDMFK-AIS 201 (209)
Q Consensus 130 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~---~~ri~~~~gD~~~-~~p 201 (209)
...+++.+. .....+|||||||+|.++. +. +.++.+++++|+ +.+++.+++. .++++++.+|+.+ +++
T Consensus 10 ~~~iv~~~~--~~~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~ 82 (252)
T 1qyr_A 10 IDSIVSAIN--PQKGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFG 82 (252)
T ss_dssp HHHHHHHHC--CCTTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHH
T ss_pred HHHHHHhcC--CCCcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHH
Confidence 345566555 5566899999999999999 64 555555999999 7888887752 2589999999987 443
No 226
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.03 E-value=2.6e-06 Score=69.01 Aligned_cols=68 Identities=16% Similarity=0.200 Sum_probs=54.3
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCC-CeEEEeec-hHHHhhccc-----CCCCeEEEEccCCC-CC-----CC-CcEE
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPK-LECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFK-AI-----SP-ADAV 206 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~-l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~-~~-----p~-~D~~ 206 (209)
.....+|||+|||+|..+..+++..++ .+++++|+ +..++.+++ ...+++++.+|+.+ +. +. +|+|
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEE
Confidence 445689999999999999999999887 78999999 677776654 13489999999876 21 33 8998
Q ss_pred Ee
Q 046346 207 VL 208 (209)
Q Consensus 207 ~l 208 (209)
++
T Consensus 161 l~ 162 (274)
T 3ajd_A 161 LL 162 (274)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 227
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.02 E-value=2.8e-06 Score=68.47 Aligned_cols=66 Identities=18% Similarity=0.223 Sum_probs=51.8
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-h-------HHHhhccc------CCCCeEEEEccCCCC---CC--
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-P-------HVVNGLES------DLVNLKYVGGDMFKA---IS-- 201 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p-------~v~~~a~~------~~~ri~~~~gD~~~~---~p-- 201 (209)
.....+|||+|||+|..+..+++. ..+++.+|+ | .+++.|++ ...||+++.+|+.+- ++
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~ 158 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKT 158 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhcc
Confidence 345679999999999999999997 468999999 6 66666653 236799999998762 33
Q ss_pred -C-CcEEEe
Q 046346 202 -P-ADAVVL 208 (209)
Q Consensus 202 -~-~D~~~l 208 (209)
. +|+|++
T Consensus 159 ~~~fD~V~~ 167 (258)
T 2r6z_A 159 QGKPDIVYL 167 (258)
T ss_dssp HCCCSEEEE
T ss_pred CCCccEEEE
Confidence 3 899986
No 228
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.02 E-value=8.1e-06 Score=66.50 Aligned_cols=67 Identities=18% Similarity=0.069 Sum_probs=54.3
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCCCC--CCcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKAIS--PADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~~p--~~D~~~l 208 (209)
.....+|||+|||+|.+++.++++ ...+++.+|+ |.+++.+++ ..++|+++.+|.++-.+ .+|.|+|
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~ 198 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILM 198 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEE
T ss_pred cCCCCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEE
Confidence 346789999999999999999987 4568999999 777877664 56899999999987333 3898876
No 229
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.01 E-value=2.3e-06 Score=68.11 Aligned_cols=68 Identities=16% Similarity=0.339 Sum_probs=54.3
Q ss_pred HHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccC---CCCeEEEEccCCC-CCC
Q 046346 130 TSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESD---LVNLKYVGGDMFK-AIS 201 (209)
Q Consensus 130 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~---~~ri~~~~gD~~~-~~p 201 (209)
...+++.++ .....+|||||||+|.++..++++. .+++++|+ +.+++.+++. .++++++.+|+.+ +++
T Consensus 18 ~~~i~~~~~--~~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~ 90 (245)
T 1yub_A 18 LNQIIKQLN--LKETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFP 90 (245)
T ss_dssp HHHHHHHCC--CCSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCC
T ss_pred HHHHHHhcC--CCCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcc
Confidence 345566665 5567899999999999999999996 78999999 6778777652 3689999999987 554
No 230
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.01 E-value=7.8e-06 Score=66.14 Aligned_cols=65 Identities=17% Similarity=0.068 Sum_probs=48.1
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc-CC------CCeEEE--EccCCCCCCC-CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES-DL------VNLKYV--GGDMFKAISP-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~-~~------~ri~~~--~gD~~~~~p~-~D~~~l 208 (209)
+.+..+|||||||+|.++..++++ .+++++|+.+++..+++ .. .+++++ .+|+.+--+. +|+++.
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~V~s 146 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLPVERTDVIMC 146 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCCCCCCcEEEE
Confidence 445689999999999999999887 57999999656433321 11 178999 9999761133 899874
No 231
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.01 E-value=2.2e-05 Score=63.79 Aligned_cols=66 Identities=21% Similarity=0.240 Sum_probs=48.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec--hHHHhhcccCC---------------CCeEEEEccCCCC---C-
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL--PHVVNGLESDL---------------VNLKYVGGDMFKA---I- 200 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl--p~v~~~a~~~~---------------~ri~~~~gD~~~~---~- 200 (209)
....+|||||||+|.++..+++.. ..+++++|+ +.+++.|++.. +++++...|+.+. +
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 456799999999999999988864 348999999 57777665311 4788887665442 2
Q ss_pred ----CC-CcEEEe
Q 046346 201 ----SP-ADAVVL 208 (209)
Q Consensus 201 ----p~-~D~~~l 208 (209)
+. +|+|++
T Consensus 157 ~~~~~~~fD~Ii~ 169 (281)
T 3bzb_A 157 RCTGLQRFQVVLL 169 (281)
T ss_dssp HHHSCSSBSEEEE
T ss_pred hhccCCCCCEEEE
Confidence 23 899875
No 232
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.00 E-value=2.9e-05 Score=61.53 Aligned_cols=76 Identities=13% Similarity=0.130 Sum_probs=55.3
Q ss_pred HHHHhccc-cccCCCeEEEecCCccHHHHHHHHH-CCCCeEEEeec-hHHH----hhcccCCCCeEEEEccCCCC-----
Q 046346 132 VMIQKCKN-VFEGLNSLVDVGGGTGTAAKAIAKA-FPKLECTCFDL-PHVV----NGLESDLVNLKYVGGDMFKA----- 199 (209)
Q Consensus 132 ~~~~~~~~-~~~~~~~vlDvGgG~G~~~~~l~~~-~P~l~~~~~Dl-p~v~----~~a~~~~~ri~~~~gD~~~~----- 199 (209)
.++..++. .+.+..+|||+|||+|..+..+++. .|+-+++.+|+ |.++ +.++ ...++.++.+|...+
T Consensus 64 ~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~-~r~nv~~i~~Da~~~~~~~~ 142 (232)
T 3id6_C 64 AILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQ-RRPNIFPLLADARFPQSYKS 142 (232)
T ss_dssp HHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHH-HCTTEEEEECCTTCGGGTTT
T ss_pred HHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhh-hcCCeEEEEcccccchhhhc
Confidence 34444431 1456789999999999999999987 46889999999 5443 3443 246899999998763
Q ss_pred CCC-CcEEEe
Q 046346 200 ISP-ADAVVL 208 (209)
Q Consensus 200 ~p~-~D~~~l 208 (209)
++. +|+++.
T Consensus 143 ~~~~~D~I~~ 152 (232)
T 3id6_C 143 VVENVDVLYV 152 (232)
T ss_dssp TCCCEEEEEE
T ss_pred cccceEEEEe
Confidence 223 899875
No 233
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=97.99 E-value=5.8e-06 Score=69.02 Aligned_cols=64 Identities=20% Similarity=0.175 Sum_probs=51.7
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCC-CeEEEEccCCCCC------C-CCcEEE
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLV-NLKYVGGDMFKAI------S-PADAVV 207 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~-ri~~~~gD~~~~~------p-~~D~~~ 207 (209)
...+|||+|||+|.++..+++... +++.+|+ +.+++.|++ ..+ +++++.+|+++.+ . .+|+|+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga--~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGA--EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCcEEEcccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 457999999999999999999754 8999999 788887764 233 5999999998722 2 399998
Q ss_pred e
Q 046346 208 L 208 (209)
Q Consensus 208 l 208 (209)
+
T Consensus 231 ~ 231 (332)
T 2igt_A 231 T 231 (332)
T ss_dssp E
T ss_pred E
Confidence 6
No 234
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=97.99 E-value=2.6e-06 Score=67.79 Aligned_cols=65 Identities=18% Similarity=0.131 Sum_probs=50.9
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-C-CC--------------------------------
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-D-LV-------------------------------- 187 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-~-~~-------------------------------- 187 (209)
...+|||||||+|.++..+++..+ .+++++|. +.+++.+++ . ..
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 457999999999999999998877 67899999 677877764 1 11
Q ss_pred Ce-EEEEccCCCCC---C---C-CcEEEe
Q 046346 188 NL-KYVGGDMFKAI---S---P-ADAVVL 208 (209)
Q Consensus 188 ri-~~~~gD~~~~~---p---~-~D~~~l 208 (209)
++ +++.+|+.+.. + . +|+|+.
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~ 163 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLS 163 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEE
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEE
Confidence 28 99999998732 2 3 899875
No 235
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=97.99 E-value=7.6e-06 Score=66.60 Aligned_cols=64 Identities=22% Similarity=0.123 Sum_probs=48.2
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc-CC------CCeEEE--EccCCCCCC-C-CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES-DL------VNLKYV--GGDMFKAIS-P-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~-~~------~ri~~~--~gD~~~~~p-~-~D~~~l 208 (209)
+.+..+|||||||+|.++..++++ -+++++|+.+++..+++ .. .+++++ .+|+.+ +| . +|+++.
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~-l~~~~fD~Vvs 154 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTK-MEPFQADTVLC 154 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGG-CCCCCCSEEEE
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhh-CCCCCcCEEEE
Confidence 445689999999999999999988 57999999656443332 11 178999 999876 33 3 899874
No 236
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=97.98 E-value=3.3e-05 Score=66.55 Aligned_cols=64 Identities=16% Similarity=0.169 Sum_probs=52.3
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCCCCCC-CcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFKAISP-ADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~~~p~-~D~~~l 208 (209)
.+..+|||+|||+|.++..+++. ..+++++|. +.+++.|++ ... ++|+.+|+++-.+. +|++++
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~~~fD~Vv~ 359 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSVKGFDTVIV 359 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCCTTCSEEEE
T ss_pred CCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCccCCCEEEE
Confidence 35689999999999999999987 457999999 788887764 123 99999999885554 899886
No 237
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.96 E-value=2.2e-05 Score=64.38 Aligned_cols=68 Identities=19% Similarity=0.211 Sum_probs=57.3
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----------CCCCeEEEEccCCCC---CCC-CcE
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----------DLVNLKYVGGDMFKA---ISP-ADA 205 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----------~~~ri~~~~gD~~~~---~p~-~D~ 205 (209)
.+.+++||-||||.|..+.++++..|-.+++++|+ |.|++.+++ ..+|++.+.+|.++- -+. +|+
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDv 160 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEE
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCE
Confidence 35689999999999999999998888889999999 889988875 257999999998872 223 899
Q ss_pred EEe
Q 046346 206 VVL 208 (209)
Q Consensus 206 ~~l 208 (209)
|++
T Consensus 161 Ii~ 163 (294)
T 3o4f_A 161 IIS 163 (294)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
No 238
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=97.93 E-value=1.3e-05 Score=66.88 Aligned_cols=64 Identities=19% Similarity=0.202 Sum_probs=52.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCCCCCCcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKAISPADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~~p~~D~~~l 208 (209)
....+|||+|||+|.++.. ++ +..+++.+|+ |.+++.+++ ..++++++.+|+++-...+|++++
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~~~fD~Vi~ 264 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVDVKGNRVIM 264 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCCCCEEEEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhcCCCcEEEE
Confidence 3568999999999999999 77 5778999999 788887764 236899999999875544899886
No 239
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.93 E-value=1.5e-05 Score=63.16 Aligned_cols=55 Identities=9% Similarity=0.026 Sum_probs=39.0
Q ss_pred HHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCC
Q 046346 132 VMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVN 188 (209)
Q Consensus 132 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~r 188 (209)
.+++.+.. -....+|||||||+|.++..++++ ...+++++|+ +.+++.+++...+
T Consensus 27 ~~L~~~~~-~~~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~~~ 82 (232)
T 3opn_A 27 KALKEFHL-EINGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSDER 82 (232)
T ss_dssp HHHHHTTC-CCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTCTT
T ss_pred HHHHHcCC-CCCCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhCcc
Confidence 34444441 124579999999999999999998 3348999999 6777765543333
No 240
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=97.92 E-value=1.8e-05 Score=68.59 Aligned_cols=68 Identities=24% Similarity=0.266 Sum_probs=54.9
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCC-CeEEEeec-hHHHhhccc-----CCCCeEEEEccCCCC---CC-C-CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPK-LECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFKA---IS-P-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~-l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~~---~p-~-~D~~~l 208 (209)
.....+|||+|||+|..+..+++..++ .+++++|+ +..++.+++ ...+++++.+|+.+. ++ . +|+|++
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEE
Confidence 445679999999999999999999987 79999999 666766553 235799999999762 44 4 899985
No 241
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=97.91 E-value=9.3e-06 Score=62.79 Aligned_cols=61 Identities=21% Similarity=0.332 Sum_probs=44.9
Q ss_pred HHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhcccCCCCeEEEEccCCC-CCCC--CcEEEe
Q 046346 133 MIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLESDLVNLKYVGGDMFK-AISP--ADAVVL 208 (209)
Q Consensus 133 ~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~~~~ri~~~~gD~~~-~~p~--~D~~~l 208 (209)
+++.+.. .....+|||||||+|.++..++ .+++++|..+. +++++.+|+.+ +++. +|+++.
T Consensus 58 ~~~~l~~-~~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~---------~~~~~~~d~~~~~~~~~~fD~v~~ 121 (215)
T 2zfu_A 58 IARDLRQ-RPASLVVADFGCGDCRLASSIR-----NPVHCFDLASL---------DPRVTVCDMAQVPLEDESVDVAVF 121 (215)
T ss_dssp HHHHHHT-SCTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS---------STTEEESCTTSCSCCTTCEEEEEE
T ss_pred HHHHHhc-cCCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC---------CceEEEeccccCCCCCCCEeEEEE
Confidence 4444431 3456899999999999998883 57888997433 67888999877 5543 899875
No 242
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.90 E-value=4.6e-05 Score=61.88 Aligned_cols=56 Identities=21% Similarity=0.318 Sum_probs=45.1
Q ss_pred CCCeEEEecCCc---cHHHHHHHHHCCCCeEEEeec-hHHHhhccc-C----CCCeEEEEccCCC
Q 046346 143 GLNSLVDVGGGT---GTAAKAIAKAFPKLECTCFDL-PHVVNGLES-D----LVNLKYVGGDMFK 198 (209)
Q Consensus 143 ~~~~vlDvGgG~---G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-~----~~ri~~~~gD~~~ 198 (209)
+..++||||||+ |.....+.+..|+.+++.+|. |.|++.|+. + ..+++|+.+|+.+
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~ 142 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLD 142 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccC
Confidence 668999999997 344444455689999999999 899999886 1 2479999999977
No 243
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=97.87 E-value=1.3e-05 Score=67.53 Aligned_cols=66 Identities=20% Similarity=0.193 Sum_probs=53.8
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-C--------C----CCeEEEEccCCCCC------C
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-D--------L----VNLKYVGGDMFKAI------S 201 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-~--------~----~ri~~~~gD~~~~~------p 201 (209)
+.+.+|||||||+|..+.++++..| .+++++|+ |.+++.|++ . . +|++++.+|.++-+ +
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 4679999999999999999998766 78999999 888988875 1 1 28999999988621 2
Q ss_pred C-CcEEEe
Q 046346 202 P-ADAVVL 208 (209)
Q Consensus 202 ~-~D~~~l 208 (209)
. +|+|++
T Consensus 266 ~~fDvII~ 273 (364)
T 2qfm_A 266 REFDYVIN 273 (364)
T ss_dssp CCEEEEEE
T ss_pred CCceEEEE
Confidence 3 999975
No 244
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=97.86 E-value=9.9e-06 Score=65.74 Aligned_cols=41 Identities=17% Similarity=0.175 Sum_probs=31.2
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES 184 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~ 184 (209)
...+|||||||+|.+ ..++.+.+..+++++|+ +.+++.|++
T Consensus 71 ~~~~vLDiGcG~G~~-~~l~~~~~~~~v~gvD~s~~~l~~a~~ 112 (289)
T 2g72_A 71 SGRTLIDIGSGPTVY-QLLSACSHFEDITMTDFLEVNRQELGR 112 (289)
T ss_dssp CCSEEEEETCTTCCG-GGTTGGGGCSEEEEECSCHHHHHHHHH
T ss_pred CCCeEEEECCCcChH-HHHhhccCCCeEEEeCCCHHHHHHHHH
Confidence 467999999999994 44444445669999999 778876653
No 245
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=97.85 E-value=9.3e-06 Score=69.09 Aligned_cols=66 Identities=17% Similarity=0.075 Sum_probs=52.0
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCC-CeEEEEccCCCCC------C-CCcEE
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLV-NLKYVGGDMFKAI------S-PADAV 206 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~-ri~~~~gD~~~~~------p-~~D~~ 206 (209)
.+..+|||+|||+|.++..+++.. ..+++.+|+ +.+++.|++ ..+ +++|+.+|+++.+ . .+|+|
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~I 289 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDII 289 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEE
Confidence 346799999999999999999863 237999999 788887764 233 8999999987622 2 38999
Q ss_pred Ee
Q 046346 207 VL 208 (209)
Q Consensus 207 ~l 208 (209)
++
T Consensus 290 i~ 291 (385)
T 2b78_A 290 II 291 (385)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 246
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.83 E-value=1.9e-05 Score=67.44 Aligned_cols=62 Identities=19% Similarity=0.277 Sum_probs=47.6
Q ss_pred CCCeEEEecCC------ccHHHHHHHHH-CCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCC-CCC-------C-CcE
Q 046346 143 GLNSLVDVGGG------TGTAAKAIAKA-FPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFK-AIS-------P-ADA 205 (209)
Q Consensus 143 ~~~~vlDvGgG------~G~~~~~l~~~-~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~-~~p-------~-~D~ 205 (209)
+..+||||||| +|..+..++++ +|+.+++++|+ +.+. . ..++|+|+.+|+.+ +++ . +|+
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---~-~~~rI~fv~GDa~dlpf~~~l~~~d~sFDl 291 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---V-DELRIRTIQGDQNDAEFLDRIARRYGPFDI 291 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---G-CBTTEEEEECCTTCHHHHHHHHHHHCCEEE
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---h-cCCCcEEEEecccccchhhhhhcccCCccE
Confidence 46899999999 66666666665 69999999999 4542 1 35799999999987 333 3 899
Q ss_pred EEe
Q 046346 206 VVL 208 (209)
Q Consensus 206 ~~l 208 (209)
|+.
T Consensus 292 Vis 294 (419)
T 3sso_A 292 VID 294 (419)
T ss_dssp EEE
T ss_pred EEE
Confidence 874
No 247
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=97.83 E-value=1.8e-05 Score=66.11 Aligned_cols=66 Identities=12% Similarity=0.140 Sum_probs=53.7
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCC-----CeEEEeec-hHHHhhccc----CCCCeEEEEccCCCCCC-C-CcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPK-----LECTCFDL-PHVVNGLES----DLVNLKYVGGDMFKAIS-P-ADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~-----l~~~~~Dl-p~v~~~a~~----~~~ri~~~~gD~~~~~p-~-~D~~~l 208 (209)
...+|+|+|||+|.++..++++.|. .+++++|+ |.+++.|+. ...++++..+|++++.+ . +|+|+.
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~~~~~fD~Ii~ 207 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVIS 207 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCCCCCCEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCccccCCccEEEE
Confidence 4579999999999999999999875 67899999 777777764 12378999999998654 3 898874
No 248
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.83 E-value=1.6e-05 Score=65.63 Aligned_cols=65 Identities=17% Similarity=0.159 Sum_probs=47.3
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-----hHHHhhcc-cC--CCCeEEEEc-cCCCCCC-CCcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-----PHVVNGLE-SD--LVNLKYVGG-DMFKAIS-PADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-----p~v~~~a~-~~--~~ri~~~~g-D~~~~~p-~~D~~~l 208 (209)
+.+..+|||||||+|.++..++++ -+++.+|+ +..++..+ +. .++|+++.+ |+++.-+ .+|+|+.
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~~~~fD~V~s 154 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIPPERCDTLLC 154 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSCCCCCSEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCCcCCCCEEEE
Confidence 445689999999999999999988 36888998 43333222 11 267999999 9976323 3899874
No 249
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=97.79 E-value=2.7e-05 Score=64.03 Aligned_cols=64 Identities=6% Similarity=-0.002 Sum_probs=46.4
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----CCC-------CeEEEEccCCC---------CCC
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----DLV-------NLKYVGGDMFK---------AIS 201 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~~~-------ri~~~~gD~~~---------~~p 201 (209)
...+|||||||+|..+..+++.. ..+++++|+ +.+++.|++ ... +++|...|+.. ++|
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 46899999999998777766643 458999999 788988875 121 26788887721 234
Q ss_pred --CCcEEE
Q 046346 202 --PADAVV 207 (209)
Q Consensus 202 --~~D~~~ 207 (209)
.+|+|+
T Consensus 127 ~~~FD~V~ 134 (302)
T 2vdw_A 127 FGKFNIID 134 (302)
T ss_dssp SSCEEEEE
T ss_pred CCCeeEEE
Confidence 289986
No 250
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.78 E-value=7.9e-05 Score=60.54 Aligned_cols=75 Identities=17% Similarity=0.147 Sum_probs=59.3
Q ss_pred HHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccCC-CCeEEEEccCCC------CC-
Q 046346 130 TSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESDL-VNLKYVGGDMFK------AI- 200 (209)
Q Consensus 130 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~-~ri~~~~gD~~~------~~- 200 (209)
...+++.+. ..+...+||.+||.|..+..|+++ +.+++++|. |.+++.|+++. +|++++.+||-+ ..
T Consensus 11 l~e~le~L~--~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~~L~~~g 86 (285)
T 1wg8_A 11 YQEALDLLA--VRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAALG 86 (285)
T ss_dssp HHHHHHHHT--CCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTT
T ss_pred HHHHHHhhC--CCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHHHHHHcC
Confidence 455666666 556789999999999999999998 779999999 78888776522 699999999975 11
Q ss_pred -CCCcEEEe
Q 046346 201 -SPADAVVL 208 (209)
Q Consensus 201 -p~~D~~~l 208 (209)
..+|.+++
T Consensus 87 ~~~vDgIL~ 95 (285)
T 1wg8_A 87 VERVDGILA 95 (285)
T ss_dssp CSCEEEEEE
T ss_pred CCCcCEEEe
Confidence 23787775
No 251
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=97.76 E-value=7.7e-06 Score=65.68 Aligned_cols=40 Identities=23% Similarity=0.170 Sum_probs=30.1
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcc
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLE 183 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~ 183 (209)
+..+|||||||+|.++..+++..- .+++++|+ +.+++.|+
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~~-~~v~g~D~s~~~l~~a~ 95 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDSF-QDITLSDFTDRNREELE 95 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhhh-cceeeccccHHHHHHHH
Confidence 457999999999988776554432 26899999 67777665
No 252
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=97.74 E-value=6.7e-05 Score=64.61 Aligned_cols=68 Identities=13% Similarity=0.153 Sum_probs=54.4
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----CCCCeEEEEccCCCC---CC-C-CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----DLVNLKYVGGDMFKA---IS-P-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~~~ri~~~~gD~~~~---~p-~-~D~~~l 208 (209)
..+..+|||+|||+|..+..+++..|+.+++++|+ +..++.+++ ..-+++++.+|+.+. ++ . +|+|++
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~ 321 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILL 321 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEE
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEE
Confidence 34567999999999999999999999989999999 566666553 234689999999873 33 3 899985
No 253
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=97.72 E-value=1.6e-05 Score=67.69 Aligned_cols=65 Identities=26% Similarity=0.240 Sum_probs=52.3
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CCCCeEEEEccCCCCC------C-CCcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFKAI------S-PADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~~~------p-~~D~~~l 208 (209)
+..+|||+|||+|.++..+++. +..+++++|+ +.+++.|++ ..++++++.+|+++.+ + .+|++++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 5689999999999999999987 4558999999 788887764 2238999999987621 2 3899986
No 254
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=97.69 E-value=1.6e-05 Score=67.69 Aligned_cols=66 Identities=17% Similarity=0.143 Sum_probs=52.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------C-CCCeEEEEccCCCCC------C-CCcEE
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------D-LVNLKYVGGDMFKAI------S-PADAV 206 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~-~~ri~~~~gD~~~~~------p-~~D~~ 206 (209)
.+..+|||+|||+|.++..+++.. ..+++.+|+ +.+++.|++ . .++++++.+|+++-+ + .+|++
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~I 297 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEE
Confidence 356799999999999999999975 458999999 788887764 2 238999999988622 2 38998
Q ss_pred Ee
Q 046346 207 VL 208 (209)
Q Consensus 207 ~l 208 (209)
++
T Consensus 298 i~ 299 (396)
T 3c0k_A 298 VM 299 (396)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 255
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.69 E-value=6.7e-05 Score=55.03 Aligned_cols=55 Identities=22% Similarity=0.208 Sum_probs=42.4
Q ss_pred cCCCeEEEecCCcc-HHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCCCCC----CCcEEE
Q 046346 142 EGLNSLVDVGGGTG-TAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFKAIS----PADAVV 207 (209)
Q Consensus 142 ~~~~~vlDvGgG~G-~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~~~p----~~D~~~ 207 (209)
....++||||||+| ..+..|++. -+..+++.|+ |..++ ++..|+|++.. .+|+|+
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~-~g~~V~atDInp~Av~----------~v~dDiF~P~~~~Y~~~DLIY 94 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKH-SKVDLVLTDIKPSHGG----------IVRDDITSPRMEIYRGAALIY 94 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHH-SCCEEEEECSSCSSTT----------EECCCSSSCCHHHHTTEEEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHh-CCCeEEEEECCccccc----------eEEccCCCCcccccCCcCEEE
Confidence 44679999999999 588888874 3577899997 44433 88999999765 488884
No 256
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.69 E-value=3.7e-05 Score=61.90 Aligned_cols=74 Identities=19% Similarity=0.253 Sum_probs=53.3
Q ss_pred HHHHHhccccccCC--CeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHH-------Hhhccc-------CCCCeEEEE
Q 046346 131 SVMIQKCKNVFEGL--NSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHV-------VNGLES-------DLVNLKYVG 193 (209)
Q Consensus 131 ~~~~~~~~~~~~~~--~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v-------~~~a~~-------~~~ri~~~~ 193 (209)
..+.+.+. ..+. .+|||+|||+|..+..++++ ..+++.+|+ |.+ ++.++. ...|++++.
T Consensus 76 e~l~~al~--l~~g~~~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~ 151 (258)
T 2oyr_A 76 EAVAKAVG--IKGDYLPDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIH 151 (258)
T ss_dssp SHHHHHTT--CBTTBCCCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEE
T ss_pred HHHHHHhc--ccCCCCCEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEE
Confidence 44555554 4445 79999999999999999998 457999999 433 333321 115899999
Q ss_pred ccCCC---CCCC-CcEEEe
Q 046346 194 GDMFK---AISP-ADAVVL 208 (209)
Q Consensus 194 gD~~~---~~p~-~D~~~l 208 (209)
+|..+ .++. +|+|++
T Consensus 152 ~D~~~~L~~~~~~fDvV~l 170 (258)
T 2oyr_A 152 ASSLTALTDITPRPQVVYL 170 (258)
T ss_dssp SCHHHHSTTCSSCCSEEEE
T ss_pred CCHHHHHHhCcccCCEEEE
Confidence 99765 3444 899986
No 257
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.68 E-value=2.7e-05 Score=66.67 Aligned_cols=64 Identities=16% Similarity=0.162 Sum_probs=51.7
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----C--C-CCeEEEEccCCCC---CC--CCcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----D--L-VNLKYVGGDMFKA---IS--PADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~--~-~ri~~~~gD~~~~---~p--~~D~~~l 208 (209)
...+|||+|||+|..+..+++.. .+++.+|+ +.+++.|+. . . ++++++.+|+++- .+ .+|+|++
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g--~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKA--SQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCCEEEEeCCCchHHHHHHHhcC--CEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEE
Confidence 36899999999999999998874 68999999 778877764 2 2 5899999999873 22 3899986
No 258
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.68 E-value=4.9e-05 Score=68.44 Aligned_cols=95 Identities=16% Similarity=0.166 Sum_probs=63.2
Q ss_pred cccCCCcHHHHHHHHHHHhhhHhhHHHHHHhcccc--ccCCCeEEEecCCccHHHHHHHHHC----CCCeEEEeechHHH
Q 046346 106 EYDGDEPKLNNFFNEAMASDARLATSVMIQKCKNV--FEGLNSLVDVGGGTGTAAKAIAKAF----PKLECTCFDLPHVV 179 (209)
Q Consensus 106 ~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~--~~~~~~vlDvGgG~G~~~~~l~~~~----P~l~~~~~Dlp~v~ 179 (209)
|.+++++-+-..|.+|+.. .+....... ..+...|+|||||+|-++...+++. -++++..++-.++.
T Consensus 325 evFEkD~vKy~~Ye~AI~~-------Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A 397 (637)
T 4gqb_A 325 EVFEKDPIKYSQYQQAIYK-------CLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNA 397 (637)
T ss_dssp HHHTTCHHHHHHHHHHHHH-------HHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHH
T ss_pred hhhcCChhhHHHHHHHHHH-------HHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHH
Confidence 4457777777777777642 122222111 1234689999999999954433332 23467888876666
Q ss_pred hhccc------CCCCeEEEEccCCC-CCCC-CcEEE
Q 046346 180 NGLES------DLVNLKYVGGDMFK-AISP-ADAVV 207 (209)
Q Consensus 180 ~~a~~------~~~ri~~~~gD~~~-~~p~-~D~~~ 207 (209)
..+++ ..++|+++.||+.+ .+|. +|+++
T Consensus 398 ~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIV 433 (637)
T 4gqb_A 398 VVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIV 433 (637)
T ss_dssp HHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEE
T ss_pred HHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEE
Confidence 55553 57899999999988 7887 99986
No 259
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.65 E-value=9.4e-05 Score=67.62 Aligned_cols=75 Identities=15% Similarity=0.079 Sum_probs=57.0
Q ss_pred HHHHhccccccCCCeEEEecCCccHHHHHHHHH------------------------------------------CCCCe
Q 046346 132 VMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKA------------------------------------------FPKLE 169 (209)
Q Consensus 132 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~------------------------------------------~P~l~ 169 (209)
.++.... |.+...|+|.+||+|.++++.+.. .|+.+
T Consensus 181 ~ll~~~~--~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~ 258 (703)
T 3v97_A 181 AIVMRSG--WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSH 258 (703)
T ss_dssp HHHHHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHhhC--CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCcc
Confidence 3444444 566789999999999999988765 24568
Q ss_pred EEEeec-hHHHhhccc------CCCCeEEEEccCCC-CCC----CCcEEEe
Q 046346 170 CTCFDL-PHVVNGLES------DLVNLKYVGGDMFK-AIS----PADAVVL 208 (209)
Q Consensus 170 ~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~-~~p----~~D~~~l 208 (209)
++++|+ |.+++.|+. ..++|+|..+|+++ ..| .+|+++.
T Consensus 259 i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~ 309 (703)
T 3v97_A 259 FYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLS 309 (703)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEe
Confidence 999999 888888774 35679999999987 223 4788874
No 260
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.63 E-value=5.5e-05 Score=63.88 Aligned_cols=53 Identities=15% Similarity=0.197 Sum_probs=43.6
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCC
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFK 198 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~ 198 (209)
..+|||+|||+|.++..+++.. .+++.+|. +.+++.|++ ..++++|+.+|.++
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~--~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~ 272 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNF--DRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEE 272 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGS--SEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHH
T ss_pred CCEEEEccCCCCHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHH
Confidence 3689999999999999998854 47899999 788887764 23589999999865
No 261
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=97.62 E-value=8.2e-05 Score=65.05 Aligned_cols=66 Identities=17% Similarity=0.203 Sum_probs=53.7
Q ss_pred CCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCC-C--CCC-CcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFP-KLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFK-A--ISP-ADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P-~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~-~--~p~-~D~~~l 208 (209)
...+|||+|||+|..+..+++..+ ..+++.+|+ +..++.+++ ...+|+++.+|+.+ + .+. +|+|++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~ 193 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILL 193 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEE
Confidence 568999999999999999999976 578999999 677776654 23579999999976 2 444 999986
No 262
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=97.61 E-value=2.8e-05 Score=67.72 Aligned_cols=67 Identities=15% Similarity=0.079 Sum_probs=53.3
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCC-CeEEEeec-hHHHhhccc-----CCCCeEEEEccCCC-C--CCC-CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPK-LECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFK-A--ISP-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~-l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~-~--~p~-~D~~~l 208 (209)
.....+|||+|||+|..+..+++..++ .+++.+|+ +..++.+++ ... |+++.+|+.+ + .+. +|+|++
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~~FD~Il~ 176 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGTYFHRVLL 176 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCSCEEEEEE
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccccCCEEEE
Confidence 445689999999999999999999876 68999999 677776664 123 9999999765 2 344 899985
No 263
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.61 E-value=0.00012 Score=59.92 Aligned_cols=74 Identities=7% Similarity=0.023 Sum_probs=48.4
Q ss_pred HHHHhcccccc-CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEE-ccCC--C--CCCC--
Q 046346 132 VMIQKCKNVFE-GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVG-GDMF--K--AISP-- 202 (209)
Q Consensus 132 ~~~~~~~~~~~-~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~-gD~~--~--~~p~-- 202 (209)
.+++.+. .. ...++||||||||.++..++++ +..+++.+|+ +.+++.+.+...|+..+. .|+. . .+|.
T Consensus 75 ~~l~~~~--~~~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~ 151 (291)
T 3hp7_A 75 KALAVFN--LSVEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGL 151 (291)
T ss_dssp HHHHHTT--CCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCC
T ss_pred HHHHhcC--CCccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCC
Confidence 3455554 33 4579999999999999999887 5568999999 677766433445654443 2332 1 2342
Q ss_pred CcEEEe
Q 046346 203 ADAVVL 208 (209)
Q Consensus 203 ~D~~~l 208 (209)
+|+++.
T Consensus 152 fD~v~~ 157 (291)
T 3hp7_A 152 PSFASI 157 (291)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 677653
No 264
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=97.57 E-value=3.1e-05 Score=65.69 Aligned_cols=64 Identities=23% Similarity=0.210 Sum_probs=51.7
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCCCC------CC-CcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFKAI------SP-ADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~~~------p~-~D~~~l 208 (209)
...+|||+|||+|.++..+++. ..+++++|+ +.+++.|++ ...+++++.+|+++.+ +. +|++++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~ 285 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVL 285 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEE
Confidence 5679999999999999999998 567899999 788887764 1244999999987621 33 899886
No 265
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=97.56 E-value=7.7e-05 Score=63.62 Aligned_cols=64 Identities=16% Similarity=0.079 Sum_probs=48.6
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----CCCCeEEEEccCCCC---CCC-CcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----DLVNLKYVGGDMFKA---ISP-ADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~~~ri~~~~gD~~~~---~p~-~D~~~l 208 (209)
+..+|||+|||+|.++..+++... +++.+|+ +.+++.|++ ..-..++..+|.++. .+. +|+|++
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga--~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~ 286 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGA--YALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLL 286 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEE
T ss_pred CCCeEEEcccchhHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEE
Confidence 468999999999999999999854 4999999 788887764 111235668998862 233 899986
No 266
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=97.55 E-value=0.00013 Score=59.31 Aligned_cols=66 Identities=14% Similarity=0.235 Sum_probs=44.3
Q ss_pred CCCeEEEecCCccHHHH----HHHHHCCCCeE--EEeec-hHHHhhcccC------CCCeEE--EEccCCC-C------C
Q 046346 143 GLNSLVDVGGGTGTAAK----AIAKAFPKLEC--TCFDL-PHVVNGLESD------LVNLKY--VGGDMFK-A------I 200 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~----~l~~~~P~l~~--~~~Dl-p~v~~~a~~~------~~ri~~--~~gD~~~-~------~ 200 (209)
+..+|||||||+|.++. .++.++|+.++ +++|. +++++.|++. ..++++ ..++..+ + +
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 35699999999997654 55667898854 99998 7888877641 134444 4555432 1 2
Q ss_pred C-C-CcEEEe
Q 046346 201 S-P-ADAVVL 208 (209)
Q Consensus 201 p-~-~D~~~l 208 (209)
+ . +|+|+.
T Consensus 132 ~~~~fD~V~~ 141 (292)
T 2aot_A 132 ELQKWDFIHM 141 (292)
T ss_dssp CCCCEEEEEE
T ss_pred CCCceeEEEE
Confidence 2 3 899875
No 267
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.55 E-value=9.5e-05 Score=67.61 Aligned_cols=65 Identities=12% Similarity=0.050 Sum_probs=51.8
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------CC-CCeEEEEccCCCC---CCC-CcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------DL-VNLKYVGGDMFKA---ISP-ADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~~-~ri~~~~gD~~~~---~p~-~D~~~l 208 (209)
...+|||+|||+|.++..+++... .+++.+|+ +.+++.|++ .. ++++++.+|.++- ... +|+|++
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga-~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~ 615 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGA-RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFI 615 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEE
Confidence 457999999999999999998543 46999999 788887764 23 5899999999872 233 999986
No 268
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.54 E-value=0.00014 Score=60.03 Aligned_cols=68 Identities=12% Similarity=0.173 Sum_probs=53.3
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCCC---C---CCCcEEE
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAF-PKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFKA---I---SPADAVV 207 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~-P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~~---~---p~~D~~~ 207 (209)
.....+|||+|||+|..+..+++.. +..+++.+|+ +..++.+++ ...+|+++.+|+.+- . ..+|.|+
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl 179 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYIL 179 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEE
Confidence 4456899999999999999999985 5678999999 677776654 235799999998762 1 2379988
Q ss_pred e
Q 046346 208 L 208 (209)
Q Consensus 208 l 208 (209)
+
T Consensus 180 ~ 180 (309)
T 2b9e_A 180 L 180 (309)
T ss_dssp E
T ss_pred E
Confidence 6
No 269
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=97.52 E-value=3.9e-05 Score=66.69 Aligned_cols=68 Identities=13% Similarity=0.107 Sum_probs=53.6
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCC-CeEEEeec-hHHHhhccc-----CCCCeEEEEccCCC--C-CCC-CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPK-LECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFK--A-ISP-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~-l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~--~-~p~-~D~~~l 208 (209)
.....+|||+|||+|..+..+++..++ .+++.+|+ +..++.+++ ...+|.++.+|..+ + .+. +|+|++
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~ 181 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVV 181 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEE
Confidence 445689999999999999999998765 68999999 667766654 23579999999865 1 344 899975
No 270
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=97.50 E-value=0.00015 Score=62.74 Aligned_cols=66 Identities=18% Similarity=0.024 Sum_probs=51.1
Q ss_pred CCCeEEEecCCccHHHHHHHHHC-------------CCCeEEEeec-hHHHhhccc------CC-CCeEEEEccCCCC-C
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAF-------------PKLECTCFDL-PHVVNGLES------DL-VNLKYVGGDMFKA-I 200 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~-------------P~l~~~~~Dl-p~v~~~a~~------~~-~ri~~~~gD~~~~-~ 200 (209)
...+|+|.|||+|.++..+++.. +..+++++|+ |.++..|+. .. .++++..+|++.. .
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~ 250 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEP 250 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCC
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCcc
Confidence 45799999999999999998864 5577999999 777777663 11 1678899999883 3
Q ss_pred C-CCcEEEe
Q 046346 201 S-PADAVVL 208 (209)
Q Consensus 201 p-~~D~~~l 208 (209)
. .+|+|+.
T Consensus 251 ~~~fD~Iv~ 259 (445)
T 2okc_A 251 STLVDVILA 259 (445)
T ss_dssp SSCEEEEEE
T ss_pred cCCcCEEEE
Confidence 3 3899874
No 271
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.48 E-value=0.00012 Score=62.06 Aligned_cols=66 Identities=14% Similarity=0.038 Sum_probs=52.6
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc----C---------------C-CCeEEEEccCCC---
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES----D---------------L-VNLKYVGGDMFK--- 198 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~----~---------------~-~ri~~~~gD~~~--- 198 (209)
...+|||+|||+|..++.++++.|..+++..|+ +..++.+++ . . .+++++.+|..+
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 367999999999999999999999889999999 677776653 2 2 238999999865
Q ss_pred CCCC-CcEEEe
Q 046346 199 AISP-ADAVVL 208 (209)
Q Consensus 199 ~~p~-~D~~~l 208 (209)
..+. +|+|++
T Consensus 127 ~~~~~fD~I~l 137 (378)
T 2dul_A 127 ERHRYFHFIDL 137 (378)
T ss_dssp HSTTCEEEEEE
T ss_pred hccCCCCEEEe
Confidence 2333 898875
No 272
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=97.45 E-value=0.00015 Score=61.84 Aligned_cols=52 Identities=13% Similarity=0.100 Sum_probs=41.7
Q ss_pred hHHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc
Q 046346 129 ATSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES 184 (209)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~ 184 (209)
....+++.+. .....+|||||||+|.++..++++. .+++++|. +.+++.|++
T Consensus 95 ~~~~l~~~~~--~~~~~~VLDiGcG~G~~~~~l~~~g--~~v~gvD~s~~~~~~a~~ 147 (416)
T 4e2x_A 95 LARDFLATEL--TGPDPFIVEIGCNDGIMLRTIQEAG--VRHLGFEPSSGVAAKARE 147 (416)
T ss_dssp HHHHHHHTTT--CSSSCEEEEETCTTTTTHHHHHHTT--CEEEEECCCHHHHHHHHT
T ss_pred HHHHHHHHhC--CCCCCEEEEecCCCCHHHHHHHHcC--CcEEEECCCHHHHHHHHH
Confidence 3455666665 5567899999999999999999974 48999999 678888874
No 273
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.32 E-value=0.00047 Score=58.12 Aligned_cols=64 Identities=19% Similarity=0.146 Sum_probs=49.8
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhcccCCCCeEEEEccCCCCCC-C--CcEEE
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLESDLVNLKYVGGDMFKAIS-P--ADAVV 207 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~~~~ri~~~~gD~~~~~p-~--~D~~~ 207 (209)
+.+..++||+|+++|.++..++++ +.+++.+|..++-.... ..++|+++.+|.|+-.| . +|+++
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~~~l~-~~~~V~~~~~d~~~~~~~~~~~D~vv 275 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMAQSLM-DTGQVTWLREDGFKFRPTRSNISWMV 275 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCCHHHH-TTTCEEEECSCTTTCCCCSSCEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcChhhc-cCCCeEEEeCccccccCCCCCcCEEE
Confidence 456789999999999999999998 67899999744333222 46899999999998433 2 78775
No 274
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.26 E-value=0.00026 Score=60.36 Aligned_cols=66 Identities=12% Similarity=-0.032 Sum_probs=53.0
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCC-CeEEEeec-hHHHhhccc------CCCC-eEEEEccCCC----CCCC-CcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPK-LECTCFDL-PHVVNGLES------DLVN-LKYVGGDMFK----AISP-ADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~-l~~~~~Dl-p~v~~~a~~------~~~r-i~~~~gD~~~----~~p~-~D~~~l 208 (209)
+..+|||++||+|.+++.++++.++ .+++.+|+ |..++.+++ ..++ ++++.+|.++ .++. +|+|++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 4679999999999999999998776 47899999 777777664 3455 9999999865 2333 899986
No 275
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.13 E-value=0.00046 Score=56.42 Aligned_cols=59 Identities=17% Similarity=0.158 Sum_probs=44.5
Q ss_pred ccCCCeEEEecC------CccHHHHHHHHHCC-CCeEEEeechHHHhhcccCCCCeEE-EEccCCC-CCCC-CcEEEe
Q 046346 141 FEGLNSLVDVGG------GTGTAAKAIAKAFP-KLECTCFDLPHVVNGLESDLVNLKY-VGGDMFK-AISP-ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGg------G~G~~~~~l~~~~P-~l~~~~~Dlp~v~~~a~~~~~ri~~-~~gD~~~-~~p~-~D~~~l 208 (209)
+.+..+|||||| |+|. ..++++.| +.+++++|+.+.+ .++++ +.+|+.+ +.+. +|+|+.
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~v-------~~v~~~i~gD~~~~~~~~~fD~Vvs 129 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFV-------SDADSTLIGDCATVHTANKWDLIIS 129 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCB-------CSSSEEEESCGGGCCCSSCEEEEEE
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCCC-------CCCEEEEECccccCCccCcccEEEE
Confidence 456789999999 5577 45567777 6899999995441 47889 9999987 4444 899874
No 276
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=96.95 E-value=0.0024 Score=53.10 Aligned_cols=77 Identities=12% Similarity=0.127 Sum_probs=61.1
Q ss_pred HHHHHHhccccccCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHHhhcccC-CCCeEEEEccCCC--------
Q 046346 130 TSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAF-PKLECTCFDL-PHVVNGLESD-LVNLKYVGGDMFK-------- 198 (209)
Q Consensus 130 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-P~l~~~~~Dl-p~v~~~a~~~-~~ri~~~~gD~~~-------- 198 (209)
...+++.+. ..+...+||..+|.|..+..|+++. |+.+++++|+ |.+++.|+.+ .+|++++.++|-+
T Consensus 46 l~Evl~~L~--i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~l~~~L~~~ 123 (347)
T 3tka_A 46 LDEAVNGLN--IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAER 123 (347)
T ss_dssp THHHHHHTC--CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGGHHHHHHHT
T ss_pred HHHHHHhhC--CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHHhc
Confidence 456667666 5567899999999999999999995 8899999999 7888887543 5799999999875
Q ss_pred CCC-CCcEEEe
Q 046346 199 AIS-PADAVVL 208 (209)
Q Consensus 199 ~~p-~~D~~~l 208 (209)
.++ ..|.+++
T Consensus 124 g~~~~vDgILf 134 (347)
T 3tka_A 124 DLIGKIDGILL 134 (347)
T ss_dssp TCTTCEEEEEE
T ss_pred CCCCcccEEEE
Confidence 123 2677765
No 277
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.83 E-value=0.0011 Score=56.04 Aligned_cols=65 Identities=18% Similarity=0.157 Sum_probs=51.2
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-C------------CCCeEEEEccCCCC-------CC
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-D------------LVNLKYVGGDMFKA-------IS 201 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-~------------~~ri~~~~gD~~~~-------~p 201 (209)
++++||-||||.|..++++++ ||.-+++++|+ |.|++.+++ + .+|++.+.+|.++- -.
T Consensus 205 ~pkrVLIIGgGdG~~~revlk-h~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVK-LKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHT-TCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCeEEEECCCcHHHHHHHHh-cCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 468999999999999999997 56678999999 889988875 1 25789999997641 12
Q ss_pred CCcEEEe
Q 046346 202 PADAVVL 208 (209)
Q Consensus 202 ~~D~~~l 208 (209)
.+|+|++
T Consensus 284 ~yDvIIv 290 (381)
T 3c6k_A 284 EFDYVIN 290 (381)
T ss_dssp CEEEEEE
T ss_pred ceeEEEE
Confidence 3888874
No 278
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=96.77 E-value=0.0012 Score=59.97 Aligned_cols=65 Identities=18% Similarity=0.168 Sum_probs=44.7
Q ss_pred CCCeEEEecCCccHHHHHHHHH----C---------CCCeEEEeechH-HHhhcc-----cCCCCeEEEEccCCC-CC--
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKA----F---------PKLECTCFDLPH-VVNGLE-----SDLVNLKYVGGDMFK-AI-- 200 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~----~---------P~l~~~~~Dlp~-v~~~a~-----~~~~ri~~~~gD~~~-~~-- 200 (209)
+...|+|||||+|.++...+++ . ...+++.+|-.. ++...+ ...++|+++.+|..+ .+
T Consensus 409 ~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 409 KTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp SEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHH
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhccccc
Confidence 3578999999999997543222 2 234788888843 222211 257899999999987 55
Q ss_pred ----CC-CcEEE
Q 046346 201 ----SP-ADAVV 207 (209)
Q Consensus 201 ----p~-~D~~~ 207 (209)
|. +|+++
T Consensus 489 ~~~~~ekVDIIV 500 (745)
T 3ua3_A 489 KDRGFEQPDIIV 500 (745)
T ss_dssp HHTTCCCCSEEE
T ss_pred ccCCCCcccEEE
Confidence 55 99986
No 279
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.69 E-value=0.003 Score=49.95 Aligned_cols=76 Identities=14% Similarity=0.153 Sum_probs=52.6
Q ss_pred HHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhh----ccc-CCCCeEEEEc-cCCCCCCC-
Q 046346 130 TSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNG----LES-DLVNLKYVGG-DMFKAISP- 202 (209)
Q Consensus 130 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~----a~~-~~~ri~~~~g-D~~~~~p~- 202 (209)
..++.+.+. +....+|||+||++|.++.-++....-.+++.+|+-..-.. .+. ...-|+|..+ |++.--|.
T Consensus 67 L~ei~ek~~--l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~~~ 144 (267)
T 3p8z_A 67 LQWFVERNM--VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPPEK 144 (267)
T ss_dssp HHHHHHTTS--SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCCCC
T ss_pred HHHHHHhcC--CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecCCcc
Confidence 345555553 55667999999999999998887776668999998322111 111 2467999999 97652223
Q ss_pred CcEEE
Q 046346 203 ADAVV 207 (209)
Q Consensus 203 ~D~~~ 207 (209)
+|.++
T Consensus 145 ~Dtll 149 (267)
T 3p8z_A 145 CDTLL 149 (267)
T ss_dssp CSEEE
T ss_pred ccEEE
Confidence 88876
No 280
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=96.34 E-value=0.0061 Score=54.00 Aligned_cols=66 Identities=14% Similarity=0.061 Sum_probs=48.8
Q ss_pred CCCeEEEecCCccHHHHHHHHHCC------------------CCeEEEeec-hHHHhhccc-----CCC-----CeEEEE
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFP------------------KLECTCFDL-PHVVNGLES-----DLV-----NLKYVG 193 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P------------------~l~~~~~Dl-p~v~~~a~~-----~~~-----ri~~~~ 193 (209)
...+|+|.+||+|.++..+.+... ..+++++|+ |.++..|+. ... ++.+..
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRL 248 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEe
Confidence 457999999999999998887632 246899999 677777663 112 278899
Q ss_pred ccCCCC----CCCCcEEEe
Q 046346 194 GDMFKA----ISPADAVVL 208 (209)
Q Consensus 194 gD~~~~----~p~~D~~~l 208 (209)
+|.+.. .+.+|+|+.
T Consensus 249 gDtL~~~~~~~~~fD~Vv~ 267 (541)
T 2ar0_A 249 GNTLGSDGENLPKAHIVAT 267 (541)
T ss_dssp SCTTSHHHHTSCCEEEEEE
T ss_pred CCCcccccccccCCeEEEE
Confidence 999872 234899875
No 281
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=96.22 E-value=0.0033 Score=55.72 Aligned_cols=65 Identities=17% Similarity=0.060 Sum_probs=47.5
Q ss_pred CCeEEEecCCccHHHHHHHHHCC---------------CCeEEEeec-hHHHhhccc------CCCCeEEEEccCCC-C-
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAFP---------------KLECTCFDL-PHVVNGLES------DLVNLKYVGGDMFK-A- 199 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~P---------------~l~~~~~Dl-p~v~~~a~~------~~~ri~~~~gD~~~-~- 199 (209)
..+|+|.+||+|.++.++++..+ ..++.++|+ |.++..|+. ...++.+..+|.+. +
T Consensus 245 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~ 324 (544)
T 3khk_A 245 KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQ 324 (544)
T ss_dssp SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCS
T ss_pred CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcc
Confidence 34999999999999998876543 567899999 677777663 23455558899886 3
Q ss_pred CC--CCcEEEe
Q 046346 200 IS--PADAVVL 208 (209)
Q Consensus 200 ~p--~~D~~~l 208 (209)
.+ .+|+|+.
T Consensus 325 ~~~~~fD~Iv~ 335 (544)
T 3khk_A 325 HPDLRADFVMT 335 (544)
T ss_dssp CTTCCEEEEEE
T ss_pred cccccccEEEE
Confidence 23 2899874
No 282
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.15 E-value=0.013 Score=49.06 Aligned_cols=55 Identities=11% Similarity=0.151 Sum_probs=42.3
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc--CCCCeEEEEccCCC
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES--DLVNLKYVGGDMFK 198 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~--~~~ri~~~~gD~~~ 198 (209)
...|||||.|.|.++..|+++...-+.+++++ +..++.-++ ..++++.+.+|+++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~ 116 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYD 116 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTC
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCccc
Confidence 47899999999999999999865556888887 333333322 25789999999975
No 283
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=96.09 E-value=0.011 Score=52.36 Aligned_cols=66 Identities=15% Similarity=0.028 Sum_probs=51.4
Q ss_pred CCCeEEEecCCccHHHHHHHHHC---CCCeEEEeec-hHHHhhccc------CC-CCeEEEEccCCCC-CC-----CCcE
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAF---PKLECTCFDL-PHVVNGLES------DL-VNLKYVGGDMFKA-IS-----PADA 205 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~---P~l~~~~~Dl-p~v~~~a~~------~~-~ri~~~~gD~~~~-~p-----~~D~ 205 (209)
...+|+|.+||+|.++..++++. +..++.++|+ +.+...|+. .. +++.+..+|.+.. +| .+|+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~ 300 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG 300 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSE
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccE
Confidence 45799999999999999999985 4678999999 677776653 11 4688999999873 33 2899
Q ss_pred EEe
Q 046346 206 VVL 208 (209)
Q Consensus 206 ~~l 208 (209)
|+.
T Consensus 301 Iva 303 (542)
T 3lkd_A 301 VLM 303 (542)
T ss_dssp EEE
T ss_pred EEe
Confidence 874
No 284
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=96.01 E-value=0.011 Score=54.64 Aligned_cols=67 Identities=15% Similarity=0.159 Sum_probs=47.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCC---CCeEEEeec-hHHHhhc--cc------C---CCCeEEEEccCCCC----CCC
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFP---KLECTCFDL-PHVVNGL--ES------D---LVNLKYVGGDMFKA----ISP 202 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P---~l~~~~~Dl-p~v~~~a--~~------~---~~ri~~~~gD~~~~----~p~ 202 (209)
....+|+|.|||+|.++.+++++.+ ..+++++|+ |.++..| +. . .....+...|++++ ...
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 3467999999999999999999987 357899999 6677666 21 1 12235566677762 223
Q ss_pred CcEEEe
Q 046346 203 ADAVVL 208 (209)
Q Consensus 203 ~D~~~l 208 (209)
+|+|+.
T Consensus 400 FDVVIg 405 (878)
T 3s1s_A 400 VSVVVM 405 (878)
T ss_dssp EEEEEE
T ss_pred CCEEEE
Confidence 898874
No 285
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=95.99 E-value=0.015 Score=46.90 Aligned_cols=35 Identities=20% Similarity=0.159 Sum_probs=28.3
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL 175 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl 175 (209)
+....+|||+|||+|.++.-++++.+-.+++.+|+
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dV 106 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTL 106 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEE
Confidence 55667999999999999999888877656655665
No 286
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=95.89 E-value=0.0095 Score=47.61 Aligned_cols=74 Identities=18% Similarity=0.188 Sum_probs=44.8
Q ss_pred HHHHHHhccccccCCCeEEEecCCccHHHHHHHHH--CCCCeE--EEeechHHHhhcccCCCCe---EEEEc-cCCCCCC
Q 046346 130 TSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKA--FPKLEC--TCFDLPHVVNGLESDLVNL---KYVGG-DMFKAIS 201 (209)
Q Consensus 130 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~--~P~l~~--~~~Dlp~v~~~a~~~~~ri---~~~~g-D~~~~~p 201 (209)
..++.+.+ .+.+..+|||+||++|.++.-.+++ -...++ +..|+ +...... ....+ .|..| ||++.-|
T Consensus 62 L~EIdeK~--likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~~~P~~~-~~~Gv~~i~~~~G~Df~~~~~ 137 (269)
T 2px2_A 62 LRWLVERR--FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-HEEPMLM-QSYGWNIVTMKSGVDVFYKPS 137 (269)
T ss_dssp HHHHHHTT--SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-SCCCCCC-CSTTGGGEEEECSCCGGGSCC
T ss_pred HHHHHHcC--CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-ccCCCcc-cCCCceEEEeeccCCccCCCC
Confidence 34555553 4677899999999999999999886 222123 34443 1111100 11344 55557 9998444
Q ss_pred C-CcEEE
Q 046346 202 P-ADAVV 207 (209)
Q Consensus 202 ~-~D~~~ 207 (209)
. +|+++
T Consensus 138 ~~~DvVL 144 (269)
T 2px2_A 138 EISDTLL 144 (269)
T ss_dssp CCCSEEE
T ss_pred CCCCEEE
Confidence 3 89886
No 287
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=95.87 E-value=0.0091 Score=48.64 Aligned_cols=77 Identities=16% Similarity=0.154 Sum_probs=50.2
Q ss_pred HHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHh----hcccC-CCCeEEEEc-cCCCCC-CC
Q 046346 130 TSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVN----GLESD-LVNLKYVGG-DMFKAI-SP 202 (209)
Q Consensus 130 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~----~a~~~-~~ri~~~~g-D~~~~~-p~ 202 (209)
..++.+.+. +....+|||+||++|.++.-++....-.+++.+|+-..-. ..+++ ..-|.|+.+ |++.-- ..
T Consensus 83 L~ei~~~~~--l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~~~ 160 (321)
T 3lkz_A 83 LRWLVERRF--LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPSEC 160 (321)
T ss_dssp HHHHHHTTS--CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCCCC
T ss_pred HHHHHHhcC--CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCCCC
Confidence 344555543 5566799999999999999777777666899999832200 01112 234889988 876522 22
Q ss_pred CcEEEe
Q 046346 203 ADAVVL 208 (209)
Q Consensus 203 ~D~~~l 208 (209)
+|+++.
T Consensus 161 ~D~ivc 166 (321)
T 3lkz_A 161 CDTLLC 166 (321)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 787763
No 288
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=95.78 E-value=0.03 Score=47.28 Aligned_cols=64 Identities=23% Similarity=0.303 Sum_probs=43.1
Q ss_pred CCeEEEecCCccHHHHHH--------HHHC-------CCCeEEEeechH-----HHhhcccC-------------C---C
Q 046346 144 LNSLVDVGGGTGTAAKAI--------AKAF-------PKLECTCFDLPH-----VVNGLESD-------------L---V 187 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l--------~~~~-------P~l~~~~~Dlp~-----v~~~a~~~-------------~---~ 187 (209)
.-+|+|+|||+|..+..+ .+++ |++++..-|+|. +....... . -
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 578999999999988876 4454 888999999972 22211110 0 1
Q ss_pred CeEEEEccCCC-CCCC--CcEEE
Q 046346 188 NLKYVGGDMFK-AISP--ADAVV 207 (209)
Q Consensus 188 ri~~~~gD~~~-~~p~--~D~~~ 207 (209)
=+.-++|.|+. -+|. .|+++
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~ 155 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFH 155 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEE
T ss_pred EEEecChhhhcccCCCcceEEEE
Confidence 13457788988 4665 78875
No 289
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=95.66 E-value=0.01 Score=47.92 Aligned_cols=45 Identities=20% Similarity=0.153 Sum_probs=35.1
Q ss_pred hHHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec
Q 046346 129 ATSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL 175 (209)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl 175 (209)
...++.+.+. +....+|||+|||+|.++.-++++.|-.+++.+|+
T Consensus 78 KL~ei~eK~~--Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~Gvdv 122 (282)
T 3gcz_A 78 KLRWMEERGY--VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTL 122 (282)
T ss_dssp HHHHHHHTTS--CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECC
T ss_pred HHHHHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEe
Confidence 3445555553 56677999999999999999998888777777887
No 290
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=95.56 E-value=0.048 Score=41.97 Aligned_cols=54 Identities=15% Similarity=0.204 Sum_probs=38.5
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc------C--CCCeEEEEccCC
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES------D--LVNLKYVGGDMF 197 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~------~--~~ri~~~~gD~~ 197 (209)
..+.++||+||+| .-+..++ +.++-+++-+|. ++..+.|++ . .++|+++.||..
T Consensus 28 l~~a~~VLEiGtG--ySTl~lA-~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~ 90 (202)
T 3cvo_A 28 YEEAEVILEYGSG--GSTVVAA-ELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIG 90 (202)
T ss_dssp HHHCSEEEEESCS--HHHHHHH-TSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCS
T ss_pred hhCCCEEEEECch--HHHHHHH-HcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCch
Confidence 3467899999985 4444444 456788999997 566666653 3 578999999954
No 291
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.27 E-value=0.06 Score=44.68 Aligned_cols=57 Identities=19% Similarity=0.231 Sum_probs=48.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc----C----------------------CCCeEEEEcc
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES----D----------------------LVNLKYVGGD 195 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~----~----------------------~~ri~~~~gD 195 (209)
.+...||.+|||.....-.+...+|+++++=+|+|++++.-++ . .+++.+++.|
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 4578999999999999999999999999999999999865332 1 3789999999
Q ss_pred CCC
Q 046346 196 MFK 198 (209)
Q Consensus 196 ~~~ 198 (209)
+.+
T Consensus 176 L~d 178 (334)
T 1rjd_A 176 LND 178 (334)
T ss_dssp TTC
T ss_pred CCC
Confidence 987
No 292
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=95.25 E-value=0.011 Score=47.36 Aligned_cols=33 Identities=27% Similarity=0.369 Sum_probs=27.5
Q ss_pred CCCeEEEecCCccHHHHHHHHH-------CCC-----CeEEEeec
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKA-------FPK-----LECTCFDL 175 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~-------~P~-----l~~~~~Dl 175 (209)
+..+|||||+|+|..+..+++. +|+ ++++.++.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~ 104 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEK 104 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEES
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEEC
Confidence 4579999999999999887765 784 67888886
No 293
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.20 E-value=0.029 Score=45.58 Aligned_cols=40 Identities=23% Similarity=0.158 Sum_probs=33.7
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES 184 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~ 184 (209)
....|||++||+|..+.++++. +-+++++|+ |..++.|++
T Consensus 235 ~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~~a~~ 275 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQLAKE 275 (297)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHH
Confidence 4679999999999999999887 468999999 677777664
No 294
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=94.59 E-value=0.017 Score=42.74 Aligned_cols=52 Identities=8% Similarity=-0.027 Sum_probs=39.2
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-CCCCeEEEEccCCC-CC---CC--CcEEEe
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-DLVNLKYVGGDMFK-AI---SP--ADAVVL 208 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-~~~ri~~~~gD~~~-~~---p~--~D~~~l 208 (209)
.....+|||||||. +.+|. +.+++.|++ ...++++..+|+.+ +. +. +|+++.
T Consensus 10 ~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~ 69 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILS 69 (176)
T ss_dssp CCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEE
T ss_pred CCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEE
Confidence 45678999999996 23787 788888875 34469999999876 33 43 899875
No 295
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=94.54 E-value=0.07 Score=45.14 Aligned_cols=33 Identities=18% Similarity=0.202 Sum_probs=28.3
Q ss_pred CCeEEEecCCccHHHHHHHHH-----------------CCCCeEEEeech
Q 046346 144 LNSLVDVGGGTGTAAKAIAKA-----------------FPKLECTCFDLP 176 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~-----------------~P~l~~~~~Dlp 176 (209)
.-+|+|+||++|..+..+... .|+++++.-|+|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp 102 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLF 102 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCC
Confidence 678999999999999877766 588889999997
No 296
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=93.46 E-value=0.36 Score=40.79 Aligned_cols=64 Identities=19% Similarity=0.325 Sum_probs=41.7
Q ss_pred cHHHHHHHHHHHhhhHhhHHHHHHhccccccCCCeEEEecCCccHHHHHHHHH---C----CCCeEEEeechHHHhh
Q 046346 112 PKLNNFFNEAMASDARLATSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKA---F----PKLECTCFDLPHVVNG 181 (209)
Q Consensus 112 ~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~---~----P~l~~~~~Dlp~v~~~ 181 (209)
|+....|...+..+-. . +.+... .+..-.||++|.|+|.++..+++. . ..++.++++..+.+..
T Consensus 55 peis~~FGe~la~~~~---~-~w~~~g--~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~ 125 (387)
T 1zkd_A 55 PEISQMFGELLGLWSA---S-VWKAAD--EPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQ 125 (387)
T ss_dssp HHHCHHHHHHHHHHHH---H-HHHHTT--CCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHH
T ss_pred CchHHHHHHHHHHHHH---H-HHHHcC--CCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHH
Confidence 6666677776653221 1 112222 344568999999999999988875 2 3458899998665543
No 297
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=93.27 E-value=0.083 Score=43.00 Aligned_cols=37 Identities=16% Similarity=0.179 Sum_probs=30.9
Q ss_pred cccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeech
Q 046346 140 VFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLP 176 (209)
Q Consensus 140 ~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp 176 (209)
.+.+..+|||+||++|.++.-++++.+-..++++|+.
T Consensus 78 l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg 114 (300)
T 3eld_A 78 YLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLG 114 (300)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCC
T ss_pred CCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEec
Confidence 3567799999999999999999998776667778873
No 298
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=93.20 E-value=0.098 Score=42.35 Aligned_cols=66 Identities=12% Similarity=0.075 Sum_probs=47.2
Q ss_pred CCCeEEEecCCccHHHHHHHHHC-----CCCeEEEeec----hH-----------------------HHhhccc------
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAF-----PKLECTCFDL----PH-----------------------VVNGLES------ 184 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~-----P~l~~~~~Dl----p~-----------------------v~~~a~~------ 184 (209)
.+..||++|+..|.-+..+++.. |+-+++++|. |+ .++.+++
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 47899999999999998877654 5778999994 11 1222332
Q ss_pred C-CCCeEEEEccCCCC---CC-C-CcEEEe
Q 046346 185 D-LVNLKYVGGDMFKA---IS-P-ADAVVL 208 (209)
Q Consensus 185 ~-~~ri~~~~gD~~~~---~p-~-~D~~~l 208 (209)
. .++|+++.||+.+- +| . +|++++
T Consensus 186 l~~~~I~li~Gda~etL~~~~~~~~d~vfI 215 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDTLPTAPIDTLAVLRM 215 (282)
T ss_dssp CCSTTEEEEESCHHHHSTTCCCCCEEEEEE
T ss_pred CCcCceEEEEeCHHHHHhhCCCCCEEEEEE
Confidence 2 38999999999773 33 2 788765
No 299
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=93.00 E-value=0.13 Score=43.15 Aligned_cols=66 Identities=17% Similarity=0.266 Sum_probs=41.1
Q ss_pred cCCCeEEEecCCccHHHHH--------HHHH--------CCCCeEEEeech-----HHHhhcccC--CCC---eEEEEcc
Q 046346 142 EGLNSLVDVGGGTGTAAKA--------IAKA--------FPKLECTCFDLP-----HVVNGLESD--LVN---LKYVGGD 195 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~--------l~~~--------~P~l~~~~~Dlp-----~v~~~a~~~--~~r---i~~~~gD 195 (209)
+..-+|+|+||++|..+.. +.++ .|+.++..-|+| .+....... ..+ +.-++|.
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGS 129 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESC
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchh
Confidence 4557899999999966553 3332 577888999997 222221110 012 3446788
Q ss_pred CCC-CCCC--CcEEE
Q 046346 196 MFK-AISP--ADAVV 207 (209)
Q Consensus 196 ~~~-~~p~--~D~~~ 207 (209)
|+. -+|. .|+++
T Consensus 130 Fy~rlfp~~S~d~v~ 144 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIH 144 (359)
T ss_dssp SSSCCSCTTCBSCEE
T ss_pred hhhccCCCCceEEEE
Confidence 988 4675 77764
No 300
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=89.97 E-value=0.55 Score=37.07 Aligned_cols=40 Identities=23% Similarity=0.180 Sum_probs=33.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcc
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLE 183 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~ 183 (209)
.....|||..||+|+.+.+..+. +-+++++|+ |..++.++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~~ 251 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQAN 251 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHH
Confidence 35679999999999999999887 568999999 56666655
No 301
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=89.09 E-value=1.5 Score=35.80 Aligned_cols=55 Identities=18% Similarity=0.263 Sum_probs=43.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeechHHHhhccc--------CCCCeEEEEccCCC
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFP-KLECTCFDLPHVVNGLES--------DLVNLKYVGGDMFK 198 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P-~l~~~~~Dlp~v~~~a~~--------~~~ri~~~~gD~~~ 198 (209)
.+...||++|||-=.....+. .| +++++-+|.|.|++..++ ..++..+++.|+.+
T Consensus 101 ~g~~QvV~LGaGlDTra~Rl~--~~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d 164 (310)
T 2uyo_A 101 DGIRQFVILASGLDSRAYRLD--WPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ 164 (310)
T ss_dssp TTCCEEEEETCTTCCHHHHSC--CCTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS
T ss_pred hCCCeEEEeCCCCCchhhhcc--CCCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHh
Confidence 456789999999888866664 35 478899999999986554 25688999999986
No 302
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=87.18 E-value=0.66 Score=37.46 Aligned_cols=63 Identities=16% Similarity=0.019 Sum_probs=49.1
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc---CCCCeEEEEccCCCC----CC---CCcEEEe
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES---DLVNLKYVGGDMFKA----IS---PADAVVL 208 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~---~~~ri~~~~gD~~~~----~p---~~D~~~l 208 (209)
...++|+=+|||.++.++++ +.-+++.+|+ +..++..++ ..+|++++..|.++. .| .+|+|++
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS--~~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfi 165 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLR--SQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFI 165 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSC--TTSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEE
T ss_pred CCCceeEeCCcHHHHHHHcC--CCCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEE
Confidence 56789999999999999999 4578999999 666665554 246899999997651 12 3899986
No 303
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=87.17 E-value=0.88 Score=38.56 Aligned_cols=40 Identities=13% Similarity=0.114 Sum_probs=32.5
Q ss_pred cCCCeEEEecCCccHHHHHHH-HHCCC-CeEEEeec-hHHHhh
Q 046346 142 EGLNSLVDVGGGTGTAAKAIA-KAFPK-LECTCFDL-PHVVNG 181 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~-~~~P~-l~~~~~Dl-p~v~~~ 181 (209)
.+..+++|||++.|.++..++ +..|. .+++.++- |...+.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~ 267 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQT 267 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHH
Confidence 466899999999999999988 67776 78999996 555443
No 304
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=86.87 E-value=4.4 Score=29.76 Aligned_cols=58 Identities=16% Similarity=0.191 Sum_probs=41.2
Q ss_pred HHHHHHHHHHhhhHhhHHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec
Q 046346 114 LNNFFNEAMASDARLATSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL 175 (209)
Q Consensus 114 ~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl 175 (209)
+...|.+-|..... -..+...... .-..-|+|+|=|+|.-=..+.+.+|+-++.++|+
T Consensus 15 RLDsfirRltaQR~-~L~~a~~~v~---~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR 72 (174)
T 3iht_A 15 RLDLFIDRMVSQRA-CLEHAIAQTA---GLSGPVYELGLGNGRTYHHLRQHVQGREIYVFER 72 (174)
T ss_dssp HHHHHHHHHHHHHH-HHHHHHHHTT---TCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEES
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHhc---CCCCceEEecCCCChhHHHHHHhCCCCcEEEEEe
Confidence 34556555553222 1233333332 3357899999999999999999999999999998
No 305
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=86.06 E-value=1.6 Score=38.30 Aligned_cols=66 Identities=11% Similarity=0.004 Sum_probs=43.9
Q ss_pred CCCeEEEecCCccHHHHHHHHHC-------------CCCeEEEeec-hHHHhhccc-----CCCCeEEEEccCCC-CC--
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAF-------------PKLECTCFDL-PHVVNGLES-----DLVNLKYVGGDMFK-AI-- 200 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~-------------P~l~~~~~Dl-p~v~~~a~~-----~~~ri~~~~gD~~~-~~-- 200 (209)
...+|+|-.||+|.++.+..++. .+....++|+ +.+...|+- ..+.-.+..+|.+. +.
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~~ 296 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLRE 296 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGGG
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCchhh
Confidence 35699999999999998876542 1346788998 555555542 22334567788775 21
Q ss_pred --C--CCcEEEe
Q 046346 201 --S--PADAVVL 208 (209)
Q Consensus 201 --p--~~D~~~l 208 (209)
+ .+|+|+.
T Consensus 297 ~~~~~~fD~Il~ 308 (530)
T 3ufb_A 297 MGDKDRVDVILT 308 (530)
T ss_dssp CCGGGCBSEEEE
T ss_pred hcccccceEEEe
Confidence 1 3898874
No 306
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=85.68 E-value=1.3 Score=36.95 Aligned_cols=68 Identities=18% Similarity=0.142 Sum_probs=49.6
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhccc-----------CCCCeEEEEccCCC--C-CCC-Cc
Q 046346 141 FEGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLES-----------DLVNLKYVGGDMFK--A-ISP-AD 204 (209)
Q Consensus 141 ~~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~-----------~~~ri~~~~gD~~~--~-~p~-~D 204 (209)
-....+|||+.+|+|.=+..|++..++-+++..|+ +.-+...++ ...++.....|... + .+. +|
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD 225 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYD 225 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEE
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCC
Confidence 44568999999999999999999888777889998 333332221 23578888888765 2 344 89
Q ss_pred EEEe
Q 046346 205 AVVL 208 (209)
Q Consensus 205 ~~~l 208 (209)
.|++
T Consensus 226 ~VLl 229 (359)
T 4fzv_A 226 RVLV 229 (359)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8875
No 307
>3b73_A PHIH1 repressor-like protein; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 2.12A {Haloarcula marismortui atcc 43049}
Probab=84.76 E-value=0.54 Score=32.43 Aligned_cols=45 Identities=22% Similarity=0.216 Sum_probs=30.3
Q ss_pred cCchhHhhhCCCCCCHHHHHH-----------------HHhCCCCC-CCCCceecCHhhhhhhc
Q 046346 38 LGIPDIINKHGKPMTLNELQK-----------------LVSSGNNN-DEEQGYVLTNASKLLLK 83 (209)
Q Consensus 38 lglfd~L~~~g~~~t~~eLA~-----------------L~~~g~~e-~~~~~y~~t~~s~~l~~ 83 (209)
..|++.|..+ +++|+.+||+ |...|+++ ...+.|.+|+.++.+..
T Consensus 16 ~~IL~~L~~~-g~~s~~eLA~~l~~giS~~aVs~rL~~Le~~GLV~~~~rg~Y~LT~~G~~~l~ 78 (111)
T 3b73_A 16 DRILEIIHEE-GNGSPKELEDRDEIRISKSSVSRRLKKLADHDLLQPLANGVYVITEEGEAYLN 78 (111)
T ss_dssp HHHHHHHHHH-SCBCHHHHHTSTTCCSCHHHHHHHHHHHHHTTSEEECSTTCEEECHHHHHHHT
T ss_pred HHHHHHHHHc-CCCCHHHHHHHHhcCCCHHHHHHHHHHHHHCCCEEecCCceEEECchHHHHHH
Confidence 4455666554 4677777765 77888854 34458999999975544
No 308
>1y0u_A Arsenical resistance operon repressor, putative; structural genomics, protein structure initiative, PSI; HET: MSE; 1.60A {Archaeoglobus fulgidus} SCOP: a.4.5.5
Probab=84.74 E-value=0.3 Score=32.35 Aligned_cols=47 Identities=17% Similarity=0.202 Sum_probs=34.7
Q ss_pred HHHHHHHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCCCCceecCHhhh
Q 046346 30 MTLKCSIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDEEQGYVLTNASK 79 (209)
Q Consensus 30 ~~l~~a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~~~~y~~t~~s~ 79 (209)
.++..-.++.|+..| . ++.|+.|||+ |...|+++...+.|.+|+.++
T Consensus 26 ~~l~~~~r~~Il~~L-~--~~~~~~eLa~~l~is~~tv~~~L~~L~~~Glv~~~~g~y~l~~~g~ 87 (96)
T 1y0u_A 26 YAVTNPVRRKILRML-D--KGRSEEEIMQTLSLSKKQLDYHLKVLEAGFCIERVGERWVVTDAGK 87 (96)
T ss_dssp HHHSCHHHHHHHHHH-H--TTCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTEEEECTTTC
T ss_pred HHhCCHHHHHHHHHH-c--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEECCEEEECCCch
Confidence 444455677788999 5 6899999999 678898442226899998764
No 309
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=83.29 E-value=0.97 Score=38.71 Aligned_cols=61 Identities=25% Similarity=0.408 Sum_probs=39.4
Q ss_pred CCcHHHHHHHHHHHhhhHhhHHHHHHhccccccCCCeEEEecCCccHHHHHHHHHCC-----CCeEEEeechHHH
Q 046346 110 DEPKLNNFFNEAMASDARLATSVMIQKCKNVFEGLNSLVDVGGGTGTAAKAIAKAFP-----KLECTCFDLPHVV 179 (209)
Q Consensus 110 ~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P-----~l~~~~~Dlp~v~ 179 (209)
..|+....|...+..+ +++.+. ..+..+|+++|.|+|.++..+++... ..+.++++..+.+
T Consensus 113 TAPeiS~~FGe~la~~-------~~~~~~--~~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~L 178 (432)
T 4f3n_A 113 TAPELSPLFAQTLARP-------VAQALD--ASGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGEL 178 (432)
T ss_dssp SCGGGHHHHHHHHHHH-------HHHHHH--HHTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSS
T ss_pred CchhhhHHHHHHHHHH-------HHHHHH--hcCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHH
Confidence 3466777777766532 222222 12357999999999999998876542 2368888874333
No 310
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=82.43 E-value=0.33 Score=30.14 Aligned_cols=39 Identities=15% Similarity=0.298 Sum_probs=27.6
Q ss_pred HcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCC-CCCCceecC
Q 046346 37 QLGIPDIINKHGKPMTLNELQK---------------LVSSGNNN-DEEQGYVLT 75 (209)
Q Consensus 37 ~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e-~~~~~y~~t 75 (209)
+..|++.|..++.|+|..|||+ |...|+++ ...+.|.++
T Consensus 12 ~~~IL~~L~~~~~~~s~~eLA~~lglsr~tv~~~l~~L~~~G~I~~~~~G~y~lg 66 (67)
T 2heo_A 12 EQKILQVLSDDGGPVAIFQLVKKCQVPKKTLNQVLYRLKKEDRVSSPSPKYWSIG 66 (67)
T ss_dssp HHHHHHHHHHHCSCEEHHHHHHHHCSCHHHHHHHHHHHHHTTSEEEEETTEEEEC
T ss_pred HHHHHHHHHHcCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCcEecCCCceEeeC
Confidence 4457777876546899999999 67788744 445677764
No 311
>3ech_A MEXR, multidrug resistance operon repressor; winged helix, helix-turn-helix, protein-peptide complex; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.28 PDB: 1lnw_A 3mex_A
Probab=81.89 E-value=4.4 Score=28.12 Aligned_cols=48 Identities=17% Similarity=0.276 Sum_probs=34.5
Q ss_pred HHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCC----CC---ceecCHhhhhhhc
Q 046346 35 SIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDE----EQ---GYVLTNASKLLLK 83 (209)
Q Consensus 35 a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~----~~---~y~~t~~s~~l~~ 83 (209)
..++.++..|... +++|..+||+ |...|+++.. +. .+.+|+.|+.+..
T Consensus 37 ~~~~~vL~~l~~~-~~~t~~eLa~~l~~~~~tvs~~l~~L~~~Glv~r~~~~~DrR~~~~~LT~~G~~~~~ 106 (142)
T 3ech_A 37 PPDVHVLKLIDEQ-RGLNLQDLGRQMCRDKALITRKIRELEGRNLVRRERNPSDQRSFQLFLTDEGLAIHL 106 (142)
T ss_dssp HHHHHHHHHHHHT-TTCCHHHHHHHHC---CHHHHHHHHHHHTTSEEC----------CCEECHHHHHHHH
T ss_pred HHHHHHHHHHHhC-CCcCHHHHHHHhCCCHHHHHHHHHHHHHCCCEeeccCCCCCCeeeeEECHHHHHHHH
Confidence 5666788888876 6899999999 7788884421 11 3789998875553
No 312
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=81.76 E-value=1.3 Score=36.09 Aligned_cols=59 Identities=19% Similarity=0.178 Sum_probs=39.9
Q ss_pred ccCCCeEEEecC------CccHHHHHHHHHCCC-CeEEEeechHHHhhcccCCCCeEEEEccCCCC-CCC-CcEEE
Q 046346 141 FEGLNSLVDVGG------GTGTAAKAIAKAFPK-LECTCFDLPHVVNGLESDLVNLKYVGGDMFKA-ISP-ADAVV 207 (209)
Q Consensus 141 ~~~~~~vlDvGg------G~G~~~~~l~~~~P~-l~~~~~Dlp~v~~~a~~~~~ri~~~~gD~~~~-~p~-~D~~~ 207 (209)
.+...+|||+|. .+|.+ .+.+..|. ...+..|+.++...+ + .++.||+.+. ... +|+|+
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~sda----~--~~IqGD~~~~~~~~k~DLVI 174 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVSDA----D--STLIGDCATVHTANKWDLII 174 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBCSS----S--EEEESCGGGEEESSCEEEEE
T ss_pred ecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccccCC----C--eEEEccccccccCCCCCEEE
Confidence 456789999995 88884 44556886 689999986554321 1 4488887652 222 78775
No 313
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=78.97 E-value=4 Score=28.31 Aligned_cols=61 Identities=15% Similarity=0.183 Sum_probs=39.3
Q ss_pred CCeEEEecCCccHHHHHHHHHC--CCCeEEEeec-hHHHhhcccCCCCeEEEEccCCCC-------CCCCcEEEe
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAF--PKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFKA-------ISPADAVVL 208 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~--P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~~-------~p~~D~~~l 208 (209)
..+++-+|+| .++..+++.. -+.+++++|. ++.++.+++ ..+.++.+|..++ ...+|+++.
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~--~~~~~~~gd~~~~~~l~~~~~~~~d~vi~ 76 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLED--EGFDAVIADPTDESFYRSLDLEGVSAVLI 76 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--TTCEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH--CCCcEEECCCCCHHHHHhCCcccCCEEEE
Confidence 3578889885 4555544443 2567899998 555555542 3577888998762 234788764
No 314
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=78.15 E-value=2.2 Score=35.33 Aligned_cols=32 Identities=44% Similarity=0.526 Sum_probs=27.8
Q ss_pred CCeEEEecCCccHHHHH--HHHHCCCCeEEEeec
Q 046346 144 LNSLVDVGGGTGTAAKA--IAKAFPKLECTCFDL 175 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~--l~~~~P~l~~~~~Dl 175 (209)
.++||-||+|.+.++.+ |++..|+++++++|-
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~ 35 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEP 35 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeC
Confidence 47899999999987765 788899999999995
No 315
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=77.97 E-value=6.7 Score=27.33 Aligned_cols=62 Identities=19% Similarity=0.203 Sum_probs=39.8
Q ss_pred CCeEEEecCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCCC-------CCCCcEEEe
Q 046346 144 LNSLVDVGGGT-GTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFKA-------ISPADAVVL 208 (209)
Q Consensus 144 ~~~vlDvGgG~-G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~~-------~p~~D~~~l 208 (209)
..+++-+|+|. |......+.+ -+.+++++|. ++.++.+++ ..+.++.||..++ ...+|++++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~-~g~~v~vid~~~~~~~~~~~--~g~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLA-SDIPLVVIETSRTRVDELRE--RGVRAVLGNAANEEIMQLAHLECAKWLIL 77 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH-TTCCEEEEESCHHHHHHHHH--TTCEEEESCTTSHHHHHHTTGGGCSEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHHH--cCCCEEECCCCCHHHHHhcCcccCCEEEE
Confidence 35788899865 4443333333 2568999998 666666553 4677889998762 223787764
No 316
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=75.85 E-value=2.7 Score=34.62 Aligned_cols=64 Identities=8% Similarity=0.160 Sum_probs=44.3
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCe-EEEeec-hHHHhhcccCCCCeEEEEccCCCC----CC--CCcEEEe
Q 046346 145 NSLVDVGGGTGTAAKAIAKAFPKLE-CTCFDL-PHVVNGLESDLVNLKYVGGDMFKA----IS--PADAVVL 208 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~l~~~~P~l~-~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~~----~p--~~D~~~l 208 (209)
.+++|+-||.|.++.++.++.-..+ +...|. +..++..+...+...++.+|..+- ++ .+|+++.
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~ 74 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILM 74 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEE
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEE
Confidence 4799999999999999999854333 567787 555655554334455677887651 33 3788765
No 317
>2g7u_A Transcriptional regulator; ICLR family, structural genomics, PSI, protein structure initiative, midwest center for struc genomics; 2.30A {Rhodococcus SP}
Probab=75.05 E-value=1 Score=35.46 Aligned_cols=44 Identities=18% Similarity=0.136 Sum_probs=32.9
Q ss_pred cCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCCCCceecCHhhhhh
Q 046346 38 LGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDEEQGYVLTNASKLL 81 (209)
Q Consensus 38 lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~~~~y~~t~~s~~l 81 (209)
+.|++.|...+++.|+.|||+ |...|+++..+++|.+++....|
T Consensus 17 l~iL~~l~~~~~~~~~~eia~~~gl~~stv~r~l~~L~~~G~v~~~~~~Y~Lg~~~~~l 75 (257)
T 2g7u_A 17 FAVLLAFDAQRPNPTLAELATEAGLSRPAVRRILLTLQKLGYVAGSGGRWSLTPRVLSI 75 (257)
T ss_dssp HHHHHTCSSSCSSCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTEEEECGGGHHH
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEeCCCEEEEcHHHHHH
Confidence 345677765446899999999 77899976556899999865433
No 318
>3mq0_A Transcriptional repressor of the blcabc operon; helix-turn-helix, GAF fold, transcription repressor; 1.79A {Agrobacterium tumefaciens}
Probab=74.82 E-value=0.93 Score=36.23 Aligned_cols=41 Identities=15% Similarity=0.174 Sum_probs=32.1
Q ss_pred cCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCC-CCCceecCHhh
Q 046346 38 LGIPDIINKHGKPMTLNELQK---------------LVSSGNNND-EEQGYVLTNAS 78 (209)
Q Consensus 38 lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~-~~~~y~~t~~s 78 (209)
+.|++.|...+++.|+.|||+ |+..|+++. .+++|.+++.-
T Consensus 33 l~IL~~l~~~~~~ltl~eia~~lgl~ksTv~RlL~tL~~~G~v~~~~~~~Y~LG~~~ 89 (275)
T 3mq0_A 33 VRILDLVAGSPRDLTAAELTRFLDLPKSSAHGLLAVMTELDLLARSADGTLRIGPHS 89 (275)
T ss_dssp HHHHHHHHHCSSCEEHHHHHHHHTCC--CHHHHHHHHHHTTSEEECTTSEEEECTHH
T ss_pred HHHHHHHhhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEECCCCcEEehHHH
Confidence 457888887656899999999 788999654 34789999864
No 319
>1mkm_A ICLR transcriptional regulator; structural genomics, winged helix-turn-helix, PSI, protein structure initiative; 2.20A {Thermotoga maritima} SCOP: a.4.5.33 d.110.2.2
Probab=71.80 E-value=2 Score=33.54 Aligned_cols=41 Identities=22% Similarity=0.272 Sum_probs=31.1
Q ss_pred cCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCC-CCCceecCHhh
Q 046346 38 LGIPDIINKHGKPMTLNELQK---------------LVSSGNNND-EEQGYVLTNAS 78 (209)
Q Consensus 38 lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~-~~~~y~~t~~s 78 (209)
+.|++.|...++++|+.|||+ |...|+++. ..++|.+++..
T Consensus 11 l~iL~~l~~~~~~~~~~ela~~~gl~~stv~r~l~~L~~~G~v~~~~~~~Y~lg~~~ 67 (249)
T 1mkm_A 11 FEILDFIVKNPGDVSVSEIAEKFNMSVSNAYKYMVVLEEKGFVLRKKDKRYVPGYKL 67 (249)
T ss_dssp HHHHHHHHHCSSCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEECTTSCEEECTHH
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCcEEECCCCcEEECHHH
Confidence 456777776545899999999 778998654 36889998854
No 320
>3fm5_A Transcriptional regulator; MCSG, PF04017, PSI, MARR, structu genomics, protein structure initiative, midwest center for structural genomics; HET: GOL; 2.00A {Rhodococcus jostii}
Probab=71.13 E-value=13 Score=25.80 Aligned_cols=49 Identities=8% Similarity=-0.004 Sum_probs=32.6
Q ss_pred HHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCCC----C---ceecCHhhhhhhc
Q 046346 35 SIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDEE----Q---GYVLTNASKLLLK 83 (209)
Q Consensus 35 a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~~----~---~y~~t~~s~~l~~ 83 (209)
..++.++..|...++++|..+||+ |...|++++.. . .+.+|+.|+.+..
T Consensus 39 ~~q~~vL~~l~~~~~~~t~~eLa~~l~i~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~LT~~G~~~~~ 109 (150)
T 3fm5_A 39 VRSYSVLVLACEQAEGVNQRGVAATMGLDPSQIVGLVDELEERGLVVRTLDPSDRRNKLIAATEEGRRLRD 109 (150)
T ss_dssp HHHHHHHHHHHHSTTCCCSHHHHHHHTCCHHHHHHHHHHHHTTTSEEC-----------CEECHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCcCHHHHHHHHCCCHhHHHHHHHHHHHCCCEEeeCCccccchheeeECHHHHHHHH
Confidence 345556777765545789999999 77889854321 1 2789999876554
No 321
>3r4k_A Transcriptional regulator, ICLR family; DNA/RNA-binding 3-helical bundle, profilin-like, structural joint center for structural genomics, JCSG; 2.46A {Ruegeria SP}
Probab=70.23 E-value=0.81 Score=36.20 Aligned_cols=41 Identities=22% Similarity=0.293 Sum_probs=31.2
Q ss_pred cCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCCC--CceecCHhh
Q 046346 38 LGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDEE--QGYVLTNAS 78 (209)
Q Consensus 38 lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~~--~~y~~t~~s 78 (209)
+.|++.|...++++|+.|||+ |+..|+++..+ ++|.+++.-
T Consensus 9 l~IL~~l~~~~~~lsl~eia~~lgl~ksT~~RlL~tL~~~G~v~~~~~~~~Y~lG~~~ 66 (260)
T 3r4k_A 9 LTLLTYFNHGRLEIGLSDLTRLSGMNKATVYRLMSELQEAGFVEQVEGARSYRLGPQV 66 (260)
T ss_dssp HHHHTTCBTTBSEEEHHHHHHHHCSCHHHHHHHHHHHHHTTSEEECSSSSEEEECTTH
T ss_pred HHHHHHHhhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEcCCCCcEEcCHHH
Confidence 457777776446899999999 78899966433 799999853
No 322
>2ia2_A Putative transcriptional regulator; SAD, PSI-2, structural genomics, structure initiative, midwest center for structural genomic transcription; 2.10A {Rhodococcus SP}
Probab=70.07 E-value=1.2 Score=35.36 Aligned_cols=41 Identities=20% Similarity=0.319 Sum_probs=31.5
Q ss_pred cCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCCCCceecCHhh
Q 046346 38 LGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDEEQGYVLTNAS 78 (209)
Q Consensus 38 lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~~~~y~~t~~s 78 (209)
+.|++.|...+++.|+.|||+ |...|+++..+++|.+++..
T Consensus 24 l~iL~~l~~~~~~~~~~eia~~~gl~~stv~r~l~tL~~~G~v~~~~~~Y~Lg~~~ 79 (265)
T 2ia2_A 24 LAVIRCFDHRNQRRTLSDVARATDLTRATARRFLLTLVELGYVATDGSAFWLTPRV 79 (265)
T ss_dssp HHHHHTCCSSCSSEEHHHHHHHHTCCHHHHHHHHHHHHHHTSEEESSSEEEECGGG
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEecCCEEEEcHHH
Confidence 446777765446899999999 67889976667899998854
No 323
>1r7j_A Conserved hypothetical protein SSO10A; winged helix-turn-helix, two-stranded antiparallel coiled CO structural genomics, PSI; 1.47A {Sulfolobus solfataricus} SCOP: a.4.5.49 PDB: 1xsx_A
Probab=68.41 E-value=3.2 Score=27.49 Aligned_cols=32 Identities=22% Similarity=0.235 Sum_probs=25.5
Q ss_pred CCHHHHHH---------------HHhCCCCCCCCCceecCHhhhhhh
Q 046346 51 MTLNELQK---------------LVSSGNNNDEEQGYVLTNASKLLL 82 (209)
Q Consensus 51 ~t~~eLA~---------------L~~~g~~e~~~~~y~~t~~s~~l~ 82 (209)
++..+||. |...|+++...+.|.+|+.|..+.
T Consensus 21 ~~~t~La~~~~ls~~~~~~~l~~L~~~GLI~~~~~~~~LT~kG~~~l 67 (95)
T 1r7j_A 21 SPKTRIMYGANLSYALTGRYIKMLMDLEIIRQEGKQYMLTKKGEELL 67 (95)
T ss_dssp BCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTEEEECHHHHHHH
T ss_pred CCHHHHHHHhCcCHHHHHHHHHHHHHCCCeEEECCeeEEChhHHHHH
Confidence 67777777 788999776677899999997544
No 324
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=68.26 E-value=3.5 Score=33.38 Aligned_cols=33 Identities=18% Similarity=0.272 Sum_probs=29.5
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCC----CeEEEeec
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPK----LECTCFDL 175 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~----l~~~~~Dl 175 (209)
++..|+=||||.|....-|.+.+|+ ++.+++|=
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDP 96 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDG 96 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEES
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcC
Confidence 4579999999999999999999887 59999994
No 325
>2xrn_A HTH-type transcriptional regulator TTGV; DNA-binding protein, tetramer gene regulator, cooperative DN binding, multidrug binding protein; 2.90A {Pseudomonas putida} PDB: 2xro_A
Probab=67.37 E-value=1.8 Score=33.76 Aligned_cols=44 Identities=18% Similarity=0.159 Sum_probs=31.8
Q ss_pred cCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCC--CCceecCHhhhhh
Q 046346 38 LGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDE--EQGYVLTNASKLL 81 (209)
Q Consensus 38 lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~--~~~y~~t~~s~~l 81 (209)
+.|++.|...++++|+.|||+ |...|+++.. .++|.+++....|
T Consensus 9 l~iL~~l~~~~~~~s~~ela~~~gl~~stv~r~l~~L~~~G~v~~~~~~~~Y~lg~~~~~l 69 (241)
T 2xrn_A 9 ASIMRALGSHPHGLSLAAIAQLVGLPRSTVQRIINALEEEFLVEALGPAGGFRLGPALGQL 69 (241)
T ss_dssp HHHHHHHHTCTTCEEHHHHHHHTTSCHHHHHHHHHHHHTTTSEEECGGGCEEEECSHHHHH
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEeCCCCeEEECHHHHHH
Confidence 456777766545899999999 7788986543 3789999865433
No 326
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=66.16 E-value=25 Score=24.62 Aligned_cols=64 Identities=22% Similarity=0.168 Sum_probs=37.1
Q ss_pred CCCeEEEecCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCC-----C--CCCCcEEEe
Q 046346 143 GLNSLVDVGGGT-GTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFK-----A--ISPADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~-G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~-----~--~p~~D~~~l 208 (209)
...+|+-+|+|. |......+.+. +.+++++|. ++.++.++. ...+.++.+|..+ . ...+|+++.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~~~~~~~~~-~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~ 90 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNEYAFHRLNS-EFSGFTVVGDAAEFETLKECGMEKADMVFA 90 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGGGGSCT-TCCSEEEESCTTSHHHHHTTTGGGCSEEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHh-cCCCcEEEecCCCHHHHHHcCcccCCEEEE
Confidence 357889998754 44444444443 358899998 555554431 2245567777643 1 223788764
No 327
>3jw4_A Transcriptional regulator, MARR/EMRR family; DNA-binding protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Clostridium acetobutylicum} SCOP: a.4.5.0
Probab=65.85 E-value=21 Score=24.58 Aligned_cols=47 Identities=13% Similarity=0.131 Sum_probs=32.0
Q ss_pred HcCchhHhhhCC-CCCCHHHHHH---------------HHhCCCCCCC----CC---ceecCHhhhhhhc
Q 046346 37 QLGIPDIINKHG-KPMTLNELQK---------------LVSSGNNNDE----EQ---GYVLTNASKLLLK 83 (209)
Q Consensus 37 ~lglfd~L~~~g-~~~t~~eLA~---------------L~~~g~~e~~----~~---~y~~t~~s~~l~~ 83 (209)
++.++..|...+ +++|..+||+ |...|++++. +. .+.+|+.|+.+..
T Consensus 43 q~~vL~~l~~~~~~~~t~~eLa~~l~~~~~~vs~~l~~L~~~Glv~r~~~~~DrR~~~~~LT~~G~~~~~ 112 (148)
T 3jw4_A 43 QGRMIGYIYENQESGIIQKDLAQFFGRRGASITSMLQGLEKKGYIERRIPENNARQKNIYVLPKGAALVE 112 (148)
T ss_dssp HHHHHHHHHHHTTTCCCHHHHHHC------CHHHHHHHHHHTTSBCCC--------CCCCBCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHCCChhHHHHHHHHHHHCCCEEeeCCCCCchhheeeECHHHHHHHH
Confidence 344666776642 6899999999 7788985432 22 4789999876553
No 328
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=65.53 E-value=6.3 Score=33.13 Aligned_cols=31 Identities=29% Similarity=0.504 Sum_probs=26.4
Q ss_pred CeEEEecCCccHHHH--HHHHHCCCCeEEEeec
Q 046346 145 NSLVDVGGGTGTAAK--AIAKAFPKLECTCFDL 175 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~--~l~~~~P~l~~~~~Dl 175 (209)
++||-||||.|.+.. .|.+..|+.+++++|.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~ 35 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISD 35 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcC
Confidence 579999999997755 4778889999999995
No 329
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=65.14 E-value=17 Score=30.16 Aligned_cols=62 Identities=19% Similarity=0.266 Sum_probs=43.2
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeE-EEeec-hHHHhhcccCCCCeEEEEccCCCC----C-------CCCcEEEe
Q 046346 145 NSLVDVGGGTGTAAKAIAKAFPKLEC-TCFDL-PHVVNGLESDLVNLKYVGGDMFKA----I-------SPADAVVL 208 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~l~~~~P~l~~-~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~~----~-------p~~D~~~l 208 (209)
-+++|+-||.|.++..+.++. .+. ..+|. +..++..+...+...++.+|..+- + +.+|+++.
T Consensus 3 ~~vidLFsG~GGlslG~~~aG--~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~g 77 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG--FDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIG 77 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT--CEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEE
T ss_pred CeEEEEccCcCHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEe
Confidence 378999999999999999985 554 47887 455544443344567778887651 2 23788764
No 330
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=64.30 E-value=36 Score=27.85 Aligned_cols=56 Identities=18% Similarity=0.236 Sum_probs=44.9
Q ss_pred CCCeEEEecCCccHHHHHHHHH-CCCCeEEEeechHHHhhccc----------------------------CCCCeEEEE
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKA-FPKLECTCFDLPHVVNGLES----------------------------DLVNLKYVG 193 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~-~P~l~~~~~Dlp~v~~~a~~----------------------------~~~ri~~~~ 193 (209)
+...||-+|||-=...-.+... .++++.+=+|+|++++.=++ ..++..+++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~ 169 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIG 169 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEc
Confidence 5689999999999999988876 36888999999999863111 157899999
Q ss_pred ccCCC
Q 046346 194 GDMFK 198 (209)
Q Consensus 194 gD~~~ 198 (209)
.|+.+
T Consensus 170 ~DL~d 174 (334)
T 3iei_A 170 ADLRD 174 (334)
T ss_dssp CCTTC
T ss_pred ccccc
Confidence 99976
No 331
>3nrv_A Putative transcriptional regulator (MARR/EMRR FAM; PSI-2, protein structure initiati structural genomics; HET: MSE; 2.00A {Acinetobacter SP}
Probab=64.07 E-value=4.4 Score=28.22 Aligned_cols=48 Identities=10% Similarity=0.113 Sum_probs=34.0
Q ss_pred HHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCC-------CCceecCHhhhhhhc
Q 046346 35 SIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDE-------EQGYVLTNASKLLLK 83 (209)
Q Consensus 35 a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~-------~~~y~~t~~s~~l~~ 83 (209)
..++.++..|... +++|..+||+ |...|+++.. .-.+.+|+.|+.+..
T Consensus 40 ~~~~~iL~~l~~~-~~~t~~ela~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~lT~~G~~~~~ 109 (148)
T 3nrv_A 40 MTEWRIISVLSSA-SDCSVQKISDILGLDKAAVSRTVKKLEEKKYIEVNGHSEDKRTYAINLTEMGQELYE 109 (148)
T ss_dssp HHHHHHHHHHHHS-SSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEC---------CCBEECHHHHHHHH
T ss_pred HHHHHHHHHHHcC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeecCCCCcceeEeEECHhHHHHHH
Confidence 3455677778776 5899999999 7788984422 235889999876553
No 332
>2o0y_A Transcriptional regulator; ICLR-family, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.00A {Rhodococcus SP}
Probab=61.79 E-value=3.4 Score=32.53 Aligned_cols=41 Identities=12% Similarity=0.251 Sum_probs=29.5
Q ss_pred cCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCC-CCceecCHhh
Q 046346 38 LGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDE-EQGYVLTNAS 78 (209)
Q Consensus 38 lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~-~~~y~~t~~s 78 (209)
+.|++.|...++++|+.|||+ |...|+++.. .++|.+++..
T Consensus 26 l~iL~~l~~~~~~~~~~eia~~~gl~kstv~r~l~tL~~~G~v~~~~~~~Y~lg~~~ 82 (260)
T 2o0y_A 26 IDLLELFDAAHPTRSLKELVEGTKLPKTTVVRLVATMCARSVLTSRADGSYSLGPEM 82 (260)
T ss_dssp HHHHTTCBTTBSSBCHHHHHHHHCCCHHHHHHHHHHHHHTTSEEECTTSCEEECHHH
T ss_pred HHHHHHHhhCCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEECCCCeEEecHHH
Confidence 345677754336899999999 7788986543 3389998854
No 333
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=61.54 E-value=23 Score=23.81 Aligned_cols=61 Identities=18% Similarity=0.263 Sum_probs=35.7
Q ss_pred CeEEEecCCccHHHHHHHHHC--CCCeEEEeec-hHHHhhcccCCCCeEEEEccCCCC-------CCCCcEEEe
Q 046346 145 NSLVDVGGGTGTAAKAIAKAF--PKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFKA-------ISPADAVVL 208 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~l~~~~--P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~~-------~p~~D~~~l 208 (209)
.+++-+|+ |.++..+++.. .+.+++++|. ++.++..++ ...+.++.+|..++ ...+|+++.
T Consensus 5 m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~-~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 5 MYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA-EIDALVINGDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HCSSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH-hcCcEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence 46778876 55555544432 2467889998 444444331 12456777887541 334888765
No 334
>2fa5_A Transcriptional regulator MARR/EMRR family; multiple antibiotics resistance repressor, XCC structural genomics, X-RAY diffraction; 1.80A {Xanthomonas campestris}
Probab=60.95 E-value=6 Score=28.00 Aligned_cols=47 Identities=15% Similarity=0.159 Sum_probs=33.1
Q ss_pred HHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCCC-------CceecCHhhhhhhc
Q 046346 36 IQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDEE-------QGYVLTNASKLLLK 83 (209)
Q Consensus 36 ~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~~-------~~y~~t~~s~~l~~ 83 (209)
.++.|+..|... +++|..+||+ |...|+++... -.|.+|+.|+.+..
T Consensus 50 ~~~~iL~~l~~~-~~~t~~ela~~l~is~~tvs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~~ 118 (162)
T 2fa5_A 50 PEWRVITILALY-PGSSASEVSDRTAMDKVAVSRAVARLLERGFIRRETHGDDRRRSMLALSPAGRQVYE 118 (162)
T ss_dssp HHHHHHHHHHHS-TTCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEC---------CCCEECHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeeecCCCCCCeeEEEECHHHHHHHH
Confidence 345577888775 6899999999 77889854321 34789999875553
No 335
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=60.43 E-value=10 Score=30.99 Aligned_cols=61 Identities=16% Similarity=0.113 Sum_probs=39.0
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCe-EEEeec-hHHHhhcccCCCCeEEEEccCCC----CCCCCcEEEe
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAFPKLE-CTCFDL-PHVVNGLESDLVNLKYVGGDMFK----AISPADAVVL 208 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~P~l~-~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~----~~p~~D~~~l 208 (209)
..+++|+-||.|.++.++.++. .+ +...|. +..++..+...+... .+|..+ .+|.+|+++.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG--~~~v~~~e~d~~a~~t~~~N~~~~~--~~Di~~~~~~~~~~~D~l~~ 77 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCG--AECVYSNEWDKYAQEVYEMNFGEKP--EGDITQVNEKTIPDHDILCA 77 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT--CEEEEEECCCHHHHHHHHHHHSCCC--BSCGGGSCGGGSCCCSEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHCC--CeEEEEEeCCHHHHHHHHHHcCCCC--cCCHHHcCHhhCCCCCEEEE
Confidence 4689999999999999999874 55 456787 444444332111111 467654 3456788764
No 336
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=60.32 E-value=28 Score=26.68 Aligned_cols=62 Identities=15% Similarity=0.063 Sum_probs=39.0
Q ss_pred CCCeEEEecCCccHHHHH--HHHHCCCCeEEEeec---hHHHhhcccCCCCeEEEEccCCC-CCCCCcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKA--IAKAFPKLECTCFDL---PHVVNGLESDLVNLKYVGGDMFK-AISPADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~--l~~~~P~l~~~~~Dl---p~v~~~a~~~~~ri~~~~gD~~~-~~p~~D~~~l 208 (209)
...+||-||||.=..... |++. +.++++++- ++..+.+. ..+++++.++|-. .+..+|+++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~--GA~VtVvap~~~~~l~~l~~--~~~i~~i~~~~~~~dL~~adLVIa 97 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQE--GAAITVVAPTVSAEINEWEA--KGQLRVKRKKVGEEDLLNVFFIVV 97 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGG--CCCEEEECSSCCHHHHHHHH--TTSCEEECSCCCGGGSSSCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEECCCCCHHHHHHHH--cCCcEEEECCCCHhHhCCCCEEEE
Confidence 468899999985444432 3343 456777764 23222222 4678898888865 4666888874
No 337
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=59.88 E-value=17 Score=26.24 Aligned_cols=61 Identities=11% Similarity=0.117 Sum_probs=35.4
Q ss_pred CCeEEEecCCccHHHHHHHHHC--C-CCeEEEeec-hHHHhhcccCCCCeEEEEccCCC-----C---CCCCcEEEe
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAF--P-KLECTCFDL-PHVVNGLESDLVNLKYVGGDMFK-----A---ISPADAVVL 208 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~--P-~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~-----~---~p~~D~~~l 208 (209)
..+++-+|+| .++..+++.. - +.+++++|. ++.++.+++ ..+..+.+|..+ . ...+|++++
T Consensus 39 ~~~v~IiG~G--~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~--~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~ 111 (183)
T 3c85_A 39 HAQVLILGMG--RIGTGAYDELRARYGKISLGIEIREEAAQQHRS--EGRNVISGDATDPDFWERILDTGHVKLVLL 111 (183)
T ss_dssp TCSEEEECCS--HHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH--TTCCEEECCTTCHHHHHTBCSCCCCCEEEE
T ss_pred CCcEEEECCC--HHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH--CCCCEEEcCCCCHHHHHhccCCCCCCEEEE
Confidence 3578888875 4444333322 1 457888998 555555442 235567777754 1 234788765
No 338
>1qbj_A Protein (double-stranded RNA specific adenosine D (ADAR1)); protein-Z-DNA complex, hydrolase-DNA complex; HET: DNA; 2.10A {Homo sapiens} SCOP: a.4.5.19 PDB: 3f21_A* 3f22_A* 3f23_A* 3irr_A* 3irq_D* 2gxb_A 2acj_A 2l54_A
Probab=59.22 E-value=5.8 Score=25.45 Aligned_cols=47 Identities=15% Similarity=0.203 Sum_probs=28.0
Q ss_pred HHcCchhHhhhCC--CCCCHHHHHH---------------HHhCCCCC---CCCCceecCHhhhhhh
Q 046346 36 IQLGIPDIINKHG--KPMTLNELQK---------------LVSSGNNN---DEEQGYVLTNASKLLL 82 (209)
Q Consensus 36 ~~lglfd~L~~~g--~~~t~~eLA~---------------L~~~g~~e---~~~~~y~~t~~s~~l~ 82 (209)
.+..|.+.|..++ .++|+.+||+ |...|+++ ..++.|...+......
T Consensus 11 ~~~~IL~~L~~~~pg~~~t~~eLA~~Lgvsr~tV~~~L~~Le~~G~I~~~g~~~~~W~i~~~~~~~~ 77 (81)
T 1qbj_A 11 QEQRILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEAGTPPLWKIAVSTQAWN 77 (81)
T ss_dssp HHHHHHHHHHHHCTTCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEESSSSCEEEEC-------
T ss_pred HHHHHHHHHHHcCCCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEecCCCCCeeEEeCcHHhcc
Confidence 3555777777652 3799999999 66778733 3457888877655443
No 339
>2x4h_A Hypothetical protein SSO2273; transcription; 2.30A {Sulfolobus solfataricus}
Probab=59.09 E-value=4.9 Score=27.84 Aligned_cols=35 Identities=26% Similarity=0.381 Sum_probs=27.2
Q ss_pred CCCCCHHHHHH---------------HHhCCCCCCCCCceecCHhhhhhh
Q 046346 48 GKPMTLNELQK---------------LVSSGNNNDEEQGYVLTNASKLLL 82 (209)
Q Consensus 48 g~~~t~~eLA~---------------L~~~g~~e~~~~~y~~t~~s~~l~ 82 (209)
+++.|..+||+ |...|+++.....|.+|+.+..+.
T Consensus 29 ~~~~s~~ela~~l~is~~tv~~~l~~Le~~Gli~r~~~~~~Lt~~g~~~~ 78 (139)
T 2x4h_A 29 GEGAKINRIAKDLKIAPSSVFEEVSHLEEKGLVKKKEDGVWITNNGTRSI 78 (139)
T ss_dssp TSCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTEEEECHHHHHHH
T ss_pred CCCcCHHHHHHHhCCChHHHHHHHHHHHHCCCEEecCCeEEEChhHHHHH
Confidence 36899999999 778898664447899999987554
No 340
>1tbx_A ORF F-93, hypothetical 11.0 kDa protein; sulfolobus spindle virus, winged helix, fusellovirus; 2.70A {Sulfolobus virus 1} SCOP: a.4.5.48
Probab=58.72 E-value=3.5 Score=26.89 Aligned_cols=44 Identities=18% Similarity=0.260 Sum_probs=29.0
Q ss_pred cCchhHhhhCCCCCCHHHH----HH---------------HHhCCCCCC----CCCceecCHhhhhhh
Q 046346 38 LGIPDIINKHGKPMTLNEL----QK---------------LVSSGNNND----EEQGYVLTNASKLLL 82 (209)
Q Consensus 38 lglfd~L~~~g~~~t~~eL----A~---------------L~~~g~~e~----~~~~y~~t~~s~~l~ 82 (209)
+.++..|... ++.|..+| |+ |...|++++ ....|.+|+.|+.+.
T Consensus 11 ~~iL~~l~~~-~~~~~~el~~~la~~l~is~~tvs~~l~~Le~~gli~r~~~~r~~~~~LT~~G~~~~ 77 (99)
T 1tbx_A 11 AIVLAYLYDN-EGIATYDLYKKVNAEFPMSTATFYDAKKFLIQEGFVKERQERGEKRLYLTEKGKLFA 77 (99)
T ss_dssp HHHHHHHTTC-TTCBHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEECHHHHHHH
T ss_pred HHHHHHHHHc-CCcCHHHHHHHHHHHcCCCHHHHHHHHHHHHHCCCEEEEecCCceEEEECHHHHHHH
Confidence 3455556554 57888888 55 677888442 334688999887554
No 341
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=58.22 E-value=42 Score=23.31 Aligned_cols=62 Identities=18% Similarity=0.168 Sum_probs=38.0
Q ss_pred CeEEEecCCccHHHHHHHHHC--CCCeEEEeec-h-HHHhhccc-CCCCeEEEEccCCCC-------CCCCcEEEe
Q 046346 145 NSLVDVGGGTGTAAKAIAKAF--PKLECTCFDL-P-HVVNGLES-DLVNLKYVGGDMFKA-------ISPADAVVL 208 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~l~~~~--P~l~~~~~Dl-p-~v~~~a~~-~~~ri~~~~gD~~~~-------~p~~D~~~l 208 (209)
.+++-+|+ |.++..+++.. -+.+++++|. + +..+.... ....+.++.||..++ +..+|+++.
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILA 77 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEE
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEE
Confidence 56777775 66666655543 2467888888 3 33322221 245688999998752 334787764
No 342
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=58.20 E-value=52 Score=24.68 Aligned_cols=61 Identities=16% Similarity=0.121 Sum_probs=40.8
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCe-EEEeec-hHHHhhcccCCCCeEEEEccCCCC-------CCCCcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLE-CTCFDL-PHVVNGLESDLVNLKYVGGDMFKA-------ISPADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~-~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~~-------~p~~D~~~l 208 (209)
...+++-+|+ |.++..+++..-... ++++|. ++.++.++ ..+.++.||..++ +..+|+++.
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~~---~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLR---SGANFVHGDPTRVSDLEKANVRGARAVIV 77 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHHH---TTCEEEESCTTCHHHHHHTTCTTCSEEEE
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHHh---cCCeEEEcCCCCHHHHHhcCcchhcEEEE
Confidence 3467888887 688888887765422 778887 55555444 4588999998752 334787764
No 343
>3df8_A Possible HXLR family transcriptional factor; APC89000, structural genomics, midwest center for structural genomics, MCSG; 1.65A {Thermoplasma volcanium} SCOP: a.4.5.0
Probab=57.63 E-value=4.6 Score=27.32 Aligned_cols=67 Identities=13% Similarity=0.044 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCc---hhHhhhCCC-CCCHHHHHH----HHhCCCCCCC---CCceecCHhhhhhh
Q 046346 15 AQIHVWNHIFNFINSMTLKCSIQLGI---PDIINKHGK-PMTLNELQK----LVSSGNNNDE---EQGYVLTNASKLLL 82 (209)
Q Consensus 15 ~~~~l~~~~~g~~~~~~l~~a~~lgl---fd~L~~~g~-~~t~~eLA~----L~~~g~~e~~---~~~y~~t~~s~~l~ 82 (209)
+...+++++.+.|....|....+-.. |..|.+. - .+|..-|+. |...|++++. .-.|.+|+.|+.+.
T Consensus 16 ~~~~~l~~l~~~wrl~IL~~L~~g~~~~~~~eL~~~-l~gis~~~ls~~L~~Le~~GlV~r~~~r~~~y~LT~~G~~l~ 93 (111)
T 3df8_A 16 PSESVLHLLGKKYTMLIISVLGNGSTRQNFNDIRSS-IPGISSTILSRRIKDLIDSGLVERRSGQITTYALTEKGMNVR 93 (111)
T ss_dssp TTSSTHHHHHSTTHHHHHHHHTSSSSCBCHHHHHHT-STTCCHHHHHHHHHHHHHTTSEEEEESSSEEEEECHHHHHHH
T ss_pred HHHHHHHHHcCccHHHHHHHHhcCCCCCCHHHHHHH-ccCCCHHHHHHHHHHHHHCCCEEEeecCcEEEEECccHHHHH
Confidence 45667777777887777765432222 4445442 2 355555554 7889985533 45799999997554
No 344
>3cdh_A Transcriptional regulator, MARR family; helix-turn-hleix, structura genomics, PSI-2, protein structure initiative; 2.69A {Silicibacter pomeroyi dss-3}
Probab=56.91 E-value=6.1 Score=27.75 Aligned_cols=46 Identities=15% Similarity=0.211 Sum_probs=32.2
Q ss_pred HcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCC----C---CceecCHhhhhhhc
Q 046346 37 QLGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDE----E---QGYVLTNASKLLLK 83 (209)
Q Consensus 37 ~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~----~---~~y~~t~~s~~l~~ 83 (209)
++.++..|... +++|..+||+ |...|+++.. + -.+.+|+.|+.+..
T Consensus 45 ~~~iL~~l~~~-~~~t~~ela~~l~i~~~tvs~~l~~Le~~Glv~r~~~~~d~R~~~~~lT~~G~~~~~ 112 (155)
T 3cdh_A 45 EWRVLACLVDN-DAMMITRLAKLSLMEQSRMTRIVDQMDARGLVTRVADAKDKRRVRVRLTDDGRALAE 112 (155)
T ss_dssp HHHHHHHHSSC-SCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEECC------CCCEEECHHHHHHHH
T ss_pred HHHHHHHHHHC-CCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeccCCCcCCeeEeEECHHHHHHHH
Confidence 45577777765 6899999999 7788884421 1 24789999875543
No 345
>1u2w_A CADC repressor, cadmium efflux system accessory protein; LEAD, SOFT metal ION resistance, ARSR/SM family, DNA binding protein; 1.90A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 3f72_A
Probab=56.87 E-value=4.8 Score=27.63 Aligned_cols=49 Identities=14% Similarity=0.175 Sum_probs=32.8
Q ss_pred HHHHHHHHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCC-CCCC---ceecCHhh
Q 046346 29 SMTLKCSIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNN-DEEQ---GYVLTNAS 78 (209)
Q Consensus 29 ~~~l~~a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e-~~~~---~y~~t~~s 78 (209)
..+|.--.++.|+..|... ++.|+.+||+ |...|+++ ...| .|.+++.+
T Consensus 36 ~~al~~~~rl~IL~~L~~~-~~~s~~eLa~~l~is~stvs~~L~~L~~~Glv~~~~~gr~~~y~l~~~~ 103 (122)
T 1u2w_A 36 LKAIADENRAKITYALCQD-EELCVCDIANILGVTIANASHHLRTLYKQGVVNFRKEGKLALYSLGDEH 103 (122)
T ss_dssp HHHHHSHHHHHHHHHHHHS-SCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEC----CCEEEESCHH
T ss_pred HHHhCCHHHHHHHHHHHHC-CCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEECCEEEEEECHHH
Confidence 4444455677888888754 6899999999 66788743 2222 47777754
No 346
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=56.27 E-value=19 Score=26.36 Aligned_cols=54 Identities=24% Similarity=0.252 Sum_probs=38.3
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc-CCCCeEEEEccC
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES-DLVNLKYVGGDM 196 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~-~~~ri~~~~gD~ 196 (209)
+....--+.||||.=..-.+.++|++|+.+.--+.....+++ ...+|=.+.+.+
T Consensus 60 g~~d~GIliCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~hNnaNVL~lG~rv 114 (162)
T 2vvp_A 60 DPGSLGIVLGGSGNGEQIAANKVPGARCALAWSVQTAALAREHNNAQLIGIGGRM 114 (162)
T ss_dssp STTCEEEEEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHTTCCSEEEEEGGG
T ss_pred CCCceEEEEeCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccc
Confidence 334456788999999999999999999866666777777764 334444444443
No 347
>2hr3_A Probable transcriptional regulator; MCSG, structural genomics, PSI-2, protein structure initiati midwest center for structural genomics; 2.40A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=56.05 E-value=7.1 Score=27.03 Aligned_cols=48 Identities=21% Similarity=0.149 Sum_probs=33.6
Q ss_pred HHHcCchhHhhh-CCCCCCHHHHHH---------------HHhCCCCCCC----C---CceecCHhhhhhhc
Q 046346 35 SIQLGIPDIINK-HGKPMTLNELQK---------------LVSSGNNNDE----E---QGYVLTNASKLLLK 83 (209)
Q Consensus 35 a~~lglfd~L~~-~g~~~t~~eLA~---------------L~~~g~~e~~----~---~~y~~t~~s~~l~~ 83 (209)
..++.++..|.. . ++.|..+||+ |...|+++.. + -.+.+|+.|+.+..
T Consensus 35 ~~~~~iL~~l~~~~-~~~~~~~la~~l~i~~~~vs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~~ 105 (147)
T 2hr3_A 35 FSQLVVLGAIDRLG-GDVTPSELAAAERMRSSNLAALLRELERGGLIVRHADPQDGRRTRVSLSSEGRRNLY 105 (147)
T ss_dssp HHHHHHHHHHHHTT-SCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEC------CCEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-CCCCHHHHHHHhCCChhhHHHHHHHHHHCCCEeeCCCCCCCCceeeEECHHHHHHHH
Confidence 445667788876 4 6899999999 7788884421 1 23789998875543
No 348
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=55.94 E-value=20 Score=25.87 Aligned_cols=53 Identities=15% Similarity=0.070 Sum_probs=37.6
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc-CCCCeEEEEccC
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES-DLVNLKYVGGDM 196 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~-~~~ri~~~~gD~ 196 (209)
....--+.||||.=..-.+.++|++|+.+.--+.....+++ ...+|=.+.+.+
T Consensus 57 ~~d~GIliCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~hNnaNVl~lG~rv 110 (149)
T 3he8_A 57 ECDRGIVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERV 110 (149)
T ss_dssp SSSEEEEEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHTTCCSEEEEETTT
T ss_pred CCCEEEEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccc
Confidence 33445688999999999999999999876666777777774 233444444443
No 349
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=55.57 E-value=16 Score=29.11 Aligned_cols=31 Identities=29% Similarity=0.449 Sum_probs=26.9
Q ss_pred CeEEEecCCccHHHHH--HHHHCCCCeEEEeec
Q 046346 145 NSLVDVGGGTGTAAKA--IAKAFPKLECTCFDL 175 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~--l~~~~P~l~~~~~Dl 175 (209)
.-|+-||+|++-++.+ ++++.++++++++|.
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk 98 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIES 98 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 4699999999998877 666789999999996
No 350
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=55.56 E-value=39 Score=21.80 Aligned_cols=60 Identities=20% Similarity=0.160 Sum_probs=36.3
Q ss_pred CeEEEecCCccHHHHHHHH---HCCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCCC------CCCCcEEEe
Q 046346 145 NSLVDVGGGTGTAAKAIAK---AFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFKA------ISPADAVVL 208 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~l~~---~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~~------~p~~D~~~l 208 (209)
.+++-+|+ |.++..+++ +....+++++|+ ++..+... ..++++..+|+.++ +..+|+++.
T Consensus 6 ~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d~vi~ 75 (118)
T 3ic5_A 6 WNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN--RMGVATKQVDAKDEAGLAKALGGFDAVIS 75 (118)
T ss_dssp EEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH--TTTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred CeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH--hCCCcEEEecCCCHHHHHHHHcCCCEEEE
Confidence 56788877 555554433 344467888998 44444333 35677788888652 234777763
No 351
>3g3z_A NMB1585, transcriptional regulator, MARR family; transcription factor, structur genomics, oxford protein production facility; 2.10A {Neisseria meningitidis serogroup B}
Probab=55.37 E-value=6.2 Score=27.37 Aligned_cols=47 Identities=13% Similarity=0.085 Sum_probs=33.5
Q ss_pred HHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCC----CCC---ceecCHhhhhhhc
Q 046346 36 IQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNND----EEQ---GYVLTNASKLLLK 83 (209)
Q Consensus 36 ~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~----~~~---~y~~t~~s~~l~~ 83 (209)
.++.++..|... +++|..+||+ |...|+++. .+. .+.+|+.|+.+..
T Consensus 32 ~q~~iL~~l~~~-~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~LT~~G~~~~~ 100 (145)
T 3g3z_A 32 NLFAVLYTLATE-GSRTQKHIGEKWSLPKQTVSGVCKTLAGQGLIEWQEGEQDRRKRLLSLTETGKAYAA 100 (145)
T ss_dssp HHHHHHHHHHHH-CSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEECCCSSCGGGSCEEECHHHHHHHH
T ss_pred HHHHHHHHHHHC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeeccCCCCCceeeeeEChhHHHHHH
Confidence 455677778665 5899999999 778898442 122 4889999976553
No 352
>2wte_A CSA3; antiviral protein, viral resistance, winged helix-turn-helix prnai nucleotide-binding domain; HET: MSE; 1.80A {Sulfolobus solfataricus}
Probab=55.36 E-value=7 Score=30.58 Aligned_cols=46 Identities=15% Similarity=0.218 Sum_probs=33.8
Q ss_pred HHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCC--CCCceecCHhhhhhh
Q 046346 36 IQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNND--EEQGYVLTNASKLLL 82 (209)
Q Consensus 36 ~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~--~~~~y~~t~~s~~l~ 82 (209)
.++.|+..|..+ +++|..|||+ |...|+++. ....|.+|+.+..+.
T Consensus 153 ~~~~IL~~L~~~-~~~s~~eLA~~lglsksTv~r~L~~Le~~GlV~r~~r~~~~~LT~~G~~l~ 215 (244)
T 2wte_A 153 EEMKLLNVLYET-KGTGITELAKMLDKSEKTLINKIAELKKFGILTQKGKDRKVELNELGLNVI 215 (244)
T ss_dssp HHHHHHHHHHHH-TCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTTTEEEECHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEeCCccEEEECHHHHHHH
Confidence 344566666554 6899999998 778898543 456799999997654
No 353
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=55.12 E-value=20 Score=26.31 Aligned_cols=53 Identities=17% Similarity=0.175 Sum_probs=37.6
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc-CCCCeEEEEcc
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES-DLVNLKYVGGD 195 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~-~~~ri~~~~gD 195 (209)
+....--+.||||.=..-.+.++|++|+.+.--+.....+++ ...+|=.+.+.
T Consensus 77 g~~d~GIliCGTGiG~sIaANKv~GIRAAlc~d~~sA~laR~hNnANVL~lG~R 130 (166)
T 3s5p_A 77 GRADCCILVCGTGIGISIAANKMKGIRCALCSTEYDAEMARKHNNANALALGGR 130 (166)
T ss_dssp TSCSEEEEEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHTTCCCEEEEETT
T ss_pred CCCcEEEEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEccc
Confidence 334446688999999999999999999876666777777774 23344444443
No 354
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=54.98 E-value=18 Score=26.35 Aligned_cols=54 Identities=15% Similarity=0.159 Sum_probs=38.9
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc-CCCCeEEEEccC
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES-DLVNLKYVGGDM 196 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~-~~~ri~~~~gD~ 196 (209)
+....--+.||||.=..-.+.++|++|+.+.--+.....+++ ...+|=.+.+.+
T Consensus 68 g~~d~GIliCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~hNnANVL~lG~rv 122 (155)
T 1o1x_A 68 NEADFGILLCGTGLGMSIAANRYRGIRAALCLFPDMARLARSHNNANILVLPGRL 122 (155)
T ss_dssp TSCSEEEEEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHHTTCCSEEEEETTT
T ss_pred CCCceEEEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHcCCCcEEEECCcc
Confidence 344456788999999999999999999876666777777774 334444444443
No 355
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=54.51 E-value=17 Score=26.26 Aligned_cols=52 Identities=17% Similarity=0.100 Sum_probs=37.1
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc-CCCCeEEEEc
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES-DLVNLKYVGG 194 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~-~~~ri~~~~g 194 (209)
+....--+.||||.=..-.+.++|++|+.+.--+.....+++ ...+|=.+.+
T Consensus 57 g~~d~GIliCGTGiG~siaANKv~GIRAal~~d~~sA~~ar~hNnaNVl~lG~ 109 (149)
T 2vvr_A 57 GEVDGGILICGTGVGISIAANKFAGIRAVVCSEPYSAQLSRQNNDTNVLAFGS 109 (149)
T ss_dssp TSSSEEEEEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHHHCCCEEEEET
T ss_pred CCCceEEEEeCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEECc
Confidence 344556788999999999999999999866666777776664 2334433343
No 356
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=54.10 E-value=26 Score=29.45 Aligned_cols=61 Identities=16% Similarity=0.276 Sum_probs=39.4
Q ss_pred CeEEEecCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCCC-------CCCCcEEEe
Q 046346 145 NSLVDVGGGT-GTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFKA-------ISPADAVVL 208 (209)
Q Consensus 145 ~~vlDvGgG~-G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~~-------~p~~D~~~l 208 (209)
.+|+-+|+|. |......+.+ -+..++++|. |+.++.++. ..+.++.||..++ +..+|++++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~-~g~~vvvId~d~~~v~~~~~--~g~~vi~GDat~~~~L~~agi~~A~~viv 74 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLS-SGVKMVVLDHDPDHIETLRK--FGMKVFYGDATRMDLLESAGAAKAEVLIN 74 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-TTCCEEEEECCHHHHHHHHH--TTCCCEESCTTCHHHHHHTTTTTCSEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHHh--CCCeEEEcCCCCHHHHHhcCCCccCEEEE
Confidence 5688888865 3333333333 3568999998 677777663 3456788998762 234787764
No 357
>3pqk_A Biofilm growth-associated repressor; helix-turn-helix motif, winged-helix fold, transcriptional R DNA binding, transcription; 2.09A {Xylella fastidiosa} PDB: 3pqj_A
Probab=53.77 E-value=9.2 Score=25.00 Aligned_cols=47 Identities=26% Similarity=0.277 Sum_probs=31.3
Q ss_pred HHHHHHHHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCC--C--CCCceecCHh
Q 046346 29 SMTLKCSIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNN--D--EEQGYVLTNA 77 (209)
Q Consensus 29 ~~~l~~a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e--~--~~~~y~~t~~ 77 (209)
..+|.--.++.|+..|.. +|.|+.|||+ |...|+++ + ..-.|.+|+.
T Consensus 17 ~~~l~~~~r~~Il~~L~~--~~~~~~ela~~l~is~~tvs~~L~~L~~~Glv~~~~~g~~~~y~l~~~ 82 (102)
T 3pqk_A 17 LKTLSHPVRLMLVCTLVE--GEFSVGELEQQIGIGQPTLSQQLGVLRESGIVETRRNIKQIFYRLTEA 82 (102)
T ss_dssp HHHHCSHHHHHHHHHHHT--CCBCHHHHHHHHTCCTTHHHHHHHHHHHTTSEEEECSSSCCEEEECSS
T ss_pred HHHcCCHHHHHHHHHHHh--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEeCCEEEEEECcH
Confidence 344445566677788865 6899999999 67788743 1 1234777764
No 358
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=53.66 E-value=15 Score=29.60 Aligned_cols=62 Identities=16% Similarity=0.172 Sum_probs=37.7
Q ss_pred CeEEEecCCccHHHHHHHHHC----CCCeEEEeechHH--------Hhh----cccCCCCeEEEEccCCCC-------CC
Q 046346 145 NSLVDVGGGTGTAAKAIAKAF----PKLECTCFDLPHV--------VNG----LESDLVNLKYVGGDMFKA-------IS 201 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~l~~~~----P~l~~~~~Dlp~v--------~~~----a~~~~~ri~~~~gD~~~~-------~p 201 (209)
.+||-. ||+|.++..++++. .+.+++++|+... .+. ......+++++.+|+.++ ..
T Consensus 11 ~~vlVT-GatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 89 (362)
T 3sxp_A 11 QTILIT-GGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKL 89 (362)
T ss_dssp CEEEEE-TTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTS
T ss_pred CEEEEE-CCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhcc
Confidence 455544 56777777666554 6789999997321 110 011245789999999862 22
Q ss_pred CCcEEE
Q 046346 202 PADAVV 207 (209)
Q Consensus 202 ~~D~~~ 207 (209)
..|+++
T Consensus 90 ~~D~vi 95 (362)
T 3sxp_A 90 HFDYLF 95 (362)
T ss_dssp CCSEEE
T ss_pred CCCEEE
Confidence 367765
No 359
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=53.36 E-value=14 Score=31.07 Aligned_cols=30 Identities=27% Similarity=0.287 Sum_probs=25.0
Q ss_pred eEEEecCCccHHHHH--HHHHCCCCeEEEeec
Q 046346 146 SLVDVGGGTGTAAKA--IAKAFPKLECTCFDL 175 (209)
Q Consensus 146 ~vlDvGgG~G~~~~~--l~~~~P~l~~~~~Dl 175 (209)
+||-||||++-+..+ +++..++.+++++|.
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~ 33 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEK 33 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEES
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeC
Confidence 689999999977664 777889999999885
No 360
>2f2e_A PA1607; transcription factor, helix-TRUN-helix, APC5613, structural genomics, PSI, protein structure initiative; HET: GLC; 1.85A {Pseudomonas aeruginosa} SCOP: a.4.5.69
Probab=53.29 E-value=5.5 Score=28.35 Aligned_cols=55 Identities=22% Similarity=0.190 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCC------CCceecC
Q 046346 17 IHVWNHIFNFINSMTLKCSIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDE------EQGYVLT 75 (209)
Q Consensus 17 ~~l~~~~~g~~~~~~l~~a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~------~~~y~~t 75 (209)
...++++...|....|.. |.. ++.+..||++ |...|++++. .-.|.+|
T Consensus 15 ~~~l~~l~~~w~l~IL~~---------L~~--g~~~~~eLa~~lgis~~tls~~L~~Le~~GlI~r~~~~~d~~~~y~LT 83 (146)
T 2f2e_A 15 ARPLDVIGDGWSMLIVRD---------AFE--GLTRFGEFQKSLGLAKNILAARLRNLVEHGVMVAVPAESGSHQEYRLT 83 (146)
T ss_dssp TTTHHHHCSSSHHHHHHH---------HHT--TCCSHHHHHHHHCCCHHHHHHHHHHHHHTTSEEEEECSSSSCEEEEEC
T ss_pred HHHHHHhCCchHHHHHHH---------HHh--CCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEEecCCCCeEEEEEC
Confidence 344555555555544433 222 4677777776 7788984321 2368999
Q ss_pred Hhhhhhh
Q 046346 76 NASKLLL 82 (209)
Q Consensus 76 ~~s~~l~ 82 (209)
+.|+.+.
T Consensus 84 ~~G~~l~ 90 (146)
T 2f2e_A 84 DKGRALF 90 (146)
T ss_dssp HHHHTTH
T ss_pred chHHHHH
Confidence 9986543
No 361
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=53.28 E-value=26 Score=28.29 Aligned_cols=40 Identities=23% Similarity=0.360 Sum_probs=32.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhhcc
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL-PHVVNGLE 183 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~ 183 (209)
.....|||-=||+|+.+.+..+. +-+++++|+ |..++.++
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~--gr~~ig~e~~~~~~~~~~ 291 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKPEYVAASA 291 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCCEEEEeCCHHHHHHHH
Confidence 35679999999999999998887 578999999 55555555
No 362
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=53.20 E-value=32 Score=25.58 Aligned_cols=60 Identities=20% Similarity=0.323 Sum_probs=37.7
Q ss_pred eEEEecCCccHHHHHHHHHC--CCCeEEEeec-hHHHhhcccCCCCeEEEEccCCCC-------CCCCcEEEe
Q 046346 146 SLVDVGGGTGTAAKAIAKAF--PKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFKA-------ISPADAVVL 208 (209)
Q Consensus 146 ~vlDvGgG~G~~~~~l~~~~--P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~~-------~p~~D~~~l 208 (209)
+|+=+|+ |.++..+++.. -+.+++++|. ++.++...+ ...+.++.||..++ +..+|+++.
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~-~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 71 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAK-KLKATIIHGDGSHKEILRDAEVSKNDVVVI 71 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-HSSSEEEESCTTSHHHHHHHTCCTTCEEEE
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH-HcCCeEEEcCCCCHHHHHhcCcccCCEEEE
Confidence 3566775 66666665543 3567899998 555554321 13567899998762 344888764
No 363
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=53.04 E-value=18 Score=26.62 Aligned_cols=54 Identities=17% Similarity=0.109 Sum_probs=38.2
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc-CCCCeEEEEccC
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES-DLVNLKYVGGDM 196 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~-~~~ri~~~~gD~ 196 (209)
+....--+.||||.=..-.+.++|++|+.+.--+.....+++ ...+|=.+.+.+
T Consensus 76 g~~d~GIliCGTGiG~sIaANKv~GIRAAlc~d~~sA~~aR~hNnANVL~lG~Rv 130 (169)
T 3ph3_A 76 GECDRGIVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERV 130 (169)
T ss_dssp TSSSEEEEEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHHTTCCSEEEEETTT
T ss_pred CCCCEEEEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccc
Confidence 333446688999999999999999999876666777777774 234444444443
No 364
>3k0l_A Repressor protein; helix-turn-helix, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.35A {Acinetobacter SP}
Probab=52.69 E-value=6.5 Score=27.98 Aligned_cols=47 Identities=13% Similarity=0.106 Sum_probs=33.8
Q ss_pred HHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCC----CCC---ceecCHhhhhhhc
Q 046346 36 IQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNND----EEQ---GYVLTNASKLLLK 83 (209)
Q Consensus 36 ~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~----~~~---~y~~t~~s~~l~~ 83 (209)
.++.|+..|... +++|..+||+ |...|++++ .+. .+.+|+.|+.+..
T Consensus 47 ~q~~iL~~l~~~-~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~DrR~~~l~LT~~G~~~~~ 115 (162)
T 3k0l_A 47 PQFTALSVLAAK-PNLSNAKLAERSFIKPQSANKILQDLLANGWIEKAPDPTHGRRILVTVTPSGLDKLN 115 (162)
T ss_dssp HHHHHHHHHHHC-TTCCHHHHHHHHTSCGGGHHHHHHHHHHTTSEEEEECCSSSCCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCcCeEecCCCCcCCeeEeEECHhHHHHHH
Confidence 344577788776 6899999999 778898442 222 4789999976554
No 365
>3bro_A Transcriptional regulator; helix_TURN_helix, multiple antibiotic resistance protein (MA structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.04A {Oenococcus oeni} SCOP: a.4.5.28
Probab=52.66 E-value=5.8 Score=27.22 Aligned_cols=46 Identities=15% Similarity=0.167 Sum_probs=31.0
Q ss_pred HcCchhHhhhCCC-CCCHHHHHH---------------HHhCCCCCC----CCC---ceecCHhhhhhh
Q 046346 37 QLGIPDIINKHGK-PMTLNELQK---------------LVSSGNNND----EEQ---GYVLTNASKLLL 82 (209)
Q Consensus 37 ~lglfd~L~~~g~-~~t~~eLA~---------------L~~~g~~e~----~~~---~y~~t~~s~~l~ 82 (209)
++.++..|...++ ++|..+||+ |...|+++. .+. .+.+|+.|+.+.
T Consensus 36 ~~~iL~~l~~~~~~~~~~~ela~~l~~~~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~i~lT~~G~~~~ 104 (141)
T 3bro_A 36 QMTIIDYLSRNKNKEVLQRDLESEFSIKSSTATVLLQRMEIKKLLYRKVSGKDSRQKCLKLTKKANKLE 104 (141)
T ss_dssp HHHHHHHHHHTTTSCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEECHHHHTTH
T ss_pred HHHHHHHHHHCCCCCcCHHHHHHHHCCCcchHHHHHHHHHHCCCEEeeCCCcCCCeeeeEECHHHHHHH
Confidence 4446777776532 899999999 778887432 122 477899886554
No 366
>3bj6_A Transcriptional regulator, MARR family; helix-turn-helix, trasnscription regulator, STR genomics, PSI-2, protein structure initiative; 2.01A {Silicibacter pomeroyi dss-3}
Probab=52.46 E-value=5.4 Score=27.86 Aligned_cols=46 Identities=17% Similarity=0.175 Sum_probs=32.3
Q ss_pred HcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCC----C---CceecCHhhhhhhc
Q 046346 37 QLGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDE----E---QGYVLTNASKLLLK 83 (209)
Q Consensus 37 ~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~----~---~~y~~t~~s~~l~~ 83 (209)
++.++..|... +++|..+||+ |...|+++.. + -.+.+|+.|+.+..
T Consensus 42 ~~~iL~~l~~~-~~~t~~ela~~l~~~~~~vs~~l~~Le~~Glv~r~~~~~d~R~~~~~lT~~G~~~~~ 109 (152)
T 3bj6_A 42 QRAILEGLSLT-PGATAPQLGAALQMKRQYISRILQEVQRAGLIERRTNPEHARSHRYWLTPRGEAIIT 109 (152)
T ss_dssp HHHHHHHHHHS-TTEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCSSSTTSCEEEECHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCeeecCCcccccceeeEEChhhHHHHH
Confidence 44577777765 6899999999 7788984321 1 14789999875543
No 367
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=52.26 E-value=21 Score=27.40 Aligned_cols=53 Identities=19% Similarity=0.114 Sum_probs=38.1
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc-CCCCeEEEEc
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES-DLVNLKYVGG 194 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~-~~~ri~~~~g 194 (209)
++....--+.||||.-..-.+.++|++++.+.--+.....+++ ...+|=.+++
T Consensus 64 ~g~~d~GIliCGTGiG~siaANKv~GIRAAlc~d~~sA~laR~hNnANVL~lG~ 117 (214)
T 3ono_A 64 SKAVDFVVTGCGTGQGALMSCNLHPGVVCGYCLEPSDAFLFNQINNGNAISLAF 117 (214)
T ss_dssp TTSCSEEEEEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHHTCCSEEEEES
T ss_pred cCCCCEEEEEcCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHHcCCcEEEecC
Confidence 3444556789999999999999999999866666777777764 3334444443
No 368
>3bja_A Transcriptional regulator, MARR family, putative; NP_978771.1, putative MARR-like transcription regulator, MAR structural genomics; 2.38A {Bacillus cereus}
Probab=52.07 E-value=4.6 Score=27.67 Aligned_cols=47 Identities=19% Similarity=0.295 Sum_probs=32.1
Q ss_pred HHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCC----CCC---ceecCHhhhhhhc
Q 046346 36 IQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNND----EEQ---GYVLTNASKLLLK 83 (209)
Q Consensus 36 ~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~----~~~---~y~~t~~s~~l~~ 83 (209)
.++.++..|... ++.|..+||+ |...|+++. .++ .|.+|+.|+.+..
T Consensus 34 ~~~~iL~~l~~~-~~~~~~ela~~l~~~~~tvs~~l~~L~~~gli~r~~~~~d~r~~~~~lT~~G~~~~~ 102 (139)
T 3bja_A 34 VQFGVIQVLAKS-GKVSMSKLIENMGCVPSNMTTMIQRMKRDGYVMTEKNPNDQRETLVYLTKKGEETKK 102 (139)
T ss_dssp HHHHHHHHHHHS-CSEEHHHHHHHCSSCCTTHHHHHHHHHHTTSEEEEECSSCTTCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCcCHHHHHHHHCCChhHHHHHHHHHHHCCCeeeccCCCCCceeEEEECHHHHHHHH
Confidence 345567777765 6899999999 778887431 122 3789999875553
No 369
>2pex_A Transcriptional regulator OHRR; transcription regulator; 1.90A {Xanthomonas campestris} PDB: 2pfb_A
Probab=51.99 E-value=6.1 Score=27.70 Aligned_cols=47 Identities=15% Similarity=0.158 Sum_probs=32.8
Q ss_pred HHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCC----CC---ceecCHhhhhhhc
Q 046346 36 IQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDE----EQ---GYVLTNASKLLLK 83 (209)
Q Consensus 36 ~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~----~~---~y~~t~~s~~l~~ 83 (209)
.++.|+..|... +++|..+||+ |...|+++.. +. .+.+|+.|+.+..
T Consensus 48 ~~~~iL~~l~~~-~~~t~~ela~~l~~s~~tvs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~~ 116 (153)
T 2pex_A 48 PQYLVMLVLWET-DERSVSEIGERLYLDSATLTPLLKRLQAAGLVTRTRAASDERQVIIALTETGRALRS 116 (153)
T ss_dssp HHHHHHHHHHHS-CSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC-------CEEEECHHHHHGGG
T ss_pred HHHHHHHHHHhC-CCcCHHHHHHHhCCCcccHHHHHHHHHHCCCEeecCCcccCCeeEeeECHHHHHHHH
Confidence 345577777765 6899999999 7788884421 11 4789999876654
No 370
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=51.92 E-value=26 Score=25.80 Aligned_cols=58 Identities=19% Similarity=0.124 Sum_probs=34.8
Q ss_pred EEEecCCccHHHHHHHHHC--CCCeEEEeech-HHHhhcccCCCCeEEEEccCCCC----CCCCcEEE
Q 046346 147 LVDVGGGTGTAAKAIAKAF--PKLECTCFDLP-HVVNGLESDLVNLKYVGGDMFKA----ISPADAVV 207 (209)
Q Consensus 147 vlDvGgG~G~~~~~l~~~~--P~l~~~~~Dlp-~v~~~a~~~~~ri~~~~gD~~~~----~p~~D~~~ 207 (209)
|+-. ||+|.++..++++. -+.+++++++. .-.+.. ...+++++.+|+.++ +...|+++
T Consensus 3 ilVt-GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~d~vi 67 (224)
T 3h2s_A 3 IAVL-GATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR--LGATVATLVKEPLVLTEADLDSVDAVV 67 (224)
T ss_dssp EEEE-TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--TCTTSEEEECCGGGCCHHHHTTCSEEE
T ss_pred EEEE-cCCCHHHHHHHHHHHHCCCEEEEEEecccccccc--cCCCceEEecccccccHhhcccCCEEE
Confidence 4434 45676666655543 24678888883 332221 246899999999763 23367665
No 371
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=51.69 E-value=34 Score=26.70 Aligned_cols=54 Identities=15% Similarity=0.169 Sum_probs=31.4
Q ss_pred CCeEEEecCCccHHHHHHHHHC--CCCeEEEeech-HHHhh-cccCCCCeEEEEccCCC
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAF--PKLECTCFDLP-HVVNG-LESDLVNLKYVGGDMFK 198 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~--P~l~~~~~Dlp-~v~~~-a~~~~~ri~~~~gD~~~ 198 (209)
.+++|-.||+.| ++.++++++ .+.++++.|+. +..+. +++...++.++.+|+.+
T Consensus 29 gk~vlVTGas~g-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d 86 (277)
T 3gvc_A 29 GKVAIVTGAGAG-IGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSD 86 (277)
T ss_dssp TCEEEETTTTST-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTC
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCC
Confidence 456676666554 444433332 25688888883 22222 22245678888888875
No 372
>3bpv_A Transcriptional regulator; MARR, DNA binding, transcription factor, winged helix motif, DNA-binding; 1.40A {Methanobacterium thermoautotrophicum} PDB: 3bpx_A*
Probab=51.49 E-value=5.5 Score=27.24 Aligned_cols=47 Identities=19% Similarity=0.175 Sum_probs=32.5
Q ss_pred HHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCC----CCC---ceecCHhhhhhhc
Q 046346 36 IQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNND----EEQ---GYVLTNASKLLLK 83 (209)
Q Consensus 36 ~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~----~~~---~y~~t~~s~~l~~ 83 (209)
.++.++..|... ++.|..+||+ |...|+++. .++ .+.+|+.|+.+..
T Consensus 30 ~~~~iL~~l~~~-~~~~~~ela~~l~~s~~tvs~~l~~L~~~glv~~~~~~~d~R~~~~~lT~~G~~~~~ 98 (138)
T 3bpv_A 30 AQVACLLRIHRE-PGIKQDELATFFHVDKGTIARTLRRLEESGFIEREQDPENRRRYILEVTRRGEEIIP 98 (138)
T ss_dssp HHHHHHHHHHHS-TTCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHTHH
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeecCCCCceeEEeeECHhHHHHHH
Confidence 344567777765 6899999999 778898542 122 2789998875543
No 373
>1bja_A Transcription regulatory protein MOTA; activation domain, middle mode transcription, alpha helical structure, transcription regulation; 2.19A {Enterobacteria phage T4} SCOP: a.4.5.9 PDB: 1i1s_A
Probab=51.34 E-value=8.6 Score=25.55 Aligned_cols=46 Identities=20% Similarity=0.298 Sum_probs=32.2
Q ss_pred HcCchhHhhhCCCCCCHHHHHH----------------HHhCCCCCCCCCceecCHhhhhhhc
Q 046346 37 QLGIPDIINKHGKPMTLNELQK----------------LVSSGNNNDEEQGYVLTNASKLLLK 83 (209)
Q Consensus 37 ~lglfd~L~~~g~~~t~~eLA~----------------L~~~g~~e~~~~~y~~t~~s~~l~~ 83 (209)
++.|+-.|... ++.|+.+||+ |...|+++.+++-+.+|+.|+.+..
T Consensus 18 QfsiL~~L~~~-~~~t~~~Lae~~l~~drstvsrnl~~L~r~GlVe~~~~Dl~LT~~G~~~l~ 79 (95)
T 1bja_A 18 TATILITIAKK-DFITAAEVREVHPDLGNAVVNSNIGVLIKKGLVEKSGDGLIITGEAQDIIS 79 (95)
T ss_dssp HHHHHHHHHHS-TTBCHHHHHHTCTTSCHHHHHHHHHHHHTTTSEEEETTEEEECHHHHHHHH
T ss_pred HHHHHHHHHHC-CCCCHHHHHHHHhcccHHHHHHHHHHHHHCCCeecCCCCeeeCHhHHHHHH
Confidence 44566677776 5899999988 5667886533333899999876543
No 374
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=50.88 E-value=23 Score=27.49 Aligned_cols=52 Identities=23% Similarity=0.173 Sum_probs=37.4
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc-CCCCeEEEEc
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES-DLVNLKYVGG 194 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~-~~~ri~~~~g 194 (209)
+....--+.||||.-..-.+.++|++|+.+.--+.....+++ ...+|=.+.+
T Consensus 82 g~~d~GIliCGTGiG~sIAANKv~GIRAAlc~d~~sA~laR~HNnANVL~lGa 134 (231)
T 3c5y_A 82 GAADFVVTGCGTGMGSMLAANAMPGVFCGLVIDPTDAFLFGQINDGNAISMPY 134 (231)
T ss_dssp TSCSEEEEEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHHTCCSEEEEES
T ss_pred CCCCeEEEEcCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHhcCccEEEECC
Confidence 344556789999999999999999999866666777777764 2334433333
No 375
>1on2_A Transcriptional regulator MNTR; helix-turn-helix, DNA-binding protein, metalloregulatory protein; 1.61A {Bacillus subtilis} SCOP: a.4.5.24 a.76.1.1 PDB: 2ev0_A 1on1_A 2ev5_A 2ev6_A* 2f5c_A 2f5d_A 2f5e_A 2f5f_A 2hyf_A* 2hyg_D 3r60_A* 3r61_A*
Probab=50.83 E-value=11 Score=26.21 Aligned_cols=34 Identities=18% Similarity=0.119 Sum_probs=26.1
Q ss_pred CCCCHHHHHH---------------HHhCCCCCC-CCCceecCHhhhhhh
Q 046346 49 KPMTLNELQK---------------LVSSGNNND-EEQGYVLTNASKLLL 82 (209)
Q Consensus 49 ~~~t~~eLA~---------------L~~~g~~e~-~~~~y~~t~~s~~l~ 82 (209)
++.|..+||+ |...|+++. ....|.+|+.|..+.
T Consensus 21 ~~~~~~ela~~l~vs~~tvs~~l~~Le~~Glv~r~~~~~~~LT~~g~~~~ 70 (142)
T 1on2_A 21 GYARVSDIAEALAVHPSSVTKMVQKLDKDEYLIYEKYRGLVLTSKGKKIG 70 (142)
T ss_dssp SSCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEETTTEEEECHHHHHHH
T ss_pred CCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEeeCceEEEchhHHHHH
Confidence 5788899888 778898653 346799999986554
No 376
>3boq_A Transcriptional regulator, MARR family; MARR famil structural genomics, PSI-2, protein structure initiative; 2.39A {Silicibacter pomeroyi dss-3}
Probab=50.61 E-value=5.8 Score=28.01 Aligned_cols=47 Identities=15% Similarity=0.247 Sum_probs=31.8
Q ss_pred HcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCC----CC---ceecCHhhhhhhc
Q 046346 37 QLGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDE----EQ---GYVLTNASKLLLK 83 (209)
Q Consensus 37 ~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~----~~---~y~~t~~s~~l~~ 83 (209)
++.++..|...++++|..+||+ |...|+++.. ++ .+.+|+.|+.+..
T Consensus 49 ~~~iL~~L~~~~~~~~~~ela~~l~i~~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~~~lT~~G~~~~~ 117 (160)
T 3boq_A 49 KFDAMAQLARNPDGLSMGKLSGALKVTNGNVSGLVNRLIKDGMVVKAMSADDRRSFSAKLTDAGLTTFK 117 (160)
T ss_dssp HHHHHHHHHHCTTCEEHHHHHHHCSSCCSCHHHHHHHHHHHTSEEEC--------CEEEECHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCHHHHHHHHCCChhhHHHHHHHHHHCCCEEeecCCCCCCeEEEEEChhHHHHHH
Confidence 4557888842236899999999 7788884421 11 3789999876553
No 377
>2nnn_A Probable transcriptional regulator; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=50.26 E-value=4.6 Score=27.68 Aligned_cols=47 Identities=19% Similarity=0.174 Sum_probs=33.3
Q ss_pred HHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCC----CCC---ceecCHhhhhhhc
Q 046346 36 IQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNND----EEQ---GYVLTNASKLLLK 83 (209)
Q Consensus 36 ~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~----~~~---~y~~t~~s~~l~~ 83 (209)
.++.++..|... ++.|..+||+ |...|+++. .++ .|.+|+.|+.+..
T Consensus 39 ~~~~iL~~l~~~-~~~t~~ela~~l~~~~~tvs~~l~~L~~~glv~r~~~~~d~R~~~~~lT~~G~~~~~ 107 (140)
T 2nnn_A 39 TQWAALVRLGET-GPCPQNQLGRLTAMDAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAELE 107 (140)
T ss_dssp HHHHHHHHHHHH-SSBCHHHHHHHTTCCHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeeCCCCCCCeeeeEECHhHHHHHH
Confidence 456678888765 5899999999 778888442 112 3789998875543
No 378
>1xmk_A Double-stranded RNA-specific adenosine deaminase; winged helix-turn-helix, RNA editing, interferon, ADAR1, hydrolase; 0.97A {Homo sapiens} SCOP: a.4.5.19
Probab=49.84 E-value=12 Score=23.91 Aligned_cols=42 Identities=17% Similarity=0.146 Sum_probs=29.0
Q ss_pred HcCchhHhhhCCCCCCHHHHHH----------------HHhCCCCC---CCCCceecCHhhh
Q 046346 37 QLGIPDIINKHGKPMTLNELQK----------------LVSSGNNN---DEEQGYVLTNASK 79 (209)
Q Consensus 37 ~lglfd~L~~~g~~~t~~eLA~----------------L~~~g~~e---~~~~~y~~t~~s~ 79 (209)
+-.|.+.|... +|.|+.+||+ |...|+++ .+.-.|.+|+.++
T Consensus 13 ~~~IL~~Lk~~-g~~ta~eiA~~Lgit~~~aVr~hL~~Le~eGlV~~~~~gRP~w~LT~~g~ 73 (79)
T 1xmk_A 13 KEKICDYLFNV-SDSSALNLAKNIGLTKARDINAVLIDMERQGDVYRQGTTPPIWHLTDKKR 73 (79)
T ss_dssp HHHHHHHHHHT-CCEEHHHHHHHHCGGGHHHHHHHHHHHHHTTSEEEECSSSCEEEECHHHH
T ss_pred HHHHHHHHHHc-CCcCHHHHHHHcCCCcHHHHHHHHHHHHHCCCEEecCCCCCCeEeCHhHH
Confidence 44566777776 6899999998 45667643 1122799999875
No 379
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=49.10 E-value=29 Score=25.79 Aligned_cols=54 Identities=13% Similarity=0.079 Sum_probs=38.0
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc-CCCCeEEEEccC
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES-DLVNLKYVGGDM 196 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~-~~~ri~~~~gD~ 196 (209)
+....--+.||||.=..-.+.++|.+|+.+.--+.....+++ ...+|=.+.+.+
T Consensus 80 g~~d~GIliCGTGiG~sIaANKv~GIRAAlc~d~~sA~laR~HNnANVL~lG~Rv 134 (179)
T 3k7p_A 80 KEVEFGVLAAGSGIGMSIAANKVPGVRAALCHDHYTAAMSRIHNDANIVCVGERT 134 (179)
T ss_dssp TSSSEEEEEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHTTCCSEEEEETTT
T ss_pred CCCCEEEEEccCcHHHhhHhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccc
Confidence 334445688999999999999999999876666777777774 233444444433
No 380
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=49.06 E-value=20 Score=27.52 Aligned_cols=52 Identities=21% Similarity=0.167 Sum_probs=37.6
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc-CCCCeEEEE
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES-DLVNLKYVG 193 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~-~~~ri~~~~ 193 (209)
++....--+.||||.-..-.+.++|++|+.+.--+.....+++ ...+|=.+.
T Consensus 65 ~g~~d~GIliCGTGiG~sIAANKv~GIRAAlc~d~~sA~laR~HNnANVL~lG 117 (216)
T 2ppw_A 65 TKAVDFVVTGCGTGVGAMLALNSFPGVVCGLAVDPTDAYLYSQINGGNALSIP 117 (216)
T ss_dssp TTSCSEEEEEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHHHTCCSEEEEE
T ss_pred cCCCCeEEEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHhcCceEEEeC
Confidence 3445567789999999999999999999866666777777764 233443333
No 381
>3bdd_A Regulatory protein MARR; putative multiple antibiotic-resistance repressor, structura genomics, joint center for structural genomics, JCSG; 2.20A {Streptococcus suis}
Probab=48.96 E-value=6.4 Score=27.01 Aligned_cols=46 Identities=24% Similarity=0.166 Sum_probs=33.0
Q ss_pred HHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCC-------CCCceecCHhhhhhh
Q 046346 36 IQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNND-------EEQGYVLTNASKLLL 82 (209)
Q Consensus 36 ~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~-------~~~~y~~t~~s~~l~ 82 (209)
.++.++..|... ++.|..+||+ |...|+++. ..-.|.+|+.|+.+.
T Consensus 32 ~~~~iL~~l~~~-~~~~~~ela~~l~is~~~vs~~l~~L~~~gli~~~~~~~d~r~~~~~lT~~G~~~~ 99 (142)
T 3bdd_A 32 TRYSILQTLLKD-APLHQLALQERLQIDRAAVTRHLKLLEESGYIIRKRNPDNQREVLVWPTEQAREAL 99 (142)
T ss_dssp HHHHHHHHHHHH-CSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSSTTCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEecCCCCCCCeeEEEECHHHHHHH
Confidence 445577788765 6899999999 778887431 122489999998666
No 382
>2qww_A Transcriptional regulator, MARR family; YP_013417.1, multiple antibiotic-resistance repressor (MARR) structural genomics; HET: MSE; 2.07A {Listeria monocytogenes str}
Probab=48.37 E-value=8.5 Score=26.90 Aligned_cols=46 Identities=22% Similarity=0.287 Sum_probs=33.0
Q ss_pred HHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCC------CCC---ceecCHhhhhhh
Q 046346 36 IQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNND------EEQ---GYVLTNASKLLL 82 (209)
Q Consensus 36 ~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~------~~~---~y~~t~~s~~l~ 82 (209)
.++.++..|... +++|..+||+ |...|+++. .++ .+.+|+.|+.+.
T Consensus 42 ~~~~iL~~l~~~-~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~~~d~R~~~~~LT~~G~~~~ 111 (154)
T 2qww_A 42 QQLAMINVIYST-PGISVADLTKRLIITGSSAAANVDGLISLGLVVKLNKTIPNDSMDLTLKLSKKGEDLS 111 (154)
T ss_dssp HHHHHHHHHHHS-TTEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEESCC--CTTCTTCEEEECHHHHHHH
T ss_pred HHHHHHHHHHHC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEecCcCCCCCCceeEeEECHHHHHHH
Confidence 345577777775 6899999999 678888443 222 478999987554
No 383
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=48.29 E-value=40 Score=27.06 Aligned_cols=64 Identities=20% Similarity=0.174 Sum_probs=37.0
Q ss_pred CCeEEEecCCc--cHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCC-CCCCCcEEEe
Q 046346 144 LNSLVDVGGGT--GTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFK-AISPADAVVL 208 (209)
Q Consensus 144 ~~~vlDvGgG~--G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~-~~p~~D~~~l 208 (209)
..+|.=||+|. +.++..+++.....+++++|+ ++.++.+.+.. -+.-...|.-+ -...+|++++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G-~~~~~~~~~~~~~~~~aDvVil 100 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLG-IIDEGTTSIAKVEDFSPDFVML 100 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTT-SCSEEESCTTGGGGGCCSEEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCC-CcchhcCCHHHHhhccCCEEEE
Confidence 36889999764 344555666654448899998 55566555322 11112233333 3445888886
No 384
>1ub9_A Hypothetical protein PH1061; helix-turn-helix motif, winged helix motif, structural genom transcription; 2.05A {Pyrococcus horikoshii} SCOP: a.4.5.28
Probab=48.27 E-value=6.5 Score=25.29 Aligned_cols=49 Identities=18% Similarity=0.216 Sum_probs=33.1
Q ss_pred HHHHHHHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCC--C-----CCCceecCHhhh
Q 046346 30 MTLKCSIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNN--D-----EEQGYVLTNASK 79 (209)
Q Consensus 30 ~~l~~a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e--~-----~~~~y~~t~~s~ 79 (209)
.++..-.++.|+..|... ++.|..+||+ |...|+++ . ....|.+|+.+.
T Consensus 11 ~~l~~~~~~~iL~~L~~~-~~~~~~ela~~l~is~~tvs~~l~~L~~~gli~~~~~~~~~r~~~~~lt~~g~ 81 (100)
T 1ub9_A 11 HILGNPVRLGIMIFLLPR-RKAPFSQIQKVLDLTPGNLDSHIRVLERNGLVKTYKVIADRPRTVVEITDFGM 81 (100)
T ss_dssp HHHHSHHHHHHHHHHHHH-SEEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECHHHH
T ss_pred cccCChHHHHHHHHHHhc-CCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEecCCCcceEEEEECHHHH
Confidence 344555667777777644 5899999998 67788743 1 112588998874
No 385
>1jgs_A Multiple antibiotic resistance protein MARR; transcription regulation, DNA-binding, repressor, transcription; HET: SAL; 2.30A {Escherichia coli} SCOP: a.4.5.28
Probab=48.27 E-value=5.9 Score=27.11 Aligned_cols=46 Identities=24% Similarity=0.184 Sum_probs=31.4
Q ss_pred HcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCC----CCC---ceecCHhhhhhhc
Q 046346 37 QLGIPDIINKHGKPMTLNELQK---------------LVSSGNNND----EEQ---GYVLTNASKLLLK 83 (209)
Q Consensus 37 ~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~----~~~---~y~~t~~s~~l~~ 83 (209)
++.++..|... ++.|..+||+ |...|+++. .++ .+.+|+.|+.+..
T Consensus 36 ~~~iL~~l~~~-~~~~~~~la~~l~~~~~tvs~~l~~L~~~gli~r~~~~~d~R~~~~~lT~~G~~~~~ 103 (138)
T 1jgs_A 36 QFKVLCSIRCA-ACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTTGGAAICE 103 (138)
T ss_dssp HHHHHHHHHHH-SSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECTTCSSCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHhc-CCCCHHHHHHHHCCChHHHHHHHHHHHHCCCEEecCCcccCceeEeEEChhHHHHHH
Confidence 44466677664 5899999999 678887432 222 3789999875553
No 386
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=48.18 E-value=49 Score=25.33 Aligned_cols=59 Identities=8% Similarity=0.094 Sum_probs=39.1
Q ss_pred CeEEEecCCccHHHHHHHHHCC--CCeEEEeechH-HHhhcccCCCCeEEEEccCCC-CCCCCcEEE
Q 046346 145 NSLVDVGGGTGTAAKAIAKAFP--KLECTCFDLPH-VVNGLESDLVNLKYVGGDMFK-AISPADAVV 207 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~l~~~~P--~l~~~~~Dlp~-v~~~a~~~~~ri~~~~gD~~~-~~p~~D~~~ 207 (209)
.+|+-.| + |.++..++++.- +.+++++++.. -.+... ..+++++.+|+.+ ++..+|+++
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~~D~~d~~~~~~d~vi 68 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR--ASGAEPLLWPGEEPSLDGVTHLL 68 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH--HTTEEEEESSSSCCCCTTCCEEE
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh--hCCCeEEEecccccccCCCCEEE
Confidence 5788888 5 998888877752 45788888732 222111 3578999999865 233477765
No 387
>2fbk_A Transcriptional regulator, MARR family; winged-helix-turn-helix; 2.30A {Deinococcus radiodurans} SCOP: a.4.5.28
Probab=47.91 E-value=8.8 Score=27.90 Aligned_cols=47 Identities=17% Similarity=0.263 Sum_probs=31.8
Q ss_pred HcCchhHhhhCCCC--CCHHHHHH---------------HHhCCCCCCC----CC---ceecCHhhhhhhc
Q 046346 37 QLGIPDIINKHGKP--MTLNELQK---------------LVSSGNNNDE----EQ---GYVLTNASKLLLK 83 (209)
Q Consensus 37 ~lglfd~L~~~g~~--~t~~eLA~---------------L~~~g~~e~~----~~---~y~~t~~s~~l~~ 83 (209)
++.|+..|...++| +|..+||+ |...|+++.. +. .+.+|+.|+.+..
T Consensus 71 ~~~iL~~L~~~~~~~~~t~~eLa~~l~is~~tvs~~l~~Le~~GlV~r~~~~~DrR~~~~~LT~~G~~~~~ 141 (181)
T 2fbk_A 71 GWDLLLTLYRSAPPEGLRPTELSALAAISGPSTSNRIVRLLEKGLIERREDERDRRSASIRLTPQGRALVT 141 (181)
T ss_dssp HHHHHHHHHHHCCSSCBCHHHHHHHCSCCSGGGSSHHHHHHHHTSEECCC-------CCBEECHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCcCEEecCCCCCCCeeEEEECHHHHHHHH
Confidence 45577778765333 99999999 6778874422 11 4789999876553
No 388
>2fbh_A Transcriptional regulator PA3341; MARR, transcription regulator, APC5857, structural genomics, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=47.62 E-value=8.2 Score=26.55 Aligned_cols=46 Identities=24% Similarity=0.247 Sum_probs=31.0
Q ss_pred HcCchhHh-hhCCCCCCHHHHHH---------------HHhCCCCCC----CCC---ceecCHhhhhhhc
Q 046346 37 QLGIPDII-NKHGKPMTLNELQK---------------LVSSGNNND----EEQ---GYVLTNASKLLLK 83 (209)
Q Consensus 37 ~lglfd~L-~~~g~~~t~~eLA~---------------L~~~g~~e~----~~~---~y~~t~~s~~l~~ 83 (209)
++.++..| ... ++.|..+||+ |...|+++. .+. .+.+|+.|+.+..
T Consensus 39 ~~~iL~~l~~~~-~~~t~~~la~~l~~s~~~vs~~l~~L~~~glv~r~~~~~d~R~~~~~lT~~G~~~~~ 107 (146)
T 2fbh_A 39 RWLVLLHLARHR-DSPTQRELAQSVGVEGPTLARLLDGLESQGLVRRLAVAEDRRAKHIVLTPKADVLIA 107 (146)
T ss_dssp HHHHHHHHHHCS-SCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCBTTBCSCEEEECTTHHHHHH
T ss_pred HHHHHHHHHHcC-CCCCHHHHHHHhCCChhhHHHHHHHHHHCCCeeecCCCcccCeeeeEECHhHHHHHH
Confidence 34467777 443 7899999999 678887432 112 3788988875543
No 389
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=47.48 E-value=44 Score=26.00 Aligned_cols=63 Identities=14% Similarity=0.126 Sum_probs=36.3
Q ss_pred CeEEEecCCc--cHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCCCCCCCcEEEe
Q 046346 145 NSLVDVGGGT--GTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFKAISPADAVVL 208 (209)
Q Consensus 145 ~~vlDvGgG~--G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~~~p~~D~~~l 208 (209)
.+|.=||+|. +.++..+++..+..+++++|+ ++..+.+.+.. .+.....|.-+....+|++++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g-~~~~~~~~~~~~~~~aDvVil 72 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERG-IVDEATADFKVFAALADVIIL 72 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTT-SCSEEESCTTTTGGGCSEEEE
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcC-CcccccCCHHHhhcCCCEEEE
Confidence 5788898775 344555666665678999998 55555443221 111122343223345899886
No 390
>3jth_A Transcription activator HLYU; transcription factor, RTXA, DNA-binding, transcription regulation; 2.00A {Vibrio vulnificus}
Probab=47.19 E-value=27 Score=22.33 Aligned_cols=49 Identities=16% Similarity=0.190 Sum_probs=33.3
Q ss_pred HHHHHHHHHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCC-CC---CCceecCHhh
Q 046346 28 NSMTLKCSIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNN-DE---EQGYVLTNAS 78 (209)
Q Consensus 28 ~~~~l~~a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e-~~---~~~y~~t~~s 78 (209)
...+|.--.++.|+..|.. ++.|+.|||+ |...|+++ .. .-.|.+++..
T Consensus 16 ~~~~l~~~~r~~Il~~L~~--~~~~~~ela~~l~is~~tvs~~L~~L~~~Glv~~~~~g~~~~y~l~~~~ 83 (98)
T 3jth_A 16 LLKAMANERRLQILCMLHN--QELSVGELCAKLQLSQSALSQHLAWLRRDGLVTTRKEAQTVYYTLKSEE 83 (98)
T ss_dssp HHHHHCSHHHHHHHHHTTT--SCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCTTCCEEEECCHH
T ss_pred HHHHcCCHHHHHHHHHHhc--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEeCCEEEEEECHHH
Confidence 3345555667778888876 6999999999 67788843 12 2247777654
No 391
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=47.02 E-value=19 Score=29.37 Aligned_cols=31 Identities=16% Similarity=0.234 Sum_probs=25.3
Q ss_pred eEEEecCCccHHHHH--HHHHCCCCeEEEeech
Q 046346 146 SLVDVGGGTGTAAKA--IAKAFPKLECTCFDLP 176 (209)
Q Consensus 146 ~vlDvGgG~G~~~~~--l~~~~P~l~~~~~Dlp 176 (209)
.|+-||||.+-.+.+ |+++.|+.+++++|..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~ 34 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKN 34 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 588999999877765 5566789999999973
No 392
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=46.96 E-value=14 Score=27.17 Aligned_cols=30 Identities=20% Similarity=0.212 Sum_probs=24.8
Q ss_pred eEEEecCCccHHHHHHHHHCCCCeEEEeec
Q 046346 146 SLVDVGGGTGTAAKAIAKAFPKLECTCFDL 175 (209)
Q Consensus 146 ~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl 175 (209)
.|+-||+|..-++.++.-+--+++++++|.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEEC
Confidence 489999999988887655555889999996
No 393
>4hbl_A Transcriptional regulator, MARR family; HTH, transcription factor, DNA binding; 2.50A {Staphylococcus epidermidis}
Probab=46.92 E-value=6 Score=27.71 Aligned_cols=47 Identities=23% Similarity=0.221 Sum_probs=32.9
Q ss_pred HHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCC----CC---ceecCHhhhhhhc
Q 046346 36 IQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDE----EQ---GYVLTNASKLLLK 83 (209)
Q Consensus 36 ~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~----~~---~y~~t~~s~~l~~ 83 (209)
.++.++..|... +++|..+||+ |...|+++.. ++ .+.+|+.|+.+..
T Consensus 42 ~q~~iL~~l~~~-~~~~~~eLa~~l~~~~~~vs~~l~~L~~~Glv~r~~~~~D~R~~~~~LT~~G~~~~~ 110 (149)
T 4hbl_A 42 SQYLVMLTLWEE-NPQTLNSIGRHLDLSSNTLTPMLKRLEQSGWVKRERQQSDKRQLIITLTDNGQQQQE 110 (149)
T ss_dssp HHHHHHHHHHHS-SSEEHHHHHHHHTCCHHHHHHHHHHHHHHTSEEC---------CEEEECSHHHHHHH
T ss_pred HHHHHHHHHHHC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeeCCCCCCcceeeeeECHHHHHHHH
Confidence 455577777765 6899999999 7788984422 22 4789999976653
No 394
>2hzt_A Putative HTH-type transcriptional regulator YTCD; DNA-binding protein, HTH-type transcription regulators, structural genomics, PSI-2; HET: CSU MSE; 2.00A {Bacillus subtilis} SCOP: a.4.5.69
Probab=46.91 E-value=6.1 Score=26.37 Aligned_cols=56 Identities=18% Similarity=0.135 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCchhHhhhCCCCCCHHHHHH----------------HHhCCCCCC----CC---Cce
Q 046346 16 QIHVWNHIFNFINSMTLKCSIQLGIPDIINKHGKPMTLNELQK----------------LVSSGNNND----EE---QGY 72 (209)
Q Consensus 16 ~~~l~~~~~g~~~~~~l~~a~~lglfd~L~~~g~~~t~~eLA~----------------L~~~g~~e~----~~---~~y 72 (209)
...+++++.+.|....|.. |.. ++.+..||++ |...|++++ .+ -.|
T Consensus 4 ~~~~l~~l~~~~~~~IL~~---------L~~--~~~~~~eLa~~l~~is~~tls~~L~~Le~~GlI~r~~~~~d~r~~~y 72 (107)
T 2hzt_A 4 VEATLEVIGGKWKXVILXH---------LTH--GKKRTSELKRLMPNITQKMLTQQLRELEADGVINRIVYNQVPPKVEY 72 (107)
T ss_dssp HHHHHHHHCSTTHHHHHHH---------HTT--CCBCHHHHHHHCTTSCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEE
T ss_pred HHHHHHHHcCccHHHHHHH---------HHh--CCCCHHHHHHHhcCCCHHHHHHHHHHHHHCCCEEEeecCCCCCeEEE
Confidence 3445555555555554433 221 4555555555 778888431 11 258
Q ss_pred ecCHhhhhhh
Q 046346 73 VLTNASKLLL 82 (209)
Q Consensus 73 ~~t~~s~~l~ 82 (209)
.+|+.|+.+.
T Consensus 73 ~LT~~G~~l~ 82 (107)
T 2hzt_A 73 ELSEYGRSLE 82 (107)
T ss_dssp EECTTGGGGH
T ss_pred EECccHHHHH
Confidence 9999886544
No 395
>2bv6_A MGRA, HTH-type transcriptional regulator MGRA; multidrug resistance regulator, virulence determinant, transcriptional factors; 2.8A {Staphylococcus aureus} SCOP: a.4.5.28
Probab=46.43 E-value=5 Score=27.73 Aligned_cols=47 Identities=17% Similarity=0.165 Sum_probs=32.1
Q ss_pred HHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCC----CC---ceecCHhhhhhhc
Q 046346 36 IQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDE----EQ---GYVLTNASKLLLK 83 (209)
Q Consensus 36 ~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~----~~---~y~~t~~s~~l~~ 83 (209)
.++.++..|... +++|..+||+ |...|+++.. ++ .+.+|+.|+.+..
T Consensus 38 ~~~~iL~~l~~~-~~~~~~ela~~l~~~~~tvs~~l~~L~~~gli~r~~~~~d~R~~~~~lT~~G~~~~~ 106 (142)
T 2bv6_A 38 PQFLVLTILWDE-SPVNVKKVVTELALDTGTVSPLLKRMEQVDLIKRERSEVDQREVFIHLTDKSETIRP 106 (142)
T ss_dssp HHHHHHHHHHHS-SEEEHHHHHHHTTCCTTTHHHHHHHHHHTTSEEEEECSSSTTCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCcCHHHHHHHHCCChhhHHHHHHHHHHCCCEEeecCCCCcceEEEEEChHHHHHHH
Confidence 455577777765 5899999998 7788874321 12 4788998875543
No 396
>2a61_A Transcriptional regulator TM0710; APC4350, MCSG, midwest center for structural genomics, PSI, protein structure initiative, MARR; 1.80A {Thermotoga maritima} SCOP: a.4.5.28
Probab=46.41 E-value=5.8 Score=27.40 Aligned_cols=47 Identities=21% Similarity=0.225 Sum_probs=32.8
Q ss_pred HHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCC----CC---ceecCHhhhhhhc
Q 046346 36 IQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDE----EQ---GYVLTNASKLLLK 83 (209)
Q Consensus 36 ~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~----~~---~y~~t~~s~~l~~ 83 (209)
.++.++..|... ++.|..+||+ |...|+++.. ++ .|.+|+.|+.+..
T Consensus 34 ~~~~iL~~l~~~-~~~~~~~la~~l~~s~~tvs~~l~~L~~~glv~r~~~~~d~r~~~~~lT~~G~~~~~ 102 (145)
T 2a61_A 34 AQFDILQKIYFE-GPKRPGELSVLLGVAKSTVTGLVKRLEADGYLTRTPDPADRRAYFLVITRKGEEVIE 102 (145)
T ss_dssp HHHHHHHHHHHH-CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCCCchhHHHHHHHHHHCCCeeecCCCCCCceEEEEECHHHHHHHH
Confidence 355577777664 6899999999 7788884421 22 4789999876553
No 397
>3f6v_A Possible transcriptional regulator, ARSR family protein; probable transcriptional repressor ARSR family, structural genomics, PSI-2; 1.48A {Rhodococcus SP}
Probab=46.37 E-value=4.6 Score=29.08 Aligned_cols=50 Identities=14% Similarity=0.141 Sum_probs=37.3
Q ss_pred HHHHHHHHHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCC-CCCC---ceecCHhhh
Q 046346 28 NSMTLKCSIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNN-DEEQ---GYVLTNASK 79 (209)
Q Consensus 28 ~~~~l~~a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e-~~~~---~y~~t~~s~ 79 (209)
...+|.--.++.|+..|.. +++|+.+||+ |...|+++ ...| .|.+|+.+.
T Consensus 51 ~l~aL~~p~R~~IL~~L~~--~~~t~~eLa~~lgls~stvs~hL~~L~~aGlV~~~~~Gr~~~y~lt~~~~ 119 (151)
T 3f6v_A 51 QLEVAAEPTRRRLVQLLTS--GEQTVNNLAAHFPASRSAISQHLRVLTEAGLVTPRKDGRFRYYRLDPQGL 119 (151)
T ss_dssp HHHHHTSHHHHHHHHHGGG--CCEEHHHHHTTSSSCHHHHHHHHHHHHHTTSEEEEEETTEEEEEECHHHH
T ss_pred HHHHhCCHHHHHHHHHHHh--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEecCCEEEEEEChHHH
Confidence 4666777788889999985 7999999999 67888854 2223 488888763
No 398
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=46.31 E-value=34 Score=25.55 Aligned_cols=51 Identities=14% Similarity=0.041 Sum_probs=36.4
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc-CCCCeEEEEcc
Q 046346 145 NSLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES-DLVNLKYVGGD 195 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~-~~~ri~~~~gD 195 (209)
...--+-||||.=..-.+.++|++|+.+.--+.....+++ ...+|=.+.+.
T Consensus 90 ~d~GIliCGTGiG~sIaANKv~GIRAAlc~d~~sA~laR~HNnANVL~lG~R 141 (184)
T 3sgw_A 90 VDRALMICGTGLGVAISANKVPGIRAVTAHDTFSVERAILSNDAQVLCFGQR 141 (184)
T ss_dssp CSEEEEEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHTTCCSEEEEETT
T ss_pred CcEEEEEcCCcHHHhhhhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEchh
Confidence 3445678999999999999999999876666777777774 23344444443
No 399
>3s2w_A Transcriptional regulator, MARR family; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 2.45A {Methanosarcina mazei}
Probab=46.19 E-value=5.7 Score=28.16 Aligned_cols=45 Identities=18% Similarity=0.183 Sum_probs=31.1
Q ss_pred cCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCC----CCC---ceecCHhhhhhhc
Q 046346 38 LGIPDIINKHGKPMTLNELQK---------------LVSSGNNND----EEQ---GYVLTNASKLLLK 83 (209)
Q Consensus 38 lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~----~~~---~y~~t~~s~~l~~ 83 (209)
+.++..|... +++|..+||+ |...|+++. .++ .+.+|+.|+.+..
T Consensus 53 ~~vL~~l~~~-~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~DrR~~~l~LT~~G~~~~~ 119 (159)
T 3s2w_A 53 FPFLMRLYRE-DGINQESLSDYLKIDKGTTARAIQKLVDEGYVFRQRDEKDRRSYRVFLTEKGKKLEP 119 (159)
T ss_dssp HHHHHHHHHS-CSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECC---CCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecCCCCCCeeEEEECHHHHHHHH
Confidence 3456677665 6899999999 778898442 122 4789999976554
No 400
>2oqg_A Possible transcriptional regulator, ARSR family P; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 1.54A {Rhodococcus SP}
Probab=46.18 E-value=5.5 Score=26.53 Aligned_cols=43 Identities=14% Similarity=0.115 Sum_probs=28.9
Q ss_pred HHHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCC-CCCc---eecCHhh
Q 046346 34 CSIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNND-EEQG---YVLTNAS 78 (209)
Q Consensus 34 ~a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~-~~~~---y~~t~~s 78 (209)
.-.++.|+..|.. ++.|+.+||+ |...|+++. ..++ |.+|+.+
T Consensus 20 ~~~r~~IL~~L~~--~~~~~~ela~~l~is~~tv~~~l~~L~~~gli~~~~~gr~~~y~l~~~~ 81 (114)
T 2oqg_A 20 DETRWEILTELGR--ADQSASSLATRLPVSRQAIAKHLNALQACGLVESVKVGREIRYRALGAE 81 (114)
T ss_dssp CHHHHHHHHHHHH--SCBCHHHHHHHSSSCHHHHHHHHHHHHHTTSEEEEEETTEEEEEECSHH
T ss_pred ChHHHHHHHHHHc--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeeEEecCCEEEEEechHH
Confidence 3456667777843 6899999999 667787442 1233 7777765
No 401
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=46.12 E-value=23 Score=25.49 Aligned_cols=50 Identities=14% Similarity=0.092 Sum_probs=35.4
Q ss_pred eEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhhccc-CCCCeEEEEcc
Q 046346 146 SLVDVGGGTGTAAKAIAKAFPKLECTCFDLPHVVNGLES-DLVNLKYVGGD 195 (209)
Q Consensus 146 ~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp~v~~~a~~-~~~ri~~~~gD 195 (209)
..--+.||||.=..-.+.++|++|+.+.--+.....+++ ...+|=.+.+.
T Consensus 65 d~GIliCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~hNnANVL~lG~r 115 (148)
T 4em8_A 65 SFGVLICGTGIGMSIAANRHKNIRAALCSSTMLAKLSREHNDANVLCFGSR 115 (148)
T ss_dssp BEEEEEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHHHHCCCEEEEETT
T ss_pred CeEEEEccCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEchh
Confidence 335678999999999999999999876666777777664 23344333433
No 402
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=46.03 E-value=25 Score=28.31 Aligned_cols=52 Identities=15% Similarity=0.279 Sum_probs=34.1
Q ss_pred CCeEEEecCCccHHHHHHHHHC---CCCeEEEeechH-HHhhcccCCCCeEEEEccCC
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAF---PKLECTCFDLPH-VVNGLESDLVNLKYVGGDMF 197 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~---P~l~~~~~Dlp~-v~~~a~~~~~ri~~~~gD~~ 197 (209)
..+||-. ||+|.++..++++. ++.+++++++.. -..... ...+++++.+|+.
T Consensus 24 ~~~vlVt-GatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-~~~~v~~~~~Dl~ 79 (372)
T 3slg_A 24 AKKVLIL-GVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV-KHERMHFFEGDIT 79 (372)
T ss_dssp CCEEEEE-SCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG-GSTTEEEEECCTT
T ss_pred CCEEEEE-CCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc-cCCCeEEEeCccC
Confidence 3566644 56677777666654 577899999832 221111 2468999999998
No 403
>3deu_A Transcriptional regulator SLYA; MARR, WING-helix, transcription regulator, activator, DNA-binding, repressor; HET: SAL; 2.30A {Salmonella typhimurium} SCOP: a.4.5.28
Probab=45.94 E-value=9.1 Score=27.49 Aligned_cols=49 Identities=16% Similarity=0.126 Sum_probs=33.5
Q ss_pred HHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCC----C---CceecCHhhhhhhc
Q 046346 35 SIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDE----E---QGYVLTNASKLLLK 83 (209)
Q Consensus 35 a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~----~---~~y~~t~~s~~l~~ 83 (209)
..++.|+..|...++++|..+||+ |...|++++. + -.+.+|+.|+.+..
T Consensus 53 ~~q~~vL~~L~~~~~~~t~~eLa~~l~i~~~tvs~~l~~Le~~GlV~r~~~~~DrR~~~l~LT~~G~~~~~ 123 (166)
T 3deu_A 53 QTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEDKGLISRQTCASDRRAKRIKLTEKAEPLIA 123 (166)
T ss_dssp HHHHHHHHHHHHSCSSEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEC--------CEEEECGGGHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHCCCHhhHHHHHHHHHHCCCEEeeCCCCCCCeeEEEECHHHHHHHH
Confidence 345557777776336799999999 7788984422 2 24789998876553
No 404
>1qgp_A Protein (double stranded RNA adenosine deaminase); Z-alpha-Z-DNA binding domain, RNA-editing, Z-DNA recognition, ADAR1, helix- turn-helix; NMR {Homo sapiens} SCOP: a.4.5.19
Probab=45.83 E-value=6 Score=24.99 Aligned_cols=40 Identities=18% Similarity=0.260 Sum_probs=26.3
Q ss_pred HcCchhHhhhCC--CCCCHHHHHH---------------HHhCCCCC---CCCCceecCH
Q 046346 37 QLGIPDIINKHG--KPMTLNELQK---------------LVSSGNNN---DEEQGYVLTN 76 (209)
Q Consensus 37 ~lglfd~L~~~g--~~~t~~eLA~---------------L~~~g~~e---~~~~~y~~t~ 76 (209)
+..|++.|..++ .++|+.|||+ |...|+++ ..++.|..++
T Consensus 16 ~~~IL~~L~~~~~~~~~t~~eLA~~Lgvs~~tV~~~L~~L~~~G~I~~~g~~~~~W~i~~ 75 (77)
T 1qgp_A 16 EQRILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEAGTPPLWKIAV 75 (77)
T ss_dssp HHHHHHHHHHHCSSSCEEHHHHHHHHCCCHHHHHHHHHHHHHHTSEEEECSSSCEEEECC
T ss_pred HHHHHHHHHHcCCCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEecCCCCCceEecC
Confidence 556777777752 3799999999 55667632 3346666553
No 405
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=45.79 E-value=20 Score=30.64 Aligned_cols=33 Identities=24% Similarity=0.234 Sum_probs=28.4
Q ss_pred CCeEEEecCCccHHHHH--HHHHCCCCeEEEeech
Q 046346 144 LNSLVDVGGGTGTAAKA--IAKAFPKLECTCFDLP 176 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~--l~~~~P~l~~~~~Dlp 176 (209)
...||-||||.+-++.+ |.++.++.+++++|..
T Consensus 11 ~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~ 45 (493)
T 1m6i_A 11 HVPFLLIGGGTAAFAAARSIRARDPGARVLIVSED 45 (493)
T ss_dssp EEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESS
T ss_pred cCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence 45799999999998887 7888899999999963
No 406
>2rdp_A Putative transcriptional regulator MARR; PFAM PF01047, winged-helix binding motif, structural genomics, PSI-2; 2.30A {Geobacillus stearothermophilus}
Probab=45.38 E-value=7.2 Score=27.12 Aligned_cols=46 Identities=13% Similarity=0.189 Sum_probs=31.3
Q ss_pred HcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCC----CCC---ceecCHhhhhhhc
Q 046346 37 QLGIPDIINKHGKPMTLNELQK---------------LVSSGNNND----EEQ---GYVLTNASKLLLK 83 (209)
Q Consensus 37 ~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~----~~~---~y~~t~~s~~l~~ 83 (209)
++.++..|... +++|..+||+ |...|+++. .++ .+.+|+.|+.+..
T Consensus 44 ~~~iL~~l~~~-~~~t~~ela~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~d~R~~~~~lT~~G~~~~~ 111 (150)
T 2rdp_A 44 QFVALQWLLEE-GDLTVGELSNKMYLACSTTTDLVDRMERNGLVARVRDEHDRRVVRIRLLEKGERIIE 111 (150)
T ss_dssp HHHHHHHHHHH-CSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECCC---CEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCCCchhHHHHHHHHHHCCCeeecCCCCCcceeEeEECHhHHHHHH
Confidence 44466777765 6899999999 678887432 122 3789999876553
No 407
>3cjn_A Transcriptional regulator, MARR family; silicibacter pomeroy structural genomics, PSI-2, protein structure initiative; 1.95A {Silicibacter pomeroyi dss-3}
Probab=45.18 E-value=6.6 Score=27.82 Aligned_cols=47 Identities=15% Similarity=0.235 Sum_probs=33.0
Q ss_pred HHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCC----CC---CceecCHhhhhhhc
Q 046346 36 IQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNND----EE---QGYVLTNASKLLLK 83 (209)
Q Consensus 36 ~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~----~~---~~y~~t~~s~~l~~ 83 (209)
.++.|+..|... +++|..+||+ |...|+++. .+ -.|.+|+.|+.+..
T Consensus 53 ~~~~iL~~l~~~-~~~t~~ela~~l~is~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~~~lT~~G~~~~~ 121 (162)
T 3cjn_A 53 AKMRALAILSAK-DGLPIGTLGIFAVVEQSTLSRALDGLQADGLVRREVDSDDQRSSRVYLTPAGRAVYD 121 (162)
T ss_dssp HHHHHHHHHHHS-CSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEC--CCSSEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHC-CCCCHHHHHHHHCCChhHHHHHHHHHHHCCCEEecCCCCCCCeeEEEECHHHHHHHH
Confidence 455578888775 6899999999 778888432 12 23789999875543
No 408
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=44.59 E-value=52 Score=22.01 Aligned_cols=61 Identities=20% Similarity=0.190 Sum_probs=34.4
Q ss_pred CCeEEEecCCccHHHHHHHHHC--CCCeEEEeec-hHHHhhcccCCCCeEEEEccCCCC-------CCCCcEEEe
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAF--PKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFKA-------ISPADAVVL 208 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~--P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~~-------~p~~D~~~l 208 (209)
..+++-+|+ |.++..+++.. -+.+++++|. ++..+.+++ ....++.+|..++ ...+|+++.
T Consensus 6 ~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~--~~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 76 (144)
T 2hmt_A 6 NKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS--YATHAVIANATEENELLSLGIRNFEYVIV 76 (144)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT--TCSEEEECCTTCHHHHHTTTGGGCSEEEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--hCCEEEEeCCCCHHHHHhcCCCCCCEEEE
Confidence 356888886 55555544432 2356788887 444444432 2345677776541 223787764
No 409
>1lj9_A Transcriptional regulator SLYA; HTH DNA binding protein, structural genomics, PSI, protein structure initiative; 1.60A {Enterococcus faecalis} SCOP: a.4.5.28
Probab=44.54 E-value=7 Score=26.94 Aligned_cols=46 Identities=11% Similarity=0.021 Sum_probs=31.6
Q ss_pred HcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCC----CCC---ceecCHhhhhhhc
Q 046346 37 QLGIPDIINKHGKPMTLNELQK---------------LVSSGNNND----EEQ---GYVLTNASKLLLK 83 (209)
Q Consensus 37 ~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~----~~~---~y~~t~~s~~l~~ 83 (209)
++.++..|... +++|..+||+ |...|+++. .+. .+.+|+.|+.+..
T Consensus 31 ~~~iL~~l~~~-~~~t~~~la~~l~~s~~~vs~~l~~Le~~gli~r~~~~~d~R~~~~~lT~~G~~~~~ 98 (144)
T 1lj9_A 31 QYLYLVRVCEN-PGIIQEKIAELIKVDRTTAARAIKRLEEQGFIYRQEDASNKKIKRIYATEKGKNVYP 98 (144)
T ss_dssp HHHHHHHHHHS-TTEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSCTTCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHC-cCcCHHHHHHHHCCCHhHHHHHHHHHHHCCCEEeecCCCCCceeeeEEChhHHHHHH
Confidence 34467777765 5899999999 678887431 122 3789999975553
No 410
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=43.72 E-value=37 Score=28.02 Aligned_cols=45 Identities=20% Similarity=0.144 Sum_probs=34.5
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhhcccC
Q 046346 141 FEGLNSLVDVGGGT-GTAAKAIAKAFPKLECTCFDL-PHVVNGLESD 185 (209)
Q Consensus 141 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~ 185 (209)
+....+||.+|+|. |.++..+++..--.++++.|. ++-.+.++++
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 229 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA 229 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc
Confidence 55678999999877 999999999875338999996 5666666643
No 411
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=43.69 E-value=48 Score=25.22 Aligned_cols=54 Identities=13% Similarity=0.067 Sum_probs=29.3
Q ss_pred CeEEEecCCccH---HHHHHHHHCCCCeEEEeech-HHHhhcc-cCCCCeEEEEccCCC
Q 046346 145 NSLVDVGGGTGT---AAKAIAKAFPKLECTCFDLP-HVVNGLE-SDLVNLKYVGGDMFK 198 (209)
Q Consensus 145 ~~vlDvGgG~G~---~~~~l~~~~P~l~~~~~Dlp-~v~~~a~-~~~~ri~~~~gD~~~ 198 (209)
+++|-.||+.|. ++..|+++..+.++++.++. +.++... +...++.++.+|+.+
T Consensus 3 k~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~ 61 (254)
T 3kzv_A 3 KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITE 61 (254)
T ss_dssp CEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTS
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCC
Confidence 345555555442 23344555556777777773 2232222 234577788888765
No 412
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=43.68 E-value=37 Score=26.75 Aligned_cols=48 Identities=15% Similarity=0.291 Sum_probs=31.4
Q ss_pred ecCCccHHHHHHHHHC---CCCeEEEeech-HHHhhcccCCCCeEEEEccCCC
Q 046346 150 VGGGTGTAAKAIAKAF---PKLECTCFDLP-HVVNGLESDLVNLKYVGGDMFK 198 (209)
Q Consensus 150 vGgG~G~~~~~l~~~~---P~l~~~~~Dlp-~v~~~a~~~~~ri~~~~gD~~~ 198 (209)
|=||+|.++..++++. ++.+++++++. .-.+... ...+++++.+|+.+
T Consensus 5 VtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~ 56 (345)
T 2bll_A 5 ILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-NHPHFHFVEGDISI 56 (345)
T ss_dssp EETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-TCTTEEEEECCTTT
T ss_pred EECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-cCCCeEEEeccccC
Confidence 3466788877776654 56788888883 2222111 24689999999976
No 413
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=43.18 E-value=50 Score=29.61 Aligned_cols=56 Identities=9% Similarity=-0.016 Sum_probs=44.3
Q ss_pred CCCeEEEecCCccHHHHHHHHHCC--------CCeEEEeechHHHhhccc-----------C------------------
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFP--------KLECTCFDLPHVVNGLES-----------D------------------ 185 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P--------~l~~~~~Dlp~v~~~a~~-----------~------------------ 185 (209)
+...||-+|||-=...-.|...+| +++++=+|+|++++.=++ .
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFLT 186 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCEE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHHHHHHHHcChHHHHhhcccccccccccccccccc
Confidence 468999999999999999988866 677788888988863211 0
Q ss_pred CCCeEEEEccCCC
Q 046346 186 LVNLKYVGGDMFK 198 (209)
Q Consensus 186 ~~ri~~~~gD~~~ 198 (209)
.++..+++.|+.+
T Consensus 187 s~~y~~v~~Dl~~ 199 (695)
T 2zwa_A 187 TPKYLARPCDLND 199 (695)
T ss_dssp CSSEEEEECCTTC
T ss_pred CCCeeEEeCcCCC
Confidence 1488999999986
No 414
>3hsr_A HTH-type transcriptional regulator SARZ; helix-turn-helix, cysteine disulfide, MARR-family transcript regulator, DNA-binding; 1.90A {Staphylococcus aureus subsp} PDB: 3hse_A 3hrm_A 4gxo_A
Probab=43.16 E-value=6.1 Score=27.33 Aligned_cols=47 Identities=13% Similarity=0.117 Sum_probs=31.9
Q ss_pred HHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCC----CC---CceecCHhhhhhhc
Q 046346 36 IQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNND----EE---QGYVLTNASKLLLK 83 (209)
Q Consensus 36 ~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~----~~---~~y~~t~~s~~l~~ 83 (209)
.++.++..|... +++|..+||+ |...|++++ .+ -.+.+|+.|+.+..
T Consensus 37 ~q~~vL~~l~~~-~~~t~~eLa~~l~~~~~tvs~~l~~L~~~Glv~r~~~~~D~R~~~~~LT~~G~~~~~ 105 (140)
T 3hsr_A 37 TGYIVLMAIEND-EKLNIKKLGERVFLDSGTLTPLLKKLEKKDYVVRTREEKDERNLQISLTEQGKAIKS 105 (140)
T ss_dssp HHHHHHHHSCTT-CEEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC-------CEEEECHHHHHTHH
T ss_pred HHHHHHHHHHHc-CCcCHHHHHHHHCCChhhHHHHHHHHHHCCCeEecCCCCCcceeeeeEChHHHHHHH
Confidence 334466667654 6899999999 778898442 12 25789999976554
No 415
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=43.10 E-value=57 Score=26.17 Aligned_cols=44 Identities=23% Similarity=0.111 Sum_probs=32.4
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhhcccC
Q 046346 141 FEGLNSLVDVGGGT-GTAAKAIAKAFPKLECTCFDL-PHVVNGLESD 185 (209)
Q Consensus 141 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~ 185 (209)
.....+||-+|+|. |.++..+++..- .++++.|. ++-.+.++++
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~l 219 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMG-AEVSVFARNEHKKQDALSM 219 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTT-CEEEEECSSSTTHHHHHHT
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHhc
Confidence 55667888898876 889999999874 58888886 4555555543
No 416
>3e6m_A MARR family transcriptional regulator; APC88769, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; 2.20A {Silicibacter pomeroyi}
Probab=43.03 E-value=6.8 Score=27.83 Aligned_cols=46 Identities=24% Similarity=0.307 Sum_probs=32.7
Q ss_pred HcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCC----C---CceecCHhhhhhhc
Q 046346 37 QLGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDE----E---QGYVLTNASKLLLK 83 (209)
Q Consensus 37 ~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~----~---~~y~~t~~s~~l~~ 83 (209)
++.++..|... +++|..+||+ |...|++++. + -.+.+|+.|+.+..
T Consensus 55 q~~vL~~l~~~-~~~t~~eLa~~l~~~~~~vs~~l~~Le~~Glv~r~~~~~DrR~~~~~LT~~G~~~~~ 122 (161)
T 3e6m_A 55 KLRLLSSLSAY-GELTVGQLATLGVMEQSTTSRTVDQLVDEGLAARSISDADQRKRTVVLTRKGKKKLA 122 (161)
T ss_dssp HHHHHHHHHHH-SEEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEECC---CCCSCEEEECHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeeCCcccCCeeEeeECHHHHHHHH
Confidence 44577777765 5899999999 7788984421 1 24789999976554
No 417
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=42.97 E-value=19 Score=29.23 Aligned_cols=30 Identities=17% Similarity=0.210 Sum_probs=24.7
Q ss_pred eEEEecCCccHHHHHHHHHCCCCeEEEeec
Q 046346 146 SLVDVGGGTGTAAKAIAKAFPKLECTCFDL 175 (209)
Q Consensus 146 ~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl 175 (209)
+|+-||+|.+-.+.++.-+.-+.+++++|.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er 32 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYER 32 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEec
Confidence 689999999888887666556789999986
No 418
>2eth_A Transcriptional regulator, putative, MAR family; MARR family, structural genomics, joint center for structura genomics, JCSG; 2.30A {Thermotoga maritima} SCOP: a.4.5.28
Probab=42.94 E-value=8.4 Score=27.07 Aligned_cols=48 Identities=19% Similarity=0.183 Sum_probs=33.2
Q ss_pred HHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCC----CCC---ceecCHhhhhhhc
Q 046346 35 SIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNND----EEQ---GYVLTNASKLLLK 83 (209)
Q Consensus 35 a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~----~~~---~y~~t~~s~~l~~ 83 (209)
..++.|+..|... +++|..+||+ |...|+++. .++ .|.+|+.|+.+..
T Consensus 44 ~~~~~iL~~l~~~-~~~t~~ela~~l~is~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~~~lT~~G~~~~~ 113 (154)
T 2eth_A 44 TTELYAFLYVALF-GPKKMKEIAEFLSTTKSNVTNVVDSLEKRGLVVREMDPVDRRTYRVVLTEKGKEIFG 113 (154)
T ss_dssp HHHHHHHHHHHHH-CCBCHHHHHHHTTSCHHHHHHHHHHHHHTTSEEEEECTTTSSCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHHc-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeeCCCCCcceeEEEECHHHHHHHH
Confidence 3455677777765 5899999999 778887432 122 3789999876553
No 419
>1z91_A Organic hydroperoxide resistance transcriptional; OHRR, MARR family, bacterial transcription factor, DNA bindi protein; 2.50A {Bacillus subtilis} SCOP: a.4.5.28 PDB: 1z9c_A*
Probab=42.61 E-value=6.6 Score=27.20 Aligned_cols=47 Identities=17% Similarity=0.195 Sum_probs=31.6
Q ss_pred HHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCC----CC---ceecCHhhhhhhc
Q 046346 36 IQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDE----EQ---GYVLTNASKLLLK 83 (209)
Q Consensus 36 ~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~----~~---~y~~t~~s~~l~~ 83 (209)
.++.++..|... ++.|..+||+ |...|+++.. ++ .+.+|+.|+.+..
T Consensus 41 ~~~~iL~~l~~~-~~~~~~~la~~l~~~~~tvs~~l~~L~~~glv~r~~~~~d~R~~~~~LT~~G~~~~~ 109 (147)
T 1z91_A 41 PQYLALLLLWEH-ETLTVKKMGEQLYLDSGTLTPMLKRMEQQGLITRKRSEEDERSVLISLTEDGALLKE 109 (147)
T ss_dssp HHHHHHHHHHHH-SEEEHHHHHHTTTCCHHHHHHHHHHHHHHTSEECCBCSSCTTSBEEEECHHHHSGGG
T ss_pred HHHHHHHHHHHC-CCCCHHHHHHHHCCCcCcHHHHHHHHHHCCCEEeccCCCCCCeeEEEECHhHHHHHH
Confidence 345566667654 5889999998 7788874421 12 3789999876554
No 420
>2gxg_A 146AA long hypothetical transcriptional regulator; winged helix; 1.45A {Sulfolobus tokodaii} PDB: 2eb7_A 2yr2_A 3gez_A 3gf2_A* 3gfi_A 3gfm_A 3gfj_A 3gfl_A
Probab=42.47 E-value=11 Score=26.01 Aligned_cols=46 Identities=15% Similarity=0.126 Sum_probs=32.2
Q ss_pred HHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCC----CCC---ceecCHhhhhhhc
Q 046346 36 IQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNND----EEQ---GYVLTNASKLLLK 83 (209)
Q Consensus 36 ~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~----~~~---~y~~t~~s~~l~~ 83 (209)
.++.++..|. . ++.|..+||+ |...|+++. .++ .+.+|+.|+.+..
T Consensus 38 ~~~~iL~~l~-~-~~~~~~ela~~l~~s~~tvs~~l~~Le~~glv~r~~~~~d~r~~~~~lT~~G~~~~~ 105 (146)
T 2gxg_A 38 LDFLVLRATS-D-GPKTMAYLANRYFVTQSAITASVDKLEEMGLVVRVRDREDRRKILIEITEKGLETFN 105 (146)
T ss_dssp HHHHHHHHHT-T-SCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEECSSCTTCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHh-c-CCcCHHHHHHHhCCCchhHHHHHHHHHHCCCEEeecCCCCCceEEEEECHHHHHHHH
Confidence 3555677777 4 7999999999 778888431 122 3789999876553
No 421
>3cuo_A Uncharacterized HTH-type transcriptional regulato; DNA-binding transcriptional regulator, structural genomics, MCSG; 2.00A {Escherichia coli K12}
Probab=42.42 E-value=10 Score=24.33 Aligned_cols=47 Identities=15% Similarity=0.203 Sum_probs=31.8
Q ss_pred HHHHHHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCC--C--CCCceecCHhh
Q 046346 31 TLKCSIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNN--D--EEQGYVLTNAS 78 (209)
Q Consensus 31 ~l~~a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e--~--~~~~y~~t~~s 78 (209)
++..-.++.|+..|.. +++.|..|||+ |...|+++ . ..-.|.+|+.+
T Consensus 20 ~l~~~~~~~il~~l~~-~~~~s~~ela~~l~is~~tvs~~l~~L~~~glv~~~~~~r~~~y~l~~~~ 85 (99)
T 3cuo_A 20 AMSHPKRLLILCMLSG-SPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEA 85 (99)
T ss_dssp HHCSHHHHHHHHHHTT-CCSEEHHHHHHHHCCCHHHHHHHHHHHHHTTSEEEEECSSCEEEEECCHH
T ss_pred HhCChHHHHHHHHHHh-CCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEecCCEEEEEEChHH
Confidence 4444566778888866 36899999999 67788743 1 12247777765
No 422
>3kp7_A Transcriptional regulator TCAR; multiple drug resistance, biofilm, transcription regulation, binding, transcription regulator; 2.30A {Staphylococcus epidermidis RP62A} PDB: 3kp3_A* 3kp4_A* 3kp5_A* 3kp2_A* 3kp6_A
Probab=42.41 E-value=59 Score=22.26 Aligned_cols=45 Identities=18% Similarity=0.250 Sum_probs=31.4
Q ss_pred HcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCC------CCC---ceecCHhhhhhhc
Q 046346 37 QLGIPDIINKHGKPMTLNELQK---------------LVSSGNNND------EEQ---GYVLTNASKLLLK 83 (209)
Q Consensus 37 ~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~------~~~---~y~~t~~s~~l~~ 83 (209)
++.++..| .. +++|..+||+ |...|+++. .++ .+.+|+.|+.+..
T Consensus 40 q~~iL~~l-~~-~~~t~~eLa~~l~~~~~~vs~~l~~Le~~Glv~r~~~~~~~D~R~~~~~lT~~G~~~~~ 108 (151)
T 3kp7_A 40 QSHVLNML-SI-EALTVGQITEKQGVNKAAVSRRVKKLLNAELVKLEKPDSNTDQRLKIIKLSNKGKKYIK 108 (151)
T ss_dssp HHHHHHHH-HH-SCBCHHHHHHHHCSCSSHHHHHHHHHHHTTSEEC-----------CCBEECHHHHHHHH
T ss_pred HHHHHHHH-Hc-CCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeeCCCCCCCCCeeEEEECHhHHHHHH
Confidence 44477888 54 7999999999 778898442 122 3789999876554
No 423
>3eco_A MEPR; mutlidrug efflux pump regulator winged helix-turn-helix motif, DNA-binding, transcription, transcription regulation; 2.40A {Staphylococcus aureus} SCOP: a.4.5.0
Probab=42.34 E-value=8.9 Score=26.26 Aligned_cols=48 Identities=19% Similarity=0.131 Sum_probs=33.0
Q ss_pred HHcCchhHhhhCC-CCCCHHHHHH---------------HHhCCCCCC----CC---CceecCHhhhhhhc
Q 046346 36 IQLGIPDIINKHG-KPMTLNELQK---------------LVSSGNNND----EE---QGYVLTNASKLLLK 83 (209)
Q Consensus 36 ~~lglfd~L~~~g-~~~t~~eLA~---------------L~~~g~~e~----~~---~~y~~t~~s~~l~~ 83 (209)
.++.++..|...+ +++|..+||+ |...|+++. .+ -.+.+|+.|+.+..
T Consensus 32 ~~~~vL~~l~~~~~~~~t~~ela~~l~~~~~tvs~~l~~Le~~Gli~r~~~~~D~R~~~~~LT~~G~~~~~ 102 (139)
T 3eco_A 32 EQGHTLGYLYAHQQDGLTQNDIAKALQRTGPTVSNLLRNLERKKLIYRYVDAQDTRRKNIGLTTSGIKLVE 102 (139)
T ss_dssp HHHHHHHHHHHSTTTCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECCC--CCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcCHHHHHHHhCCCcccHHHHHHHHHHCCCEeecCCCCCCCeeeeEECHHHHHHHH
Confidence 4455777777653 4899999999 778898431 12 24789999876554
No 424
>1yyv_A Putative transcriptional regulator; reductive methylation, D lysine, structural genomics, PSI; HET: MLY; 2.35A {Salmonella typhimurium} SCOP: a.4.5.69
Probab=42.20 E-value=8.5 Score=26.84 Aligned_cols=66 Identities=17% Similarity=0.077 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC--chhHhhhCCC-CCCHHHHHH----HHhCCCCCC----CC---CceecCHhhhh
Q 046346 15 AQIHVWNHIFNFINSMTLKCSIQLG--IPDIINKHGK-PMTLNELQK----LVSSGNNND----EE---QGYVLTNASKL 80 (209)
Q Consensus 15 ~~~~l~~~~~g~~~~~~l~~a~~lg--lfd~L~~~g~-~~t~~eLA~----L~~~g~~e~----~~---~~y~~t~~s~~ 80 (209)
+...+++++.+.|....|.... -| =|..|.+. - .++..-|+. |...|++++ .+ -.|.+|+.|+.
T Consensus 24 ~~~~~l~~l~~~w~l~IL~~L~-~g~~~~~eLa~~-l~gis~~tls~~L~~Le~~GlV~r~~~~~d~r~~~y~LT~~G~~ 101 (131)
T 1yyv_A 24 PSREVLKHVTSRWGVLILVALR-DGTHRFSDLRRX-MGGVSEXMLAQSLQALEQDGFLNRVSYPVVPPHVEYSLTPLGEQ 101 (131)
T ss_dssp THHHHHHHHHSHHHHHHHHHGG-GCCEEHHHHHHH-STTCCHHHHHHHHHHHHHHTCEEEEEECSSSCEEEEEECHHHHH
T ss_pred CHHHHHHHHcCCcHHHHHHHHH-cCCCCHHHHHHH-hccCCHHHHHHHHHHHHHCCcEEEEecCCCCCeEEEEECccHHH
Confidence 4566777777777665554432 12 12233221 1 133333333 778888442 11 25899999865
Q ss_pred hh
Q 046346 81 LL 82 (209)
Q Consensus 81 l~ 82 (209)
+.
T Consensus 102 l~ 103 (131)
T 1yyv_A 102 VS 103 (131)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 425
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=42.16 E-value=26 Score=28.57 Aligned_cols=64 Identities=11% Similarity=0.189 Sum_probs=41.6
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCe-EEEeec-hHHHhhcccCCCCeEEEEccCCC----CCC--CCcEEEe
Q 046346 145 NSLVDVGGGTGTAAKAIAKAFPKLE-CTCFDL-PHVVNGLESDLVNLKYVGGDMFK----AIS--PADAVVL 208 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~l~~~~P~l~-~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~----~~p--~~D~~~l 208 (209)
-+++|+=||.|.++.++.++.-+.+ +...|. +..++.-+...+...+..+|..+ .+| .+|+++.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~g 75 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILM 75 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEe
Confidence 4799999999999999999865444 357787 44444333223334456777754 233 3677764
No 426
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=42.12 E-value=52 Score=24.48 Aligned_cols=53 Identities=11% Similarity=0.002 Sum_probs=31.1
Q ss_pred CeEEEecCCccHHHHHHHHHC--CC--CeEEEeech-HHHhhcccC-CCCeEEEEccCCC
Q 046346 145 NSLVDVGGGTGTAAKAIAKAF--PK--LECTCFDLP-HVVNGLESD-LVNLKYVGGDMFK 198 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~l~~~~--P~--l~~~~~Dlp-~v~~~a~~~-~~ri~~~~gD~~~ 198 (209)
+++|-.| |+|.++.++++++ -+ .++++.++. +..+...+. ..++.++.+|+.+
T Consensus 4 k~vlItG-asggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~ 62 (250)
T 1yo6_A 4 GSVVVTG-ANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTC 62 (250)
T ss_dssp SEEEESS-CSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTC
T ss_pred CEEEEec-CCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCC
Confidence 4556554 5566666665553 23 678888873 222222212 4678899999875
No 427
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=41.98 E-value=43 Score=24.93 Aligned_cols=61 Identities=18% Similarity=0.122 Sum_probs=36.0
Q ss_pred CCeEEEecCCccHHHHHHHHHC--CCCeEEEeech-HHHhhcccCCCCe-EEEEccCCCC----CCCCcEEE
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAF--PKLECTCFDLP-HVVNGLESDLVNL-KYVGGDMFKA----ISPADAVV 207 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~--P~l~~~~~Dlp-~v~~~a~~~~~ri-~~~~gD~~~~----~p~~D~~~ 207 (209)
..+++-. ||+|.++..++++. .+.+++++++. +-.+... ..++ +++.+|+.+. +...|+++
T Consensus 21 ~~~ilVt-GatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~D~vi 89 (236)
T 3e8x_A 21 GMRVLVV-GANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR--ERGASDIVVANLEEDFSHAFASIDAVV 89 (236)
T ss_dssp CCEEEEE-TTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH--HTTCSEEEECCTTSCCGGGGTTCSEEE
T ss_pred CCeEEEE-CCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH--hCCCceEEEcccHHHHHHHHcCCCEEE
Confidence 3566655 45666666665553 24688888883 3232222 2478 8999998742 23367765
No 428
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=41.55 E-value=29 Score=29.30 Aligned_cols=32 Identities=19% Similarity=0.194 Sum_probs=27.0
Q ss_pred CeEEEecCCccHHHHH--HHHHCCCCeEEEeech
Q 046346 145 NSLVDVGGGTGTAAKA--IAKAFPKLECTCFDLP 176 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~--l~~~~P~l~~~~~Dlp 176 (209)
.+|+-||+|.+-++.+ |+++.|+.+++++|..
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~ 37 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQA 37 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECC
Confidence 5799999999887664 7777899999999974
No 429
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=41.23 E-value=36 Score=25.07 Aligned_cols=62 Identities=13% Similarity=0.235 Sum_probs=36.9
Q ss_pred CeEEEecCCccHHHHHHHHHC---CCCeEEEeech-H-HHhhcccCCCCeEEEEccCCCC------CCCCcEEE
Q 046346 145 NSLVDVGGGTGTAAKAIAKAF---PKLECTCFDLP-H-VVNGLESDLVNLKYVGGDMFKA------ISPADAVV 207 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~l~~~~---P~l~~~~~Dlp-~-v~~~a~~~~~ri~~~~gD~~~~------~p~~D~~~ 207 (209)
++++-.| |+|.++.+++++. .+.+++++++. + .++.......+++++.+|+.++ +...|+++
T Consensus 6 k~vlVtG-asg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv 78 (221)
T 3r6d_A 6 XYITILG-AAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVF 78 (221)
T ss_dssp SEEEEES-TTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred EEEEEEe-CCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEE
Confidence 3466555 5555565555442 46788888884 3 3322211357899999999862 12367765
No 430
>1s3j_A YUSO protein; structural genomics, MARR transcriptional regulator family, PSI, protein structure initiative; HET: MSE; 2.25A {Bacillus subtilis} SCOP: a.4.5.28
Probab=40.43 E-value=5.5 Score=27.91 Aligned_cols=46 Identities=17% Similarity=0.280 Sum_probs=31.6
Q ss_pred HcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCC----CC---ceecCHhhhhhhc
Q 046346 37 QLGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDE----EQ---GYVLTNASKLLLK 83 (209)
Q Consensus 37 ~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~----~~---~y~~t~~s~~l~~ 83 (209)
++.|+..|... ++.|..+||+ |...|+++.. ++ .+.+|+.|+.+..
T Consensus 39 ~~~iL~~l~~~-~~~t~~ela~~l~~s~~tvs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~~ 106 (155)
T 1s3j_A 39 QLFVLASLKKH-GSLKVSEIAERMEVKPSAVTLMADRLEQKNLIARTHNTKDRRVIDLSLTDEGDIKFE 106 (155)
T ss_dssp HHHHHHHHHHH-SEEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeecCCCCCCceEEEEECHHHHHHHH
Confidence 34467777764 6899999998 7788884321 11 4789999875543
No 431
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=40.33 E-value=26 Score=29.38 Aligned_cols=31 Identities=23% Similarity=0.314 Sum_probs=26.0
Q ss_pred CeEEEecCCccHHHH--HHHHHCCCCeEEEeec
Q 046346 145 NSLVDVGGGTGTAAK--AIAKAFPKLECTCFDL 175 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~--~l~~~~P~l~~~~~Dl 175 (209)
.+|+-||||.+-++. .|+++.|+.+++++|.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~ 35 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDK 35 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEEC
Confidence 478999999987766 4677789999999996
No 432
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=40.18 E-value=54 Score=26.42 Aligned_cols=41 Identities=15% Similarity=0.213 Sum_probs=33.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeech----HHHhhccc
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLP----HVVNGLES 184 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp----~v~~~a~~ 184 (209)
.....|||-=||+|+.+.+..+. +-+++++|+. ..++.+++
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~~~~~~~~~~~~~ 285 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQE--GRNSICTDAAPVFKEYYQKQLT 285 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHH--TCEEEEEESSTHHHHHHHHHHH
T ss_pred CCCCEEEecCCCCCHHHHHHHHc--CCcEEEEECCccHHHHHHHHHH
Confidence 35679999999999999999988 5789999994 56666553
No 433
>2q7x_A UPF0052 protein SP_1565; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; HET: MLY MSE; 2.00A {Streptococcus pneumoniae}
Probab=40.01 E-value=22 Score=29.12 Aligned_cols=27 Identities=19% Similarity=0.411 Sum_probs=18.8
Q ss_pred CCeEEEecCCccHH--HHHHHHHCCCCeE
Q 046346 144 LNSLVDVGGGTGTA--AKAIAKAFPKLEC 170 (209)
Q Consensus 144 ~~~vlDvGgG~G~~--~~~l~~~~P~l~~ 170 (209)
..+||-+|||+|.. +..|.+...++++
T Consensus 4 ~~~IV~igGGtGl~~ll~gLk~~~~~iTa 32 (326)
T 2q7x_A 4 XPXITVIGGGTGSPVILXSLREXDVEIAA 32 (326)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHSSCEEEE
T ss_pred CCeEEEEcCcccHHHHHHHhccCCCCeEE
Confidence 36899999999954 4456555455664
No 434
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=39.97 E-value=21 Score=29.07 Aligned_cols=64 Identities=8% Similarity=0.043 Sum_probs=40.6
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeE--EEeec-hHHHhhccc-CCCCeEEEEccCCC----CCC--CCcEEEe
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLEC--TCFDL-PHVVNGLES-DLVNLKYVGGDMFK----AIS--PADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~--~~~Dl-p~v~~~a~~-~~~ri~~~~gD~~~----~~p--~~D~~~l 208 (209)
..-+++|+-||.|.++.++.+..-..++ ...|. +..++.-+. .... ++.+|..+ .+| .+|+++.
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~--~~~~DI~~~~~~~i~~~~~Dil~g 82 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE--VQVKNLDSISIKQIESLNCNTWFM 82 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC--CBCCCTTTCCHHHHHHTCCCEEEE
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC--cccCChhhcCHHHhccCCCCEEEe
Confidence 3468999999999999999998533343 47888 444443332 1111 45667655 233 3677764
No 435
>3f6o_A Probable transcriptional regulator, ARSR family protein; transcriptional regulator,RHA00566,MCSG, structural genomics, PSI-2; 1.90A {Rhodococcus SP}
Probab=39.66 E-value=7.3 Score=26.43 Aligned_cols=48 Identities=19% Similarity=0.230 Sum_probs=32.3
Q ss_pred HHHHHHHHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCC--CC--CCceecCHhh
Q 046346 29 SMTLKCSIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNN--DE--EQGYVLTNAS 78 (209)
Q Consensus 29 ~~~l~~a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e--~~--~~~y~~t~~s 78 (209)
..+|.--.++.|+..|.. +|.|+.+||+ |...|+++ +. .-.|.+++.+
T Consensus 12 ~~al~~~~R~~Il~~L~~--~~~~~~eLa~~l~is~~tvs~hL~~L~~~GlV~~~~~gr~~~y~l~~~~ 78 (118)
T 3f6o_A 12 FQALADPTRRAVLGRLSR--GPATVSELAKPFDMALPSFMKHIHFLEDSGWIRTHKQGRVRTCAIEKEP 78 (118)
T ss_dssp HHHHTSHHHHHHHHHHHT--CCEEHHHHHTTCCSCHHHHHHHHHHHHHTTSEEEEEETTEEEEEECSHH
T ss_pred HHHhCCHHHHHHHHHHHh--CCCCHHHHHHHhCcCHHHHHHHHHHHHHCCCeEEEecCCEEEEEECHHH
Confidence 344555566777777774 7899999998 67788843 21 2247777755
No 436
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=39.66 E-value=1.1e+02 Score=24.44 Aligned_cols=45 Identities=18% Similarity=0.180 Sum_probs=33.3
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhhcccC
Q 046346 141 FEGLNSLVDVGGGT-GTAAKAIAKAFPKLECTCFDL-PHVVNGLESD 185 (209)
Q Consensus 141 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~ 185 (209)
.....+||-+|+|. |.++..+++..---++++.|. ++-.+.+++.
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 215 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI 215 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 45567888899876 899999999875448888886 5555655543
No 437
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=38.99 E-value=61 Score=24.86 Aligned_cols=56 Identities=18% Similarity=0.014 Sum_probs=34.4
Q ss_pred cCCccHHHHHHHHHC---CCCeEEEeech-HHHhhcccCCCCeEEEEccCCCC------CCCCcEEEe
Q 046346 151 GGGTGTAAKAIAKAF---PKLECTCFDLP-HVVNGLESDLVNLKYVGGDMFKA------ISPADAVVL 208 (209)
Q Consensus 151 GgG~G~~~~~l~~~~---P~l~~~~~Dlp-~v~~~a~~~~~ri~~~~gD~~~~------~p~~D~~~l 208 (209)
=||+|.++..++++. +..+++++++. +..... ...+++++.+|+.++ +..+|+++.
T Consensus 6 tGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~--~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~ 71 (289)
T 3e48_A 6 TGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD--WRGKVSVRQLDYFNQESMVEAFKGMDTVVF 71 (289)
T ss_dssp ETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG--GBTTBEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred EcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh--hhCCCEEEEcCCCCHHHHHHHHhCCCEEEE
Confidence 356676666665553 46778888873 222111 246899999999872 234677753
No 438
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=38.62 E-value=67 Score=25.63 Aligned_cols=67 Identities=12% Similarity=0.033 Sum_probs=43.8
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCe-EEEeec-hHHHhhcccCCCCeEEEEccCCC----CC---CCCcEEEe
Q 046346 142 EGLNSLVDVGGGTGTAAKAIAKAFPKLE-CTCFDL-PHVVNGLESDLVNLKYVGGDMFK----AI---SPADAVVL 208 (209)
Q Consensus 142 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~-~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~----~~---p~~D~~~l 208 (209)
...-+++|+=||.|.++.++.+..-+.. +...|. +..++.-+...+...+..+|..+ .+ +.+|+++.
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~g 89 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIG 89 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEE
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEEe
Confidence 4457899999999999999999865544 467787 44443322223344567788765 12 24787764
No 439
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=38.52 E-value=28 Score=28.65 Aligned_cols=32 Identities=19% Similarity=0.120 Sum_probs=25.7
Q ss_pred CeEEEecCCccHHHH--HHHHHCCCCeEEEeech
Q 046346 145 NSLVDVGGGTGTAAK--AIAKAFPKLECTCFDLP 176 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~--~l~~~~P~l~~~~~Dlp 176 (209)
..|+-||||..-.+. .|++++|+++++++|..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~ 70 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEG 70 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence 579999999866555 57788889999999973
No 440
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=38.24 E-value=40 Score=24.54 Aligned_cols=57 Identities=21% Similarity=0.259 Sum_probs=34.0
Q ss_pred EEEecCCccHHHHHHHHHC--CCCeEEEeech-HHHhhcccCCCCeEEEEccCCCC----CCCCcEEE
Q 046346 147 LVDVGGGTGTAAKAIAKAF--PKLECTCFDLP-HVVNGLESDLVNLKYVGGDMFKA----ISPADAVV 207 (209)
Q Consensus 147 vlDvGgG~G~~~~~l~~~~--P~l~~~~~Dlp-~v~~~a~~~~~ri~~~~gD~~~~----~p~~D~~~ 207 (209)
|+-. ||+|.++..++++. .+.+++++++. +-.+. ...+++++.+|+.++ +...|+++
T Consensus 3 vlVt-GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~~~~~~D~~d~~~~~~~~~d~vi 66 (221)
T 3ew7_A 3 IGII-GATGRAGSRILEEAKNRGHEVTAIVRNAGKITQ---THKDINILQKDIFDLTLSDLSDQNVVV 66 (221)
T ss_dssp EEEE-TTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHH---HCSSSEEEECCGGGCCHHHHTTCSEEE
T ss_pred EEEE-cCCchhHHHHHHHHHhCCCEEEEEEcCchhhhh---ccCCCeEEeccccChhhhhhcCCCEEE
Confidence 4434 45666666555543 24678888873 33322 126889999999763 23367665
No 441
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=37.83 E-value=34 Score=29.80 Aligned_cols=33 Identities=27% Similarity=0.315 Sum_probs=27.6
Q ss_pred CCCeEEEecCCccHHHHH--HHHHCCCCeEEEeec
Q 046346 143 GLNSLVDVGGGTGTAAKA--IAKAFPKLECTCFDL 175 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~--l~~~~P~l~~~~~Dl 175 (209)
...+|+-||||.+-++.+ |+++.|+.+++++|.
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~ 69 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVER 69 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEEC
Confidence 457899999999877664 677788999999996
No 442
>2nyx_A Probable transcriptional regulatory protein, RV14; alpha/beta, structural genomics, PSI-2; 2.30A {Mycobacterium tuberculosis}
Probab=37.75 E-value=8 Score=27.75 Aligned_cols=47 Identities=21% Similarity=0.273 Sum_probs=32.9
Q ss_pred HHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCC----CCC---ceecCHhhhhhhc
Q 046346 36 IQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNND----EEQ---GYVLTNASKLLLK 83 (209)
Q Consensus 36 ~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~----~~~---~y~~t~~s~~l~~ 83 (209)
.++.|+..|... +++|..+||+ |...|++++ .+. .+.+|+.|+.+..
T Consensus 46 ~~~~iL~~L~~~-~~~t~~eLa~~l~is~~tvs~~l~~Le~~GlV~r~~~~~DrR~~~~~LT~~G~~~~~ 114 (168)
T 2nyx_A 46 PQFRTLVILSNH-GPINLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVR 114 (168)
T ss_dssp HHHHHHHHHHHH-CSEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECSSCSSCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEeccCCCCCCeeEEEECHHHHHHHH
Confidence 345577778765 6899999999 778898432 222 3789999875543
No 443
>3tgn_A ADC operon repressor ADCR; helix-turn-helix, transcriptional regulator, transcription; 2.00A {Streptococcus pneumoniae}
Probab=37.61 E-value=21 Score=24.46 Aligned_cols=46 Identities=24% Similarity=0.306 Sum_probs=30.5
Q ss_pred HHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCC----C---CceecCHhhhhhhc
Q 046346 36 IQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDE----E---QGYVLTNASKLLLK 83 (209)
Q Consensus 36 ~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~----~---~~y~~t~~s~~l~~ 83 (209)
.++.|+..|... + .|..+||+ |...|+++.. + -.|.+|+.|..+..
T Consensus 39 ~~~~iL~~l~~~-~-~t~~eLa~~l~~s~~tvs~~l~~L~~~Glv~r~~~~~d~R~~~~~lT~~g~~~~~ 106 (146)
T 3tgn_A 39 TQEHILMLLSEE-S-LTNSELARRLNVSQAAVTKAIKSLVKEGMLETSKDSKDARVIFYQLTDLARPIAE 106 (146)
T ss_dssp HHHHHHHHHTTC-C-CCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEC----------CCEECGGGHHHHH
T ss_pred HHHHHHHHHHhC-C-CCHHHHHHHHCCCHHHHHHHHHHHHHCCCeEeccCCCCCceeEEEECHhHHHHHH
Confidence 455567777763 4 99999999 7788984422 2 24788888865543
No 444
>1z7u_A Hypothetical protein EF0647; winged-helix-turn-helix, MARR, structural genomics, PSI, Pro structure initiative; 2.20A {Enterococcus faecalis} SCOP: a.4.5.69
Probab=37.21 E-value=10 Score=25.48 Aligned_cols=57 Identities=16% Similarity=0.056 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCchhHhhhCCCCCCHHHHHH----------------HHhCCCCCC----CC---Cc
Q 046346 15 AQIHVWNHIFNFINSMTLKCSIQLGIPDIINKHGKPMTLNELQK----------------LVSSGNNND----EE---QG 71 (209)
Q Consensus 15 ~~~~l~~~~~g~~~~~~l~~a~~lglfd~L~~~g~~~t~~eLA~----------------L~~~g~~e~----~~---~~ 71 (209)
+...+++++.+.+...+|.. |.. ++.+..+||+ |...|+++. .+ -.
T Consensus 11 ~~~~~l~~l~~~~~~~IL~~---------L~~--~~~~~~eLa~~l~~is~~tvs~~L~~Le~~GlI~r~~~~~d~r~~~ 79 (112)
T 1z7u_A 11 SINLALSTINGKWKLSLMDE---------LFQ--GTKRNGELMRALDGITQRVLTDRLREMEKDGLVHRESFNELPPRVE 79 (112)
T ss_dssp HHHHHHHTTCSTTHHHHHHH---------HHH--SCBCHHHHHHHSTTCCHHHHHHHHHHHHHHTSEEEEEECCSSCEEE
T ss_pred CHHHHHHHHcCccHHHHHHH---------HHh--CCCCHHHHHHHhccCCHHHHHHHHHHHHHCCCEEEeecCCCCCeEE
Confidence 34455555555555444433 332 3566666665 667787431 11 14
Q ss_pred eecCHhhhhhh
Q 046346 72 YVLTNASKLLL 82 (209)
Q Consensus 72 y~~t~~s~~l~ 82 (209)
|.+|+.|+.+.
T Consensus 80 ~~LT~~G~~~~ 90 (112)
T 1z7u_A 80 YTLTPEGYALY 90 (112)
T ss_dssp EEECHHHHHHH
T ss_pred EEECHhHHHHH
Confidence 89999886543
No 445
>2fbi_A Probable transcriptional regulator; MARR, APC5816, structural genomic protein structure initiative; 2.10A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=37.19 E-value=7 Score=26.77 Aligned_cols=47 Identities=19% Similarity=0.171 Sum_probs=32.1
Q ss_pred HHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCC----CCC---ceecCHhhhhhhc
Q 046346 36 IQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNND----EEQ---GYVLTNASKLLLK 83 (209)
Q Consensus 36 ~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~----~~~---~y~~t~~s~~l~~ 83 (209)
.++.++..|... ++.|..+||+ |...|+++. .++ .+.+|+.|+.+..
T Consensus 37 ~~~~iL~~l~~~-~~~t~~ela~~l~~s~~~vs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~~ 105 (142)
T 2fbi_A 37 QQWRVIRILRQQ-GEMESYQLANQACILRPSMTGVLARLERDGIVRRWKAPKDQRRVYVNLTEKGQQCFV 105 (142)
T ss_dssp HHHHHHHHHHHH-CSEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCCCHhHHHHHHHHHHHCCCEEeecCCCCCCeeEEEECHHHHHHHH
Confidence 455577777765 5899999999 678887442 122 3788888875543
No 446
>2y75_A HTH-type transcriptional regulator CYMR; DNA binding protein; 2.00A {Bacillus subtilis}
Probab=37.01 E-value=17 Score=24.87 Aligned_cols=30 Identities=27% Similarity=0.440 Sum_probs=21.3
Q ss_pred CCCCCHHHHHH---------------HHhCCCCCC--C-CCceecCHh
Q 046346 48 GKPMTLNELQK---------------LVSSGNNND--E-EQGYVLTNA 77 (209)
Q Consensus 48 g~~~t~~eLA~---------------L~~~g~~e~--~-~~~y~~t~~ 77 (209)
+++.|+++||+ |...|+++. + .|.|.++..
T Consensus 24 ~~~~s~~ela~~~~i~~~~v~~il~~L~~~Glv~~~~g~~ggy~L~~~ 71 (129)
T 2y75_A 24 EGPTSLKSIAQTNNLSEHYLEQLVSPLRNAGLVKSIRGAYGGYVLGSE 71 (129)
T ss_dssp SCCBCHHHHHHHTTSCHHHHHHHHHHHHHTTSEEEC----CCEEESSC
T ss_pred CCcCCHHHHHHHHCcCHHHHHHHHHHHHHCCceEecCCCCCceEeCCC
Confidence 36899999999 778898542 2 467887653
No 447
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=36.77 E-value=33 Score=28.82 Aligned_cols=31 Identities=23% Similarity=0.446 Sum_probs=26.7
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEeec
Q 046346 145 NSLVDVGGGTGTAAKAIAKAFPKLECTCFDL 175 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl 175 (209)
..|+-||||.+.++.+..-+-.+.+++++|.
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~ 35 (450)
T 1ges_A 5 YDYIAIGGGSGGIASINRAAMYGQKCALIEA 35 (450)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEcC
Confidence 4689999999998888777778899999995
No 448
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=36.39 E-value=1e+02 Score=22.92 Aligned_cols=54 Identities=6% Similarity=-0.042 Sum_probs=30.1
Q ss_pred CCeEEEecCCccHHHHHHHHHC--CCCeEEEeech-HHHhh----cccCCCCeEEEEccCCC
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAF--PKLECTCFDLP-HVVNG----LESDLVNLKYVGGDMFK 198 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~--P~l~~~~~Dlp-~v~~~----a~~~~~ri~~~~gD~~~ 198 (209)
.+++|-.||+. .++.++++++ -+.++++.++. +..+. .++...++.++.+|+.+
T Consensus 5 ~k~vlITGas~-gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 65 (247)
T 3lyl_A 5 EKVALVTGASR-GIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISD 65 (247)
T ss_dssp TCEEEESSCSS-HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred CCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCC
Confidence 35666666554 4444444332 24677888873 22222 12235678888999875
No 449
>2fxa_A Protease production regulatory protein HPR; protease porduction, regulation, STR genomics, PSI, protein structure initiative; HET: PGE P6G 1PE; 2.40A {Bacillus subtilis} SCOP: a.4.5.28
Probab=36.27 E-value=8.6 Score=28.94 Aligned_cols=46 Identities=17% Similarity=0.094 Sum_probs=31.8
Q ss_pred HcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCCC----CC---ceecCHhhhhhhc
Q 046346 37 QLGIPDIINKHGKPMTLNELQK---------------LVSSGNNNDE----EQ---GYVLTNASKLLLK 83 (209)
Q Consensus 37 ~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~~----~~---~y~~t~~s~~l~~ 83 (209)
++.|+..|... +++|..+||+ |...|++++. +. .+.+|+.|+.+..
T Consensus 50 q~~iL~~L~~~-~~~t~~eLa~~l~i~~stvs~~l~~Le~~GlV~r~~~~~DrR~~~l~LT~~G~~~~~ 117 (207)
T 2fxa_A 50 EHHILWIAYQL-NGASISEIAKFGVMHVSTAFNFSKKLEERGYLRFSKRLNDKRNTYVQLTEEGTEVFW 117 (207)
T ss_dssp HHHHHHHHHHH-TSEEHHHHHHHTTCCHHHHHHHHHHHHHHTSEEEECC------CEEEECHHHHHHHH
T ss_pred HHHHHHHHHHC-CCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecCCCCCceEEEEECHHHHHHHH
Confidence 44567777665 5899999999 7788984421 11 5789999975543
No 450
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=36.21 E-value=44 Score=28.15 Aligned_cols=63 Identities=14% Similarity=0.140 Sum_probs=37.8
Q ss_pred CeEEEecCCccHHHHHH----HHHCC---CCeEEEeech-HHHhhc----cc-CCCCeEEEE-ccCCCCCCCCcEEEe
Q 046346 145 NSLVDVGGGTGTAAKAI----AKAFP---KLECTCFDLP-HVVNGL----ES-DLVNLKYVG-GDMFKAISPADAVVL 208 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~l----~~~~P---~l~~~~~Dlp-~v~~~a----~~-~~~ri~~~~-gD~~~~~p~~D~~~l 208 (209)
.+|.-||+|++ ++..+ +.+.+ ..+.+++|+. +.++.+ .. ....+++.. .|..+.+..+|+++.
T Consensus 3 ~KI~IIGaG~v-~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~~~~~~~~~~~~~v~~t~d~~~al~~AD~Vii 79 (417)
T 1up7_A 3 MRIAVIGGGSS-YTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIF 79 (417)
T ss_dssp CEEEEETTTCT-THHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEE
T ss_pred CEEEEECCCHH-HHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHHHHHHHHhhCCeEEEEeCCHHHHhCCCCEEEE
Confidence 47888999997 66655 65333 4578999983 332222 21 111255554 465455677898875
No 451
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=36.07 E-value=27 Score=27.34 Aligned_cols=32 Identities=13% Similarity=0.184 Sum_probs=25.9
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEeec
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL 175 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl 175 (209)
...|+-||||.+-++.+..-+..+.+++++|.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 38 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIES 38 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEc
Confidence 35799999999988887655556889999997
No 452
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=36.05 E-value=27 Score=27.37 Aligned_cols=30 Identities=13% Similarity=0.253 Sum_probs=23.1
Q ss_pred eEEEecCCccHHHHHHHHHCCCCeEEEeec
Q 046346 146 SLVDVGGGTGTAAKAIAKAFPKLECTCFDL 175 (209)
Q Consensus 146 ~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl 175 (209)
-|+-||+|++-++.++.-+.-+.+++++|.
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE~ 37 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIER 37 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEec
Confidence 479999999988776544444778888885
No 453
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=35.99 E-value=30 Score=29.96 Aligned_cols=33 Identities=27% Similarity=0.406 Sum_probs=25.7
Q ss_pred CCCeEEEecCCccHHHHH--HHHHC-CCCeEEEeec
Q 046346 143 GLNSLVDVGGGTGTAAKA--IAKAF-PKLECTCFDL 175 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~--l~~~~-P~l~~~~~Dl 175 (209)
....||-||||..-.+.+ |++.+ ++.+++++|.
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~ 59 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQA 59 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEEC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeC
Confidence 356899999999887775 44444 8899999996
No 454
>3hrs_A Metalloregulator SCAR; DTXR/MNTR family member, transcription; 2.70A {Streptococcus gordonii} PDB: 3hrt_A 3hru_A
Probab=35.79 E-value=26 Score=26.49 Aligned_cols=35 Identities=23% Similarity=0.337 Sum_probs=27.2
Q ss_pred CCCCCHHHHHH---------------HHhCCCCCC-CCCceecCHhhhhhh
Q 046346 48 GKPMTLNELQK---------------LVSSGNNND-EEQGYVLTNASKLLL 82 (209)
Q Consensus 48 g~~~t~~eLA~---------------L~~~g~~e~-~~~~y~~t~~s~~l~ 82 (209)
+++++..+||+ |...|+++. ....+.+|+.|+.+.
T Consensus 18 ~~~~~~~~lA~~l~vs~~tvs~~l~~Le~~GlV~r~~~~~i~LT~~G~~~~ 68 (214)
T 3hrs_A 18 HNKITNKEIAQLMQVSPPAVTEMMKKLLAEELLIKDKKAGYLLTDLGLKLV 68 (214)
T ss_dssp CSCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTTEEEECHHHHHHH
T ss_pred CCCcCHHHHHHHHCCChhHHHHHHHHHHHCCCEEEecCCCeEECHHHHHHH
Confidence 47899999999 778898653 336789999997554
No 455
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=35.72 E-value=39 Score=27.13 Aligned_cols=42 Identities=12% Similarity=-0.009 Sum_probs=31.6
Q ss_pred CCCeEEEecCCc-cHHHHHHHHHC-CCCeEEEeec-hHHHhhccc
Q 046346 143 GLNSLVDVGGGT-GTAAKAIAKAF-PKLECTCFDL-PHVVNGLES 184 (209)
Q Consensus 143 ~~~~vlDvGgG~-G~~~~~l~~~~-P~l~~~~~Dl-p~v~~~a~~ 184 (209)
...+||-+|+|. |.++..+++.. |+.++++.|. ++-.+.+++
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE 214 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH
Confidence 568899999765 88888888875 6789999986 555555553
No 456
>2p0y_A Hypothetical protein LP_0780; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 3.00A {Lactobacillus plantarum}
Probab=35.60 E-value=21 Score=29.38 Aligned_cols=28 Identities=25% Similarity=0.420 Sum_probs=18.8
Q ss_pred CCCeEEEecCCccHH--HHHHHHHCCCCeE
Q 046346 143 GLNSLVDVGGGTGTA--AKAIAKAFPKLEC 170 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~--~~~l~~~~P~l~~ 170 (209)
...+||-+|||+|.. +..|.+...++++
T Consensus 9 ~~~kIVvigGGtGl~~ll~gLk~~~~~iTa 38 (341)
T 2p0y_A 9 QRPKIVVIGGGTGLPVVLNGLRKQAVDITA 38 (341)
T ss_dssp -CCEEEEECCGGGHHHHHHHHHHSSSEEEE
T ss_pred CCCeEEEECCcccHHHHHHHHHhCCCCeEE
Confidence 346899999999954 4456555455654
No 457
>2jt1_A PEFI protein; solution structure, winged helix-turn-helix, transcripti regulatory protein, structural genomics, PSI-2; NMR {Salmonella typhimurium LT2}
Probab=35.45 E-value=9.8 Score=24.11 Aligned_cols=19 Identities=21% Similarity=0.559 Sum_probs=13.4
Q ss_pred chhHhhhC-----CCCCCHHHHHH
Q 046346 40 IPDIINKH-----GKPMTLNELQK 58 (209)
Q Consensus 40 lfd~L~~~-----g~~~t~~eLA~ 58 (209)
|++.|... |+|.|+.|||+
T Consensus 9 IL~~I~~~i~~~~g~~psv~EIa~ 32 (77)
T 2jt1_A 9 IISIVQERQNMDDGAPVKTRDIAD 32 (77)
T ss_dssp HHHHHHHHHHHHTTSCEEHHHHHH
T ss_pred HHHHHHHHHhhccCCCcCHHHHHH
Confidence 44555444 67889999998
No 458
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=35.32 E-value=45 Score=27.20 Aligned_cols=33 Identities=12% Similarity=0.180 Sum_probs=28.5
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec
Q 046346 143 GLNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL 175 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl 175 (209)
....|+-||||.+-++.++.-+..+.+++++|.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~ 57 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYER 57 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeC
Confidence 346899999999999988777777899999997
No 459
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=35.22 E-value=39 Score=28.28 Aligned_cols=31 Identities=13% Similarity=0.283 Sum_probs=25.0
Q ss_pred eEEEecCCccHHHHH--HHHHCCCCeEEEeech
Q 046346 146 SLVDVGGGTGTAAKA--IAKAFPKLECTCFDLP 176 (209)
Q Consensus 146 ~vlDvGgG~G~~~~~--l~~~~P~l~~~~~Dlp 176 (209)
.|+-||||.+.++.+ +++..|+.+++++|..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~ 34 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADHPDADVTAYEMN 34 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTCEEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhhCcCCcEEEEECC
Confidence 588999999877654 6667789999999973
No 460
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=35.10 E-value=31 Score=28.80 Aligned_cols=32 Identities=25% Similarity=0.208 Sum_probs=24.6
Q ss_pred CCeEEEecCCccHHHHHHHHHC---CCCeEEEeec
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAF---PKLECTCFDL 175 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~---P~l~~~~~Dl 175 (209)
..+||-||||.+.++.+..-+. ++.+++++|.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~ 38 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISA 38 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECS
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeC
Confidence 4689999999988766543333 7899999986
No 461
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=35.05 E-value=57 Score=26.45 Aligned_cols=44 Identities=20% Similarity=0.172 Sum_probs=32.8
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhhccc
Q 046346 141 FEGLNSLVDVGGGT-GTAAKAIAKAFPKLECTCFDL-PHVVNGLES 184 (209)
Q Consensus 141 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~ 184 (209)
.....+||.+|+|. |.++..+++..---++++.|. ++-.+.+++
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~ 233 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ 233 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 45568999999876 899999999874446888886 555565554
No 462
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=34.96 E-value=27 Score=30.05 Aligned_cols=33 Identities=36% Similarity=0.465 Sum_probs=25.6
Q ss_pred CCeEEEecCCccHHHHHHHHHC------------CCCeEEEeech
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAF------------PKLECTCFDLP 176 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~------------P~l~~~~~Dlp 176 (209)
...|+-||||++-++.++.-+. ++++++++|.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~ 51 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESP 51 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCC
Confidence 4689999999987777644443 78999999963
No 463
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=34.86 E-value=30 Score=29.79 Aligned_cols=32 Identities=28% Similarity=0.393 Sum_probs=24.9
Q ss_pred CCeEEEecCCccHHHHHH--HHHC-CCCeEEEeec
Q 046346 144 LNSLVDVGGGTGTAAKAI--AKAF-PKLECTCFDL 175 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l--~~~~-P~l~~~~~Dl 175 (209)
...|+-||||..-.+.++ ++.+ ++++++++|.
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~ 39 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIES 39 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECC
Confidence 467999999998777654 4434 7899999996
No 464
>2fsw_A PG_0823 protein; alpha-beta structure, helix-turn-helix, winged-helix-turn-HE structural genomics, PSI, protein structure initiative; HET: MSE; 2.16A {Porphyromonas gingivalis} SCOP: a.4.5.69
Probab=34.53 E-value=11 Score=24.91 Aligned_cols=67 Identities=12% Similarity=-0.013 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC--chhHhhhCCC-CCCHHHHHH----HHhCCCCCC----CC---CceecCHhhh
Q 046346 14 EAQIHVWNHIFNFINSMTLKCSIQLG--IPDIINKHGK-PMTLNELQK----LVSSGNNND----EE---QGYVLTNASK 79 (209)
Q Consensus 14 ~~~~~l~~~~~g~~~~~~l~~a~~lg--lfd~L~~~g~-~~t~~eLA~----L~~~g~~e~----~~---~~y~~t~~s~ 79 (209)
-+...+++++.+.+....|....+ | =|..|.+. - .++...|+. |...|+++. .+ -.|.+|+.|+
T Consensus 13 c~~~~~l~~l~~~~~~~IL~~L~~-~~~~~~eL~~~-l~gis~~~ls~~L~~Le~~GlV~r~~~~~d~r~~~y~LT~~G~ 90 (107)
T 2fsw_A 13 CPVRKSMQIFAGKWTLLIIFQINR-RIIRYGELKRA-IPGISEKMLIDELKFLCGKGLIKKKQYPEVPPRVEYSLTPLGE 90 (107)
T ss_dssp CHHHHHHHHHTSSSHHHHHHHHTT-SCEEHHHHHHH-STTCCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECHHHH
T ss_pred CCHHHHHHHHcCccHHHHHHHHHh-CCcCHHHHHHH-cccCCHHHHHHHHHHHHHCCCEEEeecCCCCCeeEEEECccHH
Confidence 356677777777776665554321 1 13333321 1 244444443 788898442 11 2599999986
Q ss_pred hhh
Q 046346 80 LLL 82 (209)
Q Consensus 80 ~l~ 82 (209)
.+.
T Consensus 91 ~l~ 93 (107)
T 2fsw_A 91 KVL 93 (107)
T ss_dssp TTH
T ss_pred HHH
Confidence 544
No 465
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=34.37 E-value=27 Score=30.35 Aligned_cols=16 Identities=31% Similarity=0.725 Sum_probs=12.5
Q ss_pred CCCeEEEecCCccHHH
Q 046346 143 GLNSLVDVGGGTGTAA 158 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~~ 158 (209)
+...|+|||||+=.+.
T Consensus 137 ~~~lviDIGGGStEl~ 152 (513)
T 1u6z_A 137 GRKLVIDIGGGSTELV 152 (513)
T ss_dssp SCEEEEEECSSCEEEE
T ss_pred CCEEEEEECCCcEEEE
Confidence 3579999999986554
No 466
>2htj_A P fimbrial regulatory protein KS71A; winged helix-turn-helix, PAP PILI, transcription activator; NMR {Escherichia coli} SCOP: a.4.5.73
Probab=34.35 E-value=21 Score=22.20 Aligned_cols=19 Identities=21% Similarity=0.378 Sum_probs=14.8
Q ss_pred CchhHhhhCCCCCCHHHHHH
Q 046346 39 GIPDIINKHGKPMTLNELQK 58 (209)
Q Consensus 39 glfd~L~~~g~~~t~~eLA~ 58 (209)
.|++.|... ++.|..|||+
T Consensus 4 ~Il~~L~~~-~~~s~~eLa~ 22 (81)
T 2htj_A 4 EILEFLNRH-NGGKTAEIAE 22 (81)
T ss_dssp HHHHHHHHS-CCCCHHHHHH
T ss_pred HHHHHHHHc-CCCCHHHHHH
Confidence 466677665 6899999999
No 467
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=34.34 E-value=29 Score=27.11 Aligned_cols=30 Identities=13% Similarity=0.214 Sum_probs=22.4
Q ss_pred eEEEecCCccHHHHHHHHHCCCCeEEEeec
Q 046346 146 SLVDVGGGTGTAAKAIAKAFPKLECTCFDL 175 (209)
Q Consensus 146 ~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl 175 (209)
-|+-||+|++-++.++.-+.-+++++++|.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~ 37 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDN 37 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeC
Confidence 489999999988776543334678888884
No 468
>3oop_A LIN2960 protein; protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG, unknown function; 1.78A {Listeria innocua}
Probab=34.33 E-value=19 Score=24.62 Aligned_cols=48 Identities=17% Similarity=0.168 Sum_probs=33.1
Q ss_pred HHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCC----CC---CceecCHhhhhhhc
Q 046346 35 SIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNND----EE---QGYVLTNASKLLLK 83 (209)
Q Consensus 35 a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~----~~---~~y~~t~~s~~l~~ 83 (209)
..++.++..|... +++|..+||+ |...|++++ .+ -.+.+|+.|+.+..
T Consensus 37 ~~~~~iL~~l~~~-~~~t~~eLa~~l~~~~~~vs~~l~~L~~~Glv~r~~~~~D~R~~~~~LT~~G~~~~~ 106 (143)
T 3oop_A 37 PEQWSVLEGIEAN-EPISQKEIALWTKKDTPTVNRIVDVLLRKELIVREISTEDRRISLLSLTDKGRKETT 106 (143)
T ss_dssp HHHHHHHHHHHHH-SSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC----CCSCEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHHc-CCcCHHHHHHHHCCCHhhHHHHHHHHHHCCCeeccCCCccCceeeeeECHHHHHHHH
Confidence 3455567777765 6899999999 778898442 12 24789999976553
No 469
>3u2r_A Regulatory protein MARR; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, helix-turn-helix; 2.20A {Planctomyces limnophilus}
Probab=34.17 E-value=8.7 Score=27.46 Aligned_cols=48 Identities=23% Similarity=0.194 Sum_probs=32.6
Q ss_pred HHcCchhHhhhC-CCCCCHHHHHH---------------HHhCCCCCC----CCC---ceecCHhhhhhhc
Q 046346 36 IQLGIPDIINKH-GKPMTLNELQK---------------LVSSGNNND----EEQ---GYVLTNASKLLLK 83 (209)
Q Consensus 36 ~~lglfd~L~~~-g~~~t~~eLA~---------------L~~~g~~e~----~~~---~y~~t~~s~~l~~ 83 (209)
.++.|+..|... ++++|..+||+ |...|+++. .+. .+.+|+.|+.+..
T Consensus 47 ~q~~vL~~l~~~~~~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~DrR~~~l~LT~~G~~~~~ 117 (168)
T 3u2r_A 47 QQYNTLRLLRSVHPEGMATLQIADRLISRAPDITRLIDRLDDRGLVLRTRKPENRRVVEVALTDAGLKLLK 117 (168)
T ss_dssp HHHHHHHHHHHHTTSCEEHHHHHHHC---CTHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcCHHHHHHHHCCChhhHHHHHHHHHHCCCEeecCCCCCCCeeEeEECHHHHHHHH
Confidence 345567777764 25899999999 778888542 122 4788988875553
No 470
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=34.14 E-value=58 Score=26.69 Aligned_cols=45 Identities=22% Similarity=0.211 Sum_probs=33.6
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhhcccC
Q 046346 141 FEGLNSLVDVGGGT-GTAAKAIAKAFPKLECTCFDL-PHVVNGLESD 185 (209)
Q Consensus 141 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~ 185 (209)
+....+||-+|+|. |.++.++++..---++++.|. ++-.+.++++
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l 229 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ 229 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc
Confidence 45667888899766 899999999875447888887 5556666643
No 471
>3f3x_A Transcriptional regulator, MARR family, putative; DNA binding protein, DNA-binding, transcription regulation; 1.90A {Sulfolobus solfataricus}
Probab=34.03 E-value=11 Score=26.08 Aligned_cols=46 Identities=13% Similarity=0.162 Sum_probs=32.4
Q ss_pred HHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCC--CC-C----ceecCHhhhhhhc
Q 046346 36 IQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNND--EE-Q----GYVLTNASKLLLK 83 (209)
Q Consensus 36 ~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~--~~-~----~y~~t~~s~~l~~ 83 (209)
.++.++..|... ++ |..+||+ |...|+++. ++ + .+.+|+.|+.+..
T Consensus 38 ~~~~iL~~l~~~-~~-~~~~la~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~LT~~G~~~~~ 105 (144)
T 3f3x_A 38 LDFSILKATSEE-PR-SMVYLANRYFVTQSAITAAVDKLEAKGLVRRIRDSKDRRIVIVEITPKGRQVLL 105 (144)
T ss_dssp HHHHHHHHHHHS-CE-EHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHC-CC-CHHHHHHHHCCChhHHHHHHHHHHHCCCEEeccCCCCCceEEEEECHHHHHHHH
Confidence 455678888775 45 9999999 778898442 11 2 4899999976554
No 472
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=33.98 E-value=1.1e+02 Score=24.45 Aligned_cols=64 Identities=22% Similarity=0.266 Sum_probs=40.0
Q ss_pred CCCeEEEecCCcc--HHHHHHHHHCCCCeEEEeechH-HHhhccc----CCCCeEEEEccCCCCCCCCcEEEe
Q 046346 143 GLNSLVDVGGGTG--TAAKAIAKAFPKLECTCFDLPH-VVNGLES----DLVNLKYVGGDMFKAISPADAVVL 208 (209)
Q Consensus 143 ~~~~vlDvGgG~G--~~~~~l~~~~P~l~~~~~Dlp~-v~~~a~~----~~~ri~~~~gD~~~~~p~~D~~~l 208 (209)
...+|.-||+|+. .++..++.+..-...+++|+.+ ....+.+ ...+++. ..|+ +.+..+|++++
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~-t~d~-~~l~~aD~Vi~ 83 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEI-SKDL-SASAHSKVVIF 83 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEE-ESCG-GGGTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEE-eCCH-HHHCCCCEEEE
Confidence 3468999999862 3555666666544799999854 2222221 2347766 4776 77778999875
No 473
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=33.93 E-value=1.1e+02 Score=22.96 Aligned_cols=54 Identities=13% Similarity=0.115 Sum_probs=32.5
Q ss_pred CCeEEEecCCccHHHHHHHHHC---CCCeEEEeech-HHHhh----cccCCCCeEEEEccCCC
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAF---PKLECTCFDLP-HVVNG----LESDLVNLKYVGGDMFK 198 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~---P~l~~~~~Dlp-~v~~~----a~~~~~ri~~~~gD~~~ 198 (209)
.+++| |=||+|.++.++++++ .+.++++.++. +-.+. .+....++.++.+|+.+
T Consensus 4 ~k~vl-ITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~ 65 (276)
T 1wma_A 4 IHVAL-VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD 65 (276)
T ss_dssp CCEEE-ESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTC
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCC
Confidence 34555 4456677777776654 34678888873 22221 11134678888999875
No 474
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=33.87 E-value=32 Score=28.55 Aligned_cols=31 Identities=32% Similarity=0.533 Sum_probs=24.5
Q ss_pred CeEEEecCCccHHHHH--HHHHCCCCeEEEeec
Q 046346 145 NSLVDVGGGTGTAAKA--IAKAFPKLECTCFDL 175 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~--l~~~~P~l~~~~~Dl 175 (209)
.+|+-||||.+.++.+ |++..++.+++++|.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~ 35 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISD 35 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECC
Confidence 5799999999887665 444348899999996
No 475
>4a5n_A Uncharacterized HTH-type transcriptional regulato; activator, DNA binding, MARR-like; 1.81A {Bacillus subtilis} PDB: 4a5m_A
Probab=33.82 E-value=26 Score=24.48 Aligned_cols=67 Identities=18% Similarity=0.081 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC--chhHhhhCCCCCCHHHHHH----HHhCCCCCCC-------CCceecCHhhhhh
Q 046346 15 AQIHVWNHIFNFINSMTLKCSIQLG--IPDIINKHGKPMTLNELQK----LVSSGNNNDE-------EQGYVLTNASKLL 81 (209)
Q Consensus 15 ~~~~l~~~~~g~~~~~~l~~a~~lg--lfd~L~~~g~~~t~~eLA~----L~~~g~~e~~-------~~~y~~t~~s~~l 81 (209)
|....++++.+-|....|.... .| =|..|...=..+|...|+. |...|++++. .-.|.+|+.|+.|
T Consensus 15 pi~~~l~~lg~kW~l~IL~~L~-~g~~rf~eL~~~l~gIs~~~Ls~~L~~Le~~GLV~R~~~~~d~r~v~y~LT~~G~~l 93 (131)
T 4a5n_A 15 PVEFTLDVIGGKWKGILFYHMI-DGKKRFNEFRRICPSITQRMLTLQLRELEADGIVHREVYHQVPPKVEYSLTEFGRTL 93 (131)
T ss_dssp HHHHHHHHHCSSSHHHHHHHHT-TSCBCHHHHHHHCTTSCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECTTGGGG
T ss_pred cHHHHHHHHcCcCHHHHHHHHh-cCCcCHHHHHHHhcccCHHHHHHHHHHHHHCCCEEEEecCCCCCeEEEEECHhHHHH
Confidence 5677777777777777665543 12 1333332101344444433 7788984421 1259999999766
Q ss_pred h
Q 046346 82 L 82 (209)
Q Consensus 82 ~ 82 (209)
.
T Consensus 94 ~ 94 (131)
T 4a5n_A 94 E 94 (131)
T ss_dssp H
T ss_pred H
Confidence 5
No 476
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=33.69 E-value=29 Score=27.96 Aligned_cols=15 Identities=27% Similarity=0.534 Sum_probs=11.5
Q ss_pred CCCeEEEecCCccHH
Q 046346 143 GLNSLVDVGGGTGTA 157 (209)
Q Consensus 143 ~~~~vlDvGgG~G~~ 157 (209)
....++|||||+=.+
T Consensus 131 ~~~lviDIGGGStEl 145 (315)
T 3mdq_A 131 HISLAMDIGGGSVEF 145 (315)
T ss_dssp CCEEEEEECSSCEEE
T ss_pred CCEEEEEeCCCceEE
Confidence 457899999997543
No 477
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=33.44 E-value=34 Score=29.42 Aligned_cols=32 Identities=13% Similarity=0.088 Sum_probs=24.9
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEeec
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL 175 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl 175 (209)
-.+||-||||.|.+..+-.-+..+.+++++|.
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~ 73 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISP 73 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEES
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECC
Confidence 46899999999987765444456778999995
No 478
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=33.35 E-value=28 Score=28.65 Aligned_cols=31 Identities=16% Similarity=0.265 Sum_probs=23.9
Q ss_pred CeEEEecCCccHHHHHH--HH-HCCCCeEEEeec
Q 046346 145 NSLVDVGGGTGTAAKAI--AK-AFPKLECTCFDL 175 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~l--~~-~~P~l~~~~~Dl 175 (209)
.+|+-||||.+.++.+. ++ ..++.+++++|.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~ 35 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINK 35 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeC
Confidence 47999999998876654 44 337889999986
No 479
>1r1u_A CZRA, repressor protein; zinc, DNA binding, transcriptional regulation, winged HTH protein, transcription repressor; 2.00A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 1r1v_A 2kjb_A 2kjc_A
Probab=33.18 E-value=14 Score=24.44 Aligned_cols=47 Identities=13% Similarity=0.138 Sum_probs=30.4
Q ss_pred HHHHHHHHcCchhHhhhCCCCCCHHHHHH---------------HHhCCCCCC-CCC---ceecCHhh
Q 046346 30 MTLKCSIQLGIPDIINKHGKPMTLNELQK---------------LVSSGNNND-EEQ---GYVLTNAS 78 (209)
Q Consensus 30 ~~l~~a~~lglfd~L~~~g~~~t~~eLA~---------------L~~~g~~e~-~~~---~y~~t~~s 78 (209)
.++.--.++.|+..|.. ++.|+.|||+ |...|+++. ..| .|.+++..
T Consensus 21 ~~l~~~~r~~IL~~L~~--~~~~~~ela~~l~is~stvs~~L~~L~~~Glv~~~~~gr~~~y~l~~~~ 86 (106)
T 1r1u_A 21 KALGDYNRIRIMELLSV--SEASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDDIH 86 (106)
T ss_dssp HHTCSHHHHHHHHHHHH--CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEESSHH
T ss_pred HHhCCHHHHHHHHHHHh--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEeCCEEEEEEChHH
Confidence 33444456677777774 6899999999 667887431 122 46777654
No 480
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=33.12 E-value=51 Score=26.42 Aligned_cols=45 Identities=18% Similarity=0.155 Sum_probs=34.5
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhhcccC
Q 046346 141 FEGLNSLVDVGGGT-GTAAKAIAKAFPKLECTCFDL-PHVVNGLESD 185 (209)
Q Consensus 141 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~ 185 (209)
.....+|+-+|+|. |.++..+++.....++++.|. ++-.+.++++
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l 215 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV 215 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc
Confidence 45567888888765 899999999987789999987 5556655543
No 481
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=32.95 E-value=39 Score=27.57 Aligned_cols=33 Identities=12% Similarity=0.228 Sum_probs=27.3
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEeech
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAFPKLECTCFDLP 176 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp 176 (209)
...|+-||||.+-++.++.-+..+.+++++|..
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~ 37 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERS 37 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecC
Confidence 458999999999888887666668899999973
No 482
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=32.80 E-value=98 Score=24.39 Aligned_cols=63 Identities=16% Similarity=0.225 Sum_probs=38.1
Q ss_pred CCeEEEecCCccHHHHHHHHHC--CCCeEEEeechH--HHhhccc--CCCCeEEEEccCCCC-CCCCcEEE
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAF--PKLECTCFDLPH--VVNGLES--DLVNLKYVGGDMFKA-ISPADAVV 207 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~--P~l~~~~~Dlp~--v~~~a~~--~~~ri~~~~gD~~~~-~p~~D~~~ 207 (209)
..+||-. ||+|.++..++++. .+.+++++++.. ..+.... ...+++++.+|+.++ +...|+++
T Consensus 27 ~~~vlVt-GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi 96 (343)
T 2b69_A 27 RKRILIT-GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIY 96 (343)
T ss_dssp CCEEEEE-TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEE
T ss_pred CCEEEEE-cCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChhhcCCCEEE
Confidence 4566655 55677777666554 245788888631 1111111 135799999999874 44478775
No 483
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=32.77 E-value=72 Score=24.24 Aligned_cols=54 Identities=15% Similarity=0.046 Sum_probs=31.2
Q ss_pred CCeEEEecCCccHHHHHHHHHC--CCCeEEEeech-HHHh-hcccCCCCeEEEEccCCC
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAF--PKLECTCFDLP-HVVN-GLESDLVNLKYVGGDMFK 198 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~--P~l~~~~~Dlp-~v~~-~a~~~~~ri~~~~gD~~~ 198 (209)
.+++|-.||+ |.++.++++++ -+.++++.|+. +..+ .+.+...++.++.+|+.+
T Consensus 8 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~ 65 (259)
T 4e6p_A 8 GKSALITGSA-RGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTR 65 (259)
T ss_dssp TCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTC
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCC
Confidence 3566666655 44454444443 25678888873 2222 222245678888888875
No 484
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=32.57 E-value=32 Score=27.52 Aligned_cols=32 Identities=19% Similarity=0.400 Sum_probs=25.2
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEeec
Q 046346 144 LNSLVDVGGGTGTAAKAIAKAFPKLECTCFDL 175 (209)
Q Consensus 144 ~~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl 175 (209)
...|+-||||.+-++.++.-+..+.+++++|.
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~ 45 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIES 45 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEec
Confidence 35799999999988877655556788888885
No 485
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=32.53 E-value=95 Score=26.35 Aligned_cols=74 Identities=16% Similarity=0.240 Sum_probs=41.5
Q ss_pred HHHHhccccccCCCeEEEecCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhhcccCCCCeEEEEccCCCC-------CCC
Q 046346 132 VMIQKCKNVFEGLNSLVDVGGGT-GTAAKAIAKAFPKLECTCFDL-PHVVNGLESDLVNLKYVGGDMFKA-------ISP 202 (209)
Q Consensus 132 ~~~~~~~~~~~~~~~vlDvGgG~-G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~~~ri~~~~gD~~~~-------~p~ 202 (209)
.+.+.+...-...++++=+|||. |..+...++.. .++.+.+. ++.++...+..++..++.||..++ ...
T Consensus 223 ~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~~~--~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~ 300 (461)
T 4g65_A 223 SVMSELQRLEKPYRRIMIVGGGNIGASLAKRLEQT--YSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQ 300 (461)
T ss_dssp HHHHHTTGGGSCCCEEEEECCSHHHHHHHHHHTTT--SEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGG
T ss_pred HHHHhhccccccccEEEEEcchHHHHHHHHHhhhc--CceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchh
Confidence 33444432224568899999886 34344444433 45556665 333433332446788999998872 223
Q ss_pred CcEEE
Q 046346 203 ADAVV 207 (209)
Q Consensus 203 ~D~~~ 207 (209)
+|+++
T Consensus 301 ~D~~i 305 (461)
T 4g65_A 301 VDVFI 305 (461)
T ss_dssp CSEEE
T ss_pred hcEEE
Confidence 77765
No 486
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=32.46 E-value=44 Score=28.76 Aligned_cols=31 Identities=19% Similarity=0.297 Sum_probs=25.8
Q ss_pred CeEEEecCCccHHHH--HHHHHCCCCeEEEeec
Q 046346 145 NSLVDVGGGTGTAAK--AIAKAFPKLECTCFDL 175 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~--~l~~~~P~l~~~~~Dl 175 (209)
.+|+-||||.+.++. .|+++.|+.+++++|.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~ 34 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFER 34 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEEC
Confidence 579999999887666 4677788999999996
No 487
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=32.43 E-value=62 Score=23.73 Aligned_cols=60 Identities=22% Similarity=0.222 Sum_probs=37.1
Q ss_pred CeEEEecCCccHHHHHHHHHC--CCCeEEEeechHHHhhcccCCCCeEEEEccCCCC------CCCCcEEE
Q 046346 145 NSLVDVGGGTGTAAKAIAKAF--PKLECTCFDLPHVVNGLESDLVNLKYVGGDMFKA------ISPADAVV 207 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~l~~~~--P~l~~~~~Dlp~v~~~a~~~~~ri~~~~gD~~~~------~p~~D~~~ 207 (209)
.+|+-. ||+|.++..++++. .+.+++++++... .......+++++.+|+.++ +..+|+++
T Consensus 5 ~~ilIt-GatG~iG~~l~~~L~~~g~~V~~~~r~~~--~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 72 (227)
T 3dhn_A 5 KKIVLI-GASGFVGSALLNEALNRGFEVTAVVRHPE--KIKIENEHLKVKKADVSSLDEVCEVCKGADAVI 72 (227)
T ss_dssp CEEEEE-TCCHHHHHHHHHHHHTTTCEEEEECSCGG--GCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEE
T ss_pred CEEEEE-cCCchHHHHHHHHHHHCCCEEEEEEcCcc--cchhccCceEEEEecCCCHHHHHHHhcCCCEEE
Confidence 455544 56677777666654 2367888888422 1122347899999999862 22367665
No 488
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=32.02 E-value=42 Score=27.40 Aligned_cols=32 Identities=9% Similarity=0.124 Sum_probs=26.8
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEeech
Q 046346 145 NSLVDVGGGTGTAAKAIAKAFPKLECTCFDLP 176 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp 176 (209)
..|+-||||.+-.+.++.-+-.+.+++++|..
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~ 37 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQ 37 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCC
Confidence 47899999999988887666678899999973
No 489
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=32.01 E-value=76 Score=23.99 Aligned_cols=53 Identities=21% Similarity=0.078 Sum_probs=31.8
Q ss_pred CCeEEEecCCccH---HHHHHHHHCCCCeEEEeech-HHHhh-cccCCCCeEEEEccCCC
Q 046346 144 LNSLVDVGGGTGT---AAKAIAKAFPKLECTCFDLP-HVVNG-LESDLVNLKYVGGDMFK 198 (209)
Q Consensus 144 ~~~vlDvGgG~G~---~~~~l~~~~P~l~~~~~Dlp-~v~~~-a~~~~~ri~~~~gD~~~ 198 (209)
.+++|-.|++.|. ++..|+++ +.++++.|+. +-++. +++...++.++.+|+.+
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~ 66 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFAKG--GAKVVIVDRDKAGAERVAGEIGDAALAVAADISK 66 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTS
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCC
Confidence 4567777766542 33344444 5678888883 22222 22345678888888875
No 490
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=31.74 E-value=34 Score=29.02 Aligned_cols=31 Identities=23% Similarity=0.251 Sum_probs=25.5
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEeec
Q 046346 145 NSLVDVGGGTGTAAKAIAKAFPKLECTCFDL 175 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl 175 (209)
..|+-||||.+-++.+..-+-.+.+++++|.
T Consensus 12 ~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~ 42 (479)
T 2hqm_A 12 YDYLVIGGGSGGVASARRAASYGAKTLLVEA 42 (479)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSCCEEEEES
T ss_pred CCEEEEcCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 5799999999988877655556889999995
No 491
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=31.70 E-value=47 Score=27.68 Aligned_cols=30 Identities=13% Similarity=0.326 Sum_probs=24.4
Q ss_pred eEEEecCCccHHHHH--HHHHCCCCeEEEeec
Q 046346 146 SLVDVGGGTGTAAKA--IAKAFPKLECTCFDL 175 (209)
Q Consensus 146 ~vlDvGgG~G~~~~~--l~~~~P~l~~~~~Dl 175 (209)
.|+-||+|.+.+..+ +++..|+.+++++|.
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~ 33 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEK 33 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTSEEEEEES
T ss_pred eEEEECCCHHHHHHHHHHHHhCcCCeEEEEEC
Confidence 588999999887654 566678999999986
No 492
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=31.63 E-value=36 Score=26.74 Aligned_cols=31 Identities=16% Similarity=0.158 Sum_probs=23.8
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEeec
Q 046346 145 NSLVDVGGGTGTAAKAIAKAFPKLECTCFDL 175 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl 175 (209)
..|+-||||.+-++.+..-+..+.+++++|.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 36 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRGLSFRFVDP 36 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeC
Confidence 4789999999988776544445778888885
No 493
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=31.61 E-value=34 Score=28.84 Aligned_cols=31 Identities=26% Similarity=0.289 Sum_probs=25.7
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEeec
Q 046346 145 NSLVDVGGGTGTAAKAIAKAFPKLECTCFDL 175 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl 175 (209)
..|+-||||.+-++.+..-+.++.+++++|.
T Consensus 5 ~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~ 35 (463)
T 2r9z_A 5 FDLIAIGGGSGGLAVAEKAAAFGKRVALIES 35 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEcC
Confidence 4689999999998887655557899999996
No 494
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=31.36 E-value=60 Score=23.78 Aligned_cols=55 Identities=20% Similarity=0.187 Sum_probs=36.4
Q ss_pred ecCCccHHHHHHHHHCCC--CeEEEeechHHHhhcccCCCCeEEEEccCCC-C------CCCCcEEE
Q 046346 150 VGGGTGTAAKAIAKAFPK--LECTCFDLPHVVNGLESDLVNLKYVGGDMFK-A------ISPADAVV 207 (209)
Q Consensus 150 vGgG~G~~~~~l~~~~P~--l~~~~~Dlp~v~~~a~~~~~ri~~~~gD~~~-~------~p~~D~~~ 207 (209)
|=||+|.++..++++.-. .+++++++... ... ...+++++.+|+.+ + +...|+++
T Consensus 5 ItGatG~iG~~l~~~L~~~g~~V~~~~R~~~--~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi 68 (219)
T 3dqp_A 5 IVGSTGRVGKSLLKSLSTTDYQIYAGARKVE--QVP-QYNNVKAVHFDVDWTPEEMAKQLHGMDAII 68 (219)
T ss_dssp EESTTSHHHHHHHHHHTTSSCEEEEEESSGG--GSC-CCTTEEEEECCTTSCHHHHHTTTTTCSEEE
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEEECCcc--chh-hcCCceEEEecccCCHHHHHHHHcCCCEEE
Confidence 345778888888877643 57888888432 111 12789999999987 2 22367765
No 495
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=31.35 E-value=1e+02 Score=24.46 Aligned_cols=44 Identities=23% Similarity=0.134 Sum_probs=33.2
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhhcccC
Q 046346 141 FEGLNSLVDVGGGT-GTAAKAIAKAFPKLECTCFDL-PHVVNGLESD 185 (209)
Q Consensus 141 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~~ 185 (209)
.....+||-+|+|. |.++..+++..- .++++.|. ++-.+.++++
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~l 209 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMG-LRVAAVDIDDAKLNLARRL 209 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHc
Confidence 45567888898765 999999999874 59999987 5556666543
No 496
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=31.21 E-value=43 Score=28.64 Aligned_cols=32 Identities=22% Similarity=0.272 Sum_probs=27.4
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEeech
Q 046346 145 NSLVDVGGGTGTAAKAIAKAFPKLECTCFDLP 176 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dlp 176 (209)
..|+-||||.+-++.++.-+..+++++++|..
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~ 39 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLERE 39 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccC
Confidence 57999999999998887777778999999974
No 497
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=31.06 E-value=1.5e+02 Score=22.43 Aligned_cols=53 Identities=17% Similarity=0.141 Sum_probs=32.2
Q ss_pred CCeEEEecC-CccH---HHHHHHHHCCCCeEEEeech-HHHhh----ccc-CCCCeEEEEccCCC
Q 046346 144 LNSLVDVGG-GTGT---AAKAIAKAFPKLECTCFDLP-HVVNG----LES-DLVNLKYVGGDMFK 198 (209)
Q Consensus 144 ~~~vlDvGg-G~G~---~~~~l~~~~P~l~~~~~Dlp-~v~~~----a~~-~~~ri~~~~gD~~~ 198 (209)
.+++|-.|| |+|. ++..|+++ +.++++.|+. +..+. .++ ...++.++.+|+.+
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~ 84 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLE--GADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTS 84 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTC
T ss_pred CCEEEEECCCCCchHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCC
Confidence 467888887 4443 33445555 5678888872 22222 111 23689999999876
No 498
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=30.92 E-value=26 Score=29.81 Aligned_cols=32 Identities=28% Similarity=0.273 Sum_probs=24.4
Q ss_pred CeEEEecCCccHHHHHHHHHC---CCCeEEEeech
Q 046346 145 NSLVDVGGGTGTAAKAIAKAF---PKLECTCFDLP 176 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~l~~~~---P~l~~~~~Dlp 176 (209)
..|+-||||..-.+.++.-+- ++++++++|..
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~ 37 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESG 37 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC-
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecC
Confidence 468999999988777654444 78899999974
No 499
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=30.73 E-value=91 Score=25.34 Aligned_cols=43 Identities=16% Similarity=0.108 Sum_probs=31.5
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhhccc
Q 046346 141 FEGLNSLVDVGGGT-GTAAKAIAKAFPKLECTCFDL-PHVVNGLES 184 (209)
Q Consensus 141 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~l~~~~~Dl-p~v~~~a~~ 184 (209)
.....+||-+|+|. |.++..+++.. +.++++.|. ++-.+.+++
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKA 236 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH
Confidence 55668888899875 88899999886 567888886 555555543
No 500
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=30.67 E-value=39 Score=26.16 Aligned_cols=31 Identities=19% Similarity=0.102 Sum_probs=24.4
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEeec
Q 046346 145 NSLVDVGGGTGTAAKAIAKAFPKLECTCFDL 175 (209)
Q Consensus 145 ~~vlDvGgG~G~~~~~l~~~~P~l~~~~~Dl 175 (209)
..|+-||||.+-++.++.-+--+.+++++|.
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 46 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGE 46 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEec
Confidence 5899999999988776554444778899986
Done!