BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046368
(388 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356536532|ref|XP_003536791.1| PREDICTED: high mobility group B protein 15-like [Glycine max]
Length = 425
Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust.
Identities = 256/363 (70%), Positives = 285/363 (78%), Gaps = 15/363 (4%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+GG+ELDLHRLFVEVT+RGGI KII+ER+WK+VT++FNFPSTATNASFVLRKYY SL
Sbjct: 59 IPIVGGRELDLHRLFVEVTSRGGIAKIIRERKWKDVTSVFNFPSTATNASFVLRKYYASL 118
Query: 61 LRDYEQIYFFRSQ-------DSWQGPSTNAVSAPGTAQPSP--DIQSAV-QQPRINAAVL 110
L YEQIYFF+++ D+ Q ST V P P P +IQ AV QQ INAA L
Sbjct: 119 LYHYEQIYFFKAREWDPTAPDALQNQSTLPVPPPKMQFPQPLSEIQPAVFQQSNINAAKL 178
Query: 111 PEARPASSGGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINN 170
PEA ASS GSPVIGVIDGKFESGYLVTVTIGSE LKGVLYQAPQ P+ N
Sbjct: 179 PEAMAASSAGSPVIGVIDGKFESGYLVTVTIGSEKLKGVLYQAPQNPVLVASHHSASAKN 238
Query: 171 NNATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREIS 230
NNA+A GV RRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLK LH GKDREIS
Sbjct: 239 NNASASL--GVHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKLLHHGKDREIS 296
Query: 231 RMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAIPLQQRLPGAD 290
RMIGELWNKLKESEK VYQEKA+KDKERYR EMEDYRE+ K GQVISDA+PLQQRLP D
Sbjct: 297 RMIGELWNKLKESEKTVYQEKAMKDKERYRAEMEDYREKQKMGQVISDAVPLQQRLPEPD 356
Query: 291 VDMVEVDTKLDETGGDSPQTPDNESSSGVSDFED-DKTVEKDTEMEESPGVGLGTETSNV 349
DM++VD K+DE GDSPQTP E SSG SD+ED +KT E+ +M+ P +G+G ETS +
Sbjct: 357 ADMLDVDIKMDEAEGDSPQTP--EESSGGSDYEDYNKTAERGFDMDALPVIGMGAETSYL 414
Query: 350 DLE 352
E
Sbjct: 415 GSE 417
>gi|298205254|emb|CBI17313.3| unnamed protein product [Vitis vinifera]
Length = 483
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/380 (68%), Positives = 298/380 (78%), Gaps = 19/380 (5%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPIIGGKELDLHRLFVEVT+RGG+EKII+ERRWKEVTA+F+FPSTATNASFVLRKYY SL
Sbjct: 80 IPIIGGKELDLHRLFVEVTSRGGLEKIIRERRWKEVTAVFSFPSTATNASFVLRKYYVSL 139
Query: 61 LRDYEQIYFFRSQ-------DSWQGPSTNAVSAPGTAQP---SPDIQSA-VQQPRINAA- 108
L YEQIYFF++Q D+ Q PS V + G A+P SP+ Q A +QQ RI++A
Sbjct: 140 LHHYEQIYFFKAQGWAPISADASQSPSITPVPSHGLAEPVLPSPESQPAGIQQQRISSAD 199
Query: 109 VLPEARPASSGGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVI 168
+ P A PASS SPVIGVIDGKFESGYLVTVTIG+E LKGVLY+APQ P QVP ++VI
Sbjct: 200 IFPGASPASSTASPVIGVIDGKFESGYLVTVTIGTEKLKGVLYEAPQTPARQVPQYFSVI 259
Query: 169 NNNNATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDRE 228
NN + A V RRRRRKKSEIK+RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDRE
Sbjct: 260 TNNTESTPAAPTVHRRRRRKKSEIKKRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDRE 319
Query: 229 ISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAIPLQQRLPG 288
ISRMIGELW KLKE+EKAVYQEKA+KDKERYR+EMEDYRERLK GQ+ISDA+P+QQRLP
Sbjct: 320 ISRMIGELWTKLKENEKAVYQEKAVKDKERYRVEMEDYRERLKMGQIISDAVPIQQRLPH 379
Query: 289 ADVDMVEVDTKLDETGGDSPQTPDNE-SSSGVSDFEDDKTVEKDTEMEESP---GVGLGT 344
ADVDMVE + K + GG+SPQTP+NE SS +DDKT EK+ +ME P G
Sbjct: 380 ADVDMVEAEAKTEMEGGESPQTPENESSSGKTDSDDDDKTAEKEFDMETYPGVGVGVEGG 439
Query: 345 ETSN---VDLEISAEEPAFE 361
E SN V +E S EE +E
Sbjct: 440 ECSNVVVVGMETSVEEETYE 459
>gi|225433532|ref|XP_002266394.1| PREDICTED: high mobility group B protein 15-like [Vitis vinifera]
Length = 482
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/380 (68%), Positives = 298/380 (78%), Gaps = 19/380 (5%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPIIGGKELDLHRLFVEVT+RGG+EKII+ERRWKEVTA+F+FPSTATNASFVLRKYY SL
Sbjct: 79 IPIIGGKELDLHRLFVEVTSRGGLEKIIRERRWKEVTAVFSFPSTATNASFVLRKYYVSL 138
Query: 61 LRDYEQIYFFRSQ-------DSWQGPSTNAVSAPGTAQP---SPDIQSA-VQQPRINAA- 108
L YEQIYFF++Q D+ Q PS V + G A+P SP+ Q A +QQ RI++A
Sbjct: 139 LHHYEQIYFFKAQGWAPISADASQSPSITPVPSHGLAEPVLPSPESQPAGIQQQRISSAD 198
Query: 109 VLPEARPASSGGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVI 168
+ P A PASS SPVIGVIDGKFESGYLVTVTIG+E LKGVLY+APQ P QVP ++VI
Sbjct: 199 IFPGASPASSTASPVIGVIDGKFESGYLVTVTIGTEKLKGVLYEAPQTPARQVPQYFSVI 258
Query: 169 NNNNATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDRE 228
NN + A V RRRRRKKSEIK+RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDRE
Sbjct: 259 TNNTESTPAAPTVHRRRRRKKSEIKKRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDRE 318
Query: 229 ISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAIPLQQRLPG 288
ISRMIGELW KLKE+EKAVYQEKA+KDKERYR+EMEDYRERLK GQ+ISDA+P+QQRLP
Sbjct: 319 ISRMIGELWTKLKENEKAVYQEKAVKDKERYRVEMEDYRERLKMGQIISDAVPIQQRLPH 378
Query: 289 ADVDMVEVDTKLDETGGDSPQTPDNE-SSSGVSDFEDDKTVEKDTEMEESP---GVGLGT 344
ADVDMVE + K + GG+SPQTP+NE SS +DDKT EK+ +ME P G
Sbjct: 379 ADVDMVEAEAKTEMEGGESPQTPENESSSGKTDSDDDDKTAEKEFDMETYPGVGVGVEGG 438
Query: 345 ETSN---VDLEISAEEPAFE 361
E SN V +E S EE +E
Sbjct: 439 ECSNVVVVGMETSVEEETYE 458
>gi|147855747|emb|CAN83439.1| hypothetical protein VITISV_021289 [Vitis vinifera]
Length = 461
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/380 (68%), Positives = 298/380 (78%), Gaps = 19/380 (5%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPIIGGKELDLHRLFVEVT+RGG+EKII+ERRWKEVTA+F+FPSTATNASFVLRKYY SL
Sbjct: 58 IPIIGGKELDLHRLFVEVTSRGGLEKIIRERRWKEVTAVFSFPSTATNASFVLRKYYVSL 117
Query: 61 LRDYEQIYFFRSQ-------DSWQGPSTNAVSAPGTAQP---SPDIQSA-VQQPRINAA- 108
L YEQIYFF++Q D+ Q PS V + G A+P SP+ Q A +QQ RI++A
Sbjct: 118 LHHYEQIYFFKAQGWAPISADASQSPSITPVPSHGLAEPVLPSPESQPAGIQQQRISSAD 177
Query: 109 VLPEARPASSGGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVI 168
+ P A PASS SPVIGVIDGKFESGYLVTVTIG+E LKGVLY+APQ P QVP ++VI
Sbjct: 178 IFPGASPASSTASPVIGVIDGKFESGYLVTVTIGTEKLKGVLYEAPQTPARQVPQYFSVI 237
Query: 169 NNNNATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDRE 228
NN + A V RRRRRKKSEIK+RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDRE
Sbjct: 238 TNNTESTPAAPTVHRRRRRKKSEIKKRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDRE 297
Query: 229 ISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAIPLQQRLPG 288
ISRMIGELW KLKE+EKAVYQEKA+KDKERYR+EMEDYRERLK GQ+ISDA+P+QQRLP
Sbjct: 298 ISRMIGELWTKLKENEKAVYQEKAVKDKERYRVEMEDYRERLKMGQIISDAVPIQQRLPH 357
Query: 289 ADVDMVEVDTKLDETGGDSPQTPDNE-SSSGVSDFEDDKTVEKDTEMEESP---GVGLGT 344
ADVDMVE + K + GG+SPQTP+NE SS +DDKT EK+ +ME P G
Sbjct: 358 ADVDMVEAEAKTEMEGGESPQTPENESSSGKTDSDDDDKTAEKEFDMETYPGVGVGVEGG 417
Query: 345 ETSN---VDLEISAEEPAFE 361
E SN V +E S EE +E
Sbjct: 418 ECSNVVVVGMETSVEEETYE 437
>gi|356575009|ref|XP_003555635.1| PREDICTED: high mobility group B protein 15-like [Glycine max]
Length = 419
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 251/363 (69%), Positives = 284/363 (78%), Gaps = 20/363 (5%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+GG+ELDLHRLFVEV++RGGI KII+ER+WK+VT++FNFPSTATNASFVLRKYY SL
Sbjct: 58 IPIVGGRELDLHRLFVEVSSRGGIAKIIRERKWKDVTSVFNFPSTATNASFVLRKYYVSL 117
Query: 61 LRDYEQIYFFRSQ-------DSWQGPSTNAVSAPGTA--QPSPDIQSAV-QQPRINAAVL 110
L YEQIYFF+++ D Q ST V P QP + Q AV Q +NAA L
Sbjct: 118 LYHYEQIYFFKAREWDPIAPDVSQNQSTLPVPPPKMQFQQPLSETQPAVFQLSNVNAAKL 177
Query: 111 PEARPASSGGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINN 170
PEA ASS GSPVIGVIDGKFESGYLVTVTIGSE LKGVLYQAPQ P+ + +S++ +
Sbjct: 178 PEAMAASSAGSPVIGVIDGKFESGYLVTVTIGSEKLKGVLYQAPQNPV--LTASHHSASA 235
Query: 171 NNATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREIS 230
NN A A GV RRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLK LH GKDREIS
Sbjct: 236 NNNNASASLGVHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKLLHHGKDREIS 295
Query: 231 RMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAIPLQQRLPGAD 290
RMIGELWNKLKESEK VYQEKA+KDKERYR+EMEDYRE+LK G VISDA+PLQQRLP D
Sbjct: 296 RMIGELWNKLKESEKTVYQEKAMKDKERYRVEMEDYREKLKMGPVISDAVPLQQRLPEPD 355
Query: 291 VDMVEVDTKLDETGGDSPQTPDNESSSGVSDFED-DKTVEKDTEMEESPGVGLGTETSNV 349
DM LDE GDSPQTP+ ESSSG SD+ED +KT E+ +M+ P +G+G ETS +
Sbjct: 356 TDM------LDEAEGDSPQTPE-ESSSGGSDYEDYNKTAERGFDMDALPVIGMGAETSYL 408
Query: 350 DLE 352
E
Sbjct: 409 GSE 411
>gi|255554110|ref|XP_002518095.1| transcription factor, putative [Ricinus communis]
gi|223542691|gb|EEF44228.1| transcription factor, putative [Ricinus communis]
Length = 466
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 254/391 (64%), Positives = 290/391 (74%), Gaps = 17/391 (4%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPIIGG+ELDLHRLFVEVT+RGG+EKII+ERRWKEVTAIFNFPSTATNASFVLRKYY SL
Sbjct: 58 IPIIGGRELDLHRLFVEVTSRGGLEKIIRERRWKEVTAIFNFPSTATNASFVLRKYYGSL 117
Query: 61 LRDYEQIYFFRSQDSW--------QGPSTNAVSAPGTAQPSPDIQSAV-QQPRINAAVLP 111
L YEQ+YFF+++ W Q P + + A T QPSP+ Q+A QQ R N A L
Sbjct: 118 LHHYEQLYFFKAR-GWTPGSSVPMQSPLASRLPAQVTVQPSPEYQAATAQQQRTNTAELY 176
Query: 112 EARPASSGGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNN 171
AR ASSG S V+GVIDGKFESGYLVTVTIG+E LKGVLYQAPQ Q P SY++ NN
Sbjct: 177 GARIASSGSSQVMGVIDGKFESGYLVTVTIGTEKLKGVLYQAPQNHPGQEPQSYSIPANN 236
Query: 172 NATAHAVSGVQRRRRRKKSEIKRR-DPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREIS 230
A A SG+QRRRRR+K +R DPAHPKPNRSGYNFFFAEQHARLKPL+PGKDREIS
Sbjct: 237 TGDARAASGMQRRRRRRKKNEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREIS 296
Query: 231 RMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAIPLQQRLPGAD 290
RMIGELW+ + E+EKAVYQEKA+KDKERYRIEMEDYRERL+TG+VISDA+PLQQ LP D
Sbjct: 297 RMIGELWSNVNETEKAVYQEKAVKDKERYRIEMEDYRERLRTGRVISDAVPLQQWLPEHD 356
Query: 291 VDMVEVDTKLDET-GGDSPQTPDNESSSGVSDFEDDKTVEKDTEMEE-SPGVGLGTETSN 348
DMV+ D K DE G DS QTP+NESSSG SD D E DT E L +
Sbjct: 357 SDMVDADIKTDEIEGEDSLQTPENESSSGKSDSAD----EDDTAKESLDRAASLNIHAGH 412
Query: 349 VDLEISAEEPAFELPKAEENAKDKNVENVSD 379
+D++ AE PA L EEN D+ + V +
Sbjct: 413 MDIDSPAEAPASSLANKEENIGDQGADKVGN 443
>gi|357445043|ref|XP_003592799.1| High mobility group protein B3 [Medicago truncatula]
gi|355481847|gb|AES63050.1| High mobility group protein B3 [Medicago truncatula]
Length = 417
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/361 (63%), Positives = 275/361 (76%), Gaps = 28/361 (7%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP+IGG+ELDLHRLFVEVT+RGG EKIIK+R+WKEVT +FNFPSTATNASFVLRKYY SL
Sbjct: 58 IPVIGGRELDLHRLFVEVTSRGGFEKIIKDRKWKEVTLVFNFPSTATNASFVLRKYYTSL 117
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAV----SAPGTA------QPSPDIQSAV-QQPRINAAV 109
L YEQIY+F+++D W +++ + S P A PSP +Q AV QQ ++N+A
Sbjct: 118 LYHYEQIYYFKARD-WTNTTSDVLQSQSSIPAPAPKMQFSHPSPQVQPAVFQQLKVNSAP 176
Query: 110 LPE--ARPASSGGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNV 167
PE + +SS GS V+GVIDGKF+SGYLVTVTIGSE LKGVLYQAPQ P+ +P+S++
Sbjct: 177 -PEGLSMGSSSAGSQVVGVIDGKFDSGYLVTVTIGSEKLKGVLYQAPQNPV--LPASHHS 233
Query: 168 I--NNNNATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGK 225
+ NNNN TA GV RRRRRKKSE+K+RDPAHPKPNRSGYNFFFAEQH RLKPLH GK
Sbjct: 234 VPANNNNVTASV--GVHRRRRRKKSEMKKRDPAHPKPNRSGYNFFFAEQHPRLKPLHRGK 291
Query: 226 DREISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAIPLQQR 285
DREISR IGELWNKL ESEKAVYQ+KA+KDKERY EME YRE+LK +VISDA+PL+QR
Sbjct: 292 DREISRTIGELWNKLPESEKAVYQDKAVKDKERYITEMEYYREKLKNDEVISDAVPLRQR 351
Query: 286 LPGADVDMVEVDTKLDETGGDSPQTPDNESSSGVSDFEDDKTVEKDTEMEESPGVGLGTE 345
LP D DM+ + DS QTP+ S G D+EDDK EKD ++ P +GLG E
Sbjct: 352 LPEPDTDMLNAE-------ADSLQTPEQSSLDGSDDYEDDKAKEKDFSVDSLPVIGLGAE 404
Query: 346 T 346
+
Sbjct: 405 S 405
>gi|449442473|ref|XP_004139006.1| PREDICTED: high mobility group B protein 15-like [Cucumis sativus]
gi|449530303|ref|XP_004172135.1| PREDICTED: high mobility group B protein 15-like [Cucumis sativus]
Length = 491
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/340 (65%), Positives = 259/340 (76%), Gaps = 15/340 (4%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPIIGGKELDLHRLFVEVT+RGGIEK+I+ERRWKEVT++FNFPSTATNASFVLRKYY SL
Sbjct: 58 IPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYISL 117
Query: 61 LRDYEQIYFFR-------SQDSWQGPSTNAVSAPGTAQ--PSPDIQSAVQQPRINAAVLP 111
L +EQIYFF+ + DS PS +A+ G P D Q+A QP+ A LP
Sbjct: 118 LHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQGVTSMLPPSDNQAASHQPQSTATELP 177
Query: 112 EARPASS---GGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIH-QVPSSYNV 167
P+S+ GG PVIGVIDGKF+SGYLVTVT+G+E LKGVLYQAP+ P QV
Sbjct: 178 AVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAPEQPSQPQVLQPVGA 237
Query: 168 INNNNATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR 227
+ +T RRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPL+PGKDR
Sbjct: 238 FAKDGSTP-TTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDR 296
Query: 228 EISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAIPLQQRLP 287
EISRMIG+LWNKLKESE+ VYQEKA+KDKERYRIEM DYRE+L+TGQ+ISDA+PLQQRLP
Sbjct: 297 EISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTGQIISDAVPLQQRLP 356
Query: 288 GADVDMVEVDTKLDETGGDSPQTPDNESSSGVSDFEDDKT 327
D++MV D K +ET G QTPD+++S D + KT
Sbjct: 357 EPDLNMVYGD-KNEETEGGESQTPDHDTSYVEGDSGEYKT 395
>gi|224060381|ref|XP_002300171.1| high mobility group family [Populus trichocarpa]
gi|222847429|gb|EEE84976.1| high mobility group family [Populus trichocarpa]
Length = 348
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/310 (68%), Positives = 247/310 (79%), Gaps = 12/310 (3%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPII GKEL+LHRLFVEVT+RGGIEKII+E+RWKEVT++FNFPSTATNASFVLRKYY SL
Sbjct: 37 IPIIAGKELNLHRLFVEVTSRGGIEKIIREKRWKEVTSVFNFPSTATNASFVLRKYYGSL 96
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSA-VQQPRINAAVLPEARPASSG 119
L+ YEQ+Y+F+++ P + SA T QPSP+ Q+A V+Q N A L SS
Sbjct: 97 LQHYEQLYYFKARSWSPSPLISQCSAHVTVQPSPEYQAAAVKQKNTNTAEL-----RSSA 151
Query: 120 GSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATAHAVS 179
PV+GVIDGKFE GYLVTVT+GSE LKGVLYQAPQ VP + V NN +
Sbjct: 152 SPPVVGVIDGKFEGGYLVTVTVGSEKLKGVLYQAPQNQSWPVPQPHGVSANN------IP 205
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNK 239
G +RRRRRKKSEIKRRDPAHPKPNRSGYNFFF+EQHARLKPL+PGKDREISRMIGELWNK
Sbjct: 206 GTRRRRRRKKSEIKRRDPAHPKPNRSGYNFFFSEQHARLKPLYPGKDREISRMIGELWNK 265
Query: 240 LKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAIPLQQRLPGADVDMVEVDTK 299
+ +S+KAVYQEKAL+DKERY+IEME YRERL+TG+VI DA+PLQQ +PG D +MVE +
Sbjct: 266 INDSQKAVYQEKALRDKERYKIEMEGYRERLRTGKVIIDAVPLQQWIPGKDSEMVEASVR 325
Query: 300 LDETGGDSPQ 309
+ETGG S Q
Sbjct: 326 TEETGGGSLQ 335
>gi|357501441|ref|XP_003621009.1| High mobility group family [Medicago truncatula]
gi|355496024|gb|AES77227.1| High mobility group family [Medicago truncatula]
Length = 437
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/350 (60%), Positives = 252/350 (72%), Gaps = 34/350 (9%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PIIGGKELDL RLF+EVT+RGGIEK++KERRWKEVTA F+FPSTATNASFVLRKYY SL
Sbjct: 59 VPIIGGKELDLCRLFIEVTSRGGIEKLMKERRWKEVTAAFSFPSTATNASFVLRKYYSSL 118
Query: 61 LRDYEQIYFFRSQ-------DSWQGPSTNAVSAPGT--AQPSPDIQSA-VQQPRINAAVL 110
L YEQIY+FRS+ D+ Q ST +V A T QPSP Q+ +NA+ L
Sbjct: 119 LYHYEQIYYFRSKRWTPASSDALQNQSTMSVPASITQFLQPSPGTHPVDFQKSGVNASEL 178
Query: 111 PEARPASSGGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINN 170
P+ SS GS + GVIDGKFESGYLV+V++GSETLKGVLY++PQ ++ N
Sbjct: 179 PQV---SSSGSSLAGVIDGKFESGYLVSVSVGSETLKGVLYESPQ----------SIKIN 225
Query: 171 NNATAHAVSGVQRRRRRKKSEIKRR-DPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREI 229
NN A A GVQRRRRR+K +R DPAHPKPNRSGYNFFFAEQHARLK L+ D++I
Sbjct: 226 NNNIASAALGVQRRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKLLNQTMDKDI 285
Query: 230 SRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAIPLQQRLPGA 289
SRMIGELWN LKESEK VYQEKA+KDKERY+ EMEDYR+++KT V +A PLQQR P
Sbjct: 286 SRMIGELWNNLKESEKTVYQEKAIKDKERYQAEMEDYRDKMKTSIVTDNAGPLQQRFPEG 345
Query: 290 DVDMVEVDTKLDETGGDSPQTPDNESSSGVSDFEDDKTVEKDTEMEESPG 339
D +V+VD K+ DS QTP+ ESSSG SD+ V D M+ S G
Sbjct: 346 DSALVDVDIKMH----DSCQTPE-ESSSGESDY-----VADDINMDASSG 385
>gi|15220344|ref|NP_171980.1| high mobility group-box and ARID domain-binding domain-containing
protein [Arabidopsis thaliana]
gi|75192516|sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName:
Full=Nucleosome/chromatin assembly factor group D 15
gi|7211978|gb|AAF40449.1|AC004809_7 Contains similarity to the high mobility group family PF|00505
[Arabidopsis thaliana]
gi|56236040|gb|AAV84476.1| At1g04880 [Arabidopsis thaliana]
gi|56790208|gb|AAW30021.1| At1g04880 [Arabidopsis thaliana]
gi|225897878|dbj|BAH30271.1| hypothetical protein [Arabidopsis thaliana]
gi|332189634|gb|AEE27755.1| high mobility group-box and ARID domain-binding domain-containing
protein [Arabidopsis thaliana]
Length = 448
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/353 (61%), Positives = 252/353 (71%), Gaps = 23/353 (6%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PIIGG++LDLH+LFVEVT+RGGI KI+ ERRWKEVTA F FP TATNAS+VLRKYY SL
Sbjct: 52 VPIIGGRDLDLHKLFVEVTSRGGINKILNERRWKEVTATFVFPPTATNASYVLRKYYFSL 111
Query: 61 LRDYEQIYFFRSQ-----DSWQGPSTNAVSAPGTAQPSPDIQSAV--QQPRINAAVLPEA 113
L +YEQIYFFRS DS Q PS G +PS ++Q+ QP+IN A E
Sbjct: 112 LNNYEQIYFFRSNGQIPPDSMQSPSARPCFIQGAIRPSQELQALTFTPQPKINTA---EF 168
Query: 114 RPASSGGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQ----------APQYPIHQVPS 163
S GS V+GVIDGKFESGYLVTVTIGSE LKGVLYQ PQ +P+
Sbjct: 169 LGGSLAGSNVVGVIDGKFESGYLVTVTIGSEQLKGVLYQLLPQNTVSYQTPQQSHGVLPN 228
Query: 164 SYNVINNNNATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHP 223
+ N+ N A V+ +RRRRRKKSEIKRRDP HPKPNRSGYNFFFAEQHARLKPLHP
Sbjct: 229 TLNISANPQGVAGGVT--KRRRRRKKSEIKRRDPDHPKPNRSGYNFFFAEQHARLKPLHP 286
Query: 224 GKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAIPLQ 283
GKDR+ISRMIGELWNKL E EK +YQ KA++DKERYR EMEDYRE+ K GQ+IS+A+PLQ
Sbjct: 287 GKDRDISRMIGELWNKLNEDEKLIYQGKAMEDKERYRTEMEDYREKKKNGQLISNAVPLQ 346
Query: 284 QRLPGADVDMVEVDTKLDETGGDSPQTPDNESSSGVSDFEDDKTVEKDTEMEE 336
QRLP +VDM E D +DE D + + SS DD+++E D E+EE
Sbjct: 347 QRLPEQNVDMAEADLPIDEVEEDDEEGDSSGSSGESEP-HDDQSIETDPELEE 398
>gi|297848736|ref|XP_002892249.1| high mobility group family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297338091|gb|EFH68508.1| high mobility group family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 448
Score = 367 bits (941), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 220/351 (62%), Positives = 257/351 (73%), Gaps = 19/351 (5%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PIIGG++LDLH+LFVEVT+RGGI KI+ ERRWKEVTA F FP TATNAS+VLRKYY SL
Sbjct: 52 VPIIGGRDLDLHKLFVEVTSRGGINKILNERRWKEVTATFVFPPTATNASYVLRKYYFSL 111
Query: 61 LRDYEQIYFFRSQ-----DSWQGPSTNAVSAPGTAQPSPDIQSAV--QQPRINAAVLPEA 113
L +YEQIYFFRS DS Q PS G +PS ++Q+ QP+IN+ P
Sbjct: 112 LNNYEQIYFFRSSGQIPPDSLQIPSARPGLMHGAIRPSQELQALTFTPQPKINSEEFPGG 171
Query: 114 RPASSGGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQA-PQYPI-HQVPS-SYNVINN 170
A GS VIGVIDGKFESGYLVTVTIGSE LKGVL+Q PQ + HQ P S+ V+ N
Sbjct: 172 PVA---GSNVIGVIDGKFESGYLVTVTIGSEQLKGVLFQLLPQNTVAHQTPQQSHGVVPN 228
Query: 171 ---NNATAHAVSG--VQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGK 225
N+A V G +RRRRRKKSEIKRRDP HPKPNRSGYNFFFAEQHARLKPLHPGK
Sbjct: 229 TWNNSANPQGVMGGVTKRRRRRKKSEIKRRDPNHPKPNRSGYNFFFAEQHARLKPLHPGK 288
Query: 226 DREISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAIPLQQR 285
DR+ISR+IGELWNKL E EK VYQ KA++DKERYR EMEDYRE+ +TGQ+IS+A+PLQQR
Sbjct: 289 DRDISRIIGELWNKLNEDEKLVYQGKAIEDKERYRTEMEDYREKQRTGQLISNAVPLQQR 348
Query: 286 LPGADVDMVEVDTKLDETGGDSPQTPDNESSSGVSDFEDDKTVEKDTEMEE 336
LP +VDM E D +DE D + + SS DD+++E D E+EE
Sbjct: 349 LPEQNVDMAEADLPIDEVEEDEEEGDSSGSSGESEP-RDDQSIETDPELEE 398
>gi|116788272|gb|ABK24816.1| unknown [Picea sitchensis]
Length = 481
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 164/281 (58%), Positives = 198/281 (70%), Gaps = 14/281 (4%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P+IGGKELDLH L+VEVT+RGG++++IK+R+WK++TAIFNFP TATNASFVLRKYY SL
Sbjct: 90 VPVIGGKELDLHLLYVEVTSRGGLQQVIKDRKWKDITAIFNFPPTATNASFVLRKYYISL 149
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEAR----PA 116
L YEQ+YFF +Q P + + S +I P + A L + R P
Sbjct: 150 LYHYEQVYFFGAQGQPIPPPAALPAPSPVSH-SKNINELANPPSVEAKSLLKKRKRVDPM 208
Query: 117 SSGGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQ----YPIHQVPSSYNVINNNN 172
SS G PV GVIDGKFE+ YL+TV +GSE L+GVLY+ P Q PS N NN +
Sbjct: 209 SSMGHPVTGVIDGKFENAYLITVMVGSEKLRGVLYEMPAGVSGEQFLQAPSCTNNSNNGD 268
Query: 173 ATAHAVSGVQRRRRRK-KSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISR 231
SGV+ RRRR+ K E+K+RDP HPKPNRSGYNFFFAEQH +LK LHPGKDREIS+
Sbjct: 269 T----ASGVRPRRRRRRKDEMKKRDPDHPKPNRSGYNFFFAEQHTKLKALHPGKDREISK 324
Query: 232 MIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLKT 272
MIG+ WNKL E KAVYQE LKDKERY+ EME+YRER K
Sbjct: 325 MIGDSWNKLTEEAKAVYQELGLKDKERYKSEMEEYRERQKA 365
>gi|294464531|gb|ADE77776.1| unknown [Picea sitchensis]
Length = 351
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/323 (51%), Positives = 213/323 (65%), Gaps = 25/323 (7%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P IGGKELDLH L+VEVT+RGG++++IK+R+WKE+T +FNF T T+ASFVLRKYY +L
Sbjct: 2 VPTIGGKELDLHLLYVEVTSRGGLDQVIKDRKWKEITCVFNFVPTTTSASFVLRKYYMTL 61
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVS-AP-----GTAQPSPD-IQSAVQQPRINAAVLP-- 111
LR YE +YFF++Q +AVS P G+A D Q V++ + + LP
Sbjct: 62 LRYYEHVYFFQAQGQLPAAPLSAVSPVPQSSDNGSAHAGLDEKQPEVKKRKRKSLPLPIV 121
Query: 112 EARPASSGGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNN 171
P SS PV GVIDGKFE GYLVTV +GS+ L+GVLY P + + + +
Sbjct: 122 GVDPTSSVDQPVTGVIDGKFEHGYLVTVKLGSDILRGVLYHKPSESSGAQFAGISCLQDR 181
Query: 172 NATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISR 231
N A SG R++KK I++RDP HPKPNRSGYNFFFAEQHARLK LHP KDREIS+
Sbjct: 182 NVLDAAASGNSTCRKKKKDRIRKRDPNHPKPNRSGYNFFFAEQHARLKALHPDKDREISK 241
Query: 232 MIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAIPLQQ--RLP-- 287
MIGELWNKL E E+ VYQ+ LKDKERY+ EM++Y+ER K Q ++ + QQ ++P
Sbjct: 242 MIGELWNKLNEEERGVYQDFGLKDKERYKKEMQEYKERQKV-QFHTNEVLKQQFSKIPEP 300
Query: 288 -----------GADVDMVEVDTK 299
GADVDM+ + T+
Sbjct: 301 DYPFSTGVEPKGADVDMMILSTQ 323
>gi|223972853|gb|ACN30614.1| unknown [Zea mays]
Length = 448
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 173/374 (46%), Positives = 239/374 (63%), Gaps = 22/374 (5%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PIIGGK+LDLH+L+ EVT+RGGI+K+ E RW+EVTA F FP+TATNASF+L+KYY SL
Sbjct: 82 VPIIGGKDLDLHQLYKEVTSRGGIDKLKAENRWREVTASFIFPATATNASFMLKKYYMSL 141
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQPR-INAAVLPEARPASSG 119
L +EQ+YFFR Q +Q + ++ + + + Q+ ++ R INA++ A +SS
Sbjct: 142 LYHFEQLYFFRVQGWYQQEIDSRTNS--SIEVKTEAQAYHKRKRGINASLSDPA--SSSD 197
Query: 120 GSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSS-YNVINNNNATAHAV 178
V ++DGKFE GY++TV +GS++ K +LY + P +P+S V +NNN
Sbjct: 198 NVDVDVIVDGKFEHGYIITVIMGSKSTKAILYNCTEEPA--LPTSELAVASNNNDLKGGR 255
Query: 179 SGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWN 238
+ +K ++ DP HPKPNRSGYNFFF +QH LKP PG+DR IS+MIGE WN
Sbjct: 256 RRRR-----RKKKLSTTDPRHPKPNRSGYNFFFQDQHRMLKPQCPGQDRLISKMIGERWN 310
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAIPLQQRLPGADVDMVEVDT 298
L +KAVYQE+ ++DKERYR ++ YR+ TGQ IS+A+P++QRLP DV + EVD+
Sbjct: 311 NLSPEDKAVYQERGVQDKERYRTQLAAYRKL--TGQPISNAVPIEQRLPLTDVTIDEVDS 368
Query: 299 KLDETGGDSPQTPDNESSSGVSDFEDDKTVEKDTEMEESPGVGLGTETSNVDLEISAEEP 358
K+ E GD + SSS SD +KTVE + E SP V + T S + A+E
Sbjct: 369 KVSE--GDMLLSNQAYSSSDESDHSGEKTVEDELNTETSPEVSMETTGSLRHPDPCADED 426
Query: 359 AFEL-----PKAEE 367
FEL PKA+E
Sbjct: 427 HFELRRRENPKADE 440
>gi|226502280|ref|NP_001147007.1| HMG box family protein [Zea mays]
gi|195606414|gb|ACG25037.1| HMG box family protein [Zea mays]
Length = 448
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 173/374 (46%), Positives = 239/374 (63%), Gaps = 22/374 (5%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PIIGGK+LDLH+L+ EVT+RGGI+K+ E RW+EVTA F FP+TATNASF+L+KYY SL
Sbjct: 82 VPIIGGKDLDLHQLYKEVTSRGGIDKLKAENRWREVTASFIFPATATNASFMLKKYYMSL 141
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQPR-INAAVLPEARPASSG 119
L +EQ+YFFR Q +Q + ++ + + + Q+ ++ R INA++ A +SS
Sbjct: 142 LYHFEQLYFFRVQGWYQQEIDSRTNS--SIEVKTEAQAYHKRKRGINASLSDPA--SSSD 197
Query: 120 GSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSS-YNVINNNNATAHAV 178
V ++DGKFE GY++TV +GS++ K +LY + P +P+S V +NNN
Sbjct: 198 NVDVDVIVDGKFEHGYIITVIMGSKSTKAILYNCTEEPA--LPTSELAVASNNNDLKGGR 255
Query: 179 SGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWN 238
+ +K ++ DP HPKPNRSGYNFFF +QH LKP PG+DR IS+MIGE WN
Sbjct: 256 RRRR-----RKKKLSTTDPRHPKPNRSGYNFFFQDQHRMLKPQCPGQDRLISKMIGERWN 310
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAIPLQQRLPGADVDMVEVDT 298
L +KAVYQE+ ++DKERYR ++ YR+ TGQ IS+A+P++QRLP DV + EVD+
Sbjct: 311 NLSPEDKAVYQERGVQDKERYRTQLAAYRKL--TGQPISNAVPIEQRLPLTDVTIDEVDS 368
Query: 299 KLDETGGDSPQTPDNESSSGVSDFEDDKTVEKDTEMEESPGVGLGTETSNVDLEISAEEP 358
K+ E GD + SSS SD +KTVE + E SP V + T S + A+E
Sbjct: 369 KVSE--GDMLLSNQAYSSSDESDHSGEKTVEDELNTETSPEVSMETTGSLRHPDPCADED 426
Query: 359 AFEL-----PKAEE 367
FEL PKA+E
Sbjct: 427 HFELRRRENPKADE 440
>gi|357142287|ref|XP_003572521.1| PREDICTED: high mobility group B protein 15-like [Brachypodium
distachyon]
Length = 443
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 168/381 (44%), Positives = 232/381 (60%), Gaps = 19/381 (4%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PIIGGK+LDLH+LF EVT+RGGI+K+ E RW+EVTA F FP+TATNASF+L+KYY SL
Sbjct: 75 VPIIGGKDLDLHQLFKEVTSRGGIDKVKAENRWREVTASFIFPATATNASFMLKKYYMSL 134
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEARPASSGG 120
L +EQ YFF ++ W T+ S + + Q+ ++ R N+ P +SS
Sbjct: 135 LYHFEQQYFFGAE-GWHEQETDPRSM-SCVEVRAETQATQKRKRGNSG--PSDPASSSDN 190
Query: 121 SPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATAHAVSG 180
V +ID KFE GY+VTVT GS++ K +LY + P P+ INN +
Sbjct: 191 VDVDVLIDAKFEHGYIVTVTTGSKSTKAILYNFTEEPALATPAPAIAINNTDLKGGRRR- 249
Query: 181 VQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKL 240
+R++ ++ DP HPKPNRSGYNFFF +QH LKP +PG+DR IS+MIGE WN L
Sbjct: 250 -----KRRRKKLSTTDPRHPKPNRSGYNFFFQDQHRMLKPEYPGRDRLISKMIGERWNNL 304
Query: 241 KESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAIPLQQRLPGADVDMVEVDTKL 300
+KAVYQE+ ++DKERY+ ++ YRE ++TGQ IS+A+P+QQR P +V + EVD+ +
Sbjct: 305 SPEDKAVYQERGVQDKERYQAQLAAYREEIRTGQPISNAVPIQQRFPRTEVTIDEVDSNV 364
Query: 301 DETGGDSPQTPDNESSSGVSDFEDD---KTVE-KDTEMEESPGVGLGTETSNVDLEISAE 356
+ GD N+ + SD DD K VE ++ E SP + T S L SA+
Sbjct: 365 SK--GD--MLLSNQGYNNSSDESDDSGGKLVEDEEFNTETSPEPSMETTDSPGQLNPSAD 420
Query: 357 EPAFELPKAEENAKDKNVENV 377
FEL + EN K+ +N
Sbjct: 421 GDQFEL-RRRENPKENEKQNA 440
>gi|326509053|dbj|BAJ86919.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 451
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 167/383 (43%), Positives = 234/383 (61%), Gaps = 26/383 (6%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PIIGGK+LDLH+LF EVT+RGGI+K+ E RW+EVTA F FP+TATNASF+L+KYY SL
Sbjct: 77 VPIIGGKDLDLHQLFKEVTSRGGIDKVKAENRWREVTASFLFPATATNASFMLKKYYMSL 136
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEARPA-SSG 119
L +EQ+YFF +Q W T+ S P + + ++ V++ R +A + PA +S
Sbjct: 137 LYHFEQLYFFGAQ-GWYQQETDNRSLP-CIEVRAETENTVKRKRATSA---SSDPALASD 191
Query: 120 GSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATAHAVS 179
+ V +IDGKFE GY+VTV +GS++ K +LY + P + +NN +
Sbjct: 192 NADVDVIIDGKFEYGYIVTVVMGSKSTKAILYNYSEEPALTTLAPTMPVNNTGSKG---- 247
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNK 239
G +RR+RRKK + DP HPKPNRSGYNFFF +QH +LKP +P +DR IS+MIGE WN
Sbjct: 248 GHRRRQRRKK--LSTTDPRHPKPNRSGYNFFFQDQHRKLKPEYPSQDRLISKMIGERWNN 305
Query: 240 LKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAI-------PLQQRLPGADVD 292
L +KAVYQE+ ++DKERY+ ++ YRE L+TGQ IS+++ P+QQ P +V
Sbjct: 306 LSPEDKAVYQERGVQDKERYQSQLAAYREELRTGQPISNSMPIIGNDAPIQQTFPQTEVT 365
Query: 293 MVEVDTKLDETGGDSPQTPDNESSSGVSD---FEDDKTVEKDTEMEESPGVGLGTETSNV 349
+ EVD+K+ + N S GV +D+ DT SP + T S
Sbjct: 366 IDEVDSKVSKGDMLLSNQRYNNSDEGVDSGGKLVEDEEFNTDT----SPEPSMDTTDSPG 421
Query: 350 DLEISAEEPAFELPKAEENAKDK 372
L+ SA+ FEL + E K++
Sbjct: 422 PLDPSADGDRFELRRRENPNKNE 444
>gi|413936861|gb|AFW71412.1| hypothetical protein ZEAMMB73_535428 [Zea mays]
Length = 453
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 172/373 (46%), Positives = 240/373 (64%), Gaps = 20/373 (5%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PIIGGK+LDLH+L+ EVT+RGGI+K+ E RW+EVTA F FP+TATNASF+L+KYY SL
Sbjct: 87 VPIIGGKDLDLHQLYKEVTSRGGIDKVKAENRWREVTASFIFPATATNASFMLKKYYMSL 146
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQPR-INAAVLPEARPASSG 119
L +EQ+YFFR Q W ++ + + + Q+ ++ R IN + P + SS
Sbjct: 147 LYHFEQLYFFRVQ-GWHQQEIDS-RMNSSIEIKTEGQAYHKRKRGINTSSDPAS---SSD 201
Query: 120 GSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATAHAVS 179
V ++DGKFE GY+VTV +GS++ K +LY + P +P+ + NN+ +
Sbjct: 202 NVDVDVIVDGKFEHGYIVTVIMGSKSTKAILYNCTEEPA--LPTPEPPVANNST---GLK 256
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNK 239
GV+RRRRR+K ++ DP HPKPNRSGYNFFF +QH LKP +P +DR IS+MIGE WN
Sbjct: 257 GVRRRRRRRK-KLSTTDPRHPKPNRSGYNFFFQDQHRILKPQYPAQDRLISKMIGERWNN 315
Query: 240 LKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAIPLQQRLPGADVDMVEVDTK 299
L +KAVYQ++ ++DKERYR ++ Y+E L+TGQ IS+A+P+QQRLP +V + EVD+K
Sbjct: 316 LSPEDKAVYQQRGVEDKERYRTQLAAYKE-LRTGQPISNAVPIQQRLPLTEVTIDEVDSK 374
Query: 300 LDETGGDSPQTPDNESSSGVSDFEDDKTVEKDTEMEESPGVGLGTETSNVDLEISAEEPA 359
+ + D + SSS SD +K VE + E SP V + T S + S +
Sbjct: 375 VSQ--DDMLLSNQGYSSSDESDHSGEKNVEDELNTETSPEVSMETTGSPGHPDPSRDGDH 432
Query: 360 FEL-----PKAEE 367
FEL PKA+E
Sbjct: 433 FELRRRENPKADE 445
>gi|242065024|ref|XP_002453801.1| hypothetical protein SORBIDRAFT_04g017850 [Sorghum bicolor]
gi|241933632|gb|EES06777.1| hypothetical protein SORBIDRAFT_04g017850 [Sorghum bicolor]
Length = 455
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 168/388 (43%), Positives = 231/388 (59%), Gaps = 28/388 (7%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PIIGGK+LDLH+L+ EVT+RGGI+K+ E RW+EVTA F FP+TATNASF+L+KYY SL
Sbjct: 87 VPIIGGKDLDLHQLYKEVTSRGGIDKVKAENRWREVTASFIFPATATNASFMLKKYYMSL 146
Query: 61 LRDYEQIYFFRSQDSWQ-----GPSTNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEARP 115
L +EQ+YFFR Q W + +++ AQ A + + + P
Sbjct: 147 LYHFEQLYFFRVQ-GWHQQEIDSRTNSSIEVKTEAQ-------AYHKRKRGISASPSDPA 198
Query: 116 ASSGGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQ---YPIHQVPSSYNVINNNN 172
+SS V ++DGKFE GY+VTV +GS++ K +LY + P + P + N +
Sbjct: 199 SSSDNVDVDVIVDGKFEHGYIVTVIMGSKSTKAILYNCTEESALPTLEPPVASNSTDLKG 258
Query: 173 ATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRM 232
+ ++ DP HPKPNRSGYNFFF +QH LKP +PG+DR IS+M
Sbjct: 259 GRRRRRR---------RKKLSTTDPRHPKPNRSGYNFFFQDQHRMLKPQYPGQDRMISKM 309
Query: 233 IGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAIPLQQRLPGADVD 292
IGE WN L +KAVYQE+ ++DKERYR ++ Y+E L+TGQ IS+A+P++QRLP +V
Sbjct: 310 IGERWNNLSPEDKAVYQERGVQDKERYRTQLAAYKEELRTGQPISNAVPIEQRLPVTEVT 369
Query: 293 MVEVDTKLDETGGDSPQTPDNESSSGVSDFEDDKTVEKDTEMEESPGVGLGTETSNVDLE 352
+ EVD+K+ E GD + SSS SD +K VE + E SP V + T S +
Sbjct: 370 IDEVDSKVSE--GDMLLSNQGYSSSDESDHSGEKPVEDELNTETSPEVSVETTGSPGHPD 427
Query: 353 ISAEEPAFELPKAEENAKDKNVENVSDD 380
SA+ FEL + EN K +NV D
Sbjct: 428 PSADGDHFEL-RRRENPKADEKDNVPPD 454
>gi|115446099|ref|NP_001046829.1| Os02g0469900 [Oryza sativa Japonica Group]
gi|47497414|dbj|BAD19471.1| glutathione S-transferase GST16-like protein [Oryza sativa Japonica
Group]
gi|47497529|dbj|BAD19581.1| glutathione S-transferase GST16-like protein [Oryza sativa Japonica
Group]
gi|113536360|dbj|BAF08743.1| Os02g0469900 [Oryza sativa Japonica Group]
gi|215686854|dbj|BAG89704.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622836|gb|EEE56968.1| hypothetical protein OsJ_06686 [Oryza sativa Japonica Group]
gi|323388905|gb|ADX60257.1| ARID transcription factor [Oryza sativa Japonica Group]
Length = 467
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 165/376 (43%), Positives = 242/376 (64%), Gaps = 29/376 (7%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PIIGGK+LDLH+LF EVT+RGGI+K+ + RW+EVTA F FP+TATNASF+L+KYY SL
Sbjct: 98 VPIIGGKDLDLHQLFKEVTSRGGIDKVKSDNRWREVTASFIFPATATNASFMLKKYYMSL 157
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEARPASSGG 120
L +E++Y F +Q +Q + ++S + + Q++ ++ R + + + A+S
Sbjct: 158 LYHFERLYLFEAQGWYQETDSRSISC---IEMKAEGQASRKRKRGSNSCSSDL--AASLD 212
Query: 121 SPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATAHAVSG 180
+ V +IDGKFE GY+VTV +GS++ K VLY + P VP++ + ++A G
Sbjct: 213 NDVQVIIDGKFEHGYIVTVIMGSKSTKAVLYNCTEEPA--VPTAVPHVAIDSA-----EG 265
Query: 181 VQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKL 240
++ RRRR++ ++ DP HPKPNRSGYNFFF +QH +LKP +PG+DR IS+MIGE WN L
Sbjct: 266 IRPRRRRRRKKLSTTDPNHPKPNRSGYNFFFQDQHRKLKPEYPGQDRLISKMIGERWNNL 325
Query: 241 KESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAIPLQQRLPGADVDMVEVDTKL 300
+KAVYQEK ++DK RY+ ++ YRE+ +TGQ IS+A+P+QQRLP +V + EVD+K+
Sbjct: 326 GPEDKAVYQEKGVEDKARYQRQLALYREQ-RTGQPISNAVPIQQRLPQKEVTIDEVDSKV 384
Query: 301 DETGGD----------SPQTPDNESSSGVSDFEDDKTVEKDTEMEESPGVGLGTETSNVD 350
E GD S + D + SG + EDD+ +T SP + T S+
Sbjct: 385 SE--GDILLSNQGYSSSTSSSDETADSGEKNVEDDEEFNTET----SPEPSMETTDSHGQ 438
Query: 351 LEISAEEPAFELPKAE 366
+ SA+ FEL + E
Sbjct: 439 PDPSADGERFELRRRE 454
>gi|218190713|gb|EEC73140.1| hypothetical protein OsI_07164 [Oryza sativa Indica Group]
Length = 467
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 165/376 (43%), Positives = 242/376 (64%), Gaps = 29/376 (7%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PIIGGK+LDLH+LF EVT+RGGI+K+ + RW+EVTA F FP+TATNASF+L+KYY SL
Sbjct: 98 VPIIGGKDLDLHQLFKEVTSRGGIDKVKSDNRWREVTASFIFPATATNASFMLKKYYMSL 157
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEARPASSGG 120
L +E++Y F +Q +Q + ++S + + Q++ ++ R + + + A+S
Sbjct: 158 LYHFERLYLFEAQGWYQETDSRSISC---IEMKAEGQASRKRKRGSNSCSSDL--AASLD 212
Query: 121 SPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATAHAVSG 180
+ V +IDGKFE GY+VTV +GS++ K VLY + P VP++ + ++A G
Sbjct: 213 NDVQVIIDGKFEHGYIVTVIMGSKSTKAVLYNCTEEPA--VPTAVPHVAIDSA-----EG 265
Query: 181 VQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKL 240
++ RRRR++ ++ DP HPKPNRSGYNFFF +QH +LKP +PG+DR IS+MIGE WN L
Sbjct: 266 IRPRRRRRRKKLSTTDPNHPKPNRSGYNFFFQDQHRKLKPEYPGQDRLISKMIGERWNNL 325
Query: 241 KESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAIPLQQRLPGADVDMVEVDTKL 300
+KAVYQEK ++DK RY+ ++ YRE+ +TGQ IS+A+P+QQRLP +V + EVD+K+
Sbjct: 326 GPEDKAVYQEKGVEDKARYQRQLALYREQ-RTGQPISNAVPIQQRLPQKEVTIDEVDSKV 384
Query: 301 DETGGD----------SPQTPDNESSSGVSDFEDDKTVEKDTEMEESPGVGLGTETSNVD 350
E GD S + D + SG + EDD+ +T SP + T S+
Sbjct: 385 SE--GDILLSNQGYSSSTSSSDETADSGEKNVEDDEEFNTET----SPEPSMETTDSHGQ 438
Query: 351 LEISAEEPAFELPKAE 366
+ SA+ FEL + E
Sbjct: 439 PDPSADGERFELRRRE 454
>gi|255581935|ref|XP_002531766.1| transcription factor, putative [Ricinus communis]
gi|223528602|gb|EEF30622.1| transcription factor, putative [Ricinus communis]
Length = 313
Score = 260 bits (664), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 139/275 (50%), Positives = 175/275 (63%), Gaps = 38/275 (13%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +GGK LDLH LFVEVT+RGG+EK++++R+WKEV A FNFPST T+ASFVLRKYY SL
Sbjct: 64 VPTVGGKALDLHHLFVEVTSRGGLEKVVRDRKWKEVIAAFNFPSTITSASFVLRKYYLSL 123
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEA-----RP 115
L +EQ+Y F Q PS + V +N + E P
Sbjct: 124 LYHFEQVYQFHKQ-----------------VPSVSVSDDVNGNLVNGSATVEGVTVNQFP 166
Query: 116 ASSG---GSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNN 172
SS GS V G IDGKF++GYL+TVT+GSE LKGVLY P + SS+N
Sbjct: 167 GSSQLQLGSSVNGTIDGKFDNGYLITVTLGSEQLKGVLYHIPN-EFYMSQSSHN------ 219
Query: 173 ATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRM 232
S + RR RK+S + RDP+ PK +RSGYNFFFAE +A+LKPLH G+++ IS+
Sbjct: 220 ------SDLPPRRHRKRSRLLLRDPSRPKSHRSGYNFFFAEHYAQLKPLHYGQEKVISKK 273
Query: 233 IGELWNKLKESEKAVYQEKALKDKERYRIEMEDYR 267
IG LWN L E+EK +YQEK LKDKERY+ EM +YR
Sbjct: 274 IGLLWNNLTEAEKEIYQEKGLKDKERYKNEMLEYR 308
>gi|225463518|ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 [Vitis vinifera]
gi|296090037|emb|CBI39856.3| unnamed protein product [Vitis vinifera]
Length = 331
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/270 (51%), Positives = 180/270 (66%), Gaps = 23/270 (8%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P GGK LDLHRLFVEVT+RGG+EK+I++R+WKEVT +F FP+T T+ASFVLRKYY SL
Sbjct: 74 VPTTGGKALDLHRLFVEVTSRGGLEKVIRDRKWKEVTTVFKFPTTITSASFVLRKYYLSL 133
Query: 61 LRDYEQIYFFRSQD---SWQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEARPAS 117
L YEQ+Y+FR Q S P N+ G+A +P Q + + V P +P
Sbjct: 134 LHHYEQVYYFRKQSFPISMADP-LNSSPINGSAT-TPVFQDSATTNDL--PVSPRLQP-- 187
Query: 118 SGGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATAHA 177
G V G IDGKF++GYLV+V +GS+ LKGVLY P H SS NA+A
Sbjct: 188 --GCLVTGTIDGKFDNGYLVSVNLGSDVLKGVLYHIPNNESHMSRSS-------NASA-- 236
Query: 178 VSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELW 237
V R K+S++ RDP+ PK ++SGYNFFFAE +ARLKPL+ G++R IS+ IG LW
Sbjct: 237 ---VPPPRNWKRSQLALRDPSRPKRSQSGYNFFFAENYARLKPLYSGQERAISKKIGFLW 293
Query: 238 NKLKESEKAVYQEKALKDKERYRIEMEDYR 267
N+L ++EK VYQEK + DKERY+ EM +YR
Sbjct: 294 NRLTDAEKQVYQEKGMIDKERYKTEMLEYR 323
>gi|302766998|ref|XP_002966919.1| hypothetical protein SELMODRAFT_35440 [Selaginella moellendorffii]
gi|300164910|gb|EFJ31518.1| hypothetical protein SELMODRAFT_35440 [Selaginella moellendorffii]
Length = 305
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 137/277 (49%), Positives = 189/277 (68%), Gaps = 16/277 (5%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLL 61
P +GG +LDL+RL+ EVTARGG+E++IK+R WK++ A+FNFP T T+ASFVLRKYY SLL
Sbjct: 37 PRMGGNQLDLYRLYQEVTARGGLEQVIKDRLWKDIKAVFNFPRTTTSASFVLRKYYTSLL 96
Query: 62 RDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQ--PRINAAVLPEARPASSG 119
YEQ+YFFR++ S P N PG P ++S + P++ L +PA G
Sbjct: 97 HHYEQVYFFRAEGSLVSPPGN----PGFLLPENGVRSDELELGPKMQKRRL---QPAIDG 149
Query: 120 GSPVIGVIDG----KFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATA 175
++G++ G KFE GYLVTV IGS+ +GVLY P VP + + + +T
Sbjct: 150 KKKLVGIVTGSIEEKFEHGYLVTVVIGSDRFRGVLYHVPV--GSSVPQYASTVATSRSTP 207
Query: 176 HAVS-GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIG 234
A + GV+ RRRRK+ ++R+DP PK NRSGYN+FFAEQ A+LK ++P KDREIS+MIG
Sbjct: 208 EAANVGVRLRRRRKRIGMRRKDPNAPKLNRSGYNYFFAEQRAKLKLVYPDKDREISKMIG 267
Query: 235 ELWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLK 271
E W+ + E +K+ YQE+ +KDKERY+ E+ DYR+R+K
Sbjct: 268 ETWSSMTEEQKSPYQERGVKDKERYKREISDYRDRMK 304
>gi|18399977|ref|NP_566454.1| high mobility group-box and ARID domain-binding domain-containing
protein [Arabidopsis thaliana]
gi|75274126|sp|Q9LTT3.1|HMG10_ARATH RecName: Full=High mobility group B protein 10; AltName:
Full=Nucleosome/chromatin assembly factor group D 10
gi|13605513|gb|AAK32750.1|AF361582_1 AT3g13350/MDC11_14 [Arabidopsis thaliana]
gi|9294541|dbj|BAB02804.1| high mobility group protein-like [Arabidopsis thaliana]
gi|21593357|gb|AAM65306.1| unknown [Arabidopsis thaliana]
gi|22137084|gb|AAM91387.1| At3g13350/MDC11_14 [Arabidopsis thaliana]
gi|332641816|gb|AEE75337.1| high mobility group-box and ARID domain-binding domain-containing
protein [Arabidopsis thaliana]
Length = 319
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 125/277 (45%), Positives = 171/277 (61%), Gaps = 24/277 (8%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +GG LDLHRLF+EVT+RGGIE+++K+R+WKEV F+FP+T T+ASFVLRKYY
Sbjct: 63 VPTVGGNTLDLHRLFIEVTSRGGIERVVKDRKWKEVIGAFSFPTTITSASFVLRKYYLKF 122
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEARPASSGG 120
L E +Y+ S + A+ + P+P+ + +P++ G
Sbjct: 123 LFQLEHVYYLEKPVSSLQSTDEALKSLANESPNPE--EGIDEPQV--------------G 166
Query: 121 SPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATAHAVSG 180
V G IDGKF+SGYLVT+ +GS+ LKGVLY PQ P T A+
Sbjct: 167 YEVQGFIDGKFDSGYLVTMKLGSQELKGVLYHIPQTPSQS--------QQTMETPSAIVQ 218
Query: 181 VQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKL 240
+RR RKKS++ D PK +RSGYNFFFAEQ+ARLKP + G++R I++ IG +W+ L
Sbjct: 219 SSQRRHRKKSKLAVVDTQKPKCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMWSNL 278
Query: 241 KESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVIS 277
ESEK VYQ+K +KD ERYRIEM +Y+ ++G S
Sbjct: 279 TESEKQVYQDKGVKDVERYRIEMLEYKSSHESGATAS 315
>gi|167997946|ref|XP_001751679.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696777|gb|EDQ83114.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 290
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 130/272 (47%), Positives = 179/272 (65%), Gaps = 26/272 (9%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +GGK+LDLH L+VEVT RGG++++IK+R+WKE+T FNFP T T+AS+VLRKYY +L
Sbjct: 41 IPKMGGKDLDLHVLYVEVTQRGGLQQVIKDRKWKEITGAFNFPRTTTSASYVLRKYYITL 100
Query: 61 LRDYEQIYFFRSQDSWQGP-STNAVSAPGTA---QPSPDIQSAVQQPRINAAVLPEARPA 116
L YEQ+YFF S+ P S ++ P + + D S +Q + P
Sbjct: 101 LHHYEQLYFFGSRGLLVAPPSKHSKLLPNYSFYFSVTSDYCSKKKQ-----CICSAVNPV 155
Query: 117 SSGGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATAH 176
S+ G+ V G I+GKFE GYLVTVT+G+E L+GV+Y P P +VP H
Sbjct: 156 SAVGNAVSGAIEGKFEDGYLVTVTVGTEKLRGVIYHIP--PGQRVPQ------------H 201
Query: 177 AVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGEL 236
A V+ R+R+ + E+K+ DP P+ NR+GYNFFFAE+ A+LK ++P K+RE+SRMIG+
Sbjct: 202 A--QVKIRKRKLREELKK-DPNAPRSNRTGYNFFFAEERAKLKVIYPDKERELSRMIGDA 258
Query: 237 WNKLKESEKAVYQEKALKDKERYRIEMEDYRE 268
WN L E +K YQEK +KDKERY EM +Y++
Sbjct: 259 WNSLTEEQKLPYQEKGVKDKERYEKEMREYKQ 290
>gi|302755332|ref|XP_002961090.1| hypothetical protein SELMODRAFT_35436 [Selaginella moellendorffii]
gi|300172029|gb|EFJ38629.1| hypothetical protein SELMODRAFT_35436 [Selaginella moellendorffii]
Length = 295
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/277 (49%), Positives = 185/277 (66%), Gaps = 26/277 (9%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLL 61
P +GG +LDL+RL+ EVTARGG+E++IK+R WK++ A+FNFP T T+ASFVLRKYY SLL
Sbjct: 37 PRMGGNQLDLYRLYQEVTARGGLEQVIKDRLWKDIKAVFNFPRTTTSASFVLRKYYTSLL 96
Query: 62 RDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQ--PRINAAVLPEARPASSG 119
YEQ+YFFR++ S P N PG P ++S + P++ L +PA G
Sbjct: 97 HHYEQVYFFRAEGSLVSPPGN----PGFLLPENGVRSDELELGPKMQKRRL---QPAIDG 149
Query: 120 GSPVIGVIDG----KFESGYLVTVTIGSETLKGVLYQAP-QYPIHQVPSSYNVINNNNAT 174
++G++ G KFE GYLVTV IGS+ +GVLY P + P + NV
Sbjct: 150 KKKLVGIVTGSIEEKFEHGYLVTVVIGSDRFRGVLYHVPVGSSVPHTPEAANV------- 202
Query: 175 AHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIG 234
GV+ RRRRK+ ++R+DP PK NRSGYN+FFAEQ A+LK ++P KDREIS+MIG
Sbjct: 203 -----GVRLRRRRKRIGMRRKDPNAPKLNRSGYNYFFAEQRAKLKLVYPDKDREISKMIG 257
Query: 235 ELWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLK 271
E W+ + E +K+ YQE+ +KDKERY+ E+ DYR+R+K
Sbjct: 258 ETWSSMTEEQKSPYQERGVKDKERYKREISDYRDRMK 294
>gi|32490476|dbj|BAC79159.1| glutathione S-transferase GST 16 - like protein [Oryza sativa
Japonica Group]
gi|125564567|gb|EAZ09947.1| hypothetical protein OsI_32246 [Oryza sativa Indica Group]
gi|125606508|gb|EAZ45544.1| hypothetical protein OsJ_30204 [Oryza sativa Japonica Group]
Length = 306
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 174/276 (63%), Gaps = 23/276 (8%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP+IGGKE+DLH L+VEVT+RGG+ K+++ER+W+EV A F+FP+T T+AS+VLR+YY SL
Sbjct: 41 IPVIGGKEMDLHALYVEVTSRGGLAKVMEERKWREVMARFSFPATTTSASYVLRRYYLSL 100
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQ-SAVQQPRINAAVLPEARPASSG 119
L YEQ+YFFR+ + P+ +A+ T P ++ ++ Q P A A P G
Sbjct: 101 LHHYEQVYFFRAHGALLRPAASAL----TKTPRRKMRGTSDQSPAAAEAGKRMALPERLG 156
Query: 120 GSP----VIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATA 175
G P V G IDGKFE GYLVTV I +ETL+GVLY+ V A
Sbjct: 157 GEPCSFSVTGSIDGKFEHGYLVTVKIAAETLRGVLYR--------------VAPPPPPPA 202
Query: 176 HAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGE 235
R R++ ++RDPA P+PNRS YNFFF E+H LK HP ++RE SRMIG+
Sbjct: 203 APPPPPPPARGRRRRGRRQRDPAQPRPNRSAYNFFFKEKHPELKATHPHREREYSRMIGD 262
Query: 236 LWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLK 271
WN+L +K VY + +DKERY+ EM++Y ERLK
Sbjct: 263 AWNRLAADDKMVYYRHSAEDKERYKREMQEYNERLK 298
>gi|307136305|gb|ADN34129.1| high mobility group family [Cucumis melo subsp. melo]
Length = 324
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/284 (45%), Positives = 173/284 (60%), Gaps = 23/284 (8%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP+IGGKELDLH L+ EVT RGG EK++ E++W+EV ++F F T T+ASFVLRK+Y SL
Sbjct: 52 IPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSL 111
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEARPASSGG 120
L YEQ+Y F Q GP + P+ + N L E P ++
Sbjct: 112 LYHYEQVYLFGRQ----GPICVPQAPFSFGSPTSE----------NELALVEYTPKTTSF 157
Query: 121 SP-----VIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATA 175
SP V G IDGKF+ GYLVTV +GSE L+GVLY Q P PS ++ N
Sbjct: 158 SPGPPSEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPP----PSDLRPLSTNAIVP 213
Query: 176 HAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGE 235
+ + RR + ++ DP HPKPNRSGYNFFFAE+H +LK L+P ++RE ++MIGE
Sbjct: 214 YTGGRHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGE 273
Query: 236 LWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDA 279
WN L E+ VYQ LKDKERYR E+++Y+E+++ G + A
Sbjct: 274 SWNNLSPEERMVYQNIGLKDKERYRRELKEYKEKMRMGTDVDGA 317
>gi|297834160|ref|XP_002884962.1| high mobility group family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330802|gb|EFH61221.1| high mobility group family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 318
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 123/277 (44%), Positives = 171/277 (61%), Gaps = 24/277 (8%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +GG LDLHRLF+EVT+RGGIE+++K+R+WK+V F+FP+T T+ASFVLRKYY
Sbjct: 62 VPTVGGNTLDLHRLFIEVTSRGGIERVVKDRKWKDVIGAFSFPTTITSASFVLRKYYLKF 121
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEARPASSGG 120
L E +Y+ S + A+ + P+P+ + +P++ G
Sbjct: 122 LFQLEHVYYLEKPVSSIQSTDEAMKSLANESPNPE--EGIDEPQV--------------G 165
Query: 121 SPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATAHAVSG 180
V G IDGKF++GYLVT+ +GS+ LKGV+Y PQ P TA A
Sbjct: 166 YEVQGFIDGKFDNGYLVTMKLGSQELKGVIYHIPQTPSQS--------QQTMETASATVP 217
Query: 181 VQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKL 240
+RR RKKS++ D PK +RSGYNFFFAEQ+ARLKP + G++R I++ IG +W+ L
Sbjct: 218 SSQRRHRKKSKLAVVDNQKPKCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMWSNL 277
Query: 241 KESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVIS 277
ESEK VYQ+K +KD ERYRIEM +Y+ ++G S
Sbjct: 278 TESEKQVYQDKGVKDVERYRIEMLEYKSSHESGATAS 314
>gi|449455571|ref|XP_004145526.1| PREDICTED: high mobility group B protein 9-like [Cucumis sativus]
gi|449519744|ref|XP_004166894.1| PREDICTED: high mobility group B protein 9-like [Cucumis sativus]
Length = 324
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 132/284 (46%), Positives = 173/284 (60%), Gaps = 23/284 (8%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP+IGGKELDLH L+ EVT RGG EK++ E++W+EV ++F F T T+ASFVLRK+Y SL
Sbjct: 52 IPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSL 111
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEARPASSGG 120
L YEQ+Y F Q GP + P P S N L E P ++
Sbjct: 112 LYHYEQVYLFGRQ----GP----ICVPQAPFPFGSPTSE------NELALVEYTPKTTSF 157
Query: 121 SP-----VIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATA 175
SP V G IDGKF+ GYLVTV +GSE L+GVLY Q P PS ++ N
Sbjct: 158 SPGPPSEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPP----PSDLRPLSTNAIVP 213
Query: 176 HAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGE 235
+ + RR + ++ DP HPKPNRSGYNFFFAE+H +LK L+P ++RE ++MIGE
Sbjct: 214 YTGGRYRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGE 273
Query: 236 LWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDA 279
WN L E+ VYQ LKDKERYR E+++Y+E+++ G + A
Sbjct: 274 SWNNLSPEERMVYQNIGLKDKERYRRELKEYKEKMRLGTEVDGA 317
>gi|356508987|ref|XP_003523234.1| PREDICTED: high mobility group B protein 9-like [Glycine max]
Length = 322
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 129/277 (46%), Positives = 179/277 (64%), Gaps = 12/277 (4%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP+IGGKELDLH L+VEVT R G EK++ E++W+EV ++F F +T T+ASFVLRK+Y SL
Sbjct: 50 IPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSVFKFAATTTSASFVLRKHYFSL 109
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPG-TAQPSPDIQSAVQQPRINAAVLPEARPASSG 119
L YEQ++FF+++ PS +A S + +P I +P N+ PE+R +
Sbjct: 110 LYHYEQVHFFKARGPIYTPSADAFSGNSPSWRPELAIVEYSPKPMDNS---PESRAEDTS 166
Query: 120 GSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQY-PIHQVPSSYNVINNNNATAHAV 178
G I+GKF+ GYLV+V +GSE L+GVLY Q P +P + I N H
Sbjct: 167 CLSGNGTIEGKFDCGYLVSVKLGSEVLRGVLYHPEQLVPPPSIPKHESAIVPINRKPH-- 224
Query: 179 SGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWN 238
R RRKK++ +R DP +PKPNRSGYNFFFAE+H LK L+P ++RE ++MIG+ WN
Sbjct: 225 ----RSGRRKKNK-RRWDPNYPKPNRSGYNFFFAEKHYTLKTLYPNREREFTKMIGQSWN 279
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQV 275
L E+ VYQ L+DKERY+ E+ +Y+E++K Q
Sbjct: 280 SLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLRQT 316
>gi|224122224|ref|XP_002330570.1| high mobility group family [Populus trichocarpa]
gi|222872128|gb|EEF09259.1| high mobility group family [Populus trichocarpa]
Length = 316
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 136/274 (49%), Positives = 173/274 (63%), Gaps = 34/274 (12%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +GGK LDLH LFVEVT+RGGIEK+I +R+WKEV FNFP+T T+ASFVLRK+Y SL
Sbjct: 65 VPTVGGKALDLHHLFVEVTSRGGIEKVITDRKWKEVITAFNFPTTITSASFVLRKHYLSL 124
Query: 61 LRDYEQIYFFRSQ-------DSWQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEA 113
L +EQ+Y F Q D+ G S SA + S+ QQ +I
Sbjct: 125 LYHFEQVYHFNKQIPLVSGTDAMNGRSLVNGSATLEEGAITNQFSSSQQLQI-------- 176
Query: 114 RPASSGGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNA 173
G V G+IDGKF++GYLVTV +G+ LKGVLY P + H+ S +
Sbjct: 177 ------GCSVSGIIDGKFDNGYLVTVNLGTNQLKGVLYHIP-HTFHESQDSRS------- 222
Query: 174 TAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMI 233
S + RRRRK+S + RDP+ PK NRSGYNFFF E +A+LKPLH G+++ IS+ I
Sbjct: 223 -----SDLPPRRRRKRSRLALRDPSQPKSNRSGYNFFFTEHYAQLKPLHHGQEKVISKKI 277
Query: 234 GELWNKLKESEKAVYQEKALKDKERYRIEMEDYR 267
G LWN L E+EK VYQEK L+DKE+YR EM +YR
Sbjct: 278 GLLWNNLTEAEKQVYQEKGLRDKEKYRNEMLEYR 311
>gi|168062434|ref|XP_001783185.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665327|gb|EDQ52016.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 312
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/280 (45%), Positives = 177/280 (63%), Gaps = 17/280 (6%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +GG +LDLH L+VEVT+RGG+E++IK+R+WKEV F FP T+AS++LRKYY L
Sbjct: 41 IPKLGGNDLDLHLLYVEVTSRGGLEQVIKDRKWKEVINCFKFPENTTSASYILRKYYVGL 100
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEARPASSGG 120
L +EQ YFF + P T +++ P+ D Q ++ R + ++ PA S G
Sbjct: 101 LYYFEQAYFFGKKGPLIPPPTVDIAS----TPTED-QPGFKRTRKRKILPIQSMPAQSIG 155
Query: 121 SPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATAHAVSG 180
V I+GKFE G+LV+VT+G+E ++GVLY P Q + I N AT A
Sbjct: 156 LTVRTTIEGKFEHGFLVSVTVGTEKMRGVLYHVPAM---QRAPQHAYIPNYPATLGAEPI 212
Query: 181 VQRRR---------RRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISR 231
+ R RR+ ++ ++DP P+P+R+GYNFFFAEQ ARLK LHP KD+E+SR
Sbjct: 213 ITREEFSRRGLKRKRRRTDDMPKKDPNAPRPHRTGYNFFFAEQRARLKALHPEKDKELSR 272
Query: 232 MIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLK 271
MIG+ WN L E EK +YQ++ ++DKERY+ E+ +Y E LK
Sbjct: 273 MIGDAWNNLTEEEKTLYQDRGVQDKERYKTELREYLELLK 312
>gi|297842355|ref|XP_002889059.1| high mobility group family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297334900|gb|EFH65318.1| high mobility group family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 338
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 127/282 (45%), Positives = 176/282 (62%), Gaps = 11/282 (3%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP+IGGKELDLH L+VEVT RGG EK++ E++W+EV +F F +T T+ASFVLRK+Y +L
Sbjct: 61 IPVIGGKELDLHVLYVEVTRRGGYEKVVAEKKWREVGGVFRFSATTTSASFVLRKHYLNL 120
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEARPASSGG 120
L YEQ++ F ++ P+ + P T++ ++ R N P S
Sbjct: 121 LFHYEQVHLFTARGPLLHPTATFHANPSTSKEMALVEYTPPSIRYNNTHHPSQ---GSSS 177
Query: 121 SPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATAHAV-- 178
IG I+GKF+ GYLV V +GSE L GVLY + Q PSS + N A V
Sbjct: 178 FTAIGTIEGKFDCGYLVKVKLGSEILNGVLYHSAQ----PGPSSSPSADLNGAVVPYVET 233
Query: 179 SGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWN 238
+RR +++ +R DP +PKPNRSGYNFFFAE+H +LK L+P K+RE +++IGE W+
Sbjct: 234 GRRRRRLGKRRRSRRREDPNYPKPNRSGYNFFFAEKHCKLKSLYPNKEREFTKIIGESWS 293
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYRE--RLKTGQVISD 278
L E+ VYQ+ LKDKERY+ E+ +YRE RL+ G + +D
Sbjct: 294 NLSTEERMVYQDIGLKDKERYQRELNEYRETLRLRDGNMTND 335
>gi|255539100|ref|XP_002510615.1| transcription factor, putative [Ricinus communis]
gi|223551316|gb|EEF52802.1| transcription factor, putative [Ricinus communis]
Length = 338
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 182/282 (64%), Gaps = 15/282 (5%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP+IGG+ELDLH L+VE T RGG EK++ +++W+EV ++F F T T+ASFVLRK+Y L
Sbjct: 54 IPVIGGRELDLHILYVEATKRGGYEKVVADKKWREVGSVFKFSPTTTSASFVLRKHYFGL 113
Query: 61 LRDYEQIYFFRSQDSWQGP-STNAVSAPGTAQP-SPDIQSAVQQPRINAAVLPEARPASS 118
L YEQ++FF+ Q GP S++A + PG + P++ P + + P S
Sbjct: 114 LYHYEQVHFFKVQ----GPMSSSAAAFPGNSTLFRPELAIVEYSPEV---IKHRPEPPSE 166
Query: 119 GGSPV--IGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATAH 176
G S +G IDGKF+ GYLV+V +GSE L GVLY P P H SS + N+N +
Sbjct: 167 GSSSFSALGTIDGKFDCGYLVSVRVGSEVLSGVLYH-PDQPQHSF-SSISQCNDNALIPY 224
Query: 177 AVSGVQRRRRRKKSEIKRR--DPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIG 234
S + R++ RR DP++PKPNRSGYNFFFAE+H +LK L+P ++RE +++IG
Sbjct: 225 TGSRRRDHSARRRRRRSRRAGDPSYPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKIIG 284
Query: 235 ELWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVI 276
+ W+ L E+ VYQ LKDKERY+ E+++Y+ERLK + +
Sbjct: 285 QSWSNLSAEERMVYQNIGLKDKERYKRELKEYKERLKLRETM 326
>gi|15222957|ref|NP_177738.1| high mobility group-box and ARID domain-binding domain-containing
protein [Arabidopsis thaliana]
gi|75265821|sp|Q9SGS2.1|HMGB9_ARATH RecName: Full=High mobility group B protein 9; AltName:
Full=Nucleosome/chromatin assembly factor group D 09;
Short=Nucleosome/chromatin assembly factor group D 9
gi|6573729|gb|AAF17649.1|AC009978_25 T23E18.4 [Arabidopsis thaliana]
gi|20466328|gb|AAM20481.1| unknown protein [Arabidopsis thaliana]
gi|31711812|gb|AAP68262.1| At1g76110 [Arabidopsis thaliana]
gi|332197676|gb|AEE35797.1| high mobility group-box and ARID domain-binding domain-containing
protein [Arabidopsis thaliana]
Length = 338
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 126/273 (46%), Positives = 175/273 (64%), Gaps = 9/273 (3%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP+IGGKELDLH L+VEVT RGG EK++ E++W+EV +F F +T T+ASFVLRK+Y +L
Sbjct: 61 IPVIGGKELDLHVLYVEVTRRGGYEKVVVEKKWREVGGVFRFSATTTSASFVLRKHYLNL 120
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEARPASSGG 120
L YEQ++ F ++ GP + + A A PS + A+ + + P S G
Sbjct: 121 LFHYEQVHLFTAR----GPLLHPI-ATFHANPSTSKEMALVEYTPPSIRYHNTHPPSQGS 175
Query: 121 SPV--IGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATAHAV 178
S IG I+GKF+ GYLV V +GSE L GVLY + Q P++ V+NN
Sbjct: 176 SSFTAIGTIEGKFDCGYLVKVKLGSEILNGVLYHSAQPGPSSSPTA--VLNNAVVPYVET 233
Query: 179 SGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWN 238
+RR +++ +R DP +PKPNRSGYNFFFAE+H +LK L+P K+RE +++IGE W+
Sbjct: 234 GRRRRRLGKRRRSRRREDPNYPKPNRSGYNFFFAEKHCKLKSLYPNKEREFTKLIGESWS 293
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYRERLK 271
L E+ VYQ+ LKDKERY+ E+ +YRE L+
Sbjct: 294 NLSTEERMVYQDIGLKDKERYQRELNEYRETLR 326
>gi|225459781|ref|XP_002284786.1| PREDICTED: high mobility group B protein 9 [Vitis vinifera]
gi|302141699|emb|CBI18902.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/279 (44%), Positives = 175/279 (62%), Gaps = 30/279 (10%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP+IGGK+L+L+ L+VEVT RGG K++ +++W+EV+++FNF T T+AS+VLRK+Y ++
Sbjct: 54 IPVIGGKQLNLYVLYVEVTRRGGYHKVVMDKKWREVSSVFNFSPTTTSASYVLRKHYYNI 113
Query: 61 LRDYEQIYFFRSQDSWQGPSTNA-----VSAPGTAQPSPDIQSAVQQPRINAAVLPEARP 115
LR YE+ YF + GP NA VS Q + D + P I A +L
Sbjct: 114 LRKYERAYFLK------GPPLNATASIPVSDLSNLQQTADARRNASNPPIGAPIL----- 162
Query: 116 ASSGGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATA 175
+G I+ KF+ GYLV+V +GSETL GVLY Q PSSY I +N TA
Sbjct: 163 -------AVGTINAKFDCGYLVSVKMGSETLSGVLYHPGQ------PSSYTPIRTSNTTA 209
Query: 176 HAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGE 235
+ + + + RKK + +P PKPNRSGYNFFF+E+HA K L+P ++RE ++MIGE
Sbjct: 210 -SQTLITNKAARKKKRKRGGEPGRPKPNRSGYNFFFSEKHALFKSLYPDREREFTKMIGE 268
Query: 236 LWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQ 274
W+ L EK VYQ+ +KDKERY+ EM++Y+ER+ Q
Sbjct: 269 SWSSLSLEEKEVYQKLGIKDKERYKKEMKEYKERMGAVQ 307
>gi|147780606|emb|CAN69112.1| hypothetical protein VITISV_031839 [Vitis vinifera]
Length = 324
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/279 (44%), Positives = 174/279 (62%), Gaps = 30/279 (10%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP+IGGK+L+L+ L+VEVT RGG K++ +++W+EV+++FNF T T+AS+VLRK+Y ++
Sbjct: 54 IPVIGGKQLNLYVLYVEVTRRGGYHKVVMDKKWREVSSVFNFSPTTTSASYVLRKHYYNI 113
Query: 61 LRDYEQIYFFRSQDSWQGPSTNA-----VSAPGTAQPSPDIQSAVQQPRINAAVLPEARP 115
LR YE+ YF + GP NA VS Q + D + P I A +L
Sbjct: 114 LRKYERAYFLK------GPPLNATASIPVSDLSNLQQTADARRNASNPPIGAPIL----- 162
Query: 116 ASSGGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATA 175
+G I+ KF+ GYLV+V +GSETL GVLY Q PSSY I +N TA
Sbjct: 163 -------AVGTINAKFDCGYLVSVKMGSETLSGVLYHPGQ------PSSYTPIRTSNTTA 209
Query: 176 HAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGE 235
+ + + + R K + +P PKPNRSGYNFFF+E+HA K L+P ++RE ++MIGE
Sbjct: 210 -SQTLITNKAARXKKRKRGGEPGRPKPNRSGYNFFFSEKHALFKSLYPDREREFTKMIGE 268
Query: 236 LWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQ 274
W+ L EK VYQ+ +KDKERY+ EM++Y+ER+ Q
Sbjct: 269 SWSSLSLEEKEVYQKLGIKDKERYKKEMKEYKERMGAVQ 307
>gi|224085968|ref|XP_002307758.1| high mobility group family [Populus trichocarpa]
gi|222857207|gb|EEE94754.1| high mobility group family [Populus trichocarpa]
Length = 329
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 123/277 (44%), Positives = 174/277 (62%), Gaps = 13/277 (4%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP+IGGKELDL L+VE T RGG +K++ E++W+EV ++F F +T T+ASFVL+K+Y SL
Sbjct: 52 IPVIGGKELDLQVLYVETTNRGGYDKVVAEKKWREVGSVFCFSATTTSASFVLKKHYFSL 111
Query: 61 LRDYEQIYFFRSQDSWQGP-STNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEARPASSG 119
L YEQ++FF+ Q GP ST AV+ P + S + V+ P+ SS
Sbjct: 112 LYHYEQVHFFKIQ----GPVSTPAVAFPLGSPSSKTELAIVEYSPEPIRDCPDPSTESSS 167
Query: 120 GSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATAHAVS 179
G I+GKF+ GYLV+V +GSE L GVLY Q + Y+ V
Sbjct: 168 SFSASGTIEGKFDCGYLVSVQLGSEVLHGVLYHPDQQDLSNSIPQYD--------GAIVP 219
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNK 239
RRRR++ + DP++PKPNRSGYNFFFAE+H +LK L+P ++RE ++MIG+ W+
Sbjct: 220 YTPNRRRRRRRSRRSGDPSYPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGQSWSS 279
Query: 240 LKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVI 276
L E+ VYQ LKDKERY+ E+++Y+E+L+ Q +
Sbjct: 280 LSAEERMVYQNIGLKDKERYKRELKEYKEKLQLRQAM 316
>gi|118487139|gb|ABK95398.1| unknown [Populus trichocarpa]
Length = 317
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 123/277 (44%), Positives = 174/277 (62%), Gaps = 13/277 (4%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP+IGGKELDL L+VE T RGG +K++ E++W+EV ++F F +T T+ASFVL+K+Y SL
Sbjct: 40 IPVIGGKELDLQVLYVETTNRGGYDKVVAEKKWREVGSVFCFSATTTSASFVLKKHYFSL 99
Query: 61 LRDYEQIYFFRSQDSWQGP-STNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEARPASSG 119
L YEQ++FF+ Q GP ST AV+ P + S + V+ P+ SS
Sbjct: 100 LYHYEQVHFFKIQ----GPVSTPAVAFPLGSPSSKTELAIVEYSPEPIRDCPDPSTESSS 155
Query: 120 GSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATAHAVS 179
G I+GKF+ GYLV+V +GSE L GVLY Q + Y+ V
Sbjct: 156 SFSASGTIEGKFDCGYLVSVQLGSEVLHGVLYHPDQQDLSNSIPQYD--------GAIVP 207
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNK 239
RRRR++ + DP++PKPNRSGYNFFFAE+H +LK L+P ++RE ++MIG+ W+
Sbjct: 208 YTPNRRRRRRRSRRSGDPSYPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGQSWSS 267
Query: 240 LKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVI 276
L E+ VYQ LKDKERY+ E+++Y+E+L+ Q +
Sbjct: 268 LSAEERMVYQNIGLKDKERYKRELKEYKEKLQLRQAM 304
>gi|356517796|ref|XP_003527572.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group B protein
10-like [Glycine max]
Length = 339
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 120/275 (43%), Positives = 166/275 (60%), Gaps = 24/275 (8%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
I +GG LDLHRLFVEVT+RGGIEK+I +R+WKEV FNF T TNASF++RK Y S+
Sbjct: 72 ISTVGGTPLDLHRLFVEVTSRGGIEKVIVDRKWKEVILTFNFKDTITNASFMVRKSYLSM 131
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPG-TAQPS-----PDIQSAVQQPRINAAVLPEAR 114
L +EQ+Y+F Q P+T + G + QP P++ + P ++
Sbjct: 132 LYHFEQVYYFGRQGI--PPTTPDLMIRGQSCQPYSSTTIPEVAAVNDSP-------VQST 182
Query: 115 PASSGGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNAT 174
P + V G ID KF+ GY+VTVT+GSE L+ + + + V+
Sbjct: 183 PVQAHDDMVSGTIDAKFDVGYVVTVTLGSEQLQVSCFMF-------LITCPRVLMPKAHL 235
Query: 175 AHAVSGVQRR--RRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRM 232
H + + R + RK+++ RDP PK NRSGYNFFFAE +ARLKP + G++R IS+
Sbjct: 236 VHRILVMTRXNLQSRKRAKYAPRDPFRPKSNRSGYNFFFAENYARLKPSYHGQERAISKR 295
Query: 233 IGELWNKLKESEKAVYQEKALKDKERYRIEMEDYR 267
IG LWN L E+E+ VYQEK ++DKERYR E+ +Y+
Sbjct: 296 IGFLWNNLSEAERQVYQEKGIRDKERYRTELMEYK 330
>gi|356534491|ref|XP_003535787.1| PREDICTED: high mobility group B protein 15-like [Glycine max]
Length = 204
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/178 (60%), Positives = 131/178 (73%), Gaps = 5/178 (2%)
Query: 116 ASSGGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATA 175
+SS S VIGVID KFE GY+VTVT+GSE L GVLY A + + +P+ ++NN A
Sbjct: 4 SSSADSTVIGVIDQKFEGGYVVTVTMGSEQLNGVLYYAQEDSV-LLPAP----SHNNNNA 58
Query: 176 HAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGE 235
A S +++RRR KSEIKRR+PA PKP ++GYNFFFAE+HARLKP H GK+ +I RMIGE
Sbjct: 59 AAASLQKKKRRRSKSEIKRRNPALPKPKKTGYNFFFAEEHARLKPYHQGKETDIGRMIGE 118
Query: 236 LWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAIPLQQRLPGADVDM 293
W+KL ESEK VYQE A KDKERY EME+Y E+LK QVI DA+PL+Q P D D+
Sbjct: 119 NWSKLTESEKMVYQEMANKDKERYLKEMEEYVEKLKADQVIVDAVPLRQWPPQQDTDI 176
>gi|15222755|ref|NP_175961.1| high mobility group-box and ARID domain-binding domain-containing
protein [Arabidopsis thaliana]
gi|334302822|sp|Q9LG02.2|HMG11_ARATH RecName: Full=Putative high mobility group B protein 11; AltName:
Full=Nucleosome/chromatin assembly factor group D 11
gi|332195157|gb|AEE33278.1| high mobility group-box and ARID domain-binding domain-containing
protein [Arabidopsis thaliana]
Length = 337
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 106/275 (38%), Positives = 155/275 (56%), Gaps = 47/275 (17%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+GGK LDLHRLF EVT+RGG+EK+IK+RR KEV FNF +T TN++FVLRK Y +
Sbjct: 57 IPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRRCKEVIDAFNFKTTITNSAFVLRKSYLKM 116
Query: 61 LRDYEQIYFFRSQDS--WQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEARPASS 118
L ++E +Y+F++ S W+ + +A D Q E +P
Sbjct: 117 LFEFEHLYYFQAPLSTFWEKEKALKLLIEKSANRDKDSQ--------------ELKP--- 159
Query: 119 GGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATAHAV 178
G+ + G+IDGKFESGYL++ +GSE LKG+LY H P
Sbjct: 160 -GTVITGIIDGKFESGYLISTKVGSEKLKGMLY-------HISP---------------- 195
Query: 179 SGVQRRRRRKKSEIKRRDPAH-PKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELW 237
+ +R +KK++ + D PK R+GYNFF AEQ R+K + G+ + G +W
Sbjct: 196 ---ETKRGKKKAKSSQGDSHKPPKRQRTGYNFFVAEQSVRIKAENAGQKVSSPKNFGNMW 252
Query: 238 NKLKESEKAVYQEKALKDKERYRIEMEDYRERLKT 272
L ES++ VY EK+ +D +RY++E+ YR +++
Sbjct: 253 TNLSESDRKVYYEKSREDGKRYKMEILQYRSLMES 287
>gi|302771628|ref|XP_002969232.1| hypothetical protein SELMODRAFT_35551 [Selaginella moellendorffii]
gi|300162708|gb|EFJ29320.1| hypothetical protein SELMODRAFT_35551 [Selaginella moellendorffii]
Length = 284
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 148/269 (55%), Gaps = 24/269 (8%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P GK+ ++HRL+ EV+ +GG+ K+I+E++WK++ F+ P TN F LRK Y++
Sbjct: 40 LPRFHGKDFEIHRLYCEVSEQGGMLKVIREKKWKDIATAFDLPRNVTNPVFFLRKNYETF 99
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEARPASSGG 120
L YEQ+YF R + P ++ D S ++N A PASS G
Sbjct: 100 LHHYEQVYFHRKTGAHIPPPGPLPMPAPVSENIKDHDSNNDSSKLNQT---PANPASSLG 156
Query: 121 SPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATAHAVSG 180
V G I+GKFE GY VTV +GSE L+GV+Y P + +G
Sbjct: 157 HTVTGAIEGKFEHGYFVTVVVGSEKLRGVIYSLLDPPDKK------------------AG 198
Query: 181 VQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKL 240
+ R KK + KRR K R+GYNFF EQ +LK G+D E+S++IG+LW+KL
Sbjct: 199 NIKARPPKKEKRKRRVEG-IKSVRNGYNFFVGEQRQKLKG-GGGRD-EMSKIIGDLWSKL 255
Query: 241 KESEKAVYQEKALKDKERYRIEMEDYRER 269
E EK Y+E + +DKER+ E+E+ ++R
Sbjct: 256 SEEEKEPYREMSKRDKERFSREVEEKKQR 284
>gi|302754328|ref|XP_002960588.1| hypothetical protein SELMODRAFT_35546 [Selaginella moellendorffii]
gi|300171527|gb|EFJ38127.1| hypothetical protein SELMODRAFT_35546 [Selaginella moellendorffii]
Length = 284
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 141/269 (52%), Gaps = 24/269 (8%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P GK+ ++HRL+ EV+ +GG+ K+I+E++WK++ F+ P TN F LRK Y+
Sbjct: 40 LPRFHGKDFEIHRLYCEVSEQGGMLKVIREKKWKDIATAFDLPRNVTNPVFFLRKNYEKF 99
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEARPASSGG 120
L YEQ+YF R + P ++ D S ++N A PASS G
Sbjct: 100 LHHYEQVYFHRKTGAHIPPPGPLPMPAPVSENIKDHDSNNDSSKLNQT---PANPASSLG 156
Query: 121 SPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATAHAVSG 180
V G I+GKFE GY VTV +GSE L+GV+Y P + + V G
Sbjct: 157 HTVTGAIEGKFEHGYFVTVVVGSEKLRGVIYSLLDPPDKKAGNIKARPRKKEKRKRRVEG 216
Query: 181 VQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKL 240
+ K R+GYNFF EQ +LK G+D E+S++IG+LW+KL
Sbjct: 217 I-------------------KSVRNGYNFFVGEQRQKLKG-GGGRD-EMSKIIGDLWSKL 255
Query: 241 KESEKAVYQEKALKDKERYRIEMEDYRER 269
E EK Y+E + +DKER+ E+E+ ++R
Sbjct: 256 SEEEKEPYREMSKRDKERFSREVEEKKQR 284
>gi|384244917|gb|EIE18414.1| ARID-like protein [Coccomyxa subellipsoidea C-169]
Length = 300
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 134/270 (49%), Gaps = 33/270 (12%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +GG+ELDLH+L+ VTA GG ++I +++W++ F +P T T+ SF LRK Y L
Sbjct: 57 VPRVGGRELDLHQLYCNVTALGGCAQVIAKKQWRDAAESFKYPDTITSVSFTLRKAYSQL 116
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEARPASSGG 120
L D+EQIYFF P P Q + R + +++ A G
Sbjct: 117 LWDFEQIYFFEVSTI---PPVQLPLHPAVLQTKNSSRVTACDMRWDQSLMSHAV-----G 168
Query: 121 SPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATAHAVSG 180
+ +DG+F+ GY VTV IG E +G+LY P P S + + ++N
Sbjct: 169 TQGTVTLDGRFDCGYFVTVHIGREEFRGMLYYPPHEPAE---VSMSALESSNG------- 218
Query: 181 VQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWNK 239
RDP PKPNR+ +NFF A+ R K P + EI++ +GE+W
Sbjct: 219 --------------RDPNVPKPNRTPFNFFSADARPRAKAAFPELPQPEITKKVGEMWQT 264
Query: 240 LKESEKAVYQEKALKDKERYRIEMEDYRER 269
E +KA ++ A DK+RY E+E + R
Sbjct: 265 SSEEDKAPFKAMAQADKDRYLGELEAHNYR 294
>gi|357456009|ref|XP_003598285.1| AT-rich interactive domain-containing protein [Medicago truncatula]
gi|355487333|gb|AES68536.1| AT-rich interactive domain-containing protein [Medicago truncatula]
Length = 274
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 95/159 (59%), Gaps = 16/159 (10%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP IGGK LDLH LFVEVT+RGGIEK+I +R+WKEV FNF T T+ SF++RK Y SL
Sbjct: 63 IPTIGGKPLDLHHLFVEVTSRGGIEKVIVDRKWKEVIMSFNFRDTITSGSFMVRKTYLSL 122
Query: 61 LRDYEQIYFFRSQ------DSWQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEAR 114
L +EQ Y+F Q D+ G N+ + D S VQ I+
Sbjct: 123 LYHFEQAYYFCKQVPPSTPDALSGNVANSFTTNTDGAAIND--SPVQVSPIS-------- 172
Query: 115 PASSGGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQA 153
PA + GS V G ID KF+ GY+VTV +GSE LKGVLY
Sbjct: 173 PAQTLGSSVRGTIDMKFDDGYIVTVDLGSEQLKGVLYHV 211
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 28/39 (71%)
Query: 229 ISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYR 267
ISR IG + L + E+ VYQEK L+DKERYRIEM Y+
Sbjct: 226 ISRKIGFMRRNLTDPERQVYQEKRLRDKERYRIEMLKYK 264
>gi|388505080|gb|AFK40606.1| unknown [Medicago truncatula]
Length = 234
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 95/159 (59%), Gaps = 16/159 (10%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP IGGK LDLH LFVEVT+RGGIEK+I +R+WKEV FNF T T+ SF++RK Y SL
Sbjct: 63 IPTIGGKPLDLHHLFVEVTSRGGIEKVIVDRKWKEVIMSFNFRDTITSGSFMVRKTYLSL 122
Query: 61 LRDYEQIYFFRSQ------DSWQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEAR 114
L +EQ Y+F Q D+ G N+ + D S VQ I+
Sbjct: 123 LYHFEQAYYFCKQVPPSTPDALSGNVANSFTTNTDGAAIND--SPVQVSPIS-------- 172
Query: 115 PASSGGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQA 153
PA + GS V G ID KF+ GY+VTV +GSE LKGVLY
Sbjct: 173 PAQTLGSSVRGTIDMKFDDGYIVTVDLGSEQLKGVLYHV 211
>gi|294464050|gb|ADE77544.1| unknown [Picea sitchensis]
Length = 286
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 89/133 (66%), Gaps = 2/133 (1%)
Query: 141 IGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATAHAVSGVQRR--RRRKKSEIKRRDPA 198
+G+ ++GVLY P +S + N+ T S + R R+RK+ E+ R+DP
Sbjct: 2 VGTRKMRGVLYHVPPSGSRPQGASVSTFMNSRETDFRTSMLDHRLGRKRKRKEMSRKDPN 61
Query: 199 HPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKER 258
P+ N++GYNFFFAEQ ARLK + P KDR IS+MIG+LWN+L E +K+ YQE+ L DKER
Sbjct: 62 APRQNKTGYNFFFAEQRARLKSVQPDKDRAISKMIGDLWNRLSEDDKSPYQERGLVDKER 121
Query: 259 YRIEMEDYRERLK 271
Y+ EM +Y+ERL+
Sbjct: 122 YKREMREYKERLR 134
>gi|8778487|gb|AAF79495.1|AC002328_3 F20N2.8 [Arabidopsis thaliana]
Length = 315
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 124/245 (50%), Gaps = 59/245 (24%)
Query: 29 KERRWKEVTAIFNFPSTATNASFVLRKYYQSLLRDYEQIYFFRSQDSWQGPSTNAVSAPG 88
K+ + KEV FNF +T TN++FVLRK Y +L ++E +Y+F+ AP
Sbjct: 79 KKFKCKEVIDAFNFKTTITNSAFVLRKSYLKMLFEFEHLYYFQ--------------APL 124
Query: 89 TAQPSPDIQSAVQQPRINAAVLPEARPASSGGSPVIGVIDGKFESGYLVTVTIGSETLKG 148
+ D Q E +P G+ + G+IDGKFESGYL++ +GSE LKG
Sbjct: 125 STFWEKDSQ--------------ELKP----GTVITGIIDGKFESGYLISTKVGSEKLKG 166
Query: 149 VLYQAPQYPIHQVPSSYNVINNNNATAHAVSGVQRRRRRKKSEIKRRDPAHP-KPNRSGY 207
+LY H P + +R +KK++ + D P K R+GY
Sbjct: 167 MLY-------HISP-------------------ETKRGKKKAKSSQGDSHKPPKRQRTGY 200
Query: 208 NFFFAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYR 267
NFF AEQ R+K + G+ + G +W L ES++ VY EK+ +D +RY++E+ YR
Sbjct: 201 NFFVAEQSVRIKAENAGQKVSSPKNFGNMWTNLSESDRKVYYEKSREDGKRYKMEILQYR 260
Query: 268 ERLKT 272
+++
Sbjct: 261 SLMES 265
>gi|116787170|gb|ABK24397.1| unknown [Picea sitchensis]
Length = 350
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 104/168 (61%), Gaps = 3/168 (1%)
Query: 105 INAAVLPEARPASSGGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAP-QYPIHQVPS 163
++ A L P + G V G +D +F++GYLVTV +GSE LKGVLY P + + Q
Sbjct: 24 VDPAQLFGVDPGAYVGQTVTGAVDQRFDNGYLVTVVVGSEKLKGVLYHVPTESTVQQYAM 83
Query: 164 SYNVINNNNATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHP 223
+++N A + VQ ++RK+ I +RDP+ P+ +++GY FF+ EQ ARLK +
Sbjct: 84 VPGLMSNVGCDALGLE-VQVTKKRKE-RIPKRDPSAPRLSKTGYKFFYVEQCARLKKTYA 141
Query: 224 GKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLK 271
DREI + +LWNKL ++EK Y E++ +DK+R + ++ Y+ER+K
Sbjct: 142 QTDREIVTTVNDLWNKLSDNEKMQYIERSQQDKKRRKTQIMTYKERMK 189
>gi|356508167|ref|XP_003522831.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group B protein
10-like [Glycine max]
Length = 283
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 92/159 (57%), Gaps = 27/159 (16%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+ +GG LDLHRLFVEVT+RGGIEK+I +R+WKEV FNF T T+ASFV+RK Y S+
Sbjct: 75 VATVGGTSLDLHRLFVEVTSRGGIEKVIVDRKWKEVILTFNFKDTITSASFVVRKSYLSM 134
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQ--QPRINAAVLPE------ 112
L YEQ+Y+F Q G P+PD+ Q QP ++ +PE
Sbjct: 135 LYHYEQVYYFGRQ--------------GIPPPTPDLMIRGQSGQPY-SSTTIPEVAAVND 179
Query: 113 ----ARPASSGGSPVIGVIDGKFESGYLVTVTIGSETLK 147
+ P + V G ID KF+ GY+VTV +GSE LK
Sbjct: 180 SPVQSTPVQAHDDMVSGTIDAKFDGGYVVTVILGSEQLK 218
>gi|294464571|gb|ADE77795.1| unknown [Picea sitchensis]
Length = 342
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 106/181 (58%), Gaps = 1/181 (0%)
Query: 92 PSPDIQSAVQQPRINAAVLPEARPASSGGSPVIGVIDGKFESGYLVTVTIGSETLKGVLY 151
P QS ++ + + A L P +S G G IDGKF++GY VTV +GSE L G+LY
Sbjct: 10 PVDSAQSNKKRRKNDPAQLFGVDPGASVGHIATGAIDGKFDNGYFVTVVVGSEKLHGILY 69
Query: 152 QAP-QYPIHQVPSSYNVINNNNATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFF 210
P + Q + +I + + A+ + ++KK ++DP P+P + YNFF
Sbjct: 70 HVPTENASPQFANIPGLIKSVGSELDALGLQVQVTKKKKEIALKKDPNAPRPAKKSYNFF 129
Query: 211 FAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRERL 270
+AEQ A+LK H REI RM+ +LWN L ++EK Y E++ ++ERY+ EMEDY++RL
Sbjct: 130 YAEQCAKLKKFHSQTHREIGRMVADLWNNLSDNEKLPYIERSRHERERYKREMEDYKKRL 189
Query: 271 K 271
+
Sbjct: 190 R 190
>gi|295913254|gb|ADG57885.1| transcription factor [Lycoris longituba]
Length = 193
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 79/102 (77%), Gaps = 1/102 (0%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P+IGGK LDLH LFVEVT+RGG++K+I +R+WKEVT+ F FPST T+ASFVLRKYY SL
Sbjct: 82 VPMIGGKCLDLHHLFVEVTSRGGLQKVIGDRKWKEVTSAFTFPSTITSASFVLRKYYISL 141
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQ 102
L+ YEQ+Y+FR +DS PS +A ++ + P + + +++
Sbjct: 142 LQTYEQVYYFRKRDS-XLPSXDAKASRESEAPIATMSTMLKR 182
>gi|255646588|gb|ACU23768.1| unknown [Glycine max]
Length = 252
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 93/153 (60%), Gaps = 15/153 (9%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
I +GG LDLHRLFVEVT+RGGIEK+I +R+WKEV FNF T TNASF++RK Y S+
Sbjct: 72 ISTVGGTPLDLHRLFVEVTSRGGIEKVIVDRKWKEVILTFNFKDTITNASFMVRKSYLSM 131
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPG-TAQPS-----PDIQSAVQQPRINAAVLPEAR 114
L +EQ+Y+F Q P+T + G + QP P++ + P ++
Sbjct: 132 LYHFEQVYYFGRQGI--PPTTPDLMIRGQSCQPYSSTTIPEVAAVNDSPV-------QST 182
Query: 115 PASSGGSPVIGVIDGKFESGYLVTVTIGSETLK 147
P + V G ID KF+ GY+VTVT+GSE L+
Sbjct: 183 PVQAHDDMVSGTIDAKFDVGYVVTVTLGSEQLQ 215
>gi|294462342|gb|ADE76720.1| unknown [Picea sitchensis]
Length = 113
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 68/93 (73%)
Query: 192 IKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEK 251
+ R+DP P+ NRSGY FFFAEQ A+LK P K+REIS+MIG+LWN+L E +K+ YQE+
Sbjct: 1 MSRKDPNAPRQNRSGYTFFFAEQRAKLKSTEPDKNREISKMIGDLWNRLPEDKKSPYQER 60
Query: 252 ALKDKERYRIEMEDYRERLKTGQVISDAIPLQQ 284
L+DKERY+ EM +YRER++ +D L Q
Sbjct: 61 GLQDKERYKREMREYRERIRFNGEQADGANLPQ 93
>gi|388490562|gb|AFK33347.1| unknown [Medicago truncatula]
Length = 185
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 55/73 (75%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP IGGK LDLH LFVEVT+RGGIEK+I +R+WKEV FNF T T+ SF++RK Y SL
Sbjct: 63 IPTIGGKSLDLHHLFVEVTSRGGIEKVIVDRKWKEVIMSFNFRDTITSGSFMVRKTYLSL 122
Query: 61 LRDYEQIYFFRSQ 73
L +EQ Y+F Q
Sbjct: 123 LYHFEQAYYFCKQ 135
>gi|384253862|gb|EIE27336.1| hypothetical protein COCSUDRAFT_45820 [Coccomyxa subellipsoidea
C-169]
Length = 460
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 50/69 (72%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP++ G+ELDLH L+ +VTA GG+E +I ++W EV+ F FP + T+ SF LRK Y L
Sbjct: 56 IPMVSGRELDLHLLYKQVTALGGLEAVITAKKWTEVSQPFQFPPSFTSKSFTLRKMYSRL 115
Query: 61 LRDYEQIYF 69
L DYEQ+Y+
Sbjct: 116 LHDYEQVYY 124
>gi|326911459|ref|XP_003202076.1| PREDICTED: AT-rich interactive domain-containing protein 2-like
[Meleagris gallopavo]
Length = 1831
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 50/74 (67%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP++GGKELDLH L+ VT GG K+ ++ +W E+ FNFP + +NA+F L++YY
Sbjct: 37 IPVVGGKELDLHALYTRVTTLGGFGKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQD 74
L YE+++ F +D
Sbjct: 97 LEKYEKVHHFGEED 110
>gi|224093694|ref|XP_002196572.1| PREDICTED: AT-rich interactive domain-containing protein 2
[Taeniopygia guttata]
Length = 1825
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 50/74 (67%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP++GGKELDLH L+ VT GG K+ ++ +W E+ FNFP + +NA+F L++YY
Sbjct: 37 IPVVGGKELDLHALYTRVTTLGGFGKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQD 74
L YE+++ F +D
Sbjct: 97 LEKYEKVHHFGEED 110
>gi|118082251|ref|XP_416046.2| PREDICTED: AT-rich interactive domain-containing protein 2 [Gallus
gallus]
Length = 1830
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 50/74 (67%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP++GGKELDLH L+ VT GG K+ ++ +W E+ FNFP + +NA+F L++YY
Sbjct: 37 IPVVGGKELDLHALYTRVTTLGGFGKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQD 74
L YE+++ F +D
Sbjct: 97 LEKYEKVHHFGEED 110
>gi|145479355|ref|XP_001425700.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392772|emb|CAK58302.1| unnamed protein product [Paramecium tetraurelia]
Length = 570
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 53/76 (69%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP IGG+EL++ +L+ VT RGG++ + + WKE+ F+FP+T T+ASF LR +YQ L
Sbjct: 27 IPQIGGRELEVFKLYKAVTKRGGLKVVSANKLWKEIVDQFSFPATCTSASFTLRNHYQKL 86
Query: 61 LRDYEQIYFFRSQDSW 76
L YEQ YFF +D +
Sbjct: 87 LLAYEQKYFFGKEDGY 102
>gi|327272934|ref|XP_003221239.1| PREDICTED: AT-rich interactive domain-containing protein 2-like
[Anolis carolinensis]
Length = 1839
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 49/74 (66%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP++GG+ELDLH L+ VT GG K+ ++ +W E+ FNFP + +NA+F L++YY
Sbjct: 37 IPVVGGRELDLHALYTRVTTLGGFGKVSEKNQWGEIIEEFNFPRSCSNAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQD 74
L YE+++ F D
Sbjct: 97 LEKYEKVHHFGEDD 110
>gi|397510864|ref|XP_003825805.1| PREDICTED: LOW QUALITY PROTEIN: AT-rich interactive
domain-containing protein 2 [Pan paniscus]
Length = 1835
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +GGKELDLH L+ VT GG K+ ++ +W E+ FNFP + +NA+F L++YY
Sbjct: 37 IPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQD 74
L YE+++ F D
Sbjct: 97 LEKYEKVHHFGEDD 110
>gi|392349703|ref|XP_345868.4| PREDICTED: AT-rich interactive domain-containing protein 2 [Rattus
norvegicus]
Length = 1826
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +GGKELDLH L+ VT GG K+ ++ +W E+ FNFP + +NA+F L++YY
Sbjct: 37 IPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQD 74
L YE+++ F D
Sbjct: 97 LEKYEKVHHFGEDD 110
>gi|119578293|gb|EAW57889.1| AT rich interactive domain 2 (ARID, RFX-like), isoform CRA_b [Homo
sapiens]
Length = 1793
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +GGKELDLH L+ VT GG K+ ++ +W E+ FNFP + +NA+F L++YY
Sbjct: 37 IPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQD 74
L YE+++ F D
Sbjct: 97 LEKYEKVHHFGEDD 110
>gi|301783599|ref|XP_002927214.1| PREDICTED: AT-rich interactive domain-containing protein 2-like
[Ailuropoda melanoleuca]
gi|281351998|gb|EFB27582.1| hypothetical protein PANDA_016976 [Ailuropoda melanoleuca]
Length = 1836
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +GGKELDLH L+ VT GG K+ ++ +W E+ FNFP + +NA+F L++YY
Sbjct: 37 IPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQD 74
L YE+++ F D
Sbjct: 97 LEKYEKVHHFGEDD 110
>gi|262231796|ref|NP_780460.3| AT rich interactive domain 2 (ARID, RFX-like) [Mus musculus]
Length = 1828
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +GGKELDLH L+ VT GG K+ ++ +W E+ FNFP + +NA+F L++YY
Sbjct: 37 IPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQD 74
L YE+++ F D
Sbjct: 97 LEKYEKVHHFGEDD 110
>gi|417406770|gb|JAA50029.1| Putative transcriptional regulator [Desmodus rotundus]
Length = 1835
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +GGKELDLH L+ VT GG K+ ++ +W E+ FNFP + +NA+F L++YY
Sbjct: 37 IPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQD 74
L YE+++ F D
Sbjct: 97 LEKYEKVHHFGEDD 110
>gi|297691617|ref|XP_002823175.1| PREDICTED: AT-rich interactive domain-containing protein 2 [Pongo
abelii]
Length = 1836
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +GGKELDLH L+ VT GG K+ ++ +W E+ FNFP + +NA+F L++YY
Sbjct: 37 IPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQD 74
L YE+++ F D
Sbjct: 97 LEKYEKVHHFGEDD 110
>gi|119578295|gb|EAW57891.1| AT rich interactive domain 2 (ARID, RFX-like), isoform CRA_d [Homo
sapiens]
Length = 1788
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +GGKELDLH L+ VT GG K+ ++ +W E+ FNFP + +NA+F L++YY
Sbjct: 37 IPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQD 74
L YE+++ F D
Sbjct: 97 LEKYEKVHHFGEDD 110
>gi|56549668|ref|NP_689854.2| AT-rich interactive domain-containing protein 2 [Homo sapiens]
gi|73921721|sp|Q68CP9.2|ARID2_HUMAN RecName: Full=AT-rich interactive domain-containing protein 2;
Short=ARID domain-containing protein 2; AltName:
Full=BRG1-associated factor 200; Short=BAF200; AltName:
Full=Zinc finger protein with activation potential;
AltName: Full=Zipzap/p200
gi|119578294|gb|EAW57890.1| AT rich interactive domain 2 (ARID, RFX-like), isoform CRA_c [Homo
sapiens]
gi|162317620|gb|AAI56212.1| AT rich interactive domain 2 (ARID, RFX-like) [synthetic construct]
gi|225000202|gb|AAI72461.1| AT rich interactive domain 2 (ARID, RFX-like) [synthetic construct]
gi|261858004|dbj|BAI45524.1| AT rich interactive domain containing protein 2 [synthetic
construct]
Length = 1835
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +GGKELDLH L+ VT GG K+ ++ +W E+ FNFP + +NA+F L++YY
Sbjct: 37 IPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQD 74
L YE+++ F D
Sbjct: 97 LEKYEKVHHFGEDD 110
>gi|426372262|ref|XP_004053045.1| PREDICTED: AT-rich interactive domain-containing protein 2 [Gorilla
gorilla gorilla]
Length = 1834
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +GGKELDLH L+ VT GG K+ ++ +W E+ FNFP + +NA+F L++YY
Sbjct: 37 IPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQD 74
L YE+++ F D
Sbjct: 97 LEKYEKVHHFGEDD 110
>gi|431901419|gb|ELK08445.1| AT-rich interactive domain-containing protein 2 [Pteropus alecto]
Length = 1836
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +GGKELDLH L+ VT GG K+ ++ +W E+ FNFP + +NA+F L++YY
Sbjct: 37 IPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQD 74
L YE+++ F D
Sbjct: 97 LEKYEKVHHFGEDD 110
>gi|297474617|ref|XP_002687369.1| PREDICTED: AT-rich interactive domain-containing protein 2 [Bos
taurus]
gi|296487772|tpg|DAA29885.1| TPA: brahma associated protein 170kD-like [Bos taurus]
Length = 1834
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +GGKELDLH L+ VT GG K+ ++ +W E+ FNFP + +NA+F L++YY
Sbjct: 37 IPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQD 74
L YE+++ F D
Sbjct: 97 LEKYEKVHHFGEDD 110
>gi|73334458|gb|AAZ74794.1| zipzap protein [Homo sapiens]
Length = 1835
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +GGKELDLH L+ VT GG K+ ++ +W E+ FNFP + +NA+F L++YY
Sbjct: 37 IPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQD 74
L YE+++ F D
Sbjct: 97 LEKYEKVHHFGEDD 110
>gi|426224635|ref|XP_004006474.1| PREDICTED: AT-rich interactive domain-containing protein 2 [Ovis
aries]
Length = 1835
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +GGKELDLH L+ VT GG K+ ++ +W E+ FNFP + +NA+F L++YY
Sbjct: 37 IPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQD 74
L YE+++ F D
Sbjct: 97 LEKYEKVHHFGEDD 110
>gi|51491251|emb|CAH18689.1| hypothetical protein [Homo sapiens]
Length = 1756
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +GGKELDLH L+ VT GG K+ ++ +W E+ FNFP + +NA+F L++YY
Sbjct: 10 IPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRY 69
Query: 61 LRDYEQIYFFRSQD 74
L YE+++ F D
Sbjct: 70 LEKYEKVHHFGEDD 83
>gi|126340157|ref|XP_001367064.1| PREDICTED: AT-rich interactive domain-containing protein 2
[Monodelphis domestica]
Length = 1836
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +GGKELDLH L+ VT GG K+ ++ +W E+ FNFP + +NA+F L++YY
Sbjct: 37 IPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQD 74
L YE+++ F D
Sbjct: 97 LEKYEKVHHFGEDD 110
>gi|351700357|gb|EHB03276.1| AT-rich interactive domain-containing protein 2 [Heterocephalus
glaber]
Length = 1815
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +GGKELDLH L+ VT GG K+ ++ +W E+ FNFP + +NA+F L++YY
Sbjct: 37 IPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQD 74
L YE+++ F D
Sbjct: 97 LEKYEKVHHFGEDD 110
>gi|58012117|gb|AAU20329.2| ARID2 [Homo sapiens]
Length = 1113
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +GGKELDLH L+ VT GG K+ ++ +W E+ FNFP + +NA+F L++YY
Sbjct: 37 IPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQD 74
L YE+++ F D
Sbjct: 97 LEKYEKVHHFGEDD 110
>gi|12840712|dbj|BAB24929.1| unnamed protein product [Mus musculus]
gi|148672297|gb|EDL04244.1| mCG141061 [Mus musculus]
Length = 145
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +GGKELDLH L+ VT GG K+ ++ +W E+ FNFP + +NA+F L++YY
Sbjct: 37 IPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPS 93
L YE+++ F D P P A PS
Sbjct: 97 LEKYEKVHHFGEDDDEVPPGNPKPQLPIGAIPS 129
>gi|348536584|ref|XP_003455776.1| PREDICTED: AT-rich interactive domain-containing protein 2
[Oreochromis niloticus]
Length = 1690
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+GGKELDL+ L++ V + GG K+ + +W E+ FNFP + +NA+F L++YY
Sbjct: 37 IPIVGGKELDLNALYIRVVSLGGFAKVSDKNQWIELGEEFNFPRSCSNAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPS 93
L YE+++ F D P S P A P+
Sbjct: 97 LEKYEKVHHFGEDDEEAQPGNPKASLPIGAIPN 129
>gi|146181973|ref|XP_001023719.2| ARID/BRIGHT DNA binding domain containing protein [Tetrahymena
thermophila]
gi|146143978|gb|EAS03474.2| ARID/BRIGHT DNA binding domain containing protein [Tetrahymena
thermophila SB210]
Length = 651
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 47/83 (56%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP IGG+ELD +L+ V RGG + + + WKE+ F FPST T+ASF LR +Y
Sbjct: 28 IPQIGGRELDFFKLYKAVIKRGGAQAVSNNKMWKEIVNEFGFPSTCTSASFTLRNHYTRF 87
Query: 61 LRDYEQIYFFRSQDSWQGPSTNA 83
L YEQ YFF D P A
Sbjct: 88 LLGYEQKYFFHKGDEEAMPVLQA 110
>gi|410927538|ref|XP_003977198.1| PREDICTED: AT-rich interactive domain-containing protein 2-like,
partial [Takifugu rubripes]
Length = 1416
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 54/93 (58%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +GGKELDL+ L++ V + GG K+ ++ +W E+ FNFP +NA+F L++YY
Sbjct: 37 IPFVGGKELDLNALYIRVVSLGGFAKVSEKNQWMELGEEFNFPRNCSNAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPS 93
L YE+++ F D P S P A P+
Sbjct: 97 LEKYEKVHHFGEDDEESQPGNPKASLPVGAIPN 129
>gi|119578292|gb|EAW57888.1| AT rich interactive domain 2 (ARID, RFX-like), isoform CRA_a [Homo
sapiens]
Length = 500
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +GGKELDLH L+ VT GG K+ ++ +W E+ FNFP + +NA+F L++YY
Sbjct: 37 IPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPS 93
L YE+++ F D P P A PS
Sbjct: 97 LEKYEKVHHFGEDDDEVPPGNPKPQLPIGAIPS 129
>gi|118150542|ref|NP_001071231.1| AT-rich interactive domain-containing protein 2 [Danio rerio]
gi|117558565|gb|AAI27386.1| AT rich interactive domain 2 (ARID, RFX-like) [Danio rerio]
Length = 1570
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P++GGKELDL L+V V + GG K+ + +W E+ F FP + +NA+FVL++YY
Sbjct: 37 VPVVGGKELDLGALYVRVVSLGGFAKVSDKNQWVELVEDFQFPRSCSNAAFVLKQYYLRY 96
Query: 61 LRDYEQIYFFRSQDSWQGP 79
L YE+++ F +D + P
Sbjct: 97 LEKYEKVHHFGEEDEEEQP 115
>gi|301606475|ref|XP_002932851.1| PREDICTED: AT-rich interactive domain-containing protein 2-like
[Xenopus (Silurana) tropicalis]
Length = 1815
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +GG+ELDLH L+ VT GG K+ ++ +W E+ F+FP NA+F L++YY
Sbjct: 37 IPAVGGRELDLHALYTRVTTLGGFAKVSEKNQWGEIGEDFSFPRGCANAAFALKQYYLRY 96
Query: 61 LRDYEQIYFFRSQD 74
L YE+++ F D
Sbjct: 97 LEKYEKVHHFGEDD 110
>gi|357492259|ref|XP_003616418.1| hypothetical protein MTR_5g080030 [Medicago truncatula]
gi|355517753|gb|AES99376.1| hypothetical protein MTR_5g080030 [Medicago truncatula]
Length = 412
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 109/250 (43%), Gaps = 59/250 (23%)
Query: 9 LDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLLRDYEQIY 68
LDL+ ++EVT RGG ++ +E++W EV + L K Y+ LL +E +Y
Sbjct: 70 LDLYLFYLEVTKRGGYHQVDQEKKWGEVVSALKLEGNNATLCDQLEKLYKELLYKFETLY 129
Query: 69 FFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEARPASSGGSPVIGVID 128
F+RS P+T + + P + + + +++ Q + L + + S + G+
Sbjct: 130 FYRS------PATGSNTGP--VERNQNSTTSLSQLMDDQDYLKARKISEHYSSQITGIGY 181
Query: 129 GKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATAHAVSGVQRRRRRK 188
+F+ V+ QAP S + +++R+
Sbjct: 182 QEFQ----------------VVQQAP------------------------SKNKEKKKRR 201
Query: 189 KSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAV 247
+ I +SGYN F ++ ARLK HP R+I M + WNKL ++EK
Sbjct: 202 GAPI----------GQSGYNIFLKQECARLKANHPDVGGRKIIDMAIDAWNKLSDNEKRP 251
Query: 248 YQEKALKDKE 257
Y+E ++K KE
Sbjct: 252 YEEASMKIKE 261
>gi|452819379|gb|EME26439.1| ARID/BRIGHT DNA binding domain-containing protein [Galdieria
sulphuraria]
Length = 500
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 47/69 (68%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G KELDL RLF EVT+RGG++ +I +++WKEV PS+ T++ F LR +Y
Sbjct: 223 LPTLGFKELDLFRLFKEVTSRGGVDYVIAKKQWKEVADALGLPSSCTDSGFRLRLHYIRY 282
Query: 61 LRDYEQIYF 69
L YE+ YF
Sbjct: 283 LEPYERTYF 291
>gi|328769811|gb|EGF79854.1| hypothetical protein BATDEDRAFT_89329 [Batrachochytrium
dendrobatidis JAM81]
Length = 213
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLL 61
P++GGK LDL +++ V GG E++ ER WK++ F+ P+T TN++FV ++ YQ L
Sbjct: 55 PVLGGKNLDLLKIYTMVIEAGGYEQVTHERGWKKIGIPFDLPTTCTNSAFVFKQIYQKYL 114
Query: 62 RDYEQIYFFRSQDSWQGPS----TNAVSAPGTAQPSPDIQSAVQQPRINAAVLP 111
YE I+F + S GP V AP P + A PRI+ P
Sbjct: 115 YCYELIHFQTHRSSITGPDGLPPGVVVRAPSAIPLVPTV--AAVPPRIDVHGFP 166
>gi|340507679|gb|EGR33604.1| hypothetical protein IMG5_048210 [Ichthyophthirius multifiliis]
Length = 479
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 45/75 (60%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP IGG+ELD +L+ V RGG + + + WKE+ F FPST T+ASF LR +YQ
Sbjct: 34 IPQIGGRELDFFKLYKSVIRRGGAQAVSNNKMWKEIVNEFGFPSTCTSASFTLRNHYQKY 93
Query: 61 LRDYEQIYFFRSQDS 75
L YE YFF S
Sbjct: 94 LLGYEFKYFFHQLQS 108
>gi|320163317|gb|EFW40216.1| hypothetical protein CAOG_00741 [Capsaspora owczarzaki ATCC 30864]
Length = 994
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P GG ELDL++L++ VTA GG E + + W+E+ + P T TN+ FVL+ YY L
Sbjct: 33 VPKAGGHELDLYKLYLAVTAHGGFESVTGLKLWREIGREIDLPGTVTNSPFVLKMYYAKL 92
Query: 61 LRDYEQI-YFFRSQDS--WQ 77
L +YE + Y+ R DS WQ
Sbjct: 93 LIEYELVNYYGRPIDSIPWQ 112
>gi|156378603|ref|XP_001631231.1| predicted protein [Nematostella vectensis]
gi|156218268|gb|EDO39168.1| predicted protein [Nematostella vectensis]
Length = 208
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 48/70 (68%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +GG+ LDL L+ +VT GG K+ ++++W+++ FN PST TNA+F LR++Y
Sbjct: 37 LPWLGGQFLDLFLLYKKVTDHGGWVKVTEDKKWRDIAEFFNLPSTCTNAAFALRQHYARY 96
Query: 61 LRDYEQIYFF 70
L YE+I FF
Sbjct: 97 LEAYERINFF 106
>gi|403345100|gb|EJY71909.1| ARID/BRIGHT DNA binding domain containing protein [Oxytricha
trifallax]
Length = 673
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P IGGKELDL +L+ V RGG +++ + WKE+ F PS+ T+ASF LR +Y
Sbjct: 42 VPSIGGKELDLCKLYKAVIQRGGSQRVSNNKLWKEIVNEFEIPSSCTSASFTLRNHYNKC 101
Query: 61 LRDYEQIYFF 70
L YE+ YF
Sbjct: 102 LLQYEKKYFL 111
>gi|452823220|gb|EME30232.1| ARID/BRIGHT DNA binding domain containing protein [Galdieria
sulphuraria]
Length = 610
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +GG LD+ L+ EV RGG++ +I R +KE++ I P T T A+FVLR+ Y+ +
Sbjct: 71 IPTLGGFTLDVFILYQEVVRRGGVQHVIDNREFKEISKILRLPKTCTAAAFVLRESYEKI 130
Query: 61 LRDYEQIYFF 70
L YEQ + F
Sbjct: 131 LYFYEQKHVF 140
>gi|391344928|ref|XP_003746746.1| PREDICTED: AT-rich interactive domain-containing protein 2-like
[Metaseiulus occidentalis]
Length = 1199
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKII-KERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
PI+ G+ELDLH L+ VTA GG KI K RW E++ FP N + VLR+ YQ
Sbjct: 33 PIVCGQELDLHTLYKSVTAVGGASKINEKPERWYEISHQIRFPDRCPNGTLVLRRMYQRY 92
Query: 61 LRDYEQIYFF 70
L YE++ F
Sbjct: 93 LSTYEKVTFL 102
>gi|303283986|ref|XP_003061284.1| JmjN/JmjC protein [Micromonas pusilla CCMP1545]
gi|226457635|gb|EEH54934.1| JmjN/JmjC protein [Micromonas pusilla CCMP1545]
Length = 2683
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLL 61
P+ GGK+LDL L+ VT+RGG E K ++W++V + P++AT+A+ VLR+ Y+ L
Sbjct: 104 PVFGGKKLDLQALYDTVTSRGGFEAACKGKQWRDVARAMDVPASATSAALVLRQLYEKWL 163
Query: 62 RDYEQ 66
+EQ
Sbjct: 164 LRFEQ 168
>gi|449017728|dbj|BAM81130.1| similar to DNA binding protein, dead ringer [Cyanidioschyzon
merolae strain 10D]
Length = 858
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +GG LDL++LFV + RGG++K I R +K V P T T A+F LR+ Y+ L
Sbjct: 141 LPTLGGAPLDLYKLFVLIIQRGGLQKTIDARDFKNVAKELALPPTCTAAAFALRQAYERL 200
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSP 94
YEQ + F + P AV + + P P
Sbjct: 201 AYVYEQKFLFNREPHEAPPIRQAVKSSMSFVPRP 234
>gi|198436052|ref|XP_002127335.1| PREDICTED: similar to AT rich interactive domain 2 (ARID, RFX-like)
[Ciona intestinalis]
Length = 1197
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLL 61
P + GK LDLH L+ VT+ GG K+ ++ W + A +NFPS +++ S+ LR YQ L
Sbjct: 32 PRLAGKVLDLHDLYNRVTSLGGYNKVTEKELWDDFLAEYNFPSCSSSLSYGLRAVYQRFL 91
Query: 62 RDYEQIYFF 70
+YE+++ F
Sbjct: 92 EEYEKVHHF 100
>gi|324511474|gb|ADY44776.1| AT-rich interactive domain-containing protein cfi-1 [Ascaris suum]
Length = 526
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ V GG+ +II ++ W+E+T N PS+ T+A+F LR YQ
Sbjct: 227 IPIMAKQVLDLYELYRLVVQHGGLVEIINKKLWREITKGLNLPSSITSAAFTLRTQYQKF 286
Query: 61 LRDYE 65
L DYE
Sbjct: 287 LYDYE 291
>gi|255079372|ref|XP_002503266.1| JmjN/JmjC protein [Micromonas sp. RCC299]
gi|226518532|gb|ACO64524.1| JmjN/JmjC protein [Micromonas sp. RCC299]
Length = 2663
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLL 61
P+ GGK+LDL L+ VT RGG + + + + W+++ + + P+T T+A+ LR YQ L
Sbjct: 105 PVYGGKKLDLQALYDNVTQRGGFDAVCRAKGWRDMARVMDTPATVTSAAMALRALYQKWL 164
Query: 62 RDYEQ 66
D+EQ
Sbjct: 165 LDFEQ 169
>gi|159471167|ref|XP_001693728.1| HMGB protein [Chlamydomonas reinhardtii]
gi|158283231|gb|EDP08982.1| HMGB protein [Chlamydomonas reinhardtii]
Length = 513
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P + G+ELDL+ L+ +V GG+ ++I E++W EV FNF + T+ S+ +R+ Y L
Sbjct: 66 VPTVSGQELDLYLLYKQVCEYGGVLQVISEKKWSEVCDPFNFSKSFTSKSWTIRRLYCQL 125
Query: 61 LRDYEQ 66
L YEQ
Sbjct: 126 LWHYEQ 131
>gi|256075036|ref|XP_002573827.1| at-rich interactive domain 3 arid3 [Schistosoma mansoni]
Length = 748
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ LF V ARGG+ ++I ++ W+E+T N PS+ T+A+F LR Y
Sbjct: 76 IPIMAKQVLDLYELFQLVVARGGLVEVINKKLWREITKGLNLPSSITSAAFTLRTQYMKY 135
Query: 61 LRDYE 65
L YE
Sbjct: 136 LYPYE 140
>gi|353231376|emb|CCD77794.1| putative at-rich interactive domain 3, arid3 [Schistosoma mansoni]
Length = 748
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ LF V ARGG+ ++I ++ W+E+T N PS+ T+A+F LR Y
Sbjct: 76 IPIMAKQVLDLYELFQLVVARGGLVEVINKKLWREITKGLNLPSSITSAAFTLRTQYMKY 135
Query: 61 LRDYE 65
L YE
Sbjct: 136 LYPYE 140
>gi|25145754|ref|NP_492644.2| Protein CFI-1 [Caenorhabditis elegans]
gi|74956478|sp|O02326.3|CFI1_CAEEL RecName: Full=AT-rich interactive domain-containing protein cfi-1;
AltName: Full=ARID domain-containing protein CFI-1
gi|19702473|gb|AAL93258.1|AF487547_1 ARID DNA binding protein CFI-1 [Caenorhabditis elegans]
gi|21615487|emb|CAB03395.3| Protein CFI-1 [Caenorhabditis elegans]
Length = 467
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ V GG+ +II ++ W+E+T N PS+ T+A+F LR YQ
Sbjct: 205 IPIMAKQVLDLYELYRLVVQHGGLVEIINKKLWREITKGLNLPSSITSAAFTLRTQYQKY 264
Query: 61 LRDYE 65
L DYE
Sbjct: 265 LYDYE 269
>gi|268564785|ref|XP_002639227.1| C. briggsae CBR-CFI-1 protein [Caenorhabditis briggsae]
Length = 268
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ V GG+ +II ++ W+E+T N PS+ T+A+F LR YQ
Sbjct: 7 IPIMAKQVLDLYELYRLVVQHGGLVEIINKKLWREITKGLNLPSSITSAAFTLRTQYQKY 66
Query: 61 LRDYE 65
L DYE
Sbjct: 67 LYDYE 71
>gi|341886860|gb|EGT42795.1| CBN-CFI-1 protein [Caenorhabditis brenneri]
Length = 467
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ V GG+ +II ++ W+E+T N PS+ T+A+F LR YQ
Sbjct: 206 IPIMAKQVLDLYELYRLVVQHGGLVEIINKKLWREITKGLNLPSSITSAAFTLRTQYQKY 265
Query: 61 LRDYE 65
L DYE
Sbjct: 266 LYDYE 270
>gi|341898354|gb|EGT54289.1| hypothetical protein CAEBREN_31184 [Caenorhabditis brenneri]
Length = 467
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ V GG+ +II ++ W+E+T N PS+ T+A+F LR YQ
Sbjct: 206 IPIMAKQVLDLYELYRLVVQHGGLVEIINKKLWREITKGLNLPSSITSAAFTLRTQYQKY 265
Query: 61 LRDYE 65
L DYE
Sbjct: 266 LYDYE 270
>gi|308493966|ref|XP_003109172.1| CRE-CFI-1 protein [Caenorhabditis remanei]
gi|308246585|gb|EFO90537.1| CRE-CFI-1 protein [Caenorhabditis remanei]
Length = 499
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ V GG+ +II ++ W+E+T N PS+ T+A+F LR YQ
Sbjct: 221 IPIMAKQVLDLYELYRLVVQHGGLVEIINKKLWREITKGLNLPSSITSAAFTLRTQYQKY 280
Query: 61 LRDYE 65
L DYE
Sbjct: 281 LYDYE 285
>gi|118406561|gb|ABK81634.1| deadringer transcription factor [Patiria miniata]
Length = 247
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ LF VTA+GG+ ++I +++W+E+T N P++ T+A+F LR Y
Sbjct: 112 IPIMAKQVLDLYELFNLVTAKGGLVEVINKKQWREITKGLNLPASITSAAFTLRTQYMKY 171
Query: 61 LRDYE 65
L YE
Sbjct: 172 LYPYE 176
>gi|358341060|dbj|GAA48830.1| phosphatidate cytidylyltransferase [Clonorchis sinensis]
Length = 1538
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ LF V ARGG+ ++I ++ W+E+T N PS+ T+A+F LR Y
Sbjct: 621 IPIMAKQVLDLYELFQLVVARGGLVEVINKKLWREITKGLNLPSSITSAAFTLRTQYMKY 680
Query: 61 LRDYE 65
L YE
Sbjct: 681 LYPYE 685
>gi|313239581|emb|CBY14483.1| unnamed protein product [Oikopleura dioica]
Length = 622
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+RL+ V RGG+ ++I ++ W+E+T N PS+ T+A+F LR Y
Sbjct: 229 IPIMAKQVLDLYRLYKLVVERGGLVEVINKKIWREITKGLNLPSSITSAAFTLRTQYMKY 288
Query: 61 LRDYE 65
L YE
Sbjct: 289 LYPYE 293
>gi|444729872|gb|ELW70275.1| AT-rich interactive domain-containing protein 3C [Tupaia chinensis]
Length = 607
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 13/95 (13%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 137 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 196
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPD 95
L YE T A+S+PG Q + D
Sbjct: 197 LYPYEC-------------ETRALSSPGELQAAID 218
>gi|313222750|emb|CBY41730.1| unnamed protein product [Oikopleura dioica]
Length = 443
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+RL+ V RGG+ ++I ++ W+E+T N PS+ T+A+F LR Y
Sbjct: 50 IPIMAKQVLDLYRLYKLVVERGGLVEVINKKIWREITKGLNLPSSITSAAFTLRTQYMKY 109
Query: 61 LRDYE 65
L YE
Sbjct: 110 LYPYE 114
>gi|290974948|ref|XP_002670206.1| predicted protein [Naegleria gruberi]
gi|284083762|gb|EFC37462.1| predicted protein [Naegleria gruberi]
Length = 689
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 45/67 (67%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +GG+ L++++L+++V RGG E + + ++W EV + P T T+AS+ L+ YYQ
Sbjct: 52 LPQLGGRRLNVYKLWLQVWGRGGYEAVCENKQWTEVRDSYQVPKTCTSASYSLKMYYQKW 111
Query: 61 LRDYEQI 67
L +EQ+
Sbjct: 112 LYSFEQV 118
>gi|149634421|ref|XP_001507169.1| PREDICTED: AT-rich interactive domain-containing protein 3A-like
[Ornithorhynchus anatinus]
Length = 354
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 15 IPIMAKQVLDLYMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 74
Query: 61 LRDYE 65
L YE
Sbjct: 75 LYPYE 79
>gi|148231984|ref|NP_001085467.1| AT-rich interactive domain-containing protein 3A [Xenopus laevis]
gi|82184626|sp|Q6GQD7.1|ARI3A_XENLA RecName: Full=AT-rich interactive domain-containing protein 3A;
Short=ARID domain-containing protein 3A; AltName:
Full=Bright homolog; AltName: Full=Dead ringer-like
protein 1
gi|49119116|gb|AAH72808.1| MGC80148 protein [Xenopus laevis]
gi|58429893|gb|AAW78333.1| Dril1 [Xenopus laevis]
Length = 539
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 233 IPIMAKQVLDLYMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 292
Query: 61 LRDYE 65
L YE
Sbjct: 293 LYPYE 297
>gi|148673442|gb|EDL05389.1| AT rich interactive domain 3C (Bright like) [Mus musculus]
Length = 161
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 13/95 (13%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 69 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 128
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPD 95
L YE T A+S+PG Q + D
Sbjct: 129 LYPYEC-------------ETRALSSPGELQAAID 150
>gi|58331845|ref|NP_001011106.1| AT-rich interactive domain-containing protein 3A [Xenopus
(Silurana) tropicalis]
gi|82180257|sp|Q5XGD9.1|ARI3A_XENTR RecName: Full=AT-rich interactive domain-containing protein 3A;
Short=ARID domain-containing protein 3A; AltName:
Full=Bright homolog; AltName: Full=Dead ringer-like
protein 1
gi|54038256|gb|AAH84503.1| AT rich interactive domain 3A (BRIGHT-like) [Xenopus (Silurana)
tropicalis]
gi|89267830|emb|CAJ82754.1| at rich interactive domain 3a (bright like) [Xenopus (Silurana)
tropicalis]
Length = 541
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 236 IPIMAKQVLDLYMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 295
Query: 61 LRDYE 65
L YE
Sbjct: 296 LYPYE 300
>gi|126323677|ref|XP_001374625.1| PREDICTED: AT-rich interactive domain-containing protein 3A
[Monodelphis domestica]
Length = 627
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 276 IPIMAKQVLDLYMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 335
Query: 61 LRDYE 65
L YE
Sbjct: 336 LYPYE 340
>gi|311265547|ref|XP_003130719.1| PREDICTED: AT-rich interactive domain-containing protein 3C-like
[Sus scrofa]
Length = 416
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 13/95 (13%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 139 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 198
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPD 95
L YE T A+S+PG Q + D
Sbjct: 199 LYPYEC-------------ETQALSSPGELQAAID 220
>gi|291383057|ref|XP_002708063.1| PREDICTED: AT rich interactive domain 3C (BRIGHT- like)
[Oryctolagus cuniculus]
Length = 410
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 135 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 194
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQ 91
L YE T A+S+PG Q
Sbjct: 195 LYPYEC-------------ETRALSSPGELQ 212
>gi|119578842|gb|EAW58438.1| AT rich interactive domain 3C (BRIGHT- like) [Homo sapiens]
Length = 367
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 137 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 196
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQ 91
L YE T A+S+PG Q
Sbjct: 197 LYPYEC-------------ETRALSSPGELQ 214
>gi|348569889|ref|XP_003470730.1| PREDICTED: AT-rich interactive domain-containing protein 3C-like
[Cavia porcellus]
Length = 415
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 136 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 195
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQ 91
L YE T A+S+PG Q
Sbjct: 196 LYPYEC-------------ETRALSSPGELQ 213
>gi|441622447|ref|XP_004088841.1| PREDICTED: LOW QUALITY PROTEIN: AT-rich interactive
domain-containing protein 3C [Nomascus leucogenys]
Length = 412
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 13/95 (13%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 137 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 196
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPD 95
L YE T A+S+PG Q + D
Sbjct: 197 LYPYEC-------------ETRALSSPGELQAAID 218
>gi|297717338|ref|XP_002834904.1| PREDICTED: AT-rich interactive domain-containing protein 3C [Pongo
abelii]
Length = 313
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 38 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 97
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQ 91
L YE T A+S+PG Q
Sbjct: 98 LYPYEC-------------ETRALSSPGELQ 115
>gi|426361641|ref|XP_004048010.1| PREDICTED: AT-rich interactive domain-containing protein 3C
[Gorilla gorilla gorilla]
Length = 412
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 137 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 196
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQ 91
L YE T A+S+PG Q
Sbjct: 197 LYPYEC-------------ETRALSSPGELQ 214
>gi|431902845|gb|ELK09060.1| AT-rich interactive domain-containing protein 3C [Pteropus alecto]
Length = 437
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 135 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 194
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQ 91
L YE T A+S+PG Q
Sbjct: 195 LYPYEC-------------ETRALSSPGELQ 212
>gi|395513359|ref|XP_003760894.1| PREDICTED: AT-rich interactive domain-containing protein 3A
[Sarcophilus harrisii]
Length = 588
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 192 IPIMAKQVLDLYMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 251
Query: 61 LRDYE 65
L YE
Sbjct: 252 LYPYE 256
>gi|296190177|ref|XP_002743082.1| PREDICTED: AT-rich interactive domain-containing protein 3C
[Callithrix jacchus]
Length = 411
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 136 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 195
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQ 91
L YE T A+S+PG Q
Sbjct: 196 LYPYEC-------------ETRALSSPGELQ 213
>gi|344271684|ref|XP_003407667.1| PREDICTED: AT-rich interactive domain-containing protein 3C-like
[Loxodonta africana]
Length = 411
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 136 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 195
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQ 91
L YE T A+S+PG Q
Sbjct: 196 LYPYEC-------------ETRALSSPGELQ 213
>gi|281346543|gb|EFB22127.1| hypothetical protein PANDA_020032 [Ailuropoda melanoleuca]
Length = 378
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 13/95 (13%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 136 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 195
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPD 95
L YE T A+S+PG Q + D
Sbjct: 196 LYPYEC-------------ETRALSSPGELQAAID 217
>gi|114624471|ref|XP_528495.2| PREDICTED: AT-rich interactive domain-containing protein 3C [Pan
troglodytes]
Length = 313
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 38 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 97
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQ 91
L YE T A+S+PG Q
Sbjct: 98 LYPYEC-------------ETRALSSPGELQ 115
>gi|291219900|ref|NP_001167452.1| AT-rich interactive domain-containing protein 3C [Rattus
norvegicus]
Length = 410
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 135 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 194
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQ 91
L YE T A+S+PG Q
Sbjct: 195 LYPYEC-------------ETRALSSPGELQ 212
>gi|426222213|ref|XP_004005294.1| PREDICTED: AT-rich interactive domain-containing protein 3C [Ovis
aries]
Length = 375
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 13/95 (13%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 142 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 201
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPD 95
L YE T A+S+PG Q + D
Sbjct: 202 LYPYEC-------------ETRALSSPGELQAAID 223
>gi|62865645|ref|NP_001017362.1| AT-rich interactive domain-containing protein 3C isoform 1 [Mus
musculus]
gi|189046199|sp|A6PWV5.2|ARI3C_MOUSE RecName: Full=AT-rich interactive domain-containing protein 3C;
Short=ARID domain-containing protein 3C
gi|187954461|gb|AAI41238.1| AT rich interactive domain 3C (BRIGHT-like) [Mus musculus]
Length = 409
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 134 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 193
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQ 91
L YE T A+S+PG Q
Sbjct: 194 LYPYEC-------------ETRALSSPGELQ 211
>gi|355567679|gb|EHH24020.1| AT-rich interactive domain-containing protein 3C [Macaca mulatta]
Length = 411
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 136 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 195
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQ 91
L YE T A+S+PG Q
Sbjct: 196 LYPYEC-------------ETRALSSPGELQ 213
>gi|62865637|ref|NP_001017363.1| AT-rich interactive domain-containing protein 3C [Homo sapiens]
gi|189045972|sp|A6NKF2.1|ARI3C_HUMAN RecName: Full=AT-rich interactive domain-containing protein 3C;
Short=ARID domain-containing protein 3C
gi|151556456|gb|AAI48444.1| AT rich interactive domain 3C (BRIGHT-like) [synthetic construct]
gi|208965836|dbj|BAG72932.1| AT rich interactive domain 3C [synthetic construct]
Length = 412
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 137 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 196
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQ 91
L YE T A+S+PG Q
Sbjct: 197 LYPYEC-------------ETRALSSPGELQ 214
>gi|357933630|ref|NP_001239551.1| AT-rich interactive domain-containing protein 3C isoform 2 [Mus
musculus]
gi|219520277|gb|AAI45564.1| Arid3c protein [Mus musculus]
Length = 379
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 134 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 193
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQ 91
L YE T A+S+PG Q
Sbjct: 194 LYPYEC-------------ETRALSSPGELQ 211
>gi|73971763|ref|XP_854656.1| PREDICTED: AT-rich interactive domain-containing protein 3C [Canis
lupus familiaris]
Length = 411
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 13/95 (13%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 136 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 195
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPD 95
L YE T A+S+PG Q + D
Sbjct: 196 LYPYEC-------------ETRALSSPGELQAAID 217
>gi|397519418|ref|XP_003829857.1| PREDICTED: AT-rich interactive domain-containing protein 3C [Pan
paniscus]
Length = 412
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 137 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 196
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQ 91
L YE T A+S+PG Q
Sbjct: 197 LYPYEC-------------ETRALSSPGELQ 214
>gi|410978495|ref|XP_003995625.1| PREDICTED: AT-rich interactive domain-containing protein 3C [Felis
catus]
Length = 409
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 13/95 (13%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 136 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 195
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPD 95
L YE T A+S+PG Q + D
Sbjct: 196 LYPYEC-------------ETRALSSPGELQAAID 217
>gi|395855858|ref|XP_003800365.1| PREDICTED: AT-rich interactive domain-containing protein 3C
[Otolemur garnettii]
Length = 408
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 133 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 192
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQ 91
L YE T A+S+PG Q
Sbjct: 193 LYPYEC-------------ETRALSSPGELQ 210
>gi|313245340|emb|CBY40098.1| unnamed protein product [Oikopleura dioica]
Length = 354
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+RL+ V RGG+ ++I ++ W+E+T N PS+ T+A+F LR Y
Sbjct: 229 IPIMAKQVLDLYRLYKLVVERGGLVEVINKKIWREITKGLNLPSSITSAAFTLRTQYMKY 288
Query: 61 LRDYE 65
L YE
Sbjct: 289 LYPYE 293
>gi|403306732|ref|XP_003943876.1| PREDICTED: AT-rich interactive domain-containing protein 3C
[Saimiri boliviensis boliviensis]
Length = 411
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 136 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 195
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQ 91
L YE T A+S+PG Q
Sbjct: 196 LYPYEC-------------ETRALSSPGELQ 213
>gi|109111164|ref|XP_001096190.1| PREDICTED: AT-rich interactive domain-containing protein 3C [Macaca
mulatta]
gi|402897142|ref|XP_003911633.1| PREDICTED: AT-rich interactive domain-containing protein 3C [Papio
anubis]
Length = 411
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 136 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 195
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQ 91
L YE T A+S+PG Q
Sbjct: 196 LYPYEC-------------ETRALSSPGELQ 213
>gi|355753250|gb|EHH57296.1| AT-rich interactive domain-containing protein 3C [Macaca
fascicularis]
Length = 411
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 136 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 195
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQ 91
L YE T A+S+PG Q
Sbjct: 196 LYPYEC-------------ETRALSSPGELQ 213
>gi|391330482|ref|XP_003739689.1| PREDICTED: AT-rich interactive domain-containing protein 3A-like
[Metaseiulus occidentalis]
Length = 466
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ V ARGG+ ++I ++ W+E+T N PS+ T+A+F LR Y
Sbjct: 219 IPIMAKQVLDLYELYRLVVARGGLVEVINKKIWREITKGLNLPSSITSAAFTLRTQYMKY 278
Query: 61 LRDYE 65
L YE
Sbjct: 279 LYPYE 283
>gi|163915555|gb|AAI57423.1| LOC100137630 protein [Xenopus laevis]
Length = 376
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 236 IPIMAKQVLDLYMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 295
Query: 61 LRDYE 65
L YE
Sbjct: 296 LYPYE 300
>gi|119900697|ref|XP_600416.3| PREDICTED: AT-rich interactive domain-containing protein 3C [Bos
taurus]
gi|297478108|ref|XP_002689857.1| PREDICTED: AT-rich interactive domain-containing protein 3C [Bos
taurus]
gi|296484550|tpg|DAA26665.1| TPA: AT rich interactive domain 3A (BRIGHT- like) protein-like [Bos
taurus]
Length = 415
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 142 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 201
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQ 91
L YE T A+S+PG Q
Sbjct: 202 LYPYEC-------------ETRALSSPGELQ 219
>gi|297702927|ref|XP_002828411.1| PREDICTED: AT-rich interactive domain-containing protein 3A,
partial [Pongo abelii]
Length = 336
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 6 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 65
Query: 61 LRDYE 65
L YE
Sbjct: 66 LYPYE 70
>gi|410949889|ref|XP_003981649.1| PREDICTED: AT-rich interactive domain-containing protein 3A [Felis
catus]
Length = 608
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 281 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 340
Query: 61 LRDYE 65
L YE
Sbjct: 341 LYPYE 345
>gi|296232389|ref|XP_002761567.1| PREDICTED: AT-rich interactive domain-containing protein 3A
[Callithrix jacchus]
Length = 593
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 266 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 325
Query: 61 LRDYE 65
L YE
Sbjct: 326 LYPYE 330
>gi|224591422|ref|NP_001101536.2| AT-rich interactive domain-containing protein 3A [Rattus
norvegicus]
gi|197245996|gb|AAI68846.1| Arid3a protein [Rattus norvegicus]
Length = 594
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 260 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 319
Query: 61 LRDYE 65
L YE
Sbjct: 320 LYPYE 324
>gi|296485396|tpg|DAA27511.1| TPA: AT rich interactive domain 3A (BRIGHT- like) protein-like [Bos
taurus]
Length = 590
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 265 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 324
Query: 61 LRDYE 65
L YE
Sbjct: 325 LYPYE 329
>gi|329664246|ref|NP_001192624.1| AT-rich interactive domain-containing protein 3A [Bos taurus]
Length = 591
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 266 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 325
Query: 61 LRDYE 65
L YE
Sbjct: 326 LYPYE 330
>gi|426230957|ref|XP_004009525.1| PREDICTED: AT-rich interactive domain-containing protein 3A [Ovis
aries]
Length = 581
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 256 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 315
Query: 61 LRDYE 65
L YE
Sbjct: 316 LYPYE 320
>gi|440893271|gb|ELR46109.1| AT-rich interactive domain-containing protein 3A [Bos grunniens
mutus]
Length = 591
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 266 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 325
Query: 61 LRDYE 65
L YE
Sbjct: 326 LYPYE 330
>gi|148699676|gb|EDL31623.1| AT rich interactive domain 3A (Bright like), isoform CRA_b [Mus
musculus]
Length = 667
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 335 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 394
Query: 61 LRDYE 65
L YE
Sbjct: 395 LYPYE 399
>gi|335282242|ref|XP_003354004.1| PREDICTED: AT-rich interactive domain-containing protein 3A [Sus
scrofa]
Length = 596
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 266 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 325
Query: 61 LRDYE 65
L YE
Sbjct: 326 LYPYE 330
>gi|29747922|gb|AAH50925.1| AT rich interactive domain 3A (BRIGHT-like) [Mus musculus]
Length = 599
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 267 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 326
Query: 61 LRDYE 65
L YE
Sbjct: 327 LYPYE 331
>gi|6681227|ref|NP_031906.1| AT-rich interactive domain-containing protein 3A [Mus musculus]
gi|12230032|sp|Q62431.1|ARI3A_MOUSE RecName: Full=AT-rich interactive domain-containing protein 3A;
Short=ARID domain-containing protein 3A; AltName:
Full=B-cell regulator of IgH transcription;
Short=Bright; AltName: Full=Dead ringer-like protein 1
gi|1401348|gb|AAB03416.1| Bright [Mus musculus]
gi|74190048|dbj|BAE24635.1| unnamed protein product [Mus musculus]
gi|74192032|dbj|BAE32951.1| unnamed protein product [Mus musculus]
gi|148699675|gb|EDL31622.1| AT rich interactive domain 3A (Bright like), isoform CRA_a [Mus
musculus]
gi|148699677|gb|EDL31624.1| AT rich interactive domain 3A (Bright like), isoform CRA_a [Mus
musculus]
Length = 601
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 267 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 326
Query: 61 LRDYE 65
L YE
Sbjct: 327 LYPYE 331
>gi|390360646|ref|XP_793955.2| PREDICTED: uncharacterized protein LOC589213 [Strongylocentrotus
purpuratus]
Length = 2255
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 43/69 (62%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P + G++LDL+ L+ +V A GG+ K+ E +W V+ + FP + +V+R++Y
Sbjct: 39 MPKVSGRDLDLYLLYSKVVALGGVVKVTNEHKWDIVSEVLGFPPGCSQIGYVIRQHYIRY 98
Query: 61 LRDYEQIYF 69
L YE+++F
Sbjct: 99 LEAYEKVHF 107
>gi|402903514|ref|XP_003914610.1| PREDICTED: AT-rich interactive domain-containing protein 3A [Papio
anubis]
Length = 589
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 260 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 319
Query: 61 LRDYE 65
L YE
Sbjct: 320 LYPYE 324
>gi|426386497|ref|XP_004059720.1| PREDICTED: AT-rich interactive domain-containing protein 3A
[Gorilla gorilla gorilla]
Length = 965
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 635 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 694
Query: 61 LRDYE 65
L YE
Sbjct: 695 LYPYE 699
>gi|3399674|gb|AAC28918.1| DRIL1 DNA binding protein homolog, partial CDS [Homo sapiens]
Length = 363
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 32 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 91
Query: 61 LRDYE 65
L YE
Sbjct: 92 LYPYE 96
>gi|395831277|ref|XP_003788730.1| PREDICTED: AT-rich interactive domain-containing protein 3A
[Otolemur garnettii]
Length = 614
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 265 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 324
Query: 61 LRDYE 65
L YE
Sbjct: 325 LYPYE 329
>gi|38173800|gb|AAH60828.1| AT rich interactive domain 3A (BRIGHT-like) [Homo sapiens]
gi|167773971|gb|ABZ92420.1| AT rich interactive domain 3A (BRIGHT-like) [synthetic construct]
Length = 593
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 262 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMEY 321
Query: 61 LRDYE 65
L YE
Sbjct: 322 LYPYE 326
>gi|25808791|gb|AAN74028.1| E2F binding protein [Homo sapiens]
Length = 593
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 262 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 321
Query: 61 LRDYE 65
L YE
Sbjct: 322 LYPYE 326
>gi|354480834|ref|XP_003502608.1| PREDICTED: AT-rich interactive domain-containing protein 3A
[Cricetulus griseus]
Length = 601
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 271 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 330
Query: 61 LRDYE 65
L YE
Sbjct: 331 LYPYE 335
>gi|21620048|gb|AAH33163.1| ARID3A protein [Homo sapiens]
Length = 443
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 112 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 171
Query: 61 LRDYE 65
L YE
Sbjct: 172 LYPYE 176
>gi|431922200|gb|ELK19291.1| AT-rich interactive domain-containing protein 3A [Pteropus alecto]
Length = 540
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 210 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 269
Query: 61 LRDYE 65
L YE
Sbjct: 270 LYPYE 274
>gi|4885193|ref|NP_005215.1| AT-rich interactive domain-containing protein 3A [Homo sapiens]
gi|12230034|sp|Q99856.2|ARI3A_HUMAN RecName: Full=AT-rich interactive domain-containing protein 3A;
Short=ARID domain-containing protein 3A; AltName:
Full=B-cell regulator of IgH transcription;
Short=Bright; AltName: Full=Dead ringer-like protein 1;
AltName: Full=E2F-binding protein 1
gi|2529688|gb|AAC32888.1| DNA binding protein homolog [Homo sapiens]
gi|3002816|gb|AAC69994.1| dead ringer like 1 protein [Homo sapiens]
Length = 593
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 262 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 321
Query: 61 LRDYE 65
L YE
Sbjct: 322 LYPYE 326
>gi|410288966|gb|JAA23083.1| AT rich interactive domain 3A (BRIGHT-like) [Pan troglodytes]
Length = 594
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 262 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 321
Query: 61 LRDYE 65
L YE
Sbjct: 322 LYPYE 326
>gi|410218092|gb|JAA06265.1| AT rich interactive domain 3A (BRIGHT-like) [Pan troglodytes]
gi|410342267|gb|JAA40080.1| AT rich interactive domain 3A (BRIGHT-like) [Pan troglodytes]
Length = 594
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 262 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 321
Query: 61 LRDYE 65
L YE
Sbjct: 322 LYPYE 326
>gi|119589986|gb|EAW69580.1| AT rich interactive domain 3A (BRIGHT- like) [Homo sapiens]
Length = 593
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 262 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 321
Query: 61 LRDYE 65
L YE
Sbjct: 322 LYPYE 326
>gi|348550216|ref|XP_003460928.1| PREDICTED: AT-rich interactive domain-containing protein 3A-like
[Cavia porcellus]
Length = 608
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 274 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 333
Query: 61 LRDYE 65
L YE
Sbjct: 334 LYPYE 338
>gi|109122688|ref|XP_001092793.1| PREDICTED: AT-rich interactive domain-containing protein 3A [Macaca
mulatta]
Length = 589
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 260 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 319
Query: 61 LRDYE 65
L YE
Sbjct: 320 LYPYE 324
>gi|363743788|ref|XP_003642918.1| PREDICTED: AT-rich interactive domain-containing protein 3A-like
[Gallus gallus]
Length = 603
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L++ VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 264 IPIMAKQVLDLYMLYMLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 323
Query: 61 LRDYE 65
L YE
Sbjct: 324 LYPYE 328
>gi|326934454|ref|XP_003213305.1| PREDICTED: AT-rich interactive domain-containing protein 3A-like,
partial [Meleagris gallopavo]
Length = 458
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L++ VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 177 IPIMAKQVLDLYMLYMLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 236
Query: 61 LRDYE 65
L YE
Sbjct: 237 LYPYE 241
>gi|355702916|gb|EHH29407.1| AT-rich interactive domain-containing protein 3A, partial [Macaca
mulatta]
Length = 549
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 220 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 279
Query: 61 LRDYE 65
L YE
Sbjct: 280 LYPYE 284
>gi|403308111|ref|XP_003944515.1| PREDICTED: AT-rich interactive domain-containing protein 3A
[Saimiri boliviensis boliviensis]
Length = 489
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 261 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 320
Query: 61 LRDYE 65
L YE
Sbjct: 321 LYPYE 325
>gi|345313768|ref|XP_001514472.2| PREDICTED: hypothetical protein LOC100083920, partial
[Ornithorhynchus anatinus]
Length = 363
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P++ T+A+F LR Y
Sbjct: 191 IPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTKGLSLPTSITSAAFTLRTQYMKY 250
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQ 91
L YE T A+S+PG Q
Sbjct: 251 LYPYEC-------------ETRALSSPGELQ 268
>gi|359322163|ref|XP_855193.3| PREDICTED: AT-rich interactive domain-containing protein 3A [Canis
lupus familiaris]
Length = 605
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 280 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 339
Query: 61 LRDYE 65
L YE
Sbjct: 340 LYPYE 344
>gi|281211469|gb|EFA85631.1| cGMP-stimulated cGMP phosphodiesterase [Polysphondylium pallidum
PN500]
Length = 965
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI KEL+LH+L+ V RGG+E +I+ + W+++T T+A F LR +Y
Sbjct: 68 IPIFDHKELNLHKLYTCVITRGGLEAVIENKLWRQITTDLAVDPERTDAGFRLRIHYLKY 127
Query: 61 LRDYEQIYFFRSQD 74
L YE+ YF + D
Sbjct: 128 LYPYERKYFLKMDD 141
>gi|351714021|gb|EHB16940.1| AT-rich interactive domain-containing protein 3A [Heterocephalus
glaber]
Length = 577
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 249 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 308
Query: 61 LRDYE 65
L YE
Sbjct: 309 LYPYE 313
>gi|397485353|ref|XP_003846170.1| PREDICTED: LOW QUALITY PROTEIN: AT-rich interactive
domain-containing protein 3A [Pan paniscus]
Length = 520
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 287 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 346
Query: 61 LRDYE 65
L YE
Sbjct: 347 LYPYE 351
>gi|344243375|gb|EGV99478.1| AT-rich interactive domain-containing protein 3A [Cricetulus
griseus]
Length = 974
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 271 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 330
Query: 61 LRDYE 65
L YE
Sbjct: 331 LYPYE 335
>gi|114674385|ref|XP_524501.2| PREDICTED: AT-rich interactive domain-containing protein 3A [Pan
troglodytes]
Length = 722
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 390 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 449
Query: 61 LRDYE 65
L YE
Sbjct: 450 LYPYE 454
>gi|432101139|gb|ELK29423.1| AT-rich interactive domain-containing protein 3A [Myotis davidii]
Length = 804
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 477 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 536
Query: 61 LRDYE 65
L YE
Sbjct: 537 LYPYE 541
>gi|56799575|gb|AAW30734.1| DRIL3 [Homo sapiens]
Length = 589
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 262 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 321
Query: 61 LRDYE 65
L YE
Sbjct: 322 LYPYE 326
>gi|47551229|ref|NP_999799.1| protein dead ringer homolog [Strongylocentrotus purpuratus]
gi|74816519|sp|Q8MQH7.1|DRI_STRPU RecName: Full=Protein dead ringer homolog; AltName:
Full=Deadringer-like protein; AltName:
Full=Spdeadringer; Short=Spdri
gi|21999527|gb|AAM81746.1| deadringer-like protein [Strongylocentrotus purpuratus]
Length = 490
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ V A+GG+ ++I +++W+E+T N P++ T+A+F LR Y
Sbjct: 226 IPIMAKQVLDLYELYNLVVAKGGLVEVINKKQWREITKGLNLPASITSAAFTLRTQYMKY 285
Query: 61 LRDYE 65
L YE
Sbjct: 286 LYPYE 290
>gi|355669395|gb|AER94513.1| AT-rich interactive domain-containing protein 3A [Mustela
putorius furo]
Length = 195
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 32 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 91
Query: 61 LRDYE 65
L YE
Sbjct: 92 LYPYE 96
>gi|322366555|gb|ADW95351.1| deadringer [Paracentrotus lividus]
Length = 589
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ V A+GG+ ++I +++W+E+T N P++ T+A+F LR Y
Sbjct: 320 IPIMAKQVLDLYELYNLVVAKGGLVEVINKKQWREITKGLNLPASITSAAFTLRTQYMKY 379
Query: 61 LRDYE 65
L YE
Sbjct: 380 LYPYE 384
>gi|444522179|gb|ELV13325.1| AT-rich interactive domain-containing protein 3B [Tupaia chinensis]
Length = 517
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 231 IPIMAKQTLDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 290
Query: 61 LRDYE 65
L YE
Sbjct: 291 LYAYE 295
>gi|326671572|ref|XP_691265.5| PREDICTED: AT-rich interactive domain-containing protein 3A-like
[Danio rerio]
Length = 524
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 226 IPIMAKQVLDLYMLYQLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 285
Query: 61 LRDYE 65
L YE
Sbjct: 286 LYTYE 290
>gi|328350132|emb|CCA36532.1| Hepatocyte growth factor-regulated tyrosine kinase substrate
[Komagataella pastoris CBS 7435]
Length = 725
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Query: 155 QYPIHQVPSSYNVINNNNATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQ 214
+YP++ P+S N NN NA RR K+ K++DP PK + S Y FF EQ
Sbjct: 613 EYPVY--PNS-NDYNNTNAKGTMA------ERRTKTGRKKKDPNAPKRSLSAYMFFANEQ 663
Query: 215 HARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDY 266
++ +PG + EI +++GE W L KA Y+ KA +DK+RY +E +Y
Sbjct: 664 RDIVRSENPGIQFGEIGKLLGEKWKALDAEGKAPYESKAEEDKKRYELEKAEY 716
>gi|432863094|ref|XP_004069987.1| PREDICTED: uncharacterized protein LOC101158521 [Oryzias latipes]
Length = 934
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL++LF VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 269 IPIMAKQVLDLYKLFKLVTEKGGLVEVINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 328
Query: 61 LRDYE 65
L +E
Sbjct: 329 LYPFE 333
>gi|410908493|ref|XP_003967725.1| PREDICTED: AT-rich interactive domain-containing protein 3A-like
[Takifugu rubripes]
Length = 535
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 43/65 (66%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL++L+ VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 235 IPIMAKQVLDLYKLYALVTEKGGLVEVINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 294
Query: 61 LRDYE 65
L +E
Sbjct: 295 LYPFE 299
>gi|344284223|ref|XP_003413868.1| PREDICTED: AT-rich interactive domain-containing protein 3B
[Loxodonta africana]
Length = 557
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+EVT N P++ T+A+F LR Y
Sbjct: 238 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREVTKGLNLPTSITSAAFTLRTQYMKY 297
Query: 61 LRDYE 65
L YE
Sbjct: 298 LYAYE 302
>gi|253741679|gb|EES98544.1| ARID1 AT-rich interaction domain protein [Giardia intestinalis ATCC
50581]
Length = 467
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLL 61
PI+G K+LD+++LF V ARGG + +I+ WKE+ P++ TN + LR Y+S +
Sbjct: 36 PIVGHKQLDMYQLFRAVQARGGAKNVIQ---WKEIGKKLGLPASVTNVGYTLRTKYESYI 92
Query: 62 RDYEQIYFFR-SQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAV 109
YE+I Q + PS N+ T+ +P PR+N A+
Sbjct: 93 LPYEEILCNEFPQMEFADPSLNSTLRGVTSASAP----ISLTPRVNRAL 137
>gi|358331808|dbj|GAA50564.1| AT-rich interactive domain-containing protein 1 [Clonorchis sinensis]
Length = 2499
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P + + LDL+R ++ V RGG+ ++IK RRWKE++ + N ++A+ A++ LRK Y
Sbjct: 996 LPQVVKQPLDLYRFYLAVRERGGVLEVIKARRWKEISQLVNINASAS-AAYTLRKNYCKF 1054
Query: 61 LRDYE 65
L DYE
Sbjct: 1055 LLDYE 1059
>gi|194238075|ref|XP_001917893.1| PREDICTED: AT-rich interactive domain-containing protein 3A-like,
partial [Equus caballus]
Length = 548
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 53 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 112
Query: 61 LRDYE 65
L YE
Sbjct: 113 LYPYE 117
>gi|255080944|ref|XP_002504038.1| ARID/BRIGHT DNA binding domain protein [Micromonas sp. RCC299]
gi|226519305|gb|ACO65296.1| ARID/BRIGHT DNA binding domain protein [Micromonas sp. RCC299]
Length = 1638
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 7/88 (7%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFP----STATNASFVLRKYY 57
P G ELDL+++ VEV RGG E + E+RWK + A P +T T+ASF LR Y
Sbjct: 1464 PTFAGAELDLYKVLVEVMCRGGYELVTNEKRWKTI-AKLACPGKDLTTQTSASFALRTNY 1522
Query: 58 QSLLRDYEQIYFFRSQDSWQGPSTNAVS 85
Q L D E+ + + + D+ GP +A +
Sbjct: 1523 QRFLLDVER-WLWENADT-LGPRPDAFT 1548
>gi|432855007|ref|XP_004068026.1| PREDICTED: AT-rich interactive domain-containing protein 3A-like
[Oryzias latipes]
Length = 552
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 235 IPIMAKQVLDLYMLYKLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 294
Query: 61 LRDYE 65
L YE
Sbjct: 295 LYPYE 299
>gi|348539220|ref|XP_003457087.1| PREDICTED: AT-rich interactive domain-containing protein 3A-like
[Oreochromis niloticus]
Length = 546
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 242 IPIMAKQVLDLYMLYKLVTEKGGLVEVINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 301
Query: 61 LRDYE 65
L YE
Sbjct: 302 LYPYE 306
>gi|354480484|ref|XP_003502436.1| PREDICTED: AT-rich interactive domain-containing protein 3B
[Cricetulus griseus]
Length = 560
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 232 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 291
Query: 61 LRDYE 65
L YE
Sbjct: 292 LYAYE 296
>gi|326926413|ref|XP_003209395.1| PREDICTED: LOW QUALITY PROTEIN: AT-rich interactive
domain-containing protein 3B-like [Meleagris gallopavo]
Length = 524
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 248 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 307
Query: 61 LRDYE 65
L YE
Sbjct: 308 LYAYE 312
>gi|351708959|gb|EHB11878.1| AT-rich interactive domain-containing protein 3B [Heterocephalus
glaber]
Length = 559
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 233 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 292
Query: 61 LRDYE 65
L YE
Sbjct: 293 LYAYE 297
>gi|371877751|ref|NP_001243086.1| AT-rich interactive domain-containing protein 3B [Gallus gallus]
Length = 561
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 249 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 308
Query: 61 LRDYE 65
L YE
Sbjct: 309 LYAYE 313
>gi|317487569|gb|ADV31340.1| ARID3B [Gallus gallus]
Length = 560
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 249 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 308
Query: 61 LRDYE 65
L YE
Sbjct: 309 LYAYE 313
>gi|302828472|ref|XP_002945803.1| hypothetical protein VOLCADRAFT_72419 [Volvox carteri f.
nagariensis]
gi|300268618|gb|EFJ52798.1| hypothetical protein VOLCADRAFT_72419 [Volvox carteri f.
nagariensis]
Length = 199
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 195 RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKAL 253
+DP PK N + + +F Q ++K +PG E+ +++GE W L +EK+ Y+EKA
Sbjct: 76 KDPNAPKKNLTAFMYFSNAQRDKVKTDNPGVSFGEVGKLLGEKWKSLGANEKSEYEEKAK 135
Query: 254 KDKERYRIEMEDYRE 268
KDKERY EME Y+E
Sbjct: 136 KDKERYAKEMEAYKE 150
>gi|187956533|gb|AAI50756.1| AT rich interactive domain 3B (BRIGHT-like) [Mus musculus]
Length = 568
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 237 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 296
Query: 61 LRDYE 65
L YE
Sbjct: 297 LYAYE 301
>gi|126272478|ref|XP_001379446.1| PREDICTED: AT-rich interactive domain-containing protein 3B
[Monodelphis domestica]
Length = 565
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 232 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 291
Query: 61 LRDYE 65
L YE
Sbjct: 292 LYAYE 296
>gi|131887346|ref|NP_001076471.1| AT-rich interactive domain-containing protein 3B [Danio rerio]
gi|124297222|gb|AAI31868.1| Arid3b protein [Danio rerio]
Length = 537
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 215 IPIMAKQVLDLYMLYKLVTEKGGLVEVINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 274
Query: 61 LRDYE 65
L YE
Sbjct: 275 LYPYE 279
>gi|426248308|ref|XP_004017905.1| PREDICTED: AT-rich interactive domain-containing protein 3B [Ovis
aries]
Length = 551
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 238 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 297
Query: 61 LRDYE 65
L YE
Sbjct: 298 LYAYE 302
>gi|348523219|ref|XP_003449121.1| PREDICTED: AT-rich interactive domain-containing protein 3A-like
[Oreochromis niloticus]
Length = 556
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 240 IPIMAKQVLDLYMLYKLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 299
Query: 61 LRDYE 65
L YE
Sbjct: 300 LYPYE 304
>gi|9790033|ref|NP_062663.1| AT-rich interactive domain-containing protein 3B [Mus musculus]
gi|81870092|sp|Q9Z1N7.1|ARI3B_MOUSE RecName: Full=AT-rich interactive domain-containing protein 3B;
Short=ARID domain-containing protein 3B; AltName:
Full=Bright and dead ringer protein; AltName:
Full=Bright-like protein
gi|4185571|gb|AAD09134.1| bright and dead ringer gene product homologous protein Bdp [Mus
musculus]
gi|148693977|gb|EDL25924.1| AT rich interactive domain 3B (Bright like) [Mus musculus]
Length = 568
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 237 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 296
Query: 61 LRDYE 65
L YE
Sbjct: 297 LYAYE 301
>gi|403307461|ref|XP_003944212.1| PREDICTED: AT-rich interactive domain-containing protein 3B
[Saimiri boliviensis boliviensis]
Length = 559
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 240 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 299
Query: 61 LRDYE 65
L YE
Sbjct: 300 LYAYE 304
>gi|402874873|ref|XP_003901249.1| PREDICTED: AT-rich interactive domain-containing protein 3B [Papio
anubis]
Length = 570
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 247 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 306
Query: 61 LRDYE 65
L YE
Sbjct: 307 LYAYE 311
>gi|327288206|ref|XP_003228819.1| PREDICTED: AT-rich interactive domain-containing protein 3B-like
[Anolis carolinensis]
Length = 557
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 240 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 299
Query: 61 LRDYE 65
L YE
Sbjct: 300 LYAYE 304
>gi|5453638|ref|NP_006456.1| AT-rich interactive domain-containing protein 3B [Homo sapiens]
gi|4185569|gb|AAD09133.1| bright and dead ringer gene product homologous protein Bdp [Homo
sapiens]
gi|119619733|gb|EAW99327.1| AT rich interactive domain 3B (BRIGHT- like), isoform CRA_a [Homo
sapiens]
Length = 560
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 239 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 298
Query: 61 LRDYE 65
L YE
Sbjct: 299 LYAYE 303
>gi|395746964|ref|XP_003778540.1| PREDICTED: LOW QUALITY PROTEIN: AT-rich interactive
domain-containing protein 3B [Pongo abelii]
Length = 567
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 245 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 304
Query: 61 LRDYE 65
L YE
Sbjct: 305 LYAYE 309
>gi|152013359|sp|Q8IVW6.2|ARI3B_HUMAN RecName: Full=AT-rich interactive domain-containing protein 3B;
Short=ARID domain-containing protein 3B; AltName:
Full=Bright and dead ringer protein; AltName:
Full=Bright-like protein
gi|119619734|gb|EAW99328.1| AT rich interactive domain 3B (BRIGHT- like), isoform CRA_b [Homo
sapiens]
Length = 561
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 239 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 298
Query: 61 LRDYE 65
L YE
Sbjct: 299 LYAYE 303
>gi|27469393|gb|AAH41792.1| AT rich interactive domain 3B (BRIGHT-like) [Homo sapiens]
Length = 562
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 240 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 299
Query: 61 LRDYE 65
L YE
Sbjct: 300 LYAYE 304
>gi|397479711|ref|XP_003811151.1| PREDICTED: AT-rich interactive domain-containing protein 3B [Pan
paniscus]
Length = 568
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 248 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 307
Query: 61 LRDYE 65
L YE
Sbjct: 308 LYAYE 312
>gi|169403961|ref|NP_001093509.1| AT-rich interactive domain-containing protein 3A [Danio rerio]
gi|152013358|sp|A2BEA6.1|ARI3A_DANRE RecName: Full=AT-rich interactive domain-containing protein 3A;
Short=ARID domain-containing protein 3A; AltName:
Full=Bright homolog
Length = 570
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 256 IPIMAKQVLDLYTLYKLVTEKGGLVEVINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 315
Query: 61 LRDYE 65
L YE
Sbjct: 316 LYPYE 320
>gi|410921784|ref|XP_003974363.1| PREDICTED: AT-rich interactive domain-containing protein 3A-like
[Takifugu rubripes]
Length = 552
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 239 IPIMAKQVLDLYSLYRLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 298
Query: 61 LRDYE 65
L YE
Sbjct: 299 LYPYE 303
>gi|440897313|gb|ELR49037.1| AT-rich interactive domain-containing protein 3B [Bos grunniens
mutus]
Length = 554
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 237 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 296
Query: 61 LRDYE 65
L YE
Sbjct: 297 LYAYE 301
>gi|410960848|ref|XP_003986999.1| PREDICTED: AT-rich interactive domain-containing protein 3B [Felis
catus]
Length = 557
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 239 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 298
Query: 61 LRDYE 65
L YE
Sbjct: 299 LYAYE 303
>gi|355778179|gb|EHH63215.1| AT-rich interactive domain-containing protein 3B [Macaca
fascicularis]
Length = 563
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 240 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 299
Query: 61 LRDYE 65
L YE
Sbjct: 300 LYAYE 304
>gi|296213685|ref|XP_002753373.1| PREDICTED: AT-rich interactive domain-containing protein 3B isoform
1 [Callithrix jacchus]
Length = 561
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 239 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 298
Query: 61 LRDYE 65
L YE
Sbjct: 299 LYAYE 303
>gi|157823629|ref|NP_001102471.1| AT-rich interactive domain-containing protein 3B [Rattus
norvegicus]
gi|149041815|gb|EDL95656.1| AT rich interactive domain 3B (Bright like) (predicted) [Rattus
norvegicus]
Length = 565
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 231 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 290
Query: 61 LRDYE 65
L YE
Sbjct: 291 LYAYE 295
>gi|426379769|ref|XP_004056562.1| PREDICTED: AT-rich interactive domain-containing protein 3B
[Gorilla gorilla gorilla]
Length = 563
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 242 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 301
Query: 61 LRDYE 65
L YE
Sbjct: 302 LYAYE 306
>gi|297296882|ref|XP_001099559.2| PREDICTED: AT-rich interactive domain-containing protein 3B isoform
2 [Macaca mulatta]
Length = 712
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 389 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 448
Query: 61 LRDYE 65
L YE
Sbjct: 449 LYAYE 453
>gi|332235739|ref|XP_003267060.1| PREDICTED: LOW QUALITY PROTEIN: AT-rich interactive
domain-containing protein 3B [Nomascus leucogenys]
Length = 573
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 251 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 310
Query: 61 LRDYE 65
L YE
Sbjct: 311 LYAYE 315
>gi|149691780|ref|XP_001492933.1| PREDICTED: AT-rich interactive domain-containing protein 3B [Equus
caballus]
Length = 565
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 245 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 304
Query: 61 LRDYE 65
L YE
Sbjct: 305 LYAYE 309
>gi|395822510|ref|XP_003784560.1| PREDICTED: AT-rich interactive domain-containing protein 3B
[Otolemur garnettii]
Length = 556
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 234 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 293
Query: 61 LRDYE 65
L YE
Sbjct: 294 LYAYE 298
>gi|194378530|dbj|BAG63430.1| unnamed protein product [Homo sapiens]
Length = 444
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 239 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 298
Query: 61 LRDYE 65
L YE
Sbjct: 299 LYAYE 303
>gi|300796058|ref|NP_001179977.1| AT-rich interactive domain-containing protein 3B [Bos taurus]
gi|296475441|tpg|DAA17556.1| TPA: AT rich interactive domain 3B (BRIGHT-like) [Bos taurus]
Length = 553
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 237 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 296
Query: 61 LRDYE 65
L YE
Sbjct: 297 LYAYE 301
>gi|301775216|ref|XP_002923025.1| PREDICTED: AT-rich interactive domain-containing protein 3B-like
[Ailuropoda melanoleuca]
Length = 558
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 240 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 299
Query: 61 LRDYE 65
L YE
Sbjct: 300 LYAYE 304
>gi|281344661|gb|EFB20245.1| hypothetical protein PANDA_012097 [Ailuropoda melanoleuca]
Length = 559
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 240 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 299
Query: 61 LRDYE 65
L YE
Sbjct: 300 LYAYE 304
>gi|74000735|ref|XP_544771.2| PREDICTED: AT-rich interactive domain-containing protein 3B isoform
2 [Canis lupus familiaris]
Length = 560
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 240 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 299
Query: 61 LRDYE 65
L YE
Sbjct: 300 LYAYE 304
>gi|348555639|ref|XP_003463631.1| PREDICTED: LOW QUALITY PROTEIN: AT-rich interactive
domain-containing protein 3B-like [Cavia porcellus]
Length = 555
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 232 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 291
Query: 61 LRDYE 65
L YE
Sbjct: 292 LYAYE 296
>gi|47224488|emb|CAG08738.1| unnamed protein product [Tetraodon nigroviridis]
Length = 762
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 43/65 (66%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL++L+ VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 57 IPIMAKQVLDLYKLYTLVTEKGGLVEVINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 116
Query: 61 LRDYE 65
L +E
Sbjct: 117 LYPFE 121
>gi|194384932|dbj|BAG60872.1| unnamed protein product [Homo sapiens]
Length = 470
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 239 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 298
Query: 61 LRDYE 65
L YE
Sbjct: 299 LYAYE 303
>gi|431893672|gb|ELK03493.1| AT-rich interactive domain-containing protein 3B [Pteropus alecto]
Length = 487
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 214 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 273
Query: 61 LRDYE 65
L YE
Sbjct: 274 LYAYE 278
>gi|348500344|ref|XP_003437733.1| PREDICTED: AT-rich interactive domain-containing protein 3B-like
[Oreochromis niloticus]
Length = 594
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 265 IPIMAKQVLDLYMLYKLVTEKGGLVEVINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 324
Query: 61 LRDYE 65
L YE
Sbjct: 325 LYPYE 329
>gi|432117420|gb|ELK37762.1| AT-rich interactive domain-containing protein 3B [Myotis davidii]
Length = 550
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 233 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 292
Query: 61 LRDYE 65
L YE
Sbjct: 293 LYAYE 297
>gi|149045688|gb|EDL98688.1| RGD1560943 (predicted) [Rattus norvegicus]
Length = 103
Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 13/95 (13%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR Y
Sbjct: 11 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKY 70
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPD 95
L YE T A+S+PG Q + D
Sbjct: 71 LYPYE-------------CETRALSSPGELQAAID 92
>gi|62087240|dbj|BAD92067.1| AT rich interactive domain 3B (BRIGHT- like) protein variant [Homo
sapiens]
Length = 476
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 280 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 339
Query: 61 LRDYE 65
L YE
Sbjct: 340 LYAYE 344
>gi|410912036|ref|XP_003969496.1| PREDICTED: AT-rich interactive domain-containing protein 3B-like
[Takifugu rubripes]
Length = 603
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 297 IPIMAKQVLDLYMLYKLVTEKGGLVEVINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 356
Query: 61 LRDYE 65
L YE
Sbjct: 357 LYPYE 361
>gi|114658087|ref|XP_529731.2| PREDICTED: AT-rich interactive domain-containing protein 3B [Pan
troglodytes]
Length = 667
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 347 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 406
Query: 61 LRDYE 65
L YE
Sbjct: 407 LYAYE 411
>gi|449281490|gb|EMC88547.1| AT-rich interactive domain-containing protein 3B, partial [Columba
livia]
Length = 415
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 101 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 160
Query: 61 LRDYE 65
L YE
Sbjct: 161 LYAYE 165
>gi|291415062|ref|XP_002723776.1| PREDICTED: AT rich interactive domain 3B [Oryctolagus cuniculus]
Length = 693
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II + W+E+T N P++ T+A+F LR Y
Sbjct: 381 IPIMAKQTLDLYMLYKLVTEKGGLVEIINRKIWREITKGLNLPTSITSAAFTLRTQYMKY 440
Query: 61 LRDYE 65
L YE
Sbjct: 441 LYAYE 445
>gi|432853159|ref|XP_004067569.1| PREDICTED: AT-rich interactive domain-containing protein 3B-like
[Oryzias latipes]
Length = 736
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 405 IPIMAKQVLDLYMLYKLVTEKGGLVEVINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 464
Query: 61 LRDYE 65
L YE
Sbjct: 465 LYPYE 469
>gi|47211166|emb|CAF95993.1| unnamed protein product [Tetraodon nigroviridis]
Length = 297
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 32 IPIMAKQVLDLYSLYRLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 91
Query: 61 LRDYE 65
L YE
Sbjct: 92 LYPYE 96
>gi|254220832|pdb|2KK0|A Chain A, Solution Structure Of Dead Ringer-Like Protein 1 (At-Rich
Interactive Domain-Containing Protein 3a) From Homo
Sapiens, Northeast Structural Genomics Consortium (Nesg)
Target Hr4394c
Length = 145
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 56 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 115
Query: 61 LRDYE 65
L YE
Sbjct: 116 LYPYE 120
>gi|427796997|gb|JAA63950.1| Putative dna-binding bright/brcaa1/rbp1, partial [Rhipicephalus
pulchellus]
Length = 349
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+ V +RGG+ ++I ++ W+E+T N PS+ T+A+F LR Y
Sbjct: 95 IPIMAKQVLDLFELYRLVVSRGGLVEVINKKIWREITKGLNLPSSITSAAFTLRTQYMKY 154
Query: 61 LRDYE 65
L YE
Sbjct: 155 LYPYE 159
>gi|449514207|ref|XP_002189821.2| PREDICTED: AT-rich interactive domain-containing protein 3A-like
[Taeniopygia guttata]
Length = 408
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 91 IPIMAKQVLDLYTLYQLVTDKGGLVEVINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 150
Query: 61 LRDYE 65
L YE
Sbjct: 151 LYPYE 155
>gi|427793739|gb|JAA62321.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 374
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+ V +RGG+ ++I ++ W+E+T N PS+ T+A+F LR Y
Sbjct: 120 IPIMAKQVLDLFELYRLVVSRGGLVEVINKKIWREITKGLNLPSSITSAAFTLRTQYMKY 179
Query: 61 LRDYE 65
L YE
Sbjct: 180 LYPYE 184
>gi|350586841|ref|XP_003128540.3| PREDICTED: AT-rich interactive domain-containing protein 3B [Sus
scrofa]
Length = 382
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 57 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 116
Query: 61 LRDYE 65
L YE
Sbjct: 117 LYAYE 121
>gi|405952221|gb|EKC20059.1| Trithorax group protein osa [Crassostrea gigas]
Length = 2566
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P I + LDL+RL++ V RGG+ ++ K ++WKE+ + N S+A+ A+F L+K Y
Sbjct: 916 MPSISKQPLDLYRLYLHVQERGGMLEVTKAKKWKEICGLINIGSSAS-AAFTLKKNYIKY 974
Query: 61 LRDYE 65
L YE
Sbjct: 975 LFHYE 979
>gi|301619053|ref|XP_002938927.1| PREDICTED: AT-rich interactive domain-containing protein 3B-like
[Xenopus (Silurana) tropicalis]
Length = 549
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 250 IPIMAKQLLDLYMLYKLVTEKGGLVEVINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 309
Query: 61 LRDYE 65
L YE
Sbjct: 310 LYLYE 314
>gi|444509526|gb|ELV09321.1| AT-rich interactive domain-containing protein 3A [Tupaia chinensis]
Length = 406
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 11/119 (9%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+V VT +GG+ ++I ++ W+EVT + P++ T+A+F LR ++
Sbjct: 202 IPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREVTKGLHLPTSITSAAFTLRTQLRA- 260
Query: 61 LRDYEQIYFFRSQDS-------WQGPSTNA--VSAPGTAQPSPDIQSAVQQPRINAAVL 110
+ D E + + Q +GP TNA V AP + S D + ++ P N +L
Sbjct: 261 VSDDETVRLWDVQSKQCTRTVPLKGPVTNAAIVLAP-VSMLSSDFRPSLPLPHFNKHLL 318
>gi|395501275|ref|XP_003755022.1| PREDICTED: AT-rich interactive domain-containing protein 3B
[Sarcophilus harrisii]
Length = 550
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 236 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 295
Query: 61 LRDYE 65
L YE
Sbjct: 296 LYAYE 300
>gi|443726118|gb|ELU13411.1| hypothetical protein CAPTEDRAFT_64285, partial [Capitella teleta]
Length = 144
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ LF V ++GG+ ++I ++ W+E+T N PS+ T+A+F LR Y
Sbjct: 51 IPIMAKQTLDLYELFRLVVSKGGLVEVINKKLWREITKGLNLPSSITSAAFTLRTQYMKY 110
Query: 61 LRDYE 65
L YE
Sbjct: 111 LYPYE 115
>gi|432876358|ref|XP_004073009.1| PREDICTED: AT-rich interactive domain-containing protein 3A-like
[Oryzias latipes]
Length = 366
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 58 IPIMAKQVLDLYMLYKLVTEKGGLVEVINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 117
Query: 61 LRDYE 65
L YE
Sbjct: 118 LYPYE 122
>gi|340381544|ref|XP_003389281.1| PREDICTED: hypothetical protein LOC100641902 [Amphimedon
queenslandica]
Length = 502
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LD+++LF V RGG+ ++IK++ W+++ N P++ T+A+F +R Y
Sbjct: 134 IPIMAKQPLDMYKLFKLVVERGGLVEVIKKKAWRDIAKELNLPASITSAAFTMRSQYVKY 193
Query: 61 LRDYE 65
L YE
Sbjct: 194 LYPYE 198
>gi|449273013|gb|EMC82642.1| AT-rich interactive domain-containing protein 3A, partial [Columba
livia]
Length = 239
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL L+ VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 48 IPIMAKQVLDLFMLYTLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKY 107
Query: 61 LRDYE 65
L YE
Sbjct: 108 LYPYE 112
>gi|224061777|ref|XP_002192888.1| PREDICTED: AT-rich interactive domain-containing protein 3B,
partial [Taeniopygia guttata]
Length = 363
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ T+A+F LR Y
Sbjct: 55 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 114
Query: 61 LRDYE 65
L YE
Sbjct: 115 LYAYE 119
>gi|357614094|gb|EHJ68906.1| hypothetical protein KGM_11440 [Danaus plexippus]
Length = 375
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V ARGG+ ++I ++ W+E+ PS+ T+A+F LR Y
Sbjct: 64 LPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKY 123
Query: 61 LRDYE 65
L DYE
Sbjct: 124 LYDYE 128
>gi|449276493|gb|EMC84975.1| AT-rich interactive domain-containing protein 3A, partial [Columba
livia]
Length = 296
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 13/95 (13%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 32 IPIMAKQVLDLYTLYRLVTDKGGLVEVINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 91
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPD 95
L YE A+S+PG Q + D
Sbjct: 92 LYPYEC-------------EKRALSSPGELQAAID 113
>gi|363744293|ref|XP_003643014.1| PREDICTED: AT-rich interactive domain-containing protein 3A-like
[Gallus gallus]
Length = 452
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 153 IPIMAKQVLDLYTLYRLVTDKGGLVEVINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 212
Query: 61 LRDYE 65
L YE
Sbjct: 213 LYPYE 217
>gi|326934696|ref|XP_003213421.1| PREDICTED: AT-rich interactive domain-containing protein 3A-like,
partial [Meleagris gallopavo]
Length = 481
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 13/95 (13%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 193 IPIMAKQVLDLYTLYRLVTDKGGLVEVINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 252
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPD 95
L YE A+S+PG Q + D
Sbjct: 253 LYPYE-------------CEKRALSSPGELQAAID 274
>gi|118343725|ref|NP_001071682.1| protein dead ringer homolog [Ciona intestinalis]
gi|122049754|sp|Q4H3P5.1|DRI_CIOIN RecName: Full=Protein dead ringer homolog
gi|70569274|dbj|BAE06382.1| dead ringer homolog [Ciona intestinalis]
Length = 571
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL++L+ V +GG+ ++I ++ W+E+T N PS+ T+A+F LR Y
Sbjct: 273 IPIMAKQVLDLYQLYRLVVEKGGLVEVINKKIWREITKGLNLPSSITSAAFTLRTQYMKY 332
Query: 61 LRDYE 65
L +E
Sbjct: 333 LYPFE 337
>gi|189236343|ref|XP_975398.2| PREDICTED: similar to AGAP006990-PA [Tribolium castaneum]
Length = 1548
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLL 61
PI+GGKE+DLH L+ VT++GG K+ + W E+ P N S L++ Y L
Sbjct: 38 PILGGKEVDLHLLYTLVTSQGGWIKVNSKSGWTEILDQLRLPKECVNGSVALKQIYLRYL 97
Query: 62 RDYEQIYFF 70
+E+++F
Sbjct: 98 DRWEKVHFL 106
>gi|308159465|gb|EFO61994.1| ARID1 protein [Giardia lamblia P15]
Length = 462
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 11/99 (11%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLL 61
PI+G ++LD+++LF V ARGG + + + WKE+ P++ TNA + LR Y+S +
Sbjct: 36 PIVGHRQLDMYQLFRAVQARGGAKNVTQ---WKEIGKKLGLPASVTNAGYTLRTKYESYI 92
Query: 62 RDYEQIYFFR-SQDSWQGPSTN-------AVSAPGTAQP 92
YE+I Q + PS N ++SAP + P
Sbjct: 93 LPYEEILCSEFPQIEFADPSLNSTLRGVASISAPISLTP 131
>gi|393905765|gb|EJD74064.1| hypothetical protein LOAG_18567 [Loa loa]
Length = 340
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 9 LDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLLRDYE 65
LDL+ L+ V GG+ +II ++ W+E+T N PS+ T+A+F LR YQ L DYE
Sbjct: 6 LDLYELYRLVVQHGGLVEIINKKLWREITRGLNLPSSITSAAFTLRTQYQKYLYDYE 62
>gi|159117256|ref|XP_001708848.1| ARID1 AT-rich interaction domain [Giardia lamblia ATCC 50803]
gi|114803613|gb|ABI81170.1| ARID1 [Giardia intestinalis]
gi|157436962|gb|EDO81174.1| ARID1 AT-rich interaction domain protein [Giardia lamblia ATCC
50803]
Length = 469
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLL 61
PI+G ++LD+++LF V ARGG + + + WKE+ P++ TNA + LR Y+S +
Sbjct: 36 PIVGHRQLDMYQLFRAVQARGGAKNVTQ---WKEIGKKLGLPASVTNAGYTLRTKYESYI 92
Query: 62 RDYEQI 67
YE+I
Sbjct: 93 LPYEEI 98
>gi|410922194|ref|XP_003974568.1| PREDICTED: AT-rich interactive domain-containing protein 3A-like
[Takifugu rubripes]
Length = 532
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ V +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 212 IPIMAKQVLDLYMLYKLVVEKGGLVEVINKKIWREITRGLNLPTSITSAAFTLRTQYMKY 271
Query: 61 LRDYE 65
L YE
Sbjct: 272 LYPYE 276
>gi|395515313|ref|XP_003761850.1| PREDICTED: AT-rich interactive domain-containing protein 3C
[Sarcophilus harrisii]
Length = 421
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 13/91 (14%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ ++I + W+EVT + P++ T+A+F LR Y
Sbjct: 142 IPIMAKQVLDLYVLYRLVTEKGGLVEVINRKVWREVTRGLSLPTSITSAAFTLRTQYMKY 201
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQ 91
L YE T A+S+PG Q
Sbjct: 202 LYPYEC-------------ETRALSSPGELQ 219
>gi|126335024|ref|XP_001378753.1| PREDICTED: AT-rich interactive domain-containing protein 3C-like
[Monodelphis domestica]
Length = 457
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 13/91 (14%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ ++I + W+EVT + P++ T+A+F LR Y
Sbjct: 179 IPIMAKQVLDLYVLYRLVTEKGGLVEVINRKVWREVTRGLSLPTSITSAAFTLRTQYMKY 238
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQ 91
L YE T A+S+PG Q
Sbjct: 239 LYPYEC-------------ETRALSSPGELQ 256
>gi|302847869|ref|XP_002955468.1| hypothetical protein VOLCADRAFT_76727 [Volvox carteri f.
nagariensis]
gi|300259310|gb|EFJ43539.1| hypothetical protein VOLCADRAFT_76727 [Volvox carteri f.
nagariensis]
Length = 645
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 189 KSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAV 247
K E K +DP PK N +G+ +F ++K +PG EI +M+GE W + EKA
Sbjct: 544 KKERKPKDPNAPKKNLTGFMYFSNANREKVKAENPGIAFGEIGKMLGERWKGMGADEKAP 603
Query: 248 YQEKALKDKERYRIEMEDYRER 269
Y++ A KDK RY M+ Y+ER
Sbjct: 604 YEQMAAKDKVRYAEAMKAYKER 625
>gi|356506416|ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
Length = 614
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 179 SGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELW 237
SG ++ + KK K +DP PK SG+ FF + LK +PG ++ R++GE W
Sbjct: 509 SGDEKEKPAKKESNKEKDPNAPKRAMSGFMFFSKLERENLKKTNPGISFTDVGRVLGEKW 568
Query: 238 NKLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y+ KA +DK+RY E+ Y+
Sbjct: 569 KKLSAEEKEPYEAKAREDKKRYMDEISGYK 598
>gi|348512967|ref|XP_003444014.1| PREDICTED: AT-rich interactive domain-containing protein 3B-like
[Oreochromis niloticus]
Length = 574
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL++L+ VT +GG+ ++I ++ W+E+T + P++ T+A+F LR Y
Sbjct: 272 IPIMAKQVLDLYKLYKLVTEKGGLVEVINKKIWREITKGLSLPTSITSAAFTLRTQYMKY 331
Query: 61 LRDYE 65
L +E
Sbjct: 332 LYPFE 336
>gi|307214049|gb|EFN89252.1| Protein dead ringer [Harpegnathos saltator]
Length = 407
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V RGG+ ++I ++ W+E+ PS+ T+A+F LR Y+
Sbjct: 7 LPIMAKSVLDLYELYNLVIQRGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYRKY 66
Query: 61 LRDYE 65
L DYE
Sbjct: 67 LYDYE 71
>gi|76779566|gb|AAI06446.1| LOC733349 protein [Xenopus laevis]
Length = 490
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ ++I ++ W+E+T + P++ T+A+F LR Y
Sbjct: 242 IPIMAKQLLDLYMLYKLVTEKGGLVEVINKKIWREITKGLSLPTSITSAAFTLRTQYMKY 301
Query: 61 LRDYE 65
L YE
Sbjct: 302 LYIYE 306
>gi|350415404|ref|XP_003490629.1| PREDICTED: protein dead ringer-like [Bombus impatiens]
Length = 651
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V ARGG+ +I ++ W+E+ + PS+ T+A+F LR Y
Sbjct: 249 LPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKY 308
Query: 61 LRDYE 65
L YE
Sbjct: 309 LYPYE 313
>gi|195384209|ref|XP_002050810.1| GJ19993 [Drosophila virilis]
gi|194145607|gb|EDW62003.1| GJ19993 [Drosophila virilis]
Length = 969
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V ARGG+ +I ++ W+E+ + PS+ T+A+F LR Y
Sbjct: 318 LPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKY 377
Query: 61 LRDYE 65
L YE
Sbjct: 378 LYPYE 382
>gi|195347156|ref|XP_002040120.1| GM16032 [Drosophila sechellia]
gi|194135469|gb|EDW56985.1| GM16032 [Drosophila sechellia]
Length = 912
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V ARGG+ +I ++ W+E+ + PS+ T+A+F LR Y
Sbjct: 323 LPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKY 382
Query: 61 LRDYE 65
L YE
Sbjct: 383 LYPYE 387
>gi|195489242|ref|XP_002092653.1| GE14310 [Drosophila yakuba]
gi|194178754|gb|EDW92365.1| GE14310 [Drosophila yakuba]
Length = 897
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V ARGG+ +I ++ W+E+ + PS+ T+A+F LR Y
Sbjct: 305 LPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKY 364
Query: 61 LRDYE 65
L YE
Sbjct: 365 LYPYE 369
>gi|194755130|ref|XP_001959845.1| GF13069 [Drosophila ananassae]
gi|190621143|gb|EDV36667.1| GF13069 [Drosophila ananassae]
Length = 920
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V ARGG+ +I ++ W+E+ + PS+ T+A+F LR Y
Sbjct: 317 LPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKY 376
Query: 61 LRDYE 65
L YE
Sbjct: 377 LYPYE 381
>gi|328789498|ref|XP_001121514.2| PREDICTED: hypothetical protein LOC725697 [Apis mellifera]
Length = 650
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V ARGG+ +I ++ W+E+ + PS+ T+A+F LR Y
Sbjct: 248 LPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKY 307
Query: 61 LRDYE 65
L YE
Sbjct: 308 LYPYE 312
>gi|28573624|ref|NP_476864.2| retained, isoform A [Drosophila melanogaster]
gi|28380673|gb|AAF47037.3| retained, isoform A [Drosophila melanogaster]
Length = 906
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V ARGG+ +I ++ W+E+ + PS+ T+A+F LR Y
Sbjct: 312 LPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKY 371
Query: 61 LRDYE 65
L YE
Sbjct: 372 LYPYE 376
>gi|383851860|ref|XP_003701449.1| PREDICTED: uncharacterized protein LOC100879586 [Megachile
rotundata]
Length = 664
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V ARGG+ +I ++ W+E+ + PS+ T+A+F LR Y
Sbjct: 254 LPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKY 313
Query: 61 LRDYE 65
L YE
Sbjct: 314 LYPYE 318
>gi|1480740|gb|AAB05771.1| dead ringer [Drosophila melanogaster]
Length = 901
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V ARGG+ +I ++ W+E+ + PS+ T+A+F LR Y
Sbjct: 305 LPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKY 364
Query: 61 LRDYE 65
L YE
Sbjct: 365 LYPYE 369
>gi|195586108|ref|XP_002082820.1| GD11780 [Drosophila simulans]
gi|194194829|gb|EDX08405.1| GD11780 [Drosophila simulans]
Length = 873
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V ARGG+ +I ++ W+E+ + PS+ T+A+F LR Y
Sbjct: 307 LPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKY 366
Query: 61 LRDYE 65
L YE
Sbjct: 367 LYPYE 371
>gi|195122022|ref|XP_002005511.1| GI19027 [Drosophila mojavensis]
gi|193910579|gb|EDW09446.1| GI19027 [Drosophila mojavensis]
Length = 989
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V ARGG+ +I ++ W+E+ + PS+ T+A+F LR Y
Sbjct: 318 LPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKY 377
Query: 61 LRDYE 65
L YE
Sbjct: 378 LYPYE 382
>gi|195455234|ref|XP_002074624.1| GK23065 [Drosophila willistoni]
gi|194170709|gb|EDW85610.1| GK23065 [Drosophila willistoni]
Length = 925
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V ARGG+ +I ++ W+E+ + PS+ T+A+F LR Y
Sbjct: 318 LPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKY 377
Query: 61 LRDYE 65
L YE
Sbjct: 378 LYPYE 382
>gi|339253604|ref|XP_003372025.1| protein dead ringer [Trichinella spiralis]
gi|316967623|gb|EFV52030.1| protein dead ringer [Trichinella spiralis]
Length = 450
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ V A GG+ ++I ++ W+E+T + P + T+A+F LR Y
Sbjct: 157 IPIMAKQVLDLYELYRLVIAHGGLVEVINKKLWREITKGLHLPQSITSAAFTLRTQYMKY 216
Query: 61 LRDYE 65
L YE
Sbjct: 217 LYPYE 221
>gi|195154639|ref|XP_002018229.1| GL16874 [Drosophila persimilis]
gi|194114025|gb|EDW36068.1| GL16874 [Drosophila persimilis]
Length = 923
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V ARGG+ +I ++ W+E+ + PS+ T+A+F LR Y
Sbjct: 323 LPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKY 382
Query: 61 LRDYE 65
L YE
Sbjct: 383 LYPYE 387
>gi|28573626|ref|NP_788434.1| retained, isoform B [Drosophila melanogaster]
gi|46397407|sp|Q24573.2|DRI_DROME RecName: Full=Protein dead ringer; AltName: Full=Protein retained
gi|21430274|gb|AAM50815.1| LD35748p [Drosophila melanogaster]
gi|28380672|gb|AAO41347.1| retained, isoform B [Drosophila melanogaster]
Length = 911
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V ARGG+ +I ++ W+E+ + PS+ T+A+F LR Y
Sbjct: 317 LPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKY 376
Query: 61 LRDYE 65
L YE
Sbjct: 377 LYPYE 381
>gi|198458559|ref|XP_001361086.2| GA18855 [Drosophila pseudoobscura pseudoobscura]
gi|198136385|gb|EAL25662.2| GA18855 [Drosophila pseudoobscura pseudoobscura]
Length = 931
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V ARGG+ +I ++ W+E+ + PS+ T+A+F LR Y
Sbjct: 331 LPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKY 390
Query: 61 LRDYE 65
L YE
Sbjct: 391 LYPYE 395
>gi|195026115|ref|XP_001986185.1| GH20664 [Drosophila grimshawi]
gi|193902185|gb|EDW01052.1| GH20664 [Drosophila grimshawi]
Length = 987
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V ARGG+ +I ++ W+E+ + PS+ T+A+F LR Y
Sbjct: 336 LPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKY 395
Query: 61 LRDYE 65
L YE
Sbjct: 396 LYPYE 400
>gi|124805429|ref|XP_001350438.1| high mobility group protein [Plasmodium falciparum 3D7]
gi|6525222|gb|AAF15357.1|AF201952_1 high mobility group protein [Plasmodium falciparum]
gi|23496560|gb|AAN36118.1|AE014844_29 high mobility group protein [Plasmodium falciparum 3D7]
Length = 97
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 179 SGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREIS---RMIGE 235
+G + R+RRK ++DP PK + S Y FF E+ A + P ++++ +MIGE
Sbjct: 4 TGKEVRKRRKN----KKDPHAPKRSLSAYMFFAKEKRAEIISKQPELSKDVATVGKMIGE 59
Query: 236 LWNKLKESEKAVYQEKALKDKERYRIEMEDY 266
WNKL E EKA +++KA +DK RY E +Y
Sbjct: 60 AWNKLGEKEKAPFEKKAQEDKLRYEKEKAEY 90
>gi|345497783|ref|XP_001600051.2| PREDICTED: hypothetical protein LOC100115281 [Nasonia vitripennis]
Length = 687
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V ARGG+ +I ++ W+E+ + PS+ T+A+F LR Y
Sbjct: 285 LPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKY 344
Query: 61 LRDYE 65
L YE
Sbjct: 345 LYPYE 349
>gi|339252276|ref|XP_003371361.1| cuticle collagen rol-6 [Trichinella spiralis]
gi|316968416|gb|EFV52694.1| cuticle collagen rol-6 [Trichinella spiralis]
Length = 1465
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLL 61
P + + +DLH+L++ V ARGG E++ K++ W+++ IFN + +AS L+K Y L
Sbjct: 336 PTVSKQTVDLHKLYMAVKARGGFEEVTKKKYWRDLCVIFNI-GVSNSASGQLKKQYSRFL 394
Query: 62 RDYEQIY 68
+E +Y
Sbjct: 395 FPFECVY 401
>gi|340710511|ref|XP_003393831.1| PREDICTED: hypothetical protein LOC100645822 [Bombus terrestris]
Length = 654
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V ARGG+ +I ++ W+E+ + PS+ T+A+F LR Y
Sbjct: 249 LPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKY 308
Query: 61 LRDYE 65
L YE
Sbjct: 309 LYPYE 313
>gi|345327712|ref|XP_001511823.2| PREDICTED: AT-rich interactive domain-containing protein 3B-like
[Ornithorhynchus anatinus]
Length = 535
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T + P++ T+A+F LR Y
Sbjct: 137 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLHLPTSITSAAFTLRTQYMKY 196
Query: 61 LRDYE 65
L YE
Sbjct: 197 LYAYE 201
>gi|380026567|ref|XP_003697021.1| PREDICTED: uncharacterized protein LOC100871589 [Apis florea]
Length = 510
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V ARGG+ +I ++ W+E+ + PS+ T+A+F LR Y
Sbjct: 225 LPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKY 284
Query: 61 LRDYE 65
L YE
Sbjct: 285 LYPYE 289
>gi|158292668|ref|XP_001688509.1| AGAP005156-PA [Anopheles gambiae str. PEST]
gi|157017100|gb|EDO64092.1| AGAP005156-PA [Anopheles gambiae str. PEST]
Length = 955
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V ARGG+ +I ++ W+E+ + PS+ T+A+F LR Y
Sbjct: 303 LPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKY 362
Query: 61 LRDYE 65
L YE
Sbjct: 363 LYPYE 367
>gi|345484642|ref|XP_001605590.2| PREDICTED: hypothetical protein LOC100121989 [Nasonia vitripennis]
Length = 1946
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
P I GKE+DL++L+ VTARGG ++ + W + F+ PS N+ L++ Y
Sbjct: 45 CPRIDGKEVDLYKLYTVVTARGGWIQVNNKNEWVWLCEEFHLPSGCVNSGVGLKQIYLRY 104
Query: 61 LRDYEQIYFFRSQDSWQG 78
L YE+++F +D QG
Sbjct: 105 LDRYEKVHFL-GEDGHQG 121
>gi|145356938|ref|XP_001422680.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582923|gb|ABP00997.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 622
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 194 RRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKA 252
++DP PK S Y FF A + A + +P ++++ +GE W + + EK+VYQ++A
Sbjct: 517 KKDPNAPKRGLSAYMFFSAAKRAEITAANPSFGVTDVAKALGEKWKTITDEEKSVYQQQA 576
Query: 253 LKDKERYRIEMEDYR 267
+DK RY EME YR
Sbjct: 577 DEDKIRYEREMEAYR 591
>gi|156101624|ref|XP_001616505.1| high mobility group protein [Plasmodium vivax Sal-1]
gi|148805379|gb|EDL46778.1| high mobility group protein, putative [Plasmodium vivax]
Length = 107
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 7/92 (7%)
Query: 178 VSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREIS---RMIG 234
+ G + R+RRK ++DP PK + S Y FF E+ A + P ++++ +MIG
Sbjct: 13 MGGKEVRKRRKN----KKDPHAPKRSLSAYMFFAKEKRAEIISRDPDLSKDVATVGKMIG 68
Query: 235 ELWNKLKESEKAVYQEKALKDKERYRIEMEDY 266
E WNKL E EKA Y++KA +DK RY E +Y
Sbjct: 69 EAWNKLDEREKAPYEKKAQEDKLRYEREKVEY 100
>gi|66820012|ref|XP_643660.1| ARID/BRIGHT DNA binding domain-containing protein [Dictyostelium
discoideum AX4]
gi|60471777|gb|EAL69732.1| ARID/BRIGHT DNA binding domain-containing protein [Dictyostelium
discoideum AX4]
Length = 478
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI KEL+L++L+ V +RGG+E +I + W+++T T+A F LR +Y
Sbjct: 66 IPIFDHKELNLYKLYNCVISRGGLEAVIDNKLWRQITTDLAVDPERTDAGFRLRIHYLKY 125
Query: 61 LRDYEQIYFFRSQDSWQ 77
L YE+ ++ + +D Q
Sbjct: 126 LYPYERKHYLKIEDDEQ 142
>gi|170591488|ref|XP_001900502.1| High mobility group protein 1.2 [Brugia malayi]
gi|158592114|gb|EDP30716.1| High mobility group protein 1.2, putative [Brugia malayi]
Length = 235
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 172 NATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHP-GKDREIS 230
A A G R+RK+ ++DP PK S + FF ++ ++ HP K +++
Sbjct: 90 QAEVAAYGGEDALRKRKRV---KKDPNAPKRALSAFFFFSHDKRPEVQQQHPEWKVGQVA 146
Query: 231 RMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYR 267
+ +G W L E E+AVY+ KAL+DKERY EM +Y+
Sbjct: 147 QELGRFWKALGEEERAVYERKALEDKERYAEEMRNYK 183
>gi|389585513|dbj|GAB68243.1| high mobility group protein [Plasmodium cynomolgi strain B]
Length = 107
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 7/92 (7%)
Query: 178 VSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREIS---RMIG 234
+ G + R+RRK ++DP PK + S Y FF E+ A + P ++++ +MIG
Sbjct: 13 MGGKEVRKRRKN----KKDPHAPKRSLSAYMFFAKEKRAEIISRDPDLSKDVATVGKMIG 68
Query: 235 ELWNKLKESEKAVYQEKALKDKERYRIEMEDY 266
E WNKL E EKA Y++KA +DK RY E +Y
Sbjct: 69 EAWNKLDELEKAPYEKKAQEDKVRYEREKVEY 100
>gi|221059780|ref|XP_002260535.1| High mobility group protein [Plasmodium knowlesi strain H]
gi|193810609|emb|CAQ42507.1| High mobility group protein, putative [Plasmodium knowlesi strain
H]
Length = 104
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 7/92 (7%)
Query: 178 VSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREIS---RMIG 234
+ G + R+RRK ++DP PK + S Y FF E+ A + P ++++ +MIG
Sbjct: 10 MGGKEVRKRRKN----KKDPHAPKRSLSAYMFFAKEKRAEIISRDPDLSKDVATVGKMIG 65
Query: 235 ELWNKLKESEKAVYQEKALKDKERYRIEMEDY 266
E WNKL E EKA Y++KA +DK RY E +Y
Sbjct: 66 EAWNKLDEREKAPYEKKAQEDKVRYEREKVEY 97
>gi|68063985|ref|XP_673987.1| high mobility group protein [Plasmodium berghei strain ANKA]
gi|56492229|emb|CAH99818.1| high mobility group protein, putative [Plasmodium berghei]
Length = 96
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
Query: 181 VQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREIS---RMIGELW 237
V++RR+ KK DP PK + S Y FF E+ A + P ++++ +MIGE W
Sbjct: 8 VKKRRKNKK------DPHAPKRSLSAYMFFAKEKRAEIITRDPSLSKDVATVGKMIGEAW 61
Query: 238 NKLKESEKAVYQEKALKDKERYRIEMEDY 266
NKL E EKA Y++KA +DK RY E +Y
Sbjct: 62 NKLDEREKAPYEKKAQEDKIRYEKEKMEY 90
>gi|303271917|ref|XP_003055320.1| ARID/BRIGHT DNA binding domain protein [Micromonas pusilla
CCMP1545]
gi|226463294|gb|EEH60572.1| ARID/BRIGHT DNA binding domain protein [Micromonas pusilla
CCMP1545]
Length = 738
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTA-TNASFVLRKYYQS 59
+PI + LDL +++VEV ARGG +++ K +RW EV+ T T+A F +RK Y++
Sbjct: 123 VPIFAHRALDLRKVYVEVRARGGHDEVCKHKRWLEVSRTLGVNLTGLTSAGFQMRKNYEA 182
Query: 60 LLRDYEQ 66
L YE+
Sbjct: 183 CLLAYER 189
>gi|221117725|ref|XP_002160328.1| PREDICTED: uncharacterized protein LOC100208019 [Hydra
magnipapillata]
Length = 524
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL++L+ V GG+ ++I+ ++W ++T N P++ T+A+F LR Y
Sbjct: 147 IPIMAKQILDLYQLYNLVVKHGGLVQVIRNKQWSKITKGLNLPTSITSAAFTLRTQYLKY 206
Query: 61 LRDYE 65
L YE
Sbjct: 207 LYAYE 211
>gi|157118306|ref|XP_001653162.1| Brahma associated protein 170kD, putative [Aedes aegypti]
gi|108883285|gb|EAT47510.1| AAEL001361-PA, partial [Aedes aegypti]
Length = 1671
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLL 61
P IGG+++DLHRL++ V ARGG K+ W EV P N L++ Y L
Sbjct: 20 PKIGGRDVDLHRLYMVVIARGGWLKVNSREDWDEVIEELKLPKRCVNNEIALKQIYIRYL 79
Query: 62 RDYEQIYF 69
YE+I F
Sbjct: 80 DKYERITF 87
>gi|47213280|emb|CAF92132.1| unnamed protein product [Tetraodon nigroviridis]
Length = 102
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ V +GG+ ++I ++ W+E+T N P++ T+A+F LR Y
Sbjct: 7 IPIMAKQVLDLYMLYKLVVEKGGLVEVINKKIWREITKGLNLPTSITSAAFTLRTQYMKY 66
Query: 61 LRDYE 65
L YE
Sbjct: 67 LYPYE 71
>gi|270010978|gb|EFA07426.1| retained [Tribolium castaneum]
Length = 567
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V ARGG+ +I ++ W+E+ + PS+ T+A+F LR Y
Sbjct: 62 LPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKY 121
Query: 61 LRDYE 65
L YE
Sbjct: 122 LYPYE 126
>gi|427778869|gb|JAA54886.1| Putative at-rich interactive domain-containing protein 2
[Rhipicephalus pulchellus]
Length = 244
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLL 61
P I G+E+DL L+ VTA GG +K+ +W V NFP NAS LR+ Y L
Sbjct: 37 PRINGREVDLFALYNSVTAIGGWQKVNDLLKWDYVLDKLNFPKACANASLALRQVYVRYL 96
Query: 62 RDYEQIYFF 70
+E+++F
Sbjct: 97 SLFEKVHFL 105
>gi|70946314|ref|XP_742884.1| high mobility group protein [Plasmodium chabaudi chabaudi]
gi|56522109|emb|CAH79930.1| high mobility group protein, putative [Plasmodium chabaudi
chabaudi]
Length = 102
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
Query: 181 VQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREIS---RMIGELW 237
V++RR+ KK DP PK + S Y FF E+ A + P ++++ +MIGE W
Sbjct: 14 VKKRRKNKK------DPHAPKRSLSAYMFFAKEKRAEIITRDPSLSKDVATVGKMIGEAW 67
Query: 238 NKLKESEKAVYQEKALKDKERYRIEMEDY 266
NKL E EKA Y++KA +DK RY E +Y
Sbjct: 68 NKLDEREKAPYEKKAQEDKLRYEKEKMEY 96
>gi|349604600|gb|AEQ00107.1| High mobility group protein B3-like protein, partial [Equus
caballus]
Length = 118
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEK 251
K++DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y K
Sbjct: 3 KKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNK 62
Query: 252 ALKDKERYRIEMEDYRERLK 271
A K KE+Y ++ DY+ + K
Sbjct: 63 AAKLKEKYEKDVADYKSKGK 82
>gi|300122042|emb|CBK22616.2| unnamed protein product [Blastocystis hominis]
Length = 224
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 186 RRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESE 244
+R K E+ DP PK SGY + EQ ++K +P K EIS+++GE W +L E E
Sbjct: 15 KRGKKEV---DPDKPKKPLSGYMRYCNEQREQVKKENPELKLTEISKVLGEKWKELSEEE 71
Query: 245 KAVYQEKALKDKERYRIEMEDYRERLKTGQVISD 278
K YQ+ DKE+Y ++ME+Y++ TG+ +D
Sbjct: 72 KKPYQDAYEADKEKYDLQMEEYKKTHPTGKKNAD 105
>gi|91087509|ref|XP_968902.1| PREDICTED: similar to GA18855-PA [Tribolium castaneum]
Length = 917
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V ARGG+ +I ++ W+E+ + PS+ T+A+F LR Y
Sbjct: 178 LPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKY 237
Query: 61 LRDYE 65
L YE
Sbjct: 238 LYPYE 242
>gi|312075672|ref|XP_003140521.1| high mobility group protein 1.2 [Loa loa]
gi|307764316|gb|EFO23550.1| high mobility group protein 1.2 [Loa loa]
Length = 211
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 172 NATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHP-GKDREIS 230
A A G R+RK+ ++DP PK S + FF ++ ++ HP K +++
Sbjct: 72 QAEVAAYGGEDALRKRKRV---KKDPNAPKRALSAFFFFSHDKRPEVQQQHPEWKVGQVA 128
Query: 231 RMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYR 267
+ +G W L E E+AVY+ KAL+DKERY EM +Y+
Sbjct: 129 QELGRFWKALGEEERAVYERKALEDKERYAEEMRNYK 165
>gi|313244468|emb|CBY15254.1| unnamed protein product [Oikopleura dioica]
Length = 177
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
I ++ + LDL+ L+ VT RGG+ ++I+ + W+E+T N PS+ T+A+F LR Y
Sbjct: 56 IALMAKQVLDLYCLYKLVTERGGLVEVIQRKIWREITKGLNLPSSITSAAFTLRTQYMKY 115
Query: 61 LRDYE 65
L YE
Sbjct: 116 LYPYE 120
>gi|355669398|gb|AER94514.1| AT rich interactive domain 3B [Mustela putorius furo]
Length = 86
Score = 57.8 bits (138), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 41/65 (63%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IPI+ + LDL+ L+ VT +GG+ +II ++ W+E+T N P++ +A+F LR Y
Sbjct: 14 IPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSIPSAAFTLRTQYMKY 73
Query: 61 LRDYE 65
L YE
Sbjct: 74 LYAYE 78
>gi|351699754|gb|EHB02673.1| AT-rich interactive domain-containing protein 3C [Heterocephalus
glaber]
Length = 335
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 39/56 (69%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKY 56
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR +
Sbjct: 136 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTH 191
>gi|194885468|ref|XP_001976441.1| GG22872 [Drosophila erecta]
gi|190659628|gb|EDV56841.1| GG22872 [Drosophila erecta]
Length = 905
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V RGG+ +I ++ W+E+ + PS+ T+A+F LR Y
Sbjct: 312 LPIMAKSVLDLYELYNLVITRGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKY 371
Query: 61 LRDYE 65
L YE
Sbjct: 372 LYPYE 376
>gi|196002573|ref|XP_002111154.1| hypothetical protein TRIADDRAFT_54817 [Trichoplax adhaerens]
gi|190587105|gb|EDV27158.1| hypothetical protein TRIADDRAFT_54817 [Trichoplax adhaerens]
Length = 1137
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 3 IIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPST-ATNASFVLRKYYQSLL 61
+ GKE+DL L+ +VT+ GG ++ +R+W E+ P+ N+S+ LR++Y
Sbjct: 41 VFAGKEVDLAALYRKVTSCGGCAQVTSQRKWTEIAEALKLPADGCVNSSYALRQFYLRYF 100
Query: 62 RDYEQIYFF 70
+ YE+ FF
Sbjct: 101 KIYEKTNFF 109
>gi|313235918|emb|CBY11305.1| unnamed protein product [Oikopleura dioica]
Length = 170
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
I ++ + LDL+ L+ VT RGG+ ++I+ + W+E+T N PS+ T+A+F LR Y
Sbjct: 53 IALMAKQVLDLYCLYKLVTERGGLVEVIQRKIWREITKGLNLPSSITSAAFTLRTQYMKY 112
Query: 61 LRDYE 65
L YE
Sbjct: 113 LYPYE 117
>gi|328697850|ref|XP_001945762.2| PREDICTED: hypothetical protein LOC100161479 [Acyrthosiphon pisum]
Length = 1510
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLL 61
P I GK++DL+ L+V VTA+GG K+ + WK + F+ S+ NA L++ Y L
Sbjct: 38 PKIDGKDIDLYLLYVLVTAQGGWVKVNQRNDWKNLLENFDLLSSCINAEVALKQIYLRYL 97
Query: 62 RDYEQIYFFRSQDSWQG 78
YE+I F S G
Sbjct: 98 DRYEKINFLGETGSIAG 114
>gi|332017611|gb|EGI58308.1| Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat
subunit A [Acromyrmex echinatior]
Length = 1249
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 5/162 (3%)
Query: 152 QAPQYPIHQVPSSYNVINNNNATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFF 211
A + P+ + + + +N A + R KK + RD P+ SGY F
Sbjct: 29 HAVKSPVSTEEKAPDSVCDNGVKRSATATGNTPNRTKKRKKAPRDATAPRQPLSGYFLFL 88
Query: 212 AEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRE-- 268
++ +++ +P EI++++ W+KL +K Y + A +DKERY E DY++
Sbjct: 89 NDRREKVRNQNPSLTFTEITKLLAAEWSKLPIDQKQRYLDAAEQDKERYNREFSDYKQTE 148
Query: 269 --RLKTGQVISDAIPLQQRLPGADVDMVEVDTKLDETGGDSP 308
RL + ++ G D++ + D D TG D P
Sbjct: 149 AYRLFNEKQSERQNENKKERNGTDINTEQNDKDNDFTGFDIP 190
>gi|260802030|ref|XP_002595896.1| hypothetical protein BRAFLDRAFT_235451 [Branchiostoma floridae]
gi|229281148|gb|EEN51908.1| hypothetical protein BRAFLDRAFT_235451 [Branchiostoma floridae]
Length = 89
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLR 54
IPI+ + LDL++LF V RGG+ ++I ++ W+E+T N PS+ T+A+F LR
Sbjct: 34 IPIMAKQTLDLYQLFNLVVERGGLVEVINKKLWREITKGLNLPSSITSAAFTLR 87
>gi|338719597|ref|XP_003364026.1| PREDICTED: LOW QUALITY PROTEIN: AT-rich interactive
domain-containing protein 3C-like [Equus caballus]
Length = 341
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLR 54
+PI+ + LDL+ LF VTA+GG+ ++I + W+EVT + P+T T+A+F LR
Sbjct: 137 VPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLR 190
>gi|321465716|gb|EFX76716.1| hypothetical protein DAPPUDRAFT_3993 [Daphnia pulex]
Length = 125
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ L+ V ARGG+ +I ++ W+E+ + PS+ T+A+F LR Y
Sbjct: 32 LPIMAKQVLDLYELYNLVVARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKY 91
Query: 61 LRDYE 65
L YE
Sbjct: 92 LYPYE 96
>gi|405965170|gb|EKC30576.1| dead ringer-like protein [Crassostrea gigas]
Length = 503
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 1 IPIIGGKELDLHRLF-VEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQS 59
IPI+ + LDL+ L + V ++GG+ ++I ++ W+E+T N PS+ T+A+F LR Y
Sbjct: 211 IPIMAKQTLDLYELSRLLVVSKGGLVEVINKKLWREITKGLNLPSSITSAAFTLRTQYMK 270
Query: 60 LLRDYE 65
L YE
Sbjct: 271 YLYPYE 276
>gi|50304233|ref|XP_452066.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74636989|sp|Q6CVH3.1|NHP6_KLULA RecName: Full=Non-histone chromosomal protein 6
gi|49641198|emb|CAH02459.1| KLLA0B12056p [Kluyveromyces lactis]
Length = 93
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 187 RKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEK 245
RKK++ K++DP PK S Y FF E ++ +PG ++ R++GE W L E EK
Sbjct: 5 RKKTQRKKKDPNAPKRALSAYMFFANENRDIVRAENPGITFGQVGRILGEKWKALNEDEK 64
Query: 246 AVYQEKALKDKERYRIEMEDY 266
A Y+ KA DK+RY E E Y
Sbjct: 65 APYEAKAEADKKRYESEKELY 85
>gi|154318369|ref|XP_001558503.1| hypothetical protein BC1G_03352 [Botryotinia fuckeliana B05.10]
gi|347837613|emb|CCD52185.1| similar to transcription factor HMG [Botryotinia fuckeliana]
Length = 224
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 179 SGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELW 237
S + R +R + KR+DP+ PK S Y F+ +QH R++ +P ++ ++GE W
Sbjct: 134 SNLARHFQRISLQNKRKDPSAPKRGISAYMFYANDQHDRVRQENPALSFGQLGILLGEEW 193
Query: 238 NKLKESEKAVYQEKALKDKERYRIEMEDYR 267
L +++VY+E A KD RY E+ YR
Sbjct: 194 RALSVGQRSVYEEMATKDLRRYEEELARYR 223
>gi|156396934|ref|XP_001637647.1| predicted protein [Nematostella vectensis]
gi|156224761|gb|EDO45584.1| predicted protein [Nematostella vectensis]
Length = 124
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 41/65 (63%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL++LF V +GG+ ++I ++ W+E+ N P++ T+A+F LR Y
Sbjct: 40 VPIMAKQTLDLYKLFRLVVDKGGLVEVINKKIWREIIKGLNLPASVTSAAFTLRTQYMKY 99
Query: 61 LRDYE 65
L YE
Sbjct: 100 LYPYE 104
>gi|357494929|ref|XP_003617753.1| hypothetical protein MTR_5g095070 [Medicago truncatula]
gi|355519088|gb|AET00712.1| hypothetical protein MTR_5g095070 [Medicago truncatula]
Length = 301
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 9 LDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLLRDYEQIY 68
LDL+ ++EVT RGG ++ +E++W EV + + Y LL ++E++Y
Sbjct: 58 LDLYLFYLEVTRRGGYHQVGQEKKWSEVVSALKLEGNNATLCAQVENLYGYLLYEFEKLY 117
Query: 69 FFRSQDSWQGPSTNAVSAPG 88
F+RS P+T + PG
Sbjct: 118 FYRS------PATGTTTGPG 131
>gi|82594869|ref|XP_725606.1| high mobility group protein [Plasmodium yoelii yoelii 17XNL]
gi|23480678|gb|EAA17171.1| high mobility group protein [Plasmodium yoelii yoelii]
Length = 105
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 178 VSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREIS---RMIG 234
+ G + + RRK +DP PK + S Y FF E+ A + P ++++ +MIG
Sbjct: 12 MGGKEVKXRRKNX----KDPHAPKRSLSAYMFFAKEKRAEIITRDPSLSKDVATVGKMIG 67
Query: 235 ELWNKLKESEKAVYQEKALKDKERYRIEMEDY 266
E WNKL E EKA Y++KA +DK RY E +Y
Sbjct: 68 EAWNKLDEREKAPYEKKAQEDKIRYEKEKMEY 99
>gi|328791607|ref|XP_001120115.2| PREDICTED: hypothetical protein LOC724311 [Apis mellifera]
Length = 1812
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLL 61
P I GK++DL+ L+V VTA GG K+ W + F+ P+ N+ L++ Y L
Sbjct: 38 PKINGKDIDLYLLYVVVTAHGGWIKVNTRNEWASLCEQFHLPNGCVNSGVGLKQIYLRYL 97
Query: 62 RDYEQIYFF 70
YE+++F
Sbjct: 98 DRYEKVHFL 106
>gi|348678094|gb|EGZ17911.1| hypothetical protein PHYSODRAFT_300810 [Phytophthora sojae]
Length = 557
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 87/193 (45%), Gaps = 19/193 (9%)
Query: 87 PGTAQPSPDIQSAVQQPRINAAVLPEARPASSGGSPVIGVIDGKFESGYLVTVTIGS--- 143
P A +PD+ SA++ P + P +PA + + ES L+ +TI
Sbjct: 170 PTLAATTPDMLSALKTP-LKDPFAP--KPAKTAFQLFMS---HNRESFMLLNMTINEFRA 223
Query: 144 --ETLKGVLYQAPQYPIHQVPSS----YNV-INNNNATAHAVSGVQRRRRRKKS--EIKR 194
L L A + H++ Y+ +N A+ VQR +R + + R
Sbjct: 224 EMSQLWKRLSDADKAEWHELAKEDQRRYDTEMNAYKPPAYMDLVVQRSHKRMEELRRLAR 283
Query: 195 RDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKAL 253
D A P+ + YN + + + L PG K+ EI R IG W L + E+AVYQ KA
Sbjct: 284 EDSAAPRLPMNAYNCYLSAKRQELVDRRPGRKNPEIMREIGVTWKALSDDERAVYQRKAD 343
Query: 254 KDKERYRIEMEDY 266
+D ER+R EME +
Sbjct: 344 EDVERFRAEMEAH 356
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKA 252
K+R P+ ++ YN + + L + E S + G+LW ++ E+E+ Y+ A
Sbjct: 407 KKRKSGPPRRPKTAYNLMYMSKRTELLSTYQMSHNECSALCGKLWRQMSEAEREPYKRMA 466
Query: 253 LKDKERYRIEMEDY 266
+DK RY E++ Y
Sbjct: 467 AEDKHRYEAELQVY 480
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 195 RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALK 254
+DP PKP ++ + F + L+ + E + +LW +L +++KA + E A +
Sbjct: 188 KDPFAPKPAKTAFQLFMSHNRESFMLLNMTIN-EFRAEMSQLWKRLSDADKAEWHELAKE 246
Query: 255 DKERYRIEMEDYR 267
D+ RY EM Y+
Sbjct: 247 DQRRYDTEMNAYK 259
>gi|340729344|ref|XP_003402964.1| PREDICTED: AT-rich interactive domain-containing protein 2-like
[Bombus terrestris]
Length = 1822
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLL 61
P I GK++DL+ L+V VTA GG K+ W + F+ P+ N+ L++ Y L
Sbjct: 38 PKINGKDIDLYLLYVVVTAHGGWIKVNTRNEWASLCEQFHLPNGCVNSGVGLKQIYLRYL 97
Query: 62 RDYEQIYFF 70
YE+++F
Sbjct: 98 DRYEKVHFL 106
>gi|350417762|ref|XP_003491582.1| PREDICTED: hypothetical protein LOC100743907 [Bombus impatiens]
Length = 1832
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLL 61
P I GK++DL+ L+V VTA GG K+ W + F+ P+ N+ L++ Y L
Sbjct: 38 PKINGKDIDLYLLYVVVTAHGGWIKVNTRNEWASLCEQFHLPNGCVNSGVGLKQIYLRYL 97
Query: 62 RDYEQIYFF 70
YE+++F
Sbjct: 98 DRYEKVHFL 106
>gi|380017148|ref|XP_003692524.1| PREDICTED: uncharacterized protein LOC100871810 [Apis florea]
Length = 1814
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLL 61
P I GK++DL+ L+V VTA GG K+ W + F+ P+ N+ L++ Y L
Sbjct: 38 PKINGKDIDLYLLYVVVTAHGGWIKVNTRNEWASLCEQFHLPNGCVNSGVGLKQIYLRYL 97
Query: 62 RDYEQIYFF 70
YE+++F
Sbjct: 98 DRYEKVHFL 106
>gi|253722763|pdb|1C20|A Chain A, Solution Structure Of The Dna-Binding Domain From The Dead
Ringer Protein
Length = 128
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V ARGG+ +I ++ W+E+ + PS+ T+A+F LR Y
Sbjct: 44 LPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKY 103
Query: 61 LRDYE 65
L YE
Sbjct: 104 LYPYE 108
>gi|70999478|ref|XP_754458.1| nucleosome binding protein (Nhp6a) [Aspergillus fumigatus Af293]
gi|74674416|sp|Q4WY33.1|NHP6_ASPFU RecName: Full=Non-histone chromosomal protein 6
gi|66852095|gb|EAL92420.1| nucleosome binding protein (Nhp6a), putative [Aspergillus fumigatus
Af293]
gi|159127475|gb|EDP52590.1| nucleosome binding protein (Nhp6a), putative [Aspergillus fumigatus
A1163]
Length = 104
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 184 RRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKE 242
R + K+ E K++DP PK S Y FF E +++ +PG ++ +M+GE W L +
Sbjct: 9 RTKTKRVERKKKDPNAPKRGLSAYMFFANENRDKVREENPGISFGQVGKMLGERWKALSD 68
Query: 243 SEKAVYQEKALKDKERYRIEMEDY 266
SE+ Y+EKA DK+RY E Y
Sbjct: 69 SERRPYEEKAAADKKRYEDEKASY 92
>gi|392333067|ref|XP_003752781.1| PREDICTED: high mobility group protein B3-like [Rattus norvegicus]
gi|392353165|ref|XP_001067503.2| PREDICTED: high mobility group protein B3-like [Rattus norvegicus]
Length = 212
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDRE-ISRMIGELWNKLKESEKAVYQEK 251
K++DP PK SG+ F +E ++K +PG E + + +GE+WN L +SEK Y K
Sbjct: 100 KKKDPNAPKRPPSGFFLFCSEFRPKIKSANPGISIEDVVKKLGEMWNNLSDSEKQPYMTK 159
Query: 252 ALKDKERYRIEMEDYR 267
A K KE+Y ++ DY+
Sbjct: 160 AAKLKEKYEKDVADYK 175
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H P P E S+ E W + EK+ + E A DK RY
Sbjct: 28 SAYAFFVQTCREEHKTKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYGR 87
Query: 262 EMEDYRERLKTGQVISD 278
EM+DY E K G+ D
Sbjct: 88 EMKDY-ESAKGGKKKKD 103
>gi|440911425|gb|ELR61099.1| High mobility group protein B3, partial [Bos grunniens mutus]
Length = 192
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEK 251
K++DP PK SG F +E H ++K HPG R++++ +GE+WN L +SEK Y K
Sbjct: 87 KKKDPKAPKRLPSGCLLFCSEFHPKIKSTHPGISIRDVAKKLGEMWNNLSDSEKQPYINK 146
Query: 252 ALKDKERYRIEMEDYRERLK 271
A K K +Y ++ D++ R K
Sbjct: 147 AAKLK-KYEKDVADHKSRGK 165
>gi|291227342|ref|XP_002733645.1| PREDICTED: AT rich interactive domain 1A-like [Saccoglossus
kowalevskii]
Length = 2269
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
P++ LDL++L+ V +GG ++ + ++WK++ A+ N S+ T A+F LRK Y
Sbjct: 1051 CPMMSNTTLDLYKLYKCVKDKGGAAEVSRHKQWKDICAVMNIGSSNT-AAFTLRKNYNKY 1109
Query: 61 LRDYE 65
L YE
Sbjct: 1110 LLSYE 1114
>gi|397631195|gb|EJK70063.1| hypothetical protein THAOC_08612 [Thalassiosira oceanica]
Length = 827
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 182 QRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKL 240
+R+ K + K+RDP PK +S Y FF + + + +K +P +IS+++G+ + +L
Sbjct: 581 KRKAEPSKQKKKKRDPNAPKAPKSAYVFFTSAKRSEIKEANPDAGFGDISKLLGKAYKEL 640
Query: 241 KESEKAVYQEKALKDKERYRIEME 264
++EK Y E A KDK RY+ EME
Sbjct: 641 SDAEKEPYDEMARKDKARYKREME 664
>gi|145341600|ref|XP_001415894.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576117|gb|ABO94186.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1402
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFP-STATNASFVLRKYYQSL 60
PI G +++LHR+F+E GG E++ + + WK V ST T+ASF +RKYY+
Sbjct: 1238 PIFCGAQMNLHRVFIEAMHLGGYEQVTRCKFWKVVARTLGRDLSTQTSASFAMRKYYEKC 1297
Query: 61 LRDYEQ 66
L E+
Sbjct: 1298 LFPLEK 1303
>gi|291228649|ref|XP_002734290.1| PREDICTED: dead ringer homolog 1-like [Saccoglossus kowalevskii]
Length = 266
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 38/54 (70%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLR 54
IPI+ + LDL+ LF V ++GG+ ++I ++ W+E+T + PS+ T+A+F LR
Sbjct: 211 IPIMAKQTLDLYELFKLVVSKGGLVEVINKKLWREITKGLSLPSSITSAAFTLR 264
>gi|225715078|gb|ACO13385.1| High mobility group protein B3 [Esox lucius]
Length = 204
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 188 KKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKA 246
K+ + ++DP PK SG+ F AEQ ++K HP ++++ +GE WN L +S K
Sbjct: 83 KRGKKAKKDPNAPKRPPSGFFVFCAEQRPKIKAQHPSFGIGDVAKKLGEAWNNLTDSSKQ 142
Query: 247 VYQEKALKDKERYRIEMEDYR 267
Y KA K KE+YR ++ DY+
Sbjct: 143 PYLAKANKLKEKYRKDVADYK 163
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 196 DPAHPKPNRSGYNFF---FAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKA 252
D PK S Y +F E+H + P P E S+ W + EK+ ++++A
Sbjct: 5 DARKPKGKMSAYAYFVQTCREEHKKKNPEIPVNFSEFSKKCAGRWKTMSPKEKSKFEDQA 64
Query: 253 LKDKERYRIEMEDY 266
+DK RY EM Y
Sbjct: 65 NQDKARYESEMTSY 78
>gi|401712700|gb|AFP99083.1| Dri, partial [Ophiocoma wendtii]
Length = 76
Score = 55.8 bits (133), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 38/57 (66%)
Query: 9 LDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLLRDYE 65
LDL+ LF VT +GG+ ++I +++W+E+T N P++ T+A+F LR Y L YE
Sbjct: 3 LDLYCLFNLVTDKGGLVEVINKKQWREITKGLNLPASITSAAFTLRTQYMKYLYPYE 59
>gi|356496334|ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
Length = 640
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ FF + LK +PG ++SR++GE W KL EK Y+ KA +
Sbjct: 552 DPNAPKRAMSGFMFFSKLERENLKKTNPGISFTDVSRVLGEKWKKLSVEEKEPYEAKARE 611
Query: 255 DKERYRIEMEDYR 267
DK+RY+ E+ Y+
Sbjct: 612 DKKRYKDEISGYK 624
>gi|324526583|gb|ADY48692.1| High mobility group protein 1.2, partial [Ascaris suum]
Length = 248
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 172 NATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHP-GKDREIS 230
A A G R+RK+ ++DP PK S + FF ++ ++ HP K +++
Sbjct: 112 QAEVAAYGGEDMLRKRKRV---KKDPNAPKRALSAFFFFSHDKRPEVQQQHPEWKVGQVA 168
Query: 231 RMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRE 268
+ +G W L + E+ VY+ KAL+DKERY EM +Y++
Sbjct: 169 QELGRYWKALSDEERMVYERKALEDKERYAEEMRNYKQ 206
>gi|313224463|emb|CBY20253.1| unnamed protein product [Oikopleura dioica]
Length = 671
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 200 PKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALKDKER 258
PK S Y FF E+ +K +PG K E+S++ GE W ++ ++KA Y+EKALKDKER
Sbjct: 552 PKRAMSAYFFFINEERENIKRDNPGIKVTEVSKIAGERWREINANDKAKYEEKALKDKER 611
Query: 259 YRIEMEDY 266
Y E ++
Sbjct: 612 YEREKAEF 619
>gi|790198|gb|AAC41606.1| high mobility group protein [Plasmodium falciparum]
Length = 97
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREIS---RMIGELWNKLKESEKAVYQEKA 252
DP PK + S Y FF E+ A + P ++++ +MIGE WNKL E EKA +++KA
Sbjct: 17 DPHAPKRSLSAYMFFAKEKRAEIISKQPELSKDVATVGKMIGEAWNKLGEKEKAPFEKKA 76
Query: 253 LKDKERYRIEMEDY 266
+DK RY E +Y
Sbjct: 77 QEDKLRYEKEKAEY 90
>gi|328724689|ref|XP_001946884.2| PREDICTED: hypothetical protein LOC100168299 [Acyrthosiphon pisum]
Length = 814
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ L+ V RGGI +I ++ W+E+ P + T+A+F LR Y
Sbjct: 338 LPIMAKRVLDLYTLYKLVVQRGGIVAVITKKLWQEIIRGLGLPPSITSAAFTLRTQYVKY 397
Query: 61 LRDYE 65
L YE
Sbjct: 398 LYAYE 402
>gi|119187239|ref|XP_001244226.1| hypothetical protein CIMG_03667 [Coccidioides immitis RS]
gi|303317166|ref|XP_003068585.1| Nonhistone chromosomal protein 6B, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108266|gb|EER26440.1| Nonhistone chromosomal protein 6B, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320038503|gb|EFW20438.1| nucleosome binding protein Nhp6a [Coccidioides posadasii str.
Silveira]
gi|392870942|gb|EAS32789.2| non-histone chromosomal protein 6 [Coccidioides immitis RS]
Length = 102
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 183 RRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLK 241
R+ + +++E K++DP PK S Y FF EQ ++ +PG ++ +++GE W L
Sbjct: 8 RQTKGRRAEKKKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALS 67
Query: 242 ESEKAVYQEKALKDKERYRIEMEDY 266
+ ++A Y+EKA DK+RY E +Y
Sbjct: 68 DKQRAPYEEKAAADKKRYEDEKANY 92
>gi|118344422|ref|NP_001072036.1| transcription factor protein [Ciona intestinalis]
gi|70570508|dbj|BAE06614.1| transcription factor protein [Ciona intestinalis]
Length = 447
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 83/187 (44%), Gaps = 21/187 (11%)
Query: 133 SGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATAHAVSGVQRRRRR----- 187
+ YL V+ ETLK P+ I + N N + RR R
Sbjct: 195 TAYLYFVSKYRETLKEAGEVVPKAKIITQACAEKWRNMNEEEKEPFLELSRRDRERWQKD 254
Query: 188 KKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD---REISRMIGELWNKLKESE 244
K E K RDP PK S Y F A+ + +PGK +EI++ GE WN L ++E
Sbjct: 255 KALEKKPRDPNRPKRPPSAYFLFLAD----FRKNYPGKSDPAKEITKKAGEAWNSLSDAE 310
Query: 245 KAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAIPLQQRLPGADVDMVEVDTKLDETG 304
K Y A + ++ ++E Y++ +K G +S A +Q +D D VE+ + E G
Sbjct: 311 KTPYYRSAQLVRAKWEQDLEAYKQSVKCG-TLSRASSIQ-----SDHDPVEM---VGEVG 361
Query: 305 GDSPQTP 311
D ++P
Sbjct: 362 LDEDESP 368
>gi|312075048|ref|XP_003140243.1| hypothetical protein LOAG_04658 [Loa loa]
Length = 388
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFP-STATNASFVLRKYYQS 59
+P + + +DLHRL++ V RGG E++ +E+ WK+V N S ++ A + LR++YQ
Sbjct: 315 VPQVSKQTVDLHRLYLAVMKRGGFEQVTREKTWKQVCTEANSEMSESSAAGYQLRRHYQK 374
Query: 60 LLRDYEQI 67
L E +
Sbjct: 375 YLLGLECL 382
>gi|452839855|gb|EME41794.1| hypothetical protein DOTSEDRAFT_74007 [Dothistroma septosporum
NZE10]
Length = 108
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEK 251
K++DP PK S Y FF EQ +++ +PG K E+ + +GE W L E +KA Y+ K
Sbjct: 23 KKKDPNMPKRGLSAYMFFANEQRDKVRDDNPGIKFGEVGKQLGEKWKGLSEKQKAPYEAK 82
Query: 252 ALKDKERYRIEMEDY 266
A DK+RY E Y
Sbjct: 83 AAADKKRYEEEKAAY 97
>gi|431920081|gb|ELK18129.1| High mobility group protein B3 [Pteropus alecto]
Length = 255
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 141 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAK 200
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 201 LKEKYEKDVADYKSKGK 217
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 66 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 125
Query: 262 EMEDY 266
EM+DY
Sbjct: 126 EMKDY 130
>gi|195107651|ref|XP_001998422.1| GI23637 [Drosophila mojavensis]
gi|193915016|gb|EDW13883.1| GI23637 [Drosophila mojavensis]
Length = 2604
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 49/160 (30%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
P I + LDL+RL++ V RGG ++ K + WK++ + +++A++ LRK+Y
Sbjct: 1024 CPTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIAGLLGI-GASSSAAYTLRKHYTKN 1082
Query: 61 LRDYEQIYFFR---------------------------------SQDSWQGPSTNAVSA- 86
L +E +F R SQDS+ P A +A
Sbjct: 1083 LLAFE-CHFDRGDIDPLPIIQQVEAGSKKKTTKAASVPSPGSSNSQDSFPAPPGGAPNAA 1141
Query: 87 -------------PGTAQPSPDIQSAVQQPRINAAVLPEA 113
P +A P PD +A Q PR + P+A
Sbjct: 1142 LDGYTGYSGAGAYPPSAGPQPDYAAAGQMPRPPSQSNPQA 1181
>gi|241702148|ref|XP_002402900.1| conserved hypothetical protein [Ixodes scapularis]
gi|215504908|gb|EEC14402.1| conserved hypothetical protein [Ixodes scapularis]
Length = 65
Score = 55.1 bits (131), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 38/54 (70%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLR 54
IPI+ + LDL+ L+ V +RGG+ ++I ++ W+E+T N PS+ T+A+F LR
Sbjct: 10 IPIMAKQVLDLYELYRLVVSRGGLVEVINKKIWREITKGLNLPSSITSAAFTLR 63
>gi|118343940|ref|NP_001071792.1| transcription factor protein [Ciona intestinalis]
gi|70570753|dbj|BAE06615.1| transcription factor protein [Ciona intestinalis]
Length = 310
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 83/187 (44%), Gaps = 21/187 (11%)
Query: 133 SGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATAHAVSGVQRRRRR----- 187
+ YL V+ ETLK P+ I + N N + RR R
Sbjct: 58 TAYLYFVSKYRETLKEAGEVVPKAKIITQACAEKWRNMNEEEKEPFLELSRRDRERWQKD 117
Query: 188 KKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD---REISRMIGELWNKLKESE 244
K E K RDP PK S Y F A+ + +PGK +EI++ GE WN L ++E
Sbjct: 118 KALEKKPRDPNRPKRPPSAYFLFLAD----FRKNYPGKSDPAKEITKKAGEAWNSLSDAE 173
Query: 245 KAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAIPLQQRLPGADVDMVEVDTKLDETG 304
K Y A + ++ ++E Y++ +K G +S A +Q +D D VE+ + E G
Sbjct: 174 KTPYYRSAQLVRAKWEQDLEAYKQSVKCG-TLSRASSIQ-----SDHDPVEM---VGEVG 224
Query: 305 GDSPQTP 311
D ++P
Sbjct: 225 LDEDESP 231
>gi|328723632|ref|XP_003247901.1| PREDICTED: protein dead ringer homolog, partial [Acyrthosiphon
pisum]
Length = 558
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ + LDL+ L+ V RGGI +I ++ W+E+ P + T+A+F LR Y
Sbjct: 266 LPIMAKRVLDLYTLYKLVVQRGGIVAVITKKLWQEIIRGLGLPPSITSAAFTLRTQYVKY 325
Query: 61 LRDYE 65
L YE
Sbjct: 326 LYAYE 330
>gi|225708606|gb|ACO10149.1| High mobility group protein B2 [Osmerus mordax]
Length = 216
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEK 251
+++DP PK S + F ++ AR+K HPG +I++ +GELW+K +K Y+ K
Sbjct: 89 RKKDPNAPKRPPSAFFVFCSDHRARIKGEHPGISIGDIAKKLGELWSKQTPKDKVPYEAK 148
Query: 252 ALKDKERYRIEMEDYRERLKTGQVISDAIPLQQRLPGADVDMVE 295
A K KE+Y ++ YR + G SDA ++ PG VE
Sbjct: 149 AGKLKEKYEKDVAAYRAKSGAGGGKSDA--GKKSGPGRPTKKVE 190
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 195 RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD---REISRMIGELWNKLKESEKAVYQEK 251
+DP P+ S Y FF K HPG E S+ E W + EK +++
Sbjct: 4 KDPNKPRGKTSSYAFFVQTCREEHKKKHPGTSVNFSEFSKKCSERWKTMSAKEKVKFEDL 63
Query: 252 ALKDKERYRIEMEDY 266
A DK R+ EM+ Y
Sbjct: 64 AKGDKVRFDREMKGY 78
>gi|121705796|ref|XP_001271161.1| nucleosome binding protein (Nhp6a), putative [Aspergillus clavatus
NRRL 1]
gi|119399307|gb|EAW09735.1| nucleosome binding protein (Nhp6a), putative [Aspergillus clavatus
NRRL 1]
Length = 104
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 184 RRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKE 242
R + K+ E K++DP PK S Y FF + +++ +PG ++ +M+GE W L +
Sbjct: 9 RTKTKRVERKKKDPNAPKRGLSAYMFFANDNRDKVREENPGISFGQVGKMLGERWKALSD 68
Query: 243 SEKAVYQEKALKDKERYRIEMEDY 266
SE+ Y+EKA DK+RY E Y
Sbjct: 69 SERRPYEEKAATDKKRYEDEKASY 92
>gi|198454716|ref|XP_002137933.1| GA26236, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198132922|gb|EDY68491.1| GA26236, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 2796
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
P I + LDL+RL++ V RGG ++ K + WK++ + +++A++ LRK+Y
Sbjct: 1049 CPTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIAGLLGI-GASSSAAYTLRKHYTKN 1107
Query: 61 LRDYEQIYFFR 71
L +E +F R
Sbjct: 1108 LLTFE-CHFDR 1117
>gi|390179239|ref|XP_003736840.1| GA26236, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859765|gb|EIM52913.1| GA26236, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 2636
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
P I + LDL+RL++ V RGG ++ K + WK++ + +++A++ LRK+Y
Sbjct: 1049 CPTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIAGLLGI-GASSSAAYTLRKHYTKN 1107
Query: 61 LRDYEQIYFFR 71
L +E +F R
Sbjct: 1108 LLTFE-CHFDR 1117
>gi|195396288|ref|XP_002056764.1| GJ24712 [Drosophila virilis]
gi|194143473|gb|EDW59876.1| GJ24712 [Drosophila virilis]
Length = 2587
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
P I + LDL+RL++ V RGG ++ K + WK++ + +++A++ LRK+Y
Sbjct: 1008 CPTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIAGLLGI-GASSSAAYTLRKHYTKN 1066
Query: 61 LRDYEQIYFFR 71
L +E +F R
Sbjct: 1067 LLAFE-CHFDR 1076
>gi|194764523|ref|XP_001964378.1| GF23141 [Drosophila ananassae]
gi|190614650|gb|EDV30174.1| GF23141 [Drosophila ananassae]
Length = 2667
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
P I + LDL+RL++ V RGG ++ K + WK++ + +++A++ LRK+Y
Sbjct: 1027 CPTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIAGLLGI-GASSSAAYTLRKHYTKN 1085
Query: 61 LRDYEQIYFFR 71
L +E +F R
Sbjct: 1086 LLTFE-CHFDR 1095
>gi|195497450|ref|XP_002096105.1| osa [Drosophila yakuba]
gi|194182206|gb|EDW95817.1| osa [Drosophila yakuba]
Length = 2686
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
P I + LDL+RL++ V RGG ++ K + WK++ + +++A++ LRK+Y
Sbjct: 1023 CPTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIAGLLGI-GASSSAAYTLRKHYTKN 1081
Query: 61 LRDYEQIYFFR 71
L +E +F R
Sbjct: 1082 LLTFE-CHFDR 1091
>gi|324499695|gb|ADY39876.1| Trithorax group protein osa [Ascaris suum]
Length = 1799
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFP-STATNASFVLRKYYQS 59
+P + + +DLHRL++ V RGG E++ +E+ WK V N S ++ A + LR++YQ
Sbjct: 434 VPQVSKQTVDLHRLYIAVMKRGGFEQVTREKTWKHVCTEANSEMSESSAAGYQLRRHYQK 493
Query: 60 LLRDYE 65
L E
Sbjct: 494 YLLGLE 499
>gi|212287990|gb|ACJ23470.1| LD42748p [Drosophila melanogaster]
Length = 2177
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
P I + LDL+RL++ V RGG ++ K + WK++ + +++A++ LRK+Y
Sbjct: 1024 CPTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIAGLLGI-GASSSAAYTLRKHYTKN 1082
Query: 61 LRDYEQIYFFR 71
L +E +F R
Sbjct: 1083 LLTFE-CHFDR 1092
>gi|195349033|ref|XP_002041051.1| GM15347 [Drosophila sechellia]
gi|194122656|gb|EDW44699.1| GM15347 [Drosophila sechellia]
Length = 2705
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
P I + LDL+RL++ V RGG ++ K + WK++ + +++A++ LRK+Y
Sbjct: 1026 CPTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIAGLLGI-GASSSAAYTLRKHYTKN 1084
Query: 61 LRDYEQIYFFR 71
L +E +F R
Sbjct: 1085 LLTFE-CHFDR 1094
>gi|2981221|gb|AAC06254.1| eyelid [Drosophila melanogaster]
Length = 2715
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
P I + LDL+RL++ V RGG ++ K + WK++ + +++A++ LRK+Y
Sbjct: 1023 CPTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIAGLLGI-GASSSAAYTLRKHYTKN 1081
Query: 61 LRDYEQIYFFR 71
L +E +F R
Sbjct: 1082 LLTFE-CHFDR 1091
>gi|24647755|ref|NP_732263.1| osa, isoform A [Drosophila melanogaster]
gi|7300295|gb|AAF55457.1| osa, isoform A [Drosophila melanogaster]
Length = 2703
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
P I + LDL+RL++ V RGG ++ K + WK++ + +++A++ LRK+Y
Sbjct: 1024 CPTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIAGLLGI-GASSSAAYTLRKHYTKN 1082
Query: 61 LRDYEQIYFFR 71
L +E +F R
Sbjct: 1083 LLTFE-CHFDR 1092
>gi|24647757|ref|NP_524392.2| osa, isoform B [Drosophila melanogaster]
gi|281361984|ref|NP_001163639.1| osa, isoform D [Drosophila melanogaster]
gi|33301341|sp|Q8IN94.1|OSA_DROME RecName: Full=Trithorax group protein osa; AltName: Full=Protein
eyelid
gi|23171573|gb|AAN13750.1| osa, isoform B [Drosophila melanogaster]
gi|272477030|gb|ACZ94935.1| osa, isoform D [Drosophila melanogaster]
Length = 2716
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
P I + LDL+RL++ V RGG ++ K + WK++ + +++A++ LRK+Y
Sbjct: 1024 CPTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIAGLLGI-GASSSAAYTLRKHYTKN 1082
Query: 61 LRDYEQIYFFR 71
L +E +F R
Sbjct: 1083 LLTFE-CHFDR 1092
>gi|239606992|gb|EEQ83979.1| nucleosome binding protein [Ajellomyces dermatitidis ER-3]
Length = 105
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 184 RRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKE 242
R+ + + E K++DP PK S Y FF EQ ++ +PG ++ +++GE W L E
Sbjct: 8 RKTKVRGEKKKKDPNAPKRGLSAYMFFANEQRDNVREENPGISFGQVGKVLGERWKALNE 67
Query: 243 SEKAVYQEKALKDKERYRIEMEDYRERLKT 272
++A Y+ KA DK+RY E Y R K
Sbjct: 68 KQRAPYEAKAAADKKRYEDEKASYNARRKA 97
>gi|194900366|ref|XP_001979728.1| GG16758 [Drosophila erecta]
gi|190651431|gb|EDV48686.1| GG16758 [Drosophila erecta]
Length = 2704
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
P I + LDL+RL++ V RGG ++ K + WK++ + +++A++ LRK+Y
Sbjct: 1027 CPTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIAGLLGI-GASSSAAYTLRKHYTKN 1085
Query: 61 LRDYEQIYFFR 71
L +E +F R
Sbjct: 1086 LLTFE-CHFDR 1095
>gi|351715334|gb|EHB18253.1| High mobility group protein B3, partial [Heterocephalus glaber]
Length = 151
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK G+ FF+E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 40 DPNAPKRPPPGFFLFFSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYITKAAK 99
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 100 LKEKYEKDVADYKSKGK 116
>gi|312281655|dbj|BAJ33693.1| unnamed protein product [Thellungiella halophila]
Length = 646
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ FF + +K HPG E+ +++G+ W ++ EK Y+ KA
Sbjct: 558 DPNAPKRAMSGFMFFSQMERDNIKKTHPGIAFGEVGKVLGDKWRQMSAEEKEPYEAKAQV 617
Query: 255 DKERYRIEMEDYR 267
DK+RY+ E+ DY+
Sbjct: 618 DKKRYKDEISDYK 630
>gi|302833429|ref|XP_002948278.1| hypothetical protein VOLCADRAFT_88462 [Volvox carteri f. nagariensis]
gi|300266498|gb|EFJ50685.1| hypothetical protein VOLCADRAFT_88462 [Volvox carteri f. nagariensis]
Length = 1459
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 8/73 (10%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNF-PSTATNAS-------FV 52
+P + GK+LDLH+LF+EV RGG E ++ +++W+E+ P A +AS
Sbjct: 1343 LPQLAGKDLDLHKLFLEVHLRGGYEAVVLKQQWQELCVNQGIHPQMAASASQPNTPAAAA 1402
Query: 53 LRKYYQSLLRDYE 65
LR +Y+ L D+E
Sbjct: 1403 LRAHYERCLLDFE 1415
>gi|442619660|ref|NP_001262680.1| osa, isoform E [Drosophila melanogaster]
gi|440217550|gb|AGB96060.1| osa, isoform E [Drosophila melanogaster]
Length = 2555
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
P I + LDL+RL++ V RGG ++ K + WK++ + +++A++ LRK+Y
Sbjct: 1023 CPTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIAGLLGI-GASSSAAYTLRKHYTKN 1081
Query: 61 LRDYEQIYFFR 71
L +E +F R
Sbjct: 1082 LLTFE-CHFDR 1091
>gi|45553399|ref|NP_996228.1| osa, isoform C [Drosophila melanogaster]
gi|45446521|gb|AAS65166.1| osa, isoform C [Drosophila melanogaster]
Length = 2556
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
P I + LDL+RL++ V RGG ++ K + WK++ + +++A++ LRK+Y
Sbjct: 1024 CPTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIAGLLGI-GASSSAAYTLRKHYTKN 1082
Query: 61 LRDYEQIYFFR 71
L +E +F R
Sbjct: 1083 LLTFE-CHFDR 1092
>gi|346986304|ref|NP_001069753.2| high mobility group protein B3 isoform 1 [Bos taurus]
Length = 274
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 163 DPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAK 222
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 223 LKEKYEKDVADYKSKGK 239
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 88 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 147
Query: 262 EMEDY 266
EM+DY
Sbjct: 148 EMKDY 152
>gi|426258242|ref|XP_004022724.1| PREDICTED: high mobility group protein B3 [Ovis aries]
Length = 248
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 160 DPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAK 219
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 220 LKEKYEKDVADYKSKGK 236
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 85 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 144
Query: 262 EMEDY 266
EM+DY
Sbjct: 145 EMKDY 149
>gi|301094892|ref|XP_002896549.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108943|gb|EEY66995.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 498
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 192 IKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQE 250
+ R DP P+ R+ Y+ + + + + HP K+ +I R IG W L + E+A+YQ
Sbjct: 286 LTRGDPRAPRLPRNSYSVYLSTKRQEMAAQHPNHKNSQIMREIGIAWKALSDVERALYQR 345
Query: 251 KALKDKERYRIEMEDY 266
KA +D ER+R EME +
Sbjct: 346 KAEEDVERFRAEMEAH 361
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKA 252
K+R P+ ++ YN + + L + E S + G LW ++ E E+ Y+ A
Sbjct: 397 KQRKVIPPRRPKTAYNLMYMSKRTELLATYQMSHNECSALCGRLWRQMPEEEREPYKRMA 456
Query: 253 LKDKERYRIEMEDY 266
+DK RY +E+E Y
Sbjct: 457 AEDKRRYEVELEIY 470
>gi|57112857|ref|XP_538194.1| PREDICTED: high mobility group protein B3 [Canis lupus familiaris]
gi|338729649|ref|XP_001505130.3| PREDICTED: high mobility group protein B3-like isoform 1 [Equus
caballus]
Length = 201
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|417396975|gb|JAA45521.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 200
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|301778413|ref|XP_002924621.1| PREDICTED: high mobility group protein B3-like [Ailuropoda
melanoleuca]
Length = 201
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|170596302|ref|XP_001902715.1| ARID/BRIGHT DNA binding domain containing protein [Brugia malayi]
gi|158589445|gb|EDP28436.1| ARID/BRIGHT DNA binding domain containing protein [Brugia malayi]
Length = 429
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFP-STATNASFVLRKYYQS 59
+P + + +DLHRL++ V RGG E++ +++ WK+V N S ++ A + LR++YQ
Sbjct: 323 VPQVSKQTVDLHRLYLAVMKRGGFEQVTRDKTWKQVCTEANSEMSESSAAGYQLRRHYQK 382
Query: 60 LLRDYEQI 67
L E +
Sbjct: 383 YLLGLECL 390
>gi|281338637|gb|EFB14221.1| hypothetical protein PANDA_014002 [Ailuropoda melanoleuca]
Length = 168
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|395545985|ref|XP_003774876.1| PREDICTED: high mobility group protein B3-like [Sarcophilus
harrisii]
Length = 201
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|149410917|ref|XP_001509199.1| PREDICTED: high mobility group protein B3-like isoform 1
[Ornithorhynchus anatinus]
gi|345306624|ref|XP_003428488.1| PREDICTED: high mobility group protein B3-like isoform 2
[Ornithorhynchus anatinus]
Length = 201
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|298714276|emb|CBJ27392.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 313
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 174 TAHAVSGVQRRRRRKKSE---IKRRDPAHPKPNRSGYNFFFAEQHARL----KPLHPGKD 226
+ H S RR KK+ KR+DP P+ S +NFF ++ + + + PG +
Sbjct: 205 SGHTRSSEARRMVPKKTSPPRRKRKDPNRPRGYVSAFNFFVKDKRSAYVRDAQGVSPGNN 264
Query: 227 REISRMIGELWNKLKESEKAVYQEKALKDKERY 259
E+++M+G+ W +L EK YQ ++ DK RY
Sbjct: 265 NEVNKMLGQAWKELTTEEKNCYQARSDVDKCRY 297
>gi|410989557|ref|XP_004001438.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B3
[Felis catus]
Length = 201
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|340372397|ref|XP_003384730.1| PREDICTED: hypothetical protein LOC100641625 [Amphimedon
queenslandica]
Length = 495
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +G K L+L+ LF T GG +++ R+W V + +T T AS V RK+Y+ L
Sbjct: 416 IPRLGSKYLNLYSLFHSTTRMGGYDQVTVNRKWSSVFDSMGYSTTMTCASTVTRKHYEKL 475
Query: 61 LRDYEQ 66
L +E+
Sbjct: 476 LLPFEK 481
>gi|440910877|gb|ELR60625.1| High mobility group protein B3 [Bos grunniens mutus]
Length = 236
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 125 DPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAK 184
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 185 LKEKYEKDVADYKSKGK 201
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 50 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 109
Query: 262 EMEDY 266
EM+DY
Sbjct: 110 EMKDY 114
>gi|20150982|pdb|1KQQ|A Chain A, Solution Structure Of The Dead Ringer Arid-Dna Complex
Length = 139
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ LDL+ L+ V ARGG+ +I ++ W+E+ + PS+ T+A+ LR Y
Sbjct: 46 LPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAALTLRTQYMKY 105
Query: 61 LRDYE 65
L YE
Sbjct: 106 LYPYE 110
>gi|355705241|gb|EHH31166.1| hypothetical protein EGK_21042 [Macaca mulatta]
Length = 200
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E +LK +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKLKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|255074117|ref|XP_002500733.1| hypothetical protein MICPUN_57400 [Micromonas sp. RCC299]
gi|226515996|gb|ACO61991.1| hypothetical protein MICPUN_57400 [Micromonas sp. RCC299]
Length = 646
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK S Y F E+ + + +PG E+++ +G W + EK+V++ KA K
Sbjct: 567 DPNAPKKPLSAYIIFTKERRSAVVAENPGLSLTEVTKELGARWKAIGAEEKSVFEAKAKK 626
Query: 255 DKERYRIEMEDY 266
DKERY +EME Y
Sbjct: 627 DKERYAVEMEAY 638
>gi|397581915|gb|EJK52096.1| hypothetical protein THAOC_28671, partial [Thalassiosira oceanica]
Length = 1318
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 197 PAHPKPNRSGYNFFFAEQHARLKPLHP-GKDREISRMIGELWNKLKESEKAVYQEKALKD 255
P P R+ ++++ + ++ +P K EI ++G+ W +L + KA YQE+A D
Sbjct: 1183 PNAPTGVRTAFSYYTKAKREEVRASNPEAKAGEILSLLGKHWKELGKEAKAPYQEQAAAD 1242
Query: 256 KERYRIEMEDYRERLKT 272
KERYR EM DY ++ T
Sbjct: 1243 KERYRKEMADYNAKIGT 1259
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 228 EISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRER 269
EI+ ++G W +L + +A YQE+A DKER+ E +Y R
Sbjct: 365 EINALLGRHWKELGKEARAPYQEQARADKERHGRETAEYEAR 406
>gi|119491564|ref|XP_001263303.1| nucleosome binding protein (Nhp6a), putative [Neosartorya fischeri
NRRL 181]
gi|119411463|gb|EAW21406.1| nucleosome binding protein (Nhp6a), putative [Neosartorya fischeri
NRRL 181]
Length = 104
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 184 RRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKE 242
R + K+ E K++DP PK S Y FF E +++ +PG ++ +M+GE W L +
Sbjct: 9 RTKTKRVERKKKDPNAPKRGLSAYMFFANENRDKVREENPGISFGQVGKMLGERWKALSD 68
Query: 243 SEKAVYQEKALKDKERYRIEMEDY 266
+++ Y+EKA DK+RY E Y
Sbjct: 69 TDRRPYEEKAAADKKRYEDEKASY 92
>gi|212526742|ref|XP_002143528.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
gi|212526744|ref|XP_002143529.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
gi|210072926|gb|EEA27013.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
gi|210072927|gb|EEA27014.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
Length = 103
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 183 RRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLK 241
R+ +R E +++DP PK S Y FF E R++ +PG + R +GELW L
Sbjct: 8 RKAKRGGVEKRKKDPNAPKRGLSAYMFFANENRERVRDENPGIAFGALGRKLGELWKGLS 67
Query: 242 ESEKAVYQEKALKDKERYRIEMEDY 266
+SE+ Y++KA DK+RY + Y
Sbjct: 68 DSERKPYEDKAAADKKRYEDQKATY 92
>gi|81673590|gb|AAI09794.1| High-mobility group box 3 [Bos taurus]
gi|296471156|tpg|DAA13271.1| TPA: high mobility group protein B3 isoform 1 [Bos taurus]
Length = 236
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 125 DPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAK 184
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 185 LKEKYEKDVADYKSKGK 201
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 50 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 109
Query: 262 EMEDY 266
EM+DY
Sbjct: 110 EMKDY 114
>gi|340721281|ref|XP_003399052.1| PREDICTED: hypothetical protein LOC100651892 [Bombus terrestris]
Length = 2066
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
P I LDL RL++ V RGG ++ K + WK++ + +++A++ LRK+Y
Sbjct: 881 CPTISKNPLDLFRLYLYVKERGGFMEVTKNKTWKDIAGLLGI-GASSSAAYTLRKHYTKH 939
Query: 61 LRDYEQIYFFR 71
L YE +F R
Sbjct: 940 LLAYE-CHFDR 949
>gi|449019442|dbj|BAM82844.1| hypothetical protein CYME_CMS239C [Cyanidioschyzon merolae strain
10D]
Length = 544
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEV-TAIFNFPSTATNASFVLRKYYQS 59
P+ GK LDL+ L+ V ARGGI+ +I +RW E+ + N+ +T+ SF LR Q
Sbjct: 367 TPMFRGKLLDLYALYWGVKARGGIDAVIASKRWPEIWRTMRNYYRESTDHSFRLRVASQQ 426
Query: 60 LLRDYEQIY 68
L D+ + Y
Sbjct: 427 YLADFLRQY 435
>gi|449459450|ref|XP_004147459.1| PREDICTED: FACT complex subunit SSRP1-like [Cucumis sativus]
Length = 642
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ FF + +K +PG E+ R++G+ WNK+ EK Y+ KA
Sbjct: 554 DPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSAEEKEPYESKARD 613
Query: 255 DKERYRIEMEDYR 267
DK+RY+ E+ Y+
Sbjct: 614 DKKRYKEEISGYK 626
>gi|350406792|ref|XP_003487883.1| PREDICTED: hypothetical protein LOC100748451 [Bombus impatiens]
Length = 2066
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
P I LDL RL++ V RGG ++ K + WK++ + +++A++ LRK+Y
Sbjct: 881 CPTISKNPLDLFRLYLYVKERGGFMEVTKNKTWKDIAGLLGI-GASSSAAYTLRKHYTKH 939
Query: 61 LRDYEQIYFFR 71
L YE +F R
Sbjct: 940 LLAYE-CHFDR 949
>gi|290998589|ref|XP_002681863.1| hypothetical protein NAEGRDRAFT_82958 [Naegleria gruberi]
gi|284095488|gb|EFC49119.1| hypothetical protein NAEGRDRAFT_82958 [Naegleria gruberi]
Length = 219
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 189 KSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR---EISRMIGELWNKLKESEK 245
K K++DP PK ++GY F F ++H G+ + E+S+++GE+WN L + +K
Sbjct: 4 KKSTKKKDPNAPKKPKTGY-FLFCDEHREAAKAKTGEKKSASEVSKVLGEMWNSLSDEQK 62
Query: 246 AVYQEKALKDKERYRIEMEDYRE 268
Y +K K + Y +ME+Y++
Sbjct: 63 KPYNDKYKKSLDGYNAQMEEYKK 85
>gi|221053558|ref|XP_002258153.1| high mobility group protein (HMG protein) [Plasmodium knowlesi
strain H]
gi|193807986|emb|CAQ38690.1| high mobility group protein (HMG protein),putative [Plasmodium
knowlesi strain H]
Length = 99
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 182 QRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR---EISRMIGELWN 238
Q++ RK+++ K++DP PK S Y F+ ++ L P R ++ +++GE W
Sbjct: 6 QKKVLRKQNKRKKKDPLAPKRALSAYMFYVKDKRLELIKEKPELARNVAQVGKLVGEAWG 65
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYRE 268
KL ++K Y++KA DK RY E+E+YR+
Sbjct: 66 KLSAAQKTPYEKKAQLDKVRYSKEIEEYRK 95
>gi|290560936|ref|NP_001166812.1| high mobility group box 3 [Rattus norvegicus]
gi|392354295|ref|XP_003751731.1| PREDICTED: high mobility group protein B3-like isoform 2 [Rattus
norvegicus]
gi|149027076|gb|EDL82825.1| rCG56793 [Rattus norvegicus]
gi|165971283|gb|AAI58740.1| Hmgb3 protein [Rattus norvegicus]
Length = 200
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYMTKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|328787106|ref|XP_395512.4| PREDICTED: hypothetical protein LOC412046 [Apis mellifera]
Length = 2066
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
P I LDL RL++ V RGG ++ K + WK++ + +++A++ LRK+Y
Sbjct: 881 CPTISKNPLDLFRLYLYVKERGGFMEVTKNKTWKDIAGLLGI-GASSSAAYTLRKHYTKH 939
Query: 61 LRDYEQIYFFR 71
L YE +F R
Sbjct: 940 LLAYE-CHFDR 949
>gi|383849904|ref|XP_003700574.1| PREDICTED: uncharacterized protein LOC100883763 [Megachile
rotundata]
Length = 2067
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
P I LDL RL++ V RGG ++ K + WK++ + +++A++ LRK+Y
Sbjct: 880 CPTISKNPLDLFRLYLYVKERGGFMEVTKNKTWKDIAGLLGI-GASSSAAYTLRKHYTKH 938
Query: 61 LRDYEQIYFFR 71
L YE +F R
Sbjct: 939 LLAYE-CHFDR 948
>gi|392354293|ref|XP_003751730.1| PREDICTED: high mobility group protein B3-like isoform 1 [Rattus
norvegicus]
Length = 241
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 130 DPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYMTKAAK 189
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 190 LKEKYEKDVADYKSKGK 206
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 55 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYDR 114
Query: 262 EMEDY 266
EM+DY
Sbjct: 115 EMKDY 119
>gi|149410669|ref|XP_001505909.1| PREDICTED: high mobility group protein 20A [Ornithorhynchus
anatinus]
Length = 347
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 14/166 (8%)
Query: 116 ASSGGSPVIGVIDGKFESGYLVTVTIG--SETLKGVLYQAPQYP-----IHQVPSSYNVI 168
ASS P+ DG ES + T + G Q+ P + QVP N
Sbjct: 6 ASSTLPPLFADDDGSKESSDMATTGLSHPEAPYSGGASQSSNNPDFVEDLTQVPLLQNES 65
Query: 169 NNNNATAHAVSGVQRRRRR------KKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLH 222
+N ++ ++R +R +K + RD PK +GY F E+ +L+
Sbjct: 66 SNTAESSEQRHEEEQRNKRGGWSKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKR 125
Query: 223 PGKDR-EISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYR 267
P EI+RM+G W+KL EK Y ++A +DKERY E+E Y+
Sbjct: 126 PEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|402594685|gb|EJW88611.1| arid/bright DNA binding domain-containing protein [Wuchereria
bancrofti]
Length = 452
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFP-STATNASFVLRKYYQS 59
+P + + +DLHRL++ V RGG E++ +++ WK+V N S ++ A + LR++YQ
Sbjct: 335 VPQVSKQTVDLHRLYLAVMKRGGFEQVTRDKTWKQVCTEANSEMSESSAAGYQLRRHYQK 394
Query: 60 LLRDYEQI 67
L E +
Sbjct: 395 YLLGLECL 402
>gi|261194046|ref|XP_002623428.1| nucleosome binding protein [Ajellomyces dermatitidis SLH14081]
gi|239588442|gb|EEQ71085.1| nucleosome binding protein [Ajellomyces dermatitidis SLH14081]
gi|327354542|gb|EGE83399.1| nonhistone chromosomal protein 6A [Ajellomyces dermatitidis ATCC
18188]
Length = 101
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 184 RRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKE 242
R+ + + E K++DP PK S Y FF EQ ++ +PG ++ +++GE W L E
Sbjct: 8 RKTKVRGEKKKKDPNAPKRGLSAYMFFANEQRDNVREENPGISFGQVGKVLGERWKALNE 67
Query: 243 SEKAVYQEKALKDKERYRIEMEDY 266
++A Y+ KA DK+RY E Y
Sbjct: 68 KQRAPYEAKAAADKKRYEDEKASY 91
>gi|383855680|ref|XP_003703338.1| PREDICTED: uncharacterized protein LOC100876726 [Megachile
rotundata]
Length = 1829
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLL 61
P + GK++DL+ L+V VTA GG ++ W + F+ P N+ L++ Y L
Sbjct: 38 PKVNGKDIDLYLLYVVVTAHGGWIRVNSRNEWTLLCEQFHLPKGCVNSGVGLKQIYLRYL 97
Query: 62 RDYEQIYFF 70
YE+++F
Sbjct: 98 DRYEKVHFL 106
>gi|283462216|gb|ADB22402.1| dorsal switch-like hmg protein [Saccoglossus kowalevskii]
Length = 241
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD---REISRMIGELWNKLKESEKAVYQ 249
K+ +P PK S Y FF K HP + E S+ E W K+ + EK V+
Sbjct: 29 KKGNPDKPKGRMSAYAFFVQSCRQEHKKQHPAESVVFAEFSKKCAERWKKMTDKEKKVFH 88
Query: 250 EKALKDKERYRIEMEDY 266
+ A KDKERY EME Y
Sbjct: 89 DMADKDKERYNTEMEKY 105
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWNKLKESEKAVYQEKALK 254
DP PK N S + F + A +K +HP ++++ +GE W + ++KA Y+++A K
Sbjct: 121 DPDAPKRNLSPFFLFCNVKRAEVKKVHPNWGVGDVAKALGEQWKNVSAADKAKYEKEAAK 180
Query: 255 DKERYRIEMEDY 266
+K RY +ME Y
Sbjct: 181 EKIRYEKDMEAY 192
>gi|307185456|gb|EFN71456.1| Protein dead ringer [Camponotus floridanus]
Length = 359
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 9 LDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLLRDYEQ 66
LDL+ L+ V RGG+ ++I ++ W+E+ P++ T+A+F LR Y L YEQ
Sbjct: 6 LDLYELYKLVVTRGGLVEVINKKLWQEIIKGLRLPASITSAAFTLRTQYMKYLYPYEQ 63
>gi|253756810|gb|ACT35162.1| HmgB3y, partial [Monodelphis domestica]
Length = 193
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L ++EK Y KA K
Sbjct: 86 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYNNKAAK 145
Query: 255 DKERYRIEMEDYRERLKTGQVISDAIPLQQRL 286
KE+Y ++ DY+ + K V A ++++
Sbjct: 146 LKEKYEKDVADYKSKGKFDSVKGTAKASRKKV 177
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 196 DPAHPKPNRSGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKA 252
DP PK S Y FF E+H + P P E S+ E W + EK+ + E A
Sbjct: 2 DPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKNMSGKEKSKFDEMA 61
Query: 253 LKDKERYRIEMEDY 266
DK RY EM+DY
Sbjct: 62 KADKLRYDREMKDY 75
>gi|303271093|ref|XP_003054908.1| ARID/BRIGHT DNA binding domain protein [Micromonas pusilla CCMP1545]
gi|226462882|gb|EEH60160.1| ARID/BRIGHT DNA binding domain protein [Micromonas pusilla CCMP1545]
Length = 1667
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTA-TNASFVLRKYYQSL 60
PI ELDL+R+ VEV GG + + +E+RWK+V T T+ASF +R +Q
Sbjct: 1476 PIFCHAELDLYRVLVEVMCLGGSDLVTEEKRWKQVARTLGKDLTKQTSASFAMRSNFQKA 1535
Query: 61 LRDYEQIYF 69
L D E +
Sbjct: 1536 LVDVEAWLW 1544
>gi|75218951|sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein 1
gi|2104679|emb|CAA66480.1| transcription factor [Vicia faba var. minor]
Length = 642
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ FF + LK +PG ++ R++GE W L EK Y+ KA
Sbjct: 554 DPNAPKRALSGFMFFSQMERENLKKTNPGISFTDVGRVLGEKWKNLSAEEKEPYEAKAQA 613
Query: 255 DKERYRIEMEDYR 267
DK+RY+ E+ Y+
Sbjct: 614 DKKRYKDEISGYK 626
>gi|224004088|ref|XP_002295695.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585727|gb|ACI64412.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 883
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 184 RRRRKKSEIKRRDP-AHPKPNRSGYNFFFAEQHARLKPLHPGKDRE-----------ISR 231
+ +R KR D A PK S YNFFF EQ ++ D E I R
Sbjct: 7 KAKRANKGGKRSDLLAKPKRPMSAYNFFFREQRGKILSEASTGDEEGGDGSMTSFEEIGR 66
Query: 232 MIGELWNKLKESEKAVYQEKALKDKERYRIEMEDY 266
+IG+ W ++E + A Y+E A +D ERYR EM+ +
Sbjct: 67 IIGQRWRSIEEDDLAKYKEMAKQDSERYRDEMKTF 101
>gi|427784387|gb|JAA57645.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2002
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLL 61
P I G+E+DL L+ VTA GG +K+ +W V NFP NAS LR+ Y L
Sbjct: 37 PRINGREVDLFALYNSVTAIGGWQKVNDLLKWDYVLDKLNFPKACANASLALRQVYVRYL 96
Query: 62 RDYEQIYFFRSQDSWQGPSTNAVSAPGT 89
+E+++F G + + PGT
Sbjct: 97 SLFEKVHFL-------GEDADEEADPGT 117
>gi|349802605|gb|AEQ16775.1| putative high mobility group box 3 [Pipa carvalhoi]
Length = 149
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L E EK Y KA K
Sbjct: 64 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNEGEKQPYNNKAAK 123
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 124 LKEKYEKDVADYKSKGK 140
>gi|221220328|gb|ACM08825.1| High mobility group protein B3 [Salmo salar]
Length = 203
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 195 RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKAL 253
+DP PK SG+ F AEQ ++K HP ++++ +GE+WN L +S K Y KA
Sbjct: 90 KDPNAPKRPPSGFFVFCAEQRPKIKAQHPNFGIGDVAKKLGEMWNNLTDSNKQPYLAKAN 149
Query: 254 KDKERYRIEMEDY 266
K KE+Y+ ++ DY
Sbjct: 150 KLKEKYQKDVADY 162
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 196 DPAHPKPNRSGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKA 252
D PK S Y +F E+H P P E S+ W + EK+ ++++A
Sbjct: 5 DARKPKGKMSAYAYFVQTCREEHKNKNPEIPVNFSEFSKKCSGRWKTMSPKEKSKFEDQA 64
Query: 253 LKDKERYRIEMEDY 266
+DK RY +EM Y
Sbjct: 65 KQDKARYDLEMTSY 78
>gi|221220618|gb|ACM08970.1| High mobility group protein B3 [Salmo salar]
gi|223646914|gb|ACN10215.1| High mobility group protein B3 [Salmo salar]
gi|223672777|gb|ACN12570.1| High mobility group protein B3 [Salmo salar]
Length = 201
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 195 RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKAL 253
+DP PK SG+ F AEQ ++K HP ++++ +GE+WN L +S K Y KA
Sbjct: 90 KDPNAPKRPPSGFFVFCAEQRPKIKAQHPNFGIGDVAKKLGEMWNNLTDSNKQPYLAKAN 149
Query: 254 KDKERYRIEMEDY 266
K KE+Y+ ++ DY
Sbjct: 150 KLKEKYQKDVADY 162
>gi|221219912|gb|ACM08617.1| High mobility group protein B3 [Salmo salar]
Length = 201
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 195 RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKAL 253
+DP PK SG+ F AEQ ++K HP ++++ +GE+WN L +S K Y KA
Sbjct: 90 KDPNAPKRPPSGFFVFCAEQRPKIKAQHPNFGIGDVAKKLGEMWNNLTDSNKQPYLAKAN 149
Query: 254 KDKERYRIEMEDY 266
K KE+Y+ ++ DY
Sbjct: 150 KLKEKYQKDVADY 162
>gi|2285963|emb|CAA71143.1| high mobility group protein 2a [Homo sapiens]
Length = 200
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTVSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|71027705|ref|XP_763496.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350449|gb|EAN31213.1| high mobility group protein, putative [Theileria parva]
Length = 94
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 188 KKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREIS---RMIGELWNKLKESE 244
KKS+ ++DP PK S Y FF E+ A L +P R+++ +++G WN L ESE
Sbjct: 11 KKSKRAKKDPNAPKRALSSYMFFAKEKRAELVRENPDLARDVAAVGKLVGAAWNSLDESE 70
Query: 245 KAVYQEKALKDKERYRIEMEDY 266
KA Y++ A D+ RY E Y
Sbjct: 71 KAPYEKLAEADRARYEKEKAAY 92
>gi|403305854|ref|XP_003943467.1| PREDICTED: high mobility group protein B3 [Saimiri boliviensis
boliviensis]
Length = 202
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
>gi|170784871|ref|NP_001116308.1| wu:fk52f12 [Danio rerio]
Length = 213
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEK 251
K++DP PK SG+ F +E ++K +P ++++ +GE+WN L ++ K + K
Sbjct: 85 KKKDPNAPKRPPSGFFLFCSEHRPQIKAQYPSLGIGDVAKKLGEMWNGLTDANKQPFLMK 144
Query: 252 ALKDKERYRIEMEDYRERLKTGQV-ISDAIPLQQRLP 287
A K K++Y+ ++ DY+ + K G V + +P+ +P
Sbjct: 145 ANKLKDKYQKDVADYKTKSKAGGVSMGMGMPMANCMP 181
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 196 DPAHPKPNRSGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKA 252
DP PK S Y +F E+H + P P E S+ W + + EK+ +++ A
Sbjct: 5 DPRKPKGKMSAYAYFVQTCREEHKKKSPEIPVSFSEFSKRCSGRWKAMTDKEKSRFEDMA 64
Query: 253 LKDKERYRIEMEDY 266
+DK RY EM Y
Sbjct: 65 KQDKVRYDQEMMHY 78
>gi|452988900|gb|EME88655.1| hypothetical protein MYCFIDRAFT_57980 [Pseudocercospora fijiensis
CIRAD86]
Length = 108
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 197 PAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALKD 255
P PK S Y FF EQ +++ +PG K E+ +M+GE W L E +KA Y+ KA D
Sbjct: 27 PNMPKRGLSAYMFFANEQRDKVRDENPGIKFGEVGKMLGEKWKALGEKQKAPYEAKAAAD 86
Query: 256 KERYRIEMEDY 266
K+RY E Y
Sbjct: 87 KKRYEEEKAAY 97
>gi|158286486|ref|XP_308780.4| AGAP006990-PB [Anopheles gambiae str. PEST]
gi|157020491|gb|EAA04740.4| AGAP006990-PB [Anopheles gambiae str. PEST]
Length = 1724
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P I GK++DLH+L+ V RGG K+ W EV + P+ N L++ Y
Sbjct: 99 LPKISGKDVDLHKLYSIVIGRGGWMKVNAREDWDEVIEELDLPTRCVNNEIALKQIYIRY 158
Query: 61 LRDYEQIYF 69
L YE++ F
Sbjct: 159 LDRYERVNF 167
>gi|19114226|ref|NP_593314.1| High-mobility group non-histone chromatin protein (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74627097|sp|P87057.1|NHP6_SCHPO RecName: Full=Non-histone chromosomal protein 6
gi|2058376|emb|CAB08172.1| High-mobility group non-histone chromatin protein (predicted)
[Schizosaccharomyces pombe]
Length = 108
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEK 251
+++DP PK N S + FF E ++K +P ++ ++G+ W +L +E+ Y+EK
Sbjct: 9 RKKDPNTPKRNMSAFMFFSIENREKMKTDNPDATFGQLGSLLGKRWKELTSTEREPYEEK 68
Query: 252 ALKDKERYRIEMEDYRERLKTGQ 274
A +DKERY E ++Y +L G+
Sbjct: 69 ARQDKERYERERKEYDTKLANGE 91
>gi|158286484|ref|XP_001688081.1| AGAP006990-PA [Anopheles gambiae str. PEST]
gi|157020490|gb|EDO64730.1| AGAP006990-PA [Anopheles gambiae str. PEST]
Length = 2108
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P I GK++DLH+L+ V RGG K+ W EV + P+ N L++ Y
Sbjct: 99 LPKISGKDVDLHKLYSIVIGRGGWMKVNAREDWDEVIEELDLPTRCVNNEIALKQIYIRY 158
Query: 61 LRDYEQIYF 69
L YE++ F
Sbjct: 159 LDRYERVNF 167
>gi|395754558|ref|XP_002832281.2| PREDICTED: high mobility group protein B3 isoform 2 [Pongo abelii]
Length = 199
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|384489718|gb|EIE80940.1| hypothetical protein RO3G_05645 [Rhizopus delemar RA 99-880]
Length = 176
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 186 RRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESE 244
++KK E +DP PK N S Y + ++ HP K EI++++GE+WNKL E E
Sbjct: 44 KKKKVE---KDPNAPKRNLSSYMLYSQAVRPKVAAEHPDMKAIEIAKLVGEMWNKLSEKE 100
Query: 245 KAVYQEKALKDKERYRIEMEDYRERL 270
KA Y ++A K+K R+ E Y+ L
Sbjct: 101 KAPYIKQAEKEKIRFEKENASYKTTL 126
>gi|85000895|ref|XP_955166.1| high-mobility-group (HMG) protein [Theileria annulata strain
Ankara]
gi|65303312|emb|CAI75690.1| high-mobility-group (HMG) protein, putative [Theileria annulata]
Length = 94
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 188 KKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREIS---RMIGELWNKLKESE 244
KKS+ ++DP PK S Y FF E+ A L +P R+++ +++G WN L ESE
Sbjct: 11 KKSKRAKKDPNAPKRALSSYMFFAKEKRAELVRDNPDLARDVAAVGKLVGAAWNSLDESE 70
Query: 245 KAVYQEKALKDKERYRIEMEDY 266
KA Y++ A D+ RY E Y
Sbjct: 71 KAPYEKLAEADRARYEKEKAAY 92
>gi|224002190|ref|XP_002290767.1| structure specific recognition protein 1 [Thalassiosira pseudonana
CCMP1335]
gi|220974189|gb|EED92519.1| structure specific recognition protein 1 [Thalassiosira pseudonana
CCMP1335]
Length = 765
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK S +NFF + + +K +P E+++++G + L SEKA Y+E A
Sbjct: 537 DPNAPKRGLSAFNFFTSAKRGDIKAANPDASFAELAKLVGAEFKGLSASEKAKYEELAAN 596
Query: 255 DKERYRIEMEDY 266
DK+RY EME Y
Sbjct: 597 DKKRYEKEMESY 608
>gi|224008000|ref|XP_002292959.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971085|gb|EED89420.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 105
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 181 VQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNK 239
V+ RR KK K++DP PK R + FF E ++ PG K E+ ++GE W
Sbjct: 17 VEDRRINKKYLKKQKDPEQPKRARGSFVFFTFEHRPKVMEEFPGIKFVEMGSILGERWRS 76
Query: 240 LKESEKAVYQEKALKDKERYRIEMEDY 266
L EK Y+++A +DK R+ EME Y
Sbjct: 77 LPAEEKQKYEDQAQEDKLRFNAEMEKY 103
>gi|320168039|gb|EFW44938.1| hypothetical protein CAOG_02944 [Capsaspora owczarzaki ATCC 30864]
Length = 193
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 185 RRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKES 243
R KK E +DP PK + + +F R+K +PG K +I+ ++G+LW +L E+
Sbjct: 3 RGNKKDE---KDPNKPKKPTTAFMYFSNAMRERVKTQNPGLKMTDIASVLGKLWGQLPEA 59
Query: 244 EKAVYQEKALKDKERYRIEMEDYRERLKTG 273
+K YQ A DKERY M+ Y + TG
Sbjct: 60 DKDKYQTMANSDKERYAKAMDGYVAPVSTG 89
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 189 KSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWNKLKESEKAV 247
KS K +DP PK S Y F L+ +P IS IGELW +L + K
Sbjct: 91 KSGKKSKDPNAPKRPPSAYICFANAVRPELRKTYPSDTMPAISTKIGELWRQLTDDNKEP 150
Query: 248 YQEKALKDKERYRIEMEDYR 267
Y ++A K +++ EM Y+
Sbjct: 151 YNKQAEALKLKFQTEMAAYK 170
>gi|156401428|ref|XP_001639293.1| predicted protein [Nematostella vectensis]
gi|156226420|gb|EDO47230.1| predicted protein [Nematostella vectensis]
Length = 265
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 184 RRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWNKLKE 242
+RRRK RD PK +GY F EQ +++ HP E+++++G W+K+ +
Sbjct: 9 KRRRKTL----RDTNAPKAPLTGYVQFLNEQREKVRSEHPELPFPEVTKILGAEWSKMSQ 64
Query: 243 SEKAVYQEKALKDKERYRIEMEDYRE 268
+K Y + A +DKERY IE+E+Y++
Sbjct: 65 DDKQRYLDDAERDKERYIIELENYQK 90
>gi|311277128|ref|XP_003135516.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
Length = 202
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|350588033|ref|XP_003482539.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
gi|350588037|ref|XP_003482541.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
Length = 196
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y+FF E+H + P P E S+ E W EK+ + E A DK RY
Sbjct: 14 SAYDFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKPTSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|291410190|ref|XP_002721383.1| PREDICTED: high-mobility group box 3 [Oryctolagus cuniculus]
Length = 215
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 104 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYITKAAK 163
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 164 LKEKYEKDVADYKSKGK 180
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 29 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 88
Query: 262 EMEDY 266
EM+DY
Sbjct: 89 EMKDY 93
>gi|410256408|gb|JAA16171.1| high mobility group box 3 [Pan troglodytes]
Length = 213
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP+ PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPSAPKRPPSGFFLFSSEIRPKIKSTNPGISVGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|312382281|gb|EFR27793.1| hypothetical protein AND_05096 [Anopheles darlingi]
Length = 1468
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P I G+E+DLH+L+ V +RGG K+ W EV P N L++ Y
Sbjct: 114 LPKISGREVDLHKLYSVVISRGGWMKVNAREDWDEVIEELELPMRCVNNEIALKQIYIRF 173
Query: 61 LRDYEQIYF 69
L YE++ F
Sbjct: 174 LDRYERVNF 182
>gi|432953329|ref|XP_004085352.1| PREDICTED: high mobility group protein B2-like isoform 1 [Oryzias
latipes]
Length = 200
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEK 251
KR+DP PK S + F +E +K +PG + ++ +GE+W+KL +SEK Y+EK
Sbjct: 90 KRKDPNAPKRPPSAFFVFCSEYRPSVKQQYPGLSIGDCAKKLGEMWSKLSQSEKQPYEEK 149
Query: 252 ALKDKERYRIEMEDYR 267
A K +E+Y +M YR
Sbjct: 150 AQKLREKYDRDMVAYR 165
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 192 IKRRDPAHPKPNRSGYNFF---FAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVY 248
+ R+D PK S Y FF E+H + P E S+ E W L S+K +
Sbjct: 1 MMRKDVNKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSPSDKKCF 60
Query: 249 QEKALKDKERYRIEMEDY 266
++ A DK RY EM DY
Sbjct: 61 EDMAKADKVRYNREMCDY 78
>gi|410219302|gb|JAA06870.1| high mobility group box 3 [Pan troglodytes]
Length = 199
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|348551110|ref|XP_003461373.1| PREDICTED: high mobility group protein B3-like [Cavia porcellus]
Length = 202
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYITKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|354495940|ref|XP_003510086.1| PREDICTED: high mobility group protein B3-like [Cricetulus griseus]
gi|344249016|gb|EGW05120.1| High mobility group protein B3 [Cricetulus griseus]
Length = 200
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYITKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|296236643|ref|XP_002763412.1| PREDICTED: high mobility group protein B3-like [Callithrix jacchus]
Length = 203
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|167773205|gb|ABZ92037.1| high-mobility group box 3 [synthetic construct]
Length = 198
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|109132602|ref|XP_001091672.1| PREDICTED: high mobility group protein B3-like isoform 3 [Macaca
mulatta]
gi|109132606|ref|XP_001091441.1| PREDICTED: high mobility group protein B3-like isoform 1 [Macaca
mulatta]
gi|402911729|ref|XP_003918461.1| PREDICTED: high mobility group protein B3 isoform 1 [Papio anubis]
gi|402911731|ref|XP_003918462.1| PREDICTED: high mobility group protein B3 isoform 2 [Papio anubis]
Length = 201
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|71143137|ref|NP_005333.2| high mobility group protein B3 [Homo sapiens]
gi|426397735|ref|XP_004065062.1| PREDICTED: high mobility group protein B3 isoform 1 [Gorilla
gorilla gorilla]
gi|426397739|ref|XP_004065064.1| PREDICTED: high mobility group protein B3 isoform 3 [Gorilla
gorilla gorilla]
gi|85701353|sp|O15347.4|HMGB3_HUMAN RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|47124341|gb|AAH70482.1| HMGB3 protein [Homo sapiens]
gi|117645316|emb|CAL38124.1| hypothetical protein [synthetic construct]
gi|117646384|emb|CAL38659.1| hypothetical protein [synthetic construct]
gi|119619803|gb|EAW99397.1| high-mobility group box 3, isoform CRA_a [Homo sapiens]
gi|410351655|gb|JAA42431.1| high mobility group box 3 [Pan troglodytes]
gi|410351657|gb|JAA42432.1| high mobility group box 3 [Pan troglodytes]
Length = 200
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|296317265|ref|NP_001171733.1| dorsal switch-like hmg protein [Saccoglossus kowalevskii]
Length = 215
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD---REISRMIGELWNKLKESEKAVYQ 249
K+ +P PK S Y FF K HP + E S+ E W K+ + EK V+
Sbjct: 3 KKGNPDKPKGRMSAYAFFVQSCRQEHKKQHPAESVVFAEFSKKCAERWKKMTDKEKKVFH 62
Query: 250 EKALKDKERYRIEMEDY 266
+ A KDKERY EME Y
Sbjct: 63 DMADKDKERYNTEMEKY 79
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK N S + F + A +K +HP ++++ +GE W + ++KA Y+++A K
Sbjct: 95 DPDAPKRNLSPFFLFCNVKRAEVKKVHPNWGVGDVAKALGEQWKNVSAADKAKYEKEAAK 154
Query: 255 DKERYRIEMEDY 266
+K RY +ME Y
Sbjct: 155 EKIRYEKDMEAY 166
>gi|164450473|ref|NP_001106728.1| high mobility group protein B3 isoform 2 [Bos taurus]
gi|146324910|sp|Q32L31.2|HMGB3_BOVIN RecName: Full=High mobility group protein B3
gi|296471157|tpg|DAA13272.1| TPA: high mobility group protein B3 isoform 2 [Bos taurus]
gi|399227521|gb|AFP36466.1| HMGB3 transcript variant 1/2 [Bos taurus]
gi|399227522|gb|AFP36467.1| HMGB3 transcript variant 3 [Bos taurus]
Length = 200
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|443921694|gb|ELU41257.1| HMG (high mobility group) box domain-containing protein
[Rhizoctonia solani AG-1 IA]
Length = 703
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 187 RKKSEIKRRDPAH-PKPNRSGYNFFFAEQHARLKPLHPGK----DREISRMIGELWNKLK 241
+K S K+R H P+P + F H L PGK R IS++IGE+WNKL
Sbjct: 109 KKPSHSKKRPAGHIPRPRNA---FILFRSHHVAAQLIPGKVENDHRHISKIIGEIWNKLS 165
Query: 242 ESEKAVYQEKALKDKERYRIEMEDYRER 269
+E+ ++++KA +KER+ + YR +
Sbjct: 166 PAERLIWEQKADIEKERHSRKYPGYRYK 193
>gi|392877702|gb|AFM87683.1| high mobility group box 3 [Callorhinchus milii]
Length = 203
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 189 KSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAV 247
K K++DP PK SG+ F ++ ++K PG ++++ +GELWN + EK
Sbjct: 82 KGSKKKKDPNAPKRPPSGFFLFCSDHRPKIKAGSPGLTIGDVAKKLGELWNGCTDEEKKP 141
Query: 248 YQEKALKDKERYRIEMEDYRERLK 271
Y KA K KE+Y ++ DYR + K
Sbjct: 142 YNAKAAKLKEKYEKDVADYRTKGK 165
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 192 IKRRDPAHPKPNRSGYNFF---FAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVY 248
+ +RDP P+ S Y +F E+H + P P + S+ E W + EK+ +
Sbjct: 1 MAKRDPKKPRGKMSSYAYFVQTCREEHKKKNPDVPVNFSDFSKRCSERWKTMSGKEKSKF 60
Query: 249 QEKALKDKERYRIEMEDY 266
++ A DK RY EM+ Y
Sbjct: 61 EDLAKVDKVRYDREMKTY 78
>gi|242781691|ref|XP_002479852.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|242781695|ref|XP_002479853.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|242781700|ref|XP_002479854.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|218719999|gb|EED19418.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|218720000|gb|EED19419.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|218720001|gb|EED19420.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
Length = 103
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 190 SEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVY 248
SE +++DP PK S Y FF E R++ +PG + R +GELW L ++E+ Y
Sbjct: 15 SEKRKKDPNAPKRGLSAYMFFANENRERVRDENPGIAFGALGRKLGELWKGLSDAERKPY 74
Query: 249 QEKALKDKERYRIEMEDY 266
++KA DK+RY + Y
Sbjct: 75 EDKAAADKKRYEDQKASY 92
>gi|225452706|ref|XP_002282538.1| PREDICTED: FACT complex subunit SSRP1 [Vitis vinifera]
gi|296082859|emb|CBI22160.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ FF + +K PG E+ R++G+ W K+ EK Y+ KA
Sbjct: 555 DPNAPKRAMSGFMFFSQTERENIKKSTPGIAFTEVGRVLGDKWKKMTAEEKEPYEAKAQA 614
Query: 255 DKERYRIEMEDYR 267
DK+RYR E+ Y+
Sbjct: 615 DKKRYRDEISGYK 627
>gi|359062996|ref|XP_003585778.1| PREDICTED: high mobility group protein B3-like, partial [Bos
taurus]
Length = 186
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y+FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYSFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEIAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|348518429|ref|XP_003446734.1| PREDICTED: AT-rich interactive domain-containing protein 1B-like
[Oreochromis niloticus]
Length = 2215
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL RL++ V GG+ + K ++W+E++++ N T+++++ L+K Y
Sbjct: 1050 LPAVGKKPLDLCRLYLAVRDIGGLAMVNKNKKWRELSSLLNV-GTSSSSASSLKKQYIQY 1108
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQP 103
L YE R ++ P A G A+ P +Q+ +Q P
Sbjct: 1109 LFAYE-CKMERGEE----PPPEAAGPAGDAKKPPSLQAKIQPP 1146
>gi|344299188|ref|XP_003421269.1| PREDICTED: high mobility group protein B3-like [Loxodonta africana]
Length = 200
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L ++EK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYNNKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|147866286|emb|CAN79926.1| hypothetical protein VITISV_042446 [Vitis vinifera]
Length = 644
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ FF + +K PG E+ R++G+ W K+ EK Y+ KA
Sbjct: 555 DPNAPKRAMSGFMFFSQTERENIKKSTPGIAFTEVGRVLGDKWKKMTAEEKEPYEAKAQA 614
Query: 255 DKERYRIEMEDYR 267
DK+RYR E+ Y+
Sbjct: 615 DKKRYRDEISGYK 627
>gi|254826706|ref|NP_001157151.1| high mobility group protein B3 [Monodelphis domestica]
gi|253756818|gb|ACT35166.1| HmgB3x [Monodelphis domestica]
Length = 201
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L ++EK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYNNKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|432942120|ref|XP_004082969.1| PREDICTED: AT-rich interactive domain-containing protein 2-like
[Oryzias latipes]
Length = 1520
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 26 KIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLLRDYEQIYFFRSQDSWQGPSTNAVS 85
++ + +W E+ FNFP + +NA+F LR+YY L YE+++ F D P S
Sbjct: 4 QVSDKNQWVELAEDFNFPRSCSNAAFALRQYYLRYLEKYEKVHHFGEDDEEAQPGNPKTS 63
Query: 86 APGTAQPS 93
P A PS
Sbjct: 64 LPVGATPS 71
>gi|358255365|dbj|GAA57072.1| high mobility group protein B1, partial [Clonorchis sinensis]
Length = 778
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 177 AVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD---REISRMI 233
AVS + R R+ +D + PK + Y F HA K HP + S+
Sbjct: 525 AVSALIRISVRRLLHTMAKDKSKPKGALTPYALFLQSMHADQKKKHPSVTLDFKTFSKEC 584
Query: 234 GELWNKLKESEKAVYQEKALKDKERYRIEMEDY 266
E W L EK +++ A KDKERYR EM+ Y
Sbjct: 585 SEQWKNLTAKEKKKFEDLAAKDKERYRKEMQSY 617
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 189 KSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHP-GKDREISRMIGELWNKLKESEKAV 247
KS +++DP PK S + F ++ ++K HP K EI++ +G+ W K K
Sbjct: 625 KSRKRKKDPNAPKKALSAFFLFCNDERPKVKADHPDWKVSEIAKELGKRWETCKNKSK-- 682
Query: 248 YQEKALKDKERY 259
Y+ +A +K+RY
Sbjct: 683 YESQAQVEKQRY 694
>gi|300120230|emb|CBK19784.2| unnamed protein product [Blastocystis hominis]
Length = 169
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKII-KERRWKEVT-AIFNFPSTATNASFVLRKYYQS 59
P++G +E+DL+RLF EVTA GG + +I KE W + + N+ T T+AS+ L+K
Sbjct: 106 PMLGKREVDLYRLFREVTAHGGCDNVIKKEGTWSRIYRGMDNYSPTETSASYRLKKMCVL 165
Query: 60 LLR 62
LLR
Sbjct: 166 LLR 168
>gi|148235321|ref|NP_001089163.1| high mobility group box 3 [Xenopus laevis]
gi|55824420|gb|AAV66347.1| high mobility group B3b protein [Xenopus laevis]
gi|114108280|gb|AAI23148.1| LOC734200 protein [Xenopus laevis]
Length = 201
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 195 RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKAL 253
+DP PK SG+ F +E ++K +PG +I++ +GE+WN L + EK Y KA
Sbjct: 88 KDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDIAKKLGEMWNNLSDGEKQPYNNKAA 147
Query: 254 KDKERYRIEMEDYRERLK 271
K KE+Y ++ DY+ + K
Sbjct: 148 KLKEKYEKDVADYKSKGK 165
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 192 IKRRDPAHPKPNRSGYNFF---FAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVY 248
+ +RDP PK S Y +F E+H + P P E S+ E W + EK+ +
Sbjct: 1 MAKRDPKKPKGKMSAYAYFVQTCREEHKKKNPEIPVNFAEFSKKCSERWRSMSGKEKSKF 60
Query: 249 QEKALKDKERYRIEMEDY 266
++ A DK RY EM+D+
Sbjct: 61 EDLAKADKVRYDREMKDF 78
>gi|355694844|gb|AER99804.1| high-mobility group box 3 [Mustela putorius furo]
Length = 197
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L + EK Y KA K
Sbjct: 91 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAK 150
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 151 LKEKYEKDVADYKSKGK 167
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 16 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 75
Query: 262 EMEDY 266
EM+DY
Sbjct: 76 EMKDY 80
>gi|395857208|ref|XP_003800997.1| PREDICTED: high mobility group protein B3-like [Otolemur garnettii]
Length = 225
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISVGDVAKKLGEMWNNLSDSEKQPYITKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKAMSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|410256410|gb|JAA16172.1| high mobility group box 3 [Pan troglodytes]
Length = 213
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|237845111|ref|XP_002371853.1| high mobility group protein [Toxoplasma gondii ME49]
gi|211969517|gb|EEB04713.1| high mobility group protein [Toxoplasma gondii ME49]
gi|221480801|gb|EEE19228.1| high mobility group protein, putative [Toxoplasma gondii GT1]
gi|221501467|gb|EEE27242.1| high mobility group protein, putative [Toxoplasma gondii VEG]
Length = 302
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 11/131 (8%)
Query: 142 GSETLKGVLYQAPQYPIHQVPSS-YNVINNNNATAHAVSGVQRRRRRKKSEIKRRDPAHP 200
GS GV Y HQ + Y N N A + V++ + +K DP P
Sbjct: 176 GSAARSGVNTIEEHYGKHQAAACCYPWWNRLNTMAPKKTIVKKTKAKK-------DPNAP 228
Query: 201 KPNRSGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKE 257
K S + FF E+ R P K E+ +M+GE W KL +++K Y+ KA+ DK
Sbjct: 229 KRPLSAFIFFSKDKREEIIRKNPELKSKLAEVGKMVGEAWGKLSDAQKKPYESKAVADKA 288
Query: 258 RYRIEMEDYRE 268
RY EM Y++
Sbjct: 289 RYEREMIAYKK 299
>gi|440794082|gb|ELR15253.1| ARID/BRIGHT DNA binding domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 998
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNF--PSTATNASFVLRKYYQ 58
IP + GKELDL++LF V RGG +KI ++R+W EV S T + +L Y
Sbjct: 129 IPRLDGKELDLYKLFKIVVERGGAKKIQRKRKWIEVVEALKLSRSSKPTALAQLLAHQYN 188
Query: 59 SLLRDYEQIY 68
L DYE+ Y
Sbjct: 189 LWLSDYEEHY 198
>gi|350397805|ref|XP_003484997.1| PREDICTED: high mobility group protein 20A-like [Bombus impatiens]
Length = 328
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 167 VINNNNATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD 226
V NN A+A A + R KK + RD PK +GY F ++ +++ +P
Sbjct: 50 VKKNNTASAVASNTTNTTNRAKKRKKIPRDATAPKQPLTGYFRFLNDRREKVRTENPTLS 109
Query: 227 -REISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRE----RLKTGQVISDAIP 281
EI++++ W+ L +K Y + A +DKERY E DY++ RL + + S+
Sbjct: 110 FAEITKLLASEWSTLPADQKQQYLDAAEQDKERYNREFSDYKQTEAYRLFSEKQSSEKQE 169
Query: 282 LQQRLPGADVDMVEVDTKLDE----TGGDSP 308
++ G DV+ + D + D+ TG D P
Sbjct: 170 NKKERNGTDVNSEQNDIQQDKDNDFTGFDIP 200
>gi|255074119|ref|XP_002500734.1| high-mobility protein [Micromonas sp. RCC299]
gi|226515997|gb|ACO61992.1| high-mobility protein [Micromonas sp. RCC299]
Length = 153
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK S Y F E+ + + +PG E+++ +G W + EK+V++ KA K
Sbjct: 74 DPNAPKKPLSAYIIFTKERRSAVVAENPGLSLTEVTKELGARWKAIGAEEKSVFEAKAKK 133
Query: 255 DKERYRIEMEDY 266
DKERY +EME Y
Sbjct: 134 DKERYAVEMEAY 145
>gi|348543650|ref|XP_003459296.1| PREDICTED: high mobility group protein B2-like isoform 1
[Oreochromis niloticus]
Length = 200
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEK 251
KR+DP PK S + F +E +K +PG + ++ +GE+W+KL +SEK Y+EK
Sbjct: 90 KRKDPNAPKRPPSAFFVFCSEYRPSVKQQYPGLSIGDCAKKLGEMWSKLSQSEKQPYEEK 149
Query: 252 ALKDKERYRIEMEDYR 267
A K +E+Y +M YR
Sbjct: 150 AQKLREKYDRDMVAYR 165
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 192 IKRRDPAHPKPNRSGYNFF---FAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVY 248
+ R+D PK S Y FF E+H + P E S+ E W L S+K +
Sbjct: 1 MMRKDINKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSPSDKKCF 60
Query: 249 QEKALKDKERYRIEMEDY 266
++ A DK RY EM+DY
Sbjct: 61 EDMAKADKVRYNREMKDY 78
>gi|444730168|gb|ELW70558.1| High mobility group protein B3 [Tupaia chinensis]
Length = 369
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +G++WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPLSGFFLFSSEFRPKIKSTNPGISIGDVAKKLGDMWNNLSDSEKQPYITKAAK 148
Query: 255 DKERYRIEMEDYRERLKT 272
KE+Y ++ +Y+ + K+
Sbjct: 149 LKEKYEKDVANYKSKGKS 166
>gi|427781061|gb|JAA55982.1| Putative transcription factor a mitochondrial [Rhipicephalus
pulchellus]
Length = 153
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 149 VLYQAPQYPIHQVPSSYNVINNNNATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYN 208
++ Q QY ++ SS N I AT + RR+ ++ E K R P P RS Y
Sbjct: 1 MVQQEKQY--NEYLSSLN-IEEIMATGQKAKHLHLRRKSRRLEAKVRQLKKPGPPRSAYA 57
Query: 209 FFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDY 266
FF E AR P K E ++++ E W L ESEK VYQ +A +DK RY +M D+
Sbjct: 58 FFCIE--AR----QPNQKVTEEAKVLAEKWKALPESEKQVYQRRAEEDKRRYNDDMIDW 110
>gi|154284354|ref|XP_001542972.1| nucleosome binding protein [Ajellomyces capsulatus NAm1]
gi|150406613|gb|EDN02154.1| nucleosome binding protein [Ajellomyces capsulatus NAm1]
gi|240273630|gb|EER37150.1| nucleosome binding protein [Ajellomyces capsulatus H143]
gi|325087527|gb|EGC40837.1| nucleosome binding protein [Ajellomyces capsulatus H88]
Length = 102
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 191 EIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQ 249
E K++DP PK S Y FF EQ ++ +PG ++ +++GE W L E ++A Y+
Sbjct: 16 EKKKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKVLGERWKALNEKQRAPYE 75
Query: 250 EKALKDKERYRIEMEDY 266
KA DK+RY E Y
Sbjct: 76 AKAAADKKRYEDEKASY 92
>gi|341882042|gb|EGT37977.1| hypothetical protein CAEBREN_07938 [Caenorhabditis brenneri]
Length = 1779
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTA--TNASFVLRKYYQ 58
+P + + +DLHRL++ V A+GG +++ KE+ WK + N P A + A + LRK+YQ
Sbjct: 362 VPQVSKQSIDLHRLYIGVRAKGGFQQVTKEKYWKNLCTEAN-PDLAESSAAGYQLRKHYQ 420
Query: 59 SLL 61
L
Sbjct: 421 KHL 423
>gi|148694630|gb|EDL26577.1| mCG10155, isoform CRA_d [Mus musculus]
Length = 220
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L ++EK Y KA K
Sbjct: 109 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAK 168
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 169 LKEKYEKDVADYKSKGK 185
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 34 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYDR 93
Query: 262 EMEDY 266
EM+DY
Sbjct: 94 EMKDY 98
>gi|387914026|gb|AFK10622.1| high mobility group box 3 [Callorhinchus milii]
Length = 210
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 189 KSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAV 247
K K++DP PK SG+ F ++ ++K PG ++++ +GELWN + EK
Sbjct: 89 KGSKKKKDPNAPKRPPSGFFLFCSDHRPKIKAGSPGLTIGDVAKKLGELWNGCTDEEKKP 148
Query: 248 YQEKALKDKERYRIEMEDYR 267
Y KA K KE+Y ++ DYR
Sbjct: 149 YNAKAAKLKEKYEKDVADYR 168
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 190 SEIKRRDPAHPKPNRSGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKA 246
+++ +RDP P+ S Y +F E+H + P P + S+ E W + EK+
Sbjct: 6 TKMAKRDPKKPRGKMSSYAYFVQTCREEHKKKNPDVPVNFSDFSKRCSERWKTMSGKEKS 65
Query: 247 VYQEKALKDKERYRIEMEDY 266
+++ A DK RY EM+ Y
Sbjct: 66 KFEDLAKVDKVRYDREMKTY 85
>gi|224098124|ref|XP_002198052.1| PREDICTED: high mobility group protein B3 isoform 1 [Taeniopygia
guttata]
gi|326924638|ref|XP_003208532.1| PREDICTED: high mobility group protein B3-like [Meleagris
gallopavo]
gi|449498655|ref|XP_004177286.1| PREDICTED: high mobility group protein B3 isoform 2 [Taeniopygia
guttata]
Length = 202
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L + EK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EKA + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|547652|sp|P36194.2|HMGB1_CHICK RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|391636|dbj|BAA03260.1| HMG-1 [Gallus gallus]
Length = 201
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L + EK Y KA K
Sbjct: 88 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAK 147
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 148 LKEKYEKDVADYKSKGK 164
Score = 37.7 bits (86), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EKA + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKK-NPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYDR 72
Query: 262 EMEDY 266
EM+DY
Sbjct: 73 EMKDY 77
>gi|397466921|ref|XP_003805186.1| PREDICTED: high mobility group protein B3 [Pan paniscus]
gi|410057106|ref|XP_001135676.3| PREDICTED: high mobility group protein B3 isoform 1 [Pan
troglodytes]
gi|426397737|ref|XP_004065063.1| PREDICTED: high mobility group protein B3 isoform 2 [Gorilla
gorilla gorilla]
gi|119619804|gb|EAW99398.1| high-mobility group box 3, isoform CRA_b [Homo sapiens]
Length = 220
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 109 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 168
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 169 LKEKYEKDVADYKSKGK 185
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 34 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 93
Query: 262 EMEDY 266
EM+DY
Sbjct: 94 EMKDY 98
>gi|342874398|gb|EGU76412.1| hypothetical protein FOXB_13090 [Fusarium oxysporum Fo5176]
Length = 102
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 183 RRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLK 241
+R + +K++ ++DP PK S Y FF EQ ++ +PG ++ +++GE W L
Sbjct: 8 KRGKAEKTKRGKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALN 67
Query: 242 ESEKAVYQEKALKDKERYRIEMEDY 266
E ++A Y+ KA DK+RY E + Y
Sbjct: 68 EKQRAPYEAKAAADKKRYEDEKQAY 92
>gi|449269345|gb|EMC80131.1| High mobility group protein B3 [Columba livia]
Length = 202
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L + EK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EKA + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEIPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|410930542|ref|XP_003978657.1| PREDICTED: high mobility group protein B2-like [Takifugu rubripes]
Length = 201
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEK 251
KR+DP PK S + F +E +K +PG + ++ +GE+W+KL +SEK Y+EK
Sbjct: 90 KRKDPNAPKRPPSAFFVFCSEYRPSVKQQYPGLSIGDCAKKLGEMWSKLTQSEKQPYEEK 149
Query: 252 ALKDKERYRIEMEDYR 267
A K +E+Y +M YR
Sbjct: 150 AQKLREKYDRDMVAYR 165
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 192 IKRRDPAHPKPNRSGYNFF---FAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVY 248
+ R+D PK S Y FF E+H + P E S+ E W L S+K +
Sbjct: 1 MMRKDVNKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKGLSASDKKCF 60
Query: 249 QEKALKDKERYRIEMEDY 266
++ A DK RY EM DY
Sbjct: 61 EDMAKADKVRYNREMRDY 78
>gi|449683907|ref|XP_002160081.2| PREDICTED: uncharacterized protein LOC100198143, partial [Hydra
magnipapillata]
Length = 760
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 206 GYNFFFAEQHARLKPLHPGKDR-EISRMIGELWNKLKESEKAVYQEKALKDKERYRIEME 264
Y FF E +K HP E+S+M+ +LW L E +K VY +K KDK Y +++
Sbjct: 501 AYQLFFREVQTGIKKDHPELGFGEVSKMVAQLWEALSEDKKNVYHDKYNKDKNEYSEKLK 560
Query: 265 DYRERL-KTGQVISDAIPL 282
Y+E + K G + ++P+
Sbjct: 561 QYKELIAKEGTTTTTSLPV 579
>gi|52345682|ref|NP_001004888.1| high mobility group box 3 [Xenopus (Silurana) tropicalis]
gi|49522962|gb|AAH75290.1| MGC88931 protein [Xenopus (Silurana) tropicalis]
gi|89267024|emb|CAJ81774.1| high-mobility group box 3 [Xenopus (Silurana) tropicalis]
Length = 202
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L + EK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDGEKQPYNNKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
>gi|449509245|ref|XP_004163534.1| PREDICTED: FACT complex subunit SSRP1-like, partial [Cucumis
sativus]
Length = 303
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ FF + +K +PG E+ R++G+ WNK+ EK Y+ KA
Sbjct: 215 DPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSAEEKEPYESKARD 274
Query: 255 DKERYRIEMEDYR 267
DK+RY+ E+ Y+
Sbjct: 275 DKKRYKEEISGYK 287
>gi|148229870|ref|NP_001080585.1| high mobility group box 3 [Xenopus laevis]
gi|27882654|gb|AAH44009.1| Hmgb3-prov protein [Xenopus laevis]
Length = 202
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y K K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGITIGDVAKKLGEMWNNLSDSEKQPYNNKGAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
>gi|225556517|gb|EEH04805.1| non-histone chromosomal protein 6 [Ajellomyces capsulatus G186AR]
Length = 102
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 191 EIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQ 249
E K++DP PK S Y FF EQ ++ +PG ++ +++GE W L E ++A Y+
Sbjct: 16 EKKKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKVLGERWKALNEKQRAPYE 75
Query: 250 EKALKDKERYRIEMEDY 266
KA DK+RY E Y
Sbjct: 76 AKAAADKKRYEDEKASY 92
>gi|295671102|ref|XP_002796098.1| nucleosome binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284231|gb|EEH39797.1| nucleosome binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 103
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 183 RRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLK 241
R+ + + E K++DP PK S Y FF EQ ++ +PG ++ +++GE W L
Sbjct: 9 RKSKTRGVEKKKKDPNAPKRGLSAYMFFANEQRDNVREENPGISFGQVGKVLGERWKALN 68
Query: 242 ESEKAVYQEKALKDKERYRIEMEDY 266
E ++A Y+ KA DK+RY E Y
Sbjct: 69 EKQRAPYEAKAAADKKRYEDEKASY 93
>gi|225681708|gb|EEH19992.1| nucleosome binding protein [Paracoccidioides brasiliensis Pb03]
Length = 103
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 183 RRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLK 241
R+ + + E K++DP PK S Y FF EQ ++ +PG ++ +++GE W L
Sbjct: 9 RKSKSRGVEKKKKDPNAPKRGLSAYMFFANEQRDNVREENPGISFGQVGKVLGERWKALN 68
Query: 242 ESEKAVYQEKALKDKERYRIEMEDY 266
E ++A Y+ KA DK+RY E Y
Sbjct: 69 EKQRAPYEAKAAADKKRYEDEKASY 93
>gi|156383950|ref|XP_001633095.1| predicted protein [Nematostella vectensis]
gi|156220160|gb|EDO41032.1| predicted protein [Nematostella vectensis]
Length = 258
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 8/127 (6%)
Query: 185 RRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKES 243
R+RKK+ +D PK +GY F E +++ +P E++R++G +W++L
Sbjct: 3 RKRKKA---HKDVNAPKAPLTGYVRFLNEHREKVRSENPDLPFHEVTRILGNMWSQLPTP 59
Query: 244 EKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAIPLQQRLPGADVDMVEVDTKLDET 303
+K ++ E+A KDKERY E+E+Y +R T ++ I Q+ L + +D+
Sbjct: 60 QKQLFLEEAEKDKERYMKELEEY-QRTDTYKMF---IAKQKALKKGRAQISLNSFAMDDD 115
Query: 304 GGDSPQT 310
GD QT
Sbjct: 116 DGDVAQT 122
>gi|56384901|gb|AAV85889.1| high mobility group 1 protein [Pelodiscus sinensis]
Length = 202
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L + EK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|255083290|ref|XP_002504631.1| histone demethylase [Micromonas sp. RCC299]
gi|226519899|gb|ACO65889.1| histone demethylase [Micromonas sp. RCC299]
Length = 827
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTA-TNASFVLRKYYQS 59
+P LDL ++ EV ARGG + + RRWKEV A T T+A F +R+ Y+
Sbjct: 104 VPKFCRHPLDLGHVYREVVARGGYKAVCDNRRWKEVCATLGHDLTGQTSAGFQMRQNYER 163
Query: 60 LLRDYE 65
L +YE
Sbjct: 164 CLLEYE 169
>gi|407926962|gb|EKG19868.1| High mobility group HMG1/HMG2 [Macrophomina phaseolina MS6]
Length = 106
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEK 251
K++DP PK S Y FF + +++ +PG K E+ +++GE W L E ++A Y+ K
Sbjct: 20 KKKDPNAPKRGLSAYMFFANDMRDKVREENPGIKFGEVGKILGERWKALSEKQRAPYEAK 79
Query: 252 ALKDKERYRIEMEDY 266
A DK+RY E Y
Sbjct: 80 AANDKKRYEDEKAAY 94
>gi|2565048|gb|AAB91435.1| CAGF9, partial [Homo sapiens]
Length = 331
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEK 251
K++DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 3 KKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRK 62
Query: 252 ALKDKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 63 TEAAKKEYLKALAAYRASL 81
>gi|453083241|gb|EMF11287.1| HMG_box-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 109
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEK 251
+++DP PK S Y FF + +++ +PG K E+ +++GE W L E +KA Y+ K
Sbjct: 23 RKKDPNMPKRGLSAYMFFANDTRDKVREDNPGIKFGEVGKLLGERWKALNEKQKAPYEAK 82
Query: 252 ALKDKERYRIEMEDY 266
A DK+RY E Y
Sbjct: 83 AAADKKRYEEEKAAY 97
>gi|170584352|ref|XP_001896965.1| ARID/BRIGHT DNA binding domain containing protein [Brugia malayi]
gi|158595654|gb|EDP34193.1| ARID/BRIGHT DNA binding domain containing protein [Brugia malayi]
Length = 158
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFP-STATNASFVLRKYYQS 59
+P + + +DLHRL++ V RGG E++ +++ WK+V N S ++ A + LR++YQ
Sbjct: 49 VPQVSKQTVDLHRLYLAVMKRGGFEQVTRDKTWKQVCTEANSEMSESSAAGYQLRRHYQK 108
Query: 60 LL 61
L
Sbjct: 109 YL 110
>gi|353233399|emb|CCD80754.1| unnamed protein product [Schistosoma mansoni]
Length = 271
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P + GK + L LFV V +RGG +++ R W EV PS NAS LR+ Y
Sbjct: 25 LPRLLGKPIKLSDLFVAVVSRGGYKRVCDRRWWLEVARELKLPSECANASVGLRRIYYQF 84
Query: 61 LRDYE 65
L +E
Sbjct: 85 LSHFE 89
>gi|241095084|ref|XP_002409472.1| high mobility group protein, putative [Ixodes scapularis]
gi|215492748|gb|EEC02389.1| high mobility group protein, putative [Ixodes scapularis]
Length = 447
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 162 PSSYNVINNNNATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPL 221
PS ++NN A V G ++ R + +RDP P+ S Y FF + A +K
Sbjct: 179 PSPEPLLNNGAA----VPGKAAKKARMPKKKGKRDPNEPQKPVSAYALFFRDTQAAIKGQ 234
Query: 222 HPGKD-REISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYR 267
+P E+S+++ +W+ L+ K VY+ + K+ Y + +YR
Sbjct: 235 NPNASFGEVSKIVASMWDGLEADHKDVYKRRTEAAKKEYLKMLAEYR 281
>gi|384496847|gb|EIE87338.1| hypothetical protein RO3G_12049 [Rhizopus delemar RA 99-880]
Length = 157
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALK 254
DP PK N S Y + ++ HP K EI++ +GE+WNKL E EK Y ++A K
Sbjct: 42 DPNAPKRNLSSYMLYTQAVRPKVVAEHPDMKAIEIAKFVGEMWNKLSEKEKMPYVKQAQK 101
Query: 255 DKERYRIEMEDYRERLKTGQ 274
+K R+ E Y++ L + +
Sbjct: 102 EKVRFEKENASYKDSLVSAE 121
>gi|260820323|ref|XP_002605484.1| hypothetical protein BRAFLDRAFT_126796 [Branchiostoma floridae]
gi|229290818|gb|EEN61494.1| hypothetical protein BRAFLDRAFT_126796 [Branchiostoma floridae]
Length = 375
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 195 RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWNKLKESEKAVYQEKAL 253
+D PK +GY F E+ +++ +P EI+RM+G W+KL EK Y ++A
Sbjct: 120 KDVNAPKAPLTGYVRFLNERREKMRQDNPNVPFPEITRMLGNEWSKLAPHEKQQYLDEAE 179
Query: 254 KDKERYRIEMEDYRE 268
KDKERY E+E+Y++
Sbjct: 180 KDKERYMKELEEYQQ 194
>gi|355762621|gb|EHH62030.1| hypothetical protein EGM_20207 [Macaca fascicularis]
Length = 201
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++ + +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVPKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|444720594|gb|ELW61376.1| High mobility group protein B3 [Tupaia chinensis]
Length = 124
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEK 251
K++D PK SG+ FF+E H ++K + G R++++ +GE+WN L +S+K Y K
Sbjct: 12 KKKDSNAPKRPPSGFFLFFSEFHPKIKSSNHGISIRDVAKTLGEMWNNLSDSKKQSYITK 71
Query: 252 ALKDKERYRIEMEDYRERLK 271
K KER ++ D++ + K
Sbjct: 72 PAKLKERDEKDVTDFKSKGK 91
>gi|148682307|gb|EDL14254.1| mCG114640 [Mus musculus]
Length = 200
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L ++EK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|412992276|emb|CCO19989.1| nucleosome binding protein [Bathycoccus prasinos]
Length = 94
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALK 254
DP PK N S Y FF +Q A++ +P K E+ + +GELW + +SEK Y +KA
Sbjct: 20 DPNAPKRNLSAYFFFMNDQRAKVVKANPDMKVTEVGKKLGELWRAMSDSEKVPYNKKADA 79
Query: 255 DKERYRIEMEDYRER 269
DK RY Y+ +
Sbjct: 80 DKVRYEKAKAAYKPK 94
>gi|397788069|gb|AFO66683.1| SoxF1 [Sycon ciliatum]
Length = 447
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 207 YNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMED 265
+ + ++ RL +HPG + E+SR++G+ WNK+ +SEK Y+ +A++ E +R++ D
Sbjct: 59 FMVWAQQERPRLSAIHPGIHNAELSRLLGQNWNKMDDSEKQPYKAEAIRIAELHRLQHPD 118
Query: 266 YR 267
Y+
Sbjct: 119 YK 120
>gi|402578739|gb|EJW72692.1| hypothetical protein WUBG_16399, partial [Wuchereria bancrofti]
Length = 116
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 205 SGYNFFFAEQHARLKPLHP-GKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRIEM 263
S + FF ++ ++ HP K ++++ +G W L E E+AVY+ KAL+DKERY EM
Sbjct: 1 SAFFFFSHDKRPEVQQQHPEWKVGQVAQELGRFWKALGEEERAVYERKALEDKERYAEEM 60
Query: 264 EDYR 267
+Y+
Sbjct: 61 RNYK 64
>gi|302411796|ref|XP_003003731.1| nucleosome binding protein [Verticillium albo-atrum VaMs.102]
gi|261357636|gb|EEY20064.1| nucleosome binding protein [Verticillium albo-atrum VaMs.102]
gi|346978438|gb|EGY21890.1| nucleosome binding protein [Verticillium dahliae VdLs.17]
Length = 102
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 188 KKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKA 246
KK++ ++DP PK S Y FF EQ ++ +PG ++ +++GE W L E ++
Sbjct: 13 KKAKRAKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNEKQRG 72
Query: 247 VYQEKALKDKERYRIEMEDY 266
Y+ KA+ DK+RY E Y
Sbjct: 73 PYEAKAVADKKRYEDEKAAY 92
>gi|320580355|gb|EFW94578.1| high-mobility group non-histone chromosomal protein, putative
[Ogataea parapolymorpha DL-1]
Length = 91
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALK 254
DP PK + S Y FF EQ ++ +PG +I +++GE W L E+ KA Y+ KA
Sbjct: 15 DPNAPKRSLSAYMFFANEQRDIVRAENPGIAFGQIGKLLGEKWKALDEAGKAPYEAKAEA 74
Query: 255 DKERYRIEMEDY 266
DK+RY +E +Y
Sbjct: 75 DKKRYELEKSEY 86
>gi|339242839|ref|XP_003377345.1| high mobility group protein 1.2 [Trichinella spiralis]
gi|316973861|gb|EFV57410.1| high mobility group protein 1.2 [Trichinella spiralis]
Length = 229
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 149 VLYQAPQYPIHQVPSSYNVINNNNATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYN 208
+ Q ++ +++ + V + A+ G+++R+R KK DP PK S +
Sbjct: 79 TMTQEEKHRFYELAAKDRVRYDAELEAYGGDGLRKRKRSKK------DPNAPKRALSAFF 132
Query: 209 FFFAEQHARLKPLHP-GKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYR 267
FF + A ++ HP K ++++ +G +W + E EK +++ A KD+ RY +M++Y+
Sbjct: 133 FFSNSKRAEIQQAHPDWKVGQVAQELGRMWKAIDEDEKRKFEDMAAKDRTRYEEDMKNYK 192
>gi|6680231|ref|NP_032279.1| high mobility group protein B3 [Mus musculus]
gi|20138160|sp|O54879.3|HMGB3_MOUSE RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|2738989|gb|AAC16925.1| high mobility group protein homolog HMG4 [Mus musculus]
gi|15030059|gb|AAH11276.1| Hmgb3 protein [Mus musculus]
gi|26327985|dbj|BAC27733.1| unnamed protein product [Mus musculus]
gi|54035419|gb|AAH83352.1| High mobility group box 3 [Mus musculus]
gi|74146994|dbj|BAE27437.1| unnamed protein product [Mus musculus]
gi|74186760|dbj|BAE34835.1| unnamed protein product [Mus musculus]
gi|74192972|dbj|BAE34988.1| unnamed protein product [Mus musculus]
gi|74194280|dbj|BAE24671.1| unnamed protein product [Mus musculus]
gi|148694626|gb|EDL26573.1| mCG10155, isoform CRA_a [Mus musculus]
gi|148694628|gb|EDL26575.1| mCG10155, isoform CRA_a [Mus musculus]
gi|187957408|gb|AAI58038.1| High mobility group box 3 [Mus musculus]
Length = 200
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L ++EK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|410932269|ref|XP_003979516.1| PREDICTED: high mobility group-T protein-like [Takifugu rubripes]
gi|410933007|ref|XP_003979884.1| PREDICTED: high mobility group-T protein-like [Takifugu rubripes]
Length = 209
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK S + F +E ++K HPG E+++ +GELWN +K Y++KA K
Sbjct: 95 DPNAPKRPPSAFFIFCSEFRPKVKGEHPGLTIGEVAKKLGELWNNTNSEDKQPYEKKASK 154
Query: 255 DKERYRIEMEDYRERLKTGQVISDAIPLQ 283
KE+Y ++ YR++ K G + P +
Sbjct: 155 LKEKYEKDVAAYRQKTKGGSGSAGKAPAK 183
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Query: 195 RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD---REISRMIGELWNKLKESEKAVYQEK 251
R+ P+ S Y FF K HP E SR E W + EK +++
Sbjct: 7 REAGKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSRKCSERWKTMSVKEKGKFEDL 66
Query: 252 ALKDKERYRIEMEDY 266
A +DK RY EM DY
Sbjct: 67 AKQDKVRYDREMMDY 81
>gi|47190944|emb|CAF93003.1| unnamed protein product [Tetraodon nigroviridis]
Length = 204
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEK 251
KR+DP PK S + F +E +K PG + ++ +GE+W+KL +SEK Y+EK
Sbjct: 93 KRKDPNAPKRPPSAFFVFCSEYRPSVKQQFPGLSIGDCAKKLGEMWSKLSQSEKQPYEEK 152
Query: 252 ALKDKERYRIEMEDYR 267
A K +E+Y +M YR
Sbjct: 153 AQKLREKYDRDMVAYR 168
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Query: 192 IKRRDPAHPKPNRSGYNFF---FAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVY 248
+ R+D PK S Y FF E+H + P E S+ E W L +K +
Sbjct: 4 MMRKDVNKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSAGDKKCF 63
Query: 249 QEKALKDKERYRIEMEDY 266
++ A DK RY EM DY
Sbjct: 64 EDMAKADKVRYNREMRDY 81
>gi|148694627|gb|EDL26574.1| mCG10155, isoform CRA_b [Mus musculus]
Length = 206
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L ++EK Y KA K
Sbjct: 95 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAK 154
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 155 LKEKYEKDVADYKSKGK 171
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 20 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYDR 79
Query: 262 EMEDY 266
EM+DY
Sbjct: 80 EMKDY 84
>gi|449666240|ref|XP_004206307.1| PREDICTED: protein dead ringer homolog [Hydra magnipapillata]
Length = 105
Score = 51.2 bits (121), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP GG+ LDL+ L+ V + GGI+++ K+ +W++V +P TNA F L+++Y +
Sbjct: 37 IPTFGGQSLDLYALYNTVISFGGIDEVTKKGKWEQVFKTLGYPP-CTNADFALKQHYSRV 95
Query: 61 L 61
+
Sbjct: 96 I 96
>gi|391329170|ref|XP_003739049.1| PREDICTED: uncharacterized protein LOC100902621 [Metaseiulus
occidentalis]
Length = 1844
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEV-TAIFNFPSTATNASFVLRKYYQSL 60
P++ GK+LDLH+LF V G +K+ +WK+V + +F P L+ Y+
Sbjct: 446 PVVNGKDLDLHQLFSSVQKIGSFDKVTNLNKWKDVYSKLFKEPKATPAQGQQLKSAYKKY 505
Query: 61 LRDYEQIY 68
L+ +E +Y
Sbjct: 506 LQGFEDLY 513
>gi|221485710|gb|EEE23991.1| high mobility group protein, putative [Toxoplasma gondii GT1]
gi|221502922|gb|EEE28632.1| high mobility group protein, putative [Toxoplasma gondii VEG]
Length = 651
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 194 RRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISR---MIGELWNKLKESEKAVYQE 250
++DP PK S Y FF ++ A + P +I + MIGE W KL S+K YQ+
Sbjct: 572 KKDPNAPKKPLSSYMFFAKDKRAEILKKQPSLKSDIGKVGKMIGEEWAKLSSSQKMTYQK 631
Query: 251 KALKDKERYRIEMEDY 266
KA ++K RY+ EM Y
Sbjct: 632 KAEQEKIRYQREMSLY 647
>gi|428174151|gb|EKX43049.1| hypothetical protein GUITHDRAFT_140895 [Guillardia theta CCMP2712]
Length = 3013
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P + G++LD+ +L VT GG++++ K RRW+EV I N P +A+ L+ +Y L
Sbjct: 254 VPYMAGRKLDIFQLHGIVTNMGGMDEVTKNRRWREVCRIMNLPESASG---TLKFHYFRL 310
Query: 61 L 61
L
Sbjct: 311 L 311
>gi|367020358|ref|XP_003659464.1| hypothetical protein MYCTH_2296547 [Myceliophthora thermophila ATCC
42464]
gi|347006731|gb|AEO54219.1| hypothetical protein MYCTH_2296547 [Myceliophthora thermophila ATCC
42464]
Length = 101
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 186 RRKKSEIKR--RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKE 242
R K+E KR +DP PK S Y FF EQ ++ +PG ++ +++GE W L +
Sbjct: 8 RSGKAEKKRSKKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSD 67
Query: 243 SEKAVYQEKALKDKERYRIEMEDY 266
++A Y+ KA DK+RY E + Y
Sbjct: 68 KQRAPYEAKAAADKKRYEDEKQAY 91
>gi|256082673|ref|XP_002577578.1| hypothetical protein [Schistosoma mansoni]
gi|353233329|emb|CCD80684.1| hypothetical protein Smp_156170 [Schistosoma mansoni]
Length = 2565
Score = 51.2 bits (121), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P + + LDL+RL+V V RGG+ ++IK RRWKE++ + N ++A+ A LRK Y
Sbjct: 940 LPQVVKQPLDLYRLYVAVRERGGVAEVIKGRRWKEISQVINISASASAAY-ALRKNYCKF 998
Query: 61 LRDYE 65
L +YE
Sbjct: 999 LLEYE 1003
>gi|171848939|pdb|2YQI|A Chain A, Solution Structure Of The Second Hmg-Box Domain From High
Mobility Group Protein B3
Length = 81
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 200 PKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALKDKER 258
PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K KE+
Sbjct: 10 PKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEK 69
Query: 259 YRIEMEDYRER 269
Y ++ DY+ +
Sbjct: 70 YEKDVADYKSK 80
>gi|357501439|ref|XP_003621008.1| hypothetical protein MTR_7g005960 [Medicago truncatula]
gi|355496023|gb|AES77226.1| hypothetical protein MTR_7g005960 [Medicago truncatula]
Length = 107
Score = 51.2 bits (121), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/35 (68%), Positives = 27/35 (77%)
Query: 187 RKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPL 221
+KK EI R DP++ K NRSGYN FAEQHARLK L
Sbjct: 69 KKKLEILRGDPSNRKLNRSGYNLLFAEQHARLKLL 103
>gi|367043490|ref|XP_003652125.1| hypothetical protein THITE_126111 [Thielavia terrestris NRRL 8126]
gi|346999387|gb|AEO65789.1| hypothetical protein THITE_126111 [Thielavia terrestris NRRL 8126]
Length = 103
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 174 TAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRM 232
A SG +RR KK DP PK S Y FF EQ ++ +PG ++ ++
Sbjct: 4 AAKGKSGKVEKRRGKK------DPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKI 57
Query: 233 IGELWNKLKESEKAVYQEKALKDKERYRIEMEDY 266
+GE W L + ++A Y+ KA DK+RY E + Y
Sbjct: 58 LGERWKALSDKQRAPYEAKAAADKKRYEDEKQAY 91
>gi|332027416|gb|EGI67499.1| Protein dead ringer [Acromyrmex echinatior]
Length = 363
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 9 LDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLLRDYEQ 66
LDL+ L+ V RGG+ ++I ++ W+E+ P++ T+A+F LR Y L YE+
Sbjct: 6 LDLYELYKLVVLRGGLVEVINKKLWQEIIKGLRLPASITSAAFTLRTQYMKYLYPYEK 63
>gi|402583047|gb|EJW76991.1| hypothetical protein WUBG_12099 [Wuchereria bancrofti]
Length = 170
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 187 RKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHP-GKDREISRMIGELWNKLKESEK 245
RK+ +K+ DP PK S + FF ++ ++ HP K ++++ +G W L E E+
Sbjct: 85 RKRKRVKK-DPNAPKRALSAFFFFSHDKRPEVQQQHPEWKVGQVAQELGRFWKALGEEER 143
Query: 246 AVYQEKALKDKERY 259
AVY+ KAL+DKERY
Sbjct: 144 AVYERKALEDKERY 157
>gi|384253166|gb|EIE26641.1| hypothetical protein COCSUDRAFT_46169 [Coccomyxa subellipsoidea
C-169]
Length = 2010
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTA-TNASFVLRKYYQS 59
+PI +ELDL+R+F V +GG E + ++WKEV T+ASF +R+ Y+
Sbjct: 1383 VPIFAHQELDLYRVFWSVMDKGGYEIVSANKQWKEVCRCLGVDLRGQTSASFNMRQNYER 1442
Query: 60 LLRDYEQIY----FFRSQDSWQGPSTNAV 84
L ++E + ++ + PS +A+
Sbjct: 1443 CLFEFEDYLSTGAYIADINAGRAPSADAI 1471
>gi|406862701|gb|EKD15750.1| nucleosome binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 102
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 189 KSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAV 247
++E K++DP PK S Y FF EQ ++ +PG ++ +++GE W L + ++
Sbjct: 14 RTEKKKKDPNAPKRGLSAYMFFANEQRENVREENPGITFGQVGKVLGERWKALNDKQRTP 73
Query: 248 YQEKALKDKERYRIEMEDY 266
Y+ KA +DK+RY E Y
Sbjct: 74 YEAKAAQDKKRYEDEKASY 92
>gi|429860623|gb|ELA35353.1| nucleosome binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 103
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 173 ATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISR 231
AT +G ++R KK DP PK S Y FF EQ ++ +PG ++ +
Sbjct: 5 ATKRGAAGKVEKKRGKK------DPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGK 58
Query: 232 MIGELWNKLKESEKAVYQEKALKDKERYRIEMEDY 266
++GE W L + ++A Y+ KA DK+RY E + Y
Sbjct: 59 ILGERWKALNDKQRAPYEAKAAADKKRYEDEKQAY 93
>gi|401412468|ref|XP_003885681.1| High mobility group protein 1, related [Neospora caninum Liverpool]
gi|325120101|emb|CBZ55655.1| High mobility group protein 1, related [Neospora caninum Liverpool]
Length = 98
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 194 RRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISR---MIGELWNKLKESEKAVYQE 250
++DP PK S Y FF ++ A + P +I + MIGE W KL S+K YQ+
Sbjct: 19 KKDPNAPKKPLSSYMFFAKDKRAEILKKQPSLKSDIGKVGKMIGEEWAKLSSSQKLTYQK 78
Query: 251 KALKDKERYRIEMEDYRER 269
KA ++K RY+ EM Y ++
Sbjct: 79 KAEQEKIRYQREMSLYNKK 97
>gi|196005089|ref|XP_002112411.1| hypothetical protein TRIADDRAFT_56397 [Trichoplax adhaerens]
gi|190584452|gb|EDV24521.1| hypothetical protein TRIADDRAFT_56397 [Trichoplax adhaerens]
Length = 253
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 13/124 (10%)
Query: 159 HQVPSSYNVINNNNATAHAVSGVQRR---------RRRKKSEI----KRRDPAHPKPNRS 205
++P ++ + + A++ Q++ ++R EI K+ DP PK ++
Sbjct: 85 REMPKAHEIAKMCGSEWRAMTASQKKPYDELAARDKQRYMEEISKFRKKADPDKPKRPQT 144
Query: 206 GYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMED 265
Y +F AE +K + ++++ + GE W + +EKA Y+ KDKERY+ EM+
Sbjct: 145 AYFYFLAEFRKAMKAKGVIEGKKLTSLSGEKWRAMTPAEKAKYEAMVTKDKERYQREMDA 204
Query: 266 YRER 269
YR++
Sbjct: 205 YRKK 208
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 201 KPNRSGYNFFFAEQHARLKP--LHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKER 258
K +S Y FF RLK K EI++M G W + S+K Y E A +DK+R
Sbjct: 63 KKPKSAYIFFTTSLRQRLKKSGREMPKAHEIAKMCGSEWRAMTASQKKPYDELAARDKQR 122
Query: 259 YRIEMEDYRER 269
Y E+ +R++
Sbjct: 123 YMEEISKFRKK 133
>gi|323456782|gb|EGB12648.1| hypothetical protein AURANDRAFT_17678, partial [Aureococcus
anophagefferens]
Length = 82
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWNKLKESEKAVYQEK 251
+R+DP PK RS Y FF + A +K LHP ++ R +G W L + +K Y
Sbjct: 4 RRKDPGAPKGRRSAYIFFGNAKRAEVKELHPDFSLGDVGRELGARWKALSDDDKKPYAAL 63
Query: 252 ALKDKERYRIEMEDYR 267
A D ERY EM Y+
Sbjct: 64 ATADAERYDREMAAYK 79
>gi|410046813|ref|XP_003313802.2| PREDICTED: LOW QUALITY PROTEIN: AT-rich interactive
domain-containing protein 2 [Pan troglodytes]
Length = 1846
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 15/87 (17%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKII-------------KERRWKEVTAIFNFPSTAT 47
IP +GG+ +L R+ + R I+ ++ +W E+ FNFP + +
Sbjct: 37 IPAVGGR--NLCRMGIYFIVRLRFSXIVHVQTTVPVFYQVSEKNQWGEIVEEFNFPRSCS 94
Query: 48 NASFVLRKYYQSLLRDYEQIYFFRSQD 74
NA+F L++YY L YE+++ F D
Sbjct: 95 NAAFALKQYYLRYLEKYEKVHHFGEDD 121
>gi|358410870|ref|XP_003581858.1| PREDICTED: high mobility group protein B3-like [Bos taurus]
Length = 197
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
E+Y ++ DY+ + K
Sbjct: 149 LXEKYEKDVADYKSKGK 165
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y+FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYSFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEIAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|302926833|ref|XP_003054372.1| HMG box-containing protein [Nectria haematococca mpVI 77-13-4]
gi|256735313|gb|EEU48659.1| HMG box-containing protein [Nectria haematococca mpVI 77-13-4]
Length = 101
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 194 RRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKA 252
++DP PK S Y FF EQ ++ +PG ++ +++GE W L E ++A Y+ KA
Sbjct: 18 KKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNEKQRAPYEAKA 77
Query: 253 LKDKERYRIEMEDY 266
DK+RY E + Y
Sbjct: 78 AADKKRYEDEKQAY 91
>gi|290562443|gb|ADD38618.1| Non-histone chromosomal protein 6 [Lepeophtheirus salmonis]
Length = 125
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 204 RSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALKDKERYRIE 262
R+ Y +F EQ ++ ++P ++S+++G W K+ E +K V+ K++ DK RY E
Sbjct: 36 RTSYLYFVCEQRKIIRKMNPSFSFSKVSKLLGIEWKKMSEKDKHVFHVKSIHDKHRYDRE 95
Query: 263 MEDYRERLKTG 273
M DY ++ G
Sbjct: 96 MLDYTQKKVNG 106
>gi|444730270|gb|ELW70657.1| High mobility group protein 20A [Tupaia chinensis]
Length = 321
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|339234763|ref|XP_003378936.1| thymus high mobility group box protein TOX [Trichinella spiralis]
gi|316978470|gb|EFV61455.1| thymus high mobility group box protein TOX [Trichinella spiralis]
Length = 328
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 181 VQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWNK 239
V + R K+ + KR+DP P+ S Y FF + A +K +P E+S+++ +W+
Sbjct: 164 VVKSRTPKRRQNKRKDPNEPQKPVSAYALFFRDTQATIKGQNPNATFGEVSKIVAAMWDN 223
Query: 240 LKESEKAVYQEKALKDKERYRIEMEDYRERL 270
L K Y++K K+ Y + YR L
Sbjct: 224 LAADSKNAYKQKTEMAKKDYLKQCAAYRANL 254
>gi|405960935|gb|EKC26804.1| High mobility group protein 20A [Crassostrea gigas]
Length = 341
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 195 RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKAL 253
RD PKP +GY F E+ L+ +P E+ R++G W KL + EK + ++A
Sbjct: 95 RDSNAPKPALNGYLHFLNERREILRRENPTMAFAEMIRVLGAEWTKLPQHEKQRFLDEAE 154
Query: 254 KDKERYRIEMEDYR 267
KDKERY EME Y+
Sbjct: 155 KDKERYNREMEAYQ 168
>gi|46105649|ref|XP_380561.1| hypothetical protein FG00385.1 [Gibberella zeae PH-1]
gi|110287687|sp|Q4IQX3.1|NHP6_GIBZE RecName: Full=Non-histone chromosomal protein 6
gi|408400690|gb|EKJ79767.1| hypothetical protein FPSE_00047 [Fusarium pseudograminearum CS3096]
Length = 101
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 194 RRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKA 252
++DP PK S Y FF EQ ++ +PG ++ +++GE W L E ++A Y+ KA
Sbjct: 18 KKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNEKQRAPYEAKA 77
Query: 253 LKDKERYRIEMEDY 266
DK+RY E + Y
Sbjct: 78 AADKKRYEDEKQAY 91
>gi|325181279|emb|CCA15692.1| high mobility group protein putative [Albugo laibachii Nc14]
Length = 231
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 194 RRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKA 252
++DP+ PK S + F+ +LK +P K+ +IS+ +GE W+K + +KA Y EK
Sbjct: 117 KKDPSAPKRASSAFLFYSQVMRPQLKKENPDLKNTDISKRLGEAWSKATDVQKAPYVEKE 176
Query: 253 LKDKERYRIEMEDY 266
+D+ RY+ EME++
Sbjct: 177 REDRSRYKREMEEW 190
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 187 RKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG--KDREISRMIGELWNKLKESE 244
+K+ ++++ P PK +S Y F ++ +K P K ++ R I + W+K+ E E
Sbjct: 24 KKRKRLQKKAPGAPKRGKSPYILFSMDKREEIKSHMPADAKVTDVMRAIADAWSKMSEDE 83
Query: 245 KAVYQEKALKDKERYRIEMEDY 266
K ++ A DK+RY EM Y
Sbjct: 84 KQPWKSAAEVDKQRYEEEMASY 105
>gi|424513152|emb|CCO66736.1| predicted protein [Bathycoccus prasinos]
Length = 486
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 182 QRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKP--LHPGKDREISRMIGELWNK 239
+R+R+R K E PK RS Y +F + P HP E +++G W +
Sbjct: 384 ERKRKRPKKE-----AGQPKNARSAYVYFCEVSRPSIAPKGTHPA---ETMKLLGRKWQR 435
Query: 240 LKESEKAVYQEKALKDKERYRIEMEDYRE 268
L E ++ ++ K KDK RY IEM+++RE
Sbjct: 436 LSEEDRKPFEAKHEKDKARYEIEMKEWRE 464
>gi|390337111|ref|XP_782477.3| PREDICTED: uncharacterized protein LOC577135 [Strongylocentrotus
purpuratus]
Length = 694
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 200 PKPNRSGYNFFFAEQHARLKPLHPGK-DREISRMIGELWNKLKESEKAVYQEKALKDKER 258
P+P S Y F AEQ + HP R++S ++G++W L K Y + KDKER
Sbjct: 429 PRPPSSAYAMFLAEQREGYRESHPEVVGRKVSSLLGKMWTGLPPDVKKRYLDMEKKDKER 488
Query: 259 YRIEMEDYRE 268
Y E+++Y+E
Sbjct: 489 YIKEIKEYQE 498
>gi|241829658|ref|XP_002414770.1| brahma/SWI2-related protein BRG-1 [Ixodes scapularis]
gi|215508982|gb|EEC18435.1| brahma/SWI2-related protein BRG-1 [Ixodes scapularis]
Length = 1372
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
P I + LDL RL++ V RGG ++ K + WK+V + +++A++ LRK Y
Sbjct: 255 CPTISKQPLDLFRLYLIVKDRGGFVEVTKAKHWKDVAGVLGI-GASSSAAYTLRKQYVKH 313
Query: 61 LRDYEQIY 68
L +E Y
Sbjct: 314 LLPFECKY 321
>gi|237842875|ref|XP_002370735.1| high mobility group protein, putative [Toxoplasma gondii ME49]
gi|211968399|gb|EEB03595.1| high mobility group protein, putative [Toxoplasma gondii ME49]
Length = 644
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 194 RRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISR---MIGELWNKLKESEKAVYQE 250
++DP PK S Y FF ++ A + P +I + MIGE W KL S+K YQ+
Sbjct: 565 KKDPNAPKKPLSSYMFFAKDKRAEILKKQPTLKSDIGKVGKMIGEEWAKLSSSQKMTYQK 624
Query: 251 KALKDKERYRIEMEDY 266
KA ++K RY+ EM Y
Sbjct: 625 KAEQEKIRYQREMSLY 640
>gi|315051466|ref|XP_003175107.1| non-histone chromosomal protein 6 [Arthroderma gypseum CBS 118893]
gi|311340422|gb|EFQ99624.1| non-histone chromosomal protein 6 [Arthroderma gypseum CBS 118893]
Length = 102
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 184 RRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKE 242
R+ ++ E K++DP PK S Y F EQ A ++ +P ++ +++GE W L +
Sbjct: 9 RKTKRGVEKKKKDPNAPKRGLSAYMIFANEQRASVREENPSITFGQVGKVLGERWKALTD 68
Query: 243 SEKAVYQEKALKDKERYRIEMEDYRERL 270
++ Y+EKA DK+RY E Y RL
Sbjct: 69 KQRKPYEEKAATDKQRYEDEKAAYNSRL 96
>gi|189234904|ref|XP_968114.2| PREDICTED: similar to AT-rich interactive domain-containing protein
5B (ARID domain-containing protein 5B) (Mrf1-like)
(Modulator recognition factor 2) (MRF-2) [Tribolium
castaneum]
gi|270002738|gb|EEZ99185.1| serine protease H6 [Tribolium castaneum]
Length = 1176
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP +G KELDL+ + +V GG + + R WK + + +++T+A+ V+R++Y+
Sbjct: 333 IPSLGYKELDLYSFYTKVQKLGGYDSVTANRLWKSIFDDMSGHASSTSAATVIRRHYERF 392
Query: 61 LRDYEQ 66
L YE+
Sbjct: 393 LLPYER 398
>gi|340724328|ref|XP_003400534.1| PREDICTED: high mobility group protein 20A-like [Bombus terrestris]
Length = 329
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 167 VINNNNATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD 226
V NN A+A A + + R KK + RD PK +GY F ++ +++ +P
Sbjct: 50 VKKNNTASAVASNTINTTNRAKKRKKVPRDATAPKQPLTGYFRFLNDRREKVRTENPTLS 109
Query: 227 -REISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRE 268
EI++++ W+ L +K Y + A +DKERY E DY++
Sbjct: 110 FAEITKLLASEWSTLPADQKQQYLDAAEQDKERYNREFSDYKQ 152
>gi|148693919|gb|EDL25866.1| high mobility group 20A, isoform CRA_b [Mus musculus]
Length = 370
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 109 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 165
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 166 KLPPEEKQRYLDEADRDKERYMKELEQYQ 194
>gi|148693920|gb|EDL25867.1| high mobility group 20A, isoform CRA_c [Mus musculus]
Length = 403
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 109 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 165
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYRE 268
KL EK Y ++A +DKERY E+E Y++
Sbjct: 166 KLPPEEKQRYLDEADRDKERYMKELEQYQK 195
>gi|74628491|sp|Q7S045.1|NHP6_NEUCR RecName: Full=Non-histone chromosomal protein 6
gi|336464617|gb|EGO52857.1| Non-histone chromosomal protein 6 [Neurospora tetrasperma FGSC
2508]
gi|350296712|gb|EGZ77689.1| Non-histone chromosomal protein 6 [Neurospora tetrasperma FGSC
2509]
Length = 103
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 173 ATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISR 231
A + V++RR +K DP PK S Y FF EQ ++ +PG ++ +
Sbjct: 6 AKSKTTGKVEKRRAKK-------DPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGK 58
Query: 232 MIGELWNKLKESEKAVYQEKALKDKERYRIEMEDY 266
++GE W L + ++A Y+ KA DK+RY E + Y
Sbjct: 59 ILGERWKALSDKQRAPYEAKAAADKKRYEDEKQAY 93
>gi|408394832|gb|EKJ74029.1| hypothetical protein FPSE_05803 [Fusarium pseudograminearum CS3096]
Length = 1730
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 81/199 (40%), Gaps = 19/199 (9%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPS-TATNASFVLRKYYQS 59
+P + K LDL+RL V +RGG EK+ K ++W E+ + ++ S L+ YQ
Sbjct: 181 LPYVDKKPLDLYRLKKAVESRGGFEKVCKHKKWAEIGRDLGYSGKIMSSLSTSLKNSYQR 240
Query: 60 LLRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAV-LPEARPASS 118
L YE+ Y ++ P T PSP Q+ +++ +N V L PA S
Sbjct: 241 WLCPYEE-YLRLAKPGVHQQLEQEYGGPLT--PSPG-QTPIRRSNVNTPVSLRGDSPARS 296
Query: 119 GGSPVIGVIDGKFESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATAHAV 178
+ + G + +ET + AP P+ Q P+S N+
Sbjct: 297 ASDALQATLGG-----------VKTETRDTPMADAP--PLPQAPTSGGFTAVNSGFTAVN 343
Query: 179 SGVQRRRRRKKSEIKRRDP 197
SG R SE K P
Sbjct: 344 SGFTSVNRGATSEPKSFTP 362
>gi|440912073|gb|ELR61675.1| Putative high mobility group protein B3-like protein, partial [Bos
grunniens mutus]
Length = 190
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEK 251
K++DP PK SG+ FF+E +++K +PG ++++ +GE+WN L +S+K +Y K
Sbjct: 84 KKKDPNAPKRPPSGFFLFFSEFCSKIKSTNPGISIGDVAKKLGEMWNNLSDSKKQLYINK 143
Query: 252 ALKDKERYRIEMEDYR 267
K K +Y ++ DY+
Sbjct: 144 DAKLK-KYEKDVADYK 158
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 192 IKRRDPAHPKPNRSGYNFF--FAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQ 249
+ + DP PK S + FF + + P P E S+ E W + EK+ +
Sbjct: 1 MAKGDPEKPKGKMSAHAFFVQMCRKKHKKTPKVPVNFAEFSKKCSERWKTMSGKEKSTFD 60
Query: 250 EKALKDKERYRIEMEDY 266
E A DK Y EM+DY
Sbjct: 61 EMAKADKVHYNQEMKDY 77
>gi|213407940|ref|XP_002174741.1| predicted protein [Schizosaccharomyces japonicus yFS275]
gi|212002788|gb|EEB08448.1| predicted protein [Schizosaccharomyces japonicus yFS275]
Length = 134
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 192 IKRRDPAHPKPNRSGYNFFFAEQHARLKPLHP-GKDREISRMIGELWNKLKESEKAVYQE 250
+R+DP PK N S + FF ++K +P +I ++G+ W L EK Y+E
Sbjct: 8 TRRKDPNAPKRNMSAFMFFSMSNREKIKEENPEATFGQIGSLLGKKWKTLTAVEKEPYEE 67
Query: 251 KALKDKERYRIEMEDYRERLKTGQVI 276
KA KDKERY E E + KTG+ +
Sbjct: 68 KARKDKERY--ERECMKGPAKTGEPV 91
>gi|170056683|ref|XP_001864141.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876428|gb|EDS39811.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 372
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 195 RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKAL 253
+DP PK + S + +F E+ ++K L+P +I++ +G W+ + K+ Y++ A
Sbjct: 227 KDPNAPKRSLSAFFWFCHEERNKVKALNPEYGVGDIAKELGRKWSDMDAEVKSRYEQMAE 286
Query: 254 KDKERYRIEMEDYRERLKT---GQVISDAIPL 282
KDK RY EM +Y+ + K GQV A+ L
Sbjct: 287 KDKARYEAEMTEYKLKCKNEQGGQVQGQALNL 318
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 200 PKPNRSGYNFFFAEQHARLKPLHPGKD---REISRMIGELWNKLKESEKAVYQEKALKDK 256
P+ + Y FF K HP + E SR E W + + EK + E A KDK
Sbjct: 140 PRGRMTAYAFFVQTCREEHKKKHPEEQVIFAEFSRKCAERWKTMLDKEKQRFHEMAEKDK 199
Query: 257 ERYRIEMEDY 266
RY +EM+ Y
Sbjct: 200 ARYELEMQSY 209
>gi|345494441|ref|XP_001603951.2| PREDICTED: lysine-specific demethylase lid [Nasonia vitripennis]
Length = 1704
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP++ K LDL+ L VT GGIE + KERRW +V +PS + S +L+ +Y+ +
Sbjct: 137 IPLVERKALDLYSLHRIVTDEGGIETVTKERRWAKVANKLGYPSGRSVGS-ILKSHYERI 195
Query: 61 LRDYE 65
L ++
Sbjct: 196 LYPFD 200
>gi|291239777|ref|XP_002739798.1| PREDICTED: AT rich interactive domain 2 (ARID, RFX-like)-like
[Saccoglossus kowalevskii]
Length = 95
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 37/56 (66%)
Query: 2 PIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYY 57
P G +ELDL+ L+ +VTA GG K+ +W+++ +F+ P ++A+F +R++Y
Sbjct: 38 PAFGRQELDLYLLYSKVTAMGGFTKVSDGGKWEDLLELFDTPKNCSHAAFAVRQFY 93
>gi|355694827|gb|AER99798.1| high-mobility group 20A [Mustela putorius furo]
Length = 349
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|410928771|ref|XP_003977773.1| PREDICTED: TOX high mobility group box family member 4-B-like
[Takifugu rubripes]
Length = 684
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 177 AVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGE 235
+V GV ++ +K ++DP P+ S Y FF + A +K +P E+S+++
Sbjct: 279 SVPGVVGNKKGRK----KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSASFGEVSKIVAS 334
Query: 236 LWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISD 278
+W+ L E +K VY+ K K+ Y + Y+ + Q I+D
Sbjct: 335 MWDSLAEEQKQVYKRKTEAAKKEYLKALAAYKAN-QLSQPITD 376
>gi|395847762|ref|XP_003796535.1| PREDICTED: high mobility group protein B3-like [Otolemur garnettii]
Length = 255
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEK 251
K++DP P SG+ F +E H ++K +PG ++++ + E+W+ L SEK Y K
Sbjct: 109 KKKDPNAPTRPPSGFCLFCSEFHPKIKSTNPGISIGDVAKKLSEMWSNLSGSEKQPYITK 168
Query: 252 ALKDKERYRIEMEDYRERLK 271
A + +E+Y ++ DY+ + K
Sbjct: 169 AAQLREKYEKDVADYKSKGK 188
>gi|298707551|emb|CBJ30135.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 458
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 190 SEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVY 248
S++ R+D A PK +S Y F+ E+ A K PG +I+ +GE W +L + K Y
Sbjct: 351 SKMSRKDSARPKGPQSSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPY 410
Query: 249 QEKALKDKERY 259
+KA D++RY
Sbjct: 411 TKKAEADRKRY 421
>gi|336272321|ref|XP_003350917.1| hypothetical protein SMAC_04223 [Sordaria macrospora k-hell]
gi|380090684|emb|CCC04854.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 103
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 173 ATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISR 231
A + V++RR +K DP PK S Y FF EQ ++ +PG ++ +
Sbjct: 6 AKSKTTGKVEKRRAKK-------DPNAPKRGLSAYMFFANEQRENVREENPGVTFGQVGK 58
Query: 232 MIGELWNKLKESEKAVYQEKALKDKERYRIEMEDY 266
++GE W L + ++A Y+ KA DK+RY E + Y
Sbjct: 59 ILGERWKALSDKQRAPYEAKAAADKKRYEDEKQAY 93
>gi|431893641|gb|ELK03462.1| High mobility group protein 20A [Pteropus alecto]
Length = 367
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 106 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 162
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 163 KLPPEEKQRYLDEADRDKERYMKELEQYQ 191
>gi|157822803|ref|NP_001101620.1| high mobility group protein 20A [Rattus norvegicus]
gi|149041741|gb|EDL95582.1| high mobility group 20A (predicted) [Rattus norvegicus]
Length = 347
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|301779535|ref|XP_002925179.1| PREDICTED: high mobility group protein 20A-like [Ailuropoda
melanoleuca]
gi|281343408|gb|EFB18992.1| hypothetical protein PANDA_014629 [Ailuropoda melanoleuca]
Length = 347
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|335774950|gb|AEH58410.1| high mobility group protein 20A-like protein [Equus caballus]
Length = 347
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|74000793|ref|XP_853367.1| PREDICTED: high mobility group protein 20A isoform 2 [Canis lupus
familiaris]
Length = 347
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|351710199|gb|EHB13118.1| High mobility group protein B3 [Heterocephalus glaber]
Length = 191
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 189 KSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAV 247
K K++DP K SG+ F +E H ++K +PG ++++ +GE+WN L +SEK
Sbjct: 82 KGSKKKKDPNATKRPPSGFFLFCSEFHPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQP 141
Query: 248 YQEKALKDKERY 259
Y KA K KE+Y
Sbjct: 142 YITKAAKLKEKY 153
>gi|296236823|ref|XP_002763494.1| PREDICTED: high mobility group protein 20A [Callithrix jacchus]
Length = 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|395822564|ref|XP_003784587.1| PREDICTED: high mobility group protein 20A [Otolemur garnettii]
Length = 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|75707631|gb|ABA26278.1| inhibitor of BRAF35 [Mus musculus]
Length = 342
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 81 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 137
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 138 KLPPEEKQRYLDEADRDKERYMKELEQYQ 166
>gi|403304927|ref|XP_003943030.1| PREDICTED: high mobility group protein 20A [Saimiri boliviensis
boliviensis]
Length = 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|351694875|gb|EHA97793.1| High mobility group protein 20A [Heterocephalus glaber]
Length = 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|344284246|ref|XP_003413879.1| PREDICTED: high mobility group protein 20A [Loxodonta africana]
Length = 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|164422576|ref|XP_957906.2| hypothetical protein NCU09995 [Neurospora crassa OR74A]
gi|157069727|gb|EAA28670.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 95
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 173 ATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISR 231
A + V++RR +K DP PK S Y FF EQ ++ +PG ++ +
Sbjct: 6 AKSKTTGKVEKRRAKK-------DPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGK 58
Query: 232 MIGELWNKLKESEKAVYQEKALKDKERYRIEMEDY 266
++GE W L + ++A Y+ KA DK+RY E + Y
Sbjct: 59 ILGERWKALSDKQRAPYEAKAAADKKRYEDEKQAY 93
>gi|145233003|ref|XP_001399874.1| non-histone chromosomal protein 6 [Aspergillus niger CBS 513.88]
gi|317026969|ref|XP_003188583.1| non-histone chromosomal protein 6 [Aspergillus niger CBS 513.88]
gi|134056796|emb|CAK37704.1| unnamed protein product [Aspergillus niger]
gi|350634700|gb|EHA23062.1| hypothetical protein ASPNIDRAFT_206990 [Aspergillus niger ATCC
1015]
Length = 103
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 190 SEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVY 248
+E +++DP PK S Y FF + +++ +PG ++ +M+GE W L ++++ Y
Sbjct: 15 TERRKKDPNAPKRGLSAYMFFANDNREKVREENPGISFGQVGKMLGERWKALSDTDRRPY 74
Query: 249 QEKALKDKERYRIEMEDY 266
+EKA DK+RY E Y
Sbjct: 75 EEKAAADKKRYEDEKASY 92
>gi|326432726|gb|EGD78296.1| hypothetical protein PTSG_09362 [Salpingoeca sp. ATCC 50818]
Length = 1279
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 38/73 (52%)
Query: 198 AHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKE 257
A PKP R FF+ + R P E SR+ G+ W +L + KA Y E +D++
Sbjct: 389 APPKPKRYTSAFFYFLKEQRNNDPAPLSVTESSRVFGQKWKELSDEAKAPYLELERRDRQ 448
Query: 258 RYRIEMEDYRERL 270
RY +ME Y+E L
Sbjct: 449 RYARDMEKYKELL 461
Score = 43.5 bits (101), Expect = 0.17, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 200 PKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERY 259
PK RS Y FF E+ LK + +S++ GE+W L E +K VY++++ KDK RY
Sbjct: 483 PKRGRSAYIFFRKEKEEELKKICATPQELLSKL-GEMWQALSEDQKQVYKDRSEKDKLRY 541
Query: 260 RIEM 263
R E+
Sbjct: 542 RREL 545
>gi|159476440|ref|XP_001696319.1| high mobility group protein [Chlamydomonas reinhardtii]
gi|158282544|gb|EDP08296.1| high mobility group protein [Chlamydomonas reinhardtii]
Length = 179
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALK 254
DP PK + + +F +K +PG E+ ++IGE W L +K Y EKA K
Sbjct: 57 DPNAPKKPLTSFMYFSNAIRESVKSENPGIAFGEVGKVIGEKWKGLSADDKKEYDEKAAK 116
Query: 255 DKERYRIEMEDY 266
DKERY+ EME Y
Sbjct: 117 DKERYQKEMESY 128
>gi|15022805|ref|NP_080088.1| high mobility group protein 20A [Mus musculus]
gi|81917204|sp|Q9DC33.1|HM20A_MOUSE RecName: Full=High mobility group protein 20A; AltName: Full=HMG
box-containing protein 20A; AltName: Full=HMG
domain-containing protein HMGX1; AltName: Full=Inhibitor
of BRAF35; Short=iBRAF
gi|12835873|dbj|BAB23397.1| unnamed protein product [Mus musculus]
gi|15489430|gb|AAH13804.1| High mobility group 20A [Mus musculus]
gi|74140901|dbj|BAE22054.1| unnamed protein product [Mus musculus]
gi|148693918|gb|EDL25865.1| high mobility group 20A, isoform CRA_a [Mus musculus]
Length = 346
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 85 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 141
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 142 KLPPEEKQRYLDEADRDKERYMKELEQYQ 170
>gi|358379174|gb|EHK16855.1| hypothetical protein TRIVIDRAFT_217092 [Trichoderma virens Gv29-8]
Length = 102
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 194 RRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKA 252
++DP PK S Y FF EQ ++ +PG ++ +++GE W L + ++A Y+ KA
Sbjct: 20 KKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNDKQRAPYEAKA 79
Query: 253 LKDKERYRIEMEDY 266
DK+RY E + Y
Sbjct: 80 AADKKRYEDEKQAY 93
>gi|30584799|gb|AAP36652.1| Homo sapiens high-mobility group 20A [synthetic construct]
gi|61370777|gb|AAX43550.1| high-mobility group 20A [synthetic construct]
gi|61370782|gb|AAX43551.1| high-mobility group 20A [synthetic construct]
Length = 348
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|348555623|ref|XP_003463623.1| PREDICTED: high mobility group protein 20A-like [Cavia porcellus]
Length = 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|126272184|ref|XP_001362258.1| PREDICTED: high mobility group protein 20A [Monodelphis domestica]
Length = 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|12857100|dbj|BAB30892.1| unnamed protein product [Mus musculus]
Length = 346
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 85 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 141
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 142 KLPPEEKQRYLDEADRDKERYMKELEQYQ 170
>gi|395501084|ref|XP_003754928.1| PREDICTED: high mobility group protein 20A [Sarcophilus harrisii]
Length = 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|26333131|dbj|BAC30283.1| unnamed protein product [Mus musculus]
Length = 379
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 85 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 141
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 142 KLPPEEKQRYLDEADRDKERYMKELEQYQ 170
>gi|440909289|gb|ELR59212.1| High mobility group protein 20A [Bos grunniens mutus]
Length = 351
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|45946405|gb|AAH68257.1| Hmg20a protein [Mus musculus]
Length = 379
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 85 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 141
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 142 KLPPEEKQRYLDEADRDKERYMKELEQYQ 170
>gi|115497282|ref|NP_001069105.1| high mobility group protein 20A [Bos taurus]
gi|111307054|gb|AAI20109.1| High-mobility group 20A [Bos taurus]
gi|296475408|tpg|DAA17523.1| TPA: high-mobility group 20A [Bos taurus]
Length = 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|344305949|ref|XP_003421652.1| PREDICTED: TOX high mobility group box family member 4-like
[Loxodonta africana]
Length = 619
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 186 RRKKSEIKRR--DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKE 242
+++K+ KRR DP P+ S Y FF + A +K +P E+S+++ +W+ L E
Sbjct: 207 KKQKAPKKRRKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGE 266
Query: 243 SEKAVYQEKALKDKERYRIEMEDYRE 268
+K VY+ K K+ Y + Y++
Sbjct: 267 EQKQVYKRKTEAAKKEYLKALAAYKD 292
>gi|350586820|ref|XP_003482285.1| PREDICTED: high mobility group protein 20A [Sus scrofa]
gi|350596463|ref|XP_003484278.1| PREDICTED: high mobility group protein 20A-like [Sus scrofa]
Length = 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|361127235|gb|EHK99210.1| putative Non-histone chromosomal protein 6 [Glarea lozoyensis
74030]
Length = 100
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 185 RRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKES 243
+R K++E K++DP PK S Y FF EQ ++ +PG ++ +++GE W L ++
Sbjct: 8 KRAKRTEKKKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKVLGERWKALSDT 67
Query: 244 EKAVYQEKALKDKERYRIEMEDY 266
++ Y KA DK RY E +Y
Sbjct: 68 QRKPYAAKADADKIRYEEEKANY 90
>gi|354471461|ref|XP_003497961.1| PREDICTED: high mobility group protein 20A-like [Cricetulus
griseus]
gi|344247669|gb|EGW03773.1| High mobility group protein 20A [Cricetulus griseus]
Length = 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|426248262|ref|XP_004017883.1| PREDICTED: high mobility group protein 20A [Ovis aries]
Length = 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|390348780|ref|XP_003727081.1| PREDICTED: high mobility group B protein 13-like
[Strongylocentrotus purpuratus]
Length = 238
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 197 PAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALKD 255
PA PK + + F +EQ +L + P ++++ IG +W L E EK VY+
Sbjct: 51 PAKPKRPLTSFFQFTSEQRPKLTAMEPNLSVTDVTKRIGAMWRDLSEDEKEVYRLDFESR 110
Query: 256 KERYRIEMEDYRERLKTGQVIS 277
+E+Y EMEDYR RL Q+ S
Sbjct: 111 REKYTEEMEDYRSRLTDEQLDS 132
>gi|62897761|dbj|BAD96820.1| high-mobility group 20A variant [Homo sapiens]
Length = 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|410960786|ref|XP_003986968.1| PREDICTED: high mobility group protein 20A [Felis catus]
Length = 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|67524855|ref|XP_660489.1| hypothetical protein AN2885.2 [Aspergillus nidulans FGSC A4]
gi|74597086|sp|Q5B995.1|NHP6_EMENI RecName: Full=Non-histone chromosomal protein 6
gi|40744280|gb|EAA63456.1| hypothetical protein AN2885.2 [Aspergillus nidulans FGSC A4]
gi|259486178|tpe|CBF83812.1| TPA: Non-histone chromosomal protein 6
[Source:UniProtKB/Swiss-Prot;Acc:Q5B995] [Aspergillus
nidulans FGSC A4]
Length = 106
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEK 251
K++DP PK S Y FF + +++ +PG ++ +M+GE W L + E+ Y++K
Sbjct: 20 KKKDPNAPKRGLSAYMFFANDNRDKVREENPGISFGQVGKMLGEKWKSLSDKERKPYEDK 79
Query: 252 ALKDKERYRIEMEDYRERLKTGQVISD 278
A DK+RY ED + K G+ D
Sbjct: 80 AAADKKRY----EDEKAAYKAGEAEED 102
>gi|395844161|ref|XP_003794831.1| PREDICTED: uncharacterized protein LOC100953571 [Otolemur
garnettii]
Length = 357
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEK 251
K++DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y K
Sbjct: 252 KKKDPNAPKTPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNSLSDSEKQPYITK 311
Query: 252 ALKDKERYRIEMEDYRERLK 271
A + KE+ ++ DY+ + K
Sbjct: 312 AAQLKEKDEKDVADYKSKGK 331
>gi|297697200|ref|XP_002825755.1| PREDICTED: high mobility group protein 20A isoform 1 [Pongo abelii]
gi|332252689|ref|XP_003275487.1| PREDICTED: high mobility group protein 20A [Nomascus leucogenys]
Length = 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|345309945|ref|XP_003428904.1| PREDICTED: LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily E
member 1-related-like [Ornithorhynchus anatinus]
Length = 395
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 175 AHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMI 233
AH V++R K + K+ P PK +GY F E+ +++ LHP EI++M+
Sbjct: 4 AHEEEPVKKRGWPKGKKRKKILPNGPKAPVTGYVRFLNERREQIRMLHPDLPFPEITKML 63
Query: 234 GELWNKLKESEKAVYQEKALKDKERYRIEMEDYRE 268
G W+KL+ ++K Y ++A ++K++Y E+ +Y++
Sbjct: 64 GAEWSKLQPTDKQRYLDEAEREKQQYMKELREYQQ 98
>gi|291411606|ref|XP_002722079.1| PREDICTED: high-mobility group 20A [Oryctolagus cuniculus]
Length = 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|8922633|ref|NP_060670.1| high mobility group protein 20A [Homo sapiens]
gi|387763258|ref|NP_001248493.1| high mobility group protein 20A [Macaca mulatta]
gi|397479766|ref|XP_003811178.1| PREDICTED: high mobility group protein 20A isoform 1 [Pan paniscus]
gi|397479768|ref|XP_003811179.1| PREDICTED: high mobility group protein 20A isoform 2 [Pan paniscus]
gi|402874986|ref|XP_003901303.1| PREDICTED: high mobility group protein 20A isoform 1 [Papio anubis]
gi|402874988|ref|XP_003901304.1| PREDICTED: high mobility group protein 20A isoform 2 [Papio anubis]
gi|74734297|sp|Q9NP66.1|HM20A_HUMAN RecName: Full=High mobility group protein 20A; AltName: Full=HMG
box-containing protein 20A; AltName: Full=HMG
domain-containing protein 1; AltName: Full=HMG
domain-containing protein HMGX1
gi|7673025|gb|AAF66706.1|AF146222_1 HMG domain protein HMGX1 [Homo sapiens]
gi|7022956|dbj|BAA91782.1| unnamed protein product [Homo sapiens]
gi|7799126|emb|CAB90816.1| HMG20A [Homo sapiens]
gi|18314393|gb|AAH21959.1| High-mobility group 20A [Homo sapiens]
gi|30582271|gb|AAP35362.1| high-mobility group 20A [Homo sapiens]
gi|61361068|gb|AAX41984.1| high-mobility group 20A [synthetic construct]
gi|61361075|gb|AAX41985.1| high-mobility group 20A [synthetic construct]
gi|119619607|gb|EAW99201.1| high-mobility group 20A, isoform CRA_a [Homo sapiens]
gi|119619608|gb|EAW99202.1| high-mobility group 20A, isoform CRA_a [Homo sapiens]
gi|119619609|gb|EAW99203.1| high-mobility group 20A, isoform CRA_a [Homo sapiens]
gi|208966460|dbj|BAG73244.1| high-mobility group 20A protein [synthetic construct]
gi|355692904|gb|EHH27507.1| HMG box-containing protein 20A [Macaca mulatta]
gi|355778214|gb|EHH63250.1| HMG box-containing protein 20A [Macaca fascicularis]
gi|380784973|gb|AFE64362.1| high mobility group protein 20A [Macaca mulatta]
gi|383413847|gb|AFH30137.1| high mobility group protein 20A [Macaca mulatta]
gi|384942166|gb|AFI34688.1| high mobility group protein 20A [Macaca mulatta]
Length = 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|119628202|gb|EAX07797.1| AT rich interactive domain 1A (SWI- like), isoform CRA_d [Homo
sapiens]
Length = 1374
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 1041 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 1099
Query: 61 LRDYE 65
L +E
Sbjct: 1100 LYAFE 1104
>gi|449673822|ref|XP_002156471.2| PREDICTED: uncharacterized protein LOC100206911 [Hydra
magnipapillata]
Length = 368
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP+I K LD+ L+ V GG E+ +K R W ++ + P T T+ +F L+ Y L
Sbjct: 103 IPVIARKPLDIFILYNTVQKYGGFEQTLKNRMWSQIARELDLPRTMTSGAFTLKLKYVRL 162
Query: 61 LRDYE 65
L +E
Sbjct: 163 LYQFE 167
>gi|440631791|gb|ELR01710.1| non-histone chromosomal protein 6 [Geomyces destructans 20631-21]
Length = 101
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 183 RRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLK 241
+R + + E K++DP PK S Y FF EQ ++ +PG ++ +++GE W L
Sbjct: 8 KRASKPRGEKKKKDPNAPKRGLSAYMFFAQEQRDNVREENPGISFGQVGKVLGERWKALN 67
Query: 242 ESEKAVYQEKALKDKERYRIEMEDY 266
+ ++ Y+ KA +DK+RY E Y
Sbjct: 68 DKQRTPYETKAQEDKKRYEDEKASY 92
>gi|335892928|gb|AEH59759.1| high mobility group box 1 [Lethenteron camtschaticum]
Length = 208
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEK 251
K++DP PK S + + AE ++++ +PG I++ +GE+WN EK++Y+ K
Sbjct: 89 KKKDPNAPKRPPSAFFIYCAEYRSKVRAENPGLTIGSIAKKLGEMWNNAPADEKSIYERK 148
Query: 252 ALKDKERYRIEMEDYRE--RLKTGQVISDAIPLQQ 284
K KE+Y +M YR +++T +V S Q+
Sbjct: 149 TAKLKEKYDKDMASYRSKGKVETSKVASKPASKQR 183
>gi|1419611|emb|CAA67363.1| HMG [Lampetra fluviatilis]
Length = 208
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEK 251
K++DP PK S + + AE ++++ +PG I++ +GE+WN EK++Y+ K
Sbjct: 89 KKKDPNAPKRPPSAFFIYCAEYRSKVRAENPGLTIGSIAKKLGEMWNNAPADEKSIYERK 148
Query: 252 ALKDKERYRIEMEDYRE--RLKTGQVISDAIPLQQ 284
K KE+Y +M YR +++T +V S Q+
Sbjct: 149 TAKLKEKYDKDMASYRSKGKVETSKVASKPASKQR 183
>gi|426379912|ref|XP_004056631.1| PREDICTED: high mobility group protein 20A isoform 1 [Gorilla
gorilla gorilla]
gi|426379914|ref|XP_004056632.1| PREDICTED: high mobility group protein 20A isoform 2 [Gorilla
gorilla gorilla]
Length = 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|5689365|dbj|BAA83073.1| B120 [Homo sapiens]
Length = 1119
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 659 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 717
Query: 61 LRDYE 65
L +E
Sbjct: 718 LYAFE 722
>gi|358391632|gb|EHK41036.1| hypothetical protein TRIATDRAFT_259074 [Trichoderma atroviride IMI
206040]
Length = 101
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 194 RRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKA 252
++DP PK S Y FF EQ ++ +PG ++ +++GE W L + ++A Y+ KA
Sbjct: 19 KKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNDKQRAPYEAKA 78
Query: 253 LKDKERYRIEMEDY 266
DK+RY E + Y
Sbjct: 79 AADKKRYEDEKQAY 92
>gi|2588991|dbj|BAA23269.1| B120 [Homo sapiens]
Length = 1142
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 658 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 716
Query: 61 LRDYE 65
L +E
Sbjct: 717 LYAFE 721
>gi|355723900|gb|AES08043.1| transcription factor A, mitochondrial [Mustela putorius furo]
Length = 244
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 181 VQRRRRRKKSEIKRRDPA---HPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELW 237
+Q++R +KK+ IK+R+ PK RS YN F AE R + G + + I E W
Sbjct: 133 IQQKRLKKKALIKKRELTMLGKPKRPRSAYNIFIAE---RFQEAKDGTSQVKLKTINENW 189
Query: 238 NKLKESEKAVYQEKALKDKERYRIEMEDYRERL 270
L S+K VY + A DK RY EM+ + E++
Sbjct: 190 KNLSSSQKQVYIQLANDDKIRYYNEMKSWEEQM 222
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 198 AHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALKDK 256
++PK + Y F EQ K +P K+ E+ R I +LW +L +SEK +Y++ D
Sbjct: 48 SYPKKPLTSYVRFSKEQLPIFKAQNPAAKNSELIRKIAQLWRELPDSEKKIYEDAYRADW 107
Query: 257 ERYRIEMEDYRERLKTGQVISDAIPLQQR 285
+ Y+ E+ +E+L Q++S +QQ+
Sbjct: 108 QAYKEEINRIQEQLTPSQIVSLEKEIQQK 136
>gi|332026170|gb|EGI66312.1| Lysine-specific demethylase 5A [Acromyrmex echinatior]
Length = 1637
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP++ K LDL+ L VT GGIE + KERRW ++ +PS + S +L+ +Y+ +
Sbjct: 128 IPLVERKALDLYSLHKIVTDEGGIETVTKERRWAKIANKLGYPSGRSVGS-ILKNHYERI 186
Query: 61 LRDYE 65
L ++
Sbjct: 187 LYPFD 191
>gi|432116515|gb|ELK37328.1| High mobility group protein 20A [Myotis davidii]
Length = 347
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|347441690|emb|CCD34611.1| similar to transcription factor HMG [Botryotinia fuckeliana]
Length = 101
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK S Y FF EQ ++ +PG ++ +++GE W L E ++ Y+E A K
Sbjct: 20 DPNAPKRGLSAYMFFANEQRDNVREENPGISFGQVGKVLGERWKALNEKQRGPYEESAAK 79
Query: 255 DKERYRIEMEDY 266
DK+RY E +Y
Sbjct: 80 DKKRYEEEKANY 91
>gi|410919007|ref|XP_003972976.1| PREDICTED: lysine-specific demethylase 5A-like [Takifugu rubripes]
Length = 1857
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
P + K LDL+RL V++ GG E + KE+RW +V++ +PS S +LR +Y+ +
Sbjct: 255 FPHVERKILDLYRLSKIVSSEGGFETVCKEKRWSKVSSRMGYPSGRGTGS-LLRSHYERI 313
Query: 61 LRDYE 65
L YE
Sbjct: 314 LYPYE 318
>gi|313225928|emb|CBY21071.1| unnamed protein product [Oikopleura dioica]
Length = 291
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 183 RRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWNKLK 241
R R+ + K++DP P S Y FF E + +K P EIS+++ +W+ L
Sbjct: 181 RLSRKSPKKKKKKDPNEPSRPVSAYALFFRETQSLIKAQKPDATFGEISKIVASMWDALG 240
Query: 242 ESEKAVYQEKALKDKERYRIEMEDYRERL 270
+ EK +Y++K K Y E+ YR L
Sbjct: 241 DEEKTIYKQKTENAKRSYLRELASYRASL 269
>gi|116206850|ref|XP_001229234.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183315|gb|EAQ90783.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 96
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 174 TAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRM 232
A + SG ++ R+K +DP PK S Y FF EQ ++ +PG ++ ++
Sbjct: 4 AAKSRSGKAEKKTRQK-----KDPNAPKRGLSAYMFFANEQRDNVREENPGVSFGQVGKI 58
Query: 233 IGELWNKLKESEKAVYQEKALKDKERYRIEMEDY 266
+GE W L + ++A Y+ KA DK+RY E + Y
Sbjct: 59 LGERWKALSDKQRAPYEAKAAADKKRYEDEKQAY 92
>gi|55742128|ref|NP_001006760.1| high mobility group protein 20A [Xenopus (Silurana) tropicalis]
gi|82183397|sp|Q6DIJ5.1|HM20A_XENTR RecName: Full=High mobility group protein 20A; AltName: Full=HMG
box-containing protein 20A
gi|49523172|gb|AAH75543.1| high-mobility group 20A [Xenopus (Silurana) tropicalis]
Length = 345
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RK+S RD PK +GY F E+ +L+ P EI+R++G W+
Sbjct: 84 GWTKGRKRKRSP---RDNNAPKAPLTGYVRFMNERREQLRTERPDVPFPEITRIVGSEWS 140
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A KDKERY E++ Y+
Sbjct: 141 KLPAHEKQHYLDEAEKDKERYTKELQQYQ 169
>gi|171680363|ref|XP_001905127.1| hypothetical protein [Podospora anserina S mat+]
gi|170939808|emb|CAP65034.1| unnamed protein product [Podospora anserina S mat+]
Length = 98
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 194 RRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKA 252
++DP PK S Y FF EQ ++ +PG ++ +++GE W L + ++A Y+ KA
Sbjct: 20 KKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQRAPYEAKA 79
Query: 253 LKDKERYRIEMEDY 266
DK+RY E + Y
Sbjct: 80 AADKKRYEDEKQAY 93
>gi|148236833|ref|NP_001082803.1| high mobility group protein 20A [Danio rerio]
gi|126632105|gb|AAI33952.1| Zgc:162335 protein [Danio rerio]
Length = 291
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 186 RRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWNKLKESE 244
RR+K +K D PK +GY F E+ +L+ P EI+RM+G W+KL E
Sbjct: 33 RRRKKPLK--DSNAPKAPLTGYVRFMNERREQLRAERPDVPFPEITRMLGNEWSKLPADE 90
Query: 245 KAVYQEKALKDKERYRIEMEDY 266
K Y ++A KDKERY E+E Y
Sbjct: 91 KQRYLDEADKDKERYMRELEQY 112
>gi|71896259|ref|NP_001025565.1| high mobility group protein 20A [Gallus gallus]
gi|75571328|sp|Q5ZKF4.1|HM20A_CHICK RecName: Full=High mobility group protein 20A; AltName: Full=HMG
box-containing protein 20A
gi|53131076|emb|CAG31789.1| hypothetical protein RCJMB04_11c24 [Gallus gallus]
Length = 348
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 87 GWAKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 143
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 144 KLPPEEKRRYLDEADRDKERYMRELEQYQ 172
>gi|440298630|gb|ELP91261.1| HMG (high mobility group) box domain containing protein, partial
[Entamoeba invadens IP1]
Length = 214
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 192 IKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQE 250
I ++DP PK + Y F E + P K EI++ E+W +KE +K VY +
Sbjct: 110 ITKQDPNLPKKPMTPYLMFLNEHREEFREKFPELKITEIAKKAAEIWRDMKEEDKQVYLD 169
Query: 251 KALKDKERYRIEMEDYRER 269
KA K E+Y EM+ Y ER
Sbjct: 170 KAKKATEKYLEEMKTYNER 188
>gi|383854854|ref|XP_003702935.1| PREDICTED: high mobility group protein 20A-like [Megachile
rotundata]
Length = 329
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 166 NVINNNNATA----HAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPL 221
N I NNAT+ + + R ++RKK+ RD PK +GY F ++ +++
Sbjct: 48 NGIKKNNATSVVGSNTTNTTNRAKKRKKTP---RDATAPKQPLTGYFRFLNDRREKVRNE 104
Query: 222 HPGKD-REISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRE 268
+P EI++++ W+ L +K Y + A +DKERY E DY++
Sbjct: 105 NPTLSFAEITKLLASEWSNLPADQKQQYLDAAEQDKERYNREFSDYKQ 152
>gi|169610541|ref|XP_001798689.1| hypothetical protein SNOG_08374 [Phaeosphaeria nodorum SN15]
gi|160702095|gb|EAT84650.2| hypothetical protein SNOG_08374 [Phaeosphaeria nodorum SN15]
Length = 106
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 197 PAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALKD 255
P PK S Y FF EQ +++ +PG K E+ +M+GE W L E ++ Y+ KA D
Sbjct: 25 PNAPKRGLSAYMFFANEQRDKVREDNPGIKFGEVGKMLGEKWKALNEKQRTPYEAKAAAD 84
Query: 256 KERYRIEMEDYR 267
K+RY E Y+
Sbjct: 85 KKRYEEEKAAYQ 96
>gi|14133259|dbj|BAB55599.1| SWI related protein [Homo sapiens]
Length = 1208
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 658 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 716
Query: 61 LRDYE 65
L +E
Sbjct: 717 LYAFE 721
>gi|326926383|ref|XP_003209381.1| PREDICTED: high mobility group protein 20A-like [Meleagris
gallopavo]
Length = 348
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 87 GWAKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 143
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 144 KLPPEEKRRYLDEADRDKERYMRELEQYQ 172
>gi|327296079|ref|XP_003232734.1| non-histone chromosomal protein 6 [Trichophyton rubrum CBS 118892]
gi|326465045|gb|EGD90498.1| non-histone chromosomal protein 6 [Trichophyton rubrum CBS 118892]
Length = 102
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 184 RRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKE 242
R+ ++ E K++DP PK S Y F EQ A ++ +P ++ +++GE W L +
Sbjct: 9 RKTKRGVEKKKKDPNAPKRGLSAYMIFANEQRAAVREENPNITFGQVGKVLGERWKALSD 68
Query: 243 SEKAVYQEKALKDKERYRIEMEDYRER 269
++ Y+EKA DK+RY E Y R
Sbjct: 69 KQRVPYEEKAATDKQRYEDEKAAYNSR 95
>gi|307166621|gb|EFN60647.1| Histone demethylase JARID1A [Camponotus floridanus]
Length = 1566
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP++ K LDL+ L VT GGIE + KERRW ++ +PS + S +L+ +Y+ +
Sbjct: 106 IPLVERKALDLYSLHKIVTDEGGIETVTKERRWAKIANKLGYPSGRSVGS-ILKNHYERI 164
Query: 61 LRDYE 65
L ++
Sbjct: 165 LYPFD 169
>gi|401402785|ref|XP_003881334.1| high mobility group protein, related [Neospora caninum Liverpool]
gi|325115746|emb|CBZ51301.1| high mobility group protein, related [Neospora caninum Liverpool]
Length = 94
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 194 RRDPAHPKPNRSGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQE 250
++DP PK S + FF E+ R P K E+ +M+GE W KL +++K Y+
Sbjct: 14 KKDPNAPKRPLSAFIFFSKDKREEIIRKNPELKSKLAEVGKMVGEAWGKLSDAQKKPYES 73
Query: 251 KALKDKERYRIEMEDYRE 268
KA+ DK RY EM Y++
Sbjct: 74 KAVADKARYEREMIAYKK 91
>gi|729728|sp|P40618.2|HMGB3_CHICK RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|63494|emb|CAA45065.1| HMG2a [Gallus gallus]
Length = 202
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK S + F +E ++K +PG ++++ +GE+WN L + EK Y KA K
Sbjct: 89 DPNAPKRPPSAFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EKA + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYDR 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|378727181|gb|EHY53640.1| non-histone chromosomal protein 6 [Exophiala dermatitidis
NIH/UT8656]
Length = 102
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 189 KSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAV 247
+ E K++DP PK S Y FF EQ ++ +PG ++ +++G+ W L E ++
Sbjct: 13 RGEKKKKDPNAPKRGLSAYMFFANEQRESVREENPGISFGQVGKVLGDRWKALNEKQREP 72
Query: 248 YQEKALKDKERYRIEMEDYRERLKTGQVISD 278
Y++KA DK+RY ED + + + G SD
Sbjct: 73 YEKKAQADKKRY----EDEKAKYQAGGDASD 99
>gi|119628199|gb|EAX07794.1| AT rich interactive domain 1A (SWI- like), isoform CRA_b [Homo
sapiens]
Length = 1710
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 1041 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 1099
Query: 61 LRDYE 65
L +E
Sbjct: 1100 LYAFE 1104
>gi|451847653|gb|EMD60960.1| hypothetical protein COCSADRAFT_98214 [Cochliobolus sativus ND90Pr]
Length = 106
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALK 254
DP PK S Y FF EQ +++ +PG K E+ +++GE W L E ++ Y+ KA
Sbjct: 24 DPNAPKRGLSAYMFFANEQREKVREDNPGIKFGEVGKLLGEKWKALNEKQRQPYEAKAAL 83
Query: 255 DKERYRIEMEDY 266
DK+RY E Y
Sbjct: 84 DKKRYEQEKAAY 95
>gi|310793467|gb|EFQ28928.1| HMG box protein [Glomerella graminicola M1.001]
Length = 103
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 194 RRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKA 252
++DP PK S Y FF EQ ++ +PG ++ +++GE W L + ++A Y+ KA
Sbjct: 20 KKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKILGERWKALNDKQRAPYEAKA 79
Query: 253 LKDKERYRIEMEDY 266
DK+RY E + Y
Sbjct: 80 ATDKKRYEDEKQAY 93
>gi|344300446|gb|EGW30767.1| Non-histone chromosomal protein 6 [Spathaspora passalidarum NRRL
Y-27907]
Length = 93
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 187 RKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEK 245
++K+ K++DP PK + S Y FF E ++ +PG ++ +++GE W L EK
Sbjct: 7 KRKATRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALTADEK 66
Query: 246 AVYQEKALKDKERYRIEMEDYRER 269
Y+ KA DK+RY E +Y +R
Sbjct: 67 VPYENKAETDKKRYEKEKAEYAKR 90
>gi|224061734|ref|XP_002194749.1| PREDICTED: high mobility group protein 20A [Taeniopygia guttata]
Length = 348
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 87 GWAKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 143
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 144 KLPPEEKRRYLDEADRDKERYMRELEQYQ 172
>gi|334348387|ref|XP_003342057.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B3
[Monodelphis domestica]
Length = 208
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 195 RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKAL 253
+D PK SG+ F +E ++K +PG ++++ +GE+WN L ++EK Y KA
Sbjct: 88 KDSNAPKHPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYNNKAA 147
Query: 254 KDKERYRIEMEDYRERLKTGQVISDA 279
K KE+Y ++ D + ++K V A
Sbjct: 148 KLKEKYEKDVADNKSKIKFDSVKGTA 173
>gi|19112464|ref|NP_595672.1| HMG box protein [Schizosaccharomyces pombe 972h-]
gi|74638876|sp|Q9USU7.1|YHHB_SCHPO RecName: Full=HMG box-containing protein C28F2.11
gi|6018695|emb|CAB57940.1| HMG box protein [Schizosaccharomyces pombe]
Length = 310
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 174 TAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD---REIS 230
T+ AV+ + +R K RDPA PK S YN F Q + +K K +E++
Sbjct: 97 TSEAVASMTPNKR------KARDPAQPKRPPSAYNLFQKNQRSEIKESLGEKSNDVKEVN 150
Query: 231 RMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDY 266
+ + E W L E ++ Y+E+A K +E Y EM Y
Sbjct: 151 KAMHEKWGSLSEDDRKTYEEEASKLREAYEEEMAAY 186
>gi|114658303|ref|XP_510687.2| PREDICTED: high mobility group protein 20A isoform 2 [Pan
troglodytes]
gi|410296376|gb|JAA26788.1| high mobility group 20A [Pan troglodytes]
gi|410296378|gb|JAA26789.1| high mobility group 20A [Pan troglodytes]
gi|410352811|gb|JAA43009.1| high mobility group 20A [Pan troglodytes]
gi|410352813|gb|JAA43010.1| high mobility group 20A [Pan troglodytes]
Length = 347
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|440794204|gb|ELR15371.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 193
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK S Y FF ++K +P E+ +++G+ W+K +S+KA Y+ KA K
Sbjct: 106 DPNAPKKALSAYMFFAQANRDKVKKENPDATFGELGKLLGKQWSKASKSDKAKYEAKANK 165
Query: 255 DKERYRIEMEDY 266
DKERY E Y
Sbjct: 166 DKERYEKEKAKY 177
>gi|380476672|emb|CCF44585.1| non-histone chromosomal protein 6 [Colletotrichum higginsianum]
Length = 96
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 173 ATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISR 231
AT +G ++R KK DP PK S Y FF EQ ++ +PG ++ +
Sbjct: 5 ATKRGAAGKVDKKRAKK------DPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGK 58
Query: 232 MIGELWNKLKESEKAVYQEKALKDKERYRIEMEDY 266
++GE W L E ++ Y+ KA DK+RY E + Y
Sbjct: 59 ILGERWKALNEKQRQPYEAKAATDKKRYEDEKQAY 93
>gi|255552860|ref|XP_002517473.1| structure-specific recognition protein, putative [Ricinus communis]
gi|223543484|gb|EEF45015.1| structure-specific recognition protein, putative [Ricinus communis]
Length = 640
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ FF + +K +PG ++ +++G+ W KL EK Y+ KA
Sbjct: 552 DPNAPKKAMSGFMFFSQMERENVKKSNPGIAFGDVGKILGDKWKKLSAEEKEPYEAKARA 611
Query: 255 DKERYRIEMEDYR 267
DK+RY+ E+ Y+
Sbjct: 612 DKKRYKEEVSGYK 624
>gi|91091658|ref|XP_971261.1| PREDICTED: similar to predicted protein [Tribolium castaneum]
gi|270000885|gb|EEZ97332.1| hypothetical protein TcasGA2_TC011144 [Tribolium castaneum]
Length = 452
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 12/87 (13%)
Query: 186 RRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLK----PLHPGKDREISRMIGELWNKLK 241
R++K E+K P P +GYN + +Q K H EI+++IG W+ L
Sbjct: 172 RKRKPELKNLPPKAPA---TGYNLYLNDQRKLFKDSKLAFH-----EITKVIGNKWSNLS 223
Query: 242 ESEKAVYQEKALKDKERYRIEMEDYRE 268
EK Y KA +DK RYR E++ YR+
Sbjct: 224 LEEKRPYLAKAEEDKRRYREELKQYRQ 250
>gi|168270882|dbj|BAG10234.1| AT-rich interactive domain-containing protein 1A [synthetic
construct]
Length = 1359
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 680 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 738
Query: 61 LRDYE 65
L +E
Sbjct: 739 LYAFE 743
>gi|68533099|dbj|BAE06104.1| ARID1A variant protein [Homo sapiens]
Length = 1374
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 695 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 753
Query: 61 LRDYE 65
L +E
Sbjct: 754 LYAFE 758
>gi|351706443|gb|EHB09362.1| High mobility group protein B3 [Heterocephalus glaber]
Length = 226
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K PG ++++ +GE+WN L +SEK Y K K
Sbjct: 108 DPNAPKRPPSGFFLFCSEFRPKIKSTKPGITIGDVAKKLGEMWNNLSDSEKQPYITKVAK 167
Query: 255 DKERYRIEMEDYRERLKTG 273
KE++ ++ DY+ + K G
Sbjct: 168 LKEKHEKDVADYKSKGKFG 186
>gi|326437876|gb|EGD83446.1| hypothetical protein PTSG_04053 [Salpingoeca sp. ATCC 50818]
Length = 797
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWNKLKESEKAVYQEKALK 254
DP PK +S Y +F E ++K P +IS+ G LW L + EK Y++ A +
Sbjct: 663 DPNAPKGAKSAYIYFSTEMREKIKEEKPDLTLGQISQECGTLWRGLSDEEKKKYEKMAAE 722
Query: 255 DKERYRIEMEDYRER 269
DK+RY EM +Y+ +
Sbjct: 723 DKKRYEAEMAEYKAK 737
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 181 VQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWNK 239
V+ +++ +K+ +R P K ++ Y + + ++LK HP E+S+ +G+ W
Sbjct: 561 VKSKKKTQKASAAKRGP---KKAKTAYALWSSSARSKLKEQHPDLSFGELSKKLGQAWQD 617
Query: 240 LKESEKAVYQEKALKDKERYRIEMEDY 266
L + +KA + EKA +D++RY E + +
Sbjct: 618 LADEDKAEWNEKAKEDRQRYLKEKKKF 644
>gi|299472000|emb|CBN80083.1| high mobility group protein [Ectocarpus siliculosus]
Length = 242
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 194 RRDPAHPKPNRSGYNFFFAEQHARLKPLHP-GKDREISRMIGELWNKLKESEKAVYQEKA 252
++DP PK S + F RL+ +P K+ ++S+M+G+ WN++ + EK YQ KA
Sbjct: 134 KKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSDEEKLPYQTKA 193
Query: 253 LKDKERYRIEM 263
D RYR M
Sbjct: 194 HDDTLRYREAM 204
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 197 PAHPKPNRSGYNFFFAEQHARLKPLHP--GKDREISRMIGELWNKLKESEKAVYQEKALK 254
P P+ RS Y F E +K P K E+ + I W +L E++K + KA +
Sbjct: 51 PDAPRRGRSAYVLFSMEAREEVKNALPEGSKVTEVMKGIAAKWRELSETDKEEWTAKAAQ 110
Query: 255 DKERYRIEMEDYRERLK 271
DK+RY E+ Y LK
Sbjct: 111 DKDRYEQELSVYDGPLK 127
>gi|328909415|gb|AEB61375.1| high mobility group protein 20A-like protein, partial [Equus
caballus]
Length = 300
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 143 KLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|147898805|ref|NP_001087141.1| high mobility group protein 20A [Xenopus laevis]
gi|82181983|sp|Q6AZF8.1|HM20A_XENLA RecName: Full=High mobility group protein 20A; AltName: Full=HMG
box-containing protein 20A
gi|50603766|gb|AAH78062.1| Hmg20a-prov protein [Xenopus laevis]
Length = 345
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RK+S RD PK +GY F E+ +L+ P EI+R++G W+
Sbjct: 84 GWNKGRKRKRSP---RDNNAPKAPLTGYVRFMNERREQLRTERPDVPFPEITRIVGSEWS 140
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A KDKERY E++ Y+
Sbjct: 141 KLPAHEKQHYLDEAEKDKERYTKELQKYQ 169
>gi|427792165|gb|JAA61534.1| Putative hmg-box transcription factor 1, partial [Rhipicephalus
pulchellus]
Length = 443
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKA 252
DPA P+ +G+ F + +HPGKD R IS M+G+ W K+K EK +Y ++A
Sbjct: 361 DPAKPRRPMNGFMLFAQKHRGEYSHMHPGKDNRAISVMLGDQWRKMKSEEKKLYSQEA 418
>gi|194206436|ref|XP_001490860.2| PREDICTED: high mobility group protein 20A [Equus caballus]
Length = 322
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 61 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 117
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDY 266
KL EK Y ++A +DKERY E+E Y
Sbjct: 118 KLPPEEKQRYLDEADRDKERYMKELEQY 145
>gi|326475470|gb|EGD99479.1| nucleosome binding protein [Trichophyton tonsurans CBS 112818]
Length = 102
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 191 EIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQ 249
E K++DP PK S Y F EQ A ++ +P ++ +++GE W L + ++ Y+
Sbjct: 16 EKKKKDPNAPKRGLSAYMIFANEQRAAVREENPNITFGQVGKVLGERWKALSDKQRVPYE 75
Query: 250 EKALKDKERYRIEMEDYRER 269
EKA DK+RY E Y R
Sbjct: 76 EKAATDKQRYEDEKAAYNSR 95
>gi|427792167|gb|JAA61535.1| Putative hmg-box transcription factor 1, partial [Rhipicephalus
pulchellus]
Length = 443
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKA 252
DPA P+ +G+ F + +HPGKD R IS M+G+ W K+K EK +Y ++A
Sbjct: 361 DPAKPRRPMNGFMLFAQKHRGEYSHMHPGKDNRAISVMLGDQWRKMKSEEKKLYSQEA 418
>gi|358372276|dbj|GAA88880.1| nucleosome binding protein (Nhp6a) [Aspergillus kawachii IFO 4308]
Length = 104
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 191 EIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQ 249
E +++DP PK S Y FF + +++ +PG ++ +M+GE W L ++++ Y+
Sbjct: 17 ERRKKDPNAPKRGLSAYMFFANDNREKVREENPGISFGQVGKMLGERWKALSDTDRRPYE 76
Query: 250 EKALKDKERYRIEMEDY 266
EKA DK+RY E Y
Sbjct: 77 EKAAADKKRYEDEKASY 93
>gi|449266367|gb|EMC77420.1| High mobility group protein 20A [Columba livia]
Length = 345
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 84 GWAKGRKRKKP---LRDTNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 140
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYRE 268
KL EK Y ++A +DKERY E+E Y++
Sbjct: 141 KLPPEEKRRYLDEADRDKERYMRELEQYQK 170
>gi|327283394|ref|XP_003226426.1| PREDICTED: high mobility group protein 20A-like [Anolis
carolinensis]
Length = 347
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 86 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 142
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDY 266
KL EK Y ++A +DKERY E+E Y
Sbjct: 143 KLPPEEKRRYLDEADRDKERYMRELEQY 170
>gi|47211548|emb|CAF96113.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1561
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
P + K LDL+RL V++ GG E + KE+RW +V++ +PS S +LR +Y+ +
Sbjct: 101 FPHVERKVLDLYRLSKIVSSEGGFEAVCKEKRWSKVSSRMGYPSGRGTGS-LLRSHYERI 159
Query: 61 LRDYE 65
L YE
Sbjct: 160 LYPYE 164
>gi|402591482|gb|EJW85411.1| FACT complex subunit SSRP1-A [Wuchereria bancrofti]
Length = 684
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 189 KSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVY 248
+ E K++DP PK +S Y +F E ++ K E ++ G++W ++ E K Y
Sbjct: 538 RREKKKKDPNAPKKPQSAYFIWFGENYSSFKK-EGVSVTEAAQRAGKMWKEIDEETKKKY 596
Query: 249 QEKALKDKERYRIEMEDY 266
+E+A +DKERY EM++Y
Sbjct: 597 EERAKEDKERYAREMKEY 614
>gi|256082013|ref|XP_002577258.1| hypothetical protein [Schistosoma mansoni]
Length = 1498
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P + GK + L LFV V +RGG +++ R W EV PS NAS LR+ Y
Sbjct: 6 LPRLLGKPIKLSDLFVAVVSRGGYKRVCDRRWWLEVARELKLPSECANASVGLRRIYYQF 65
Query: 61 LRDYE 65
L +E
Sbjct: 66 LSHFE 70
>gi|47225926|emb|CAF98406.1| unnamed protein product [Tetraodon nigroviridis]
Length = 863
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 185 RRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKES 243
R+RKK +D PK +GY F ++ +L+ P EI+RM+G W+KL
Sbjct: 33 RKRKKP---MKDSNAPKAPLTGYVRFMNDRREQLRAERPDVPFPEITRMLGNEWSKLPPE 89
Query: 244 EKAVYQEKALKDKERYRIEMEDYRE 268
EK Y ++A +DKERY E+E Y++
Sbjct: 90 EKQRYLDEAERDKERYMRELEKYQK 114
>gi|432921036|ref|XP_004080022.1| PREDICTED: LOW QUALITY PROTEIN: TOX high mobility group box family
member 4-B-like [Oryzias latipes]
Length = 644
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 296 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKNEA 355
Query: 255 DKERYRIEMEDYRERLKTGQV 275
K+ Y + +YR+ T Q
Sbjct: 356 AKKDYFKALAEYRDSQNTTQA 376
>gi|387016388|gb|AFJ50313.1| High mobility group protein 20A-like [Crotalus adamanteus]
Length = 345
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 180 GVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWN 238
G + R+RKK RD PK +GY F E+ +L+ P EI+RM+G W+
Sbjct: 84 GWSKGRKRKKP---LRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWS 140
Query: 239 KLKESEKAVYQEKALKDKERYRIEMEDYR 267
KL EK Y ++A +DKERY E+E Y+
Sbjct: 141 KLPPEEKRRYLDEADRDKERYMKELEQYQ 169
>gi|301610309|ref|XP_002934685.1| PREDICTED: AT-rich interactive domain-containing protein 1A-like
isoform 1 [Xenopus (Silurana) tropicalis]
Length = 2055
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 853 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 911
Query: 61 LRDYE 65
L +E
Sbjct: 912 LYAFE 916
>gi|384493812|gb|EIE84303.1| hypothetical protein RO3G_09013 [Rhizopus delemar RA 99-880]
Length = 252
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWNKLKESEKAVYQEK 251
++RDP PK S Y F+ A + P E S++ GE W KL ++EK Y E
Sbjct: 54 RKRDPDFPKQPTSNYLFYCNSIRADVDKEFPSASFVEKSKIYGERWKKLSDAEKKPYNEM 113
Query: 252 ALKDKERYRIEMEDY 266
A K+KERY E+E Y
Sbjct: 114 AQKEKERYNRELETY 128
>gi|328769557|gb|EGF79601.1| hypothetical protein BATDEDRAFT_89692 [Batrachochytrium
dendrobatidis JAM81]
Length = 99
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 173 ATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISR 231
A A++G + +R + R+DP PK S + F E R++ +P ++ +
Sbjct: 2 APKQAMAGTKVAKRGDDKKKSRKDPDAPKRPLSAFMIFSKENRPRIREENPDASFGDLGK 61
Query: 232 MIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYR 267
++G W +L + +K VY +KA +DK RY EM Y+
Sbjct: 62 LLGAAWRELNDKDKQVYTDKADEDKGRYEREMSTYK 97
>gi|402077455|gb|EJT72804.1| non-histone chromosomal protein 6 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 101
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 177 AVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGE 235
A G + +RR K +DP PK S Y FF EQ ++ +PG ++ +++GE
Sbjct: 6 AKKGAKTEKRRGK-----KDPLAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGE 60
Query: 236 LWNKLKESEKAVYQEKALKDKERYRIEMEDY 266
W L + ++A Y KA DK+RY E Y
Sbjct: 61 RWKALSDKQRAPYDAKAAADKKRYEDEKAAY 91
>gi|397475678|ref|XP_003809257.1| PREDICTED: high mobility group protein B3-like [Pan paniscus]
Length = 165
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP+ PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 66 DPSAPKRPPSGFFLFSSEIRPKIKSTNPGISVGDVAKKLGEMWNNLNDSEKQPYITKAAK 125
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ D + + K
Sbjct: 126 LKEKYEKDVADSKSKGK 142
>gi|403295522|ref|XP_003938690.1| PREDICTED: high mobility group protein B3-like [Saimiri boliviensis
boliviensis]
Length = 202
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP K SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 89 DPNASKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 192 IKRRDPAHPKPNRSGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVY 248
+ + DP PK S Y FF E+H + P P E S+ E W + EK+ +
Sbjct: 1 MAKCDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
Query: 249 QEKALKDKERYRIEMEDY 266
E A DK RY EM+DY
Sbjct: 61 DEMAKADKVRYDREMKDY 78
>gi|432857024|ref|XP_004068516.1| PREDICTED: protein polybromo-1-like [Oryzias latipes]
Length = 1603
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 192 IKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWNKLKESEKAVYQE 250
+ +++ + K N SGY F +E A +K HP E+SR++G W L+ S KA Y+E
Sbjct: 1328 LSKKEGSKRKINMSGYILFSSEMRAVIKAQHPDFSFGELSRLVGTEWRNLETSRKAEYEE 1387
Query: 251 KALKDKERYRIEMEDYRERLKT--GQVISDAIPLQQRLPG 288
+A K E+ + ++ LK+ G S +PLQ R G
Sbjct: 1388 RAAKVAEQQERDRTQHQTFLKSDMGAYRSAMMPLQARAEG 1427
>gi|395854766|ref|XP_003799850.1| PREDICTED: AT-rich interactive domain-containing protein 1A isoform 1
[Otolemur garnettii]
Length = 2280
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 1039 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 1097
Query: 61 LRDYE 65
L +E
Sbjct: 1098 LYAFE 1102
>gi|124249109|ref|NP_001074288.1| AT-rich interactive domain-containing protein 1A [Mus musculus]
gi|288561880|sp|A2BH40.1|ARI1A_MOUSE RecName: Full=AT-rich interactive domain-containing protein 1A;
Short=ARID domain-containing protein 1A; AltName:
Full=BRG1-associated factor 250; Short=BAF250; AltName:
Full=BRG1-associated factor 250a; Short=BAF250A; AltName:
Full=Osa homolog 1; AltName: Full=SWI-like protein;
AltName: Full=SWI/SNF complex protein p270; AltName:
Full=SWI/SNF-related, matrix-associated, actin-dependent
regulator of chromatin subfamily F member 1
Length = 2283
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 1042 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 1100
Query: 61 LRDYE 65
L +E
Sbjct: 1101 LYAFE 1105
>gi|302497713|ref|XP_003010856.1| hypothetical protein ARB_02895 [Arthroderma benhamiae CBS 112371]
gi|291174401|gb|EFE30216.1| hypothetical protein ARB_02895 [Arthroderma benhamiae CBS 112371]
Length = 106
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 184 RRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKE 242
R+ ++ E K++DP PK S Y F EQ A ++ +P ++ +++GE W L +
Sbjct: 8 RKTKRGVEKKKKDPNAPKRGLSAYMIFANEQRAAVREENPNITFGQVGKVLGERWKALSD 67
Query: 243 SEKAVYQEKALKDKERYRIEMEDY 266
++ Y+EKA DK+RY E Y
Sbjct: 68 KQRVPYEEKAATDKQRYEDEKAAY 91
>gi|359319070|ref|XP_003638989.1| PREDICTED: AT-rich interactive domain-containing protein 1A [Canis
lupus familiaris]
Length = 2067
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 1042 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 1100
Query: 61 LRDYE 65
L +E
Sbjct: 1101 LYAFE 1105
>gi|359319068|ref|XP_852546.3| PREDICTED: AT-rich interactive domain-containing protein 1A isoform 1
[Canis lupus familiaris]
Length = 2284
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 1042 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 1100
Query: 61 LRDYE 65
L +E
Sbjct: 1101 LYAFE 1105
>gi|340992807|gb|EGS23362.1| hypothetical protein CTHT_0010300 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 104
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK S Y FF EQ ++ +PG ++ +++GE W L + ++A Y+ KA
Sbjct: 21 DPNAPKRGLSAYMFFANEQRDNVREENPGISFGQVGKILGERWKALTDKQRAPYEAKAAA 80
Query: 255 DKERYRIEMEDY 266
DK+RY E + Y
Sbjct: 81 DKKRYEDEKQAY 92
>gi|334328301|ref|XP_003341063.1| PREDICTED: LOW QUALITY PROTEIN: AT-rich interactive domain-containing
protein 1A-like [Monodelphis domestica]
Length = 2299
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 1054 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 1112
Query: 61 LRDYE 65
L +E
Sbjct: 1113 LYAFE 1117
>gi|395854768|ref|XP_003799851.1| PREDICTED: AT-rich interactive domain-containing protein 1A isoform 2
[Otolemur garnettii]
Length = 2063
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 1039 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 1097
Query: 61 LRDYE 65
L +E
Sbjct: 1098 LYAFE 1102
>gi|729737|sp|P40620.1|HMGL_VICFA RecName: Full=HMG1/2-like protein
Length = 149
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 195 RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR--EISRMIGELWNKLKESEKAVYQEKA 252
+DP PK S + F A+ + K HP + + GE W L E EKA Y ++A
Sbjct: 40 KDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRA 99
Query: 253 LKDKERYRIEMEDYRERL 270
LK KE Y I ++ Y ++L
Sbjct: 100 LKKKEEYEITLQAYNKKL 117
>gi|301610311|ref|XP_002934686.1| PREDICTED: AT-rich interactive domain-containing protein 1A-like
isoform 2 [Xenopus (Silurana) tropicalis]
Length = 1832
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 853 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 911
Query: 61 LRDYE 65
L +E
Sbjct: 912 LYAFE 916
>gi|148698102|gb|EDL30049.1| mCG20806 [Mus musculus]
Length = 1955
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 710 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 768
Query: 61 LRDYE 65
L +E
Sbjct: 769 LYAFE 773
>gi|417414095|gb|JAA53348.1| Putative swi-snf chromatin-remodeling complex protein, partial
[Desmodus rotundus]
Length = 2253
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 1014 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 1072
Query: 61 LRDYE 65
L +E
Sbjct: 1073 LYAFE 1077
>gi|440632195|gb|ELR02114.1| hypothetical protein GMDG_05273 [Geomyces destructans 20631-21]
Length = 541
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Query: 193 KRRDPAHPKPNR-------SGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKESEK 245
KR+ HPKP+ S Y F + LK P EI++++GE W L SEK
Sbjct: 107 KRKYRRHPKPDENAPERPPSAYVIFSNKMREDLK-GRPLSFTEIAKLVGENWQNLAPSEK 165
Query: 246 AVYQEKALKDKERYRIEMEDYR 267
+Y+++A KE+Y +E+ +YR
Sbjct: 166 ELYEQQAFAAKEKYTVELAEYR 187
>gi|431891218|gb|ELK02095.1| AT-rich interactive domain-containing protein 1A [Pteropus alecto]
Length = 2008
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 767 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 825
Query: 61 LRDYE 65
L +E
Sbjct: 826 LYAFE 830
>gi|11320942|gb|AAG33967.1|AF231056_1 BRG1-Associated Factor 250a [Homo sapiens]
Length = 2285
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 1041 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 1099
Query: 61 LRDYE 65
L +E
Sbjct: 1100 LYAFE 1104
>gi|402853529|ref|XP_003891445.1| PREDICTED: AT-rich interactive domain-containing protein 1A [Papio
anubis]
Length = 2069
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 1043 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 1101
Query: 61 LRDYE 65
L +E
Sbjct: 1102 LYAFE 1106
>gi|21264565|ref|NP_006006.3| AT-rich interactive domain-containing protein 1A isoform a [Homo
sapiens]
gi|73920185|sp|O14497.3|ARI1A_HUMAN RecName: Full=AT-rich interactive domain-containing protein 1A;
Short=ARID domain-containing protein 1A; AltName:
Full=B120; AltName: Full=BRG1-associated factor 250;
Short=BAF250; AltName: Full=BRG1-associated factor 250a;
Short=BAF250A; AltName: Full=Osa homolog 1; Short=hOSA1;
AltName: Full=SWI-like protein; AltName: Full=SWI/SNF
complex protein p270; AltName: Full=SWI/SNF-related,
matrix-associated, actin-dependent regulator of chromatin
subfamily F member 1; AltName: Full=hELD
gi|119628200|gb|EAX07795.1| AT rich interactive domain 1A (SWI- like), isoform CRA_c [Homo
sapiens]
gi|119628201|gb|EAX07796.1| AT rich interactive domain 1A (SWI- like), isoform CRA_c [Homo
sapiens]
Length = 2285
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 1041 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 1099
Query: 61 LRDYE 65
L +E
Sbjct: 1100 LYAFE 1104
>gi|410032532|ref|XP_001144752.3| PREDICTED: AT-rich interactive domain-containing protein 1A isoform 1
[Pan troglodytes]
Length = 2068
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 1041 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 1099
Query: 61 LRDYE 65
L +E
Sbjct: 1100 LYAFE 1104
>gi|432915279|ref|XP_004079157.1| PREDICTED: TOX high mobility group box family member 4-A-like
[Oryzias latipes]
Length = 611
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEK 251
K++DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 244 KKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDSLAEDQKQVYKRK 303
Query: 252 ALKDKERYRIEMEDYR 267
K+ Y + Y+
Sbjct: 304 TEAAKKEYLKALAAYK 319
>gi|296470699|tpg|DAA12814.1| TPA: high mobility group box 3-like [Bos taurus]
Length = 197
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 194 RRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKA 252
++DP PK SG+ FF+E + +K +PG ++++ +GE+WN L +S+K +Y K
Sbjct: 84 KKDPNAPKRPPSGFFLFFSEFCSEIKSTNPGISIGDVAKKLGEMWNNLSDSKKQLYVNKD 143
Query: 253 LKDKERYRIEMEDYR 267
K K +Y ++ DY+
Sbjct: 144 AKLK-KYEKDVADYK 157
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 192 IKRRDPAHPKPNRSGYNFF--FAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQ 249
+ + DP PK S + FF + + P P E S+ E W + EK+ +
Sbjct: 1 MAKGDPEKPKGKMSAHAFFVQMCRKKHKKTPKVPVNFAEFSKKCSERWKTMSGKEKSTFD 60
Query: 250 EKALKDKERYRIEMEDY 266
E A DK Y EM+DY
Sbjct: 61 EMAKADKVHYNQEMKDY 77
>gi|410222734|gb|JAA08586.1| AT rich interactive domain 1A (SWI-like) [Pan troglodytes]
gi|410305710|gb|JAA31455.1| AT rich interactive domain 1A (SWI-like) [Pan troglodytes]
Length = 2287
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 1041 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 1099
Query: 61 LRDYE 65
L +E
Sbjct: 1100 LYAFE 1104
>gi|410222732|gb|JAA08585.1| AT rich interactive domain 1A (SWI-like) [Pan troglodytes]
Length = 2286
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 1041 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 1099
Query: 61 LRDYE 65
L +E
Sbjct: 1100 LYAFE 1104
>gi|444706319|gb|ELW47662.1| AT-rich interactive domain-containing protein 1B [Tupaia chinensis]
Length = 1793
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 655 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 713
Query: 61 LRDYE 65
L +E
Sbjct: 714 LYAFE 718
>gi|347921933|ref|NP_990626.2| high mobility group protein B3 [Gallus gallus]
Length = 217
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK S + F +E ++K +PG ++++ +GE+WN L + EK Y KA K
Sbjct: 104 DPNAPKRPPSAFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAK 163
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 164 LKEKYEKDVADYKSKGK 180
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EKA + E A DK RY
Sbjct: 29 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYDR 88
Query: 262 EMEDY 266
EM+DY
Sbjct: 89 EMKDY 93
>gi|297282618|ref|XP_002808326.1| PREDICTED: LOW QUALITY PROTEIN: AT-rich interactive domain-containing
protein 1A-like [Macaca mulatta]
Length = 2224
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 1044 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 1102
Query: 61 LRDYE 65
L +E
Sbjct: 1103 LYAFE 1107
>gi|410032528|ref|XP_513235.4| PREDICTED: AT-rich interactive domain-containing protein 1A isoform 6
[Pan troglodytes]
Length = 2285
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 1041 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 1099
Query: 61 LRDYE 65
L +E
Sbjct: 1100 LYAFE 1104
>gi|329664977|ref|NP_001192714.1| AT-rich interactive domain-containing protein 1A [Bos taurus]
Length = 2286
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 1044 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 1102
Query: 61 LRDYE 65
L +E
Sbjct: 1103 LYAFE 1107
>gi|21264575|ref|NP_624361.1| AT-rich interactive domain-containing protein 1A isoform b [Homo
sapiens]
gi|119628198|gb|EAX07793.1| AT rich interactive domain 1A (SWI- like), isoform CRA_a [Homo
sapiens]
Length = 2068
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 1041 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 1099
Query: 61 LRDYE 65
L +E
Sbjct: 1100 LYAFE 1104
>gi|47228066|emb|CAF97695.1| unnamed protein product [Tetraodon nigroviridis]
Length = 662
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEK 251
K++DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 272 KKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSASFGEVSKIVASMWDSLAEEQKQVYKRK 331
Query: 252 ALKDKERYRIEMEDYR 267
K+ Y + Y+
Sbjct: 332 TEAAKKEYLKALAAYK 347
>gi|395538926|ref|XP_003771425.1| PREDICTED: AT-rich interactive domain-containing protein 2
[Sarcophilus harrisii]
Length = 1766
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 19 TARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLLRDYEQIYFFRSQD 74
TA + ++ +W E+ FNFP + +NA+F L++YY L YE+++ F D
Sbjct: 8 TASAPSPSVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDD 63
>gi|238486744|ref|XP_002374610.1| nucleosome binding protein (Nhp6a), putative [Aspergillus flavus
NRRL3357]
gi|317144043|ref|XP_003189559.1| non-histone chromosomal protein 6 [Aspergillus oryzae RIB40]
gi|220699489|gb|EED55828.1| nucleosome binding protein (Nhp6a), putative [Aspergillus flavus
NRRL3357]
Length = 104
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 191 EIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQ 249
E K++DP PK S Y FF + +++ +PG ++ +M+GE W L E+++ Y+
Sbjct: 16 ERKKKDPNAPKRGLSAYMFFANDNREKVREENPGISFGQVGKMLGEKWKALSEADRRPYE 75
Query: 250 EKALKDKERY 259
+KA DK+RY
Sbjct: 76 DKAAADKKRY 85
>gi|52139164|gb|AAH82554.1| AT rich interactive domain 1A (SWI-like) [Mus musculus]
Length = 1902
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 657 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 715
Query: 61 LRDYE 65
L +E
Sbjct: 716 LYAFE 720
>gi|22597104|gb|AAN03446.1|AF521670_1 SWI/SNF chromatin remodeling complex subunit OSA1 [Homo sapiens]
Length = 1999
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 755 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 813
Query: 61 LRDYE 65
L +E
Sbjct: 814 LYAFE 818
>gi|281351602|gb|EFB27186.1| hypothetical protein PANDA_001156 [Ailuropoda melanoleuca]
Length = 1904
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 662 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 720
Query: 61 LRDYE 65
L +E
Sbjct: 721 LYAFE 725
>gi|253314412|ref|NP_001156579.1| structure specific recognition protein-like [Acyrthosiphon pisum]
Length = 755
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWNKLKESEKAVYQEKALK 254
D PK + Y +F E +K +PG +I++ GELW K+ S+K+ Y+EKA K
Sbjct: 547 DDGRPKRAATAYMIWFNEAREEIKSDNPGISFVDIAKKGGELWKKMSTSDKSKYEEKAAK 606
Query: 255 DKERYRIEMEDYRE 268
KE Y M++++E
Sbjct: 607 SKEEYIEAMKEFKE 620
>gi|327285135|ref|XP_003227290.1| PREDICTED: TOX high mobility group box family member 4-like [Anolis
carolinensis]
Length = 610
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHP-GKDREISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 224 DPNEPQKPVSAYALFFRDTQAAIKGQNPKATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 283
Query: 255 DKERYRIEMEDYRERLKTGQVISDAIP 281
K+ Y + YR+ + V+ A P
Sbjct: 284 AKKEYLKALAAYRDNQECQTVVETAEP 310
>gi|410032530|ref|XP_003949382.1| PREDICTED: AT-rich interactive domain-containing protein 1A [Pan
troglodytes]
Length = 2288
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 1044 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 1102
Query: 61 LRDYE 65
L +E
Sbjct: 1103 LYAFE 1107
>gi|344245847|gb|EGW01951.1| AT-rich interactive domain-containing protein 1A [Cricetulus
griseus]
Length = 1892
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 652 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 710
Query: 61 LRDYE 65
L +E
Sbjct: 711 LYAFE 715
>gi|340520749|gb|EGR50985.1| predicted protein [Trichoderma reesei QM6a]
Length = 83
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 195 RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKAL 253
+DP PK S Y FF EQ ++ +PG ++ +++GE W L + ++A Y+ KA
Sbjct: 2 QDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNDKQRAPYEAKAA 61
Query: 254 KDKERYRIEMEDY 266
DK+RY E + Y
Sbjct: 62 ADKKRYEDEKQAY 74
>gi|115396468|ref|XP_001213873.1| nonhistone chromosomal protein 6A [Aspergillus terreus NIH2624]
gi|114193442|gb|EAU35142.1| nonhistone chromosomal protein 6A [Aspergillus terreus NIH2624]
Length = 101
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALK 254
DP PK S Y FF E +++ +PG ++ +M+GE W L E ++ Y+EKA
Sbjct: 19 DPNAPKRGLSAYMFFANENRDKVREENPGITFGQVGKMLGEKWKALSEDDRRPYEEKAAA 78
Query: 255 DKERYRIEMEDY 266
DK+RY E Y
Sbjct: 79 DKKRYEDEKASY 90
>gi|313217051|emb|CBY38238.1| unnamed protein product [Oikopleura dioica]
Length = 247
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 183 RRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWNKLK 241
R R+ + K++DP P S Y FF E + +K P EIS+++ +W+ L
Sbjct: 137 RLSRKSPKKKKKKDPNEPSRPVSAYALFFRETQSLIKAQKPDATFGEISKIVASMWDALG 196
Query: 242 ESEKAVYQEKALKDKERYRIEMEDYRERL 270
+ EK +Y++K K Y E+ YR L
Sbjct: 197 DEEKTIYKQKTENAKRSYLRELASYRASL 225
>gi|260828085|ref|XP_002608994.1| hypothetical protein BRAFLDRAFT_124005 [Branchiostoma floridae]
gi|229294348|gb|EEN65004.1| hypothetical protein BRAFLDRAFT_124005 [Branchiostoma floridae]
Length = 410
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 188 KKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKA 246
KK + + RD PK +GY + EQ +LK HP E++R++G W+ L + +K
Sbjct: 132 KKRKKETRDSNAPKAPVTGYVLYLTEQREKLKVEHPELPFTEMTRLLGSRWSALSQEDKQ 191
Query: 247 VYQEKALKDKERYRIEMEDYRE 268
Y + A DK RY E++ Y++
Sbjct: 192 KYLDAAEVDKRRYIEELKAYQQ 213
>gi|157817412|ref|NP_001100105.1| AT-rich interactive domain-containing protein 1A [Rattus
norvegicus]
gi|149024190|gb|EDL80687.1| AT rich interactive domain 1A (Swi1 like) (predicted) [Rattus
norvegicus]
Length = 1911
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 659 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 717
Query: 61 LRDYE 65
L +E
Sbjct: 718 LYAFE 722
>gi|451996730|gb|EMD89196.1| hypothetical protein COCHEDRAFT_1107529 [Cochliobolus
heterostrophus C5]
Length = 105
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALK 254
DP PK S Y FF EQ +++ +PG K E+ +++GE W L + ++ Y+ KA
Sbjct: 23 DPNAPKRGLSAYMFFANEQREKVREDNPGIKFGEVGKLLGEKWKALNDKQRQPYEAKAAL 82
Query: 255 DKERYRIEMEDY 266
DK+RY E Y
Sbjct: 83 DKKRYEQEKAAY 94
>gi|395521845|ref|XP_003765025.1| PREDICTED: AT-rich interactive domain-containing protein 1A
[Sarcophilus harrisii]
Length = 1969
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 723 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 781
Query: 61 LRDYE 65
L +E
Sbjct: 782 LYAFE 786
>gi|456753261|gb|JAA74134.1| AT rich interactive domain 1A (SWI-like) tv1 [Sus scrofa]
Length = 1953
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 710 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 768
Query: 61 LRDYE 65
L +E
Sbjct: 769 LYAFE 773
>gi|452823016|gb|EME30030.1| DNA binding / transcription factor [Galdieria sulphuraria]
Length = 579
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIF-NFPSTATNASFVLRKYYQS 59
IP+ GK D + L+ V RGG +K+++ ++W E+ N+ +T+ S+ L++Y++
Sbjct: 483 IPMFRGKPFDFYALYEGVKRRGGFKKVVENKQWPEIWKTMRNYYKESTDHSYQLKRYFEK 542
Query: 60 LLRDYEQIY 68
LR + + Y
Sbjct: 543 YLRRFMEEY 551
>gi|384491850|gb|EIE83046.1| hypothetical protein RO3G_07751 [Rhizopus delemar RA 99-880]
Length = 101
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 188 KKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKA 246
KK+ ++DP+ PK S Y FF +Q +K +P EI +++GE W L E EK
Sbjct: 21 KKARRSKKDPSAPKRGLSAYMFFSQDQRPTVKEENPKASFGEIGKILGERWKALSEEEKK 80
Query: 247 VYQEKALKDKERYRIE 262
Y +KA DK+RY E
Sbjct: 81 PYLKKAEDDKKRYEDE 96
>gi|308499102|ref|XP_003111737.1| CRE-HMG-1.2 protein [Caenorhabditis remanei]
gi|308239646|gb|EFO83598.1| CRE-HMG-1.2 protein [Caenorhabditis remanei]
Length = 238
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 177 AVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHP-GKDREISRMIGE 235
A G R+RK++ ++DP PK S + F+ ++ ++ HP K ++++ +G+
Sbjct: 117 AYGGEDAMRKRKRA---KKDPHAPKRALSAFFFYSQDKRPEIQSAHPDWKVGQVAQELGK 173
Query: 236 LWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLK 271
+W + + K +Y++KA DK+RY EM Y+ ++
Sbjct: 174 MWKLVPQETKDLYEQKAQADKDRYAEEMRHYKSEMQ 209
>gi|14150461|gb|AAK54504.1|AF268912_1 Osa1 nuclear protein [Mus musculus]
Length = 1902
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 657 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 715
Query: 61 LRDYE 65
L +E
Sbjct: 716 LYAFE 720
>gi|68061725|ref|XP_672863.1| high mobility group protein [Plasmodium berghei strain ANKA]
gi|68076125|ref|XP_679982.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56490279|emb|CAI01706.1| high mobility group protein, putative [Plasmodium berghei]
gi|56500842|emb|CAH99000.1| hypothetical protein PB001601.02.0 [Plasmodium berghei]
Length = 98
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREIS---RMIGELWNKLKESEKAVYQEKA 252
DP PK S Y F+ ++ + P +E++ ++IGE W +L ++KA Y++KA
Sbjct: 20 DPLAPKRALSAYMFYVKDKRLEIIQERPELAKEVAQVGKLIGEAWGQLTPAQKAPYEKKA 79
Query: 253 LKDKERYRIEMEDYRE 268
DK RY E+E+YR+
Sbjct: 80 ELDKVRYSKEIEEYRK 95
>gi|355758492|gb|EHH61486.1| hypothetical protein EGM_20831, partial [Macaca fascicularis]
Length = 1906
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 662 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 720
Query: 61 LRDYE 65
L +E
Sbjct: 721 LYAFE 725
>gi|167396118|ref|XP_001741910.1| non-histone chromosomal protein [Entamoeba dispar SAW760]
gi|165893321|gb|EDR21615.1| non-histone chromosomal protein, putative [Entamoeba dispar SAW760]
Length = 111
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 197 PAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALKD 255
P PK +S Y + E A +K HP K EIS++ E W L E EK YQ KA
Sbjct: 23 PNRPKKPQSAYFLYLNEHRASIKEEHPDIKFTEISKVASEQWKALGEEEKKEYQAKADAA 82
Query: 256 KERYRIEMEDY 266
+E+Y+ +ME Y
Sbjct: 83 REQYKKDMEKY 93
>gi|124512426|ref|XP_001349346.1| high mobility group protein [Plasmodium falciparum 3D7]
gi|23499115|emb|CAD51195.1| high mobility group protein [Plasmodium falciparum 3D7]
Length = 99
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHP--GKD-REISRMIGELWNKLKESEKAVYQEKA 252
DP PK S Y F+ ++ + P KD ++ ++IGE W +L ++KA Y++KA
Sbjct: 20 DPLAPKRALSAYMFYVKDKRLEIIKEKPELAKDVAQVGKLIGEAWGQLSPAQKAPYEKKA 79
Query: 253 LKDKERYRIEMEDYRER 269
DK RY E+E+YR++
Sbjct: 80 QLDKVRYSKEIEEYRKK 96
>gi|426222752|ref|XP_004005548.1| PREDICTED: AT-rich interactive domain-containing protein 1A [Ovis
aries]
Length = 1934
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 695 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 753
Query: 61 LRDYE 65
L +E
Sbjct: 754 LYAFE 758
>gi|8489817|gb|AAF75765.1|AF265208_1 SWI-SNF complex protein p270 [Homo sapiens]
Length = 1927
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 683 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 741
Query: 61 LRDYE 65
L +E
Sbjct: 742 LYAFE 746
>gi|390465563|ref|XP_002807024.2| PREDICTED: LOW QUALITY PROTEIN: AT-rich interactive
domain-containing protein 1A, partial [Callithrix
jacchus]
Length = 2024
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 761 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 819
Query: 61 LRDYE 65
L +E
Sbjct: 820 LYAFE 824
>gi|291399519|ref|XP_002716168.1| PREDICTED: AT rich interactive domain 1A [Oryctolagus cuniculus]
Length = 2212
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 969 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 1027
Query: 61 LRDYE 65
L +E
Sbjct: 1028 LYAFE 1032
>gi|290986470|ref|XP_002675947.1| predicted protein [Naegleria gruberi]
gi|284089546|gb|EFC43203.1| predicted protein [Naegleria gruberi]
Length = 215
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 189 KSEIKRRDPAHPKPNRSGYNFFFAEQHARLKP-LHPGKDR---EISRMIGELWNKLKESE 244
K K++DP PK ++G+ F E+ ++K L G+ + E+S+++GE W KL +SE
Sbjct: 4 KKSSKKKDPNAPKRPKTGFFLFCDERREKVKATLGEGEKKSASEVSKLLGEEWGKLTDSE 63
Query: 245 KAVYQEKALKDKERYRIEMEDYRE 268
K Y + K+ E Y+ + E+Y++
Sbjct: 64 KDKYNSVSKKNMEVYKKQFEEYKK 87
>gi|13195757|gb|AAG17549.2|AF219114_1 chromatin remodelling factor p250 [Homo sapiens]
Length = 1939
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 695 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 753
Query: 61 LRDYE 65
L +E
Sbjct: 754 LYAFE 758
>gi|395730950|ref|XP_003780665.1| PREDICTED: LOW QUALITY PROTEIN: AT-rich interactive
domain-containing protein 1A [Pongo abelii]
Length = 2144
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 926 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 984
Query: 61 LRDYE 65
L +E
Sbjct: 985 LYAFE 989
>gi|351697861|gb|EHB00780.1| AT-rich interactive domain-containing protein 1A [Heterocephalus
glaber]
Length = 1990
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 793 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 851
Query: 61 LRDYE 65
L +E
Sbjct: 852 LYAFE 856
>gi|348542680|ref|XP_003458812.1| PREDICTED: TOX high mobility group box family member 4-like
[Oreochromis niloticus]
Length = 667
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 297 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKNEA 356
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + +YR L
Sbjct: 357 AKKDYLKALAEYRASL 372
>gi|301755052|ref|XP_002913404.1| PREDICTED: AT-rich interactive domain-containing protein 1A-like
[Ailuropoda melanoleuca]
Length = 1983
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 741 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 799
Query: 61 LRDYE 65
L +E
Sbjct: 800 LYAFE 804
>gi|417515629|gb|JAA53631.1| AT-rich interactive domain-containing protein 1A isoform a, partial
[Sus scrofa]
Length = 1911
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 668 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 726
Query: 61 LRDYE 65
L +E
Sbjct: 727 LYAFE 731
>gi|397476267|ref|XP_003846154.1| PREDICTED: LOW QUALITY PROTEIN: AT-rich interactive
domain-containing protein 1A, partial [Pan paniscus]
Length = 2057
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 812 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 870
Query: 61 LRDYE 65
L +E
Sbjct: 871 LYAFE 875
>gi|296490111|tpg|DAA32224.1| TPA: AT rich interactive domain 1A-like [Bos taurus]
Length = 2092
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 850 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 908
Query: 61 LRDYE 65
L +E
Sbjct: 909 LYAFE 913
>gi|403257395|ref|XP_003921305.1| PREDICTED: AT-rich interactive domain-containing protein 1A
[Saimiri boliviensis boliviensis]
Length = 1682
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 657 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 715
Query: 61 LRDYE 65
L +E
Sbjct: 716 LYAFE 720
>gi|354492435|ref|XP_003508354.1| PREDICTED: AT-rich interactive domain-containing protein 1A
[Cricetulus griseus]
Length = 2087
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 848 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 906
Query: 61 LRDYE 65
L +E
Sbjct: 907 LYAFE 911
>gi|441671986|ref|XP_004093174.1| PREDICTED: LOW QUALITY PROTEIN: AT-rich interactive
domain-containing protein 1A [Nomascus leucogenys]
Length = 1843
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 710 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 768
Query: 61 LRDYE 65
L +E
Sbjct: 769 LYAFE 773
>gi|332206942|ref|XP_003252554.1| PREDICTED: AT-rich interactive domain-containing protein 2
[Nomascus leucogenys]
Length = 1964
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 26 KIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLLRDYEQIYFFRSQD 74
++ ++ +W E+ FNFP + +NA+F L++YY L YE+++ F D
Sbjct: 189 QVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDD 237
>gi|410966438|ref|XP_003989740.1| PREDICTED: AT-rich interactive domain-containing protein 1A [Felis
catus]
Length = 1683
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 658 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 716
Query: 61 LRDYE 65
L +E
Sbjct: 717 LYAFE 721
>gi|348570742|ref|XP_003471156.1| PREDICTED: AT-rich interactive domain-containing protein 1A [Cavia
porcellus]
Length = 1973
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 725 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 783
Query: 61 LRDYE 65
L +E
Sbjct: 784 LYAFE 788
>gi|109482813|ref|XP_001059099.1| PREDICTED: AT-rich interactive domain-containing protein 2 [Rattus
norvegicus]
Length = 1847
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 25 EKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLLRDYEQIYFFRSQD 74
+ + ++ +W E+ FNFP + +NA+F L++YY L YE+++ F D
Sbjct: 82 QPVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDD 131
>gi|14150463|gb|AAK54505.1|AF268913_1 OSA1 nuclear protein [Homo sapiens]
Length = 1685
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 658 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 716
Query: 61 LRDYE 65
L +E
Sbjct: 717 LYAFE 721
>gi|440905964|gb|ELR56280.1| AT-rich interactive domain-containing protein 1A [Bos grunniens
mutus]
Length = 1906
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 658 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 716
Query: 61 LRDYE 65
L +E
Sbjct: 717 LYAFE 721
>gi|109096289|ref|XP_001092151.1| PREDICTED: AT-rich interactive domain-containing protein 2 [Macaca
mulatta]
Length = 1905
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 26 KIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLLRDYEQIYFFRSQD 74
++ ++ +W E+ FNFP + +NA+F L++YY L YE+++ F D
Sbjct: 131 QVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDD 179
>gi|426328508|ref|XP_004025294.1| PREDICTED: AT-rich interactive domain-containing protein 1A
[Gorilla gorilla gorilla]
Length = 1685
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 658 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 716
Query: 61 LRDYE 65
L +E
Sbjct: 717 LYAFE 721
>gi|213515010|ref|NP_001133971.1| High mobility group protein B3 [Salmo salar]
gi|209156012|gb|ACI34238.1| High mobility group protein B3 [Salmo salar]
gi|223648118|gb|ACN10817.1| High mobility group protein B3 [Salmo salar]
Length = 206
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 168 INNNNATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD- 226
+ +N H G ++ R++ DP PK SG+ F A+ ++K HP
Sbjct: 69 VRYDNEMMHFAPGGKKGRKK--------DPNAPKRPSSGFFIFCADHRPKIKAQHPSLGI 120
Query: 227 REISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYR 267
++++ +GE WN L ++ K Y KA K K++Y+ ++ DY+
Sbjct: 121 GDVAKKLGEQWNNLTDATKQPYLIKANKLKDKYQKDVADYK 161
>gi|440800724|gb|ELR21759.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 128
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWNKLKESEKAVYQEKALK 254
DP PK ++GY FF AE+ ++K +P +I++ + W + E EK Y A K
Sbjct: 28 DPNAPKRPKTGYIFFSAEERVKVKEDNPDLGFGDITKQVSAKWKDMSEEEKEPYLTLAKK 87
Query: 255 DKERYRIEMEDYR 267
DKERY EM Y+
Sbjct: 88 DKERYEKEMSKYK 100
>gi|444515932|gb|ELV11007.1| High mobility group protein B3 [Tupaia chinensis]
Length = 212
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ SG+ F +E H ++K +PG ++++ + E+WN +SEK Y KA K
Sbjct: 89 DPNAPERPPSGFLLFCSEFHLKIKSTNPGISIGDVAKKLVEMWNNFSDSEKQPYITKAAK 148
Query: 255 DKERYRIEMEDYRER 269
KE+Y+ ++ +Y+ +
Sbjct: 149 LKEKYKKDVANYKSK 163
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 192 IKRRDPAHPKPNRSGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVY 248
+ + DP PK S Y FF E+H + P P E S+ + W + EK+ +
Sbjct: 1 MAKSDPKKPKGKVSTYAFFVQTCREEHKKKNPEVPINFTEFSKKCSKRWKTMSGKEKSKF 60
Query: 249 QEKALKDKERYRIEMEDY 266
E A DK RY EM+DY
Sbjct: 61 DEMAKADKIRYDWEMKDY 78
>gi|17553928|ref|NP_498375.1| Protein HMG-1.2, isoform a [Caenorhabditis elegans]
gi|21903502|sp|Q09390.2|HMG12_CAEEL RecName: Full=High mobility group protein 1.2
gi|3702828|gb|AAC78599.1| high mobility group protein 1.2 [Caenorhabditis elegans]
gi|373219052|emb|CCD83369.1| Protein HMG-1.2, isoform a [Caenorhabditis elegans]
Length = 235
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 177 AVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGE 235
A G R+RK++ ++DP PK S + F+ ++ ++ HP K ++++ +G+
Sbjct: 115 AYGGEDAMRKRKRA---KKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGK 171
Query: 236 LWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLK 271
+W + + K +Y++KA DK+RY EM +Y+ ++
Sbjct: 172 MWKLVPQETKDMYEQKAQADKDRYADEMRNYKAEMQ 207
>gi|354498260|ref|XP_003511233.1| PREDICTED: AT-rich interactive domain-containing protein 2-like
[Cricetulus griseus]
Length = 1890
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 26 KIIKER-RWKEVTAIFNFPSTATNASFVLRKYYQSLLRDYEQIYFFRSQD 74
+++ E+ +W E+ FNFP + +NA+F L++YY L YE+++ F D
Sbjct: 123 RLVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDD 172
>gi|71986268|ref|NP_001022599.1| Protein HMG-1.2, isoform b [Caenorhabditis elegans]
gi|373219053|emb|CCD83370.1| Protein HMG-1.2, isoform b [Caenorhabditis elegans]
Length = 234
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 177 AVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGE 235
A G R+RK++ ++DP PK S + F+ ++ ++ HP K ++++ +G+
Sbjct: 114 AYGGEDAMRKRKRA---KKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGK 170
Query: 236 LWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLK 271
+W + + K +Y++KA DK+RY EM +Y+ ++
Sbjct: 171 MWKLVPQETKDMYEQKAQADKDRYADEMRNYKAEMQ 206
>gi|403301730|ref|XP_003941536.1| PREDICTED: AT-rich interactive domain-containing protein 2
[Saimiri boliviensis boliviensis]
Length = 1807
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 26 KIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLLRDYEQIYFFRSQD 74
++ ++ +W E+ FNFP + +NA+F L++YY L YE+++ F D
Sbjct: 33 QVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDD 81
>gi|224071864|ref|XP_002303585.1| jumonji domain protein [Populus trichocarpa]
gi|222841017|gb|EEE78564.1| jumonji domain protein [Populus trichocarpa]
Length = 1503
Score = 48.5 bits (114), Expect = 0.005, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 3 IIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATN-ASFVLRKYYQSLL 61
I G ELDL +LF V GG +K++KE++W EV+ T A VL + YQ L
Sbjct: 133 IFEGDELDLCKLFNGVKRFGGYDKVVKEKKWGEVSRFVRSGRKITECAKHVLCQLYQEHL 192
Query: 62 RDYEQIY 68
DYE+ Y
Sbjct: 193 YDYEEYY 199
>gi|260806967|ref|XP_002598355.1| hypothetical protein BRAFLDRAFT_57556 [Branchiostoma floridae]
gi|229283627|gb|EEN54367.1| hypothetical protein BRAFLDRAFT_57556 [Branchiostoma floridae]
Length = 223
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 52/85 (61%), Gaps = 6/85 (7%)
Query: 184 RRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKE 242
RR+RKK +DP PK S + + A+ +++ HP + EI++++G W ++ +
Sbjct: 88 RRKRKK-----KDPNAPKRAMSAFFMYCADARPKVRAAHPDFQVGEIAKILGRQWKEISD 142
Query: 243 SEKAVYQEKALKDKERYRIEMEDYR 267
S+KA Y++KA +K RY+ E+ +Y+
Sbjct: 143 SDKAKYEKKAQTEKARYQKELAEYK 167
>gi|296211402|ref|XP_002752404.1| PREDICTED: AT-rich interactive domain-containing protein 2
[Callithrix jacchus]
Length = 1852
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 26 KIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLLRDYEQIYFFRSQD 74
++ ++ +W E+ FNFP + +NA+F L++YY L YE+++ F D
Sbjct: 78 QVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDD 126
>gi|223993083|ref|XP_002286225.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977540|gb|EED95866.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 72
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHP-GKDREISRMIGELWNKLKESEKAVYQEKALK 254
DP PK + +N F +++ +K +P E+++++G + L ESE+A Y E + +
Sbjct: 1 DPNAPKQPLTAFNIFVSQKRIDVKAANPQATFGELAKLVGLAFKGLNESERAKYDELSRQ 60
Query: 255 DKERYRIEMEDY 266
DKERY EME Y
Sbjct: 61 DKERYTKEMESY 72
>gi|401406436|ref|XP_003882667.1| Zgc:123215, related [Neospora caninum Liverpool]
gi|325117083|emb|CBZ52635.1| Zgc:123215, related [Neospora caninum Liverpool]
Length = 98
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHP---GKDREISRMIGELWNKLKESEKAVYQEKA 252
DP P+ S + FF E+ + HP + ++ +M+GE W KL E+ ++EKA
Sbjct: 21 DPNAPRRALSAFMFFAKEKRTEIVAAHPELKSQMTKVGKMVGEAWGKLTPEERKPFEEKA 80
Query: 253 LKDKERYRIEMEDYRER 269
+DK RY E +++ ++
Sbjct: 81 AQDKARYLTEKQEFEQK 97
>gi|71986275|ref|NP_001022600.1| Protein HMG-1.2, isoform c [Caenorhabditis elegans]
gi|373219054|emb|CCD83371.1| Protein HMG-1.2, isoform c [Caenorhabditis elegans]
Length = 233
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 173 ATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISR 231
A A G R+RK++ ++DP PK S + F+ ++ ++ HP K ++++
Sbjct: 109 AEVAAYGGEDAMRKRKRA---KKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQ 165
Query: 232 MIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLK 271
+G++W + + K +Y++KA DK+RY EM +Y+ ++
Sbjct: 166 ELGKMWKLVPQETKDMYEQKAQADKDRYADEMRNYKAEMQ 205
>gi|82753906|ref|XP_727864.1| high mobility group protein [Plasmodium yoelii yoelii 17XNL]
gi|23483924|gb|EAA19429.1| high mobility group protein [Plasmodium yoelii yoelii]
Length = 126
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREIS---RMIGELWNKLKESEKAVYQEKA 252
DP PK S Y F+ ++ + P +E++ ++IGE W +L ++KA Y++KA
Sbjct: 48 DPLAPKRALSAYMFYVKDKRLEIIQERPELAKEVAQVGKLIGEAWGQLTPAQKAPYEKKA 107
Query: 253 LKDKERYRIEMEDYRE 268
DK RY E+E+YR+
Sbjct: 108 ELDKVRYSKEIEEYRK 123
>gi|82658290|ref|NP_001032501.1| high mobility group protein B2 [Danio rerio]
gi|81294190|gb|AAI07992.1| Zgc:123215 [Danio rerio]
Length = 213
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK S + F ++ ++K +PG +I++ +GE+W+KL EK+ Y++KA+K
Sbjct: 91 DPNAPKRPPSAFFVFCSDHRPKVKGDNPGISIGDIAKKLGEMWSKLSPKEKSPYEQKAMK 150
Query: 255 DKERYRIEMEDYRER 269
KE+Y ++ YR +
Sbjct: 151 LKEKYEKDVAAYRAK 165
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 195 RDPAHPKPNRSGYNFF---FAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEK 251
+DP P+ S Y FF E+H + P E S+ E W + EK ++E
Sbjct: 3 KDPNKPRGKTSSYAFFVQTCREEHKKKNPGTSVNFSEFSKKCSERWRTMSSKEKGKFEEM 62
Query: 252 ALKDKERYRIEMEDY 266
A DK RY EM++Y
Sbjct: 63 AKTDKVRYDREMKNY 77
>gi|328772971|gb|EGF83008.1| hypothetical protein BATDEDRAFT_85702 [Batrachochytrium
dendrobatidis JAM81]
Length = 1614
Score = 48.5 bits (114), Expect = 0.006, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+PI+ K L++H LF+ V GG+EK+ + W+ ++ + T N +LRK+Y S
Sbjct: 746 VPILASKPLNMHALFLAVVEAGGMEKLSAKAAWRPISKKLGY-DTQPNVPSLLRKHYTSH 804
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAVLPE 112
L +EQ F STN + + P+P +Q ++ ++ P+
Sbjct: 805 LYPFEQFLFPSLT------STNPDANRKSVTPTP-LQKTIKSKTMSMHSTPD 849
>gi|398406589|ref|XP_003854760.1| HMGB family protein [Zymoseptoria tritici IPO323]
gi|339474644|gb|EGP89736.1| HMGB family protein [Zymoseptoria tritici IPO323]
Length = 111
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 197 PAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALKD 255
P PK S Y FF EQ ++ +PG K E+ +++GE W L E +K Y+ KA D
Sbjct: 26 PNMPKRGLSAYMFFANEQRDNVREENPGIKFGEVGKLLGERWKGLNEKQKTPYEAKAAAD 85
Query: 256 KERYRIEMEDY 266
K+RY E + Y
Sbjct: 86 KKRYEEEKKAY 96
>gi|350585782|ref|XP_003127781.3| PREDICTED: AT-rich interactive domain-containing protein 1A,
partial [Sus scrofa]
Length = 1499
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 515 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 573
Query: 61 LRDYE 65
L +E
Sbjct: 574 LYAFE 578
>gi|354471653|ref|XP_003498055.1| PREDICTED: TOX high mobility group box family member 3-like
[Cricetulus griseus]
Length = 544
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 215 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 274
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 275 AKKEYLKALAAYRASL 290
>gi|296810682|ref|XP_002845679.1| non-histone chromosomal protein 6 [Arthroderma otae CBS 113480]
gi|238843067|gb|EEQ32729.1| non-histone chromosomal protein 6 [Arthroderma otae CBS 113480]
Length = 103
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 191 EIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQ 249
E K++DP PK S Y F EQ A ++ +P ++ +++GE W L + ++ Y+
Sbjct: 17 EKKKKDPNAPKRGLSAYMIFANEQRAAVREENPNITFGQVGKVLGERWKALSDKQRVPYE 76
Query: 250 EKALKDKERYRIEMEDYRER 269
EKA DK+RY E Y R
Sbjct: 77 EKAATDKQRYEDEKAAYNSR 96
>gi|397640346|gb|EJK74071.1| hypothetical protein THAOC_04277 [Thalassiosira oceanica]
Length = 337
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 175 AHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHAR-LKPLH--PGKDREISR 231
H +G R + + KR+DP PK RS Y FF +E+ + LK + P K +I
Sbjct: 183 GHDSNGWLLESSRSRKQKKRKDPNLPKRPRSSYVFFTSEERPKILKEFNDPPLKFTDIGY 242
Query: 232 MIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRER 269
++GE W +LK + Y+ A DK R+ EM++Y++R
Sbjct: 243 ILGERWRELKPERRKKYEGMAEGDKLRHEREMKEYKKR 280
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 162 PSSYNVINNNNATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPL 221
P Y+ N+ A + R RR K++ RDP P+ N S Y FF E+ +
Sbjct: 81 PPGYDSRGNSMAGS-----FSNRARRSKAD---RDPRAPRKNISAYLFFQNEKRSEFAAE 132
Query: 222 HPGKD-REISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDY 266
+PG + E++R +++ L + E+ V++EKA +DK RY E Y
Sbjct: 133 NPGMEFGELTRFTSRMYHSLPKEERKVWEEKAKQDKVRYESEKGKY 178
>gi|296418046|ref|XP_002838655.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634611|emb|CAZ82846.1| unnamed protein product [Tuber melanosporum]
Length = 103
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEK 251
K++DP PK S Y FF EQ ++ +PG ++ +++GE W L E ++ Y+ K
Sbjct: 16 KKKDPNAPKRGLSAYMFFANEQRENVRNDNPGIAFGQVGKVLGERWKALSEKQRQPYEAK 75
Query: 252 ALKDKERYRIEMEDY 266
A DK+RY E Y
Sbjct: 76 AAADKKRYEDEKAAY 90
>gi|403222987|dbj|BAM41118.1| high-mobility-group protein [Theileria orientalis strain Shintoku]
Length = 93
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 188 KKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREIS---RMIGELWNKLKESE 244
KK + ++DP PK S Y FF E+ L +P ++++ +++G WN L +SE
Sbjct: 10 KKGKRTKKDPNAPKRALSSYMFFAKEKRNELIKENPDLAKDVATVGKLVGAAWNSLDDSE 69
Query: 245 KAVYQEKALKDKERYRIEMEDYRE 268
KA Y++ A D+ERY E +Y++
Sbjct: 70 KAPYEKLAEADRERYEREKLEYQK 93
>gi|225195621|gb|ACN82088.1| high-mobility group box 1 [Carassius auratus x Megalobrama
amblycephala]
Length = 193
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 189 KSEIKRR--DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEK 245
K E K+R DP PK S + F AE ++K PG ++++ +GE+WNK EK
Sbjct: 70 KGEKKKRFKDPNAPKRPPSAFFIFCAEFRPKVKEETPGLSIGDVAKKLGEMWNKTSSEEK 129
Query: 246 AVYQEKALKDKERYRIEMEDYRERLKTG 273
Y++KA + KE+Y ++ YR + K G
Sbjct: 130 QPYEKKAARLKEKYEKDITAYRSKGKVG 157
>gi|350585032|ref|XP_003127034.3| PREDICTED: TOX high mobility group box family member 3 [Sus scrofa]
Length = 578
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 258 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 317
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 318 AKKEYLKALAAYRASL 333
>gi|410975149|ref|XP_003993997.1| PREDICTED: transcription factor A, mitochondrial [Felis catus]
Length = 246
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 181 VQRRRRRKKSEIKRRDPA---HPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELW 237
+Q++R +KK+ IK+R+ PK RS YN + AE R + G + + I E W
Sbjct: 133 IQQKRLKKKALIKKRELTMLGKPKRPRSAYNIYIAE---RFQEHKDGTSQVKLKTINENW 189
Query: 238 NKLKESEKAVYQEKALKDKERYRIEMEDYRERL 270
L S+K VY + A DK RY EM+ + E++
Sbjct: 190 KNLSSSQKQVYIQLANDDKIRYYNEMKSWEEQM 222
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 198 AHPKPNRSGYNFFFAEQHARLKPLHP-GKDREISRMIGELWNKLKESEKAVYQEKALKDK 256
++PK + Y F EQ K +P K+ E+ R I +LW +L +SEK +Y++ D
Sbjct: 48 SYPKKPLTSYVRFSKEQLPIFKAQNPDAKNSELIRKIAQLWRELPDSEKKIYEDAYRADW 107
Query: 257 ERYRIEMEDYRERLKTGQVISDAIPLQQR 285
+ Y+ E+ +E+L Q++S +QQ+
Sbjct: 108 QAYKEEINRIQEQLTPSQIVSLEKEIQQK 136
>gi|344266737|ref|XP_003405436.1| PREDICTED: AT-rich interactive domain-containing protein 2-like
[Loxodonta africana]
Length = 2367
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 27 IIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLLRDYEQIYFFRSQD 74
+ ++ +W E+ FNFP + +NA+F L++YY L YE+++ F D
Sbjct: 593 VSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDD 640
>gi|340383933|ref|XP_003390470.1| PREDICTED: FACT complex subunit SSRP1-like, partial [Amphimedon
queenslandica]
Length = 410
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK S Y + E LK HP E+S+ G+LW +LK+ K+ ++EKA K
Sbjct: 277 DPNCPKKPLSSYMLWLQEMRPSLKKKHPELSITEMSKKAGQLWKELKD--KSKWEEKAKK 334
Query: 255 DKERYRIEMEDY 266
KE+Y I+M++Y
Sbjct: 335 LKEQYLIDMKEY 346
>gi|167536391|ref|XP_001749867.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771582|gb|EDQ85246.1| predicted protein [Monosiga brevicollis MX1]
Length = 197
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 184 RRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWNKLKE 242
R++R + + ++DP PK +S Y FF + + +P K ++S++IG W ++ +
Sbjct: 22 RQKRPRQKRAKKDPNKPKNAQSAYMFFSQKVRPQFSKDNPDKKMTDVSKLIGAAWREMSD 81
Query: 243 SEKAVYQEKALKDKERYRIEMEDY 266
+ K Y+E A +DK+RY+ +M Y
Sbjct: 82 AAKKPYEEMARRDKQRYQHQMATY 105
>gi|395841720|ref|XP_003793681.1| PREDICTED: AT-rich interactive domain-containing protein 2
[Otolemur garnettii]
Length = 1819
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 26 KIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLLRDYEQIYFFRSQD 74
++ ++ +W E+ FNFP + +NA+F L++YY L YE+++ F D
Sbjct: 52 EVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDD 100
>gi|219119941|ref|XP_002180721.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408194|gb|EEC48129.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 90
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 181 VQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNK 239
++ R RK+++ +DPA PK Y FF E ++ PG K ++ +++GE W
Sbjct: 2 IEDHRPRKRNKRGPKDPAAPKRASGAYVFFTNEMRPKVLQEFPGIKFVDLGKVLGERWRA 61
Query: 240 LKESEKAVYQEKALKDKERYRIEMEDY 266
L EK ++E A +DK R+++EM+ Y
Sbjct: 62 LTPEEKKRFEEVATEDKIRFQMEMQQY 88
>gi|194208591|ref|XP_001492381.2| PREDICTED: TOX high mobility group box family member 3 [Equus
caballus]
Length = 559
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 235 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 294
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 295 AKKEYLKALAAYRASL 310
>gi|440298682|gb|ELP91313.1| hypothetical protein EIN_153200 [Entamoeba invadens IP1]
Length = 185
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALK 254
DP PK ++ Y + E A +K P K E+++ GE W + E +K YQ+KA K
Sbjct: 96 DPNKPKKPQTAYMLYLNEHRAEIKEKFPDMKVTEVAKKAGENWKAMGEEDKKPYQDKADK 155
Query: 255 DKERYRIEMEDYRER 269
KE ++ EM+ Y E+
Sbjct: 156 AKETWKTEMKKYEEK 170
>gi|326927243|ref|XP_003209802.1| PREDICTED: TOX high mobility group box family member 3-like
[Meleagris gallopavo]
Length = 573
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 249 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 308
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 309 AKKEYLKALAAYRASL 324
>gi|258563818|ref|XP_002582654.1| nonhistone chromosomal protein 6A [Uncinocarpus reesii 1704]
gi|237908161|gb|EEP82562.1| nonhistone chromosomal protein 6A [Uncinocarpus reesii 1704]
Length = 115
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 197 PAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALKD 255
P PK S Y FF EQ ++ +PG ++ +++GE W L + ++A Y+EKA D
Sbjct: 22 PNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALSDKQRAPYEEKAAAD 81
Query: 256 KERYRIEMEDY 266
K+RY E Y
Sbjct: 82 KKRYEDEKASY 92
>gi|428671805|gb|EKX72720.1| high mobility group protein, putative [Babesia equi]
Length = 94
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 194 RRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREIS---RMIGELWNKLKESEKAVYQE 250
++DP PK S Y FF E+ A + +P ++++ R+IG WN L E EKA +++
Sbjct: 17 KKDPNAPKRALSSYMFFAKEKRAEIIAENPELAKDVASVGRLIGAAWNALDEKEKAPFEK 76
Query: 251 KALKDKERYRIEMEDY 266
A +DK RY E +Y
Sbjct: 77 LAEEDKARYEKEKAEY 92
>gi|426255984|ref|XP_004021627.1| PREDICTED: transcription factor A, mitochondrial-like [Ovis aries]
Length = 246
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 181 VQRRRRRKKSEIKRRDP---AHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELW 237
+ ++R +KK+ IK+R+ PK RS YN F AE R + G + + I E W
Sbjct: 133 IMQKRLKKKALIKKRELTMLGKPKRPRSAYNIFIAE---RFQETKDGTSQVKLKAINENW 189
Query: 238 NKLKESEKAVYQEKALKDKERYRIEMEDYRERL 270
L S+K VY + A DK RY EM+ + E++
Sbjct: 190 KNLSNSQKQVYIQLAKDDKIRYYNEMKSWEEQM 222
Score = 41.2 bits (95), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 199 HPKPNRSGYNFFFAEQHARLKPLHP-GKDREISRMIGELWNKLKESEKAVYQEKALKDKE 257
+PK + Y F EQ K +P K+ E+ + I +LW +L +SEK +Y++ D +
Sbjct: 49 YPKKPMTSYVRFSKEQLPIFKAQNPDAKNSELIKKIAKLWRELPDSEKKIYEDAYRADWQ 108
Query: 258 RYRIEMEDYRERLKTGQVIS-DAIPLQQRL 286
Y+ E+ +E+L Q++S + +Q+RL
Sbjct: 109 VYKEEINRIQEQLTPSQIVSLEKEIMQKRL 138
>gi|189205162|ref|XP_001938916.1| non-histone chromosomal protein 6 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330923152|ref|XP_003300124.1| hypothetical protein PTT_11280 [Pyrenophora teres f. teres 0-1]
gi|187986015|gb|EDU51503.1| non-histone chromosomal protein 6 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311325919|gb|EFQ91802.1| hypothetical protein PTT_11280 [Pyrenophora teres f. teres 0-1]
Length = 106
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 197 PAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALKD 255
P PK S Y FF EQ +++ +PG K E+ +++GE W L E ++ Y+ KA D
Sbjct: 25 PNAPKRGLSAYMFFANEQREKVREDNPGIKFGEVGKLLGEKWKALNEKQRTPYEAKAAAD 84
Query: 256 KERYRIEMEDYR 267
K+RY E Y+
Sbjct: 85 KKRYEEEKAAYQ 96
>gi|402908366|ref|XP_003916917.1| PREDICTED: TOX high mobility group box family member 3 [Papio
anubis]
Length = 556
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 215 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 274
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 275 AKKEYLKALAAYRASL 290
>gi|410983521|ref|XP_003998087.1| PREDICTED: TOX high mobility group box family member 3 [Felis
catus]
Length = 561
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 249 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 308
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 309 AKKEYLKALAAYRASL 324
>gi|384497898|gb|EIE88389.1| hypothetical protein RO3G_13100 [Rhizopus delemar RA 99-880]
Length = 1246
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFP-STATNASFVLRKYYQS 59
+P + + +DL+RL EV +RGGI+ + K++RW E+ I F T+ S L+ Y
Sbjct: 130 VPQLDKRPIDLYRLKNEVASRGGIQVVTKQKRWAEIGRIMGFGRKNCTSMSNALKSAYHK 189
Query: 60 LLRDYEQIY 68
++ YE Y
Sbjct: 190 IILPYEIWY 198
>gi|291392403|ref|XP_002712720.1| PREDICTED: AT rich interactive domain 2 (ARID, RFX-like)
[Oryctolagus cuniculus]
Length = 1837
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 29 KERRWKEVTAIFNFPSTATNASFVLRKYYQSLLRDYEQIYFFRSQD 74
++ +W E+ FNFP + +NA+F L++YY L YE+++ F D
Sbjct: 68 EKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDD 113
>gi|157820243|ref|NP_001099641.1| TOX high mobility group box family member 3 [Rattus norvegicus]
gi|149032667|gb|EDL87537.1| trinucleotide repeat containing 9 (predicted) [Rattus norvegicus]
Length = 543
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 214 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 273
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 274 AKKEYLKALAAYRASL 289
>gi|449488871|ref|XP_004174432.1| PREDICTED: LOW QUALITY PROTEIN: AT-rich interactive
domain-containing protein 1A [Taeniopygia guttata]
Length = 1896
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL++ V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 667 LPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 725
Query: 61 LRDYE 65
L +E
Sbjct: 726 LYAFE 730
>gi|355784552|gb|EHH65403.1| hypothetical protein EGM_02155, partial [Macaca fascicularis]
Length = 116
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEK 251
K DP PK SG+ F +E H ++K +PG ++++ +GE+WN L +SEK Y K
Sbjct: 23 KNNDPNAPKRPLSGFFLFCSEFHPKMKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITK 82
Query: 252 ALKDKERYRIEMEDYRERLK 271
+Y ++ DY+ + K
Sbjct: 83 ------KYEKDVADYKSKGK 96
>gi|241752334|ref|XP_002401049.1| conserved hypothetical protein [Ixodes scapularis]
gi|215508304|gb|EEC17758.1| conserved hypothetical protein [Ixodes scapularis]
Length = 133
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKA 252
DP+ P+ +G+ F + LHPGKD R IS M+G+ W K+K EK +Y ++A
Sbjct: 51 DPSKPRRPMNGFMLFAQKHRGEYSHLHPGKDNRAISVMLGDQWRKMKSEEKKMYSQEA 108
>gi|46394418|gb|AAS91553.1| AmphiHMG1/2 [Branchiostoma belcheri tsingtauense]
Length = 222
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 53/85 (62%), Gaps = 6/85 (7%)
Query: 184 RRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKE 242
RR+RKK +DP PK S + + A+ +++ HP + +I++++G+ W ++ +
Sbjct: 87 RRKRKK-----KDPNAPKRAMSAFFMYCADARPKVRAAHPDFQVGDIAKILGKQWKEISD 141
Query: 243 SEKAVYQEKALKDKERYRIEMEDYR 267
S+KA Y++KA +K RY+ E+ +Y+
Sbjct: 142 SDKAKYEKKAQTEKARYQKELAEYK 166
>gi|355756773|gb|EHH60381.1| hypothetical protein EGM_11729 [Macaca fascicularis]
Length = 543
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 215 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 274
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 275 AKKEYLKALAAYRASL 290
>gi|332267288|ref|XP_003282615.1| PREDICTED: high mobility group protein B3-like, partial [Nomascus
leucogenys]
Length = 103
Score = 48.1 bits (113), Expect = 0.007, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 205 SGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALKDKERYRIEM 263
SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y KA K KE+Y ++
Sbjct: 1 SGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDV 60
Query: 264 EDYRERLK 271
DY+ + K
Sbjct: 61 ADYKSKGK 68
>gi|348580727|ref|XP_003476130.1| PREDICTED: AT-rich interactive domain-containing protein 2-like
[Cavia porcellus]
Length = 1784
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 27 IIKERRWKEVTAIFNFPSTATNASFVLRKYYQSLLRDYEQIYFFRSQD 74
+ ++ +W E+ FNFP + +NA+F L++YY L YE+++ F D
Sbjct: 16 VSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDD 63
>gi|332227697|ref|XP_003263029.1| PREDICTED: TOX high mobility group box family member 3 [Nomascus
leucogenys]
Length = 483
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 159 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 218
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 219 AKKEYLKALAAYRASL 234
>gi|148679118|gb|EDL11065.1| trinucleotide repeat containing 9 [Mus musculus]
Length = 574
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 249 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 308
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 309 AKKEYLKALAAYRASL 324
>gi|363742215|ref|XP_417693.3| PREDICTED: AT-rich interactive domain-containing protein 1A [Gallus
gallus]
Length = 1737
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL+RL++ V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 506 LPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 564
Query: 61 LRDYE 65
L +E
Sbjct: 565 LYAFE 569
>gi|355710193|gb|EHH31657.1| hypothetical protein EGK_12773 [Macaca mulatta]
Length = 541
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 215 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 274
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 275 AKKEYLKALAAYRASL 290
>gi|170932534|ref|NP_766501.2| TOX high mobility group box family member 3 [Mus musculus]
gi|81873298|sp|Q80W03.1|TOX3_MOUSE RecName: Full=TOX high mobility group box family member 3; AltName:
Full=Trinucleotide repeat-containing gene 9 protein
gi|30705097|gb|AAH52044.1| TOX high mobility group box family member 3 [Mus musculus]
Length = 575
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 250 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 309
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 310 AKKEYLKALAAYRASL 325
>gi|26349811|dbj|BAC38545.1| unnamed protein product [Mus musculus]
Length = 575
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 250 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 309
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 310 AKKEYLKALAAYRASL 325
>gi|341879743|gb|EGT35678.1| CBN-HMG-1.2 protein [Caenorhabditis brenneri]
Length = 235
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 177 AVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHP-GKDREISRMIGE 235
A G R+RK++ ++DP PK S + F+ ++ ++ HP K ++++ +G+
Sbjct: 115 AYGGEDAMRKRKRA---KKDPHAPKRALSAFFFYSQDKRPEIQSAHPDWKVGQVAQELGK 171
Query: 236 LWNKLKESEKAVYQEKALKDKERYRIEMEDYRERL 270
+W ++ + K Y+ KA DK+RY EM +Y+ +
Sbjct: 172 MWKQVSQELKDSYEAKAQADKDRYADEMRNYKSEM 206
>gi|344228278|gb|EGV60164.1| hypothetical protein CANTEDRAFT_110112 [Candida tenuis ATCC 10573]
Length = 89
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 187 RKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEK 245
RKK+ K++DP PK + S Y FF + ++ +PG ++ R++GE W L EK
Sbjct: 4 RKKAVRKKKDPDAPKRSLSAYMFFANDNRDIVRAENPGIAFGQVGRLLGERWKALTADEK 63
Query: 246 AVYQEKALKDKERYRIEMEDY 266
Y++KA DK+RY + +Y
Sbjct: 64 IPYEKKANDDKKRYEKQKAEY 84
>gi|401415962|ref|XP_003872476.1| high mobility group protein homolog tdp-1,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322488700|emb|CBZ23947.1| high mobility group protein homolog tdp-1,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 300
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 179 SGVQRRRRRKKSEIKRRDPA-HPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGEL 236
SG ++ + ++ + K + P +PK S Y F E +LK HP K+ E+ +G L
Sbjct: 92 SGTKKSKDKESARGKEKKPDDYPKGALSPYIIFVNENREKLKAKHPDMKNTELLSEMGNL 151
Query: 237 WNKLKESEKAVYQEKALKDKERYRIEMEDY 266
W K+ E EK+ YQ+ A +DK RY EM Y
Sbjct: 152 WKKVTEEEKSRYQKLADEDKLRYDREMAAY 181
>gi|196003770|ref|XP_002111752.1| hypothetical protein TRIADDRAFT_23407 [Trichoplax adhaerens]
gi|190585651|gb|EDV25719.1| hypothetical protein TRIADDRAFT_23407, partial [Trichoplax
adhaerens]
Length = 257
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 187 RKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEK 245
RK+ +D PK +GY F + +++ +P EI++++G W+ L SEK
Sbjct: 3 RKRKRFSSKDSNAPKAPHTGYVRFLNDSREKVRAENPDLPFSEITKILGTKWSSLPISEK 62
Query: 246 AVYQEKALKDKERYRIEMEDY 266
Y ++A KDKERY E+EDY
Sbjct: 63 QRYLDEAEKDKERYLKELEDY 83
>gi|320585897|gb|EFW98576.1| nucleosome-binding protein [Grosmannia clavigera kw1407]
Length = 94
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 173 ATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISR 231
AT V++RR +K DP PK S Y FF EQ ++ +PG ++ +
Sbjct: 5 ATKVKTGKVEKRRSKK-------DPNAPKRGLSAYMFFANEQRENVRDENPGISFGQVGK 57
Query: 232 MIGELWNKLKESEKAVYQEKALKDKERY 259
++GE W L E ++ Y+ KA DK+RY
Sbjct: 58 ILGERWKALNEKQRTPYEAKAAADKKRY 85
>gi|296231075|ref|XP_002760991.1| PREDICTED: TOX high mobility group box family member 3 [Callithrix
jacchus]
Length = 552
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 215 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 274
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 275 AKKEYLKALAAYRASL 290
>gi|327262061|ref|XP_003215844.1| PREDICTED: AT-rich interactive domain-containing protein 1B-like
[Anolis carolinensis]
Length = 2220
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 39/61 (63%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL RL+V V GG+ ++ K ++W+E++ N ++++ AS + ++Y Q L
Sbjct: 1061 LPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELSTTLNVGTSSSAASSLKKQYIQYL 1120
Query: 61 L 61
Sbjct: 1121 F 1121
>gi|403292578|ref|XP_003937316.1| PREDICTED: TOX high mobility group box family member 3 [Saimiri
boliviensis boliviensis]
Length = 551
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 215 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 274
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 275 AKKEYLKALAAYRASL 290
>gi|395747831|ref|XP_002826470.2| PREDICTED: TOX high mobility group box family member 3 [Pongo
abelii]
Length = 554
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 215 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 274
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 275 AKKEYLKALAAYRASL 290
>gi|334351203|sp|B7SBD2.1|TOX3_RAT RecName: Full=TOX high mobility group box family member 3; AltName:
Full=Trinucleotide repeat-containing gene 9 protein
gi|161702899|gb|ABX76291.1| TOX high mobility group box family member 3 [Rattus norvegicus]
Length = 577
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 250 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 309
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 310 AKKEYLKALAAYRASL 325
>gi|444711256|gb|ELW52204.1| TOX high mobility group box family member 3 [Tupaia chinensis]
Length = 437
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 215 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 274
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 275 AKKEYLKALAAYRASL 290
>gi|385302209|gb|EIF46351.1| nucleosome binding protein [Dekkera bruxellensis AWRI1499]
Length = 91
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 188 KKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKA 246
+K K++DP PK + S Y FF EQ ++ +PG +I +++GE W L + +
Sbjct: 3 RKGTRKKKDPNAPKRSLSAYMFFANEQRDIVRAENPGIAFGQIGKILGEKWKALDKKGRE 62
Query: 247 VYQEKALKDKERYRIEMEDYRERLKT 272
Y KA DK+RY +E +Y LKT
Sbjct: 63 PYDAKAAADKKRYELEKAEY---LKT 85
>gi|126274287|ref|XP_001387507.1| Nonhistone chromosomal protein 6A [Scheffersomyces stipitis CBS
6054]
gi|126213377|gb|EAZ63484.1| Nonhistone chromosomal protein 6A, partial [Scheffersomyces
stipitis CBS 6054]
Length = 85
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 187 RKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEK 245
++K+ K++DP PK + S Y FF E ++ +PG ++ +++GE W L EK
Sbjct: 5 KRKATRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALTGEEK 64
Query: 246 AVYQEKALKDKERYRIEMEDY 266
Y+ KA DK+RY E +Y
Sbjct: 65 GPYENKAEADKKRYEKEKAEY 85
>gi|440804471|gb|ELR25348.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 205
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHP----GKDREISRMIGELWNKLKESEKAVY 248
KR+DP PK + Y F E+ ++K HP G ++ +++GE W L + +K Y
Sbjct: 5 KRKDPNAPKRAMTAYMLFSQEKRTQIKTDHPTVGFG---QVGKLLGEAWAALPDGDKRKY 61
Query: 249 QEKALKDKERYRIEMEDYRE 268
E A KDK RY+ E Y+E
Sbjct: 62 NELAAKDKIRYQKEAAQYKE 81
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEK 251
K++DP PK S + F + R+K +P ++ ++IGE W+KL E+ ++
Sbjct: 98 KKKDPNAPKKPCSAFFHFSKKMRPRIKDENPDASFGQLGKIIGEQWSKLGADERKEFETL 157
Query: 252 ALKDKERYRIEMEDYR 267
A DKERY EM+DY+
Sbjct: 158 AAADKERYAKEMKDYQ 173
>gi|440799045|gb|ELR20106.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 143
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHP----GKDREISRMIGELWNKLKESEKAVY 248
K +DP PK ++ Y F E+ R K +P G ++++ + + W L + EKA Y
Sbjct: 46 KEKDPNAPKRAKTAYIIFATEERPRAKADNPELGFG---DLTKCVSDKWKALSDDEKAPY 102
Query: 249 QEKALKDKERYRIEMEDY 266
EKA +DKERY E+ Y
Sbjct: 103 LEKAAQDKERYADEVSKY 120
>gi|348540020|ref|XP_003457486.1| PREDICTED: TOX high mobility group box family member 4-like
[Oreochromis niloticus]
Length = 687
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 303 DPNEPQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDSLAEEQKQVYKRKTEA 362
Query: 255 DKERYRIEMEDYR 267
K+ Y + YR
Sbjct: 363 AKKEYLKALAAYR 375
>gi|395505933|ref|XP_003757291.1| PREDICTED: TOX high mobility group box family member 3-like
[Sarcophilus harrisii]
Length = 572
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 251 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 310
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 311 AKKEYLKALAAYRASL 326
>gi|339250984|ref|XP_003372975.1| high mobility group protein 1.2 [Trichinella spiralis]
gi|316969210|gb|EFV53345.1| high mobility group protein 1.2 [Trichinella spiralis]
Length = 599
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 173 ATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHP-GKDREISR 231
A A G R+RK++ ++DP PK S + FF + ++ HP K ++++
Sbjct: 72 AEVAAFGGEDALRKRKRN---KKDPNAPKRALSAFFFFSHAERPEVQKSHPDWKVGQLAQ 128
Query: 232 MIGELWNKLKESEKAVYQEKALKDKERYRI 261
+G +W L + +K Y+E A+KDK RY +
Sbjct: 129 ELGRMWKALNDEQKRKYEEMAIKDKARYEL 158
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 195 RDPAHPKPNRSGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEK 251
R+ P+ S Y FF E+H + P + EIS+ E W + + EK + E
Sbjct: 3 REAGKPRGKTSPYGFFVKMCYEEHKKKYPSENVQVTEISKKCSEKWKTMTQQEKQRFYEL 62
Query: 252 ALKDKERYRIEMEDY 266
A KD+ERY+ E+ +
Sbjct: 63 AQKDRERYQAEVAAF 77
>gi|426382171|ref|XP_004057690.1| PREDICTED: TOX high mobility group box family member 3 [Gorilla
gorilla gorilla]
Length = 576
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 251 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 310
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 311 AKKEYLKALAAYRASL 326
>gi|198282001|ref|NP_001123683.1| transcription factor A, mitochondrial precursor [Sus scrofa]
gi|75052621|sp|Q5D144.1|TFAM_PIG RecName: Full=Transcription factor A, mitochondrial; Short=mtTFA;
Flags: Precursor
gi|60326706|gb|AAX18878.1| mitochondrial transcription factor A [Sus scrofa]
Length = 246
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 181 VQRRRRRKKSEIKRRDPA---HPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELW 237
+ ++R +KK+ IK+R+ PK RS YN F AE R + G + + I E W
Sbjct: 133 IMQKRLKKKALIKKRELTMLGKPKRPRSAYNIFIAE---RFQEAKDGPSQVKLKTINENW 189
Query: 238 NKLKESEKAVYQEKALKDKERYRIEMEDYRERL 270
L S+K VY + A DK RY EM+ + E++
Sbjct: 190 KNLSSSQKQVYIQLAEDDKVRYYNEMKSWEEQM 222
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 199 HPKPNRSGYNFFFAEQHARLKPLHP-GKDREISRMIGELWNKLKESEKAVYQEKALKDKE 257
PK + Y F EQ K +P K+ E+ + I ELW +L +SEK +Y++ D +
Sbjct: 49 FPKKPMTSYVRFSKEQLPIFKAQNPDAKNSELIKKIAELWRELPDSEKKIYEDAYRADWQ 108
Query: 258 RYRIEMEDYRERLKTGQVIS-DAIPLQQRL 286
Y+ E+ +E+L Q++S + +Q+RL
Sbjct: 109 VYKEEVNRIQEQLTPSQMVSLEKEIMQKRL 138
>gi|114662470|ref|XP_001165206.1| PREDICTED: TOX high mobility group box family member 3 isoform 1
[Pan troglodytes]
Length = 577
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 251 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 310
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 311 AKKEYLKALAAYRASL 326
>gi|226054295|ref|NP_001073899.2| TOX high mobility group box family member 3 isoform 1 [Homo
sapiens]
gi|397498179|ref|XP_003819867.1| PREDICTED: TOX high mobility group box family member 3 [Pan
paniscus]
gi|146325793|sp|O15405.2|TOX3_HUMAN RecName: Full=TOX high mobility group box family member 3; AltName:
Full=CAG trinucleotide repeat-containing gene F9
protein; AltName: Full=Trinucleotide repeat-containing
gene 9 protein
gi|119603193|gb|EAW82787.1| hCG1639853 [Homo sapiens]
gi|208965628|dbj|BAG72828.1| TOX high mobility group box family member 3 [synthetic construct]
Length = 576
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 251 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 310
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 311 AKKEYLKALAAYRASL 326
>gi|301787699|ref|XP_002929265.1| PREDICTED: transcription factor A, mitochondrial-like [Ailuropoda
melanoleuca]
gi|281343623|gb|EFB19207.1| hypothetical protein PANDA_019385 [Ailuropoda melanoleuca]
Length = 246
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 181 VQRRRRRKKSEIKRRDPA---HPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELW 237
+ ++R ++K+ IK+R+ PK RS YN F AE R + G + + I E W
Sbjct: 133 ILQKRLKRKALIKKRELTMLGKPKRPRSAYNIFIAE---RFQEAKDGTSQVKLKTINENW 189
Query: 238 NKLKESEKAVYQEKALKDKERYRIEMEDYRERLK 271
L S+K VY + A DK RY EM+ + E++K
Sbjct: 190 KNLSSSQKQVYIQLANDDKIRYYNEMKSWEEQMK 223
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 198 AHPKPNRSGYNFFFAEQHARLKPLHP-GKDREISRMIGELWNKLKESEKAVYQEKALKDK 256
++PK + Y F EQ K +P K+ E+ R I +LW +L +SEK +Y++ D
Sbjct: 48 SYPKKPLTSYVRFSKEQLPIFKAQNPDAKNSELIRKIAQLWRELPDSEKKIYEDAYRADW 107
Query: 257 ERYRIEMEDYRERLKTGQVIS-DAIPLQQRL 286
+ Y+ E+ +E+L Q++S + LQ+RL
Sbjct: 108 QAYKEEINRIQEQLTPSQIVSLEKEILQKRL 138
>gi|386783903|gb|AFJ24846.1| high mobility group-1 [Schmidtea mediterranea]
Length = 192
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 189 KSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAV 247
K++ K +DP PK + + FF E ++K +P K ++++++G++W K+ K+
Sbjct: 82 KNKRKIKDPNKPKGAWTAFFFFSDEHRKKIKEENPEYKVGDVAKVLGKMWEACKD--KSK 139
Query: 248 YQEKALKDKERYRIEMEDYR 267
Y+E+A +DKERY E+E+Y+
Sbjct: 140 YEEQAKRDKERYNKELEEYK 159
>gi|351707340|gb|EHB10259.1| TOX high mobility group box family member 3 [Heterocephalus glaber]
Length = 437
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 215 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 274
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 275 AKKEYLKALAAYRASL 290
>gi|296471997|tpg|DAA14112.1| TPA: transcription factor A, mitochondrial precursor [Bos taurus]
gi|440896556|gb|ELR48454.1| Transcription factor A, mitochondrial [Bos grunniens mutus]
Length = 246
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 181 VQRRRRRKKSEIKRRDP---AHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELW 237
+ ++R +KK+ IK+R+ PK RS YN F AE R + G + + I E W
Sbjct: 133 IMQKRLKKKALIKKRELTMLGKPKRPRSAYNIFIAE---RFQEARDGTSQVKLKAINENW 189
Query: 238 NKLKESEKAVYQEKALKDKERYRIEMEDYRERL 270
L S+K VY + A DK RY EM+ + E++
Sbjct: 190 KNLSNSQKQVYIQLAKDDKIRYYNEMKSWEEQM 222
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 199 HPKPNRSGYNFFFAEQHARLKPLHP-GKDREISRMIGELWNKLKESEKAVYQEKALKDKE 257
+PK + Y F EQ K +P K+ E+ + I +LW +L +SEK +Y++ D +
Sbjct: 49 YPKKPMTSYVRFSKEQLPIFKAQNPDAKNSELIKKIAKLWRELPDSEKKIYEDAYRADWQ 108
Query: 258 RYRIEMEDYRERLKTGQVIS-DAIPLQQRL 286
Y+ E+ +E+L Q++S + +Q+RL
Sbjct: 109 VYKEEINRIQEQLTPSQMVSLEKEIMQKRL 138
>gi|390348241|ref|XP_784026.3| PREDICTED: uncharacterized protein LOC578784 [Strongylocentrotus
purpuratus]
Length = 273
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKA 252
K RDP PK + Y +F + ++K K R ++ + GE WNKL + +K Y E+
Sbjct: 102 KVRDPDKPKKPPTAYFYFLTDFREQMKGKTIEKGRRLTEICGEEWNKLTDEQKKPYLERV 161
Query: 253 LKDKERYRIEMEDYRER 269
+ + Y+ +MED+R++
Sbjct: 162 ALEYKTYQGKMEDWRKK 178
>gi|389582482|dbj|GAB65220.1| high mobility group protein putative [Plasmodium cynomolgi strain
B]
Length = 194
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHP--GKD-REISRMIGELWNKLKESEKAVYQEKA 252
DP PK S Y F+ ++ L P KD ++ +++GE W KL ++K Y++KA
Sbjct: 115 DPLAPKRALSAYMFYVKDKRLELIKERPELAKDVAQVGKLVGEAWGKLSAAQKTPYEKKA 174
Query: 253 LKDKERYRIEMEDYRE 268
DK RY E+E+YR+
Sbjct: 175 QLDKVRYSKEIEEYRK 190
>gi|291403518|ref|XP_002718101.1| PREDICTED: high mobility group box 3-like [Oryctolagus cuniculus]
Length = 197
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK S + F +E ++K +PG ++++ +GE+WN L +S+K Y KA K
Sbjct: 89 DPNAPKRPPSRFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSDKQQYITKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVTDYKSKGK 165
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDW 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|389626627|ref|XP_003710967.1| non-histone chromosomal protein 6 [Magnaporthe oryzae 70-15]
gi|78192124|gb|ABB30152.1| nonhistone protein 6 [Magnaporthe grisea]
gi|291195731|gb|ADD84582.1| nonhistone chromosomal protein 6B [Magnaporthe oryzae]
gi|351650496|gb|EHA58355.1| non-histone chromosomal protein 6 [Magnaporthe oryzae 70-15]
gi|440463464|gb|ELQ33044.1| nucleosome binding protein [Magnaporthe oryzae Y34]
gi|440481294|gb|ELQ61893.1| nucleosome binding protein [Magnaporthe oryzae P131]
Length = 101
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 194 RRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKA 252
++DP PK S Y FF EQ ++ +PG ++ +++GE W L + ++A Y KA
Sbjct: 18 KKDPMAPKRGLSAYMFFANEQRDNVREENPGVTFGQVGKILGERWKALSDKQRAPYDAKA 77
Query: 253 LKDKERYRIEMEDYR 267
DK+RY E Y+
Sbjct: 78 AADKKRYEDEKAAYQ 92
>gi|402591244|gb|EJW85174.1| hypothetical protein WUBG_03914 [Wuchereria bancrofti]
Length = 246
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 163 SSYNVINNNNATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLH 222
S+ N I + T + RR RKK +RDP P+ S Y FF + A +K
Sbjct: 68 SNTNDIAVTDTTNQVTNRTSRRTIRKKRS--KRDPNEPQKPVSAYALFFRDTQATIKGRS 125
Query: 223 PGKDR-EISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYR 267
P E+S+++ +W+ L K++Y+++ K+ Y ++ YR
Sbjct: 126 PNASFGEVSKIVASMWDSLDCHAKSLYKQRTEMAKKDYLKKLAAYR 171
>gi|156369656|ref|XP_001628091.1| predicted protein [Nematostella vectensis]
gi|156215058|gb|EDO36028.1| predicted protein [Nematostella vectensis]
Length = 180
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 200 PKPNRSGYNFFFAEQHARLKPLHPGKDR--EISRMIGELWNKLKESEKAVYQEKALKDKE 257
PK +S YNFF +Q +L+ GK + S++ E W + E EK + +KA KDKE
Sbjct: 3 PKGAKSAYNFFLQDQREKLQ-REEGKFSLADFSKVSAEKWKNMSEEEKETFVQKAGKDKE 61
Query: 258 RYRIEMEDY 266
R++ EM+ Y
Sbjct: 62 RFKEEMQSY 70
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWNKLKESEKAVYQEKALK 254
DP PK S Y F + +K +P +S+++GE+W+K+ + +K YQ+ A K
Sbjct: 89 DPNKPKRCLSAYFHFINLKRDDVKKDNPNASGGALSKVLGEMWSKMTDDDKTQYQDMAKK 148
Query: 255 DKERYRIEMEDYRE 268
DK RY EM+ +++
Sbjct: 149 DKVRYESEMKAFKD 162
>gi|326676724|ref|XP_696565.5| PREDICTED: AT-rich interactive domain-containing protein 1A [Danio
rerio]
Length = 2177
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 1012 LPAVGRKPLDLFRLYVSVKEIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 1070
Query: 61 LRDYE 65
L +E
Sbjct: 1071 LYAFE 1075
>gi|189442849|gb|AAI67799.1| TOX high mobility group box family member 3 [synthetic construct]
Length = 589
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 251 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 310
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 311 AKKEYLKALAAYRASL 326
>gi|392300930|gb|EIW12019.1| Nhp6bp [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 162
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 172 NATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EIS 230
NA A Q + +K++ +++DP PK S Y FF E ++ +P ++
Sbjct: 62 NAMAATKEAKQPKEPKKRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVTFGQVG 121
Query: 231 RMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDY 266
R++GE W L EK Y+ KA DK+RY E E Y
Sbjct: 122 RILGERWKALTAEEKQPYESKAQADKKRYESEKELY 157
>gi|358060355|dbj|GAA93760.1| hypothetical protein E5Q_00406 [Mixia osmundae IAM 14324]
Length = 119
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 188 KKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKA 246
KKS K +DP PK S Y F+ ++ ++K +P E+ +++G W L ESEK
Sbjct: 35 KKSGKKEKDPNAPKRPLSAYMFYSQDKRTQVKEDNPDASFGELGKILGAQWKDLDESEKK 94
Query: 247 VYQEKALKDKERY 259
Y + A +DKERY
Sbjct: 95 QYNDMATRDKERY 107
>gi|223649496|gb|ACN11506.1| High mobility group protein B3 [Salmo salar]
Length = 207
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 168 INNNNATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD- 226
+ +N H G ++ R++ DP PK SG+ F A+ ++K HP
Sbjct: 69 VRYDNEMMHFAPGGKKGRKK--------DPNAPKRPPSGFFIFCADHRPKIKAQHPSLGI 120
Query: 227 REISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYR 267
++++ +GE WN L ++ K Y KA K K++Y+ ++ DY+
Sbjct: 121 GDVAKKLGEQWNNLTDATKQPYLIKANKLKDKYQKDVADYK 161
>gi|72387033|ref|XP_843941.1| high mobility group protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|123380|sp|P26586.1|HMGL_TRYBR RecName: Full=High mobility group protein homolog TDP-1
gi|162109|gb|AAA73081.1| unnamed protein product [Trypanosoma brucei]
gi|62175531|gb|AAX69670.1| high mobility group protein, putative [Trypanosoma brucei]
gi|70800473|gb|AAZ10382.1| high mobility group protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 271
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 199 HPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALKDKE 257
+PKP S Y F A+Q LK +PG ++ I + +G++W+ + K Y++KA +DK
Sbjct: 117 YPKPAVSSYLLFVADQREELKAKNPGMQNTAILQTLGKMWSDASDDVKEHYRKKAEEDKA 176
Query: 258 RYRIEMEDYR 267
R+R E+++Y+
Sbjct: 177 RFRREVDEYK 186
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 194 RRDPAHPKPNRSGYNFF---FAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQE 250
++D PK + + FF F +H+ L + E+S+ G W +L E+ VY+E
Sbjct: 200 KKDSNAPKRAMTSFMFFSSDFRSKHSDLSIV------EMSKAAGAAWKELGPEERKVYEE 253
Query: 251 KALKDKERYRIEM 263
A KDKERY+ EM
Sbjct: 254 MAEKDKERYKREM 266
>gi|397568766|gb|EJK46329.1| hypothetical protein THAOC_35006 [Thalassiosira oceanica]
Length = 356
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 169 NNNNATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-R 227
NN A ++R + KK ++ RDP PK + +N F + ++K +P K+
Sbjct: 254 NNEKPAAKPAVAIKRVKSNKKGKV--RDPNRPKAPLTAFNLFAKSRREKIKTSNPDKNFN 311
Query: 228 EISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDY 266
EIS ++G+ W L + E+ + + A ++ Y+ M Y
Sbjct: 312 EISALVGKAWKALADDERKQFFDDAAAERAEYKEAMTRY 350
>gi|307170751|gb|EFN62876.1| High mobility group protein 20A [Camponotus floridanus]
Length = 328
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 12/135 (8%)
Query: 183 RRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLK 241
R ++RKK+ RD PK SGY F ++ +++ +P EI++++ W+KL
Sbjct: 64 RTKKRKKTP---RDATAPKQPLSGYFLFLNDRREKVRSENPSLTFTEITKLLASEWSKLP 120
Query: 242 ESEKAVYQEKALKDKERYRIEMEDYRE----RLKTGQVISDAIPLQQRLPGADVDMVEVD 297
+K Y + A +DKERY E +Y++ RL + ++ G DV++ + D
Sbjct: 121 GDQKQQYLDAAEQDKERYNREFSNYKQTEAYRLFNEKQSERQNENKKERNGTDVNVEQND 180
Query: 298 TKLDE----TGGDSP 308
+ D+ TG D P
Sbjct: 181 VQQDKDNDFTGFDIP 195
>gi|426243524|ref|XP_004015604.1| PREDICTED: TOX high mobility group box family member 3 [Ovis aries]
Length = 541
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 246 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 305
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 306 AKKEYLKALAAYRASL 321
>gi|402882719|ref|XP_003904882.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Papio anubis]
Length = 132
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEK 251
K+ DP PK SG+ F +E H ++K +PG ++++ +GE+W L +SEK Y K
Sbjct: 23 KKNDPNAPKRPLSGFFLFCSEFHPKMKSTNPGISIGDVAKKLGEMWKNLNDSEKQPYVTK 82
Query: 252 ALKDKERYRIEMEDYRERLK 271
K +Y ++ DY+ + K
Sbjct: 83 VAK-LMKYEKDVADYKSKGK 101
>gi|334311690|ref|XP_001371950.2| PREDICTED: TOX high mobility group box family member 3 [Monodelphis
domestica]
Length = 572
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 251 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 310
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 311 AKKEYLKALAAYRASL 326
>gi|291242470|ref|XP_002741130.1| PREDICTED: high mobility group 20A-like [Saccoglossus kowalevskii]
Length = 375
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 195 RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWNKLKESEKAVYQEKAL 253
+D P+ +GY F ++ +++ +P ++++M+G W+KL ++EK Y ++A
Sbjct: 108 KDVNAPRAPLTGYIRFLNDRREKVRSDNPSLTFPDVTKMLGNEWSKLSQAEKQRYLDEAE 167
Query: 254 KDKERYRIEMEDYRE 268
KDKERY E+E Y++
Sbjct: 168 KDKERYMKELEQYQQ 182
>gi|224004166|ref|XP_002295734.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585766|gb|ACI64451.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 469
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 21/129 (16%)
Query: 185 RRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKP-----LHPGKDREISRMI------ 233
RR++ + KR + P+ + S YN F EQ RL L D +++R++
Sbjct: 131 RRKQPYKRKRMEREAPRKSLSAYNLFVREQFVRLAKENESVLQDSADMQLARVVPQMNVA 190
Query: 234 --GELWNKLKESEKAVYQEKALKDKERYRIEMEDY--------RERLKTGQVISDAIPLQ 283
G+ W KL ++EKA Y+ A DK RY E+ Y ++R KTG + +
Sbjct: 191 AAGKAWKKLTQAEKAKYEALAKPDKVRYEAEVAAYCPGERRRGKKRQKTGYNLFYTDHVA 250
Query: 284 QRLPGADVD 292
+R GA+ D
Sbjct: 251 ERKRGAEND 259
>gi|347962987|ref|XP_311155.4| AGAP000005-PA [Anopheles gambiae str. PEST]
gi|333467412|gb|EAA06432.5| AGAP000005-PA [Anopheles gambiae str. PEST]
Length = 457
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 187 RKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEK 245
R K + +DP PK + S + +F ++ ++K L+P +I++ +G W+ + K
Sbjct: 298 RGKKRKQFKDPNAPKRSLSAFFWFCHDERNKVKALNPEYGVGDIAKELGRKWSDMDAEIK 357
Query: 246 AVYQEKALKDKERYRIEMEDYRERLKTGQ-VISDAIPLQQRLPGADVDMV 294
Y++ A KDK+RY EM +Y+ + K Q ++ + L Q+L A + +
Sbjct: 358 QKYEQMAEKDKQRYEQEMTEYKLKCKNEQGGVTPGLNLPQQLQQAGLQHL 407
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 15/104 (14%)
Query: 166 NVINNNNATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGK 225
NVI N T V+G + + + P+ + Y FF K HP +
Sbjct: 197 NVILNKMVTGGTVAGGKVKDNK------------PRGRMTAYAFFVQTCREEHKKKHPEE 244
Query: 226 D---REISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDY 266
E SR E W + + EK + E A KDK RY +EM+ Y
Sbjct: 245 QVIFAEFSRKCAERWKTMLDKEKQRFHEMAEKDKARYELEMQSY 288
>gi|380021877|ref|XP_003694783.1| PREDICTED: high mobility group protein 20A-like [Apis florea]
Length = 329
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 160 QVPSSY--NVINNNNAT----AHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAE 213
++P S N I NN T ++ + R ++RKK+ RD PK +GY F +
Sbjct: 40 KIPDSICDNGIKKNNVTPIIGSNTTNTTNRAKKRKKTP---RDATAPKQPLTGYFRFLND 96
Query: 214 QHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRE 268
+ +++ +P EI++++ W+ L +K Y + A +DKERY E DY++
Sbjct: 97 RREKVRNENPTLSFAEITKLLASEWSTLPADQKQQYLDAAEQDKERYNREFSDYKQ 152
>gi|345793923|ref|XP_544407.3| PREDICTED: TOX high mobility group box family member 3 [Canis lupus
familiaris]
Length = 609
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 283 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 342
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 343 AKKEYLKALAAYRASL 358
>gi|156151422|ref|NP_001029188.2| transcription factor A, mitochondrial precursor [Bos taurus]
gi|121956669|sp|Q0II87.1|TFAM_BOVIN RecName: Full=Transcription factor A, mitochondrial; Short=mtTFA;
Flags: Precursor
gi|113911921|gb|AAI22755.1| Transcription factor A, mitochondrial [Bos taurus]
Length = 246
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 181 VQRRRRRKKSEIKRRDP---AHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELW 237
+ ++R +KK+ IK+R+ PK RS YN F AE R + G + + I E W
Sbjct: 133 IMQKRLKKKALIKKRELTMLGKPKRPRSAYNIFIAE---RFQEARDGTSQVKLKAINENW 189
Query: 238 NKLKESEKAVYQEKALKDKERYRIEMEDYRERL 270
L S+K VY + A DK RY EM+ + E++
Sbjct: 190 KNLSNSQKQVYIQLAKDDKIRYYNEMKSWEEQM 222
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 199 HPKPNRSGYNFFFAEQHARLKPLHP-GKDREISRMIGELWNKLKESEKAVYQEKALKDKE 257
+PK + Y F EQ K +P K+ E+ + I +LW +L +SEK +Y++ D +
Sbjct: 49 YPKKPMTSYVRFSKEQLPIFKAQNPDAKNSELIKKIAKLWRELPDSEKKIYEDAYRADWQ 108
Query: 258 RYRIEMEDYRERLKTGQVIS-DAIPLQQRL 286
Y+ E+ +E+L Q++S + +Q+RL
Sbjct: 109 VYKEEINRIQEQLTPSQMVSLEKEIMQKRL 138
>gi|357492685|ref|XP_003616631.1| FACT complex subunit SSRP1 [Medicago truncatula]
gi|355517966|gb|AES99589.1| FACT complex subunit SSRP1 [Medicago truncatula]
Length = 648
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ FF + +K +PG ++++++GE W K+ EK Y+ KA
Sbjct: 559 DPNAPKRGMSGFMFFSQMERENIKKANPGISFTDVAKLLGENWKKMSAEEKEPYEAKARV 618
Query: 255 DKERYRIE 262
DK+RY E
Sbjct: 619 DKKRYEDE 626
>gi|346324407|gb|EGX94004.1| nucleosome binding protein [Cordyceps militaris CM01]
Length = 96
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 194 RRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKA 252
++DP PK S Y FF EQ ++ +PG ++ +++GE W L E ++ Y+ KA
Sbjct: 20 KKDPNAPKRGLSAYMFFANEQRDNVREENPGVSFGQVGKILGERWKALSEKQRVPYEAKA 79
Query: 253 LKDKERYRIEMEDY 266
DK+RY E Y
Sbjct: 80 AADKKRYEDEKAAY 93
>gi|409075359|gb|EKM75740.1| hypothetical protein AGABI1DRAFT_116212 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426198009|gb|EKV47935.1| hypothetical protein AGABI2DRAFT_191645 [Agaricus bisporus var.
bisporus H97]
Length = 262
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 186 RRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESE 244
+++K K +DP PK S Y F E +LK HP + E+ MI ++W K+ E E
Sbjct: 67 KKRKRNAKPKDPNAPKRPASSYILFQNEIRKQLKDQHPELTNAELLNMISDIWKKMSEDE 126
Query: 245 KAVYQEKALKDKERYRIEMEDYRER 269
KA Y + KERY + + Y R
Sbjct: 127 KATYHKLVEDAKERYSQDKKAYDSR 151
>gi|397524101|ref|XP_003832048.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Pan paniscus]
Length = 130
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 194 RRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKA 252
+ DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y K
Sbjct: 23 KNDPNAPKRPLSGFFLFCSEFCPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKV 82
Query: 253 LKDKERYRIEMEDYRERLK 271
K K +Y ++ DY+ + K
Sbjct: 83 AKLK-KYEKDVADYKSKGK 100
>gi|395839552|ref|XP_003792652.1| PREDICTED: TOX high mobility group box family member 3 [Otolemur
garnettii]
Length = 782
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 464 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 523
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 524 AKKEYLKALAAYRASL 539
>gi|62321053|dbj|BAD94127.1| recombination signal sequence recognition protein [Arabidopsis
thaliana]
Length = 208
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 205 SGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALKDKERYRIEM 263
SG+ FF + +K HPG E+ +++G+ W ++ +K Y+ KA DK+RY+ E+
Sbjct: 129 SGFMFFSQMERDNIKKEHPGIAFGEVGKVLGDKWRQMSADDKEPYEAKAQVDKQRYKDEI 188
Query: 264 EDYR 267
DY+
Sbjct: 189 SDYK 192
>gi|440894115|gb|ELR46659.1| TOX high mobility group box family member 3, partial [Bos grunniens
mutus]
Length = 543
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 225 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 284
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 285 AKKEYLKALAAYRASL 300
>gi|297461758|ref|XP_885168.3| PREDICTED: TOX high mobility group box family member 3 isoform 2
[Bos taurus]
gi|297485262|ref|XP_002694823.1| PREDICTED: TOX high mobility group box family member 3 [Bos taurus]
gi|296478066|tpg|DAA20181.1| TPA: TOX high mobility group box family member 3-like [Bos taurus]
Length = 556
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 251 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 310
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 311 AKKEYLKALAAYRASL 326
>gi|226246533|ref|NP_001139660.1| TOX high mobility group box family member 3 isoform 2 [Homo
sapiens]
gi|194387658|dbj|BAG61242.1| unnamed protein product [Homo sapiens]
Length = 571
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 246 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 305
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 306 AKKEYLKALAAYRASL 321
>gi|47207505|emb|CAF92773.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1644
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL RL+V V GG+ ++ K ++W+E+ N T+++A+ L+K Y
Sbjct: 416 LPAVGRKPLDLFRLYVSVKQIGGLTQVNKNKKWRELATNLNV-GTSSSAASSLKKQYIQC 474
Query: 61 LRDYE 65
L +E
Sbjct: 475 LYAFE 479
>gi|195146538|ref|XP_002014241.1| GL19092 [Drosophila persimilis]
gi|194106194|gb|EDW28237.1| GL19092 [Drosophila persimilis]
Length = 1854
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP++ K LDL+ L V GG+E+ K+R+W +V +PS+ + + L+ +Y+ +
Sbjct: 238 IPMVERKALDLYTLHRIVHEEGGMEQTTKDRKWAKVANRMQYPSSKSVGA-TLKSHYERI 296
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSP 94
L +E +Y + GP+ A +A G+ P+P
Sbjct: 297 LHPFE-VY---TSGKVLGPAAAAAAATGSGTPTP 326
>gi|444516536|gb|ELV11201.1| Lysine-specific demethylase 5C [Tupaia chinensis]
Length = 1358
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP + K LDL+ L VT GG E I K+RRW V N+P N +LR +Y+ +
Sbjct: 102 IPNVERKILDLYSLNKVVTEEGGYEAICKDRRWARVAQRLNYPQ-GKNIGSLLRSHYEHI 160
Query: 61 LRDYEQI 67
+ YE
Sbjct: 161 IYPYEMF 167
>gi|189230320|ref|NP_001121484.1| TOX high mobility group box family member 3 [Xenopus (Silurana)
tropicalis]
gi|183986342|gb|AAI66269.1| LOC100158584 protein [Xenopus (Silurana) tropicalis]
Length = 580
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 253 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVYKRKTEA 312
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 313 AKKEYLKALAAYRASL 328
>gi|70953373|ref|XP_745792.1| high mobility group protein [Plasmodium chabaudi chabaudi]
gi|56526224|emb|CAH87922.1| high mobility group protein, putative [Plasmodium chabaudi
chabaudi]
Length = 98
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREIS---RMIGELWNKLKESEKAVYQEKA 252
DP PK S Y F+ ++ + P +E++ ++IGE W +L ++KA Y++KA
Sbjct: 20 DPLAPKRALSAYMFYVKDKRLEIIQERPELAKEVAQVGKLIGEAWGQLTPAQKAPYEKKA 79
Query: 253 LKDKERYRIEMEDYR 267
DK RY E+E+Y+
Sbjct: 80 ELDKVRYSKEIEEYK 94
>gi|297283989|ref|XP_001084652.2| PREDICTED: TOX high mobility group box family member 3 isoform 1
[Macaca mulatta]
Length = 744
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 403 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 462
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 463 AKKEYLKALAAYRASL 478
>gi|198475914|ref|XP_002132215.1| GA25342 [Drosophila pseudoobscura pseudoobscura]
gi|198137463|gb|EDY69617.1| GA25342 [Drosophila pseudoobscura pseudoobscura]
Length = 1887
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
IP++ K LDL+ L V GG+E+ K+R+W +V +PS+ + + L+ +Y+ +
Sbjct: 247 IPMVERKALDLYTLHRIVHEEGGMEQTTKDRKWAKVANRMQYPSSKSVGA-TLKSHYERI 305
Query: 61 LRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSP 94
L +E +Y + GP+ A +A G+ P+P
Sbjct: 306 LHPFE-VY---TSGKVLGPAAAAAAATGSGTPTP 335
>gi|85110964|ref|XP_963712.1| hypothetical protein NCU02819 [Neurospora crassa OR74A]
gi|28925429|gb|EAA34476.1| hypothetical protein NCU02819 [Neurospora crassa OR74A]
Length = 597
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 181 VQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD---REISRMIGELW 237
V +R+ R+ + P P S Y F + LK G++ EI++++GE W
Sbjct: 108 VTKRKYRRHPKADENAPERPP---SAYVLFSNKMREDLK----GRNLSFTEIAKLVGENW 160
Query: 238 NKLKESEKAVYQEKALKDKERYRIEMEDYR---ERLKTGQVISDAIPLQQRLPGADVDMV 294
L +EK Y+ KA KE+Y E+ +Y+ + K Q ++D + LP D D
Sbjct: 161 QNLTPAEKEPYESKAQAYKEKYHAELAEYKKTPQYQKYMQYLAD-FKAKHSLPSQDNDSS 219
Query: 295 EVDTKLDETGGDS 307
+ KL E+GG S
Sbjct: 220 K-RVKLSESGGPS 231
>gi|401885246|gb|EJT49369.1| nonhistone protein 6 [Trichosporon asahii var. asahii CBS 2479]
gi|406694772|gb|EKC98094.1| nonhistone protein 6 [Trichosporon asahii var. asahii CBS 8904]
Length = 108
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 194 RRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKA 252
++DP PK S Y FF + R+K +P D + R++G W ++ SEK Y++KA
Sbjct: 17 KKDPNKPKRALSAYMFFVQDWRERIKSENPDADFGSVGRLLGAKWQEMSASEKKPYEDKA 76
Query: 253 LKDKERYRIEMEDY 266
DK+R E +Y
Sbjct: 77 QADKDRAAKEKAEY 90
>gi|66523545|ref|XP_625193.1| PREDICTED: high mobility group protein 20A-like isoform 1 [Apis
mellifera]
Length = 329
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 160 QVPSSY--NVINNNNAT----AHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAE 213
++P S N I NN T ++ + R ++RKK+ RD PK +GY F +
Sbjct: 40 KIPDSICDNGIKKNNVTPIIGSNNTNTTNRAKKRKKTP---RDATAPKQPLTGYFRFLND 96
Query: 214 QHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRE 268
+ +++ +P EI++++ W+ L +K Y + A +DKERY E DY++
Sbjct: 97 RREKVRSENPTLSFAEITKLLASEWSTLPADQKQQYLDAAEQDKERYNREFSDYKQ 152
>gi|365982599|ref|XP_003668133.1| hypothetical protein NDAI_0A07360 [Naumovozyma dairenensis CBS 421]
gi|343766899|emb|CCD22890.1| hypothetical protein NDAI_0A07360 [Naumovozyma dairenensis CBS 421]
Length = 417
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 183 RRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKE 242
++ + K+ + K RDP PK + Y F E + + L +++R + ELW L E
Sbjct: 81 KKGKSKRIKNKLRDPNLPKRPTNAY-LIFCEMNK--ENLRSNGSLDVTRDLSELWKSLDE 137
Query: 243 SEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAI 280
+ ++ Y + +D+ERYR EME Y + L+ I A+
Sbjct: 138 TGRSPYFDLYNQDRERYRSEMETYNKNLENSNNIVPAL 175
>gi|221120410|ref|XP_002166637.1| PREDICTED: high mobility group-T protein-like [Hydra
magnipapillata]
gi|388594888|gb|AFK74879.1| transcription factor HMG-B3b [Hydra vulgaris]
Length = 177
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 200 PKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALKDKER 258
PK N S Y F + +LK +P E+++MIGE W KL +S+K Y+ A KD++R
Sbjct: 108 PKRNVSAYFHFASAIRPKLKADNPTLGVTELAKMIGERWQKLTDSDKKPYENLAAKDRDR 167
Query: 259 YRIEMEDY 266
Y+ E+ +Y
Sbjct: 168 YQRELSEY 175
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 194 RRDPAHPKPNRSGYNFFFAEQHARLKPLHPGK----DREISRMIGELWNKLKESEKAVYQ 249
R+DP PK ++ + F E+ R L G+ E ++ +G LW ++ + EK Y
Sbjct: 5 RKDPNKPKGAKTSF-IIFGEK-TRADRLEKGETIPTQTEFAKELGNLWKEMSKEEKKPYL 62
Query: 250 EKALKDKERYRIEMEDY 266
+ A +DK+R++ EME Y
Sbjct: 63 DLAAEDKKRFQKEMEGY 79
>gi|397565560|gb|EJK44676.1| hypothetical protein THAOC_36770 [Thalassiosira oceanica]
Length = 237
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 41/94 (43%), Gaps = 12/94 (12%)
Query: 200 PKPNRSGYNFFFAEQHARLK---PLHPGKD---------REISRMIGELWNKLKESEKAV 247
PK S YN FF E+ RL G D +E++R IG W L E E+
Sbjct: 101 PKRALSAYNVFFKEERVRLLDEFKASEGTDTTDTPRIGFQEMARTIGSRWRNLSEEERKY 160
Query: 248 YQEKALKDKERYRIEMEDYRERLKTGQVISDAIP 281
Y +A D RY EM+ Y+ R K + A P
Sbjct: 161 YNSEAQSDTARYNKEMDAYKARKKKLIATNSAPP 194
>gi|73953051|ref|XP_546107.2| PREDICTED: transcription factor A, mitochondrial [Canis lupus
familiaris]
Length = 246
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 181 VQRRRRRKKSEIKRRDPA---HPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELW 237
+ ++R +KK+ IK+R+ PK RS YN F AE R + G + + I E W
Sbjct: 133 ILQKRLKKKALIKKRELTMLGKPKRPRSAYNIFIAE---RFQETKDGTSQVKLKTINENW 189
Query: 238 NKLKESEKAVYQEKALKDKERYRIEMEDYRERL 270
L S+K VY + A DK RY EM+ + E++
Sbjct: 190 KNLSSSQKQVYIQLANDDKIRYYNEMKSWEEQM 222
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 199 HPKPNRSGYNFFFAEQHARLKPLHP-GKDREISRMIGELWNKLKESEKAVYQEKALKDKE 257
+PK + Y F EQ K +P K+ E+ R I +LW +L ESEK +Y++ D +
Sbjct: 49 YPKKPLTSYVRFSKEQLPIFKAQNPDAKNSELIRKIAQLWRELPESEKKIYEDAYRADWQ 108
Query: 258 RYRIEMEDYRERLKTGQVIS-DAIPLQQRL 286
Y+ E+ +E+L Q++S + LQ+RL
Sbjct: 109 AYKEEINRIQEQLTPSQIMSLEKEILQKRL 138
>gi|268571579|ref|XP_002641089.1| C. briggsae CBR-HMG-1.2 protein [Caenorhabditis briggsae]
Length = 239
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 177 AVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHP-GKDREISRMIGE 235
A G R+RK++ ++DP PK S + F+ ++ ++ HP K ++++ +G+
Sbjct: 117 AYGGEDAMRKRKRA---KKDPHAPKRALSAFFFYSQDKRPEIQGQHPDWKVGQVAQELGK 173
Query: 236 LWNKLKESEKAVYQEKALKDKERYRIEMEDYRERL 270
+W + + K Y+ KA DK+RY EM Y++ +
Sbjct: 174 MWKLVPQETKDAYETKAQADKDRYAEEMRHYKQEM 208
>gi|327268628|ref|XP_003219098.1| PREDICTED: high mobility group protein B2-like [Anolis
carolinensis]
Length = 209
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEK 251
KR+DP PK S + F +E ++K HPG + ++ +GE+W+ +K +++K
Sbjct: 86 KRKDPNAPKRPPSAFFLFCSEHRPKIKSDHPGLSIGDTAKKLGEMWSLQTAKDKLPFEQK 145
Query: 252 ALKDKERYRIEMEDYRERLKT 272
ALK KE+Y ++ YR + K+
Sbjct: 146 ALKLKEKYDKDIAAYRAKDKS 166
>gi|25395797|pir||E88479 protein F47D12.4 [imported] - Caenorhabditis elegans
Length = 202
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 173 ATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHP-GKDREISR 231
A A G R+RK++ ++DP PK S + F+ ++ ++ HP K ++++
Sbjct: 78 AEVAAYGGEDAMRKRKRA---KKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQ 134
Query: 232 MIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRERLK 271
+G++W + + K +Y++KA DK+RY EM +Y+ ++
Sbjct: 135 ELGKMWKLVPQETKDMYEQKAQADKDRYADEMRNYKAEMQ 174
>gi|322794517|gb|EFZ17570.1| hypothetical protein SINV_80020 [Solenopsis invicta]
Length = 322
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 183 RRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLK 241
R ++RKK+ RD P+ SGY F ++ +++ +P EI++++ W+KL
Sbjct: 63 RTKKRKKAP---RDATAPRQPLSGYFLFLNDRREKVRNQNPSLTFTEITKLLAAEWSKLP 119
Query: 242 ESEKAVYQEKALKDKERYRIEMEDYRE 268
+K Y + A +DKERY E DY++
Sbjct: 120 IDQKQHYLDAAEQDKERYNREFSDYKQ 146
>gi|52219178|ref|NP_001004674.1| high-mobility group box 2b [Danio rerio]
gi|51858850|gb|AAH81415.1| High-mobility group box 2 [Danio rerio]
gi|182889482|gb|AAI65150.1| Hmgb2 protein [Danio rerio]
Length = 214
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 189 KSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAV 247
K+ K++DP PK S + F +E +K HP EI++ +GELW+K ++A
Sbjct: 86 KTGRKKKDPNAPKRPPSAFFVFCSEYRPTVKSEHPNLTIGEIAKKLGELWSKQSSKDRAP 145
Query: 248 YQEKALKDKERYRIEMEDYR 267
+++KA K +E+Y E+ YR
Sbjct: 146 FEQKAGKLREKYEKEVAAYR 165
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 200 PKPNRSGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDK 256
PK S Y FF ++H R P P E S+ E W L S+K +++ A DK
Sbjct: 9 PKGKTSAYAFFVQTCRDEHKRKSPDVPVNFSEFSKKCSERWKSLNASDKVKFEDMAKADK 68
Query: 257 ERYRIEMEDY 266
RY EM+ Y
Sbjct: 69 VRYDREMKTY 78
>gi|355693103|gb|EHH27706.1| hypothetical protein EGK_17974, partial [Macaca mulatta]
Length = 621
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 195 RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKAL 253
+DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 218 KDPNKPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTE 277
Query: 254 KDKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 278 AAKKEYLKALAAYKD 292
>gi|348500302|ref|XP_003437712.1| PREDICTED: TOX high mobility group box family member 3-like
[Oreochromis niloticus]
Length = 590
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 255 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVYKSKTEA 314
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 315 AKKEYLKALAAYRASL 330
>gi|336465411|gb|EGO53651.1| hypothetical protein NEUTE1DRAFT_106544 [Neurospora tetrasperma
FGSC 2508]
gi|350295304|gb|EGZ76281.1| hypothetical protein NEUTE2DRAFT_122932 [Neurospora tetrasperma
FGSC 2509]
Length = 592
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 181 VQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD---REISRMIGELW 237
V +R+ R+ + P P S Y F + LK G++ EI++++GE W
Sbjct: 108 VTKRKYRRHPKADENAPERPP---SAYVLFSNKMREDLK----GRNLSFTEIAKLVGENW 160
Query: 238 NKLKESEKAVYQEKALKDKERYRIEMEDYR---ERLKTGQVISDAIPLQQRLPGADVDMV 294
L +EK Y+ KA KE+Y E+ +Y+ + K Q ++D + LP D D
Sbjct: 161 QNLTPAEKEPYESKAQAYKEKYHAELAEYKKTPQYQKYMQYLAD-FKAKHSLPSQDNDSS 219
Query: 295 EVDTKLDETGGDS 307
+ KL E+GG S
Sbjct: 220 K-RVKLSESGGPS 231
>gi|213982973|ref|NP_001135648.1| uncharacterized protein LOC100216207 [Xenopus (Silurana)
tropicalis]
gi|156914901|gb|AAI52619.1| Hmgb2 protein [Danio rerio]
gi|197245630|gb|AAI68534.1| Unknown (protein for MGC:181066) [Xenopus (Silurana) tropicalis]
Length = 214
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 189 KSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAV 247
K+ K++DP PK S + F +E +K HP EI++ +GELW+K ++A
Sbjct: 86 KTGRKKKDPNAPKRPPSAFFVFCSEYRPTVKSEHPNLTIGEIAKKLGELWSKQSSKDRAP 145
Query: 248 YQEKALKDKERYRIEMEDYR 267
+++KA K +E+Y E+ YR
Sbjct: 146 FEQKAGKLREKYEKEVAAYR 165
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 200 PKPNRSGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDK 256
PK S Y FF ++H R P P E S+ E W L S+K +++ A DK
Sbjct: 9 PKGKTSAYAFFVQTCRDEHKRKGPDVPVNFSEFSKKCSERWKSLNASDKVKFEDMAKADK 68
Query: 257 ERYRIEMEDY 266
RY EM+ Y
Sbjct: 69 VRYDREMKTY 78
>gi|85103796|ref|XP_961604.1| hypothetical protein NCU01238 [Neurospora crassa OR74A]
gi|16944479|emb|CAC28652.2| related to regulator protein rum1 [Neurospora crassa]
gi|28923151|gb|EAA32368.1| hypothetical protein NCU01238 [Neurospora crassa OR74A]
Length = 1736
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 68/177 (38%), Gaps = 19/177 (10%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPS-TATNASFVLRKYYQS 59
+P + K LDL RL V ARGG +K+ K ++W E+ + ++ S L+ YQ
Sbjct: 186 LPYVDKKPLDLFRLKKAVEARGGFDKVCKLKKWAEIGRDLGYSGKIMSSLSTSLKNSYQK 245
Query: 60 LLRDYEQIYFFRSQDSWQGPSTNAVSAPGTAQPSPDIQSAVQQPRINAAVLPEARPASSG 119
L YE Y ++ P T P+P R NA + R S
Sbjct: 246 WLCPYED-YLRVAKPGVHQQLELEYGGPLTPSPAPSPMK-----RSNAQTPSDLRGESPS 299
Query: 120 GSPVIGVIDGKF-ESGYLVTVTIGSETLKGVLYQAPQYPIHQVPSSYNVINNNNATA 175
P ++G +S VT+T AP P V S + IN TA
Sbjct: 300 RHPTEAAVNGHAKDSDRDVTMT-----------DAPSVPAPPVKSGFTAINTGGFTA 345
>gi|255537735|ref|XP_002509934.1| transcription factor, putative [Ricinus communis]
gi|223549833|gb|EEF51321.1| transcription factor, putative [Ricinus communis]
Length = 514
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK S + F E+ A L L K+ RE++++ GE W + E +K Y+E A +
Sbjct: 307 DPLKPKQPMSAFFLFSNERRASL--LAENKNVREVAKIAGEQWKNMTEEQKGPYEEMAKR 364
Query: 255 DKERYRIEMEDYRER 269
+K RY EME Y+++
Sbjct: 365 NKLRYMQEMEAYKQK 379
>gi|261327057|emb|CBH10033.1| high mobility group protein, putative [Trypanosoma brucei gambiense
DAL972]
Length = 271
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 199 HPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALKDKE 257
+PKP S Y F A+Q LK +PG ++ I + +G++W+ + K Y++KA +DK
Sbjct: 117 YPKPAVSSYLLFVADQREDLKAKNPGMQNTAILQTLGKMWSDASDDVKEHYRKKAEEDKA 176
Query: 258 RYRIEMEDYR 267
R+R E+++Y+
Sbjct: 177 RFRREVDEYK 186
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 194 RRDPAHPKPNRSGYNFF---FAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQE 250
++D PK + + FF F +H+ L + E+S+ G W +L E+ VY+E
Sbjct: 200 KKDSNAPKRAMTSFMFFSSDFRSKHSDLSIV------EMSKAAGAAWKELGPEERKVYEE 253
Query: 251 KALKDKERYRIEM 263
A KDKERY+ EM
Sbjct: 254 MAEKDKERYKREM 266
>gi|431914121|gb|ELK15380.1| TOX high mobility group box family member 3 [Pteropus alecto]
Length = 570
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 345 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 404
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 405 AKKEYLKALAAYRASL 420
>gi|49258306|pdb|1J3C|A Chain A, Solution Structure Of The C-Terminal Domain Of The Hmgb2
Length = 79
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 192 IKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQE 250
+K++DP PK S + F +E ++K HPG + ++ +GE+W++ +K Y++
Sbjct: 1 MKKKDPNAPKRPPSAFFLFCSEYRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQ 60
Query: 251 KALKDKERYRIEMEDYRER 269
KA K KE+Y ++ YR +
Sbjct: 61 KAAKLKEKYEKDIAAYRAK 79
>gi|397641752|gb|EJK74832.1| hypothetical protein THAOC_03468, partial [Thalassiosira oceanica]
Length = 599
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 173 ATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHP-GKDREISR 231
A A A SG ++ + K+RDPA PK ++ Y FF AE +K +P E+
Sbjct: 117 AGATASSGSEQGSVSINKKKKKRDPAAPKKPKNAYLFFCAETRPEIKASNPDATFGELQT 176
Query: 232 MIGELWNKLKESEKAVYQEKALKDKERYRIEMEDY 266
++G+ + +L +KA + + A DK RY E+E Y
Sbjct: 177 LLGKAYRELTPEDKAPFDKLAEADKLRYGQELERY 211
>gi|344235898|gb|EGV92001.1| TOX high mobility group box family member 3 [Cricetulus griseus]
Length = 300
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 171 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 230
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 231 AKKEYLKALAAYRASL 246
>gi|448084218|ref|XP_004195549.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
gi|359376971|emb|CCE85354.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
Length = 92
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 187 RKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEK 245
+K++ K++DP PK + S Y FF E ++ +PG ++ +++GE W + +K
Sbjct: 6 KKRASRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKAMTSDDK 65
Query: 246 AVYQEKALKDKERYRIEMEDY 266
Y+ KA DK+RY E +Y
Sbjct: 66 TPYESKAEADKKRYEKEKAEY 86
>gi|363755760|ref|XP_003648095.1| hypothetical protein Ecym_7459 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892131|gb|AET41278.1| hypothetical protein Ecym_7459 [Eremothecium cymbalariae
DBVPG#7215]
Length = 94
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK S Y FF E ++ +PG ++ R++GE W L + EK Y+ KA
Sbjct: 17 DPNAPKRAMSAYMFFANENRDIVRAENPGISFGQVGRVLGEKWKALSDDEKQPYEAKAEA 76
Query: 255 DKERYRIEMEDY 266
DK+RY E E Y
Sbjct: 77 DKKRYESEKELY 88
>gi|169409528|gb|ACA57879.1| High mobility group protein B3 (predicted) [Callicebus moloch]
Length = 193
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK SG+ F +E ++K + G ++++ +GE+WN L +S+K Y KA K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNLGISIGDVAKKLGEMWNNLNDSKKQPYITKAAK 148
Query: 255 DKERYRIEMEDYRERLK 271
KE+Y ++ DY+ + K
Sbjct: 149 LKEKYEKDVADYKSKGK 165
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 205 SGYNFFFA---EQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKDKERYRI 261
S Y FF E+H + P P E S+ E W + EK+ + E A DK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEAPVNFAEFSKKCPERWKIMSGKEKSKFDEMAKADKVRYDQ 73
Query: 262 EMEDY 266
EM+DY
Sbjct: 74 EMKDY 78
>gi|298706803|emb|CBJ29726.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 645
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 200 PKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALKDKER 258
PK S + F A++K +P K EIS+++GE W KL E++K YQ+KA +DK R
Sbjct: 553 PKGAMSAFMQFSQANRAQVKTDNPELKVTEISKVLGEKWGKLDETQKKPYQDKADEDKAR 612
Query: 259 YRIEMEDY 266
Y+ E + Y
Sbjct: 613 YKRERDAY 620
>gi|410925892|ref|XP_003976413.1| PREDICTED: TOX high mobility group box family member 4-like
[Takifugu rubripes]
Length = 656
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 301 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKNEA 360
Query: 255 DKERYRIEMEDYR 267
K+ Y + +YR
Sbjct: 361 AKKDYLKALAEYR 373
>gi|222087985|gb|ACM41855.1| high mobility group box 2-like protein [Epinephelus coioides]
Length = 212
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK S + F +E R+K PG + ++ +GELW+ EKA Y+ KA K
Sbjct: 87 DPNAPKRPPSAFFVFCSEHRPRIKEECPGISIGDTAKKLGELWSTQSSKEKAPYEAKAAK 146
Query: 255 DKERYRIEMEDYRERLKTGQ 274
KE+Y E+ YR + +G+
Sbjct: 147 LKEKYEKEVAAYRAKGVSGK 166
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 200 PKPNRSGYNFFFAEQHARLKPLHPGKD---REISRMIGELWNKLKESEKAVYQEKALKDK 256
P+ S Y FF A+ K HPG E S+ E W + EKA ++E A DK
Sbjct: 3 PRGKTSSYAFFIADCREEHKRKHPGTSVGFAEFSKKCSERWKTMSAKEKAKFEELAKTDK 62
Query: 257 ERYRIEMEDY 266
RY EM+ Y
Sbjct: 63 IRYDREMKTY 72
>gi|145492210|ref|XP_001432103.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399212|emb|CAK64706.1| unnamed protein product [Paramecium tetraurelia]
Length = 175
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 7/115 (6%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK +S + F+F ++ + + GK +EI+ MI + WN+L E+ YQ+++ +
Sbjct: 55 DPQAPKMPQSAFIFYFKAMRSKFQEENKGKQFQEITSMIAKKWNELSPFEQEPYQKRSEE 114
Query: 255 DKERYRIEMEDYRERLKTGQVISDAIPLQQRLPG--ADVDMVEVDTKLDETGGDS 307
D++RY E + Y + + Q S LQ++ G D D ++ K +E DS
Sbjct: 115 DRKRYNEEQKQY--SVISQQQFSKY--LQKKFKGDLRDSDKEDIQPKQEENEDDS 165
>gi|345319487|ref|XP_001520125.2| PREDICTED: TOX high mobility group box family member 3-like
[Ornithorhynchus anatinus]
Length = 780
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 459 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 518
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 519 AKKEYLKALAAYRASL 534
>gi|157129203|ref|XP_001655323.1| high mobility group B1, putative [Aedes aegypti]
gi|108872320|gb|EAT36545.1| AAEL011380-PA [Aedes aegypti]
Length = 278
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 195 RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKAL 253
+DP PK + S + +F ++ ++K L+P +I++ +G W+ + K+ Y++ A
Sbjct: 127 KDPNAPKRSLSAFFWFCHDERNKVKALNPEYGVGDIAKELGRKWSDMDAEVKSKYEQMAE 186
Query: 254 KDKERYRIEMEDYRERLKTGQVISDAIPL 282
KDK RY EM +Y+ + K Q PL
Sbjct: 187 KDKARYEQEMTEYKLKCKNEQGGGGGTPL 215
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 200 PKPNRSGYNFFFAEQHARLKPLHPGKD---REISRMIGELWNKLKESEKAVYQEKALKDK 256
P+ + Y FF K HP + E SR E W + + EK + E A KDK
Sbjct: 40 PRGRMTAYAFFVQTCREEHKKKHPEEQVIFAEFSRKCAERWKTMLDKEKQRFHEMAEKDK 99
Query: 257 ERYRIEMEDY 266
+RY +EM++Y
Sbjct: 100 QRYELEMQNY 109
>gi|133901992|ref|NP_001076772.1| Protein GEI-3, isoform a [Caenorhabditis elegans]
gi|22265919|emb|CAA90676.2| Protein GEI-3, isoform a [Caenorhabditis elegans]
Length = 1405
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 24/178 (13%)
Query: 182 QRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPL----HPGKD-REISRMIGEL 236
Q + R++S++ +P +P + F+++H +PL +P KD R +S+++GE
Sbjct: 826 QSAKERRRSKVSANEPHVRRPMNAF--MIFSKRH---RPLVHQQYPNKDNRTVSKILGEW 880
Query: 237 WNKLKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAI--------PLQQRLPG 288
W L +KA Y + A + KE + D++ K ++ S+++ PL+ ++
Sbjct: 881 WYSLAADQKAEYHKLATQVKEAHFKAHPDWKWSTKEKKIKSESLNTTPVALTPLKNKV-- 938
Query: 289 ADVDMVEVD----TKLDETGGDSPQTPDNESSSGVSDFEDDKTVEKDTEMEESPGVGL 342
D D+ D + +D T SP TP +S + + T + PG+ L
Sbjct: 939 FDFDIRTSDDLAKSFVDGTALLSPMTPMTPGASAFRHLSSRDSTQSSTSSFDFPGLPL 996
>gi|395503000|ref|XP_003755861.1| PREDICTED: TOX high mobility group box family member 4 [Sarcophilus
harrisii]
Length = 626
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 218 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 277
Query: 255 DKERYRIEMEDYRERLKTGQVISDAI 280
K+ Y + Y K QV A+
Sbjct: 278 AKKEYLKALAAY----KANQVCQTAV 299
>gi|167384542|ref|XP_001736998.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165900416|gb|EDR26737.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 112
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 197 PAHPKPNRSGYNFFFAEQHARLKPLHP-GKDREISRMIGELWNKLKESEKAVYQEKALKD 255
P PK ++ Y + E A +K HP K EI+++ E W L E EK YQ KA
Sbjct: 23 PNRPKRPQTPYFLYLHEHRASIKEEHPDAKVTEIAKIASEQWKALGEEEKKEYQAKADAA 82
Query: 256 KERYRIEMEDY 266
KE+Y+ +ME Y
Sbjct: 83 KEQYKKDMEKY 93
>gi|156097921|ref|XP_001614993.1| high mobility group protein [Plasmodium vivax Sal-1]
gi|148803867|gb|EDL45266.1| high mobility group protein, putative [Plasmodium vivax]
Length = 171
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHP--GKD-REISRMIGELWNKLKESEKAVYQEKA 252
DP PK S Y F+ ++ L P KD ++ +++GE W +L ++K Y++KA
Sbjct: 92 DPLAPKRALSAYMFYVKDKRLELIKERPELAKDVAQVGKLVGEAWGQLSAAQKTPYEKKA 151
Query: 253 LKDKERYRIEMEDYRE 268
DK RY E+E+YR+
Sbjct: 152 QLDKVRYSKEIEEYRK 167
>gi|444509487|gb|ELV09283.1| PDZ domain-containing protein GIPC3 [Tupaia chinensis]
Length = 804
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 181 VQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWNK 239
V++R K + K+ P PK +GY F E+ +++ HP EI++M+G W+K
Sbjct: 51 VKKRGWPKGKKRKKILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSK 110
Query: 240 LKESEKAVYQEKALKDKERYRIEMEDYRE 268
L+ +EK Y ++A ++K++Y E+ Y++
Sbjct: 111 LQPAEKQRYLDEAEREKQQYMKELRAYQQ 139
>gi|334326649|ref|XP_001364396.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related-like
[Monodelphis domestica]
Length = 503
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 197 PAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALKD 255
P PK +GY F E+ +++ LHP EI++M+G W+KL+ ++K Y ++A ++
Sbjct: 99 PNGPKAPVTGYVRFLNERREQIRTLHPDLPFPEITKMLGAEWSKLQPTDKQRYLDEAERE 158
Query: 256 KERYRIEMEDYRE 268
K++Y E+ +Y++
Sbjct: 159 KQQYMKELREYQQ 171
>gi|133901994|ref|NP_001076773.1| Protein GEI-3, isoform b [Caenorhabditis elegans]
gi|112982599|emb|CAL36516.1| Protein GEI-3, isoform b [Caenorhabditis elegans]
Length = 640
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 81/176 (46%), Gaps = 20/176 (11%)
Query: 182 QRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPL----HPGKD-REISRMIGEL 236
Q + R++S++ +P +P + F+++H +PL +P KD R +S+++GE
Sbjct: 61 QSAKERRRSKVSANEPHVRRPMNAF--MIFSKRH---RPLVHQQYPNKDNRTVSKILGEW 115
Query: 237 WNKLKESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAI--------PLQQRLPG 288
W L +KA Y + A + KE + D++ K ++ S+++ PL+ ++
Sbjct: 116 WYSLAADQKAEYHKLATQVKEAHFKAHPDWKWSTKEKKIKSESLNTTPVALTPLKNKVFD 175
Query: 289 ADVDMVE--VDTKLDETGGDSPQTPDNESSSGVSDFEDDKTVEKDTEMEESPGVGL 342
D+ + + +D T SP TP +S + + T + PG+ L
Sbjct: 176 FDIRTSDDLAKSFVDGTALLSPMTPMTPGASAFRHLSSRDSTQSSTSSFDFPGLPL 231
>gi|149028324|gb|EDL83740.1| rCG40749 [Rattus norvegicus]
Length = 1060
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL RL+V V GG+ ++ K ++W+E+ N ++++ AS + ++Y Q L
Sbjct: 380 LPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYL 439
Query: 61 L 61
Sbjct: 440 F 440
>gi|79151969|gb|AAI08004.1| LOC559853 protein, partial [Danio rerio]
Length = 683
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 294 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 353
Query: 255 DKERYRIEMEDYR 267
K+ Y + YR
Sbjct: 354 AKKDYLKALAAYR 366
>gi|395513091|ref|XP_003760763.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-related
[Sarcophilus harrisii]
Length = 323
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 181 VQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWNK 239
V++R K + K+ P PK +GY F E+ +++ LHP EI++M+G W+K
Sbjct: 57 VKKRGWPKGKKRKKILPNGPKAPVTGYVRFLNERREQIRTLHPDLPFPEITKMLGAEWSK 116
Query: 240 LKESEKAVYQEKALKDKERYRIEMEDYRE 268
L+ ++K Y ++A ++K++Y E+ +Y++
Sbjct: 117 LQPTDKQRYLDEAEREKQQYMKELREYQQ 145
>gi|45187563|ref|NP_983786.1| ADL310Wp [Ashbya gossypii ATCC 10895]
gi|74694642|sp|Q75B82.1|NHP6_ASHGO RecName: Full=Non-histone chromosomal protein 6
gi|44982301|gb|AAS51610.1| ADL310Wp [Ashbya gossypii ATCC 10895]
gi|374106998|gb|AEY95906.1| FADL310Wp [Ashbya gossypii FDAG1]
Length = 94
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK S Y FF E ++ +PG ++ R++GE W L + EK Y+ KA
Sbjct: 17 DPNAPKRAMSAYMFFANENRDIVRAENPGISFGQVGRVLGEKWKALSDDEKQPYEAKAEA 76
Query: 255 DKERYRIEMEDY 266
DK+RY E E Y
Sbjct: 77 DKKRYESEKELY 88
>gi|448079731|ref|XP_004194450.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
gi|359375872|emb|CCE86454.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
Length = 92
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 187 RKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEK 245
+K++ K++DP PK + S Y FF E ++ +PG ++ +++GE W + +K
Sbjct: 6 KKRASRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKAMSSEDK 65
Query: 246 AVYQEKALKDKERYRIEMEDY 266
Y+ KA DK+RY E +Y
Sbjct: 66 TPYETKAEADKKRYEKEKAEY 86
>gi|344245608|gb|EGW01712.1| High mobility group protein B1 [Cricetulus griseus]
Length = 162
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 189 KSEIKRR--DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEK 245
K E K++ DP PK S + F +E H ++K PG + ++ +GE WN +K
Sbjct: 31 KGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGERPGLSIGDAAKKLGETWNSTAAEDK 90
Query: 246 AVYQEKALKDKERYRIEMEDYRERLK 271
Y+ KA K KE+Y ++ DYR + K
Sbjct: 91 QPYETKAAKLKEQYEKDIADYRAKGK 116
>gi|321259756|ref|XP_003194598.1| nonhistone protein 6 [Cryptococcus gattii WM276]
gi|317461070|gb|ADV22811.1| Nonhistone protein 6, putative [Cryptococcus gattii WM276]
Length = 110
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 190 SEIKRR---DPAHPKPNRSGYNFFFAEQHARLKPLHP-GKDREISRMIGELWNKLKESEK 245
S+ KRR DP PK S Y FF + R+K +P ++ +++G W ++ E+EK
Sbjct: 15 SDAKRRSKKDPNKPKRALSAYMFFVQDYRERIKAENPEATFGDVGKLLGIKWREMNENEK 74
Query: 246 AVYQEKALKDKERYRIEMEDYRERLKTGQVISDA 279
Y+ KA DKER E DY+ K + S A
Sbjct: 75 KPYEAKAKADKERADRENADYKAEGKASKKASKA 108
>gi|47551063|ref|NP_999708.1| high mobility group protein 1 homolog [Strongylocentrotus
purpuratus]
gi|729735|sp|P40644.1|HMGH_STRPU RecName: Full=High mobility group protein 1 homolog
gi|161521|gb|AAA91277.1| high mobility group 1 protein [Strongylocentrotus purpuratus]
Length = 200
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 193 KRRDPAHPKPNRSGYNFFFAE---QHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQ 249
K RD + P+ S Y +F + +H + P P + E S+ W L+E K V+
Sbjct: 4 KDRDSSKPRGRMSAYAYFVQDSRAEHGKNHPNSPVRFAEFSKDCSARWKALEEKGKGVFH 63
Query: 250 EKALKDKERYRIEMEDYR 267
EK+++DK RY EM+ Y+
Sbjct: 64 EKSMRDKVRYDREMQSYK 81
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK N S + F E A +K +HP +I++ + W + EK + + A K
Sbjct: 96 DPDAPKRNLSAFFIFSGENRAAIKSVHPNWSVGDIAKELAVRWRAMTAGEKIPFDKGAAK 155
Query: 255 DKERYRIEMEDYRERLK 271
DKERY M +Y+ + K
Sbjct: 156 DKERYIKAMAEYKAKAK 172
>gi|326669485|ref|XP_001922515.3| PREDICTED: TOX high mobility group box family member 3 [Danio
rerio]
Length = 590
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 263 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVYKSKTEA 322
Query: 255 DKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 323 AKKEYLKALAAYRASL 338
>gi|15228471|ref|NP_189515.1| FACT complex subunit SSRP1 [Arabidopsis thaliana]
gi|26454672|sp|Q05153.2|SSRP1_ARATH RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=High mobility group B protein 8; AltName:
Full=Nucleosome/chromatin assembly factor group D 08;
Short=Nucleosome/chromatin assembly factor group D 8;
AltName: Full=Recombination signal sequence recognition
protein 1
gi|11994780|dbj|BAB03170.1| structure-specific recognition protein 1 (HMG1 DNA-binding protein)
[Arabidopsis thaliana]
gi|27311803|gb|AAO00867.1| recombination signal sequence recognition protein, putative
[Arabidopsis thaliana]
gi|332643963|gb|AEE77484.1| FACT complex subunit SSRP1 [Arabidopsis thaliana]
Length = 646
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 205 SGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALKDKERYRIEM 263
SG+ FF + +K HPG E+ +++G+ W ++ +K Y+ KA DK+RY+ E+
Sbjct: 567 SGFMFFSQMERDNIKKEHPGIAFGEVGKVLGDKWRQMSADDKEPYEAKAQVDKQRYKDEI 626
Query: 264 EDYR 267
DY+
Sbjct: 627 SDYK 630
>gi|327278594|ref|XP_003224046.1| PREDICTED: TOX high mobility group box family member 3-like [Anolis
carolinensis]
Length = 347
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 231 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 290
Query: 255 DKERYRIEMEDYRERLKTGQVISDAIPLQQRL 286
K+ Y + YR L + ++A+ L Q L
Sbjct: 291 AKKEYLKALAAYRASLVSK---TNAVELVQLL 319
>gi|292610859|ref|XP_001921001.2| PREDICTED: TOX high mobility group box family member 4 [Danio
rerio]
Length = 685
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 296 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 355
Query: 255 DKERYRIEMEDYR 267
K+ Y + YR
Sbjct: 356 AKKDYLKALAAYR 368
>gi|170580208|ref|XP_001895163.1| structure-specific recognition protein 1 [Brugia malayi]
gi|158597991|gb|EDP35988.1| structure-specific recognition protein 1, putative [Brugia malayi]
Length = 689
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALKD 255
DP PK +S Y +F E +A K E ++ G++W ++ E K Y+E+A +D
Sbjct: 550 DPNAPKKPQSAYFIWFGENYASFKK-EGVSVTEAAQRAGKMWKEIDEETKKKYEERAKED 608
Query: 256 KERYRIEMEDY 266
KERY EM++Y
Sbjct: 609 KERYAREMKEY 619
>gi|432951224|ref|XP_004084757.1| PREDICTED: high mobility group protein B2-like [Oryzias latipes]
Length = 221
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Query: 175 AHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD---REISR 231
A V + R ++ E +DP P+ S Y +F A K HPG E S+
Sbjct: 6 ASEARSVAEKARLRQIEAMTKDPNKPRGKTSAYAYFVATCREEHKKKHPGTSVNFAEFSK 65
Query: 232 MIGELWNKLKESEKAVYQEKALKDKERYRIEMEDY 266
E W + EK + E A DK RY EM+ Y
Sbjct: 66 KCSERWKTMSSKEKVKFDELAKTDKARYDREMKTY 100
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK S + F ++ ++K +PG +I++ +GELW +KA Y+ KA K
Sbjct: 114 DPNAPKRPPSAFFVFCSDHRPKIKEDNPGISIGDIAKKLGELWATQSAKDKAPYEAKAAK 173
Query: 255 DKERYRIEMEDYRERLKTGQVISDAIPLQQ 284
KE+Y ++ YR + +G+ SD + LQ+
Sbjct: 174 LKEKYEKDVAAYRAKGGSGK--SDELKLQE 201
>gi|400599237|gb|EJP66941.1| HMG box protein [Beauveria bassiana ARSEF 2860]
Length = 96
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 194 RRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKA 252
++DP PK S Y FF EQ ++ +PG ++ +++GE W L + ++ Y+ KA
Sbjct: 20 KKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQRTPYEAKA 79
Query: 253 LKDKERYRIEMEDY 266
DK+RY E Y
Sbjct: 80 AADKKRYEDEKAAY 93
>gi|50548527|ref|XP_501733.1| YALI0C11671p [Yarrowia lipolytica]
gi|74635076|sp|Q6CC79.1|NHP6_YARLI RecName: Full=Non-histone chromosomal protein 6
gi|49647600|emb|CAG82043.1| YALI0C11671p [Yarrowia lipolytica CLIB122]
Length = 103
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALK 254
DP PK S Y FF + ++ +PG ++ + +GE W L ++EK Y+EKA
Sbjct: 21 DPNAPKRALSAYMFFANDNRDAIRADNPGIAFGQVGKALGEKWKTLTDAEKVPYEEKATA 80
Query: 255 DKERYRIEMEDYR 267
DK+RY E Y+
Sbjct: 81 DKKRYEDEKAAYK 93
>gi|390468842|ref|XP_002753818.2| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Callithrix jacchus]
Length = 595
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 193 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 252
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 253 AKKEYLKALAAYKD 266
>gi|441618163|ref|XP_003271355.2| PREDICTED: high mobility group protein B3-like [Nomascus
leucogenys]
Length = 206
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP PK +SG+ F +E ++K PG ++++ +GE+WN L +SEK Y KA K
Sbjct: 95 DPNAPKMPQSGFFLFCSEFCLKIKSTKPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 154
Query: 255 DKERYRIEMEDYRERLK 271
K Y ++ DY+ + K
Sbjct: 155 LK--YEKDVADYKSKGK 169
>gi|121483890|gb|ABM54245.1| HMG20A [Pan paniscus]
Length = 194
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR-EISRMIGELWNKLKESEKAVYQEKALK 254
D PK +GY F E+ +L+ P EI+RM+G W+KL EK Y ++A +
Sbjct: 99 DSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADR 158
Query: 255 DKERYRIEMEDYR 267
DKERY E+E Y+
Sbjct: 159 DKERYMKELEQYQ 171
>gi|297815172|ref|XP_002875469.1| high mobility group, structure-specific recognition protein 1
[Arabidopsis lyrata subsp. lyrata]
gi|297321307|gb|EFH51728.1| high mobility group, structure-specific recognition protein 1
[Arabidopsis lyrata subsp. lyrata]
Length = 645
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 205 SGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEKALKDKERYRIEM 263
SG+ +F + +K HPG E+ +++G+ W ++ EK Y+ KA DK+RY+ E+
Sbjct: 566 SGFMYFSQMERDNIKKEHPGIAFGEVGKVLGDKWRQMSAEEKEPYEAKAQVDKQRYKDEI 625
Query: 264 EDYR 267
DY+
Sbjct: 626 SDYK 629
>gi|357604632|gb|EHJ64272.1| putative high mobility group protein [Danaus plexippus]
Length = 818
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 195 RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKAL 253
RDP P+ S Y FF + A +K +P E+S+++ +W+ L K+VY++K
Sbjct: 411 RDPNEPQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQKTE 470
Query: 254 KDKERYRIEMEDYRERL 270
K+ Y + YR L
Sbjct: 471 VAKKEYLKALAAYRASL 487
>gi|296214431|ref|XP_002753819.1| PREDICTED: TOX high mobility group box family member 4 isoform 2
[Callithrix jacchus]
Length = 598
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 196 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 255
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 256 AKKEYLKALAAYKD 269
>gi|429855216|gb|ELA30184.1| hmg box protein [Colletotrichum gloeosporioides Nara gc5]
Length = 468
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 19/143 (13%)
Query: 191 EIKRRDPAHPKPNR-------SGYNFFFAEQHARLKPLHPGKD---REISRMIGELWNKL 240
+ KR+ HPKP+ S Y F + LK G++ EI++++GE W L
Sbjct: 100 QAKRKYRRHPKPDENAPERPPSAYVLFSNKMRDELK----GRNLTFTEIAKLVGEHWQNL 155
Query: 241 KESEKAVYQEKALKDKERYRIEMEDYRERLKTGQVISDAIPLQQRLPGAD-----VDMVE 295
+EK Y+ ALK KE+Y ++ +Y++ + + + + R A+ +
Sbjct: 156 TPAEKEPYETSALKAKEKYNHDLAEYKKTPEFRKYTAYLADFKARQASANQAKESSKRQK 215
Query: 296 VDTKLDETGGDSPQTPDNESSSG 318
+D+ + T G + TP + SS+G
Sbjct: 216 LDSGVRLTNGSASATPGSLSSTG 238
>gi|383847420|ref|XP_003699352.1| PREDICTED: uncharacterized protein LOC100875697 [Megachile
rotundata]
Length = 663
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 183 RRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLK 241
+R+ + + + K+RDP P+ S Y FF + A +K +P E+S+++ +W+ L
Sbjct: 302 QRKSKAQKKKKKRDPNEPQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDALD 361
Query: 242 ESEKAVYQEKALKDKERYRIEMEDYRERL 270
K VY++K K+ Y + YR L
Sbjct: 362 TEHKNVYKQKTEAAKKEYLQALAAYRASL 390
>gi|205539816|sp|P0C6E5.1|HG3BL_HUMAN RecName: Full=Putative high mobility group protein B3-like protein
Length = 187
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKESEKAVYQEK 251
K++DP PK SG+ F +E + K +PG ++++ +GE+W L +SEK Y +
Sbjct: 85 KKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPYITQ 144
Query: 252 ALKDKERYRIEMEDYRERLKTGQVISDAIPLQQRL 286
A K KE+Y ++ Y+ + K+ A Q+++
Sbjct: 145 AAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKV 179
>gi|302814252|ref|XP_002988810.1| hypothetical protein SELMODRAFT_159743 [Selaginella moellendorffii]
gi|300143381|gb|EFJ10072.1| hypothetical protein SELMODRAFT_159743 [Selaginella moellendorffii]
Length = 647
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 197 PAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALKD 255
P PK SG+ +F + LK PG +++++ +GE W + + EK ++ +A D
Sbjct: 561 PNAPKRALSGFMYFSLAERENLKKSTPGISFKDVAKTLGERWKAMSKDEKEPFESQARVD 620
Query: 256 KERYRIEMEDYRERLKTGQVISD 278
KERY +M+ Y + G D
Sbjct: 621 KERYTKQMQGYNKGNAGGSTADD 643
>gi|355563197|gb|EHH19759.1| hypothetical protein EGK_02478, partial [Macaca mulatta]
Length = 121
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEK 251
K DP PK SG+ F +E H ++K +PG ++++ +GE+W L +SEK Y K
Sbjct: 23 KNNDPNAPKRPLSGFFLFCSEFHPKMKSTNPGISIGDVAKKLGEMWKNLNDSEKQPYVTK 82
Query: 252 ALKDKERYRIEMEDYRERLK 271
K +Y ++ DY+ + K
Sbjct: 83 VAK-LMKYEKDVADYKSKGK 101
>gi|348577217|ref|XP_003474381.1| PREDICTED: TOX high mobility group box family member 4-like [Cavia
porcellus]
Length = 619
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|345780986|ref|XP_864251.2| PREDICTED: TOX high mobility group box family member 4 isoform 4
[Canis lupus familiaris]
Length = 596
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 196 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 255
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 256 AKKEYLKALAAYKD 269
>gi|302762326|ref|XP_002964585.1| hypothetical protein SELMODRAFT_166865 [Selaginella moellendorffii]
gi|300168314|gb|EFJ34918.1| hypothetical protein SELMODRAFT_166865 [Selaginella moellendorffii]
Length = 647
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 197 PAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALKD 255
P PK SG+ +F + LK PG +++++ +GE W + + EK ++ +A D
Sbjct: 561 PNAPKRALSGFMYFSLAERENLKKSTPGISFKDVAKTLGERWKAMSKDEKEPFESQARVD 620
Query: 256 KERYRIEMEDYRERLKTGQVISD 278
KERY +M+ Y + G D
Sbjct: 621 KERYTKQMQGYNKGNAGGSTADD 643
>gi|50510609|dbj|BAD32290.1| mKIAA0737 protein [Mus musculus]
Length = 627
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 227 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 286
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 287 AKKEYLKALAAYKD 300
>gi|299741148|ref|XP_001834261.2| non-histone chromosomal protein 6 [Coprinopsis cinerea
okayama7#130]
gi|298404577|gb|EAU87573.2| non-histone chromosomal protein 6 [Coprinopsis cinerea
okayama7#130]
Length = 184
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 194 RRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKA 252
++DP PK S Y FF + R+K +P E+ +++G W +L E EK Y E A
Sbjct: 90 KKDPLKPKRALSAYMFFSQDWRERIKAENPDAGFGEVGKLLGAKWKELDEEEKKPYIELA 149
Query: 253 LKDKERYRIEMEDYRERLKTGQVIS 277
KDKER E Y + +K + S
Sbjct: 150 NKDKERAENEKSAYDKGIKKSRANS 174
>gi|269861952|ref|XP_002650646.1| chromatin-associated protein [Enterocytozoon bieneusi H348]
gi|269866178|ref|XP_002652183.1| chromatin-associated protein [Enterocytozoon bieneusi H348]
gi|209779275|gb|ACI87872.1| high mobility group protein [Enterocytozoon bieneusi]
gi|220063003|gb|EED41873.1| chromatin-associated protein [Enterocytozoon bieneusi H348]
gi|220065832|gb|EED43409.1| chromatin-associated protein [Enterocytozoon bieneusi H348]
Length = 171
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 195 RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKESEKAVYQEKALK 254
+D PK S Y F E + K E ++ IGE WN L E+EK+ Y++KA++
Sbjct: 9 KDKNAPKKPCSSYMLFGHELRKNDATIKALKVTEQAKQIGERWNALTEAEKSEYEKKAME 68
Query: 255 DKERYRIEME------DYRERLKT 272
KE+Y E+E +Y+E +KT
Sbjct: 69 AKEKYNKELEIYKTTDEYKEYMKT 92
>gi|432090334|gb|ELK23762.1| TOX high mobility group box family member 4 [Myotis davidii]
Length = 654
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 256 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 315
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 316 AKKEYLKALAAYKD 329
>gi|431898745|gb|ELK07122.1| TOX high mobility group box family member 4 [Pteropus alecto]
Length = 597
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 197 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 256
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 257 AKKEYLKALAAYKD 270
>gi|392334607|ref|XP_003753222.1| PREDICTED: AT-rich interactive domain-containing protein 1B,
partial [Rattus norvegicus]
Length = 1985
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 1 IPIIGGKELDLHRLFVEVTARGGIEKIIKERRWKEVTAIFNFPSTATNASFVLRKYYQSL 60
+P +G K LDL RL+V V GG+ ++ K ++W+E+ N ++++ AS + ++Y Q L
Sbjct: 867 LPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYL 926
Query: 61 L 61
Sbjct: 927 F 927
>gi|391325154|ref|XP_003737104.1| PREDICTED: high mobility group protein 20A-like [Metaseiulus
occidentalis]
Length = 391
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
Query: 174 TAHAVSGVQRRRRRKK--SEIKRR----DPAHPKPNRSGYNFFFAEQHARLKPLHPG-KD 226
T + G +RR R K +E KRR D PK +GY F E R + ++P
Sbjct: 75 TENTTPGQKRRGRPPKPGNERKRRPRAKDVNAPKAPINGYVRFLNENRERCRKVNPEVAF 134
Query: 227 REISRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRE 268
I++++ + W++LK+ +K Y + A KD+ERY E+E+Y++
Sbjct: 135 ANITKLLAQEWSQLKQEDKQKYLDAAEKDRERYMKEVEEYQQ 176
>gi|403264245|ref|XP_003924400.1| PREDICTED: TOX high mobility group box family member 4 isoform 3
[Saimiri boliviensis boliviensis]
Length = 595
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 193 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 252
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 253 AKKEYLKALAAYKD 266
>gi|402875602|ref|XP_003901589.1| PREDICTED: TOX high mobility group box family member 4 isoform 2
[Papio anubis]
gi|441667208|ref|XP_004091956.1| PREDICTED: TOX high mobility group box family member 4 isoform 2
[Nomascus leucogenys]
Length = 598
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 196 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 255
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 256 AKKEYLKALAAYKD 269
>gi|291403500|ref|XP_002717936.1| PREDICTED: epidermal Langerhans cell protein LCP1 [Oryctolagus
cuniculus]
Length = 644
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 244 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 303
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 304 AKKEYLKALAAYKD 317
>gi|119596659|gb|EAW76253.1| hCG2042470 [Homo sapiens]
Length = 118
Score = 46.6 bits (109), Expect = 0.023, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 194 RRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKA 252
+ DP PK SG+ F +E ++K +PG ++++ +GE+WN L +SEK Y K
Sbjct: 11 KNDPNAPKRPLSGFFLFCSEFCPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKV 70
Query: 253 LKDKERYRIEMEDYRERLK 271
K K +Y ++ DY+ + K
Sbjct: 71 AKLK-KYEKDVADYKSKGK 88
>gi|148707462|gb|EDL39409.1| mCG8212 [Mus musculus]
Length = 145
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 193 KRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEK 251
K++DP PK SG+ F +E H ++K +PG ++++ +GE+W L +SE A Y K
Sbjct: 34 KKKDPNAPKRPPSGFFLFCSEFHPKIKFTNPGISIGDVAKKLGEMWKNLSDSE-AAYVTK 92
Query: 252 ALKDKERYRIEMEDYRERLK 271
A K KE+ + D++ + K
Sbjct: 93 AAKLKEKDEKGVSDWQSKGK 112
>gi|40788344|dbj|BAA34457.2| KIAA0737 protein [Homo sapiens]
Length = 629
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 227 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 286
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 287 AKKEYLKALAAYKD 300
>gi|255715687|ref|XP_002554125.1| KLTH0E14850p [Lachancea thermotolerans]
gi|238935507|emb|CAR23688.1| KLTH0E14850p [Lachancea thermotolerans CBS 6340]
Length = 93
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 184 RRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKE 242
R +K++ +++DP PK S Y FF E ++ +PG ++ R++G+ W L +
Sbjct: 5 REAKKRTTRRKKDPNAPKRALSAYMFFANENRDIVRAENPGVTFGQVGRLLGDKWKALTD 64
Query: 243 SEKAVYQEKALKDKERYRIEMEDY 266
EK Y+ K DK+RY E E Y
Sbjct: 65 EEKQPYEAKHAADKKRYESEKELY 88
>gi|29748100|gb|AAH50091.1| TOX high mobility group box family member 4 [Mus musculus]
Length = 619
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|73977370|ref|XP_532626.2| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Canis lupus familiaris]
Length = 619
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|12656035|gb|AAK00713.1|AF228408_1 epidermal Langerhans cell protein LCP1 [Mus musculus]
Length = 619
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|402875604|ref|XP_003901590.1| PREDICTED: TOX high mobility group box family member 4 isoform 3
[Papio anubis]
gi|441667216|ref|XP_004091957.1| PREDICTED: TOX high mobility group box family member 4 isoform 3
[Nomascus leucogenys]
Length = 595
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 193 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 252
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 253 AKKEYLKALAAYKD 266
>gi|397466077|ref|XP_003804799.1| PREDICTED: TOX high mobility group box family member 4 isoform 3
[Pan paniscus]
Length = 594
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 193 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 252
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 253 AKKEYLKALAAYKD 266
>gi|395861632|ref|XP_003803085.1| PREDICTED: TOX high mobility group box family member 4 isoform 3
[Otolemur garnettii]
Length = 594
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 193 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 252
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 253 AKKEYLKALAAYKD 266
>gi|166706895|ref|NP_075923.2| TOX high mobility group box family member 4 [Mus musculus]
gi|342187130|sp|Q8BU11.3|TOX4_MOUSE RecName: Full=TOX high mobility group box family member 4; AltName:
Full=Epidermal Langerhans cell protein LCP1
gi|74150964|dbj|BAE27616.1| unnamed protein product [Mus musculus]
gi|74190752|dbj|BAE28170.1| unnamed protein product [Mus musculus]
Length = 619
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|332841826|ref|XP_003314295.1| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Pan troglodytes]
Length = 621
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|417412008|gb|JAA52420.1| Putative hmg box-containing protein, partial [Desmodus rotundus]
Length = 625
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 225 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 284
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 285 AKKEYLKALAAYKD 298
>gi|397466075|ref|XP_003804798.1| PREDICTED: TOX high mobility group box family member 4 isoform 2
[Pan paniscus]
Length = 597
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 196 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 255
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 256 AKKEYLKALAAYKD 269
>gi|395861630|ref|XP_003803084.1| PREDICTED: TOX high mobility group box family member 4 isoform 2
[Otolemur garnettii]
Length = 597
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 196 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 255
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 256 AKKEYLKALAAYKD 269
>gi|390468839|ref|XP_003734010.1| PREDICTED: TOX high mobility group box family member 4 [Callithrix
jacchus]
Length = 621
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|410208198|gb|JAA01318.1| TOX high mobility group box family member 4 [Pan troglodytes]
gi|410251418|gb|JAA13676.1| TOX high mobility group box family member 4 [Pan troglodytes]
gi|410298720|gb|JAA27960.1| TOX high mobility group box family member 4 [Pan troglodytes]
gi|410340637|gb|JAA39265.1| TOX high mobility group box family member 4 [Pan troglodytes]
Length = 621
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|321478856|gb|EFX89813.1| hypothetical protein DAPPUDRAFT_232871 [Daphnia pulex]
Length = 190
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 9/91 (9%)
Query: 185 RRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHP----GKDREISRMIGELWNKL 240
R RK+ ++K DP PK + S + +F ++ +K HP G +I++ +G+ W ++
Sbjct: 89 RGRKRKQVK--DPNAPKRSLSAFFWFCNDERGNVKAAHPEYTVG---DIAKDLGKQWGEV 143
Query: 241 KESEKAVYQEKALKDKERYRIEMEDYRERLK 271
ES K+ Y+ A KDK RY E Y+++LK
Sbjct: 144 DESTKSKYEAMAEKDKARYERENNAYKKKLK 174
Score = 37.7 bits (86), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD---REISRMIGELWNKLKESEKAVYQEKA 252
D P+ + Y FF K HP ++ E S+ E W + + EK +QE A
Sbjct: 7 DANKPRGRMTAYAFFVQTCREEHKKKHPDENVVFSEFSKKCAERWKTMSDKEKKRFQEMA 66
Query: 253 LKDKERYRIEMEDY 266
+DK R+ EM Y
Sbjct: 67 ERDKVRFDDEMRHY 80
>gi|289063374|ref|NP_001165884.1| TOX high mobility group box family member 4 [Macaca mulatta]
gi|332223460|ref|XP_003260888.1| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Nomascus leucogenys]
gi|402875600|ref|XP_003901588.1| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Papio anubis]
gi|224493433|sp|Q5R6A9.2|TOX4_PONAB RecName: Full=TOX high mobility group box family member 4
gi|380784003|gb|AFE63877.1| TOX high mobility group box family member 4 [Macaca mulatta]
gi|383423311|gb|AFH34869.1| TOX high mobility group box family member 4 [Macaca mulatta]
gi|383423313|gb|AFH34870.1| TOX high mobility group box family member 4 [Macaca mulatta]
Length = 621
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|426232810|ref|XP_004010413.1| PREDICTED: TOX high mobility group box family member 4 isoform 2
[Ovis aries]
Length = 596
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 196 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 255
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 256 AKKEYLKALAAYKD 269
>gi|74142195|dbj|BAE31864.1| unnamed protein product [Mus musculus]
Length = 619
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|156083745|ref|XP_001609356.1| high mobility group protein-like protein NHP1 [Babesia bovis T2Bo]
gi|730136|sp|P40632.1|NHP1_BABBO RecName: Full=High mobility group protein homolog NHP1
gi|344189439|pdb|2LHJ|A Chain A, Nmr Structure Of The High Mobility Group Protein-Like
Protein Nhp1 From Babesia Bovis T2bo (Baboa.00841.A)
gi|155890|gb|AAA27799.1| non-histone protein [Babesia bovis]
gi|154796607|gb|EDO05788.1| high mobility group protein-like protein NHP1 [Babesia bovis]
Length = 97
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 173 ATAHAVSGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHP--GKD-REI 229
A A +GV+R R+ KK DP PK S Y FF E+ + +P KD I
Sbjct: 2 AGASDRTGVRRPRKAKK------DPNAPKRALSSYMFFAKEKRVEIIAENPEIAKDVAAI 55
Query: 230 SRMIGELWNKLKESEKAVYQEKALKDKERYRIEMEDYRER 269
+MIG WN L + EK Y+ + +D+ RY E +Y +R
Sbjct: 56 GKMIGAAWNALSDEEKKPYERMSDEDRVRYEREKAEYAQR 95
>gi|403264241|ref|XP_003924398.1| PREDICTED: TOX high mobility group box family member 4 isoform 1
[Saimiri boliviensis boliviensis]
Length = 621
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|354491199|ref|XP_003507743.1| PREDICTED: TOX high mobility group box family member 4-like
[Cricetulus griseus]
gi|344252329|gb|EGW08433.1| TOX high mobility group box family member 4 [Cricetulus griseus]
Length = 619
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 279 AKKEYLKALAAYKD 292
>gi|426376298|ref|XP_004054941.1| PREDICTED: TOX high mobility group box family member 4 isoform 2
[Gorilla gorilla gorilla]
gi|194391264|dbj|BAG60750.1| unnamed protein product [Homo sapiens]
Length = 598
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 196 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLKESEKAVYQEKALK 254
DP P+ S Y FF + A +K +P E+S+++ +W+ L E +K VY+ K
Sbjct: 196 DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 255
Query: 255 DKERYRIEMEDYRE 268
K+ Y + Y++
Sbjct: 256 AKKEYLKALAAYKD 269
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.131 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,520,036,928
Number of Sequences: 23463169
Number of extensions: 289927104
Number of successful extensions: 867231
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2055
Number of HSP's successfully gapped in prelim test: 3111
Number of HSP's that attempted gapping in prelim test: 859643
Number of HSP's gapped (non-prelim): 8141
length of query: 388
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 244
effective length of database: 8,980,499,031
effective search space: 2191241763564
effective search space used: 2191241763564
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 78 (34.7 bits)