Query 046373
Match_columns 364
No_of_seqs 216 out of 3323
Neff 10.9
Searched_HMMs 29240
Date Mon Mar 25 20:08:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046373.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046373hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 3E-51 1E-55 374.3 21.6 302 5-325 13-352 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 4.7E-51 1.6E-55 373.1 22.8 276 31-324 5-285 (437)
3 1wdy_A 2-5A-dependent ribonucl 100.0 2E-44 6.9E-49 310.2 23.0 264 6-314 5-283 (285)
4 3utm_A Tankyrase-1; tankyrase, 100.0 1.8E-44 6.1E-49 319.9 21.9 278 31-325 15-321 (351)
5 4g8k_A 2-5A-dependent ribonucl 100.0 1.1E-43 3.9E-48 313.1 23.0 282 7-312 26-329 (337)
6 1wdy_A 2-5A-dependent ribonucl 100.0 5.2E-42 1.8E-46 295.1 21.9 255 38-328 3-264 (285)
7 2xai_A ASB-9, ankyrin repeat a 100.0 1.3E-42 4.6E-47 295.0 17.0 244 39-330 2-251 (261)
8 3d9h_A CDNA FLJ77766, highly s 100.0 6.3E-42 2.2E-46 294.4 21.4 244 39-326 14-264 (285)
9 3d9h_A CDNA FLJ77766, highly s 100.0 6.6E-42 2.2E-46 294.3 18.2 256 5-310 14-280 (285)
10 2fo1_E LIN-12 protein; beta-ba 100.0 1.1E-41 3.6E-46 304.2 19.9 268 5-309 93-371 (373)
11 3utm_A Tankyrase-1; tankyrase, 100.0 5.1E-41 1.8E-45 297.7 23.6 296 7-327 25-349 (351)
12 4g8k_A 2-5A-dependent ribonucl 100.0 2E-40 6.7E-45 292.4 23.6 272 36-329 21-313 (337)
13 1yyh_A HN1;, notch 1, ankyrin 100.0 9.5E-41 3.2E-45 282.3 19.1 226 33-301 3-242 (253)
14 2fo1_E LIN-12 protein; beta-ba 100.0 1.2E-41 4.1E-46 303.9 14.2 246 36-329 90-358 (373)
15 3ljn_A Hypothetical protein; a 100.0 1.7E-41 5.8E-46 302.4 14.3 252 31-328 11-300 (364)
16 2xai_A ASB-9, ankyrin repeat a 100.0 2.6E-41 8.8E-46 287.1 14.1 249 5-299 2-255 (261)
17 1k1a_A B-cell lymphoma 3-encod 100.0 1.5E-40 5E-45 279.2 18.0 230 35-305 4-237 (241)
18 1oy3_D Transcription factor in 100.0 4.1E-40 1.4E-44 283.0 21.1 248 72-328 2-269 (282)
19 1yyh_A HN1;, notch 1, ankyrin 100.0 2.9E-40 9.8E-45 279.4 18.5 221 71-330 2-236 (253)
20 3b7b_A Euchromatic histone-lys 100.0 1.9E-39 6.3E-44 271.8 23.0 220 71-330 3-223 (237)
21 3b7b_A Euchromatic histone-lys 100.0 1.5E-39 5.2E-44 272.3 19.2 217 35-294 6-222 (237)
22 1k1a_A B-cell lymphoma 3-encod 100.0 3.8E-39 1.3E-43 270.5 20.2 223 72-330 2-229 (241)
23 3ljn_A Hypothetical protein; a 100.0 1.1E-40 3.7E-45 297.2 10.9 258 7-309 21-314 (364)
24 3aji_A 26S proteasome non-ATPa 100.0 2.4E-39 8.1E-44 270.0 18.0 225 39-308 5-229 (231)
25 3aji_A 26S proteasome non-ATPa 100.0 2.4E-39 8.1E-44 270.1 18.0 213 78-329 5-217 (231)
26 2dzn_A Probable 26S proteasome 100.0 1.9E-38 6.6E-43 264.0 21.9 210 79-326 2-217 (228)
27 1oy3_D Transcription factor in 100.0 5.9E-39 2E-43 275.8 19.0 220 36-294 5-270 (282)
28 4b93_B Ankyrin repeat domain-c 100.0 7.2E-39 2.4E-43 272.4 13.5 220 75-329 7-230 (269)
29 2dzn_A Probable 26S proteasome 100.0 7E-38 2.4E-42 260.6 19.3 214 40-293 2-219 (228)
30 4b93_B Ankyrin repeat domain-c 100.0 5.9E-39 2E-43 272.9 13.0 211 7-258 12-230 (269)
31 2f8y_A Notch homolog 1, transl 100.0 4E-37 1.4E-41 255.2 19.0 214 53-309 2-216 (223)
32 3kea_A K1L; tropism, ANK repea 100.0 2.5E-38 8.6E-43 271.9 11.4 253 13-325 6-260 (285)
33 3eu9_A Huntingtin-interacting 100.0 3.9E-37 1.3E-41 258.0 18.1 229 37-310 6-236 (240)
34 1s70_B 130 kDa myosin-binding 100.0 4.7E-37 1.6E-41 266.3 17.2 236 39-327 39-275 (299)
35 2f8y_A Notch homolog 1, transl 100.0 1.2E-36 4.1E-41 252.2 18.0 211 17-268 2-213 (223)
36 3eu9_A Huntingtin-interacting 100.0 2.9E-36 1E-40 252.6 19.9 220 72-330 2-223 (240)
37 1s70_B 130 kDa myosin-binding 100.0 3.3E-38 1.1E-42 273.6 7.9 235 7-292 41-275 (299)
38 1ikn_D Protein (I-kappa-B-alph 100.0 7.7E-37 2.6E-41 255.7 9.5 221 75-325 4-227 (236)
39 3kea_A K1L; tropism, ANK repea 100.0 7.7E-36 2.6E-40 256.4 15.7 201 71-315 23-226 (285)
40 1ikn_D Protein (I-kappa-B-alph 100.0 1.8E-36 6.1E-41 253.5 10.9 221 35-293 3-230 (236)
41 2rfa_A Transient receptor pote 100.0 9E-35 3.1E-39 242.4 19.9 203 39-277 2-225 (232)
42 1sw6_A Regulatory protein SWI6 100.0 5.4E-36 1.8E-40 262.4 10.8 260 38-327 21-326 (327)
43 2rfa_A Transient receptor pote 100.0 9.7E-35 3.3E-39 242.3 16.4 209 78-312 2-225 (232)
44 2pnn_A Transient receptor pote 100.0 3.4E-34 1.2E-38 245.0 18.0 220 33-286 6-271 (273)
45 2etb_A Transient receptor pote 100.0 2.5E-34 8.7E-39 243.4 15.3 199 39-268 1-243 (256)
46 2pnn_A Transient receptor pote 100.0 1.4E-34 4.7E-39 247.4 11.7 233 69-322 3-272 (273)
47 3hra_A Ankyrin repeat family p 100.0 4.7E-33 1.6E-37 226.8 20.2 181 78-294 4-190 (201)
48 3hra_A Ankyrin repeat family p 100.0 4.9E-33 1.7E-37 226.7 19.7 192 38-268 3-200 (201)
49 1sw6_A Regulatory protein SWI6 100.0 1.8E-35 6.2E-40 259.1 5.6 227 15-293 56-327 (327)
50 2etb_A Transient receptor pote 100.0 8.9E-34 3.1E-38 240.0 13.5 207 78-310 1-247 (256)
51 4gpm_A Engineered protein OR26 100.0 8.1E-34 2.8E-38 223.4 11.1 162 5-179 3-164 (169)
52 4gpm_A Engineered protein OR26 100.0 5.5E-32 1.9E-36 212.9 19.2 152 82-268 7-158 (169)
53 3jxi_A Vanilloid receptor-rela 100.0 1.2E-32 4.1E-37 233.6 14.8 200 38-268 3-247 (260)
54 3jxi_A Vanilloid receptor-rela 100.0 4.5E-32 1.5E-36 230.1 12.4 210 76-310 2-251 (260)
55 3v30_A DNA-binding protein rfx 100.0 4.8E-30 1.6E-34 203.6 17.3 170 79-285 2-171 (172)
56 2rfm_A Putative ankyrin repeat 100.0 8.4E-30 2.9E-34 205.9 18.6 163 71-268 27-189 (192)
57 4hbd_A KN motif and ankyrin re 100.0 1.8E-30 6.1E-35 221.8 15.1 191 79-306 76-272 (276)
58 3v30_A DNA-binding protein rfx 100.0 2.2E-30 7.6E-35 205.5 14.3 170 117-320 2-171 (172)
59 4hbd_A KN motif and ankyrin re 100.0 2.4E-30 8.3E-35 221.0 14.7 193 38-268 74-272 (276)
60 2rfm_A Putative ankyrin repeat 100.0 1.5E-29 5E-34 204.5 17.1 162 34-235 29-190 (192)
61 2vge_A RELA-associated inhibit 100.0 2.6E-31 9E-36 220.3 4.7 197 96-332 2-203 (229)
62 3v31_A Ankyrin repeat family A 100.0 8.3E-29 2.8E-33 195.4 18.2 156 78-268 2-157 (167)
63 1ihb_A P18-INK4C(INK6), cyclin 100.0 2.6E-29 8.7E-34 197.3 14.8 156 78-268 4-159 (162)
64 1ihb_A P18-INK4C(INK6), cyclin 100.0 6E-30 2E-34 200.9 10.7 158 6-176 5-162 (162)
65 2vge_A RELA-associated inhibit 100.0 1E-31 3.4E-36 222.9 0.1 192 72-303 14-209 (229)
66 3v31_A Ankyrin repeat family A 100.0 4.5E-29 1.5E-33 196.9 14.5 160 39-238 2-161 (167)
67 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.1E-28 7.3E-33 193.4 18.0 157 77-268 12-168 (169)
68 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.2E-28 7.5E-33 193.3 16.6 160 113-307 10-169 (169)
69 2aja_A Ankyrin repeat family p 100.0 3.9E-32 1.3E-36 240.2 -6.4 234 80-328 93-360 (376)
70 3f6q_A Integrin-linked protein 100.0 1E-28 3.5E-33 197.2 14.0 165 78-279 4-168 (179)
71 1awc_B Protein (GA binding pro 100.0 4.6E-28 1.6E-32 188.2 16.7 150 80-265 3-152 (153)
72 3f6q_A Integrin-linked protein 100.0 2.2E-28 7.4E-33 195.3 15.1 168 116-317 4-171 (179)
73 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.1E-29 3.8E-34 212.4 7.0 207 76-325 2-226 (239)
74 1awc_B Protein (GA binding pro 100.0 4.5E-28 1.5E-32 188.3 15.1 149 117-299 2-150 (153)
75 3twr_A Tankyrase-2; ankyrin re 100.0 1.9E-28 6.4E-33 193.0 12.6 159 114-307 5-163 (165)
76 3twr_A Tankyrase-2; ankyrin re 100.0 4.5E-29 1.5E-33 196.5 8.6 161 2-175 4-164 (165)
77 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.4E-27 4.9E-32 186.1 16.3 154 79-268 2-155 (156)
78 2aja_A Ankyrin repeat family p 100.0 1.9E-31 6.4E-36 235.8 -6.9 261 6-302 92-369 (376)
79 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.8E-28 6E-33 205.1 8.7 184 114-333 2-197 (239)
80 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.9E-27 9.9E-32 184.4 13.7 154 40-234 2-155 (156)
81 1d9s_A Cyclin-dependent kinase 99.9 6.8E-26 2.3E-30 172.2 11.6 134 69-237 2-136 (136)
82 3t8k_A Uncharacterized protein 99.9 3.3E-26 1.1E-30 183.0 8.5 158 79-268 6-176 (186)
83 1bi7_B P16INK4A, MTS1, multipl 99.9 1.2E-25 4E-30 175.2 11.0 141 113-287 8-149 (156)
84 1bi7_B P16INK4A, MTS1, multipl 99.9 9.5E-26 3.3E-30 175.6 9.1 144 146-324 7-151 (156)
85 3t8k_A Uncharacterized protein 99.9 1.3E-26 4.5E-31 185.3 2.7 159 6-178 6-181 (186)
86 1d9s_A Cyclin-dependent kinase 99.9 6.4E-26 2.2E-30 172.3 6.1 130 34-176 6-136 (136)
87 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.7E-24 9.3E-29 161.0 13.0 126 39-176 1-126 (126)
88 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.3E-23 4.3E-28 157.3 15.6 126 78-237 1-126 (126)
89 2jab_A H10-2-G3; HER2, darpin, 99.9 2.4E-24 8.3E-29 163.6 10.2 128 35-174 9-136 (136)
90 2jab_A H10-2-G3; HER2, darpin, 99.9 9.3E-24 3.2E-28 160.3 12.6 127 75-235 10-136 (136)
91 3deo_A Signal recognition part 99.9 3.5E-24 1.2E-28 171.3 10.7 141 76-234 41-181 (183)
92 3ui2_A Signal recognition part 99.9 1.1E-23 3.6E-28 176.5 11.9 142 76-235 42-183 (244)
93 3c5r_A BARD-1, BRCA1-associate 99.9 4.6E-23 1.6E-27 156.8 8.7 78 213-294 44-121 (137)
94 3c5r_A BARD-1, BRCA1-associate 99.9 1.9E-22 6.4E-27 153.3 11.3 114 74-193 5-118 (137)
95 2b0o_E UPLC1; arfgap, structur 99.9 2.6E-22 8.9E-27 172.9 13.1 138 151-328 151-297 (301)
96 3aaa_C Myotrophin, protein V-1 99.9 6.6E-22 2.3E-26 147.3 11.4 111 76-192 4-114 (123)
97 2b0o_E UPLC1; arfgap, structur 99.9 3.7E-22 1.3E-26 171.9 10.9 144 113-294 147-298 (301)
98 3aaa_C Myotrophin, protein V-1 99.9 7.5E-22 2.6E-26 147.0 10.3 109 211-325 6-114 (123)
99 3ehr_A Osteoclast-stimulating 99.9 2E-22 6.9E-27 166.4 7.7 125 114-268 70-195 (222)
100 3ehr_A Osteoclast-stimulating 99.9 9.6E-23 3.3E-27 168.3 5.4 165 8-184 27-206 (222)
101 3deo_A Signal recognition part 99.9 4.9E-22 1.7E-26 158.8 7.8 110 39-161 43-153 (183)
102 3jue_A Arfgap with coiled-coil 99.9 3E-21 1E-25 170.0 12.9 148 117-294 199-349 (368)
103 3ui2_A Signal recognition part 99.9 7.3E-22 2.5E-26 165.3 8.4 135 9-160 18-153 (244)
104 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.2E-20 4.1E-25 133.0 11.1 93 78-176 1-93 (93)
105 1dcq_A PYK2-associated protein 99.8 1.6E-20 5.6E-25 159.8 10.8 199 74-309 61-263 (278)
106 3jue_A Arfgap with coiled-coil 99.8 4.1E-20 1.4E-24 162.7 11.7 146 150-325 198-345 (368)
107 2l6b_A NR1C; ankyrin, consensu 99.8 1.1E-20 3.7E-25 138.9 6.4 109 74-188 4-112 (115)
108 3lvq_E ARF-GAP with SH3 domain 99.8 1.4E-19 4.6E-24 167.1 14.9 135 80-255 133-276 (497)
109 3lvq_E ARF-GAP with SH3 domain 99.8 4.2E-20 1.4E-24 170.5 11.4 127 42-180 134-269 (497)
110 1dcq_A PYK2-associated protein 99.8 1.3E-19 4.4E-24 154.3 13.0 130 80-238 131-264 (278)
111 1n0q_A 3ANK, 3 ankyrin repeats 99.8 4.6E-20 1.6E-24 130.0 8.3 93 39-142 1-93 (93)
112 2l6b_A NR1C; ankyrin, consensu 99.8 9.7E-20 3.3E-24 133.8 7.3 107 209-321 6-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.7 1.6E-17 5.5E-22 120.7 8.8 95 70-170 15-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 3.2E-16 1.1E-20 113.7 10.5 90 147-265 20-109 (110)
115 1gp8_A Protein (scaffolding pr 64.8 2.3 7.8E-05 22.7 0.9 20 7-26 14-33 (40)
116 3gvo_A Pumilio 2, pumilio homo 49.6 41 0.0014 28.7 6.8 265 31-327 28-306 (351)
117 3k49_A MRNA-binding protein PU 45.9 56 0.0019 28.1 7.1 26 243-268 261-286 (369)
118 3gvo_A Pumilio 2, pumilio homo 31.8 42 0.0014 28.6 4.0 224 76-326 34-262 (351)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3e-51 Score=374.33 Aligned_cols=302 Identities=25% Similarity=0.266 Sum_probs=170.7
Q ss_pred CCChhHHHHHhcCChHHhhhccCChhHHHhhhhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHH
Q 046373 5 SIYPNFFNAAAAGDAETFKRNTTSDEIESLLTAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLH 84 (364)
Q Consensus 5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~ 84 (364)
...++||.|+..|++++|++|++.+ .+....+..|.||||+| +..|+.+++++|++. +.+++..+..|.||||
T Consensus 13 ~g~t~L~~Aa~~g~~~~v~~Ll~~g-~~~~~~~~~~~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~ 85 (437)
T 1n11_A 13 SGLTPLHVASFMGHLPIVKNLLQRG-ASPNVSNVKVETPLHMA--ARAGHTEVAKYLLQN----KAKVNAKAKDDQTPLH 85 (437)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTT-CCSCCSSSCCCCHHHHH--HHHTCHHHHHHHHHH----TCCSSCCCTTSCCHHH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHH--HHcCCHHHHHHHHhC----CCCCCCCCCCCCCHHH
Confidence 3457888888888888888888876 55556666788888888 888888888888876 6777777788888888
Q ss_pred HHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCH
Q 046373 85 LAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYS 164 (364)
Q Consensus 85 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~ 164 (364)
+|+..|+.++|++|++++++ ++..+..|.||||+|+..|+.+++++|++.+.+.. ..+..|.||||+|+..|+.
T Consensus 86 ~A~~~g~~~~v~~Ll~~ga~-----~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~-~~~~~g~t~L~~A~~~g~~ 159 (437)
T 1n11_A 86 CAARIGHTNMVKLLLENNAN-----PNLATTAGHTPLHIAAREGHVETVLALLEKEASQA-CMTKKGFTPLHVAAKYGKV 159 (437)
T ss_dssp HHHHHTCHHHHHHHHHHTCC-----TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHTTCH
T ss_pred HHHHCCCHHHHHHHHhCCCC-----CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCc-CCCCCCCCHHHHHHHcCCH
Confidence 88888888888888887765 34455555555555555555555555555554433 3334445555555555555
Q ss_pred HHHHHHHHcCCCCCCCCCCCCChHHHHHHh---------------------------------hhhhcchhhhhh-----
Q 046373 165 EMVIELLENCTSVSHEGPNGKTALHAAAMH---------------------------------FYFENDQTAADI----- 206 (364)
Q Consensus 165 ~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~---------------------------------~~~~~~~~~~~~----- 206 (364)
+++++|++.|++++..+..|.||||+|+.. ..++....+...
T Consensus 160 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 239 (437)
T 1n11_A 160 RVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSAN 239 (437)
T ss_dssp HHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 555555555554444444444444444443 111111111110
Q ss_pred hccCCCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHH
Q 046373 207 ADKDRKMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPL 286 (364)
Q Consensus 207 ~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L 286 (364)
.....|.||||.|+..|+.+++++|++++++ .+..+..|+||||+|+..|+.+++++|+++ +++++.+|..|.|||
T Consensus 240 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~~~~g~t~L 315 (437)
T 1n11_A 240 AESVQGVTPLHLAAQEGHAEMVALLLSKQAN-GNLGNKSGLTPLHLVAQEGHVPVADVLIKH---GVMVDATTRMGYTPL 315 (437)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHH---TCCTTCCCSSCCCHH
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhC---CccCCCCCCCCCCHH
Confidence 1112344555555555555555555555444 234444444444444444444444444444 444555555555555
Q ss_pred HHHHhcCCcceeehhhhcccCCcccccccCCCchhHHhh
Q 046373 287 HVLAAIRPKEFFKIKVRYDAGGNYGAVNKQNVSVTDVLI 325 (364)
Q Consensus 287 ~~A~~~~~~~~~~~~ll~~~~~~~~~~n~~g~t~l~~a~ 325 (364)
|+|+..|+ ...+.+|+++|++++.+|..|+||||+|+
T Consensus 316 ~~A~~~g~--~~~v~~Ll~~gad~n~~~~~g~t~L~~A~ 352 (437)
T 1n11_A 316 HVASHYGN--IKLVKFLLQHQADVNAKTKLGYSPLHQAA 352 (437)
T ss_dssp HHHHHSSC--SHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHcCc--HHHHHHHHhcCCCCCCCCCCCCCHHHHHH
Confidence 55555555 33444444455555555555555555553
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.7e-51 Score=373.05 Aligned_cols=276 Identities=23% Similarity=0.218 Sum_probs=199.4
Q ss_pred HHHhhhhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhh
Q 046373 31 IESLLTAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMM 110 (364)
Q Consensus 31 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 110 (364)
.+....+..|.||||+| +..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++++++ +
T Consensus 5 ~~~~~~~~~g~t~L~~A--a~~g~~~~v~~Ll~~----g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-----~ 73 (437)
T 1n11_A 5 ISGGGGGESGLTPLHVA--SFMGHLPIVKNLLQR----GASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAK-----V 73 (437)
T ss_dssp ----------CCHHHHH--HHHTCHHHHHHHHHT----TCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCC-----S
T ss_pred CCccccCCCCCCHHHHH--HHCCCHHHHHHHHHc----CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-----C
Confidence 44556677999999999 999999999999986 788899999999999999999999999999999976 7
Q ss_pred hcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHH
Q 046373 111 RMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHA 190 (364)
Q Consensus 111 ~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~ 190 (364)
+..+..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|++.+++.+..+..|.||||+
T Consensus 74 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~ 152 (437)
T 1n11_A 74 NAKAKDDQTPLHCAARIGHTNMVKLLLENNANPN-LATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHV 152 (437)
T ss_dssp SCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTT-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHH
T ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCC-CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHH
Confidence 8889999999999999999999999999999866 678889999999999999999999999999999999999999999
Q ss_pred HHHhhhhhcchhhhhh-----hccCCCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHH
Q 046373 191 AAMHFYFENDQTAADI-----ADKDRKMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKIL 265 (364)
Q Consensus 191 a~~~~~~~~~~~~~~~-----~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~l 265 (364)
|+....++....+... .....|.||||.|+..|+.+++++|++++.++ +..+..|.||||+|+..++.+++++|
T Consensus 153 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~L 231 (437)
T 1n11_A 153 AAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSP-HSPAWNGYTPLHIAAKQNQVEVARSL 231 (437)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCS-CCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 9988444433333221 11235667777777777777777777666653 44455555555555555555555555
Q ss_pred HhCcccccccccCCCCCCcHHHHHHhcCCcceeehhhhcccCCcccccccCCCchhHHh
Q 046373 266 LKNPLARSLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRYDAGGNYGAVNKQNVSVTDVL 324 (364)
Q Consensus 266 l~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~~~~~~~~n~~g~t~l~~a 324 (364)
++. +++++.++..|.||||+|+..|+ ...+.+|+++|++++..|..|+||||+|
T Consensus 232 l~~---g~~~~~~~~~g~t~L~~A~~~g~--~~~v~~Ll~~~~~~~~~~~~g~t~L~~A 285 (437)
T 1n11_A 232 LQY---GGSANAESVQGVTPLHLAAQEGH--AEMVALLLSKQANGNLGNKSGLTPLHLV 285 (437)
T ss_dssp HHT---TCCTTCCCTTCCCHHHHHHHTTC--HHHHHHHHTTTCCTTCCCTTCCCHHHHH
T ss_pred HHc---CCCCCCCCCCCCCHHHHHHHCCC--HHHHHHHHhcCCCCCCCCCCCCCHHHHH
Confidence 554 44455555555555555555554 3333333444444444444444444444
No 3
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2e-44 Score=310.23 Aligned_cols=264 Identities=19% Similarity=0.153 Sum_probs=234.0
Q ss_pred CChhHHHHHhcCChHHhhhccCChhHHHhhh-hccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHH
Q 046373 6 IYPNFFNAAAAGDAETFKRNTTSDEIESLLT-AQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLH 84 (364)
Q Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~ 84 (364)
..++|+.|++.|++++|++|++.+ .+.... +..|.||||+| +..|+.+++++|++. +.+++..+..|.||||
T Consensus 5 g~~~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~g~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~ 77 (285)
T 1wdy_A 5 DNHLLIKAVQNEDVDLVQQLLEGG-ANVNFQEEEGGWTPLHNA--VQMSREDIVELLLRH----GADPVLRKKNGATPFL 77 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTCCCHHH
T ss_pred cchHHHHHHHcCCHHHHHHHHHcC-CCcccccCCCCCcHHHHH--HHcCCHHHHHHHHHc----CCCCcccCCCCCCHHH
Confidence 357899999999999999999987 444433 66899999999 999999999999986 7888899999999999
Q ss_pred HHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCC---------CcCCchHH
Q 046373 85 LAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSE---------NKYGKTSL 155 (364)
Q Consensus 85 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~---------~~~~~t~l 155 (364)
+|+..|+.+++++|++++++ ++..+..|.||||+|+..|+.+++++|+++++++.... +..|.|||
T Consensus 78 ~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L 152 (285)
T 1wdy_A 78 LAAIAGSVKLLKLFLSKGAD-----VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATAL 152 (285)
T ss_dssp HHHHHTCHHHHHHHHHTTCC-----TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHH
T ss_pred HHHHcCCHHHHHHHHHcCCC-----CCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHH
Confidence 99999999999999999876 67889999999999999999999999999998876332 66799999
Q ss_pred HHHHhcCCHHHHHHHHHc-CCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCC----HHHHHH
Q 046373 156 YMAAEGRYSEMVIELLEN-CTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGH----ARTVET 230 (364)
Q Consensus 156 ~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~----~~~~~~ 230 (364)
|+|+..|+.+++++|++. |++++..+.. |.||||.|+..++ .+++++
T Consensus 153 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~----------------------------g~t~l~~a~~~~~~~~~~~i~~~ 204 (285)
T 1wdy_A 153 MDAAEKGHVEVLKILLDEMGADVNACDNM----------------------------GRNALIHALLSSDDSDVEAITHL 204 (285)
T ss_dssp HHHHHHTCHHHHHHHHHTSCCCTTCCCTT----------------------------SCCHHHHHHHCSCTTTHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHhcCCCCCccCCC----------------------------CCCHHHHHHHccccchHHHHHHH
Confidence 999999999999999997 8888776654 5566666666666 899999
Q ss_pred HHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCCcceeehhhhcccCCcc
Q 046373 231 ILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRYDAGGNY 310 (364)
Q Consensus 231 Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~~~~~ 310 (364)
|+++|.+ ++.++..|+||||+|+..++.+++++|++. .+++++.+|..|.||||+|++.++ ...+.+|+++|+++
T Consensus 205 Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~g~~~~~~~~~g~t~l~~A~~~~~--~~i~~~Ll~~Ga~~ 279 (285)
T 1wdy_A 205 LLDHGAD-VNVRGERGKTPLILAVEKKHLGLVQRLLEQ--EHIEINDTDSDGKTALLLAVELKL--KKIAELLCKRGAST 279 (285)
T ss_dssp HHHTTCC-SSCCCTTSCCHHHHHHHTTCHHHHHHHHHS--SSCCTTCCCTTSCCHHHHHHHTTC--HHHHHHHHHHSSCS
T ss_pred HHHcCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhc--cCCCccccCCCCCcHHHHHHHcCc--HHHHHHHHHcCCCC
Confidence 9999998 588899999999999999999999999983 289999999999999999999999 67778888999999
Q ss_pred cccc
Q 046373 311 GAVN 314 (364)
Q Consensus 311 ~~~n 314 (364)
+.+|
T Consensus 280 ~~~d 283 (285)
T 1wdy_A 280 DCGD 283 (285)
T ss_dssp CCSS
T ss_pred Cccc
Confidence 8776
No 4
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.8e-44 Score=319.92 Aligned_cols=278 Identities=19% Similarity=0.167 Sum_probs=241.0
Q ss_pred HHHhhhhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhh
Q 046373 31 IESLLTAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMM 110 (364)
Q Consensus 31 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 110 (364)
.+....+..+.++||.| ++.|+.+.++.++. ..+.+++..|..|.||||+|+..|+.+++++|++++++ +
T Consensus 15 ~~~~~~~~~~~~~L~~A--~~~g~~~~v~~ll~---~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~ 84 (351)
T 3utm_A 15 AKAVLTGEYKKDELLEA--ARSGNEEKLMALLT---PLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD-----V 84 (351)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTCHHHHHHHCC---TTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----T
T ss_pred eeeeeeccccchhHHHH--HHcCCHHHHHHHHH---hcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----C
Confidence 55556677889999999 99999988888866 45777888899999999999999999999999999876 6
Q ss_pred hcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHH
Q 046373 111 RMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHA 190 (364)
Q Consensus 111 ~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~ 190 (364)
+..+..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|++++..+..|.+|+++
T Consensus 85 ~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~ 163 (351)
T 3utm_A 85 HAKDKGGLVPLHNACSYGHYEVTELLLKHGACVN-AMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDM 163 (351)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHH
Confidence 7888999999999999999999999999998866 677889999999999999999999999999999999999999988
Q ss_pred HHHhhhhhcc--------------------------hhhhhhhccCCCchHHHHHHhc---CCHHHHHHHHhcCCccccc
Q 046373 191 AAMHFYFEND--------------------------QTAADIADKDRKMTALHLAAGQ---GHARTVETILFLDPKCYEL 241 (364)
Q Consensus 191 a~~~~~~~~~--------------------------~~~~~~~~~~~~~t~L~~a~~~---~~~~~~~~Ll~~~~~~~~~ 241 (364)
++.....+.. ...........+.||||.|+.. +..+++++|++++.+ ++.
T Consensus 164 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~-~~~ 242 (351)
T 3utm_A 164 APTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGAN-VNE 242 (351)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCC-TTC
T ss_pred HhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCC-cCC
Confidence 7543111110 0011122345788999999999 568999999999999 588
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCCcceeehhhhcccCCcccccccCCCchh
Q 046373 242 VDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRYDAGGNYGAVNKQNVSVT 321 (364)
Q Consensus 242 ~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~~~~~~~~n~~g~t~l 321 (364)
++..|+||||+|+..|+.+++++|+++ |++++.+|..|.||||+|+..|+ ...+.+|+++|++++.+|..|+||+
T Consensus 243 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~---ga~~n~~d~~g~t~L~~A~~~~~--~~~v~~Ll~~gad~~~~~~~g~tal 317 (351)
T 3utm_A 243 KNKDFMTPLHVAAERAHNDVMEVLHKH---GAKMNALDSLGQTALHRAALAGH--LQTCRLLLSYGSDPSIISLQGFTAA 317 (351)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHHTC--HHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCCCCcCCCCCCHHHHHHHcCc--HHHHHHHHHcCCCCCCcCCCCCChh
Confidence 999999999999999999999999998 99999999999999999999999 7778888899999999999999999
Q ss_pred HHhh
Q 046373 322 DVLI 325 (364)
Q Consensus 322 ~~a~ 325 (364)
++|.
T Consensus 318 ~~a~ 321 (351)
T 3utm_A 318 QMGN 321 (351)
T ss_dssp HHSC
T ss_pred hhhh
Confidence 9994
No 5
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.1e-43 Score=313.14 Aligned_cols=282 Identities=19% Similarity=0.138 Sum_probs=237.2
Q ss_pred ChhHHHHHhcCChHHhhhccCChhHHHhhhh-ccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHH
Q 046373 7 YPNFFNAAAAGDAETFKRNTTSDEIESLLTA-QTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHL 85 (364)
Q Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~ 85 (364)
.++|+.|++.|++++|++|++.| .+.+..+ ..|.||||+| +..|+.+++++|+++ +++++..+..+.++++.
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~G-advn~~~~~~g~TpLh~A--~~~g~~~iv~~Ll~~----ga~~~~~~~~~~~~~~~ 98 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEGG-ANVNFQEEEGGWTPLHNA--VQMSREDIVELLLRH----GADPVLRKKNGATPFIL 98 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTCCCHHHH
T ss_pred ChHHHHHHHcCCHHHHHHHHHCC-CCCCccCCCCCcCHHHHH--HHcCCHHHHHHHHHc----CCchhhhccCCCchhHH
Confidence 46899999999999999999988 7666444 4599999999 999999999999997 88899999999999999
Q ss_pred HHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCC---------CCCcCCchHHH
Q 046373 86 AAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPY---------SENKYGKTSLY 156 (364)
Q Consensus 86 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~---------~~~~~~~t~l~ 156 (364)
++..+...++..+++.+.+ ++..+..|.||||+|+..|+.+++++|+++|++++. ..+..|.||||
T Consensus 99 ~~~~~~~~~~~~~~~~~~~-----~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~ 173 (337)
T 4g8k_A 99 AAIAGSVKLLKLFLSKGAD-----VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALM 173 (337)
T ss_dssp HHHHTCHHHHHHHHTTTCC-----TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHH
T ss_pred HHhcccchhhHHhhhccch-----hhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHH
Confidence 9999999999999998866 788899999999999999999999999999887642 23446899999
Q ss_pred HHHhcCCHHHHHHHHH-cCCCCCCCCCCCCChHHHHHHh-----------hhhhcchhhhhhhccCCCchHHHHHHhcCC
Q 046373 157 MAAEGRYSEMVIELLE-NCTSVSHEGPNGKTALHAAAMH-----------FYFENDQTAADIADKDRKMTALHLAAGQGH 224 (364)
Q Consensus 157 ~A~~~~~~~~v~~Ll~-~~~~~~~~~~~~~~~l~~a~~~-----------~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~ 224 (364)
+|+..|+.+++++|++ .|++++..+..|.|+++.++.. .+++.+... ......|.||||.|+..|+
T Consensus 174 ~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~--n~~d~~g~t~L~~a~~~~~ 251 (337)
T 4g8k_A 174 DAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV--NVRGERGKTPLILAVEKKH 251 (337)
T ss_dssp HHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCT--TCCCGGGCCHHHHHHHTTC
T ss_pred HHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCC--CCcCCCCCCHHHHHHHhhh
Confidence 9999999999999996 5999999999999999987754 222222111 1123468899999999999
Q ss_pred HHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCCcceeehhhhc
Q 046373 225 ARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRY 304 (364)
Q Consensus 225 ~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~ 304 (364)
.++++.|++.....++.+|..|+||||+|+..|+.+++++|+++ |+++|. .+|||+|++.++ ..++.+|+
T Consensus 252 ~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~---GAd~n~-----~~~L~~A~~~~~--~~iv~~Ll 321 (337)
T 4g8k_A 252 LGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKR---GASTDC-----GDLVMTARRNYD--HSLVKVLL 321 (337)
T ss_dssp HHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTT---SCSSTT-----CCHHHHHHHTTC--HHHHHHHH
T ss_pred hHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCCCC-----CCHHHHHHHcCC--HHHHHHHH
Confidence 99999999864433688899999999999999999999999988 777754 469999999998 56677778
Q ss_pred ccCCcccc
Q 046373 305 DAGGNYGA 312 (364)
Q Consensus 305 ~~~~~~~~ 312 (364)
++||+++.
T Consensus 322 ~~GA~~d~ 329 (337)
T 4g8k_A 322 SHGAKEDF 329 (337)
T ss_dssp HTTCCC--
T ss_pred HCcCCCCC
Confidence 88988754
No 6
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=5.2e-42 Score=295.14 Aligned_cols=255 Identities=18% Similarity=0.149 Sum_probs=226.4
Q ss_pred ccCCchHHHHHHHHHhcCCChHHHHHHHhcCCcccccc-CCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCC
Q 046373 38 QTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQV-NAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNE 116 (364)
Q Consensus 38 ~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 116 (364)
.+|.|+||.| ++.|+.+++++|++. +.+++.. +..|.||||+|+..|+.+++++|++++++ ++..+..
T Consensus 3 ~~g~~~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~ 71 (285)
T 1wdy_A 3 VEDNHLLIKA--VQNEDVDLVQQLLEG----GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-----PVLRKKN 71 (285)
T ss_dssp HHHHHHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTT
T ss_pred cccchHHHHH--HHcCCHHHHHHHHHc----CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-----CcccCCC
Confidence 3688999999 999999999999985 5667766 78899999999999999999999999876 6788999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhh
Q 046373 117 KNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFY 196 (364)
Q Consensus 117 g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~ 196 (364)
|.||||+|+..|+.+++++|+++|+++. ..+..|.||||+|+..|+.+++++|++.|++++..+.....
T Consensus 72 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~---------- 140 (285)
T 1wdy_A 72 GATPFLLAAIAGSVKLLKLFLSKGADVN-ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKED---------- 140 (285)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTT-CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHH----------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHH----------
Confidence 9999999999999999999999999876 67888999999999999999999999999998766542210
Q ss_pred hhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhc-CCcccccccCCCCcHHHHHHHcCC----HHHHHHHHhCccc
Q 046373 197 FENDQTAADIADKDRKMTALHLAAGQGHARTVETILFL-DPKCYELVDHRGWNFLHYAMVSFK----LHELKILLKNPLA 271 (364)
Q Consensus 197 ~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~-~~~~~~~~d~~g~t~l~~a~~~~~----~~~~~~ll~~~~~ 271 (364)
.......+.||||.|+..|+.+++++|++. +.+ ++..|..|+||||+|+..++ .+++++|++.
T Consensus 141 --------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~--- 208 (285)
T 1wdy_A 141 --------QERLRKGGATALMDAAEKGHVEVLKILLDEMGAD-VNACDNMGRNALIHALLSSDDSDVEAITHLLLDH--- 208 (285)
T ss_dssp --------HHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCC-TTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHT---
T ss_pred --------HHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCC-CCccCCCCCCHHHHHHHccccchHHHHHHHHHHc---
Confidence 111234788999999999999999999988 666 68889999999999999999 9999999998
Q ss_pred ccccccCCCCCCcHHHHHHhcCCcceeehhhhcc-cCCcccccccCCCchhHHhhhcc
Q 046373 272 RSLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRYD-AGGNYGAVNKQNVSVTDVLIYGS 328 (364)
Q Consensus 272 ~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~-~~~~~~~~n~~g~t~l~~a~~~~ 328 (364)
+++++.+|..|.||||+|+..++ ...+.+|++ .|++++.+|..|+||||+|+..+
T Consensus 209 g~~~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~ 264 (285)
T 1wdy_A 209 GADVNVRGERGKTPLILAVEKKH--LGLVQRLLEQEHIEINDTDSDGKTALLLAVELK 264 (285)
T ss_dssp TCCSSCCCTTSCCHHHHHHHTTC--HHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCCCcCCCCCcHHHHHHHcCC--HHHHHHHHhccCCCccccCCCCCcHHHHHHHcC
Confidence 89999999999999999999999 666777777 89999999999999999997654
No 7
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.3e-42 Score=295.03 Aligned_cols=244 Identities=14% Similarity=0.094 Sum_probs=212.7
Q ss_pred cCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCC
Q 046373 39 TKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKN 118 (364)
Q Consensus 39 ~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~ 118 (364)
+|.||||+| +..|+.+++++|++. +.+++..|..|.||||+|+..|+.+++++|++++++ ++..+..|.
T Consensus 2 ~g~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~ 70 (261)
T 2xai_A 2 SDWSPMHEA--AIHGHQLSLRNLISQ----GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQ-----VNGVTADWH 70 (261)
T ss_dssp --CCHHHHH--HHHTCHHHHHHHHHT----TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSC
T ss_pred CCCCHHHHH--HHcCCHHHHHHHHHC----CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----CCCCCCCCC
Confidence 689999999 999999999999985 788999999999999999999999999999999876 788899999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhh
Q 046373 119 TALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFE 198 (364)
Q Consensus 119 t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~ 198 (364)
||||+|+..|+.+++++|+++|+++. .+..|.||||+|+..|+.+++++|++.|++++..+.
T Consensus 71 t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~---------------- 132 (261)
T 2xai_A 71 TPLFNACVSGSWDCVNLLLQHGASVQ--PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKIS---------------- 132 (261)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSS--CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBT----------------
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCC----------------
Confidence 99999999999999999999999875 344599999999999999999999999999876554
Q ss_pred cchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccC
Q 046373 199 NDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEG 278 (364)
Q Consensus 199 ~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~ 278 (364)
.|.||||.|+..|+.+++++|+++|+++ + .+..|+||||+|+..++.+++++|++. |++++.+
T Consensus 133 ------------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~-~~~~g~t~Lh~A~~~~~~~~v~~Ll~~---gad~~~~ 195 (261)
T 2xai_A 133 ------------HLGTPLYLACENQQRACVKKLLESGADV-N-QGKGQDSPLHAVARTASEELACLLMDF---GADTQAK 195 (261)
T ss_dssp ------------TTBCHHHHHHHTTCHHHHHHHHHHTCCT-T-CCBTTBCHHHHHHHHTCHHHHHHHHHT---TCCTTCC
T ss_pred ------------CCCCHHHHHHHhCCHHHHHHHHHcCCCC-C-CCCCCCChHHHHHHcCCHHHHHHHHHc---CCCCCCc
Confidence 5678888888899999999999999984 5 488999999999999999999999998 9999999
Q ss_pred CCCCCcHHHHHHhcCCcceeehhhhcccC------CcccccccCCCchhHHhhhcccc
Q 046373 279 DNNGNTPLHVLAAIRPKEFFKIKVRYDAG------GNYGAVNKQNVSVTDVLIYGSRE 330 (364)
Q Consensus 279 d~~g~t~L~~A~~~~~~~~~~~~ll~~~~------~~~~~~n~~g~t~l~~a~~~~~~ 330 (364)
|..|.||||+|+..+. +..+++..... .+++.+|..|+|++|.|.....+
T Consensus 196 d~~g~tpl~~A~~~~~--~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~~p 251 (261)
T 2xai_A 196 NAEGKRPVELVPPESP--LAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLP 251 (261)
T ss_dssp CTTSCCGGGGSCTTCT--HHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSSSC
T ss_pred CCCCCChhhhcccccc--HHHHHHhccCCccHHHHHHHHHHHHhchhccccCcccCCc
Confidence 9999999999997665 54444443222 24668899999999999754443
No 8
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.3e-42 Score=294.45 Aligned_cols=244 Identities=20% Similarity=0.175 Sum_probs=193.0
Q ss_pred cCCchHHHHHHHHHhcCCChHHHHHHHhc-------CCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhh
Q 046373 39 TKNTILHINIISQKRKNGSTKFIGEMLKK-------CPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMR 111 (364)
Q Consensus 39 ~g~t~L~~A~~~~~~~~~~~~~l~~~l~~-------~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 111 (364)
.|.|+||+| +..|+.+.+..++..-.. ....++..|..|+||||+|+..|+.+++++|++.+.+ ++
T Consensus 14 ~~~~~lH~A--a~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-----~~ 86 (285)
T 3d9h_A 14 LVPRGSHMA--SMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWA-----VN 86 (285)
T ss_dssp ------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCC-----SC
T ss_pred HHHHHHHHH--hhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCC-----CC
Confidence 889999999 999997666665543111 1233567788999999999999999999999999865 77
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHH
Q 046373 112 MTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAA 191 (364)
Q Consensus 112 ~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a 191 (364)
..+..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|++.|++++..
T Consensus 87 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----------- 154 (285)
T 3d9h_A 87 IITADHVSPLHEACLGGHLSCVKILLKHGAQVN-GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPE----------- 154 (285)
T ss_dssp EECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCS-----------
T ss_pred CcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCC-----------
Confidence 889999999999999999999999999998866 77888999999999999999999999999886522
Q ss_pred HHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCccc
Q 046373 192 AMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLA 271 (364)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~ 271 (364)
..|.||||.|+..|+.+++++|++++++ ++..|..|+||||+|+..++.+++++|++.
T Consensus 155 ------------------~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~--- 212 (285)
T 3d9h_A 155 ------------------SDLASPIHEAARRGHVECVNSLIAYGGN-IDHKISHLGTPLYLACENQQRACVKKLLES--- 212 (285)
T ss_dssp ------------------CTTSCHHHHHHHHTCHHHHHHHHHTTCC-TTCCBTTTBCHHHHHHHTTCHHHHHHHHHT---
T ss_pred ------------------CCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHC---
Confidence 2478899999999999999999999998 578899999999999999999999999998
Q ss_pred ccccccCCCCCCcHHHHHHhcCCcceeehhhhcccCCcccccccCCCchhHHhhh
Q 046373 272 RSLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRYDAGGNYGAVNKQNVSVTDVLIY 326 (364)
Q Consensus 272 ~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~~~~~~~~n~~g~t~l~~a~~ 326 (364)
+++++. +..|.||||+|+..++ ...+.+|+++|++++.+|..|+||+|+|+.
T Consensus 213 ga~~~~-~~~g~t~L~~A~~~~~--~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~ 264 (285)
T 3d9h_A 213 GADVNQ-GKGQDSPLHAVVRTAS--EELACLLMDFGADTQAKNAEGKRPVELVPP 264 (285)
T ss_dssp TCCTTC-CBTTBCHHHHHHHTTC--HHHHHHHHHTTCCTTCCCTTSCCGGGGSCT
T ss_pred CCCCCC-CCCCCCHHHHHHHcCC--HHHHHHHHHCCCCCCCcCCCCCCHHHHhcC
Confidence 888885 8889999999999999 666777778999999999999999999983
No 9
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.6e-42 Score=294.33 Aligned_cols=256 Identities=15% Similarity=0.099 Sum_probs=199.7
Q ss_pred CCChhHHHHHhcCChHHhhhccCChhH----------HHhhhhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccc
Q 046373 5 SIYPNFFNAAAAGDAETFKRNTTSDEI----------ESLLTAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQ 74 (364)
Q Consensus 5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~----------~~~~~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~ 74 (364)
...++||+|+..|+.+.+..++..++. .....+..|.||||+| +..|+.+++++|++. +.+++.
T Consensus 14 ~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~A--a~~g~~~~v~~Ll~~----g~~~~~ 87 (285)
T 3d9h_A 14 LVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEA--AIHGHQLSLRNLISQ----GWAVNI 87 (285)
T ss_dssp ----------------------------CCSEECCCCTTCSSSCCSCCHHHHH--HHTTCHHHHHHHHHT----TCCSCE
T ss_pred HHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHH--HHcCCHHHHHHHHHC----CCCCCC
Confidence 356899999999998777775443211 1235677999999999 999999999999985 788999
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchH
Q 046373 75 VNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTS 154 (364)
Q Consensus 75 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~ 154 (364)
.|.+|.||||+|+..|+.+++++|++++++ ++..+..|.||||+|+..|+.+++++|+++++++. .+..|.||
T Consensus 88 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~ 160 (285)
T 3d9h_A 88 ITADHVSPLHEACLGGHLSCVKILLKHGAQ-----VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ--PESDLASP 160 (285)
T ss_dssp ECTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS--CSCTTSCH
T ss_pred cCCCCCCHHHHHHHCCcHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCC--CCCCCCCH
Confidence 999999999999999999999999999866 78889999999999999999999999999999865 34459999
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhc
Q 046373 155 LYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFL 234 (364)
Q Consensus 155 l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~ 234 (364)
||+|+..|+.+++++|++.|++++..+. .|.||||.|+..|+.+++++|+++
T Consensus 161 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~----------------------------~g~t~L~~A~~~~~~~~v~~Ll~~ 212 (285)
T 3d9h_A 161 IHEAARRGHVECVNSLIAYGGNIDHKIS----------------------------HLGTPLYLACENQQRACVKKLLES 212 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCBT----------------------------TTBCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcCC----------------------------CCCCHHHHHHHcCcHHHHHHHHHC
Confidence 9999999999999999999999876554 577888889999999999999999
Q ss_pred CCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCCcceeehhhhccc-CCcc
Q 046373 235 DPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRYDA-GGNY 310 (364)
Q Consensus 235 ~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~-~~~~ 310 (364)
++++ + .+..|+||||+|+..++.+++++|+++ |++++.+|..|.||||+|+.. ...+.+|++. |+++
T Consensus 213 ga~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~---gad~~~~d~~g~t~l~~A~~~----~~~~~~Ll~~~~a~l 280 (285)
T 3d9h_A 213 GADV-N-QGKGQDSPLHAVVRTASEELACLLMDF---GADTQAKNAEGKRPVELVPPE----SPLAQLFLEREGASL 280 (285)
T ss_dssp TCCT-T-CCBTTBCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCGGGGSCTT----SHHHHHHHHHC----
T ss_pred CCCC-C-CCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCCCCcCCCCCCHHHHhcCc----cHHHHHHHHhhccCC
Confidence 9984 5 488999999999999999999999998 999999999999999999943 2344444454 6665
No 10
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-41 Score=304.19 Aligned_cols=268 Identities=16% Similarity=0.144 Sum_probs=221.8
Q ss_pred CCChhHHHHHhcCChHHhhhccCChhHHHhhhh-ccCCchHHHHHHHHHhcCCChHHHHHH----HhcCCccccccCCCC
Q 046373 5 SIYPNFFNAAAAGDAETFKRNTTSDEIESLLTA-QTKNTILHINIISQKRKNGSTKFIGEM----LKKCPSLLLQVNAKG 79 (364)
Q Consensus 5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~~~l~~~----l~~~~~~~~~~~~~g 79 (364)
...++||.|+..| .+++++|+..+ + ...+ ..|.||||+| +..|+.+++++|+.. +...+.+++..|..|
T Consensus 93 ~g~t~L~~Aa~~~-~~~~~~L~~~~-~--n~~d~~~g~t~Lh~A--a~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g 166 (373)
T 2fo1_E 93 ESPIKLHTEAAGS-YAITEPITRES-V--NIIDPRHNRTVLHWI--ASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDE 166 (373)
T ss_dssp -CCCHHHHHHHSS-SCCCSCCSTTT-T--TTCCCSSCCCHHHHH--HCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTS
T ss_pred CCccHHHHHhcCC-chHHHHhcccc-c--cccCCcCCCCHHHHH--HHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCC
Confidence 3467899999854 58888887654 3 3344 5899999999 999999999988742 224578889999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcC---CCCCCCCCcCCchHHH
Q 046373 80 DTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQD---PDYPYSENKYGKTSLY 156 (364)
Q Consensus 80 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~---~~~~~~~~~~~~t~l~ 156 (364)
.||||+|+..|+.++|++|+++|++ ++..+..|.||||+|+..|+.+++++|++.+ .+++ ..+..|.||||
T Consensus 167 ~TpL~~A~~~g~~~iv~~Ll~~ga~-----~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~d~~g~t~L~ 240 (373)
T 2fo1_E 167 NTPLMLAVLARRRRLVAYLMKAGAD-----PTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIE-ELDRNGMTALM 240 (373)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC-----SCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTS-CCCTTSCCHHH
T ss_pred CCHHHHHHHcChHHHHHHHHHCCCC-----CcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChh-hcCCCCCCHHH
Confidence 9999999999999999999999876 6778889999999999999999999999876 4544 67788999999
Q ss_pred HHHhcC---CHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHh
Q 046373 157 MAAEGR---YSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILF 233 (364)
Q Consensus 157 ~A~~~~---~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~ 233 (364)
+|+..+ +.+++++|++.|++++..+.. .....+..|.||||.|+..|+.+++++|++
T Consensus 241 ~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~--------------------~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~ 300 (373)
T 2fo1_E 241 IVAHNEGRDQVASAKLLVEKGAKVDYDGAA--------------------RKDSEKYKGRTALHYAAQVSNMPIVKYLVG 300 (373)
T ss_dssp HHHHSCSTTHHHHHHHHHHHTCCSSCCSGG--------------------GTSSSSCCCCCTHHHHHSSCCHHHHHHHHH
T ss_pred HHHHhCCcchHHHHHHHHHCCCCccccccc--------------------ccCcccccCCCHHHHHHHhCCHHHHHHHHH
Confidence 999887 899999999999888753320 011133478999999999999999999998
Q ss_pred cCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCCcceeehhhhcccCCc
Q 046373 234 LDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRYDAGGN 309 (364)
Q Consensus 234 ~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~~~~ 309 (364)
++...++..|..|+||||+|+..|+.+++++|+++ |++++.+|..|.||||+|+..|+ ..++.+|++++++
T Consensus 301 ~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~---gad~~~~d~~g~t~l~~A~~~g~--~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 301 EKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQ---GASVEAVDATDHTARQLAQANNH--HNIVDIFDRCRPE 371 (373)
T ss_dssp HSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT---TCCSSCCCSSSCCHHHHHHHTTC--HHHHHHHHTTC--
T ss_pred hcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCccCCCCCCCCHHHHHHHcCC--HHHHHHHHhcCcc
Confidence 87434788999999999999999999999999998 99999999999999999999999 6667777777765
No 11
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=5.1e-41 Score=297.68 Aligned_cols=296 Identities=20% Similarity=0.147 Sum_probs=236.1
Q ss_pred ChhHHHHHhcCChHHhhhccCChhHHHhhhhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHH
Q 046373 7 YPNFFNAAAAGDAETFKRNTTSDEIESLLTAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLA 86 (364)
Q Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A 86 (364)
.++|+.|++.|+.+.|++++...+.+....+..|.||||+| +..|+.+++++|++. +.+++..|..|.||||+|
T Consensus 25 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A 98 (351)
T 3utm_A 25 KDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLA--AGYNRVRIVQLLLQH----GADVHAKDKGGLVPLHNA 98 (351)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTCCCHHHHH
T ss_pred chhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCccCCCCCcHHHHH
Confidence 46899999999999999999986576777788999999999 999999999999986 888999999999999999
Q ss_pred HHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHH--------
Q 046373 87 AKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMA-------- 158 (364)
Q Consensus 87 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A-------- 158 (364)
+..|+.+++++|++++++ ++..+..|.||||+|+..|+.+++++|+++|++.. ..+..|.||+++|
T Consensus 99 ~~~g~~~iv~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~~~l~~a~~~~~~~~ 172 (351)
T 3utm_A 99 CSYGHYEVTELLLKHGAC-----VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPT-LVNCHGKSAVDMAPTPELRER 172 (351)
T ss_dssp HHTTCHHHHHHHHHTTCC-----TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHCSSHHHHHH
T ss_pred HHCCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-cccCCCCcchHHHhhhhhHHH
Confidence 999999999999999876 78889999999999999999999999999999865 6677788887664
Q ss_pred -------------HhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHh---hhhhcchhhhh-----hhccCCCchHHH
Q 046373 159 -------------AEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMH---FYFENDQTAAD-----IADKDRKMTALH 217 (364)
Q Consensus 159 -------------~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~---~~~~~~~~~~~-----~~~~~~~~t~L~ 217 (364)
+..+..+.++.++..+......+..|.||||+|+.. ...+....+.. ...+..|.||||
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~ 252 (351)
T 3utm_A 173 LTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLH 252 (351)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred HHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHH
Confidence 456667777777777666666778899999999876 21222211111 123357899999
Q ss_pred HHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCCcce
Q 046373 218 LAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRPKEF 297 (364)
Q Consensus 218 ~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~ 297 (364)
+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++ |++++.+|..|.||+|+| . .
T Consensus 253 ~A~~~g~~~~v~~Ll~~ga~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~---gad~~~~~~~g~tal~~a----~--~ 322 (351)
T 3utm_A 253 VAAERAHNDVMEVLHKHGAK-MNALDSLGQTALHRAALAGHLQTCRLLLSY---GSDPSIISLQGFTAAQMG----N--E 322 (351)
T ss_dssp HHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHS----C--H
T ss_pred HHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHc---CCCCCCcCCCCCChhhhh----h--H
Confidence 99999999999999999999 588999999999999999999999999998 999999999999999998 3 3
Q ss_pred eehhhhcccCCcccccccCCCchhHHhhhc
Q 046373 298 FKIKVRYDAGGNYGAVNKQNVSVTDVLIYG 327 (364)
Q Consensus 298 ~~~~ll~~~~~~~~~~n~~g~t~l~~a~~~ 327 (364)
....+|.+.+.. ....+.+++..|+..
T Consensus 323 ~~~~~l~~~~~~---~~~~~~~~l~~A~~~ 349 (351)
T 3utm_A 323 AVQQILSESTPM---RTSDVDYRLLEASKA 349 (351)
T ss_dssp HHHHHHHHC---------------------
T ss_pred HHHHHHHhcccc---ccCcceeehhhhhcc
Confidence 344555555543 245667777777543
No 12
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=2e-40 Score=292.40 Aligned_cols=272 Identities=19% Similarity=0.129 Sum_probs=234.5
Q ss_pred hhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCC-CCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCC
Q 046373 36 TAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNA-KGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTN 114 (364)
Q Consensus 36 ~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 114 (364)
...+|.|+||.| ++.|+.+++++|++. +++++..+. .|+||||+|+..|+.++|++|+++|+. ++..+
T Consensus 21 ~~~~~~t~L~~A--v~~g~~~~V~~LL~~----Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~-----~~~~~ 89 (337)
T 4g8k_A 21 AAVEDNHLLIKA--VQNEDVDLVQQLLEG----GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-----PVLRK 89 (337)
T ss_dssp CHHHHHHHHHHH--HHTTCHHHHHHHHHH----TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCC
T ss_pred CCCCCChHHHHH--HHcCCHHHHHHHHHC----CCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCc-----hhhhc
Confidence 344678999999 999999999999997 888888775 489999999999999999999999976 68889
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCC----------CCCC
Q 046373 115 NEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHE----------GPNG 184 (364)
Q Consensus 115 ~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~----------~~~~ 184 (364)
..+.++++.++..+..+++..++..+.+++ ..+..|.||+++|+..|+.+++++|++.|++++.. +..|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g 168 (337)
T 4g8k_A 90 KNGATPFILAAIAGSVKLLKLFLSKGADVN-ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGG 168 (337)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHTTTCCTT-CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCS
T ss_pred cCCCchhHHHHhcccchhhHHhhhccchhh-hhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCC
Confidence 999999999999999999999999999876 78889999999999999999999999999988764 4468
Q ss_pred CChHHHHHHhhhhhcchhhhhh------hccCCCchHHHHHHhcCC----HHHHHHHHhcCCcccccccCCCCcHHHHHH
Q 046373 185 KTALHAAAMHFYFENDQTAADI------ADKDRKMTALHLAAGQGH----ARTVETILFLDPKCYELVDHRGWNFLHYAM 254 (364)
Q Consensus 185 ~~~l~~a~~~~~~~~~~~~~~~------~~~~~~~t~L~~a~~~~~----~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~ 254 (364)
.||||+|+.....+....+... ..+..|.|+++.++..+. .+++++|+++|++ ++.+|..|+||||+|+
T Consensus 169 ~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad-~n~~d~~g~t~L~~a~ 247 (337)
T 4g8k_A 169 ATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD-VNVRGERGKTPLILAV 247 (337)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCC-TTCCCGGGCCHHHHHH
T ss_pred CcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCC-CCCcCCCCCCHHHHHH
Confidence 8999999998555554444321 233578899988775433 4688999999999 5889999999999999
Q ss_pred HcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCCcceeehhhhcccCCcccccccCCCchhHHhhhccc
Q 046373 255 VSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRYDAGGNYGAVNKQNVSVTDVLIYGSR 329 (364)
Q Consensus 255 ~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~~~~~~~~n~~g~t~l~~a~~~~~ 329 (364)
..++.++++.|++. .+++++.+|..|.||||+|++.|+ ..++.+|+++|++++. .+||++|+.++.
T Consensus 248 ~~~~~~~v~~Ll~~--~~~~vn~~d~~G~TpL~~A~~~g~--~~iv~~Ll~~GAd~n~-----~~~L~~A~~~~~ 313 (337)
T 4g8k_A 248 EKKHLGLVQRLLEQ--EHIEINDTDSDGKTALLLAVELKL--KKIAELLCKRGASTDC-----GDLVMTARRNYD 313 (337)
T ss_dssp HTTCHHHHHHHHTS--TTCCTTCBCTTSCBHHHHHHHTTC--HHHHHHHHTTSCSSTT-----CCHHHHHHHTTC
T ss_pred HhhhhHHHHHHHHh--cCCcccCcCCCCCCHHHHHHHcCC--HHHHHHHHHCCCCCCC-----CCHHHHHHHcCC
Confidence 99999999999985 378999999999999999999999 6677788899998754 569999976553
No 13
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=9.5e-41 Score=282.33 Aligned_cols=226 Identities=21% Similarity=0.176 Sum_probs=159.0
Q ss_pred HhhhhccCCchHHHHHHHHHh-------------cCCChHHHHHHHhcCCccc-cccCCCCCcHHHHHHHcCCHHHHHHH
Q 046373 33 SLLTAQTKNTILHINIISQKR-------------KNGSTKFIGEMLKKCPSLL-LQVNAKGDTPLHLAAKFGHSNIVSFL 98 (364)
Q Consensus 33 ~~~~~~~g~t~L~~A~~~~~~-------------~~~~~~~l~~~l~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~L 98 (364)
.+.++.+|.||||+| +..| +.+++++|++. +.++ +..|..|.||||+|+..|+.+++++|
T Consensus 3 vn~~d~~g~tpL~~A--~~~g~~~~~~~~~~~~~~~~~v~~Ll~~----g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 76 (253)
T 1yyh_A 3 VNVRGPDGFTPLMIA--SCSGGGLETGNSEEEEDAPAVISDFIYQ----GASLHNQTDRTGETALHLAARYSRSDAAKRL 76 (253)
T ss_dssp -------------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCCCCCCcHHHHH--HhccccccccchhhcCCChHHHHHHHHc----cCCcccccCCCCCcHHHHHHHcCCHHHHHHH
Confidence 345667899999999 8876 78888888775 4444 44578889999999999999999999
Q ss_pred HHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCC
Q 046373 99 IERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVS 178 (364)
Q Consensus 99 l~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~ 178 (364)
++++++ ++..+..|.||||+|+..|+.+++++|++.++......+..|.||||+|+..++.+++++|++.|++++
T Consensus 77 l~~g~~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 151 (253)
T 1yyh_A 77 LEASAD-----ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVN 151 (253)
T ss_dssp HHTTCC-----TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTT
T ss_pred HHcCCC-----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCC
Confidence 988865 677788889999999999999999999988874445777788899999999999999999999888877
Q ss_pred CCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCC
Q 046373 179 HEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFK 258 (364)
Q Consensus 179 ~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~ 258 (364)
..+. .|.||||+|+..|+.+++++|+++|++ ++..|..|+||||+|+..|+
T Consensus 152 ~~d~----------------------------~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~~~ 202 (253)
T 1yyh_A 152 AVDD----------------------------LGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREETPLFLAAREGS 202 (253)
T ss_dssp CBCT----------------------------TSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTC
T ss_pred CcCC----------------------------CCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHCCC
Confidence 5544 467777788888888999999988888 57788889999999999999
Q ss_pred HHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCCcceeehh
Q 046373 259 LHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRPKEFFKIK 301 (364)
Q Consensus 259 ~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ 301 (364)
.+++++|+++ |++++.+|..|.||||+|++.|+.++..++
T Consensus 203 ~~~v~~Ll~~---ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l 242 (253)
T 1yyh_A 203 YETAKVLLDH---FANRDITDHMDRLPRDIAQERMHHDIVRLL 242 (253)
T ss_dssp HHHHHHHHHT---TCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHc---CCCccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 9999999988 888888888899999999999984444433
No 14
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-41 Score=303.87 Aligned_cols=246 Identities=20% Similarity=0.189 Sum_probs=193.7
Q ss_pred hhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccC-CCCCcHHHHHHHcCCHHHHHHHH--------HHhhHHH
Q 046373 36 TAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVN-AKGDTPLHLAAKFGHSNIVSFLI--------ERAKLAA 106 (364)
Q Consensus 36 ~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll--------~~~~~~~ 106 (364)
.+..|.||||+| +..+ .+++++|.. ..++..| ..|.||||+|+..|+.+++++|+ +.|++
T Consensus 90 ~~~~g~t~L~~A--a~~~-~~~~~~L~~------~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~-- 158 (373)
T 2fo1_E 90 PEPESPIKLHTE--AAGS-YAITEPITR------ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD-- 158 (373)
T ss_dssp ----CCCHHHHH--HHSS-SCCCSCCST------TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCC--
T ss_pred CCCCCccHHHHH--hcCC-chHHHHhcc------ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCC--
Confidence 345778888888 7744 467666643 3456666 67888888888888887777766 44433
Q ss_pred hHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcC---CCCCCCCCC
Q 046373 107 WQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENC---TSVSHEGPN 183 (364)
Q Consensus 107 ~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~---~~~~~~~~~ 183 (364)
++..|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|++.+ ++++..+.
T Consensus 159 ---vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~- 233 (373)
T 2fo1_E 159 ---VNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPT-IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDR- 233 (373)
T ss_dssp ---TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCT-
T ss_pred ---CcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCc-ccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCC-
Confidence 67777888888888888888888888888887765 56677888888888888888888888776 55554444
Q ss_pred CCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcC---CHHHHHHHHhcCCccccc--------ccCCCCcHHHH
Q 046373 184 GKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQG---HARTVETILFLDPKCYEL--------VDHRGWNFLHY 252 (364)
Q Consensus 184 ~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~---~~~~~~~Ll~~~~~~~~~--------~d~~g~t~l~~ 252 (364)
.|.||||+|+..+ +.+++++|+++++++ +. .|..|+||||+
T Consensus 234 ---------------------------~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~-~~~~~~~~~~~d~~g~t~Lh~ 285 (373)
T 2fo1_E 234 ---------------------------NGMTALMIVAHNEGRDQVASAKLLVEKGAKV-DYDGAARKDSEKYKGRTALHY 285 (373)
T ss_dssp ---------------------------TSCCHHHHHHHSCSTTHHHHHHHHHHHTCCS-SCCSGGGTSSSSCCCCCTHHH
T ss_pred ---------------------------CCCCHHHHHHHhCCcchHHHHHHHHHCCCCc-ccccccccCcccccCCCHHHH
Confidence 5667777777776 899999999999884 43 56789999999
Q ss_pred HHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCCcceeehhhhcccCCcccccccCCCchhHHhhhccc
Q 046373 253 AMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRYDAGGNYGAVNKQNVSVTDVLIYGSR 329 (364)
Q Consensus 253 a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~~~~~~~~n~~g~t~l~~a~~~~~ 329 (364)
|+..|+.+++++|++. .+++++.+|..|.||||+|+..|+ ..++.+|+++|++++.+|..|+|||++|+..+.
T Consensus 286 A~~~g~~~~v~~Ll~~--~~~~~n~~d~~g~TpL~~A~~~g~--~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~ 358 (373)
T 2fo1_E 286 AAQVSNMPIVKYLVGE--KGSNKDKQDEDGKTPIMLAAQEGR--IEVVMYLIQQGASVEAVDATDHTARQLAQANNH 358 (373)
T ss_dssp HHSSCCHHHHHHHHHH--SCCCTTCCCTTCCCHHHHHHHHTC--HHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTC
T ss_pred HHHhCCHHHHHHHHHh--cCCCccCcCCCCCCHHHHHHHcCC--HHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCC
Confidence 9999999999999986 248999999999999999999999 677778889999999999999999999976554
No 15
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.7e-41 Score=302.39 Aligned_cols=252 Identities=16% Similarity=0.119 Sum_probs=209.1
Q ss_pred HHHhhhhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhh
Q 046373 31 IESLLTAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMM 110 (364)
Q Consensus 31 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 110 (364)
++....|.+|.||||+| +..|+.+++++|++. +.+++..|..|.||||+|+..|+.++|++|+++++.
T Consensus 11 ~~~~~~d~~g~t~L~~A--a~~g~~~~v~~Ll~~----g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------ 78 (364)
T 3ljn_A 11 LNRIKSDDENMEKIHVA--ARKGQTDEVRRLIET----GVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEV------ 78 (364)
T ss_dssp -----CCHHHHHHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCC------
T ss_pred CCccccCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCC------
Confidence 33445667899999999 999999999999986 788899999999999999999999999999999863
Q ss_pred hcCCCCCCcHHHHHHHcCCHHHHHHHHhc----CCCCCC----------------CCCcCCchHHHHHHhcC--CHHHHH
Q 046373 111 RMTNNEKNTALHEAVCHGNVQVVKILTKQ----DPDYPY----------------SENKYGKTSLYMAAEGR--YSEMVI 168 (364)
Q Consensus 111 ~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~----~~~~~~----------------~~~~~~~t~l~~A~~~~--~~~~v~ 168 (364)
..+..|.||||+|+..|+.+++++|++. +.+... ..+..|.||||+|+..| +.++++
T Consensus 79 -~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~ 157 (364)
T 3ljn_A 79 -HSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIK 157 (364)
T ss_dssp -CCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHH
T ss_pred -ccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHH
Confidence 3345799999999999999999999998 555331 16667999999999999 999999
Q ss_pred HHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcc----cccccC
Q 046373 169 ELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKC----YELVDH 244 (364)
Q Consensus 169 ~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~----~~~~d~ 244 (364)
+|++.|++++..+. .|.||||+|+..|+.+++++|++++++. ++..|.
T Consensus 158 ~Ll~~ga~~~~~d~----------------------------~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~ 209 (364)
T 3ljn_A 158 ILVQLGASPTAKDK----------------------------ADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANK 209 (364)
T ss_dssp HHHHHTCCTTCCCT----------------------------TSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCT
T ss_pred HHHHcCCCCcccCC----------------------------CCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCC
Confidence 99999999876655 4677778888889999999999988773 477888
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCCcceeehhhhcccCCcccc------------
Q 046373 245 RGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRYDAGGNYGA------------ 312 (364)
Q Consensus 245 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~~~~~~~------------ 312 (364)
.|+||||+|+..|+.+++++|+++ |++++.+|..|.||||+|++.|+ ..++.+|+++|++++.
T Consensus 210 ~g~t~L~~A~~~g~~~~v~~Ll~~---gad~~~~d~~g~tpL~~A~~~g~--~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 284 (364)
T 3ljn_A 210 QGNSHLHWAILINWEDVAMRFVEM---GIDVNMEDNEHTVPLYLSVRAAM--VLLTKELLQKTDVFLIQACPYHNGTTVL 284 (364)
T ss_dssp TCCCTTHHHHTTTCHHHHHHHHTT---TCCTTCCCTTSCCHHHHHHHTCC--HHHHHHHHHHSCHHHHHTCTTBSSSSBC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHc---CCCCCCCCCCCCCHHHHHHHhCh--HHHHHHHHHcCCchhhhcCcccCccccc
Confidence 999999999999999999999998 89999999999999999999999 6666666677766433
Q ss_pred cccCCCchhHHhhhcc
Q 046373 313 VNKQNVSVTDVLIYGS 328 (364)
Q Consensus 313 ~n~~g~t~l~~a~~~~ 328 (364)
.+..|++|++.|+...
T Consensus 285 ~~~~~~~~l~~aa~~~ 300 (364)
T 3ljn_A 285 PDRVVWLDFVPAAADP 300 (364)
T ss_dssp GGGCCCCTTSCSSCCH
T ss_pred ccccccccchhhhhcc
Confidence 5667888888885444
No 16
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2.6e-41 Score=287.10 Aligned_cols=249 Identities=17% Similarity=0.165 Sum_probs=219.1
Q ss_pred CCChhHHHHHhcCChHHhhhccCChhHHHhhhhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHH
Q 046373 5 SIYPNFFNAAAAGDAETFKRNTTSDEIESLLTAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLH 84 (364)
Q Consensus 5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~ 84 (364)
+.+++||.|+..|+.++|++|++.+ .+....+..|.||||+| +..|+.+++++|++. +.+++..|..|.||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~ 74 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQG-WAVNIITADHVSPLHEA--CLGGHLSCVKILLKH----GAQVNGVTADWHTPLF 74 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTT-CCSSCCCTTCCCHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTSCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHH--HHcCCHHHHHHHHHC----CCCCCCCCCCCCCHHH
Confidence 4578999999999999999999997 66777888999999999 999999999999986 7889999999999999
Q ss_pred HHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCH
Q 046373 85 LAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYS 164 (364)
Q Consensus 85 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~ 164 (364)
+|+..|+.+++++|++++++ ++ .+..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.
T Consensus 75 ~A~~~~~~~~v~~Ll~~g~~-----~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~ 147 (261)
T 2xai_A 75 NACVSGSWDCVNLLLQHGAS-----VQ-PESDLASPIHEAARRGHVECVNSLIAYGGNID-HKISHLGTPLYLACENQQR 147 (261)
T ss_dssp HHHHHTCHHHHHHHHHTTCC-----SS-CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCBTTTBCHHHHHHHTTCH
T ss_pred HHHHcCCHHHHHHHHHCCCC-----CC-CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-cCCCCCCCHHHHHHHhCCH
Confidence 99999999999999999975 33 35569999999999999999999999999976 6788899999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcccccccC
Q 046373 165 EMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKCYELVDH 244 (364)
Q Consensus 165 ~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~ 244 (364)
+++++|++.|++++. + ..|.||||.|+..|+.+++++|+++|++ ++.+|.
T Consensus 148 ~~v~~Ll~~g~~~~~-~----------------------------~~g~t~Lh~A~~~~~~~~v~~Ll~~gad-~~~~d~ 197 (261)
T 2xai_A 148 ACVKKLLESGADVNQ-G----------------------------KGQDSPLHAVARTASEELACLLMDFGAD-TQAKNA 197 (261)
T ss_dssp HHHHHHHHHTCCTTC-C----------------------------BTTBCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCT
T ss_pred HHHHHHHHcCCCCCC-C----------------------------CCCCChHHHHHHcCCHHHHHHHHHcCCC-CCCcCC
Confidence 999999999998762 2 2578999999999999999999999999 588999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCccc-----ccccccCCCCCCcHHHHHHhcCCcceee
Q 046373 245 RGWNFLHYAMVSFKLHELKILLKNPLA-----RSLIYEGDNNGNTPLHVLAAIRPKEFFK 299 (364)
Q Consensus 245 ~g~t~l~~a~~~~~~~~~~~ll~~~~~-----~~~i~~~d~~g~t~L~~A~~~~~~~~~~ 299 (364)
.|+||+|+|+..+. +++.|+++... .+.++.+|..|.||+|.|.+...++...
T Consensus 198 ~g~tpl~~A~~~~~--~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~~p~~l~ 255 (261)
T 2xai_A 198 EGKRPVELVPPESP--LAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLK 255 (261)
T ss_dssp TSCCGGGGSCTTCT--HHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSSSCHHHH
T ss_pred CCCChhhhcccccc--HHHHHHhccCCccHHHHHHHHHHHHhchhccccCcccCCcHHHH
Confidence 99999999997665 77888886332 3567888999999999999887754433
No 17
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.5e-40 Score=279.19 Aligned_cols=230 Identities=20% Similarity=0.150 Sum_probs=170.0
Q ss_pred hhhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCC
Q 046373 35 LTAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTN 114 (364)
Q Consensus 35 ~~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 114 (364)
..|.+|.||||+| ++.|+.+++++|++.+...+.+++..|..|.||||+|+..|+.+++++|++.+++ ++..+
T Consensus 4 ~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~ 76 (241)
T 1k1a_A 4 RADEDGDTPLHIA--VVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS-----PMALD 76 (241)
T ss_dssp ---CTTCCHHHHH--HHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCC
T ss_pred ccCCCCCcHHHHH--HHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCC-----ccccC
Confidence 3456788888888 8888888888887766666777777788888888888888888888888887765 56667
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCC----CCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHH
Q 046373 115 NEKNTALHEAVCHGNVQVVKILTKQDP----DYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHA 190 (364)
Q Consensus 115 ~~g~t~l~~a~~~~~~e~v~~Ll~~~~----~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~ 190 (364)
..|.||||+|+..|+.+++++|++.++ ++. ..+..|.||||+|+..++.+++++|++.|++++..+.
T Consensus 77 ~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-------- 147 (241)
T 1k1a_A 77 RHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLE-ARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDI-------- 147 (241)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT--------
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccc-ccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccc--------
Confidence 778888888888888888888888776 333 5566778888888888888888888888777654331
Q ss_pred HHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcc
Q 046373 191 AAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPL 270 (364)
Q Consensus 191 a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~ 270 (364)
..|.||||.|+..|+.+++++|+++|++ ++..|..|+||||+|+..++.+++++|+++
T Consensus 148 -------------------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-- 205 (241)
T 1k1a_A 148 -------------------KSGRSPLIHAVENNSLSMVQLLLQHGAN-VNAQMYSGSSALHSASGRGLLPLVRTLVRS-- 205 (241)
T ss_dssp -------------------TTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHT--
T ss_pred -------------------cCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhc--
Confidence 2466777777777888888888888777 466777788888888888888888888876
Q ss_pred cccccccCCCCCCcHHHHHHhcCCcceeehhhhcc
Q 046373 271 ARSLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRYD 305 (364)
Q Consensus 271 ~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~ 305 (364)
|++++.+|..|.||||+|+..++ ...+..|.+
T Consensus 206 -ga~~~~~~~~g~tpl~~A~~~~~--~~i~~~l~~ 237 (241)
T 1k1a_A 206 -GADSSLKNCHNDTPLMVARSRRV--IDILRGKAT 237 (241)
T ss_dssp -TCCTTCCCTTSCCTTTTCSSHHH--HHHHTC---
T ss_pred -CCCCCCcCCCCCCHHHHHHhcCc--HHHHhhhcc
Confidence 77788788888888888887777 444444433
No 18
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=4.1e-40 Score=283.00 Aligned_cols=248 Identities=21% Similarity=0.139 Sum_probs=178.0
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCC
Q 046373 72 LLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYG 151 (364)
Q Consensus 72 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~ 151 (364)
++..|..|.||||+|+..|+.++|++|++.++.. ..++..+..|.||||+|+..|+.+++++|+++|++++ ..+..|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g 78 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGH--EYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVL-VAERGG 78 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTS--GGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS-CCCTTS
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc--ccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCC
Confidence 3567788888888888888888888888887642 1256677888888888888888888888888888865 667778
Q ss_pred chHHHHHHhcCCHHHHHHHHHcCCCCCCCC-------------CCCCChHHHHHHhhhhh------cchhhhhhhccCCC
Q 046373 152 KTSLYMAAEGRYSEMVIELLENCTSVSHEG-------------PNGKTALHAAAMHFYFE------NDQTAADIADKDRK 212 (364)
Q Consensus 152 ~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~-------------~~~~~~l~~a~~~~~~~------~~~~~~~~~~~~~~ 212 (364)
.||||+|+..|+.+++++|++.|++..... ..+.++++.+....... .............|
T Consensus 79 ~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 158 (282)
T 1oy3_D 79 HTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDG 158 (282)
T ss_dssp CCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTS
T ss_pred CCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCC
Confidence 888888888888888888888876543221 22334444433321000 00011112234579
Q ss_pred chHHHHHHhcCCHHHHHHHHhcCCcccccccC-CCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHh
Q 046373 213 MTALHLAAGQGHARTVETILFLDPKCYELVDH-RGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAA 291 (364)
Q Consensus 213 ~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~-~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~ 291 (364)
.||||.|+..|+.+++++|+++|+++ +..+. .|+||||+|+..|+.+++++|+++ |++++.+|..|.||||+|+.
T Consensus 159 ~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~---gad~~~~d~~g~tpL~~A~~ 234 (282)
T 1oy3_D 159 HTPLHVAVIHKDAEMVRLLRDAGADL-NKPEPTCGRTPLHLAVEAQAASVLELLLKA---GADPTARMYGGRTPLGSALL 234 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHT
T ss_pred cCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCcCHHHHHHHcCCHHHHHHHHHc---CCCCcccccCCCCHHHHHHH
Confidence 99999999999999999999999994 66664 599999999999999999999998 99999999999999999999
Q ss_pred cCCcceeehhhhcccCCcccccccCCCchhHHhhhcc
Q 046373 292 IRPKEFFKIKVRYDAGGNYGAVNKQNVSVTDVLIYGS 328 (364)
Q Consensus 292 ~~~~~~~~~~ll~~~~~~~~~~n~~g~t~l~~a~~~~ 328 (364)
.++ ..++.+|+++|++++.+|..|.||+++|....
T Consensus 235 ~~~--~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 235 RPN--PILARLLRAHGAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp SSC--HHHHHHHHHTTCCCCCCC--------------
T ss_pred cCC--cHHHHHHHHcCCCcCcCCCcccccccccCCcc
Confidence 999 77778888999999999999999999996544
No 19
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.9e-40 Score=279.37 Aligned_cols=221 Identities=22% Similarity=0.187 Sum_probs=167.0
Q ss_pred cccccCCCCCcHHHHHHHcC-------------CHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHH
Q 046373 71 LLLQVNAKGDTPLHLAAKFG-------------HSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILT 137 (364)
Q Consensus 71 ~~~~~~~~g~t~L~~A~~~~-------------~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll 137 (364)
+++.+|.+|+||||+|+..| +.+++++|++.++.. ....+..|.||||+|+..|+.+++++|+
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~----~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 77 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASL----HNQTDRTGETALHLAARYSRSDAAKRLL 77 (253)
T ss_dssp ------------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCc----ccccCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 46778999999999999987 899999999999763 3456889999999999999999999999
Q ss_pred hcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCC-CCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHH
Q 046373 138 KQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCT-SVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTAL 216 (364)
Q Consensus 138 ~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L 216 (364)
++|++++ ..+..|.||||+|+..|+.+++++|++.+. +++..+. .|.|||
T Consensus 78 ~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~----------------------------~g~t~L 128 (253)
T 1yyh_A 78 EASADAN-IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMH----------------------------DGTTPL 128 (253)
T ss_dssp HTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCT----------------------------TCCCHH
T ss_pred HcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCC----------------------------CCCcHH
Confidence 9999976 678889999999999999999999999986 6655444 577788
Q ss_pred HHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCCcc
Q 046373 217 HLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRPKE 296 (364)
Q Consensus 217 ~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~ 296 (364)
|.|+..|+.+++++|++++++ ++..|..|+||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+
T Consensus 129 ~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~tpL~~A~~~~~-- 202 (253)
T 1yyh_A 129 ILAARLAVEGMLEDLINSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLKN---GANKDMQNNREETPLFLAAREGS-- 202 (253)
T ss_dssp HHHHHHTCSSHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHHTC--
T ss_pred HHHHHcChHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCCCHHHHHHHCCC--
Confidence 888888999999999999998 588999999999999999999999999998 99999999999999999999999
Q ss_pred eeehhhhcccCCcccccccCCCchhHHhhhcccc
Q 046373 297 FFKIKVRYDAGGNYGAVNKQNVSVTDVLIYGSRE 330 (364)
Q Consensus 297 ~~~~~ll~~~~~~~~~~n~~g~t~l~~a~~~~~~ 330 (364)
..++.+|+++|++++.+|..|+||+++|+..+..
T Consensus 203 ~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~ 236 (253)
T 1yyh_A 203 YETAKVLLDHFANRDITDHMDRLPRDIAQERMHH 236 (253)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred HHHHHHHHHcCCCccccccCCCCHHHHHHHcCCH
Confidence 6777888899999999999999999999655544
No 20
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.9e-39 Score=271.78 Aligned_cols=220 Identities=22% Similarity=0.241 Sum_probs=179.8
Q ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcC
Q 046373 71 LLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKY 150 (364)
Q Consensus 71 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~ 150 (364)
+++..|..|.||||+|+..|+.+++++|++++.+ ++..+..|.||||+|+..|+.+++++|+++|.++. ..+..
T Consensus 3 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~ 76 (237)
T 3b7b_A 3 NFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGAN-----IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVD-PKDAE 76 (237)
T ss_dssp CCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCC-CCCTT
T ss_pred CcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCC-----cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC-CCCCC
Confidence 4566778888888888888888888888888765 67777888888888888888888888888888765 56777
Q ss_pred CchHHHHHHhcCCHHHHHHHHHcC-CCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHH
Q 046373 151 GKTSLYMAAEGRYSEMVIELLENC-TSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVE 229 (364)
Q Consensus 151 ~~t~l~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~ 229 (364)
|.||||+|+..|+.+++++|++.| .+++..+. .|.||||.|+..|+.++++
T Consensus 77 g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~----------------------------~g~t~L~~A~~~~~~~~~~ 128 (237)
T 3b7b_A 77 GSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDD----------------------------GGWTPMIWATEYKHVDLVK 128 (237)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCT----------------------------TSCCHHHHHHHTTCHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCC----------------------------CCCCHHHHHHHcCCHHHHH
Confidence 888888888888888888888887 56554433 4667777788888888888
Q ss_pred HHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCCcceeehhhhcccCCc
Q 046373 230 TILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRYDAGGN 309 (364)
Q Consensus 230 ~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~~~~ 309 (364)
+|+++|++ ++..+..|.||||+|+..|+.+++++|++. +++++.+|..|.||||+|++.++ ...+.+|+++|++
T Consensus 129 ~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~gad 202 (237)
T 3b7b_A 129 LLLSKGSD-INIRDNEENICLHWAAFSGCVDIAEILLAA---KCDLHAVNIHGDSPLHIAARENR--YDCVVLFLSRDSD 202 (237)
T ss_dssp HHHHTTCC-TTCCCTTSCCHHHHHHHHCCHHHHHHHHTT---TCCTTCCCTTCCCHHHHHHHTTC--HHHHHHHHTTTCC
T ss_pred HHHHCCCC-CCccCCCCCCHHHHHHHCCCHHHHHHHHHc---CCCCCCcCCCCCCHHHHHHHhCC--HhHHHHHHHcCCC
Confidence 88888887 477788888888888888888888888887 78888888888888888888888 6666777788888
Q ss_pred ccccccCCCchhHHhhhcccc
Q 046373 310 YGAVNKQNVSVTDVLIYGSRE 330 (364)
Q Consensus 310 ~~~~n~~g~t~l~~a~~~~~~ 330 (364)
++.+|..|+||+|+|+..+..
T Consensus 203 ~~~~d~~g~t~l~~A~~~~~~ 223 (237)
T 3b7b_A 203 VTLKNKEGETPLQCASLNSQV 223 (237)
T ss_dssp TTCCCTTSCCHHHHSCTTCHH
T ss_pred CCccCCCCCCHHHHHHHHHHH
Confidence 888888888888888665543
No 21
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.5e-39 Score=272.29 Aligned_cols=217 Identities=22% Similarity=0.235 Sum_probs=199.1
Q ss_pred hhhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCC
Q 046373 35 LTAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTN 114 (364)
Q Consensus 35 ~~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 114 (364)
..+.+|.||||+| +..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.++. ++..+
T Consensus 6 ~~~~~g~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~ 74 (237)
T 3b7b_A 6 MEHQNKRSPLHAA--AEAGHVDICHMLVQA----GANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL-----VDPKD 74 (237)
T ss_dssp CSSCCSCCHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-----CCCCC
T ss_pred cccCCCCCHHHHH--HHcCcHHHHHHHHHc----CCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC-----CCCCC
Confidence 4567999999999 999999999999986 788899999999999999999999999999999865 67788
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHh
Q 046373 115 NEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMH 194 (364)
Q Consensus 115 ~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~ 194 (364)
..|.||||+|+..|+.+++++|++.++......+..|.||||+|+..++.+++++|++.|++++.++.
T Consensus 75 ~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~------------ 142 (237)
T 3b7b_A 75 AEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDN------------ 142 (237)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT------------
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCC------------
Confidence 99999999999999999999999998544557788899999999999999999999999999876654
Q ss_pred hhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccc
Q 046373 195 FYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSL 274 (364)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~ 274 (364)
.|.||||.|+..|+.+++++|++++++ ++..|..|.||||+|+..++.+++++|+++ |++
T Consensus 143 ----------------~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---gad 202 (237)
T 3b7b_A 143 ----------------EENICLHWAAFSGCVDIAEILLAAKCD-LHAVNIHGDSPLHIAARENRYDCVVLFLSR---DSD 202 (237)
T ss_dssp ----------------TSCCHHHHHHHHCCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTT---TCC
T ss_pred ----------------CCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhCCHhHHHHHHHc---CCC
Confidence 567788888888999999999999998 578899999999999999999999999998 999
Q ss_pred cccCCCCCCcHHHHHHhcCC
Q 046373 275 IYEGDNNGNTPLHVLAAIRP 294 (364)
Q Consensus 275 i~~~d~~g~t~L~~A~~~~~ 294 (364)
++.+|..|.||||+|+..++
T Consensus 203 ~~~~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 203 VTLKNKEGETPLQCASLNSQ 222 (237)
T ss_dssp TTCCCTTSCCHHHHSCTTCH
T ss_pred CCccCCCCCCHHHHHHHHHH
Confidence 99999999999999999998
No 22
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=3.8e-39 Score=270.54 Aligned_cols=223 Identities=22% Similarity=0.239 Sum_probs=192.4
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCC
Q 046373 72 LLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYG 151 (364)
Q Consensus 72 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~ 151 (364)
++..|.+|.||||+|+..|+.+++++|++.... ....++..+..|.||||+|+..|+.+++++|++.|+++. ..+..|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g 79 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQ-GGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPM-ALDRHG 79 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTS
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHh-cCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCC
Confidence 356789999999999999999999999984211 012377888999999999999999999999999999866 678889
Q ss_pred chHHHHHHhcCCHHHHHHHHHcCC----CCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHH
Q 046373 152 KTSLYMAAEGRYSEMVIELLENCT----SVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHART 227 (364)
Q Consensus 152 ~t~l~~A~~~~~~~~v~~Ll~~~~----~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~ 227 (364)
.||||+|+..++.+++++|++.+. +++..+ ..|.||||.|+..|+.++
T Consensus 80 ~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~----------------------------~~g~t~L~~A~~~~~~~~ 131 (241)
T 1k1a_A 80 QTAAHLACEHRSPTCLRALLDSAAPGTLDLEARN----------------------------YDGLTALHVAVNTECQET 131 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCC----------------------------TTSCCHHHHHHHHTCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCccccccccC----------------------------cCCCcHHHHHHHcCCHHH
Confidence 999999999999999999999987 443333 367888899999999999
Q ss_pred HHHHHhcCCccccccc-CCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCCcceeehhhhccc
Q 046373 228 VETILFLDPKCYELVD-HRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRYDA 306 (364)
Q Consensus 228 ~~~Ll~~~~~~~~~~d-~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~ 306 (364)
+++|++++.++ +..+ ..|.||||+|+..++.+++++|++. |++++.+|..|.||||+|+..++ ...+.+|+++
T Consensus 132 ~~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~ 205 (241)
T 1k1a_A 132 VQLLLERGADI-DAVDIKSGRSPLIHAVENNSLSMVQLLLQH---GANVNAQMYSGSSALHSASGRGL--LPLVRTLVRS 205 (241)
T ss_dssp HHHHHHTTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCBCTTSCBHHHHHHHHTC--HHHHHHHHHT
T ss_pred HHHHHHcCCCc-ccccccCCCcHHHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCCCHHHHHHHcCC--HHHHHHHHhc
Confidence 99999999984 6666 7899999999999999999999998 89999999999999999999999 6677788899
Q ss_pred CCcccccccCCCchhHHhhhcccc
Q 046373 307 GGNYGAVNKQNVSVTDVLIYGSRE 330 (364)
Q Consensus 307 ~~~~~~~n~~g~t~l~~a~~~~~~ 330 (364)
|++++.+|..|+||+|+|+..+..
T Consensus 206 ga~~~~~~~~g~tpl~~A~~~~~~ 229 (241)
T 1k1a_A 206 GADSSLKNCHNDTPLMVARSRRVI 229 (241)
T ss_dssp TCCTTCCCTTSCCTTTTCSSHHHH
T ss_pred CCCCCCcCCCCCCHHHHHHhcCcH
Confidence 999999999999999999655443
No 23
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.1e-40 Score=297.23 Aligned_cols=258 Identities=19% Similarity=0.161 Sum_probs=218.3
Q ss_pred ChhHHHHHhcCChHHhhhccCChhHHHhhhhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHH
Q 046373 7 YPNFFNAAAAGDAETFKRNTTSDEIESLLTAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLA 86 (364)
Q Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A 86 (364)
.++||.|+..|++++|++|++.+ .+....+..|.||||+| +..|+.+++++|++. +. +..+.+|.||||+|
T Consensus 21 ~t~L~~Aa~~g~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~----g~--~~~~~~g~t~L~~A 91 (364)
T 3ljn_A 21 MEKIHVAARKGQTDEVRRLIETG-VSPTIQNRFGCTALHLA--CKFGCVDTAKYLASV----GE--VHSLWHGQKPIHLA 91 (364)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHH--HHHCCHHHHHHHHHH----CC--CCCCBTTBCHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCcHHHHH--HHcCCHHHHHHHHHC----CC--CccccCCCCHHHHH
Confidence 57999999999999999999997 77778888999999999 999999999999996 44 33345799999999
Q ss_pred HHcCCHHHHHHHHHHhhHHHhHhhhc-----------------CCCCCCcHHHHHHHcC--CHHHHHHHHhcCCCCCCCC
Q 046373 87 AKFGHSNIVSFLIERAKLAAWQMMRM-----------------TNNEKNTALHEAVCHG--NVQVVKILTKQDPDYPYSE 147 (364)
Q Consensus 87 ~~~~~~~~v~~Ll~~~~~~~~~~~~~-----------------~~~~g~t~l~~a~~~~--~~e~v~~Ll~~~~~~~~~~ 147 (364)
+..|+.+++++|++.+... ...++. .+..|.||||+|+..| +.+++++|++.|++++ ..
T Consensus 92 ~~~g~~~~v~~Ll~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~-~~ 169 (364)
T 3ljn_A 92 VMANKTDLVVALVEGAKER-GQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPT-AK 169 (364)
T ss_dssp HHTTCHHHHHHHHHHHHHH-TCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTT-CC
T ss_pred HHcCCHHHHHHHHHhcccc-CCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCc-cc
Confidence 9999999999999994321 011222 7788999999999999 9999999999999976 77
Q ss_pred CcCCchHHHHHHhcCCHHHHHHHHHcCCC-----CCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhc
Q 046373 148 NKYGKTSLYMAAEGRYSEMVIELLENCTS-----VSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQ 222 (364)
Q Consensus 148 ~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~-----~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~ 222 (364)
+..|.||||+|+..|+.+++++|++.|++ ++..+. .|.||||+|+..
T Consensus 170 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~----------------------------~g~t~L~~A~~~ 221 (364)
T 3ljn_A 170 DKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANK----------------------------QGNSHLHWAILI 221 (364)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCT----------------------------TCCCTTHHHHTT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCC----------------------------CCCcHHHHHHHc
Confidence 88899999999999999999999999988 554443 577888888999
Q ss_pred CCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCccccccccc------------CCCCCCcHHHHHH
Q 046373 223 GHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYE------------GDNNGNTPLHVLA 290 (364)
Q Consensus 223 ~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~------------~d~~g~t~L~~A~ 290 (364)
|+.+++++|+++|++ ++..|..|+||||+|+..|+.+++++|+++ +++++. .+..++||++.|+
T Consensus 222 g~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa 297 (364)
T 3ljn_A 222 NWEDVAMRFVEMGID-VNMEDNEHTVPLYLSVRAAMVLLTKELLQK---TDVFLIQACPYHNGTTVLPDRVVWLDFVPAA 297 (364)
T ss_dssp TCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTCCHHHHHHHHHH---SCHHHHHTCTTBSSSSBCGGGCCCCTTSCSS
T ss_pred CCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHhChHHHHHHHHHc---CCchhhhcCcccCcccccccccccccchhhh
Confidence 999999999999999 588999999999999999999999999997 433322 4567899999999
Q ss_pred hcCCcceeehhhhcccCCc
Q 046373 291 AIRPKEFFKIKVRYDAGGN 309 (364)
Q Consensus 291 ~~~~~~~~~~~ll~~~~~~ 309 (364)
..++ ...+..|+..+++
T Consensus 298 ~~~~--~~~v~~ll~~~~~ 314 (364)
T 3ljn_A 298 ADPS--KQEVLQLLQEKLD 314 (364)
T ss_dssp CCHH--HHHHHHHHHHHHH
T ss_pred hccC--HHHHHHHHHHHHH
Confidence 9987 3344444445554
No 24
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2.4e-39 Score=270.05 Aligned_cols=225 Identities=24% Similarity=0.272 Sum_probs=144.7
Q ss_pred cCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCC
Q 046373 39 TKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKN 118 (364)
Q Consensus 39 ~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~ 118 (364)
.+.+|||.| ++.|+.+.++++++. .+...+..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.
T Consensus 5 ~~~~~l~~A--~~~g~~~~v~~ll~~---~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~ 74 (231)
T 3aji_A 5 VSNIMICNL--AYSGKLDELKERILA---DKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP-----VNDKDDAGW 74 (231)
T ss_dssp CSSSHHHHH--HHHTCHHHHHHHHHH---CGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----SCCCCTTSC
T ss_pred cccchHHHH--HHhCCHHHHHHHHHh---chhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCC-----CCCcCCCCC
Confidence 456666666 666666666666652 3344555666667777777777777777777766644 455666667
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhh
Q 046373 119 TALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFE 198 (364)
Q Consensus 119 t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~ 198 (364)
||||+|+..|+.+++++|+++++++. ..+..|.||||+|+..++.+++++|++.|++++..+.
T Consensus 75 t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~---------------- 137 (231)
T 3aji_A 75 SPLHIAASAGXDEIVKALLVKGAHVN-AVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDH---------------- 137 (231)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT----------------
T ss_pred CHHHHHHHcCHHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC----------------
Confidence 77777777777777777776666654 4555666777777777777777777776666654433
Q ss_pred cchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccC
Q 046373 199 NDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEG 278 (364)
Q Consensus 199 ~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~ 278 (364)
.+.||||.|+..|+.+++++|++++++ ++.+|..|+||||+|+..++.+++++|+++ |++++.+
T Consensus 138 ------------~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~ 201 (231)
T 3aji_A 138 ------------YDATAMHRAAAKGNLKMVHILLFYKAS-TNIQDTEGNTPLHLACDEERVEEAKFLVTQ---GASIYIE 201 (231)
T ss_dssp ------------TSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCSCCC
T ss_pred ------------CCCcHHHHHHHcCCHHHHHHHHhcCCC-ccccCCCCCCHHHHHHHCCCHHHHHHHHHC---CCCCCCC
Confidence 345555666666666777777766666 355666677777777777777777777766 6666666
Q ss_pred CCCCCcHHHHHHhcCCcceeehhhhcccCC
Q 046373 279 DNNGNTPLHVLAAIRPKEFFKIKVRYDAGG 308 (364)
Q Consensus 279 d~~g~t~L~~A~~~~~~~~~~~~ll~~~~~ 308 (364)
|..|.||||+|+..++ .....+|.+.|+
T Consensus 202 ~~~g~t~l~~A~~~~~--~~i~~lL~~~~a 229 (231)
T 3aji_A 202 NKEEKTPLQVAKGGLG--LILKRLAEGEEA 229 (231)
T ss_dssp CTTSCCHHHHSCHHHH--HHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHhhHH--HHHHHHHccccc
Confidence 6677777777766666 444444444443
No 25
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2.4e-39 Score=270.05 Aligned_cols=213 Identities=23% Similarity=0.198 Sum_probs=145.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHH
Q 046373 78 KGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYM 157 (364)
Q Consensus 78 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~ 157 (364)
.+.+|||.|+..|+.+++++|++.+... .+..+..|.||||+|+..|+.+++++|++.+.+++ ..+..|.||||+
T Consensus 5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~----~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~ 79 (231)
T 3aji_A 5 VSNIMICNLAYSGKLDELKERILADKSL----ATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVN-DKDDAGWSPLHI 79 (231)
T ss_dssp CSSSHHHHHHHHTCHHHHHHHHHHCGGG----GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTSCCHHHH
T ss_pred cccchHHHHHHhCCHHHHHHHHHhchhh----hhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCC-CcCCCCCCHHHH
Confidence 4567777777777777777777665432 45566677777777777777777777777776654 556667777777
Q ss_pred HHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCc
Q 046373 158 AAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPK 237 (364)
Q Consensus 158 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~ 237 (364)
|+..|+.+++++|++.|++++..+. .|.||||.|+..|+.+++++|++++.+
T Consensus 80 A~~~~~~~~v~~Ll~~g~~~~~~~~----------------------------~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 131 (231)
T 3aji_A 80 AASAGXDEIVKALLVKGAHVNAVNQ----------------------------NGCTPLHYAASKNRHEIAVMLLEGGAN 131 (231)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCT----------------------------TSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHcCHHHHHHHHHHcCCCCCCCCC----------------------------CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 7777777777777777776654443 355566666666777777777777766
Q ss_pred ccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCCcceeehhhhcccCCcccccccCC
Q 046373 238 CYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRYDAGGNYGAVNKQN 317 (364)
Q Consensus 238 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~~~~~~~~n~~g 317 (364)
++..+..|.||||+|+..|+.+++++|++. +++++.+|..|.||||+|+..++ ...+.+|+++|++++.+|..|
T Consensus 132 -~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~ga~~~~~~~~g 205 (231)
T 3aji_A 132 -PDAKDHYDATAMHRAAAKGNLKMVHILLFY---KASTNIQDTEGNTPLHLACDEER--VEEAKFLVTQGASIYIENKEE 205 (231)
T ss_dssp -TTCCCTTSCCHHHHHHHHTCHHHHHHHHHT---TCCSCCCCTTSCCHHHHHHHTTC--HHHHHHHHHTTCCSCCCCTTS
T ss_pred -CCCcCCCCCcHHHHHHHcCCHHHHHHHHhc---CCCccccCCCCCCHHHHHHHCCC--HHHHHHHHHCCCCCCCCCCCC
Confidence 355666777777777777777777777776 66777777777777777777777 555566666777777777777
Q ss_pred CchhHHhhhccc
Q 046373 318 VSVTDVLIYGSR 329 (364)
Q Consensus 318 ~t~l~~a~~~~~ 329 (364)
+||+++|..++.
T Consensus 206 ~t~l~~A~~~~~ 217 (231)
T 3aji_A 206 KTPLQVAKGGLG 217 (231)
T ss_dssp CCHHHHSCHHHH
T ss_pred CCHHHHHHhhHH
Confidence 777777754443
No 26
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.9e-38 Score=263.98 Aligned_cols=210 Identities=19% Similarity=0.148 Sum_probs=171.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcC--CCCCCCCCcCCchHHH
Q 046373 79 GDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQD--PDYPYSENKYGKTSLY 156 (364)
Q Consensus 79 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~--~~~~~~~~~~~~t~l~ 156 (364)
|.||||+|+..|+.+++++|++.++.. ....+..|.||||+|+..|+.+++++|++++ +++....+..|.||||
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~ 77 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSL----LLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFH 77 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGG----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccc----cccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHH
Confidence 678999999999999999998888653 4457888899999999999999999999888 4444336678889999
Q ss_pred HHHhcCCHHHHHHHHHcC--CCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhc
Q 046373 157 MAAEGRYSEMVIELLENC--TSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFL 234 (364)
Q Consensus 157 ~A~~~~~~~~v~~Ll~~~--~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~ 234 (364)
+|+..|+.+++++|++.| ++++..+. .|.||||.|+..|+.+++++|+++
T Consensus 78 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~----------------------------~g~t~L~~A~~~~~~~~~~~Ll~~ 129 (228)
T 2dzn_A 78 IACSVGNLEVVKSLYDRPLKPDLNKITN----------------------------QGVTCLHLAVGKKWFEVSQFLIEN 129 (228)
T ss_dssp HHHHHCCHHHHHHHHSSSSCCCTTCCCT----------------------------TCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHhCCCCcccccCCc----------------------------CCCCHHHHHHHcCCHhHHHHHHHc
Confidence 999999999999999888 55554433 467777888888888999999988
Q ss_pred CCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccc-cccccCCCCCCcHHHHHHhcCCcceeehhhhc-ccCCcccc
Q 046373 235 DPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLAR-SLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRY-DAGGNYGA 312 (364)
Q Consensus 235 ~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~-~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~-~~~~~~~~ 312 (364)
|.+ ++..|..|+||||+|+..|+.+++++|++. + ++++.+|..|.||||+|+..++ ...+.+|+ +.|++++.
T Consensus 130 g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~d~~g~t~L~~A~~~~~--~~~v~~Ll~~~ga~~~~ 203 (228)
T 2dzn_A 130 GAS-VRIKDKFNQIPLHRAASVGSLKLIELLCGL---GKSAVNWQDKQGWTPLFHALAEGH--GDAAVLLVEKYGAEYDL 203 (228)
T ss_dssp TCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHTT---TCCCSCCCCTTSCCHHHHHHHTTC--HHHHHHHHHHHCCCSCC
T ss_pred CCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHhc---CcccccCcCCCCCCHHHHHHHcCC--HHHHHHHHHhcCCCCCc
Confidence 888 577888899999999999999999999887 6 8888888889999999999988 56666666 77888888
Q ss_pred cccCCCchhHHhhh
Q 046373 313 VNKQNVSVTDVLIY 326 (364)
Q Consensus 313 ~n~~g~t~l~~a~~ 326 (364)
+|..|+||+++|..
T Consensus 204 ~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 204 VDNKGAKAEDVALN 217 (228)
T ss_dssp BCTTSCBGGGGCSS
T ss_pred cCCCCCcHHHHHHH
Confidence 99999999999854
No 27
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=5.9e-39 Score=275.77 Aligned_cols=220 Identities=22% Similarity=0.168 Sum_probs=162.9
Q ss_pred hhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCC
Q 046373 36 TAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNN 115 (364)
Q Consensus 36 ~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~ 115 (364)
.+.+|.||||+| ++.|+.+++++|++. ......++..+..|.||||+|+..|+.+++++|+++|++ ++..+.
T Consensus 5 ~d~~g~t~L~~A--~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-----~~~~~~ 76 (282)
T 1oy3_D 5 VTEDGDTALHLA--VIHQHEPFLDFLLGF-SAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG-----VLVAER 76 (282)
T ss_dssp CCTTCCCHHHHH--HHTTCHHHHHHHHHH-HTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----SSCCCT
T ss_pred cCCCCCcHHHHH--HHcCCHHHHHHHHhc-CCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCCCCC
Confidence 345777777777 777777777777764 111222666777777777777777777777777777755 566677
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCC----------------------------------------------CCCCCc
Q 046373 116 EKNTALHEAVCHGNVQVVKILTKQDPDY----------------------------------------------PYSENK 149 (364)
Q Consensus 116 ~g~t~l~~a~~~~~~e~v~~Ll~~~~~~----------------------------------------------~~~~~~ 149 (364)
.|.||||+|+..|+.+++++|+++++.. ....+.
T Consensus 77 ~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (282)
T 1oy3_D 77 GGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENY 156 (282)
T ss_dssp TSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCT
T ss_pred CCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCC
Confidence 7777777777777777777777765441 225567
Q ss_pred CCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHH
Q 046373 150 YGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVE 229 (364)
Q Consensus 150 ~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~ 229 (364)
.|.||||+|+..|+.+++++|+++|++++..+. ..|.||||+|+..|+.++++
T Consensus 157 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~---------------------------~~g~tpL~~A~~~~~~~~v~ 209 (282)
T 1oy3_D 157 DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEP---------------------------TCGRTPLHLAVEAQAASVLE 209 (282)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT---------------------------TTCCCHHHHHHHTTCHHHHH
T ss_pred CCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC---------------------------CCCcCHHHHHHHcCCHHHHH
Confidence 899999999999999999999999988875442 14889999999999999999
Q ss_pred HHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCC
Q 046373 230 TILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRP 294 (364)
Q Consensus 230 ~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~ 294 (364)
+|+++|++ ++.+|..|+||||+|+..++.+++++|+++ |++++.+|..|.|||++|....+
T Consensus 210 ~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 210 LLLKAGAD-PTARMYGGRTPLGSALLRPNPILARLLRAH---GAPEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp HHHHTTCC-TTCCCTTSCCHHHHHHTSSCHHHHHHHHHT---TCCCCCCC---------------
T ss_pred HHHHcCCC-CcccccCCCCHHHHHHHcCCcHHHHHHHHc---CCCcCcCCCcccccccccCCccc
Confidence 99999999 588999999999999999999999999998 99999999999999999988765
No 28
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.2e-39 Score=272.35 Aligned_cols=220 Identities=20% Similarity=0.211 Sum_probs=133.5
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHh---HhhhcCCCCCCcHHHHHHHcCCH-HHHHHHHhcCCCCCCCCCcC
Q 046373 75 VNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAW---QMMRMTNNEKNTALHEAVCHGNV-QVVKILTKQDPDYPYSENKY 150 (364)
Q Consensus 75 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~---~~~~~~~~~g~t~l~~a~~~~~~-e~v~~Ll~~~~~~~~~~~~~ 150 (364)
+|..+.+||+.|+..|+.++|++|++.++.+.. ..++..+..|.|||+.|+..+.. .++++|++.|++++ ..+..
T Consensus 7 kd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn-~~d~~ 85 (269)
T 4b93_B 7 KDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVN-VTSQD 85 (269)
T ss_dssp CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTT-CCCTT
T ss_pred cCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCC-CcCCC
Confidence 345556777777777777777777776654211 12344566677777777766654 46777777777765 56667
Q ss_pred CchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHH
Q 046373 151 GKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVET 230 (364)
Q Consensus 151 ~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~ 230 (364)
|.||||+|+..|+.+++++|++.|++++..+. .|.||++.|+..++.+++++
T Consensus 86 G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~----------------------------~g~t~l~~a~~~~~~~~~~~ 137 (269)
T 4b93_B 86 GSSPLHVAALHGRADLIPLLLKHGANAGARNA----------------------------DQAVPLHLACQQGHFQVVKC 137 (269)
T ss_dssp SCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCT----------------------------TCCCHHHHHHHHTCHHHHHH
T ss_pred CCCHHHHHHHcCcHHHHHHHHhcCCCcCccCC----------------------------CCCCccccccccChHHHHHH
Confidence 77777777777777777777777777665444 35556666666677777777
Q ss_pred HHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCCcceeehhhhcccCCcc
Q 046373 231 ILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRYDAGGNY 310 (364)
Q Consensus 231 Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~~~~~ 310 (364)
|++++++ ++.+|..|+||||+|+..|+.+++++|++. |+++|.++..|.||||+|+..|+ ..++.+|+++|+++
T Consensus 138 Ll~~g~~-~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~---gadvn~~~~~g~t~Lh~A~~~g~--~~~v~~Ll~~Gad~ 211 (269)
T 4b93_B 138 LLDSNAK-PNKKDLSGNTPLIYACSGGHHELVALLLQH---GASINASNNKGNTALHEAVIEKH--VFVVELLLLHGASV 211 (269)
T ss_dssp HHHTTCC-SCCCCTTCCCHHHHHHHTTCGGGHHHHHHT---TCCTTCBCTTSCBHHHHHHHTTC--HHHHHHHHHTTCCS
T ss_pred HHHCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHHC---CCCCCccccCCCcHHHHHHHcCC--HHHHHHHHHCCCCC
Confidence 7777777 466777777777777777777777777776 77777777777777777777777 55556666777777
Q ss_pred cccccCCCchhHHhhhccc
Q 046373 311 GAVNKQNVSVTDVLIYGSR 329 (364)
Q Consensus 311 ~~~n~~g~t~l~~a~~~~~ 329 (364)
+.+|..|+||||+|+.++.
T Consensus 212 ~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 212 QVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp CCCCTTSCCSGGGSCTTCH
T ss_pred CCcCCCCCCHHHHHHhCCc
Confidence 7777777777777765443
No 29
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=7e-38 Score=260.59 Aligned_cols=214 Identities=27% Similarity=0.296 Sum_probs=187.3
Q ss_pred CCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhc-CCCCCC
Q 046373 40 KNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRM-TNNEKN 118 (364)
Q Consensus 40 g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~-~~~~g~ 118 (364)
|.||||+| ++.|+.+++++|++. .+...+..|..|.||||+|+..|+.+++++|++.++.. .+.. .+..|.
T Consensus 2 g~t~L~~A--~~~g~~~~v~~Ll~~---~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~---~~~~~~~~~g~ 73 (228)
T 2dzn_A 2 SNYPLHQA--CMENEFFKVQELLHS---KPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV---NLDDYPDDSGW 73 (228)
T ss_dssp -CCHHHHH--HHTTCHHHHHHHHHH---CGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTC---CGGGCCCTTSC
T ss_pred CccHHHHH--HHhCCHHHHHHHHhc---CccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccc---cccccCCCCCC
Confidence 78999999 999999999999884 34445558999999999999999999999999998431 1344 788999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcC--CCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhh
Q 046373 119 TALHEAVCHGNVQVVKILTKQD--PDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFY 196 (364)
Q Consensus 119 t~l~~a~~~~~~e~v~~Ll~~~--~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~ 196 (364)
||||+|+..|+.+++++|++++ +++. ..+..|.||||+|+..++.+++++|++.|++++.++.
T Consensus 74 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-------------- 138 (228)
T 2dzn_A 74 TPFHIACSVGNLEVVKSLYDRPLKPDLN-KITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDK-------------- 138 (228)
T ss_dssp CHHHHHHHHCCHHHHHHHHSSSSCCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCT--------------
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCcccc-cCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCC--------------
Confidence 9999999999999999999998 6654 6778899999999999999999999999999876654
Q ss_pred hhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHH-hCccccccc
Q 046373 197 FENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILL-KNPLARSLI 275 (364)
Q Consensus 197 ~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll-~~~~~~~~i 275 (364)
.|.||||.|+..|+.+++++|++++...++..|..|+||||+|+..++.+++++|+ +. |+++
T Consensus 139 --------------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~---ga~~ 201 (228)
T 2dzn_A 139 --------------FNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKY---GAEY 201 (228)
T ss_dssp --------------TSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHH---CCCS
T ss_pred --------------CCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhc---CCCC
Confidence 57778888888999999999999994447889999999999999999999999999 76 8999
Q ss_pred ccCCCCCCcHHHHHHhcC
Q 046373 276 YEGDNNGNTPLHVLAAIR 293 (364)
Q Consensus 276 ~~~d~~g~t~L~~A~~~~ 293 (364)
+.+|..|.||||+|+..+
T Consensus 202 ~~~~~~g~t~l~~A~~~~ 219 (228)
T 2dzn_A 202 DLVDNKGAKAEDVALNEQ 219 (228)
T ss_dssp CCBCTTSCBGGGGCSSTT
T ss_pred CccCCCCCcHHHHHHHHH
Confidence 999999999999997653
No 30
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.9e-39 Score=272.86 Aligned_cols=211 Identities=22% Similarity=0.243 Sum_probs=140.8
Q ss_pred ChhHHHHHhcCChHHhhhccCChhHH-------HhhhhccCCchHHHHHHHHHhcCC-ChHHHHHHHhcCCccccccCCC
Q 046373 7 YPNFFNAAAAGDAETFKRNTTSDEIE-------SLLTAQTKNTILHINIISQKRKNG-STKFIGEMLKKCPSLLLQVNAK 78 (364)
Q Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~~~~-------~~~~~~~g~t~L~~A~~~~~~~~~-~~~~l~~~l~~~~~~~~~~~~~ 78 (364)
.++|+.||..|++++|++|++.+..+ ....+..|.||||.| +..+..+ ++++|++. +.+++..|.+
T Consensus 12 ~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a--~~~~~~~~~v~~Ll~~----Gadvn~~d~~ 85 (269)
T 4b93_B 12 VEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQC--PKCAPAQKRLAKVPAS----GLGVNVTSQD 85 (269)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTCC------------------------------------------C----CCCTTCCCTT
T ss_pred hhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHH--HHhCCHHHHHHHHHHC----CCCCCCcCCC
Confidence 36899999999999999999986221 124455677888888 7665543 55666553 7777888888
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHH
Q 046373 79 GDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMA 158 (364)
Q Consensus 79 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A 158 (364)
|+||||+|+..|+.++|++|++.+++ ++..+..|.||+|+|+..++.+++++|++.|++++ ..|..|.||||+|
T Consensus 86 G~TpLh~A~~~g~~~~v~~Ll~~~a~-----~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n-~~d~~g~TpL~~A 159 (269)
T 4b93_B 86 GSSPLHVAALHGRADLIPLLLKHGAN-----AGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPN-KKDLSGNTPLIYA 159 (269)
T ss_dssp SCCHHHHHHHTTCTTHHHHHHHTTCC-----TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTCCCHHHHH
T ss_pred CCCHHHHHHHcCcHHHHHHHHhcCCC-----cCccCCCCCCccccccccChHHHHHHHHHCCCCCC-CCCCCCCCHHHHH
Confidence 88888888888888888888887765 56677778888888888888888888888877755 5677788888888
Q ss_pred HhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcc
Q 046373 159 AEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKC 238 (364)
Q Consensus 159 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~ 238 (364)
+..|+.+++++|++.|++++..+. .|.||||+|+..|+.+++++|+++|++
T Consensus 160 ~~~g~~~~v~~Ll~~gadvn~~~~----------------------------~g~t~Lh~A~~~g~~~~v~~Ll~~Gad- 210 (269)
T 4b93_B 160 CSGGHHELVALLLQHGASINASNN----------------------------KGNTALHEAVIEKHVFVVELLLLHGAS- 210 (269)
T ss_dssp HHTTCGGGHHHHHHTTCCTTCBCT----------------------------TSCBHHHHHHHTTCHHHHHHHHHTTCC-
T ss_pred HHCCCHHHHHHHHHCCCCCCcccc----------------------------CCCcHHHHHHHcCCHHHHHHHHHCCCC-
Confidence 888888888888888877765443 466677777777788888888888777
Q ss_pred cccccCCCCcHHHHHHHcCC
Q 046373 239 YELVDHRGWNFLHYAMVSFK 258 (364)
Q Consensus 239 ~~~~d~~g~t~l~~a~~~~~ 258 (364)
++.+|..|+||||+|+..++
T Consensus 211 ~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 211 VQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp SCCCCTTSCCSGGGSCTTCH
T ss_pred CCCcCCCCCCHHHHHHhCCc
Confidence 47777788888888876654
No 31
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=4e-37 Score=255.16 Aligned_cols=214 Identities=20% Similarity=0.158 Sum_probs=124.2
Q ss_pred hcCCChHHHHHHHhcCCccccc-cCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHH
Q 046373 53 RKNGSTKFIGEMLKKCPSLLLQ-VNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQ 131 (364)
Q Consensus 53 ~~~~~~~~l~~~l~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e 131 (364)
|+.+++++|++. +.+++. .|..|.||||+|+..|+.+++++|++++++ ++..+..|.||||+|+..|+.+
T Consensus 2 g~~~~i~~Ll~~----g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~~~ 72 (223)
T 2f8y_A 2 DAPAVISDFIYQ----GASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD-----ANIQDNMGRTPLHAAVSADAQG 72 (223)
T ss_dssp ---CCEETTEET----TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTCHH
T ss_pred CcHHHHHHHHHc----CCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCC-----CCCcCCCCCCHHHHHHHcCCHH
Confidence 445555555442 333332 355666666666666666666666666544 4555566666666666666666
Q ss_pred HHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCC
Q 046373 132 VVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDR 211 (364)
Q Consensus 132 ~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~ 211 (364)
++++|++.++......+..|.||||+|+..++.+++++|++.|++++..+. .
T Consensus 73 ~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~----------------------------~ 124 (223)
T 2f8y_A 73 VFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDD----------------------------L 124 (223)
T ss_dssp HHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT----------------------------T
T ss_pred HHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCC----------------------------C
Confidence 666666665533335555566666666666666666666666665543332 3
Q ss_pred CchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHh
Q 046373 212 KMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAA 291 (364)
Q Consensus 212 ~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~ 291 (364)
|.||||.|+..|+.+++++|++++++ ++..|..|.||||+|+..++.+++++|+++ +++++.+|..|.||||+|++
T Consensus 125 g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~t~l~~A~~ 200 (223)
T 2f8y_A 125 GKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYETAKVLLDH---FANRDITDHMDRLPRDIAQE 200 (223)
T ss_dssp SCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTCCCHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCcCHHHHHHHcCCHHHHHHHHHc---CCCCccccccCCCHHHHHHH
Confidence 45555555566666666666666655 355566666666666666666666666665 56666666666666666666
Q ss_pred cCCcceeehhhhcccCCc
Q 046373 292 IRPKEFFKIKVRYDAGGN 309 (364)
Q Consensus 292 ~~~~~~~~~~ll~~~~~~ 309 (364)
.++ ..++.+|++.|+.
T Consensus 201 ~~~--~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 201 RMH--HDIVRLLDEYNLV 216 (223)
T ss_dssp TTC--HHHHHHHHHTTCS
T ss_pred hcc--hHHHHHHHHcCCC
Confidence 666 4444445555554
No 32
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=2.5e-38 Score=271.88 Aligned_cols=253 Identities=19% Similarity=0.134 Sum_probs=210.0
Q ss_pred HHhcCChHHhhhccCChhHHHhhhhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCH
Q 046373 13 AAAAGDAETFKRNTTSDEIESLLTAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHS 92 (364)
Q Consensus 13 A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~ 92 (364)
+++..+.+.+..++..++ ....+..|.||||+| +..|+.+++++|++. +.+++.. +|.||||+|+..|+.
T Consensus 6 ~i~~~~~~~v~~lL~~~~--~~~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~--~g~t~L~~A~~~g~~ 75 (285)
T 3kea_A 6 RINTWKSKQLKSFLSSKD--TFKADVHGHSASYYA--IADNNVRLVCTLLNA----GALKNLL--ENEFPLHQAATLEDT 75 (285)
T ss_dssp TGGGCCHHHHHHHHHSTT--TTCCCTTSCCHHHHH--HHTTCHHHHHHHHHT----TGGGSCC--TTCCHHHHHTTSSSC
T ss_pred HHHhcCHHHHHHHHHhCC--CCccCCCCCCHHHHH--HHcCCHHHHHHHHhC----CCCCCCC--CCCCHHHHHHHcCCH
Confidence 455666666666665542 456777999999999 999999999999986 6777766 489999999999999
Q ss_pred HHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCC-chHHHHHHhcCCHHHHHHHH
Q 046373 93 NIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYG-KTSLYMAAEGRYSEMVIELL 171 (364)
Q Consensus 93 ~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~-~t~l~~A~~~~~~~~v~~Ll 171 (364)
+++++|+++|++ ++..+..|.||||+|+..|+.+++++|+++|++++ ..+..| .||||+|+..|+.+++++|+
T Consensus 76 ~~v~~Ll~~ga~-----~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~~t~L~~A~~~~~~~~v~~Ll 149 (285)
T 3kea_A 76 KIVKILLFSGLD-----DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLM-FYGKTGWKTSFYHAVMLNDVSIVSYFL 149 (285)
T ss_dssp HHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGG-GCSSSGGGSHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHCCCC-----CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC-ccCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 999999999876 67888999999999999999999999999999866 667777 79999999999999999999
Q ss_pred HcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcH-H
Q 046373 172 ENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNF-L 250 (364)
Q Consensus 172 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~-l 250 (364)
++|++.. ....|.||||.|+..|+.+++++|+++|++ ++..|..|+|| |
T Consensus 150 ~~g~~~~-----------------------------~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad-~n~~~~~g~t~~L 199 (285)
T 3kea_A 150 SEIPSTF-----------------------------DLAILLSCIHITIKNGHVDMMILLLDYMTS-TNTNNSLLFIPDI 199 (285)
T ss_dssp TTSCTTC-----------------------------CCSTHHHHHHHHHHTTCHHHHHHHHHHHHH-TCTTCCCBCCTTH
T ss_pred hCCCccc-----------------------------cccCCccHHHHHHHcChHHHHHHHHHcCCC-CCcccCCCCChHH
Confidence 9987642 111578999999999999999999999988 58889999997 9
Q ss_pred HHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCCcceeehhhhcccCCcccccccCCCchhHHhh
Q 046373 251 HYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRYDAGGNYGAVNKQNVSVTDVLI 325 (364)
Q Consensus 251 ~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~~~~~~~~n~~g~t~l~~a~ 325 (364)
|+|+..++.+++++|+++ |++++.+|. .|+..++ ...+.+|+++|++++..+. ...++.+.
T Consensus 200 ~~A~~~~~~~~v~~Ll~~---gad~~~~~~-------~a~~~~~--~~iv~~Ll~~g~~~~~~~~--~~~~~~~~ 260 (285)
T 3kea_A 200 KLAIDNKDIEMLQALFKY---DINIYSANL-------ENVLLDD--AEIAKMIIEKHVEYKSDSY--TKDLDIVK 260 (285)
T ss_dssp HHHHHHTCHHHHHHHTTS---CBCSTTTTG-------GGGTTTC--HHHHHHHHHHHHHHTTCTT--TTTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHc---CCCCCCCCh-------hhhhcCC--HHHHHHHHHcCCCCCCccc--cchHHHHh
Confidence 999999999999999998 899988873 4566788 7777888899998754443 33444443
No 33
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.9e-37 Score=257.97 Aligned_cols=229 Identities=19% Similarity=0.175 Sum_probs=183.2
Q ss_pred hccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCC
Q 046373 37 AQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNE 116 (364)
Q Consensus 37 ~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 116 (364)
+..|.++||.| ++.|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|+++++.. ....+..
T Consensus 6 d~~~~~~l~~A--~~~g~~~~~~~Ll~~----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~----~~~~~~~ 75 (240)
T 3eu9_A 6 DDYSTWDIVKA--TQYGIYERCRELVEA----GYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIV----DQLGGDL 75 (240)
T ss_dssp SCGGGCCHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCBTTT
T ss_pred ccccchHHHHH--HHcCChHHHHHHHHc----CCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcc----hhhcCCc
Confidence 44788899999 999999999998885 6778888888999999999999999999999988652 2233455
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhh
Q 046373 117 KNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFY 196 (364)
Q Consensus 117 g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~ 196 (364)
|.||||+|+..|+.+++++|++.|+++. ..+..|.||||+|+..|+.+++++|++.|++++..+..
T Consensus 76 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~------------- 141 (240)
T 3eu9_A 76 NSTPLHWATRQGHLSMVVQLMKYGADPS-LIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQN------------- 141 (240)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-------------
T ss_pred CCChhHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCC-------------
Confidence 8899999999999999999999888865 66778899999999999999999999999888766654
Q ss_pred hhcchhhhhhhccCCCchHHHHHHhcCC-HHHHHHHHhcCCcccccccC-CCCcHHHHHHHcCCHHHHHHHHhCcccccc
Q 046373 197 FENDQTAADIADKDRKMTALHLAAGQGH-ARTVETILFLDPKCYELVDH-RGWNFLHYAMVSFKLHELKILLKNPLARSL 274 (364)
Q Consensus 197 ~~~~~~~~~~~~~~~~~t~L~~a~~~~~-~~~~~~Ll~~~~~~~~~~d~-~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~ 274 (364)
|.||||.|+..+. .+++++|++.+.+ ++..+. .|.||||+|+..++.+++++|+++ |++
T Consensus 142 ---------------g~t~l~~a~~~~~~~~~~~~L~~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~ 202 (240)
T 3eu9_A 142 ---------------GMTPLMWAAYRTHSVDPTRLLLTFNVS-VNLGDKYHKNTALHWAVLAGNTTVISLLLEA---GAN 202 (240)
T ss_dssp ---------------SCCHHHHHHHHCCSSTTHHHHHHTTCC-TTCCCTTTCCCHHHHHHHHTCHHHHHHHHHH---TCC
T ss_pred ---------------CCcHHHHHHHhCChHHHHHHHHhcCCC-cchhhccCCCcHHHHHHHcCCHHHHHHHHHc---CCC
Confidence 4455555553333 6788888888888 455665 788999999999999999988887 888
Q ss_pred cccCCCCCCcHHHHHHhcCCcceeehhhhcccCCcc
Q 046373 275 IYEGDNNGNTPLHVLAAIRPKEFFKIKVRYDAGGNY 310 (364)
Q Consensus 275 i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~~~~~ 310 (364)
++.+|..|.||||+|++.++ ...+.+|++++++.
T Consensus 203 ~~~~~~~g~t~l~~A~~~~~--~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 203 VDAQNIKGESALDLAKQRKN--VWMINHLQEARQAK 236 (240)
T ss_dssp TTCBCTTSCBHHHHHHHTTC--HHHHHHHHHHC---
T ss_pred CCCcCCCCCCHHHHHHHcCc--HHHHHHHHHhhhcc
Confidence 88888888999999999888 66666666777664
No 34
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=4.7e-37 Score=266.27 Aligned_cols=236 Identities=21% Similarity=0.177 Sum_probs=160.7
Q ss_pred cCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCC
Q 046373 39 TKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKN 118 (364)
Q Consensus 39 ~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~ 118 (364)
.|.||||+| +..|+.+++++|++. +.+++..|..|.||||+|+..|+.+++++|+++|++ ++..+..|.
T Consensus 39 ~~~t~l~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-----~~~~~~~g~ 107 (299)
T 1s70_B 39 DDGAVFLAA--CSSGDTEEVLRLLER----GADINYANVDGLTALHQACIDDNVDMVKFLVENGAN-----INQPDNEGW 107 (299)
T ss_dssp CHHHHHHHH--HHHTCHHHHHHHHHH----CCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSC
T ss_pred CCccHHHHH--HHcCCHHHHHHHHHc----CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----CCCCCCCCC
Confidence 445666666 666666666666654 555666666666666666666666666666666544 455566666
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHc-CCCCCCCCCCCCChHHHHHHhhhh
Q 046373 119 TALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLEN-CTSVSHEGPNGKTALHAAAMHFYF 197 (364)
Q Consensus 119 t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~l~~a~~~~~~ 197 (364)
||||+|+..|+.+++++|+++|+++. ..+..|.||||+|+..++.+++++++.. +.+++.
T Consensus 108 tpL~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~------------------ 168 (299)
T 1s70_B 108 IPLHAAASCGYLDIAEYLISQGAHVG-AVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEA------------------ 168 (299)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHH------------------
T ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCC-CcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchh------------------
Confidence 66666666666666666666666544 4455566666666666666666655542 222110
Q ss_pred hcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCccccccccc
Q 046373 198 ENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYE 277 (364)
Q Consensus 198 ~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~ 277 (364)
.. ..+.++++ ..+..++..+.......+..|.||||+|+..|+.+++++|++. +++++.
T Consensus 169 ---------~~-~~~~~~~~--------~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---g~d~~~ 227 (299)
T 1s70_B 169 ---------AR-KEEERIML--------RDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQA---RYDVNI 227 (299)
T ss_dssp ---------HH-HHHHHHHH--------HHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTT---TCCTTC
T ss_pred ---------hh-hhhhhHHH--------HHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHc---CCCCCC
Confidence 00 01112222 2344455555554455678899999999999999999999998 899999
Q ss_pred CCCCCCcHHHHHHhcCCcceeehhhhcccCCcccccccCCCchhHHhhhc
Q 046373 278 GDNNGNTPLHVLAAIRPKEFFKIKVRYDAGGNYGAVNKQNVSVTDVLIYG 327 (364)
Q Consensus 278 ~d~~g~t~L~~A~~~~~~~~~~~~ll~~~~~~~~~~n~~g~t~l~~a~~~ 327 (364)
+|..|.||||+|+..|+ ...+.+|+++|++++.+|..|+||+|+|...
T Consensus 228 ~d~~g~tpL~~A~~~~~--~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~ 275 (299)
T 1s70_B 228 KDYDGWTPLHAAAHWGK--EEACRILVENLCDMEAVNKVGQTAFDVADED 275 (299)
T ss_dssp CCTTCCCHHHHHHHTTC--HHHHHHHHHTTCCTTCCCTTSCCTTTSCCSG
T ss_pred cCCCCCcHHHHHHhcCC--HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHH
Confidence 99999999999999999 6677788899999999999999999999653
No 35
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.2e-36 Score=252.24 Aligned_cols=211 Identities=19% Similarity=0.177 Sum_probs=189.4
Q ss_pred CChHHhhhccCChhHHHh-hhhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHH
Q 046373 17 GDAETFKRNTTSDEIESL-LTAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIV 95 (364)
Q Consensus 17 g~~~~v~~ll~~~~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v 95 (364)
|+++++++|++.+ .+.. ..+..|.||||+| +..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++
T Consensus 2 g~~~~i~~Ll~~g-~~~~~~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~~~~~~~~v 74 (223)
T 2f8y_A 2 DAPAVISDFIYQG-ASLHNQTDRTGETALHLA--ARYSRSDAAKRLLEA----SADANIQDNMGRTPLHAAVSADAQGVF 74 (223)
T ss_dssp ---CCEETTEETT-CCTTCCCTTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CcHHHHHHHHHcC-CCcccccCCCCCchHHHH--HHcCCHHHHHHHHHc----CCCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence 7889999999998 4443 4467999999999 999999999999986 788899999999999999999999999
Q ss_pred HHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCC
Q 046373 96 SFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCT 175 (364)
Q Consensus 96 ~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~ 175 (364)
++|++.++.. ++..+..|.||||+|+..++.+++++|++++++++ ..+..|.||||+|+..++.+++++|++.|+
T Consensus 75 ~~Ll~~~~~~----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 149 (223)
T 2f8y_A 75 QILIRNRATD----LDARMHDGTTPLILAARLAVEGMLEDLINSHADVN-AVDDLGKSALHWAAAVNNVDAAVVLLKNGA 149 (223)
T ss_dssp HHHHHBTTSC----TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CBCTTSCBHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHcCCCC----cccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCc-CcCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 9999988632 67788999999999999999999999999999876 678889999999999999999999999999
Q ss_pred CCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHH
Q 046373 176 SVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMV 255 (364)
Q Consensus 176 ~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~ 255 (364)
+++..+. .|.||||.|+..|+.+++++|++++++ ++.+|..|.||+++|+.
T Consensus 150 ~~~~~~~----------------------------~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~ 200 (223)
T 2f8y_A 150 NKDMQNN----------------------------REETPLFLAAREGSYETAKVLLDHFAN-RDITDHMDRLPRDIAQE 200 (223)
T ss_dssp CTTCCCT----------------------------TCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHH
T ss_pred CCCCcCC----------------------------CCcCHHHHHHHcCCHHHHHHHHHcCCC-CccccccCCCHHHHHHH
Confidence 9876655 567788888889999999999999998 58889999999999999
Q ss_pred cCCHHHHHHHHhC
Q 046373 256 SFKLHELKILLKN 268 (364)
Q Consensus 256 ~~~~~~~~~ll~~ 268 (364)
.++.+++++|+++
T Consensus 201 ~~~~~i~~~L~~~ 213 (223)
T 2f8y_A 201 RMHHDIVRLLDEY 213 (223)
T ss_dssp TTCHHHHHHHHHT
T ss_pred hcchHHHHHHHHc
Confidence 9999999999998
No 36
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.9e-36 Score=252.63 Aligned_cols=220 Identities=21% Similarity=0.219 Sum_probs=198.0
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCC
Q 046373 72 LLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYG 151 (364)
Q Consensus 72 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~ 151 (364)
++..|..|.|||+.|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++++++.....+..|
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 76 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYD-----VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLN 76 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTT
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCCC-----cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcC
Confidence 355688899999999999999999999999865 678889999999999999999999999999999887777779
Q ss_pred chHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHH
Q 046373 152 KTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETI 231 (364)
Q Consensus 152 ~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~L 231 (364)
.||||+|+..|+.+++++|++.|++++..+. .+.||||.|+..|+.+++++|
T Consensus 77 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~----------------------------~g~t~l~~A~~~~~~~~~~~L 128 (240)
T 3eu9_A 77 STPLHWATRQGHLSMVVQLMKYGADPSLIDG----------------------------EGCSCIHLAAQFGHTSIVAYL 128 (240)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT----------------------------TSCCHHHHHHHTTCHHHHHHH
T ss_pred CChhHHHHHcCCHHHHHHHHHcCCCCcccCC----------------------------CCCCHHHHHHHcCHHHHHHHH
Confidence 9999999999999999999999999876554 567888888889999999999
Q ss_pred HhcCCcccccccCCCCcHHHHHHHcCC-HHHHHHHHhCcccccccccCCC-CCCcHHHHHHhcCCcceeehhhhcccCCc
Q 046373 232 LFLDPKCYELVDHRGWNFLHYAMVSFK-LHELKILLKNPLARSLIYEGDN-NGNTPLHVLAAIRPKEFFKIKVRYDAGGN 309 (364)
Q Consensus 232 l~~~~~~~~~~d~~g~t~l~~a~~~~~-~~~~~~ll~~~~~~~~i~~~d~-~g~t~L~~A~~~~~~~~~~~~ll~~~~~~ 309 (364)
++++.+ ++..+..|.||||+|+..++ .+++++|++. +++++..+. .|.||||+|+..++ ...+.+|+++|++
T Consensus 129 l~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~---~~~~~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~g~~ 202 (240)
T 3eu9_A 129 IAKGQD-VDMMDQNGMTPLMWAAYRTHSVDPTRLLLTF---NVSVNLGDKYHKNTALHWAVLAGN--TTVISLLLEAGAN 202 (240)
T ss_dssp HHTTCC-TTCCCTTSCCHHHHHHHHCCSSTTHHHHHHT---TCCTTCCCTTTCCCHHHHHHHHTC--HHHHHHHHHHTCC
T ss_pred HhcCCC-ccccCCCCCcHHHHHHHhCChHHHHHHHHhc---CCCcchhhccCCCcHHHHHHHcCC--HHHHHHHHHcCCC
Confidence 999998 57889999999999997766 7899999998 899999987 89999999999999 6677788889999
Q ss_pred ccccccCCCchhHHhhhcccc
Q 046373 310 YGAVNKQNVSVTDVLIYGSRE 330 (364)
Q Consensus 310 ~~~~n~~g~t~l~~a~~~~~~ 330 (364)
++.+|..|+||+++|+..+..
T Consensus 203 ~~~~~~~g~t~l~~A~~~~~~ 223 (240)
T 3eu9_A 203 VDAQNIKGESALDLAKQRKNV 223 (240)
T ss_dssp TTCBCTTSCBHHHHHHHTTCH
T ss_pred CCCcCCCCCCHHHHHHHcCcH
Confidence 999999999999999765543
No 37
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=3.3e-38 Score=273.56 Aligned_cols=235 Identities=21% Similarity=0.198 Sum_probs=197.7
Q ss_pred ChhHHHHHhcCChHHhhhccCChhHHHhhhhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHH
Q 046373 7 YPNFFNAAAAGDAETFKRNTTSDEIESLLTAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLA 86 (364)
Q Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A 86 (364)
.++|+.|+..|++++|++|++.+ .+....+..|.||||+| +..|+.+++++|++. +.+++..|..|.||||+|
T Consensus 41 ~t~l~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A--~~~g~~~~v~~Ll~~----ga~~~~~~~~g~tpL~~A 113 (299)
T 1s70_B 41 GAVFLAACSSGDTEEVLRLLERG-ADINYANVDGLTALHQA--CIDDNVDMVKFLVEN----GANINQPDNEGWIPLHAA 113 (299)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHC-CCTTCBCTTCCBHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCCHHHHH--HHcCCHHHHHHHHHC----CCCCCCCCCCCCcHHHHH
Confidence 46899999999999999999998 77888888999999999 999999999999986 888999999999999999
Q ss_pred HHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHH
Q 046373 87 AKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEM 166 (364)
Q Consensus 87 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~ 166 (364)
+..|+.+++++|++++++ ++..+..|.||||+|+..++.+++++++..........+..+.++++ ..
T Consensus 114 ~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~--------~~ 180 (299)
T 1s70_B 114 ASCGYLDIAEYLISQGAH-----VGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIML--------RD 180 (299)
T ss_dssp HHHTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH--------HH
T ss_pred HHcCCHHHHHHHHhCCCC-----CCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHH--------HH
Confidence 999999999999999976 67889999999999999999999999887533211111111222222 23
Q ss_pred HHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCC
Q 046373 167 VIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKCYELVDHRG 246 (364)
Q Consensus 167 v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g 246 (364)
+..++..+.... ......|.||||.|+..|+.+++++|+++|++ ++..|..|
T Consensus 181 ~~~~l~~~~~~~---------------------------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d-~~~~d~~g 232 (299)
T 1s70_B 181 ARQWLNSGHIND---------------------------VRHAKSGGTALHVAAAKGYTEVLKLLIQARYD-VNIKDYDG 232 (299)
T ss_dssp HHHHHHHTCCCC---------------------------CCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTC
T ss_pred HHHHHhccCcch---------------------------hhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCC-CCCcCCCC
Confidence 444555543321 11223688999999999999999999999998 58899999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhc
Q 046373 247 WNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAI 292 (364)
Q Consensus 247 ~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~ 292 (364)
+||||+|+..|+.+++++|+++ |++++.+|..|.||||+|.+.
T Consensus 233 ~tpL~~A~~~~~~~~v~~Ll~~---gad~~~~d~~g~t~l~~A~~~ 275 (299)
T 1s70_B 233 WTPLHAAAHWGKEEACRILVEN---LCDMEAVNKVGQTAFDVADED 275 (299)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCTTTSCCSG
T ss_pred CcHHHHHHhcCCHHHHHHHHHc---CCCCCCcCCCCCCHHHHHHHH
Confidence 9999999999999999999998 999999999999999999653
No 38
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=7.7e-37 Score=255.66 Aligned_cols=221 Identities=21% Similarity=0.152 Sum_probs=130.3
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchH
Q 046373 75 VNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTS 154 (364)
Q Consensus 75 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~ 154 (364)
.|.+|.||||+|+..|+.+++++|++.+... ...++..+..|.||||+|+..|+.+++++|+++|+++. ..+..|.||
T Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~ 81 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGD-LAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPE-LRDFRGNTP 81 (236)
T ss_dssp ---CCCCTTHHHHHTTCSSSSSCCCC------CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSC-CCCTTCCCH
T ss_pred CCCCCCchhHHHHHcCChhHHHHHHHHhhcc-HHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCH
Confidence 4555666666666666666666665554320 01244555566666666666666666666666665544 455556666
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhc
Q 046373 155 LYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFL 234 (364)
Q Consensus 155 l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~ 234 (364)
||+|+..|+.+++++|++.|+++..... .......|.||||+|+..|+.+++++|+++
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~----------------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 139 (236)
T 1ikn_D 82 LHLACEQGCLASVGVLTQSCTTPHLHSI----------------------LKATNYNGHTCLHLASIHGYLGIVELLVSL 139 (236)
T ss_dssp HHHHHHHTCHHHHHHHHHSTTTTSSSCG----------------------GGCCCTTCCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhcccchhHHHH----------------------hhccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 6666666666666666666654321110 111223466677777777777777777777
Q ss_pred CCcccccccC-CCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCCcceeehhhhcccCCccc--
Q 046373 235 DPKCYELVDH-RGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRYDAGGNYG-- 311 (364)
Q Consensus 235 ~~~~~~~~d~-~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~~~~~~-- 311 (364)
|++ ++..+. .|+||||+|+..|+.+++++|+++ |++++.+|..|.||||+|+..++ ...+.+|+++|++..
T Consensus 140 g~~-~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~tpl~~A~~~~~--~~~~~~Ll~~ga~~~~~ 213 (236)
T 1ikn_D 140 GAD-VNAQEPCNGRTALHLAVDLQNPDLVSLLLKC---GADVNRVTYQGYSPYQLTWGRPS--TRIQQQLGQLTLENLQM 213 (236)
T ss_dssp TCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHTT---TCCSCCCCTTCCCGGGGCTTSSC--HHHHHHHHTTSCGGGSS
T ss_pred CCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCcccCCCCCHHHHHHccCc--hHHHHHHHHcchhhhhc
Confidence 666 355555 677777777777777777777776 66677777777777777777776 455555566666543
Q ss_pred ccccCCCchhHHhh
Q 046373 312 AVNKQNVSVTDVLI 325 (364)
Q Consensus 312 ~~n~~g~t~l~~a~ 325 (364)
..+..|.|+++.+.
T Consensus 214 ~~~~~~~~~~~~~~ 227 (236)
T 1ikn_D 214 LPESEDEESYDTES 227 (236)
T ss_dssp CCCCCTTTCCCCC-
T ss_pred CCccchHHHHhhhc
Confidence 66666777766653
No 39
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=7.7e-36 Score=256.40 Aligned_cols=201 Identities=16% Similarity=0.143 Sum_probs=181.4
Q ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcC
Q 046373 71 LLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKY 150 (364)
Q Consensus 71 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~ 150 (364)
+++..|..|.||||+|+..|+.+++++|++++++ ++.. +|.||||+|+..|+.+++++|+++|++++ ..+..
T Consensus 23 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~d~~ 94 (285)
T 3kea_A 23 DTFKADVHGHSASYYAIADNNVRLVCTLLNAGAL-----KNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDS-QFDDK 94 (285)
T ss_dssp TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGG-----GSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTT-CCCTT
T ss_pred CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-----CCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CcCCC
Confidence 4788999999999999999999999999999976 4444 59999999999999999999999999976 67888
Q ss_pred CchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCC-chHHHHHHhcCCHHHHH
Q 046373 151 GKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRK-MTALHLAAGQGHARTVE 229 (364)
Q Consensus 151 ~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~-~t~L~~a~~~~~~~~~~ 229 (364)
|.||||+|+..|+.+++++|+++|++++..+. .| .||||.|+..|+.++++
T Consensus 95 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~----------------------------~g~~t~L~~A~~~~~~~~v~ 146 (285)
T 3kea_A 95 GNTALYYAVDSGNMQTVKLFVKKNWRLMFYGK----------------------------TGWKTSFYHAVMLNDVSIVS 146 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSS----------------------------SGGGSHHHHHHHTTCHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCCCccCC----------------------------CCCCCHHHHHHHcCCHHHHH
Confidence 99999999999999999999999988765444 45 68899999999999999
Q ss_pred HHHhcCCcccccccC-CCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcH-HHHHHhcCCcceeehhhhcccC
Q 046373 230 TILFLDPKCYELVDH-RGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTP-LHVLAAIRPKEFFKIKVRYDAG 307 (364)
Q Consensus 230 ~Ll~~~~~~~~~~d~-~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~-L~~A~~~~~~~~~~~~ll~~~~ 307 (364)
+|++++++. .+. .|+||||+|+..|+.+++++|+++ |++++.+|..|.|| ||+|+..++ ...+.+|+++|
T Consensus 147 ~Ll~~g~~~---~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---gad~n~~~~~g~t~~L~~A~~~~~--~~~v~~Ll~~g 218 (285)
T 3kea_A 147 YFLSEIPST---FDLAILLSCIHITIKNGHVDMMILLLDY---MTSTNTNNSLLFIPDIKLAIDNKD--IEMLQALFKYD 218 (285)
T ss_dssp HHHTTSCTT---CCCSTHHHHHHHHHHTTCHHHHHHHHHH---HHHTCTTCCCBCCTTHHHHHHHTC--HHHHHHHTTSC
T ss_pred HHHhCCCcc---ccccCCccHHHHHHHcChHHHHHHHHHc---CCCCCcccCCCCChHHHHHHHcCC--HHHHHHHHHcC
Confidence 999999875 233 899999999999999999999998 99999999999998 999999999 77778888999
Q ss_pred Cccccccc
Q 046373 308 GNYGAVNK 315 (364)
Q Consensus 308 ~~~~~~n~ 315 (364)
++++.+|.
T Consensus 219 ad~~~~~~ 226 (285)
T 3kea_A 219 INIYSANL 226 (285)
T ss_dssp BCSTTTTG
T ss_pred CCCCCCCh
Confidence 99988874
No 40
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.8e-36 Score=253.47 Aligned_cols=221 Identities=20% Similarity=0.146 Sum_probs=187.3
Q ss_pred hhhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCC
Q 046373 35 LTAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTN 114 (364)
Q Consensus 35 ~~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 114 (364)
..+.+|.||||+| +..|+.+++++|++.....+.+++..+..|.||||+|+..|+.+++++|+++|++ ++..+
T Consensus 3 ~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~ 75 (236)
T 1ikn_D 3 QLTEDGDSFLHLA--IIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCD-----PELRD 75 (236)
T ss_dssp ----CCCCTTHHH--HHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCC-----SCCCC
T ss_pred cCCCCCCchhHHH--HHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCCcC
Confidence 3566999999999 9999999999999875555567899999999999999999999999999999876 78889
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCC-----CCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHH
Q 046373 115 NEKNTALHEAVCHGNVQVVKILTKQDPDY-----PYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALH 189 (364)
Q Consensus 115 ~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~-----~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~ 189 (364)
..|.||||+|+..|+.+++++|++.+.+. ....+..|.||||+|+..|+.+++++|++.|++++..+.
T Consensus 76 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~------- 148 (236)
T 1ikn_D 76 FRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEP------- 148 (236)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-------
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-------
Confidence 99999999999999999999999998642 345677899999999999999999999999999875543
Q ss_pred HHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCc
Q 046373 190 AAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNP 269 (364)
Q Consensus 190 ~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~ 269 (364)
..|.||||+|+..|+.+++++|+++|++ ++..|..|+||||+|+..++.+++++|+++
T Consensus 149 --------------------~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~- 206 (236)
T 1ikn_D 149 --------------------CNGRTALHLAVDLQNPDLVSLLLKCGAD-VNRVTYQGYSPYQLTWGRPSTRIQQQLGQL- 206 (236)
T ss_dssp --------------------TTCCCHHHHHHHTTCHHHHHHHHTTTCC-SCCCCTTCCCGGGGCTTSSCHHHHHHHHTT-
T ss_pred --------------------CCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcccCCCCCHHHHHHccCchHHHHHHHHc-
Confidence 1577888899999999999999999998 588999999999999999999999999998
Q ss_pred ccccccc--cCCCCCCcHHHHHHhcC
Q 046373 270 LARSLIY--EGDNNGNTPLHVLAAIR 293 (364)
Q Consensus 270 ~~~~~i~--~~d~~g~t~L~~A~~~~ 293 (364)
|++.. .++..|.||.+.+....
T Consensus 207 --ga~~~~~~~~~~~~~~~~~~~~~~ 230 (236)
T 1ikn_D 207 --TLENLQMLPESEDEESYDTESEFT 230 (236)
T ss_dssp --SCGGGSSCCCCCTTTCCCCC----
T ss_pred --chhhhhcCCccchHHHHhhhcccc
Confidence 66555 77888999887665543
No 41
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=9e-35 Score=242.45 Aligned_cols=203 Identities=22% Similarity=0.195 Sum_probs=172.7
Q ss_pred cCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCC
Q 046373 39 TKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKN 118 (364)
Q Consensus 39 ~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~ 118 (364)
.|.||||+| ++.|+.+++++|++ ..+.+++..|..|+||||+|+..|+.+++++|++.+++......+..+..|.
T Consensus 2 ~g~t~L~~A--~~~g~~~~v~~Ll~---~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~ 76 (232)
T 2rfa_A 2 IWESPLLLA--AKENDVQALSKLLK---FEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQ 76 (232)
T ss_dssp CTTCHHHHH--HHTTCHHHHHHHHT---TTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTC
T ss_pred CCCCHHHHH--HHcCCHHHHHHHHH---hcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCc
Confidence 589999999 99999999999977 4477889999999999999999999999999999997643322356678999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCCCC------------CcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCC
Q 046373 119 TALHEAVCHGNVQVVKILTKQDPDYPYSE------------NKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKT 186 (364)
Q Consensus 119 t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~------------~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 186 (364)
||||+|+..|+.+++++|+++|+++.... +..|.||||+|+..|+.+++++|+++|++++.++.
T Consensus 77 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~---- 152 (232)
T 2rfa_A 77 TALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDS---- 152 (232)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCT----
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC----
Confidence 99999999999999999999998876332 23699999999999999999999999999887665
Q ss_pred hHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHH----HHHHhcCCccc-----ccccCCCCcHHHHHHHcC
Q 046373 187 ALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTV----ETILFLDPKCY-----ELVDHRGWNFLHYAMVSF 257 (364)
Q Consensus 187 ~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~----~~Ll~~~~~~~-----~~~d~~g~t~l~~a~~~~ 257 (364)
.|.||||+|+..|+.+++ ++|+++++++. +.+|..|+||||+|+..|
T Consensus 153 ------------------------~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g 208 (232)
T 2rfa_A 153 ------------------------LGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEG 208 (232)
T ss_dssp ------------------------TSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHT
T ss_pred ------------------------CCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcC
Confidence 466777788888888877 99999998753 578999999999999999
Q ss_pred CHHHHHHHHhCccccccccc
Q 046373 258 KLHELKILLKNPLARSLIYE 277 (364)
Q Consensus 258 ~~~~~~~ll~~~~~~~~i~~ 277 (364)
+.+++++|+++ +.....
T Consensus 209 ~~~~v~~Ll~~---g~~~~~ 225 (232)
T 2rfa_A 209 NIVMFQHLMQK---RKHIAA 225 (232)
T ss_dssp CHHHHHHHHHH---HHHC--
T ss_pred CHHHHHHHHhc---Cccchh
Confidence 99999999997 554433
No 42
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=5.4e-36 Score=262.39 Aligned_cols=260 Identities=14% Similarity=0.075 Sum_probs=193.0
Q ss_pred ccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhc-----
Q 046373 38 QTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRM----- 112 (364)
Q Consensus 38 ~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~----- 112 (364)
....+|+|.. ..+++++|++. +.+++..+..|.|+++ |+.++|++|+++|.++....+..
T Consensus 21 ~~~~~~~~~~------~~dlv~~ll~~----ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~ 85 (327)
T 1sw6_A 21 DRTAGPIITF------THDLTSDFLSS----PLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNND 85 (327)
T ss_dssp ----CCEEEC------CTTCCCSTTTS----SCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------
T ss_pred cccccchhhh------cCchHHHHhhC----CcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcc
Confidence 3556666654 56788888875 8899999999999987 89999999999997642211100
Q ss_pred -------CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCC
Q 046373 113 -------TNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGK 185 (364)
Q Consensus 113 -------~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 185 (364)
......+..|.|+..+..+++++|++.|.+++...+..|.||||+|+..|+.+++++|+++|++++.++..|.
T Consensus 86 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~ 165 (327)
T 1sw6_A 86 SSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGE 165 (327)
T ss_dssp ------------------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCC
T ss_pred cccccccccCCccchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 1111223357778778889999999999998754888999999999999999999999999999999999999
Q ss_pred ChHHHHHHhhh----------hhcchhhhhhhccCCCchHHHHHHh----cCCHHHHHHHHhc-----------------
Q 046373 186 TALHAAAMHFY----------FENDQTAADIADKDRKMTALHLAAG----QGHARTVETILFL----------------- 234 (364)
Q Consensus 186 ~~l~~a~~~~~----------~~~~~~~~~~~~~~~~~t~L~~a~~----~~~~~~~~~Ll~~----------------- 234 (364)
||||+|+.... ++..... ....+..|.||||+|+. .|+.+++++|++.
T Consensus 166 TpLh~A~~~g~~~~~~~~~~ll~~~~~~-~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~ 244 (327)
T 1sw6_A 166 SCLVKAVKSVNNYDSGTFEALLDYLYPC-LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGT 244 (327)
T ss_dssp CHHHHHHHSSHHHHTTCHHHHHHHHGGG-GGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-
T ss_pred CHHHHHHHhcccccHHHHHHHHHhhhcc-ccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhh
Confidence 99999998532 2222111 22234689999999999 9999999999987
Q ss_pred ---CCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCCcceeehhhhcccCCccc
Q 046373 235 ---DPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRYDAGGNYG 311 (364)
Q Consensus 235 ---~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~~~~~~ 311 (364)
+.+ ++..+..|+||||+|+. +++|++. +++.+|..|+||||+|++.|+ ..++.+|+++|++++
T Consensus 245 ~~~g~~-~~~~~~~g~t~L~~a~~------~~~Ll~~-----~~n~~d~~G~TpLh~A~~~g~--~~~v~~Ll~~Gad~~ 310 (327)
T 1sw6_A 245 NEKESK-PNDKNGERKDSILENLD------LKWIIAN-----MLNAQDSNGDTCLNIAARLGN--ISIVDALLDYGADPF 310 (327)
T ss_dssp ----------------CHHHHHCS------HHHHHHH-----TTTCCCTTSCCHHHHHHHHCC--HHHHHHHHHTTCCTT
T ss_pred hcccCC-cccccccCCChhHHHHH------HHHHHHh-----CCCCCCCCCCCHHHHHHHcCC--HHHHHHHHHcCCCCc
Confidence 566 57789999999999986 7888874 589999999999999999999 677777889999999
Q ss_pred ccccCCCchhHHhhhc
Q 046373 312 AVNKQNVSVTDVLIYG 327 (364)
Q Consensus 312 ~~n~~g~t~l~~a~~~ 327 (364)
.+|..|+||||+|+..
T Consensus 311 ~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 311 IANKSGLRPVDFGAGL 326 (327)
T ss_dssp CCCTTSCCGGGGTCC-
T ss_pred ccCCCCCCHHHHHHhc
Confidence 9999999999999754
No 43
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=9.7e-35 Score=242.25 Aligned_cols=209 Identities=22% Similarity=0.164 Sum_probs=177.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHH-hhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC----CCCCcCCc
Q 046373 78 KGDTPLHLAAKFGHSNIVSFLIER-AKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYP----YSENKYGK 152 (364)
Q Consensus 78 ~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~----~~~~~~~~ 152 (364)
.|.||||+|+..|+.+++++|++. +.+ ++..+..|.||||+|+..|+.+++++|++.++++. ...+..|.
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~-----~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~ 76 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCE-----VHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQ 76 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSC-----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCC-----cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCc
Confidence 589999999999999999999997 654 78889999999999999999999999999988752 34567899
Q ss_pred hHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHH
Q 046373 153 TSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETIL 232 (364)
Q Consensus 153 t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll 232 (364)
||||+|+..|+.+++++|+++|++++..+..... . .........|.||||.|+..|+.+++++|+
T Consensus 77 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~--~-------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 141 (232)
T 2rfa_A 77 TALHIAVINQNVNLVRALLARGASVSARATGSVF--H-------------YRPHNLIYYGEHPLSFAACVGSEEIVRLLI 141 (232)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGG--S-------------CCTTCSCCCCSSHHHHHHHHTCHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcce--e-------------ecccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 9999999999999999999999998876653211 0 001112347999999999999999999999
Q ss_pred hcCCcccccccCCCCcHHHHHHHcCCHHHH----HHHHhCccccccc------ccCCCCCCcHHHHHHhcCCcceeehhh
Q 046373 233 FLDPKCYELVDHRGWNFLHYAMVSFKLHEL----KILLKNPLARSLI------YEGDNNGNTPLHVLAAIRPKEFFKIKV 302 (364)
Q Consensus 233 ~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~----~~ll~~~~~~~~i------~~~d~~g~t~L~~A~~~~~~~~~~~~l 302 (364)
++|++ ++.+|..|+||||+|+..++.+++ ++|++. ++++ +.+|..|.||||+|++.|+ ...+.+
T Consensus 142 ~~ga~-~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~---g~~~~~~~~~~~~~~~g~tpl~~A~~~g~--~~~v~~ 215 (232)
T 2rfa_A 142 EHGAD-IRAQDSLGNTVLHILILQPNKTFACQMYNLLLSY---DGGDHLKSLELVPNNQGLTPFKLAGVEGN--IVMFQH 215 (232)
T ss_dssp HTTCC-TTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHT---TCSCSSCCGGGCCCTTSCCHHHHHHHHTC--HHHHHH
T ss_pred HCCCC-CCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhc---CCchhhhhhhccCCCCCCCHHHHHHHcCC--HHHHHH
Confidence 99998 588999999999999999999988 888887 6665 6889999999999999999 666777
Q ss_pred hcccCCcccc
Q 046373 303 RYDAGGNYGA 312 (364)
Q Consensus 303 l~~~~~~~~~ 312 (364)
|+++|+....
T Consensus 216 Ll~~g~~~~~ 225 (232)
T 2rfa_A 216 LMQKRKHIAA 225 (232)
T ss_dssp HHHHHHHC--
T ss_pred HHhcCccchh
Confidence 7788776533
No 44
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=3.4e-34 Score=244.97 Aligned_cols=220 Identities=20% Similarity=0.201 Sum_probs=168.8
Q ss_pred HhhhhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCcccc----ccCCCCCcHHHHHHHc---CCHHHHHHHHHHhhHH
Q 046373 33 SLLTAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLL----QVNAKGDTPLHLAAKF---GHSNIVSFLIERAKLA 105 (364)
Q Consensus 33 ~~~~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~----~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~ 105 (364)
....+..|.||||+| ++.|+.++++.|++.....+..++ ..|..|.||||+|+.. |+.+++++|++.++..
T Consensus 6 ~~~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~ 83 (273)
T 2pnn_A 6 EKPPRLYDRRSIFDA--VAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKT 83 (273)
T ss_dssp -----CCCHHHHHHH--HHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHT
T ss_pred CCCCCcccchHHHHH--HHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccc
Confidence 345667999999999 999999999999987655555554 4578999999999987 9999999999998752
Q ss_pred Hh--Hhhh----cCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCc--------------CCchHHHHHHhcCCHH
Q 046373 106 AW--QMMR----MTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENK--------------YGKTSLYMAAEGRYSE 165 (364)
Q Consensus 106 ~~--~~~~----~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~--------------~~~t~l~~A~~~~~~~ 165 (364)
.. ..++ ..+..|.||||+|+..|+.+++++|+++|++++ ..+. .|.||||+|+..|+.+
T Consensus 84 ~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~ 162 (273)
T 2pnn_A 84 DSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQ-AAANGDFFKKTKGRPGFYFGELPLSLAACTNQLA 162 (273)
T ss_dssp TCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHH
T ss_pred cchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC-ccccccccccccccccccCCCCHHHHHHHcCCHH
Confidence 11 1122 256789999999999999999999999999976 4443 7999999999999999
Q ss_pred HHHHHHH---cCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCC---------HHHHHHHHh
Q 046373 166 MVIELLE---NCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGH---------ARTVETILF 233 (364)
Q Consensus 166 ~v~~Ll~---~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~---------~~~~~~Ll~ 233 (364)
++++|++ .|++++.++..|.||||+|+ ..|+ .+++++|++
T Consensus 163 ~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~----------------------------~~~~~~~~~~~~~~~~v~~Ll~ 214 (273)
T 2pnn_A 163 IVKFLLQNSWQPADISARDSVGNTVLHALV----------------------------EVADNTVDNTKFVTSMYNEILI 214 (273)
T ss_dssp HHHHHHHCSSCCCCTTCCCTTSCCHHHHHH----------------------------HHCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccCCCCceeeCCCCCcHHHHHH----------------------------HccCcchhHHHHHHHHHHHHHH
Confidence 9999999 99999988776655555554 4444 689999999
Q ss_pred cCCccc------ccccCCCCcHHHHHHHcCCHHHHHHHHhCccccc-ccccCCCCCCcHH
Q 046373 234 LDPKCY------ELVDHRGWNFLHYAMVSFKLHELKILLKNPLARS-LIYEGDNNGNTPL 286 (364)
Q Consensus 234 ~~~~~~------~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~-~i~~~d~~g~t~L 286 (364)
+|++.. +.+|..|+||||+|+..|+.+++++|+++ |+ +.......+.+|-
T Consensus 215 ~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~---ga~dp~~~~~~~~~~~ 271 (273)
T 2pnn_A 215 LGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQR---EIHEPECRHAAAHHHH 271 (273)
T ss_dssp HHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH---HTC-------------
T ss_pred hhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHC---CCCCchhhhhhhhhcc
Confidence 998842 25789999999999999999999999998 66 6666666666554
No 45
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=2.5e-34 Score=243.38 Aligned_cols=199 Identities=21% Similarity=0.177 Sum_probs=167.1
Q ss_pred cCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccc----cCCCCCcHHHHHHHc---CCHHHHHHHHHHhhHHHhHh--
Q 046373 39 TKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQ----VNAKGDTPLHLAAKF---GHSNIVSFLIERAKLAAWQM-- 109 (364)
Q Consensus 39 ~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~----~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~~~-- 109 (364)
.|.||||+| +..|+.+.++.+++.+...+.+++. .|..|.||||+|+.. |+.+++++|++.++......
T Consensus 1 ~G~t~L~~A--~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 78 (256)
T 2etb_A 1 FDRDRLFSV--VSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPL 78 (256)
T ss_dssp CCHHHHHHH--HHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCG
T ss_pred CCccHHHHH--HHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhh
Confidence 478999999 9999999887777665555788887 899999999999999 99999999999997631100
Q ss_pred ----hhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcC-------------CchHHHHHHhcCCHHHHHHHHH
Q 046373 110 ----MRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKY-------------GKTSLYMAAEGRYSEMVIELLE 172 (364)
Q Consensus 110 ----~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~-------------~~t~l~~A~~~~~~~~v~~Ll~ 172 (364)
....+..|.||||+|+..|+.+++++|+++|++++ ..+.. |.||||+|+..|+.+++++|++
T Consensus 79 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 157 (256)
T 2etb_A 79 VNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVH-LRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLE 157 (256)
T ss_dssp GGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHH
T ss_pred cccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 01234679999999999999999999999999976 44443 9999999999999999999999
Q ss_pred ---cCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHh--cCCHH-------HHHHHHhcCCccc-
Q 046373 173 ---NCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAG--QGHAR-------TVETILFLDPKCY- 239 (364)
Q Consensus 173 ---~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~--~~~~~-------~~~~Ll~~~~~~~- 239 (364)
.|++++.++..|.||| |+|+. .++.+ ++++|+++|+++.
T Consensus 158 ~~~~ga~~n~~d~~g~TpL----------------------------h~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~ 209 (256)
T 2etb_A 158 NPHQPASLEATDSLGNTVL----------------------------HALVMIADNSPENSALVIHMYDGLLQMGARLCP 209 (256)
T ss_dssp CSSCCCCTTCCCTTSCCHH----------------------------HHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHST
T ss_pred ccccCCCcCccCCCCCCHH----------------------------HHHHHcccCCchhhHHHHHHHHHHHHcCCCccc
Confidence 9999988777555555 55554 55666 9999999998842
Q ss_pred -----ccccCCCCcHHHHHHHcCCHHHHHHHHhC
Q 046373 240 -----ELVDHRGWNFLHYAMVSFKLHELKILLKN 268 (364)
Q Consensus 240 -----~~~d~~g~t~l~~a~~~~~~~~~~~ll~~ 268 (364)
+.+|..|+||||+|+..|+.+++++|+++
T Consensus 210 ~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 243 (256)
T 2etb_A 210 TVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQR 243 (256)
T ss_dssp TCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred ccccccccCCCCCCHHHHHHHhCCHHHHHHHHhC
Confidence 77899999999999999999999999997
No 46
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=1.4e-34 Score=247.36 Aligned_cols=233 Identities=15% Similarity=0.044 Sum_probs=174.7
Q ss_pred CccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhh----cCCCCCCcHHHHHHHc---CCHHHHHHHHhcCC
Q 046373 69 PSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMR----MTNNEKNTALHEAVCH---GNVQVVKILTKQDP 141 (364)
Q Consensus 69 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~----~~~~~g~t~l~~a~~~---~~~e~v~~Ll~~~~ 141 (364)
++..+..|..|.||||.|+..|+.++|+.|++.+..... .++ ..+..|.||||+|+.. |+.+++++|++.|+
T Consensus 3 ~a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga 81 (273)
T 2pnn_A 3 SAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKK-RLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVAR 81 (273)
T ss_dssp --------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCC-CTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHH
T ss_pred cccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhccc-ccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhc
Confidence 344566788999999999999999999999987643111 111 3478999999999987 99999999999875
Q ss_pred CCC----------CCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCC
Q 046373 142 DYP----------YSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDR 211 (364)
Q Consensus 142 ~~~----------~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~ 211 (364)
+.. ...+..|.||||+|+..|+.+++++|+++|++++..+..+.. .. .........
T Consensus 82 ~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~-----------~~---~~~~~~~~~ 147 (273)
T 2pnn_A 82 KTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFF-----------KK---TKGRPGFYF 147 (273)
T ss_dssp HTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGG-----------SS---CSSSCCCCS
T ss_pred cccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcccccccc-----------cc---ccccccccC
Confidence 421 124568999999999999999999999999999887764310 00 001112236
Q ss_pred CchHHHHHHhcCCHHHHHHHHh---cCCcccccccCCCCcHHHHHHHcCC---------HHHHHHHHhCcccccccc---
Q 046373 212 KMTALHLAAGQGHARTVETILF---LDPKCYELVDHRGWNFLHYAMVSFK---------LHELKILLKNPLARSLIY--- 276 (364)
Q Consensus 212 ~~t~L~~a~~~~~~~~~~~Ll~---~~~~~~~~~d~~g~t~l~~a~~~~~---------~~~~~~ll~~~~~~~~i~--- 276 (364)
|.||||+|+..|+.+++++|++ +|++ ++.+|..|+||||+|+..++ .+++++|++. |++++
T Consensus 148 g~tpL~~A~~~g~~~~v~~Ll~~~~~gad-~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~---ga~~n~~~ 223 (273)
T 2pnn_A 148 GELPLSLAACTNQLAIVKFLLQNSWQPAD-ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILIL---GAKLHPTL 223 (273)
T ss_dssp CBSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH---HHHHCTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccCCCC-ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHh---hhhccccc
Confidence 9999999999999999999999 8888 68899999999999999988 7899999997 88886
Q ss_pred ----cCCCCCCcHHHHHHhcCCcceeehhhhcccCC-cccccccCCCchhH
Q 046373 277 ----EGDNNGNTPLHVLAAIRPKEFFKIKVRYDAGG-NYGAVNKQNVSVTD 322 (364)
Q Consensus 277 ----~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~~~-~~~~~n~~g~t~l~ 322 (364)
.+|..|.||||+|++.|+ ..++.+|+++|+ ++......+.+|.+
T Consensus 224 ~~~~~~d~~g~TpL~~A~~~g~--~~iv~~Ll~~ga~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 224 KLEEITNRKGLTPLALAASSGK--IGVLAYILQREIHEPECRHAAAHHHHH 272 (273)
T ss_dssp CGGGCCCTTSCCHHHHHHHTTC--HHHHHHHHHHHTC--------------
T ss_pred ccccccCCCCCCHHHHHHHhCh--HHHHHHHHHCCCCCchhhhhhhhhccC
Confidence 489999999999999999 777778888999 77777777766644
No 47
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=4.7e-33 Score=226.79 Aligned_cols=181 Identities=19% Similarity=0.188 Sum_probs=96.6
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHH
Q 046373 78 KGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYM 157 (364)
Q Consensus 78 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~ 157 (364)
.+.||||.|+..|+.+.++.|+..+.. +++..+..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~~~----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~ 78 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDTTY----QVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADIN-LQNSISDSPYLY 78 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCTTC----CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHH
T ss_pred ccccHHHHHHHhccHHHHHHHHHcCCC----CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHH
Confidence 345555555555555555555554431 144455555555555555555555555555555543 344455555555
Q ss_pred HHhcCCHHHHHHHHH-cCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCC
Q 046373 158 AAEGRYSEMVIELLE-NCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDP 236 (364)
Q Consensus 158 A~~~~~~~~v~~Ll~-~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~ 236 (364)
|+..|+.+++++|++ .+++++..+. .|.||||.|+..|+.+++++|++++.
T Consensus 79 A~~~~~~~~~~~Ll~~~~~~~~~~~~----------------------------~g~t~L~~A~~~~~~~~v~~Ll~~g~ 130 (201)
T 3hra_A 79 AGAQGRTEILAYMLKHATPDLNKHNR----------------------------YGGNALIPAAEKGHIDNVKLLLEDGR 130 (201)
T ss_dssp HHHTTCHHHHHHHHHHSCCCTTCCCT----------------------------TSCCSHHHHHHTTCHHHHHHHHHHCC
T ss_pred HHHcCCHHHHHHHHhccCcccccccC----------------------------CCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 555555555555552 3334333222 34444455555555555555555552
Q ss_pred cccccccCCCCcHHHHHHHcCC-----HHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCC
Q 046373 237 KCYELVDHRGWNFLHYAMVSFK-----LHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRP 294 (364)
Q Consensus 237 ~~~~~~d~~g~t~l~~a~~~~~-----~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~ 294 (364)
..++..|..|+||||+|+..++ .+++++|+++ |++++.+|..|.||||+|++.|+
T Consensus 131 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~---ga~~~~~~~~g~t~l~~A~~~~~ 190 (201)
T 3hra_A 131 EDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMEN---GADQSIKDNSGRTAMDYANQKGY 190 (201)
T ss_dssp CCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHC---CCCCCccCCCCCCHHHHHHHcCC
Confidence 2245555555555555555555 5555555555 55555555555555555555555
No 48
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=4.9e-33 Score=226.65 Aligned_cols=192 Identities=22% Similarity=0.228 Sum_probs=164.6
Q ss_pred ccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCC
Q 046373 38 QTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEK 117 (364)
Q Consensus 38 ~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g 117 (364)
..+.||||.| +..|+.+.++.+++ ..+.+++..|..|.||||+|+..|+.+++++|++++++ ++..+..|
T Consensus 3 ~~~~~~L~~A--~~~g~~~~v~~ll~---~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g 72 (201)
T 3hra_A 3 TYEVGALLEA--ANQRDTKKVKEILQ---DTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD-----INLQNSIS 72 (201)
T ss_dssp CCCTTHHHHH--HHTTCHHHHHHHHT---CTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTS
T ss_pred cccccHHHHH--HHhccHHHHHHHHH---cCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCCCCCCC
Confidence 3688999999 99999888888876 45557888999999999999999999999999999876 67788899
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcC-CCCCCCCCCCCChHHHHHHhhh
Q 046373 118 NTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENC-TSVSHEGPNGKTALHAAAMHFY 196 (364)
Q Consensus 118 ~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~~~~l~~a~~~~~ 196 (364)
.||||+|+..|+.+++++|++.+.......+..|.||||+|+..|+.+++++|++.| ++++.++..
T Consensus 73 ~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~------------- 139 (201)
T 3hra_A 73 DSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDF------------- 139 (201)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTT-------------
T ss_pred CCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCC-------------
Confidence 999999999999999999996655444577888999999999999999999999998 888776664
Q ss_pred hhcchhhhhhhccCCCchHHHHHHhcCC-----HHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhC
Q 046373 197 FENDQTAADIADKDRKMTALHLAAGQGH-----ARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKN 268 (364)
Q Consensus 197 ~~~~~~~~~~~~~~~~~t~L~~a~~~~~-----~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~ 268 (364)
|.||||.|+..++ .+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++
T Consensus 140 ---------------g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 140 ---------------GYTALIEAVGLREGNQLYQDIVKLLMENGAD-QSIKDNSGRTAMDYANQKGYTEISKILAQY 200 (201)
T ss_dssp ---------------SCCHHHHHHHSSCCSHHHHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHTC
T ss_pred ---------------CCCHHHHHHHhccchhhHHHHHHHHHHCCCC-CCccCCCCCCHHHHHHHcCCHhHHHHHHhc
Confidence 4555556665565 8999999999988 578899999999999999999999999986
No 49
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=1.8e-35 Score=259.07 Aligned_cols=227 Identities=14% Similarity=0.078 Sum_probs=170.0
Q ss_pred hcCChHHhhhccCChhHHHhh-----------------hhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccc-cC
Q 046373 15 AAGDAETFKRNTTSDEIESLL-----------------TAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQ-VN 76 (364)
Q Consensus 15 ~~g~~~~v~~ll~~~~~~~~~-----------------~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~ 76 (364)
..|++++|++|++++ +++.. ......+.+|.| +..+..+++++|++ .+.+++. .|
T Consensus 56 ~~g~~~~v~~Ll~~g-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a--~~~~~~~~~~~l~~----~g~dvn~~~d 128 (327)
T 1sw6_A 56 DNEQKMKLEAFLQRL-LFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVS--FDSLLQEVNDAFPN----TQLNLNIPVD 128 (327)
T ss_dssp CHHHHHHHHHHHHHH-HC-------------------------------C--HHHHHHHHHHHCTT----SCCCSCSCCS
T ss_pred cCchhHHHHHHHHhc-cCCccccchHhhhcccccccccccCCccchhHHH--HHhhHHHHHHHHHh----cCCCcccccC
Confidence 339999999999987 43321 011112234556 55555555554444 4788999 89
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCC---HHHHHHHHhcCCCCCCCCCcCCch
Q 046373 77 AKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGN---VQVVKILTKQDPDYPYSENKYGKT 153 (364)
Q Consensus 77 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~---~e~v~~Ll~~~~~~~~~~~~~~~t 153 (364)
..|+||||+|+..|+.++|++|+++|++ ++..+..|.||||+|+..|+ .++++.|++.+.......+..|.|
T Consensus 129 ~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad-----~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~t 203 (327)
T 1sw6_A 129 EHGNTPLHWLTSIANLELVKHLVKHGSN-----RLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRT 203 (327)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCC
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCC-----CCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCC
Confidence 9999999999999999999999999976 78899999999999999998 677777777763334478889999
Q ss_pred HHHHHHh----cCCHHHHHHHHHc--------------------CCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhcc
Q 046373 154 SLYMAAE----GRYSEMVIELLEN--------------------CTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADK 209 (364)
Q Consensus 154 ~l~~A~~----~~~~~~v~~Ll~~--------------------~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~ 209 (364)
|||+|+. .|+.+++++|++. |++++..+.
T Consensus 204 pLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~--------------------------- 256 (327)
T 1sw6_A 204 ILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNG--------------------------- 256 (327)
T ss_dssp HHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------------------------------
T ss_pred HHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccc---------------------------
Confidence 9999999 8999999999987 555554444
Q ss_pred CCCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHH
Q 046373 210 DRKMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVL 289 (364)
Q Consensus 210 ~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A 289 (364)
.|.||||.|+. +++|++++ ++.+|..|+||||+|+..|+.+++++|+++ |++++.+|..|.||||+|
T Consensus 257 -~g~t~L~~a~~------~~~Ll~~~---~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~---Gad~~~~d~~G~TpL~~A 323 (327)
T 1sw6_A 257 -ERKDSILENLD------LKWIIANM---LNAQDSNGDTCLNIAARLGNISIVDALLDY---GADPFIANKSGLRPVDFG 323 (327)
T ss_dssp ----CHHHHHCS------HHHHHHHT---TTCCCTTSCCHHHHHHHHCCHHHHHHHHHT---TCCTTCCCTTSCCGGGGT
T ss_pred -cCCChhHHHHH------HHHHHHhC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCcccCCCCCCHHHHH
Confidence 45566666664 88889883 577899999999999999999999999998 999999999999999999
Q ss_pred HhcC
Q 046373 290 AAIR 293 (364)
Q Consensus 290 ~~~~ 293 (364)
++.|
T Consensus 324 ~~~g 327 (327)
T 1sw6_A 324 AGLE 327 (327)
T ss_dssp CC--
T ss_pred HhcC
Confidence 8764
No 50
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=8.9e-34 Score=240.02 Aligned_cols=207 Identities=20% Similarity=0.093 Sum_probs=174.8
Q ss_pred CCCcHHHHHHHcCCHH----HHHHHHHHhhHHHhHhhhc----CCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCCCCC
Q 046373 78 KGDTPLHLAAKFGHSN----IVSFLIERAKLAAWQMMRM----TNNEKNTALHEAVCH---GNVQVVKILTKQDPDYPYS 146 (364)
Q Consensus 78 ~g~t~L~~A~~~~~~~----~v~~Ll~~~~~~~~~~~~~----~~~~g~t~l~~a~~~---~~~e~v~~Ll~~~~~~~~~ 146 (364)
.|+||||.|+..|+.+ ++++|++.+.+ ++. .+..|.||||+|+.. |+.+++++|++.|++....
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~-----i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~ 75 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKY-----LTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNP 75 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCC-----TTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCS
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCC-----cccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccch
Confidence 3789999999999997 56677777765 565 789999999999999 9999999999998765422
Q ss_pred ----------CCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHH
Q 046373 147 ----------ENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTAL 216 (364)
Q Consensus 147 ----------~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L 216 (364)
.+..|.||||+|+..|+.+++++|+++|++++..+..+.++. ........|.|||
T Consensus 76 ~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~---------------~~~~~~~~g~tpL 140 (256)
T 2etb_A 76 KPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQK---------------HQGTCFYFGELPL 140 (256)
T ss_dssp SCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSC---------------CSSSCCCSCSSHH
T ss_pred hhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccc---------------cccccccCCCCHH
Confidence 246799999999999999999999999999998877543210 0111122499999
Q ss_pred HHHHhcCCHHHHHHHHh---cCCcccccccCCCCcHHHHHHH--cCCHH-------HHHHHHhCccccccc-------cc
Q 046373 217 HLAAGQGHARTVETILF---LDPKCYELVDHRGWNFLHYAMV--SFKLH-------ELKILLKNPLARSLI-------YE 277 (364)
Q Consensus 217 ~~a~~~~~~~~~~~Ll~---~~~~~~~~~d~~g~t~l~~a~~--~~~~~-------~~~~ll~~~~~~~~i-------~~ 277 (364)
|+|+..|+.+++++|++ +|++ ++.+|..|+||||+|+. .++.+ ++++|++. |+++ +.
T Consensus 141 ~~A~~~~~~~~v~~Ll~~~~~ga~-~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~---ga~~~~~~~~~~~ 216 (256)
T 2etb_A 141 SLAACTKQWDVVTYLLENPHQPAS-LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQM---GARLCPTVQLEEI 216 (256)
T ss_dssp HHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH---HHHHSTTCCGGGC
T ss_pred HHHHHcCCHHHHHHHHhccccCCC-cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHc---CCCcccccccccc
Confidence 99999999999999999 8888 68899999999999999 78888 99999998 8999 99
Q ss_pred CCCCCCcHHHHHHhcCCcceeehhhhcccCCcc
Q 046373 278 GDNNGNTPLHVLAAIRPKEFFKIKVRYDAGGNY 310 (364)
Q Consensus 278 ~d~~g~t~L~~A~~~~~~~~~~~~ll~~~~~~~ 310 (364)
+|..|.||||+|+..|+ ...+.+|+++|++.
T Consensus 217 ~d~~g~tpL~~A~~~g~--~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 217 SNHQGLTPLKLAAKEGK--IEIFRHILQREFSG 247 (256)
T ss_dssp CCTTSCCHHHHHHHTTC--HHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHhCC--HHHHHHHHhCCCCC
Confidence 99999999999999999 66677777887764
No 51
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=8.1e-34 Score=223.39 Aligned_cols=162 Identities=24% Similarity=0.324 Sum_probs=147.6
Q ss_pred CCChhHHHHHhcCChHHhhhccCChhHHHhhhhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHH
Q 046373 5 SIYPNFFNAAAAGDAETFKRNTTSDEIESLLTAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLH 84 (364)
Q Consensus 5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~ 84 (364)
++.++|+.||+.|++++|++|++.| .+.+..+..|.||||+| +..++.++++++++. +.+++..|..|+||||
T Consensus 3 dlg~~L~~Aa~~G~~~~v~~Ll~~G-advn~~d~~g~t~l~~a--~~~~~~~~~~~ll~~----gad~~~~d~~g~TpLh 75 (169)
T 4gpm_A 3 ELGKRLIEAAENGNKDRVKDLIENG-ADVNASDSDGRTPLHHA--AENGHKEVVKLLISK----GADVNAKDSDGRTPLH 75 (169)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSCCHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHH--HHcCCHHHHHHHHhc----ccchhhhccCCCCHHH
Confidence 3457899999999999999999998 87888888999999999 999999999999986 8889999999999999
Q ss_pred HHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCH
Q 046373 85 LAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYS 164 (364)
Q Consensus 85 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~ 164 (364)
+|+..|+.++|++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ ..|..|.|||++|+..|+.
T Consensus 76 ~A~~~g~~~~v~~Ll~~gad-----vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~G~TpL~~A~~~g~~ 149 (169)
T 4gpm_A 76 HAAENGHKEVVKLLISKGAD-----VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVN-TSDSDGRTPLDLAREHGNE 149 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCH
T ss_pred HHHHcCCHHHHHHHHHCcCC-----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcCCH
Confidence 99999999999999999976 78899999999999999999999999999999976 7888999999999999999
Q ss_pred HHHHHHHHcCCCCCC
Q 046373 165 EMVIELLENCTSVSH 179 (364)
Q Consensus 165 ~~v~~Ll~~~~~~~~ 179 (364)
+++++|+++|++++.
T Consensus 150 ~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 150 EVVKLLEKQGGWLEH 164 (169)
T ss_dssp HHHHHHHTC------
T ss_pred HHHHHHHHCCCCcCC
Confidence 999999999998764
No 52
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=5.5e-32 Score=212.92 Aligned_cols=152 Identities=28% Similarity=0.314 Sum_probs=81.4
Q ss_pred HHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhc
Q 046373 82 PLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEG 161 (364)
Q Consensus 82 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~ 161 (364)
+|+.|+..|+.++|++|+++|++ ++..|..|.||||+|+..++.+++++|++.|++++ ..+..|.||||+|+..
T Consensus 7 ~L~~Aa~~G~~~~v~~Ll~~Gad-----vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~-~~d~~g~TpLh~A~~~ 80 (169)
T 4gpm_A 7 RLIEAAENGNKDRVKDLIENGAD-----VNASDSDGRTPLHHAAENGHKEVVKLLISKGADVN-AKDSDGRTPLHHAAEN 80 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHCCCC-----CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchh-hhccCCCCHHHHHHHc
Confidence 45555555555555555555543 44555555555555555555555555555555543 4444555555555555
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCccccc
Q 046373 162 RYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKCYEL 241 (364)
Q Consensus 162 ~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~ 241 (364)
|+.+++++|++.|++++.++. .|.||||+|+..|+.+++++|+++|++ ++.
T Consensus 81 g~~~~v~~Ll~~gadvn~~d~----------------------------~G~TpLh~A~~~g~~~~v~~Ll~~gad-~~~ 131 (169)
T 4gpm_A 81 GHKEVVKLLISKGADVNAKDS----------------------------DGRTPLHHAAENGHKEVVKLLISKGAD-VNT 131 (169)
T ss_dssp TCHHHHHHHHHTTCCTTCCCT----------------------------TSCCHHHHHHHTTCHHHHHHHHHTTCC-TTC
T ss_pred CCHHHHHHHHHCcCCCCCCCC----------------------------CCCCHHHHHHHcCCHHHHHHHHHcCCC-ccc
Confidence 555555555555555544333 234444444455555555555555555 344
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHhC
Q 046373 242 VDHRGWNFLHYAMVSFKLHELKILLKN 268 (364)
Q Consensus 242 ~d~~g~t~l~~a~~~~~~~~~~~ll~~ 268 (364)
+|..|+||||+|+..|+.+++++|+++
T Consensus 132 ~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 158 (169)
T 4gpm_A 132 SDSDGRTPLDLAREHGNEEVVKLLEKQ 158 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 555555555555555555555555554
No 53
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=1.2e-32 Score=233.61 Aligned_cols=200 Identities=20% Similarity=0.225 Sum_probs=166.6
Q ss_pred ccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccC----CCCCcHHHHHH---HcCCHHHHHHHHHHhhHHHh---
Q 046373 38 QTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVN----AKGDTPLHLAA---KFGHSNIVSFLIERAKLAAW--- 107 (364)
Q Consensus 38 ~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~----~~g~t~L~~A~---~~~~~~~v~~Ll~~~~~~~~--- 107 (364)
..+.++||.| ++.|+.+.++.|++.+...+..++..+ ..|.||||+|+ ..|+.+++++|++.++.+..
T Consensus 3 ~~~~~~L~~A--~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~ 80 (260)
T 3jxi_A 3 VFNRPILFDI--VSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMRE 80 (260)
T ss_dssp CCCHHHHHHH--HHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHH
T ss_pred cchHHHHHHH--HHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHh
Confidence 4678999999 999999988888886555566666555 67999999999 67999999999999875311
Q ss_pred ---HhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCC--------------cCCchHHHHHHhcCCHHHHHHH
Q 046373 108 ---QMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSEN--------------KYGKTSLYMAAEGRYSEMVIEL 170 (364)
Q Consensus 108 ---~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~--------------~~~~t~l~~A~~~~~~~~v~~L 170 (364)
......+..|.||||+|+..|+.+++++|+++|++++ ..+ ..|.||||+|+..|+.+++++|
T Consensus 81 ~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 159 (260)
T 3jxi_A 81 FINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVH-AQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYL 159 (260)
T ss_dssp HHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHH
T ss_pred hhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcC-ccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 1133445589999999999999999999999999977 444 5799999999999999999999
Q ss_pred HH---cCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCC---------HHHHHHHHhcCCcc
Q 046373 171 LE---NCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGH---------ARTVETILFLDPKC 238 (364)
Q Consensus 171 l~---~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~---------~~~~~~Ll~~~~~~ 238 (364)
++ .|++++.++..|.||||+|+ ..++ .+++++|+++|+++
T Consensus 160 l~~~~~ga~~~~~d~~g~TpLh~A~----------------------------~~~~~~~~~~~~~~~~v~~Ll~~ga~~ 211 (260)
T 3jxi_A 160 TENGHKQADLRRQDSRGNTVLHALV----------------------------AIADNTRENTKFVTKMYDLLLIKCAKL 211 (260)
T ss_dssp HHCSSCCCCTTCCCTTSCCHHHHHH----------------------------HHCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhccccCCCCcccCCCCCcHHHHHH----------------------------HhccCchhHHHHHHHHHHHHHHhCccc
Confidence 99 89999988876655555554 3333 58999999999874
Q ss_pred c------ccccCCCCcHHHHHHHcCCHHHHHHHHhC
Q 046373 239 Y------ELVDHRGWNFLHYAMVSFKLHELKILLKN 268 (364)
Q Consensus 239 ~------~~~d~~g~t~l~~a~~~~~~~~~~~ll~~ 268 (364)
. +..|..|+||||+|+..|+.+++++|+++
T Consensus 212 ~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 247 (260)
T 3jxi_A 212 FPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRR 247 (260)
T ss_dssp CTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred ccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence 2 56899999999999999999999999998
No 54
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=4.5e-32 Score=230.09 Aligned_cols=210 Identities=18% Similarity=0.081 Sum_probs=169.9
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHH----HhhHHHhHhhhcC----CCCCCcHHHHHH---HcCCHHHHHHHHhcCCCC-
Q 046373 76 NAKGDTPLHLAAKFGHSNIVSFLIE----RAKLAAWQMMRMT----NNEKNTALHEAV---CHGNVQVVKILTKQDPDY- 143 (364)
Q Consensus 76 ~~~g~t~L~~A~~~~~~~~v~~Ll~----~~~~~~~~~~~~~----~~~g~t~l~~a~---~~~~~e~v~~Ll~~~~~~- 143 (364)
+..++|+||.|+..|+.+.++.|++ .+.. ++.. +..|.||||+|+ ..|+.+++++|++.+.+.
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~-----~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~ 76 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKR-----LTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTG 76 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCC-----TTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTT
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCC-----cchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhccccc
Confidence 4568899999999999996555555 6654 3333 367999999999 679999999999987431
Q ss_pred ---------CCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCch
Q 046373 144 ---------PYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMT 214 (364)
Q Consensus 144 ---------~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t 214 (364)
....+..|.||||+|+..|+.+++++|++.|++++..+..+... ..........|.|
T Consensus 77 ~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~--------------~~~~~~~~~~g~t 142 (260)
T 3jxi_A 77 NMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQ--------------PKDEGGYFYFGEL 142 (260)
T ss_dssp CHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCS--------------SSCCCCSCCSCSS
T ss_pred chHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccC--------------cccccccccCCCC
Confidence 12345589999999999999999999999999998776422100 0000011146899
Q ss_pred HHHHHHhcCCHHHHHHHHh---cCCcccccccCCCCcHHHHHHHcCC---------HHHHHHHHhCccccccc-------
Q 046373 215 ALHLAAGQGHARTVETILF---LDPKCYELVDHRGWNFLHYAMVSFK---------LHELKILLKNPLARSLI------- 275 (364)
Q Consensus 215 ~L~~a~~~~~~~~~~~Ll~---~~~~~~~~~d~~g~t~l~~a~~~~~---------~~~~~~ll~~~~~~~~i------- 275 (364)
|||+|+..|+.+++++|++ ++++ ++.+|..|+||||+|+..++ .+++++|++. |+++
T Consensus 143 pL~~A~~~g~~~~v~~Ll~~~~~ga~-~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~---ga~~~~~~~~~ 218 (260)
T 3jxi_A 143 PLSLAACTNQPHIVHYLTENGHKQAD-LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIK---CAKLFPDTNLE 218 (260)
T ss_dssp HHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHH---HHHHCTTCCGG
T ss_pred HHHHHHHcCCHHHHHHHHhccccCCC-CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHh---Ccccccccchh
Confidence 9999999999999999999 8888 68899999999999999888 7899999997 8888
Q ss_pred ccCCCCCCcHHHHHHhcCCcceeehhhhcccCCcc
Q 046373 276 YEGDNNGNTPLHVLAAIRPKEFFKIKVRYDAGGNY 310 (364)
Q Consensus 276 ~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~~~~~ 310 (364)
+.+|..|.||||+|++.|+ ...+.+|+++|++.
T Consensus 219 ~~~d~~g~tpL~~A~~~g~--~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 219 ALLNNDGLSPLMMAAKTGK--IGIFQHIIRREIAD 251 (260)
T ss_dssp GCCCTTSCCHHHHHHHTTC--HHHHHHHHHHHHHH
T ss_pred hcccCCCCCHHHHHHHcCC--HHHHHHHHHhCCCc
Confidence 7799999999999999999 77777777888774
No 55
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=4.8e-30 Score=203.56 Aligned_cols=170 Identities=17% Similarity=0.176 Sum_probs=118.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHH
Q 046373 79 GDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMA 158 (364)
Q Consensus 79 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A 158 (364)
+.||||.|+..|+.+++++|++.+... ++..+..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A 76 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNL----VNKPDERGFTPLIWASAFGEIETVRFLLEWGADPH-ILAKERESALSLA 76 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGG----GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT-CCCTTCCCHHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCccc----ccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCch-hhcccCCCHHHHH
Confidence 357777888888888777777776542 56667777778888777777788887777777755 5666777788888
Q ss_pred HhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcc
Q 046373 159 AEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKC 238 (364)
Q Consensus 159 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~ 238 (364)
+..++.+++++|++.|++++..+. .|.||||+|+..|+.+++++|+++|++
T Consensus 77 ~~~~~~~~v~~Ll~~g~~~~~~~~----------------------------~g~t~L~~A~~~~~~~~v~~Ll~~ga~- 127 (172)
T 3v30_A 77 STGGYTDIVGLLLERDVDINIYDW----------------------------NGGTPLLYAVRGNHVKCVEALLARGAD- 127 (172)
T ss_dssp HHTTCHHHHHHHHTTTCCTTCCCT----------------------------TSCCHHHHHHHTTCHHHHHHHHHTTCC-
T ss_pred HHCCCHHHHHHHHHcCCCCCCCCC----------------------------CCCCHHHHHHHcCCHHHHHHHHHcCCC-
Confidence 777777778877777777665444 455666667777777777777777777
Q ss_pred cccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcH
Q 046373 239 YELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTP 285 (364)
Q Consensus 239 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~ 285 (364)
++.+|..|+||||+|+..++.+++++|+++ ++++..++..|.||
T Consensus 128 ~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~---~~~~~~~~~~~~~p 171 (172)
T 3v30_A 128 LTTEADSGYTPMDLAVALGYRKVQQVIENH---ILKLFQSNLVPADP 171 (172)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHH---HHHHSCC-------
T ss_pred ccccCCCCCCHHHHHHHhCcHHHHHHHHHH---HHHHhcccCCCCCC
Confidence 466777777888888887777777777776 66666666666665
No 56
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=8.4e-30 Score=205.93 Aligned_cols=163 Identities=25% Similarity=0.229 Sum_probs=134.1
Q ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcC
Q 046373 71 LLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKY 150 (364)
Q Consensus 71 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~ 150 (364)
..+..|..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|+++++++. ..+..
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~ 100 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFDK-----LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVN-TKDFS 100 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCC-----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT-CCCTT
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccc-----cccccccCccHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCC
Confidence 3566788888888888888888888888888765 67778888888888888888888888888888765 66777
Q ss_pred CchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHH
Q 046373 151 GKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVET 230 (364)
Q Consensus 151 ~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~ 230 (364)
|.||||+|+..++.+++++|++.|++++.++. .|.||||+|+..|+.+++++
T Consensus 101 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~----------------------------~g~t~L~~A~~~~~~~~v~~ 152 (192)
T 2rfm_A 101 GKTPLMWSIIFGYSEMSYFLLEHGANVNDRNL----------------------------EGETPLIVASKYGRSEIVKK 152 (192)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCT----------------------------TCCCHHHHHHHHTCHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC----------------------------CCCCHHHHHHHcCCHHHHHH
Confidence 88888888888888888888888888776554 46677777777888888888
Q ss_pred HHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhC
Q 046373 231 ILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKN 268 (364)
Q Consensus 231 Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~ 268 (364)
|+++|++ ++.+|..|.||+|+|+..++.+++++|++.
T Consensus 153 Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 153 LLELGAD-ISARDLTGLTAEASARIFGRQEVIKIFTEV 189 (192)
T ss_dssp HHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHCCCC-CCCcCCCCCCHHHHHHHhCcHHHHHHHHhc
Confidence 8888887 577888888888888888888888888875
No 57
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=1.8e-30 Score=221.83 Aligned_cols=191 Identities=21% Similarity=0.180 Sum_probs=158.0
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHH
Q 046373 79 GDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMA 158 (364)
Q Consensus 79 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A 158 (364)
..+++|.|+..++.+.++.+++.+.. ..++..|..|.||||+|+..|+.+++++|++.|+......+..|.||||+|
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~---~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a 152 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLD---YVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLT 152 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHH---HHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHG
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHh---hcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHH
Confidence 45788889999999999998887754 336788899999999999999999999999998843457888899999999
Q ss_pred H-----hcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHh
Q 046373 159 A-----EGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILF 233 (364)
Q Consensus 159 ~-----~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~ 233 (364)
+ ..++.+++++|++.|...+..+. .|.||||+|+..|+.+++++|++
T Consensus 153 ~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~----------------------------~g~tpLh~A~~~g~~~~v~~Ll~ 204 (276)
T 4hbd_A 153 ALATLKTQDDIETVLQLFRLGNINAKASQ----------------------------AGQTALMLAVSHGRVDVVKALLA 204 (276)
T ss_dssp GGCCCCSHHHHHHHHHHHHHSCTTCCCTT----------------------------TCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHhhhhhhHHHHHHHHHcCCCccccCC----------------------------CCCCHHHHHHHcCCHHHHHHHHh
Confidence 8 66788999999998876554333 57788888888899999999999
Q ss_pred cCCcccccccCCCCcHHHHHHHcCCHHHHHHHHh-CcccccccccCCCCCCcHHHHHHhcCCcceeehhhhccc
Q 046373 234 LDPKCYELVDHRGWNFLHYAMVSFKLHELKILLK-NPLARSLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRYDA 306 (364)
Q Consensus 234 ~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~-~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~ 306 (364)
+|++ ++..|..|+||||+|+..|+.+++++|++ . +++++.+|..|.||||+|+..|+ ...+.+|+++
T Consensus 205 ~gad-~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~---gad~~~~d~~g~TpL~~A~~~g~--~~iv~~Ll~~ 272 (276)
T 4hbd_A 205 CEAD-VNVQDDDGSTALMCACEHGHKEIAGLLLAVP---SCDISLTDRDGSTALMVALDAGQ--SEIASMLYSR 272 (276)
T ss_dssp TTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHTST---TCCTTCCCTTSCCHHHHHHHHTC--HHHHHHHHHH
T ss_pred CCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcC---CCCCcCcCCCCCCHHHHHHHcCC--HHHHHHHHhc
Confidence 9988 57889999999999999999999999998 5 88899999999999999999999 4444444443
No 58
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=2.2e-30 Score=205.51 Aligned_cols=170 Identities=19% Similarity=0.135 Sum_probs=148.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhh
Q 046373 117 KNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFY 196 (364)
Q Consensus 117 g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~ 196 (364)
+.||||.|+..|+.+++++|++.++......+..|.||||+|+..|+.+++++|++.|++++..+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-------------- 67 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAK-------------- 67 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT--------------
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcc--------------
Confidence 468999999999999999999999886667888999999999999999999999999999876654
Q ss_pred hhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccc
Q 046373 197 FENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIY 276 (364)
Q Consensus 197 ~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~ 276 (364)
.+.||||.|+..|+.+++++|++++.+ ++..|..|+||||+|+..++.+++++|++. +++++
T Consensus 68 --------------~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~ 129 (172)
T 3v30_A 68 --------------ERESALSLASTGGYTDIVGLLLERDVD-INIYDWNGGTPLLYAVRGNHVKCVEALLAR---GADLT 129 (172)
T ss_dssp --------------TCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTT
T ss_pred --------------cCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCcc
Confidence 567788888889999999999999998 588899999999999999999999999998 89999
Q ss_pred cCCCCCCcHHHHHHhcCCcceeehhhhcccCCcccccccCCCch
Q 046373 277 EGDNNGNTPLHVLAAIRPKEFFKIKVRYDAGGNYGAVNKQNVSV 320 (364)
Q Consensus 277 ~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~~~~~~~~n~~g~t~ 320 (364)
.+|..|.||||+|+..++ ...+.+|+++|+++...|..|.||
T Consensus 130 ~~~~~g~t~l~~A~~~~~--~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 130 TEADSGYTPMDLAVALGY--RKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp CCCTTSCCHHHHHHHHTC--HHHHHHHHHHHHHHSCC-------
T ss_pred ccCCCCCCHHHHHHHhCc--HHHHHHHHHHHHHHhcccCCCCCC
Confidence 999999999999999999 777788889999988889888887
No 59
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=2.4e-30 Score=220.98 Aligned_cols=193 Identities=17% Similarity=0.165 Sum_probs=171.0
Q ss_pred ccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCC
Q 046373 38 QTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEK 117 (364)
Q Consensus 38 ~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g 117 (364)
....+++|.| +..++.+.++.+++... ...++..|..|.||||+|+..|+.+++++|++.++. .++..+..|
T Consensus 74 ~~~~~~l~~a--~~~~~~~~~~~l~~~~~--~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~----~~~~~~~~g 145 (276)
T 4hbd_A 74 LACRSDAHPE--LVRRHLVTFRAMSARLL--DYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVC----KVDKQNRAG 145 (276)
T ss_dssp HHHSTTCCHH--HHHHHHHHHHHHCHHHH--HHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCC----CTTCCCTTS
T ss_pred HHhccCCCHH--HHHHHHHHHHHHHHHHH--hhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC----cCCCCCCCC
Confidence 3567889999 99999999999887532 234788999999999999999999999999999972 278889999
Q ss_pred CcHHHHHH-----HcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHH
Q 046373 118 NTALHEAV-----CHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAA 192 (364)
Q Consensus 118 ~t~l~~a~-----~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~ 192 (364)
.||||+|+ ..++.+++++|++.|.... ..+..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 146 ~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~-~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~---------- 214 (276)
T 4hbd_A 146 YSPIMLTALATLKTQDDIETVLQLFRLGNINA-KASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDD---------- 214 (276)
T ss_dssp CCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTC-CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT----------
T ss_pred CCHHHHHHHHHhhhhhhHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCC----------
Confidence 99999999 5688999999999997754 6778899999999999999999999999999987665
Q ss_pred HhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHh-cCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhC
Q 046373 193 MHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILF-LDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKN 268 (364)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~-~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~ 268 (364)
.|.||||+|+..|+.+++++|++ .|++ ++.+|..|+||||+|+..|+.+++++|+++
T Consensus 215 ------------------~G~TpLh~A~~~g~~~iv~~Ll~~~gad-~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 272 (276)
T 4hbd_A 215 ------------------DGSTALMCACEHGHKEIAGLLLAVPSCD-ISLTDRDGSTALMVALDAGQSEIASMLYSR 272 (276)
T ss_dssp ------------------TSCCHHHHHHHHTCHHHHHHHHTSTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred ------------------CCCCHHHHHHHCCCHHHHHHHHhcCCCC-CcCcCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 56777888888899999999999 7887 688999999999999999999999999986
No 60
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=1.5e-29 Score=204.50 Aligned_cols=162 Identities=19% Similarity=0.143 Sum_probs=148.4
Q ss_pred hhhhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcC
Q 046373 34 LLTAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMT 113 (364)
Q Consensus 34 ~~~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 113 (364)
...+..|.||||+| +..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.+++ ++..
T Consensus 29 n~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~ 97 (192)
T 2rfm_A 29 NYRDSYNRTPLMVA--CMLGMENAIDKLVEN----FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN-----VNTK 97 (192)
T ss_dssp TCCCTTCCCHHHHH--HHHTCGGGHHHHHHH----HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-----TTCC
T ss_pred hCcCCCCCCHHHHH--HHcCCHHHHHHHHHh----ccccccccccCccHHHHHHHcCCHHHHHHHHHCCCC-----CCCC
Confidence 35677999999999 999999999999997 677888999999999999999999999999999876 7888
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHH
Q 046373 114 NNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAM 193 (364)
Q Consensus 114 ~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~ 193 (364)
+..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|++++.++.
T Consensus 98 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~----------- 165 (192)
T 2rfm_A 98 DFSGKTPLMWSIIFGYSEMSYFLLEHGANVN-DRNLEGETPLIVASKYGRSEIVKKLLELGADISARDL----------- 165 (192)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT-----------
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC-----------
Confidence 9999999999999999999999999999976 7788899999999999999999999999999876554
Q ss_pred hhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcC
Q 046373 194 HFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLD 235 (364)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~ 235 (364)
.|.|||++|+..|+.+++++|++++
T Consensus 166 -----------------~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 166 -----------------TGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp -----------------TSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred -----------------CCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 5778888899999999999999764
No 61
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=2.6e-31 Score=220.30 Aligned_cols=197 Identities=15% Similarity=0.011 Sum_probs=132.0
Q ss_pred HHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCC
Q 046373 96 SFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCT 175 (364)
Q Consensus 96 ~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~ 175 (364)
+.|+++++.+.. .+..+..+.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|++.|+
T Consensus 2 ~~ll~~~~~~~~--~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga 78 (229)
T 2vge_A 2 RSVLRKAGSPRK--ARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPS-QPNEEGITALHNAICGANYSIVDFLITAGA 78 (229)
T ss_dssp --------CCCC--CCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred eehhccCCCCcc--ccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 455666554211 22334556677777777777777777777777655 566677788888888888888888888777
Q ss_pred CCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCccccccc-CCCCcHHHHH-
Q 046373 176 SVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKCYELVD-HRGWNFLHYA- 253 (364)
Q Consensus 176 ~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d-~~g~t~l~~a- 253 (364)
+++..+. .|.||||+|+..|+.+++++|+++|+++ +..+ ..|+||||+|
T Consensus 79 ~~n~~d~----------------------------~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A~ 129 (229)
T 2vge_A 79 NVNSPDS----------------------------HGWTPLHCAASCNDTVICMALVQHGAAI-FATTLSDGATAFEKCD 129 (229)
T ss_dssp CTTCCCT----------------------------TCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCSSTTCCTGGGCC
T ss_pred CCCCCCC----------------------------CCCCHHHHHHHcCCHHHHHHHHHcCCCc-ccccCCCCCCHHHHHH
Confidence 7765544 4566666777777788888888877774 4454 5788888888
Q ss_pred -HHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCCcceeehhhhcccCCc--ccccccCCCchhHHhhhcccc
Q 046373 254 -MVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRYDAGGN--YGAVNKQNVSVTDVLIYGSRE 330 (364)
Q Consensus 254 -~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~~~~--~~~~n~~g~t~l~~a~~~~~~ 330 (364)
+..++.+++++|++. |++++.+|..|.||++.++.... ..+++..|++ ++.+|..|+||||+|+..+..
T Consensus 130 a~~~~~~~~v~~Ll~~---ga~~~~~~~~~~~~l~~~~~~~~-----~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~ 201 (229)
T 2vge_A 130 PYREGYADCATYLADV---EQSMGLMNSGAVYALWDYSAEFG-----DELSFREGESVTVLRRDGPEETDWWWAALHGQE 201 (229)
T ss_dssp TTSTTHHHHHHHHHHH---HHHTTTSGGGEEEESSCBCCSST-----TBCCBCTTCEEEEEESSCTTCSSEEEEEETTEE
T ss_pred HHhcChHHHHHHHHHc---CCCcccccCCchHHHHHHhhccc-----cccCccccccccccccCCCcccHHHHHHHcCCc
Confidence 778888888888876 77888888778888775444433 1345566776 667788888888888555444
Q ss_pred ee
Q 046373 331 LT 332 (364)
Q Consensus 331 ~~ 332 (364)
-.
T Consensus 202 ~~ 203 (229)
T 2vge_A 202 GY 203 (229)
T ss_dssp EE
T ss_pred ce
Confidence 43
No 62
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=8.3e-29 Score=195.42 Aligned_cols=156 Identities=21% Similarity=0.222 Sum_probs=118.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHH
Q 046373 78 KGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYM 157 (364)
Q Consensus 78 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~ 157 (364)
.|.||||.|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++.+++++ ..+..|.||||+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~ 75 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENV-----INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQ-LLGKGRESALSL 75 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSC-----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCC-----cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-CcCCCCCcHHHH
Confidence 467788888888888888888877754 66677778888888888888888888888777755 566677888888
Q ss_pred HHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCc
Q 046373 158 AAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPK 237 (364)
Q Consensus 158 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~ 237 (364)
|+..++.+++++|++.|++++..+. .|.||||.|+..|+.+++++|+++|++
T Consensus 76 A~~~~~~~~v~~Ll~~g~~~~~~~~----------------------------~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 127 (167)
T 3v31_A 76 ACSKGYTDIVKMLLDCGVDVNEYDW----------------------------NGGTPLLYAVHGNHVKCVKMLLESGAD 127 (167)
T ss_dssp HHHHTCHHHHHHHHHHTCCTTCCCT----------------------------TSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHcCCHHHHHHHHHCCCCCCcCCC----------------------------CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 8888888888888888877765544 456666677777778888888887777
Q ss_pred ccccccCCCCcHHHHHHHcCCHHHHHHHHhC
Q 046373 238 CYELVDHRGWNFLHYAMVSFKLHELKILLKN 268 (364)
Q Consensus 238 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~ 268 (364)
++..|..|+||+|+|+..|+.+++++|+++
T Consensus 128 -~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (167)
T 3v31_A 128 -PTIETDSGYNSMDLAVALGYRSVQQVIESH 157 (167)
T ss_dssp -TTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred -CCCcCCCCCCHHHHHHHcCcHHHHHHHHHH
Confidence 466777788888888888888888888775
No 63
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=2.6e-29 Score=197.33 Aligned_cols=156 Identities=22% Similarity=0.196 Sum_probs=119.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHH
Q 046373 78 KGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYM 157 (364)
Q Consensus 78 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~ 157 (364)
...||||.|+..|+.+++++|++++.+ ++..+..|.||||+|+. |+.+++++|+++|++++ ..+..|.||||+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~-----~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~ 76 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVN-----VNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPD-LKDRTGFAVIHD 76 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCC-----TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTT-CCCTTSCCHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCC-----ccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCC-CCCCCCCCHHHH
Confidence 345788888888888888888877754 56677778888888877 88888888888877755 566778888888
Q ss_pred HHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCc
Q 046373 158 AAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPK 237 (364)
Q Consensus 158 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~ 237 (364)
|+..|+.+++++|++.|++++.++. .|.||||+|+..|+.+++++|++++++
T Consensus 77 A~~~~~~~~v~~Ll~~g~~~~~~~~----------------------------~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 128 (162)
T 1ihb_A 77 AARAGFLDTLQTLLEFQADVNIEDN----------------------------EGNLPLHLAAKEGHLRVVEFLVKHTAS 128 (162)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCT----------------------------TSCCHHHHHHHTTCHHHHHHHHHHSCC
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCC----------------------------CCCCHHHHHHHcCCHHHHHHHHHccCC
Confidence 8888888888888888877765544 456667777777788888888888877
Q ss_pred ccccccCCCCcHHHHHHHcCCHHHHHHHHhC
Q 046373 238 CYELVDHRGWNFLHYAMVSFKLHELKILLKN 268 (364)
Q Consensus 238 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~ 268 (364)
+++..+..|+||||+|+..++.+++++|+++
T Consensus 129 ~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 159 (162)
T 1ihb_A 129 NVGHRNHKGDTACDLARLYGRNEVVSLMQAN 159 (162)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCCcCCCCCcHHHHHHHcCCHHHHHHHHHh
Confidence 6677777888888888888888888888876
No 64
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=6e-30 Score=200.95 Aligned_cols=158 Identities=21% Similarity=0.155 Sum_probs=145.6
Q ss_pred CChhHHHHHhcCChHHhhhccCChhHHHhhhhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHH
Q 046373 6 IYPNFFNAAAAGDAETFKRNTTSDEIESLLTAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHL 85 (364)
Q Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~ 85 (364)
..++|+.|+..|+++++++|++.+ .+....+..|.||||+| +. |+.+++++|++. +.+++..+..|.||||+
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~g~t~L~~A--~~-~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~ 76 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNN-VNVNAQNGFGRTALQVM--KL-GNPEIARRLLLR----GANPDLKDRTGFAVIHD 76 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSC-CCTTCCCTTSCCHHHHC--CS-SCHHHHHHHHHT----TCCTTCCCTTSCCHHHH
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCC-CCccccCccCccHHHHH--Hc-CcHHHHHHHHHc----CCCCCCCCCCCCCHHHH
Confidence 458999999999999999999987 66677788999999999 88 999999999986 78889999999999999
Q ss_pred HHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHH
Q 046373 86 AAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSE 165 (364)
Q Consensus 86 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~ 165 (364)
|+..|+.+++++|++++++ ++..+..|.||||+|+..|+.+++++|++++++.....+..|.|||++|+..|+.+
T Consensus 77 A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~ 151 (162)
T 1ihb_A 77 AARAGFLDTLQTLLEFQAD-----VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNE 151 (162)
T ss_dssp HHHHTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHcCCHHHHHHHHHcCCC-----CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHH
Confidence 9999999999999999876 78889999999999999999999999999999865688889999999999999999
Q ss_pred HHHHHHHcCCC
Q 046373 166 MVIELLENCTS 176 (364)
Q Consensus 166 ~v~~Ll~~~~~ 176 (364)
++++|+++|++
T Consensus 152 ~~~~Ll~~GAd 162 (162)
T 1ihb_A 152 VVSLMQANGAG 162 (162)
T ss_dssp HHHHHHHTC--
T ss_pred HHHHHHHhCCC
Confidence 99999999975
No 65
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=1e-31 Score=222.86 Aligned_cols=192 Identities=17% Similarity=0.134 Sum_probs=163.9
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCC
Q 046373 72 LLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYG 151 (364)
Q Consensus 72 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~ 151 (364)
.+..+..+.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|++.|++++ ..|..|
T Consensus 14 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n-~~d~~g 87 (229)
T 2vge_A 14 ARRARLNPLVLLLDAALTGELEVVQQAVKEMND-----PSQPNEEGITALHNAICGANYSIVDFLITAGANVN-SPDSHG 87 (229)
T ss_dssp CCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC-----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTC
T ss_pred ccccccchhHHHHHHHHcCCHHHHHHHHhcCCC-----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCC
Confidence 345566778899999999999999999999876 78889999999999999999999999999999976 678889
Q ss_pred chHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHH--HhcCCHHHHH
Q 046373 152 KTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLA--AGQGHARTVE 229 (364)
Q Consensus 152 ~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a--~~~~~~~~~~ 229 (364)
.||||+|+..|+.+++++|++.|++++..+. ..|.||||+| +..|+.++++
T Consensus 88 ~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~---------------------------~~g~tpL~~A~a~~~~~~~~v~ 140 (229)
T 2vge_A 88 WTPLHCAASCNDTVICMALVQHGAAIFATTL---------------------------SDGATAFEKCDPYREGYADCAT 140 (229)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCTTCCCS---------------------------STTCCTGGGCCTTSTTHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCcccccC---------------------------CCCCCHHHHHHHHhcChHHHHH
Confidence 9999999999999999999999999876541 1466777777 8889999999
Q ss_pred HHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccc--cccCCCCCCcHHHHHHhcCCcceeehhhh
Q 046373 230 TILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSL--IYEGDNNGNTPLHVLAAIRPKEFFKIKVR 303 (364)
Q Consensus 230 ~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~--i~~~d~~g~t~L~~A~~~~~~~~~~~~ll 303 (364)
+|+++|++ ++..|..|.||++.++..... +.|++. +++ ++.+|..|+||||+|++.|+.+++.-.++
T Consensus 141 ~Ll~~ga~-~~~~~~~~~~~l~~~~~~~~~---~~ll~~---ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~l 209 (229)
T 2vge_A 141 YLADVEQS-MGLMNSGAVYALWDYSAEFGD---ELSFRE---GESVTVLRRDGPEETDWWWAALHGQEGYVPRNYF 209 (229)
T ss_dssp HHHHHHHH-TTTSGGGEEEESSCBCCSSTT---BCCBCT---TCEEEEEESSCTTCSSEEEEEETTEEEEEEGGGE
T ss_pred HHHHcCCC-cccccCCchHHHHHHhhcccc---ccCccc---cccccccccCCCcccHHHHHHHcCCcceeehhhh
Confidence 99999998 577888999999876655543 445554 666 78899999999999999999888777665
No 66
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=4.5e-29 Score=196.95 Aligned_cols=160 Identities=22% Similarity=0.207 Sum_probs=142.0
Q ss_pred cCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCC
Q 046373 39 TKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKN 118 (364)
Q Consensus 39 ~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~ 118 (364)
.|.||||.| +..|+.+++++|++. +.+++..|..|.||||+|+..|+.+++++|++++++ ++..+..|.
T Consensus 2 ~~~t~L~~A--~~~g~~~~v~~ll~~----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~ 70 (167)
T 3v31_A 2 ANSLSVHQL--AAQGEMLYLATRIEQ----ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD-----PQLLGKGRE 70 (167)
T ss_dssp TTCCCHHHH--HHTTCHHHHHHHHHH----SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTCC
T ss_pred CCcchHHHH--HHCCCHHHHHHHHHc----CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-----CCCcCCCCC
Confidence 578999999 999999999999986 677889999999999999999999999999999866 677888999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhh
Q 046373 119 TALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFE 198 (364)
Q Consensus 119 t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~ 198 (364)
||||+|+..|+.+++++|++++++++ ..+..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 71 t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~---------------- 133 (167)
T 3v31_A 71 SALSLACSKGYTDIVKMLLDCGVDVN-EYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETD---------------- 133 (167)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT----------------
T ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCC-cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC----------------
Confidence 99999999999999999999999876 6788899999999999999999999999998876554
Q ss_pred cchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcc
Q 046373 199 NDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKC 238 (364)
Q Consensus 199 ~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~ 238 (364)
.|.|||++|+..|+.+++++|++++.+.
T Consensus 134 ------------~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 134 ------------SGYNSMDLAVALGYRSVQQVIESHLLKL 161 (167)
T ss_dssp ------------TSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred ------------CCCCHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 5677888888889999999999887653
No 67
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=2.1e-28 Score=193.41 Aligned_cols=157 Identities=27% Similarity=0.248 Sum_probs=108.9
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHH
Q 046373 77 AKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLY 156 (364)
Q Consensus 77 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~ 156 (364)
..+.++|+.|+..|+.++|++|++++.+ ++..+..|.||||+|+..|+.+++++|+++|+++. ..+..|.||||
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~ 85 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMANGAD-----VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVN-AVDHAGMTPLR 85 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHH
T ss_pred CcccchHHHHHHcCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHH
Confidence 3455677777777777777777777654 56666777777777777777777777777776654 55666777777
Q ss_pred HHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCC
Q 046373 157 MAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDP 236 (364)
Q Consensus 157 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~ 236 (364)
+|+..|+.+++++|++.|++++..+. .|.||||.|+..|+.+++++|+++++
T Consensus 86 ~A~~~~~~~~~~~Ll~~g~~~~~~~~----------------------------~g~t~L~~A~~~~~~~~v~~Ll~~g~ 137 (169)
T 2y1l_E 86 LAALFGHLEIVEVLLKNGADVNANDM----------------------------EGHTPLHLAAMFGHLEIVEVLLKNGA 137 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCT----------------------------TSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCC----------------------------CCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 77777777777777777776654443 35566666666677777777777777
Q ss_pred cccccccCCCCcHHHHHHHcCCHHHHHHHHhC
Q 046373 237 KCYELVDHRGWNFLHYAMVSFKLHELKILLKN 268 (364)
Q Consensus 237 ~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~ 268 (364)
+ ++.+|..|.||+|+|+..++.+++++|+++
T Consensus 138 ~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 138 D-VNAQDKFGKTAFDISIDNGNEDLAEILQKL 168 (169)
T ss_dssp C-TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred C-CCCcCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 6 466677777777777777777777777664
No 68
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=2.2e-28 Score=193.35 Aligned_cols=160 Identities=28% Similarity=0.240 Sum_probs=140.7
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHH
Q 046373 113 TNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAA 192 (364)
Q Consensus 113 ~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~ 192 (364)
....+.++|+.|+..|+.+++++|+++|.+++ ..+..|.||||+|+..|+.+++++|++.|++++..+.
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~---------- 78 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGADVN-AEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDH---------- 78 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT----------
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC----------
Confidence 34567889999999999999999999999876 6788899999999999999999999999998876554
Q ss_pred HhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccc
Q 046373 193 MHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLAR 272 (364)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~ 272 (364)
.|.||||.|+..|+.+++++|++++++ ++..|..|+||||+|+..++.+++++|+++ +
T Consensus 79 ------------------~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g 136 (169)
T 2y1l_E 79 ------------------AGMTPLRLAALFGHLEIVEVLLKNGAD-VNANDMEGHTPLHLAAMFGHLEIVEVLLKN---G 136 (169)
T ss_dssp ------------------TSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT---T
T ss_pred ------------------CCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc---C
Confidence 567788888889999999999999998 578899999999999999999999999998 8
Q ss_pred cccccCCCCCCcHHHHHHhcCCcceeehhhhcccC
Q 046373 273 SLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRYDAG 307 (364)
Q Consensus 273 ~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~~ 307 (364)
++++.+|..|.||||+|++.++ ...+.+|++.|
T Consensus 137 ~~~~~~~~~g~t~l~~A~~~~~--~~~~~~L~~~G 169 (169)
T 2y1l_E 137 ADVNAQDKFGKTAFDISIDNGN--EDLAEILQKLN 169 (169)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTC--HHHHHHHHTC-
T ss_pred CCCCCcCCCCCCHHHHHHHhCC--HHHHHHHHHcC
Confidence 9999999999999999999999 55555555544
No 69
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.96 E-value=3.9e-32 Score=240.18 Aligned_cols=234 Identities=14% Similarity=0.027 Sum_probs=114.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC--CCCCcCCchHHHH
Q 046373 80 DTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYP--YSENKYGKTSLYM 157 (364)
Q Consensus 80 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~--~~~~~~~~t~l~~ 157 (364)
.||||+|+..|+.++|++|+++++.. ......+..|.||||+|+..|+.+++++|+++|++.. ...+.. .||||+
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~--~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~ 169 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSD--EIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRL 169 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CC--SSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcH--HHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHH
Confidence 35555555555555555555554310 0011122334455555555555555555555554310 011111 555555
Q ss_pred HHhcCCHHHHHHHHHcCCCCCC--CCCCCCChHHHHH-HhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhc
Q 046373 158 AAEGRYSEMVIELLENCTSVSH--EGPNGKTALHAAA-MHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFL 234 (364)
Q Consensus 158 A~~~~~~~~v~~Ll~~~~~~~~--~~~~~~~~l~~a~-~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~ 234 (364)
|+..|+.+++++|+++|++++. .+..|.||||+|+ .....+..+.+.... ..+.|||+.|+..|+.+++++|+++
T Consensus 170 Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~g--a~~~taL~~Aa~~g~~evv~lL~~~ 247 (376)
T 2aja_A 170 AAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP--VMLAYAEIHEFEYGEKYVNPFIARH 247 (376)
T ss_dssp HHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSH--HHHHHHHHCTTTTTTTTHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCC--CccchHHHHHHHCCCHHHHHHHHhc
Confidence 5555555555555555555443 4444555555555 443333333332211 1377899999999999999999988
Q ss_pred CCcccccccCCCCcHHHHHHHcCC---------------------------HHHHHHHHhCccccccc--ccCCCCCCcH
Q 046373 235 DPKCYELVDHRGWNFLHYAMVSFK---------------------------LHELKILLKNPLARSLI--YEGDNNGNTP 285 (364)
Q Consensus 235 ~~~~~~~~d~~g~t~l~~a~~~~~---------------------------~~~~~~ll~~~~~~~~i--~~~d~~g~t~ 285 (364)
+++. +..+ ++++.|+..|+ .+.+++|++...-...+ ......+.||
T Consensus 248 ga~~-~~~~----~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~ 322 (376)
T 2aja_A 248 VNRL-KEMH----DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANEL 322 (376)
T ss_dssp HHHH-HHHH----TTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHH
T ss_pred Cccc-cccc----HHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHH
Confidence 7763 3222 12333333332 34455555431110111 1122356789
Q ss_pred HHHHHhcCCcceeehhhhcccCCcccccccCCCchhHHhhhcc
Q 046373 286 LHVLAAIRPKEFFKIKVRYDAGGNYGAVNKQNVSVTDVLIYGS 328 (364)
Q Consensus 286 L~~A~~~~~~~~~~~~ll~~~~~~~~~~n~~g~t~l~~a~~~~ 328 (364)
||+|+..|+ ...+.+|+..| .+++..|+|++++|..++
T Consensus 323 L~~A~~~g~--~e~v~lLl~~~---~v~~~~~~~~~~~~~~~~ 360 (376)
T 2aja_A 323 LRLALRLGN--QGACALLLSIP---SVLALTKANNYYINETGG 360 (376)
T ss_dssp HHHHHHHTC--TTHHHHHTTSH---HHHHSCC-----------
T ss_pred HHHHHHcCc--HHHHHHHHcCh---HHHHHHHHhccccccccc
Confidence 999999999 44555555554 467889999999984433
No 70
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=1e-28 Score=197.20 Aligned_cols=165 Identities=15% Similarity=0.110 Sum_probs=80.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHH
Q 046373 78 KGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYM 157 (364)
Q Consensus 78 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~ 157 (364)
++.++||.|+..|+.+++++|++.+.. +++..+..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~ 78 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTEN----DLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARIN-VMNRGDDTPLHL 78 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTS----CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcc----cccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-CcCCCCCCHHHH
Confidence 344555555555555555555554321 134445555555555555555555555555555433 344445555555
Q ss_pred HHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCc
Q 046373 158 AAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPK 237 (364)
Q Consensus 158 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~ 237 (364)
|+..|+.+++++|++.|++++..+. .|.||||+|+..|+.+++++|+++|++
T Consensus 79 A~~~~~~~~v~~Ll~~g~~~~~~d~----------------------------~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 130 (179)
T 3f6q_A 79 AASHGHRDIVQKLLQYKADINAVNE----------------------------HGNVPLHYACFWGQDQVAEDLVANGAL 130 (179)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCT----------------------------TSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHcCCHHHHHHHHHcCCCCCccCC----------------------------CCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 5555555555555555554443322 344455555555555555555555544
Q ss_pred ccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCC
Q 046373 238 CYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGD 279 (364)
Q Consensus 238 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d 279 (364)
++..|..|.||+++|+..++.+++++|++. +++++..+
T Consensus 131 -~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~---g~~~~~~~ 168 (179)
T 3f6q_A 131 -VSICNKYGEMPVDKAKAPLRELLRERAEKM---GQNLNRIP 168 (179)
T ss_dssp -SSBCCTTSCCGGGGSCHHHHHHHHHHHHHT---TCCCSCBC
T ss_pred -cchhccCCCCcHHHHHHHHHHHHHHHHHHh---hcCcccCC
Confidence 344455555555555555555555555554 44444433
No 71
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=4.6e-28 Score=188.24 Aligned_cols=150 Identities=23% Similarity=0.224 Sum_probs=91.8
Q ss_pred CcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHH
Q 046373 80 DTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAA 159 (364)
Q Consensus 80 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~ 159 (364)
.|||+.|+..|+.+++++|++.+.+ ++ .+..|.||||+|+..|+.+++++|++.+++++ ..+..|.||||+|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~-----~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~ 75 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAP-----FT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD-ARTKVDRTPLHMAA 75 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCC-----CC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT-CCCTTCCCHHHHHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCC-----CC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHH
Confidence 3566666666666666666666643 22 35556666666666666666666666666544 45555666666666
Q ss_pred hcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCccc
Q 046373 160 EGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKCY 239 (364)
Q Consensus 160 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~ 239 (364)
..|+.+++++|+++|++++.++. .|.||||+|+..|+.+++++|+++|++ +
T Consensus 76 ~~~~~~~v~~Ll~~g~~~~~~~~----------------------------~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~ 126 (153)
T 1awc_B 76 SEGHANIVEVLLKHGADVNAKDM----------------------------LKMTALHWATEHNHQEVVELLIKYGAD-V 126 (153)
T ss_dssp HHTCHHHHHHHHTTTCCTTCCCT----------------------------TSCCHHHHHHHTTCHHHHHHHHHTTCC-T
T ss_pred HcChHHHHHHHHHcCCCCCCCCC----------------------------CCCCHHHHHHHcCCHHHHHHHHHcCCC-c
Confidence 66666666666666666554433 344555555556666666666666665 3
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHH
Q 046373 240 ELVDHRGWNFLHYAMVSFKLHELKIL 265 (364)
Q Consensus 240 ~~~d~~g~t~l~~a~~~~~~~~~~~l 265 (364)
+.+|..|+||+|+|+..|+.+++++|
T Consensus 127 ~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 127 HTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 55566666666666666666666554
No 72
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=2.2e-28 Score=195.28 Aligned_cols=168 Identities=20% Similarity=0.188 Sum_probs=124.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhh
Q 046373 116 EKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHF 195 (364)
Q Consensus 116 ~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~ 195 (364)
.+.++|+.|+..|+.+++++|++.++......+..|.||||+|+..|+.+++++|++.|++++..+.
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~------------- 70 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNR------------- 70 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCC-------------
Confidence 4667788888888888888888775554456777788888888888888888888888877765544
Q ss_pred hhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCccccccc
Q 046373 196 YFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLI 275 (364)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i 275 (364)
.|.||||.|+..|+.+++++|++++++ ++..|..|.||||+|+..++.+++++|+++ ++++
T Consensus 71 ---------------~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~ 131 (179)
T 3f6q_A 71 ---------------GDDTPLHLAASHGHRDIVQKLLQYKAD-INAVNEHGNVPLHYACFWGQDQVAEDLVAN---GALV 131 (179)
T ss_dssp ---------------TCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCS
T ss_pred ---------------CCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCc
Confidence 456666777777788888888888777 467777888888888888888888888877 7778
Q ss_pred ccCCCCCCcHHHHHHhcCCcceeehhhhcccCCcccccccCC
Q 046373 276 YEGDNNGNTPLHVLAAIRPKEFFKIKVRYDAGGNYGAVNKQN 317 (364)
Q Consensus 276 ~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~~~~~~~~n~~g 317 (364)
+.+|..|.||||+|+..++ ...+.+|++.|++++..+..+
T Consensus 132 ~~~~~~g~tpl~~A~~~~~--~~~~~~L~~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 132 SICNKYGEMPVDKAKAPLR--ELLRERAEKMGQNLNRIPYKD 171 (179)
T ss_dssp SBCCTTSCCGGGGSCHHHH--HHHHHHHHHTTCCCSCBCCCC
T ss_pred chhccCCCCcHHHHHHHHH--HHHHHHHHHhhcCcccCCccc
Confidence 8888888888888887777 566666777777776655444
No 73
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=1.1e-29 Score=212.40 Aligned_cols=207 Identities=14% Similarity=0.031 Sum_probs=137.1
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHH
Q 046373 76 NAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSL 155 (364)
Q Consensus 76 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l 155 (364)
+..|.||||.|+..++.++++.|+++|.+ ++. +..|.||||.|+..|+.+++++|++.+++++ ..+..|.|||
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~-----~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~d~~g~t~L 74 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMR-----VKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPS-LPNDEGITAL 74 (239)
T ss_dssp -----------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCC-CCCTTSCCHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCC-----ccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHH
Confidence 34688999999999999999999999876 332 3678899999999999999999999988765 6778899999
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcC
Q 046373 156 YMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLD 235 (364)
Q Consensus 156 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~ 235 (364)
|+|+..|+.+++++|+++|++++.++. .|.||||+|+..|+.+++++|+++|
T Consensus 75 ~~A~~~g~~~~v~~Ll~~ga~~~~~d~----------------------------~g~tpL~~A~~~~~~~~v~~Ll~~g 126 (239)
T 1ycs_B 75 HNAVCAGHTEIVKFLVQFGVNVNAADS----------------------------DGWTPLHCAASCNNVQVCKFLVESG 126 (239)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCTTCCCT----------------------------TCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCC----------------------------CCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 999999999999999999988876655 4677777888888999999999999
Q ss_pred CcccccccCCCC-cHHHHH--HHcCCHHHHHHHHhCcccccccccC---------CCCCCcHHHHHHhcCCcceeehhhh
Q 046373 236 PKCYELVDHRGW-NFLHYA--MVSFKLHELKILLKNPLARSLIYEG---------DNNGNTPLHVLAAIRPKEFFKIKVR 303 (364)
Q Consensus 236 ~~~~~~~d~~g~-t~l~~a--~~~~~~~~~~~ll~~~~~~~~i~~~---------d~~g~t~L~~A~~~~~~~~~~~~ll 303 (364)
++ ++..+..|. ||+|+| +..|+.+++++|++. +++++.. +..+.++++++.+.|. ...++.
T Consensus 127 a~-~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~---~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~--~i~vl~- 199 (239)
T 1ycs_B 127 AA-VFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV---QEKMGIMNKGVIYALWDYEPQNDDELPMKEGD--CMTIIH- 199 (239)
T ss_dssp CC-TTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH---HHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC--EEEECC-
T ss_pred CC-cceecCCCCcchHHHHHHhhhccHHHHHHHHHh---hhcccccccceEEEEeccCCCCCCcccccCCC--EEEEEE-
Confidence 88 466776665 999999 778889999999987 6666554 6668899998888887 444333
Q ss_pred cccCCc------ccccccCCCchhHHhh
Q 046373 304 YDAGGN------YGAVNKQNVSVTDVLI 325 (364)
Q Consensus 304 ~~~~~~------~~~~n~~g~t~l~~a~ 325 (364)
..+.+ ....+..|.+|..|..
T Consensus 200 -~~~~~~~~Ww~~~~~~~~G~~P~~yv~ 226 (239)
T 1ycs_B 200 -REDEDEIEWWWARLNDKEGYVPRNLLG 226 (239)
T ss_dssp -CCTTSCSSEEEEEETTEEEEEEGGGEE
T ss_pred -ecCCCCCCEEEEEECCcEEEeehHHee
Confidence 33332 2356777888888873
No 74
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=4.5e-28 Score=188.30 Aligned_cols=149 Identities=21% Similarity=0.207 Sum_probs=133.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhh
Q 046373 117 KNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFY 196 (364)
Q Consensus 117 g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~ 196 (364)
..|+|+.|+..|+.+++++|++.+++.. .+..|.||||+|+..|+.+++++|++.|++++..+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-------------- 65 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT--TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTK-------------- 65 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC--CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT--------------
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC--------------
Confidence 3579999999999999999999998764 577899999999999999999999999998876554
Q ss_pred hhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccc
Q 046373 197 FENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIY 276 (364)
Q Consensus 197 ~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~ 276 (364)
.|.||||.|+..|+.+++++|++++++ ++..|..|+||||+|+..++.+++++|+++ |++++
T Consensus 66 --------------~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~ 127 (153)
T 1awc_B 66 --------------VDRTPLHMAASEGHANIVEVLLKHGAD-VNAKDMLKMTALHWATEHNHQEVVELLIKY---GADVH 127 (153)
T ss_dssp --------------TCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTT
T ss_pred --------------CCCCHHHHHHHcChHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCcc
Confidence 567788888888999999999999998 578899999999999999999999999998 89999
Q ss_pred cCCCCCCcHHHHHHhcCCcceee
Q 046373 277 EGDNNGNTPLHVLAAIRPKEFFK 299 (364)
Q Consensus 277 ~~d~~g~t~L~~A~~~~~~~~~~ 299 (364)
.+|..|.||||+|+..|+.++..
T Consensus 128 ~~~~~g~t~l~~A~~~~~~~i~~ 150 (153)
T 1awc_B 128 TQSKFCKTAFDISIDNGNEDLAE 150 (153)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHH
Confidence 99999999999999999955443
No 75
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=1.9e-28 Score=192.99 Aligned_cols=159 Identities=23% Similarity=0.195 Sum_probs=83.5
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHH
Q 046373 114 NNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAM 193 (364)
Q Consensus 114 ~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~ 193 (364)
+..|.|+||.|+..|+.+++++|++.+.......+..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~----------- 73 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDK----------- 73 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-----------
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCC-----------
Confidence 344555555555555555555555543333334444455555555555555555555555555544333
Q ss_pred hhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCccccc
Q 046373 194 HFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARS 273 (364)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~ 273 (364)
.|.||||+|+..|+.+++++|++++++ ++..|..|+||||+|+..++.+++++|+++ ++
T Consensus 74 -----------------~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga 132 (165)
T 3twr_A 74 -----------------GGLVPLHNACSYGHYEVAELLVKHGAV-VNVADLWKFTPLHEAAAKGKYEICKLLLQH---GA 132 (165)
T ss_dssp -----------------TSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHT---TC
T ss_pred -----------------CCCCHHHHHHHcCcHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHc---CC
Confidence 244444555555555555555555555 344555555555555555555555555555 55
Q ss_pred ccccCCCCCCcHHHHHHhcCCcceeehhhhcccC
Q 046373 274 LIYEGDNNGNTPLHVLAAIRPKEFFKIKVRYDAG 307 (364)
Q Consensus 274 ~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~~ 307 (364)
+++.+|..|.||||+|.+ ++ ..++.+|+++|
T Consensus 133 ~~~~~~~~g~t~l~~a~~-~~--~~i~~~L~~~g 163 (165)
T 3twr_A 133 DPTKKNRDGNTPLDLVKD-GD--TDIQDLLRGDA 163 (165)
T ss_dssp CTTCCCTTSCCTGGGSCT-TC--HHHHHHHHTC-
T ss_pred CCcccCCCCCChhHhHhc-CC--hHHHHHHhhcc
Confidence 555555555555555444 44 33444444444
No 76
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=4.5e-29 Score=196.55 Aligned_cols=161 Identities=22% Similarity=0.317 Sum_probs=137.9
Q ss_pred CCCCCChhHHHHHhcCChHHhhhccCChhHHHhhhhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCc
Q 046373 2 NPISIYPNFFNAAAAGDAETFKRNTTSDEIESLLTAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDT 81 (364)
Q Consensus 2 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t 81 (364)
......++|+.|++.|+++++++|++.++.+....+..|.||||+| +..|+.+++++|++. +.+++..|..|.|
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t 77 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFA--AGYNRVSVVEYLLQH----GADVHAKDKGGLV 77 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSCC
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHH--HHcChHHHHHHHHhc----CCCCCccCCCCCC
Confidence 3445568899999999999999999976565666677888999999 999999999999886 7888889999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhc
Q 046373 82 PLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEG 161 (364)
Q Consensus 82 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~ 161 (364)
|||+|+..|+.+++++|++++++ ++..+..|.||||+|+..|+.+++++|+++|+++. ..+..|.||+++|+.
T Consensus 78 ~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~a~~- 150 (165)
T 3twr_A 78 PLHNACSYGHYEVAELLVKHGAV-----VNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPT-KKNRDGNTPLDLVKD- 150 (165)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCTGGGSCT-
T ss_pred HHHHHHHcCcHHHHHHHHhCCCC-----CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCChhHhHhc-
Confidence 99999999999999999999866 67888899999999999999999999999998865 778889999999776
Q ss_pred CCHHHHHHHHHcCC
Q 046373 162 RYSEMVIELLENCT 175 (364)
Q Consensus 162 ~~~~~v~~Ll~~~~ 175 (364)
++.+++++|++.|+
T Consensus 151 ~~~~i~~~L~~~gA 164 (165)
T 3twr_A 151 GDTDIQDLLRGDAA 164 (165)
T ss_dssp TCHHHHHHHHTC--
T ss_pred CChHHHHHHhhccc
Confidence 88899999998874
No 77
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=1.4e-27 Score=186.10 Aligned_cols=154 Identities=22% Similarity=0.192 Sum_probs=125.0
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHH
Q 046373 79 GDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMA 158 (364)
Q Consensus 79 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A 158 (364)
+.||||.|+..|+.+++++|++... ..++..+..|.||||+ +..|+.+++++|+++|++++ ..+..|.||||+|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~----~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A 75 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHREL----VHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPN-VQDTSGTSPVHDA 75 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTC----CCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhC----cCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHH
Confidence 3578888888888888888888721 1267778888888888 88888888888888888865 6677888899988
Q ss_pred HhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcc
Q 046373 159 AEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKC 238 (364)
Q Consensus 159 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~ 238 (364)
+..|+.+++++|++.|++++..+. .|.||||.|+..|+.+++++|+++ ++
T Consensus 76 ~~~~~~~~v~~Ll~~g~~~~~~~~----------------------------~g~t~L~~A~~~~~~~~v~~Ll~~-~~- 125 (156)
T 1bd8_A 76 ARTGFLDTLKVLVEHGADVNVPDG----------------------------TGALPIHLAVQEGHTAVVSFLAAE-SD- 125 (156)
T ss_dssp HHTTCHHHHHHHHHTTCCSCCCCT----------------------------TSCCHHHHHHHHTCHHHHHHHHTT-SC-
T ss_pred HHcCcHHHHHHHHHcCCCCCCcCC----------------------------CCCcHHHHHHHhChHHHHHHHHhc-cC-
Confidence 888888888888888888776554 466777777788888888888888 55
Q ss_pred cccccCCCCcHHHHHHHcCCHHHHHHHHhC
Q 046373 239 YELVDHRGWNFLHYAMVSFKLHELKILLKN 268 (364)
Q Consensus 239 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~ 268 (364)
++..|..|.||||+|+..|+.+++++|+++
T Consensus 126 ~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 126 LHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp TTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred CCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 577888888999999988888888888875
No 78
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.95 E-value=1.9e-31 Score=235.82 Aligned_cols=261 Identities=11% Similarity=0.002 Sum_probs=163.7
Q ss_pred CChhHHHHHhcCChHHhhhccCChhHH--HhhhhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCc-----cccccCCC
Q 046373 6 IYPNFFNAAAAGDAETFKRNTTSDEIE--SLLTAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPS-----LLLQVNAK 78 (364)
Q Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~--~~~~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~-----~~~~~~~~ 78 (364)
..++||.|++.|++++|++|++.+..+ ....+..|.||||+| ++.|+.+++++|++. ++ +++..+
T Consensus 92 ~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~A--a~~G~~eiv~~Ll~~----gad~~~~~i~~~~-- 163 (376)
T 2aja_A 92 SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLA--AENGHLHVLNRLCEL----APTEIMAMIQAEN-- 163 (376)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHH--HHTTCHHHHHHHHHS----CTTTHHHHHSHHH--
T ss_pred cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHH--HHcCCHHHHHHHHhC----CCCccccccCCCC--
Confidence 347899999999999999999987211 012334677899999 999999999999885 42 233333
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhc--CCCCCCcHHHHHH-HcCCHHHHHHHHhcCCCCCCCCCcCCchHH
Q 046373 79 GDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRM--TNNEKNTALHEAV-CHGNVQVVKILTKQDPDYPYSENKYGKTSL 155 (364)
Q Consensus 79 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~--~~~~g~t~l~~a~-~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l 155 (364)
.||||+|+..|+.++|++|+++|++ ++. .+..|.||||+|+ ..|+.+++++|++.|. .|.|||
T Consensus 164 -~TpLh~Aa~~G~~eiv~~Ll~~ga~-----~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga--------~~~taL 229 (376)
T 2aja_A 164 -YHAFRLAAENGHLHVLNRLCELAPT-----EATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV--------MLAYAE 229 (376)
T ss_dssp -HHHHHHHHHTTCHHHHHHHHHSCGG-----GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH--------HHHHHH
T ss_pred -CCHHHHHHHCCCHHHHHHHHHcCCc-----cchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC--------ccchHH
Confidence 8999999999999999999999876 333 5667899999999 9999999999998653 278999
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHH---HHhcCCHHHHHHHH
Q 046373 156 YMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHL---AAGQGHARTVETIL 232 (364)
Q Consensus 156 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~---a~~~~~~~~~~~Ll 232 (364)
++|+..|+.+++++|+++|++++..+. +++.|+....++........ .+...+.. +...+..+.+++|+
T Consensus 230 ~~Aa~~g~~evv~lL~~~ga~~~~~~~----~l~~A~~~g~~~vv~~~~~~----~~~~~~~~li~~~~~~~~~~~~~Ll 301 (376)
T 2aja_A 230 IHEFEYGEKYVNPFIARHVNRLKEMHD----AFKLSNPDGVFDLVTKSECL----QGFYMLRNLIRRNDEVLLDDIRFLL 301 (376)
T ss_dssp HCTTTTTTTTHHHHHHHHHHHHHHHHT----TTTTTSSSSCCCCSSHHHHH----HHHHHHHHHHHHCCGGGHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHhcCcccccccH----HHHHHHHCCChhhhcHHhhh----hhHHHHHHHHHcchhhHHHHHHHHH
Confidence 999999999999999998876543321 23333322222211100000 00001111 11233567788888
Q ss_pred hcCCccc----ccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCCcceeehhh
Q 046373 233 FLDPKCY----ELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRPKEFFKIKV 302 (364)
Q Consensus 233 ~~~~~~~----~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~l 302 (364)
+.+.... ......+.||||+|+..|+.+++++|++. + ..++..|.|++.+|.+.|..++..+-+
T Consensus 302 ~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~---~---~v~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (376)
T 2aja_A 302 SIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSI---P---SVLALTKANNYYINETGGRLDLRAVAL 369 (376)
T ss_dssp TSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTS---H---HHHHSCC--------------------
T ss_pred hChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcC---h---HHHHHHHHhccccccccccccHHHHHH
Confidence 7543110 11223567899999999999999999986 2 446778999999999999976665543
No 79
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=1.8e-28 Score=205.08 Aligned_cols=184 Identities=14% Similarity=0.113 Sum_probs=129.9
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHH
Q 046373 114 NNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAM 193 (364)
Q Consensus 114 ~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~ 193 (364)
+..|.||||.|+..++.+.++.|+++|.++.. +..+.||||+|+..|+.+++++|++.|++++.++.
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~--~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~----------- 68 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKF--NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPND----------- 68 (239)
T ss_dssp -------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCT-----------
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCccc--CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-----------
Confidence 34689999999999999999999999998763 46689999999999999999999999999887665
Q ss_pred hhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCccccc
Q 046373 194 HFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARS 273 (364)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~ 273 (364)
.|.||||+|+..|+.+++++|++++++ ++..|..|+||||+|+..|+.+++++|+++ ++
T Consensus 69 -----------------~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~---ga 127 (239)
T 1ycs_B 69 -----------------EGITALHNAVCAGHTEIVKFLVQFGVN-VNAADSDGWTPLHCAASCNNVQVCKFLVES---GA 127 (239)
T ss_dssp -----------------TSCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHT---TC
T ss_pred -----------------CCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHc---CC
Confidence 577788888889999999999999998 588999999999999999999999999998 99
Q ss_pred ccccCCCCCC-cHHHHH--HhcCCcceeehhhhcccCCccccc---------ccCCCchhHHhhhcccceee
Q 046373 274 LIYEGDNNGN-TPLHVL--AAIRPKEFFKIKVRYDAGGNYGAV---------NKQNVSVTDVLIYGSRELTL 333 (364)
Q Consensus 274 ~i~~~d~~g~-t~L~~A--~~~~~~~~~~~~ll~~~~~~~~~~---------n~~g~t~l~~a~~~~~~~~~ 333 (364)
+++.++..|. ||||+| +..|+ ..++.+|+++|++++.. +..+.++.+++...+..+.+
T Consensus 128 ~~~~~~~~~~~t~l~~a~~~~~g~--~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~~i~v 197 (239)
T 1ycs_B 128 AVFAMTYSDMQTAADKCEEMEEGY--TQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGDCMTI 197 (239)
T ss_dssp CTTCCCSSSCCCHHHHCCSSSTTC--CCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSCEEEE
T ss_pred CcceecCCCCcchHHHHHHhhhcc--HHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCCEEEE
Confidence 9999998877 999999 77788 66777788888887665 55678888888666665543
No 80
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=2.9e-27 Score=184.35 Aligned_cols=154 Identities=17% Similarity=0.201 Sum_probs=136.1
Q ss_pred CCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCc
Q 046373 40 KNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNT 119 (364)
Q Consensus 40 g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t 119 (364)
+.|+||+| +..|+.+++++|++. .+.+++..+..|.||||+ +..|+.+++++|++.|++ ++..+..|.|
T Consensus 2 ~~~~L~~A--~~~g~~~~v~~ll~~---~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t 70 (156)
T 1bd8_A 2 AGDRLSGA--AARGDVQEVRRLLHR---ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGAS-----PNVQDTSGTS 70 (156)
T ss_dssp HHHHHHHH--HHHTCHHHHHHHHHT---TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC-----TTCCCTTSCC
T ss_pred cchHHHHH--HHhCCHHHHHHHHHh---hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC-----CCCcCCCCCC
Confidence 46899999 999999999999883 345788889999999999 999999999999999876 6888999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhc
Q 046373 120 ALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFEN 199 (364)
Q Consensus 120 ~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~ 199 (364)
|||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|++. ++++..+.
T Consensus 71 ~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~----------------- 131 (156)
T 1bd8_A 71 PVHDAARTGFLDTLKVLVEHGADVN-VPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDA----------------- 131 (156)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCT-----------------
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCCC-CcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCC-----------------
Confidence 9999999999999999999998866 6788899999999999999999999998 77765554
Q ss_pred chhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhc
Q 046373 200 DQTAADIADKDRKMTALHLAAGQGHARTVETILFL 234 (364)
Q Consensus 200 ~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~ 234 (364)
.|.||||+|+..|+.+++++|+++
T Consensus 132 -----------~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 132 -----------RGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp -----------TSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred -----------CCCCHHHHHHHcCcHHHHHHHHhh
Confidence 577888888889999999999875
No 81
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=6.8e-26 Score=172.22 Aligned_cols=134 Identities=16% Similarity=0.124 Sum_probs=113.9
Q ss_pred CccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCC
Q 046373 69 PSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSEN 148 (364)
Q Consensus 69 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~ 148 (364)
+.+++..+..|.||||+|+..|+.+++++|++++++ ++..+..|.||||+|+. ++.+++++|++++++++ ..+
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~-~~~ 74 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGAD-----PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPN-CAD 74 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSS-CCB
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC-----cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCC-CcC
Confidence 456788888999999999999999999999998865 67788899999999999 99999999999998866 666
Q ss_pred cC-CchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHH
Q 046373 149 KY-GKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHART 227 (364)
Q Consensus 149 ~~-~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~ 227 (364)
.. |.||||+|+..|+.+++++|++.|++++.++. .|.||||+|+..++.++
T Consensus 75 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~----------------------------~g~tpl~~A~~~~~~~~ 126 (136)
T 1d9s_A 75 PATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDA----------------------------WGRLPVDLAEEQGHRDI 126 (136)
T ss_dssp TTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSS----------------------------SSSCHHHHHHHHTCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC----------------------------CCCCHHHHHHHcCCHHH
Confidence 77 89999999999999999999999988876655 56677777888888999
Q ss_pred HHHHHhcCCc
Q 046373 228 VETILFLDPK 237 (364)
Q Consensus 228 ~~~Ll~~~~~ 237 (364)
+++|+++|++
T Consensus 127 ~~~Ll~~Gad 136 (136)
T 1d9s_A 127 ARYLHAATGD 136 (136)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHcCCC
Confidence 9999988764
No 82
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=3.3e-26 Score=182.97 Aligned_cols=158 Identities=16% Similarity=0.110 Sum_probs=117.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCC-CCCCcHHHHHHHcCCH----HHHHHHHhcCCCCCCCCCcCCch
Q 046373 79 GDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTN-NEKNTALHEAVCHGNV----QVVKILTKQDPDYPYSENKYGKT 153 (364)
Q Consensus 79 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~-~~g~t~l~~a~~~~~~----e~v~~Ll~~~~~~~~~~~~~~~t 153 (364)
++++|+.|+..|+.+.++.++..+. +..+ ..|.||||+|+..++. +++++|+++|++++ ..+..|.|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~-------~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn-~~d~~g~T 77 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY-------EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIK-SRTKEGTT 77 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS-------SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSS-CCCTTCCC
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc-------ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCC-CCCCCCCc
Confidence 4578888888888888888887663 2333 5688888888888864 48888888888866 66778888
Q ss_pred HHHHHHhcCC------HHHHHHHHHcCCCCCCCCCCCC-ChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHH
Q 046373 154 SLYMAAEGRY------SEMVIELLENCTSVSHEGPNGK-TALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHAR 226 (364)
Q Consensus 154 ~l~~A~~~~~------~~~v~~Ll~~~~~~~~~~~~~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~ 226 (364)
|||+|+..++ .+++++|+++|++++.++..|. ||||+|+.. +.+ ..+..+
T Consensus 78 pLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~-----------------~~~------~~~~~~ 134 (186)
T 3t8k_A 78 LFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNY-----------------FVD------ENEMIP 134 (186)
T ss_dssp THHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGC-----------------CSC------HHHHHH
T ss_pred HHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHc-----------------CCC------hhhHHH
Confidence 8888888776 5778888888888888877766 666665421 000 012346
Q ss_pred HHHHHHh-cCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhC
Q 046373 227 TVETILF-LDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKN 268 (364)
Q Consensus 227 ~~~~Ll~-~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~ 268 (364)
++++|++ +|++ ++.+|..|+||||+|+..++.++++.|.+.
T Consensus 135 iv~~Ll~~~gad-~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 135 LYKLIFSQSGLQ-LLIKDKWGLTALEFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp HHHHHHTSTTCC-TTCCCTTSCCHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHhcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 7888888 7887 577888888888888888888888888875
No 83
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=1.2e-25 Score=175.15 Aligned_cols=141 Identities=16% Similarity=0.128 Sum_probs=74.3
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHH
Q 046373 113 TNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAA 192 (364)
Q Consensus 113 ~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~ 192 (364)
.+..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+ .|+.+++++|++.|++++.++.
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~---------- 75 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEAGANPN-APNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADP---------- 75 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTTTCCTT-CCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCT----------
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCC----------
Confidence 34556666666666666666666666665544 44555666666653 5666666666666666554443
Q ss_pred HhhhhhcchhhhhhhccCCCch-HHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCccc
Q 046373 193 MHFYFENDQTAADIADKDRKMT-ALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLA 271 (364)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~t-~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~ 271 (364)
.|.| |||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..++.+++++|+++
T Consensus 76 ------------------~g~ttpL~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~--- 133 (156)
T 1bi7_B 76 ------------------ATLTRPVHDAAREGFLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRAA--- 133 (156)
T ss_dssp ------------------TTCCCHHHHHHHHTCHHHHHHHHHHTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHSSC---
T ss_pred ------------------CCCcHHHHHHHHCCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHhCHHHHHHHHHHc---
Confidence 2333 55555555666666666666665 355566666666666666666666666665
Q ss_pred ccccccCCCCCCcHHH
Q 046373 272 RSLIYEGDNNGNTPLH 287 (364)
Q Consensus 272 ~~~i~~~d~~g~t~L~ 287 (364)
|++++.++..|.||.+
T Consensus 134 ga~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 134 AGGTRGSNHARIDAAE 149 (156)
T ss_dssp C---------------
T ss_pred CCCCCccCcCcCcccc
Confidence 6666666666666654
No 84
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.92 E-value=9.5e-26 Score=175.65 Aligned_cols=144 Identities=18% Similarity=0.115 Sum_probs=112.6
Q ss_pred CCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCH
Q 046373 146 SENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHA 225 (364)
Q Consensus 146 ~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~ 225 (364)
..+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+ .|+.
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~----------------------------g~t~L~~A~-~~~~ 57 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSY----------------------------GRRPIQVMM-MGSA 57 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSS----------------------------SCCTTTSSC-TTCH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC----------------------------CCCHHHHHH-cCCH
Confidence 45667899999999999999999999999998876664 556666664 7899
Q ss_pred HHHHHHHhcCCcccccccCCCCc-HHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCCcceeehhhhc
Q 046373 226 RTVETILFLDPKCYELVDHRGWN-FLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRY 304 (364)
Q Consensus 226 ~~~~~Ll~~~~~~~~~~d~~g~t-~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~ 304 (364)
+++++|++++++ ++.+|..|+| |||+|+..|+.+++++|+++ +++++.+|..|.||||+|+..++ ...+.+|+
T Consensus 58 ~~v~~Ll~~g~~-~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~---ga~~~~~d~~g~tpl~~A~~~~~--~~~v~~Ll 131 (156)
T 1bi7_B 58 RVAELLLLHGAE-PNCADPATLTRPVHDAAREGFLDTLVVLHRA---GARLDVRDAWGRLPVDLAEELGH--RDVARYLR 131 (156)
T ss_dssp HHHHHHHTTTCC-CCCCCTTTCCCHHHHHHHHTCHHHHHHHHHH---TCCSSCCCTTCCCHHHHHHHHTC--HHHHHHHS
T ss_pred HHHHHHHHcCCC-CCCcCCCCCcHHHHHHHHCCCHHHHHHHHHc---CCCCcccCCCCCCHHHHHHHhCH--HHHHHHHH
Confidence 999999999988 5889999999 99999999999999999998 99999999999999999999999 77778888
Q ss_pred ccCCcccccccCCCchhHHh
Q 046373 305 DAGGNYGAVNKQNVSVTDVL 324 (364)
Q Consensus 305 ~~~~~~~~~n~~g~t~l~~a 324 (364)
++|++++.+|..|.||.+-+
T Consensus 132 ~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 132 AAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp SCC-----------------
T ss_pred HcCCCCCccCcCcCcccccC
Confidence 99999999999999998744
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=1.3e-26 Score=185.27 Aligned_cols=159 Identities=13% Similarity=0.095 Sum_probs=135.7
Q ss_pred CChhHHHHHhcCChHHhhhccCChhHHHhhhhccCCchHHHHHHHHHhcC----CChHHHHHHHhcCCccccccCCCCCc
Q 046373 6 IYPNFFNAAAAGDAETFKRNTTSDEIESLLTAQTKNTILHINIISQKRKN----GSTKFIGEMLKKCPSLLLQVNAKGDT 81 (364)
Q Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~----~~~~~l~~~l~~~~~~~~~~~~~g~t 81 (364)
.+++|+.|++.|+++.++.+++.+ .+. ..+..|.||||+| +..++. +++++|++. +++++..|..|+|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~-~~~-~~~~~g~T~Lh~A--~~~~~~~~~~~iv~~Ll~~----Gadvn~~d~~g~T 77 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKG-YED-KESVLKSNILYDV--LRNNNDEARYKISMFLINK----GADIKSRTKEGTT 77 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHS-SSC-HHHHHTTTHHHHH--TTCSCHHHHHHHHHHHHHT----TCCSSCCCTTCCC
T ss_pred cccHHHHHHHcCCHHHHHHHHhcC-ccc-ccccCCCCHHHHH--HHcCCcchHHHHHHHHHHC----CCCCCCCCCCCCc
Confidence 457899999999999999998876 322 3336899999999 988864 478888876 8999999999999
Q ss_pred HHHHHHHcCC------HHHHHHHHHHhhHHHhHhhhcCCCCCC-cHHHHHHHcC-----CHHHHHHHHh-cCCCCCCCCC
Q 046373 82 PLHLAAKFGH------SNIVSFLIERAKLAAWQMMRMTNNEKN-TALHEAVCHG-----NVQVVKILTK-QDPDYPYSEN 148 (364)
Q Consensus 82 ~L~~A~~~~~------~~~v~~Ll~~~~~~~~~~~~~~~~~g~-t~l~~a~~~~-----~~e~v~~Ll~-~~~~~~~~~~ 148 (364)
|||+|+..++ .+++++|+++|++ ++.+|..|. ||||+|+..+ +.+++++|++ +|++++ ..|
T Consensus 78 pLh~a~~~~~~~~~~~~~iv~~Ll~~Gad-----in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~-~~d 151 (186)
T 3t8k_A 78 LFFPLFQGGGNDITGTTELCKIFLEKGAD-----ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLL-IKD 151 (186)
T ss_dssp THHHHHHHCTTCHHHHHHHHHHHHHTTCC-----SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTT-CCC
T ss_pred HHHHHHHcCCcchhhHHHHHHHHHHCCCC-----CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCc-ccC
Confidence 9999999987 5789999999977 788999999 9999999854 4579999999 899976 788
Q ss_pred cCCchHHHHHHhcCCHHHHHHHHHcCCCCC
Q 046373 149 KYGKTSLYMAAEGRYSEMVIELLENCTSVS 178 (364)
Q Consensus 149 ~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~ 178 (364)
..|.||||+|+..++.+++++|.+.....+
T Consensus 152 ~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~ 181 (186)
T 3t8k_A 152 KWGLTALEFVKRCQKPIALKMMEDYIKKYN 181 (186)
T ss_dssp TTSCCHHHHHHTTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 899999999999999999999988654333
No 86
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.92 E-value=6.4e-26 Score=172.35 Aligned_cols=130 Identities=12% Similarity=0.175 Sum_probs=120.6
Q ss_pred hhhhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcC
Q 046373 34 LLTAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMT 113 (364)
Q Consensus 34 ~~~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 113 (364)
...+..|.||||+| +..|+.+++++|++. +.+++..|..|.||||+|+. |+.+++++|++++++ ++..
T Consensus 6 ~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-----~~~~ 73 (136)
T 1d9s_A 6 HMLGGSSDAGLATA--AARGQVETVRQLLEA----GADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE-----PNCA 73 (136)
T ss_dssp SCCCCCCSCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-----SSCC
T ss_pred cCCCCCCccHHHHH--HHcCCHHHHHHHHHc----CCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-----CCCc
Confidence 35566899999999 999999999999986 78899999999999999999 999999999999976 7888
Q ss_pred CCC-CCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCC
Q 046373 114 NNE-KNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTS 176 (364)
Q Consensus 114 ~~~-g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~ 176 (364)
+.. |.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..++.+++++|+++|++
T Consensus 74 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 74 DPATLTRPVHDAAREGFLDTLVVLHRAGARLD-VCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp BTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCC-CCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 888 9999999999999999999999999976 7788999999999999999999999999875
No 87
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=2.7e-24 Score=160.98 Aligned_cols=126 Identities=31% Similarity=0.410 Sum_probs=117.6
Q ss_pred cCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCC
Q 046373 39 TKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKN 118 (364)
Q Consensus 39 ~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~ 118 (364)
+|.||||+| +..|+.+++++|++. +.+++..+..|.||||+|+..++.+++++|++.+.+ ++..+..|.
T Consensus 1 ~g~t~L~~A--~~~~~~~~v~~Ll~~----~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~~~~~~g~ 69 (126)
T 1n0r_A 1 NGRTPLHLA--ARNGHLEVVKLLLEA----GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-----VNAKDKNGR 69 (126)
T ss_dssp CCCCHHHHH--HHHTCHHHHHHHHHH----TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSC
T ss_pred CCccHHHHH--HHcCcHHHHHHHHHc----CCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-----CcccCCCCC
Confidence 589999999 999999999999996 778888999999999999999999999999999876 678889999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCC
Q 046373 119 TALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTS 176 (364)
Q Consensus 119 t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~ 176 (364)
||||+|+..++.+++++|+++|+++. ..+..|.|||++|+..++.+++++|+++|++
T Consensus 70 t~l~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 70 TPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred cHHHHHHHcChHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999999999866 7788899999999999999999999999975
No 88
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=1.3e-23 Score=157.33 Aligned_cols=126 Identities=36% Similarity=0.487 Sum_probs=114.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHH
Q 046373 78 KGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYM 157 (364)
Q Consensus 78 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~ 157 (364)
+|.||||+|+..|+.+++++|++++.+ ++..+..|.||||+|+..++.+++++|+++++++. ..+..|.||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~-----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~l~~ 74 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-----VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHL 74 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC-----TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC-----CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCc-ccCCCCCcHHHH
Confidence 589999999999999999999999865 67789999999999999999999999999999866 677889999999
Q ss_pred HHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCc
Q 046373 158 AAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPK 237 (364)
Q Consensus 158 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~ 237 (364)
|+..++.+++++|++.|++++.++. .|.|||+.|+..|+.+++++|+++|++
T Consensus 75 A~~~~~~~~~~~Ll~~g~~~~~~~~----------------------------~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 75 AARNGHLEVVKLLLEAGADVNAKDK----------------------------NGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCT----------------------------TSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHcChHHHHHHHHHcCCCCcccCC----------------------------CCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999999999999876554 577888888889999999999999875
No 89
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=2.4e-24 Score=163.58 Aligned_cols=128 Identities=20% Similarity=0.254 Sum_probs=115.2
Q ss_pred hhhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCC
Q 046373 35 LTAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTN 114 (364)
Q Consensus 35 ~~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 114 (364)
.....+.||||+| +..|+.+++++|++. +.+++..|..|.||||+|+..|+.+++++|++++++ ++..+
T Consensus 9 ~~~~~~~t~l~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~d 77 (136)
T 2jab_A 9 HHGSDLGKKLLEA--ARAGQDDEVRILMAN----GADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD-----VNAVD 77 (136)
T ss_dssp ---CHHHHHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCC
T ss_pred cccccccHHHHHH--HHhCCHHHHHHHHHc----CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCcCC
Confidence 3445788999999 999999999999986 788899999999999999999999999999999876 77889
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcC
Q 046373 115 NEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENC 174 (364)
Q Consensus 115 ~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~ 174 (364)
..|.||||+|+..|+.+++++|+++|+++. ..+..|.|||++|+..++.+++++|++.|
T Consensus 78 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 78 AIGFTPLHLAAFIGHLEIAEVLLKHGADVN-AQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-CcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999999999999865 77888999999999999999999999876
No 90
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=9.3e-24 Score=160.35 Aligned_cols=127 Identities=24% Similarity=0.259 Sum_probs=113.2
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchH
Q 046373 75 VNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTS 154 (364)
Q Consensus 75 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~ 154 (364)
....+.||||+|+..|+.+++++|++++.+ ++..+..|.||||+|+..|+.+++++|++++++++ ..+..|.||
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~t~ 83 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGAD-----VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVN-AVDAIGFTP 83 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTCCCH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCC-----CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCCH
Confidence 345678999999999999999999999876 78889999999999999999999999999999876 678889999
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhc
Q 046373 155 LYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFL 234 (364)
Q Consensus 155 l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~ 234 (364)
||+|+..++.+++++|+++|++++..+. .|.||||+|+..|+.+++++|+++
T Consensus 84 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~----------------------------~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 84 LHLAAFIGHLEIAEVLLKHGADVNAQDK----------------------------FGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCT----------------------------TSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcCcCC----------------------------CCCCHHHHHHHCCCHHHHHHHHHc
Confidence 9999999999999999999999876554 577888888889999999999986
Q ss_pred C
Q 046373 235 D 235 (364)
Q Consensus 235 ~ 235 (364)
|
T Consensus 136 G 136 (136)
T 2jab_A 136 N 136 (136)
T ss_dssp -
T ss_pred C
Confidence 5
No 91
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=3.5e-24 Score=171.34 Aligned_cols=141 Identities=23% Similarity=0.215 Sum_probs=122.6
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHH
Q 046373 76 NAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSL 155 (364)
Q Consensus 76 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l 155 (364)
+..|.||||+|+..|+.+++++|++ +.+ ++..+..|.||||+|+..|+.+++++|+++|++++...+..|.|||
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-----~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL 114 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRD-----VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTAL 114 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSC-----TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCC-----CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHH
Confidence 4467899999999999999999999 654 7888999999999999999999999999999998744448899999
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhc
Q 046373 156 YMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFL 234 (364)
Q Consensus 156 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~ 234 (364)
|+|+..|+.+++++|+++|++++.++..|.||||+|+.. .......++|+.|+..|..+++++|.++
T Consensus 115 ~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~------------~~~~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 115 HMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREI------------LKTTPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp HHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH------------HHTCCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHh------------ccCcccccHHHHHHHcCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999863 2223567888888888888888888754
No 92
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.90 E-value=1.1e-23 Score=176.47 Aligned_cols=142 Identities=23% Similarity=0.207 Sum_probs=121.8
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHH
Q 046373 76 NAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSL 155 (364)
Q Consensus 76 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l 155 (364)
+..|.||||+|+..|+.+++++|++ +.+ ++..+..|.||||+|+..|+.+++++|+++|++++...+..|.|||
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-----~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L 115 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRD-----VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTAL 115 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCC-----TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCC-----CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHH
Confidence 3467899999999999999999999 654 7888999999999999999999999999999998755548899999
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcC
Q 046373 156 YMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLD 235 (364)
Q Consensus 156 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~ 235 (364)
|+|+..|+.+++++|+++|++++.++..|.||||+|+.. .....+.+||++|+..|+.+++++|+++.
T Consensus 116 ~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~------------~~~~~~~~~l~~a~~~g~~~iv~~L~~~~ 183 (244)
T 3ui2_A 116 HMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREI------------LKTTPKGNPMQFGRRIGLEKVINVLEGQV 183 (244)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH------------HTTCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHH------------HhccCCCCHHHHHHHcChHHHHHHHHHhc
Confidence 999999999999999999999999999999999998752 22245677888888878888887777653
No 93
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.88 E-value=4.6e-23 Score=156.76 Aligned_cols=78 Identities=22% Similarity=0.148 Sum_probs=35.5
Q ss_pred chHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhc
Q 046373 213 MTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAI 292 (364)
Q Consensus 213 ~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~ 292 (364)
.||||+|+..|+.+++++|++++++ ++..|..|+||||+|+..++.+++++|++. +++++.+|..|.||||+|+..
T Consensus 44 ~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~tpl~~A~~~ 119 (137)
T 3c5r_A 44 WTPLHEACNHGHLKVVELLLQHKAL-VNTTGYQNDSPLHDAAKNGHVDIVKLLLSY---GASRNAVNIFGLRPVDYTDDE 119 (137)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCGGGCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCGGGGCCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCc-ccCcCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCCCCCCCCCHHHHHhhc
Confidence 3334444444444444444444444 233444444444444444444444444444 444444444444444444444
Q ss_pred CC
Q 046373 293 RP 294 (364)
Q Consensus 293 ~~ 294 (364)
+.
T Consensus 120 ~~ 121 (137)
T 3c5r_A 120 SM 121 (137)
T ss_dssp HH
T ss_pred cH
Confidence 33
No 94
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.88 E-value=1.9e-22 Score=153.32 Aligned_cols=114 Identities=24% Similarity=0.263 Sum_probs=96.2
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCch
Q 046373 74 QVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKT 153 (364)
Q Consensus 74 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t 153 (364)
..|..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|++++.+++ ..+..|.|
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t 78 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSD-----PNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVN-TTGYQNDS 78 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-----SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCGGGCC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCccc-CcCCCCCC
Confidence 5677889999999999999999999988865 67788889999999999999999999998888865 67778889
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHH
Q 046373 154 SLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAM 193 (364)
Q Consensus 154 ~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~ 193 (364)
|||+|+..++.+++++|++.|++++.++..|.||+++|+.
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~ 118 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDD 118 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhh
Confidence 9999999999999999999998888888777777766554
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=2.6e-22 Score=172.86 Aligned_cols=138 Identities=21% Similarity=0.132 Sum_probs=89.8
Q ss_pred CchHHHHHHhcCCHHHHHHHHHcCCCCCC------CCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhc--
Q 046373 151 GKTSLYMAAEGRYSEMVIELLENCTSVSH------EGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQ-- 222 (364)
Q Consensus 151 ~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~------~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~-- 222 (364)
..++|+.|+..|+.+.++.|++.|++++. .+. .|.||||+|+..
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~----------------------------~g~t~Lh~A~~~~~ 202 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQA----------------------------PEELVLHLAVKVAN 202 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCS----------------------------CEECHHHHHHHTCC
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCC----------------------------CCccHHHHHHHhcc
Confidence 45677777777777777777777777665 233 344555555544
Q ss_pred -CCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCCcceeehh
Q 046373 223 -GHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRPKEFFKIK 301 (364)
Q Consensus 223 -~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ 301 (364)
++.+++++|+++|++ ++..|..|+||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..++ ..++.
T Consensus 203 ~~~~~iv~~Ll~~gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~---gad~~~~d~~G~TpL~~A~~~~~--~~iv~ 276 (301)
T 2b0o_E 203 QASLPLVDFIIQNGGH-LDAKAADGNTALHYAALYNQPDCLKLLLKG---RALVGTVNEAGETALDIARKKHH--KECEE 276 (301)
T ss_dssp TTTHHHHHHHHHHSSC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHT---TCCCSCCCTTSCCHHHHHHHHTC--HHHHH
T ss_pred cCcHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCCCHHHHHHHcCC--HHHHH
Confidence 667777777777776 466677777777777777777777777776 67777777777777777777777 44555
Q ss_pred hhcccCCcccccccCCCchhHHhhhcc
Q 046373 302 VRYDAGGNYGAVNKQNVSVTDVLIYGS 328 (364)
Q Consensus 302 ll~~~~~~~~~~n~~g~t~l~~a~~~~ 328 (364)
+|+++|++ .|.||||+|+..+
T Consensus 277 ~Ll~~ga~------~g~tpLh~A~~~g 297 (301)
T 2b0o_E 277 LLEQAQAG------TFAFPLHVDYSWV 297 (301)
T ss_dssp HHHHHHHH------TTSSCCC------
T ss_pred HHHHhcCC------CCCChhHHHHhcC
Confidence 55566665 3677777775443
No 96
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.87 E-value=6.6e-22 Score=147.30 Aligned_cols=111 Identities=23% Similarity=0.228 Sum_probs=97.1
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHH
Q 046373 76 NAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSL 155 (364)
Q Consensus 76 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l 155 (364)
+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++++++++ ..+..|.|||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~tpL 77 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGED-----VNRTLEGGRKPLHYAADCGQLEILEFLLLKGADIN-APDKHHITPL 77 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCC-----TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTT-CCCTTSCCHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCC-----cCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCCHH
Confidence 45678999999999999999999998865 67888899999999999999999999999998866 6778899999
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHH
Q 046373 156 YMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAA 192 (364)
Q Consensus 156 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~ 192 (364)
|+|+..++.+++++|+++|++++.++..|.||+++|.
T Consensus 78 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 78 LSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhC
Confidence 9999999999999999999999998888888888764
No 97
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.87 E-value=3.7e-22 Score=171.91 Aligned_cols=144 Identities=17% Similarity=0.099 Sum_probs=118.5
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCC-----CCcCCchHHHHHHhc---CCHHHHHHHHHcCCCCCCCCCCC
Q 046373 113 TNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYS-----ENKYGKTSLYMAAEG---RYSEMVIELLENCTSVSHEGPNG 184 (364)
Q Consensus 113 ~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~-----~~~~~~t~l~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~~ 184 (364)
......++|+.|+..|+.+.++.|++.+++++.. .+..|.||||+|+.. ++.+++++|+++|++++.++.
T Consensus 147 ~~~~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~-- 224 (301)
T 2b0o_E 147 RCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAA-- 224 (301)
T ss_dssp CCC-CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCT--
T ss_pred ccCchHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCC--
Confidence 4455678999999999999999999999987643 577899999999987 889999999999999886655
Q ss_pred CChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHH
Q 046373 185 KTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKI 264 (364)
Q Consensus 185 ~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ 264 (364)
.|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..++.+++++
T Consensus 225 --------------------------~G~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~~~~~iv~~ 277 (301)
T 2b0o_E 225 --------------------------DGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEEL 277 (301)
T ss_dssp --------------------------TCCCHHHHHHHTTCHHHHHHHHHTTCC-CSCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred --------------------------CCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 577788888888999999999999998 58899999999999999999999999
Q ss_pred HHhCcccccccccCCCCCCcHHHHHHhcCC
Q 046373 265 LLKNPLARSLIYEGDNNGNTPLHVLAAIRP 294 (364)
Q Consensus 265 ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~ 294 (364)
|++. +++ .|.||||+|+.+|+
T Consensus 278 Ll~~---ga~------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 278 LEQA---QAG------TFAFPLHVDYSWVI 298 (301)
T ss_dssp HHHH---HHH------TTSSCCC-------
T ss_pred HHHh---cCC------CCCChhHHHHhcCC
Confidence 9987 665 48899999999887
No 98
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.87 E-value=7.5e-22 Score=147.01 Aligned_cols=109 Identities=17% Similarity=0.096 Sum_probs=102.3
Q ss_pred CCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHH
Q 046373 211 RKMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLA 290 (364)
Q Consensus 211 ~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~ 290 (364)
.+.||||.|+..|+.+++++|++.+.+ ++..|..|+||||+|+..++.+++++|++. +++++.+|..|.||||+|+
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGED-VNRTLEGGRKPLHYAADCGQLEILEFLLLK---GADINAPDKHHITPLLSAV 81 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCC-TTSCCTTSSCHHHHHHHTTCHHHHHHHHTT---TCCTTCCCTTSCCHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCC-cCccCCCCCcHHHHHHHcCCHHHHHHHHHc---CCCCCcCCCCCCCHHHHHH
Confidence 578999999999999999999999988 588899999999999999999999999998 8999999999999999999
Q ss_pred hcCCcceeehhhhcccCCcccccccCCCchhHHhh
Q 046373 291 AIRPKEFFKIKVRYDAGGNYGAVNKQNVSVTDVLI 325 (364)
Q Consensus 291 ~~~~~~~~~~~ll~~~~~~~~~~n~~g~t~l~~a~ 325 (364)
..++ ...+.+|+++|++++.+|..|+||+|+|.
T Consensus 82 ~~~~--~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 82 YEGH--VSCVKLLLSKGADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HHTC--HHHHHHHHHTTCCTTCCCTTSCCHHHHCC
T ss_pred HcCC--HHHHHHHHHcCCCCCCcCCCCCCHHHHhC
Confidence 9999 66777888899999999999999999994
No 99
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.86 E-value=2e-22 Score=166.38 Aligned_cols=125 Identities=23% Similarity=0.206 Sum_probs=76.0
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHc-CCCCCCCCCCCCChHHHHH
Q 046373 114 NNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLEN-CTSVSHEGPNGKTALHAAA 192 (364)
Q Consensus 114 ~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~l~~a~ 192 (364)
+..|.||||+|+..|+.+++++|++.+++++ ..+..|.||||+|+..|+.+++++|++. |++++.++.
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~---------- 138 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVN-GLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNK---------- 138 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCT----------
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCC----------
Confidence 5566667777766666666666666666644 4555666666666666666666666666 666554433
Q ss_pred HhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhC
Q 046373 193 MHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKN 268 (364)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~ 268 (364)
.|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..+..++++.+++.
T Consensus 139 ------------------~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~ 195 (222)
T 3ehr_A 139 ------------------LGDTALHAAAWKGYADIVQLLLAKGAR-TDLRNIEKKLAFDMATNAACASLLKKKQGT 195 (222)
T ss_dssp ------------------TSCCHHHHHHHHTCHHHHHHHHHHTCC-SCCCCTTSCCHHHHCCSHHHHHHHC-----
T ss_pred ------------------CCCCHHHHHHHcCCHHHHHHHHHcCCC-CccccCCCCCHHHHhcchhHHHHHHHHhcc
Confidence 455666666666666666666666665 355666666666666666666666665554
No 100
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.86 E-value=9.6e-23 Score=168.32 Aligned_cols=165 Identities=16% Similarity=0.112 Sum_probs=121.6
Q ss_pred hhHHHHHhcCChHHhhhccCChh--------------HHHhhhhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCcccc
Q 046373 8 PNFFNAAAAGDAETFKRNTTSDE--------------IESLLTAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLL 73 (364)
Q Consensus 8 ~~l~~A~~~g~~~~v~~ll~~~~--------------~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~ 73 (364)
++...+++.|++..+..+.+.+- ......+..|.||||+| +..|+.+++++|++. +.+++
T Consensus 27 ~~~el~~~~Gd~~~v~~~~~~~w~~~~~~g~~gl~p~~~v~~~~~~g~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~ 100 (222)
T 3ehr_A 27 TPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQAESIDNPLHEA--AKRGNLSWLRECLDN----RVGVN 100 (222)
T ss_dssp STTBCCCCTTCEEEEEECCSSSEEEEEETTEEEEEEHHHHHHHEEEESCHHHHH--HHHTCHHHHHHHHHT----TCCTT
T ss_pred CCCcccccCCCEEEEeccccchhHhcccCCcceeechhhccccccccccccccc--cccCcHHHHHHHHhC----CCCcc
Confidence 34555667777776665554420 11224556788999999 999999999999885 77788
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHH-hhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCc
Q 046373 74 QVNAKGDTPLHLAAKFGHSNIVSFLIER-AKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGK 152 (364)
Q Consensus 74 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~ 152 (364)
..|..|.||||+|+..|+.++|++|++. +++ ++..+..|.||||+|+..|+.+++++|+++|+++. ..+..|.
T Consensus 101 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-----~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~ 174 (222)
T 3ehr_A 101 GLDKAGSTALYWACHGGHKDIVEMLFTQPNIE-----LNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTD-LRNIEKK 174 (222)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC-----CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSC-CCCTTSC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC-----ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-cccCCCC
Confidence 8899999999999999999999999988 654 77888999999999999999999999999998866 7788899
Q ss_pred hHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCC
Q 046373 153 TSLYMAAEGRYSEMVIELLENCTSVSHEGPNG 184 (364)
Q Consensus 153 t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 184 (364)
|||++|+..++.++++.|++.++.....+..+
T Consensus 175 t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~ 206 (222)
T 3ehr_A 175 LAFDMATNAACASLLKKKQGTDAVRTLSNAED 206 (222)
T ss_dssp CHHHHCCSHHHHHHHC----------------
T ss_pred CHHHHhcchhHHHHHHHHhccchhhhccchhh
Confidence 99999999999999999999988776655543
No 101
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.86 E-value=4.9e-22 Score=158.84 Aligned_cols=110 Identities=25% Similarity=0.213 Sum_probs=67.7
Q ss_pred cCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCC-CCC
Q 046373 39 TKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTN-NEK 117 (364)
Q Consensus 39 ~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~-~~g 117 (364)
.|.||||+| +..|+.+++++|++ +.+++..|..|.||||+|+..|+.+++++|++++++ ++..+ ..|
T Consensus 43 ~g~t~L~~A--~~~g~~~~v~~Ll~-----~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-----~~~~~~~~g 110 (183)
T 3deo_A 43 EYETPWWTA--ARKADEQALSQLLE-----DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-----LDHRDMRGG 110 (183)
T ss_dssp HHHHHHHHH--HHTTCHHHHHHHTT-----TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCSSSS
T ss_pred CCCCHHHHH--HHcCCHHHHHHHHh-----cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCcCCCCCC
Confidence 556666666 66666666666655 445566666666666666666666666666666644 44444 556
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhc
Q 046373 118 NTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEG 161 (364)
Q Consensus 118 ~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~ 161 (364)
.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..
T Consensus 111 ~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 111 LTALHMAAGYVRPEVVEALVELGADIE-VEDERGLTALELAREI 153 (183)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHHH
T ss_pred CCHHHHHHhcCcHHHHHHHHHcCCCCc-CCCCCCCCHHHHHHHh
Confidence 666666666666666666666666644 4555666666666554
No 102
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.85 E-value=3e-21 Score=169.97 Aligned_cols=148 Identities=18% Similarity=0.125 Sum_probs=73.4
Q ss_pred CCcHHHHHHHc-CCHHHHHHHHhcCCCCCCCCC--cCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHH
Q 046373 117 KNTALHEAVCH-GNVQVVKILTKQDPDYPYSEN--KYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAM 193 (364)
Q Consensus 117 g~t~l~~a~~~-~~~e~v~~Ll~~~~~~~~~~~--~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~ 193 (364)
+.|+||.|+.. ++.+++++|++.|++++ ..+ ..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn-~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~----------- 266 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAHGADVN-WVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADS----------- 266 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHTTCCTT-CCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-----------
T ss_pred CCcHHHHHHHccCCHHHHHHHHHcCCCCC-ccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCC-----------
Confidence 44566666666 66666666666666654 233 4566666666666666666666666666554443
Q ss_pred hhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCccccc
Q 046373 194 HFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARS 273 (364)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~ 273 (364)
.|.||||+|+..|+.+++++|+++|++ ++..|..|.||||+|+..++.+++++|+.......
T Consensus 267 -----------------~G~TpLh~A~~~g~~~~v~~LL~~Gad-~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~ 328 (368)
T 3jue_A 267 -----------------AGRGPLHHATILGHTGLACLFLKRGAD-LGARDSEGRDPLTIAMETANADIVTLLRLAKMREA 328 (368)
T ss_dssp -----------------TSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC---
T ss_pred -----------------CCCCHHHHHHHcCcHHHHHHHHHCcCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcc
Confidence 344555555555666666666666665 35556666666666666666666666665432233
Q ss_pred ccccCCCCCCcHHHHHHhcCC
Q 046373 274 LIYEGDNNGNTPLHVLAAIRP 294 (364)
Q Consensus 274 ~i~~~d~~g~t~L~~A~~~~~ 294 (364)
.....+..+.|+++++..+..
T Consensus 329 ~~~~~~~~~~t~l~i~~~~~~ 349 (368)
T 3jue_A 329 EAAQGQAGDETYLDIFRDFSL 349 (368)
T ss_dssp ---------------------
T ss_pred cccccCCCCCCHHHHHHHHHh
Confidence 333344455566665555443
No 103
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.85 E-value=7.3e-22 Score=165.25 Aligned_cols=135 Identities=21% Similarity=0.197 Sum_probs=84.0
Q ss_pred hHHHHHhcCChHHhhhccCChhHHHhhhhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHH
Q 046373 9 NFFNAAAAGDAETFKRNTTSDEIESLLTAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAK 88 (364)
Q Consensus 9 ~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~ 88 (364)
++..++..|+.+.++.+...+ . ..+..|.||||+| ++.|+.+++++|++ +.+++..|..|.||||+|+.
T Consensus 18 ~~l~~~~~g~~~~~~~~~~~~-~---~~~~~g~t~L~~A--~~~g~~~~v~~Ll~-----~~~~~~~d~~g~t~L~~A~~ 86 (244)
T 3ui2_A 18 EYLIEWKDGHSPSWVPSSYIA-A---DVVSEYETPWWTA--ARKADEQALSQLLE-----DRDVDAVDENGRTALLFVAG 86 (244)
T ss_dssp EEEEEESSCCCCEEEEGGGSC-H---HHHHHHHHHHHHH--HTTTCHHHHHHTTT-----TCCTTCBCTTSCBHHHHHHH
T ss_pred HHHHHHHcCCCcccccccccc-c---ccccCCCCHHHHH--HHcCCHHHHHHHHc-----CCCCCCcCCCCCCHHHHHHH
Confidence 344555666666655544443 1 1223566677777 66666666666655 45566666667777777777
Q ss_pred cCCHHHHHHHHHHhhHHHhHhhhcCC-CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHh
Q 046373 89 FGHSNIVSFLIERAKLAAWQMMRMTN-NEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAE 160 (364)
Q Consensus 89 ~~~~~~v~~Ll~~~~~~~~~~~~~~~-~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~ 160 (364)
.|+.++|++|++++++ ++..+ ..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+.
T Consensus 87 ~g~~~~v~~Ll~~ga~-----~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 87 LGSDKCVRLLAEAGAD-----LDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIE-VEDERGLTALELARE 153 (244)
T ss_dssp HTCHHHHHHHHHTTCC-----TTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHH
T ss_pred CCCHHHHHHHHHcCCC-----CCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCcHHHHHHH
Confidence 7777777777766654 44455 566677777777777777777777666654 556666666666664
No 104
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.84 E-value=1.2e-20 Score=132.96 Aligned_cols=93 Identities=37% Similarity=0.515 Sum_probs=80.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHH
Q 046373 78 KGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYM 157 (364)
Q Consensus 78 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~ 157 (364)
+|+||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~t~l~~ 74 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-----VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHL 74 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC-----CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHH
Confidence 478999999999999999999998865 67888899999999999999999999999998866 677889999999
Q ss_pred HHhcCCHHHHHHHHHcCCC
Q 046373 158 AAEGRYSEMVIELLENCTS 176 (364)
Q Consensus 158 A~~~~~~~~v~~Ll~~~~~ 176 (364)
|+..|+.+++++|+++|++
T Consensus 75 A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 75 AARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHTTCHHHHHHHHHTTCC
T ss_pred HHHcCCHHHHHHHHHcCCC
Confidence 9999999999999998864
No 105
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.83 E-value=1.6e-20 Score=159.80 Aligned_cols=199 Identities=16% Similarity=0.177 Sum_probs=141.4
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCC-CCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCc
Q 046373 74 QVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNE-KNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGK 152 (364)
Q Consensus 74 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~-g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~ 152 (364)
..|..+.+.++.+...|+..+.+++...-+.. ...... +....+ ....-..+++................
T Consensus 61 ~~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~-----~~~kP~~~s~~~~----~~~fI~aKYl~~~f~~~~~~~~~~~l 131 (278)
T 1dcq_A 61 TLDVLGTSELLLAKNIGNAGFNEIMECCLPSE-----DPVKPNPGSDMIA----RKDYITAKYMERRYARKKHADTAAKL 131 (278)
T ss_dssp TTSCCCGGGGHHHHHSCHHHHHHHHTTTCCSS-----SCCSCCTTCCHHH----HHHHHHHHHTTCTTSCCCSSSHHHHH
T ss_pred ecCCCCHHHHHHHHHcCcHHHHHHHHhhCChh-----hcCCCCCCCCHHH----HHHHHHHHHHHhhcccccccccchhh
Confidence 35677889999999999887766654332110 000111 111111 11111222333222221112222345
Q ss_pred hHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhc---CCHHHHH
Q 046373 153 TSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQ---GHARTVE 229 (364)
Q Consensus 153 t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~---~~~~~~~ 229 (364)
++|+.|+..++.+.++.+++.|++++..-. .......|.||||+|+.. |+.++++
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~----------------------l~~~~~~g~t~Lh~A~~~~~~~~~~~v~ 189 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIP----------------------LANGHEPDETALHLAVRSVDRTSLHIVD 189 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCC----------------------CSSCSSTTCBHHHHHHHHCCTTTHHHHH
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhcc----------------------ccccccCCCCcchHHHHhcccchHHHHH
Confidence 799999999999999999999988653210 001123688999999998 8999999
Q ss_pred HHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCCcceeehhhhcccCCc
Q 046373 230 TILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRYDAGGN 309 (364)
Q Consensus 230 ~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~~~~~ 309 (364)
+|+++|++ ++..|..|+||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+ ..++.+|+++|++
T Consensus 190 ~Ll~~ga~-in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~---gad~~~~d~~g~tpL~~A~~~~~--~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 190 FLVQNSGN-LDKQTGKGSTALHYCCLTDNAECLKLLLRG---KASIEIANESGETPLDIAKRLKH--EHCEELLTQALSG 263 (278)
T ss_dssp HHHHHCSC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTC--HHHHHHHHHHHTT
T ss_pred HHHHCCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCCccCCCCCHHHHHHHcCC--HHHHHHHHHcCCC
Confidence 99999999 688999999999999999999999999998 99999999999999999999999 5566666677764
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.82 E-value=4.1e-20 Score=162.72 Aligned_cols=146 Identities=14% Similarity=0.093 Sum_probs=111.1
Q ss_pred CCchHHHHHHhc-CCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHH
Q 046373 150 YGKTSLYMAAEG-RYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTV 228 (364)
Q Consensus 150 ~~~t~l~~A~~~-~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~ 228 (364)
.+.|+||.|+.. ++.++++.|++.|++++..+. ...|.||||+|+..|+.+++
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~--------------------------~~~g~TpLh~Aa~~g~~~iv 251 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNG--------------------------GQDNATPLIQATAANSLLAC 251 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCT--------------------------TTTCCCHHHHHHHTTCHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCcccc--------------------------ccCCCCHHHHHHHCCCHHHH
Confidence 456899999999 999999999999999886552 12578899999999999999
Q ss_pred HHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCCcceeehhhhcc-cC
Q 046373 229 ETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRYD-AG 307 (364)
Q Consensus 229 ~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~~-~~ 307 (364)
++|+++|++ ++..|..|+||||+|+..|+.+++++|+++ +++++.+|..|.||||+|+..++.+++.+++... ..
T Consensus 252 ~~LL~~Gad-vn~~d~~G~TpLh~A~~~g~~~~v~~LL~~---Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~ 327 (368)
T 3jue_A 252 EFLLQNGAN-VNQADSAGRGPLHHATILGHTGLACLFLKR---GADLGARDSEGRDPLTIAMETANADIVTLLRLAKMRE 327 (368)
T ss_dssp HHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC--
T ss_pred HHHHHcCCC-CCCCCCCCCCHHHHHHHcCcHHHHHHHHHC---cCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCc
Confidence 999999998 688999999999999999999999999998 9999999999999999999999966555544433 23
Q ss_pred CcccccccCCCchhHHhh
Q 046373 308 GNYGAVNKQNVSVTDVLI 325 (364)
Q Consensus 308 ~~~~~~n~~g~t~l~~a~ 325 (364)
++....+..+.|+++++.
T Consensus 328 ~~~~~~~~~~~t~l~i~~ 345 (368)
T 3jue_A 328 AEAAQGQAGDETYLDIFR 345 (368)
T ss_dssp ------------------
T ss_pred ccccccCCCCCCHHHHHH
Confidence 344466777899998884
No 107
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.82 E-value=1.1e-20 Score=138.94 Aligned_cols=109 Identities=28% Similarity=0.321 Sum_probs=98.4
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCch
Q 046373 74 QVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKT 153 (364)
Q Consensus 74 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t 153 (364)
..|.+|.||||+|+..|+.+++++|++++++ ++..+..|.||||+|+..++.+++++|+++|+++. ..+..|.|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~d~~g~t 77 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGAD-----VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN-ARSKDGNT 77 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCC-----SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTT-CCCTTCCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc-ccCCCCCC
Confidence 4678999999999999999999999999865 78889999999999999999999999999999876 67888999
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChH
Q 046373 154 SLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTAL 188 (364)
Q Consensus 154 ~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l 188 (364)
|||+|+..++.+++++|+++|++++..+..|.+|-
T Consensus 78 pl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 78 PEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 99999999999999999999999999888887763
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.82 E-value=1.4e-19 Score=167.11 Aligned_cols=135 Identities=18% Similarity=0.074 Sum_probs=90.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcC------CCCCCcHHHHHHH---cCCHHHHHHHHhcCCCCCCCCCcC
Q 046373 80 DTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMT------NNEKNTALHEAVC---HGNVQVVKILTKQDPDYPYSENKY 150 (364)
Q Consensus 80 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~------~~~g~t~l~~a~~---~~~~e~v~~Ll~~~~~~~~~~~~~ 150 (364)
.+.||.|+..|+.++|+.|++.|++ ++.. +..|.||||+|+. .|+.+++++|+++|++++ ..|..
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~-----~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn-~~d~~ 206 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQD-----FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD-AKAAD 206 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCC-----SSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTT-CCCSS
T ss_pred HHHHHHHHhccCHHHHHHHHhhccc-----ccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCC-ccCCC
Confidence 3667777777777777777777755 4444 6677777777755 677777777777777765 56667
Q ss_pred CchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHH
Q 046373 151 GKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVET 230 (364)
Q Consensus 151 ~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~ 230 (364)
|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++
T Consensus 207 g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~----------------------------~g~tpl~~A~~~~~~~~~~~ 258 (497)
T 3lvq_E 207 GNTALHYAALYNQPDCLKLLLKGRALVGTVNE----------------------------AGETALDIARKKHHKECEEL 258 (497)
T ss_dssp SCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCT----------------------------TCCCHHHHHHHTTCHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC----------------------------CCCCHHHHHHHcCCHHHHHH
Confidence 77777777777777777777777777765544 46677777777777777777
Q ss_pred HHhcCCcccccccCCCCcHHHHHHH
Q 046373 231 ILFLDPKCYELVDHRGWNFLHYAMV 255 (364)
Q Consensus 231 Ll~~~~~~~~~~d~~g~t~l~~a~~ 255 (364)
|+++|+++ +. +|+|.+..
T Consensus 259 Ll~~ga~~-~~------~~~h~~~~ 276 (497)
T 3lvq_E 259 LEQAQAGT-FA------FPLHVDYS 276 (497)
T ss_dssp HHHTCC-------------------
T ss_pred HHHhCCCC-CC------Ccceeecc
Confidence 77777764 22 46665544
No 109
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.82 E-value=4.2e-20 Score=170.53 Aligned_cols=127 Identities=23% Similarity=0.112 Sum_probs=113.6
Q ss_pred chHHHHHHHHHhcCCChHHHHHHHhcCCcccccc------CCCCCcHHHHHHH---cCCHHHHHHHHHHhhHHHhHhhhc
Q 046373 42 TILHINIISQKRKNGSTKFIGEMLKKCPSLLLQV------NAKGDTPLHLAAK---FGHSNIVSFLIERAKLAAWQMMRM 112 (364)
Q Consensus 42 t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~------~~~g~t~L~~A~~---~~~~~~v~~Ll~~~~~~~~~~~~~ 112 (364)
+.||.| +..|+.+.++.|++. +.+++.. +..|.||||+||. .|+.+++++|+++|++ ++.
T Consensus 134 ~~L~~A--~~~g~~~~v~~ll~~----g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~-----vn~ 202 (497)
T 3lvq_E 134 QRLWTA--ICNRDLLSVLEAFAN----GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-----LDA 202 (497)
T ss_dssp HHHHHH--HHHTCHHHHHHHHHT----TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-----TTC
T ss_pred HHHHHH--HhccCHHHHHHHHhh----cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC-----CCc
Confidence 569999 999999999999986 6777766 8899999999977 8999999999999976 788
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCC
Q 046373 113 TNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHE 180 (364)
Q Consensus 113 ~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~ 180 (364)
.|..|.||||+|+..|+.+++++|+++|++++ ..|..|.||||+|+..|+.+++++|+++|++++..
T Consensus 203 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~ 269 (497)
T 3lvq_E 203 KAADGNTALHYAALYNQPDCLKLLLKGRALVG-TVNEAGETALDIARKKHHKECEELLEQAQAGTFAF 269 (497)
T ss_dssp CCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCS-CCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999976 77889999999999999999999999999998764
No 110
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.81 E-value=1.3e-19 Score=154.26 Aligned_cols=130 Identities=18% Similarity=0.085 Sum_probs=112.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHHHhhHHHhHh-hhcCCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCCCCCCCcCCchHH
Q 046373 80 DTPLHLAAKFGHSNIVSFLIERAKLAAWQM-MRMTNNEKNTALHEAVCH---GNVQVVKILTKQDPDYPYSENKYGKTSL 155 (364)
Q Consensus 80 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~-~~~~~~~g~t~l~~a~~~---~~~e~v~~Ll~~~~~~~~~~~~~~~t~l 155 (364)
.++|+.|+..|+.+.++.+++.+.+..... ++..+..|.||||+|+.. |+.+++++|+++|++++ ..|..|.|||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in-~~d~~g~TpL 209 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLD-KQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTT-CCCTTCCCHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCcc-ccCCCCCCHH
Confidence 578999999999999999999987632222 444578899999999999 89999999999999976 7788899999
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHhcC
Q 046373 156 YMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILFLD 235 (364)
Q Consensus 156 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~ 235 (364)
|+|+..|+.+++++|+++|++++.++. .|.||||+|+..|+.+++++|++++
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad~~~~d~----------------------------~g~tpL~~A~~~~~~~~v~~Ll~~g 261 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKASIEIANE----------------------------SGETPLDIAKRLKHEHCEELLTQAL 261 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCT----------------------------TSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCccC----------------------------CCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 999999999999999999999887665 5777888888889999999999988
Q ss_pred Ccc
Q 046373 236 PKC 238 (364)
Q Consensus 236 ~~~ 238 (364)
++.
T Consensus 262 a~~ 264 (278)
T 1dcq_A 262 SGR 264 (278)
T ss_dssp TTC
T ss_pred CCC
Confidence 864
No 111
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.81 E-value=4.6e-20 Score=129.97 Aligned_cols=93 Identities=29% Similarity=0.409 Sum_probs=85.8
Q ss_pred cCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCC
Q 046373 39 TKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKN 118 (364)
Q Consensus 39 ~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~ 118 (364)
+|.||||+| +..|+.+++++|++. +.+++..|..|.||||+|+..|+.+++++|++++++ ++..+..|.
T Consensus 1 ~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-----~~~~d~~g~ 69 (93)
T 1n0q_A 1 NGRTPLHLA--ARNGHLEVVKLLLEA----GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-----VNAKDKNGR 69 (93)
T ss_dssp --CCHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSC
T ss_pred CCCcHHHHH--HHcCCHHHHHHHHHc----CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCccCCCCC
Confidence 489999999 999999999999986 788999999999999999999999999999999976 788899999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCC
Q 046373 119 TALHEAVCHGNVQVVKILTKQDPD 142 (364)
Q Consensus 119 t~l~~a~~~~~~e~v~~Ll~~~~~ 142 (364)
||||+|+..|+.+++++|+++|++
T Consensus 70 t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 70 TPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999998863
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.79 E-value=9.7e-20 Score=133.77 Aligned_cols=107 Identities=23% Similarity=0.214 Sum_probs=97.7
Q ss_pred cCCCchHHHHHHhcCCHHHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHH
Q 046373 209 KDRKMTALHLAAGQGHARTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHV 288 (364)
Q Consensus 209 ~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~ 288 (364)
+..|.||||.|+..|+.+++++|++++++ ++..|..|+||||+|+..++.+++++|++. +++++.+|..|.||||+
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~d~~g~tpl~~ 81 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGAD-VNARSKDGNTPLHLAAKNGHAEIVKLLLAK---GADVNARSKDGNTPEHL 81 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTTT---TCCTTCCCTTCCCTTHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHc---CCCCcccCCCCCCHHHH
Confidence 45799999999999999999999999998 588899999999999999999999999998 89999999999999999
Q ss_pred HHhcCCcceeehhhhcccCCcccccccCCCchh
Q 046373 289 LAAIRPKEFFKIKVRYDAGGNYGAVNKQNVSVT 321 (364)
Q Consensus 289 A~~~~~~~~~~~~ll~~~~~~~~~~n~~g~t~l 321 (364)
|+..++ ...+.+|+++|++++.++..|.+|-
T Consensus 82 A~~~~~--~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 82 AKKNGH--HEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp HHTTTC--HHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HHHCCC--HHHHHHHHHcCCCCCcCCccccccc
Confidence 999999 6677788899999999999999885
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.72 E-value=1.6e-17 Score=120.69 Aligned_cols=95 Identities=22% Similarity=0.329 Sum_probs=77.5
Q ss_pred ccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCc
Q 046373 70 SLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQDPDYPYSENK 149 (364)
Q Consensus 70 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~~~~~~~~~~ 149 (364)
......|.+|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|+++|++++ ..+.
T Consensus 15 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~-~~d~ 88 (110)
T 2zgd_A 15 PRGSHMGSDLGKKLLEAARAGQDDEVRILMANGAD-----VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVX-AQDK 88 (110)
T ss_dssp -------CCHHHHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCT
T ss_pred CcccccCCccchHHHHHHHcCCHHHHHHHHHcCCC-----CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-cccc
Confidence 34556778889999999999999999999988865 67788889999999999999999999999988865 6777
Q ss_pred CCchHHHHHHhcCCHHHHHHH
Q 046373 150 YGKTSLYMAAEGRYSEMVIEL 170 (364)
Q Consensus 150 ~~~t~l~~A~~~~~~~~v~~L 170 (364)
.|.||||+|+..|+.+++++|
T Consensus 89 ~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 89 FGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp TSCCHHHHHHHHTCHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHh
Confidence 899999999999999998876
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.67 E-value=3.2e-16 Score=113.75 Aligned_cols=90 Identities=23% Similarity=0.178 Sum_probs=50.9
Q ss_pred CCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHH
Q 046373 147 ENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHAR 226 (364)
Q Consensus 147 ~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~ 226 (364)
.+..|.||||+|+..|+.+++++|++.|++++.++. .|.||||+|+..|+.+
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~----------------------------~g~tpLh~A~~~~~~~ 71 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDK----------------------------NGSTPLHLAARNGHLE 71 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCT----------------------------TCCCHHHHHHHTTCHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCC----------------------------CCCCHHHHHHHcCCHH
Confidence 344556666666666666666666666655544333 3445555555556666
Q ss_pred HHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHHH
Q 046373 227 TVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKIL 265 (364)
Q Consensus 227 ~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~l 265 (364)
++++|+++|++ ++..|..|+||||+|+..++.+++++|
T Consensus 72 ~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 72 VVKLLLEAGAD-VXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHcCCC-ccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 66666666555 355566666666666666666655543
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=64.82 E-value=2.3 Score=22.69 Aligned_cols=20 Identities=30% Similarity=0.429 Sum_probs=16.4
Q ss_pred ChhHHHHHhcCChHHhhhcc
Q 046373 7 YPNFFNAAAAGDAETFKRNT 26 (364)
Q Consensus 7 ~~~l~~A~~~g~~~~v~~ll 26 (364)
...++.|+..||.+.++.|-
T Consensus 14 EQqiyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 14 RKQMDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHH
Confidence 45788899999999998764
No 116
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=49.56 E-value=41 Score=28.66 Aligned_cols=265 Identities=8% Similarity=0.020 Sum_probs=133.0
Q ss_pred HHHhhhhccCCchHHHHHHHHHhcCCChHHHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhh
Q 046373 31 IESLLTAQTKNTILHINIISQKRKNGSTKFIGEMLKKCPSLLLQVNAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMM 110 (364)
Q Consensus 31 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 110 (364)
+.....|..|.-.+... ...++.+..+.+.+.+... ...-..|..|+..+.-....++.+....+++.-... ..-
T Consensus 28 i~~la~dq~gsR~lQ~~--l~~~~~~~~~~i~~ei~~~-~~~L~~d~~gn~vvQklle~~~~~~~~~i~~~i~g~--~~~ 102 (351)
T 3gvo_A 28 IVEFSQDQHGSRFIQQK--LERATPAERQIVFNEILQA-AYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGH--VLP 102 (351)
T ss_dssp HHHHHTSHHHHHHHHHH--HHHCCHHHHHHHHHHHGGG-HHHHHTSTTHHHHHHHHHHHCCHHHHHHHHHHHTTC--HHH
T ss_pred HHHHhcCCcchHHHHHH--HhhCCHHHHHHHHHHHHHh-HHHHHhChhhhHHHHHHHhhCCHHHHHHHHHHHHhh--HHH
Confidence 44556666777777777 7777666666665544321 223346777777777777777777666666543211 112
Q ss_pred hcCCCCCCcHHHHHHHcCCHHHHHHHHhc-CCC-CCCCCCcCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChH
Q 046373 111 RMTNNEKNTALHEAVCHGNVQVVKILTKQ-DPD-YPYSENKYGKTSLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTAL 188 (364)
Q Consensus 111 ~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~-~~~-~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l 188 (364)
-..+.+|...+..+......+-...+++. .+. .....|..|...+..+...+..+..+.+++.-.
T Consensus 103 l~~~~~G~rvvQk~le~~~~~~~~~i~~el~~~~~~L~~d~~Gn~ViQk~l~~~~~~~~~~i~~~~~------------- 169 (351)
T 3gvo_A 103 LALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFK------------- 169 (351)
T ss_dssp HHTSTTHHHHHHHHHHHSCHHHHHHHHGGGTTCHHHHHHSTTHHHHHHHHHHHSCGGGTHHHHHHTT-------------
T ss_pred HhhCHHhHHHHHHHHHhCCHHHHHHHHHHhhhhHHHHHHhhhhhHHHHHHHHhCCHHHHHHHHHHHH-------------
Confidence 33566777777777776665544444432 110 011223344444444433333222222222110
Q ss_pred HHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCH----HHHHHHHhcCCcccccccCCCCcHHHHHHHcCCHHHHHH
Q 046373 189 HAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHA----RTVETILFLDPKCYELVDHRGWNFLHYAMVSFKLHELKI 264 (364)
Q Consensus 189 ~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~----~~~~~Ll~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~ 264 (364)
...........|...+..+...... .+++.|..+-.. -..|..|+-.+..+...+..+..+.
T Consensus 170 ------------~~~~~ls~~~~G~~Vvq~~le~~~~~~~~~ii~~l~~~~~~--L~~d~~Gn~ViQ~~l~~~~~~~~~~ 235 (351)
T 3gvo_A 170 ------------GQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQ--LVQDQYGNYVIQHVLEHGRPEDKSK 235 (351)
T ss_dssp ------------TTHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHHHHTTHHH--HHTSTTHHHHHHHHHHHSCHHHHHH
T ss_pred ------------HHHHHHHhCcHhHHHHHHHHHHCCHHHHHHHHHHHhhhHHh--cCCCchHHHHHHHHHHhCchhhHHH
Confidence 0011111222333333333333332 233333321111 1357778888888888888777777
Q ss_pred HHhCcccccccccCCCCCCcHHHHHHhcCCcceee--hhhhcc--cCC----cccccccCCCchhHHhhhc
Q 046373 265 LLKNPLARSLIYEGDNNGNTPLHVLAAIRPKEFFK--IKVRYD--AGG----NYGAVNKQNVSVTDVLIYG 327 (364)
Q Consensus 265 ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~--~~ll~~--~~~----~~~~~n~~g~t~l~~a~~~ 327 (364)
+++.+.....-=..++.|...+.-+...+..+... +.-++. .|. ..-..|.+|.-+++.+...
T Consensus 236 i~~~l~~~~~~Ls~~k~gs~Vvek~l~~~~~~~r~~ii~el~~~~~~~~~~l~~l~~d~ygnyViq~~L~~ 306 (351)
T 3gvo_A 236 IVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDM 306 (351)
T ss_dssp HHHTTTTCHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHHHHSCEETTEEHHHHHHHSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHhCCHHHHHHHHHHHhcccCCCChHHHHccCCcchHHHHHHHHHh
Confidence 77665443323334667777777777766633211 111111 111 1125678888888777533
No 117
>3k49_A MRNA-binding protein PUF3; PUF3, pumilio, RNA binding, mitochondrial mRNA,, membrane, mitochondrion; HET: CIT; 2.50A {Saccharomyces cerevisiae} SCOP: a.118.1.0 PDB: 3k4e_A
Probab=45.90 E-value=56 Score=28.06 Aligned_cols=26 Identities=4% Similarity=0.078 Sum_probs=14.1
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHhC
Q 046373 243 DHRGWNFLHYAMVSFKLHELKILLKN 268 (364)
Q Consensus 243 d~~g~t~l~~a~~~~~~~~~~~ll~~ 268 (364)
+..|...+..+...+..+.-+.+++.
T Consensus 261 ~k~gS~Vvek~l~~~~~~~r~~ii~~ 286 (369)
T 3k49_A 261 HKFASNVVEKSILYGSKNQKDLIISK 286 (369)
T ss_dssp STTHHHHHHHHHHHSCHHHHHHHHTT
T ss_pred hhHhhHHHHHHHHhCCHHHHHHHHHH
Confidence 44455555555555555555555554
No 118
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=31.84 E-value=42 Score=28.60 Aligned_cols=224 Identities=11% Similarity=0.014 Sum_probs=104.7
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHhhHHHhHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHhcC--CCCCCCCCcCCch
Q 046373 76 NAKGDTPLHLAAKFGHSNIVSFLIERAKLAAWQMMRMTNNEKNTALHEAVCHGNVQVVKILTKQD--PDYPYSENKYGKT 153 (364)
Q Consensus 76 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~e~v~~Ll~~~--~~~~~~~~~~~~t 153 (364)
|..|...|......++.+-.+.+++.-... ...-..|..|...+......++.+....+++.- .-.....+..|..
T Consensus 34 dq~gsR~lQ~~l~~~~~~~~~~i~~ei~~~--~~~L~~d~~gn~vvQklle~~~~~~~~~i~~~i~g~~~~l~~~~~G~r 111 (351)
T 3gvo_A 34 DQHGSRFIQQKLERATPAERQIVFNEILQA--AYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCR 111 (351)
T ss_dssp SHHHHHHHHHHHHHCCHHHHHHHHHHHGGG--HHHHHTSTTHHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHTSTTHHH
T ss_pred CCcchHHHHHHHhhCCHHHHHHHHHHHHHh--HHHHHhChhhhHHHHHHHhhCCHHHHHHHHHHHHhhHHHHhhCHHhHH
Confidence 334444555555555555444444433221 113456888888888888888888777776531 1111123344444
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCChHHHHHHhhhhhcchhhhhhhccCCCchHHHHHHhcCCHHHHHHHHh
Q 046373 154 SLYMAAEGRYSEMVIELLENCTSVSHEGPNGKTALHAAAMHFYFENDQTAADIADKDRKMTALHLAAGQGHARTVETILF 233 (364)
Q Consensus 154 ~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~ 233 (364)
.+..+......+-...+++. ..+.......+..|...+......+..+..+++++
T Consensus 112 vvQk~le~~~~~~~~~i~~e-------------------------l~~~~~~L~~d~~Gn~ViQk~l~~~~~~~~~~i~~ 166 (351)
T 3gvo_A 112 VIQKALESISSDQQSEMVKE-------------------------LDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIID 166 (351)
T ss_dssp HHHHHHHHSCHHHHHHHHGG-------------------------GTTCHHHHHHSTTHHHHHHHHHHHSCGGGTHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHH-------------------------hhhhHHHHHHhhhhhHHHHHHHHhCCHHHHHHHHH
Confidence 44444444443332333221 11111122223344444444444444333333333
Q ss_pred cCCccc--ccccCCCCcHHHHHHHcCCHHHHHHHHhCcccccccccCCCCCCcHHHHHHhcCCcceeehhhhc-ccCCcc
Q 046373 234 LDPKCY--ELVDHRGWNFLHYAMVSFKLHELKILLKNPLARSLIYEGDNNGNTPLHVLAAIRPKEFFKIKVRY-DAGGNY 310 (364)
Q Consensus 234 ~~~~~~--~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~i~~~d~~g~t~L~~A~~~~~~~~~~~~ll~-~~~~~~ 310 (364)
.-...+ -..+..|-..+..+......+-...+++.+......=..|..|+-.+..+...+.++.....+-. ......
T Consensus 167 ~~~~~~~~ls~~~~G~~Vvq~~le~~~~~~~~~ii~~l~~~~~~L~~d~~Gn~ViQ~~l~~~~~~~~~~i~~~l~~~~~~ 246 (351)
T 3gvo_A 167 AFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLA 246 (351)
T ss_dssp HTTTTHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHHHHTTHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHTTTTCHHH
T ss_pred HHHHHHHHHHhCcHhHHHHHHHHHHCCHHHHHHHHHHHhhhHHhcCCCchHHHHHHHHHHhCchhhHHHHHHHHHHHHHH
Confidence 221111 01234454455555554444433333333222333334688898888888888875432221110 111111
Q ss_pred cccccCCCchhHHhhh
Q 046373 311 GAVNKQNVSVTDVLIY 326 (364)
Q Consensus 311 ~~~n~~g~t~l~~a~~ 326 (364)
=..+..|-.+++-+..
T Consensus 247 Ls~~k~gs~Vvek~l~ 262 (351)
T 3gvo_A 247 LSQHKFASNVVEKCVT 262 (351)
T ss_dssp HHTSTTHHHHHHHHHH
T ss_pred HhcCcHHHHHHHHHHH
Confidence 1456677666666643
Done!