BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>046385
MAMADEEVDIKIGVRRILRKQLIMLVKKLLKGSTKRQRVSTSSLTGSLYIQELLNGSPIF
CYDLMRMDKNGFISLCQLFKEKGWLSDSKHLTVEEKMAMFLFTISHNLRNRFIKIRFQHS
GHTVHRYFHEVLSAMMKFSKEMITPPSFTDNSRGIRNTRLRQIFKRSPVVPLNLQKMSRM
PQFLTDQMGKSKGHHQDFGGSRCPINDIVGTGLGPSRQ

High Scoring Gene Products

Symbol, full name Information P value
AT5G41980 protein from Arabidopsis thaliana 1.8e-17
AT5G28730 protein from Arabidopsis thaliana 5.0e-11
AT1G43722 protein from Arabidopsis thaliana 1.2e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046385
        (218 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2165775 - symbol:AT5G41980 species:3702 "Arabi...   217  1.8e-17   1
TAIR|locus:2184226 - symbol:AT5G28730 "AT5G28730" species...   159  5.0e-11   1
TAIR|locus:504956234 - symbol:AT1G43722 "AT1G43722" speci...   124  1.2e-05   1


>TAIR|locus:2165775 [details] [associations]
            symbol:AT5G41980 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0016788 "hydrolase
            activity, acting on ester bonds" evidence=IEA] EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB017067 InterPro:IPR026103
            PANTHER:PTHR22930 UniGene:At.21383 UniGene:At.70296 EMBL:BT004620
            EMBL:AK227532 IPI:IPI00538888 RefSeq:NP_199013.1 UniGene:At.71790
            PRIDE:Q9FHY5 DNASU:834203 EnsemblPlants:AT5G41980.1 GeneID:834203
            KEGG:ath:AT5G41980 TAIR:At5g41980 eggNOG:NOG274281
            HOGENOM:HOG000237477 InParanoid:Q9FHY5 OMA:VAMFINT PhylomeDB:Q9FHY5
            ProtClustDB:CLSN2686422 Genevestigator:Q9FHY5 Uniprot:Q9FHY5
        Length = 374

 Score = 217 (81.4 bits), Expect = 1.8e-17, P = 1.8e-17
 Identities = 44/118 (37%), Positives = 73/118 (61%)

Query:    34 TKRQRVSTSSLT-GSLYIQELLNGSPIFCYDLMRMDKNGFISLCQLFKEKGWLSDSKHLT 92
             T  + VS  S++ G+ ++ ++LNG    C++  RMDK  F  LC L + +G L  +  + 
Sbjct:    14 TLPKEVSKISISDGNKFVYQILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIK 73

Query:    93 VEEKMAMFLFTISHNLRNRFIKIRFQHSGHTVHRYFHEVLSAMMKFSKEMITPPSFTD 150
             +E ++A+FLF I HNLR R ++  F +SG T+ R+F+ VL+A++  SK+   P S +D
Sbjct:    74 IEAQLAIFLFIIGHNLRTRAVQELFCYSGETISRHFNNVLNAVIAISKDFFQPNSNSD 131


>TAIR|locus:2184226 [details] [associations]
            symbol:AT5G28730 "AT5G28730" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 InterPro:IPR026103 PANTHER:PTHR22930
            IPI:IPI00520579 RefSeq:NP_198225.1 UniGene:At.55079
            EnsemblPlants:AT5G28730.1 GeneID:832985 KEGG:ath:AT5G28730
            OMA:EANMEEC PhylomeDB:F4KA06 Uniprot:F4KA06
        Length = 296

 Score = 159 (61.0 bits), Expect = 5.0e-11, P = 5.0e-11
 Identities = 37/112 (33%), Positives = 59/112 (52%)

Query:    50 IQELLNGSPIFCYDLMRMDKNGFISLCQLFKEKGWLSDSKHLTVEEKMAMFLFTISHNLR 109
             I   +  + + C  L+RM    F  LC++   K  L  S +++++E +A+FL   + N  
Sbjct:    13 IAHQIYSNEVSCQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDT 72

Query:   110 NRFIKIRFQHSGHTVHRYFHEVLSAMMKFSKEMITPPSFTDNSRGIRNTRLR 161
              R I +RF H+  T+ R FH+VL AM + + E I P    +  R I N RL+
Sbjct:    73 QRDIALRFGHAQETIWRKFHDVLKAMERLAVEYIRPRK-VEELRAISN-RLQ 122


>TAIR|locus:504956234 [details] [associations]
            symbol:AT1G43722 "AT1G43722" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 InterPro:IPR026103 PANTHER:PTHR22930
            IPI:IPI00546258 RefSeq:NP_683376.1 UniGene:At.52016
            EnsemblPlants:AT1G43722.1 GeneID:840961 KEGG:ath:AT1G43722
            OMA:LNIMAIC Uniprot:F4ICS6
        Length = 324

 Score = 124 (48.7 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 29/87 (33%), Positives = 46/87 (52%)

Query:    61 CYDLMRMDKNGFISLCQLFKEKGWLSDSKHLTVEEKMAMFLFTISHNLRNRFIKIRFQHS 120
             C  L+RM    F +LC + +    L  + ++++EE +AMFL    HN   R + +RF  +
Sbjct:    66 CLQLLRMSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVYRDVGLRFGRN 125

Query:   121 GHTVHRYFHEVLSAMMKFSKEMITPPS 147
               TV R F EVL+A    + + I  P+
Sbjct:   126 QETVQRKFREVLTATELLACDYIRTPT 152


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.137   0.403    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      218       218   0.00091  112 3  11 22  0.45    32
                                                     32  0.39    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  590 (63 KB)
  Total size of DFA:  162 KB (2097 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.03u 0.10s 20.13t   Elapsed:  00:00:01
  Total cpu time:  20.03u 0.10s 20.13t   Elapsed:  00:00:01
  Start:  Sat May 11 09:25:03 2013   End:  Sat May 11 09:25:04 2013

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