BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046370
(72 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224126997|ref|XP_002319981.1| predicted protein [Populus trichocarpa]
gi|222858357|gb|EEE95904.1| predicted protein [Populus trichocarpa]
Length = 72
Score = 137 bits (346), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 64/72 (88%), Positives = 67/72 (93%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGKQPVRMKAVVYALSPFQQK+MPGLWKDL GKIHHKVS+NWIS LLLGPLVG Y YVQ
Sbjct: 1 MGKQPVRMKAVVYALSPFQQKVMPGLWKDLPGKIHHKVSENWISATLLLGPLVGVYTYVQ 60
Query: 61 NYQEKEKLAHRY 72
NYQEKEKL+HRY
Sbjct: 61 NYQEKEKLSHRY 72
>gi|225454551|ref|XP_002263013.1| PREDICTED: cytochrome b-c1 complex subunit 8 [Vitis vinifera]
gi|297737194|emb|CBI26395.3| unnamed protein product [Vitis vinifera]
Length = 72
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/72 (83%), Positives = 66/72 (91%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGK PVRMKAVVY+LSPFQQ+IMPGLWKDLT KIHHKV++NWIS LLL PL+GTY+YVQ
Sbjct: 1 MGKTPVRMKAVVYSLSPFQQQIMPGLWKDLTTKIHHKVTENWISATLLLAPLIGTYSYVQ 60
Query: 61 NYQEKEKLAHRY 72
NYQEKEKL HRY
Sbjct: 61 NYQEKEKLEHRY 72
>gi|224145402|ref|XP_002325629.1| predicted protein [Populus trichocarpa]
gi|118484575|gb|ABK94161.1| unknown [Populus trichocarpa]
gi|118487047|gb|ABK95354.1| unknown [Populus trichocarpa]
gi|222862504|gb|EEF00011.1| predicted protein [Populus trichocarpa]
Length = 72
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/72 (84%), Positives = 65/72 (90%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGKQPV++KAVVYALSPFQQK+MPGLWKDL GKIHHKVS+NWIS LLL PLVG Y YVQ
Sbjct: 1 MGKQPVKLKAVVYALSPFQQKVMPGLWKDLPGKIHHKVSENWISATLLLAPLVGVYTYVQ 60
Query: 61 NYQEKEKLAHRY 72
NYQEKEKL HRY
Sbjct: 61 NYQEKEKLEHRY 72
>gi|282848248|gb|ADB02905.1| cytochrome b-c1 complex subunit 8 [Jatropha curcas]
Length = 72
Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/72 (84%), Positives = 65/72 (90%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGKQPVRMKAVVYALSPFQQKIMPGLWKDL KIHHKVS+NWIS LLL PL+GTY +VQ
Sbjct: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLPNKIHHKVSENWISATLLLTPLIGTYTHVQ 60
Query: 61 NYQEKEKLAHRY 72
NYQEKEKL HR+
Sbjct: 61 NYQEKEKLEHRF 72
>gi|225434303|ref|XP_002264389.1| PREDICTED: cytochrome b-c1 complex subunit 8 [Vitis vinifera]
gi|297745740|emb|CBI15796.3| unnamed protein product [Vitis vinifera]
Length = 72
Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/72 (83%), Positives = 65/72 (90%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGK PVRMKAVVY+LSPFQQ+IMPGLWKDLT KIHHKV+DNWIS LLL PLVGTY YVQ
Sbjct: 1 MGKTPVRMKAVVYSLSPFQQQIMPGLWKDLTTKIHHKVTDNWISATLLLAPLVGTYTYVQ 60
Query: 61 NYQEKEKLAHRY 72
N++EKEKL HRY
Sbjct: 61 NFKEKEKLEHRY 72
>gi|1174867|sp|P46269.2|QCR8_SOLTU RecName: Full=Cytochrome b-c1 complex subunit 8; AltName:
Full=Complex III subunit 8; AltName: Full=Complex III
subunit VII; AltName: Full=Ubiquinol-cytochrome c
reductase complex 8.2 kDa protein; AltName:
Full=Ubiquinol-cytochrome c reductase complex
ubiquinone-binding protein QP-C
gi|633687|emb|CAA55862.1| ubiquinol--cytochrome c reductase [Solanum tuberosum]
gi|1094912|prf||2107179A cytochrome c oxidase:SUBUNIT=8.2kD
Length = 72
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/72 (83%), Positives = 67/72 (93%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGKQPV++KAVVYA+SPFQQKIMPGLWKDL GKIHHKVS+NWIS LLLGPLVGTY+YVQ
Sbjct: 1 MGKQPVKLKAVVYAISPFQQKIMPGLWKDLPGKIHHKVSENWISATLLLGPLVGTYSYVQ 60
Query: 61 NYQEKEKLAHRY 72
++ EKEKL HRY
Sbjct: 61 HFLEKEKLEHRY 72
>gi|449450456|ref|XP_004142978.1| PREDICTED: cytochrome b-c1 complex subunit 8-like [Cucumis
sativus]
gi|449500324|ref|XP_004161066.1| PREDICTED: cytochrome b-c1 complex subunit 8-like [Cucumis
sativus]
Length = 72
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/72 (79%), Positives = 65/72 (90%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGKQPVRMKAVVYALSPFQQKIM GLW DL+GKIHHK+S+NWIS LL+ P+VG+Y YVQ
Sbjct: 1 MGKQPVRMKAVVYALSPFQQKIMSGLWNDLSGKIHHKISENWISAALLITPVVGSYTYVQ 60
Query: 61 NYQEKEKLAHRY 72
Y+EKEKL+HRY
Sbjct: 61 QYKEKEKLSHRY 72
>gi|356553198|ref|XP_003544945.1| PREDICTED: cytochrome b-c1 complex subunit 8-like [Glycine max]
Length = 72
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/72 (84%), Positives = 65/72 (90%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGKQ V +K+V+YALSPFQQKIMPGLWKDL KIHHKVS+NWIS LLLGPLVGTYAYVQ
Sbjct: 1 MGKQVVPVKSVIYALSPFQQKIMPGLWKDLPTKIHHKVSENWISATLLLGPLVGTYAYVQ 60
Query: 61 NYQEKEKLAHRY 72
NY EKEKLAHRY
Sbjct: 61 NYLEKEKLAHRY 72
>gi|356500960|ref|XP_003519298.1| PREDICTED: cytochrome b-c1 complex subunit 8 [Glycine max]
Length = 72
Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/72 (81%), Positives = 64/72 (88%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGKQ V +K+V+YALSPFQQKIMPGLWKDL KIHHKVS+NWIS LLLGPLVGTY YVQ
Sbjct: 1 MGKQIVPVKSVIYALSPFQQKIMPGLWKDLPTKIHHKVSENWISATLLLGPLVGTYTYVQ 60
Query: 61 NYQEKEKLAHRY 72
NY EKEKL+HRY
Sbjct: 61 NYLEKEKLSHRY 72
>gi|115466706|ref|NP_001056952.1| Os06g0175900 [Oryza sativa Japonica Group]
gi|8096318|dbj|BAA95821.1| putative ubiquinol-cytochrome C reductase complex
ubiquinone-binding protein [Oryza sativa Japonica
Group]
gi|8096328|dbj|BAA95831.1| putative ubiquinol-cytochrome C reductase complex
ubiquinone-binding protein [Oryza sativa Japonica
Group]
gi|113594992|dbj|BAF18866.1| Os06g0175900 [Oryza sativa Japonica Group]
gi|218197694|gb|EEC80121.1| hypothetical protein OsI_21881 [Oryza sativa Indica Group]
gi|222635066|gb|EEE65198.1| hypothetical protein OsJ_20319 [Oryza sativa Japonica Group]
Length = 72
Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 63/72 (87%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGK PVRMKAVVYALSPFQQK+MPGLWKD+T KIHHKVS+NWIS LLL P+VGTY Y
Sbjct: 1 MGKTPVRMKAVVYALSPFQQKVMPGLWKDITTKIHHKVSENWISATLLLAPIVGTYEYAM 60
Query: 61 NYQEKEKLAHRY 72
Y+E+EKL+HRY
Sbjct: 61 YYKEQEKLSHRY 72
>gi|15239099|ref|NP_196156.1| Cytochrome b-c1 complex, subunit 8 protein [Arabidopsis thaliana]
gi|297810649|ref|XP_002873208.1| hypothetical protein ARALYDRAFT_487332 [Arabidopsis lyrata subsp.
lyrata]
gi|10176749|dbj|BAB09980.1| ubiquinol-cytochrome C reductase complex ubiquinone-binding
protein [Arabidopsis thaliana]
gi|34365575|gb|AAQ65099.1| At5g05370 [Arabidopsis thaliana]
gi|297319045|gb|EFH49467.1| hypothetical protein ARALYDRAFT_487332 [Arabidopsis lyrata subsp.
lyrata]
gi|332003483|gb|AED90866.1| Cytochrome b-c1 complex, subunit 8 protein [Arabidopsis thaliana]
Length = 72
Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 65/72 (90%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGKQPV++KAVVYALSPFQQKIM GLWKDL KIHHKVS+NWISTILL+ P+VGTY+Y Q
Sbjct: 1 MGKQPVKLKAVVYALSPFQQKIMTGLWKDLPEKIHHKVSENWISTILLVAPVVGTYSYAQ 60
Query: 61 NYQEKEKLAHRY 72
++E+EKL HR+
Sbjct: 61 YFKEQEKLEHRF 72
>gi|357125090|ref|XP_003564228.1| PREDICTED: cytochrome b-c1 complex subunit 8-like [Brachypodium
distachyon]
Length = 72
Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 63/72 (87%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGK PVRMKAVVYALSPFQQ++MPGLWKD+T KIHHKVS+NWIS LLL P+VGTY Y
Sbjct: 1 MGKMPVRMKAVVYALSPFQQQVMPGLWKDITTKIHHKVSENWISATLLLTPVVGTYQYAM 60
Query: 61 NYQEKEKLAHRY 72
Y+E+EKL+HRY
Sbjct: 61 YYKEQEKLSHRY 72
>gi|194693088|gb|ACF80628.1| unknown [Zea mays]
gi|195604176|gb|ACG23918.1| ubiquinol-cytochrome c reductase complex ubiquinone-binding
protein QP-C [Zea mays]
gi|195607900|gb|ACG25780.1| ubiquinol-cytochrome c reductase complex ubiquinone-binding
protein QP-C [Zea mays]
gi|195611162|gb|ACG27411.1| ubiquinol-cytochrome c reductase complex ubiquinone-binding
protein QP-C [Zea mays]
gi|195617026|gb|ACG30343.1| ubiquinol-cytochrome c reductase complex ubiquinone-binding
protein QP-C [Zea mays]
gi|195618116|gb|ACG30888.1| ubiquinol-cytochrome c reductase complex ubiquinone-binding
protein QP-C [Zea mays]
gi|195621702|gb|ACG32681.1| ubiquinol-cytochrome c reductase complex ubiquinone-binding
protein QP-C [Zea mays]
gi|413944472|gb|AFW77121.1| Ubiquinol-cytochrome c reductase complex ubiquinone-binding
protein QP-C [Zea mays]
gi|413952958|gb|AFW85607.1| Ubiquinol-cytochrome c reductase complex ubiquinone-binding
protein QP-C [Zea mays]
Length = 72
Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 63/72 (87%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGK PVRMKAVVYALSPFQQK+MPGLWKD+T KIHHKV++NWIS LLL P+VGTY Y
Sbjct: 1 MGKTPVRMKAVVYALSPFQQKVMPGLWKDITTKIHHKVTENWISATLLLTPVVGTYQYAM 60
Query: 61 NYQEKEKLAHRY 72
Y+E+EKL+HRY
Sbjct: 61 WYKEQEKLSHRY 72
>gi|242092186|ref|XP_002436583.1| hypothetical protein SORBIDRAFT_10g005110 [Sorghum bicolor]
gi|241914806|gb|EER87950.1| hypothetical protein SORBIDRAFT_10g005110 [Sorghum bicolor]
Length = 72
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/72 (75%), Positives = 63/72 (87%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGK PVRMKAVVYALSPFQQK+MPGLWKD+T KIHHKV++NWIS LL+ P+VGTY Y
Sbjct: 1 MGKMPVRMKAVVYALSPFQQKVMPGLWKDITTKIHHKVTENWISATLLVTPVVGTYQYAM 60
Query: 61 NYQEKEKLAHRY 72
Y+E+EKL+HRY
Sbjct: 61 WYKEQEKLSHRY 72
>gi|242038173|ref|XP_002466481.1| hypothetical protein SORBIDRAFT_01g008560 [Sorghum bicolor]
gi|241920335|gb|EER93479.1| hypothetical protein SORBIDRAFT_01g008560 [Sorghum bicolor]
Length = 72
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/72 (75%), Positives = 63/72 (87%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGK PVRMKAVVYALSPFQQK+MPGLWKD+T KIHHKV++NWIS LL+ P+VGTY Y
Sbjct: 1 MGKVPVRMKAVVYALSPFQQKVMPGLWKDITTKIHHKVTENWISATLLVTPVVGTYQYAM 60
Query: 61 NYQEKEKLAHRY 72
Y+E+EKL+HRY
Sbjct: 61 WYKEQEKLSHRY 72
>gi|15228390|ref|NP_187697.1| Cytochrome b-c1 complex, subunit 8 protein [Arabidopsis thaliana]
gi|6630544|gb|AAF19563.1|AC011708_6 putative ubiquinol-cytochrome C reductase complex
ubiquinone-binding protein (QP-C) [Arabidopsis
thaliana]
gi|21592487|gb|AAM64437.1| putative ubiquinol-cytochrome C reductase complex
ubiquinone-binding protein (QP-C) [Arabidopsis
thaliana]
gi|23306448|gb|AAN17451.1| putative ubiquinol-cytochrome C reductase complex
ubiquinone-binding protein (QP-C) [Arabidopsis
thaliana]
gi|30102794|gb|AAP21315.1| At3g10860 [Arabidopsis thaliana]
gi|332641443|gb|AEE74964.1| Cytochrome b-c1 complex, subunit 8 protein [Arabidopsis thaliana]
Length = 72
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/72 (73%), Positives = 62/72 (86%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGKQPV++KAVVYALSPFQQKIM GLWKDL KIHHKVS+NWIS LL+ P+VGTY Y Q
Sbjct: 1 MGKQPVKLKAVVYALSPFQQKIMTGLWKDLPEKIHHKVSENWISATLLVTPVVGTYWYAQ 60
Query: 61 NYQEKEKLAHRY 72
++E+EKL HR+
Sbjct: 61 YFKEQEKLEHRF 72
>gi|297829638|ref|XP_002882701.1| hypothetical protein ARALYDRAFT_897280 [Arabidopsis lyrata subsp.
lyrata]
gi|297328541|gb|EFH58960.1| hypothetical protein ARALYDRAFT_897280 [Arabidopsis lyrata subsp.
lyrata]
Length = 72
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 61/72 (84%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGKQPV++KAVVYALSPFQQKIM GLWKDL KIHHKVS+NWIS LL+ P+V TY Y Q
Sbjct: 1 MGKQPVKLKAVVYALSPFQQKIMTGLWKDLPEKIHHKVSENWISATLLVTPVVATYWYAQ 60
Query: 61 NYQEKEKLAHRY 72
++E+EKL HR+
Sbjct: 61 YFKEQEKLEHRF 72
>gi|255585284|ref|XP_002533341.1| Ubiquinol-cytochrome c reductase complex ubiquinone-binding
protein QP-C, putative [Ricinus communis]
gi|223526821|gb|EEF29040.1| Ubiquinol-cytochrome c reductase complex ubiquinone-binding
protein QP-C, putative [Ricinus communis]
Length = 92
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/64 (79%), Positives = 56/64 (87%)
Query: 8 MKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQNYQEKEK 67
MKAV+Y+LSPFQQK+M GLWKDL KIHHKVS+NWIS LLL PLVG Y+YVQNYQEKEK
Sbjct: 1 MKAVIYSLSPFQQKVMTGLWKDLPDKIHHKVSENWISATLLLAPLVGVYSYVQNYQEKEK 60
Query: 68 LAHR 71
L HR
Sbjct: 61 LEHR 64
>gi|147789397|emb|CAN75550.1| hypothetical protein VITISV_043543 [Vitis vinifera]
Length = 418
Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 48/59 (81%), Positives = 53/59 (89%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYV 59
MGK PVRMKAVVY+LSPFQQ+IMPGLWKDLT KIHHKV+DNWIS LLL PLVGTY ++
Sbjct: 1 MGKTPVRMKAVVYSLSPFQQQIMPGLWKDLTTKIHHKVTDNWISATLLLAPLVGTYTWL 59
>gi|388517055|gb|AFK46589.1| unknown [Medicago truncatula]
Length = 72
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/72 (70%), Positives = 61/72 (84%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGK V +K+VVYALSPFQQKIMPGLWKDL KIHHKVS+NWIS +LL+ P+VGTY+Y
Sbjct: 1 MGKNIVPVKSVVYALSPFQQKIMPGLWKDLPTKIHHKVSENWISALLLVVPVVGTYSYAM 60
Query: 61 NYQEKEKLAHRY 72
++ E+EKL HRY
Sbjct: 61 HFVEQEKLHHRY 72
>gi|388491770|gb|AFK33951.1| unknown [Medicago truncatula]
Length = 88
Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 60/71 (84%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGK V +K+VVYALSPFQQKIMPGLWKDL KIHHKVS+NWIS +LL+ P+VGTY+Y
Sbjct: 1 MGKNIVPVKSVVYALSPFQQKIMPGLWKDLPTKIHHKVSENWISALLLVVPVVGTYSYAM 60
Query: 61 NYQEKEKLAHR 71
++ E+EKL HR
Sbjct: 61 HFVEQEKLHHR 71
>gi|388512771|gb|AFK44447.1| unknown [Medicago truncatula]
Length = 72
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 60/72 (83%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGK V +K+VVYALSPFQQKIMPGLWKDL KIHHKVS+NWI +LL+ P+VGTY+Y
Sbjct: 1 MGKTIVPVKSVVYALSPFQQKIMPGLWKDLPTKIHHKVSENWIGALLLVVPVVGTYSYAM 60
Query: 61 NYQEKEKLAHRY 72
++ E+EKL HRY
Sbjct: 61 HFVEQEKLHHRY 72
>gi|357491545|ref|XP_003616060.1| Cytochrome b-c1 complex subunit [Medicago truncatula]
gi|355517395|gb|AES99018.1| Cytochrome b-c1 complex subunit [Medicago truncatula]
Length = 173
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 59/70 (84%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGK V +K+VVYALSPFQQKIMPGLWKDL KIHHKVS+NWIS +LL+ P+VGTY+Y
Sbjct: 1 MGKNIVPVKSVVYALSPFQQKIMPGLWKDLPTKIHHKVSENWISALLLVVPVVGTYSYAM 60
Query: 61 NYQEKEKLAH 70
++ E+EKL H
Sbjct: 61 HFVEQEKLHH 70
>gi|297724533|ref|NP_001174630.1| Os06g0177000 [Oryza sativa Japonica Group]
gi|255676771|dbj|BAH93358.1| Os06g0177000 [Oryza sativa Japonica Group]
Length = 118
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/56 (83%), Positives = 51/56 (91%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTY 56
MGK PVRMKAVVYALSPFQQK+MPGLWKD+T KIHHKVS+NWIS LLL P+VGTY
Sbjct: 1 MGKTPVRMKAVVYALSPFQQKVMPGLWKDITTKIHHKVSENWISATLLLAPIVGTY 56
>gi|118482303|gb|ABK93078.1| unknown [Populus trichocarpa]
Length = 63
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/57 (82%), Positives = 51/57 (89%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYA 57
MGKQPV++KAVVYALSPFQQK+MPGLWKDL GKIHHKVS+NWIS LLL PLVG Y
Sbjct: 1 MGKQPVKLKAVVYALSPFQQKVMPGLWKDLPGKIHHKVSENWISATLLLAPLVGVYT 57
>gi|148905821|gb|ABR16073.1| unknown [Picea sitchensis]
Length = 73
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 57/68 (83%)
Query: 5 PVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQNYQE 64
P+ +KAV+Y+LSPF+QKIM GLWKDL K+ K+SDNW++ + L PL+GTY+Y +N++E
Sbjct: 6 PIPLKAVIYSLSPFEQKIMSGLWKDLPHKVEKKISDNWLNAVFFLTPLIGTYSYARNFKE 65
Query: 65 KEKLAHRY 72
+EKL+HRY
Sbjct: 66 EEKLSHRY 73
>gi|116781835|gb|ABK22260.1| unknown [Picea sitchensis]
gi|148909112|gb|ABR17657.1| unknown [Picea sitchensis]
Length = 73
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 55/68 (80%)
Query: 5 PVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQNYQE 64
P+R KAV+Y+LSPF+QKIM GLWKDL K+ K++DNW++ + L PL+GT Y +NY+E
Sbjct: 6 PIRFKAVIYSLSPFEQKIMSGLWKDLPHKVEKKITDNWLNAVFFLTPLIGTTMYAKNYKE 65
Query: 65 KEKLAHRY 72
+EKL+HRY
Sbjct: 66 QEKLSHRY 73
>gi|106879619|emb|CAJ38393.1| ubiquinol-cytochrome c reductase [Plantago major]
Length = 72
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 53/71 (74%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGKQ + +KAV YALSP+ QK+MPGLWKDL GKI HK SD+W+ + + GP+ GT + +
Sbjct: 1 MGKQHIPLKAVTYALSPYNQKVMPGLWKDLPGKIAHKFSDHWLGAVCIFGPVFGTMQFAE 60
Query: 61 NYQEKEKLAHR 71
Y E+EK+ HR
Sbjct: 61 WYTEREKMHHR 71
>gi|168014547|ref|XP_001759813.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688943|gb|EDQ75317.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 72
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGK PVR+K V Y +SP+ Q +M GLWKD+ K+ K +NW+S L+ P+VGTY Y +
Sbjct: 1 MGKVPVRLKEVAYTISPYHQHVMTGLWKDIPYKLSKKFHENWVSAFTLVVPIVGTYMYAE 60
Query: 61 NYQEKEKLAHRY 72
NY+EKEKL HRY
Sbjct: 61 NYREKEKLHHRY 72
>gi|167998454|ref|XP_001751933.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697031|gb|EDQ83368.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 72
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGK PVR+K V Y +SP+ Q +M GLWKD+ K+ K +NW+S L+ P+VGTY Y +
Sbjct: 1 MGKVPVRLKEVAYTISPYHQHVMTGLWKDIPYKLSKKFHENWVSAFTLVVPIVGTYMYAE 60
Query: 61 NYQEKEKLAHRY 72
NY+E+EKL HRY
Sbjct: 61 NYREQEKLHHRY 72
>gi|168047246|ref|XP_001776082.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672592|gb|EDQ59127.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 72
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGK PVR+K V Y +SP+ Q +M GLWKD+ K+ K +NW+S L+ P+VGTY Y +
Sbjct: 1 MGKVPVRLKEVAYTISPYHQHVMTGLWKDIPYKLSKKFHENWVSAFTLVVPIVGTYMYAE 60
Query: 61 NYQEKEKLAHRY 72
NY+E EKL HRY
Sbjct: 61 NYRENEKLHHRY 72
>gi|195654377|gb|ACG46656.1| hypothetical protein [Zea mays]
Length = 56
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 46/53 (86%), Gaps = 3/53 (5%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWIST---ILLLG 50
MGK PVRMKAVVYALSPFQQK+MPGLWKD+T KIHHKV++NWIS + LLG
Sbjct: 1 MGKTPVRMKAVVYALSPFQQKVMPGLWKDITTKIHHKVTENWISATPVVFLLG 53
>gi|307106527|gb|EFN54772.1| hypothetical protein CHLNCDRAFT_134704 [Chlorella variabilis]
Length = 421
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 49/72 (68%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGK P+R++ VVYALSP+QQ +M GLWKDL K H ++ + I + P+VG Y
Sbjct: 350 MGKVPIRLREVVYALSPYQQSVMTGLWKDLPHKAAHHAANLRDAVIFCVAPIVGIAYYCA 409
Query: 61 NYQEKEKLAHRY 72
+Y+EKEKL HR+
Sbjct: 410 DYKEKEKLHHRF 421
>gi|224059210|ref|XP_002299769.1| predicted protein [Populus trichocarpa]
gi|222847027|gb|EEE84574.1| predicted protein [Populus trichocarpa]
Length = 53
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 43/53 (81%)
Query: 7 RMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYV 59
R +A+VY L FQQK+M G+WKDL GKIHHK S+NW+S L+LGPLVG YAYV
Sbjct: 1 RTQALVYVLLSFQQKVMSGVWKDLPGKIHHKFSENWVSATLILGPLVGVYAYV 53
>gi|168018978|ref|XP_001762022.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686739|gb|EDQ73126.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 72
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 49/72 (68%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQ 60
MGK PVR+K V Y+LSP Q I GL D+ K + +DNW+S + LL P++G+Y Y +
Sbjct: 1 MGKVPVRLKEVTYSLSPCHQHIWRGLLHDVRYKTMKRFNDNWVSALFLLVPVLGSYGYAE 60
Query: 61 NYQEKEKLAHRY 72
Y+E+EKL HR+
Sbjct: 61 AYREREKLHHRH 72
>gi|384249706|gb|EIE23187.1| hypothetical protein COCSUDRAFT_63545 [Coccomyxa subellipsoidea
C-169]
Length = 73
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLG-PLVGTYAYV 59
MGK PVR+K V Y +SPF+ ++ GL+KDL KIHHK +W+ L P T+ Y
Sbjct: 1 MGKLPVRLKEVTYTISPFEVSVLSGLFKDLPSKIHHKFQQHWVDVGLFFALPTYATFWYA 60
Query: 60 QNYQEKEKLAHRY 72
Y+EKEK HRY
Sbjct: 61 NQYKEKEKHEHRY 73
>gi|145352574|ref|XP_001420616.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580851|gb|ABO98909.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 73
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLG-PLVGTYAYV 59
M K P R+++V Y+LSP + +M GL+KD + +V +N + + PL T Y
Sbjct: 1 MAKVPARLRSVTYSLSPMRTGVMHGLFKDWASGMATRVKENAVDAGVFCALPLGATVWYA 60
Query: 60 QNYQEKEKLAHRY 72
NY+E EKL HRY
Sbjct: 61 LNYKENEKLEHRY 73
>gi|302772176|ref|XP_002969506.1| hypothetical protein SELMODRAFT_270776 [Selaginella
moellendorffii]
gi|300162982|gb|EFJ29594.1| hypothetical protein SELMODRAFT_270776 [Selaginella
moellendorffii]
Length = 82
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 6 VRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQNYQEK 65
VR++ VVY LSP KIMPGLWKDL KI HK+ +NW +L+ G + ++ +
Sbjct: 17 VRLREVVYTLSPNHLKIMPGLWKDLPEKIKHKL-ENWHYGVLVAVGFYGPVWFCKHSVHQ 75
Query: 66 EKLAHR 71
+L+HR
Sbjct: 76 RELSHR 81
>gi|302810179|ref|XP_002986781.1| hypothetical protein SELMODRAFT_229220 [Selaginella
moellendorffii]
gi|300145435|gb|EFJ12111.1| hypothetical protein SELMODRAFT_229220 [Selaginella
moellendorffii]
Length = 82
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 2 GKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILLLGPLVGTYAYVQN 61
G VR++ VVY LSP KIMPGLWKDL KI HK+ +NW +L+ G + ++
Sbjct: 13 GVVAVRLREVVYTLSPNHLKIMPGLWKDLPEKIKHKL-ENWHYGVLVAVGFYGPVWFCKH 71
Query: 62 YQEKEKLAHR 71
+ +L+HR
Sbjct: 72 SVHQRELSHR 81
>gi|255080836|ref|XP_002503991.1| predicted protein [Micromonas sp. RCC299]
gi|226519258|gb|ACO65249.1| predicted protein [Micromonas sp. RCC299]
Length = 72
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWISTILL-LGPLVGTYAYV 59
MG+ VR+ VVY +SP + ++ GL+KD K+ K W + P VG Y Y
Sbjct: 1 MGRSAVRLSEVVYTVSPMKTGVLGGLFKDWP-KVMAKKIGGWGDAFFFGVIPTVGVYQYA 59
Query: 60 QNYQEKEKLAHRY 72
NY+E EK +HRY
Sbjct: 60 VNYKENEKQSHRY 72
>gi|424513389|emb|CCO66011.1| predicted protein [Bathycoccus prasinos]
Length = 58
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 1 MGKQPVRMKAVVYALSPFQQKIMPGLWKDLTGKIHHKVSDNWIS-TILLLGPLVGT 55
MG+ PV++K V+Y +S + +IM L +D I K+ W T+ + P VGT
Sbjct: 1 MGRTPVKLKEVIYGISSNKVEIMGSLGRDALSAISKKIGGGWFDVTVFGIAPTVGT 56
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,187,249,715
Number of Sequences: 23463169
Number of extensions: 39314626
Number of successful extensions: 87831
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 87788
Number of HSP's gapped (non-prelim): 41
length of query: 72
length of database: 8,064,228,071
effective HSP length: 44
effective length of query: 28
effective length of database: 7,031,848,635
effective search space: 196891761780
effective search space used: 196891761780
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)