BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046364
(123 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|15237015|ref|NP_192838.1| ankyrin repeat-containing protein [Arabidopsis thaliana]
gi|4539374|emb|CAB40068.1| putative protein [Arabidopsis thaliana]
gi|7267798|emb|CAB81201.1| putative protein [Arabidopsis thaliana]
gi|332657560|gb|AEE82960.1| ankyrin repeat-containing protein [Arabidopsis thaliana]
Length = 406
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 1 MGDVEALYSVFVEDPHVLERMDGVAFADTPLLVAAGCRCWEHPFCDGNGKLKALAGLEAK 60
+GD+E LY + EDP++L+ D V+F +TPL +AA + F LK L+
Sbjct: 48 VGDIERLYELIAEDPNILDHFDKVSFCETPLHIAA--EKGQTHFAMELMTLKPSLALKLN 105
Query: 61 SSLAQPHARGFVGGIAIDVLFGWLRLSNKEQILKWKDDDGNTALHM 106
S P VL GW++ +N+++IL WKD+DGNT H+
Sbjct: 106 VSGFSPLHLALQNNHIQTVLLGWIKRANRKEILDWKDEDGNTVFHI 151
>gi|3513742|gb|AAC33958.1| contains similarity to Zea mays embryogenesis transmembrane protein
(GB:X97570) [Arabidopsis thaliana]
Length = 417
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 18/122 (14%)
Query: 1 MGDVEALYSVFVEDPHVLERMDGVAFADTPLLVAAGCRCWEHPFCDGNGKLKALAGLEAK 60
+GD+E LY + EDP++L+ D V+F +TPL +AA + F LK L+
Sbjct: 43 VGDIERLYELIAEDPNILDHFDKVSFCETPLHIAA--EKGQTHFAMELMTLKPSLALKLN 100
Query: 61 SSLAQP--------HARGFVGGI--------AIDVLFGWLRLSNKEQILKWKDDDGNTAL 104
S P H + V I A VL GW++ +N+++IL WKD+DGNT
Sbjct: 101 VSGFSPLHLALQNNHIQTTVVHISVKNHQCFAFKVLLGWIKRANRKEILDWKDEDGNTVF 160
Query: 105 HM 106
H+
Sbjct: 161 HI 162
>gi|356514663|ref|XP_003526023.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat-containing protein
At3g12360-like [Glycine max]
Length = 377
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 2 GDVEALYSVFVEDPHVLERMDGVAFADTPLLVAA 35
GD++ LY+V E+PHVLE +D + F DTPL VAA
Sbjct: 39 GDIDGLYTVIQENPHVLEDIDSIPFVDTPLHVAA 72
>gi|357517245|ref|XP_003628911.1| Ankyrin-1 [Medicago truncatula]
gi|355522933|gb|AET03387.1| Ankyrin-1 [Medicago truncatula]
Length = 452
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 2 GDVEALYSVFVEDPHVLERMDGVAFADTPLLVAA 35
GDV LY+V +DP+VLER+D + F +TPL +AA
Sbjct: 19 GDVNLLYTVIQDDPYVLERIDLIPFVETPLHIAA 52
>gi|356514671|ref|XP_003526027.1| PREDICTED: ankyrin-3-like [Glycine max]
Length = 399
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 2 GDVEALYSVFVEDPHVLERMDGVAFADTPLLVAAGC 37
GD+ LY+V EDP VLE D ++F +TPL +A+ C
Sbjct: 20 GDINLLYTVIEEDPQVLEHNDLISFVETPLHIASSC 55
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 11/47 (23%)
Query: 76 AIDVLFGWLR-------LSNKEQILKWKDDDGNTALH----MRNSRV 111
A+ +L GWL+ + ++ IL WKD++GNT LH M +S+V
Sbjct: 162 ALQLLVGWLKGTCQKNAMQIEKTILNWKDEEGNTILHVSALMNDSKV 208
>gi|3513747|gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm, score:
11.19) [Arabidopsis thaliana]
Length = 1633
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 1 MGDVEALYSVFVEDPHVLERMDGVAFADTPLLVAA 35
+GD+E LY + EDP++L+ D V+F +TPL +AA
Sbjct: 1459 VGDIERLYELIAEDPNILDHFDQVSFCETPLHIAA 1493
>gi|357517511|ref|XP_003629044.1| Ankyrin repeat protein [Medicago truncatula]
gi|355523066|gb|AET03520.1| Ankyrin repeat protein [Medicago truncatula]
Length = 447
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 2 GDVEALYSVFVEDPHVLERMDGVAFADTPLLVAA 35
GD++ LY+V +DP++LE +D + F +TPL +AA
Sbjct: 17 GDIDLLYTVIQDDPYILEHIDSIPFVETPLHIAA 50
>gi|357516619|ref|XP_003628598.1| Ankyrin repeat-containing protein [Medicago truncatula]
gi|355522620|gb|AET03074.1| Ankyrin repeat-containing protein [Medicago truncatula]
Length = 453
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 2 GDVEALYSVFVEDPHVLERMDGVAFADTPLLVAA 35
GD++ LYSV +DP +LE +D ++F +TPL +AA
Sbjct: 17 GDIDLLYSVIQDDPSILENIDVISFVETPLHIAA 50
>gi|357517641|ref|XP_003629109.1| Ankyrin repeat protein [Medicago truncatula]
gi|355523131|gb|AET03585.1| Ankyrin repeat protein [Medicago truncatula]
Length = 450
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 2 GDVEALYSVFVEDPHVLERMDGVAFADTPLLVAA 35
GD+ LY++ EDP+VLE +D + F +TPL +AA
Sbjct: 18 GDINLLYTLIEEDPYVLEYIDLIPFVETPLHIAA 51
>gi|357475715|ref|XP_003608143.1| Ankyrin repeat-containing protein [Medicago truncatula]
gi|355509198|gb|AES90340.1| Ankyrin repeat-containing protein [Medicago truncatula]
Length = 398
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 2 GDVEALYSVFVEDPHVLERMDGVAFADTPLLVAA 35
GD+ LY++ EDP+VLE +D + F +TPL +AA
Sbjct: 165 GDINLLYTLIEEDPYVLEYIDLIPFVETPLHIAA 198
>gi|357465949|ref|XP_003603259.1| Ankyrin repeat domain-containing protein [Medicago truncatula]
gi|355492307|gb|AES73510.1| Ankyrin repeat domain-containing protein [Medicago truncatula]
Length = 427
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 1 MGDVEALYSVFVEDPHVLERMDGVAFADTPLLVAAG 36
MGD++ L+ + DP++LER + + F DTPL +AA
Sbjct: 11 MGDIDLLFKLIQIDPYILERYNLIPFVDTPLHIAAA 46
Score = 34.7 bits (78), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 7/38 (18%)
Query: 76 AIDVLFGWLRLS-------NKEQILKWKDDDGNTALHM 106
+++L GWLR + ++++L W+D+ GNT LHM
Sbjct: 154 VLEILLGWLRRTCHRRSHHKEKRVLNWEDEAGNTILHM 191
>gi|357456647|ref|XP_003598604.1| Ankyrin repeat-containing protein [Medicago truncatula]
gi|355487652|gb|AES68855.1| Ankyrin repeat-containing protein [Medicago truncatula]
Length = 634
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 2 GDVEALYSVFVEDPHVLERMDGVAFADTPLLVAA 35
GD++ LY+V +DP +LE +D + F +TPL +AA
Sbjct: 17 GDIDLLYTVIQDDPFILEMIDLIPFVETPLHIAA 50
>gi|357515201|ref|XP_003627889.1| Ankyrin repeat-containing protein [Medicago truncatula]
gi|355521911|gb|AET02365.1| Ankyrin repeat-containing protein [Medicago truncatula]
Length = 438
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 2 GDVEALYSVFVEDPHVLERMDGVAFADTPLLVAA 35
GD++ LY+V +DP +LE +D + F +TPL AA
Sbjct: 21 GDIDLLYTVIQDDPSILEHIDLITFVETPLHTAA 54
>gi|7267770|emb|CAB81173.1| putative ankyrin-repeat-containing protein [Arabidopsis thaliana]
Length = 416
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 48/153 (31%)
Query: 1 MGDVEALYSVFVEDPHVLERMDGVAFADTPLLVAA------------------------- 35
+G ++ LY+ E+P++LE +D + F +TPL +A+
Sbjct: 11 IGSIDELYAHIHENPYILEIIDAIPFINTPLHIASASGNLSFAMELMNLKPSFARKLNTY 70
Query: 36 GCRCWEHPFCDGNGKLKALAGLEAKSSLAQPHAR--GFVGG-----IAI--------DVL 80
G +G +L L+ L+ S L + R V G IA+ +VL
Sbjct: 71 GLSPLHLAIEEGQTRL-VLSLLKVDSDLVRLRGREDANVNGETALHIAVSNDRYEELEVL 129
Query: 81 FGW---LRLSNKE----QILKWKDDDGNTALHM 106
GW LR ++ E Q L +D DGNTALH+
Sbjct: 130 LGWVQRLRQTDAESLEMQFLNKRDQDGNTALHI 162
>gi|356545491|ref|XP_003541175.1| PREDICTED: death-associated protein kinase 1-like [Glycine max]
Length = 452
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 2 GDVEALYSVFVEDPHVLERMDGVAFADTPLLVAA 35
GD+ LY++ ED HVL+ MD FA+TPL + A
Sbjct: 15 GDISLLYTLIQEDLHVLDHMDLTPFAETPLHIVA 48
>gi|15242318|ref|NP_197054.1| ankyrin repeat-containing protein [Arabidopsis thaliana]
gi|9755805|emb|CAC01749.1| putative protein [Arabidopsis thaliana]
gi|26451903|dbj|BAC43044.1| unknown protein [Arabidopsis thaliana]
gi|28951039|gb|AAO63443.1| At5g15500 [Arabidopsis thaliana]
gi|332004786|gb|AED92169.1| ankyrin repeat-containing protein [Arabidopsis thaliana]
Length = 457
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 2 GDVEALYSVFVEDPHVLERMDGVAFADTPLLVAA 35
G+++ LY + EDP+VL++ D V F +TPL VAA
Sbjct: 13 GNIDLLYELIHEDPYVLDKTDHVPFVNTPLHVAA 46
>gi|297745677|emb|CBI40931.3| unnamed protein product [Vitis vinifera]
Length = 372
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 48/128 (37%), Gaps = 29/128 (22%)
Query: 2 GDVEALYSVFVEDPHVLERMDGVAFADTPLLVAAGCRCWEHPFCDGNGKLKALAGLEAKS 61
G +EAL + DP +LER ADT L+ +G P C + L
Sbjct: 12 GSIEALLKLLESDPLILERR-----ADTISLLPSG-----SPLCVVEETERGETALHIAV 61
Query: 62 SLAQPHARGFVGGIA-------------------IDVLFGWLRLSNKEQILKWKDDDGNT 102
Q A GG A + VL WLR + ++ KD DGNT
Sbjct: 62 RNNQLEAHKSTGGRAQEEGETALHVAARNNQLDALRVLVEWLRRTKALVVINSKDGDGNT 121
Query: 103 ALHMRNSR 110
LH+ +R
Sbjct: 122 VLHLAAAR 129
>gi|357502699|ref|XP_003621638.1| Serine/threonine protein phosphatase 6 regulatory ankyrin repeat
subunit C [Medicago truncatula]
gi|355496653|gb|AES77856.1| Serine/threonine protein phosphatase 6 regulatory ankyrin repeat
subunit C [Medicago truncatula]
Length = 411
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 25/34 (73%)
Query: 2 GDVEALYSVFVEDPHVLERMDGVAFADTPLLVAA 35
G+++ LY+V +DP +LE +D + F +TPL ++A
Sbjct: 16 GNIDLLYAVIDDDPFILEHIDSIPFVETPLHISA 49
>gi|255539939|ref|XP_002511034.1| ankyrin repeat-containing protein, putative [Ricinus communis]
gi|223550149|gb|EEF51636.1| ankyrin repeat-containing protein, putative [Ricinus communis]
Length = 320
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 24/31 (77%)
Query: 76 AIDVLFGWLRLSNKEQILKWKDDDGNTALHM 106
A++VL W+R +N+E++L KD+ GNT LH+
Sbjct: 153 AVNVLVDWIRGTNREEMLNVKDELGNTVLHL 183
>gi|79344495|ref|NP_172900.2| Ankyrin repeat family protein [Arabidopsis thaliana]
gi|7262691|gb|AAF43949.1|AC012188_26 Contains similarity to a hypothetical protein from Arabidopsis
thaliana gb|AF080119.1 and contains Ankyrin PF|00023
repeats [Arabidopsis thaliana]
gi|332191048|gb|AEE29169.1| Ankyrin repeat family protein [Arabidopsis thaliana]
Length = 441
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 2 GDVEALYSVFVEDPHVLERMDGVAFADTPLLVAA 35
G + LY++ E+P++LE +D V F TPL VAA
Sbjct: 12 GSINELYALIDENPYILENIDAVPFVSTPLHVAA 45
>gi|334182575|ref|NP_001184993.1| Ankyrin repeat family protein [Arabidopsis thaliana]
gi|332191049|gb|AEE29170.1| Ankyrin repeat family protein [Arabidopsis thaliana]
Length = 398
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 2 GDVEALYSVFVEDPHVLERMDGVAFADTPLLVAA 35
G + LY++ E+P++LE +D V F TPL VAA
Sbjct: 12 GSINELYALIDENPYILENIDAVPFVSTPLHVAA 45
>gi|224114660|ref|XP_002332335.1| predicted protein [Populus trichocarpa]
gi|222832582|gb|EEE71059.1| predicted protein [Populus trichocarpa]
Length = 448
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 76 AIDVLFGWLRLSNKEQILKWKDDDGNTALHMRNSRVHWK 114
AI L W+R NKE +L KD+ GNT LH+ + WK
Sbjct: 152 AIKKLVDWIREMNKEYLLNMKDEQGNTVLHLAS----WK 186
>gi|357516989|ref|XP_003628783.1| Ankyrin-2 [Medicago truncatula]
gi|355522805|gb|AET03259.1| Ankyrin-2 [Medicago truncatula]
Length = 601
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 2 GDVEALYSVFVEDPHVLERMDGVAFADTPLLVAA 35
G ++ LY V DP +LE +D + F +TPL +AA
Sbjct: 179 GRIDLLYEVIEVDPSILENIDSIQFVETPLHIAA 212
>gi|3600030|gb|AAC35518.1| contains similarity to ankyrin repeats (Pfam: ank.hmm, score:
13.93, 14.93 and 27.78) [Arabidopsis thaliana]
Length = 427
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 59/164 (35%)
Query: 1 MGDVEALYSVFVEDPHVLERMDGVAFADTPLLVAA------------------------- 35
+G ++ LY+ E+P++LE +D + F +TPL +A+
Sbjct: 11 IGSIDELYAHIHENPYILEIIDAIPFINTPLHIASASGNLSFAMELMNLKPSFARKLNTY 70
Query: 36 GCRCWEHPFCDGNGKLKALAGLEAKSSLAQPHAR-------------GFVGG-----IAI 77
G +G +L L+ L+ S L + R V G IA+
Sbjct: 71 GLSPLHLAIEEGQTRL-VLSLLKVDSDLVRLRGREEFLLACPGCIKDANVNGETALHIAV 129
Query: 78 --------DVLFGW---LRLSNKE----QILKWKDDDGNTALHM 106
+VL GW LR ++ E Q L +D DGNTALH+
Sbjct: 130 SNDRYEELEVLLGWVQRLRQTDAESLEMQFLNKRDQDGNTALHI 173
>gi|356514721|ref|XP_003526052.1| PREDICTED: ankyrin-1-like [Glycine max]
Length = 216
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 2 GDVEALYSVFVEDPHVLERMDGVAFADTPLLVAAGCRCWE 41
+++ LY +DP VLE +D + F TPL VAA +E
Sbjct: 13 NNIDGLYQEIQQDPRVLESIDSIPFVKTPLHVAATLGHFE 52
>gi|356514711|ref|XP_003526047.1| PREDICTED: ankyrin repeat-containing protein At5g02620-like
[Glycine max]
Length = 418
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 3 DVEALYSVFVEDPHVLERMDGVAFADTPLLVAA 35
+++ LY +DP +LE +D + F +TPL VAA
Sbjct: 14 NIDGLYQEIQQDPRILESIDSIPFVETPLHVAA 46
>gi|255640832|gb|ACU20699.1| unknown [Glycine max]
Length = 241
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 1 MGDVEALYSVFVEDPHVLERMDGVAFADTPLLV 33
+GD++ LY + P+VLE+ D + F DTPL V
Sbjct: 11 VGDIDLLYKLIQMQPYVLEQTDFMPFVDTPLHV 43
>gi|356507145|ref|XP_003522331.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat-containing protein
At5g02620-like [Glycine max]
Length = 240
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 1 MGDVEALYSVFVEDPHVLERMDGVAFADTPLLV 33
+GD++ LY + P+VLE+ D + F DTPL V
Sbjct: 11 VGDIDLLYKLIQMQPYVLEQTDFMPFVDTPLHV 43
>gi|71649097|ref|XP_813305.1| ubiquitin-protein ligase [Trypanosoma cruzi strain CL Brener]
gi|70878177|gb|EAN91454.1| ubiquitin-protein ligase, putative [Trypanosoma cruzi]
Length = 395
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 54 LAGLEAKSSLAQPHARGFVGGIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRNSRVHW 113
LAG + A+ R F+ G+ + V WL+L + ++++K D +A+ + + R H
Sbjct: 233 LAGFKLNHESAR-QTRAFLEGLGMIVNLSWLKLFDGKEVMKLFGGDAESAIDVSDWRKHT 291
Query: 114 KYH 116
+YH
Sbjct: 292 QYH 294
>gi|171452356|dbj|BAG15869.1| ankyrin repeat protein [Bruguiera gymnorhiza]
Length = 446
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 7/42 (16%)
Query: 76 AIDVLFGWLR-------LSNKEQILKWKDDDGNTALHMRNSR 110
A VL GWL+ L + Q+L WK+ +GNTALH+ SR
Sbjct: 154 AFQVLLGWLQRCVFRDALFWRRQLLNWKNKEGNTALHIALSR 195
>gi|356514709|ref|XP_003526046.1| PREDICTED: uncharacterized protein LOC100776039 [Glycine max]
Length = 583
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 3 DVEALYSVFVEDPHVLERMDGVAFADTPLLVAA 35
+++ LY +DP +LE +D + F +TP+ VAA
Sbjct: 14 NIDGLYQEIQQDPRILESIDSIPFVETPMHVAA 46
>gi|356518201|ref|XP_003527770.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat-containing protein
At5g02620-like [Glycine max]
Length = 273
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 1 MGDVEALYSVFVEDPHVLERMDGVAFADTPLLV 33
+GD++ LY + P+VLE D + F DTPL V
Sbjct: 11 VGDIDLLYKLIXMQPYVLEHTDFMPFVDTPLHV 43
>gi|42566408|ref|NP_192810.2| ankyrin repeat-containing protein [Arabidopsis thaliana]
gi|66792696|gb|AAY56450.1| At4g10720 [Arabidopsis thaliana]
gi|332657520|gb|AEE82920.1| ankyrin repeat-containing protein [Arabidopsis thaliana]
Length = 445
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 25/37 (67%)
Query: 1 MGDVEALYSVFVEDPHVLERMDGVAFADTPLLVAAGC 37
+G ++ LY+ E+P++LE +D + F +TPL +A+
Sbjct: 11 IGSIDELYAHIHENPYILEIIDAIPFINTPLHIASAS 47
>gi|145333011|ref|NP_001078371.1| ankyrin repeat-containing protein [Arabidopsis thaliana]
gi|62320713|dbj|BAD95381.1| putative ankyrin-repeat-containing protein [Arabidopsis thaliana]
gi|332657521|gb|AEE82921.1| ankyrin repeat-containing protein [Arabidopsis thaliana]
Length = 412
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 25/36 (69%)
Query: 1 MGDVEALYSVFVEDPHVLERMDGVAFADTPLLVAAG 36
+G ++ LY+ E+P++LE +D + F +TPL +A+
Sbjct: 11 IGSIDELYAHIHENPYILEIIDAIPFINTPLHIASA 46
>gi|224134294|ref|XP_002321784.1| predicted protein [Populus trichocarpa]
gi|222868780|gb|EEF05911.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 76 AIDVLFGWLRLSNKEQILKWKDDDGNTALHM 106
AI +L W++ NKE +L KD+ GNT LH+
Sbjct: 152 AIKILGDWIKDMNKEYLLNMKDEQGNTVLHL 182
>gi|71666583|ref|XP_820249.1| ubiquitin-protein ligase [Trypanosoma cruzi strain CL Brener]
gi|70885586|gb|EAN98398.1| ubiquitin-protein ligase, putative [Trypanosoma cruzi]
Length = 1078
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 54 LAGLEAKSSLAQPHARGFVGGIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRNSRVHW 113
LAG + A+ R F+ G+ + V WL+L + ++I+K D +A+ + + R H
Sbjct: 916 LAGFKLNHESAR-QTRAFLEGLGMIVNLSWLKLFDGKEIMKLFGGDAESAIDVSDWRKHT 974
Query: 114 KYH 116
+YH
Sbjct: 975 QYH 977
>gi|15239682|ref|NP_200273.1| ankyrin repeat-containing protein [Arabidopsis thaliana]
gi|332009136|gb|AED96519.1| ankyrin repeat-containing protein [Arabidopsis thaliana]
Length = 431
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 2 GDVEALYSVFVEDPHVLERMDGVAFADTPL 31
G+V+ALY++ +DP++L+ +D + F TPL
Sbjct: 12 GNVDALYALIHKDPYILQNIDVLPFVHTPL 41
>gi|9758954|dbj|BAB09341.1| ankyrin-repeat-containing protein-like [Arabidopsis thaliana]
Length = 389
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 2 GDVEALYSVFVEDPHVLERMDGVAFADTPL 31
G+V+ALY++ +DP++L+ +D + F TPL
Sbjct: 12 GNVDALYALIHKDPYILQNIDVLPFVHTPL 41
>gi|331006038|ref|ZP_08329378.1| hypothetical protein IMCC1989_2734 [gamma proteobacterium IMCC1989]
gi|330420147|gb|EGG94473.1| hypothetical protein IMCC1989_2734 [gamma proteobacterium IMCC1989]
Length = 400
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 7/48 (14%)
Query: 6 ALYSVFVEDPHVLERMDGVAFADTPLLVAAGCR---CWEHPFCDGNGK 50
A Y +VED + L+++ G+ +P+ AAG W HPF DGNG+
Sbjct: 173 ARYMSWVEDVYKLDKIFGL----SPVAAAAGLHHRLAWVHPFQDGNGR 216
>gi|407417078|gb|EKF37932.1| ubiquitin-protein ligase, putative [Trypanosoma cruzi marinkellei]
Length = 1078
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 54 LAGLEAKSSLAQPHARGFVGGIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRNSRVHW 113
LAG + A+ R F+ G+ + V WL+L + ++I+K D +A+ + + R H
Sbjct: 916 LAGFKLNHESAR-QTRAFLEGLGMIVNLSWLKLFDGKEIMKLFGGDAESAIDVSDWRRHT 974
Query: 114 KYH 116
+YH
Sbjct: 975 QYH 977
>gi|158423286|ref|YP_001524578.1| glycine/D-amino acid oxidase [Azorhizobium caulinodans ORS 571]
gi|158330175|dbj|BAF87660.1| putative glycine/D-amino acid oxidase [Azorhizobium caulinodans ORS
571]
Length = 478
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
Query: 42 HPFCDG----NGKLKALAGLEAKSSLAQPHARGFVGGIAIDVLFGWLRLSNKEQILKWKD 97
H CDG GK++ LA L+ + +A G G A V FGW RLS+ + + +
Sbjct: 348 HVICDGIVARGGKIEELAPLQPR------YAYGLAGRAAAAVRFGWRRLSDSIALARAER 401
Query: 98 DDGNTALH 105
D A H
Sbjct: 402 DPARAANH 409
>gi|448240909|ref|YP_007404962.1| hypothetical protein SMWW4_v1c11390 [Serratia marcescens WW4]
gi|445211273|gb|AGE16943.1| hypothetical protein SMWW4_v1c11390 [Serratia marcescens WW4]
Length = 103
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Query: 43 PFCDGNGKLKALAGLEAKS-------SLAQPHARGFVGGIAIDVLFGWLRLSNKEQILKW 95
P+ + +K GLE K+ ++ G + G ++V F W L++ ++ W
Sbjct: 6 PYAGQSFTIKMDNGLEVKNAYHASENTITVEFLNGELRGTIMNVPFQWRSLADGYFMISW 65
Query: 96 KDDDGNTALHMRNSRVHWKY 115
++ D NT +H N H Y
Sbjct: 66 QESDKNTVVHCDNFEKHISY 85
>gi|298708991|emb|CBJ30942.1| Beta-galactosidase, family GH2 [Ectocarpus siliculosus]
Length = 1408
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 22/39 (56%)
Query: 30 PLLVAAGCRCWEHPFCDGNGKLKALAGLEAKSSLAQPHA 68
P L+ A RCWE+P G KLKA L A SS+ Q A
Sbjct: 90 PALLTATPRCWENPLVLGFRKLKARTTLGAFSSVQQARA 128
>gi|225469107|ref|XP_002269257.1| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis
vinifera]
Length = 430
Score = 34.7 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 76 AIDVLFGWLRLSNKEQILKWKDDDGNTALHMRNSR 110
A+ VL L+ SN I+ WKD +GNT LH+ +R
Sbjct: 156 ALRVLVEGLKRSNNLVIINWKDREGNTILHLAAAR 190
>gi|407852106|gb|EKG05757.1| ubiquitin-protein ligase, putative [Trypanosoma cruzi]
Length = 1078
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 54 LAGLEAKSSLAQPHARGFVGGIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRNSRVHW 113
LAG + A+ R F+ G+ + V WL+L + ++++K D +A+ + + R H
Sbjct: 916 LAGFKLNHESAR-QTRAFLEGLGMIVNLSWLKLFDGKEVMKLFGGDAESAIDVSDWRKHT 974
Query: 114 KYH 116
+YH
Sbjct: 975 QYH 977
>gi|336249808|ref|YP_004593518.1| 2-dehydropantoate 2-reductase [Enterobacter aerogenes KCTC 2190]
gi|334735864|gb|AEG98239.1| 2-dehydropantoate 2-reductase [Enterobacter aerogenes KCTC 2190]
Length = 296
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 25/60 (41%)
Query: 11 FVEDPHVLERMDGVAFADTPLLVAAGCRCWEHPFCDGNGKLKALAGLEAKSSLAQPHARG 70
+ DPH LER + F A C W + CD N + AL + SL P+ G
Sbjct: 56 VLTDPHTLERPVKLLFVAVKTTQVADCALWLNALCDENTVVCALQNGVEQESLLDPYVNG 115
>gi|359773412|ref|ZP_09276808.1| copper-transporting ATPase CopB [Gordonia effusa NBRC 100432]
gi|359309373|dbj|GAB19586.1| copper-transporting ATPase CopB [Gordonia effusa NBRC 100432]
Length = 667
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 24/110 (21%)
Query: 14 DPHVLERMDGVAFADTPLLV--AAGCRCWEHPFCDGNGKLKALAGLEAKSSLAQPHARGF 71
+P V+ + + D +L AA R EHP +A+ G LA+P A GF
Sbjct: 369 EPGVVAVVPAAGWTDDEVLAIAAAAERDSEHPLA------RAIVGAADARELARPTATGF 422
Query: 72 VGGIAI---------DVLFGWLRLSNKEQIL------KWKDDDGNTALHM 106
V A+ DV G +L + E + +W DDGNT LH+
Sbjct: 423 VASAAVGVRAEVDGRDVAVGGPKLLDHEGLSALPGSRRWA-DDGNTVLHV 471
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.138 0.449
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,072,788,358
Number of Sequences: 23463169
Number of extensions: 77541292
Number of successful extensions: 153282
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 153212
Number of HSP's gapped (non-prelim): 77
length of query: 123
length of database: 8,064,228,071
effective HSP length: 89
effective length of query: 34
effective length of database: 5,976,006,030
effective search space: 203184205020
effective search space used: 203184205020
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)