BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>046364
MGDVEALYSVFVEDPHVLERMDGVAFADTPLLVAAGCRCWEHPFCDGNGKLKALAGLEAK
SSLAQPHARGFVGGIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRNSRVHWKYHINRA
ISK

High Scoring Gene Products

Symbol, full name Information P value
AT4G11000 protein from Arabidopsis thaliana 8.3e-13
AT5G15500 protein from Arabidopsis thaliana 3.0e-08
AT1G14480 protein from Arabidopsis thaliana 1.5e-05
AT4G10720 protein from Arabidopsis thaliana 0.00014

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046364
        (123 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2123406 - symbol:AT4G11000 "AT4G11000" species...   176  8.3e-13   1
TAIR|locus:2180882 - symbol:AT5G15500 species:3702 "Arabi...    90  3.0e-08   2
TAIR|locus:2012532 - symbol:AT1G14480 "AT1G14480" species...    86  1.5e-05   2
TAIR|locus:2132711 - symbol:AT4G10720 "AT4G10720" species...    77  0.00014   2


>TAIR|locus:2123406 [details] [associations]
            symbol:AT4G11000 "AT4G11000" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR002110 Pfam:PF00023
            SMART:SM00248 EMBL:CP002687 Gene3D:1.25.40.20 InterPro:IPR020683
            Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:AL161518
            EMBL:AL049525 InterPro:IPR026961 Pfam:PF13962 IPI:IPI00525166
            PIR:T04295 RefSeq:NP_192838.1 UniGene:At.54268
            ProteinModelPortal:Q9SN54 SMR:Q9SN54 STRING:Q9SN54 PRIDE:Q9SN54
            EnsemblPlants:AT4G11000.1 GeneID:826701 KEGG:ath:AT4G11000
            TAIR:At4g11000 InParanoid:Q9SN54 OMA:ISIICIM PhylomeDB:Q9SN54
            ArrayExpress:Q9SN54 Genevestigator:Q9SN54 Uniprot:Q9SN54
        Length = 406

 Score = 176 (67.0 bits), Expect = 8.3e-13, P = 8.3e-13
 Identities = 39/106 (36%), Positives = 58/106 (54%)

Query:     1 MGDVEALYSVFVEDPHVLERMDGVAFADTPLLVAAGCRCWEHPFCDGNGKLKALAGLEAK 60
             +GD+E LY +  EDP++L+  D V+F +TPL +AA  +   H F      LK    L+  
Sbjct:    48 VGDIERLYELIAEDPNILDHFDKVSFCETPLHIAAE-KGQTH-FAMELMTLKPSLALKLN 105

Query:    61 SSLAQPHARGFVGGIAIDVLFGWLRLSNKEQILKWKDDDGNTALHM 106
              S   P            VL GW++ +N+++IL WKD+DGNT  H+
Sbjct:   106 VSGFSPLHLALQNNHIQTVLLGWIKRANRKEILDWKDEDGNTVFHI 151


>TAIR|locus:2180882 [details] [associations]
            symbol:AT5G15500 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR002110
            PROSITE:PS50088 SMART:SM00248 EMBL:CP002688 Gene3D:1.25.40.20
            InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
            HSSP:P42773 EMBL:AL391143 InterPro:IPR026961 Pfam:PF13962
            HOGENOM:HOG000131606 EMBL:BT005379 EMBL:AK118435 IPI:IPI00539006
            PIR:T51528 RefSeq:NP_197054.1 UniGene:At.31790
            ProteinModelPortal:Q9LF32 SMR:Q9LF32 PRIDE:Q9LF32
            EnsemblPlants:AT5G15500.2 GeneID:831403 KEGG:ath:AT5G15500
            TAIR:At5g15500 InParanoid:Q9LF32 OMA:WISEERR PhylomeDB:Q9LF32
            ProtClustDB:CLSN2687470 Genevestigator:Q9LF32 Uniprot:Q9LF32
        Length = 457

 Score = 90 (36.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
 Identities = 17/34 (50%), Positives = 25/34 (73%)

Query:     2 GDVEALYSVFVEDPHVLERMDGVAFADTPLLVAA 35
             G+++ LY +  EDP+VL++ D V F +TPL VAA
Sbjct:    13 GNIDLLYELIHEDPYVLDKTDHVPFVNTPLHVAA 46

 Score = 67 (28.6 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
 Identities = 21/58 (36%), Positives = 30/58 (51%)

Query:    74 GIAI-DVLFGW-LRLSNKE------QILKWKDDDGNTALHMRNSRVHWKYHINRAISK 123
             G+++  VL GW LRL  K+      +++  +D DGNT LH+        Y INR   K
Sbjct:   156 GLSVLKVLMGWILRLCQKDAEWIETRVINRRDKDGNTPLHLA------AYEINRQAMK 207


>TAIR|locus:2012532 [details] [associations]
            symbol:AT1G14480 "AT1G14480" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR002110 SMART:SM00248
            EMBL:CP002684 GenomeReviews:CT485782_GR Gene3D:1.25.40.20
            InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
            EMBL:AC012188 InterPro:IPR026961 Pfam:PF13962 eggNOG:KOG0504
            HOGENOM:HOG000131606 ProtClustDB:CLSN2682954 IPI:IPI00523168
            PIR:F86279 RefSeq:NP_172900.2 UniGene:At.41970
            ProteinModelPortal:Q9M9R5 SMR:Q9M9R5 STRING:Q9M9R5
            EnsemblPlants:AT1G14480.1 GeneID:838010 KEGG:ath:AT1G14480
            TAIR:At1g14480 InParanoid:Q9M9R5 PhylomeDB:Q9M9R5
            Genevestigator:Q9M9R5 Uniprot:Q9M9R5
        Length = 441

 Score = 86 (35.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
 Identities = 16/34 (47%), Positives = 23/34 (67%)

Query:     2 GDVEALYSVFVEDPHVLERMDGVAFADTPLLVAA 35
             G +  LY++  E+P++LE +D V F  TPL VAA
Sbjct:    12 GSINELYALIDENPYILENIDAVPFVSTPLHVAA 45

 Score = 59 (25.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
 Identities = 15/37 (40%), Positives = 23/37 (62%)

Query:    77 IDVLFGWL-RLSNKE------QILKWKDDDGNTALHM 106
             + VL GW+ R+S K+      ++L  +D D NTALH+
Sbjct:   155 LQVLTGWIQRMSQKDAYYIENRVLNKRDFDFNTALHL 191


>TAIR|locus:2132711 [details] [associations]
            symbol:AT4G10720 "AT4G10720" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR002110
            PROSITE:PS50088 SMART:SM00248 EMBL:CP002687 Gene3D:1.25.40.20
            InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
            InterPro:IPR026961 Pfam:PF13962 UniGene:At.43811 UniGene:At.63690
            EMBL:BT023459 IPI:IPI00543649 RefSeq:NP_192810.2
            ProteinModelPortal:Q4V397 SMR:Q4V397 EnsemblPlants:AT4G10720.1
            GeneID:826666 KEGG:ath:AT4G10720 TAIR:At4g10720
            HOGENOM:HOG000131606 InParanoid:Q4V397 OMA:HHANSNI PhylomeDB:Q4V397
            ProtClustDB:CLSN2680954 Genevestigator:Q4V397 Uniprot:Q4V397
        Length = 445

 Score = 77 (32.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
 Identities = 13/35 (37%), Positives = 25/35 (71%)

Query:     1 MGDVEALYSVFVEDPHVLERMDGVAFADTPLLVAA 35
             +G ++ LY+   E+P++LE +D + F +TPL +A+
Sbjct:    11 IGSIDELYAHIHENPYILEIIDAIPFINTPLHIAS 45

 Score = 68 (29.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
 Identities = 17/37 (45%), Positives = 23/37 (62%)

Query:    77 IDVLFGW---LRLSNKE----QILKWKDDDGNTALHM 106
             ++VL GW   LR ++ E    Q L  +D DGNTALH+
Sbjct:   155 LEVLLGWVQRLRQTDAESLEMQFLNKRDQDGNTALHI 191


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.138   0.449    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      123       123   0.00091  102 3  11 22  0.49    30
                                                     29  0.50    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  589 (63 KB)
  Total size of DFA:  147 KB (2089 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.19u 0.18s 12.37t   Elapsed:  00:00:01
  Total cpu time:  12.19u 0.18s 12.37t   Elapsed:  00:00:01
  Start:  Sat May 11 08:37:03 2013   End:  Sat May 11 08:37:04 2013

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