BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>046367
GRLAPGLRSFHVGGPPEASTEANVSHGKEKQASVELPLHWSEWQLLDSILPTGGFAHSFG
LEAAIQARLISSPDDLRTYVIHILENTGSLLLPFVCTATTSPDLETWHKLDRMLDATLTN
EVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNFGDVAFHHAPLFGIICGLLGLHR
GTSQRAYMFITLRDIISAATRLNLVGPLGAAVLQHQIAFVAEAMLKKWKDRAVEEACQTS
PLLDTVQGCHAYLFSRLFCS

High Scoring Gene Products

Symbol, full name Information P value
UREF
urease accessory protein F
protein from Arabidopsis thaliana 1.1e-87

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046367
        (260 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2036997 - symbol:UREF "urease accessory protei...   876  1.1e-87   1
POMBASE|SPAC29A4.13 - symbol:SPAC29A4.13 "urease accessor...   170  2.5e-12   1


>TAIR|locus:2036997 [details] [associations]
            symbol:UREF "urease accessory protein F" species:3702
            "Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0006807 "nitrogen compound metabolic process" evidence=IEA;IMP]
            [GO:0016151 "nickel cation binding" evidence=IEA] [GO:0048554
            "positive regulation of metalloenzyme activity" evidence=IMP]
            [GO:0006661 "phosphatidylinositol biosynthetic process"
            evidence=RCA] InterPro:IPR002639 Pfam:PF01730 PIRSF:PIRSF009467
            EMBL:CP002684 GO:GO:0006807 GO:GO:0016151 GO:GO:0048554
            EMBL:AC013482 EMBL:AC007727 eggNOG:COG0830 EMBL:BT012628
            EMBL:AK175196 IPI:IPI00525430 RefSeq:NP_173602.1 UniGene:At.49902
            ProteinModelPortal:Q9XHZ3 IntAct:Q9XHZ3 STRING:Q9XHZ3 DNASU:838786
            EnsemblPlants:AT1G21840.1 GeneID:838786 KEGG:ath:AT1G21840
            TAIR:At1g21840 HOGENOM:HOG000049666 InParanoid:Q9XHZ3 OMA:FHHAPIF
            PhylomeDB:Q9XHZ3 ProtClustDB:CLSN2679757 ArrayExpress:Q9XHZ3
            Genevestigator:Q9XHZ3 Uniprot:Q9XHZ3
        Length = 240

 Score = 876 (313.4 bits), Expect = 1.1e-87, P = 1.1e-87
 Identities = 159/223 (71%), Positives = 194/223 (86%)

Query:    38 LHWSEWQLLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTYVIHILENTGSLLLPFVCT 97
             + WS+WQLLDSILPTGGFAHSFGLEAAIQ RL+SSP+DL T++IH+L+NT SLLLPFV +
Sbjct:    18 MQWSQWQLLDSILPTGGFAHSFGLEAAIQTRLVSSPEDLETHIIHVLDNTASLLLPFVYS 77

Query:    98 ATTSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLN 157
             A  SPD+ETWHKLD +L+ATLTN+VS KAS +QGSAL R+AASVFTEVP+LK +R+ SL 
Sbjct:    78 ALKSPDIETWHKLDGILNATLTNQVSSKASMSQGSALFRIAASVFTEVPNLKMIRDASLG 137

Query:   158 FGDVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPLGAAVLQHQI 217
               +V FHHAP+FG++CGLLG+   TSQRAY+F+TLRD++SAATRLN+VGP+GA+V+QH+I
Sbjct:   138 SKNVCFHHAPIFGLVCGLLGMDSETSQRAYLFVTLRDVLSAATRLNIVGPMGASVMQHRI 197

Query:   218 AFVAEAMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
             A V E +L+KW +R   EACQTSPLLD VQGCH YLFSRLFCS
Sbjct:   198 AIVTETVLEKWMNREAGEACQTSPLLDVVQGCHGYLFSRLFCS 240


>POMBASE|SPAC29A4.13 [details] [associations]
            symbol:SPAC29A4.13 "urease accessory protein UreF
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
            "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0016151 "nickel cation binding" evidence=IEA] [GO:0019627 "urea
            metabolic process" evidence=ISM] InterPro:IPR002639 Pfam:PF01730
            PIRSF:PIRSF009467 PomBase:SPAC29A4.13 GO:GO:0005737 EMBL:CU329670
            GO:GO:0005730 GO:GO:0016151 GO:GO:0019627 eggNOG:COG0830 KO:K03188
            PIR:T38476 RefSeq:NP_594869.1 STRING:O14016
            EnsemblFungi:SPAC29A4.13.1 GeneID:2542355 KEGG:spo:SPAC29A4.13
            OMA:DNDLDAS OrthoDB:EOG41RT4N NextBio:20803415 Uniprot:O14016
        Length = 235

 Score = 170 (64.9 bits), Expect = 2.5e-12, P = 2.5e-12
 Identities = 62/229 (27%), Positives = 109/229 (47%)

Query:    45 LLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTYVIHILENTGSLLLPFVCTATTSPDL 104
             L D+  P   F++S+GLE+ +  + +   +    ++   L +     LP V  A  SP  
Sbjct:    14 LSDTAFPLSSFSYSYGLESYLSHQQVRDVNAFFNFLPLSLNSVLHTNLPTVKAAWESP-- 71

Query:   105 ETWHKLDRMLDATLTNEVSRKASTAQGSALLRV---AASVF-TEVPSLKKMREISLNF-G 159
             + + +++   ++T T  +++K ST QG +LL +   + S F T     K + E       
Sbjct:    72 QQYSEIEDFFESTQTCTIAQKVSTMQGKSLLNIWTKSLSFFVTSTDVFKYLDEYERRVRS 131

Query:   160 DVAFHHAPL-FGIICGLLGLHRGTSQRAYMFIT--LRDIISAATRLNLVGPLG-AAVLQH 215
               A  H P+ +G++C  LGL     +  Y+F+    + I SAA RL+++      + L H
Sbjct:   132 KKALGHFPVVWGVVCRALGL--SLERTCYLFLLGHAKSICSAAVRLDVLTSFQYVSTLAH 189

Query:   216 QIAFVAEAMLKKWKDRAV----EEACQTSPLLDTVQGCHAYLFSRLFCS 260
                   E++L+     A+    E+  Q+   LD  QG H+ L+SR+F S
Sbjct:   190 P---QTESLLRDSSQLALNMQLEDTAQSWYTLDLWQGRHSLLYSRIFNS 235


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.134   0.405    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      260       260   0.00089  114 3  11 22  0.43    33
                                                     32  0.49    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  614 (65 KB)
  Total size of DFA:  195 KB (2109 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.00u 0.13s 22.13t   Elapsed:  00:00:01
  Total cpu time:  22.00u 0.13s 22.13t   Elapsed:  00:00:01
  Start:  Sat May 11 08:39:44 2013   End:  Sat May 11 08:39:45 2013

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