Query 046361
Match_columns 539
No_of_seqs 282 out of 2228
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 19:55:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046361.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046361hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 1.3E-88 4.5E-93 731.5 49.8 503 27-533 3-517 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 1.6E-85 5.5E-90 706.0 49.0 486 30-529 1-494 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 4.8E-81 1.6E-85 676.7 45.3 491 25-532 5-499 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 2.8E-74 9.5E-79 617.5 39.5 455 30-530 2-473 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 3.8E-71 1.3E-75 595.7 38.0 449 45-528 8-501 (501)
6 2wdx_A Putative hexose oxidase 100.0 5E-68 1.7E-72 575.7 40.3 456 31-528 23-523 (523)
7 2ipi_A Aclacinomycin oxidoredu 100.0 1.2E-66 3.9E-71 565.2 43.3 460 27-529 17-520 (521)
8 2y3s_A TAML; oxidoreductase; H 100.0 2.4E-66 8.3E-71 562.9 41.8 447 48-530 36-529 (530)
9 1zr6_A Glucooligosaccharide ox 100.0 3.3E-66 1.1E-70 559.7 40.0 457 27-530 5-480 (503)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 1.2E-63 4.2E-68 534.9 36.9 432 46-528 13-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 3.1E-41 1E-45 367.7 34.1 222 27-267 30-263 (534)
12 2exr_A Cytokinin dehydrogenase 100.0 1E-33 3.6E-38 307.0 36.3 199 68-273 53-262 (524)
13 4bby_A Alkyldihydroxyacetoneph 100.0 2.8E-34 9.6E-39 319.4 22.2 204 69-273 198-408 (658)
14 4feh_A Oxidoreductase DPRE1; a 100.0 3.8E-32 1.3E-36 291.0 33.0 197 68-275 35-238 (481)
15 3pm9_A Putative oxidoreductase 100.0 1.2E-32 4E-37 294.8 21.1 205 67-275 42-253 (476)
16 2uuu_A Alkyldihydroxyacetoneph 100.0 5.2E-32 1.8E-36 296.1 19.7 201 73-274 134-339 (584)
17 1wvf_A 4-cresol dehydrogenase 100.0 6.4E-30 2.2E-34 277.6 23.2 198 74-277 54-268 (520)
18 1e8g_A Vanillyl-alcohol oxidas 100.0 1.8E-28 6.2E-33 268.0 23.8 200 73-277 67-300 (560)
19 2i0k_A Oxidoreductase; MIX alp 100.0 2.2E-29 7.7E-34 274.9 16.3 198 48-256 12-228 (561)
20 2vfr_A Xylitol oxidase, aldito 100.0 5.5E-29 1.9E-33 263.6 16.4 176 68-256 12-190 (422)
21 3js8_A Cholesterol oxidase; ch 100.0 1E-28 3.5E-33 264.6 16.8 181 68-253 21-221 (540)
22 1f0x_A DLDH, D-lactate dehydro 100.0 1.2E-28 4.2E-33 267.8 14.2 197 73-274 42-297 (571)
23 3tx1_A UDP-N-acetylenolpyruvoy 99.9 4.2E-25 1.4E-29 224.0 12.3 164 73-251 51-217 (322)
24 1hsk_A UDP-N-acetylenolpyruvoy 99.9 1.7E-24 5.7E-29 220.9 10.6 160 73-249 45-209 (326)
25 3i99_A UDP-N-acetylenolpyruvoy 99.9 7.6E-24 2.6E-28 217.0 12.7 165 73-251 27-199 (357)
26 1uxy_A MURB, uridine diphospho 99.9 2.3E-22 7.8E-27 205.4 16.0 164 74-251 12-183 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.8 2.9E-21 1E-25 190.6 8.7 152 75-250 21-173 (268)
28 2yvs_A Glycolate oxidase subun 99.8 4.7E-19 1.6E-23 169.9 10.2 116 136-259 1-124 (219)
29 1ffv_C CUTM, flavoprotein of c 98.1 2.8E-06 9.4E-11 84.6 6.9 156 76-249 4-177 (287)
30 1n62_C Carbon monoxide dehydro 97.4 0.00029 1E-08 69.9 7.8 155 76-249 4-177 (288)
31 2w3s_A Xanthine dehydrogenase; 97.1 0.00026 8.7E-09 74.9 3.9 153 79-248 179-345 (462)
32 1t3q_C Quinoline 2-oxidoreduct 93.7 0.081 2.8E-06 52.2 6.0 154 76-248 4-175 (288)
33 3nvz_B Xanthine dehydrogenase/ 93.7 0.095 3.3E-06 52.1 6.6 158 76-248 9-190 (305)
34 3hrd_C Nicotinate dehydrogenas 92.9 0.18 6E-06 49.9 7.0 78 77-158 3-82 (296)
35 2vfr_A Xylitol oxidase, aldito 91.9 0.12 4E-06 53.8 4.6 28 494-523 387-414 (422)
36 1rm6_B 4-hydroxybenzoyl-COA re 89.0 0.64 2.2E-05 46.4 6.7 77 76-159 5-84 (324)
37 1wvf_A 4-cresol dehydrogenase 85.1 1.1 3.8E-05 47.7 6.4 28 494-521 480-508 (520)
38 3unc_A Xanthine dehydrogenase/ 74.1 4.1 0.00014 48.3 6.8 79 76-161 232-313 (1332)
39 4bby_A Alkyldihydroxyacetoneph 72.6 1.7 5.9E-05 47.7 3.0 28 494-521 625-653 (658)
40 3pm9_A Putative oxidoreductase 53.3 16 0.00055 38.3 5.9 28 494-521 443-471 (476)
41 2i0k_A Oxidoreductase; MIX alp 49.6 7 0.00024 41.9 2.4 23 502-524 533-555 (561)
42 1e8g_A Vanillyl-alcohol oxidas 48.0 25 0.00086 37.5 6.5 21 502-522 523-543 (560)
43 3js8_A Cholesterol oxidase; ch 41.3 10 0.00035 40.4 2.0 23 501-523 511-533 (540)
44 1rzw_A Protein AF2095(GR4); be 35.1 49 0.0017 27.7 4.9 37 75-111 47-84 (123)
45 1wn2_A Peptidyl-tRNA hydrolase 33.5 67 0.0023 26.7 5.5 37 74-110 53-90 (121)
46 1xty_A PTH, peptidyl-tRNA hydr 33.0 70 0.0024 26.5 5.6 41 68-110 48-89 (120)
47 2zv3_A PTH, peptidyl-tRNA hydr 31.7 67 0.0023 26.4 5.2 37 74-110 47-84 (115)
48 1f0x_A DLDH, D-lactate dehydro 31.7 22 0.00075 38.2 2.7 22 501-523 536-557 (571)
49 3zyv_A AOH1; oxidoreductase, m 31.6 26 0.00088 41.7 3.5 80 78-162 241-321 (1335)
50 1rlk_A Hypothetical protein TA 31.3 68 0.0023 26.5 5.2 38 74-111 49-87 (117)
51 2uuu_A Alkyldihydroxyacetoneph 28.6 22 0.00076 38.2 2.1 27 495-521 552-579 (584)
52 2lnd_A De novo designed protei 25.5 73 0.0025 24.3 3.9 35 78-112 29-63 (112)
53 1q7s_A BIT1, protein CGI-147; 25.2 1.2E+02 0.0042 24.9 5.7 36 75-110 50-86 (117)
54 2g2c_A Putative molybdenum cof 21.1 1.5E+02 0.0052 25.7 5.9 39 77-115 46-84 (167)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=1.3e-88 Score=731.49 Aligned_cols=503 Identities=47% Similarity=0.902 Sum_probs=429.3
Q ss_pred ccccHHHHhhhcCCCCCCCce-eecCCCcChHHHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCeEEE
Q 046361 27 ILNNFIKCLTANSEVYIPFSN-FYTPNNPSFLSVLESSAQNLRYLVPSMPKPEFIFTPLTESHLQAAVICSRHLRIHLRA 105 (539)
Q Consensus 27 ~~~~~~~~l~~~~~~~~~~~~-v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v 105 (539)
++++|.+||+..+..+.++++ |++|+|+.|+.++.++.+|.||+.+....|.+||+|+|++||+++|++|+++++||++
T Consensus 3 ~~~~f~~c~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v 82 (518)
T 3vte_A 3 PRENFLKCFSKHIPNNVANPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIRT 82 (518)
T ss_dssp HHHHHHHHHHHHCCC----CCCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEEE
T ss_pred hhHHHHHHHHhcCCccCCCCceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEE
Confidence 457899999988777778888 9999999999998888999999998999999999999999999999999999999999
Q ss_pred EeCCCCCCCCccccCCCCCeEEEEcCCCCcEEEeCCCCEEEEeCCCCHHHHHHHHHhcCCceEeecCCCCcceeccccCC
Q 046361 106 RSGGHDYEGVSYVSQIETPFFLLDLAKLRSIEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITG 185 (539)
Q Consensus 106 ~ggGh~~~g~s~~~~~~~~~ivIdl~~l~~v~vd~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~~ 185 (539)
||||||+.|.+... ..++++|||++||+|++|+++++|+||||+++.+|+++|.++|+++.+++|.|+++||||++++
T Consensus 83 rggGh~~~g~~~~~--~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~g 160 (518)
T 3vte_A 83 RSGGHDAEGMSYIS--QVPFVVVDLRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSG 160 (518)
T ss_dssp ESSCCCTTCTTTCC--SSSEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHHT
T ss_pred ECCCcCCCCCccCC--CCCeEEEECCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeCC
Confidence 99999998877432 1268999999999999999999999999999999999999998789999999999999999999
Q ss_pred CccCCCcccccccccceeEEEEEccCCceecccCCCcchhhhhhcccCCCceEEEEEEEEEEeeCCeEEEEEEEecch-h
Q 046361 186 GGYGTMMRKYGLAADNVVDARIVDARGRILDREAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLE-Q 264 (539)
Q Consensus 186 gg~g~~s~~~G~~~d~v~~~~vV~~~G~i~~~~~~~~dLf~a~rG~~~g~~Givt~~~~k~~p~~~~~~~~~~~~~~~-~ 264 (539)
||+|+++++||+++|+|+++|||++||++++.+.+|+|||||+|||++|+|||||+++||++|.|+....|.+.+... +
T Consensus 161 Gg~G~~s~~~G~~~D~V~~~evV~adG~iv~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~ 240 (518)
T 3vte_A 161 GGYGALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIH 240 (518)
T ss_dssp CCCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHH
T ss_pred CCCccccCCCCchhheEEEEEEEccCCeEEEeeccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHH
Confidence 999999999999999999999999999999755568999999999855899999999999999999888888877654 5
Q ss_pred hHHHHHHHHHHHhhcCCccceEEEEEEeccCC---CCCCceeEEEEEEEEeCCHHHHHHHhhccCccCCCCcccccccch
Q 046361 265 GATEILYKWQQVADNLDEHLFIRVIIKLANTG---PKGKRTVTTSYNALFLGDAERLLQVMHKKFPELGLTRNDCIEKSW 341 (539)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 341 (539)
.+.+++..|+++++.+|+++++.+.+...++. ..+...+.+.+.++|+|+.+++.+.|.+.|++++....++.+++|
T Consensus 241 ~~~~~l~~~~~~~~~~p~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~w 320 (518)
T 3vte_A 241 GLVKLFNKWQNIAYKYDKDLVLMTHFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSW 320 (518)
T ss_dssp HHHHHHHHHHHHGGGSCTTEEEEEEEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEECH
T ss_pred HHHHHHHHHHHHHHcCCHhHeEEEEEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecch
Confidence 67889999999999999999998887652211 111123467788999999999998888878888766677889999
Q ss_pred HHHHHHHhcCCCC-CC---chhhhccccccccccccccccccCCCCHHHHHHHHHHHHcC--CCceEEEeecCCCCCCCC
Q 046361 342 IKSVLYIAGYPNY-TE---PEILLEERSLFKSYFKAKSDFVKEPIAETVLEGLWEMLLEG--HDPEMIWNPYGGMMSKIS 415 (539)
Q Consensus 342 ~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~~~--~~~~i~~~~~GG~v~~v~ 415 (539)
++.+.+++.++.+ .+ ++.+.++....+.+||.||+|+.+++++++|+.+++++.+. +.+.++++++||++++++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~GGa~~~v~ 400 (518)
T 3vte_A 321 IDTTIFYSGVVNFNTANFKKEILLDRSAGKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGIMEEIS 400 (518)
T ss_dssp HHHHHHTSSSCCC-----CGGGGGCTTCSCCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECCGGGGTSC
T ss_pred hhhhhhhhcCCccCCccchhhhhccCCcCcccceeeechhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecCccccCCC
Confidence 9988887765433 23 34444443334457889999998899999999999988763 357899999999999999
Q ss_pred CCCCCCcccCCCeEEEEEEcccCCCCChhhHHHHHHHHHHHHhhcCcccCCCCcccccccCcccc-CCCCCCchhhhhhh
Q 046361 416 EYEIPFPHRKGNLFKIQYLTGWKDGDNRTATKHIEGIRRIYDYMAPYVSMFPRAAYVNYRDLDLG-MNKKCNTSYIEAAT 494 (539)
Q Consensus 416 ~~~tAfp~R~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Y~Ny~d~~~~-~~~~~~~~~~~~~~ 494 (539)
.++||||||++.+|.+++.+.|.++ +.++++.+|++++++.|.|+.+..+.|+|+||+|.+++ .+..++.++..+..
T Consensus 401 ~~~TAf~hR~~~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~~~~~~~~~~~ 478 (518)
T 3vte_A 401 ESAIPFPHRAGIMYELWYTASWEKQ--EDNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASPNNYTQARI 478 (518)
T ss_dssp TTSSSCCCCTTCCEEEEEEEEECCT--TTHHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCCTTSCCCHHHHHH
T ss_pred CCCCcccccCcceEEEEEEEecCCc--chhHHHHHHHHHHHHHhccccCCCCccccccCCCccccccccccccchhhhhh
Confidence 9999999998558999999999765 34577889999999999998765668999999999876 32234456666778
Q ss_pred hHHhhhhhcHHHHHHHHhhcCCCCCCccCCCCCCCcccc
Q 046361 495 WGVKYFKENFNRLVRVKINVDPGNLFRHEQSIPPVPMES 533 (539)
Q Consensus 495 ~~~~yyg~n~~RL~~IK~kyDP~~vF~~~qsi~~~~~~~ 533 (539)
|++.|||+||+||++||+||||+|+|+++|||+|.+.+.
T Consensus 479 w~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p~~~~~ 517 (518)
T 3vte_A 479 WGEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPLPPHH 517 (518)
T ss_dssp HHHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCCCCTTC
T ss_pred HHHHHhHhHHHHHHHHHhhcCchhcccCCCCCCCCCCCC
Confidence 999999999999999999999999999999999987653
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=1.6e-85 Score=705.96 Aligned_cols=486 Identities=43% Similarity=0.767 Sum_probs=419.0
Q ss_pred cHHHHhhhcCCCCCCCce-eecCCCcChHHHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCeEEEEeC
Q 046361 30 NFIKCLTANSEVYIPFSN-FYTPNNPSFLSVLESSAQNLRYLVPSMPKPEFIFTPLTESHLQAAVICSRHLRIHLRARSG 108 (539)
Q Consensus 30 ~~~~~l~~~~~~~~~~~~-v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~gg 108 (539)
+|.+||...+..+ ++ |++|+|++|+.++.++.+|.||+.+..+.|.+|++|+|++||+++|++|+++++||++|||
T Consensus 1 ~~~~cl~~~~~~~---~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGg 77 (495)
T 3fw9_A 1 DLLSCLTFNGVRN---HTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSG 77 (495)
T ss_dssp CHHHHHHHTTCCC---EEECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESS
T ss_pred ChhHHHhhcCCCC---CCeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 4889999886532 55 9999999999998788999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCCCeEEEEcCCCCcEEEeCCCCEEEEeCCCCHHHHHHHHHhcCCceEeecCCCCcceeccccCCCcc
Q 046361 109 GHDYEGVSYVSQIETPFFLLDLAKLRSIEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGY 188 (539)
Q Consensus 109 Gh~~~g~s~~~~~~~~~ivIdl~~l~~v~vd~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~~gg~ 188 (539)
|||+.|.+...+ .++++|||++||+|++|+++++|+||||+++.+|+++|.++|+++.+++|.|+++||||++++||+
T Consensus 78 Gh~~~g~~~~~~--~ggvvIdl~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~ 155 (495)
T 3fw9_A 78 GHSYEGLSYTSD--TPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGF 155 (495)
T ss_dssp CCCTTCTTSCCS--SCEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCC
T ss_pred CcCCCCccccCC--CCeEEEECCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeEeeeccCCCC
Confidence 999998876542 258999999999999999999999999999999999999997678899999999999999999999
Q ss_pred CCCcccccccccceeEEEEEccCCceecccCCCcchhhhhhcccCCCceEEEEEEEEEEeeCCeEEEEEEEecch-hhHH
Q 046361 189 GTMMRKYGLAADNVVDARIVDARGRILDREAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLE-QGAT 267 (539)
Q Consensus 189 g~~s~~~G~~~d~v~~~~vV~~~G~i~~~~~~~~dLf~a~rG~~~g~~Givt~~~~k~~p~~~~~~~~~~~~~~~-~~~~ 267 (539)
|+.+++||+++|+|++++||++||++++++.+++||||++|||++|+|||||+++||++|.|+....|.+.++.. +.+.
T Consensus 156 G~~~~~~G~~~D~v~~~~vV~adG~i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~ 235 (495)
T 3fw9_A 156 GMMSRKYGLAADNVVDAILIDANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEAT 235 (495)
T ss_dssp CTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHH
T ss_pred cccccCCCchhheEEEEEEEcCCCCEEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHH
Confidence 999999999999999999999999999855578999999999666899999999999999999888888877653 5678
Q ss_pred HHHHHHHHHhhcCCccceEEEEEEeccCCCCCCceeEEEEEEEEeCCHHHHHHHhhccCccCCCCcccccccchHHHHHH
Q 046361 268 EILYKWQQVADNLDEHLFIRVIIKLANTGPKGKRTVTTSYNALFLGDAERLLQVMHKKFPELGLTRNDCIEKSWIKSVLY 347 (539)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (539)
+++..|++++..+|+++++.+.... . .....+.+.++|+|+.+++.+.+.+.|+++++...++.+++|.+.+.+
T Consensus 236 ~~l~~~~~~~~~~~~~l~~~~~~~~---~---~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~~~ 309 (495)
T 3fw9_A 236 SLLHKWQFVAEELEEDFTLSVLGGA---D---EKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAY 309 (495)
T ss_dssp HHHHHHHHHHHHSCTTEEEEEEEEE---E---TTEEEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHH
T ss_pred HHHHHHHHHHhcCChhHeEEEEEcC---C---CCceEEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHHHH
Confidence 8999999999999999998776432 1 123457788999999999988888777878766677889999998888
Q ss_pred HhcCCCCCCchhhhccccc-cccccccccccccCCCCHHHHHHHHHHHHcCCCceEEEeecCCCCCCCCCCCCCCcccCC
Q 046361 348 IAGYPNYTEPEILLEERSL-FKSYFKAKSDFVKEPIAETVLEGLWEMLLEGHDPEMIWNPYGGMMSKISEYEIPFPHRKG 426 (539)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~l~~~~i~~~~~~~~~~~~~~i~~~~~GG~v~~v~~~~tAfp~R~~ 426 (539)
++.++. ++.+.++... .+.+||.||+|+.++++++.++.+++.+.+.+.+.++++++||++++++.++||||||++
T Consensus 310 ~~~~~~---~~~l~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~~~~~GGa~~~v~~~~TAf~hR~~ 386 (495)
T 3fw9_A 310 LAGLET---VSQLNNRFLKFDERAFKTKVDLTKEPLPSKAFYGLLERLSKEPNGFIALNGFGGQMSKISSDFTPFPHRSG 386 (495)
T ss_dssp HTTCSC---GGGGGCTTSCSCCCEEEEEEEECSSCCCHHHHHHHHHHHHHCTTEEEEEEECCGGGGTSCTTTSSCCCCTT
T ss_pred Hhcccc---hhhhcCCCCCccCcceeEeehhhcCCCCHHHHHHHHHHHhhCCCcEEEecccCCccccCCCCCCCccccCc
Confidence 765432 2333343222 346788999999989999999999999987777789999999999999999999999985
Q ss_pred CeEEEEEEcccCCCCChhhHHHHHHHHHHHHhhcCcccCCCCcccccccCccccCCCC-----CCchhhhhhhhHHhhhh
Q 046361 427 NLFKIQYLTGWKDGDNRTATKHIEGIRRIYDYMAPYVSMFPRAAYVNYRDLDLGMNKK-----CNTSYIEAATWGVKYFK 501 (539)
Q Consensus 427 ~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Y~Ny~d~~~~~~~~-----~~~~~~~~~~~~~~yyg 501 (539)
.+|.+++.+.|.++.++.++++.+|++++++.+.|+.+..++++|+||+|.+++.++. ++.+|..++.|++.|||
T Consensus 387 ~~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~Yyg 466 (495)
T 3fw9_A 387 TRLMVEYIVAWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYFL 466 (495)
T ss_dssp CCEEEEEEEEECGGGGGGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHHHHG
T ss_pred cceEEEEEEecCCCCcchhHHHHHHHHHHHHHHhhhccCCCcccccCccCccccccccccccccccccchhhhhHHHHhH
Confidence 6899999999975433456778899999999999997656678999999998752110 12345556689999999
Q ss_pred hcHHHHHHHHhhcCCCCCCccCCCCCCC
Q 046361 502 ENFNRLVRVKINVDPGNLFRHEQSIPPV 529 (539)
Q Consensus 502 ~n~~RL~~IK~kyDP~~vF~~~qsi~~~ 529 (539)
+||+||++||+||||+|+|+++|+|+|.
T Consensus 467 ~n~~RL~~vK~~yDP~n~F~~~qsI~p~ 494 (495)
T 3fw9_A 467 SNYERLIRAKTLIDPNNVFNHPQSIPPM 494 (495)
T ss_dssp GGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred hHHHHHHHHHHhhCcHhhCCCCCCCCCC
Confidence 9999999999999999999999999985
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=4.8e-81 Score=676.66 Aligned_cols=491 Identities=45% Similarity=0.834 Sum_probs=409.2
Q ss_pred ccccccHHHHhhhcCCCCCCCce-eecCCCcChHHHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCeE
Q 046361 25 ISILNNFIKCLTANSEVYIPFSN-FYTPNNPSFLSVLESSAQNLRYLVPSMPKPEFIFTPLTESHLQAAVICSRHLRIHL 103 (539)
Q Consensus 25 ~~~~~~~~~~l~~~~~~~~~~~~-v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v 103 (539)
++..++|.+||...+. ++ |++|+++.|..++.++.+|.||+.....+|.+||+|+|++||+++|++|+++++||
T Consensus 5 ~~~~~~f~~~L~~~~~-----~~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~ 79 (500)
T 3tsh_A 5 PAAKEDFLGCLVKEIP-----PRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRI 79 (500)
T ss_dssp ----CHHHHHHHHHSC-----GGGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEE
T ss_pred cccHHHHHHHHHhhCC-----CCEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcE
Confidence 4567899999998764 34 88999999999998999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCCccccCCCCCeEEEEcCCCCcEEEeCCCCEEEEeCCCCHHHHHHHHHhcCCceEeecCCCCcceecccc
Q 046361 104 RARSGGHDYEGVSYVSQIETPFFLLDLAKLRSIEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHI 183 (539)
Q Consensus 104 ~v~ggGh~~~g~s~~~~~~~~~ivIdl~~l~~v~vd~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~ 183 (539)
++|||||++.|.+.+....+++++|||++||+|++|+++++|+||||++|+||+++|.++|+.+.+++|.|++|||||++
T Consensus 80 ~~r~gGh~~~g~s~~~~~~~~~~~idl~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~ 159 (500)
T 3tsh_A 80 RVRSGGHDYEGLSYRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNF 159 (500)
T ss_dssp EEESSCCCTTCTTTCCSSSCCEEEEECTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHH
T ss_pred EEEcCCcCCCCCcCCCCCcCCeEEEECcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCcc
Confidence 99999999998775532234789999999999999999999999999999999999999998888999999999999999
Q ss_pred CCCccCCCcccccccccceeEEEEEccCCceecccCCCcchhhhhhcccCCCceEEEEEEEEEEeeCCeEEEEEEEecch
Q 046361 184 TGGGYGTMMRKYGLAADNVVDARIVDARGRILDREAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLE 263 (539)
Q Consensus 184 ~~gg~g~~s~~~G~~~d~v~~~~vV~~~G~i~~~~~~~~dLf~a~rG~~~g~~Givt~~~~k~~p~~~~~~~~~~~~~~~ 263 (539)
++||+|.++++||+++|+|+++|||++||++++++.+++||||++|||++|+|||||+++||++|.|+....+...+...
T Consensus 160 ~~gg~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~ 239 (500)
T 3tsh_A 160 AGGGFGMLLRKYGIAAENVIDVKLVDANGKLHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVS 239 (500)
T ss_dssp HTCCCCTTHHHHCCGGGGEEEEEEECTTSCEECHHHHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETT
T ss_pred ccccCCccccccCChhhheeeEEEECCCceEEECCCCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcH
Confidence 99999999999999999999999999999999866678999999998887899999999999999999888888777766
Q ss_pred hhHHHHHHHHHHHhhcCCccceEEEEEEeccCCCCCCceeEEEEEEEEeCCHHHHHHHhhccCccCCCCcccccccchHH
Q 046361 264 QGATEILYKWQQVADNLDEHLFIRVIIKLANTGPKGKRTVTTSYNALFLGDAERLLQVMHKKFPELGLTRNDCIEKSWIK 343 (539)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 343 (539)
+.+.+++..|+.+.+.+|+++...+.... ....+.++|+|+.+++...+...++.++.....+..++|.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----------~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 309 (500)
T 3tsh_A 240 EGAVDIINKWQVVAPQLPADLMIRIIAQG----------PKATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSWIQ 309 (500)
T ss_dssp TTHHHHHHHHHHHGGGSCTTEEEEEEESS----------SEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHH
T ss_pred HHHHHHHHHHHHhhhccChhhEEEEEecC----------CCcEEEEEEecchhhhhhhhhhcchhccCCccccchhhhhc
Confidence 66788999999999999998877665421 13556788999998888877777777776666677788888
Q ss_pred HHHHHhcCCCCCCchhhhccccccccccccccccccCCCCHHHHHHHHHHHHcCC-CceEEEeecCCCCCCCCCCCCCCc
Q 046361 344 SVLYIAGYPNYTEPEILLEERSLFKSYFKAKSDFVKEPIAETVLEGLWEMLLEGH-DPEMIWNPYGGMMSKISEYEIPFP 422 (539)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~~~~-~~~i~~~~~GG~v~~v~~~~tAfp 422 (539)
.+.+............+.++......+.+.++.+..++++++.++.+++.+...+ ...+.++++||+++++++++|+||
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gga~~~~~~~ata~~ 389 (500)
T 3tsh_A 310 SIPFVHLGHRDALEDDLLNRQNSFKPFAEYKSDYVYQPFPKTVWEQILNTWLVKPGAGIMIFDPYGATISATPESATPFP 389 (500)
T ss_dssp HHHHHHHCCSSCHHHHHHCCCCCCCCEEEEEEEEECSCCCHHHHHHHHHTGGGSTTCCEEEEEECCHHHHHSCTTSSSCC
T ss_pred cchhhhhccccccccccccccccccchhhhhhhhhcccCcHHHHHHHHHHhhcCCCceEEEEcccCccccCCCCccCcCc
Confidence 7665443222211122233332333445567777777888888888887665443 467788999999999999999999
Q ss_pred ccCCCeEEEEEEcccCCCCChhhHHHHHHHHHHHHhhcCcccCCCCcccccccCccccCCCC--CCchhhhhhhhHHhhh
Q 046361 423 HRKGNLFKIQYLTGWKDGDNRTATKHIEGIRRIYDYMAPYVSMFPRAAYVNYRDLDLGMNKK--CNTSYIEAATWGVKYF 500 (539)
Q Consensus 423 ~R~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Y~Ny~d~~~~~~~~--~~~~~~~~~~~~~~yy 500 (539)
||++.++.+++...|.++.+ +++..+|++++++.+.++.+..+.++|+||+|.+++.++. ....+...++|++.||
T Consensus 390 ~R~~~l~~i~~~~~w~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~~Y~ 467 (500)
T 3tsh_A 390 HRKGVLFNIQYVNYWFAPGA--AAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQKYF 467 (500)
T ss_dssp CCTTCCEEEEEEEEECSTTC--CHHHHHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHHHHHHHHHH
T ss_pred ccCCcEEEEEEEEecCCcch--hHHHHHHHHHHHHHHHHHhcCCCCeEEeccccccccccccccccccccccchHHHHhh
Confidence 99977889999999987753 4667899999999999987766789999999999764322 1124455678999999
Q ss_pred hhcHHHHHHHHhhcCCCCCCccCCCCCCCccc
Q 046361 501 KENFNRLVRVKINVDPGNLFRHEQSIPPVPME 532 (539)
Q Consensus 501 g~n~~RL~~IK~kyDP~~vF~~~qsi~~~~~~ 532 (539)
|+||+||++||+||||+|+|+++|+|||..-+
T Consensus 468 g~Ny~RL~~IK~kyDP~nvF~~~qsI~Pl~~~ 499 (500)
T 3tsh_A 468 KGNFERLAITKGKVDPTDYFRNEQSIPPLIKK 499 (500)
T ss_dssp GGGHHHHHHHHHHHCTTCCSCCTTSCCCCCC-
T ss_pred hHHHHHHHHHHHHhCcccccCCCCCCCCCCCC
Confidence 99999999999999999999999999997643
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=2.8e-74 Score=617.47 Aligned_cols=455 Identities=24% Similarity=0.408 Sum_probs=368.5
Q ss_pred cHHHHhhhcCCCCCCCceeecCCCcChHHHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCC
Q 046361 30 NFIKCLTANSEVYIPFSNFYTPNNPSFLSVLESSAQNLRYLVPSMPKPEFIFTPLTESHLQAAVICSRHLRIHLRARSGG 109 (539)
Q Consensus 30 ~~~~~l~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggG 109 (539)
+|.+||..... .+++|+|+.|+.++ .. |+.+....|.+|++|+|++||+++|++|+++++||++||||
T Consensus 2 ~l~~cl~~~~~------~v~~p~~~~y~~~~--~~----~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggG 69 (473)
T 3rja_A 2 AIEACLSAAGV------PIDIPGTADYERDV--EP----FNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSGG 69 (473)
T ss_dssp HHHHHHHHTTC------CBCCTTSHHHHHHT--CC----SBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSC
T ss_pred hHHHHHHhCCC------cEECCCCCchHHHH--HH----hhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcCC
Confidence 58899998743 29999999999874 23 44445569999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCeEEEEcCCCCcEE-EeCCCCEEEEeCCCCHHHHHHHHHhcCCceEeecCCCCcceeccccCCCcc
Q 046361 110 HDYEGVSYVSQIETPFFLLDLAKLRSIE-VDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGY 188 (539)
Q Consensus 110 h~~~g~s~~~~~~~~~ivIdl~~l~~v~-vd~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~~gg~ 188 (539)
||+.+.+... .+++++|||++||+|. +|+++++|+||||+++.+|+++|.++| ++.++.|.|+++||||++++||+
T Consensus 70 h~~~g~~~~~--~~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G-~~~~p~G~~~~vgvgG~~~ggg~ 146 (473)
T 3rja_A 70 HSYASFGFGG--ENGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKY-GRAISHGTCPGVGISGHFAHGGF 146 (473)
T ss_dssp CCTTCGGGTS--SSSCEEEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHH-SEECCCCSCTTCBHHHHHHTCCC
T ss_pred CCCCCCcccC--CCCeEEEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcC-CEEeccCCCCCcEeeeeccCCCC
Confidence 9998654432 2367999999999996 999999999999999999999999997 37788999999999999999999
Q ss_pred CCCcccccccccceeEEEEEccCCceec-ccCCCcchhhhhhcccCCCceEEEEEEEEEEeeCCeEEEEEEEecch--hh
Q 046361 189 GTMMRKYGLAADNVVDARIVDARGRILD-REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLE--QG 265 (539)
Q Consensus 189 g~~s~~~G~~~d~v~~~~vV~~~G~i~~-~~~~~~dLf~a~rG~~~g~~Givt~~~~k~~p~~~~~~~~~~~~~~~--~~ 265 (539)
|..+++||+++|+|+++|||++||++++ +..+++||||++||++ |+|||||+++||++|.|+....+.+.+++. +.
T Consensus 147 G~~~~~~G~~~D~v~~~~vV~a~G~v~~~~~~~~~dLf~a~rG~~-g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~ 225 (473)
T 3rja_A 147 GFSSHMHGLAVDSVVGVTVVLADGRIVEASATENADLFWGIKGAG-SNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTS 225 (473)
T ss_dssp CTTHHHHCCGGGGEEEEEEECTTSCEEEEETTBSHHHHHHHHHHG-GGTCEEEEEEEECEECCSCEEEEEEECCCCSHHH
T ss_pred CcccccccchHhheeeEEEEecCCeEEEeCCCCCcchhhcccCCC-CceEEEEEEEEEEEeCCCceEEEEEEecCccHHH
Confidence 9999999999999999999999999997 5567899999999997 899999999999999998888888777764 34
Q ss_pred HHHHHHHHHHHhh-cCCccceEEEEEEeccCCCCCCceeEEEEEEEEeCCHHHHHHHhhccCccCC-CCccccc-ccchH
Q 046361 266 ATEILYKWQQVAD-NLDEHLFIRVIIKLANTGPKGKRTVTTSYNALFLGDAERLLQVMHKKFPELG-LTRNDCI-EKSWI 342 (539)
Q Consensus 266 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~-~~~~~~~-~~~~~ 342 (539)
+.+++++|+++.. ++|+++++.+.+.. .. .+.+.++|+|+.+++.+.+.+.+...+ +...++. +++|.
T Consensus 226 ~~~~~~~~~~~~~~~~p~~l~~~~~~~~------~~---~~~~~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~~~~~ 296 (473)
T 3rja_A 226 ALKGIEAVEDYARWVAPREVNFRIGDYG------AG---NPGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLNWI 296 (473)
T ss_dssp HHHHHHHHHHHHHHTCCTTEEEEEEESS------SS---CCEEEEEEESCHHHHHHHHHHHHTTSCTTCEECCCEEECHH
T ss_pred HHHHHHHHHHHhhhCCChhHEEEEEEcC------CC---cEEEEEEecCCHHHHHHHHHHHHHhCCCCcceeeecccCHH
Confidence 6789999999988 89999988777641 11 256778999999998888776443333 2345667 89999
Q ss_pred HHHHHHhcCCCCCCchhhhccccccccccccccccccCCCCHHHHHHHHHHHHcCC------CceEEEeecCC---CCCC
Q 046361 343 KSVLYIAGYPNYTEPEILLEERSLFKSYFKAKSDFVKEPIAETVLEGLWEMLLEGH------DPEMIWNPYGG---MMSK 413 (539)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~~~~------~~~i~~~~~GG---~v~~ 413 (539)
+.+.++.... ..+.... . ....|+.|+.+. +++++++++.+++.+.+.. .+.++++++|| ++++
T Consensus 297 ~~~~~~~~~~---~~~~~~~--~-~~~~~~~ks~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai~~ 369 (473)
T 3rja_A 297 ESVLSYSNFD---HVDFITP--Q-PVENFYAKSLTL-KSIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQVTK 369 (473)
T ss_dssp HHHHHTSSSS---CCCCSSC--C-CCBEEEEEEEEE-SCCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGGGG
T ss_pred HHHHhhhcCC---CcccccC--C-CCCcceEecccc-CCCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhhcC
Confidence 9877654321 1111100 0 034566788775 4699999999999886421 13578999998 6788
Q ss_pred CCCCCCCCcccCCCeEEEEEEcccCC-CCChhhHHHHHHHHHHHHhhcCcccCCCCcccccccCccccCCCCCCchhhhh
Q 046361 414 ISEYEIPFPHRKGNLFKIQYLTGWKD-GDNRTATKHIEGIRRIYDYMAPYVSMFPRAAYVNYRDLDLGMNKKCNTSYIEA 492 (539)
Q Consensus 414 v~~~~tAfp~R~~~~~~~~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Y~Ny~d~~~~~~~~~~~~~~~~ 492 (539)
++.++||||||+ ..|.+++.+.|.+ +. .+++..+|++++++.+.+.....+.++|+||+|.+++ .
T Consensus 370 v~~~~TAf~hR~-~~~~~~~~~~w~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~-----------~ 435 (473)
T 3rja_A 370 VTNAETAYPHRD-KLWLIQFYDRYDNNQT--YPETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMD-----------R 435 (473)
T ss_dssp SCTTTSSCCCTT-CSEEEEEEEEECTTSC--CCTTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSC-----------H
T ss_pred CCCCCCccccCC-ccEEEEEEEEeCCCCc--cchHHHHHHHHHHHHHHhhCCCCCCceEecCCCcccc-----------c
Confidence 899999999999 6899999999964 32 2234557777776666443322345899999999864 2
Q ss_pred hhhHHhhhhhcHHHHHHHHhhcCCCCCCccCCCCCCCc
Q 046361 493 ATWGVKYFKENFNRLVRVKINVDPGNLFRHEQSIPPVP 530 (539)
Q Consensus 493 ~~~~~~yyg~n~~RL~~IK~kyDP~~vF~~~qsi~~~~ 530 (539)
.+|++.|||+||+||++||+||||+|+|+++|+|+|.|
T Consensus 436 ~~~~~~yyg~n~~RL~~vK~kyDP~n~F~~~qsI~p~~ 473 (473)
T 3rja_A 436 DYATKVYYGENLARLQKLKAKFDPTDRFYYPQAVRPVK 473 (473)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCC
T ss_pred hhHHHHHHHHHHHHHHHHhhccCchhhCCCCcCCCCCC
Confidence 37999999999999999999999999999999999875
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=3.8e-71 Score=595.74 Aligned_cols=449 Identities=22% Similarity=0.396 Sum_probs=348.6
Q ss_pred Cce-eecCCCcChHHHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCC
Q 046361 45 FSN-FYTPNNPSFLSVLESSAQNLRYLVPSMPKPEFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYEGVSYVSQIET 123 (539)
Q Consensus 45 ~~~-v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~s~~~~~~~ 123 (539)
+.+ +++|+|++|+.++ ..+|.||. ..|.+|++|+|++||+++|++|+++++||++||||||+.+.+... +
T Consensus 8 ~~~~~~~p~~~~y~~~~--~~~n~~~~----~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~---~ 78 (501)
T 3pop_A 8 VPPFTVGREDPRYIELS--HSDNHRFV----VEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTP---R 78 (501)
T ss_dssp -CCEEEETTSTTHHHHT--CCSCTTSC----CCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSS---C
T ss_pred CCCceECCCCcchHHHH--HHHhhccC----CCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccC---C
Confidence 456 9999999999875 35566664 599999999999999999999999999999999999999877654 2
Q ss_pred CeEEEEcCCCCcEEEeCCCCEEEEeCCCCHHHHHHHHHh-cCCceEeecCCCCcceeccccCCCccCCCcccccccccce
Q 046361 124 PFFLLDLAKLRSIEVDINNKTAWVQAGATIGELYYRISE-KSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNV 202 (539)
Q Consensus 124 ~~ivIdl~~l~~v~vd~~~~~v~v~aG~~~~~l~~~l~~-~g~~l~~~~g~~~~vgvgG~~~~gg~g~~s~~~G~~~d~v 202 (539)
++++|||++||+|++|+++++|+||||+++.+|+++|.+ +| +.++.|.|+++||||++++||+|+++++||+++|+|
T Consensus 79 ~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v 156 (501)
T 3pop_A 79 RDLVLDLHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRWN--AALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHL 156 (501)
T ss_dssp CSEEEECTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHHS--BCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGE
T ss_pred CEEEEEecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhcC--eEeCCCCCCCceEeeccccCCCcccccccccHHHhE
Confidence 579999999999999999999999999999999999974 65 677899999999999999999999999999999999
Q ss_pred eEEEEEc--cCCc--eec----ccCCCcchhhhhhcccCCCceEEEEEEEEE----------EeeC-CeEEEEEEEecch
Q 046361 203 VDARIVD--ARGR--ILD----REAMGEDLFWAIRGGGGGSFGIILAWKVKL----------VPVP-ATVTVFTVSKTLE 263 (539)
Q Consensus 203 ~~~~vV~--~~G~--i~~----~~~~~~dLf~a~rG~~~g~~Givt~~~~k~----------~p~~-~~~~~~~~~~~~~ 263 (539)
+++|||+ +||+ +++ ++.+|+|||||+||||+|+|||||+++||+ +|.+ ..+..+.+.|+..
T Consensus 157 ~~~evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~~ 236 (501)
T 3pop_A 157 HAVEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWA 236 (501)
T ss_dssp EEEEEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEGG
T ss_pred EEEEEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEchh
Confidence 9999999 8999 443 235689999999998669999999999999 6654 4566667776543
Q ss_pred ----hhHHHHHHHHHHHhh--cCCcc----ceEEEEEEeccCCCCCCceeEEEEEEEEeCCHHHHHHHhhccCcc----C
Q 046361 264 ----QGATEILYKWQQVAD--NLDEH----LFIRVIIKLANTGPKGKRTVTTSYNALFLGDAERLLQVMHKKFPE----L 329 (539)
Q Consensus 264 ----~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~----~ 329 (539)
+...+++..|++|.. ..|++ +...+.+.. ...+ .+.+...+.|+.++..+.+.+.+.. +
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~ 309 (501)
T 3pop_A 237 MIDETSFVTVMRRFFEWHERHSEPGSPESSLFATFFVNH---VSSG----VLQLMVQQDADVDPEGEILARFVASLTEGT 309 (501)
T ss_dssp GCCHHHHHHHHHHHHHHHHHSCCTTCGGGGEEEEEEEEC---GGGC----EEEEEEEEETTTCTTCHHHHHHHHHHHTTS
T ss_pred hcCHHHHHHHHHHHHHHHhhccCCCccccceEEEEEecC---CCCC----eEEEEEEEeCChHHHHHHHHHHHHhhhhcc
Confidence 224577888888765 34543 333333321 1111 2455667788776554444432221 2
Q ss_pred CC-CcccccccchHHHHHHHhcCCCCCCchhhhccccccccccccccccccCCCCHHHHHHHHHHHHcC---CCceEEEe
Q 046361 330 GL-TRNDCIEKSWIKSVLYIAGYPNYTEPEILLEERSLFKSYFKAKSDFVKEPIAETVLEGLWEMLLEG---HDPEMIWN 405 (539)
Q Consensus 330 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~~~---~~~~i~~~ 405 (539)
+. +..++.+++|.+...++. .+.+. .....+++.|+.++.++++++.++.+++.+.+. +.+.++++
T Consensus 310 g~~p~~~~~~~~~~~~~~~~~-~~~~~---------~~~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~ 379 (501)
T 3pop_A 310 GVVGIPRGGVMSWLTGTRYMS-QADCG---------DVMGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVMFN 379 (501)
T ss_dssp SCCCEEEEEEEEHHHHHHHTC-BCSCG---------GGTTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEEEE
T ss_pred CCCccceeEEeCHHHHHhhhc-CCCCC---------cccccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEE
Confidence 21 122367789988665432 11100 001235677899888789999999999998763 23678999
Q ss_pred ecCCCCCCCCCCCCCCcccCCCeEEEEEEcccCCCCChhhHHHHHHHHHHHHhhcCccc------CCCCcccccccCccc
Q 046361 406 PYGGMMSKISEYEIPFPHRKGNLFKIQYLTGWKDGDNRTATKHIEGIRRIYDYMAPYVS------MFPRAAYVNYRDLDL 479 (539)
Q Consensus 406 ~~GG~v~~v~~~~tAfp~R~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~Y~Ny~d~~~ 479 (539)
++||++++++.++||||||+ ..|++++...|.++ +.++++.+|++++++.+.+..+ ..+.++|+||+|.++
T Consensus 380 ~~GGav~~v~~~~TAf~hR~-~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~dl 456 (501)
T 3pop_A 380 SYGGEINRRGPSDAAVPQRD-SVVKSSWFSAWQDA--ELDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDADL 456 (501)
T ss_dssp ECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCG--GGHHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCGGG
T ss_pred ecCcccccCCCCCCCccCcC-ccEEEEEEEEeCCc--chHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCccc
Confidence 99999999999999999998 68999999999865 3456788999999999876532 224689999999997
Q ss_pred cCCCCCCchhhhhhhhHHhhhhhcHHHHHHHHhhcCCCCCCccCCCCCC
Q 046361 480 GMNKKCNTSYIEAATWGVKYFKENFNRLVRVKINVDPGNLFRHEQSIPP 528 (539)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~yyg~n~~RL~~IK~kyDP~~vF~~~qsi~~ 528 (539)
+.++. +.+ +..|++.|||+||+||++||+||||+|+|+++|||+|
T Consensus 457 ~~~~~-~~~---~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 457 LDPAR-NRS---GEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp GCTTT-CCS---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred ccccc-ccc---cchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 63110 011 2249999999999999999999999999999999987
No 6
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=5e-68 Score=575.71 Aligned_cols=456 Identities=24% Similarity=0.428 Sum_probs=342.2
Q ss_pred HHHHhhhcCCCCCCCceeecCCCcChHHHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCC
Q 046361 31 FIKCLTANSEVYIPFSNFYTPNNPSFLSVLESSAQNLRYLVPSMPKPEFIFTPLTESHLQAAVICSRHLRIHLRARSGGH 110 (539)
Q Consensus 31 ~~~~l~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh 110 (539)
...||.... ..|++|+|+.|+.++ ...+|.||.. .|.+||+|+|++||+++|++|+++++||++|||||
T Consensus 23 ~~~~l~~~~------~~v~~p~d~~Y~~~~-~~~~n~~~~~----~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh 91 (523)
T 2wdx_A 23 GERCLPPAG------PVKVTPDDPRYLNLK-LRGANSRFNG----EPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGH 91 (523)
T ss_dssp ---CCCCCC------CEEECTTSTTHHHHH-TCSSCTTCCC----CCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCC
T ss_pred chhhcccCC------CeEECCCCcchHHHH-hhhhhhcccC----CCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCC
Confidence 348887753 229999999999876 3567888854 89999999999999999999999999999999999
Q ss_pred CCCCCccccCCCCCeEEEEcCCCCcEEEeCCCCEEEEeCCCCHHHHHHHHHh-cCCceEeecCCCCcceeccccCCCccC
Q 046361 111 DYEGVSYVSQIETPFFLLDLAKLRSIEVDINNKTAWVQAGATIGELYYRISE-KSNIHGFAAGLCPSVGIGGHITGGGYG 189 (539)
Q Consensus 111 ~~~g~s~~~~~~~~~ivIdl~~l~~v~vd~~~~~v~v~aG~~~~~l~~~l~~-~g~~l~~~~g~~~~vgvgG~~~~gg~g 189 (539)
|+.+.+... +++++|||++||+|++|+++++|+||||++|.+|+++|.+ +| +.+++|.|++|||||+++|||+|
T Consensus 92 ~~~g~~~~~---~~gvvIdl~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g 166 (523)
T 2wdx_A 92 CFEDFVDNP---DVKVIIDMSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGWN--VTIPGGVCGGVGVGGHICGGGYG 166 (523)
T ss_dssp CSSSSSSST---TCCEEEECTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHHS--CCCCCCCCTTCBHHHHHHHTCCC
T ss_pred CCCCCccCC---CCeEEEEcccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhcC--eEEccCCCCCCeeCccccCCCCC
Confidence 999876543 2579999999999999999999999999999999999984 86 56788999999999999999999
Q ss_pred CCcccccccccceeEEEEEccC--Cceec---cc-CCCcc--hhhhhhcccCCCceEEEEEEEEE-----------EeeC
Q 046361 190 TMMRKYGLAADNVVDARIVDAR--GRILD---RE-AMGED--LFWAIRGGGGGSFGIILAWKVKL-----------VPVP 250 (539)
Q Consensus 190 ~~s~~~G~~~d~v~~~~vV~~~--G~i~~---~~-~~~~d--Lf~a~rG~~~g~~Givt~~~~k~-----------~p~~ 250 (539)
+++++||+++|+|+++|||++| |+++. +. ++++| ||||+|||++|+|||||+++||+ +|.|
T Consensus 167 ~~s~~~G~~~D~v~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~ 246 (523)
T 2wdx_A 167 PLSRQFGSVVDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKP 246 (523)
T ss_dssp TTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCC
T ss_pred cccccccChhheEEEEEEEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCC
Confidence 9999999999999999999955 99753 22 24566 99999987668999999999999 9987
Q ss_pred C-eEEEEEEEecch----hhHHHHHHHHHHHhhc--CCcc----ceEEEEEEeccCCCCCCceeEEEEEEEEeCCHHHHH
Q 046361 251 A-TVTVFTVSKTLE----QGATEILYKWQQVADN--LDEH----LFIRVIIKLANTGPKGKRTVTTSYNALFLGDAERLL 319 (539)
Q Consensus 251 ~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~ 319 (539)
+ .+..+.+.|+.. +...++++.|++|... .|++ +...+.+.. ...+...+.+.+...|.|+.++..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~g~~~~~~ 323 (523)
T 2wdx_A 247 PATLLTSTVTFDWAGMTEAAFSRLLRNHGEWYERNSGPDSPYTGLWSQLMIGN---EVPGMGESGFMMPIQVDATRPDAR 323 (523)
T ss_dssp CSEEEEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEEC---CCTTCTTCSEEEEEEEETTSTTHH
T ss_pred cccEEEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCccccceEEEEEecc---CCCCCcceeEEEEEEEeCCHHHHH
Confidence 6 456667777642 2345778888887654 4554 333333321 111211123556677888766555
Q ss_pred HHhhccCc---c-CC-CCcccccccchHHHHHHHhcCCCCCCchhhhccccccccccccccccccCCCCHHHHHHHHHHH
Q 046361 320 QVMHKKFP---E-LG-LTRNDCIEKSWIKSVLYIAGYPNYTEPEILLEERSLFKSYFKAKSDFVKEPIAETVLEGLWEML 394 (539)
Q Consensus 320 ~~l~~~~~---~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~ 394 (539)
+.+.+.+. + ++ +....+..++|.+.... . .. ...+++.++.++.+.++++.+..+++.+
T Consensus 324 ~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~----------~~---~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 387 (523)
T 2wdx_A 324 RLLDAHIEAVIDGVPPAEVPEPIEQRWLASTPG---R----------GG---RGPASKTKAGYLRKRLTDRQIQAVYENM 387 (523)
T ss_dssp HHHHHHHHHHHTTCTTCBCCCCEEEETTSSCCC---C----------CS---SCCEEEEEEEEESSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCccccceeccHHHHHHh---h----------cC---CCCceeeecccccCCCCHHHHHHHHHHH
Confidence 54443221 1 22 22233344555441100 0 00 0113455677766678889999999988
Q ss_pred HcC---CCceEEEeecCCCCCCCCCCCCCCcccCCCeEEEEEEcccCCCCChhhHHHHHHHHHHHHhhcCccc------C
Q 046361 395 LEG---HDPEMIWNPYGGMMSKISEYEIPFPHRKGNLFKIQYLTGWKDGDNRTATKHIEGIRRIYDYMAPYVS------M 465 (539)
Q Consensus 395 ~~~---~~~~i~~~~~GG~v~~v~~~~tAfp~R~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 465 (539)
... +.+.+.++.+||++++++.++|+|+||+ ..|++++...|.++ +.++.+.+|++++++.+..... .
T Consensus 388 ~~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~~~~~~~~~l~~~~~g~p~~~~ 464 (523)
T 2wdx_A 388 THMDGIDYGAVWLIGYGGKVNTVDPAATALPQRD-AILKVNYITGWANP--GNEAKHLTWVRKLYADVYAETGGVPVPND 464 (523)
T ss_dssp TCCTTCSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESSG--GGHHHHHHHHHHHHHHHTGGGTTSCCSCS
T ss_pred HhcCCCCceEEEEEecCCccccCCCccccccccC-ceEEEEEEEEcCCC--ccHHHHHHHHHHHHHHHHhhhcCCCccCC
Confidence 653 2256788999999999999999999998 68999999999865 3456788999999988872211 1
Q ss_pred CCCcccccccCccccCCCCCCchhhhhhhhHHhhhhhcHHHHHHHHhhcCCCCCCccCCCCCC
Q 046361 466 FPRAAYVNYRDLDLGMNKKCNTSYIEAATWGVKYFKENFNRLVRVKINVDPGNLFRHEQSIPP 528 (539)
Q Consensus 466 ~~~g~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~yyg~n~~RL~~IK~kyDP~~vF~~~qsi~~ 528 (539)
...|+|+||+|.+++..+ ++.++ ..|++.|||+||+||++||+||||+|||+++|+|+|
T Consensus 465 ~~~g~Y~Ny~d~~~~~~~-~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~~vF~~~qsI~p 523 (523)
T 2wdx_A 465 VSDGAYINYPDSDLADPG-LNTSG---VPWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP 523 (523)
T ss_dssp SBCCCCTTSCCGGGGCTT-TCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred CCCcceecCCcccccccc-cccch---hHHHHHHHHHHHHHHHHHHHHhCcHhhcCCCCCCCC
Confidence 135799999999875211 11111 139999999999999999999999999999999986
No 7
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=1.2e-66 Score=565.15 Aligned_cols=460 Identities=23% Similarity=0.388 Sum_probs=339.0
Q ss_pred ccccHHHHhhhcCCCCCCCceeecCCCcChHHHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCeEEEE
Q 046361 27 ILNNFIKCLTANSEVYIPFSNFYTPNNPSFLSVLESSAQNLRYLVPSMPKPEFIFTPLTESHLQAAVICSRHLRIHLRAR 106 (539)
Q Consensus 27 ~~~~~~~~l~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ 106 (539)
--.+...|+..... .|++|+|++|+.++ +..+|.||.. .|.+||+|+|++||+++|++|+++++||++|
T Consensus 17 ~~~~~~~~~~~~~~------~v~~p~d~~Y~~~~-~~~~n~~~~~----~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vr 85 (521)
T 2ipi_A 17 WEFDGGACGARTAL------VKVDRVDRRYQDLV-TRGFNGRFRG----RPDVVYVVHTADQVVDAVNQAMAAGQRIAVR 85 (521)
T ss_dssp ------------CC------CEEESSSTTHHHHH-TCCSCTTCCC----CCSEEEECSSHHHHHHHHHHHHHHTCCEEEE
T ss_pred hhccccccccCCCC------eEECCCCcchHHHH-hccccccccC----CCCEEEEcCCHHHHHHHHHHHHHcCCeEEEE
Confidence 44566678776532 29999999999876 3466778754 8999999999999999999999999999999
Q ss_pred eCCCCCCCCccccCCCCCeEEEEcCCCCcEEEeCCCCEEEEeCCCCHHHHHHHHH-hcCCceEeecCCCCcceeccccCC
Q 046361 107 SGGHDYEGVSYVSQIETPFFLLDLAKLRSIEVDINNKTAWVQAGATIGELYYRIS-EKSNIHGFAAGLCPSVGIGGHITG 185 (539)
Q Consensus 107 ggGh~~~g~s~~~~~~~~~ivIdl~~l~~v~vd~~~~~v~v~aG~~~~~l~~~l~-~~g~~l~~~~g~~~~vgvgG~~~~ 185 (539)
|||||+.+.+... +++++|||++||+|++|+++++|+||||++|.+|+++|. ++| +.+++|.|+++||||+++|
T Consensus 86 ggGh~~~g~~~~~---~~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~g 160 (521)
T 2ipi_A 86 SGGHCFEGFVDDP---AVRAVIDMSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDWG--VTIPAGVCPQVGVGGHVLG 160 (521)
T ss_dssp SSCCCTTCGGGCT---TCCEEEECTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHHS--BCCCCCSCTTCBHHHHTTT
T ss_pred CCCcCCCCCcccC---CCeEEEecccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhcC--ceeCCCCCCCcccCCcccC
Confidence 9999998866433 257999999999999999999999999999999999997 676 6678899999999999999
Q ss_pred CccCCCcccccccccceeEEEEEccC--Cceec---cc-CCCcc--hhhhhhcccCCCceEEEEEEEEE-----------
Q 046361 186 GGYGTMMRKYGLAADNVVDARIVDAR--GRILD---RE-AMGED--LFWAIRGGGGGSFGIILAWKVKL----------- 246 (539)
Q Consensus 186 gg~g~~s~~~G~~~d~v~~~~vV~~~--G~i~~---~~-~~~~d--Lf~a~rG~~~g~~Givt~~~~k~----------- 246 (539)
||+|+++++||+++|+|+++|||++| |+++. +. ++++| ||||+|||++|+|||||+++||+
T Consensus 161 Gg~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~ 240 (521)
T 2ipi_A 161 GGYGPLSRRDGVVADHLYAVEVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQL 240 (521)
T ss_dssp TCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGS
T ss_pred CCCCccccccccHhhcEEEEEEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccc
Confidence 99999999999999999999999977 98742 22 24554 99999997668999999999999
Q ss_pred EeeCC-eEEEEEEEecch----hhHHHHHHHHHHHhhc--CCcc----ceEEEEEEeccCCCCCCceeEEEEEEEEeCCH
Q 046361 247 VPVPA-TVTVFTVSKTLE----QGATEILYKWQQVADN--LDEH----LFIRVIIKLANTGPKGKRTVTTSYNALFLGDA 315 (539)
Q Consensus 247 ~p~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~ 315 (539)
+|.|+ .+..+.+.|+.. +...++++.|+++... .|++ +...+.+.. ...+ .+.+...|.|+.
T Consensus 241 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~l~~~~~~~~---~~~~----~~~~~~~~~g~~ 313 (521)
T 2ipi_A 241 LPKAPTSTLRHIVTWDWSALTEEAFTRIIDNHGAWHQSNSAAGTPYASMHSVFYLNS---RAAG----QILLDIQIDGGL 313 (521)
T ss_dssp SCBCCSCEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHSCSSSSGGGGCEEEEEEEC---TTSC----EEEEEEEEETTS
T ss_pred cCCCCceEEEEEEEecccccCHHHHHHHHHHHHHHHHhccCCCccccceEEEEEecc---CCCC----ceEEEEEeccCH
Confidence 99875 355556666432 2235778888887654 4544 333333321 1111 234456688876
Q ss_pred HHHHHHhhccC---cc-CC-CCcccccccchHHHHHHHhcCCCCCCchhhhccccccccccccccccccCCCCHHHHHHH
Q 046361 316 ERLLQVMHKKF---PE-LG-LTRNDCIEKSWIKSVLYIAGYPNYTEPEILLEERSLFKSYFKAKSDFVKEPIAETVLEGL 390 (539)
Q Consensus 316 ~~~~~~l~~~~---~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~~ 390 (539)
++..+.+.+.+ .. ++ +....+..++|.+......... . ...+++.++.++.++++++.++.+
T Consensus 314 ~~~~~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~------------~-~~~~~~~~s~~~~~~~~~~~i~~~ 380 (521)
T 2ipi_A 314 DGAEALLNDFVAAVNEGTGVEPAVQRSTEPWLRATLANKFDT------------G-GFDRTKSKGAYLRKPWTAAQAATL 380 (521)
T ss_dssp TTHHHHHHHHHHHHTTTCSSCCEEEEEEECHHHHHTCCCCCC------------T-TCCEEEEEEEEESSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCCCccceeeecCHHHHHHhhcCCC------------C-CCccceeeccccccCCCHHHHHHH
Confidence 55544443321 11 22 2223445678877432211100 0 002344566676667888999999
Q ss_pred HHHHHcCC--CceEEEeecCCCCCCCCCCCCCCcccCCCeEEEEEEcccCCCCChhhHHHHHHHHHHHHhhcCcccC---
Q 046361 391 WEMLLEGH--DPEMIWNPYGGMMSKISEYEIPFPHRKGNLFKIQYLTGWKDGDNRTATKHIEGIRRIYDYMAPYVSM--- 465 (539)
Q Consensus 391 ~~~~~~~~--~~~i~~~~~GG~v~~v~~~~tAfp~R~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 465 (539)
++.+.+.+ .+.+.++++||++++++.++|||+||+ +.+.+++...|.++ +.++...+|++++++.+......
T Consensus 381 ~~~~~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~~~~~~~~~~~~~~~g~p~ 457 (521)
T 2ipi_A 381 YRHLSADSQVWGEVSLYSYGGKVNSVPETATATAQRD-SIIKVWMSATWMDP--AHDDANLAWIREIYREIFATTGGVPV 457 (521)
T ss_dssp HHHHHSCCSSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCG--GGHHHHHHHHHHHHHHHTTTTTSSCC
T ss_pred HHHHHhCCCCceEEEEEecCCcccCCCCccccccccc-hhhhcceeEecCCC--CchHHHHHHHHHHHHHHHhhhcCCCc
Confidence 99987653 367888999999999999999999998 68999999999865 34567789999999988732211
Q ss_pred ---CCCcccccccCccccCCCCCCchhhhhhhhHHhhhhhcHHHHHHHHhhcCCCCCCccCCCCCCC
Q 046361 466 ---FPRAAYVNYRDLDLGMNKKCNTSYIEAATWGVKYFKENFNRLVRVKINVDPGNLFRHEQSIPPV 529 (539)
Q Consensus 466 ---~~~g~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~yyg~n~~RL~~IK~kyDP~~vF~~~qsi~~~ 529 (539)
...|+|+||+|.+++..+ .+.+ ...|++.|||+||+||++||+||||+|+|+++|+|+|+
T Consensus 458 ~~~~~~g~Y~Ny~d~~~~~~~-~~~~---~~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p~ 520 (521)
T 2ipi_A 458 PDDRTEGTFINYPDVDLVDER-WNTS---GVPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRPP 520 (521)
T ss_dssp SSSSBCCCCTTSCCGGGGCTT-TSCC---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred ccCCCCceEeCCCCccccccc-cccc---hhhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCCC
Confidence 135799999999875210 0000 01499999999999999999999999999999999985
No 8
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=2.4e-66 Score=562.89 Aligned_cols=447 Identities=25% Similarity=0.425 Sum_probs=339.1
Q ss_pred eecCCCcChHHHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCeEE
Q 046361 48 FYTPNNPSFLSVLESSAQNLRYLVPSMPKPEFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYEGVSYVSQIETPFFL 127 (539)
Q Consensus 48 v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~s~~~~~~~~~iv 127 (539)
|++|+|++|+.++ ..+|.||. ..|.+|++|+|++||+++|++|+++++||++||||||+.+.+... .++++
T Consensus 36 v~~p~~~~Y~~~~--~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~---~~gvv 106 (530)
T 2y3s_A 36 SVAPGDIRYEDLR--RGENLRFV----GDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANS---DVRVV 106 (530)
T ss_dssp EECTTSTTHHHHT--CCSCTTCC----CCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTCT---TCCEE
T ss_pred EECCCCccHHHHH--hHhhhhcc----CCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccC---CCeEE
Confidence 8999999999985 35577774 489999999999999999999999999999999999998866543 25799
Q ss_pred EEcCCCCcEEEeCCCCEEEEeCCCCHHHHHHHHHh-cCCceEeecCCCCcceeccccCCCccCCCcccccccccceeEEE
Q 046361 128 LDLAKLRSIEVDINNKTAWVQAGATIGELYYRISE-KSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDAR 206 (539)
Q Consensus 128 Idl~~l~~v~vd~~~~~v~v~aG~~~~~l~~~l~~-~g~~l~~~~g~~~~vgvgG~~~~gg~g~~s~~~G~~~d~v~~~~ 206 (539)
|||++||+|++|+++++|+||||++|.+|+++|.+ +| +.+++|.|++|||||+++|||+|+++++||+++|+|+++|
T Consensus 107 Idl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~e 184 (530)
T 2y3s_A 107 MDMSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVWG--VTLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAVE 184 (530)
T ss_dssp EECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHHS--CCCCCCSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEEEE
T ss_pred EEcccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhcC--eEEeCCCCCCCCcCCCcCCCCCCcccccccchhhheeeEE
Confidence 99999999999999999999999999999999985 76 5778899999999999999999999999999999999999
Q ss_pred EEc--cCCceec---ccC-CCcc--hhhhhhcccCCCceEEEEEEEEE------------EeeCC-eEEEEEEEecch--
Q 046361 207 IVD--ARGRILD---REA-MGED--LFWAIRGGGGGSFGIILAWKVKL------------VPVPA-TVTVFTVSKTLE-- 263 (539)
Q Consensus 207 vV~--~~G~i~~---~~~-~~~d--Lf~a~rG~~~g~~Givt~~~~k~------------~p~~~-~~~~~~~~~~~~-- 263 (539)
||+ ++|+++. +.. +++| ||||+|||++|+|||||+++||+ +|.|+ .+..+.+.|+..
T Consensus 185 vV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 264 (530)
T 2y3s_A 185 VVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPWEGL 264 (530)
T ss_dssp EEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEESTTC
T ss_pred EEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEeccccc
Confidence 999 4599742 322 4555 99999998668999999999999 88875 455566666532
Q ss_pred --hhHHHHHHHHHHHhhc--CCcc----ceEEEEEEeccCCCCCCceeEEEEEEEEeCCHHHHHHHhhcc---Ccc-CC-
Q 046361 264 --QGATEILYKWQQVADN--LDEH----LFIRVIIKLANTGPKGKRTVTTSYNALFLGDAERLLQVMHKK---FPE-LG- 330 (539)
Q Consensus 264 --~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~---~~~-~~- 330 (539)
+...++++.|+++... .|++ +...+.+.. . ... .+.+...|.|+.++..+.+.+. +.. ++
T Consensus 265 ~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~---~--~~~--~~~~~~~~~g~~~~~~~~l~p~~~~l~~~~g~ 337 (530)
T 2y3s_A 265 DEAAFARLVRNHGRWFEQNSGPDSPWCDLYSVLALTR---S--QSG--ALAMTTQLDATGPDAEKRLETYLAAVSEGVGV 337 (530)
T ss_dssp CHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEEC---G--GGS--EEEEEEEEECCSTTHHHHHHHHHHHHHTTCSS
T ss_pred CHHHHHHHHHHHHHHhhhcCCCCcccceeEEEEEecc---C--CCC--cEEEEEEEeCCHHHHHHHHHHHHHHHHhhcCC
Confidence 2345678888887654 4544 333333221 1 111 2444566888766554444432 111 23
Q ss_pred CCcccccccchHHHHHHHhcCCCCCCchhhhccccccccccccccccccCCCCHHHHHHHHHHHHcCC----CceEEEee
Q 046361 331 LTRNDCIEKSWIKSVLYIAGYPNYTEPEILLEERSLFKSYFKAKSDFVKEPIAETVLEGLWEMLLEGH----DPEMIWNP 406 (539)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~~~~----~~~i~~~~ 406 (539)
+....+..++|.+..........+ . .. .+++.++.++.++++++.++.+++.+.+.+ .+.+.+++
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~--------~--~~-~r~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 406 (530)
T 2y3s_A 338 QPHSDTRRLPWLHSTRWPGIAGDG--------D--MT-GRAKIKAAYARRSFDDRQIGTLYTRLTSTDYDNPAGVVALIA 406 (530)
T ss_dssp CCEEEEEEEEHHHHTTCHHHHCCC--------C--CC-SEEEEEEEEESSCCCHHHHHHHHHHHHCSSSCCTTCEEEEEE
T ss_pred CccceeeeccHHHHHHhhcCCCCC--------c--cc-ccceeeccccccCCCHHHHHHHHHHHHhcCCCCCceEEEEEe
Confidence 223345567787643222110000 0 01 235557777766788899999999987632 36788999
Q ss_pred cCCCCCCCCCCCCCCcccCCCeEEEEEEcccCCCCChhhHHHHHHHHHHHHhhcCcccC------CCCcccccccCcccc
Q 046361 407 YGGMMSKISEYEIPFPHRKGNLFKIQYLTGWKDGDNRTATKHIEGIRRIYDYMAPYVSM------FPRAAYVNYRDLDLG 480 (539)
Q Consensus 407 ~GG~v~~v~~~~tAfp~R~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~Y~Ny~d~~~~ 480 (539)
+||++++++.++|||+||+ +.|++++...|.++. .++...+|++++++.+...... ...|+|+||+|.+++
T Consensus 407 ~GGav~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~--~~~~~~~w~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~~ 483 (530)
T 2y3s_A 407 YGGKVNAVPADRTAVAQRD-SILKIVYVTTWEDPA--QDPVHVRWIRELYRDVYADTGGVPVPGGAADGAYVNYPDVDLA 483 (530)
T ss_dssp CCGGGGGSCTTSSSCCCCS-CSEEEEEEEEECCTT--CHHHHHHHHHHHHHHHTGGGTTSCCTTTTBCCCCTTSCCGGGG
T ss_pred cCCccccCCCCcCcccccc-cceeEEEEEecCCCc--chHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCcCcccc
Confidence 9999999999999999998 689999999998764 3467789999999988732211 135799999999876
Q ss_pred CCCCCCchhhhhhhhHHhhhhhcHHHHHHHHhhcCCCCCCccCCCCCCCc
Q 046361 481 MNKKCNTSYIEAATWGVKYFKENFNRLVRVKINVDPGNLFRHEQSIPPVP 530 (539)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~yyg~n~~RL~~IK~kyDP~~vF~~~qsi~~~~ 530 (539)
.++ ++.++ ..|++.|||+||+||++||+||||.|+|+++|+|+|+|
T Consensus 484 ~~~-~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I~p~~ 529 (530)
T 2y3s_A 484 DEE-WNTSG---VPWSELYYKDAYPRLQAVKARWDPRNVFRHALSVRVPP 529 (530)
T ss_dssp CTT-TCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCCC
T ss_pred ccc-cccch---hHHHHHHHHHHHHHHHHHHHHhCchhhcCCCCCCCCCC
Confidence 211 11111 14999999999999999999999999999999999874
No 9
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=3.3e-66 Score=559.69 Aligned_cols=457 Identities=24% Similarity=0.425 Sum_probs=351.1
Q ss_pred ccccHHHHhhhcCCCCCCCceeecCCCcChHHHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCeEEEE
Q 046361 27 ILNNFIKCLTANSEVYIPFSNFYTPNNPSFLSVLESSAQNLRYLVPSMPKPEFIFTPLTESHLQAAVICSRHLRIHLRAR 106 (539)
Q Consensus 27 ~~~~~~~~l~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ 106 (539)
.-+.|..||..... .++.|+++.|.... .+|+.+....|.+|++|+|++||+++|++|+++++||++|
T Consensus 5 ~~~~l~~~l~~~~~------~~~~~~~~~y~~~~------~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ 72 (503)
T 1zr6_A 5 EFNSINACLAAADV------EFHEEDSEGWDMDG------TAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISAK 72 (503)
T ss_dssp TTCHHHHHHHHTTC------EECCTTSHHHHHHT------SCSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHhhCcCCc------eecCCCccchHHHh------hhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEE
Confidence 34578889886531 27899999998752 2455545569999999999999999999999999999999
Q ss_pred eCCCCCCCCccccCCCCCeEEEEcCCCCcEEEeCCCCEEEEeCCCCHHHHHHHHHhcCCceEeecCCCCcceeccccCCC
Q 046361 107 SGGHDYEGVSYVSQIETPFFLLDLAKLRSIEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGG 186 (539)
Q Consensus 107 ggGh~~~g~s~~~~~~~~~ivIdl~~l~~v~vd~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~~g 186 (539)
|||||+.+.+.+. .+++++|||++||+|++| ++++|+||||+++.+|+++|.+++ ++.++.|.|+++||||+++||
T Consensus 73 ggGh~~~~~~~~~--~~~gvvIdl~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~-gl~~~~G~~~~vgvgG~~~gG 148 (503)
T 1zr6_A 73 GGGHSYGSYGFGG--EDGHLMLELDRMYRVSVD-DNNVATIQGGARLGYTALELLDQG-NRALSHGTCPAVGVGGHVLGG 148 (503)
T ss_dssp SSCCCTTCTTTTS--SSSCEEEECTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTT-SEECCCCSCTTSBHHHHHHHC
T ss_pred CCCcCCCCCcccC--CCCcEEEECccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcC-CEEeCCCCCCcCchhhhhcCC
Confidence 9999998765531 135899999999999999 888999999999999999997776 578889999999999999999
Q ss_pred ccCCCcccccccccceeEEEEEccCCceec-ccCCCcchhhhhhcccCCCceEEEEEEEEEEeeCCeEEEEEEEecc-hh
Q 046361 187 GYGTMMRKYGLAADNVVDARIVDARGRILD-REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTL-EQ 264 (539)
Q Consensus 187 g~g~~s~~~G~~~d~v~~~~vV~~~G~i~~-~~~~~~dLf~a~rG~~~g~~Givt~~~~k~~p~~~~~~~~~~~~~~-~~ 264 (539)
|+|+++++||+++|+|+++|||++||++++ +..+|+||||++|||+ |+|||||+++||++|.|+....+.+.+.. .+
T Consensus 149 g~g~~s~~~G~~~D~v~~~~vV~a~G~i~~~~~~~~~dL~~a~rG~~-g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~ 227 (503)
T 1zr6_A 149 GYGFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGGG-GGFAIVSEFEFNTFEAPEIITTYQVTTTWNRK 227 (503)
T ss_dssp CCSTTHHHHCCGGGGEEEEEEECTTSCEEEEBTTBSHHHHHHHTTCC-SSSCEEEEEEECCEECCSCEEEEEEEECCCHH
T ss_pred CCCcccccccChhheEEEEEEEecCCCEEEeCCCCCccHHHHHhccC-CCcEEEEEEEEEEEecCceeEEEEEEEeCCHH
Confidence 999999999999999999999999999997 5567899999999998 69999999999999999877677766654 23
Q ss_pred hHHHHHHHHHHHhhc-CCccceEEEEEEeccCCCCCCceeEEEEEEEEeCCHHHHHHHhhccCccCCCC--cccccccch
Q 046361 265 GATEILYKWQQVADN-LDEHLFIRVIIKLANTGPKGKRTVTTSYNALFLGDAERLLQVMHKKFPELGLT--RNDCIEKSW 341 (539)
Q Consensus 265 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~~~--~~~~~~~~~ 341 (539)
.+.++++.|+++... +|++++..+.+.. ..+.+.++|+|+.++..+.+.+.+..++.. ...+...+|
T Consensus 228 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~----------~~~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~~~~ 297 (503)
T 1zr6_A 228 QHVAGLKALQDWAQNTMPRELSMRLEINA----------NALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETDW 297 (503)
T ss_dssp HHHHHHHHHHHHHHHTCCTTBCCEEEEET----------TEEEEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEEEEECH
T ss_pred HHHHHHHHHHHHHhhcCChhHEEEEEEeC----------CeEEEEEEEECCHHHHHHHHHHHHHhcCcCCCcCceeeCCH
Confidence 456788899998876 8888877666542 135567889999988777666543333331 233456677
Q ss_pred HHHHHHHhcCCCCCCchhhhccccccccccccccccccCCCCHHHHHHHHHHHH-cCCC-----ceEEEeecCC---CCC
Q 046361 342 IKSVLYIAGYPNYTEPEILLEERSLFKSYFKAKSDFVKEPIAETVLEGLWEMLL-EGHD-----PEMIWNPYGG---MMS 412 (539)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~-~~~~-----~~i~~~~~GG---~v~ 412 (539)
.+.+..+.. ...... ......+..++.++.+.++ ++++.++.+++.+. .... +.+.++++|| +++
T Consensus 298 ~~~~~~~~~---~~~~~~--~~p~g~~~~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~av~ 371 (503)
T 1zr6_A 298 YGQINTYLY---GADLNI--TYNYDVHEYFYANSLTAPR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSALA 371 (503)
T ss_dssp HHHHTTSCT---TCCSSC--SSCCCCCBCEEEEEEEESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCSGG
T ss_pred HHHHHHHcC---CCcccc--cCCCCccccceecccchhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhhhc
Confidence 764322211 000000 0001112345667777665 88899999999887 5321 3578899999 888
Q ss_pred CCCCCCCCCcccCCCeEEEEEEccc-----CCCCChhhHHHHHHHHHHHHhhcCcccCCCCcccccccCccccCCCCCCc
Q 046361 413 KISEYEIPFPHRKGNLFKIQYLTGW-----KDGDNRTATKHIEGIRRIYDYMAPYVSMFPRAAYVNYRDLDLGMNKKCNT 487 (539)
Q Consensus 413 ~v~~~~tAfp~R~~~~~~~~~~~~W-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Y~Ny~d~~~~~~~~~~~ 487 (539)
+++.++++|+||+ +.|++++...| .++. .++...+|++++++.+.........|+|+||+|.+++
T Consensus 372 ~~~~~~ta~~~R~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~------- 441 (503)
T 1zr6_A 372 AVSNDETAYAHRD-QLWLWQFYDSIYDYENNTSP--YPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLT------- 441 (503)
T ss_dssp GSCTTTSSCCCTT-CSEEEEEEEEETTTTTCCTT--TTTSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCC-------
T ss_pred CCCcccCCccccc-ceeEEEEEeeeccccCCCcc--chHHHHHHHHHHHHHHHhhCCCCCCceeccCCCcccc-------
Confidence 8888999999998 68888886666 2221 2233456666666555433211124799999999864
Q ss_pred hhhhhhhhHHhhhhhcHHHHHHHHhhcCCCCCCccCCCCCCCc
Q 046361 488 SYIEAATWGVKYFKENFNRLVRVKINVDPGNLFRHEQSIPPVP 530 (539)
Q Consensus 488 ~~~~~~~~~~~yyg~n~~RL~~IK~kyDP~~vF~~~qsi~~~~ 530 (539)
..+|++.|||+||+||++||+||||+|+|+++|+|+|..
T Consensus 442 ----~~~~~~~~yG~n~~RL~~iK~kyDP~~vF~~~~~i~~~~ 480 (503)
T 1zr6_A 442 ----KEEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPIA 480 (503)
T ss_dssp ----HHHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCC
T ss_pred ----cchHHHHHHHhHHHHHHHHHHHhCchhhcCCCCCCCchh
Confidence 137999999999999999999999999999999999853
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=1.2e-63 Score=534.88 Aligned_cols=432 Identities=20% Similarity=0.315 Sum_probs=332.3
Q ss_pred ce-eecCCCcChHHHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCC
Q 046361 46 SN-FYTPNNPSFLSVLESSAQNLRYLVPSMPKPEFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYEGVSYVSQIETP 124 (539)
Q Consensus 46 ~~-v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~s~~~~~~~~ 124 (539)
.+ |++|+++.|+.++. +|+......|.+|++|+|++||+++|++|+++++||++||||||+.+.+... +
T Consensus 13 ~~~v~~p~~~~y~~~~~------~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~~----~ 82 (459)
T 2bvf_A 13 QGEVIYPDDSGFDAIAN------IWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATND----G 82 (459)
T ss_dssp SSEEECTTSTTHHHHHC------CSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTCCS----S
T ss_pred CceEECCCCccHHHHHH------HhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccccC----C
Confidence 44 99999999998642 4666666799999999999999999999999999999999999998876433 6
Q ss_pred eEEEEcCCCCcEEEeCCCCEEEEeCCCCHHHHHHHHHhcCCceEeecCCCCcceeccccCCCccCCCcccccccccceeE
Q 046361 125 FFLLDLAKLRSIEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVD 204 (539)
Q Consensus 125 ~ivIdl~~l~~v~vd~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~~gg~g~~s~~~G~~~d~v~~ 204 (539)
+++|||++||+|++|+++.+|+||||++|.+|+++|.++| +.+++|.|+.+||||+++|||+|+++++||+++|+|++
T Consensus 83 gvvi~l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~G--l~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~ 160 (459)
T 2bvf_A 83 GIVLDLRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKFG--LAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILG 160 (459)
T ss_dssp SEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTTT--EEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEE
T ss_pred eEEEECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHcC--CEecCCCCCCcccceeecCCCCccccccccCHhHhEEE
Confidence 7999999999999999999999999999999999999986 77888999999999999999999999999999999999
Q ss_pred EEEEccCCceec-ccCCCcchhhhhhcccCCCceEEEEEEEEEEeeCCeEEEEEEEecchhhHH--HHHHHHHHHhhcCC
Q 046361 205 ARIVDARGRILD-REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQGAT--EILYKWQQVADNLD 281 (539)
Q Consensus 205 ~~vV~~~G~i~~-~~~~~~dLf~a~rG~~~g~~Givt~~~~k~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 281 (539)
+|||++||++++ +..+|+||||++|||+ |+|||||+++||++|.|+....+.+.|+..+ +. ++++.|+++....|
T Consensus 161 ~~vV~~~G~i~~~~~~~~~dLf~a~rg~~-g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 238 (459)
T 2bvf_A 161 ATLVTATGDVIYCSDDERPELFWAVRGAG-PNFGVVTEVEVQLYELPRKMLAGFITWAPSV-SELAGLLTSLLDALNEMA 238 (459)
T ss_dssp EEEECTTSCEEEEESSSSHHHHHHHHHHG-GGTCEEEEEEEEEEECCCCEEEEEEEECCCH-HHHHHHHHHHHHHHHHTT
T ss_pred EEEEcCCCeEEEeCCCCChhhHhHhhccC-CccEEEEEEEEEEEECCCcEEEEEEEechHH-hhHHHHHHHHHHHHHhCc
Confidence 999999999997 5567899999999988 8999999999999999766666666666432 34 78888888887777
Q ss_pred ccceEEEEEEeccCCCCCCceeEEEEEEEEeCCHHHHHHHhhccCccCC-CCcccccccchHHHHHHHh---cCCCCCCc
Q 046361 282 EHLFIRVIIKLANTGPKGKRTVTTSYNALFLGDAERLLQVMHKKFPELG-LTRNDCIEKSWIKSVLYIA---GYPNYTEP 357 (539)
Q Consensus 282 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 357 (539)
+.+...+.+.. ...+. ..+.+...|.|+.++..+.+.+ |.+++ .....+..++|.+...... .++
T Consensus 239 ~~~~~~~~~~~---~~~~~--~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 307 (459)
T 2bvf_A 239 DHIYPSVFVGV---DENRA--PSVTVCVGHLGGLDIAERDIAR-LRGLGRTVSDSIAVRSYDEVVALNAEVGSFE----- 307 (459)
T ss_dssp TTCCCEEEEEE---CTTCC--EEEEEEEECCSCHHHHHHHHHH-HHTTSCCSEECCEEECHHHHHHHHHHHSCCC-----
T ss_pred HhhccccccCc---ccCCC--ceEEEEEEEeCCHHHHHHHHHH-HHHhCcchhcceeecCHHHHHhcccccccCC-----
Confidence 77644432211 11122 3455667888998776665554 33443 2233455677776333211 111
Q ss_pred hhhhcccccccccccc-ccccccCCCCHHHHHHHHHHHHcCC-Cc-eEEEeecCCCCCCCCCCCCCCcccCCCeEEEEEE
Q 046361 358 EILLEERSLFKSYFKA-KSDFVKEPIAETVLEGLWEMLLEGH-DP-EMIWNPYGGMMSKISEYEIPFPHRKGNLFKIQYL 434 (539)
Q Consensus 358 ~~~~~~~~~~~~~~~~-~s~~~~~~l~~~~i~~~~~~~~~~~-~~-~i~~~~~GG~v~~v~~~~tAfp~R~~~~~~~~~~ 434 (539)
... ..+.. ++.++.+.++++.++.+++.+.+.+ .. .+.++.+||++.+ .+.+||+||+ ..| +++.
T Consensus 308 -------~~~-~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~--~~~ta~~~R~-~~~-~~~~ 375 (459)
T 2bvf_A 308 -------DGM-SNLWIDREIAMPNARFAEAIAGNLDKFVSEPASGGSVKLEIEGMPFGN--PKRTPARHRD-AMG-VLAL 375 (459)
T ss_dssp -------CSC-EEEEEEEEECSCHHHHHHHHHTTGGGCEEETTTTEEEEEEEECCCCCC--TTCCSSCCCS-SCE-EEEE
T ss_pred -------CCC-cceEeccccccCCCCCHHHHHHHHHHHhhCCCCCceeEEEEeCCccCC--CCCCCcccCC-cce-EEEE
Confidence 011 12222 4555543355566666666665433 33 3455555887776 6678999999 467 8889
Q ss_pred cccCCCCChhhHHHHHHHHHHHHhhcCcccCCCCcccccccCccccCCCCCCchhhhhhhhHHhhhhhc-HHHHHHHHhh
Q 046361 435 TGWKDGDNRTATKHIEGIRRIYDYMAPYVSMFPRAAYVNYRDLDLGMNKKCNTSYIEAATWGVKYFKEN-FNRLVRVKIN 513 (539)
Q Consensus 435 ~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~yyg~n-~~RL~~IK~k 513 (539)
..|.++.. .++...+|++.+++.+.++......|+|+||+|.+.+ +|.+.|||+| |+||++||+|
T Consensus 376 ~~w~~~~~-~~~~~~~~~~~~~~~l~~~~~~p~~g~Y~N~~d~~~~-------------~~~~~~yG~~n~~rL~~iK~k 441 (459)
T 2bvf_A 376 AEWSGAAP-GSEKYPELARELDAALLRAGVTTSGFGLLNNNSEVTA-------------EMVAEVYKPEVYSRLAAVKRE 441 (459)
T ss_dssp EEECTTST-TTTHHHHHHHHHHHHHHHTTCEEEEECCGGGCSSCCH-------------HHHHHHHCHHHHHHHHHHHHH
T ss_pred EEeCCCcc-chHHHHHHHHHHHHHhcccccCCCCCeeeCCCCCcch-------------HHHHHHhCcchHHHHHHHHHH
Confidence 99986641 2345788999999999887421135899999998732 7999999987 9999999999
Q ss_pred cCCCCCCccCCCCCC
Q 046361 514 VDPGNLFRHEQSIPP 528 (539)
Q Consensus 514 yDP~~vF~~~qsi~~ 528 (539)
|||+|+|+++|+|+|
T Consensus 442 yDP~~vF~~~~~I~p 456 (459)
T 2bvf_A 442 YDPENRFRHNYNIDP 456 (459)
T ss_dssp HCTTCCCCSSSCCCC
T ss_pred hCcccccCCCCCCCC
Confidence 999999999999998
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=3.1e-41 Score=367.70 Aligned_cols=222 Identities=16% Similarity=0.211 Sum_probs=176.1
Q ss_pred ccccHHHHhhhcCCCCCCCce-eecCCCcChHHHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHh--c-CCe
Q 046361 27 ILNNFIKCLTANSEVYIPFSN-FYTPNNPSFLSVLESSAQNLRYLVPSMPKPEFIFTPLTESHLQAAVICSRH--L-RIH 102 (539)
Q Consensus 27 ~~~~~~~~l~~~~~~~~~~~~-v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~--~-~~~ 102 (539)
..+++.+||..... .+ |.+ +...+.. +...|+......|.+|++|+|++||+++|++|++ + ++|
T Consensus 30 ~~~~~~~~l~~~~~-----~~~v~~-~~~~~~~------~~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~ 97 (534)
T 1w1o_A 30 RGRPWPASLAALAL-----DGKLRT-DSNATAA------ASTDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYT 97 (534)
T ss_dssp ----------CTTT-----TTCEEC-SHHHHHH------TSCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCC
T ss_pred chHHHHHHHHhcCC-----CceEec-CHHHHHH------HhccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCce
Confidence 56688888877432 22 444 2223322 2234666666799999999999999999999998 6 999
Q ss_pred EEEEeCCCCCCCCccccCCCCCeEEEEcCCCCcE------EEeCCCCEEEEeCCCCHHHHHHHHHhcCCceEeec-CCCC
Q 046361 103 LRARSGGHDYEGVSYVSQIETPFFLLDLAKLRSI------EVDINNKTAWVQAGATIGELYYRISEKSNIHGFAA-GLCP 175 (539)
Q Consensus 103 v~v~ggGh~~~g~s~~~~~~~~~ivIdl~~l~~v------~vd~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~-g~~~ 175 (539)
|++||||||+.|.+.+. ++++|||++||+| ++|+++.+|+||||++|.+|++++.++| +..+. +.+.
T Consensus 98 v~~~G~G~~~~g~~~~~----~gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~G--l~~~~~~~~~ 171 (534)
T 1w1o_A 98 IAFRGRGHSLMGQAFAP----GGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARG--VAPRSWTDYL 171 (534)
T ss_dssp EEEESSCCCSSSTTCCT----TSEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTT--EEESCCCSSC
T ss_pred EEEECCCCCCCCCcCCC----CeEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCC--CcccCCCCCC
Confidence 99999999999877654 5799999999984 8898889999999999999999999997 43333 4446
Q ss_pred cceeccccCCCccCCCcccccccccceeEEEEEccCCceec-ccCCCcchhhhhhcccCCCceEEEEEEEEEEeeCCeEE
Q 046361 176 SVGIGGHITGGGYGTMMRKYGLAADNVVDARIVDARGRILD-REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVT 254 (539)
Q Consensus 176 ~vgvgG~~~~gg~g~~s~~~G~~~d~v~~~~vV~~~G~i~~-~~~~~~dLf~a~rG~~~g~~Givt~~~~k~~p~~~~~~ 254 (539)
.++|||.+++||+|..+.+||.++|+|+++|||++||++++ +..+|+||||++|||+ |+|||||+++||++|.|+...
T Consensus 172 ~~tvGG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~~~~~~~dL~~~~rGs~-G~~GIVt~~~l~l~p~~~~~~ 250 (534)
T 1w1o_A 172 YLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGL-GQFGVITRARIAVEPAPARAR 250 (534)
T ss_dssp CSBHHHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTCT-TCSEEEEEEEEEEEECCSEEE
T ss_pred CEEeceeccCCCccccccccccHhhhEEEEEEEeCCccEEEECCCCChhhHhhhcCCC-CCcEEEEEEEEEEEECCcceE
Confidence 78999999999999999999999999999999999999997 5567899999999998 899999999999999999777
Q ss_pred EEEEEecchhhHH
Q 046361 255 VFTVSKTLEQGAT 267 (539)
Q Consensus 255 ~~~~~~~~~~~~~ 267 (539)
++.+.|...+.+.
T Consensus 251 ~~~~~~~~~~~~~ 263 (534)
T 1w1o_A 251 WVRFVYTDFAAFS 263 (534)
T ss_dssp EEEEEESCHHHHH
T ss_pred EEEEEeCCHHHHH
Confidence 7777776443333
No 12
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=1e-33 Score=306.96 Aligned_cols=199 Identities=22% Similarity=0.295 Sum_probs=169.0
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHh-cCCeEEEEeCCCCCCCCccccCCCCCeEEEEcCCCCcEEEeC-----C
Q 046361 68 RYLVPSMPKPEFIFTPLTESHLQAAVICSRH-LRIHLRARSGGHDYEGVSYVSQIETPFFLLDLAKLRSIEVDI-----N 141 (539)
Q Consensus 68 r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~-~~~~v~v~ggGh~~~g~s~~~~~~~~~ivIdl~~l~~v~vd~-----~ 141 (539)
.|.......|.+|++|+|++||+++|++|++ +++||++||||||+.|.+.+. ++++|||++||+|++|+ +
T Consensus 53 d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~~~----~gvvidl~~m~~i~i~~~~~~~~ 128 (524)
T 2exr_A 53 DFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMAE----GGLVVDMSTTAENHFEVGYLSGG 128 (524)
T ss_dssp CTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTCCT----TSEEEEGGGGTTSCEEEEECCSS
T ss_pred cccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcccCC----CEEEEECcCCCCcEEeecccCCC
Confidence 4665566789999999999999999999996 999999999999999877654 57999999999987776 5
Q ss_pred C--CEEEEeCCCCHHHHHHHHH-hcCCceEee-cCCCCcceeccccCCCccCCCcccccccccceeEEEEEccCCceec-
Q 046361 142 N--KTAWVQAGATIGELYYRIS-EKSNIHGFA-AGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIVDARGRILD- 216 (539)
Q Consensus 142 ~--~~v~v~aG~~~~~l~~~l~-~~g~~l~~~-~g~~~~vgvgG~~~~gg~g~~s~~~G~~~d~v~~~~vV~~~G~i~~- 216 (539)
+ .+|+||||+++.++++.+. ++| +..+ ++.++.++|||+++++|.|..+.+||.++|+|++++||++||++++
T Consensus 129 ~~~~~v~v~aGv~~~~l~~~~l~~~G--l~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~ 206 (524)
T 2exr_A 129 DATAFVDVSGGALWEDVLKRCVSEYG--LAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTC 206 (524)
T ss_dssp SSSEEEEEETTCBHHHHHHHHHHHHS--EECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEE
T ss_pred CCceEEEEeCCcCHHHHHHHHHHHcC--CCCCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEE
Confidence 5 7999999999999866655 887 4322 2445678999999999999999999999999999999999999997
Q ss_pred ccCCCcchhhhhhcccCCCceEEEEEEEEEEeeCCeEEEEEEEecchhhHHHHHHHH
Q 046361 217 REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATEILYKW 273 (539)
Q Consensus 217 ~~~~~~dLf~a~rG~~~g~~Givt~~~~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (539)
...+|+||||++||+. |+|||||+++||++|.|+...++.+.|...+.+.+.+..+
T Consensus 207 ~~~~~~dL~~~~~Gs~-GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~~~l 262 (524)
T 2exr_A 207 SEIENSELFFSVLGGL-GQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAEWL 262 (524)
T ss_dssp ESSSSHHHHHHHTTCT-TSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHH
T ss_pred CCCCChhHHhHhhcCC-CccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHHHHH
Confidence 4457899999999998 8999999999999999998777777776554444444433
No 13
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=2.8e-34 Score=319.40 Aligned_cols=204 Identities=24% Similarity=0.256 Sum_probs=178.7
Q ss_pred cCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCcccc-CCCCCeEEEEcCCCCcE-EEeCCCCEEE
Q 046361 69 YLVPSMPKPEFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYEGVSYVS-QIETPFFLLDLAKLRSI-EVDINNKTAW 146 (539)
Q Consensus 69 ~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~s~~~-~~~~~~ivIdl~~l~~v-~vd~~~~~v~ 146 (539)
|....+..|++||+|+|++||+++|++|+++++||++||||||+.|.+.+. +...++|+|||++||+| +||+++.+++
T Consensus 198 ~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~at 277 (658)
T 4bby_A 198 REGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAH 277 (658)
T ss_dssp HSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEE
T ss_pred hCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEE
Confidence 566667799999999999999999999999999999999999988665542 11246899999999998 9999999999
Q ss_pred EeCCCCHHHHHHHHHhcCCceEeecCCCCcceeccccCCCccCCCcccccccccceeEEEEEccCCceec-----ccCCC
Q 046361 147 VQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIVDARGRILD-----REAMG 221 (539)
Q Consensus 147 v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~~gg~g~~s~~~G~~~d~v~~~~vV~~~G~i~~-----~~~~~ 221 (539)
||||+++.+|.++|.++|+.+.+.+++...++|||++++|+.|..+.+||.+.|+|+++|||++||++++ ....+
T Consensus 278 VeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k~~aG 357 (658)
T 4bby_A 278 VEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMSTG 357 (658)
T ss_dssp EETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSSCCSS
T ss_pred EecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccccCCC
Confidence 9999999999999999986555556888889999999999999999999999999999999999999985 23467
Q ss_pred cchhhhhhcccCCCceEEEEEEEEEEeeCCeEEEEEEEecchhhHHHHHHHH
Q 046361 222 EDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATEILYKW 273 (539)
Q Consensus 222 ~dLf~a~rG~~~g~~Givt~~~~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (539)
+||+|+++|+. |+|||||+++||++|.|+....+.+.|+..+++.+++..+
T Consensus 358 yDL~~L~iGSE-GTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av~~i 408 (658)
T 4bby_A 358 PDIHHFIMGSE-GTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLREI 408 (658)
T ss_dssp SCTHHHHTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHH
T ss_pred cCHHHHhccCC-CcCcceeeeeeeeccCCccccccccccCCchhhhhhHHHH
Confidence 89999999998 8999999999999999998887778777655555555444
No 14
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=3.8e-32 Score=290.99 Aligned_cols=197 Identities=19% Similarity=0.229 Sum_probs=166.9
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHhc--CCeEEEEeCCCCCCCCccccCCCCCeEEEEcCCCCcE-EEeCCCCE
Q 046361 68 RYLVPSMPKPEFIFTPLTESHLQAAVICSRHL--RIHLRARSGGHDYEGVSYVSQIETPFFLLDLAKLRSI-EVDINNKT 144 (539)
Q Consensus 68 r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~--~~~v~v~ggGh~~~g~s~~~~~~~~~ivIdl~~l~~v-~vd~~~~~ 144 (539)
+|.. ....|.+|++|+|++||+++|++|+++ ++||+++|+|||+.+.+... ++++|||++||+| ++|+++++
T Consensus 35 ~W~~-~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~~----~gvvIdl~~l~~i~~~d~~~~~ 109 (481)
T 4feh_A 35 GWGR-TAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQNG----GGLVIDMTPLNTIHSIDADTKL 109 (481)
T ss_dssp CTTC-CSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCCT----TSEEEECTTCCCEEEEETTTTE
T ss_pred cccC-CCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCCc----CeEEEECccCCCceEEcCCCCE
Confidence 4743 477999999999999999999999999 79999999999997765433 5799999999999 99999999
Q ss_pred EEEeCCCCHHHHHHHHHhcCCceEeec-CCCCcceeccccCCCccCCCcccccccccceeEEEEEccCCceec-ccC-CC
Q 046361 145 AWVQAGATIGELYYRISEKSNIHGFAA-GLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIVDARGRILD-REA-MG 221 (539)
Q Consensus 145 v~v~aG~~~~~l~~~l~~~g~~l~~~~-g~~~~vgvgG~~~~gg~g~~s~~~G~~~d~v~~~~vV~~~G~i~~-~~~-~~ 221 (539)
|+||||+++.+|.+.|.++|+ .++. +....++|||.+++|++|..+..||.++|+|++++||++||++++ +.. +|
T Consensus 110 v~v~aGv~l~~L~~~l~~~Gl--~l~~~~g~~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~~~ 187 (481)
T 4feh_A 110 VDIDAGVNLDQLMKAALPFGL--WVPVLPGTRQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTGED 187 (481)
T ss_dssp EEEETTCBHHHHHHHHGGGTE--ECSCCCSCSCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSSTT
T ss_pred EEEcCCccHHHHHHHHHHcCC--EEEEeCCcCccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCCCC
Confidence 999999999999999999984 4442 333568999999999999999999999999999999999999997 445 78
Q ss_pred cchhhhhhcccCCCceEEEEEEEEEEeeCCeEEEE-EEEecchhhHHHHHHHHHH
Q 046361 222 EDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVF-TVSKTLEQGATEILYKWQQ 275 (539)
Q Consensus 222 ~dLf~a~rG~~~g~~Givt~~~~k~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 275 (539)
+||||++|||. |+|||||+++||++|.|+..... ...+. ...++++.+++
T Consensus 188 ~dLf~a~rgs~-G~~GIIt~~tl~l~p~~~~~~~~~~~~~~---~l~~~~~~~~~ 238 (481)
T 4feh_A 188 AELFWATVGGN-GLTGIIMRATIEMTPTSTAYFIADGDVTA---SLDETIALHSD 238 (481)
T ss_dssp HHHHHHHTTCT-TTTCEEEEEEEECEECSCSEEEEEEEECS---SHHHHHHHHSS
T ss_pred hHHHHHhhccC-CCceEEEEEEEEEEeCCccEEEEEEEeCC---CHHHHHHHHHH
Confidence 99999999998 89999999999999998644332 22222 24455666653
No 15
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.2e-32 Score=294.77 Aligned_cols=205 Identities=24% Similarity=0.316 Sum_probs=178.8
Q ss_pred cccCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCeEEEEcCCCCcE-EEeCCCCEE
Q 046361 67 LRYLVPSMPKPEFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYEGVSYVSQIETPFFLLDLAKLRSI-EVDINNKTA 145 (539)
Q Consensus 67 ~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~s~~~~~~~~~ivIdl~~l~~v-~vd~~~~~v 145 (539)
..|+......|.+|++|+|++||+++|++|+++++||+++|||||+.|.+.+. .++++|||++||+| ++|+++.+|
T Consensus 42 ~d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~~---~ggvvIdl~~m~~i~~id~~~~~v 118 (476)
T 3pm9_A 42 TEERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPH---NGEVVISLKRMDKIREIDTSSNTI 118 (476)
T ss_dssp BCTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCCC---SSCEEEECTTCCCEEEEETTTTEE
T ss_pred cccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccCC---CCcEEEEeeCCCceEEEcCCCCeE
Confidence 34665566799999999999999999999999999999999999999887764 25899999999999 899999999
Q ss_pred EEeCCCCHHHHHHHHHhcCCceEeecCCCCcceeccccCCCccCCCcccccccccceeEEEEEccCCceec------ccC
Q 046361 146 WVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIVDARGRILD------REA 219 (539)
Q Consensus 146 ~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~~gg~g~~s~~~G~~~d~v~~~~vV~~~G~i~~------~~~ 219 (539)
+||||++|.+|+++|.++|+.+.+.++.+..++|||+++++++|..+.+||.++|+|+++|||++||++++ .+.
T Consensus 119 ~V~aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~ 198 (476)
T 3pm9_A 119 TVEAGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKDN 198 (476)
T ss_dssp EEETTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCSCCC
T ss_pred EECCCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCcccCCC
Confidence 99999999999999999985333344777789999999999999999999999999999999999999985 234
Q ss_pred CCcchhhhhhcccCCCceEEEEEEEEEEeeCCeEEEEEEEecchhhHHHHHHHHHH
Q 046361 220 MGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATEILYKWQQ 275 (539)
Q Consensus 220 ~~~dLf~a~rG~~~g~~Givt~~~~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (539)
.++||+|+++|+. |+|||||+++||++|.|+....+.+.|+..+++.+++..+++
T Consensus 199 ~g~dl~~l~~Gs~-GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 199 TGYDLRDLFIGAE-GTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQG 253 (476)
T ss_dssp SSCCCHHHHTTST-TSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred CCcCHHHHhccCC-CCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHH
Confidence 5689999999988 899999999999999999877777777765556666666654
No 16
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.98 E-value=5.2e-32 Score=296.10 Aligned_cols=201 Identities=21% Similarity=0.255 Sum_probs=169.2
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCeEEEEcCCCCcE-EEeCCCCEEEEeCCC
Q 046361 73 SMPKPEFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYEGVSYVSQIETPFFLLDLAKLRSI-EVDINNKTAWVQAGA 151 (539)
Q Consensus 73 ~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~s~~~~~~~~~ivIdl~~l~~v-~vd~~~~~v~v~aG~ 151 (539)
....|.+|++|+|++||+++|++|+++++||+++|||||+.|.+.+..+.+++++|||++||+| ++|+++.+|+||||+
T Consensus 134 ~~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv 213 (584)
T 2uuu_A 134 VKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGI 213 (584)
T ss_dssp CCCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTC
T ss_pred cCCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCC
Confidence 3468999999999999999999999999999999999999887765322236899999999999 899999999999999
Q ss_pred CHHHHHHHHHhcCCceEeecCCCCcceeccccCCCccCCCcccccccccceeEEEEEccCCceec----ccCCCcchhhh
Q 046361 152 TIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIVDARGRILD----REAMGEDLFWA 227 (539)
Q Consensus 152 ~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~~gg~g~~s~~~G~~~d~v~~~~vV~~~G~i~~----~~~~~~dLf~a 227 (539)
++.+|+++|.++|+.+...+++...++|||++++|++|..+.+||.++|+|+++|||++||++++ ++..++||+|+
T Consensus 214 ~~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~~~ 293 (584)
T 2uuu_A 214 MGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKHI 293 (584)
T ss_dssp BHHHHHHHHHHTTEECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTHHH
T ss_pred cHHHHHHHHHHcCCeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchhhh
Confidence 99999999999974322222334457999999999999999999999999999999999999886 34578999999
Q ss_pred hhcccCCCceEEEEEEEEEEeeCCeEEEEEEEecchhhHHHHHHHHH
Q 046361 228 IRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATEILYKWQ 274 (539)
Q Consensus 228 ~rG~~~g~~Givt~~~~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (539)
++|+. |+|||||+++||++|.|+....+.+.|+..+.+.+++..+.
T Consensus 294 ~~Gse-GtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 339 (584)
T 2uuu_A 294 ILGSE-GTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIR 339 (584)
T ss_dssp HTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHH
T ss_pred hccCC-CCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHHH
Confidence 99998 89999999999999999977777777765444445554444
No 17
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.97 E-value=6.4e-30 Score=277.59 Aligned_cols=198 Identities=23% Similarity=0.286 Sum_probs=166.7
Q ss_pred CCCceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCC-CCccccCCCCCeEEEEcCCCCcE-EEeCCCCEEEEeCCC
Q 046361 74 MPKPEFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYE-GVSYVSQIETPFFLLDLAKLRSI-EVDINNKTAWVQAGA 151 (539)
Q Consensus 74 ~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~-g~s~~~~~~~~~ivIdl~~l~~v-~vd~~~~~v~v~aG~ 151 (539)
...|.+|++|+|++||+++|++|+++++||+++|+|||+. |.+... ..++++|||++||+| ++|+++.+|+||||+
T Consensus 54 ~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~--~~~gvvidl~~m~~i~~id~~~~~v~v~aGv 131 (520)
T 1wvf_A 54 AHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPV--QRGQVILDLKKMNKIIKIDPEMCYALVEPGV 131 (520)
T ss_dssp GGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCS--STTCEEEECTTCCCEEEEETTTTEEEECTTC
T ss_pred CCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCC--CCCeEEEECCCCCceEEECCCCCEEEECCCC
Confidence 4589999999999999999999999999999999999986 654431 126899999999999 999999999999999
Q ss_pred CHHHHHHHHHhcCCceEeecC---CCCcceeccccCCCccCCCcccccccccceeEEEEEccCCceecc---cCCCcchh
Q 046361 152 TIGELYYRISEKSNIHGFAAG---LCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIVDARGRILDR---EAMGEDLF 225 (539)
Q Consensus 152 ~~~~l~~~l~~~g~~l~~~~g---~~~~vgvgG~~~~gg~g~~s~~~G~~~d~v~~~~vV~~~G~i~~~---~~~~~dLf 225 (539)
++.+|+++|.++|+. ++++ ....+||||++++||.|.. +||.++|+|+++|||++||++++. ...++|+|
T Consensus 132 ~~~~l~~~l~~~Gl~--~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~ 207 (520)
T 1wvf_A 132 TFGQMYDYIQENNLP--VMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTW 207 (520)
T ss_dssp CHHHHHHHHHHTTCS--EECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSCT
T ss_pred CHHHHHHHHHHcCCc--ccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchhH
Confidence 999999999999864 4433 3337889999988888886 999999999999999999999973 23578988
Q ss_pred hhhhcccC---------CCceEEEEEEEEEEeeCCeEEEEEEEecchhhHHHHHHHHHHHh
Q 046361 226 WAIRGGGG---------GSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATEILYKWQQVA 277 (539)
Q Consensus 226 ~a~rG~~~---------g~~Givt~~~~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (539)
++.+|+.| ++|||||+++||++|.|+....+.+.|+..+++.++++.++++.
T Consensus 208 ~~~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~~~~~~~~~~ 268 (520)
T 1wvf_A 208 QIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRPLR 268 (520)
T ss_dssp TTCSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHHHHHHHHHHH
T ss_pred hhhcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 77777652 59999999999999999987777788876555556666666554
No 18
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.96 E-value=1.8e-28 Score=268.02 Aligned_cols=200 Identities=15% Similarity=0.136 Sum_probs=165.5
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCC-CCccc-cCCCCCeEEEEc-CCCCcE-EEeCCCCEEEEe
Q 046361 73 SMPKPEFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYE-GVSYV-SQIETPFFLLDL-AKLRSI-EVDINNKTAWVQ 148 (539)
Q Consensus 73 ~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~-g~s~~-~~~~~~~ivIdl-~~l~~v-~vd~~~~~v~v~ 148 (539)
....|.+||+|+|++||+++|++|+++++||++||+|||+. |.+.+ . .++++||| ++||+| ++|+++.+|+||
T Consensus 67 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~---~~gvvidl~~~mn~il~id~~~~~v~v~ 143 (560)
T 1e8g_A 67 DYFLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRV---SGSVVLDMGKNMNRVLEVNVEGAYCVVE 143 (560)
T ss_dssp TSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSS---TTCEEEECTTTCCCEEEEETTTTEEEEC
T ss_pred cccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCc---CCEEEEEchHhcCCeEEEcCCCCEEEEe
Confidence 34689999999999999999999999999999999999986 65443 2 25799999 999999 999999999999
Q ss_pred CCCCHHHHHHHHHhcCCc--eEeecCCCCcceeccccCCCccCCCcccccccccceeEEEEEccCCceeccc---CCCc-
Q 046361 149 AGATIGELYYRISEKSNI--HGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIVDARGRILDRE---AMGE- 222 (539)
Q Consensus 149 aG~~~~~l~~~l~~~g~~--l~~~~g~~~~vgvgG~~~~gg~g~~s~~~G~~~d~v~~~~vV~~~G~i~~~~---~~~~- 222 (539)
||+++.+|.++|.++|+. +.+.++....+||||++++||.|.. +||..+|+|+++|||++||++++.. ..++
T Consensus 144 aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~ 221 (560)
T 1e8g_A 144 PGVTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPK 221 (560)
T ss_dssp TTCBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCC
T ss_pred CCCCHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCccc
Confidence 999999999999999865 4433455456889999888888875 9999999999999999999999622 2231
Q ss_pred --------------chhhhhhcc----------cCCCceEEEEEEEEEEeeCCeEEEEEEEecchhhHHHHHHHHHHHh
Q 046361 223 --------------DLFWAIRGG----------GGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATEILYKWQQVA 277 (539)
Q Consensus 223 --------------dLf~a~rG~----------~~g~~Givt~~~~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (539)
+++|+++++ .+|+|||||+++||++|.|+....+.+.|+..+++.+++..++++.
T Consensus 222 ~~~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~ 300 (560)
T 1e8g_A 222 RPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLR 300 (560)
T ss_dssp CGGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHH
T ss_pred ccccccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 566666543 2379999999999999999988778888876666666666666654
No 19
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.96 E-value=2.2e-29 Score=274.92 Aligned_cols=198 Identities=15% Similarity=0.147 Sum_probs=165.8
Q ss_pred eecC-CCcChHHHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCC-CCCe
Q 046361 48 FYTP-NNPSFLSVLESSAQNLRYLVPSMPKPEFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYEGVSYVSQI-ETPF 125 (539)
Q Consensus 48 v~~p-~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~s~~~~~-~~~~ 125 (539)
+++| +++.|+.. ..+|+.+....|.+|++|+|++||+++|++|+++++||+++|+|||+.+.+...+. ..++
T Consensus 12 ~~~p~~~~~y~~~------~~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~~~g 85 (561)
T 2i0k_A 12 PNFPNDIALFQQA------YQNWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANVEKV 85 (561)
T ss_dssp TTCCTTSCCEEEE------EECTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCCTTE
T ss_pred eecCCCCHhHHHH------HhhhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcCCCe
Confidence 8888 99999874 24588777789999999999999999999999999999999999999765543311 1258
Q ss_pred EEEEc-CCCCcEEEeC--CCCEEEEeCCCCHHHHHHHHHhcCCceEeec-CCCCcceeccccCCCccCCC----------
Q 046361 126 FLLDL-AKLRSIEVDI--NNKTAWVQAGATIGELYYRISEKSNIHGFAA-GLCPSVGIGGHITGGGYGTM---------- 191 (539)
Q Consensus 126 ivIdl-~~l~~v~vd~--~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~-g~~~~vgvgG~~~~gg~g~~---------- 191 (539)
++||| ++||+|++|+ ++++|+||||+++.+|.++|.++|+ .++. +..+.++|||.+.+|++|..
T Consensus 86 vvIdl~~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~Gl--~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~~~~s 163 (561)
T 2i0k_A 86 ILADTMTHLNGITVNTGGPVATVTAGAGASIEAIVTELQKHDL--GWANLPAPGVLSIGGALAVNAHGAALPAVGQTTLP 163 (561)
T ss_dssp EEEECTTTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTTE--ECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCCCCT
T ss_pred EEEechhhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcCC--cccccCCCCCcccCCCcccCCcccccccCCccccc
Confidence 99999 8999999998 7899999999999999999999985 4444 33466889999888877775
Q ss_pred cccccccccceeEEEEEccCCc---eecccCCCcchhhhhhcccCCCceEEEEEEEEEEeeCCeEEEE
Q 046361 192 MRKYGLAADNVVDARIVDARGR---ILDREAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVF 256 (539)
Q Consensus 192 s~~~G~~~d~v~~~~vV~~~G~---i~~~~~~~~dLf~a~rG~~~g~~Givt~~~~k~~p~~~~~~~~ 256 (539)
+.+||.++|+|+++|||++||+ +++...+++||+|+++|.| . ||||+++||++|.++.....
T Consensus 164 ~~~~G~~~d~V~~~evV~~dG~~~~~~~~~~~~~dl~~a~~g~G--~-giIt~~tl~l~p~~~~~~~~ 228 (561)
T 2i0k_A 164 GHTYGSLSNLVTELTAVVWNGTTYALETYQRNDPRITPLLTNLG--R-CFLTSVTMQAGPNFRQRCQS 228 (561)
T ss_dssp TCCSSCGGGGEEEEEEEEECSSSEEEEEEETTSGGGHHHHSCTT--S-SCEEEEEEECEECCEEEEEE
T ss_pred ccccccHhheEEEEEEEeCCCCEEEeeeccCCCccHHHHHhcCC--C-EEEEEEEEEEEECCceEEEE
Confidence 6789999999999999999999 6654445889999998654 3 89999999999998754443
No 20
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=99.96 E-value=5.5e-29 Score=263.63 Aligned_cols=176 Identities=20% Similarity=0.268 Sum_probs=156.4
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCeEEEEcCCCCcE-EEeCCCCEEE
Q 046361 68 RYLVPSMPKPEFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYEGVSYVSQIETPFFLLDLAKLRSI-EVDINNKTAW 146 (539)
Q Consensus 68 r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~s~~~~~~~~~ivIdl~~l~~v-~vd~~~~~v~ 146 (539)
.|+......|.+|++|+|++||+++|++| +|++++|+|||+.+.+... .++++|||++||+| ++|+++++|+
T Consensus 12 ~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~~---~~g~vi~l~~l~~i~~~d~~~~~v~ 84 (422)
T 2vfr_A 12 NWAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEPG---DGGVLLSLAGLPSVVDVDTAARTVR 84 (422)
T ss_dssp CSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCCC---TTCEEECSTTSCCCEEEETTTTEEE
T ss_pred cCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccCC---CCcEEEEhhhCCCcEEEcCCCCEEE
Confidence 48777778999999999999999999999 8999999999999877632 26899999999998 9999999999
Q ss_pred EeCCCCHHHHHHHHHhcCCceEeec-CCCCcceeccccCCCccCCCcccccccccceeEEEEEccCCceec-ccCCCcch
Q 046361 147 VQAGATIGELYYRISEKSNIHGFAA-GLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIVDARGRILD-REAMGEDL 224 (539)
Q Consensus 147 v~aG~~~~~l~~~l~~~g~~l~~~~-g~~~~vgvgG~~~~gg~g~~s~~~G~~~d~v~~~~vV~~~G~i~~-~~~~~~dL 224 (539)
||||+++.+|.++|.++|+ .++. +.++.++|||.+++|++|.. .+||.++|+|+++++|++||++++ ...+|+
T Consensus 85 v~aG~~l~~l~~~l~~~Gl--~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~~-- 159 (422)
T 2vfr_A 85 VGGGVRYAELARVVHARGL--ALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGDER-- 159 (422)
T ss_dssp EETTCBHHHHHHHHHHTTE--ECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTSTT--
T ss_pred EcCCCCHHHHHHHHHHcCC--cccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCCCC--
Confidence 9999999999999999985 4554 78888999999999999986 699999999999999999999997 444454
Q ss_pred hhhhhcccCCCceEEEEEEEEEEeeCCeEEEE
Q 046361 225 FWAIRGGGGGSFGIILAWKVKLVPVPATVTVF 256 (539)
Q Consensus 225 f~a~rG~~~g~~Givt~~~~k~~p~~~~~~~~ 256 (539)
||+++|+. |++||||+++||++|.|+.....
T Consensus 160 f~~~~g~~-G~lGvit~~~l~l~p~~~~~~~~ 190 (422)
T 2vfr_A 160 FGGAVTSL-GALGVVTSLTLDLEPAYEMEQHV 190 (422)
T ss_dssp GGGTSSCT-TTTCEEEEEEEECEECCEEEEEE
T ss_pred cceEEecC-CCCEEEEEEEEEEEecCceEEEE
Confidence 99999988 89999999999999998765443
No 21
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.96 E-value=1e-28 Score=264.57 Aligned_cols=181 Identities=16% Similarity=0.186 Sum_probs=151.5
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccC-CCCCeEEEEcC-CCCcEEEeCC--CC
Q 046361 68 RYLVPSMPKPEFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYEGVSYVSQ-IETPFFLLDLA-KLRSIEVDIN--NK 143 (539)
Q Consensus 68 r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~s~~~~-~~~~~ivIdl~-~l~~v~vd~~--~~ 143 (539)
+|+.+....|.+|++|+|++||+++|++|+++++||+++|+|||+.+.+...+ ...++++|||+ +||+|++|++ .+
T Consensus 21 nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdls~~Ln~I~vD~~~~~~ 100 (540)
T 3js8_A 21 NWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDTTRYLTAMSIDASGPVA 100 (540)
T ss_dssp CTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEETTTTCCCEEEECSSSSE
T ss_pred ccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEEEECcCcCCCEEECCCCCcc
Confidence 48888888999999999999999999999999999999999999963332211 01368999995 7999999985 58
Q ss_pred EEEEeCCCCHHHHHHHHHhcCCceEeec-CCCCcceeccccCCCccCCC----------cccccccccceeEEEEEccCC
Q 046361 144 TAWVQAGATIGELYYRISEKSNIHGFAA-GLCPSVGIGGHITGGGYGTM----------MRKYGLAADNVVDARIVDARG 212 (539)
Q Consensus 144 ~v~v~aG~~~~~l~~~l~~~g~~l~~~~-g~~~~vgvgG~~~~gg~g~~----------s~~~G~~~d~v~~~~vV~~~G 212 (539)
+|+||||+++.+|+++|.++| +.++. +.++.++|||.+++|++|.. +.+||.++|+|++++||++||
T Consensus 101 tVtV~AGv~l~~L~~~L~~~G--L~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~V~~levV~adG 178 (540)
T 3js8_A 101 KVTAQAGITMEALLTGLEKAG--LGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVLSLTAVVYDK 178 (540)
T ss_dssp EEEEETTSBHHHHHHHHHHTT--EECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEEEEEEEEEET
T ss_pred EEEEccCCCHHHHHHHHHHcC--CEEEecCCCCCeEEcccccCCCCcccccccccccccccccccHHHhEEEEEEEcCCC
Confidence 999999999999999999997 45553 34567899999999998886 589999999999999999999
Q ss_pred c-----eecccCCCcchhhhhhcccCCCceEEEEEEEEEEeeCCeE
Q 046361 213 R-----ILDREAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATV 253 (539)
Q Consensus 213 ~-----i~~~~~~~~dLf~a~rG~~~g~~Givt~~~~k~~p~~~~~ 253 (539)
+ +++...+++||+ ++|+|. |. ||||+++||++|.++..
T Consensus 179 ~~~~~~i~~~s~~~~DL~-a~r~G~-G~-gIVTevtlrl~P~~~l~ 221 (540)
T 3js8_A 179 ASGAYALRKFARNDPQIA-PLLAHV-GR-SLIVEATLQAAPNQRLR 221 (540)
T ss_dssp TTTEEEEEEEETTSGGGH-HHHTCT-TS-SCEEEEEEEEEECCEEE
T ss_pred CCceeeEEEeCCCChhHH-HHHhcC-CC-eEEEEEEEEEEECCceE
Confidence 8 665444789985 556666 55 69999999999988643
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.95 E-value=1.2e-28 Score=267.76 Aligned_cols=197 Identities=12% Similarity=0.108 Sum_probs=164.6
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCC--CCeEEEEcCCCCcE-EEeCCCCEEEEeC
Q 046361 73 SMPKPEFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYEGVSYVSQIE--TPFFLLDLAKLRSI-EVDINNKTAWVQA 149 (539)
Q Consensus 73 ~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~s~~~~~~--~~~ivIdl~~l~~v-~vd~~~~~v~v~a 149 (539)
....|.+|++|+|++||+++|++|+++++||+++|||||+.|.+.+.+++ .++++|||++||+| ++|+ +++|+|||
T Consensus 42 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~a 120 (571)
T 1f0x_A 42 GQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYP 120 (571)
T ss_dssp CBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEEEECT
T ss_pred cCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CCeEEEcC
Confidence 34689999999999999999999999999999999999999887765210 13899999999999 7985 58999999
Q ss_pred CCCHHHHHHHHHhcCCceEeec---CCCCcceeccccCCCccCCCccccccccc----------------ceeEEEEEcc
Q 046361 150 GATIGELYYRISEKSNIHGFAA---GLCPSVGIGGHITGGGYGTMMRKYGLAAD----------------NVVDARIVDA 210 (539)
Q Consensus 150 G~~~~~l~~~l~~~g~~l~~~~---g~~~~vgvgG~~~~gg~g~~s~~~G~~~d----------------~v~~~~vV~~ 210 (539)
|+++.+|.++|.++|+ .++. +.|..++|||.+++|++|..+.+||..+| +|++++||++
T Consensus 121 Gv~l~~L~~~l~~~Gl--~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~ 198 (571)
T 1f0x_A 121 GTTLYSLEKALKPLGR--EPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGET 198 (571)
T ss_dssp TCBHHHHHHHHGGGTE--ECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSS
T ss_pred CcCHHHHHHHHHhcCc--cCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEEEEcC
Confidence 9999999999999974 3332 33445689999999999999999999999 9999999999
Q ss_pred CCceec-c-c--------------CCC--c-----------------chhhhh--hcccCCCceEEEEEEEEEEeeCCeE
Q 046361 211 RGRILD-R-E--------------AMG--E-----------------DLFWAI--RGGGGGSFGIILAWKVKLVPVPATV 253 (539)
Q Consensus 211 ~G~i~~-~-~--------------~~~--~-----------------dLf~a~--rG~~~g~~Givt~~~~k~~p~~~~~ 253 (539)
||++++ . . +++ + ||+|++ +|+. |+||| |+++||++|.|+..
T Consensus 199 dG~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gse-GtlGV-t~~tl~l~p~p~~~ 276 (571)
T 1f0x_A 199 PEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCA-GKLAV-FAVRLDTFEAEKNQ 276 (571)
T ss_dssp HHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCT-TSSEE-EEEEEECEECCSSC
T ss_pred CCcEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCCC-CceeE-EEEEEEEEecCCeE
Confidence 999985 2 1 222 3 988888 9888 89999 99999999999887
Q ss_pred EEEEEEecchhhHHHHHHHHH
Q 046361 254 TVFTVSKTLEQGATEILYKWQ 274 (539)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~ 274 (539)
..+.+.++..+.+.+++..+.
T Consensus 277 ~~~~~~~~~~~~a~~~~~~~~ 297 (571)
T 1f0x_A 277 QVFYIGTNQPEVLTEIRRHIL 297 (571)
T ss_dssp EEEEEEESCHHHHHHHHHHHH
T ss_pred EEEEEEeCCHHHHHHHHHHHH
Confidence 777777765555555555554
No 23
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.92 E-value=4.2e-25 Score=224.04 Aligned_cols=164 Identities=21% Similarity=0.145 Sum_probs=132.9
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCeEEEEcCCCCcEEEeCCCCEEEEeCCCC
Q 046361 73 SMPKPEFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYEGVSYVSQIETPFFLLDLAKLRSIEVDINNKTAWVQAGAT 152 (539)
Q Consensus 73 ~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~s~~~~~~~~~ivIdl~~l~~v~vd~~~~~v~v~aG~~ 152 (539)
....|.++++|+|++||+++|++|+++++|+.++|+|||+.+.+.+. ++++|||++|++|++| +.+|+||||++
T Consensus 51 igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~~~~----~gvvI~l~~~~~I~~d--~~~v~v~aG~~ 124 (322)
T 3tx1_A 51 TGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGGI----RGVILHLDLLQTIERN--NTQIVAMSGAK 124 (322)
T ss_dssp CCCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECTTCE----EEEEEECTTCCCEEEE--TTEEEEETTSB
T ss_pred cCceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCCCCC----CeEEEECCCCCcEEEC--CCEEEEecCcC
Confidence 34589999999999999999999999999999999999987543222 5899999999999886 45999999999
Q ss_pred HHHHHHHHHhcCC-ceEeecCCCCcceeccccCCCccCCCcccc-cccccceeEEEEEccCCceecccCCCcchhhhhhc
Q 046361 153 IGELYYRISEKSN-IHGFAAGLCPSVGIGGHITGGGYGTMMRKY-GLAADNVVDARIVDARGRILDREAMGEDLFWAIRG 230 (539)
Q Consensus 153 ~~~l~~~l~~~g~-~l~~~~g~~~~vgvgG~~~~gg~g~~s~~~-G~~~d~v~~~~vV~~~G~i~~~~~~~~dLf~a~rG 230 (539)
|.+|.+++.++|+ ++.+..|.+.+ |||.+.+++.| | |.++|+|+++++|++||++++... .|++|++|+
T Consensus 125 ~~~l~~~l~~~Gl~Gle~~~giPgT--VGGav~~NaGg-----yGg~~~d~v~~vevV~~~G~i~~~~~--~~~~~~yR~ 195 (322)
T 3tx1_A 125 LIDTAKFALNESLSGLEFACGIPGS--IGGALHMNAGA-----YGGEISDVLEAATVLTQTGELKKLKR--SELKAAYRF 195 (322)
T ss_dssp HHHHHHHHHHTTEESCGGGTTCCSB--HHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEEG--GGCC--CC-
T ss_pred HHHHHHHHHHcCCcccccCCCCcch--hHHHHHhCccC-----cccchHhhEEEEEEEcCCCCEEEech--HHcCcchhh
Confidence 9999999999985 34456677654 45555433332 3 789999999999999999997432 589999998
Q ss_pred ccCC-CceEEEEEEEEEEeeCC
Q 046361 231 GGGG-SFGIILAWKVKLVPVPA 251 (539)
Q Consensus 231 ~~~g-~~Givt~~~~k~~p~~~ 251 (539)
+..+ .+||||+++||++|.|+
T Consensus 196 s~~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 196 STIAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp CTTTGGGCEEEEEEEECEECCH
T ss_pred cccCCCCEEEEEEEEEEEeCCH
Confidence 7533 57899999999999863
No 24
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.91 E-value=1.7e-24 Score=220.91 Aligned_cols=160 Identities=21% Similarity=0.194 Sum_probs=133.5
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCeEEEEcCCCCcEEEeCCCCEEEEeCCCC
Q 046361 73 SMPKPEFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYEGVSYVSQIETPFFLLDLAKLRSIEVDINNKTAWVQAGAT 152 (539)
Q Consensus 73 ~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~s~~~~~~~~~ivIdl~~l~~v~vd~~~~~v~v~aG~~ 152 (539)
....|.+|++|+|++||+++|++|+++++|++++|||||+.+.+.+. ++++|||++||+|++|. .+++||||++
T Consensus 45 ~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~~~----~gvvI~l~~m~~i~id~--~~v~v~aGv~ 118 (326)
T 1hsk_A 45 TGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGI----RGIVISLLSLDHIEVSD--DAIIAGSGAA 118 (326)
T ss_dssp CCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTCE----EEEEEECTTCCCEEEET--TEEEEETTSB
T ss_pred cCCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCCCC----CeEEEEeCCCCceEEcC--CEEEEeCCCc
Confidence 34579999999999999999999999999999999999987654433 47999999999998873 7999999999
Q ss_pred HHHHHHHHHhcCC-ceEeecCCCCcceeccccCCCccCCCccccc-ccccceeEEEEEccCCceecccCCCcchhhhhhc
Q 046361 153 IGELYYRISEKSN-IHGFAAGLCPSVGIGGHITGGGYGTMMRKYG-LAADNVVDARIVDARGRILDREAMGEDLFWAIRG 230 (539)
Q Consensus 153 ~~~l~~~l~~~g~-~l~~~~g~~~~vgvgG~~~~gg~g~~s~~~G-~~~d~v~~~~vV~~~G~i~~~~~~~~dLf~a~rG 230 (539)
|.+|.+++.++|+ ++.+.++... +|||.+.+++.| || .++|+|++++||++||++++... .|++|++|.
T Consensus 119 ~~~l~~~l~~~Gl~gLe~~~~~Pg--tvGG~i~~nagg-----yG~~~~d~v~~v~vv~~~G~i~~~~~--~~~~~gyr~ 189 (326)
T 1hsk_A 119 IIDVSRVARDYALTGLEFACGIPG--SIGGAVYMNAGA-----YGGEVKDCIDYALCVNEQGSLIKLTT--KELELDYRN 189 (326)
T ss_dssp HHHHHHHHHHTTEESCGGGTTCCS--BHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEET--TTTTCBTTB
T ss_pred HHHHHHHHHHCCCccccccCCCcc--hhhHHHhccccc-----CchhhhhhEEEEEEEeCCCCEEEECh--HHcCCCccc
Confidence 9999999999985 3334444443 577877666544 88 99999999999999999987433 288999997
Q ss_pred cc---CCCceEEEEEEEEEEee
Q 046361 231 GG---GGSFGIILAWKVKLVPV 249 (539)
Q Consensus 231 ~~---~g~~Givt~~~~k~~p~ 249 (539)
.. .| ||||+++||++|.
T Consensus 190 ~~l~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 190 SIIQKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp CHHHHTT--CEEEEEEEECEEC
T ss_pred cccCCCC--EEEEEEEEEEEcC
Confidence 42 13 9999999999997
No 25
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.90 E-value=7.6e-24 Score=216.95 Aligned_cols=165 Identities=14% Similarity=0.027 Sum_probs=141.8
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCeEEEEcCCCCcEEEeC--CCCEEEEeCC
Q 046361 73 SMPKPEFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYEGVSYVSQIETPFFLLDLAKLRSIEVDI--NNKTAWVQAG 150 (539)
Q Consensus 73 ~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~s~~~~~~~~~ivIdl~~l~~v~vd~--~~~~v~v~aG 150 (539)
....|.++++|+|++||+++|++|+++++|+.++|+|||..+.+. . +|+||+++ |++|++++ ++.+|+|+||
T Consensus 27 igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~-~----~GvVI~l~-~~~i~v~~~~~~~~v~v~AG 100 (357)
T 3i99_A 27 IEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH-Y----TGMIVVNR-LNGIEHQQDDDYHRLHVAGG 100 (357)
T ss_dssp CSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC-E----EEEEEEEC-CCCEEEEECSSEEEEEEETT
T ss_pred CCccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC-C----CeEEEEcC-CCceEEeccCCceEEEEeCC
Confidence 345789999999999999999999999999999999999875443 3 57999998 99998753 4568999999
Q ss_pred CCHHHHHHHHHhcCCceEeecCCCCcceeccccCCCccCCCcccccc-cccceeEEEEEcc-CCceecccCCCcchhhhh
Q 046361 151 ATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGL-AADNVVDARIVDA-RGRILDREAMGEDLFWAI 228 (539)
Q Consensus 151 ~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~~gg~g~~s~~~G~-~~d~v~~~~vV~~-~G~i~~~~~~~~dLf~a~ 228 (539)
++|.+|.+++.++|+ .|.+..+||+| ..||+.+++.+.||. ++|+|+++++|++ +|++++.. +.|++|+|
T Consensus 101 ~~~~~l~~~a~~~Gl-----~GlE~l~gIPG-tVGGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~--~~dl~f~Y 172 (357)
T 3i99_A 101 EDWPSLVSWCVEQGI-----GGLENLALIPG-CAGSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLT--MEECQFGY 172 (357)
T ss_dssp SBHHHHHHHHHHTTC-----TTCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGCCBT
T ss_pred CcHHHHHHHHHHcCC-----cCccccCCCCc-hhHHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEe--HHHcCccc
Confidence 999999999999984 35666677777 567788888899997 8999999999999 99999743 35999999
Q ss_pred hcccC----CCceEEEEEEEEEEeeCC
Q 046361 229 RGGGG----GSFGIILAWKVKLVPVPA 251 (539)
Q Consensus 229 rG~~~----g~~Givt~~~~k~~p~~~ 251 (539)
|++.. +++||||+++||++|.++
T Consensus 173 R~s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 173 RDSIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp TBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred ccccCCCccCCCEEEEEEEEEEEeCCc
Confidence 98753 379999999999999764
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.88 E-value=2.3e-22 Score=205.42 Aligned_cols=164 Identities=15% Similarity=0.014 Sum_probs=139.6
Q ss_pred CCCceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCeEEEEcCCCCcE-EEeCCC-CEEEEeCCC
Q 046361 74 MPKPEFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYEGVSYVSQIETPFFLLDLAKLRSI-EVDINN-KTAWVQAGA 151 (539)
Q Consensus 74 ~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~s~~~~~~~~~ivIdl~~l~~v-~vd~~~-~~v~v~aG~ 151 (539)
...|.++++|+|++||+++|++|+++++|+.++|+|||..+.+. . +++||+|+ |+++ .++.++ .+++|+||+
T Consensus 12 gg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~-~----~GvVI~l~-~~~i~~i~~~~~~~v~vgAG~ 85 (340)
T 1uxy_A 12 DHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED-Y----RGTVIINR-IKGIEIHDEPDAWYLHVGAGE 85 (340)
T ss_dssp CCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC-E----EEEEEEEC-CCCEEEEECSSEEEEEEETTS
T ss_pred CccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC-C----CeEEEEcc-CCCcEEEecCCCeEEEEecCC
Confidence 34799999999999999999999999999999999999875432 3 57999996 9998 466666 699999999
Q ss_pred CHHHHHHHHHhcCCceEeecCCCCcceeccccCCCccCCCcccccc-cccceeEEEEEcc-CCceecccCCCcchhhhhh
Q 046361 152 TIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGL-AADNVVDARIVDA-RGRILDREAMGEDLFWAIR 229 (539)
Q Consensus 152 ~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~~gg~g~~s~~~G~-~~d~v~~~~vV~~-~G~i~~~~~~~~dLf~a~r 229 (539)
+|.+|.+++.++|+ .|.+..+||+| ..||+..++.+.||. ++|+|+++++|++ +|++++.. +.|++|++|
T Consensus 86 ~~~~l~~~~~~~Gl-----~Gle~~~gIPG-tVGGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~--~~d~~~gYR 157 (340)
T 1uxy_A 86 NWHRLVKYTLQEGM-----PGLENLALIPG-CVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLT--AKECRFGYR 157 (340)
T ss_dssp BHHHHHHHHHHTTC-----CSCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGTCBTT
T ss_pred CHHHHHHHHHHCCC-----CccccccCCcc-chhHHHHhccccchhhHHhheeEEEEEECCCCcEEEEe--HHHhccccC
Confidence 99999999999984 45566677776 667888888899995 8999999999996 99998743 359999999
Q ss_pred cccC----CCceEEEEEEEEEEeeCC
Q 046361 230 GGGG----GSFGIILAWKVKLVPVPA 251 (539)
Q Consensus 230 G~~~----g~~Givt~~~~k~~p~~~ 251 (539)
++.. +++||||+++||+.|.++
T Consensus 158 ~s~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 158 DSIFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp BCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred cCccCCcCCCCEEEEEEEEEEEcCCC
Confidence 8752 259999999999999763
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.84 E-value=2.9e-21 Score=190.55 Aligned_cols=152 Identities=19% Similarity=0.184 Sum_probs=127.2
Q ss_pred CCceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCeEEEEcCCCCcEEEeCCCCEEEEeCCCCHH
Q 046361 75 PKPEFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYEGVSYVSQIETPFFLLDLAKLRSIEVDINNKTAWVQAGATIG 154 (539)
Q Consensus 75 ~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~s~~~~~~~~~ivIdl~~l~~v~vd~~~~~v~v~aG~~~~ 154 (539)
..|. +++|+|++||+++| ++|+.++|+|||..+.+.+. +++++|++++|++|++| + +|+||++|.
T Consensus 21 g~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d~~~---~~GvVI~l~~~~~I~vd---~--~v~aG~~~~ 85 (268)
T 2gqt_A 21 GPAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLDEGV---PERVIRLAGEFQTYDLK---G--WVGAGTLLP 85 (268)
T ss_dssp CEEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECTTCC---SSEEEEECGGGGCBCTT---S--EEETTSBHH
T ss_pred cceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecCCCc---CCeEEEEcCCCCCcEEc---C--EEECCCCHH
Confidence 3566 99999999999999 89999999999987654433 24899999999999865 2 999999999
Q ss_pred HHHHHHHhcCCceEeecCCCCcceeccccCCCccCCCccccc-ccccceeEEEEEccCCceecccCCCcchhhhhhcccC
Q 046361 155 ELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYG-LAADNVVDARIVDARGRILDREAMGEDLFWAIRGGGG 233 (539)
Q Consensus 155 ~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~~gg~g~~s~~~G-~~~d~v~~~~vV~~~G~i~~~~~~~~dLf~a~rG~~~ 233 (539)
+|.+++.++|+ .|.+..++|+| ..||+..++++.|| .++|+|+++++| +||++++... .|++|+||++..
T Consensus 86 ~l~~~~~~~Gl-----~Gle~~~giPG-tvGGav~~NaGayG~e~~d~v~~v~vv-~~G~v~~~~~--~~l~~~YR~s~~ 156 (268)
T 2gqt_A 86 LLVQEAARAGL-----SGLEGLLGIPA-QVGGAVKMNAGTRFGEMADALEAVEVF-HDGAFHVYCP--EELGFGYRKSHL 156 (268)
T ss_dssp HHHHHHHHTTE-----ESCGGGTTCCC-BHHHHHHTTCEETTEEGGGGEEEEEEE-ETTEEEEECG--GGSCCBTTBCCC
T ss_pred HHHHHHHHcCC-----cCCccccCccc-hhHHHHHhccccCchhHHhheeEEEEE-CCCcEEEEch--HHcccccCCCCc
Confidence 99999999973 36667777777 67888888889999 689999999999 9999997433 589999998762
Q ss_pred CCceEEEEEEEEEEeeC
Q 046361 234 GSFGIILAWKVKLVPVP 250 (539)
Q Consensus 234 g~~Givt~~~~k~~p~~ 250 (539)
..-||||+++||++|.+
T Consensus 157 ~~~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 157 PPGGIVTRVRLKLKERP 173 (268)
T ss_dssp STTCEEEEEEECCEECC
T ss_pred CCCceEEEEEEEEEeCC
Confidence 11259999999999974
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.77 E-value=4.7e-19 Score=169.87 Aligned_cols=116 Identities=20% Similarity=0.234 Sum_probs=99.3
Q ss_pred EEEeCCCCEEEEeCCCCHHHHHHHHHhcCCceEeec--CCCCcceeccccCCCccCCCcccccccccceeEEEEEccCCc
Q 046361 136 IEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAA--GLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIVDARGR 213 (539)
Q Consensus 136 v~vd~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~--g~~~~vgvgG~~~~gg~g~~s~~~G~~~d~v~~~~vV~~~G~ 213 (539)
+++|+++++|+||||+++.+|+++|.++|+ .+++ |+++. +|||++.+|++| .+||.. |+|++++||++||+
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl--~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~ 73 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTGL--FPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGR 73 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTTE--ECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSC
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcCC--EEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCC
Confidence 468999999999999999999999999974 4444 55555 999999999998 899999 99999999999999
Q ss_pred eec-cc-----CCCcchhhhhhcccCCCceEEEEEEEEEEeeCCeEEEEEEE
Q 046361 214 ILD-RE-----AMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVS 259 (539)
Q Consensus 214 i~~-~~-----~~~~dLf~a~rG~~~g~~Givt~~~~k~~p~~~~~~~~~~~ 259 (539)
+++ .. ..++||||+++|++ |+|||||+++||++|.|+....+.+.
T Consensus 74 i~~~~~~~~kn~~gydl~~~~~Gs~-G~lGIVt~~tlrl~p~~~~~~~~~~~ 124 (219)
T 2yvs_A 74 RVRAGGVVVKNVQGYDLVRLFVGSF-GLLGRAEEVVLRLRPGRAQAFLRRPF 124 (219)
T ss_dssp EEEEECSSCSSSSCSCHHHHHTTCT-TTTCEEEEEEEECEECSEEEEEEEEC
T ss_pred EEEECCccccCCCCcchHHHhccCC-CceEEEEEEEEEEEECCcccEEEEEe
Confidence 986 21 24589999999987 89999999999999998866555444
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.13 E-value=2.8e-06 Score=84.62 Aligned_cols=156 Identities=16% Similarity=0.113 Sum_probs=100.8
Q ss_pred CceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCeEEEEcCC---CCcEEEeCCCCEEEEeCCCC
Q 046361 76 KPEFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYEGVSYVSQIETPFFLLDLAK---LRSIEVDINNKTAWVQAGAT 152 (539)
Q Consensus 76 ~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~s~~~~~~~~~ivIdl~~---l~~v~vd~~~~~v~v~aG~~ 152 (539)
.|.-+++|+|.+|+.++++.. +.+..+.|||++..-. ........+++||+++ |+.|+++ ++.+++|||++
T Consensus 4 ~~~~~~~P~s~~ea~~ll~~~---~~~~~ilaGGT~ll~~-~~~~~~~~~~lIdl~~i~eL~~i~~~--~~~l~iGA~~t 77 (287)
T 1ffv_C 4 PRFEYHAPKSVGEAVALLGQL---GSDAKLLAGGHSLLPM-MKLRFAQPEHLIDINRIPELRGIREE--GSTVVIGAMTV 77 (287)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHH-HHTTSCCCSEEEECTTCGGGCCEEEE--TTEEEEETTCB
T ss_pred CcceEECCCCHHHHHHHHHhc---CCCCEEEECchHHHHH-HhcCCCCCCEEEECCCChhhcceEec--CCEEEEccCCc
Confidence 456789999999999998753 3578999999995421 0010012569999985 6777764 45799999999
Q ss_pred HHHHHHH-HHhcCC-ceEe--e-cCCC---CcceeccccCCCccCCCccccccccccee-------EEEEEccCCceecc
Q 046361 153 IGELYYR-ISEKSN-IHGF--A-AGLC---PSVGIGGHITGGGYGTMMRKYGLAADNVV-------DARIVDARGRILDR 217 (539)
Q Consensus 153 ~~~l~~~-l~~~g~-~l~~--~-~g~~---~~vgvgG~~~~gg~g~~s~~~G~~~d~v~-------~~~vV~~~G~i~~~ 217 (539)
+.+|.+. +.++++ ++.. . .+.. +..+|||.+.++.. .+|.+. .+++..++| ..+.
T Consensus 78 l~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~---------~~D~~~~l~Al~A~v~~~~~~G-~r~i 147 (287)
T 1ffv_C 78 ENDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP---------GNDHPALSIAVEAHFVLEGPNG-RRTV 147 (287)
T ss_dssp HHHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT---------TCSHHHHHHHTTCEEEEEETTE-EEEE
T ss_pred HHHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC---------cHHHHHHHHHcCcEEEEEcCCc-eEEE
Confidence 9999963 333332 2111 0 1222 13678898877632 345443 588899999 3333
Q ss_pred cCCCcchhhhhhcccCCCceEEEEEEEEEEee
Q 046361 218 EAMGEDLFWAIRGGGGGSFGIILAWKVKLVPV 249 (539)
Q Consensus 218 ~~~~~dLf~a~rG~~~g~~Givt~~~~k~~p~ 249 (539)
.. .|+|+.+|-..-..=-|||+++|...+.
T Consensus 148 ~~--~df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 148 PA--DGFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp ES--TTTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred EH--HHHhcCcccccCCCCCEEEEEEecCCCC
Confidence 22 3888877632211225999999987663
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.38 E-value=0.00029 Score=69.93 Aligned_cols=155 Identities=19% Similarity=0.113 Sum_probs=94.3
Q ss_pred CceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCC-ccccCCCCCeEEEEcCC---CCcEEEeCCCCEEEEeCCC
Q 046361 76 KPEFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYEGV-SYVSQIETPFFLLDLAK---LRSIEVDINNKTAWVQAGA 151 (539)
Q Consensus 76 ~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~-s~~~~~~~~~ivIdl~~---l~~v~vd~~~~~v~v~aG~ 151 (539)
.+.-+++|+|.+|+.++++.. +-+..+.+|||+..-. -... .....+||+++ |+.|+. +++.+++||++
T Consensus 4 ~~~~~~~P~sl~ea~~ll~~~---~~~a~~laGGT~l~~~~k~~~--~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~~ 76 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLTKL---GEDARPLAGGHSLIPIMKTRL--ATPEHLVDLRDIGDLVGIRE--EGTDVVIGAMT 76 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTS--CCCSEEEECTTCGGGSCEEE--ETTEEEEETTC
T ss_pred CceEEECcCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCC--CCCCEEEECCCChhhcceEe--cCCEEEEccCC
Confidence 456789999999999988643 3468889999995321 0010 12469999987 566665 45689999999
Q ss_pred CHHHHHH--HHHhcCCceEeecCCCC------cceeccccCCCccCCCccccccccccee-------EEEEEccCCceec
Q 046361 152 TIGELYY--RISEKSNIHGFAAGLCP------SVGIGGHITGGGYGTMMRKYGLAADNVV-------DARIVDARGRILD 216 (539)
Q Consensus 152 ~~~~l~~--~l~~~g~~l~~~~g~~~------~vgvgG~~~~gg~g~~s~~~G~~~d~v~-------~~~vV~~~G~i~~ 216 (539)
++.+|.+ .+.++-..+.-...... ..+|||.+..+. ..+|.+. .+++..++|+ .+
T Consensus 77 t~~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~-r~ 146 (288)
T 1n62_C 77 TQHALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGA-RI 146 (288)
T ss_dssp BHHHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEE-EE
T ss_pred cHHHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCcc-EE
Confidence 9999995 44432111110011111 347889887762 1355543 6677788884 22
Q ss_pred ccCCCcchhhhhhcccCCCceEEEEEEEEEEee
Q 046361 217 REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPV 249 (539)
Q Consensus 217 ~~~~~~dLf~a~rG~~~g~~Givt~~~~k~~p~ 249 (539)
..- .|+|..++-..-..=-|||++.|...+.
T Consensus 147 v~~--~df~~g~~~t~l~~~eil~~i~ip~~~~ 177 (288)
T 1n62_C 147 VAA--RDYYQGAYFTAIEPGELLTAIRIPVPPT 177 (288)
T ss_dssp EEH--HHHEEETTEESCCTTCEEEEEEEECCCT
T ss_pred EEH--HHHhcCcccccCCCCCEEEEEEeCCCCC
Confidence 211 2666555411111125899999976653
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=97.09 E-value=0.00026 Score=74.87 Aligned_cols=153 Identities=18% Similarity=0.113 Sum_probs=97.8
Q ss_pred EEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCeEEEEcCC---CCcEEEeCCCCEEEEeCCCCHHH
Q 046361 79 FIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYEGVSYVSQIETPFFLLDLAK---LRSIEVDINNKTAWVQAGATIGE 155 (539)
Q Consensus 79 ~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~s~~~~~~~~~ivIdl~~---l~~v~vd~~~~~v~v~aG~~~~~ 155 (539)
.+++|+|.+|+.++++... +..+.+||++..-.- ........++||+++ |+.|+.+ ++.+++|||+++.+
T Consensus 179 ~y~~P~sl~ea~~ll~~~~----~a~ilaGGT~L~~~~-k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vtl~~ 251 (462)
T 2w3s_A 179 PAFLPETSDALADWYLAHP----EATLIAGGTDVSLWV-TKALRDLPEVAFLSHCKDLAQIRET--PDGYGIGAGVTIAA 251 (462)
T ss_dssp CCBCCSSHHHHHHHHHHCT----TCEEESSCTTTTHHH-HTSCCCCCSEEECTTCGGGSCEEEE--TTEEEEETTCBHHH
T ss_pred EEEecCCHHHHHHHHhhCC----CCEEEeCCchhhhhh-hccCCCCCEEEEcCCChhhCcEEEc--CCEEEEccCCcHHH
Confidence 4678999999999886532 578889999975321 010112468999988 6778765 45799999999999
Q ss_pred HHHHHHhcCCc-e----EeecC--CCCcceeccccCCCccCCCccccccccccee----EEEEEccCCceecccCCCcch
Q 046361 156 LYYRISEKSNI-H----GFAAG--LCPSVGIGGHITGGGYGTMMRKYGLAADNVV----DARIVDARGRILDREAMGEDL 224 (539)
Q Consensus 156 l~~~l~~~g~~-l----~~~~g--~~~~vgvgG~~~~gg~g~~s~~~G~~~d~v~----~~~vV~~~G~i~~~~~~~~dL 224 (539)
|.+.+. +.+. | ....+ .-+..+|||.+..+.++ +....-++ .+++..++|+ .+..- .|+
T Consensus 252 l~~~l~-~~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp~------sD~~~~L~ALdA~v~l~~~~G~-R~vp~--~dF 321 (462)
T 2w3s_A 252 LRAFAE-GPHPALAGLLRRFASEQVRQVATIGGNIANGSPI------GDGPPALIAMGASLTLRRGQER-RRMPL--EDF 321 (462)
T ss_dssp HHHHHT-TTCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCTT------CSHHHHHHHTTCEEEEEBTTBC-CCCBG--GGG
T ss_pred HHHHHH-HHhHHHHHHHHHhCChhheeeEEcccccccCCCc------chHHHHHHHcCCEEEEEeCCce-EEEEH--HHh
Confidence 998743 3321 1 00111 11235789988876532 44555566 7888888883 33222 377
Q ss_pred hhhhhcccCCCceEEEEEEEEEEe
Q 046361 225 FWAIRGGGGGSFGIILAWKVKLVP 248 (539)
Q Consensus 225 f~a~rG~~~g~~Givt~~~~k~~p 248 (539)
|..+|-..-..=-||++++|...+
T Consensus 322 ~~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 322 FLEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp EEETTEESCCTTCEEEEEEEESCC
T ss_pred hcccccccCCCCcEEEEEEEecCC
Confidence 777652211112499999997655
No 32
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=93.67 E-value=0.081 Score=52.16 Aligned_cols=154 Identities=13% Similarity=0.019 Sum_probs=89.3
Q ss_pred CceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCeEEEEcCCC---CcEEEeCCCCEEEEeCCCC
Q 046361 76 KPEFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYEGVSYVSQIETPFFLLDLAKL---RSIEVDINNKTAWVQAGAT 152 (539)
Q Consensus 76 ~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~s~~~~~~~~~ivIdl~~l---~~v~vd~~~~~v~v~aG~~ 152 (539)
.|.-+++|+|.+|+.++++. +-...+.+|||+....-. ........+||++++ +.|+. +++.+++||+++
T Consensus 4 ~~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k-~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt 76 (288)
T 1t3q_C 4 PAFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLA-FRLVYPSCLVDLRNVSELFEISQ--SAGILSVGAMVT 76 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHH-TTCCCCSEEEECTTCGGGGCEEE--ETTEEEEETTCB
T ss_pred CCceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHh-cCCCCCCEEEECCCChhhcCeEE--cCCEEEEcCCCc
Confidence 45678999999999988863 234677899999431100 000123589999985 55655 456899999999
Q ss_pred HHHHHH--HHHhcCCceEeecCCC------CcceeccccCCCccCCCccccccccccee-------EEEEEccCCceecc
Q 046361 153 IGELYY--RISEKSNIHGFAAGLC------PSVGIGGHITGGGYGTMMRKYGLAADNVV-------DARIVDARGRILDR 217 (539)
Q Consensus 153 ~~~l~~--~l~~~g~~l~~~~g~~------~~vgvgG~~~~gg~g~~s~~~G~~~d~v~-------~~~vV~~~G~i~~~ 217 (539)
+.+|.+ .+.++-..+.-..... +..++||.+..+- ..+|... .+++..++|+...
T Consensus 77 ~~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~---------p~sD~~~~L~Al~A~v~l~~~~g~R~v- 146 (288)
T 1t3q_C 77 HFRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHAD---------AGAEMPFLMATLGATMYIASSAGVRSV- 146 (288)
T ss_dssp HHHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTC---------TTCHHHHHHHHTTCEEEEEETTEEEEE-
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCC---------CcHHHHHHHHHcCcEEEEEcCCceEEE-
Confidence 999986 3433211111001111 2347888776442 1356554 6777778885321
Q ss_pred cCCCcchhhhhhcccCCCceEEEEEEEEEEe
Q 046361 218 EAMGEDLFWAIRGGGGGSFGIILAWKVKLVP 248 (539)
Q Consensus 218 ~~~~~dLf~a~rG~~~g~~Givt~~~~k~~p 248 (539)
.- .|+|...+--.-..=-|||++.|...+
T Consensus 147 p~--~dF~~g~~~t~L~~~Eil~~I~iP~~~ 175 (288)
T 1t3q_C 147 SA--TDFMKGHYFTDLEAGEVLVRVEIPIPA 175 (288)
T ss_dssp EH--HHHEEETTEESCCTTCEEEEEEEECCS
T ss_pred EH--HHHhcCcccccCCCCCEEEEEEecCCC
Confidence 11 255544321000112489999986543
No 33
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=93.67 E-value=0.095 Score=52.11 Aligned_cols=158 Identities=11% Similarity=-0.034 Sum_probs=89.9
Q ss_pred CceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCeEEEEcCCCC---cEEEeCCCCEEEEeCCCC
Q 046361 76 KPEFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYEGVSYVSQIETPFFLLDLAKLR---SIEVDINNKTAWVQAGAT 152 (539)
Q Consensus 76 ~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~s~~~~~~~~~ivIdl~~l~---~v~vd~~~~~v~v~aG~~ 152 (539)
.+..+++|+|.+|+.++++.. . ...+.+||++....-. .+......+||++++. .|+. +++.+++||+++
T Consensus 9 ~~~~y~~P~sl~ea~~ll~~~---~-~a~~laGGT~l~~~~k-~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt 81 (305)
T 3nvz_B 9 ERVTWIQASTLKELLDLKAQH---P-EAKLVVGNTEIGIEMK-FKNQLFPMIICPAWIPELNAVEH--GPEGISFGAACA 81 (305)
T ss_dssp SSCEEEECCSHHHHHHHHHHC---T-TCEECSSCTTHHHHHH-HSCCCCSEEEECTTCGGGGCEEE--CSSEEEEETTCB
T ss_pred CCeEEEccCCHHHHHHHHHhC---C-CCEEEECccHHHHHHh-cCCCCCCEEEECCCChhhcceEE--CCCeEEEccCCc
Confidence 567789999999998877542 1 3577899999642110 0001245899999754 5554 456899999999
Q ss_pred HHHHHHHHHhc-------C---C-ceEeecCCC------CcceeccccCCCccCCCccccccccccee----EEEEEccC
Q 046361 153 IGELYYRISEK-------S---N-IHGFAAGLC------PSVGIGGHITGGGYGTMMRKYGLAADNVV----DARIVDAR 211 (539)
Q Consensus 153 ~~~l~~~l~~~-------g---~-~l~~~~g~~------~~vgvgG~~~~gg~g~~s~~~G~~~d~v~----~~~vV~~~ 211 (539)
+.++.+.+.++ . . .+.-..... +..+|||.+..+... +...--++ .+++..++
T Consensus 82 ~~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p~------sD~~~~L~AldA~v~l~~~~ 155 (305)
T 3nvz_B 82 LSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPI------SDLNPVFMASGTKLTIVSRG 155 (305)
T ss_dssp HHHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCTT------CSSHHHHHHHTCEEEEEETT
T ss_pred HHHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCCc------hHHHHHHHHcCCEEEEEcCC
Confidence 99999876532 0 0 000000111 245788887765421 11222222 56777788
Q ss_pred CceecccCCCcchhhhhhcccCCCceEEEEEEEEEEe
Q 046361 212 GRILDREAMGEDLFWAIRGGGGGSFGIILAWKVKLVP 248 (539)
Q Consensus 212 G~i~~~~~~~~dLf~a~rG~~~g~~Givt~~~~k~~p 248 (539)
|+.... - ..|+|-+++--.-..=-|||++.+...+
T Consensus 156 G~R~vp-~-~~df~~g~~~t~l~~~Eil~~I~iP~~~ 190 (305)
T 3nvz_B 156 TRRTVP-M-DHTFFPSYRKTLLGPEEILLSIEIPYSR 190 (305)
T ss_dssp EEEEEE-C-CGGGCCSTTCCSCCTTCEEEEEEEECCC
T ss_pred CcEEEE-e-ehHhhcCcccccCCCCcEEEEEEecCCC
Confidence 852221 1 1155544431110111399999986543
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=92.86 E-value=0.18 Score=49.95 Aligned_cols=78 Identities=18% Similarity=0.187 Sum_probs=52.7
Q ss_pred ceEEEecCCHHHHHHHHHHHHhcCC-eEEEEeCCCCCCCCccccCCCCCeEEEEcCCCCcE-EEeCCCCEEEEeCCCCHH
Q 046361 77 PEFIFTPLTESHLQAAVICSRHLRI-HLRARSGGHDYEGVSYVSQIETPFFLLDLAKLRSI-EVDINNKTAWVQAGATIG 154 (539)
Q Consensus 77 p~~vv~P~s~~dv~~~v~~a~~~~~-~v~v~ggGh~~~g~s~~~~~~~~~ivIdl~~l~~v-~vd~~~~~v~v~aG~~~~ 154 (539)
|.-+++|+|.+|+.++++. ++- ...+.+||++....- .........+||++++..+ .|..+++.+++||++++.
T Consensus 3 ~f~y~~P~sl~ea~~ll~~---~~~~~a~~laGGT~l~~~~-k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~ 78 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLHQ---YKDVPPAIIAGGTDLVIEI-NDRWEKPDVVIDIKKLKELEYIRVEENTIHIGALSTFT 78 (296)
T ss_dssp CCEEECCSSHHHHHHHHHH---TTTSCCEEESSCTTHHHHH-HTTSCCCSEEEECTTCGGGCCEEECSSEEEEETTCBHH
T ss_pred ceeEeCCCCHHHHHHHHHh---CCCCCeEEEECCcHHHHHh-hcCCCCCCeEEEcccChhhcceEEcCCeEEEccCCcHH
Confidence 4567899999998877643 332 467789999964210 0000124589999986543 233356799999999999
Q ss_pred HHHH
Q 046361 155 ELYY 158 (539)
Q Consensus 155 ~l~~ 158 (539)
++.+
T Consensus 79 ~l~~ 82 (296)
T 3hrd_C 79 QIEN 82 (296)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9974
No 35
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=91.88 E-value=0.12 Score=53.84 Aligned_cols=28 Identities=14% Similarity=0.248 Sum_probs=23.1
Q ss_pred hhHHhhhhhcHHHHHHHHhhcCCCCCCccC
Q 046361 494 TWGVKYFKENFNRLVRVKINVDPGNLFRHE 523 (539)
Q Consensus 494 ~~~~~yyg~n~~RL~~IK~kyDP~~vF~~~ 523 (539)
...+.| + +++++++||++|||+|+|++.
T Consensus 387 ~~~~~Y-p-~~~~f~~vk~~~DP~g~f~n~ 414 (422)
T 2vfr_A 387 ELRALY-P-RLADFGALAGALDPAGKFTNA 414 (422)
T ss_dssp HHHTTC-T-THHHHHHHHHHHCTTCTTCCH
T ss_pred HHHHHC-c-CHHHHHHHHHHhCCCCccCCH
Confidence 344444 5 899999999999999999875
No 36
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=88.95 E-value=0.64 Score=46.44 Aligned_cols=77 Identities=18% Similarity=0.122 Sum_probs=52.9
Q ss_pred CceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCeEEEEcCCC---CcEEEeCCCCEEEEeCCCC
Q 046361 76 KPEFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYEGVSYVSQIETPFFLLDLAKL---RSIEVDINNKTAWVQAGAT 152 (539)
Q Consensus 76 ~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~s~~~~~~~~~ivIdl~~l---~~v~vd~~~~~v~v~aG~~ 152 (539)
.|--+++|+|.+|+.++++ + -.-.+.+||++....- .........+||++++ +.|+.++ ++.+++||+++
T Consensus 5 ~~f~y~~P~sl~ea~~ll~---~--~~a~~lAGGT~l~~~~-k~~~~~p~~lIdi~~i~eL~~I~~~~-~~~l~IGA~vt 77 (324)
T 1rm6_B 5 TDFRTHRPATLADAVNALA---A--EATLPLGAGTDLLPNL-RRGLGHPAALVDLTGIDGLATISTLA-DGSLRIGAGAT 77 (324)
T ss_dssp CCCEEECCSSHHHHHHHTT---S--TTEEEESSCTTHHHHH-HTTSCCCSEEEECTTSTTTTCEEECT-TSCEEEETTCB
T ss_pred CceEEEccCCHHHHHHHHh---C--CCCEEEECchhHHHHH-hccCCCCCEEEECCCChhhcceEECC-CCeEEEccCCc
Confidence 3456899999999988875 2 2467889999863110 0000124689999876 5566543 34699999999
Q ss_pred HHHHHHH
Q 046361 153 IGELYYR 159 (539)
Q Consensus 153 ~~~l~~~ 159 (539)
+.+|.+.
T Consensus 78 ~~~l~~~ 84 (324)
T 1rm6_B 78 LEAIAEH 84 (324)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9998864
No 37
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=85.07 E-value=1.1 Score=47.74 Aligned_cols=28 Identities=18% Similarity=0.166 Sum_probs=22.6
Q ss_pred hhHHhhhhhc-HHHHHHHHhhcCCCCCCc
Q 046361 494 TWGVKYFKEN-FNRLVRVKINVDPGNLFR 521 (539)
Q Consensus 494 ~~~~~yyg~n-~~RL~~IK~kyDP~~vF~ 521 (539)
+|...+||++ ++-+++||+.+||+|+|+
T Consensus 480 ~~~~~~~g~~~~~lmr~IK~a~DP~~IlN 508 (520)
T 1wvf_A 480 DRVAQSYGPVKRKLEHAIKRAVDPNNILA 508 (520)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCTTCCBC
T ss_pred hhhhhhcCHHHHHHHHHHHHHcCCCCCCC
Confidence 3557888876 555599999999999995
No 38
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=74.08 E-value=4.1 Score=48.33 Aligned_cols=79 Identities=8% Similarity=-0.079 Sum_probs=54.0
Q ss_pred CceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCeEEEEcCCCC---cEEEeCCCCEEEEeCCCC
Q 046361 76 KPEFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYEGVSYVSQIETPFFLLDLAKLR---SIEVDINNKTAWVQAGAT 152 (539)
Q Consensus 76 ~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~s~~~~~~~~~ivIdl~~l~---~v~vd~~~~~v~v~aG~~ 152 (539)
.+..+++|+|.+|+.++++.. -.-.+.+||++..-.-... ......+||++++. .|+. +++.+++||+++
T Consensus 232 ~~~~~~~P~sl~ea~~ll~~~----~~a~lvaGgT~l~~~~k~~-~~~~~~lIdl~~i~EL~~I~~--~~~~l~IGA~vt 304 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKAQH----PEAKLVVGNTEIGIEMKFK-NQLFPMIICPAWIPELNAVEH--GPEGISFGAACA 304 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHHHC----TTCEECSSCTTHHHHHHHS-CCCCSEEEECTTCGGGGCEEE--CSSEEEEETTCB
T ss_pred CceEEEccCCHHHHHHHHhhC----CCCEEEEeCcHHHHHhhcC-CCCCCeEEEcCCCHHhCceEE--eCCEEEEEecCh
Confidence 456789999999998877542 1246778998853111000 01235799999855 4554 456899999999
Q ss_pred HHHHHHHHH
Q 046361 153 IGELYYRIS 161 (539)
Q Consensus 153 ~~~l~~~l~ 161 (539)
+.+|.+.+.
T Consensus 305 l~~l~~~l~ 313 (1332)
T 3unc_A 305 LSSVEKTLL 313 (1332)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998764
No 39
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=72.56 E-value=1.7 Score=47.70 Aligned_cols=28 Identities=36% Similarity=0.572 Sum_probs=23.4
Q ss_pred hhHHhhhhh-cHHHHHHHHhhcCCCCCCc
Q 046361 494 TWGVKYFKE-NFNRLVRVKINVDPGNLFR 521 (539)
Q Consensus 494 ~~~~~yyg~-n~~RL~~IK~kyDP~~vF~ 521 (539)
.|-..+||+ .++.|++||+.+||+|+|+
T Consensus 625 ~~l~~~~g~~~l~lmr~IK~a~DP~gILN 653 (658)
T 4bby_A 625 QWLKESISDVGFGMLKSVKDYVDPTNIFG 653 (658)
T ss_dssp GGHHHHHCHHHHHHHHHHHHHHSTTCSSC
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCC
Confidence 466666764 6999999999999999995
No 40
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=53.32 E-value=16 Score=38.26 Aligned_cols=28 Identities=11% Similarity=0.108 Sum_probs=23.6
Q ss_pred hhHHhhhh-hcHHHHHHHHhhcCCCCCCc
Q 046361 494 TWGVKYFK-ENFNRLVRVKINVDPGNLFR 521 (539)
Q Consensus 494 ~~~~~yyg-~n~~RL~~IK~kyDP~~vF~ 521 (539)
.|-...|| +.++-+++||+.+||+|+++
T Consensus 443 ~~l~~~~~~~~~~~m~~iK~~~DP~~ilN 471 (476)
T 3pm9_A 443 DELAEVKDKTAIELMRSIKALLDPHGIMN 471 (476)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHCTTSCBS
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCC
Confidence 46666776 47999999999999999984
No 41
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=49.59 E-value=7 Score=41.94 Aligned_cols=23 Identities=22% Similarity=0.345 Sum_probs=21.1
Q ss_pred hcHHHHHHHHhhcCCCCCCccCC
Q 046361 502 ENFNRLVRVKINVDPGNLFRHEQ 524 (539)
Q Consensus 502 ~n~~RL~~IK~kyDP~~vF~~~q 524 (539)
+++++-+++|+++||+++|.++.
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~~ 555 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNGF 555 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCHH
T ss_pred CCHHHHHHHHHhcCCCCccCCHH
Confidence 89999999999999999998753
No 42
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=47.98 E-value=25 Score=37.55 Aligned_cols=21 Identities=19% Similarity=0.158 Sum_probs=18.1
Q ss_pred hcHHHHHHHHhhcCCCCCCcc
Q 046361 502 ENFNRLVRVKINVDPGNLFRH 522 (539)
Q Consensus 502 ~n~~RL~~IK~kyDP~~vF~~ 522 (539)
..++-+++||+.+||+|+|.-
T Consensus 523 ~~~~lm~~iK~~~DP~gILNP 543 (560)
T 1e8g_A 523 SFLRFNEVLKNAVDPNGIIAP 543 (560)
T ss_dssp HHHHHHHHHHHHHCTTCCBCT
T ss_pred HHHHHHHHHHHHcCccCCCCC
Confidence 368889999999999999953
No 43
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=41.26 E-value=10 Score=40.39 Aligned_cols=23 Identities=22% Similarity=0.286 Sum_probs=21.2
Q ss_pred hhcHHHHHHHHhhcCCCCCCccC
Q 046361 501 KENFNRLVRVKINVDPGNLFRHE 523 (539)
Q Consensus 501 g~n~~RL~~IK~kyDP~~vF~~~ 523 (539)
|+|+..-+++++++||+++|.++
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 58999999999999999999874
No 44
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=35.15 E-value=49 Score=27.73 Aligned_cols=37 Identities=8% Similarity=0.052 Sum_probs=32.1
Q ss_pred CCceEEEecCCHHHHHHHHHHHHhcCCeE-EEEeCCCC
Q 046361 75 PKPEFIFTPLTESHLQAAVICSRHLRIHL-RARSGGHD 111 (539)
Q Consensus 75 ~~p~~vv~P~s~~dv~~~v~~a~~~~~~v-~v~ggGh~ 111 (539)
..+..|+.+.+++|+.++.+.|++.|+|. .|+-.|+.
T Consensus 47 G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 47 GQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp CSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred CCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 48999999999999999999999999986 55666664
No 45
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=33.49 E-value=67 Score=26.74 Aligned_cols=37 Identities=14% Similarity=0.079 Sum_probs=32.1
Q ss_pred CCCceEEEecCCHHHHHHHHHHHHhcCCeE-EEEeCCC
Q 046361 74 MPKPEFIFTPLTESHLQAAVICSRHLRIHL-RARSGGH 110 (539)
Q Consensus 74 ~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v-~v~ggGh 110 (539)
...|..|+++.+++|+.++.+.|.+.|+|. .++=.|+
T Consensus 53 ~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~ 90 (121)
T 1wn2_A 53 EGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGL 90 (121)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCc
Confidence 358999999999999999999999999986 5566666
No 46
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=33.05 E-value=70 Score=26.54 Aligned_cols=41 Identities=10% Similarity=0.199 Sum_probs=33.9
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCeE-EEEeCCC
Q 046361 68 RYLVPSMPKPEFIFTPLTESHLQAAVICSRHLRIHL-RARSGGH 110 (539)
Q Consensus 68 r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v-~v~ggGh 110 (539)
+|.. ...|..|+.+.+++|+.++.+.|.+.|++. .++=.|+
T Consensus 48 ~W~~--~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~ 89 (120)
T 1xty_A 48 EWLH--QGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGK 89 (120)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCc
Confidence 4643 358999999999999999999999999986 5566665
No 47
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=31.69 E-value=67 Score=26.45 Aligned_cols=37 Identities=16% Similarity=0.129 Sum_probs=30.8
Q ss_pred CCCceEEEecCCHHHHHHHHHHHHhcCCeE-EEEeCCC
Q 046361 74 MPKPEFIFTPLTESHLQAAVICSRHLRIHL-RARSGGH 110 (539)
Q Consensus 74 ~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v-~v~ggGh 110 (539)
...|..|+.+.+++|+.++.+.|.+.|+|. .++-.|+
T Consensus 47 ~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 84 (115)
T 2zv3_A 47 EGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGH 84 (115)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC-
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 458999999999999999999999999986 4555554
No 48
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=31.67 E-value=22 Score=38.17 Aligned_cols=22 Identities=23% Similarity=0.173 Sum_probs=17.3
Q ss_pred hhcHHHHHHHHhhcCCCCCCccC
Q 046361 501 KENFNRLVRVKINVDPGNLFRHE 523 (539)
Q Consensus 501 g~n~~RL~~IK~kyDP~~vF~~~ 523 (539)
++... |++||+.+||.|+|+--
T Consensus 536 ~~~~~-m~~iK~~~DP~~ilNPG 557 (571)
T 1f0x_A 536 KAPET-LQKFYRENDPTNSMNPG 557 (571)
T ss_dssp CCCHH-HHHHHHHHCTTCCBSTT
T ss_pred CCHHH-HHHHHHHhCCCCCCCCC
Confidence 44444 99999999999999533
No 49
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=31.65 E-value=26 Score=41.71 Aligned_cols=80 Identities=11% Similarity=0.018 Sum_probs=50.8
Q ss_pred eEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCeEEEEcCCCCcE-EEeCCCCEEEEeCCCCHHHH
Q 046361 78 EFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYEGVSYVSQIETPFFLLDLAKLRSI-EVDINNKTAWVQAGATIGEL 156 (539)
Q Consensus 78 ~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~s~~~~~~~~~ivIdl~~l~~v-~vd~~~~~v~v~aG~~~~~l 156 (539)
...++|.|.+|+.++...-. +-++ ..|++...-. .......-.++||+.+...+ .+..++..+++||++++.++
T Consensus 241 ~~w~~P~tl~el~~l~~~~p--~a~l--vaGnT~~gl~-~~~~~~~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~ 315 (1335)
T 3zyv_A 241 TTWIAPGTLNDLLELKMKHP--SAPL--VIGNTYLGLH-MKFTDVSYPIIISPARILELFVVTNTKQGLTLGTGLSLTQV 315 (1335)
T ss_dssp CEEEECSSHHHHHHHHHHCT--TSCB--CSSCTTHHHH-HC--CCCCSEEECCTTCGGGSCEECCTTEEEEETTCBHHHH
T ss_pred ceEecCCCHHHHHHHHHHCC--CCeE--EEecccceee-EeecCCCCCeEEEcCcchhHheEEecCCEEEEcccCcHHHH
Confidence 35789999999988754321 2333 4566553200 00000113589999876554 45556678999999999999
Q ss_pred HHHHHh
Q 046361 157 YYRISE 162 (539)
Q Consensus 157 ~~~l~~ 162 (539)
.+.|.+
T Consensus 316 ~~~l~~ 321 (1335)
T 3zyv_A 316 KNVLSD 321 (1335)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887764
No 50
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=31.25 E-value=68 Score=26.48 Aligned_cols=38 Identities=5% Similarity=-0.030 Sum_probs=32.3
Q ss_pred CCCceEEEecCCHHHHHHHHHHHHhcCCeE-EEEeCCCC
Q 046361 74 MPKPEFIFTPLTESHLQAAVICSRHLRIHL-RARSGGHD 111 (539)
Q Consensus 74 ~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v-~v~ggGh~ 111 (539)
...|..|+.+.+++++.++.+.|.+.|+|. .++-.|+.
T Consensus 49 ~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 49 EGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 458999999999999999999999999986 55556653
No 51
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=28.60 E-value=22 Score=38.21 Aligned_cols=27 Identities=22% Similarity=0.470 Sum_probs=18.0
Q ss_pred hHHhhhhh-cHHHHHHHHhhcCCCCCCc
Q 046361 495 WGVKYFKE-NFNRLVRVKINVDPGNLFR 521 (539)
Q Consensus 495 ~~~~yyg~-n~~RL~~IK~kyDP~~vF~ 521 (539)
|-...||+ .++=+++||+.+||+|+|+
T Consensus 552 ~l~~~~g~~~~~lmr~iK~a~DP~gIlN 579 (584)
T 2uuu_A 552 WMTRYATRGWINVYRSLKETIDPKDICN 579 (584)
T ss_dssp -------CTHHHHHHHHHHHHCTTCCBS
T ss_pred HHHHhcCHHHHHHHHHHHHHcCCCcCCC
Confidence 44455554 6899999999999999984
No 52
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=25.47 E-value=73 Score=24.35 Aligned_cols=35 Identities=11% Similarity=0.115 Sum_probs=30.1
Q ss_pred eEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCC
Q 046361 78 EFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDY 112 (539)
Q Consensus 78 ~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~ 112 (539)
.++-...+.+|+..+++-..++|.|+++.-.|.+-
T Consensus 29 ryirtatssqdirdiiksmkdngkplvvfvngasq 63 (112)
T 2lnd_A 29 RYIRTATSSQDIRDIIKSMKDNGKPLVVFVNGASQ 63 (112)
T ss_dssp TTEEEECSHHHHHHHHHHHTTCCSCEEEEECSCCH
T ss_pred ceeeeccchhhHHHHHHHHHhcCCeEEEEecCccc
Confidence 34667889999999999999999999999888653
No 53
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=25.20 E-value=1.2e+02 Score=24.88 Aligned_cols=36 Identities=17% Similarity=0.308 Sum_probs=30.9
Q ss_pred CCceEEEecCCHHHHHHHHHHHHhcCCeE-EEEeCCC
Q 046361 75 PKPEFIFTPLTESHLQAAVICSRHLRIHL-RARSGGH 110 (539)
Q Consensus 75 ~~p~~vv~P~s~~dv~~~v~~a~~~~~~v-~v~ggGh 110 (539)
..|..+++..+++++.++.+.|.+.|+|. .++=.|+
T Consensus 50 g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 86 (117)
T 1q7s_A 50 GQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGR 86 (117)
T ss_dssp TCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred CCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 46999999999999999999999999985 5555665
No 54
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=21.15 E-value=1.5e+02 Score=25.71 Aligned_cols=39 Identities=10% Similarity=0.092 Sum_probs=32.9
Q ss_pred ceEEEecCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCC
Q 046361 77 PEFIFTPLTESHLQAAVICSRHLRIHLRARSGGHDYEGV 115 (539)
Q Consensus 77 p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~ 115 (539)
-...+.|.+.+++.++++.+.+.+..+.+-.||.+....
T Consensus 46 ~~~~iv~Dd~~~I~~~l~~a~~~~~DlVittGG~g~~~~ 84 (167)
T 2g2c_A 46 ISEVVVPEGYDTVVEAIATALKQGARFIITAGGTGIRAK 84 (167)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHTTCSEEEEESCCSSSTT
T ss_pred eEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence 356788999999999999988766889999999987643
Done!