BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046372
(266 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LL11|WUS_PETHY Protein WUSCHEL OS=Petunia hybrida GN=WUS PE=2 SV=1
Length = 307
Score = 217 bits (552), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 130/270 (48%), Positives = 172/270 (63%), Gaps = 20/270 (7%)
Query: 11 QGNGACGSSGKGN--NCHCRPTCPRWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARL 68
QG S K N N CR RWTPTTDQIRILK+LYYNNGVRSPTAEQIQ+ISA+L
Sbjct: 23 QGTNIEDGSNKNNSSNFMCRQNSTRWTPTTDQIRILKDLYYNNGVRSPTAEQIQRISAKL 82
Query: 69 RQYGKIEGKNVFYWFQNYKARERLKKKIEGSSTSAADNLPMHQRPAAATNWKPEDFANKS 128
RQYGKIEGKNVFYWFQN+KARER KK++ ++T+ NLPM + W+ A+
Sbjct: 83 RQYGKIEGKNVFYWFQNHKARERQKKRLIAAATTDNTNLPMQMQFQRGV-WRSS--ADDP 139
Query: 129 RSQSITSAGVSA-TLPSYSVYTGGQMGDHGYGPVTMEKNFRDCSISSTGSSVVGGSRSQN 187
T+ GV + S+ V GQ G+HGYG + MEK+FRDCSIS GSS + QN
Sbjct: 140 IHHKYTNPGVHCPSASSHGVLAVGQNGNHGYGALAMEKSFRDCSISP-GSS-MSHHHHQN 197
Query: 188 YGWVGIDPHTSSYIF-FGQKNSADGNQGNDKEDEEEE--------ENGHPGIETLPLFPM 238
+ W G+DP++S+ + F +K N+ + ++E++E + IETLPLFPM
Sbjct: 198 FAWAGVDPYSSTTTYPFLEKTKHFENETLEADEEQQEEDQENYYYQRTTSAIETLPLFPM 257
Query: 239 HGEDSINNYCNSKPNSSS--YYSGWYGSND 266
H E++I+++CN K SS +Y+ WY ++D
Sbjct: 258 H-EENISSFCNLKHQESSGGFYTEWYRADD 286
>sp|Q84VT7|WUS_SOLLC Protein WUSCHEL OS=Solanum lycopersicum GN=WUS PE=2 SV=1
Length = 272
Score = 207 bits (526), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 124/267 (46%), Positives = 167/267 (62%), Gaps = 19/267 (7%)
Query: 9 QHQGNGACGSSGKGNNCHCRPTCPRWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARL 68
+HQ N G N+ CR + RWTPT+DQIRILK+LYYNNGVRSPTAEQIQ+ISA+L
Sbjct: 2 EHQHNIEDGGKNSNNSFLCRQSSSRWTPTSDQIRILKDLYYNNGVRSPTAEQIQRISAKL 61
Query: 69 RQYGKIEGKNVFYWFQNYKARERLKKKIEGSSTSAADNLPMHQRPAAATNWKPEDFANKS 128
RQYGKIEGKNVFYWFQN+KARER KK++ ++ SA DN + W+ D +K
Sbjct: 62 RQYGKIEGKNVFYWFQNHKARERQKKRLIAAA-SATDNNNISSMQMIPHLWRSPDDHHKY 120
Query: 129 RSQSITSAGVSATLP-SYSVYTGGQMGDHGYGPVTMEKNFRDCSISSTGSSVVGGSRSQN 187
+ + T+ GV P S+ V Q G++GYG + MEK+FR+CSIS GGS QN
Sbjct: 121 NT-ATTNPGVQCPSPSSHGVLPVVQTGNYGYGTLAMEKSFRECSISPP-----GGSYHQN 174
Query: 188 YGWVGIDPHT-------SSYIFFGQKNSAD-GNQGNDKEDEEEEENGHPGIETLPLFPMH 239
WVG+DP+ ++Y F + N+ +++++EE + G+ +ETL LFPMH
Sbjct: 175 LTWVGVDPYNNMSTTSPATYPFLEKSNNKHYEETLDEEQEEENYQRGNSALETLSLFPMH 234
Query: 240 GEDSINNYCNSKPNSSSYYSGWYGSND 266
E+ I+N+C SS GWY S++
Sbjct: 235 EENIISNFCIKHHESS---GGWYHSDN 258
>sp|Q6YBV1|WUS_ANTMA Protein WUSCHEL OS=Antirrhinum majus GN=WUS PE=2 SV=1
Length = 281
Score = 202 bits (514), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 147/233 (63%), Gaps = 7/233 (3%)
Query: 11 QGNGACGSSGKGNNCHCRPTCPRWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQ 70
QG G + G++ CR + RWTPTTDQIRILK+LYYNNGVRSPTAEQIQ+ISA+LRQ
Sbjct: 18 QGIGKINNGSGGSSFLCRQSSTRWTPTTDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQ 77
Query: 71 YGKIEGKNVFYWFQNYKARERLKKKIEGSSTSAADNLPMHQRPAAATNWKPEDFANK-SR 129
YGKIEGKNVFYWFQN+KARER KK+ + +H ++KP NK S
Sbjct: 78 YGKIEGKNVFYWFQNHKARERQKKRFTADHHHHMNVPTIHNH-----HYKPPPVYNKFSN 132
Query: 130 SQSITSAGVSATLPSYSVYTGGQMGDHGYGPVTMEKNFRDCSISSTGSSVVGGSRSQNYG 189
S + S P + G +G++GYG V MEK+FR+C+ISST + VGGS SQN
Sbjct: 133 MNSGSFPSSSNGSPGFLTTPGSHVGNYGYGSVAMEKSFRECTISSTTDANVGGSMSQNIA 192
Query: 190 WVGI-DPHTSSYIFFGQKNSADGNQGNDKEDEEEEENGHPGIETLPLFPMHGE 241
W+GI + + + Y F + +G + +EE EEN IETLPLFPMH +
Sbjct: 193 WIGINNEYHNPYTFIDTRKYMNGYDQTLEIEEEAEENYTAEIETLPLFPMHAD 245
>sp|Q9SB92|WUS_ARATH Protein WUSCHEL OS=Arabidopsis thaliana GN=WUS PE=1 SV=2
Length = 292
Score = 164 bits (416), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/261 (44%), Positives = 143/261 (54%), Gaps = 67/261 (25%)
Query: 27 CRPTCPRWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNY 86
CR T RWTPTT+QI+ILKELYYNN +RSPTA+QIQKI+ARLRQ+GKIEGKNVFYWFQN+
Sbjct: 32 CRQTSTRWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLRQFGKIEGKNVFYWFQNH 91
Query: 87 KARERLKKKIEGSSTS-----------AADN-----------LPMHQRPAAATNWKPE-- 122
KARER KK+ G++ + AA++ +PM QRPA + N K
Sbjct: 92 KARERQKKRFNGTNMTTPSSSPNSVMMAANDHYHPLLHHHHGVPM-QRPANSVNVKLNQD 150
Query: 123 -------------DFANKSRSQSITSAGVSATLPSYSVYTGGQMGDHGYGPVTMEKNFRD 169
+ N + + S T GV + G M H YG +ME+ D
Sbjct: 151 HHLYHHNKPYPSFNNGNLNHASSGTECGVVNA-------SNGYMSSHVYG--SMEQ---D 198
Query: 170 CSISSTGSSVVGGSRSQNYGWVGIDPHTSS--YIFFGQKNSADGNQGNDKEDEEEEENGH 227
CS++ VGG GW +D H SS Y FF + G +G+ EEEE G
Sbjct: 199 CSMNYNN---VGG------GWANMDHHYSSAPYNFFDRAKPLFGLEGH---QEEEECGGD 246
Query: 228 PGIE---TLPLFPMHGEDSIN 245
+E TLPLFPMHGED IN
Sbjct: 247 AYLEHRRTLPLFPMHGEDHIN 267
>sp|Q7XM13|WOX1A_ORYSJ WUSCHEL-related homeobox 1A OS=Oryza sativa subsp. japonica
GN=WOX1A PE=2 SV=2
Length = 289
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 51/69 (73%), Positives = 63/69 (91%)
Query: 27 CRPTCPRWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNY 86
CRP+ RWTPTT+QI+IL+ELYY+ G+RSP +EQIQ+I+A LRQYG+IEGKNVFYWFQN+
Sbjct: 29 CRPSGTRWTPTTEQIKILRELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNH 88
Query: 87 KARERLKKK 95
KARER KK+
Sbjct: 89 KARERQKKR 97
>sp|Q33DK0|WOX1B_ORYSJ WUSCHEL-related homeobox 1B OS=Oryza sativa subsp. japonica
GN=WOX1B PE=1 SV=2
Length = 289
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 51/69 (73%), Positives = 63/69 (91%)
Query: 27 CRPTCPRWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNY 86
CRP+ RWTPTT+QI+IL+ELYY+ G+RSP +EQIQ+I+A LRQYG+IEGKNVFYWFQN+
Sbjct: 29 CRPSGTRWTPTTEQIKILRELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNH 88
Query: 87 KARERLKKK 95
KARER KK+
Sbjct: 89 KARERQKKR 97
>sp|Q6X7K0|WOX1_ARATH WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana GN=WOX1 PE=2
SV=2
Length = 350
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 55/63 (87%), Gaps = 1/63 (1%)
Query: 33 RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARERL 92
RW PT DQ+R+L+ELY G R+P+A+ IQ+I+A+LR+YGKIEGKNVFYWFQN+KARER
Sbjct: 76 RWNPTPDQLRVLEELY-RQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQ 134
Query: 93 KKK 95
K++
Sbjct: 135 KRR 137
>sp|Q6X7K1|WOX2_ARATH WUSCHEL-related homeobox 2 OS=Arabidopsis thaliana GN=WOX2 PE=2
SV=1
Length = 260
Score = 94.4 bits (233), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Query: 33 RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARERL 92
RW PT DQI +L+ LY G+R+P+A+QIQ+I+ RLR YG IEGKNVFYWFQN+KAR+R
Sbjct: 14 RWNPTKDQITLLENLY-KEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQ 72
Query: 93 KKKIE 97
K+K E
Sbjct: 73 KQKQE 77
>sp|Q8H1D2|WOX5_ARATH WUSCHEL-related homeobox 5 OS=Arabidopsis thaliana GN=WOX5 PE=2
SV=1
Length = 182
Score = 91.3 bits (225), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 58/80 (72%), Gaps = 2/80 (2%)
Query: 17 GSSGKGNNCHCRPT-CPRWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIE 75
G S +GNN T C RW PT +Q++IL +L+ G+R+PT +QIQKIS L YGKIE
Sbjct: 7 GRSLRGNNNGGTGTKCGRWNPTVEQLKILTDLF-RAGLRTPTTDQIQKISTELSFYGKIE 65
Query: 76 GKNVFYWFQNYKARERLKKK 95
KNVFYWFQN+KARER K++
Sbjct: 66 SKNVFYWFQNHKARERQKRR 85
>sp|Q8LR86|WOX5_ORYSJ WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica
GN=WOX5 PE=2 SV=1
Length = 313
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 49/56 (87%), Gaps = 1/56 (1%)
Query: 33 RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKA 88
RWTPT +QI +L+ LY G+R+PTAEQIQ+I+ARLR++G IEGKNVFYWFQN+KA
Sbjct: 44 RWTPTKEQIAVLEGLY-RQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKA 98
>sp|A2WWU7|WOX5_ORYSI WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica GN=WOX5
PE=3 SV=1
Length = 313
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 49/56 (87%), Gaps = 1/56 (1%)
Query: 33 RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKA 88
RWTPT +QI +L+ LY G+R+PTAEQIQ+I+ARLR++G IEGKNVFYWFQN+KA
Sbjct: 44 RWTPTKEQIAVLEGLY-RQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKA 98
>sp|Q9FFK0|WOX7_ARATH WUSCHEL-related homeobox 7 OS=Arabidopsis thaliana GN=WOX7 PE=2
SV=1
Length = 122
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 60/95 (63%), Gaps = 12/95 (12%)
Query: 31 CPRWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARE 90
C RW PT +Q+++L +L+ G+R+P+ +QIQKIS L YGKIE KNVFYWFQN+KARE
Sbjct: 27 CGRWNPTVEQVKLLTDLF-KAGLRTPSTDQIQKISMELSFYGKIESKNVFYWFQNHKARE 85
Query: 91 RLK-KKIEGS----------STSAADNLPMHQRPA 114
R K +KI S DN+ HQ PA
Sbjct: 86 RQKCRKISTVKFDHRQDTDLSKPRRDNVRRHQLPA 120
>sp|Q9SIB4|WOX3_ARATH WUSCHEL-related homeobox 3 OS=Arabidopsis thaliana GN=WOX3 PE=2
SV=1
Length = 244
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 54/66 (81%), Gaps = 3/66 (4%)
Query: 33 RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARER- 91
RW PT +Q+ IL+E+Y +G+R+P A QIQ+I+A L YG+IEGKNVFYWFQN+KAR+R
Sbjct: 8 RWCPTPEQLMILEEMY-RSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKARDRQ 66
Query: 92 -LKKKI 96
L+KK+
Sbjct: 67 KLRKKL 72
>sp|Q8W0F1|WOX9_ORYSJ WUSCHEL-related homeobox 9 OS=Oryza sativa subsp. japonica GN=WOX9
PE=2 SV=1
Length = 200
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 55/73 (75%), Gaps = 3/73 (4%)
Query: 31 CPRWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARE 90
C RW PT +Q+++L EL+ G+R+P+ EQIQ+IS L +GK+E KNVFYWFQN+KARE
Sbjct: 12 CGRWNPTAEQVKVLTELF-RAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQNHKARE 70
Query: 91 R--LKKKIEGSST 101
R KK+ G+S+
Sbjct: 71 RHHHKKRRRGASS 83
>sp|Q6X7J9|WOX4_ARATH WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana GN=WOX4 PE=2
SV=1
Length = 251
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Query: 33 RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARERL 92
RW PT +QI IL E+ Y G+R+P A+QI+ I+ +L +YGKIEGKNVFYWFQN+KARER
Sbjct: 90 RWNPTQEQIGIL-EMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQ 148
Query: 93 KKK 95
K+K
Sbjct: 149 KQK 151
>sp|Q5W7C3|WOX2_ORYSJ Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp.
japonica GN=WOX2 PE=3 SV=1
Length = 286
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 33 RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARERL 92
RW PT +Q+ +L+E+Y G+R+P A QIQ+I+A L YG+IEGKNVFYWFQN+KAR+R
Sbjct: 27 RWCPTPEQLMMLEEMY-RGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQ 85
Query: 93 KKK 95
K +
Sbjct: 86 KLR 88
>sp|A2XZR3|WOX2_ORYSI Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. indica
GN=WOX2 PE=3 SV=1
Length = 286
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 33 RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARERL 92
RW PT +Q+ +L+E+Y G+R+P A QIQ+I+A L YG+IEGKNVFYWFQN+KAR+R
Sbjct: 27 RWCPTPEQLMMLEEMY-RGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQ 85
Query: 93 KKK 95
K +
Sbjct: 86 KLR 88
>sp|Q9ZVF5|WOX6_ARATH WUSCHEL-related homeobox 6 OS=Arabidopsis thaliana GN=WOX6 PE=2
SV=2
Length = 271
Score = 84.7 bits (208), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 48/56 (85%), Gaps = 1/56 (1%)
Query: 33 RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKA 88
RW PT +QI L+ELY +G R+PT EQIQ+I+++LR+YG+IEGKNVFYWFQN+KA
Sbjct: 61 RWNPTPEQITTLEELY-RSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKA 115
>sp|Q7XTV3|WOX4_ORYSJ WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. japonica GN=WOX4
PE=2 SV=2
Length = 236
Score = 84.3 bits (207), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Query: 33 RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARERL 92
RW P+ +QI++L E+ Y G+R+P + QI++I+ L +YG+IEGKNVFYWFQN+KARER
Sbjct: 92 RWNPSAEQIKVL-EMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQ 150
Query: 93 KKK 95
K+K
Sbjct: 151 KQK 153
>sp|Q25AM2|WOX4_ORYSI WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica GN=WOX4
PE=3 SV=1
Length = 236
Score = 84.3 bits (207), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Query: 33 RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARERL 92
RW P+ +QI++L E+ Y G+R+P + QI++I+ L +YG+IEGKNVFYWFQN+KARER
Sbjct: 92 RWNPSAEQIKVL-EMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQ 150
Query: 93 KKK 95
K+K
Sbjct: 151 KQK 153
>sp|Q6S3I3|WOX3B_MAIZE WUSCHEL-related homeobox 3B OS=Zea mays GN=WOX3B PE=2 SV=1
Length = 265
Score = 81.3 bits (199), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Query: 33 RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYK 87
RW PT +Q+ IL+E+Y +GVR+P A +IQ+I+A L YG+IEGKNVFYWFQN+K
Sbjct: 8 RWCPTPEQLMILEEMY-RSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>sp|Q70UV1|WOX3A_MAIZE WUSCHEL-related homeobox 3A OS=Zea mays GN=WOX3A PE=2 SV=1
Length = 262
Score = 80.9 bits (198), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Query: 33 RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYK 87
RW PT +Q+ IL+E+Y +GVR+P A +IQ+I+A L YG+IEGKNVFYWFQN+K
Sbjct: 8 RWCPTPEQLMILEEMY-RSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>sp|Q33DK1|WOX3_ORYSJ WUSCHEL-related homeobox 3 OS=Oryza sativa subsp. japonica
GN=WOX3 PE=1 SV=1
Length = 203
Score = 78.2 bits (191), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Query: 33 RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYK 87
RW PT +Q+ IL+E+Y +GVR+P A +IQ+I+A L YG+IEGKNVFYWFQN+K
Sbjct: 8 RWCPTPEQLMILEEMY-RSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>sp|A2ZH47|WOX3_ORYSI WUSCHEL-related homeobox 3 OS=Oryza sativa subsp. indica GN=WOX3
PE=3 SV=1
Length = 203
Score = 78.2 bits (191), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Query: 33 RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYK 87
RW PT +Q+ IL+E+Y +GVR+P A +IQ+I+A L YG+IEGKNVFYWFQN+K
Sbjct: 8 RWCPTPEQLMILEEMY-RSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>sp|Q6X7J5|WOX8_ARATH WUSCHEL-related homeobox 8 OS=Arabidopsis thaliana GN=WOX8 PE=2
SV=1
Length = 325
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 32 PRWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARER 91
PRW P +QIRIL+ ++ N+G +P E+IQ+I RL++YG+I NVFYWFQN K+R +
Sbjct: 54 PRWNPKPEQIRILESIF-NSGTINPPREEIQRIRIRLQEYGQIGDANVFYWFQNRKSRAK 112
Query: 92 LKKKIEGSS 100
K ++ S
Sbjct: 113 HKLRVHHKS 121
>sp|Q6X7J4|WOX9_ARATH WUSCHEL-related homeobox 9 OS=Arabidopsis thaliana GN=WOX9 PE=2
SV=1
Length = 378
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 32 PRWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARER 91
PRW P +QIRIL E +N+G+ +P E+I++I A+L++YG++ NVFYWFQN K+R +
Sbjct: 54 PRWNPKPEQIRIL-EAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSK 112
Query: 92 LKKKI 96
K ++
Sbjct: 113 HKLRL 117
>sp|Q0JKK6|WOX7_ORYSJ WUSCHEL-related homeobox 7 OS=Oryza sativa subsp. japonica GN=WOX7
PE=2 SV=2
Length = 533
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 32 PRWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARER 91
PRW P +QIRIL E +N+G+ +P ++I +I +L++YG++ NVFYWFQN K+R +
Sbjct: 68 PRWNPRPEQIRIL-EAIFNSGMVNPPRDEIPRIRMQLQEYGQVGDANVFYWFQNRKSRSK 126
Query: 92 LKKKIEGS 99
K + G+
Sbjct: 127 NKLRSGGT 134
>sp|A3B6V0|WOX12_ORYSJ WUSCHEL-related homeobox 12 OS=Oryza sativa subsp. japonica
GN=WOX12 PE=2 SV=2
Length = 515
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 22/109 (20%)
Query: 4 QQQQNQHQGNG-----------ACGSSGKGNNCHCRPTC----------PRWTPTTDQIR 42
QQQQ GNG ++G G C PRW P +QIR
Sbjct: 22 QQQQPDMNGNGSSSSSFLLSPPTAATTGNGKPSLLSSGCEEGTRNPEPKPRWNPRPEQIR 81
Query: 43 ILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARER 91
IL+ ++ N+G+ +P ++I++I +L++YG++ NVFYWFQN K+R +
Sbjct: 82 ILEGIF-NSGMVNPPRDEIRRIRLQLQEYGQVGDANVFYWFQNRKSRTK 129
>sp|A3BKM2|WOX13_ORYSJ WUSCHEL-related homeobox 13 OS=Oryza sativa subsp. japonica
GN=WOX13 PE=2 SV=1
Length = 306
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 32 PRWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARER 91
PR P +QIRIL E +N+G+ +P ++I +I +L++YG++ NVFYWFQN K+R +
Sbjct: 135 PRRNPRPEQIRIL-EAIFNSGMVNPPRDEIPRIRMQLQEYGQVGDANVFYWFQNRKSRSK 193
Query: 92 LKKKIEGS 99
K + G+
Sbjct: 194 NKLRSGGT 201
>sp|Q9LM84|WOX14_ARATH WUSCHEL-related homeobox 14 OS=Arabidopsis thaliana GN=WOX14 PE=2
SV=1
Length = 211
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 20 GKGNNCHCRPTCPRWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNV 79
G ++ H T RWTPT+ Q++IL+ +Y + G +P +I++I+ L ++G+I NV
Sbjct: 82 GASSSSHRISTRHRWTPTSTQLQILESIY-DEGSGTPNRRRIREIATELSEHGQITETNV 140
Query: 80 FYWFQNYKARERLKKKIEGSSTSAADNLPM 109
+ WFQN +AR + K+ ++ AD++ +
Sbjct: 141 YNWFQNRRARSKRKQPQTTTANGQADDVAV 170
>sp|O81788|WOX13_ARATH WUSCHEL-related homeobox 13 OS=Arabidopsis thaliana GN=WOX13 PE=2
SV=1
Length = 268
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 33 RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARERL 92
RWTPT Q++IL+ ++ + G +P+ ++I+ I+ L Q+G+I +NV+ WFQN +AR +
Sbjct: 99 RWTPTPVQLQILERIF-DQGTGTPSKQKIKDITEELSQHGQIAEQNVYNWFQNRRARSKR 157
Query: 93 KK 94
K+
Sbjct: 158 KQ 159
>sp|Q5QMM3|WOX8_ORYSJ WUSCHEL-related homeobox 8 OS=Oryza sativa subsp. japonica GN=WOX8
PE=2 SV=1
Length = 267
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 33 RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARERL 92
RWTPT Q++IL+ ++ + G +P+ ++I+ I+A L Q+G+I NV+ WFQN +AR +
Sbjct: 92 RWTPTPMQLQILENIF-DQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKR 150
Query: 93 KK 94
K+
Sbjct: 151 KQ 152
>sp|Q6Z3L4|WOX10_ORYSJ WUSCHEL-related homeobox 10 OS=Oryza sativa subsp. japonica
GN=WOX10 PE=2 SV=1
Length = 284
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 4 QQQQNQHQGNGAC-GSSGKGNNCHCRPTCPRWTPTTDQIRILKELYYNNGVRSPTAEQIQ 62
QQQQ Q + G SG G P RW P +QI IL+ ++ N+G+ +P ++
Sbjct: 18 QQQQLMMQAPASHNGGSGGGE-----PARSRWAPKPEQILILESIF-NSGMVNPAKDETA 71
Query: 63 KISARLRQYGKIEGKNVFYWFQN 85
+I L ++G + NVFYWFQN
Sbjct: 72 RIRRLLERFGAVRDANVFYWFQN 94
>sp|A2YST1|WOX10_ORYSI WUSCHEL-related homeobox 10 OS=Oryza sativa subsp. indica
GN=WOX10 PE=2 SV=1
Length = 284
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 4 QQQQNQHQGNGAC-GSSGKGNNCHCRPTCPRWTPTTDQIRILKELYYNNGVRSPTAEQIQ 62
QQQQ Q + G SG G P RW P +QI IL+ ++ N+G+ +P ++
Sbjct: 18 QQQQLMMQAPASHNGGSGGGE-----PARSRWAPKPEQILILESIF-NSGMVNPAKDETA 71
Query: 63 KISARLRQYGKIEGKNVFYWFQN 85
+I L ++G + NVFYWFQN
Sbjct: 72 RIRRLLERFGAVRDANVFYWFQN 94
>sp|Q0D3I7|WOX11_ORYSJ WUSCHEL-related homeobox 11 OS=Oryza sativa subsp. japonica
GN=WOX11 PE=2 SV=1
Length = 262
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 29 PTCPRWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQN 85
P RWTP +QI IL+ ++ N+G+ +P ++ +I L ++G + NVFYWFQN
Sbjct: 18 PVRSRWTPKPEQILILESIF-NSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQN 73
>sp|Q8GY25|WOX12_ARATH WUSCHEL-related homeobox 12 OS=Arabidopsis thaliana GN=WOX12 PE=2
SV=1
Length = 268
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 17 GSSGKGNNCHCRPTCPRWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEG 76
G+S ++ P RW+P +QI IL+ ++ N+G +P ++ +I L ++G +
Sbjct: 5 GASHSPSSTSTEPVRARWSPKPEQILILESIF-NSGTVNPPKDETVRIRKMLEKFGAVGD 63
Query: 77 KNVFYWFQN 85
NVFYWFQN
Sbjct: 64 ANVFYWFQN 72
>sp|Q6X7J3|WOX11_ARATH WUSCHEL-related homeobox 11 OS=Arabidopsis thaliana GN=WOX11 PE=2
SV=2
Length = 268
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 27 CRPTCPRWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQN 85
P RW+P +QI IL+ ++++ G+ +P E+ +I L ++G + NVFYWFQN
Sbjct: 27 AEPVRSRWSPKPEQILILESIFHS-GMVNPPKEETVRIRKMLEKFGAVGDANVFYWFQN 84
>sp|Q10M29|WOX6_ORYSJ WUSCHEL-related homeobox 6 OS=Oryza sativa subsp. japonica
GN=WOX6 PE=2 SV=1
Length = 328
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 29 PTCPRWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQN 85
P RWTP +QI IL+ ++ N+G+ +P ++ +I L ++G + NVFYWFQN
Sbjct: 38 PVRSRWTPKPEQILILESIF-NSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQN 93
>sp|A2XG77|WOX6_ORYSI WUSCHEL-related homeobox 6 OS=Oryza sativa subsp. indica GN=WOX6
PE=2 SV=1
Length = 328
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 29 PTCPRWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQN 85
P RWTP +QI IL+ ++ N+G+ +P ++ +I L ++G + NVFYWFQN
Sbjct: 38 PVRSRWTPKPEQILILESIF-NSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQN 93
>sp|Q9LM83|WOX10_ARATH Putative WUSCHEL-related homeobox 10 OS=Arabidopsis thaliana
GN=WOX10 PE=3 SV=1
Length = 197
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 40 QIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARERLKKKIEGS 99
Q++IL+ +Y G +P +I++I+ L ++G+I KNV++WFQN +AR + K+ +
Sbjct: 86 QLQILENIY-KEGSGTPNPRRIKEITMELSEHGQIMEKNVYHWFQNRRARSKRKQPPTTT 144
Query: 100 STSA-ADN 106
TS+ AD+
Sbjct: 145 ITSSQADD 152
>sp|Q5QMZ9|HOX29_ORYSJ Homeobox-leucine zipper protein HOX29 OS=Oryza sativa subsp.
japonica GN=HOX29 PE=2 SV=2
Length = 868
Score = 36.2 bits (82), Expect = 0.26, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 33 RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARERL 92
R+TP +Q+ L+ LYY P++ + Q++ ++ K + WFQN + RE+
Sbjct: 15 RYTP--EQVEALERLYYE--CPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCREKQ 70
Query: 93 KKK 95
+K+
Sbjct: 71 RKE 73
>sp|O73590|ZFHX4_CHICK Zinc finger homeobox protein 4 OS=Gallus gallus GN=ZFHX4 PE=2 SV=2
Length = 3573
Score = 35.8 bits (81), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 33 RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARER 91
R T T +Q+ IL E Y + +PT + + I+ R+ G ++ + V WFQN +ARER
Sbjct: 2552 RTTITPEQLEILYEKYLLDS--NPTRKMLDHIA---REVG-LKKRVVQVWFQNTRARER 2604
>sp|A2WLR5|HOX29_ORYSI Homeobox-leucine zipper protein HOX29 OS=Oryza sativa subsp.
indica GN=HOX29 PE=2 SV=2
Length = 861
Score = 35.8 bits (81), Expect = 0.32, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 33 RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARERL 92
R+TP +Q+ L+ LYY P++ + Q++ ++ K + WFQN + RE+
Sbjct: 8 RYTP--EQVEALERLYYE--CPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCREKQ 63
Query: 93 KKK 95
+K+
Sbjct: 64 RKE 66
>sp|Q9JJN2|ZFHX4_MOUSE Zinc finger homeobox protein 4 OS=Mus musculus GN=Zfhx4 PE=1 SV=1
Length = 3550
Score = 35.8 bits (81), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 33 RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARER 91
R T T +Q+ IL E Y + +PT + + I+ R+ G ++ + V WFQN +ARER
Sbjct: 2546 RTTITPEQLEILYEKYLLDS--NPTRKMLDHIA---REVG-LKKRVVQVWFQNTRARER 2598
>sp|Q86UP3|ZFHX4_HUMAN Zinc finger homeobox protein 4 OS=Homo sapiens GN=ZFHX4 PE=1 SV=1
Length = 3567
Score = 35.8 bits (81), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 33 RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARER 91
R T T +Q+ IL E Y + +PT + + I+ R+ G ++ + V WFQN +ARER
Sbjct: 2564 RTTITPEQLEILYEKYLLDS--NPTRKMLDHIA---REVG-LKKRVVQVWFQNTRARER 2616
>sp|Q39123|ATHB8_ARATH Homeobox-leucine zipper protein ATHB-8 OS=Arabidopsis thaliana
GN=ATHB-8 PE=1 SV=1
Length = 833
Score = 35.8 bits (81), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 33 RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARERL 92
R+TP +Q+ L+ LY N P++ + Q++ IE K + WFQN + RE+
Sbjct: 18 RYTP--EQVEALERLY--NDCPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 73
Query: 93 KKK 95
+K+
Sbjct: 74 RKE 76
>sp|P28166|ZFH1_DROME Zinc finger protein 1 OS=Drosophila melanogaster GN=zfh1 PE=1 SV=2
Length = 1054
Score = 35.0 bits (79), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 39 DQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARERLKKKIEG 98
+Q + LK+ Y N P+ ++ + I+ARL +++ + V WFQN ++RER + +
Sbjct: 709 EQQQQLKQHYSLNA--RPSRDEFRMIAARL----QLDPRVVQVWFQNNRSRERKMQSFQN 762
Query: 99 SSTS-AADNLPMHQRPAAATNWKPEDFANK 127
+ + AA +P+ + + +P D + K
Sbjct: 763 NQAAGAAPPMPIDSQASLTREDQPLDLSVK 792
>sp|Q9ZU11|ATB15_ARATH Homeobox-leucine zipper protein ATHB-15 OS=Arabidopsis thaliana
GN=ATHB-15 PE=1 SV=1
Length = 836
Score = 34.7 bits (78), Expect = 0.65, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 33 RWTPTTDQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARERL 92
R+TP +Q+ L+ LY++ P++ + Q++ IE K + WFQN + RE+
Sbjct: 20 RYTP--EQVEALERLYHD--CPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ 75
Query: 93 KKK 95
+K+
Sbjct: 76 RKE 78
>sp|Q0JKX1|HOX3_ORYSJ Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp.
japonica GN=HOX3 PE=1 SV=1
Length = 229
Score = 34.3 bits (77), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 39 DQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARERLKK 94
+Q R+L+E + N +P ++ I +LR + V WFQN +AR +LK+
Sbjct: 85 EQSRLLEESFRLNHTLTPKQKEALAIKLKLR------PRQVEVWFQNRRARTKLKQ 134
>sp|Q9XH38|HOX3_ORYSI Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. indica
GN=HOX3 PE=1 SV=1
Length = 229
Score = 34.3 bits (77), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 39 DQIRILKELYYNNGVRSPTAEQIQKISARLRQYGKIEGKNVFYWFQNYKARERLKK 94
+Q R+L+E + N +P ++ I +LR + V WFQN +AR +LK+
Sbjct: 85 EQSRLLEESFRLNHTLTPKQKEALAIKLKLR------PRQVEVWFQNRRARTKLKQ 134
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.128 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,376,262
Number of Sequences: 539616
Number of extensions: 4956115
Number of successful extensions: 14451
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 14296
Number of HSP's gapped (non-prelim): 149
length of query: 266
length of database: 191,569,459
effective HSP length: 115
effective length of query: 151
effective length of database: 129,513,619
effective search space: 19556556469
effective search space used: 19556556469
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)