BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046367
(260 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B7K911|UREF_CYAP7 Urease accessory protein UreF OS=Cyanothece sp. (strain PCC 7424)
GN=ureF PE=3 SV=1
Length = 232
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 10/224 (4%)
Query: 43 WQLLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTYVIHILEN----TGSLLLPFVCTA 98
QL DS P+G F S GLEA Q I S DL ++ +L N T + L
Sbjct: 13 MQLSDSFFPSGSFTLSHGLEALAQGEQIHSIKDLEIFLQILLHNKLGTTDLVALIHAYRG 72
Query: 99 TTSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVF--TEVPSLKKMREISL 156
+ DL+ + D L A E +R+ G ALL VA + T++ +L+K
Sbjct: 73 SKREDLDAVREADHQLFAQTLIEKNREMGRKSGRALLMVARETWQDTQLETLEK----ET 128
Query: 157 NFGDVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPLGAAVLQHQ 216
G + H +F ++ + GL + A++ + ++ AA RLN++G L A + +
Sbjct: 129 AKGTINGLHPIIFAVVGRVAGLSETDTGLAFLHSFITGLLGAAIRLNIIGHLQAQKILLK 188
Query: 217 IAFVAEAMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
+A E +K + + E +PL+D Q H L RLF +
Sbjct: 189 LAPDLETTYQKATEINLNEMFSCTPLIDIAQMNHQNLDYRLFAN 232
>sp|Q117Z4|UREF_TRIEI Urease accessory protein UreF OS=Trichodesmium erythraeum (strain
IMS101) GN=ureF PE=3 SV=1
Length = 232
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 10/223 (4%)
Query: 44 QLLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTYVIHILEN----TGSLLLPFVCTAT 99
QL DS PTG F S GLE +Q I S ++ ++ +L N + + L
Sbjct: 14 QLSDSFFPTGSFTFSHGLETLVQTGKIQSQPEILYFLQILLRNKVGVSDVVALIHSYRGC 73
Query: 100 TSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNF- 158
+ D+E DRML +R+ G ALL VA+S + + ++++ ++++
Sbjct: 74 KNGDIEAVRVADRMLFVQTAIAKNRETQRQSGRALLMVASSTWQD----ERLKTLNIDAV 129
Query: 159 -GDVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPLGAAVLQHQI 217
G++ H +FG + ++GL + A++ + +I+ AA RL ++G + A + Q+
Sbjct: 130 SGNIHCLHPVIFGAVTSVVGLDERNAVLAFLHGLVTNILGAAIRLGILGHIQAQQILLQL 189
Query: 218 AFVAEAMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
EA+ +E+ +P +D Q H L +LF +
Sbjct: 190 VPDIEAVWSTAVSMNLEQMWSCTPFIDIAQMQHPKLAHKLFAN 232
>sp|A0JRH6|UREF_ARTS2 Urease accessory protein UreF OS=Arthrobacter sp. (strain FB24)
GN=ureF PE=3 SV=1
Length = 225
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 44 QLLDSILPTGGFAHSFGLEAAIQARLISSPDD----LRTYVIHILENTGSLLLPFVCTAT 99
QL DS LPTG FAHS G E I+ L+ L +V L + L + F+
Sbjct: 13 QLTDSALPTGAFAHSLGFETYIERGLVHDEASFGVWLSAFVGQQLSYSDGLAIRFLYEGV 72
Query: 100 TSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNFG 159
++ +LD +L A L R+AST G+ LL + VF P L + R + + G
Sbjct: 73 ------SFAELDALLTAQLLPRQLREASTKMGTRLLEIGTEVFPS-PELAEYRAL-VGAG 124
Query: 160 DVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPLGAAVLQHQIAF 219
A H F ++ LG+ S AY+F + + A R +G L + +
Sbjct: 125 RAAGHQPLAFAVVARSLGVPLTESLAAYLFAAVTSLTQNAVRAIPLGQNAGQRLLRKASD 184
Query: 220 VAEAMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
A +++ A ++ SP L+ Q H +R+F S
Sbjct: 185 DVAAAVERIGRLAPDDFGAVSPGLEISQMRHERQRARMFMS 225
>sp|A9KJR7|UREF_CLOPH Urease accessory protein UreF OS=Clostridium phytofermentans
(strain ATCC 700394 / DSM 18823 / ISDg) GN=ureF PE=3
SV=1
Length = 228
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 9/186 (4%)
Query: 44 QLLDSILPTGGFAHSFGLEAAIQARLISSPDDL----RTYVIHILENTGSLLLPFVCTAT 99
QL DS PTG F+HSFGLE IQ +I + + + Y+ L + L A
Sbjct: 10 QLCDSTFPTGAFSHSFGLETYIQDGIIFNKETFSKWNKAYIKEQLVYSDGLACRLAYEAL 69
Query: 100 TSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNFG 159
+ D++T LD ML A + SR+ S G LL + ++ PS + +
Sbjct: 70 ENNDMDTIWMLDGMLRAQILARESREGSRIIGERLLTLGNQLY---PSSRLTSYVDRIAK 126
Query: 160 DVAFHH-APLFGIICGLLGLHRGTSQRAYMFITLRDIISAATR-LNLVGPLGAAVLQHQI 217
V++ H A F +I L + + T+ +Y+F + +++ A R + L G +++
Sbjct: 127 GVSYGHPAIAFALISHSLSIPKNTTVMSYLFSSNANLVQNAVRGIPLGQTQGQQLIKESQ 186
Query: 218 AFVAEA 223
F+A+A
Sbjct: 187 DFIADA 192
>sp|O14016|UREF_SCHPO Uncharacterized urease accessory protein UreF-like
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC29A4.13 PE=3 SV=1
Length = 235
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 45 LLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTYVIHILENTGSLLLPFVCTATTSPDL 104
L D+ P F++S+GLE+ + + + + ++ L + LP V A SP
Sbjct: 14 LSDTAFPLSSFSYSYGLESYLSHQQVRDVNAFFNFLPLSLNSVLHTNLPTVKAAWESP-- 71
Query: 105 ETWHKLDRMLDATLTNEVSRKASTAQGSALLRV---AASVF-TEVPSLKKMREISLNF-G 159
+ + +++ ++T T +++K ST QG +LL + + S F T K + E
Sbjct: 72 QQYSEIEDFFESTQTCTIAQKVSTMQGKSLLNIWTKSLSFFVTSTDVFKYLDEYERRVRS 131
Query: 160 DVAFHHAPL-FGIICGLLGLHRGTSQRAYMFIT--LRDIISAATRLNLVGPLG-AAVLQH 215
A H P+ +G++C LGL + Y+F+ + I SAA RL+++ + L H
Sbjct: 132 KKALGHFPVVWGVVCRALGL--SLERTCYLFLLGHAKSICSAAVRLDVLTSFQYVSTLAH 189
Query: 216 QIAFVAEAMLKKWKDRA----VEEACQTSPLLDTVQGCHAYLFSRLFCS 260
E++L+ A +E+ Q+ LD QG H+ L+SR+F S
Sbjct: 190 P---QTESLLRDSSQLALNMQLEDTAQSWYTLDLWQGRHSLLYSRIFNS 235
>sp|B2HSZ3|UREF_MYCMM Urease accessory protein UreF OS=Mycobacterium marinum (strain ATCC
BAA-535 / M) GN=ureF PE=3 SV=1
Length = 211
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 98/218 (44%), Gaps = 18/218 (8%)
Query: 45 LLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTYVIHILENTGSLLLPFVCTATTSPDL 104
L DS LPTG HS G+E AI A L+++ L ++ + + G L+ + A DL
Sbjct: 10 LADSRLPTGAHVHSGGVEEAITAGLVTNLSSLEAFLKRRIRSHG-LVTASIAAAVQRGDL 68
Query: 105 ETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEV--PSLKKMREISLNFGDVA 162
DR DA + +R AS +QG L+R+A +++ E +L +++ G V
Sbjct: 69 AP-DGADRETDARTPSPAARDASRSQGRGLVRLARAIWPEADWDALGAKPHLAVAAGRV- 126
Query: 163 FHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPLGAAVLQHQIAFVAE 222
G + GL H ++ T+ +AA RL + P AVL Q+ +E
Sbjct: 127 -------GALAGLTPEHLALQ---LVYTTMTGSATAAQRLLALDPTDVAVLTFQL---SE 173
Query: 223 AMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
+ A+ A + PLLDT+ HA LF S
Sbjct: 174 LCTTTAAEAAIGLADLSDPLLDTLAQHHAERERPLFAS 211
>sp|Q07402|UREF_BACSB Urease accessory protein UreF OS=Bacillus sp. (strain TB-90)
GN=ureF PE=3 SV=1
Length = 227
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 98/227 (43%), Gaps = 12/227 (5%)
Query: 41 SEWQLLDSILPTGGFAHSFGLEAAIQARLISSPDDLRT----YVIHILENTGSLLLPFVC 96
S +QL DS P+G F+HSFGLE IQ ++I+ + + Y+ L T L
Sbjct: 6 SLFQLCDSNFPSGSFSHSFGLETYIQEKVITDKESFKNAISVYIRKQLFFTEGLACILAY 65
Query: 97 TATTSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTE---VPSLKKMRE 153
A + +LD +L A+ + +R + G + ++ ++ + +++E
Sbjct: 66 EAMEKNEPSALVELDHILFASNVAQETRSGNQRMGERMAKLCVDLYPSPILIEYTNRIKE 125
Query: 154 ISLNFGDVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPLGAAVL 213
+G H A +F I+ L + + T+ AY+F + ++ A R +G +
Sbjct: 126 -KKAYG----HSAIVFAIVAYHLKVTKETAVGAYLFANVSALVQNAVRGIPIGQTDGQRI 180
Query: 214 QHQIAFVAEAMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
+I + E ++ E+ SP ++ Q H L RLF S
Sbjct: 181 LVEIQPLLEEGVRTISQLPKEDLGAVSPGMEIAQMRHERLNVRLFMS 227
>sp|A1R1C7|UREF_ARTAT Urease accessory protein UreF OS=Arthrobacter aurescens (strain
TC1) GN=ureF PE=3 SV=1
Length = 223
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 69/163 (42%), Gaps = 14/163 (8%)
Query: 44 QLLDSILPTGGFAHSFGLEAAIQARLISSPDD----LRTYVIHILENTGSLLLPFVCTAT 99
QL DS LPTG FAHS G E+ I L+ L+ +V L + L L F+
Sbjct: 11 QLTDSALPTGAFAHSLGFESYIHRGLVRDESTFSTWLQAFVSQQLSYSDGLALRFLFEGV 70
Query: 100 TSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNFG 159
LD +L A L R+AS G LL + VF PS + L
Sbjct: 71 DVG------LLDGVLSAQLLAREVREASLKMGGRLLEIGGEVF---PSAELEAYRGLVRA 121
Query: 160 DVAFHHAPL-FGIICGLLGLHRGTSQRAYMFITLRDIISAATR 201
A H PL FG+I LG+ + AY+F T+ + A R
Sbjct: 122 GSASGHQPLAFGVIARSLGVPLEEALSAYLFATVTSLTQNAVR 164
>sp|B9DLW9|UREF_STACT Urease accessory protein UreF OS=Staphylococcus carnosus (strain
TM300) GN=ureF PE=3 SV=1
Length = 229
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 91/227 (40%), Gaps = 16/227 (7%)
Query: 43 WQLLDSILPTGGFAHSFGLEAAIQARLISSPDD----LRTYVIHILENTGSLLLPFVCTA 98
+Q DS PTG F+HSFGLE IQ + + LR ++ L L + V A
Sbjct: 10 FQFCDSQFPTGAFSHSFGLETYIQRGTVHDEESFKEWLRLFLSEQLTYADGLAIRLVYEA 69
Query: 99 TTSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNF 158
D E LDRML +R + G+ ++++A ++ + E N
Sbjct: 70 LNQNDPEKILHLDRMLFVQNMPRETRTGTKQMGTRMVKLANELYD--SEWIQWYEAQYNE 127
Query: 159 GDVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPL-GAAVLQHQI 217
+ H A F ++ LG+ Y++ + + A R +G G V+ I
Sbjct: 128 KNAKLHPAICFTMLGHFLGIDIEMIIDYYLYQNVSALTQNAVRAIPLGQTAGQRVVTDMI 187
Query: 218 AFVAEAMLKKWKDRAVE----EACQTSPLLDTVQGCHAYLFSRLFCS 260
F +K +D E E T+P L+ Q H + R+F S
Sbjct: 188 TF-----MKTTRDHIFELAESEFGITAPGLEINQMEHENVNVRIFIS 229
>sp|Q4A0J7|UREF_STAS1 Urease accessory protein UreF OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=ureF PE=3 SV=1
Length = 229
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 97/230 (42%), Gaps = 14/230 (6%)
Query: 39 HWSEWQLLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTYVIHILEN----TGSLLLPF 94
H +Q DS PTG F+HSFGLE IQ + + + +++ L L +
Sbjct: 6 HLRLFQFCDSQFPTGAFSHSFGLETYIQRDTVHDEESFQQWLVLFLNEQLTYADGLTMRL 65
Query: 95 VCTATTSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREI 154
V A D + KLDR+L + +R+ S G+ ++++A+ ++
Sbjct: 66 VYDALNENDTKAILKLDRILFVQNLPKETRQGSKQMGNRMVKLASELYD--SDWINWYHA 123
Query: 155 SLNFGDVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPLGAAVLQ 214
+ + H A F ++ LG+ T Y++ + + A R PLG Q
Sbjct: 124 QMKDKKASLHPAICFTMLGHHLGVDIETIIDYYLYQNVSSLTQNAVR---AIPLGQTAGQ 180
Query: 215 HQIAFVAEAMLKKWKDRAVE-EACQ---TSPLLDTVQGCHAYLFSRLFCS 260
+I ++K+ +D + A Q T+P L+ Q H + R+F S
Sbjct: 181 -RIVHKMIPIMKETRDHIMTIPASQLGITAPGLEINQMEHENVNVRIFIS 229
>sp|A4QA25|UREF_CORGB Urease accessory protein UreF OS=Corynebacterium glutamicum (strain
R) GN=ureF PE=3 SV=1
Length = 226
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 19/226 (8%)
Query: 44 QLLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTYVIHILE----NTGSLLLPFVCTAT 99
L DS LPTG FAHSFG E + A I++ ++ + ++ +L+ ++ +L +
Sbjct: 11 HLSDSALPTGAFAHSFGFETYMDAERITNAEEFQDWLKVLLKVQLTSSDALAMRMFYATP 70
Query: 100 TSPDLETWHKLD-RMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNF 158
T+ +L+ +LD R+ T EV R+A+ G+ + + A ++ VP + + E+ N
Sbjct: 71 TASELK---RLDERLFAGTPAREV-REANARMGTRMAEIVAETYS-VPLIIEYLELIKN- 124
Query: 159 GDVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVG-PLGAAVLQHQI 217
+++ H A + +G+ + A++ T+ +I A R G PLG Q +
Sbjct: 125 RELSGHPALALALATHSMGIDVDRAIHAHLTATVSSLIQNAVR----GIPLGQMAGQRVM 180
Query: 218 AFVAEAMLKKWKDRAVEEA---CQTSPLLDTVQGCHAYLFSRLFCS 260
+ E + K A+ +A C P LD Q H +RLF S
Sbjct: 181 FAMREHIGAAVKRSAMLDAIDFCSGDPGLDISQMVHETQRARLFMS 226
>sp|Q6GEE2|UREF_STAAR Urease accessory protein UreF OS=Staphylococcus aureus (strain
MRSA252) GN=ureF PE=3 SV=1
Length = 229
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 12/229 (5%)
Query: 39 HWSEWQLLDSILPTGGFAHSFGLEAAIQARLISSPDD------LRTYVIHILENTGSLLL 92
H +Q DS PTG F+HSFGLE IQ +I DD L+ ++ L + L +
Sbjct: 6 HLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIH--DDHTFIAWLKMFLQEQLTYSDGLAM 63
Query: 93 PFVCTATTSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMR 152
V A + D + +D+++ + +R + G+ ++++A ++ P +
Sbjct: 64 RLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMGTRMVKLALELYNN-PWIAWYH 122
Query: 153 EISLNFGDVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPL-GAA 211
+ + + A F ++ LG+ T Y++ + + A R +G G
Sbjct: 123 Q-QMQDKKAKLNPAICFTMLGHYLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTAGQK 181
Query: 212 VLQHQIAFVAEAMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
++ H I ++ E + ++ + + T+P L+ Q H + R+F S
Sbjct: 182 IVTHMIPYIEETRKQIFELKEADFGM-TAPGLELNQMAHENVNVRIFIS 229
>sp|Q2YYS9|UREF_STAAB Urease accessory protein UreF OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=ureF PE=3 SV=1
Length = 229
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 12/229 (5%)
Query: 39 HWSEWQLLDSILPTGGFAHSFGLEAAIQARLISSPDD------LRTYVIHILENTGSLLL 92
H +Q DS PTG F+HSFGLE IQ +I DD L+ ++ L + L +
Sbjct: 6 HLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIH--DDHTFIAWLKMFLQEQLTYSDGLAM 63
Query: 93 PFVCTATTSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMR 152
V A + D + +D+++ + +R + G+ ++++A ++ P +
Sbjct: 64 RLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMGTRIVKLALELYNS-PWIAWYH 122
Query: 153 EISLNFGDVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPL-GAA 211
+ + + A F ++ LG+ T Y++ + + A R +G G
Sbjct: 123 Q-QMQDKKAKLNPAICFTMLGHYLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTAGQK 181
Query: 212 VLQHQIAFVAEAMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
++ H I ++ E + ++ + + T+P L+ Q H + R+F S
Sbjct: 182 IVTHMIPYIEETRKQIFELKEADFGM-TAPGLELNQMAHENVNVRIFIS 229
>sp|P42876|UREF_STAXY Urease accessory protein UreF (Fragment) OS=Staphylococcus xylosus
GN=ureF PE=3 SV=1
Length = 189
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 39 HWSEWQLLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTYVIHILEN----TGSLLLPF 94
H +Q DS PTG F+HSFGLE IQ ++ + ++I L L +
Sbjct: 6 HLRLFQFCDSQFPTGAFSHSFGLETYIQRDIVHDEQSFQQWLILFLNEQLTYADGLTMRL 65
Query: 95 VCTATTSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVF 142
V A D + +LDR+L + +R+ S G+ ++++A+ ++
Sbjct: 66 VYNALEQDDAQAILRLDRILFVQNLPKETRQGSKQMGNRMVKLASELY 113
>sp|Q7A428|UREF_STAAN Urease accessory protein UreF OS=Staphylococcus aureus (strain
N315) GN=ureF PE=3 SV=1
Length = 229
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 12/229 (5%)
Query: 39 HWSEWQLLDSILPTGGFAHSFGLEAAIQARLISSPDD------LRTYVIHILENTGSLLL 92
H +Q DS PTG F+HSFGLE IQ +I DD L+ ++ L + L +
Sbjct: 6 HLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIH--DDHTFIAWLKMFLQEQLTYSDGLAM 63
Query: 93 PFVCTATTSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMR 152
V A + D + +D+++ + +R + G+ ++++A ++ P +
Sbjct: 64 RLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMGTRMVKLALELYNS-PWIAWYH 122
Query: 153 EISLNFGDVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPL-GAA 211
+ + + A F ++ LG+ T Y++ + + A R +G G
Sbjct: 123 Q-QMQDKKAKLNPAICFTMLGHHLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTAGQK 181
Query: 212 VLQHQIAFVAEAMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
++ H I ++ E + ++ + + T+P L+ Q H + R+F S
Sbjct: 182 IVTHMIPYIEETRKQIFELKEADFGM-TAPGLELNQMAHENVNVRIFIS 229
>sp|Q99RY0|UREF_STAAM Urease accessory protein UreF OS=Staphylococcus aureus (strain Mu50
/ ATCC 700699) GN=ureF PE=3 SV=1
Length = 229
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 12/229 (5%)
Query: 39 HWSEWQLLDSILPTGGFAHSFGLEAAIQARLISSPDD------LRTYVIHILENTGSLLL 92
H +Q DS PTG F+HSFGLE IQ +I DD L+ ++ L + L +
Sbjct: 6 HLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIH--DDHTFIAWLKMFLQEQLTYSDGLAM 63
Query: 93 PFVCTATTSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMR 152
V A + D + +D+++ + +R + G+ ++++A ++ P +
Sbjct: 64 RLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMGTRMVKLALELYNS-PWIAWYH 122
Query: 153 EISLNFGDVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPL-GAA 211
+ + + A F ++ LG+ T Y++ + + A R +G G
Sbjct: 123 Q-QMQDKKAKLNPAICFTMLGHHLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTAGQK 181
Query: 212 VLQHQIAFVAEAMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
++ H I ++ E + ++ + + T+P L+ Q H + R+F S
Sbjct: 182 IVTHMIPYIEETRKQIFELKEADFGM-TAPGLELNQMAHENVNVRIFIS 229
>sp|A5IV73|UREF_STAA9 Urease accessory protein UreF OS=Staphylococcus aureus (strain JH9)
GN=ureF PE=3 SV=1
Length = 229
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 12/229 (5%)
Query: 39 HWSEWQLLDSILPTGGFAHSFGLEAAIQARLISSPDD------LRTYVIHILENTGSLLL 92
H +Q DS PTG F+HSFGLE IQ +I DD L+ ++ L + L +
Sbjct: 6 HLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIH--DDHTFIAWLKMFLQEQLTYSDGLAM 63
Query: 93 PFVCTATTSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMR 152
V A + D + +D+++ + +R + G+ ++++A ++ P +
Sbjct: 64 RLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMGTRMVKLALELYNS-PWIAWYH 122
Query: 153 EISLNFGDVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPL-GAA 211
+ + + A F ++ LG+ T Y++ + + A R +G G
Sbjct: 123 Q-QMQDKKAKLNPAICFTMLGHHLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTAGQK 181
Query: 212 VLQHQIAFVAEAMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
++ H I ++ E + ++ + + T+P L+ Q H + R+F S
Sbjct: 182 IVTHMIPYIEETRKQIFELKEADFGM-TAPGLELNQMAHENVNVRIFIS 229
>sp|A6U416|UREF_STAA2 Urease accessory protein UreF OS=Staphylococcus aureus (strain JH1)
GN=ureF PE=3 SV=1
Length = 229
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 12/229 (5%)
Query: 39 HWSEWQLLDSILPTGGFAHSFGLEAAIQARLISSPDD------LRTYVIHILENTGSLLL 92
H +Q DS PTG F+HSFGLE IQ +I DD L+ ++ L + L +
Sbjct: 6 HLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIH--DDHTFIAWLKMFLQEQLTYSDGLAM 63
Query: 93 PFVCTATTSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMR 152
V A + D + +D+++ + +R + G+ ++++A ++ P +
Sbjct: 64 RLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMGTRMVKLALELYNS-PWIAWYH 122
Query: 153 EISLNFGDVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPL-GAA 211
+ + + A F ++ LG+ T Y++ + + A R +G G
Sbjct: 123 Q-QMQDKKAKLNPAICFTMLGHHLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTAGQK 181
Query: 212 VLQHQIAFVAEAMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
++ H I ++ E + ++ + + T+P L+ Q H + R+F S
Sbjct: 182 IVTHMIPYIEETRKQIFELKEADFGM-TAPGLELNQMAHENVNVRIFIS 229
>sp|A7X5M5|UREF_STAA1 Urease accessory protein UreF OS=Staphylococcus aureus (strain Mu3
/ ATCC 700698) GN=ureF PE=3 SV=1
Length = 229
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 12/229 (5%)
Query: 39 HWSEWQLLDSILPTGGFAHSFGLEAAIQARLISSPDD------LRTYVIHILENTGSLLL 92
H +Q DS PTG F+HSFGLE IQ +I DD L+ ++ L + L +
Sbjct: 6 HLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIH--DDHTFIAWLKMFLQEQLTYSDGLAM 63
Query: 93 PFVCTATTSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMR 152
V A + D + +D+++ + +R + G+ ++++A ++ P +
Sbjct: 64 RLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMGTRMVKLALELYNS-PWIAWYH 122
Query: 153 EISLNFGDVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPL-GAA 211
+ + + A F ++ LG+ T Y++ + + A R +G G
Sbjct: 123 Q-QMQDKKAKLNPAICFTMLGHHLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTAGQK 181
Query: 212 VLQHQIAFVAEAMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
++ H I ++ E + ++ + + T+P L+ Q H + R+F S
Sbjct: 182 IVTHMIPYIEETRKQIFELKEADFGM-TAPGLELNQMAHENVNVRIFIS 229
>sp|Q7N4Y5|UREF_PHOLL Urease accessory protein UreF OS=Photorhabdus luminescens subsp.
laumondii (strain TT01) GN=ureF PE=3 SV=1
Length = 228
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 93/227 (40%), Gaps = 19/227 (8%)
Query: 44 QLLDSILPTGGFAHSFGLEAAIQARLISS----PDDLRTYVIHILENTGSLLLPFVCTAT 99
Q DS+LP G F+ S GLE+AIQ++++ D RT ++ + + G ++ C A
Sbjct: 11 QFADSVLPVGAFSFSNGLESAIQSKIVYDVATLSDFTRTALLQAVSSDGRAVMA-ACQAL 69
Query: 100 TSPDLET-----WHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREI 154
S + W +R L NE SR T G L +A V E + +I
Sbjct: 70 NSGQHDAAISHDWAIFNRKL-----NEESRTMVTRMGKKLAEMAVEVTGESLIAWWLAQI 124
Query: 155 SLNFGDVAFHHAPL-FGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPLGAAVL 213
D+A P+ ++ LG + + I+SAA RL V + +
Sbjct: 125 K---SDIAAGTYPITLAVVMSALGAAPREVIVMHQYGVAMTILSAAIRLMRVTHIDIQRI 181
Query: 214 QHQIAFVAEAMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
+ E + + +E+ +P+ D + H F+RLF +
Sbjct: 182 LFSLNQDIELFCDEAEKGGIEQMTSYAPMTDVLAALHVSAFTRLFSN 228
>sp|Q8NV89|UREF_STAAW Urease accessory protein UreF OS=Staphylococcus aureus (strain MW2)
GN=ureF PE=3 SV=1
Length = 229
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 12/229 (5%)
Query: 39 HWSEWQLLDSILPTGGFAHSFGLEAAIQARLISSPDD------LRTYVIHILENTGSLLL 92
H +Q DS PTG F+HSFGLE IQ +I DD L+ ++ L + L +
Sbjct: 6 HLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIH--DDHTFIAWLKMFLQEQLTYSDGLAM 63
Query: 93 PFVCTATTSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMR 152
V A + D + +D+++ + +R + G+ ++++A ++ P +
Sbjct: 64 RLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMGTRMVKLALELYNS-PWIAWYH 122
Query: 153 EISLNFGDVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPL-GAA 211
+ + + A F ++ LG+ T Y++ + + A R +G G
Sbjct: 123 Q-QMQDKKAKLNPAICFTMLGHHLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTAGQK 181
Query: 212 VLQHQIAFVAEAMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
++ H I ++ E K+ + + T+P L+ Q H + R+F S
Sbjct: 182 IVTHMIPYI-EGTRKQIFELKEADFGMTAPGLELNQMAHENVNVRIFIS 229
>sp|A8Z389|UREF_STAAT Urease accessory protein UreF OS=Staphylococcus aureus (strain
USA300 / TCH1516) GN=ureF PE=3 SV=1
Length = 229
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 12/229 (5%)
Query: 39 HWSEWQLLDSILPTGGFAHSFGLEAAIQARLISSPDD------LRTYVIHILENTGSLLL 92
H +Q DS PTG F+HSFGLE IQ +I DD L+ ++ L + L +
Sbjct: 6 HLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIH--DDHTFIAWLKMFLQEQLTYSDGLAM 63
Query: 93 PFVCTATTSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMR 152
V A + D + +D+++ + +R + G+ ++++A ++ P +
Sbjct: 64 RLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMGTRMVKLALELYNS-PWIAWYH 122
Query: 153 EISLNFGDVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPL-GAA 211
+ + + A F ++ LG+ T Y++ + + A R +G G
Sbjct: 123 Q-QMQDKKAKLNPAICFTMLGHHLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTAGQK 181
Query: 212 VLQHQIAFVAEAMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
++ H I ++ E K+ + + T+P L+ Q H + R+F S
Sbjct: 182 IVTHMIPYI-EGTRKQIFELKEADFGMTAPGLELNQMAHENVNVRIFIS 229
>sp|Q6G730|UREF_STAAS Urease accessory protein UreF OS=Staphylococcus aureus (strain
MSSA476) GN=ureF PE=3 SV=1
Length = 229
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 12/229 (5%)
Query: 39 HWSEWQLLDSILPTGGFAHSFGLEAAIQARLISSPDD------LRTYVIHILENTGSLLL 92
H +Q DS PTG F+HSFGLE IQ +I DD L+ ++ L + L +
Sbjct: 6 HLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIH--DDHTFIAWLKMFLQEQLTYSDGLAM 63
Query: 93 PFVCTATTSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMR 152
V A + D + +D+++ + +R + G+ ++++A ++ P +
Sbjct: 64 RLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMGTRMVKLALELYNS-PWIAWYH 122
Query: 153 EISLNFGDVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPL-GAA 211
+ + + A F ++ LG+ T Y++ + + A R +G G
Sbjct: 123 Q-QMQDKKAKLNPAICFTMLGHHLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTAGQK 181
Query: 212 VLQHQIAFVAEAMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
++ H I ++ E K+ + + T+P L+ Q H + R+F S
Sbjct: 182 IVTHMIPYI-EGTRKQIFELKEADFGMTAPGLELNQMAHENVNVRIFIS 229
>sp|A6QJD2|UREF_STAAE Urease accessory protein UreF OS=Staphylococcus aureus (strain
Newman) GN=ureF PE=3 SV=1
Length = 229
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 12/229 (5%)
Query: 39 HWSEWQLLDSILPTGGFAHSFGLEAAIQARLISSPDD------LRTYVIHILENTGSLLL 92
H +Q DS PTG F+HSFGLE IQ +I DD L+ ++ L + L +
Sbjct: 6 HLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIH--DDHTFIAWLKMFLQEQLTYSDGLAM 63
Query: 93 PFVCTATTSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMR 152
V A + D + +D+++ + +R + G+ ++++A ++ P +
Sbjct: 64 RLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMGTRMVKLALELYNS-PWIAWYH 122
Query: 153 EISLNFGDVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPL-GAA 211
+ + + A F ++ LG+ T Y++ + + A R +G G
Sbjct: 123 Q-QMQDKKAKLNPAICFTMLGHHLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTAGQK 181
Query: 212 VLQHQIAFVAEAMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
++ H I ++ E K+ + + T+P L+ Q H + R+F S
Sbjct: 182 IVTHMIPYI-EGTRKQIFELKEADFGMTAPGLELNQMAHENVNVRIFIS 229
>sp|Q5HDR6|UREF_STAAC Urease accessory protein UreF OS=Staphylococcus aureus (strain COL)
GN=ureF PE=3 SV=1
Length = 229
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 12/229 (5%)
Query: 39 HWSEWQLLDSILPTGGFAHSFGLEAAIQARLISSPDD------LRTYVIHILENTGSLLL 92
H +Q DS PTG F+HSFGLE IQ +I DD L+ ++ L + L +
Sbjct: 6 HLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIH--DDHTFIAWLKMFLQEQLTYSDGLAM 63
Query: 93 PFVCTATTSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMR 152
V A + D + +D+++ + +R + G+ ++++A ++ P +
Sbjct: 64 RLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMGTRMVKLALELYNS-PWIAWYH 122
Query: 153 EISLNFGDVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPL-GAA 211
+ + + A F ++ LG+ T Y++ + + A R +G G
Sbjct: 123 Q-QMQDKKAKLNPAICFTMLGHHLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTAGQK 181
Query: 212 VLQHQIAFVAEAMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
++ H I ++ E K+ + + T+P L+ Q H + R+F S
Sbjct: 182 IVTHMIPYI-EGTRKQIFELKEADFGMTAPGLELNQMAHENVNVRIFIS 229
>sp|Q2G2K7|UREF_STAA8 Urease accessory protein UreF OS=Staphylococcus aureus (strain NCTC
8325) GN=ureF PE=3 SV=1
Length = 229
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 12/229 (5%)
Query: 39 HWSEWQLLDSILPTGGFAHSFGLEAAIQARLISSPDD------LRTYVIHILENTGSLLL 92
H +Q DS PTG F+HSFGLE IQ +I DD L+ ++ L + L +
Sbjct: 6 HLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIH--DDHTFIAWLKMFLQEQLTYSDGLAM 63
Query: 93 PFVCTATTSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMR 152
V A + D + +D+++ + +R + G+ ++++A ++ P +
Sbjct: 64 RLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMGTRMVKLALELYNS-PWIAWYH 122
Query: 153 EISLNFGDVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPL-GAA 211
+ + + A F ++ LG+ T Y++ + + A R +G G
Sbjct: 123 Q-QMQDKKAKLNPAICFTMLGHHLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTAGQK 181
Query: 212 VLQHQIAFVAEAMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
++ H I ++ E K+ + + T+P L+ Q H + R+F S
Sbjct: 182 IVTHMIPYI-EGTRKQIFELKEADFGMTAPGLELNQMAHENVNVRIFIS 229
>sp|Q2FEK1|UREF_STAA3 Urease accessory protein UreF OS=Staphylococcus aureus (strain
USA300) GN=ureF PE=3 SV=1
Length = 229
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 12/229 (5%)
Query: 39 HWSEWQLLDSILPTGGFAHSFGLEAAIQARLISSPDD------LRTYVIHILENTGSLLL 92
H +Q DS PTG F+HSFGLE IQ +I DD L+ ++ L + L +
Sbjct: 6 HLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIH--DDHTFIAWLKMFLQEQLTYSDGLAM 63
Query: 93 PFVCTATTSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMR 152
V A + D + +D+++ + +R + G+ ++++A ++ P +
Sbjct: 64 RLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMGTRMVKLALELYNS-PWIAWYH 122
Query: 153 EISLNFGDVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPL-GAA 211
+ + + A F ++ LG+ T Y++ + + A R +G G
Sbjct: 123 Q-QMQDKKAKLNPAICFTMLGHHLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTAGQK 181
Query: 212 VLQHQIAFVAEAMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
++ H I ++ E K+ + + T+P L+ Q H + R+F S
Sbjct: 182 IVTHMIPYI-EGTRKQIFELKEADFGMTAPGLELNQMAHENVNVRIFIS 229
>sp|Q79VJ2|UREF_CORGL Urease accessory protein UreF OS=Corynebacterium glutamicum (strain
ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB
10025) GN=ureF PE=2 SV=1
Length = 226
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 15/224 (6%)
Query: 44 QLLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTY--VIHILENTGSLLLPFVCTATTS 101
L DS LPTG FAHSFG E + A I++ ++ + + V+ ++ T S L T
Sbjct: 11 HLSDSALPTGAFAHSFGFETYMDAERITNAEEFQDWLKVLLKVQLTSSDALAMRMFYAT- 69
Query: 102 PDLETWHKLD-RMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNFGD 160
P + +LD R+ T E+ R+A+ G+ + + A ++ VP + + E+ + +
Sbjct: 70 PTVSELKRLDERLFAGTPAREI-REANARMGTRMAEIVAETYS-VPLIVEYLEL-IQHRE 126
Query: 161 VAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVG-PLGAAVLQHQIAF 219
++ H A + G+ + A++ T+ +I A R G PLG Q +
Sbjct: 127 LSGHPALALALATHSAGIDVDRAIHAHLTATVSSLIQNAVR----GIPLGQMAGQRVMFA 182
Query: 220 VAE---AMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
+ E A +K+ + + C P LD Q H +RLF S
Sbjct: 183 MREHIGAAVKRSANLDEIDFCSGDPGLDISQMVHETQRARLFMS 226
>sp|B2GI04|UREF_KOCRD Urease accessory protein UreF OS=Kocuria rhizophila (strain ATCC
9341 / DSM 348 / NBRC 103217 / DC2201) GN=ureF PE=3 SV=1
Length = 234
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 14/226 (6%)
Query: 44 QLLDSILPTGGFAHSFGLEAAIQARLISSPDD----LRTYVIHILENTGSLLLPFVCTAT 99
QL DS LPTG F+HS G E + A + + L +V L +T +L + V A
Sbjct: 14 QLTDSALPTGAFSHSLGFETYMAAEQLEDRESFSAWLEMFVDQQLTHTDALAVRLVYAAG 73
Query: 100 TSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNFG 159
D E LD ++ A R+ T G LL + A + + + +
Sbjct: 74 ---DFERVEDLDELVTAQALPRQIREGGTTMGRRLLSIGARSYP--GEWVRRYQQGVEEE 128
Query: 160 DVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATR-LNLVGPLGAAVLQHQIA 218
+ H A ++G++ L + T+ ++++ + + A R + L G AV++
Sbjct: 129 RLRGHQATVWGVLARGLDVPEDTAVASHVYAAVISLTQNAVRGIPLGQNTGQAVIRAAQE 188
Query: 219 FVAEAML--KKWKDRAVEEAC--QTSPLLDTVQGCHAYLFSRLFCS 260
+V A+ ++ + + E +P L+ Q H +RLF S
Sbjct: 189 WVGRAVATSRRLSEEGIAEEVLGAVAPGLEIAQMNHERQRARLFMS 234
>sp|P44395|UREF_HAEIN Urease accessory protein UreF OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ureF PE=3 SV=2
Length = 235
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 6/162 (3%)
Query: 45 LLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTYV-IHILEN---TGSLLLPFVCTATT 100
L+D LP GGF HS GLE +Q R++ S L YV +L+N L A
Sbjct: 18 LVDPTLPIGGFNHSNGLETFVQQRVVESKATLEEYVQTQLLQNWIYNDGAYLSLAFDAMC 77
Query: 101 SPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNFGD 160
+ + +LD L AT SR+ S G LL++ + E +L + ++
Sbjct: 78 EGNFDRLCELDWQLSATKVARESREGSFKLGVRLLKIF--IRYETHTLLTAYQQAIAEKR 135
Query: 161 VAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRL 202
V + +F ++ +GL + + A+ + +I+ +L
Sbjct: 136 VQGYFPIVFAMVAQAMGLSKADTLYAFYYNAAVGVITNGVKL 177
>sp|A5UH43|UREF_HAEIG Urease accessory protein UreF OS=Haemophilus influenzae (strain
PittGG) GN=ureF PE=3 SV=1
Length = 235
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 6/162 (3%)
Query: 45 LLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTYV-IHILEN---TGSLLLPFVCTATT 100
L+D LP GGF HS GLE +Q R++ S L YV +L+N L A
Sbjct: 18 LVDPTLPIGGFNHSNGLETFVQQRVVESKATLEEYVQTQLLQNWIYNDGAYLSLAFDAMN 77
Query: 101 SPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNFGD 160
+ + +LD L AT SR+ S G LL++ + E +L + ++
Sbjct: 78 EGNFDRLCELDWQLSATKVARESREGSFKLGVRLLKI--FIRYETHALLTAYQKAIAEKR 135
Query: 161 VAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRL 202
V + +F ++ +GL + + A+ + +I+ +L
Sbjct: 136 VQGYFPIVFAMVAQAMGLTKADTLYAFYYNAAVGVITNGVKL 177
>sp|C1APC8|UREF_MYCBT Urease accessory protein UreF OS=Mycobacterium bovis (strain BCG /
Tokyo 172 / ATCC 35737 / TMC 1019) GN=ureF PE=3 SV=1
Length = 211
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 92/216 (42%), Gaps = 14/216 (6%)
Query: 45 LLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTYVIHILENTGSLLLPFVCTATTSPDL 104
L DS LPTG HS G+E AI A L++ L ++ + G LL + A +L
Sbjct: 10 LADSRLPTGAHVHSGGIEEAIAAGLVTGLATLEAFLKRRVRTHG-LLTASIAAAVHRGEL 68
Query: 105 ETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNFGDVAFH 164
DR DA +R AS +QG L+R+A V+ + E+ H
Sbjct: 69 AV-DDADRETDARTPAPAARHASRSQGRGLIRLARRVWPD----SGWEELGPR-----PH 118
Query: 165 HAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPLGAAVLQHQIAFVAEAM 224
A + G + L GL + ++IT+ AA RL + P V+ Q++ + E +
Sbjct: 119 LAVVAGRVGALSGLAPEHNALHLVYITMTGSAIAAQRLLALDPAEVTVVTFQLSELCEQI 178
Query: 225 LKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
++ A + PLLDT+ H LF S
Sbjct: 179 AQEAT---AGLADLSDPLLDTLAQRHDERVRPLFVS 211
>sp|A1KJR3|UREF_MYCBP Urease accessory protein UreF OS=Mycobacterium bovis (strain BCG /
Pasteur 1173P2) GN=ureF PE=3 SV=1
Length = 211
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 92/216 (42%), Gaps = 14/216 (6%)
Query: 45 LLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTYVIHILENTGSLLLPFVCTATTSPDL 104
L DS LPTG HS G+E AI A L++ L ++ + G LL + A +L
Sbjct: 10 LADSRLPTGAHVHSGGIEEAIAAGLVTGLATLEAFLKRRVRTHG-LLTASIAAAVHRGEL 68
Query: 105 ETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNFGDVAFH 164
DR DA +R AS +QG L+R+A V+ + E+ H
Sbjct: 69 AV-DDADRETDARTPAPAARHASRSQGRGLIRLARRVWPD----SGWEELGPR-----PH 118
Query: 165 HAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPLGAAVLQHQIAFVAEAM 224
A + G + L GL + ++IT+ AA RL + P V+ Q++ + E +
Sbjct: 119 LAVVAGRVGALSGLAPEHNALHLVYITMTGSAIAAQRLLALDPAEVTVVTFQLSELCEQI 178
Query: 225 LKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
++ A + PLLDT+ H LF S
Sbjct: 179 AQEAT---AGLADLSDPLLDTLAQRHDERVRPLFVS 211
>sp|Q7VET6|UREF_MYCBO Urease accessory protein UreF OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=ureF PE=3 SV=1
Length = 211
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 92/216 (42%), Gaps = 14/216 (6%)
Query: 45 LLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTYVIHILENTGSLLLPFVCTATTSPDL 104
L DS LPTG HS G+E AI A L++ L ++ + G LL + A +L
Sbjct: 10 LADSRLPTGAHVHSGGIEEAIAAGLVTGLATLEAFLKRRVRTHG-LLTASIAAAVHRGEL 68
Query: 105 ETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNFGDVAFH 164
DR DA +R AS +QG L+R+A V+ + E+ H
Sbjct: 69 AV-DDADRETDARTPAPAARHASRSQGRGLIRLARRVWPD----SGWEELGPR-----PH 118
Query: 165 HAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPLGAAVLQHQIAFVAEAM 224
A + G + L GL + ++IT+ AA RL + P V+ Q++ + E +
Sbjct: 119 LAVVAGRVGALSGLAPEHNALHLVYITMTGSAIAAQRLLALDPAEVTVVTFQLSELCEQI 178
Query: 225 LKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
++ A + PLLDT+ H LF S
Sbjct: 179 AQEAT---AGLADLSDPLLDTLAQRHDERVRPLFVS 211
>sp|Q8FQX0|UREF_COREF Urease accessory protein UreF OS=Corynebacterium efficiens (strain
DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
GN=ureF PE=3 SV=1
Length = 229
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 96/224 (42%), Gaps = 15/224 (6%)
Query: 44 QLLDSILPTGGFAHSFGLEAAIQARLISSPDD----LRTYVIHILENTGSLLLPFVCTAT 99
QL+DS LPTG F+HS G E + +I L+ ++ L T ++++ V +T
Sbjct: 14 QLMDSALPTGAFSHSHGFETYLHRGVIHDASSFGVWLQMFIQQQLTFTDAVVIREVFRST 73
Query: 100 TSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNFG 159
+ L+ +LD+++ A E R A G +L +A + + + RE+
Sbjct: 74 S---LKRVGELDQLITAQAVPEQIRTAGKTMGIRMLEIAEQGYPDPALIWYRREVDQR-- 128
Query: 160 DVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPLGAAVLQHQIAF 219
++ H A ++ ++ L + + +++ T +I A R P G QH I
Sbjct: 129 TLSGHPAIVWALVARALDVAEDEAVAQHLYATSMSLIHNAVR---AVPFGQNAGQHLIRQ 185
Query: 220 VAE---AMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
E A + D ++ +P L+ Q H +R+F S
Sbjct: 186 AQEWVTAAVGNSADIEFDDIGSITPGLEIAQMQHENQRARMFMS 229
>sp|P50050|UREF_MYCTU Urease accessory protein UreF OS=Mycobacterium tuberculosis GN=ureF
PE=3 SV=1
Length = 211
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 92/216 (42%), Gaps = 14/216 (6%)
Query: 45 LLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTYVIHILENTGSLLLPFVCTATTSPDL 104
L DS LPTG HS G+E AI A +++ L ++ + G LL + A +L
Sbjct: 10 LADSRLPTGAHVHSGGIEEAIAAGMVTGLATLEAFLKRRVRTHG-LLTASIAAAVHRGEL 68
Query: 105 ETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNFGDVAFH 164
DR DA +R AS +QG L+R+A V+ + E+ H
Sbjct: 69 AV-DDADRETDARTPAPAARHASRSQGRGLIRLARRVWPD----SGWEELGPR-----PH 118
Query: 165 HAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPLGAAVLQHQIAFVAEAM 224
A + G + L GL + ++IT+ AA RL + P V+ Q++ + E +
Sbjct: 119 LAVVAGRVGALSGLAPEHNALHLVYITMTGSAIAAQRLLALDPAEVTVVTFQLSELCEQI 178
Query: 225 LKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
++ A + PLLDT+ H LF S
Sbjct: 179 AQEAT---AGLADLSDPLLDTLAQRHDERVRPLFVS 211
>sp|A5U3L8|UREF_MYCTA Urease accessory protein UreF OS=Mycobacterium tuberculosis (strain
ATCC 25177 / H37Ra) GN=ureF PE=3 SV=1
Length = 211
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 92/216 (42%), Gaps = 14/216 (6%)
Query: 45 LLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTYVIHILENTGSLLLPFVCTATTSPDL 104
L DS LPTG HS G+E AI A +++ L ++ + G LL + A +L
Sbjct: 10 LADSRLPTGAHVHSGGIEEAIAAGMVTGLATLEAFLKRRVRTHG-LLTASIAAAVHRGEL 68
Query: 105 ETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNFGDVAFH 164
DR DA +R AS +QG L+R+A V+ + E+ H
Sbjct: 69 AV-DDADRETDARTPAPAARHASRSQGRGLIRLARRVWPD----SGWEELGPR-----PH 118
Query: 165 HAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPLGAAVLQHQIAFVAEAM 224
A + G + L GL + ++IT+ AA RL + P V+ Q++ + E +
Sbjct: 119 LAVVAGRVGALSGLAPEHNALHLVYITMTGSAIAAQRLLALDPAEVTVVTFQLSELCEQI 178
Query: 225 LKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
++ A + PLLDT+ H LF S
Sbjct: 179 AQEAT---AGLADLSDPLLDTLAQRHDERVRPLFVS 211
>sp|A5U9V8|UREF_HAEIE Urease accessory protein UreF OS=Haemophilus influenzae (strain
PittEE) GN=ureF PE=3 SV=1
Length = 235
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 6/149 (4%)
Query: 45 LLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTYV-IHILEN---TGSLLLPFVCTATT 100
L+D LP GGF HS GLE +Q R++ S L YV +L+N L A
Sbjct: 18 LVDPTLPIGGFNHSNGLETFVQQRVVESKATLEEYVQTQLLQNWIYNDGAYLSLAFDAMN 77
Query: 101 SPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNFGD 160
+ + +LD L AT SR+ S G LL++ + E +L + ++
Sbjct: 78 EGNFDRLCELDWQLSATKVARESREGSFKLGVRLLKI--FIRYETHTLLTAYQQAIAEKR 135
Query: 161 VAFHHAPLFGIICGLLGLHRGTSQRAYMF 189
V + +F ++ +GL + + A+ +
Sbjct: 136 VQGYFPIVFAMVAQAMGLTKADTLYAFYY 164
>sp|Q4QN11|UREF_HAEI8 Urease accessory protein UreF OS=Haemophilus influenzae (strain
86-028NP) GN=ureF PE=3 SV=1
Length = 235
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 6/149 (4%)
Query: 45 LLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTYV-IHILEN---TGSLLLPFVCTATT 100
L+D LP GGF HS GLE +Q R++ S L YV +L+N L A
Sbjct: 18 LVDPTLPIGGFNHSNGLETFVQQRVVESKATLEEYVQTQLLQNWIYNDGAYLSLAFDAMC 77
Query: 101 SPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNFGD 160
+ + +LD L AT SR+ S G LL++ + E +L + ++
Sbjct: 78 EGNFDRLCELDWQLSATKVARESREGSFKLGVRLLKI--FIRYETHTLLTAYQQAIAEKR 135
Query: 161 VAFHHAPLFGIICGLLGLHRGTSQRAYMF 189
V + +F ++ +GL + + A+ +
Sbjct: 136 VQGYFPIVFAMVAQAMGLSKADTLYAFYY 164
>sp|A3Q0D4|UREF_MYCSJ Urease accessory protein UreF OS=Mycobacterium sp. (strain JLS)
GN=ureF PE=3 SV=1
Length = 211
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 88/218 (40%), Gaps = 22/218 (10%)
Query: 47 DSILPTGGFAHSFGLEAAIQARLISSPDDLRTYVIHILENTGSLLLPFVCTATTSPDLET 106
DS LP GG HS G+E A+ + L+++ + L Y++ + G L+ A T
Sbjct: 12 DSRLPIGGHVHSGGVEEAVTSGLVTNLETLHAYLVRRVRTQG--LVAASIAAAVHAGTLT 69
Query: 107 WHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNFGDVAFHHA 166
DR DA +R AS AQG L R+A R + A A
Sbjct: 70 VAAADRETDARTPAPAARTASRAQGRGLARLA-------------RRVWPGHDWTALGRA 116
Query: 167 PLF----GIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPLGAAVLQHQIAFVAE 222
P G + + GL G + + ++ T+ +AA RL + P A L +A + +
Sbjct: 117 PHLPVASGAVGAVAGLTPGQTALSVVYTTMTGSATAAQRLLALDPGDVAALTFGLAPLCD 176
Query: 223 AMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
+ + + + PLLD + H+ LF S
Sbjct: 177 DVAAAAAEEPAD---LSDPLLDVLAQRHSERERPLFAS 211
>sp|Q8CNC7|UREF_STAES Urease accessory protein UreF OS=Staphylococcus epidermidis (strain
ATCC 12228) GN=ureF PE=3 SV=1
Length = 229
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 96/230 (41%), Gaps = 14/230 (6%)
Query: 39 HWSEWQLLDSILPTGGFAHSFGLEAAIQARLISSPDD----LRTYVIHILENTGSLLLPF 94
H +Q DS PTG F+HSFGLE IQ + + L ++ L + + +
Sbjct: 6 HLRLFQFCDSQFPTGAFSHSFGLETYIQRETVHDTETFIKWLHLFINEQLTYSDGIAMRI 65
Query: 95 VCTATTSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREI 154
V A + D + +++ L + +R + G+ ++++A ++ ++
Sbjct: 66 VYHALINNDKDKILDINQKLFVQNLPKETRIGAKQMGTRMVKLALDLYDSEWIQWYYNQM 125
Query: 155 SLNFGDVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPLGAAVLQ 214
N + H A F ++ LG+ + Y++ + + A R PLG Q
Sbjct: 126 KNN--KIKLHPAVCFTMLGHFLGVDVESIIDYYLYQNISSLTQNAVR---AIPLGQTAGQ 180
Query: 215 HQIAFVAEAMLKKWKDRAVE----EACQTSPLLDTVQGCHAYLFSRLFCS 260
Q+ A ++K ++ +E + T+P L+ Q H + R+F S
Sbjct: 181 -QVVTEMIAHIEKTRNHILELDEIDFGMTAPGLELNQMEHENVHVRIFIS 229
>sp|Q8YI00|UREF1_BRUME Urease accessory protein UreF 1 OS=Brucella melitensis biotype 1
(strain 16M / ATCC 23456 / NCTC 10094) GN=ureF1 PE=3
SV=1
Length = 241
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 7/221 (3%)
Query: 44 QLLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTYVIHILENTGS---LLLPFVCTATT 100
Q DS LP GGF+ S GLE+AIQ L+ + LR + + + + + L A
Sbjct: 24 QFGDSALPIGGFSFSNGLESAIQQNLVHDKETLREFTLTAMNQAATSDRIALLTAHRAAR 83
Query: 101 SPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNFGD 160
+ D +D+ + NE +R + G L ++AS+ + L + + +
Sbjct: 84 ADDRGALQVIDKAVFERKLNEETRLMTVRMGRKLCELSASIIDD--RLNRDWLECIKTAE 141
Query: 161 VAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPLGA-AVLQHQIAF 219
H G+ L + + A + I+ AA RL V + +L +
Sbjct: 142 TPGTHPVSLGLAFAALDVDGRDAFGAQQYGVATTILGAALRLMRVSFMDTQKILLEATST 201
Query: 220 VAEAMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
VA A ++ D +E+ +P++D + H R+F +
Sbjct: 202 VAPA-YEEIADAGIEDMASFAPMVDILAAVHVKGHVRMFMN 241
>sp|A3N2R1|UREF_ACTP2 Urease accessory protein UreF OS=Actinobacillus pleuropneumoniae
serotype 5b (strain L20) GN=ureF PE=3 SV=1
Length = 227
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 45 LLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTYV-IHILEN---TGSLLLPFVCTATT 100
L+D LP GGF HS GLE +Q ++S L YV +++N L A
Sbjct: 10 LVDPTLPIGGFNHSNGLETFVQQGKVNSRASLEEYVQTQLMQNWIYNDGAYLSLAFDAMA 69
Query: 101 SPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRV 137
+ DL+ +LD+ L A+ SR+ S G LL++
Sbjct: 70 NHDLDRLLQLDQELAASKIARESREGSYKLGVRLLKI 106
>sp|Q8FZW0|UREF2_BRUSU Urease accessory protein UreF 2 OS=Brucella suis biovar 1 (strain
1330) GN=ureF2 PE=3 SV=1
Length = 243
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 7/221 (3%)
Query: 44 QLLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTYVIHILENTGS---LLLPFVCTATT 100
Q DS LP GGF+ S GLE+AIQ L+ + LR + + + + + L A
Sbjct: 26 QFGDSALPIGGFSFSNGLESAIQQNLVHDKETLREFTLTAMNQAATSDGIALLTAHRAAR 85
Query: 101 SPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNFGD 160
+ D +D+ + NE +R + G L ++AS+ + L + + +
Sbjct: 86 ADDRGALQVIDKAVFERKLNEETRLMTVRMGRKLCELSASIIDD--RLNRDWLECIKTAE 143
Query: 161 VAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPLGA-AVLQHQIAF 219
H G+ L + + A + I+ AA RL V + +L +
Sbjct: 144 TPGTHPVSLGLAFAALDVDGRDAFGAQQYGVATTILGAALRLMRVSFMDTQKILLEATST 203
Query: 220 VAEAMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
VA A ++ D +E+ +P++D + H R+F +
Sbjct: 204 VAPA-YEEIADAGIEDMASFAPMVDILAAVHVKGHVRMFMN 243
>sp|A9M616|UREF2_BRUC2 Urease accessory protein UreF 2 OS=Brucella canis (strain ATCC
23365 / NCTC 10854) GN=ureF2 PE=3 SV=1
Length = 243
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 7/221 (3%)
Query: 44 QLLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTYVIHILENTGS---LLLPFVCTATT 100
Q DS LP GGF+ S GLE+AIQ L+ + LR + + + + + L A
Sbjct: 26 QFGDSALPIGGFSFSNGLESAIQQNLVHDKETLREFTLTAMNQAATSDGIALLTAHRAAR 85
Query: 101 SPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNFGD 160
+ D +D+ + NE +R + G L ++AS+ + L + + +
Sbjct: 86 ADDRGALQVIDKAVFERKLNEETRLMTVRMGRKLCELSASIIDD--RLNRDWLECIKTAE 143
Query: 161 VAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPLGA-AVLQHQIAF 219
H G+ L + + A + I+ AA RL V + +L +
Sbjct: 144 TPGTHPVSLGLAFAALDVDGRDAFGAQQYGVATTILGAALRLMRVSFMDTQKILLEATST 203
Query: 220 VAEAMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
VA A ++ D +E+ +P++D + H R+F +
Sbjct: 204 VAPA-YEEIADAGIEDMASFAPMVDILAAVHVKGHVRMFMN 243
>sp|Q57CE6|UREF2_BRUAB Urease accessory protein UreF 2 OS=Brucella abortus biovar 1
(strain 9-941) GN=ureF2 PE=3 SV=1
Length = 243
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 7/221 (3%)
Query: 44 QLLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTYVIHILENTGS---LLLPFVCTATT 100
Q DS LP GGF+ S GLE+AIQ L+ + LR + + + + + L A
Sbjct: 26 QFGDSALPIGGFSFSNGLESAIQQNLVHDKETLREFTLTAMNQAATSDGIALLTAHRAAR 85
Query: 101 SPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNFGD 160
+ D +D+ + NE +R + G L ++AS+ + L + + +
Sbjct: 86 ADDRGALQVIDKAVFERKLNEETRLMTVRMGRKLCELSASIIDD--RLNRDWLECIKTAE 143
Query: 161 VAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPLGA-AVLQHQIAF 219
H G+ L + + A + I+ AA RL V + +L +
Sbjct: 144 TPGTHPVSLGLAFAALDVDGRDAFGAQQYGVATTILGAALRLMRVSFMDTQKILLEATST 203
Query: 220 VAEAMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
VA A ++ D +E+ +P++D + H R+F +
Sbjct: 204 VAPA-YEEIADAGIEDMASFAPMVDILAAVHVKGHVRMFMN 243
>sp|Q2YQD7|UREF2_BRUA2 Urease accessory protein UreF 2 OS=Brucella abortus (strain 2308)
GN=ureF2 PE=3 SV=1
Length = 243
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 7/221 (3%)
Query: 44 QLLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTYVIHILENTGS---LLLPFVCTATT 100
Q DS LP GGF+ S GLE+AIQ L+ + LR + + + + + L A
Sbjct: 26 QFGDSALPIGGFSFSNGLESAIQQNLVHDKETLREFTLTAMNQAATSDGIALLTAHRAAR 85
Query: 101 SPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNFGD 160
+ D +D+ + NE +R + G L ++AS+ + L + + +
Sbjct: 86 ADDRGALQVIDKAVFERKLNEETRLMTVRMGRKLCELSASIIDD--RLNRDWLECIKTAE 143
Query: 161 VAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPLGA-AVLQHQIAF 219
H G+ L + + A + I+ AA RL V + +L +
Sbjct: 144 TPGTHPVSLGLAFAALDVDGRDAFGAQQYGVATTILGAALRLMRVSFMDTQKILLEATST 203
Query: 220 VAEAMLKKWKDRAVEEACQTSPLLDTVQGCHAYLFSRLFCS 260
VA A ++ D +E+ +P++D + H R+F +
Sbjct: 204 VAPA-YEEIADAGIEDMASFAPMVDILAAVHVKGHVRMFMN 243
>sp|Q5HLV9|UREF_STAEQ Urease accessory protein UreF OS=Staphylococcus epidermidis (strain
ATCC 35984 / RP62A) GN=ureF PE=3 SV=1
Length = 229
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 95/230 (41%), Gaps = 14/230 (6%)
Query: 39 HWSEWQLLDSILPTGGFAHSFGLEAAIQARLISSPDD----LRTYVIHILENTGSLLLPF 94
H +Q DS PTG F+HSFGLE IQ + + L ++ L + + +
Sbjct: 6 HLRLFQFCDSQFPTGAFSHSFGLETYIQRETVHDTETFIKWLHLFINEQLTYSDGIAMRI 65
Query: 95 VCTATTSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREI 154
V A + D + +++ L + +R + G+ ++++A ++ ++
Sbjct: 66 VYHALINNDKDKILDINQKLFVQNLPKETRIGAKQMGTRMVKLALDLYDSEWIQWYYNQM 125
Query: 155 SLNFGDVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPLGAAVLQ 214
N + H A F ++ LG+ + Y++ + + A R PLG Q
Sbjct: 126 KNN--KIKLHPAVCFTMLGHFLGVDVESIIDYYLYQNISSLTQNAVR---AIPLGQTAGQ 180
Query: 215 HQIAFVAEAMLKKWKDRAVE----EACQTSPLLDTVQGCHAYLFSRLFCS 260
Q+ A ++K + +E + T+P L+ Q H + R+F S
Sbjct: 181 -QVVTEMIAHIEKTRHHILELDEIDFGMTAPGLELNQMEHENVHVRIFIS 229
>sp|A6VTW0|UREF_MARMS Urease accessory protein UreF OS=Marinomonas sp. (strain MWYL1)
GN=ureF PE=3 SV=1
Length = 230
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 50 LPTGGFAHSFGLEAAIQARLISSPDDLRTYV-IHILENTGSLLLPFV---CTATTSPDLE 105
LP GGFA S G+E AI + + ++ ++ + + ++ + LP + A + E
Sbjct: 26 LPVGGFAFSQGMEYAIDQGWVKNKTEVSDWIGLQLQQSLARVDLPVLRLCMDAAKQQNTE 85
Query: 106 TWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASVFTEVPSLKKMREISLNFGDVAFHH 165
+L+ ++ A + R TA G AL R+ +S+ + P K++ E+S
Sbjct: 86 RLFELNDLVLACRETKELRLNDTAMGEALFRLMSSLQIDTP-FKRLDEMSF--------- 135
Query: 166 APLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPLGAAVLQH 215
LF I GL + + + L + I+AAT+L PLG Q
Sbjct: 136 VTLFAIAANHWGLQVDLACLGFAWSWLENQIAAATKLV---PLGQTQAQE 182
>sp|B1XJM1|UREF_SYNP2 Urease accessory protein UreF OS=Synechococcus sp. (strain ATCC
27264 / PCC 7002 / PR-6) GN=ureF PE=3 SV=1
Length = 225
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 14/173 (8%)
Query: 43 WQLLDSILPTGGFAHSFGLEAAIQARLISSPDDLRTYV-IHI----LENTGSLLLPFVCT 97
WQL++S P G + +S GLE +++ S + + ++ +H+ + S++L V
Sbjct: 7 WQLINSNFPLGAYNYSEGLEYLVESAGCSEVESFQDWLGLHLRYGSIRAEVSIVLRIV-Q 65
Query: 98 ATTSPDLETWHKLDRMLDATLTNEVSRKASTAQGSALLRVAASV-FTEVPSLKKMREISL 156
A S D + L+ T R+ S G++LL++ + + P L RE
Sbjct: 66 AIASGDFNQLQYWNTWLNGTRETRELRQQSIQMGNSLLKLLGDLDENKRPQLGACRE--- 122
Query: 157 NFGDVAFHHAPLFGIICGLLGLHRGTSQRAYMFITLRDIISAATRLNLVGPLG 209
G + H+A FGI L + + Y+ L +++SA +L PLG
Sbjct: 123 QIGK-SCHYAIAFGIAIALWDIESHQAVLGYLHSWLSNLVSAGVKLI---PLG 171
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,794,339
Number of Sequences: 539616
Number of extensions: 3539255
Number of successful extensions: 8909
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 8767
Number of HSP's gapped (non-prelim): 191
length of query: 260
length of database: 191,569,459
effective HSP length: 115
effective length of query: 145
effective length of database: 129,513,619
effective search space: 18779474755
effective search space used: 18779474755
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)