Query 046366
Match_columns 128
No_of_seqs 203 out of 1525
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 20:01:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046366.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046366hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gla_A Low molecular weight he 99.9 3.2E-24 1.1E-28 143.2 8.8 85 42-128 2-93 (100)
2 4fei_A Heat shock protein-rela 99.9 6.8E-24 2.3E-28 142.6 7.2 85 42-128 4-90 (102)
3 3q9p_A Heat shock protein beta 99.9 1.5E-21 5.1E-26 127.4 10.2 77 52-128 3-80 (85)
4 4eld_A MJ16.5-P1, small heat s 99.9 8E-22 2.7E-26 142.1 9.8 80 48-128 59-146 (161)
5 1gme_A Heat shock protein 16.9 99.9 6.6E-22 2.3E-26 141.5 8.7 77 52-128 49-133 (151)
6 3aab_A Putative uncharacterize 99.9 7.4E-22 2.5E-26 136.5 7.8 86 40-128 20-111 (123)
7 2wj5_A Heat shock protein beta 99.8 2.9E-20 9.8E-25 124.8 10.0 75 48-128 4-84 (101)
8 3l1e_A Alpha-crystallin A chai 99.8 5.9E-20 2E-24 124.3 9.9 74 49-128 6-85 (106)
9 2y1y_A Alpha-crystallin B chai 99.8 7.3E-20 2.5E-24 120.3 10.0 71 53-128 3-79 (90)
10 2bol_A TSP36, small heat shock 99.8 1.7E-19 5.7E-24 142.4 8.0 76 53-128 230-309 (314)
11 2klr_A Alpha-crystallin B chai 99.8 1.3E-18 4.5E-23 127.3 9.8 75 48-128 66-146 (175)
12 2bol_A TSP36, small heat shock 99.7 1.3E-17 4.6E-22 131.6 8.9 80 47-128 100-184 (314)
13 2xcm_C SGT1-like protein, cyto 98.6 9.5E-08 3.3E-12 61.6 6.4 71 50-128 6-76 (92)
14 1rl1_A Suppressor of G2 allele 98.6 1.1E-07 3.9E-12 63.8 7.1 72 49-128 12-83 (114)
15 3igf_A ALL4481 protein; two-do 98.2 3E-06 1E-10 67.9 7.5 59 57-128 306-365 (374)
16 2k8q_A Protein SHQ1; beta-sand 97.2 0.00046 1.6E-08 48.0 4.9 65 51-128 8-77 (134)
17 1x5m_A Calcyclin-binding prote 97.0 0.0062 2.1E-07 41.3 9.2 73 48-128 22-98 (127)
18 2o30_A Nuclear movement protei 96.8 0.007 2.4E-07 41.3 8.1 68 49-128 7-75 (131)
19 3eud_A Protein SHQ1; CS domain 96.8 0.011 3.9E-07 39.9 8.7 65 51-128 22-91 (115)
20 1wh0_A Ubiquitin carboxyl-term 96.8 0.0022 7.7E-08 44.3 5.3 81 48-128 21-106 (134)
21 1wgv_A KIAA1068 protein; CS do 96.8 0.012 4E-07 39.8 8.7 73 48-128 21-96 (124)
22 3qor_A Nuclear migration prote 96.7 0.013 4.4E-07 39.5 8.4 69 49-128 19-91 (121)
23 1wfi_A Nuclear distribution ge 96.5 0.0064 2.2E-07 41.5 6.2 69 49-128 10-82 (131)
24 2rh0_A NUDC domain-containing 96.4 0.022 7.6E-07 40.1 8.5 67 49-127 16-84 (157)
25 1ejf_A Progesterone receptor P 95.6 0.048 1.6E-06 36.8 6.9 69 50-127 7-75 (125)
26 2cg9_X CO-chaperone protein SB 94.7 0.023 7.8E-07 39.0 3.3 68 56-127 23-91 (134)
27 2kmw_A Uncharacterized protein 92.7 0.27 9.2E-06 34.3 5.8 67 50-127 8-75 (150)
28 3q9p_A Heat shock protein beta 87.7 0.92 3.1E-05 28.2 4.5 29 99-128 7-35 (85)
29 2y1y_A Alpha-crystallin B chai 84.1 1.7 5.7E-05 27.2 4.4 28 100-128 7-34 (90)
30 3gla_A Low molecular weight he 83.5 1.8 6E-05 27.3 4.4 29 99-128 14-42 (100)
31 3l1e_A Alpha-crystallin A chai 82.6 2.1 7.3E-05 27.6 4.6 29 99-128 12-40 (106)
32 2wj5_A Heat shock protein beta 82.1 2.2 7.4E-05 27.3 4.4 28 100-128 12-39 (101)
33 4fei_A Heat shock protein-rela 81.0 2.4 8.3E-05 27.0 4.4 29 99-128 16-44 (102)
34 3qqz_A Putative uncharacterize 77.6 19 0.00066 26.6 9.0 68 58-127 13-85 (255)
35 4eld_A MJ16.5-P1, small heat s 77.2 3.6 0.00012 28.4 4.6 28 100-128 67-94 (161)
36 3aab_A Putative uncharacterize 76.2 4 0.00014 26.8 4.4 28 100-128 35-63 (123)
37 2klr_A Alpha-crystallin B chai 71.4 5 0.00017 28.4 4.2 28 100-128 74-101 (175)
38 1gme_A Heat shock protein 16.9 63.7 9.1 0.00031 26.1 4.1 28 100-128 54-82 (151)
39 2cql_A OK/SW-CL.103, 60S ribos 42.6 64 0.0022 20.5 5.4 17 69-85 20-36 (100)
40 2uwa_A Cellulase; glycoside hy 41.4 37 0.0013 25.4 4.6 41 68-110 31-74 (274)
41 3j21_F 50S ribosomal protein L 39.7 69 0.0024 22.7 5.6 42 69-127 14-55 (184)
42 1rl6_A Protein (ribosomal prot 38.2 1E+02 0.0034 21.7 6.3 41 69-127 11-51 (177)
43 1nkw_E 50S ribosomal protein L 35.2 1.2E+02 0.004 22.1 6.3 41 69-127 39-79 (212)
44 2o30_A Nuclear movement protei 33.0 52 0.0018 21.6 3.9 28 100-127 15-42 (131)
45 3v2d_H 50S ribosomal protein L 31.7 1.2E+02 0.0042 21.3 5.9 41 69-127 12-52 (180)
46 1vq8_E 50S ribosomal protein L 30.7 1.4E+02 0.0048 21.0 6.1 42 69-127 9-50 (178)
47 3jx8_A Putative lipoprotein; s 30.0 1E+02 0.0035 22.2 5.4 36 53-88 37-73 (250)
48 3pet_A Putative adhesin; right 28.3 51 0.0017 23.5 3.4 48 57-108 41-88 (221)
49 2hbp_A Cytoskeleton assembly c 25.2 28 0.00096 21.0 1.2 32 49-80 6-37 (68)
50 2rh0_A NUDC domain-containing 24.9 71 0.0024 21.8 3.5 28 100-127 24-51 (157)
51 3oeq_A Frataxin homolog, mitoc 23.3 55 0.0019 21.8 2.6 13 116-128 49-61 (123)
52 3t3l_A Frataxin, mitochondrial 22.4 48 0.0016 22.3 2.1 15 114-128 40-54 (129)
53 2c3v_A Alpha-amylase G-6; carb 22.1 1E+02 0.0034 19.8 3.6 24 97-123 47-70 (102)
54 1n91_A ORF, hypothetical prote 21.9 1.7E+02 0.0057 18.9 4.7 33 50-83 7-40 (108)
55 1nvp_C Transcription initiatio 21.3 39 0.0013 20.8 1.4 16 113-128 46-61 (76)
56 3bbo_I Ribosomal protein L6; l 20.8 72 0.0025 23.4 2.9 17 69-85 54-70 (223)
57 3iz5_F 60S ribosomal protein L 20.1 2.4E+02 0.0082 20.0 5.9 17 69-85 13-29 (190)
No 1
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.91 E-value=3.2e-24 Score=143.19 Aligned_cols=85 Identities=28% Similarity=0.462 Sum_probs=75.8
Q ss_pred ccCCCCCCCccccCCeEEEEEEeCCCCCCceEEEEeCCEEEEE-------eecCceEEEEeeccceEEEEEECCCCcccc
Q 046366 42 VMFPMTEDPFRETPTSHVITLDIPRMKKDDVKIEVEENRVLRE-------EVEGEKWHRAERPFDKVWRQFRMPMSADLD 114 (128)
Q Consensus 42 ~~~p~~~d~~~E~~~~~~i~~dlPGv~kedI~V~v~~~~l~i~-------~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~ 114 (128)
.|.| ..|.+ |++++|+|.++|||+++++|+|+++++.|.|. ..++.+|+++||.+|.|.|+|.||.+||.+
T Consensus 2 ~~~P-~~di~-e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~ 79 (100)
T 3gla_A 2 QWVP-RVDIK-EEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADAD 79 (100)
T ss_dssp CSCC-CEEEE-ECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTT
T ss_pred CccC-cEEEE-ECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChH
Confidence 3566 45656 99999999999999999999999999999992 124567999999999999999999999999
Q ss_pred ceEEEEeCCEEEEC
Q 046366 115 HVKAHLENGVLRIT 128 (128)
Q Consensus 115 ~I~A~~~nGvL~It 128 (128)
+|+|+|+||+|+|+
T Consensus 80 ~i~A~~~~GvL~I~ 93 (100)
T 3gla_A 80 GITAAGRNGVLEIR 93 (100)
T ss_dssp SCEEEEETTEEEEE
T ss_pred HeEEEEeCCEEEEE
Confidence 99999999999985
No 2
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.90 E-value=6.8e-24 Score=142.56 Aligned_cols=85 Identities=22% Similarity=0.304 Sum_probs=76.1
Q ss_pred ccCCCCCCCccccCCeEEEEEEeCCCCCCceEEEEeCCEEEE--EeecCceEEEEeeccceEEEEEECCCCccccceEEE
Q 046366 42 VMFPMTEDPFRETPTSHVITLDIPRMKKDDVKIEVEENRVLR--EEVEGEKWHRAERPFDKVWRQFRMPMSADLDHVKAH 119 (128)
Q Consensus 42 ~~~p~~~d~~~E~~~~~~i~~dlPGv~kedI~V~v~~~~l~i--~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~I~A~ 119 (128)
.|.| ..|.+ |++++|+|.++|||+++|+|+|+++++.|+| +...+.+++++||.+|.|.|+|.||.+||.++|+|+
T Consensus 4 ~~~P-~~di~-e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~ 81 (102)
T 4fei_A 4 PWTP-AADWR-DAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVAS 81 (102)
T ss_dssp ECCC-CEEEE-EETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEE
T ss_pred cccC-cEEEE-EcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEE
Confidence 4566 45655 9999999999999999999999999999999 333457888999999999999999999999999999
Q ss_pred EeCCEEEEC
Q 046366 120 LENGVLRIT 128 (128)
Q Consensus 120 ~~nGvL~It 128 (128)
|+||+|+|+
T Consensus 82 ~~~GvL~I~ 90 (102)
T 4fei_A 82 LAGGVLTVR 90 (102)
T ss_dssp EETTEEEEE
T ss_pred EECCEEEEE
Confidence 999999985
No 3
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.86 E-value=1.5e-21 Score=127.35 Aligned_cols=77 Identities=16% Similarity=0.264 Sum_probs=62.9
Q ss_pred cccCCeEEEEEEeCCCCCCceEEEEeCCEEEEEeecCceEEEEeeccceEEEEEECCCCccccceEEEEe-CCEEEEC
Q 046366 52 RETPTSHVITLDIPRMKKDDVKIEVEENRVLREEVEGEKWHRAERPFDKVWRQFRMPMSADLDHVKAHLE-NGVLRIT 128 (128)
Q Consensus 52 ~E~~~~~~i~~dlPGv~kedI~V~v~~~~l~i~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~I~A~~~-nGvL~It 128 (128)
+|++++|.|.+||||++||+|+|+++++.|+|...........++.+|.|.|+|.||.+||.++|+|+|+ ||+|+|+
T Consensus 3 ~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~ 80 (85)
T 3q9p_A 3 SHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVE 80 (85)
T ss_dssp CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEE
T ss_pred cCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEE
Confidence 4899999999999999999999999999999933222111112345789999999999999999999998 9999985
No 4
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.86 E-value=8e-22 Score=142.08 Aligned_cols=80 Identities=19% Similarity=0.312 Sum_probs=73.1
Q ss_pred CCCccccCCeEEEEEEeCCCCCCceEEEEeCCEEEEE-------eecCceEEEEee-ccceEEEEEECCCCccccceEEE
Q 046366 48 EDPFRETPTSHVITLDIPRMKKDDVKIEVEENRVLRE-------EVEGEKWHRAER-PFDKVWRQFRMPMSADLDHVKAH 119 (128)
Q Consensus 48 ~d~~~E~~~~~~i~~dlPGv~kedI~V~v~~~~l~i~-------~~~~~~~~~~Er-~~g~F~R~~~LP~~vd~~~I~A~ 119 (128)
.|.+ |++++|+|.++|||+++|||+|+++++.|+|. ..++.+++++|| .+|.|.|+|.||.+||.++|+|+
T Consensus 59 vdi~-e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A~ 137 (161)
T 4eld_A 59 ISII-EGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAK 137 (161)
T ss_dssp EEEE-ECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEEE
T ss_pred eeEE-EeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEEE
Confidence 5655 99999999999999999999999999999992 125567999999 99999999999999999999999
Q ss_pred EeCCEEEEC
Q 046366 120 LENGVLRIT 128 (128)
Q Consensus 120 ~~nGvL~It 128 (128)
|+||+|+|+
T Consensus 138 ~~nGvL~I~ 146 (161)
T 4eld_A 138 FENGVLSVI 146 (161)
T ss_dssp EETTEEEEE
T ss_pred EECCEEEEE
Confidence 999999995
No 5
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.86 E-value=6.6e-22 Score=141.46 Aligned_cols=77 Identities=48% Similarity=0.780 Sum_probs=70.0
Q ss_pred cccCCeEEEEEEeCCCCCCceEEEEe-CCEEEEE-------eecCceEEEEeeccceEEEEEECCCCccccceEEEEeCC
Q 046366 52 RETPTSHVITLDIPRMKKDDVKIEVE-ENRVLRE-------EVEGEKWHRAERPFDKVWRQFRMPMSADLDHVKAHLENG 123 (128)
Q Consensus 52 ~E~~~~~~i~~dlPGv~kedI~V~v~-~~~l~i~-------~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~I~A~~~nG 123 (128)
.|++++|+|.++|||++||+|+|+++ ++.|+|. +.++.+|+++||.+|.|.|+|.||.+|+.++|+|+|+||
T Consensus 49 ~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~nG 128 (151)
T 1gme_A 49 KETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENG 128 (151)
T ss_dssp EECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCEEEEETT
T ss_pred EEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceEEEEECC
Confidence 39999999999999999999999995 6788882 234568999999999999999999999999999999999
Q ss_pred EEEEC
Q 046366 124 VLRIT 128 (128)
Q Consensus 124 vL~It 128 (128)
+|+|+
T Consensus 129 vL~I~ 133 (151)
T 1gme_A 129 VLTVT 133 (151)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99985
No 6
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.86 E-value=7.4e-22 Score=136.52 Aligned_cols=86 Identities=27% Similarity=0.430 Sum_probs=74.9
Q ss_pred ccccCCCCCCCccccCCeEEEEEEeCCCCCCceEEEEeC-CEEEEEee----cCceEEEEeeccceEEEEEECCCCcccc
Q 046366 40 FDVMFPMTEDPFRETPTSHVITLDIPRMKKDDVKIEVEE-NRVLREEV----EGEKWHRAERPFDKVWRQFRMPMSADLD 114 (128)
Q Consensus 40 ~~~~~p~~~d~~~E~~~~~~i~~dlPGv~kedI~V~v~~-~~l~i~~~----~~~~~~~~Er~~g~F~R~~~LP~~vd~~ 114 (128)
+..+.| ..|.+ |++++|+|.++|||++|++|+|++++ +.|+|... .+.+|+++||.+ .|.|+|.||.+|+.+
T Consensus 20 ~~~~~P-~~di~-e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~-~f~R~~~LP~~vd~~ 96 (123)
T 3aab_A 20 YELVYP-PVDMY-EEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPK-YVRKVIRLPYNVAKD 96 (123)
T ss_dssp HHHHCS-CEEEE-EETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCCCSCEEEECSCS-EEEEEEECSSEECTT
T ss_pred cccCCC-cEEEE-EcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccCCCeEEEEEEeE-EEEEEEECCCCcCcc
Confidence 344556 45555 99999999999999999999999999 99999221 246899999999 999999999999999
Q ss_pred ce-EEEEeCCEEEEC
Q 046366 115 HV-KAHLENGVLRIT 128 (128)
Q Consensus 115 ~I-~A~~~nGvL~It 128 (128)
+| +|+|+||+|+|+
T Consensus 97 ~i~~A~~~~GvL~I~ 111 (123)
T 3aab_A 97 AEISGKYENGVLTIR 111 (123)
T ss_dssp CCCEEEEETTEEEEE
T ss_pred hhCeeEEcCCEEEEE
Confidence 99 999999999985
No 7
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.83 E-value=2.9e-20 Score=124.79 Aligned_cols=75 Identities=23% Similarity=0.387 Sum_probs=64.7
Q ss_pred CCCccccCCeEEEEEEeCCCCCCceEEEEeCCEEEEE---e--ecCceEEEEeeccceEEEEEECCCCccccceEEEE-e
Q 046366 48 EDPFRETPTSHVITLDIPRMKKDDVKIEVEENRVLRE---E--VEGEKWHRAERPFDKVWRQFRMPMSADLDHVKAHL-E 121 (128)
Q Consensus 48 ~d~~~E~~~~~~i~~dlPGv~kedI~V~v~~~~l~i~---~--~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~I~A~~-~ 121 (128)
.|.+ |++++|+|.++|||+++|||+|+++++.|.|. + .++..|+++| |.|+|.||.+||.++|+|+| +
T Consensus 4 vdi~-e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~e-----F~R~~~LP~~vd~~~i~A~~s~ 77 (101)
T 2wj5_A 4 AQVP-TDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIARE-----FHRRYRLPPGVDPAAVTSALSP 77 (101)
T ss_dssp CCCC-CCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEE-----EEEEEECCTTBCTTCCEEEECT
T ss_pred EEEE-EeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEE-----EEEEEECCCCcChhHCEEEECC
Confidence 4656 99999999999999999999999999999992 1 1234555554 99999999999999999999 8
Q ss_pred CCEEEEC
Q 046366 122 NGVLRIT 128 (128)
Q Consensus 122 nGvL~It 128 (128)
||+|+|+
T Consensus 78 nGvL~I~ 84 (101)
T 2wj5_A 78 EGVLSIQ 84 (101)
T ss_dssp TSEEEEE
T ss_pred CCEEEEE
Confidence 9999985
No 8
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.82 E-value=5.9e-20 Score=124.30 Aligned_cols=74 Identities=20% Similarity=0.398 Sum_probs=63.7
Q ss_pred CCccccCCeEEEEEEeCCCCCCceEEEEeCCEEEEEe-----ecCceEEEEeeccceEEEEEECCCCccccceEEEE-eC
Q 046366 49 DPFRETPTSHVITLDIPRMKKDDVKIEVEENRVLREE-----VEGEKWHRAERPFDKVWRQFRMPMSADLDHVKAHL-EN 122 (128)
Q Consensus 49 d~~~E~~~~~~i~~dlPGv~kedI~V~v~~~~l~i~~-----~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~I~A~~-~n 122 (128)
+.+ |++++|+|.+||||++||||+|+++++.|.|.. .++..|.++ .|.|+|.||.+||.++|+|+| +|
T Consensus 6 ~i~-e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~-----eF~R~~~LP~~vd~~~i~A~~s~~ 79 (106)
T 3l1e_A 6 EVR-SDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISR-----EFHRRYRLPSNVDQSALSCSLSAD 79 (106)
T ss_dssp EEE-ECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEE-----EEEEEEECCTTBCTTSCEEEECTT
T ss_pred EEE-EcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEE-----EEEEEEECCCCcChhHcEEEECCC
Confidence 444 999999999999999999999999999999921 233445544 499999999999999999999 89
Q ss_pred CEEEEC
Q 046366 123 GVLRIT 128 (128)
Q Consensus 123 GvL~It 128 (128)
|+|+|+
T Consensus 80 GvL~I~ 85 (106)
T 3l1e_A 80 GMLTFS 85 (106)
T ss_dssp SEEEEE
T ss_pred CEEEEE
Confidence 999985
No 9
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.82 E-value=7.3e-20 Score=120.32 Aligned_cols=71 Identities=15% Similarity=0.361 Sum_probs=59.6
Q ss_pred ccCCeEEEEEEeCCCCCCceEEEEeCCEEEEEe-----ecCceEEEEeeccceEEEEEECCCCccccceEEEE-eCCEEE
Q 046366 53 ETPTSHVITLDIPRMKKDDVKIEVEENRVLREE-----VEGEKWHRAERPFDKVWRQFRMPMSADLDHVKAHL-ENGVLR 126 (128)
Q Consensus 53 E~~~~~~i~~dlPGv~kedI~V~v~~~~l~i~~-----~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~I~A~~-~nGvL~ 126 (128)
+++++|+|.++|||++++||+|+++++.|+|.. .++..|+++ .|.|+|.||.+||.++|+|+| +||+|+
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~-----ef~R~~~LP~~vd~~~i~A~~~~~GvL~ 77 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISR-----EFHRKYRIPADVDPLTITSSMSSDGVLT 77 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEE-----EEEEEEECCTTBCGGGCEEEECTTSEEE
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEE-----EEEEEEECCCCcChhHcEEEECCCCEEE
Confidence 788999999999999999999999999999921 234455554 499999999999999999999 899999
Q ss_pred EC
Q 046366 127 IT 128 (128)
Q Consensus 127 It 128 (128)
|+
T Consensus 78 I~ 79 (90)
T 2y1y_A 78 VN 79 (90)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 10
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.79 E-value=1.7e-19 Score=142.44 Aligned_cols=76 Identities=17% Similarity=0.333 Sum_probs=60.0
Q ss_pred ccCCeEEEEEEe-CCCCCCceEEEEeCCEEEE---EeecCceEEEEeeccceEEEEEECCCCccccceEEEEeCCEEEEC
Q 046366 53 ETPTSHVITLDI-PRMKKDDVKIEVEENRVLR---EEVEGEKWHRAERPFDKVWRQFRMPMSADLDHVKAHLENGVLRIT 128 (128)
Q Consensus 53 E~~~~~~i~~dl-PGv~kedI~V~v~~~~l~i---~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~I~A~~~nGvL~It 128 (128)
+++++|++.++| ||++||||+|++++|.|+| ++.+...++++||.+|.|.|+|.||++||.++|+|+|+||||+|+
T Consensus 230 ~~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~dGvL~i~ 309 (314)
T 2bol_A 230 DGSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAEIVDGLMVVE 309 (314)
T ss_dssp TSCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEEECSSEECGGGCEEEEETTEEEEE
T ss_pred CCCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEEEeCCEEEEE
Confidence 467799999999 9999999999999999999 223334678899999999999999999999999999999999985
No 11
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.77 E-value=1.3e-18 Score=127.26 Aligned_cols=75 Identities=17% Similarity=0.348 Sum_probs=63.0
Q ss_pred CCCccccCCeEEEEEEeCCCCCCceEEEEeCCEEEEE-----eecCceEEEEeeccceEEEEEECCCCccccceEEEE-e
Q 046366 48 EDPFRETPTSHVITLDIPRMKKDDVKIEVEENRVLRE-----EVEGEKWHRAERPFDKVWRQFRMPMSADLDHVKAHL-E 121 (128)
Q Consensus 48 ~d~~~E~~~~~~i~~dlPGv~kedI~V~v~~~~l~i~-----~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~I~A~~-~ 121 (128)
.|.+ |++++|+|.+||||++||||+|+++++.|+|. +.++..++++| |.|+|.||.+||.++|+|+| +
T Consensus 66 ~dv~-e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~re-----F~R~~~LP~~Vd~~~i~A~~s~ 139 (175)
T 2klr_A 66 SEMR-LEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISRE-----FHRKYRIPADVDPLTITSSLSS 139 (175)
T ss_dssp ---C-CCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEE-----EEEEEECTTTCCTTTCEEEECT
T ss_pred eEEE-EcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEE-----EEEEEECCCCcChhHeEEEEcC
Confidence 4555 99999999999999999999999999999992 12234555544 99999999999999999999 7
Q ss_pred CCEEEEC
Q 046366 122 NGVLRIT 128 (128)
Q Consensus 122 nGvL~It 128 (128)
||||+|+
T Consensus 140 dGvL~I~ 146 (175)
T 2klr_A 140 DGVLTVN 146 (175)
T ss_dssp TSCEEEE
T ss_pred CCEEEEE
Confidence 9999995
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.72 E-value=1.3e-17 Score=131.58 Aligned_cols=80 Identities=19% Similarity=0.368 Sum_probs=66.8
Q ss_pred CCCCccccCC----eEEEEEEeCCCCCCceEEEEeCCEEEEEeecCceEEEEeeccceEEEEEECCCCccccceEEEEe-
Q 046366 47 TEDPFRETPT----SHVITLDIPRMKKDDVKIEVEENRVLREEVEGEKWHRAERPFDKVWRQFRMPMSADLDHVKAHLE- 121 (128)
Q Consensus 47 ~~d~~~E~~~----~~~i~~dlPGv~kedI~V~v~~~~l~i~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~I~A~~~- 121 (128)
..|.+ |+++ +|+|.+||||++||+|+|+++++.|+|.......- ..++.+|.|.|+|.||.+||.++|+|+|+
T Consensus 100 ~vDi~-E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~-e~~r~~g~F~R~~~LP~~Vd~e~i~A~~~~ 177 (314)
T 2bol_A 100 LKDAY-EVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVAC-GDAAMSESVGRSIPLPPSVDRNHIQATITT 177 (314)
T ss_dssp GGGCE-EECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSST-TCCCBCCCEEEEEECCTTBCGGGCEEEECS
T ss_pred ccceE-EcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccC-CCCEEEEEEEEEEECCCCccccccEEEEeC
Confidence 45666 8888 99999999999999999999999999932211100 02378899999999999999999999999
Q ss_pred CCEEEEC
Q 046366 122 NGVLRIT 128 (128)
Q Consensus 122 nGvL~It 128 (128)
||||+|+
T Consensus 178 nGVL~I~ 184 (314)
T 2bol_A 178 DDVLVIE 184 (314)
T ss_dssp SSEEEEE
T ss_pred CCEEEEE
Confidence 9999995
No 13
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=98.61 E-value=9.5e-08 Score=61.63 Aligned_cols=71 Identities=18% Similarity=0.121 Sum_probs=60.3
Q ss_pred CccccCCeEEEEEEeCCCCCCceEEEEeCCEEEEEeecCceEEEEeeccceEEEEEECCCCccccceEEEEeCCEEEEC
Q 046366 50 PFRETPTSHVITLDIPRMKKDDVKIEVEENRVLREEVEGEKWHRAERPFDKVWRQFRMPMSADLDHVKAHLENGVLRIT 128 (128)
Q Consensus 50 ~~~E~~~~~~i~~dlPGv~kedI~V~v~~~~l~i~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~I~A~~~nGvL~It 128 (128)
.|.++++...|.+.+||+.+++++|++.++.+.+...... ...|...+.|+..|++++.++++.+|.|+|+
T Consensus 6 ~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~~--------~~~y~~~~~L~~~I~~~~s~~~~~~~~l~i~ 76 (92)
T 2xcm_C 6 EYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVPG--------EDAYYLQPRLFGKIIPDKCKYEVLSTKIEIC 76 (92)
T ss_dssp EEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCTT--------SCCEEECCBBSSCBCGGGCEEEECSSCEEEE
T ss_pred cEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcCC--------CcEEEEeeEcCCccCchhEEEEEECCEEEEE
Confidence 4679999999999999999999999999999888432211 1258889999999999999999999988874
No 14
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.61 E-value=1.1e-07 Score=63.83 Aligned_cols=72 Identities=17% Similarity=0.129 Sum_probs=61.0
Q ss_pred CCccccCCeEEEEEEeCCCCCCceEEEEeCCEEEEEeecCceEEEEeeccceEEEEEECCCCccccceEEEEeCCEEEEC
Q 046366 49 DPFRETPTSHVITLDIPRMKKDDVKIEVEENRVLREEVEGEKWHRAERPFDKVWRQFRMPMSADLDHVKAHLENGVLRIT 128 (128)
Q Consensus 49 d~~~E~~~~~~i~~dlPGv~kedI~V~v~~~~l~i~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~I~A~~~nGvL~It 128 (128)
-.|.++++...|.+++||+++++++|++.++.+.+...... ...|...+.|+..|++++.++++.+|.|+|+
T Consensus 12 ~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~~--------~~~y~~~~~L~~~I~~e~s~~~~~~~~l~i~ 83 (114)
T 1rl1_A 12 YDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPS--------GEDYNLKLELLHPIIPEQSTFKVLSTKIEIK 83 (114)
T ss_dssp EEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECTT--------SSEEEEEECBSSCCCGGGEEEEECSSSEEEE
T ss_pred ccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeCC--------CcEEEEEeeCCCcCCccccEEEEECCEEEEE
Confidence 34779999999999999999999999999999888532211 1258889999999999999999999998874
No 15
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.22 E-value=3e-06 Score=67.94 Aligned_cols=59 Identities=22% Similarity=0.245 Sum_probs=53.1
Q ss_pred eEEEEEEeCCCCCCceEEEEeCCEEEEEeecCceEEEEeeccceEEEEEECCCCc-cccceEEEEeCCEEEEC
Q 046366 57 SHVITLDIPRMKKDDVKIEVEENRVLREEVEGEKWHRAERPFDKVWRQFRMPMSA-DLDHVKAHLENGVLRIT 128 (128)
Q Consensus 57 ~~~i~~dlPGv~kedI~V~v~~~~l~i~~~~~~~~~~~Er~~g~F~R~~~LP~~v-d~~~I~A~~~nGvL~It 128 (128)
.|.+.+.|||++|++|++...++.|+|+ .|.|+|.+.||... ...-..|+|+||.|+|+
T Consensus 306 ~~~~~l~lP~~~~~~~~l~~~gdeL~v~-------------~g~~rR~i~LP~~L~~~~v~~A~~~~~~L~i~ 365 (374)
T 3igf_A 306 NRQVRLFLPGFDKKQVKLTQYGPEVTVE-------------AGDQRRNIFLPPALSGRPITGAKFQNNYLIIS 365 (374)
T ss_dssp TTEEEEECTTCCGGGCEEEEETTEEEEE-------------ETTEEEEEECCTTTTTCCEEEEEEETTEEEEE
T ss_pred cEEEEEECCCCCHHHeEEEEECCeEEEE-------------ECCEeecccCCHHHcCCCccccEEECCEEEEE
Confidence 7999999999999999999999999997 57899999999987 44457799999999984
No 16
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=97.21 E-value=0.00046 Score=48.05 Aligned_cols=65 Identities=12% Similarity=0.290 Sum_probs=54.9
Q ss_pred ccccCCeEEEEEEeCCCC--CCceEEEEeCCEEEEEeecCceEEEEeeccceEEEEEECCCCc-cccceEEEE--eCCEE
Q 046366 51 FRETPTSHVITLDIPRMK--KDDVKIEVEENRVLREEVEGEKWHRAERPFDKVWRQFRMPMSA-DLDHVKAHL--ENGVL 125 (128)
Q Consensus 51 ~~E~~~~~~i~~dlPGv~--kedI~V~v~~~~l~i~~~~~~~~~~~Er~~g~F~R~~~LP~~v-d~~~I~A~~--~nGvL 125 (128)
++++++..+|.+.+|.++ ..++++.+++..+... ...|.-++.||..| +.+..+|+| +.|.|
T Consensus 8 itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~-------------~~PYyLRL~LP~~V~e~~~~kA~YD~d~~~~ 74 (134)
T 2k8q_A 8 ITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFH-------------LSPYYLRLRFPHELIDDERSTAQYDSKDECI 74 (134)
T ss_dssp EEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEEC-------------SSSSCEEECCSSCEECCSSCEEEEETTTTEE
T ss_pred EEECCCEEEEEEEcCccccCccccEEEEeCCEEEEe-------------cCCeEEEecCCCeeecCCCcceeEeccCCEE
Confidence 458899999999999999 8999999999766553 22467789999999 889999999 47999
Q ss_pred EEC
Q 046366 126 RIT 128 (128)
Q Consensus 126 ~It 128 (128)
+|+
T Consensus 75 ~Vt 77 (134)
T 2k8q_A 75 NVK 77 (134)
T ss_dssp EEE
T ss_pred EEE
Confidence 985
No 17
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.03 E-value=0.0062 Score=41.32 Aligned_cols=73 Identities=5% Similarity=0.026 Sum_probs=58.2
Q ss_pred CCCccccCCeEEEEEEeCCC---CCCceEEEEeCCEEEEEeecCceEEEEeeccceEEEEEE-CCCCccccceEEEEeCC
Q 046366 48 EDPFRETPTSHVITLDIPRM---KKDDVKIEVEENRVLREEVEGEKWHRAERPFDKVWRQFR-MPMSADLDHVKAHLENG 123 (128)
Q Consensus 48 ~d~~~E~~~~~~i~~dlPGv---~kedI~V~v~~~~l~i~~~~~~~~~~~Er~~g~F~R~~~-LP~~vd~~~I~A~~~nG 123 (128)
...|.++++...|.+.+||+ +++++.|++..+.+.+.-..... ..|.-.+. |-..|++++.+.+..++
T Consensus 22 ~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~~--------~~y~~~~~~L~~~I~~e~S~~~v~~~ 93 (127)
T 1x5m_A 22 NYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNG--------KSYSMIVNNLLKPISVEGSSKKVKTD 93 (127)
T ss_dssp SCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCSS--------SCEEEEEECBSSCCCTTTCEEEEETT
T ss_pred EEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcCCC--------CcEEEEhHHhcCccCcccCEEEEeCC
Confidence 34588999999999999999 89999999999998884321110 14666775 99999999999888888
Q ss_pred EEEEC
Q 046366 124 VLRIT 128 (128)
Q Consensus 124 vL~It 128 (128)
.+.|+
T Consensus 94 kVei~ 98 (127)
T 1x5m_A 94 TVLIL 98 (127)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77763
No 18
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=96.82 E-value=0.007 Score=41.32 Aligned_cols=68 Identities=10% Similarity=0.143 Sum_probs=53.2
Q ss_pred CCccccCCeEEEEEEeC-CCCCCceEEEEeCCEEEEEeecCceEEEEeeccceEEEEEECCCCccccceEEEEeCCEEEE
Q 046366 49 DPFRETPTSHVITLDIP-RMKKDDVKIEVEENRVLREEVEGEKWHRAERPFDKVWRQFRMPMSADLDHVKAHLENGVLRI 127 (128)
Q Consensus 49 d~~~E~~~~~~i~~dlP-Gv~kedI~V~v~~~~l~i~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~I~A~~~nGvL~I 127 (128)
..|.++.+...|.+.+| |+++++++|.+..+.+.+... +. . .-...|...|+++....++++|-|.|
T Consensus 7 y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~-g~----------~-~~~~~L~~~I~~e~S~w~i~~~kv~i 74 (131)
T 2o30_A 7 YTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQ-GE----------I-VIDGELLHEVDVSSLWWVINGDVVDV 74 (131)
T ss_dssp CEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEET-TE----------E-EEEEEBSSCEEEEEEEEEEETTEEEE
T ss_pred EEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEEC-CE----------e-eEccccccccccccCEEEEeCCEEEE
Confidence 45789999999999996 999999999999999988532 11 1 23467889999999999999987766
Q ss_pred C
Q 046366 128 T 128 (128)
Q Consensus 128 t 128 (128)
+
T Consensus 75 ~ 75 (131)
T 2o30_A 75 N 75 (131)
T ss_dssp E
T ss_pred E
Confidence 3
No 19
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=96.79 E-value=0.011 Score=39.88 Aligned_cols=65 Identities=12% Similarity=0.290 Sum_probs=53.6
Q ss_pred ccccCCeEEEEEEeCCCC--CCceEEEEeCCEEEEEeecCceEEEEeeccceEEEEEECCCCc-cccceEEEE--eCCEE
Q 046366 51 FRETPTSHVITLDIPRMK--KDDVKIEVEENRVLREEVEGEKWHRAERPFDKVWRQFRMPMSA-DLDHVKAHL--ENGVL 125 (128)
Q Consensus 51 ~~E~~~~~~i~~dlPGv~--kedI~V~v~~~~l~i~~~~~~~~~~~Er~~g~F~R~~~LP~~v-d~~~I~A~~--~nGvL 125 (128)
++++++..+|.+.+|-++ ..++++.++++..... ...|.-++.||..+ +.+.-+|+| ++|.+
T Consensus 22 itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~-------------~~PYyLRL~lP~~vved~~~~A~YD~d~g~~ 88 (115)
T 3eud_A 22 ITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFH-------------LSPYYLRLRFPHELIDDERSTAQYDSKDECI 88 (115)
T ss_dssp EEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEE-------------ETTEEEEEECSSCEECSTTCEEEEETTTTEE
T ss_pred EEECCCEEEEEEEcCceecccCccEEEEeCCEEEEe-------------cCCeEEEEecCcceecCCCcceEEeCCCcEE
Confidence 568899999999999877 8899999999865543 12577789999998 778889999 58999
Q ss_pred EEC
Q 046366 126 RIT 128 (128)
Q Consensus 126 ~It 128 (128)
+|+
T Consensus 89 ~v~ 91 (115)
T 3eud_A 89 NVK 91 (115)
T ss_dssp EEE
T ss_pred EEE
Confidence 885
No 20
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=96.79 E-value=0.0022 Score=44.34 Aligned_cols=81 Identities=11% Similarity=0.114 Sum_probs=58.9
Q ss_pred CCCcccc-CCeEEEEEEeCCCCCCceEEEEeCCEEEEEeecC-ceEEEEeeccc---eEEEEEECCCCccccceEEEEeC
Q 046366 48 EDPFRET-PTSHVITLDIPRMKKDDVKIEVEENRVLREEVEG-EKWHRAERPFD---KVWRQFRMPMSADLDHVKAHLEN 122 (128)
Q Consensus 48 ~d~~~E~-~~~~~i~~dlPGv~kedI~V~v~~~~l~i~~~~~-~~~~~~Er~~g---~F~R~~~LP~~vd~~~I~A~~~n 122 (128)
...|.++ .+...|.+.++++.+++++|++..+.+.+.-... ....+.-...| .|.-.+.|-..|++++.+.+..+
T Consensus 21 r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I~pe~S~~~v~~ 100 (134)
T 1wh0_A 21 KNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCTFCFTA 100 (134)
T ss_dssp CEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCEEEEEEEEEECS
T ss_pred CeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcccccccccCcceeEEEeccccccCCchhCEEEEeC
Confidence 4458899 9999999999999999999999999988842211 10000000011 57777889999999998888888
Q ss_pred CEEEEC
Q 046366 123 GVLRIT 128 (128)
Q Consensus 123 GvL~It 128 (128)
+.+.|+
T Consensus 101 ~kIeI~ 106 (134)
T 1wh0_A 101 SRIDIC 106 (134)
T ss_dssp SEEEEE
T ss_pred CEEEEE
Confidence 877663
No 21
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=96.76 E-value=0.012 Score=39.81 Aligned_cols=73 Identities=12% Similarity=0.223 Sum_probs=56.4
Q ss_pred CCCccccCCeEEEEEEeC-CC-CCCceEEEEeCCEEEEEeecCceEEEEeeccceEEEEEECCCCccccceEEEEeCCE-
Q 046366 48 EDPFRETPTSHVITLDIP-RM-KKDDVKIEVEENRVLREEVEGEKWHRAERPFDKVWRQFRMPMSADLDHVKAHLENGV- 124 (128)
Q Consensus 48 ~d~~~E~~~~~~i~~dlP-Gv-~kedI~V~v~~~~l~i~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~I~A~~~nGv- 124 (128)
.-.|.++.+...|.+.+| |+ ++++++|.+..+.+.+....... ..+.-...|...|+++....+.++|-
T Consensus 21 ~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~~--------~~~~~~~~L~~~I~~e~S~w~i~~~k~ 92 (124)
T 1wgv_A 21 NYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEENG--------ERVLMEGKLTHKINTESSLWSLEPGKC 92 (124)
T ss_dssp SCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSSS--------EEEEEEEEBSSCBCTTTCEEEECTTSE
T ss_pred cEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEccCC--------CceEEcccccCcCCCcCCEEEEeCCCE
Confidence 345889999999999999 88 89999999999999885322110 01234567999999999999998874
Q ss_pred EEEC
Q 046366 125 LRIT 128 (128)
Q Consensus 125 L~It 128 (128)
|.|+
T Consensus 93 v~i~ 96 (124)
T 1wgv_A 93 VLVN 96 (124)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7663
No 22
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=96.67 E-value=0.013 Score=39.55 Aligned_cols=69 Identities=7% Similarity=0.094 Sum_probs=55.1
Q ss_pred CCccccCCeEEEEEEeCC---CCCCceEEEEeCCEEEEEeecCceEEEEeeccceEEEEEECCCCccccceEEEEeCC-E
Q 046366 49 DPFRETPTSHVITLDIPR---MKKDDVKIEVEENRVLREEVEGEKWHRAERPFDKVWRQFRMPMSADLDHVKAHLENG-V 124 (128)
Q Consensus 49 d~~~E~~~~~~i~~dlPG---v~kedI~V~v~~~~l~i~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~I~A~~~nG-v 124 (128)
..|.++.+...|.+.+|. +++++++|.+..+.+.+..... .+.-.-.|...|+++....++++| .
T Consensus 19 y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~kg~-----------~~~~~g~L~~~I~~deS~w~i~~~~~ 87 (121)
T 3qor_A 19 YRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQ-----------PAIIDGELYNEVKVEESSWLIADGAV 87 (121)
T ss_dssp CEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEETTS-----------CCSEEEEBSSCBCGGGCEEEEETTTE
T ss_pred EEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEcCc-----------ceEEeccccccccccccEEEEcCCCE
Confidence 458899999999999994 7999999999999988843221 122345788999999999999998 7
Q ss_pred EEEC
Q 046366 125 LRIT 128 (128)
Q Consensus 125 L~It 128 (128)
|.|+
T Consensus 88 i~i~ 91 (121)
T 3qor_A 88 VTVH 91 (121)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7763
No 23
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=96.53 E-value=0.0064 Score=41.46 Aligned_cols=69 Identities=10% Similarity=0.123 Sum_probs=54.2
Q ss_pred CCccccCCeEEEEEEeC-C--CCCCceEEEEeCCEEEEEeecCceEEEEeeccceEEEEEECCCCccccceEEEEeCC-E
Q 046366 49 DPFRETPTSHVITLDIP-R--MKKDDVKIEVEENRVLREEVEGEKWHRAERPFDKVWRQFRMPMSADLDHVKAHLENG-V 124 (128)
Q Consensus 49 d~~~E~~~~~~i~~dlP-G--v~kedI~V~v~~~~l~i~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~I~A~~~nG-v 124 (128)
-.|.++.+...|.+.+| | +++++++|.+..+.+.+..... . +.-...|...|+++....+.++| .
T Consensus 10 y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~kg~-~----------~~~~~~L~~~I~~e~s~w~i~~~k~ 78 (131)
T 1wfi_A 10 YRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQ-P----------PVVDGELYNEVKVEESSWLIEDGKV 78 (131)
T ss_dssp SEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEETTS-C----------CSBCSCBSSCBCSTTCEEEEETTTE
T ss_pred EEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEECCc-e----------EEEecccccccccccCEEEEcCCCE
Confidence 45779999999999999 6 8999999999999998853221 1 11234678899999999999988 6
Q ss_pred EEEC
Q 046366 125 LRIT 128 (128)
Q Consensus 125 L~It 128 (128)
|.|+
T Consensus 79 v~i~ 82 (131)
T 1wfi_A 79 VTVH 82 (131)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7663
No 24
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=96.39 E-value=0.022 Score=40.14 Aligned_cols=67 Identities=18% Similarity=0.226 Sum_probs=54.4
Q ss_pred CCccccCCeEEEEEEeC-CCCCCceEEEEeCCEEEEEeecCceEEEEeeccceEEEEEECCCCccccceEEEEeCCE-EE
Q 046366 49 DPFRETPTSHVITLDIP-RMKKDDVKIEVEENRVLREEVEGEKWHRAERPFDKVWRQFRMPMSADLDHVKAHLENGV-LR 126 (128)
Q Consensus 49 d~~~E~~~~~~i~~dlP-Gv~kedI~V~v~~~~l~i~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~I~A~~~nGv-L~ 126 (128)
-.|.++.+...|.+.|| |+++++|+|.+..+.+.+... +. .+ -...|...|+++....+.++|- |.
T Consensus 16 y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k-g~----------~~-l~g~L~~~I~~eeS~w~i~~~k~v~ 83 (157)
T 2rh0_A 16 GQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG-GR----------EI-LKGKLFDSTIADEGTWTLEDRKMVR 83 (157)
T ss_dssp EEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEET-TE----------EE-EEEEBSSCBCGGGCEEEEECCCEEE
T ss_pred EEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEEC-CE----------EE-EeeccccccCccccEEEEcCCcEEE
Confidence 45789999999999998 899999999999999988532 11 11 3467899999999999998874 66
Q ss_pred E
Q 046366 127 I 127 (128)
Q Consensus 127 I 127 (128)
|
T Consensus 84 I 84 (157)
T 2rh0_A 84 I 84 (157)
T ss_dssp E
T ss_pred E
Confidence 6
No 25
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=95.58 E-value=0.048 Score=36.76 Aligned_cols=69 Identities=12% Similarity=0.120 Sum_probs=53.3
Q ss_pred CccccCCeEEEEEEeCCCCCCceEEEEeCCEEEEEeecCceEEEEeeccceEEEEEECCCCccccceEEEEeCCEEEE
Q 046366 50 PFRETPTSHVITLDIPRMKKDDVKIEVEENRVLREEVEGEKWHRAERPFDKVWRQFRMPMSADLDHVKAHLENGVLRI 127 (128)
Q Consensus 50 ~~~E~~~~~~i~~dlPGv~kedI~V~v~~~~l~i~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~I~A~~~nGvL~I 127 (128)
.|.++.+...|.+.+|++ ++++|.++.+.+.+....+.. ...|.-.+.|-..|++++.+.+..++.+.|
T Consensus 7 ~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~-------~~~y~~~l~L~~~I~~e~S~~~v~~~kiei 75 (125)
T 1ejf_A 7 KWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGSD-------NFKHLNEIDLFHCIDPNDSKHKRTDRSILC 75 (125)
T ss_dssp EEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETTT-------TEEEEEEEEBSSCEEEEEEEEEECSSCEEE
T ss_pred eEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCCC-------CceEEEEEEccceeccccCEEEECCCEEEE
Confidence 477899999999999996 699999999988884321100 013677789999999999988887776665
No 26
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=94.75 E-value=0.023 Score=39.02 Aligned_cols=68 Identities=7% Similarity=0.043 Sum_probs=46.4
Q ss_pred CeEEEEEEeCCCCCCceEEEEeCCEEEEEeecCceEEEEeeccceEEEEEECCCCccccceEEEEeCCE-EEE
Q 046366 56 TSHVITLDIPRMKKDDVKIEVEENRVLREEVEGEKWHRAERPFDKVWRQFRMPMSADLDHVKAHLENGV-LRI 127 (128)
Q Consensus 56 ~~~~i~~dlPGv~kedI~V~v~~~~l~i~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~I~A~~~nGv-L~I 127 (128)
+...|.+.+|+++ +++|.+..+.|.+.......-.. .....|.-.+.|...|++++.+.++.++. +.|
T Consensus 23 ~~V~ltI~~~~~~--~~~V~~~~~~l~~~~~~~~~~g~--~~~~~y~~~l~L~~~Idpe~S~~~v~~~~~vei 91 (134)
T 2cg9_X 23 NYVLITVSIADCD--APELTIKPSYIELKAQSKPHVGD--ENVHHYQLHIDLYKEIIPEKTMHKVANGQHYFL 91 (134)
T ss_dssp SEEEEECCCSSEE--SCCCCBCSSEEEECCEEC---------CEEBCEEEECSSCCCSSSEEEEECCC--CEE
T ss_pred CEEEEEEEecCCC--ceEEEEECCEEEEEEecccccCC--ccCceEEEEEEChhhccccccEEEECCCEEEEE
Confidence 3499999999985 88888999988884221110000 00014667789999999999999998876 655
No 27
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=92.66 E-value=0.27 Score=34.27 Aligned_cols=67 Identities=6% Similarity=0.113 Sum_probs=49.8
Q ss_pred CccccCCeEEEEEEeCCCCCCceEEEEe-CCEEEEEeecCceEEEEeeccceEEEEEECCCCccccceEEEEeCCEEEE
Q 046366 50 PFRETPTSHVITLDIPRMKKDDVKIEVE-ENRVLREEVEGEKWHRAERPFDKVWRQFRMPMSADLDHVKAHLENGVLRI 127 (128)
Q Consensus 50 ~~~E~~~~~~i~~dlPGv~kedI~V~v~-~~~l~i~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~I~A~~~nGvL~I 127 (128)
.|.++++...|.+.+|++ ++++|+++ .+.+.+....... ..|.-.+.|-..|+++ .+.+..+.-+.|
T Consensus 8 ~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~~~~~--------~~y~~~l~L~~~Idpe-S~~~v~~~kIei 75 (150)
T 2kmw_A 8 LWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSALGAQG--------ERFEFSLELYGKIMTE-YRKNVGLRNIIF 75 (150)
T ss_dssp EEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEETTTT--------EEEEEEEEBSSCEEEE-EEEEEESSSEEE
T ss_pred EEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEEcCCC--------ceEEEEeEhhhccccc-ceEEecCCEEEE
Confidence 477999999999999998 47889988 6777774331111 1467778898999998 777776665554
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=87.68 E-value=0.92 Score=28.18 Aligned_cols=29 Identities=21% Similarity=0.314 Sum_probs=26.0
Q ss_pred ceEEEEEECCCCccccceEEEEeCCEEEEC
Q 046366 99 DKVWRQFRMPMSADLDHVKAHLENGVLRIT 128 (128)
Q Consensus 99 g~F~R~~~LP~~vd~~~I~A~~~nGvL~It 128 (128)
..|.-.+.|| +++.++|+-++++|.|+|+
T Consensus 7 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~ 35 (85)
T 3q9p_A 7 DRWRVSLDVN-HFAPDELTVKTKDGVVEIT 35 (85)
T ss_dssp CEEEEEEECT-TTCCSEEEEEEETTEEEEE
T ss_pred CEEEEEEECC-CCChHHEEEEEECCEEEEE
Confidence 3688899999 8999999999999999984
No 29
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=84.14 E-value=1.7 Score=27.16 Aligned_cols=28 Identities=7% Similarity=0.172 Sum_probs=25.5
Q ss_pred eEEEEEECCCCccccceEEEEeCCEEEEC
Q 046366 100 KVWRQFRMPMSADLDHVKAHLENGVLRIT 128 (128)
Q Consensus 100 ~F~R~~~LP~~vd~~~I~A~~~nGvL~It 128 (128)
.|.-.+.|| +++.++|+-++++|.|+|+
T Consensus 7 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~ 34 (90)
T 2y1y_A 7 RFSVNLDVK-HFSPEELKVKVLGDVIEVH 34 (90)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEE
Confidence 588899999 8999999999999999984
No 30
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=83.50 E-value=1.8 Score=27.35 Aligned_cols=29 Identities=17% Similarity=0.427 Sum_probs=25.8
Q ss_pred ceEEEEEECCCCccccceEEEEeCCEEEEC
Q 046366 99 DKVWRQFRMPMSADLDHVKAHLENGVLRIT 128 (128)
Q Consensus 99 g~F~R~~~LP~~vd~~~I~A~~~nGvL~It 128 (128)
..|.-.+.|| +++.++|+-++++|.|+|+
T Consensus 14 ~~~~v~~~lP-G~~~edi~v~~~~~~L~I~ 42 (100)
T 3gla_A 14 NHFVLYADLP-GIDPSQIEVQMDKGILSIR 42 (100)
T ss_dssp SEEEEEEECT-TSCGGGCEEEEETTEEEEE
T ss_pred CEEEEEEECC-CCCHHHEEEEEECCEEEEE
Confidence 3688889999 7999999999999999984
No 31
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=82.65 E-value=2.1 Score=27.60 Aligned_cols=29 Identities=10% Similarity=0.174 Sum_probs=26.0
Q ss_pred ceEEEEEECCCCccccceEEEEeCCEEEEC
Q 046366 99 DKVWRQFRMPMSADLDHVKAHLENGVLRIT 128 (128)
Q Consensus 99 g~F~R~~~LP~~vd~~~I~A~~~nGvL~It 128 (128)
..|.-.+.|| +++.++|+-++++|.|+|+
T Consensus 12 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~ 40 (106)
T 3l1e_A 12 DKFVIFLDVK-HFSPEDLTVKVQEDFVEIH 40 (106)
T ss_dssp SEEEEEEECT-TSCGGGEEEEEETTEEEEE
T ss_pred CEEEEEEECC-CCChHHEEEEEECCEEEEE
Confidence 3688899999 8999999999999999984
No 32
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=82.06 E-value=2.2 Score=27.29 Aligned_cols=28 Identities=0% Similarity=0.001 Sum_probs=25.5
Q ss_pred eEEEEEECCCCccccceEEEEeCCEEEEC
Q 046366 100 KVWRQFRMPMSADLDHVKAHLENGVLRIT 128 (128)
Q Consensus 100 ~F~R~~~LP~~vd~~~I~A~~~nGvL~It 128 (128)
.|.-.+.|| +++.++|+-++++|.|+|+
T Consensus 12 ~~~v~~dlP-G~~~edI~V~v~~~~L~I~ 39 (101)
T 2wj5_A 12 YFSVLLDVK-HFSPEEISVKVVGDHVEVH 39 (101)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEE
Confidence 588889999 8999999999999999984
No 33
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=81.05 E-value=2.4 Score=26.98 Aligned_cols=29 Identities=14% Similarity=0.247 Sum_probs=25.8
Q ss_pred ceEEEEEECCCCccccceEEEEeCCEEEEC
Q 046366 99 DKVWRQFRMPMSADLDHVKAHLENGVLRIT 128 (128)
Q Consensus 99 g~F~R~~~LP~~vd~~~I~A~~~nGvL~It 128 (128)
..|.-.+.|| +++.++|+-++++|.|+|+
T Consensus 16 ~~~~v~~~lP-G~~~edi~v~~~~~~L~I~ 44 (102)
T 4fei_A 16 THLDLLLDVP-GVDAGTLALAEDGGQLTVS 44 (102)
T ss_dssp TEEEEEEECT-TCCGGGCEEEEETTEEEEE
T ss_pred CEEEEEEECC-CCchHhEEEEEECCEEEEE
Confidence 3688889999 8999999999999999984
No 34
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=77.56 E-value=19 Score=26.64 Aligned_cols=68 Identities=10% Similarity=0.134 Sum_probs=45.6
Q ss_pred EEEEE---EeCCCCCCceEEEEe--CCEEEEEeecCceEEEEeeccceEEEEEECCCCccccceEEEEeCCEEEE
Q 046366 58 HVITL---DIPRMKKDDVKIEVE--ENRVLREEVEGEKWHRAERPFDKVWRQFRMPMSADLDHVKAHLENGVLRI 127 (128)
Q Consensus 58 ~~i~~---dlPGv~kedI~V~v~--~~~l~i~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~I~A~~~nGvL~I 127 (128)
|.+.+ .|||+..+==-+.++ +++|.+...+......-... |...|++++...-|.+.|... .+|.+.|
T Consensus 13 y~~~~~~~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~-~~g~~~v 85 (255)
T 3qqz_A 13 YHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYI-GDNQFVI 85 (255)
T ss_dssp CEEEEEEEECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEEC-STTEEEE
T ss_pred eEEEEeceECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEe-CCCEEEE
Confidence 44444 499998763346666 56777655555555555555 899999999876788888753 6665543
No 35
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=77.23 E-value=3.6 Score=28.37 Aligned_cols=28 Identities=11% Similarity=0.158 Sum_probs=25.1
Q ss_pred eEEEEEECCCCccccceEEEEeCCEEEEC
Q 046366 100 KVWRQFRMPMSADLDHVKAHLENGVLRIT 128 (128)
Q Consensus 100 ~F~R~~~LP~~vd~~~I~A~~~nGvL~It 128 (128)
.|.-.+.|| +++.++|+-++++|.|+|+
T Consensus 67 ~~~v~~dlP-G~~~edi~V~~~~~~L~I~ 94 (161)
T 4eld_A 67 HIKVIAWLP-GVNKEDIILNAVGDTLEIR 94 (161)
T ss_dssp EEEEEEECT-TCCGGGEEEEEETTEEEEE
T ss_pred EEEEEEECC-CCChHhEEEEEECCEEEEE
Confidence 577889998 7899999999999999984
No 36
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=76.22 E-value=4 Score=26.79 Aligned_cols=28 Identities=14% Similarity=0.137 Sum_probs=24.8
Q ss_pred eEEEEEECCCCccccceEEEEeC-CEEEEC
Q 046366 100 KVWRQFRMPMSADLDHVKAHLEN-GVLRIT 128 (128)
Q Consensus 100 ~F~R~~~LP~~vd~~~I~A~~~n-GvL~It 128 (128)
.|.-.+.|| +++.++|+-++++ |.|+|+
T Consensus 35 ~~~v~~~lP-G~~~edi~V~v~~~~~L~I~ 63 (123)
T 3aab_A 35 YLVVVADLA-GFNKEKIKARVSGQNELIIE 63 (123)
T ss_dssp EEEEEEECC-SCCGGGCEEEEETTTEEEEE
T ss_pred EEEEEEECC-CCCHHHEEEEEeCCCEEEEE
Confidence 577789999 7999999999999 999984
No 37
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=71.37 E-value=5 Score=28.39 Aligned_cols=28 Identities=7% Similarity=0.172 Sum_probs=25.5
Q ss_pred eEEEEEECCCCccccceEEEEeCCEEEEC
Q 046366 100 KVWRQFRMPMSADLDHVKAHLENGVLRIT 128 (128)
Q Consensus 100 ~F~R~~~LP~~vd~~~I~A~~~nGvL~It 128 (128)
.|.-.+.|| +++.++|+-++++|.|+|+
T Consensus 74 ~~~v~~dlP-G~~~edI~V~v~~~~L~I~ 101 (175)
T 2klr_A 74 RFSVNLDVK-HFSPEELKVKVLGDVIEVH 101 (175)
T ss_dssp EEEEEECCS-SCCGGGEEEEEETTEEEEE
T ss_pred eEEEEEECC-CCChHHEEEEEECCEEEEE
Confidence 588889998 8999999999999999984
No 38
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=63.65 E-value=9.1 Score=26.13 Aligned_cols=28 Identities=21% Similarity=0.316 Sum_probs=23.6
Q ss_pred eEEEEEECCCCccccceEEEEe-CCEEEEC
Q 046366 100 KVWRQFRMPMSADLDHVKAHLE-NGVLRIT 128 (128)
Q Consensus 100 ~F~R~~~LP~~vd~~~I~A~~~-nGvL~It 128 (128)
.|.-.+.|| +++.++|+-+++ ++.|+|+
T Consensus 54 ~~~v~~dlP-Gv~kedI~V~v~~~~~L~I~ 82 (151)
T 1gme_A 54 AHVFKADLP-GVKKEEVKVEVEDGNVLVVS 82 (151)
T ss_dssp EEEEEEECT-TCCGGGEEEEEETTTEEEEE
T ss_pred EEEEEEECC-CCChHHEEEEEecCCEEEEE
Confidence 477789999 899999999995 5799984
No 39
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=42.57 E-value=64 Score=20.52 Aligned_cols=17 Identities=18% Similarity=0.374 Sum_probs=13.9
Q ss_pred CCceEEEEeCCEEEEEe
Q 046366 69 KDDVKIEVEENRVLREE 85 (128)
Q Consensus 69 kedI~V~v~~~~l~i~~ 85 (128)
|+.|+|+++++.+.|+.
T Consensus 20 P~gV~V~i~~~~VtVKG 36 (100)
T 2cql_A 20 PENVDITLKGRTVIVKG 36 (100)
T ss_dssp CSSCEEEEETTEEEEEE
T ss_pred CCCCEEEEeCCEEEEEC
Confidence 57899999999888853
No 40
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=41.42 E-value=37 Score=25.44 Aligned_cols=41 Identities=2% Similarity=-0.010 Sum_probs=25.1
Q ss_pred CCCceEEEEeCCEEEEEee--cCceEE-EEeeccceEEEEEECCCC
Q 046366 68 KKDDVKIEVEENRVLREEV--EGEKWH-RAERPFDKVWRQFRMPMS 110 (128)
Q Consensus 68 ~kedI~V~v~~~~l~i~~~--~~~~~~-~~Er~~g~F~R~~~LP~~ 110 (128)
+++++.| ++|.|.|... .+.++. .....+|.|+-++++|.+
T Consensus 31 ~~~Nv~v--~~G~L~L~~~k~tsa~i~Sk~~~~yG~~Ear~Klp~g 74 (274)
T 2uwa_A 31 GPQHQRV--DQGSLTIWLDSTSGSGFKSINRYRSGYFGANIKLQSG 74 (274)
T ss_dssp CGGGEEE--ETTEEEEEECSSCCEEEEEEEEEEEEEEEEEEECCCS
T ss_pred CCCCEEE--ECCEEEEEEecCCCCEEEECceEeeEEEEEEEEeCCC
Confidence 4556665 5667766221 122222 345678999999999975
No 41
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=39.67 E-value=69 Score=22.72 Aligned_cols=42 Identities=24% Similarity=0.322 Sum_probs=25.5
Q ss_pred CCceEEEEeCCEEEEEeecCceEEEEeeccceEEEEEECCCCccccceEEEEeCCEEEE
Q 046366 69 KDDVKIEVEENRVLREEVEGEKWHRAERPFDKVWRQFRMPMSADLDHVKAHLENGVLRI 127 (128)
Q Consensus 69 kedI~V~v~~~~l~i~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~I~A~~~nGvL~I 127 (128)
|++++|+++++.+.++.. .|.-.|.|.-| .+ +-..++|.|+|
T Consensus 14 P~gV~v~i~~~~V~VkGp-----------kG~L~~~~~~~-~v-----~i~~~~~~l~v 55 (184)
T 3j21_F 14 PEGVEVTVEGYKVKVKGP-----------KGELEREFFWP-GI-----QIFTEDGNVVI 55 (184)
T ss_dssp CSSCEEEESSSEEEEECS-----------SCEEEEECCCT-TC-----EEEEETTEEEE
T ss_pred CCCcEEEEeCCEEEEEcC-----------CeEEEEEecCC-cE-----EEEEeCCEEEE
Confidence 578999999888877532 34455554322 22 33456676665
No 42
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=38.23 E-value=1e+02 Score=21.70 Aligned_cols=41 Identities=20% Similarity=0.246 Sum_probs=26.6
Q ss_pred CCceEEEEeCCEEEEEeecCceEEEEeeccceEEEEEECCCCccccceEEEEeCCEEEE
Q 046366 69 KDDVKIEVEENRVLREEVEGEKWHRAERPFDKVWRQFRMPMSADLDHVKAHLENGVLRI 127 (128)
Q Consensus 69 kedI~V~v~~~~l~i~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~I~A~~~nGvL~I 127 (128)
|+.|+|+++++.++++.. .|...+.| |..+ +...+||.|++
T Consensus 11 P~gV~V~i~~~~VtVkGp-----------kG~L~~~~--~~~v-----~i~~~~~~l~v 51 (177)
T 1rl6_A 11 PAGVTVTVNGNTVTVKGP-----------KGELTRTF--HPDM-----TITVEGNVITV 51 (177)
T ss_dssp CTTCEEEEETTEEEEEET-----------TEEEEEEC--CTTC-----EEEEETTEEEE
T ss_pred CCCCEEEEeCCEEEEECC-----------CeEEEEEc--CCCE-----EEEEeCCEEEE
Confidence 578899999988887532 34555544 4443 34467777765
No 43
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=35.16 E-value=1.2e+02 Score=22.12 Aligned_cols=41 Identities=5% Similarity=0.088 Sum_probs=25.0
Q ss_pred CCceEEEEeCCEEEEEeecCceEEEEeeccceEEEEEECCCCccccceEEEEeCCEEEE
Q 046366 69 KDDVKIEVEENRVLREEVEGEKWHRAERPFDKVWRQFRMPMSADLDHVKAHLENGVLRI 127 (128)
Q Consensus 69 kedI~V~v~~~~l~i~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~I~A~~~nGvL~I 127 (128)
|+.|+|+++++.++|+.. .|...+.| |.. ++...+||.|+|
T Consensus 39 P~gV~V~i~~~~VtVKGP-----------kG~L~~~~--~~~-----v~i~~e~~~i~v 79 (212)
T 1nkw_E 39 PSGVTVNAQDGVFKVKGP-----------KGELTVPY--NTE-----LTVRQDGDQLLV 79 (212)
T ss_pred CCCcEEEEeCCEEEEECC-----------CEEEEEEC--CCC-----eEEEEECCEEEE
Confidence 578889999988877532 33444444 433 334456776665
No 44
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=33.04 E-value=52 Score=21.59 Aligned_cols=28 Identities=18% Similarity=0.226 Sum_probs=21.0
Q ss_pred eEEEEEECCCCccccceEEEEeCCEEEE
Q 046366 100 KVWRQFRMPMSADLDHVKAHLENGVLRI 127 (128)
Q Consensus 100 ~F~R~~~LP~~vd~~~I~A~~~nGvL~I 127 (128)
...-+|.||.+++.+.+...++..-|+|
T Consensus 15 ~V~i~I~lp~~~~~kdv~V~i~~~~l~v 42 (131)
T 2o30_A 15 EINIQFPVTGDADSSAIKIRMVGKKICV 42 (131)
T ss_dssp EEEEEEECC---CCSCEEEEEETTEEEE
T ss_pred EEEEEEECCCCCCccceEEEEECCEEEE
Confidence 4667899999999999999998887776
No 45
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=31.73 E-value=1.2e+02 Score=21.25 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=26.0
Q ss_pred CCceEEEEeCCEEEEEeecCceEEEEeeccceEEEEEECCCCccccceEEEEeCCEEEE
Q 046366 69 KDDVKIEVEENRVLREEVEGEKWHRAERPFDKVWRQFRMPMSADLDHVKAHLENGVLRI 127 (128)
Q Consensus 69 kedI~V~v~~~~l~i~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~I~A~~~nGvL~I 127 (128)
|++|+|+++++.++++.. .|.-.|.| |..+ +-..+++.|+|
T Consensus 12 P~gV~v~i~~~~v~VkGp-----------kG~L~~~~--~~~v-----~i~~~~~~l~v 52 (180)
T 3v2d_H 12 PKGVSVEVAPGRVKVKGP-----------KGELEVPV--SPEM-----RVVVEEGVVRV 52 (180)
T ss_dssp CTTCEEEEETTEEEEECS-----------SCEEEEEC--CTTS-----EEEEETTEEEE
T ss_pred CCCcEEEEeCCEEEEEeC-----------CcEEEEEe--CCCE-----EEEEECCEEEE
Confidence 688999999988887532 34455544 4343 33456777765
No 46
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=30.65 E-value=1.4e+02 Score=20.99 Aligned_cols=42 Identities=17% Similarity=0.149 Sum_probs=26.1
Q ss_pred CCceEEEEeCCEEEEEeecCceEEEEeeccceEEEEEECCCCccccceEEEEeCCEEEE
Q 046366 69 KDDVKIEVEENRVLREEVEGEKWHRAERPFDKVWRQFRMPMSADLDHVKAHLENGVLRI 127 (128)
Q Consensus 69 kedI~V~v~~~~l~i~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~I~A~~~nGvL~I 127 (128)
|+.++|+++++.+.++.. .|.-.+.|. |..+ +...+||.|+|
T Consensus 9 P~gV~v~i~~~~vtVkGp-----------kG~L~~~~~-~~~v-----~i~~~~~~i~v 50 (178)
T 1vq8_E 9 PEDVDAEQDHLDITVEGD-----------NGSVTRRLW-YPDI-----DVSVDGDTVVI 50 (178)
T ss_dssp CTTCEEEEETTEEEEEET-----------TEEEEEECC-CTTC-----EEEEETTEEEE
T ss_pred CCCCEEEEeCCEEEEECC-----------CeEEEEEEE-CCeE-----EEEEECCEEEE
Confidence 578999999988887532 344555442 3333 34456777665
No 47
>3jx8_A Putative lipoprotein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.16A {Parabacteroides distasonis atcc 8503}
Probab=30.00 E-value=1e+02 Score=22.19 Aligned_cols=36 Identities=17% Similarity=0.046 Sum_probs=26.8
Q ss_pred ccC-CeEEEEEEeCCCCCCceEEEEeCCEEEEEeecC
Q 046366 53 ETP-TSHVITLDIPRMKKDDVKIEVEENRVLREEVEG 88 (128)
Q Consensus 53 E~~-~~~~i~~dlPGv~kedI~V~v~~~~l~i~~~~~ 88 (128)
..+ +++.|+++-|---.+.|+++++++.|.|...+.
T Consensus 37 ~qgd~~~~V~i~~~~nl~~~i~~~v~~g~L~I~~~~~ 73 (250)
T 3jx8_A 37 EQSDKAPYLSVTIDENLFDYLVTEVEGGTLKIYPKSI 73 (250)
T ss_dssp EECSSCCEEEEEEEGGGGGGEEEEEETTEEEEEECBC
T ss_pred EECCCCceEEEEECccccceEEEEEECCEEEEEEcCC
Confidence 444 567777777665568999999999999955444
No 48
>3pet_A Putative adhesin; right-handed beta-helix, structural genomics, joint center F structural genomics, JCSG; HET: PG4; 2.07A {Bacteroides fragilis nctc 9343}
Probab=28.34 E-value=51 Score=23.48 Aligned_cols=48 Identities=17% Similarity=0.194 Sum_probs=31.0
Q ss_pred eEEEEEEeCCCCCCceEEEEeCCEEEEEeecCceEEEEeeccceEEEEEECC
Q 046366 57 SHVITLDIPRMKKDDVKIEVEENRVLREEVEGEKWHRAERPFDKVWRQFRMP 108 (128)
Q Consensus 57 ~~~i~~dlPGv~kedI~V~v~~~~l~i~~~~~~~~~~~Er~~g~F~R~~~LP 108 (128)
.+.++++-+.---+.|+++++++.|.|...+...+ +......-.++.|
T Consensus 41 ~~~V~i~g~~nl~~~i~~~v~~g~L~I~~~~~~~~----~~~~~~~i~Vt~p 88 (221)
T 3pet_A 41 KTDLQIYGPDNIVALIQVAVKDNTLFLSIDKSKKV----RNFKKMKITITSP 88 (221)
T ss_dssp CCEEEEEEEHHHHTTEEEEEETTEEEEEECTTCCB----SCCTTCEEEEEES
T ss_pred cEEEEEEEChhhcceEEEEEECCEEEEEEcCCccc----CCCCeEEEEEEeC
Confidence 67777776544457899999999999965444332 2223455556666
No 49
>2hbp_A Cytoskeleton assembly control protein SLA1; SHD1, NPFX(1,2)D, endocytosis, protein binding; NMR {Saccharomyces cerevisiae}
Probab=25.24 E-value=28 Score=20.99 Aligned_cols=32 Identities=3% Similarity=0.101 Sum_probs=26.8
Q ss_pred CCccccCCeEEEEEEeCCCCCCceEEEEeCCE
Q 046366 49 DPFRETPTSHVITLDIPRMKKDDVKIEVEENR 80 (128)
Q Consensus 49 d~~~E~~~~~~i~~dlPGv~kedI~V~v~~~~ 80 (128)
..|.+..+.|.|++++=|++...|.+.-.||.
T Consensus 6 RtWtDrtG~F~VeA~flg~~dgki~LhK~nGv 37 (68)
T 2hbp_A 6 RLWVDRSGTFKVDAEFIGCAKGKIHLHKANGV 37 (68)
T ss_dssp EEEEBSSSCCEEEEEEEEEETTEEEEECTTSC
T ss_pred cEEEcCCCCeEEEEEEEEEeCCEEEEEecCCc
Confidence 35778889999999999999888888887763
No 50
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=24.89 E-value=71 Score=21.80 Aligned_cols=28 Identities=11% Similarity=0.335 Sum_probs=23.6
Q ss_pred eEEEEEECCCCccccceEEEEeCCEEEE
Q 046366 100 KVWRQFRMPMSADLDHVKAHLENGVLRI 127 (128)
Q Consensus 100 ~F~R~~~LP~~vd~~~I~A~~~nGvL~I 127 (128)
...-+|.||.+++.+.+...++..-|+|
T Consensus 24 eV~v~I~lp~~~~~kdv~V~i~~~~L~v 51 (157)
T 2rh0_A 24 EVFIEVQVPPGTRAQDIQCGLQSRHVAL 51 (157)
T ss_dssp EEEEEEECCTTCCGGGEEEEECSSEEEE
T ss_pred EEEEEEECCCCCcccceEEEEecCEEEE
Confidence 4566899999999999999998887776
No 51
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=23.33 E-value=55 Score=21.84 Aligned_cols=13 Identities=23% Similarity=0.511 Sum_probs=11.2
Q ss_pred eEEEEeCCEEEEC
Q 046366 116 VKAHLENGVLRIT 128 (128)
Q Consensus 116 I~A~~~nGvL~It 128 (128)
+.+.+.+|||+|+
T Consensus 49 ~Dve~~~gVLti~ 61 (123)
T 3oeq_A 49 PDVELSHGVMTLE 61 (123)
T ss_dssp CEEEECSSEEEEE
T ss_pred eEEEccCCEEEEE
Confidence 7888999999984
No 52
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=22.41 E-value=48 Score=22.25 Aligned_cols=15 Identities=20% Similarity=0.479 Sum_probs=12.4
Q ss_pred cceEEEEeCCEEEEC
Q 046366 114 DHVKAHLENGVLRIT 128 (128)
Q Consensus 114 ~~I~A~~~nGvL~It 128 (128)
..+.+.+.+|||+|+
T Consensus 40 ~d~D~e~~~gVLti~ 54 (129)
T 3t3l_A 40 EDYDVSFGSGVLTVK 54 (129)
T ss_dssp TTCEEEEETTEEEEE
T ss_pred cceeeecCCCEEEEE
Confidence 457888999999984
No 53
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=22.15 E-value=1e+02 Score=19.77 Aligned_cols=24 Identities=17% Similarity=0.199 Sum_probs=19.0
Q ss_pred ccceEEEEEECCCCccccceEEEEeCC
Q 046366 97 PFDKVWRQFRMPMSADLDHVKAHLENG 123 (128)
Q Consensus 97 ~~g~F~R~~~LP~~vd~~~I~A~~~nG 123 (128)
..|-|+.+|.+|.. ..+++.|.||
T Consensus 47 ~~Gw~~~TI~~~~~---~~l~~~F~dG 70 (102)
T 2c3v_A 47 XEGXVKVTIEAEEG---SQLRAAFNNG 70 (102)
T ss_dssp STTEEEEEECCCTT---CEEEEEEECS
T ss_pred cCCceEEEEecCCC---ceEEEEEeCC
Confidence 35668999999853 6889999887
No 54
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=21.93 E-value=1.7e+02 Score=18.93 Aligned_cols=33 Identities=18% Similarity=0.346 Sum_probs=25.6
Q ss_pred CccccCCeEEEEEEe-CCCCCCceEEEEeCCEEEE
Q 046366 50 PFRETPTSHVITLDI-PRMKKDDVKIEVEENRVLR 83 (128)
Q Consensus 50 ~~~E~~~~~~i~~dl-PGv~kedI~V~v~~~~l~i 83 (128)
.+++.++.+.+.+.+ ||.+++.| ..+.++.+.|
T Consensus 7 ~~~~~~~~v~l~v~V~P~A~r~~I-~g~~~~~LkV 40 (108)
T 1n91_A 7 AVTVNDDGLVLRLYIQPKASRDSI-VGLHGDEVKV 40 (108)
T ss_dssp SEEECSSEEEEEEEEECSSSSCEE-EEECSSCEEE
T ss_pred eEEECCCeEEEEEEEeeCCCccee-ecccCCEEEE
Confidence 456778888888876 89999887 4567788887
No 55
>1nvp_C Transcription initiation factor IIA beta chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: b.56.1.1
Probab=21.32 E-value=39 Score=20.77 Aligned_cols=16 Identities=25% Similarity=0.594 Sum_probs=12.5
Q ss_pred ccceEEEEeCCEEEEC
Q 046366 113 LDHVKAHLENGVLRIT 128 (128)
Q Consensus 113 ~~~I~A~~~nGvL~It 128 (128)
..+=++.++|||++|.
T Consensus 46 KnkWKc~LKdGim~in 61 (76)
T 1nvp_C 46 KNKWKFHLKDGIMNLN 61 (76)
T ss_dssp TTEEEEEEEEEEEEET
T ss_pred CceEEEEEeccEEEEC
Confidence 3456889999999873
No 56
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=20.76 E-value=72 Score=23.45 Aligned_cols=17 Identities=18% Similarity=0.251 Sum_probs=13.1
Q ss_pred CCceEEEEeCCEEEEEe
Q 046366 69 KDDVKIEVEENRVLREE 85 (128)
Q Consensus 69 kedI~V~v~~~~l~i~~ 85 (128)
|++|+|+++++.+.|+.
T Consensus 54 P~gV~V~i~~~~VtVKG 70 (223)
T 3bbo_I 54 PSNVTIALEGQDLKVKG 70 (223)
T ss_dssp STTSCEEESSSEEEECC
T ss_pred CCCCEEEEeCCEEEEEC
Confidence 57888999888777753
No 57
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=20.12 E-value=2.4e+02 Score=19.96 Aligned_cols=17 Identities=24% Similarity=0.307 Sum_probs=13.9
Q ss_pred CCceEEEEeCCEEEEEe
Q 046366 69 KDDVKIEVEENRVLREE 85 (128)
Q Consensus 69 kedI~V~v~~~~l~i~~ 85 (128)
|++++|+++++.+.++.
T Consensus 13 P~gV~v~i~~~~V~VkG 29 (190)
T 3iz5_F 13 PEGVTVQVAAKVVTVEG 29 (190)
T ss_dssp CTTCEEEEETTEEEEEE
T ss_pred CCCCEEEEeCCEEEEEC
Confidence 58899999998888753
Done!