BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046375
(276 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1KYW|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|F Chain F, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYZ|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|E Chain E, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
Length = 365
Score = 169 bits (427), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 126/212 (59%), Gaps = 10/212 (4%)
Query: 66 EPLYGLTHSSRWLVTGSDSNQLGPVFLVENHPYMVNSWHFLSQCVKEGGSAIEKAFGDAY 125
+ LYGL +++LV D + + L+ ++ SW+ L V +GG KA+G
Sbjct: 103 QRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTA 162
Query: 126 IDLASKDQQFNKIFNEGMACNAKFLTREILAGYKHGFDSLKSLVDVAGGIGGLISEIVKS 185
+ D +FNK+FN+GM+ ++ ++IL Y GF+ LKSLVDV GG G +I+ IV
Sbjct: 163 FEYHGTDPRFNKVFNKGMSDHSTITMKKILETYT-GFEGLKSLVDVGGGTGAVINTIVSK 221
Query: 186 YPHIKGINFDLPHVITTAPVYDGVTHVSGDMFHTIPNADALLLKWVLHNWSDEACER-TE 244
YP IKGINFDLPHVI AP Y GV HV GDMF +IP ADA+ +KW+ H+WSDE C + +
Sbjct: 222 YPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLK 281
Query: 245 LEWKNIPEKGGSPRYRIIKIPALQCIIESYPE 276
++ +P+ G K+ +CI+ P+
Sbjct: 282 NCYEALPDNG--------KVIVAECILPVAPD 305
>pdb|3P9C|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Bound To
Sah
pdb|3P9I|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9K|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
Length = 364
Score = 166 bits (421), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 148/282 (52%), Gaps = 17/282 (6%)
Query: 2 LALKCAIELRIPDIIHSHGGPXXXXXXXXXXXXXXXXXXX--XXXXXMRLLGHKNIFA-- 57
+ LK AIEL + +I+ + GG +RLL N+
Sbjct: 35 MTLKNAIELGLLEILVAAGGKSLTPTEVAAKLPSAANPEAPDMVDRILRLLASYNVVTCL 94
Query: 58 AQHPSDGG-EPLYGLTHSSRWLVTGSDSNQLGPVFLVENHPYMVNSWHFLSQCVKEGGSA 116
+ DG YG ++L D + + L+ ++ SW++L V +GG
Sbjct: 95 VEEGKDGRLSRSYGAAPVCKFLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIP 154
Query: 117 IEKAFGDAYIDLASKDQQFNKIFNEGMACNAKFLTREILAGYKHGFDSLKSLVDVAGGIG 176
KA+G + + D +FN++FNEGM ++ +T+++L Y HGF+ L +LVDV GG+G
Sbjct: 155 FNKAYGMSAFEYHGTDPRFNRVFNEGMKNHSIIITKKLLELY-HGFEGLGTLVDVGGGVG 213
Query: 177 GLISEIVKSYPHIKGINFDLPHVITTAPVYDGVTHVSGDMFHTIPNADALLLKWVLHNWS 236
++ I YP IKG+NFDLPHVI+ AP + GVTHV GDMF +P+ D +L+KW+LH+WS
Sbjct: 214 ATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFKEVPSGDTILMKWILHDWS 273
Query: 237 DEACERTELE--WKNIPEKGGSPRYRIIKIPALQCIIESYPE 276
D+ C T L+ + +P G K+ +QCI+ PE
Sbjct: 274 DQHCA-TLLKNCYDALPAHG--------KVVLVQCILPVNPE 306
>pdb|3REO|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3REO|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3REO|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3REO|D Chain D, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|D Chain D, Monolignol O-Methyltransferase (Momt)
Length = 368
Score = 163 bits (413), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 124/247 (50%), Gaps = 7/247 (2%)
Query: 2 LALKCAIELRIPDIIHSHGGPX---XXXXXXXXXXXXXXXXXXXXXXXMRLLGHKNIFA- 57
+ALK AIEL + +I+ P +RLL ++
Sbjct: 36 MALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTY 95
Query: 58 --AQHPSDGGEPLYGLTHSSRWLVTGSDSNQLGPVFLVENHPYMVNSWHFLSQCVKEGGS 115
+ PS E LYGL ++L D L P L+ ++ W +L + EGG
Sbjct: 96 TLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLLATDKVLLEPWFYLKDAILEGGI 155
Query: 116 AIEKAFGDAYIDLASKDQQFNKIFNEGMACNAKFLTREILAGYKHGFDSLKSLVDVAGGI 175
KA+G D D + NK+FN+GM+ N+ ++IL Y +GF+ L ++VDV GG
Sbjct: 156 PFNKAYGMNIFDYHGTDHRINKVFNKGMSSNSTITMKKILEMY-NGFEGLTTIVDVGGGT 214
Query: 176 GGLISEIVKSYPHIKGINFDLPHVITTAPVYDGVTHVSGDMFHTIPNADALLLKWVLHNW 235
G + S IV YP I INFDLPHVI AP + GV H+ GDMF +P DA+ +KW+ H+W
Sbjct: 215 GAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFDGVPKGDAIFIKWICHDW 274
Query: 236 SDEACER 242
SDE C +
Sbjct: 275 SDEHCLK 281
>pdb|1FP2|A Chain A, Crystal Structure Analysis Of Isoflavone
O-Methyltransferase
Length = 352
Score = 134 bits (336), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 122/243 (50%), Gaps = 7/243 (2%)
Query: 1 SLALKCAIELRIPDIIHSHGGPXXXXXXXXXXXXXXXXXXXXXXXXMRLLGHKNIFAAQH 60
S++LK A+E+ IP+II +HG P MR L H F
Sbjct: 30 SMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVRRL-MRYLAHNGFFEIIT 88
Query: 61 PSDGGEPLYGLTHSSRWLVTGSDSNQLGPVFLVENHPYMVNSWHFLSQCV-KEGGSAIEK 119
E Y LT +S LV GSD L P+ P + S+H L + + +E +
Sbjct: 89 KE---EESYALTVASELLVRGSDL-CLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGV 144
Query: 120 AFGDAYIDLASKDQQFNKIFNEGMACNAKFLTREILAGYKHGFDSLKSLVDVAGGIGGLI 179
G + D K+ ++N FN+ MA ++K + L FD L+S+VDV GG G
Sbjct: 145 TLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLA-LRDCDFVFDGLESIVDVGGGTGTTA 203
Query: 180 SEIVKSYPHIKGINFDLPHVITTAPVYDGVTHVSGDMFHTIPNADALLLKWVLHNWSDEA 239
I +++P +K I FD P V+ + +T+V GDMF +IPNADA+LLK++LHNW+D+
Sbjct: 204 KIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKD 263
Query: 240 CER 242
C R
Sbjct: 264 CLR 266
>pdb|1FP1|D Chain D, Crystal Structure Analysis Of Chalcone O-Methyltransferase
Length = 372
Score = 131 bits (329), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 115/222 (51%), Gaps = 9/222 (4%)
Query: 47 MRLLGHKNIFAAQHPS--DGG-EPLYGLTHSSRWLVTGSDSNQLGPVFLVENHPYMVNSW 103
+RLL ++ + + DGG E +YGL+ ++LV L +P ++ W
Sbjct: 89 LRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVW 148
Query: 104 -HFLSQCVKEGGSAIEKAFGDAYIDLASKDQQFNKIFNEGMACNAKFLTREILAGYKHGF 162
+F V E + G + KD++ N+IFN+ M + +L Y GF
Sbjct: 149 MNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYT-GF 207
Query: 163 DSLKSLVDVAGGIGGLISEIVKSYPHIKGINFDLPHVITTAPVYDGVTHVSGDMFHTIPN 222
+ + +LVDV GG G + I+ YP IKGINFDLP VI AP G+ HV GDMF ++P
Sbjct: 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFASVPQ 267
Query: 223 ADALLLKWVLHNWSDEACERTELEWKNIPEKGGSPRYRIIKI 264
DA++LK V HNWSDE C +E+ + K SP ++I +
Sbjct: 268 GDAMILKAVCHNWSDEKC----IEFLSNCHKALSPNGKVIIV 305
>pdb|1FPX|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Isoflavone O-Methyltransferase
Length = 352
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 116/243 (47%), Gaps = 7/243 (2%)
Query: 1 SLALKCAIELRIPDIIHSHGGPXXXXXXXXXXXXXXXXXXXXXXXXMRLLGHKNIFAAQH 60
S +LK A+E IP+II +HG P R L H F
Sbjct: 30 SXSLKWAVEXNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVRRL-XRYLAHNGFFEIIT 88
Query: 61 PSDGGEPLYGLTHSSRWLVTGSDSNQLGPVFLVENHPYMVNSWHFLSQCV-KEGGSAIEK 119
E Y LT +S LV GSD L P P + S+H L + + +E +
Sbjct: 89 KE---EESYALTVASELLVRGSDL-CLAPXVECVLDPTLSGSYHELKKWIYEEDLTLFGV 144
Query: 120 AFGDAYIDLASKDQQFNKIFNEGMACNAKFLTREILAGYKHGFDSLKSLVDVAGGIGGLI 179
G + D K+ ++N FN+ A ++K + L FD L+S+VDV GG G
Sbjct: 145 TLGSGFWDFLDKNPEYNTSFNDAXASDSKLINLA-LRDCDFVFDGLESIVDVGGGTGTTA 203
Query: 180 SEIVKSYPHIKGINFDLPHVITTAPVYDGVTHVSGDMFHTIPNADALLLKWVLHNWSDEA 239
I +++P +K I FD P V+ + +T+V GD F +IPNADA+LLK++LHNW+D+
Sbjct: 204 KIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDXFTSIPNADAVLLKYILHNWTDKD 263
Query: 240 CER 242
C R
Sbjct: 264 CLR 266
>pdb|1FPQ|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Chalcone O- Methyltransferase
Length = 372
Score = 120 bits (301), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 100/200 (50%), Gaps = 6/200 (3%)
Query: 64 GGEPLYGLTHSSRWLVTGSDSNQLGPVFLVENHPYMVNSW-HFLSQCVKEGGSAIEKAFG 122
G E +YGL+ ++LV L +P ++ W +F V E + G
Sbjct: 109 GAERVYGLSXVGKYLVPDESRGYLASFTTFLCYPALLQVWXNFKEAVVDEDIDLFKNVHG 168
Query: 123 DAYIDLASKDQQFNKIFNEGMACNAKFLTREILAGYKHGFDSLKSLVDVAGGIGGLISEI 182
+ KD++ N+IFN+ + L Y GF+ + +LVDV GG G + I
Sbjct: 169 VTKYEFXGKDKKXNQIFNKSXVDVCATEXKRXLEIYT-GFEGISTLVDVGGGSGRNLELI 227
Query: 183 VKSYPHIKGINFDLPHVITTAPVYDGVTHVSGDMFHTIPNADALLLKWVLHNWSDEACER 242
+ YP IKGINFDLP VI AP G+ HV GD F ++P DA +LK V HNWSDE C
Sbjct: 228 ISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDXFASVPQGDAXILKAVCHNWSDEKC-- 285
Query: 243 TELEWKNIPEKGGSPRYRII 262
+E+ + K SP ++I
Sbjct: 286 --IEFLSNCHKALSPNGKVI 303
>pdb|2QYO|A Chain A, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
pdb|2QYO|B Chain B, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
Length = 357
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 139/331 (41%), Gaps = 59/331 (17%)
Query: 1 SLALKCAIELRIPDIIHSHGGPXXXXXXXXXXXXXXXXXXXXXXXXMRLLGHKNIFA--A 58
S++LK +IE+ IP+IIH+HG P MR L H F
Sbjct: 30 SMSLKWSIEMNIPNIIHNHGKPITLSNLVSILQIPSTKVDNVQRL-MRYLAHNGFFEIIT 88
Query: 59 QHPSDGGEPLYGLTHSSRWLVTGSDSNQLGPVFLVENHPYMVNSWHFLSQCV-KEGGSAI 117
+ E Y LT +S LV G++ L P+ P + S+H L + V +E +
Sbjct: 89 NQELENEEEAYALTVASELLVKGTEL-CLAPMVECVLDPTLSTSFHNLKKWVYEEDLTLF 147
Query: 118 EKAFGDAYIDLASKDQQFNKIFNEGMACNAKFLTREILAGYKHGFDSLKSLVDVAGGIGG 177
G + +K+ ++N ++N+ +A ++K + + F+ L+S+VDV GG G
Sbjct: 148 AVNLGCDLWEFLNKNPEYNTLYNDALASDSKMINLA-MKDCNLVFEGLESIVDVGGGNGT 206
Query: 178 LISEIVKSYPHIKGINFDLPHVITTAPVYDGVTHVSGDMFHTIPNADALLLKWVLHNWSD 237
I +++P + + FD P V+ + +T+V GDMF ++P ADA+LLK VLH+W+D
Sbjct: 207 TGKIICETFPKLTCVVFDRPKVVENLCGSNNLTYVGGDMFISVPKADAVLLKAVLHDWTD 266
Query: 238 EAC-----------------------------------------------------ERTE 244
+ C ER E
Sbjct: 267 KDCIKILKKCKEAVTSDGKRGKVIVIDMVINEKKDENQLTQIKLLMNVTISCVNGKERNE 326
Query: 245 LEWKNIPEKGGSPRYRIIKIPALQCIIESYP 275
EWK + + G Y+I L +IE YP
Sbjct: 327 EEWKKLFIEAGFQDYKISPFTGLMSLIEIYP 357
>pdb|1ZG3|A Chain A, Crystal Structure Of The Isoflavanone
4'-O-Methyltransferase Complexed With Sah And
2,7,4'-Trihydroxyisoflavanone
Length = 358
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 132/274 (48%), Gaps = 13/274 (4%)
Query: 1 SLALKCAIELRIPDIIHSHGGPXXXXXXXXXXXXXXXXXXXXXXXXMRLLGHKNIFAAQ- 59
S+ALK A+EL I D IH+HG P +RLL H FA
Sbjct: 24 SMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNILHRF-LRLLTHNGFFAKTI 82
Query: 60 ----HPSDGGEPLYGLTHSSRWLVTGSDSNQLGPVFLVENHPYMVNSWHFLSQCVKEGG- 114
+ E Y LT S+ L++G + L + HP ++ W + E
Sbjct: 83 VKGKEGDEEEEIAYSLTPPSKLLISGKPTC-LSSIVKGALHPSSLDMWSSSKKWFNEDKE 141
Query: 115 -SAIEKAFGDAYIDLASKDQQFNKI--FNEGMACNAKFLTREILAGYKHGFDSLKSLVDV 171
+ E A G+++ D +KD + + + F + MA +++ + +L K F+ L+SLVDV
Sbjct: 142 QTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMF-KLVLQENKRVFEGLESLVDV 200
Query: 172 AGGIGGLISEIVKSYPHIKGINFDLPHVITTAPVYDGVTHVSGDMFHTIPNADALLLKWV 231
GG GG+ I + +PH+K FD P V+ + + V GDMF +IP+ADA+LLKWV
Sbjct: 201 GGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPSADAVLLKWV 260
Query: 232 LHNWSDEACERTELEWKN-IPEKGGSPRYRIIKI 264
LH+W+DE + K I KG + II I
Sbjct: 261 LHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDI 294
>pdb|1ZGA|A Chain A, Crystal Structure Of Isoflavanone 4'-o-methyltransferase
Complexed With (+)-6a-hydroxymaackiain
pdb|1ZHF|A Chain A, Crystal Structure Of Selenomethionine Substituted
Isoflavanone 4'-O- Methyltransferase
Length = 357
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 132/274 (48%), Gaps = 13/274 (4%)
Query: 1 SLALKCAIELRIPDIIHSHGGPXXXXXXXXXXXXXXXXXXXXXXXXMRLLGHKNIFAAQ- 59
S+ALK A+EL I D IH+HG P +RLL H FA
Sbjct: 23 SMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNILHRF-LRLLTHNGFFAKTI 81
Query: 60 ----HPSDGGEPLYGLTHSSRWLVTGSDSNQLGPVFLVENHPYMVNSWHFLSQCVKEGG- 114
+ E Y LT S+ L++G + L + HP ++ W + E
Sbjct: 82 VKGKEGDEEEEIAYSLTPPSKLLISGKPTC-LSSIVKGALHPSSLDMWSSSKKWFNEDKE 140
Query: 115 -SAIEKAFGDAYIDLASKDQQFNKI--FNEGMACNAKFLTREILAGYKHGFDSLKSLVDV 171
+ E A G+++ D +KD + + + F + MA +++ + +L K F+ L+SLVDV
Sbjct: 141 QTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMF-KLVLQENKRVFEGLESLVDV 199
Query: 172 AGGIGGLISEIVKSYPHIKGINFDLPHVITTAPVYDGVTHVSGDMFHTIPNADALLLKWV 231
GG GG+ I + +PH+K FD P V+ + + V GDMF +IP+ADA+LLKWV
Sbjct: 200 GGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPSADAVLLKWV 259
Query: 232 LHNWSDEACERTELEWKN-IPEKGGSPRYRIIKI 264
LH+W+DE + K I KG + II I
Sbjct: 260 LHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDI 293
>pdb|1ZGJ|A Chain A, Crystal Structure Of Isoflavanone 4'-O-Methyltransferase
Complexed With (+)-Pisatin
Length = 354
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 132/274 (48%), Gaps = 13/274 (4%)
Query: 1 SLALKCAIELRIPDIIHSHGGPXXXXXXXXXXXXXXXXXXXXXXXXMRLLGHKNIFAAQ- 59
S+ALK A+EL I D IH+HG P +RLL H FA
Sbjct: 20 SMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNILHRF-LRLLTHNGFFAKTI 78
Query: 60 ----HPSDGGEPLYGLTHSSRWLVTGSDSNQLGPVFLVENHPYMVNSWHFLSQCVKEGG- 114
+ E Y LT S+ L++G + L + HP ++ W + E
Sbjct: 79 VKGKEGDEEEEIAYSLTPPSKLLISGKPTC-LSSIVKGALHPSSLDMWSSSKKWFNEDKE 137
Query: 115 -SAIEKAFGDAYIDLASKDQQFNKI--FNEGMACNAKFLTREILAGYKHGFDSLKSLVDV 171
+ E A G+++ D +KD + + + F + MA +++ + +L K F+ L+SLVDV
Sbjct: 138 QTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMF-KLVLQENKRVFEGLESLVDV 196
Query: 172 AGGIGGLISEIVKSYPHIKGINFDLPHVITTAPVYDGVTHVSGDMFHTIPNADALLLKWV 231
GG GG+ I + +PH+K FD P V+ + + V GDMF +IP+ADA+LLKWV
Sbjct: 197 GGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPSADAVLLKWV 256
Query: 232 LHNWSDEACERTELEWKN-IPEKGGSPRYRIIKI 264
LH+W+DE + K I KG + II I
Sbjct: 257 LHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDI 290
>pdb|3GWZ|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GXO|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
Length = 369
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 97 PYMVNSWHFLSQCVKEGGSAIEKAFGDAYIDLASKDQQFNKIFNEGMACNAKFLTREILA 156
P+ +W L+ V+ G ++ + A G ++ L +D + ++FN + ++ A
Sbjct: 137 PWHWRAWEQLTHSVRTGEASFDVANGTSFWQLTHEDPKARELFNRAXGSVSLTEAGQVAA 196
Query: 157 GYKHGFDSLKSLVDVAGGIGGLISEIVKSYPHIKGINFDLPHV-------ITTAPVYDGV 209
Y F + VD+ GG G L + ++ ++P ++G + P V +T + D
Sbjct: 197 AYD--FSGAATAVDIGGGRGSLXAAVLDAFPGLRGTLLERPPVAEEARELLTGRGLADRC 254
Query: 210 THVSGDMFHTIPN-ADALLLKWVLHNWSDEACER 242
+ GD F TIP+ AD L+K VLH+W D+ R
Sbjct: 255 EILPGDFFETIPDGADVYLIKHVLHDWDDDDVVR 288
>pdb|1QZZ|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Methionine (Sam)
pdb|1R00|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Homocystein (Sah)
Length = 374
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 24/171 (14%)
Query: 90 VFLVENHPYMVNSWHFLS--------------QCVKEGGSAIEKAFGDAYIDLASKDQQF 135
+ L + HP +W L+ V+ G A +G + + S D
Sbjct: 96 MLLADGHPAQQRAWLDLNGAVSHADLAFTGLLDVVRTGRPAYAGRYGRPFWEDLSADVAL 155
Query: 136 NKIFNEGMACNAKFLTREILAGYKHGFDSLKSLVDVAGGIGGLISEIVKSYPHIKGINFD 195
F+ M+C+ Y + +++ ++DV GG GG+++ I PH++G +
Sbjct: 156 ADSFDALMSCDEDLAYEAPADAYD--WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVE 213
Query: 196 LP-------HVITTAPVYDGVTHVSGDMFHTIP-NADALLLKWVLHNWSDE 238
L A + D VT GD F +P AD +LL +VL NWSDE
Sbjct: 214 LAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSFVLLNWSDE 264
>pdb|4A6D|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam
pdb|4A6E|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam And
N-Acetylserotonin
Length = 353
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 84/194 (43%), Gaps = 23/194 (11%)
Query: 62 SDGGEPLYGLTH-SSRWLVTGSDSNQLGPVFLVENHPYMVNSWHFLSQCVKEGGSAIEKA 120
+ GG+ Y T SS +L T S ++Q + + Y W L+ V+EG + +
Sbjct: 77 TRGGKAFYRNTELSSDYLTTVSPTSQCSMLKYMGRTSY--RCWGHLADAVREGRNQYLET 134
Query: 121 FGDAYIDLAS-------KDQQFNKIFNEGMACNAKFLTREILAGYKHGFDSLKSLVDVAG 173
FG +L + + QF + E + N R +L + L + D+ G
Sbjct: 135 FGVPAEELFTAIYRSEGERLQFMQALQEVWSVNG----RSVLTAFDLSVFPL--MCDLGG 188
Query: 174 GIGGLISEIVKSYPHIKGINFDLPHVITTAPVY------DGVTHVSGDMFHT-IPNADAL 226
G G L E + YP K FD+P V+ TA + + + GD F +P AD
Sbjct: 189 GAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLY 248
Query: 227 LLKWVLHNWSDEAC 240
+L VLH+W+D C
Sbjct: 249 ILARVLHDWADGKC 262
>pdb|3LST|A Chain A, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
pdb|3LST|B Chain B, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
Length = 348
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 10/125 (8%)
Query: 123 DAYIDLASKDQQFNKIFNEGMACNAKFLTREILAGYKHGFDSLKSLVDVAGGIGGLISEI 182
DAY D D + ++ EG + ++ F + ++ DV GG GG + +
Sbjct: 148 DAYFD---GDAEVEALYYEGXETVSA--AEHLILARAGDFPATGTVADVGGGRGGFLLTV 202
Query: 183 VKSYPHIKGINFDLPHVITT----APVYDGV-THVSGDMFHTIPNADALLLKWVLHNWSD 237
++ +P ++G+ D V+ AP G V GD +P+AD +LK +LHNW D
Sbjct: 203 LREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREVPHADVHVLKRILHNWGD 262
Query: 238 EACER 242
E R
Sbjct: 263 EDSVR 267
>pdb|1TW2|A Chain A, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW2|B Chain B, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW3|A Chain A, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
pdb|1TW3|B Chain B, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
Length = 360
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 78/188 (41%), Gaps = 26/188 (13%)
Query: 91 FLVENHPYMVNSWHFLSQCV--------------KEGGSAIEKAFGDA-YIDLASKDQQF 135
L ++HP +WH L+Q V + G E +G Y DLA +
Sbjct: 98 LLADDHPAAQRAWHDLTQAVARADISFTRLPDAIRTGRPTYESIYGKPFYEDLAGR-PDL 156
Query: 136 NKIFNEGMACNAKFLTREILAGYKHGFDSLKSLVDVAGGIGGLISEIVKSYPHIKGINFD 195
F+ +AC+ A Y + +++ ++DV GG GG + I + PH+ +
Sbjct: 157 RASFDSLLACDQDVAFDAPAAAYD--WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLE 214
Query: 196 LPHVITTAPVY-------DGVTHVSGDMFHTIPN-ADALLLKWVLHNWSDEACERTELEW 247
+ + TA Y D V V GD F +P ADA++L +VL NW D R
Sbjct: 215 MAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIILSFVLLNWPDHDAVRILTRC 274
Query: 248 KNIPEKGG 255
E GG
Sbjct: 275 AEALEPGG 282
>pdb|1XDS|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDS|B Chain B, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDU|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With Sinefungin (Sfg)
Length = 374
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 69/170 (40%), Gaps = 24/170 (14%)
Query: 91 FLVENHPYMVNSWHFLS--------------QCVKEGGSAIEKAFGDAYIDLASKDQQFN 136
L + HP +W L+ V+ G A +G + + S D
Sbjct: 97 LLADGHPAQQRAWLDLNGAVSHADLAFTGLLDVVRTGRPAYAGRYGRPFWEDLSADVALA 156
Query: 137 KIFNEGMACNAKFLTREILAGYKHGFDSLKSLVDVAGGIGGLISEIVKSYPHIKGINFDL 196
F+ +C+ Y + +++ ++DV GG GG ++ I PH++G +L
Sbjct: 157 DSFDALXSCDEDLAYEAPADAYD--WSAVRHVLDVGGGNGGXLAAIALRAPHLRGTLVEL 214
Query: 197 P-------HVITTAPVYDGVTHVSGDMFHTIP-NADALLLKWVLHNWSDE 238
A + D VT GD F +P AD +LL +VL NWSDE
Sbjct: 215 AGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSFVLLNWSDE 264
>pdb|1X19|A Chain A, Crystal Structure Of Bchu Involved In Bacteriochlorophyll
C Biosynthesis
pdb|1X1A|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Methionine
pdb|1X1B|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine
pdb|1X1C|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn2+
pdb|1X1D|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn-Bacteriopheophorbide D
Length = 359
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
Query: 136 NKIFNEGMACNAKFLTREILAGYKHGFDSLKSLVDVAGGIGGLISEIVKSYPHIKGINFD 195
N F E NAKF + +L K D +K ++DV GGIG + + ++K +P + +
Sbjct: 164 NLYFEEIHRSNAKFAIQLLLEEAK--LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILN 221
Query: 196 LPHVITTAP-------VYDGVTHVSGDMF-HTIPNADALLLKWVLHNWSDE 238
LP I V D + ++ D++ + P ADA+L +L++ +++
Sbjct: 222 LPGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEADAVLFCRILYSANEQ 272
>pdb|2IP2|A Chain A, Structure Of The Pyocyanin Biosynthetic Protein Phzm
pdb|2IP2|B Chain B, Structure Of The Pyocyanin Biosynthetic Protein Phzm
Length = 334
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 60/150 (40%), Gaps = 14/150 (9%)
Query: 102 SWHFLSQCVKEGGSAIEKAFGDAYIDLASKDQQFNKIFNEGM-ACNAKFLTREILAGYKH 160
+W + + G E AFG+ + + + F M A N F L ++
Sbjct: 109 AWTPACEALLSGTPGFELAFGEDFYSYLKRCPDAGRRFLLAMKASNLAFHEIPRLLDFRG 168
Query: 161 GFDSLKSLVDVAGGIGGLISEIVKSYPHIKGINFDLPHVITTAP-------VYDGVTHVS 213
+S VDV GG G L I+++ P +G+ D + A + V+ V
Sbjct: 169 -----RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVG 223
Query: 214 GDMFHTIP-NADALLLKWVLHNWSDEACER 242
GDM +P N D LL ++ + + A R
Sbjct: 224 GDMLQEVPSNGDIYLLSRIIGDLDEAASLR 253
>pdb|3MCZ|A Chain A, The Structure Of An O-Methyltransferase Family Protein
From Burkholderia Thailandensis.
pdb|3MCZ|B Chain B, The Structure Of An O-Methyltransferase Family Protein
From Burkholderia Thailandensis
Length = 352
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 61/134 (45%), Gaps = 12/134 (8%)
Query: 65 GEPLYGLTHSSRWLVTGSDSNQLGPVFLVENHPYMVNSWHFLSQCVKEGGSAIEKAFGDA 124
G+ + R+L T S ++ +GP+ VE+ ++W L + ++ EK
Sbjct: 90 GDAFRNTALTERYLTTTS-ADYIGPI--VEHQYLQWDNWPRLGEILRS-----EKPLAFQ 141
Query: 125 YIDLASKDQQFNKIFNEGMACNAKFLTREILAGYKHG-FDSLKSLVDVAGGIGGLISEIV 183
+ D + FN+ + + + G F ++++D+AGG G +++++
Sbjct: 142 QESRFAHDTRARDAFND---AXVRLSQPXVDVVSELGVFARARTVIDLAGGHGTYLAQVL 198
Query: 184 KSYPHIKGINFDLP 197
+ +P + G +DLP
Sbjct: 199 RRHPQLTGQIWDLP 212
>pdb|1MQP|A Chain A, The Crystal Structure Of Alpha-D-Glucuronidase From
Bacillus Stearothermophilus T-6
Length = 679
Score = 27.3 bits (59), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 68 LYGLTHSSRWLVTGSDSNQLGPVFLVENHPYMVNSWHFLSQCVKEGGSAIEKAFGD 123
LYG+ H R L G + QL + +N M+N W + ++ G + F D
Sbjct: 115 LYGVFHFLRLLQMGENIAQLSIIEQPKNRLRMINHWDNMDGSIERGYAGRSIFFVD 170
>pdb|1K9E|A Chain A, Crystal Structure Of A Mutated Family-67
Alpha-D-Glucuronidase (E285n) From Bacillus
Stearothermophilus T-6, Complexed With 4-O-Methyl-
Glucuronic Acid
pdb|1K9F|A Chain A, Crystal Structure Of A Mutated Family-67
Alpha-D-Glucuronidase (E285n) From Bacillus
Stearothermophilus T-6, Complexed With Aldotetraouronic
Acid
Length = 679
Score = 27.3 bits (59), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 68 LYGLTHSSRWLVTGSDSNQLGPVFLVENHPYMVNSWHFLSQCVKEGGSAIEKAFGD 123
LYG+ H R L G + QL + +N M+N W + ++ G + F D
Sbjct: 115 LYGVFHFLRLLQMGENIAQLSIIEQPKNRLRMINHWDNMDGSIERGYAGRSIFFVD 170
>pdb|1MQR|A Chain A, The Crystal Structure Of Alpha-D-Glucuronidase (E386q)
From Bacillus Stearothermophilus T-6
Length = 679
Score = 27.3 bits (59), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 68 LYGLTHSSRWLVTGSDSNQLGPVFLVENHPYMVNSWHFLSQCVKEGGSAIEKAFGD 123
LYG+ H R L G + QL + +N M+N W + ++ G + F D
Sbjct: 115 LYGVFHFLRLLQMGENIAQLSIIEQPKNRLRMINHWDNMDGSIERGYAGRSIFFVD 170
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 27.3 bits (59), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 109 CVKEGGSAIEKAFGDAYIDLASKDQQFNKIFNEGMACN 146
C++ GG A DA ++LA K +++ N G CN
Sbjct: 249 CLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCN 286
>pdb|1K9D|A Chain A, The 1.7 A Crystal Structure Of Alpha-D-Glucuronidase, A
Family-67 Glycoside Hydrolase From Bacillus
Stearothermophilus T-1
pdb|1L8N|A Chain A, The 1.5a Crystal Structure Of Alpha-d-glucuronidase From
Bacillus Stearothermophilus T-1, Complexed With
4-o-methyl-glucuronic Acid And Xylotriose
pdb|1MQQ|A Chain A, The Crystal Structure Of Alpha-D-Glucuronidase From
Bacillus Stearothermophilus T-1 Complexed With
Glucuronic Acid
Length = 679
Score = 27.3 bits (59), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 68 LYGLTHSSRWLVTGSDSNQLGPVFLVENHPYMVNSWHFLSQCVKEGGSAIEKAFGD 123
LYG+ H R L G + QL + +N M+N W + ++ G + F D
Sbjct: 115 LYGVFHFLRLLQMGENIAQLSIIEQPKNRLRMINHWDNMDGSIERGYAGRSIFFVD 170
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 27.3 bits (59), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 109 CVKEGGSAIEKAFGDAYIDLASKDQQFNKIFNEGMACN 146
C++ GG A DA ++LA K +++ N G CN
Sbjct: 249 CLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCN 286
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.139 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,661,690
Number of Sequences: 62578
Number of extensions: 350894
Number of successful extensions: 792
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 731
Number of HSP's gapped (non-prelim): 37
length of query: 276
length of database: 14,973,337
effective HSP length: 97
effective length of query: 179
effective length of database: 8,903,271
effective search space: 1593685509
effective search space used: 1593685509
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)