Query 046386
Match_columns 609
No_of_seqs 179 out of 562
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 11:34:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046386.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046386hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00207 hypothetical protein; 100.0 1.9E-78 4E-83 679.8 35.8 511 34-604 22-570 (591)
2 PF06813 Nodulin-like: Nodulin 100.0 1.5E-56 3.3E-61 454.1 23.9 245 38-284 1-250 (250)
3 TIGR00890 2A0111 Oxalate/Forma 99.9 2.7E-20 5.9E-25 195.2 25.2 371 37-582 1-376 (377)
4 KOG2504 Monocarboxylate transp 99.8 6.1E-20 1.3E-24 204.9 21.9 430 32-588 38-476 (509)
5 TIGR00892 2A0113 monocarboxyla 99.8 6.4E-17 1.4E-21 178.5 26.7 416 38-604 17-442 (455)
6 PLN00028 nitrate transmembrane 99.7 7.2E-16 1.6E-20 171.2 26.8 392 38-591 35-436 (476)
7 PRK11551 putative 3-hydroxyphe 99.7 4.2E-15 9.1E-20 160.0 29.3 380 36-587 11-395 (406)
8 TIGR00893 2A0114 d-galactonate 99.7 4.6E-15 1E-19 155.7 25.3 381 55-587 10-398 (399)
9 PRK09556 uhpT sugar phosphate 99.7 1.1E-14 2.5E-19 160.8 28.3 399 54-588 44-449 (467)
10 PRK03699 putative transporter; 99.7 4E-14 8.7E-19 152.7 30.4 376 36-593 3-385 (394)
11 PRK11273 glpT sn-glycerol-3-ph 99.7 2.1E-14 4.6E-19 158.0 28.6 414 38-602 27-449 (452)
12 PRK11663 regulatory protein Uh 99.7 3.1E-14 6.7E-19 155.9 26.9 130 53-188 37-168 (434)
13 PRK09705 cynX putative cyanate 99.6 3.7E-13 8E-18 145.5 29.1 362 45-587 14-380 (393)
14 PRK03545 putative arabinose tr 99.6 1.7E-12 3.6E-17 139.6 29.8 368 37-587 6-379 (390)
15 PRK12307 putative sialic acid 99.6 2E-12 4.3E-17 140.1 28.2 145 37-187 15-162 (426)
16 TIGR00879 SP MFS transporter, 99.5 1.4E-12 3E-17 141.0 26.1 127 58-187 47-183 (481)
17 TIGR00895 2A0115 benzoate tran 99.5 1.2E-12 2.6E-17 138.6 23.5 145 37-187 14-161 (398)
18 TIGR00891 2A0112 putative sial 99.5 4.9E-12 1.1E-16 134.7 27.9 149 34-188 6-157 (405)
19 PRK05122 major facilitator sup 99.5 5.6E-12 1.2E-16 135.5 28.3 140 424-589 251-390 (399)
20 TIGR02332 HpaX 4-hydroxyphenyl 99.5 3.2E-12 6.8E-17 139.3 24.8 144 38-187 6-152 (412)
21 TIGR00712 glpT glycerol-3-phos 99.5 3.1E-12 6.8E-17 140.1 23.3 147 38-187 25-174 (438)
22 TIGR00897 2A0118 polyol permea 99.5 6.7E-11 1.5E-15 128.1 32.8 376 38-587 15-400 (402)
23 TIGR00881 2A0104 phosphoglycer 99.5 1.7E-12 3.7E-17 136.2 19.7 357 54-544 10-374 (379)
24 cd06174 MFS The Major Facilita 99.5 1.8E-11 4E-16 126.6 25.2 331 54-585 14-349 (352)
25 PRK12382 putative transporter; 99.5 6.3E-11 1.4E-15 127.3 29.8 136 426-587 253-388 (392)
26 PRK15034 nitrate/nitrite trans 99.4 4.1E-11 8.8E-16 132.5 28.1 130 54-186 49-181 (462)
27 TIGR00894 2A0114euk Na(+)-depe 99.4 5.3E-12 1.1E-16 139.1 20.4 379 68-596 70-458 (465)
28 PRK11646 multidrug resistance 99.4 6.3E-11 1.4E-15 128.6 27.9 144 36-187 10-155 (400)
29 TIGR00898 2A0119 cation transp 99.4 1.7E-11 3.7E-16 136.3 22.9 128 53-186 103-235 (505)
30 PRK03893 putative sialic acid 99.4 1.6E-10 3.5E-15 127.8 30.1 149 56-210 37-187 (496)
31 TIGR01299 synapt_SV2 synaptic 99.4 5.4E-11 1.2E-15 138.5 26.5 145 37-187 164-311 (742)
32 TIGR00896 CynX cyanate transpo 99.4 7.6E-11 1.6E-15 124.9 25.0 331 56-544 17-350 (355)
33 TIGR00885 fucP L-fucose:H+ sym 99.4 1.6E-10 3.4E-15 126.3 27.3 366 59-573 23-397 (410)
34 PRK10091 MFS transport protein 99.4 3.7E-10 8.1E-15 121.3 28.6 125 57-187 21-147 (382)
35 PF07690 MFS_1: Major Facilita 99.4 1.4E-11 3.1E-16 128.3 15.9 127 58-190 15-144 (352)
36 PRK09874 drug efflux system pr 99.3 5E-10 1.1E-14 120.2 28.2 135 428-588 264-398 (408)
37 TIGR00900 2A0121 H+ Antiporter 99.3 2.6E-10 5.7E-15 119.2 25.3 336 63-543 23-364 (365)
38 PRK10213 nepI ribonucleoside t 99.3 1.1E-09 2.4E-14 118.6 30.9 143 39-187 19-164 (394)
39 PRK09528 lacY galactoside perm 99.3 1.2E-10 2.6E-15 126.7 23.3 179 381-585 216-400 (420)
40 TIGR00903 2A0129 major facilit 99.3 1.1E-09 2.4E-14 118.0 29.6 350 56-584 8-361 (368)
41 TIGR00710 efflux_Bcr_CflA drug 99.3 2E-09 4.4E-14 114.1 30.6 143 38-187 5-149 (385)
42 PRK03633 putative MFS family t 99.3 1.1E-09 2.5E-14 117.4 28.5 336 58-580 25-364 (381)
43 PRK10504 putative transporter; 99.3 1.2E-09 2.6E-14 120.4 28.7 132 54-191 25-158 (471)
44 TIGR00889 2A0110 nucleoside tr 99.3 6E-10 1.3E-14 121.9 24.9 189 382-591 202-405 (418)
45 PRK10489 enterobactin exporter 99.3 6E-10 1.3E-14 121.0 24.6 336 58-544 36-376 (417)
46 PRK10054 putative transporter; 99.3 1.3E-09 2.8E-14 118.1 26.1 131 51-187 20-152 (395)
47 TIGR00886 2A0108 nitrite extru 99.3 4.9E-10 1.1E-14 118.4 21.5 129 52-186 14-145 (366)
48 PRK11652 emrD multidrug resist 99.3 7.7E-09 1.7E-13 111.2 30.7 155 381-542 200-360 (394)
49 PRK15402 multidrug efflux syst 99.2 7.4E-09 1.6E-13 111.9 29.6 140 39-186 12-156 (406)
50 TIGR00899 2A0120 sugar efflux 99.2 5.9E-09 1.3E-13 110.3 27.0 176 384-586 195-372 (375)
51 TIGR00887 2A0109 phosphate:H+ 99.2 5.4E-09 1.2E-13 116.8 27.4 117 70-186 52-170 (502)
52 TIGR00711 efflux_EmrB drug res 99.2 2.8E-09 6.1E-14 117.2 24.1 384 57-543 20-411 (485)
53 PRK10077 xylE D-xylose transpo 99.2 1E-08 2.2E-13 112.9 28.3 128 56-183 26-172 (479)
54 PRK11043 putative transporter; 99.2 1.6E-08 3.4E-13 109.1 28.9 143 38-186 5-149 (401)
55 TIGR00902 2A0127 phenyl propri 99.2 1.6E-08 3.6E-13 108.7 28.4 173 381-581 198-372 (382)
56 PRK09952 shikimate transporter 99.2 2.8E-08 6E-13 109.3 30.1 133 430-587 294-432 (438)
57 TIGR00883 2A0106 metabolite-pr 99.2 9.8E-09 2.1E-13 108.4 24.7 158 382-544 211-377 (394)
58 PRK10473 multidrug efflux syst 99.1 2.5E-08 5.5E-13 107.1 28.3 125 54-184 18-144 (392)
59 PRK10406 alpha-ketoglutarate t 99.1 3.7E-08 7.9E-13 107.9 29.6 139 34-172 16-165 (432)
60 PRK14995 methyl viologen resis 99.1 2.3E-08 4.9E-13 111.8 27.2 395 38-542 4-413 (495)
61 PRK15075 citrate-proton sympor 99.1 7.7E-08 1.7E-12 105.4 30.9 126 55-182 31-168 (434)
62 PRK10642 proline/glycine betai 99.1 5.5E-08 1.2E-12 108.4 29.2 111 427-543 291-405 (490)
63 TIGR00882 2A0105 oligosacchari 99.1 5.3E-08 1.2E-12 105.0 27.9 180 380-586 207-393 (396)
64 PRK08633 2-acyl-glycerophospho 99.1 6.7E-08 1.5E-12 118.0 32.1 125 59-187 30-159 (1146)
65 PRK10133 L-fucose transporter; 99.1 1.4E-07 3E-12 104.0 31.0 127 58-187 45-173 (438)
66 COG2223 NarK Nitrate/nitrite t 99.0 1.3E-08 2.7E-13 109.4 19.9 180 382-592 212-405 (417)
67 PRK11128 putative 3-phenylprop 99.0 1.4E-07 3.1E-12 101.3 27.8 158 380-544 197-357 (382)
68 PRK06814 acylglycerophosphoeth 99.0 1.3E-07 2.7E-12 116.0 29.8 159 380-543 217-397 (1140)
69 PRK11010 ampG muropeptide tran 99.0 5.6E-07 1.2E-11 100.7 30.7 179 381-587 215-402 (491)
70 PRK11102 bicyclomycin/multidru 99.0 2.5E-07 5.4E-12 98.4 26.5 125 56-186 8-134 (377)
71 PRK11902 ampG muropeptide tran 98.9 6.1E-07 1.3E-11 97.1 28.8 115 68-186 28-149 (402)
72 COG2271 UhpC Sugar phosphate p 98.9 1.9E-07 4.1E-12 100.6 22.1 377 57-600 47-446 (448)
73 KOG2532 Permease of the major 98.9 9.3E-08 2E-12 106.3 19.6 364 66-586 65-445 (466)
74 PRK15011 sugar efflux transpor 98.9 1.8E-06 4E-11 93.2 28.2 141 417-585 246-388 (393)
75 PRK15403 multidrug efflux syst 98.8 1.7E-05 3.7E-10 86.6 32.4 126 55-186 32-159 (413)
76 TIGR00901 2A0125 AmpG-related 98.8 2.2E-06 4.7E-11 90.8 24.6 123 61-187 10-139 (356)
77 TIGR00792 gph sugar (Glycoside 98.7 9.5E-07 2.1E-11 96.0 21.5 159 380-544 214-382 (437)
78 COG0738 FucP Fucose permease [ 98.6 2.3E-05 5.1E-10 84.3 27.7 348 59-544 33-386 (422)
79 TIGR02718 sider_RhtX_FptX side 98.6 1.8E-05 3.8E-10 85.2 26.8 177 381-583 201-386 (390)
80 KOG2533 Permease of the major 98.6 1.5E-05 3.2E-10 89.4 25.5 121 65-192 72-195 (495)
81 PRK09584 tppB putative tripept 98.6 0.00019 4.1E-09 80.7 34.6 120 457-587 350-478 (500)
82 PRK11195 lysophospholipid tran 98.6 7E-05 1.5E-09 81.2 29.1 137 39-186 5-143 (393)
83 COG2814 AraJ Arabinose efflux 98.5 0.00023 5E-09 77.3 31.5 372 38-593 14-391 (394)
84 TIGR01272 gluP glucose/galacto 98.5 2.2E-05 4.7E-10 82.8 22.4 154 383-544 135-292 (310)
85 TIGR00710 efflux_Bcr_CflA drug 98.5 2.1E-06 4.5E-11 91.1 13.8 172 389-587 5-179 (385)
86 PRK10504 putative transporter; 98.4 1.5E-06 3.3E-11 95.8 13.0 174 389-589 11-186 (471)
87 PRK10213 nepI ribonucleoside t 98.4 2.3E-06 5E-11 92.8 13.6 147 407-580 39-187 (394)
88 PRK09669 putative symporter Ya 98.4 5.4E-05 1.2E-09 83.3 24.2 159 380-544 221-390 (444)
89 PRK09848 glucuronide transport 98.4 7.9E-05 1.7E-09 81.9 24.0 156 381-542 221-388 (448)
90 TIGR00924 yjdL_sub1_fam amino 98.3 0.0017 3.7E-08 72.6 34.2 125 61-191 33-165 (475)
91 cd06174 MFS The Major Facilita 98.3 9E-06 1.9E-10 84.1 13.6 150 411-587 22-173 (352)
92 PF07690 MFS_1: Major Facilita 98.3 1.8E-06 3.9E-11 89.9 7.7 150 413-588 22-172 (352)
93 PF03825 Nuc_H_symport: Nucleo 98.3 0.00031 6.7E-09 76.9 25.4 160 381-545 200-367 (400)
94 PRK10091 MFS transport protein 98.2 8.2E-06 1.8E-10 87.7 12.6 170 388-583 3-173 (382)
95 PRK11663 regulatory protein Uh 98.2 1E-05 2.2E-10 88.8 13.3 148 411-584 46-194 (434)
96 TIGR00900 2A0121 H+ Antiporter 98.2 4.4E-06 9.5E-11 87.3 9.7 137 425-587 37-178 (365)
97 TIGR00924 yjdL_sub1_fam amino 98.2 1.1E-05 2.5E-10 89.9 13.5 169 389-583 11-187 (475)
98 PRK10054 putative transporter; 98.2 1.2E-05 2.6E-10 87.3 12.1 175 388-591 7-185 (395)
99 PRK11102 bicyclomycin/multidru 98.2 1.6E-05 3.5E-10 84.5 12.4 155 406-587 9-165 (377)
100 PRK15402 multidrug efflux syst 98.1 3.1E-05 6.8E-10 83.7 14.4 170 388-584 9-184 (406)
101 PRK03699 putative transporter; 98.1 3.1E-05 6.8E-10 83.6 14.1 169 389-583 8-178 (394)
102 PRK15403 multidrug efflux syst 98.1 2.9E-05 6.3E-10 84.8 13.8 153 406-585 34-188 (413)
103 TIGR00880 2_A_01_02 Multidrug 98.1 1.7E-05 3.7E-10 70.6 9.9 132 429-586 5-136 (141)
104 PRK10207 dipeptide/tripeptide 98.1 0.0088 1.9E-07 67.2 33.7 117 64-185 40-161 (489)
105 TIGR01299 synapt_SV2 synaptic 98.1 3.3E-05 7.1E-10 90.7 14.6 187 384-584 159-351 (742)
106 TIGR00893 2A0114 d-galactonate 98.1 1.1E-05 2.3E-10 84.7 9.6 147 414-587 20-168 (399)
107 PRK09874 drug efflux system pr 98.1 6.5E-05 1.4E-09 80.6 15.0 173 387-588 13-193 (408)
108 PRK11043 putative transporter; 98.1 3.4E-05 7.4E-10 83.1 12.7 155 406-587 24-180 (401)
109 PRK03545 putative arabinose tr 98.1 3.8E-05 8.2E-10 82.7 12.7 150 411-586 32-182 (390)
110 PRK11652 emrD multidrug resist 98.0 6.1E-05 1.3E-09 81.0 14.1 167 391-584 11-179 (394)
111 TIGR00895 2A0115 benzoate tran 98.0 2.7E-05 5.8E-10 82.4 11.1 148 411-585 40-189 (398)
112 TIGR00892 2A0113 monocarboxyla 98.0 4.4E-05 9.6E-10 84.5 13.3 148 411-585 42-191 (455)
113 PRK10473 multidrug efflux syst 98.0 4.2E-05 9E-10 82.2 12.4 156 406-588 21-178 (392)
114 TIGR02332 HpaX 4-hydroxyphenyl 98.0 5.2E-05 1.1E-09 82.8 12.7 144 424-587 45-188 (412)
115 TIGR00711 efflux_EmrB drug res 98.0 2.7E-05 5.9E-10 85.7 10.5 152 410-588 24-177 (485)
116 TIGR00891 2A0112 putative sial 98.0 0.00011 2.4E-09 78.2 14.6 144 412-579 36-180 (405)
117 PF13347 MFS_2: MFS/sugar tran 98.0 0.00034 7.3E-09 76.6 18.8 156 381-542 218-384 (428)
118 TIGR00805 oat sodium-independe 98.0 0.00013 2.9E-09 84.4 15.7 157 29-186 22-227 (633)
119 PRK10429 melibiose:sodium symp 97.9 0.0017 3.7E-08 72.2 23.8 62 481-542 325-393 (473)
120 TIGR00788 fbt folate/biopterin 97.9 0.0043 9.3E-08 69.2 26.7 63 482-544 353-415 (468)
121 TIGR00806 rfc RFC reduced fola 97.9 0.0011 2.5E-08 73.6 21.5 127 54-187 41-170 (511)
122 PRK09584 tppB putative tripept 97.9 0.00014 3E-09 81.9 14.7 174 383-583 15-196 (500)
123 TIGR00712 glpT glycerol-3-phos 97.9 0.00018 3.9E-09 79.0 15.2 149 414-588 52-206 (438)
124 TIGR00886 2A0108 nitrite extru 97.9 9.4E-05 2E-09 78.0 12.3 141 389-536 2-146 (366)
125 TIGR00881 2A0104 phosphoglycer 97.9 2.4E-05 5.2E-10 82.1 7.7 148 413-587 20-170 (379)
126 TIGR00890 2A0111 Oxalate/Forma 97.9 9E-05 2E-09 77.6 12.0 150 411-588 26-177 (377)
127 PRK11551 putative 3-hydroxyphe 97.9 0.0001 2.2E-09 79.4 12.7 146 413-584 40-186 (406)
128 KOG0569 Permease of the major 97.9 0.028 6.1E-07 62.9 31.5 150 61-213 41-200 (485)
129 PF06609 TRI12: Fungal trichot 97.9 0.0001 2.2E-09 84.1 12.4 178 385-590 37-219 (599)
130 COG2807 CynX Cyanate permease 97.9 0.0086 1.9E-07 64.1 25.9 168 384-579 204-376 (395)
131 PF05977 MFS_3: Transmembrane 97.9 0.0046 1E-07 70.1 25.4 101 68-170 39-142 (524)
132 PF06609 TRI12: Fungal trichot 97.8 0.0055 1.2E-07 70.2 25.6 132 37-176 40-175 (599)
133 KOG2563 Permease of the major 97.8 0.0041 8.9E-08 68.2 23.1 173 4-182 5-191 (480)
134 PRK14995 methyl viologen resis 97.8 0.00017 3.8E-09 80.6 13.0 151 411-588 29-182 (495)
135 TIGR00879 SP MFS transporter, 97.8 0.00028 6.1E-09 76.2 14.3 133 424-582 73-211 (481)
136 PRK03893 putative sialic acid 97.8 0.00017 3.7E-09 79.9 12.5 150 389-543 21-171 (496)
137 PRK15462 dipeptide/tripeptide 97.8 0.081 1.8E-06 59.6 33.4 132 54-190 24-161 (493)
138 PF01306 LacY_symp: LacY proto 97.7 0.00031 6.8E-09 76.8 13.2 187 381-593 213-405 (412)
139 PRK12307 putative sialic acid 97.7 0.00039 8.6E-09 75.3 13.8 127 412-543 42-169 (426)
140 PRK11195 lysophospholipid tran 97.7 0.00016 3.4E-09 78.4 10.5 148 387-542 2-150 (393)
141 PRK11646 multidrug resistance 97.7 0.00029 6.3E-09 76.6 12.6 144 415-585 38-182 (400)
142 PF11700 ATG22: Vacuole efflux 97.7 0.044 9.5E-07 61.5 30.0 184 380-587 273-467 (477)
143 PRK10489 enterobactin exporter 97.7 8E-05 1.7E-09 80.9 8.0 174 382-583 11-192 (417)
144 PRK09528 lacY galactoside perm 97.7 0.00016 3.4E-09 78.7 10.3 176 383-587 5-190 (420)
145 PRK09705 cynX putative cyanate 97.7 0.00093 2E-08 72.3 15.4 148 390-543 8-159 (393)
146 PRK09556 uhpT sugar phosphate 97.7 0.00039 8.4E-09 77.1 12.5 175 388-585 25-209 (467)
147 KOG0254 Predicted transporter 97.6 0.055 1.2E-06 61.0 29.6 133 74-213 89-225 (513)
148 PRK08633 2-acyl-glycerophospho 97.6 0.00058 1.3E-08 83.7 14.0 154 383-542 4-165 (1146)
149 TIGR00882 2A0105 oligosacchari 97.6 0.00047 1E-08 74.3 11.2 168 387-585 1-180 (396)
150 PRK10207 dipeptide/tripeptide 97.6 0.001 2.2E-08 74.7 14.1 134 416-575 43-181 (489)
151 PRK12382 putative transporter; 97.5 0.00073 1.6E-08 72.6 12.4 153 384-543 11-175 (392)
152 PTZ00207 hypothetical protein; 97.5 0.00076 1.7E-08 77.2 12.9 166 392-587 29-204 (591)
153 PRK06814 acylglycerophosphoeth 97.5 0.00089 1.9E-08 82.4 14.3 162 382-544 5-172 (1140)
154 PRK11273 glpT sn-glycerol-3-ph 97.5 0.0018 3.8E-08 71.5 14.9 138 424-588 65-208 (452)
155 PRK11010 ampG muropeptide tran 97.5 0.0012 2.6E-08 74.0 13.8 130 436-586 59-193 (491)
156 COG2814 AraJ Arabinose efflux 97.4 0.0022 4.8E-08 69.7 14.0 175 389-589 14-189 (394)
157 TIGR00897 2A0118 polyol permea 97.4 0.0014 3E-08 71.1 12.5 152 386-543 12-169 (402)
158 PLN00028 nitrate transmembrane 97.4 0.0028 6E-08 70.7 15.0 158 412-587 60-218 (476)
159 TIGR00899 2A0120 sugar efflux 97.4 0.0019 4.1E-08 68.3 12.7 147 415-586 25-174 (375)
160 PRK03633 putative MFS family t 97.3 0.00094 2E-08 71.7 10.2 151 386-542 4-156 (381)
161 PRK15462 dipeptide/tripeptide 97.3 0.0025 5.4E-08 71.7 13.5 138 418-581 40-182 (493)
162 TIGR00889 2A0110 nucleoside tr 97.3 0.0029 6.3E-08 69.4 13.3 148 39-191 211-369 (418)
163 TIGR00901 2A0125 AmpG-related 97.3 0.003 6.5E-08 66.8 13.0 160 412-586 12-176 (356)
164 TIGR00896 CynX cyanate transpo 97.3 0.0025 5.4E-08 67.5 12.4 142 413-580 25-167 (355)
165 TIGR00898 2A0119 cation transp 97.3 0.0022 4.8E-08 71.4 12.5 131 424-584 129-260 (505)
166 TIGR00894 2A0114euk Na(+)-depe 97.2 0.0019 4.1E-08 71.3 11.4 138 425-587 79-218 (465)
167 TIGR01301 GPH_sucrose GPH fami 97.2 0.24 5.2E-06 55.7 28.0 93 481-592 381-475 (477)
168 PRK15034 nitrate/nitrite trans 97.2 0.0055 1.2E-07 68.3 14.7 185 385-587 31-231 (462)
169 PRK10077 xylE D-xylose transpo 97.2 0.008 1.7E-07 66.2 15.8 141 425-584 58-211 (479)
170 PF00083 Sugar_tr: Sugar (and 97.2 5.4E-07 1.2E-11 98.5 -17.8 112 72-186 44-157 (451)
171 KOG3764 Vesicular amine transp 97.1 0.013 2.8E-07 63.5 15.7 55 132-186 159-215 (464)
172 TIGR00887 2A0109 phosphate:H+ 97.1 0.0052 1.1E-07 68.8 13.6 109 425-539 59-174 (502)
173 TIGR00903 2A0129 major facilit 97.1 0.0046 1E-07 66.8 12.4 148 412-587 15-164 (368)
174 PRK10642 proline/glycine betai 97.0 0.01 2.2E-07 66.4 14.8 135 52-190 263-401 (490)
175 PRK05122 major facilitator sup 97.0 0.0062 1.3E-07 65.5 11.8 124 414-542 42-174 (399)
176 TIGR00805 oat sodium-independe 96.9 0.0015 3.3E-08 75.7 7.2 164 413-583 58-276 (633)
177 PRK15011 sugar efflux transpor 96.9 0.011 2.5E-07 63.7 13.6 172 387-585 14-191 (393)
178 TIGR01301 GPH_sucrose GPH fami 96.9 0.0091 2E-07 66.9 12.8 173 407-588 23-218 (477)
179 PRK11128 putative 3-phenylprop 96.9 0.016 3.5E-07 62.2 14.0 140 410-576 26-167 (382)
180 KOG0255 Synaptic vesicle trans 96.8 0.17 3.6E-06 56.9 22.3 123 58-187 101-226 (521)
181 PRK09952 shikimate transporter 96.8 0.055 1.2E-06 59.6 17.6 128 435-577 73-209 (438)
182 TIGR00883 2A0106 metabolite-pr 96.7 0.027 5.9E-07 59.2 14.1 126 438-581 51-184 (394)
183 TIGR00902 2A0127 phenyl propri 96.7 0.037 8E-07 59.5 15.4 145 39-193 208-355 (382)
184 KOG2533 Permease of the major 96.6 0.026 5.6E-07 63.6 13.4 141 425-586 84-225 (495)
185 TIGR02718 sider_RhtX_FptX side 96.5 0.065 1.4E-06 57.6 15.8 151 37-191 209-364 (390)
186 TIGR00880 2_A_01_02 Multidrug 96.5 0.057 1.2E-06 47.6 12.6 97 90-192 15-112 (141)
187 PF05977 MFS_3: Transmembrane 96.5 0.019 4.1E-07 65.2 11.3 152 382-544 4-167 (524)
188 TIGR00792 gph sugar (Glycoside 96.4 0.015 3.2E-07 63.2 9.9 148 424-586 37-192 (437)
189 PRK11462 putative transporter; 96.4 0.089 1.9E-06 58.5 16.2 60 482-541 320-386 (460)
190 PRK11902 ampG muropeptide tran 96.4 0.038 8.3E-07 59.7 13.0 127 436-583 46-177 (402)
191 COG2271 UhpC Sugar phosphate p 96.4 0.018 4E-07 62.8 9.9 149 413-591 54-206 (448)
192 KOG3764 Vesicular amine transp 96.3 0.011 2.4E-07 64.0 7.8 142 425-593 109-252 (464)
193 KOG0253 Synaptic vesicle trans 96.3 0.49 1.1E-05 51.3 19.8 100 3-102 40-142 (528)
194 PF03092 BT1: BT1 family; Int 96.3 1.5 3.2E-05 48.7 24.8 108 61-170 12-127 (433)
195 TIGR00926 2A1704 Peptide:H+ sy 96.3 0.046 9.9E-07 63.7 13.2 140 427-586 28-180 (654)
196 PRK10406 alpha-ketoglutarate t 96.3 0.095 2E-06 57.4 15.2 99 433-533 70-177 (432)
197 TIGR00885 fucP L-fucose:H+ sym 96.2 0.063 1.4E-06 58.8 13.4 115 426-542 38-156 (410)
198 COG3104 PTR2 Dipeptide/tripept 96.2 0.039 8.4E-07 61.4 11.3 177 384-593 25-207 (498)
199 PF03825 Nuc_H_symport: Nucleo 96.2 0.14 2.9E-06 56.3 15.6 146 39-192 210-363 (400)
200 KOG0255 Synaptic vesicle trans 95.7 0.088 1.9E-06 59.2 12.2 128 426-583 122-250 (521)
201 PRK15075 citrate-proton sympor 95.7 0.24 5.2E-06 54.2 15.3 99 435-535 65-172 (434)
202 TIGR00806 rfc RFC reduced fola 95.7 0.091 2E-06 58.8 11.7 156 414-595 52-210 (511)
203 KOG0252 Inorganic phosphate tr 95.6 0.37 8E-06 53.4 15.6 180 382-593 304-502 (538)
204 KOG4686 Predicted sugar transp 95.4 0.08 1.7E-06 55.2 9.3 90 448-544 323-416 (459)
205 KOG0254 Predicted transporter 94.8 0.21 4.6E-06 56.3 11.6 133 425-583 92-225 (513)
206 TIGR00788 fbt folate/biopterin 94.8 0.39 8.4E-06 53.6 13.4 175 388-587 26-208 (468)
207 PRK09669 putative symporter Ya 94.6 0.13 2.9E-06 56.4 9.2 149 424-587 47-203 (444)
208 PF03209 PUCC: PUCC protein; 94.3 10 0.00022 41.7 29.6 153 380-543 200-364 (403)
209 KOG2504 Monocarboxylate transp 94.3 0.19 4.2E-06 56.9 9.6 136 428-587 83-220 (509)
210 KOG2615 Permease of the major 94.3 0.2 4.3E-06 54.3 9.0 108 427-541 73-181 (451)
211 PRK10133 L-fucose transporter; 94.2 0.27 5.9E-06 54.3 10.6 144 389-539 27-176 (438)
212 PRK09848 glucuronide transport 94.2 0.47 1E-05 52.2 12.1 117 66-186 256-381 (448)
213 COG2807 CynX Cyanate permease 94.0 0.76 1.6E-05 49.6 12.8 114 446-583 68-181 (395)
214 COG2270 Permeases of the major 93.4 0.64 1.4E-05 51.0 11.0 159 380-544 244-405 (438)
215 PF13347 MFS_2: MFS/sugar tran 93.1 0.11 2.5E-06 56.7 5.0 149 427-590 42-200 (428)
216 COG2211 MelB Na+/melibiose sym 91.6 2.8 6.1E-05 46.9 13.4 114 424-539 270-393 (467)
217 PRK10429 melibiose:sodium symp 90.2 2.7 5.8E-05 46.8 12.0 49 426-475 46-95 (473)
218 KOG2532 Permease of the major 89.9 2.8 6.1E-05 47.0 11.7 131 435-588 82-216 (466)
219 PF00854 PTR2: POT family; In 89.7 1.2 2.6E-05 47.8 8.4 102 460-582 4-117 (372)
220 KOG0252 Inorganic phosphate tr 89.1 2.4 5.2E-05 47.3 10.0 156 426-603 87-259 (538)
221 TIGR01272 gluP glucose/galacto 87.9 8 0.00017 40.6 13.0 114 69-190 173-287 (310)
222 PF05978 UNC-93: Ion channel r 87.4 4.1 9E-05 38.8 9.4 65 477-541 86-150 (156)
223 TIGR00939 2a57 Equilibrative N 86.8 15 0.00032 41.0 14.7 52 131-186 105-156 (437)
224 PRK11462 putative transporter; 84.7 7.6 0.00017 43.2 11.3 49 426-475 49-98 (460)
225 KOG2325 Predicted transporter/ 83.7 51 0.0011 37.3 17.1 57 488-544 396-452 (488)
226 PF11700 ATG22: Vacuole efflux 83.3 24 0.00051 39.8 14.5 159 22-187 267-432 (477)
227 KOG1330 Sugar transporter/spin 83.3 0.19 4.1E-06 55.7 -2.2 88 481-588 122-209 (493)
228 KOG3098 Uncharacterized conser 83.1 8.7 0.00019 43.0 10.7 150 36-186 238-407 (461)
229 PF00083 Sugar_tr: Sugar (and 82.9 0.12 2.6E-06 56.5 -4.0 104 428-533 48-155 (451)
230 COG0477 ProP Permeases of the 82.6 10 0.00022 36.9 10.0 112 425-542 42-158 (338)
231 COG0738 FucP Fucose permease [ 80.8 7.3 0.00016 42.8 8.8 155 424-584 46-206 (422)
232 PF03209 PUCC: PUCC protein; 80.8 18 0.00039 39.8 11.8 148 426-595 19-183 (403)
233 PRK03612 spermidine synthase; 79.6 28 0.00061 39.6 13.5 57 483-540 113-169 (521)
234 PF06813 Nodulin-like: Nodulin 78.5 78 0.0017 32.6 15.1 142 396-543 8-158 (250)
235 KOG0569 Permease of the major 77.8 25 0.00054 39.8 12.1 80 427-510 65-146 (485)
236 KOG2615 Permease of the major 77.4 1.2E+02 0.0026 33.5 18.1 73 472-544 344-416 (451)
237 COG2223 NarK Nitrate/nitrite t 76.9 21 0.00045 39.4 10.8 119 416-540 42-167 (417)
238 KOG3762 Predicted transporter 76.7 5.6 0.00012 45.2 6.5 181 383-590 366-549 (618)
239 PF03092 BT1: BT1 family; Int 74.8 26 0.00057 38.7 11.3 130 438-589 40-176 (433)
240 COG2270 Permeases of the major 73.9 35 0.00077 37.8 11.6 94 66-165 280-374 (438)
241 COG2211 MelB Na+/melibiose sym 72.6 36 0.00078 38.3 11.6 81 426-507 52-143 (467)
242 COG1575 MenA 1,4-dihydroxy-2-n 69.8 67 0.0015 34.0 12.1 55 143-209 130-188 (303)
243 KOG1330 Sugar transporter/spin 66.6 6 0.00013 44.1 3.9 105 61-171 55-161 (493)
244 PF01770 Folate_carrier: Reduc 64.2 2.4E+02 0.0051 31.4 18.3 149 381-542 240-399 (412)
245 KOG2816 Predicted transporter 58.7 86 0.0019 35.3 11.3 119 65-190 268-389 (463)
246 PF05631 DUF791: Protein of un 58.7 50 0.0011 35.8 9.0 87 53-151 53-140 (354)
247 PF11947 DUF3464: Protein of u 51.7 6.3 0.00014 37.5 0.7 42 483-524 105-147 (153)
248 PRK00972 tetrahydromethanopter 49.8 48 0.001 34.1 6.6 54 388-442 62-115 (292)
249 PF05631 DUF791: Protein of un 49.8 2.6E+02 0.0056 30.4 12.6 89 427-518 70-159 (354)
250 PF01306 LacY_symp: LacY proto 48.1 1.1E+02 0.0025 33.8 9.9 60 133-193 313-375 (412)
251 KOG3098 Uncharacterized conser 47.8 4.6E+02 0.0099 29.6 14.8 90 90-186 67-157 (461)
252 COG3104 PTR2 Dipeptide/tripept 39.3 3.3E+02 0.0071 31.0 11.8 92 66-162 53-147 (498)
253 PF05978 UNC-93: Ion channel r 38.4 2.1E+02 0.0046 27.2 8.9 61 132-192 89-150 (156)
254 KOG3810 Micronutrient transpor 36.5 1.7E+02 0.0037 32.0 8.6 112 459-583 305-416 (433)
255 PF00976 ACTH_domain: Corticot 35.0 16 0.00036 26.2 0.5 14 11-24 12-25 (39)
256 KOG2563 Permease of the major 33.3 2E+02 0.0043 32.4 8.7 89 446-536 100-196 (480)
257 TIGR01113 mtrE N5-methyltetrah 33.2 1.5E+02 0.0033 30.4 7.2 19 424-442 91-109 (283)
258 PF01770 Folate_carrier: Reduc 31.2 1.7E+02 0.0037 32.4 7.9 127 40-170 248-379 (412)
259 PF03137 OATP: Organic Anion T 29.8 18 0.00038 41.5 0.0 75 41-119 7-84 (539)
260 COG0477 ProP Permeases of the 28.7 4.2E+02 0.0091 25.2 9.7 112 60-175 23-139 (338)
261 PF10283 zf-CCHH: Zinc-finger 27.5 23 0.0005 23.5 0.3 10 559-568 2-12 (26)
262 PF04206 MtrE: Tetrahydrometha 27.5 1.6E+02 0.0034 30.2 6.1 19 424-442 91-109 (269)
263 KOG0253 Synaptic vesicle trans 25.8 6.6E+02 0.014 28.1 10.9 103 425-535 112-219 (528)
264 KOG2816 Predicted transporter 25.5 1E+03 0.022 26.8 22.7 118 424-546 279-396 (463)
265 PF08566 Pam17: Mitochondrial 21.4 66 0.0014 31.2 2.2 18 35-52 35-52 (173)
266 PF03222 Trp_Tyr_perm: Tryptop 21.0 2.8E+02 0.0061 30.4 7.3 29 479-507 332-360 (394)
267 COG4603 ABC-type uncharacteriz 20.3 7.4E+02 0.016 27.0 10.1 105 484-596 115-223 (356)
No 1
>PTZ00207 hypothetical protein; Provisional
Probab=100.00 E-value=1.9e-78 Score=679.78 Aligned_cols=511 Identities=19% Similarity=0.214 Sum_probs=407.1
Q ss_pred cCCchHHHHHHHHHHHHhcCCccccccccHHHHHHhCCChhhhhHHHHhhhcccchhhhhhhhhhhhhHHHHHHHHHHHH
Q 046386 34 GQSRKWMILVATIWIQAFTGTNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKLFGWLSGLALMYFPLWVVLFMAAFMG 113 (609)
Q Consensus 34 ~~~~Rw~~lvas~~v~l~~Gt~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~G~~sGll~~~~P~~~vllig~~~~ 113 (609)
+|.+||+++++++|+++|+|+.|.|++|++++|+++|+||+|+|.++..+.....+++++|.++|++|+|.++++|.++.
T Consensus 22 ~e~~Rw~~lva~~~~~~~~g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~vllig~ll~ 101 (591)
T PTZ00207 22 NEPRRFALLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRPIFVLSMTVF 101 (591)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 37889999999999999999999999999999999999999988887543322233348899999999999999999999
Q ss_pred HHHHHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcCCCCcchhhhhhhhhhhhHHHHHHHHhhhCCC
Q 046386 114 FFGYGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFPANRALALSLTVSFNGVSAAIYALAGNAINPS 193 (609)
Q Consensus 114 ~~GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP~~RG~avgl~k~~~GLSaaI~s~i~~~~f~~ 193 (609)
++||.+.|+.+++.+..++|.++++.++.|+|++++++++++++++|||++||.++|+.+++.|++++++++++..++.+
T Consensus 102 ~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~ 181 (591)
T PTZ00207 102 CLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFSD 181 (591)
T ss_pred HHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988877666789999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCC---CCCcch-----------------hhHHHHHHHHHHHHHHH
Q 046386 194 SHALYLLLNALIPLITSLAALIPILRQPSLDPLPPEG---VKRDSF-----------------IFLILNIIAILTGVYLL 253 (609)
Q Consensus 194 d~~~fLllla~~p~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----------------~F~~~~~i~v~l~~yl~ 253 (609)
|.+.+++++++.+.+++++.++ ++|.|+++....++ +++++. .|.+++.+++++++|++
T Consensus 182 ~~~~~fl~l~vl~~vv~ll~~~-~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~ 260 (591)
T PTZ00207 182 NTSAYFFFLMSFALVVGILAIV-FMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLP 260 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHh-heeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHH
Confidence 9999999999999999998855 55666554332111 122333 68899999999999999
Q ss_pred HHhhccC---cchhhHHHHHH-HH-HHHHhh-cccccccccccccccccccccccCCCCccccCCCchhHHHHHhhHhhh
Q 046386 254 LFGAHSS---DLTVSRLLFGG-AL-FLLMFP-LCIPGIVYARDWFKRTIHSSFRLDGSGFLLIDVDDLELHKELLMREAE 327 (609)
Q Consensus 254 v~~~~~~---~~~~~~~~~~g-~~-~ll~~p-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (609)
+++++++ .....+..+.+ ++ ++++.| +++|+... ++..+ ++ ++++|..+. . +
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~-----~~~~~-----~~-------~~~~~~~~~-~--~-- 318 (591)
T PTZ00207 261 LQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTF-----DGKRP-----HD-------DSDGKAKEH-V--E-- 318 (591)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHh-----ccCCc-----CC-------Ccccccccc-c--c--
Confidence 9999884 12233333333 34 666678 78887531 11100 00 000000000 0 0
Q ss_pred hccCCCCCCCCCcccccccccccccccccccCCCcccccccccchhhcccCchHHHHhhhHHHHHHHHHHHhhcccccee
Q 046386 328 ASNNGKELDQPLLSTDDISMTYSLTRTKSFEKGGCCETIIGKDQLAMLGEEHSARLLVLRLDFWLYYIAYFCGGAIGLVY 407 (609)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Fwll~~~~~~g~g~Glm~ 407 (609)
++.+. . + +++.+.++.. |...|+.++ |++|.+++.|||++|++++||.|+|+++
T Consensus 319 ------~~~~~-------------~-~---~~~~~~~~~~--~~~~P~~~~-t~~q~l~~~d~Wll~~~~~cg~g~gl~~ 372 (591)
T PTZ00207 319 ------AGEEV-------------S-A---AEDKVVETDV--DYIAPQFQE-TFIEGLKTARLWCLLWSIFCCVGAHFVI 372 (591)
T ss_pred ------ccccc-------------c-c---cccccccccc--cCCCCCCcc-hHHHHHhchhHHHHHHHHHHhhCchhee
Confidence 00000 0 0 0000000000 111123445 9999999999999999999999999999
Q ss_pred ecchhHHHHHh-cCCccc--ch-hhHHHHHhhhhhhhhccchhhhhhhcc----cchhHHHHHHHHHHHHHHHHHHhcCC
Q 046386 408 SNNLGQIAQSL-GESSRT--TT-LLTLYSSFSFFGRLLSAAPDYMRAKVY----FARTGWLTIALLPTPVAFCLLATSGN 479 (609)
Q Consensus 408 I~n~g~I~~al-~~~~~~--~~-~VSl~Si~n~~GRl~~g~SD~l~~~~~----~~R~~~l~~~~~~~~~~~ll~~~~~~ 479 (609)
|||++||+|++ |++.+. ++ +||++|+||++||+++|+-|.+.+|++ +||+.++.+.++ |++++++++ ...
T Consensus 373 ~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~-~~~ 450 (591)
T PTZ00207 373 IFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLF-LTL 450 (591)
T ss_pred eecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHH-HHC
Confidence 99999999999 663333 44 899999999999999996555556555 899999999887 888888887 445
Q ss_pred c-chhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHH-HHHHHHHhhccCCCCCCcCcccCCC
Q 046386 480 A-VALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVY-GFLAAIVYDSNVSSGIGIGNVVSDS 557 (609)
Q Consensus 480 ~-~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~-~~i~g~iyD~~~~~~~~~~~~~~~~ 557 (609)
| ..||++++++|+|||++|+++|++++|+|| ||||+|||++.++.|+|++++ .+++|++||+|++|++ +
T Consensus 451 p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~--------~ 521 (591)
T PTZ00207 451 PKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLG--------Q 521 (591)
T ss_pred CccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCC--------C
Confidence 6 899999999999999999999999999999 999999999999999999999 5799999999998743 4
Q ss_pred cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH--Hhhhcc
Q 046386 558 VVCMGRHCYFLTFVLWGCVSVVGLAASVLLFLRTRHAYDCF--ERKRLS 604 (609)
Q Consensus 558 ~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l~~r~r~~y~~~--~~~~~~ 604 (609)
..|.|++||+.+|+|++++|++|+++++++++||||+|++. .|+|+|
T Consensus 522 ~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~r~~y~~~~~~~~~~~ 570 (591)
T PTZ00207 522 DVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQYRRLCLKALEERRRIR 570 (591)
T ss_pred CeeCCceeeHhHHHHHHHHHHHHHHHHhheeeehHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999855 555554
No 2
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=100.00 E-value=1.5e-56 Score=454.15 Aligned_cols=245 Identities=39% Similarity=0.661 Sum_probs=222.4
Q ss_pred hHHHHHHHHHHHHhcCCccccccccHHHHHHhCCChhhhhHHHHhhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q 046386 38 KWMILVATIWIQAFTGTNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKLFGWLSGLALMYFPLWVVLFMAAFMGFFGY 117 (609)
Q Consensus 38 Rw~~lvas~~v~l~~Gt~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~G~~sGll~~~~P~~~vllig~~~~~~GY 117 (609)
||++|++++|+|+++|++|.||+||||||+++||||+|+|+|++++|+|.++|+++|+++|+.|||+++++|++++++||
T Consensus 1 rW~~l~a~~~v~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G~~~G~l~d~~gp~~~l~iG~~~~~~GY 80 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFGILAGLLYDRFGPWVVLLIGAVLGFVGY 80 (250)
T ss_pred ChhhHHHHHHHHHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhccHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCc-chhHHHHHHHHHhhcchhhhhhHHHHHHHHhcCCCCcchhhhhhhhhhhhHHHHHHHHhhhCCCChh
Q 046386 118 GLQWLVISHVIS-LPYILVFFLCLLSGLSITWFNTVCFVLCIQNFPANRALALSLTVSFNGVSAAIYALAGNAINPSSHA 196 (609)
Q Consensus 118 ~~~~l~~~~~~~-~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP~~RG~avgl~k~~~GLSaaI~s~i~~~~f~~d~~ 196 (609)
+++|++++++++ +|+|++|++++++|+|++|+||++++||+||||+|||+|+|++|+++||||+||||+|+++|++|++
T Consensus 81 ~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~ 160 (250)
T PF06813_consen 81 GLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPS 160 (250)
T ss_pred HHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCCChH
Confidence 999999999987 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcch----hhHHHHHHH
Q 046386 197 LYLLLNALIPLITSLAALIPILRQPSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLT----VSRLLFGGA 272 (609)
Q Consensus 197 ~fLllla~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~----~~~~~~~g~ 272 (609)
+|++|+|+.|.++++++++++++.|+.+. .+++++|+++|..++.+++++++|+++.+++++... .......++
T Consensus 161 ~fll~la~~~~~v~l~~~~~vr~~~~~~~--~~~~~~~~~~F~~~~~i~l~la~yLl~~~i~~~~~~~s~~~~~~~~~il 238 (250)
T PF06813_consen 161 SFLLFLAVLPAVVCLVAMFFVRPVPPSPS--RTRQPSESKRFLFFFAIALALAIYLLVISILQNFVKLSRAARVIFAVIL 238 (250)
T ss_pred HHHHHHHHHHHHHHHHHhhheeccCCccc--cccCcchhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHH
Confidence 99999999999999999776655544322 223457889999999999999999999999885432 222334555
Q ss_pred HHHHHhhccccc
Q 046386 273 LFLLMFPLCIPG 284 (609)
Q Consensus 273 ~~ll~~p~~~p~ 284 (609)
++++++|+.+|+
T Consensus 239 ~llL~~Pl~i~~ 250 (250)
T PF06813_consen 239 LLLLLLPLAIPV 250 (250)
T ss_pred HHHHHhhhhccC
Confidence 677778988874
No 3
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.87 E-value=2.7e-20 Score=195.22 Aligned_cols=371 Identities=18% Similarity=0.243 Sum_probs=250.4
Q ss_pred chHHHHHHHHHHHHhcCCccccccccHHHHHHhCCChhhhhHHHHhhhcccch-hhhhhhhhhhhhHHHHHHHHHHHHHH
Q 046386 37 RKWMILVATIWIQAFTGTNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKLF-GWLSGLALMYFPLWVVLFMAAFMGFF 115 (609)
Q Consensus 37 ~Rw~~lvas~~v~l~~Gt~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~-G~~sGll~~~~P~~~vllig~~~~~~ 115 (609)
+||..+++.+....+.|..|.++.+.|.+++.+|+|..|.+.+..+..+|..+ ..+.|.+.|+.++..++.++.++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~ 80 (377)
T TIGR00890 1 RWWYVLVGTVIMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGL 80 (377)
T ss_pred CeEEEeHHHHHHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHH
Confidence 47889999999999999999999999999999999999999999999998844 56679999999877777777776666
Q ss_pred HHHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcCCCCcchhhhhhhhhhhhHHHHHHHHhhhCCCCh
Q 046386 116 GYGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFPANRALALSLTVSFNGVSAAIYALAGNAINPSSH 195 (609)
Q Consensus 116 GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP~~RG~avgl~k~~~GLSaaI~s~i~~~~f~~d~ 195 (609)
++.+.... ..+|.++...++.|.+.+..+.++.....++||++||.+.++.....++++.+...+...+....
T Consensus 81 ~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~- 153 (377)
T TIGR00890 81 GFTFYAIA------DSLAALYLTYGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVINLE- 153 (377)
T ss_pred HHHHHHHH------HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhcc-
Confidence 66443221 12466656666788887777778888889999999999999999999998887666644321100
Q ss_pred hHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHHHHHHHHHH
Q 046386 196 ALYLLLNALIPLITSLAALIPILRQPSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRLLFGGALFL 275 (609)
Q Consensus 196 ~~fLllla~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~~~~g~~~l 275 (609)
+....|.....+.++.++ ...
T Consensus 154 -------------------------------------~~~~~f~~~~~~~~~~~~----------------------~~~ 174 (377)
T TIGR00890 154 -------------------------------------GVPAAFIYMGIIFLLVIV----------------------LGA 174 (377)
T ss_pred -------------------------------------cHHHHHHHHHHHHHHHHH----------------------HHH
Confidence 000111110000000000 000
Q ss_pred HHhhcccccccccccccccccccccccCCCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCcccccccccccccccc
Q 046386 276 LMFPLCIPGIVYARDWFKRTIHSSFRLDGSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMTYSLTRTK 355 (609)
Q Consensus 276 l~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (609)
... + ++++++++ + +++ . +
T Consensus 175 ~~~----~---------------------------~~~~~~~~------~--------~~~---------------~-~- 192 (377)
T TIGR00890 175 FLI----G---------------------------YPPGQLIK------T--------NIE---------------V-S- 192 (377)
T ss_pred Hhe----e---------------------------cCchhccc------c--------Ccc---------------c-c-
Confidence 000 0 00000000 0 000 0 0
Q ss_pred cccCCCcccccccccchhhcccCchHHHHhhhHHHHHHHHHHHhhccccceeecchhHHHHHhcCCc-ccchhhHHHHHh
Q 046386 356 SFEKGGCCETIIGKDQLAMLGEEHSARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQSLGESS-RTTTLLTLYSSF 434 (609)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~al~~~~-~~~~~VSl~Si~ 434 (609)
+ .+.+.++.++++++|.+++.+++.......+.+...+..++++.+. ......++.++.
T Consensus 193 ------------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (377)
T TIGR00890 193 ------------V--------KDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIF 252 (377)
T ss_pred ------------h--------hhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 0 0113467889999999888777655444444455555666666533 244677888999
Q ss_pred hhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCc--chhHHHHHHHHhhhcchhhhHHHHHHHhhCC
Q 046386 435 SFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNA--VALQAGTSLIGLSSGFIFAAAVSITSELFGP 511 (609)
Q Consensus 435 n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~--~~l~~~s~liG~~yG~~f~~~P~i~se~FG~ 511 (609)
+.+||+..| ++|++.+ | ..+.+..+++.++.++....+.. ..+.....+.|+++|..++++|+++.|.++.
T Consensus 253 ~~~~~~~~g~l~dr~g~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~ 326 (377)
T TIGR00890 253 NGGGRPFLGALSDKIGR-----Q-KTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGP 326 (377)
T ss_pred HHHHHHHHHHHHHHHhh-----h-hhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhh
Confidence 999999998 5665432 2 23333444444554444322222 2233456788999999999999999999999
Q ss_pred CCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHH
Q 046386 512 NSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLA 582 (609)
Q Consensus 512 k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~ 582 (609)
++.|+.+|+......+|..+++.++|.++|..+ |+..|.+.+++++++++
T Consensus 327 ~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g---------------------~~~~f~~~~~~~~~~~~ 376 (377)
T TIGR00890 327 ANSAANYGFLYTAKAVAGIFGGLIASHALTEIG---------------------FEYTFIVTGAFALTSLA 376 (377)
T ss_pred hhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhc---------------------hhhHHHHHHHHHHHhcc
Confidence 999999999999999999999999999998654 88999888877766543
No 4
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.85 E-value=6.1e-20 Score=204.94 Aligned_cols=430 Identities=19% Similarity=0.170 Sum_probs=276.8
Q ss_pred cccCCchHHHHHHHHHHH-HhcCCccccccccHHHHHHhCCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHH
Q 046386 32 MAGQSRKWMILVATIWIQ-AFTGTNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMA 109 (609)
Q Consensus 32 m~~~~~Rw~~lvas~~v~-l~~Gt~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig 109 (609)
.|+----|.+.++++++. .+-|.++.|+++=+.+++.+|-+.+|...|+..-.--. ..|-+++.+++.++.+.+.++|
T Consensus 38 ~PdGG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G 117 (509)
T KOG2504|consen 38 LPDGGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAG 117 (509)
T ss_pred CCCCCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHH
Confidence 343334599999998886 55599999999999999999999999555554443322 2266678888888888999999
Q ss_pred HHHHHHHHHHHHHHHhhcCcchhHHHHH-HHHHhhcchhhhhhHHHHHHHHhcCCCCcchhhhhhhhhhhhHHHHHHHHh
Q 046386 110 AFMGFFGYGLQWLVISHVISLPYILVFF-LCLLSGLSITWFNTVCFVLCIQNFPANRALALSLTVSFNGVSAAIYALAGN 188 (609)
Q Consensus 110 ~~~~~~GY~~~~l~~~~~~~~~~~~l~~-~~~l~G~g~~~~~taalvT~~kNFP~~RG~avgl~k~~~GLSaaI~s~i~~ 188 (609)
+++.++|+.+...+-+ +|++.+ +.++.|.|.++.+..+++...+.|+++|+.|+|+-.+.-|+...+++.+..
T Consensus 118 ~~v~~~g~~lssF~~~------i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~ 191 (509)
T KOG2504|consen 118 GLVAALGLLLSSFATS------LWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLK 191 (509)
T ss_pred HHHHHHHHHHHHHHhh------HHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHH
Confidence 9999999977643332 466555 558899999999999999999999999999999999999999999999988
Q ss_pred hhCC--CChhHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhH
Q 046386 189 AINP--SSHALYLLLNALIPLITSLAALIPILRQPSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSR 266 (609)
Q Consensus 189 ~~f~--~d~~~fLllla~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~ 266 (609)
.+++ +....++.+.++. +-.++.+ ...++.++....+ +.. +.+.
T Consensus 192 ~l~~~~G~r~~~l~~~~~~-l~~~~~~-~~~rp~~~~~~~~--~~~-~~~~----------------------------- 237 (509)
T KOG2504|consen 192 YLLSKYGWRGALLIFGGIS-LNVLVAG-ALLRPLSPPKKPN--EEK-DLRN----------------------------- 237 (509)
T ss_pred HHHHHhCcHHHHHHHHHHH-HHHHHHH-HHcCCCCcCCCch--hhh-hhcc-----------------------------
Confidence 7764 3344444444332 1111111 1111111111110 000 0000
Q ss_pred HHHHHHHHHHHhhcccccccccccccccccccccccCCCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCccccccc
Q 046386 267 LLFGGALFLLMFPLCIPGIVYARDWFKRTIHSSFRLDGSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDIS 346 (609)
Q Consensus 267 ~~~~g~~~ll~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (609)
.....+.. +...+.+ . + +.+.+... .++.
T Consensus 238 -------------------------------~~~~~~~~-------~~~~~~~---~-~--------~~~~~~~~-~~~~ 266 (509)
T KOG2504|consen 238 -------------------------------SAASVEST-------PKPVELR---I-S--------ERDSGLKK-LSLS 266 (509)
T ss_pred -------------------------------cccccccc-------ccccccc---c-c--------cCCCCCCc-cccc
Confidence 00000000 0000000 0 0 00000000 0000
Q ss_pred ccccccccccccCCCcccccccccchhhcccCch--HHHHhhhHHHHHHHHHHHhhccccceeecchhHHHHHhcCC-cc
Q 046386 347 MTYSLTRTKSFEKGGCCETIIGKDQLAMLGEEHS--ARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQSLGES-SR 423 (609)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~al~~~-~~ 423 (609)
+ .. +. ...+ ++.+......... -+++++++.||.+.+...+....-....--+...+++.+++ .+
T Consensus 267 ~---~~-~~-~~~~-------~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~ 334 (509)
T KOG2504|consen 267 N---LA-TL-KRGP-------DKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSND 334 (509)
T ss_pred c---hh-hh-hhCC-------ccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhh
Confidence 0 00 00 0000 0000000001111 25789999999988777665422223334455566677774 45
Q ss_pred cchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHH
Q 046386 424 TTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAV 502 (609)
Q Consensus 424 ~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P 502 (609)
.+..+|++++.|.+||++.| +.|.-. +++.+...+.++...++.+......+...+...+++.|+|.|...++.|
T Consensus 335 aa~l~Siigi~~i~gRi~~G~laD~~~----~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~ 410 (509)
T KOG2504|consen 335 AAFLLSIIGVSDIIGRIILGLLADKPG----IRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTP 410 (509)
T ss_pred hHHHHHHHHHhhhhhhhhhhhhcCccc----cchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77899999999999999999 566642 3344444444444455544444344456788889999999999999999
Q ss_pred HHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHH
Q 046386 503 SITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLA 582 (609)
Q Consensus 503 ~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~ 582 (609)
.++.|+.|+++++.-||++.+.-+++.++++.++|.+||..+ -|..+|+..+...+++.+
T Consensus 411 ~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg--------------------~Y~~~f~~~g~~~~~s~~ 470 (509)
T KOG2504|consen 411 VILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITG--------------------NYDHAFYFCGLCFLLSAV 470 (509)
T ss_pred HHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccC--------------------CeeeehhhcChHHHHHHH
Confidence 999999999999999999999999999999999999999986 488899888777776666
Q ss_pred HHHHHH
Q 046386 583 ASVLLF 588 (609)
Q Consensus 583 ~sl~l~ 588 (609)
+.++..
T Consensus 471 ~~~~~~ 476 (509)
T KOG2504|consen 471 LLLILR 476 (509)
T ss_pred HHHHhH
Confidence 665555
No 5
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.77 E-value=6.4e-17 Score=178.50 Aligned_cols=416 Identities=17% Similarity=0.115 Sum_probs=242.3
Q ss_pred hHHHHHHHHHHHHh-cCCccccccccHHHHHHhCCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHH
Q 046386 38 KWMILVATIWIQAF-TGTNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFF 115 (609)
Q Consensus 38 Rw~~lvas~~v~l~-~Gt~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~ 115 (609)
||..++++++.+.. -+..+.++.+-+++++.+|.|+.+...+.....++. ..+.+.|.+.|.+++..+++++.++..+
T Consensus 17 ~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~ 96 (455)
T TIGR00892 17 GWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASL 96 (455)
T ss_pred chHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHH
Confidence 68888777776643 355677899999999999999999888877766654 4456679999998777677776655555
Q ss_pred HHHHHHHHHhhcCcchhHHHHHH-HHHhhcchhhhhhHHHHHHHHhcCCCCcchhhhhhhhhhhhHHHHHHHHhhhCCCC
Q 046386 116 GYGLQWLVISHVISLPYILVFFL-CLLSGLSITWFNTVCFVLCIQNFPANRALALSLTVSFNGVSAAIYALAGNAINPSS 194 (609)
Q Consensus 116 GY~~~~l~~~~~~~~~~~~l~~~-~~l~G~g~~~~~taalvT~~kNFP~~RG~avgl~k~~~GLSaaI~s~i~~~~f~~d 194 (609)
+..+. ..... +|.++.. .++.|.+.+.....+.....++||++||.+.|+.....++++.+...+...+...
T Consensus 97 ~~~~~--~~~~~----~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~- 169 (455)
T TIGR00892 97 GMILA--SFSSN----VIELYLTAGFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLFES- 169 (455)
T ss_pred HHHHH--HHhhh----HHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHH-
Confidence 55443 12221 3444332 2455666554444555667799999999999999999999888776664322110
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHHHHHHHHH
Q 046386 195 HALYLLLNALIPLITSLAALIPILRQPSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRLLFGGALF 274 (609)
Q Consensus 195 ~~~fLllla~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~~~~g~~~ 274 (609)
.+....|.....+.++.. +..
T Consensus 170 -------------------------------------~gwr~~f~~~~~~~~~~~----------------------v~~ 190 (455)
T TIGR00892 170 -------------------------------------FGWRGSFLILGGLLLHCC----------------------VCG 190 (455)
T ss_pred -------------------------------------hChHHHHHHHHHHHHHHH----------------------HHH
Confidence 000111111111000000 000
Q ss_pred HHHhhcccccccccccccccccccccccCCCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCccccccccccccccc
Q 046386 275 LLMFPLCIPGIVYARDWFKRTIHSSFRLDGSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMTYSLTRT 354 (609)
Q Consensus 275 ll~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (609)
.+.. +.. ... + .++++ .++ . . +++.+ . +
T Consensus 191 ~~~~----~~~------------~~~--~------~~~~~---~~~--~-~-------~~~~~--------------~-~ 218 (455)
T TIGR00892 191 ALMR----PVG------------PSQ--R------VSKSK---SKE--G-L-------PPDGS--------------T-K 218 (455)
T ss_pred HHhC----CCC------------ccc--c------ccccc---ccc--c-C-------CCCCc--------------c-c
Confidence 0000 000 000 0 00000 000 0 0 00000 0 0
Q ss_pred ccccCCCcccccccccchhhcccCchHHHHhhhHHHHHHHHHHHhhccccceeecchhHHHHHhcCCc-ccchhhHHHHH
Q 046386 355 KSFEKGGCCETIIGKDQLAMLGEEHSARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQSLGESS-RTTTLLTLYSS 433 (609)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~al~~~~-~~~~~VSl~Si 433 (609)
+ ..... ..++ . .+.-..+.+++++||.+.+..++....-.+...-..+..++++.+. ..+...++..+
T Consensus 219 ~-~~~~~------~~~~---~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~ 287 (455)
T TIGR00892 219 K-LSKKS------TAEK---I-NRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGF 287 (455)
T ss_pred c-ccccc------hhhh---h-hhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 0 00000 0000 0 0111135789999998777655433222233344556666666533 35578888899
Q ss_pred hhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCC
Q 046386 434 FSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPN 512 (609)
Q Consensus 434 ~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k 512 (609)
.+.++|++.| ++|.. +++..|...+.+..+..+++.++....++...+++...+.|+++|..+...++++.|.++.+
T Consensus 288 ~~~~~~~~~g~l~d~~--~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~ 365 (455)
T TIGR00892 288 VDIFARPSCGLIAGLK--WIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQ 365 (455)
T ss_pred HHHHHHHHHHHHhccc--ccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHH
Confidence 9999999988 56641 12112222222222222333333332344556777889999999999999999999999999
Q ss_pred CchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHH----HHHHH
Q 046386 513 SVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAA----SVLLF 588 (609)
Q Consensus 513 ~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~----sl~l~ 588 (609)
+.|+.+|++.++..+|..+++.++|.++|..+ -|+..|.+.+++++++.+. .++.+
T Consensus 366 ~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g--------------------~~~~~f~~~~~~~li~~~~~~~~~~~~~ 425 (455)
T TIGR00892 366 RFSSAVGLVTIVECCAVLIGPPLAGRLVDATK--------------------NYKYIFYASGSIVVSAGLFLAIGNYINY 425 (455)
T ss_pred HHhhHHhHHHHHHHHHHHccccceeeeehhcC--------------------CcchHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999764 3888888877776665553 34444
Q ss_pred HHHhhhHH-HHHhhhcc
Q 046386 589 LRTRHAYD-CFERKRLS 604 (609)
Q Consensus 589 ~r~r~~y~-~~~~~~~~ 604 (609)
.++||.-+ .+.|.+-|
T Consensus 426 ~~~~~~~~~~~~~~~~~ 442 (455)
T TIGR00892 426 RLLAKEQKAALEREGAR 442 (455)
T ss_pred HHHHHHHHHHHhhcccc
Confidence 55555333 44444433
No 6
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.73 E-value=7.2e-16 Score=171.18 Aligned_cols=392 Identities=14% Similarity=0.129 Sum_probs=210.8
Q ss_pred hHHHHHHHHHHHHhcCCccccccccHHHHHHhCCChhhhhHHHHhhhcccchh-hhhhhhhhhhhHHHHHHHHHHHHHHH
Q 046386 38 KWMILVATIWIQAFTGTNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKLFG-WLSGLALMYFPLWVVLFMAAFMGFFG 116 (609)
Q Consensus 38 Rw~~lvas~~v~l~~Gt~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~G-~~sGll~~~~P~~~vllig~~~~~~G 116 (609)
+|....+.....+.....|.++.+.|.+++.+|+|..|.+.+.....+|..+| ++.|.+.|.+.+..++.++.+...++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~ 114 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPA 114 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 44444444444455555678888889999999999999999888888888665 77899999987666666666555555
Q ss_pred HHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHhhhCCCCh
Q 046386 117 YGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGNAINPSSH 195 (609)
Q Consensus 117 Y~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~~~f~~d~ 195 (609)
..+.- ... .++.+.+.-++.|.+.+.. ..+.....+.|| ++||.+.|+..+...+++.+...+.
T Consensus 115 ~~~~~--~~~----s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~-------- 179 (476)
T PLN00028 115 VFCMS--LVS----SATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLM-------- 179 (476)
T ss_pred HHHHH--Hhc----CHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHH--------
Confidence 43321 111 2344444445556554432 223334568898 6799999988765555554433331
Q ss_pred hHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHHHHHHHHHH
Q 046386 196 ALYLLLNALIPLITSLAALIPILRQPSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRLLFGGALFL 275 (609)
Q Consensus 196 ~~fLllla~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~~~~g~~~l 275 (609)
|.+...+. ... ..+.......|....++.++++ +..
T Consensus 180 ----------~~i~~~~~-----~~~------~~~~~gWr~~f~i~g~l~l~~~-----------------------l~~ 215 (476)
T PLN00028 180 ----------PLVFPLIK-----DAG------APSFTAWRIAFFVPGLLHIIMG-----------------------ILV 215 (476)
T ss_pred ----------HHHHHHHH-----hcC------CcchhhhHHHHHHHHHHHHHHH-----------------------HHH
Confidence 11111110 000 0000011111211111110000 000
Q ss_pred HHhhcccccccccccccccccccccccCCCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCcccccccccccccccc
Q 046386 276 LMFPLCIPGIVYARDWFKRTIHSSFRLDGSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMTYSLTRTK 355 (609)
Q Consensus 276 l~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (609)
...+ + ++++.+. ++. + + +.+ .
T Consensus 216 ~~~~---------~---------------------~~p~~~~-~~~---~--~-----~~~---------------~--- 236 (476)
T PLN00028 216 LTLG---------Q---------------------DLPDGNY-REL---K--K-----SGT---------------M--- 236 (476)
T ss_pred HHHc---------C---------------------cCCCCch-hhH---H--h-----cCc---------------c---
Confidence 0010 0 0000000 000 0 0 000 0
Q ss_pred cccCCCcccccccccchhhcccCchHHHHhhhHHHHHHHHHHHhhccccceeecchhHHHHH-hcCCc-ccchhhHHHHH
Q 046386 356 SFEKGGCCETIIGKDQLAMLGEEHSARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQS-LGESS-RTTTLLTLYSS 433 (609)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~a-l~~~~-~~~~~VSl~Si 433 (609)
+ +++ .....++.++++.+|++++.+++..+....+.+.+....++ .+.+. .+....+++.+
T Consensus 237 --~---------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~ 299 (476)
T PLN00028 237 --P---------KDS------FSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGL 299 (476)
T ss_pred --c---------ccc------HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 0 000 01134678899999998888766544444444445555443 45533 35567888999
Q ss_pred hhhhhhhhcc-chhhhhhhccc-chhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHh----hhcchhhhHHHHHHH
Q 046386 434 FSFFGRLLSA-APDYMRAKVYF-ARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGL----SSGFIFAAAVSITSE 507 (609)
Q Consensus 434 ~n~~GRl~~g-~SD~l~~~~~~-~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~----~yG~~f~~~P~i~se 507 (609)
.+.+||++.| ++|++.+|++. .|.+.+.+.+++..+..+++...++.....+..++.++ ++|..|++.| +
T Consensus 300 ~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~ 375 (476)
T PLN00028 300 MNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVP----F 375 (476)
T ss_pred HHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCc----c
Confidence 9999999999 89999877543 24433333333333333333212222222223333444 4555555554 4
Q ss_pred hhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHH
Q 046386 508 LFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLL 587 (609)
Q Consensus 508 ~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l 587 (609)
++.++.|+++|++..+..+| +.+++.++|.+. .+ -|+.+|.+.+++.+++.++.+++
T Consensus 376 -~~~~~~g~~~g~~~~~g~lg----~~i~~~l~~~~~---~~---------------~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 376 -VSRRSLGVISGLTGAGGNVG----AVLTQLLFFTGS---SY---------------STETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred -cChhhchhhhhhhhccccHH----HHHHHHHHHhcC---Cc---------------cHhhHHHHHHHHHHHHHHHHHhe
Confidence 35689999999985544444 444456666332 11 49999999998888888888777
Q ss_pred HHHH
Q 046386 588 FLRT 591 (609)
Q Consensus 588 ~~r~ 591 (609)
+..+
T Consensus 433 ~~~~ 436 (476)
T PLN00028 433 HFPQ 436 (476)
T ss_pred eccc
Confidence 5333
No 7
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.72 E-value=4.2e-15 Score=159.99 Aligned_cols=380 Identities=14% Similarity=0.057 Sum_probs=227.7
Q ss_pred CchHHHHHHHHHHHHhcCC-ccccccccHHHHHHhCCChhhhhHHHHhhhcccch-hhhhhhhhhhhhHHHHHHHHHHHH
Q 046386 36 SRKWMILVATIWIQAFTGT-NFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKLF-GWLSGLALMYFPLWVVLFMAAFMG 113 (609)
Q Consensus 36 ~~Rw~~lvas~~v~l~~Gt-~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~-G~~sGll~~~~P~~~vllig~~~~ 113 (609)
+.+|..+..+.++..+.|. .+.++...|++++++|+|..|.+.+..+..+|..+ ..+.|.+.|+..+..++.++.++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 90 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALF 90 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Confidence 3578888888777776654 67788899999999999999999999999998744 577799999987766666666555
Q ss_pred HHHHHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHhhhCC
Q 046386 114 FFGYGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGNAINP 192 (609)
Q Consensus 114 ~~GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~~~f~ 192 (609)
.++..+... . ..++.++...++.|.+.+....+......+.|| ++||.+.|+......+++.+...+.....+
T Consensus 91 ~~~~~~~~~--~----~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 164 (406)
T PRK11551 91 GLFSLATAQ--A----WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAG 164 (406)
T ss_pred HHHHHHHHH--h----ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 555433222 1 124556666677788777777777777889998 679999999887777776665444211100
Q ss_pred CChhHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHHHHHHH
Q 046386 193 SSHALYLLLNALIPLITSLAALIPILRQPSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRLLFGGA 272 (609)
Q Consensus 193 ~d~~~fLllla~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~~~~g~ 272 (609)
. .+....| .+..++.+. ...
T Consensus 165 -----------------------------------~---~~~~~~~----~~~~~~~~~------------------~~~ 184 (406)
T PRK11551 165 -----------------------------------D---AAWRHIF----YVGGVGPLL------------------LVP 184 (406)
T ss_pred -----------------------------------c---cCHHHHH----HHHHHHHHH------------------HHH
Confidence 0 0000111 110000000 000
Q ss_pred HHHHHhhcccccccccccccccccccccccCCCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCccccccccccccc
Q 046386 273 LFLLMFPLCIPGIVYARDWFKRTIHSSFRLDGSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMTYSLT 352 (609)
Q Consensus 273 ~~ll~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (609)
+..... | +++++.++ . + .+++ .
T Consensus 185 ~~~~~l----~-----------------------------~~~~~~~~--~-~-------~~~~---------------~ 206 (406)
T PRK11551 185 LLMRWL----P-----------------------------ESRAFAQA--A-G-------AGKQ---------------R 206 (406)
T ss_pred HHHHhC----C-----------------------------CChhHHhc--c-C-------cchh---------------h
Confidence 000001 0 00000000 0 0 0000 0
Q ss_pred ccccccCCCcccccccccchhhcccCchHHHHhhhHHHHHHHHHHHhhccccceeecchhHHHHHhcCCc-ccchhhHHH
Q 046386 353 RTKSFEKGGCCETIIGKDQLAMLGEEHSARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQSLGESS-RTTTLLTLY 431 (609)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~al~~~~-~~~~~VSl~ 431 (609)
+ +. .+ ...+..+....+.+++.+++....-..+.+...++.++.+.+. ......++.
T Consensus 207 -~---~~--------~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~ 264 (406)
T PRK11551 207 -A---PV--------LR----------ALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAF 264 (406)
T ss_pred -h---hh--------HH----------HHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHH
Confidence 0 00 00 0000001122333433333322222233344556666665532 345677888
Q ss_pred HHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhC
Q 046386 432 SSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFG 510 (609)
Q Consensus 432 Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG 510 (609)
.+.+.+||+..| ++|++.+ .|. +....+.+.++.+++...++...+++...+.|++.++..+..++++.|.+.
T Consensus 265 ~~~~~~~~~~~g~l~dr~g~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p 338 (406)
T PRK11551 265 NIGGALGSLLIGALMDRLRP----RRV--VLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYP 338 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhH----HHH--HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcc
Confidence 888999999998 5665432 222 222233333443333323444556677888899999999999999999999
Q ss_pred CCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHH
Q 046386 511 PNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLL 587 (609)
Q Consensus 511 ~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l 587 (609)
.++.|+..|+..+...+|+.+++.++|.++|... -+...|.+....++++.++++.+
T Consensus 339 ~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 339 TQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGR--------------------STVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred hhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCC--------------------chHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998643 36666766666666666655544
No 8
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.69 E-value=4.6e-15 Score=155.75 Aligned_cols=381 Identities=16% Similarity=0.128 Sum_probs=224.7
Q ss_pred ccccccccHHHHHHhCCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhH
Q 046386 55 NFDFSAYSSDLKSVLGVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYI 133 (609)
Q Consensus 55 ~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~ 133 (609)
.+.++...|.+++++|+|..|...+..+..+|. ....+.|.+.|..++..++.++.+...++........ .+|
T Consensus 10 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~------~~~ 83 (399)
T TIGR00893 10 RANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG------AYV 83 (399)
T ss_pred HHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc------CHH
Confidence 466788889999999999999999999988887 4466779999998776666666555555544432221 256
Q ss_pred HHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHhhhCCCChhHHHHHHHHHHHHHHHh
Q 046386 134 LVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGNAINPSSHALYLLLNALIPLITSLA 212 (609)
Q Consensus 134 ~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~~~f~~d~~~fLllla~~p~~v~~~ 212 (609)
.+....++.|.+.+....+......+.+| ++||.+.|+.-...++++.+...+...+....
T Consensus 84 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~------------------ 145 (399)
T TIGR00893 84 SLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHF------------------ 145 (399)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC------------------
Confidence 66666778888888888888888899998 67999999999999888888766643221100
Q ss_pred hhhccccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHHHHHHHHHHHHhhccccccccccccc
Q 046386 213 ALIPILRQPSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRLLFGGALFLLMFPLCIPGIVYARDWF 292 (609)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~~~~g~~~ll~~p~~~p~~~~~~~~~ 292 (609)
+.+..|.....+.++. .+......|.
T Consensus 146 --------------------~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~-------- 171 (399)
T TIGR00893 146 --------------------SWQWAFIIEGVLGIIW--------------------------GVLWLKFIPD-------- 171 (399)
T ss_pred --------------------CchHHHHHHHHHHHHH--------------------------HHHhhheecC--------
Confidence 0011111000000000 0000000000
Q ss_pred ccccccccccCCCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCcccccccccccccccccccCCCcccccccccch
Q 046386 293 KRTIHSSFRLDGSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMTYSLTRTKSFEKGGCCETIIGKDQL 372 (609)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (609)
.+ ++++ ..++ ++.+...+ . ..++ . + +. ++
T Consensus 172 ----~~----~~~~----~~~~-~~~~~~~~-~-------~~~~---------------~-~---~~--------~~--- 200 (399)
T TIGR00893 172 ----PP----QKAK----WLTE-EEKYIVVG-G-------LLAE---------------Q-Q---GK--------GP--- 200 (399)
T ss_pred ----CC----Cccc----cCCH-HHHhhcch-h-------hccc---------------c-c---cc--------cc---
Confidence 00 0000 0000 00000000 0 0000 0 0 00 00
Q ss_pred hhcccCchHHHHhhhHHHHHHHHHHHhhccccceeecchhHHHHH-hcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhh
Q 046386 373 AMLGEEHSARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQS-LGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMR 449 (609)
Q Consensus 373 ~~~~~~~~~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~a-l~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~ 449 (609)
+.....+.++.++++++|.+++..++......++.....+..+. .+.+. ......++..+.+.+|+++.| ++|++.
T Consensus 201 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 279 (399)
T TIGR00893 201 -STPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLL 279 (399)
T ss_pred -cCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00112245778999999998887777554444444455555544 44432 345577788888999999998 688776
Q ss_pred hhcccchhHHHHHHHHHH--HHHHHHHH-hcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhh
Q 046386 450 AKVYFARTGWLTIALLPT--PVAFCLLA-TSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIP 526 (609)
Q Consensus 450 ~~~~~~R~~~l~~~~~~~--~~~~ll~~-~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~ 526 (609)
+|.. +........... ..+...+. .........+...+++....+.+....++++|.+..++-|+.+|+..+...
T Consensus 280 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 357 (399)
T TIGR00893 280 RRGK--SLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGN 357 (399)
T ss_pred hccc--chhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHH
Confidence 5531 111111111111 11111111 111122233333333443333788999999999999999999999999889
Q ss_pred hHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHH
Q 046386 527 IGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLL 587 (609)
Q Consensus 527 ~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l 587 (609)
+|+.+++.+.|.++|..+ .|+..|.+.++.++++.++.+++
T Consensus 358 ~g~~~~~~i~g~l~~~~g--------------------~~~~~~~~~~~~~~~~~~~~~~~ 398 (399)
T TIGR00893 358 LGGIVGPIVIGAIAATTG--------------------SFAGALMVVAALALIGALSYLLL 398 (399)
T ss_pred HhhhhhhHHhhhhccCCC--------------------chhHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999754 58899998888887777665543
No 9
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.69 E-value=1.1e-14 Score=160.78 Aligned_cols=399 Identities=15% Similarity=0.019 Sum_probs=213.4
Q ss_pred CccccccccHHHHHHhCCChhhhhHHHHhhhcccch-hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchh
Q 046386 54 TNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKLF-GWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPY 132 (609)
Q Consensus 54 t~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~-G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~ 132 (609)
.-+.++.-.|++++++|+|.+|...+..+..+|..+ ..+.|.+.|...+..++.++.+...++-...-..... ....+
T Consensus 44 ~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~-~~~~~ 122 (467)
T PRK09556 44 IRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGS-GSVSL 122 (467)
T ss_pred HhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhc-ccchH
Confidence 455677888999999999999999999998888744 4667999999865555444433322222221111111 12235
Q ss_pred HHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHhhhCCCChhHHHHHHHHHHHHHHH
Q 046386 133 ILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGNAINPSSHALYLLLNALIPLITSL 211 (609)
Q Consensus 133 ~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~~~f~~d~~~fLllla~~p~~v~~ 211 (609)
+.++.+-++.|.+++....++.+...++|| ++||.+.|+.-...++++++-..+....
T Consensus 123 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~--------------------- 181 (467)
T PRK09556 123 GLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWG--------------------- 181 (467)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHH---------------------
Confidence 666666677888777666777788899998 5699999998888888777754432100
Q ss_pred hhhhccccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHHHHHHHHHHHHhhcccccccccccc
Q 046386 212 AALIPILRQPSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRLLFGGALFLLMFPLCIPGIVYARDW 291 (609)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~~~~g~~~ll~~p~~~p~~~~~~~~ 291 (609)
.. ..... .....|....++.++++ ++.++.. + +
T Consensus 182 ~~--------~~~~~------~~~~~f~~~g~~~~~~~----------------------i~~~~~~----~-----~-- 214 (467)
T PRK09556 182 AN--------YFFDG------HVIGMFIFPSIIALIIG----------------------FIGLRYG----S-----D-- 214 (467)
T ss_pred HH--------hhccC------cchhHHHHHHHHHHHHH----------------------HHHHHhC----C-----C--
Confidence 00 00000 00011211111111110 0000000 0 0
Q ss_pred cccccccccccCCCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCcccccccccccccccccccCCCcccccccccc
Q 046386 292 FKRTIHSSFRLDGSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMTYSLTRTKSFEKGGCCETIIGKDQ 371 (609)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (609)
.+ ++.+ ..++++. .. ++. . . ++ +++ ++++
T Consensus 215 -----~p----~~~~----~~~~~~~----~~----------~~~-~-------------~-~~-~~~--------~~~~ 243 (467)
T PRK09556 215 -----SP----EELG----WGKAEEI----FG----------EPI-S-------------E-ED-KET--------ESTD 243 (467)
T ss_pred -----Ch----hhcC----CCChhhc----cc----------Ccc-c-------------h-hh-hcc--------cccc
Confidence 00 0000 0000000 00 000 0 0 00 000 0000
Q ss_pred hhhcccCchHHHHhhhHHHHHHHHHHHhhccccceeecc-hhHHHHH-hcCCc-ccchhhHHHHHhhhhhhhhcc-chhh
Q 046386 372 LAMLGEEHSARLLVLRLDFWLYYIAYFCGGAIGLVYSNN-LGQIAQS-LGESS-RTTTLLTLYSSFSFFGRLLSA-APDY 447 (609)
Q Consensus 372 ~~~~~~~~~~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n-~g~I~~a-l~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~ 447 (609)
. ...+.-.++.++++.+|.+++..++..+. ...+.+ +....++ .+.+. .++...++..+.+.+|++..| ++|+
T Consensus 244 ~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr 320 (467)
T PRK09556 244 M--TKWQIFVEYVLKNPVIWLLCFANIFLYIV-RIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDL 320 (467)
T ss_pred C--cHHHHHHHHHHcChHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00010123478999999988887764322 222233 3333333 45543 344567778888999999999 6777
Q ss_pred hhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhh
Q 046386 448 MRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPI 527 (609)
Q Consensus 448 l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~ 527 (609)
+.+| |...............+++...++...+++...+.|++..+........+.|.+..++.|+-.|++.+.-.+
T Consensus 321 ~g~r----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l 396 (467)
T PRK09556 321 ANGR----RALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYL 396 (467)
T ss_pred HCCC----chHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHH
Confidence 6432 222221111111111112221222333445566677543333334456777999999999999999666554
Q ss_pred -HHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 046386 528 -GSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLLF 588 (609)
Q Consensus 528 -gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l~ 588 (609)
|+.+.+.+.|.++|.+.+...-. .-+ ..-|+..|.+.++++++++++.+.+.
T Consensus 397 ~g~~~~~~~~G~i~~~~~~g~~~~-------~~~--~~~~~~~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 397 FGDSFAKVGLGMIADPTKNGTPIF-------GYT--LTGWAGTFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred HhHHHHhhhHHHHhcccccccccc-------ccc--ccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 66888999999999432110000 000 11399999999999888888887775
No 10
>PRK03699 putative transporter; Provisional
Probab=99.68 E-value=4e-14 Score=152.67 Aligned_cols=376 Identities=14% Similarity=0.124 Sum_probs=228.3
Q ss_pred CchHHHHHHHHHHHHhc-CCccccccccHHHHHHhCCChhhhhHHHHhhhcccch-hhhhhhhhhhhhHHHHHHHHHHHH
Q 046386 36 SRKWMILVATIWIQAFT-GTNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKLF-GWLSGLALMYFPLWVVLFMAAFMG 113 (609)
Q Consensus 36 ~~Rw~~lvas~~v~l~~-Gt~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~-G~~sGll~~~~P~~~vllig~~~~ 113 (609)
.+||.....+.+...+. +..+.++..-|++++++|+|.+|...+..+..+|..+ .++.|.+.|...+..++.++.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~ 82 (394)
T PRK03699 3 SNRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALM 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 45665555555554444 5578899999999999999999999998888888755 456699999987776666666555
Q ss_pred HHHHHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHhhhCC
Q 046386 114 FFGYGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGNAINP 192 (609)
Q Consensus 114 ~~GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~~~f~ 192 (609)
.++..+... . ..+|.+....++.|.+.+.....+.....+.|| ++||.+.++.-..+++++.+...+...+..
T Consensus 83 ~i~~~l~~~--~----~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 156 (394)
T PRK03699 83 ILAVAGLMF--S----HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLA 156 (394)
T ss_pred HHHHHHHHH--c----chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555544322 1 124555555566676666566666666788999 468999998888888887766555322210
Q ss_pred CChhHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHHHHHHH
Q 046386 193 SSHALYLLLNALIPLITSLAALIPILRQPSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRLLFGGA 272 (609)
Q Consensus 193 ~d~~~fLllla~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~~~~g~ 272 (609)
+. .+....|.....+.++.
T Consensus 157 ~~-------------------------------------~gw~~~f~~~~~~~~~~------------------------ 175 (394)
T PRK03699 157 RS-------------------------------------IEWYWVYACIGLVYVAI------------------------ 175 (394)
T ss_pred cc-------------------------------------ccHHHHHHHHHHHHHHH------------------------
Confidence 00 00011111000000000
Q ss_pred HHHHHhhcccccccccccccccccccccccCCCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCccccccccccccc
Q 046386 273 LFLLMFPLCIPGIVYARDWFKRTIHSSFRLDGSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMTYSLT 352 (609)
Q Consensus 273 ~~ll~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (609)
.++... .. . ++.++++ + +++ .
T Consensus 176 -~~~~~~----~~-----------~---------------p~~~~~~-----~--------~~~---------------~ 196 (394)
T PRK03699 176 -FILTLF----SE-----------F---------------PALGKHA-----P--------KAD---------------K 196 (394)
T ss_pred -HHHHHh----cC-----------C---------------ccccccC-----c--------ccc---------------C
Confidence 000000 00 0 0000000 0 000 0
Q ss_pred ccccccCCCcccccccccchhhcccCchHHHHhhhHHHHHHHHHHHhhccccce-eecchhHHHHH-hcCCc-ccchhhH
Q 046386 353 RTKSFEKGGCCETIIGKDQLAMLGEEHSARLLVLRLDFWLYYIAYFCGGAIGLV-YSNNLGQIAQS-LGESS-RTTTLLT 429 (609)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Fwll~~~~~~g~g~Glm-~I~n~g~I~~a-l~~~~-~~~~~VS 429 (609)
+ . .+. ..++.+|++.+..++... +.+ +.+-.....++ .+.+. .....++
T Consensus 197 -~-------------~------~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~l~~~~g~s~~~~~~~~~ 248 (394)
T PRK03699 197 -P-------------V------AKE-------KWGIGVLFLAIAALLYIL-AQLTFISWVPEYAQKKFGMSLEDAGNLVS 248 (394)
T ss_pred -c-------------c------ccc-------cCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCChHHhhHHHH
Confidence 0 0 000 113467777776666432 222 33334555544 45533 3556788
Q ss_pred HHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHh
Q 046386 430 LYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSEL 508 (609)
Q Consensus 430 l~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~ 508 (609)
++.+.+.+||++.| ++|++ +..| .+....++..+..+++...++...+.+...+.|+++|+.+++..+...|.
T Consensus 249 ~~~~~~~ig~~~~g~l~dr~----~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ 322 (394)
T PRK03699 249 NFWMAYMVGMWIFSFIVRFF----DLQR--ILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQ 322 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHh----chhh--HHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999988 55544 3222 22222233333333333344444556677889999999999999888886
Q ss_pred hCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 046386 509 FGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLLF 588 (609)
Q Consensus 509 FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l~ 588 (609)
. .++.++..|.+.....+|+.+++.+.|.++|..+ ++.+|.+.+++++++.++.+.+.
T Consensus 323 ~-~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g---------------------~~~~~~~~~~~~~~~~~~~~~~~ 380 (394)
T PRK03699 323 T-KVASPKLVNFILTCGTIGTMLTFVVTSPIVAHFG---------------------LQAALLTANGLYAVVFVMCILLG 380 (394)
T ss_pred c-cCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhC---------------------chhhhhhhHHHHHHHHHHHHHHH
Confidence 5 4677888999988888999999999999999754 78899998888888887766665
Q ss_pred HHHhh
Q 046386 589 LRTRH 593 (609)
Q Consensus 589 ~r~r~ 593 (609)
+-.||
T Consensus 381 ~~~~~ 385 (394)
T PRK03699 381 FVSKH 385 (394)
T ss_pred HHHHH
Confidence 55554
No 11
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.67 E-value=2.1e-14 Score=157.96 Aligned_cols=414 Identities=13% Similarity=0.019 Sum_probs=224.4
Q ss_pred hHHHHHHHHHHHHhcCC-ccccccccHHHHHHhCCChhhhhHHHHhhhcccc-hhhhhhhhhhhhhHHHHHHHHHHHHHH
Q 046386 38 KWMILVATIWIQAFTGT-NFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKL-FGWLSGLALMYFPLWVVLFMAAFMGFF 115 (609)
Q Consensus 38 Rw~~lvas~~v~l~~Gt-~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~-~G~~sGll~~~~P~~~vllig~~~~~~ 115 (609)
+|..+.+..+...+... .+.++..-|.+++. |+|.+|.+.+....-++.. ...+.|.+.|.+.+..++.++.++..+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i 105 (452)
T PRK11273 27 RWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAA 105 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHH
Confidence 56655544443333322 23467788899988 9999999999888888874 466789999999776666676655555
Q ss_pred HHHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHhhhCCCC
Q 046386 116 GYGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGNAINPSS 194 (609)
Q Consensus 116 GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~~~f~~d 194 (609)
+.......... ...++.+....++.|.+++..+..+....++.|| ++||.+.|+.-...++++.+...+....
T Consensus 106 ~~~~~~~~~~~--~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~---- 179 (452)
T PRK11273 106 VMLFMGFVPWA--TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLG---- 179 (452)
T ss_pred HHHHHHhhhcc--cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHH----
Confidence 55443222111 1124455555566676666555555566778898 5699999997777777665544432100
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHHHHHHHHH
Q 046386 195 HALYLLLNALIPLITSLAALIPILRQPSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRLLFGGALF 274 (609)
Q Consensus 195 ~~~fLllla~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~~~~g~~~ 274 (609)
.. . . .+....|.....+.++. .++.
T Consensus 180 -----------------~~-~---------~------~gw~~~f~i~~~~~~~~----------------------~~l~ 204 (452)
T PRK11273 180 -----------------MA-W---------F------NDWHAALYMPAFAAILV----------------------ALFA 204 (452)
T ss_pred -----------------HH-H---------h------ccHHHHHHHHHHHHHHH----------------------HHHH
Confidence 00 0 0 00001111100000000 0001
Q ss_pred HHHhhcccccccccccccccccccccccCCCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCccccccccccccccc
Q 046386 275 LLMFPLCIPGIVYARDWFKRTIHSSFRLDGSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMTYSLTRT 354 (609)
Q Consensus 275 ll~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (609)
++.. +- .+ ++.. . +++ ++.+ . +.. . . .
T Consensus 205 ~~~~----~~------------~~----~~~~---~-~~~-~~~~---~----------~~~-~-------------~-~ 231 (452)
T PRK11273 205 FAMM----RD------------TP----QSCG---L-PPI-EEYK---N----------DYP-D-------------D-Y 231 (452)
T ss_pred HHHc----cC------------CH----hhcC---C-CCh-hhhh---h----------ccc-c-------------c-c
Confidence 1111 00 00 0000 0 000 0000 0 000 0 0 0
Q ss_pred ccccCCCcccccccccchhhcccCchHHHHhhhHHHHHHHHHHHhhccccceeecchhHHHHH-hcCCc-ccchhhHHHH
Q 046386 355 KSFEKGGCCETIIGKDQLAMLGEEHSARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQS-LGESS-RTTTLLTLYS 432 (609)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~a-l~~~~-~~~~~VSl~S 432 (609)
+ .+++ ++.. . .+.-.+..++++.+|.+++.+++....-..+.+-.....++ .+.+. .++...+++.
T Consensus 232 ~-~~~~-------~~~~---~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~ 299 (452)
T PRK11273 232 N-EKHE-------QELT---A-KQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYE 299 (452)
T ss_pred c-cccC-------CCcc---H-HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 0 0000 0000 0 01011236789999998887766432111222334444444 34432 2344566788
Q ss_pred Hhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHh--cCCcchhHHHHHHHHhhhcchhhhHHHHHHHhh
Q 046386 433 SFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLAT--SGNAVALQAGTSLIGLSSGFIFAAAVSITSELF 509 (609)
Q Consensus 433 i~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~--~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~F 509 (609)
+.+.+|+++.| ++|++.++. |.....+...+..++.+++.. .++....++...++|....+........+.|.+
T Consensus 300 ~~~~~g~~~~G~l~dr~~~~r---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 376 (452)
T PRK11273 300 YAGIPGTLLCGWMSDKVFRGN---RGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELA 376 (452)
T ss_pred HHHHHHHHHHHHHHHHHccCC---cchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHc
Confidence 88999999998 677764321 111111112222222222211 112223334445556554444444556788999
Q ss_pred CCCCchhhhhHHHhhhhhHHHH-HHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 046386 510 GPNSVGVNHNILITNIPIGSLV-YGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLLF 588 (609)
Q Consensus 510 G~k~fg~nyg~~~~a~~~gs~~-~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l~ 588 (609)
..+..|+..|+....-.+|+.+ ++.+.|.++|..+ |+..|.++++.++++++...++.
T Consensus 377 p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g---------------------~~~~f~~~~~~~~~~~~~~~~~~ 435 (452)
T PRK11273 377 PKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG---------------------WDGGFMVMIGGSILAVILLIVVM 435 (452)
T ss_pred ChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc---------------------chHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999996665666554 6889999999764 99999999999999999999888
Q ss_pred HHHhhhHHHHHhhh
Q 046386 589 LRTRHAYDCFERKR 602 (609)
Q Consensus 589 ~r~r~~y~~~~~~~ 602 (609)
..+||.-+++..||
T Consensus 436 ~~~~~~~~~~~~~~ 449 (452)
T PRK11273 436 IGEKRHHEELLQKR 449 (452)
T ss_pred ccccchHHHHHhhh
Confidence 77777777776665
No 12
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.66 E-value=3.1e-14 Score=155.89 Aligned_cols=130 Identities=18% Similarity=0.108 Sum_probs=94.0
Q ss_pred CCccccccccHHHHHHhCCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcch
Q 046386 53 GTNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLP 131 (609)
Q Consensus 53 Gt~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~ 131 (609)
...+.++.+-|++++++|+|..|...+..+..+|. ....+.|.+.|...+..++.++.++..++..+... .. .
T Consensus 37 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~--~~----~ 110 (434)
T PRK11663 37 FTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGF--SS----S 110 (434)
T ss_pred HhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHH--Hh----H
Confidence 34557788999999999999999999999888887 45567799999987666666666555555433321 11 2
Q ss_pred hHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHh
Q 046386 132 YILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGN 188 (609)
Q Consensus 132 ~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~ 188 (609)
+|.+++.-++.|.+.+....+......++|| ++||.+.|+.-...++++.+...+..
T Consensus 111 ~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~ 168 (434)
T PRK11663 111 LWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVG 168 (434)
T ss_pred HHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555455565555555566677789999 56999999999999888887666543
No 13
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.61 E-value=3.7e-13 Score=145.47 Aligned_cols=362 Identities=13% Similarity=0.036 Sum_probs=222.0
Q ss_pred HHHHHHhcCC-ccccccccHHHHHHhCCChhhhhHHHHhhhcccch-hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 046386 45 TIWIQAFTGT-NFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKLF-GWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWL 122 (609)
Q Consensus 45 s~~v~l~~Gt-~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~-G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l 122 (609)
...+.+.... .+.++...|++++++|.|..|...+.++..+|..+ ..+.|.+.|...++.++.+|.++..+|..+.-.
T Consensus 14 ~~~~~~~~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~ 93 (393)
T PRK09705 14 LVLIGLNMRPLLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMREL 93 (393)
T ss_pred HHHHHHHcchhhhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHH
Confidence 4455544443 35688999999999999999999999988888744 566699999998888888888887777765422
Q ss_pred HHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcCCCCcchhhhhhhhhhhhHHHHHHHHhhhCCCChhHHHHHH
Q 046386 123 VISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFPANRALALSLTVSFNGVSAAIYALAGNAINPSSHALYLLLN 202 (609)
Q Consensus 123 ~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP~~RG~avgl~k~~~GLSaaI~s~i~~~~f~~d~~~fLlll 202 (609)
. +.++.+.+.-++.|.|.+..+..+.....+.||++||.+.|+.-+...+++.+...+...+
T Consensus 94 --a----~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l------------ 155 (393)
T PRK09705 94 --Y----PQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWL------------ 155 (393)
T ss_pred --C----cchHHHHHHHHHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHH------------
Confidence 1 1245555666888888887776666667788999999999988776666665555443211
Q ss_pred HHHHHHHHHhhhhccccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHHHHHHHHHHHHhhccc
Q 046386 203 ALIPLITSLAALIPILRQPSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRLLFGGALFLLMFPLCI 282 (609)
Q Consensus 203 a~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~~~~g~~~ll~~p~~~ 282 (609)
. . +. .+....+..+. +..+++ .+...
T Consensus 156 ----------~-------~--~~------~~w~~~~~~~~-~~~~~~------------------------~~~~~---- 181 (393)
T PRK09705 156 ----------V-------Q--HS------ETWYQTLAWWA-LPAVVA------------------------LFAWW---- 181 (393)
T ss_pred ----------H-------H--hc------CCHHHHHHHHH-HHHHHH------------------------HHHHH----
Confidence 0 0 00 00001111000 000000 00000
Q ss_pred ccccccccccccccccccccCCCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCcccccccccccccccccccCCCc
Q 046386 283 PGIVYARDWFKRTIHSSFRLDGSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMTYSLTRTKSFEKGGC 362 (609)
Q Consensus 283 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (609)
+.. + ++++ + +++ + +
T Consensus 182 ~~~-----------~-------------~~~~----------~--------~~~-----------------~---~---- 195 (393)
T PRK09705 182 WQS-----------A-------------REVA----------S--------SHK-----------------T---T---- 195 (393)
T ss_pred HHh-----------c-------------CCCc----------c--------ccC-----------------C---C----
Confidence 000 0 0000 0 000 0 0
Q ss_pred ccccccccchhhcccCchHHHHhhhHHHHHHHHHHHhhccccc-eeecchhHHHHHhcCCcc-cchhhHHHHHhhhhhhh
Q 046386 363 CETIIGKDQLAMLGEEHSARLLVLRLDFWLYYIAYFCGGAIGL-VYSNNLGQIAQSLGESSR-TTTLLTLYSSFSFFGRL 440 (609)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~l~~~~Fwll~~~~~~g~g~Gl-m~I~n~g~I~~al~~~~~-~~~~VSl~Si~n~~GRl 440 (609)
. +.++.++++++|.+.+.+++.. .+. ...+-..+..++.+.+.. .....+++++.+.+||+
T Consensus 196 ------------~----~~~~~l~~~~~~~l~~~~~~~~-~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~ 258 (393)
T PRK09705 196 ------------T----TPVRVVFTPRAWTLGVYFGLIN-GGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGAL 258 (393)
T ss_pred ------------c----CCcccccCHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Confidence 0 0023456777887766665432 233 233445566666555333 45688999999999999
Q ss_pred hccchhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhC-CCCchhhhh
Q 046386 441 LSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFG-PNSVGVNHN 519 (609)
Q Consensus 441 ~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG-~k~fg~nyg 519 (609)
..| ++.||.+..|. +...+.+..++.+++...+. ....+...+.|++.|..+......+.+.++ .++-|+.+|
T Consensus 259 ~~g---~l~~r~~~~~~--~~~~~~l~~~~~~~~~~~~~-~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g 332 (393)
T PRK09705 259 LMP---AMARHQDRRKL--LMLALVLQLVGFCGFIWLPL-QLPVLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVA 332 (393)
T ss_pred HHH---HHHhhccchHH--HHHHHHHHHHHHHHHHHccc-hHHHHHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHH
Confidence 988 34444332222 22223333344433321222 112233456789999998888888888886 457799999
Q ss_pred HHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHH
Q 046386 520 ILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLL 587 (609)
Q Consensus 520 ~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l 587 (609)
++.....+++.+++.++|.+.|..+ -|...|.+.++.++++.++.+.+
T Consensus 333 ~~~~~~~~~~~~gp~~~G~l~~~~g--------------------~~~~~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK09705 333 FMQGIGFIIAGLAPWFSGVLRSISG--------------------NYLMDWAFHALCVVGLMIITLRF 380 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC--------------------CchHHHHHHHHHHHHHHHHHHHh
Confidence 9877777788889999999999764 48999999988888776666543
No 14
>PRK03545 putative arabinose transporter; Provisional
Probab=99.58 E-value=1.7e-12 Score=139.63 Aligned_cols=368 Identities=17% Similarity=0.089 Sum_probs=217.3
Q ss_pred chHHHHHHHHHHHHhc-CCccccccccHHHHHHhCCChhhhhHHHHhhhcccch-hhhhhhhhhhhhHHHHHHHHHHHHH
Q 046386 37 RKWMILVATIWIQAFT-GTNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKLF-GWLSGLALMYFPLWVVLFMAAFMGF 114 (609)
Q Consensus 37 ~Rw~~lvas~~v~l~~-Gt~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~-G~~sGll~~~~P~~~vllig~~~~~ 114 (609)
+||..+..-.+.+... -..|.-...-|++++++|.|++|++.+.....++..+ .++.|.+.|...+..+..++.+...
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 85 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFI 85 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 4565444433333332 3344455567999999999999999988888877644 5778999999987777777666655
Q ss_pred HHHHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHhhhCCC
Q 046386 115 FGYGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGNAINPS 193 (609)
Q Consensus 115 ~GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~~~f~~ 193 (609)
++..... .. ..+|.+.+.-++.|.+.+.+...+.....+.+| ++||.+.|+.-...+++.++...+...+.+
T Consensus 86 ~~~~~~~--~~----~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~- 158 (390)
T PRK03545 86 ASHVLSA--LA----WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ- 158 (390)
T ss_pred HHHHHHH--Hh----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH-
Confidence 5544332 11 125666555567777777666666666788888 689999999888888877765555321100
Q ss_pred ChhHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHHHHHHHH
Q 046386 194 SHALYLLLNALIPLITSLAALIPILRQPSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRLLFGGAL 273 (609)
Q Consensus 194 d~~~fLllla~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~~~~g~~ 273 (609)
. ...+..|. +..++++ +...
T Consensus 159 -----------------~--------------------~gw~~~f~----~~~~~~~-------------------l~~~ 178 (390)
T PRK03545 159 -----------------Y--------------------LGWRTTFL----AIGGGAL-------------------ITLL 178 (390)
T ss_pred -----------------H--------------------hcHHHHHH----HHHHHHH-------------------HHHH
Confidence 0 00001111 1000000 0000
Q ss_pred HHHHhhcccccccccccccccccccccccCCCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCcccccccccccccc
Q 046386 274 FLLMFPLCIPGIVYARDWFKRTIHSSFRLDGSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMTYSLTR 353 (609)
Q Consensus 274 ~ll~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (609)
... . ..| ++++ +++ .
T Consensus 179 ~~~-~--~~~---------------------------~~~~-------------------~~~---------------~- 193 (390)
T PRK03545 179 LLI-K--LLP---------------------------LLPS-------------------EHS---------------G- 193 (390)
T ss_pred HHH-H--hCC---------------------------CCCC-------------------CCc---------------c-
Confidence 000 0 000 0000 000 0
Q ss_pred cccccCCCcccccccccchhhcccCchHHHHhhhHHHHHHHHHHHhhccccceeecchhHHHHH-hcCCcc-cchhhHHH
Q 046386 354 TKSFEKGGCCETIIGKDQLAMLGEEHSARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQS-LGESSR-TTTLLTLY 431 (609)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~a-l~~~~~-~~~~VSl~ 431 (609)
+..+.++.++++.+|.+++..++......+..+...+..++ .+.+.. .....+++
T Consensus 194 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~ 250 (390)
T PRK03545 194 -----------------------SLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLF 250 (390)
T ss_pred -----------------------hHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHH
Confidence 00023567888999876655544322222222333444444 344332 44567788
Q ss_pred HHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHH-HhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhC
Q 046386 432 SSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLL-ATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFG 510 (609)
Q Consensus 432 Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~-~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG 510 (609)
++.+.+|++..| ++.||++ |...+ ....++..+..++ ...++...+++...+.|+++++......+.+.+...
T Consensus 251 ~~~~~~g~~~~g---~l~dr~~--~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 324 (390)
T PRK03545 251 GGAGIIGSVLFS---RLGNRHP--SGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP 324 (390)
T ss_pred HHHHHHHHHHHH---HHhhccc--hhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC
Confidence 888999999888 3334433 22222 2222233333222 223334556677888899998887778888888876
Q ss_pred CCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHH
Q 046386 511 PNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLL 587 (609)
Q Consensus 511 ~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l 587 (609)
++.|...|+......+|..+++.+.|.++|..+ ++.+|.+.+.+.++++++....
T Consensus 325 -~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g---------------------~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 325 -DATDVAMALFSGIFNIGIGAGALLGNQVSLHLG---------------------LSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred -CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---------------------hhHHHHHHHHHHHHHHHHHHHH
Confidence 677888887777677788888899999999875 8899998888887777665443
No 15
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.55 E-value=2e-12 Score=140.11 Aligned_cols=145 Identities=21% Similarity=0.187 Sum_probs=104.8
Q ss_pred chHHHHHHHHHHHHhcCC-ccccccccHHHHHHhCCChhhhhHHHHhhhcccch-hhhhhhhhhhhhHHHHHHHHHHHHH
Q 046386 37 RKWMILVATIWIQAFTGT-NFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKLF-GWLSGLALMYFPLWVVLFMAAFMGF 114 (609)
Q Consensus 37 ~Rw~~lvas~~v~l~~Gt-~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~-G~~sGll~~~~P~~~vllig~~~~~ 114 (609)
.||..+..+.......+. .+..+...|.+++++|+|..|...+..+..+|..+ +.+.|.+.|...+..++.++.+...
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~ 94 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYS 94 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 344444444455555554 33446667889999999999999999998888744 5667999999877777777777766
Q ss_pred HHHHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHH
Q 046386 115 FGYGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAG 187 (609)
Q Consensus 115 ~GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~ 187 (609)
++....-.. . .+|.+..+-++.|.+.+..+.+......+.|| ++||.+.|+.....+++..+...+.
T Consensus 95 ~~~~~~~~~--~----~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~ 162 (426)
T PRK12307 95 VGTGLSGLA--S----GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFM 162 (426)
T ss_pred HHHHHHHHH--h----HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHH
Confidence 666543222 1 24566666678888777777777777889999 5589999999988888887765553
No 16
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.55 E-value=1.4e-12 Score=141.01 Aligned_cols=127 Identities=13% Similarity=0.016 Sum_probs=92.8
Q ss_pred cccccHHHHHHhCCC--------hhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 046386 58 FSAYSSDLKSVLGVS--------QVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVI 128 (609)
Q Consensus 58 fs~YS~~lk~~L~~s--------q~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~ 128 (609)
++..-+.++.+++++ +.|.+.+..+..+|. ....+.|.+.|...+..++.++.++..++..+..... .
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~-~-- 123 (481)
T TIGR00879 47 IGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAA-F-- 123 (481)
T ss_pred hhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhc-c--
Confidence 444456777777777 899999999988887 4467779999999877777777666555554432211 1
Q ss_pred cchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHH
Q 046386 129 SLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAG 187 (609)
Q Consensus 129 ~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~ 187 (609)
...+|.+...-++.|.|.+..+........+.+| ++||.+.|+.-...++++.+...+.
T Consensus 124 ~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 124 ALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred ccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 1224566666678888888777777788889998 7799999999888888887777665
No 17
>TIGR00895 2A0115 benzoate transport.
Probab=99.53 E-value=1.2e-12 Score=138.65 Aligned_cols=145 Identities=19% Similarity=0.167 Sum_probs=107.1
Q ss_pred chHHHHHHHHHHHHhcCC-ccccccccHHHHHHhCCChhhhhHHHHhhhcccch-hhhhhhhhhhhhHHHHHHHHHHHHH
Q 046386 37 RKWMILVATIWIQAFTGT-NFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKLF-GWLSGLALMYFPLWVVLFMAAFMGF 114 (609)
Q Consensus 37 ~Rw~~lvas~~v~l~~Gt-~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~-G~~sGll~~~~P~~~vllig~~~~~ 114 (609)
.+|..+..+.+...+.|. .+.++.+.|.+++.+|+|..|.+.+.....+|..+ .++.|.+.|...+..++.++.++..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 93 (398)
T TIGR00895 14 YQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFS 93 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHH
Confidence 356666666666655554 56778899999999999999999998888888744 5677999999887777777766666
Q ss_pred HHHHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHH
Q 046386 115 FGYGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAG 187 (609)
Q Consensus 115 ~GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~ 187 (609)
+++.+.... ..++.+....++.|.+.+..+.+......+.+| ++||.+.|+......+++.+...+.
T Consensus 94 ~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 161 (398)
T TIGR00895 94 VFTLLCALA------TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLA 161 (398)
T ss_pred HHHHHHHHc------cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHH
Confidence 665544321 124555566677787777777777778889999 6799999998888888877766554
No 18
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.53 E-value=4.9e-12 Score=134.69 Aligned_cols=149 Identities=16% Similarity=0.109 Sum_probs=111.4
Q ss_pred cCCchHHHHHHHHHHHHhcCC-ccccccccHHHHHHhCCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHH
Q 046386 34 GQSRKWMILVATIWIQAFTGT-NFDFSAYSSDLKSVLGVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAF 111 (609)
Q Consensus 34 ~~~~Rw~~lvas~~v~l~~Gt-~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~ 111 (609)
.++++|..+.+..+...+.+. .+.++...|++++++|+|..|...+..+..+|. ..+.+.|.+.|...+..+++++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 345677777777666666654 556788889999999999999999988888887 445777999999977777677665
Q ss_pred HHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHh
Q 046386 112 MGFFGYGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGN 188 (609)
Q Consensus 112 ~~~~GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~ 188 (609)
+..++..+... . ..+|.++..-++.|.+.+..+.++.....+++| ++||.+.|+.-...+++..+...+..
T Consensus 86 ~~~~~~~~~~~--~----~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~ 157 (405)
T TIGR00891 86 LFSAGTLACGF--A----PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYS 157 (405)
T ss_pred HHHHHHHHHHH--h----ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555443321 1 235666666788888877777777777889998 67999999998888888777666543
No 19
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.52 E-value=5.6e-12 Score=135.54 Aligned_cols=140 Identities=21% Similarity=0.189 Sum_probs=102.7
Q ss_pred cchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHH
Q 046386 424 TTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVS 503 (609)
Q Consensus 424 ~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~ 503 (609)
.....+++.+...+||+..| ++.+|++..| .+.....++.++.+++...++...+.+...+.|+++|..+....+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g---~l~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~ 325 (399)
T PRK05122 251 AALALTLFGVAFVGARLLFG---NLINRLGGLR--VAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGV 325 (399)
T ss_pred chHHHHHHHHHHHHHHHHHH---HHHHHhccHH--HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 34556778888899999888 3444443222 333333344455444443444455666788899999999988888
Q ss_pred HHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHH
Q 046386 504 ITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAA 583 (609)
Q Consensus 504 i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~ 583 (609)
.+.|.+..++.|+.+|++.+...+|..+++.+.|.+.|..+ |+.+|.+.++++++++++
T Consensus 326 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g---------------------~~~~~~~~~~~~~~~~~~ 384 (399)
T PRK05122 326 EAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFG---------------------YPSIFLAAALAALLGLAL 384 (399)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---------------------HHHHHHHHHHHHHHHHHH
Confidence 88999999999999999988888888888888999998653 899999988888887776
Q ss_pred HHHHHH
Q 046386 584 SVLLFL 589 (609)
Q Consensus 584 sl~l~~ 589 (609)
...+..
T Consensus 385 ~~~~~~ 390 (399)
T PRK05122 385 TWLLYR 390 (399)
T ss_pred HHHhcc
Confidence 665433
No 20
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.51 E-value=3.2e-12 Score=139.29 Aligned_cols=144 Identities=15% Similarity=0.059 Sum_probs=102.8
Q ss_pred hHHHHHHHHHHHHhc-CCccccccccHHHHHHhCCChhhhhHHHHhhhcccch-hhhhhhhhhhhhHHHHHHHHHHHHHH
Q 046386 38 KWMILVATIWIQAFT-GTNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKLF-GWLSGLALMYFPLWVVLFMAAFMGFF 115 (609)
Q Consensus 38 Rw~~lvas~~v~l~~-Gt~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~-G~~sGll~~~~P~~~vllig~~~~~~ 115 (609)
||..++.....-.+. =-.+..+.-.|.+++++|+|.+|++.+..+..+|..+ .++.|.+.|.+++..++.++.++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 85 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGI 85 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHH
Confidence 344444333333332 2255567778999999999999999999999998744 57889999999877777776666666
Q ss_pred HHHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHH
Q 046386 116 GYGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAG 187 (609)
Q Consensus 116 GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~ 187 (609)
+..+... .. .++.++..-++.|.+.+....+......+.|| ++||.+.|+.....+++..+...+.
T Consensus 86 ~~~~~~~--~~----~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~ 152 (412)
T TIGR02332 86 ASTATMF--AT----GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILS 152 (412)
T ss_pred HHHHHHH--hc----CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655422 11 14555555677888777666776677789999 5799999999988888777755553
No 21
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.49 E-value=3.1e-12 Score=140.13 Aligned_cols=147 Identities=15% Similarity=0.095 Sum_probs=97.2
Q ss_pred hHHHHHHHHHHHHhcCC-ccccccccHHHHHHhCCChhhhhHHHHhhhcccc-hhhhhhhhhhhhhHHHHHHHHHHHHHH
Q 046386 38 KWMILVATIWIQAFTGT-NFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKL-FGWLSGLALMYFPLWVVLFMAAFMGFF 115 (609)
Q Consensus 38 Rw~~lvas~~v~l~~Gt-~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~-~G~~sGll~~~~P~~~vllig~~~~~~ 115 (609)
||..+.+......+... ...++...|.+++ +|+|++|...+..+..+|.. ..++.|.+.|.+++..++.++.++..+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHH
Confidence 56666655555444433 4456667788887 59999999999888888774 457779999998776666666555555
Q ss_pred HHHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHH
Q 046386 116 GYGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAG 187 (609)
Q Consensus 116 GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~ 187 (609)
+....... ......++.++...++.|.+.+..+........+.|| ++||++.|+.-...++++.+...+.
T Consensus 104 ~~~~~~~~--~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~ 174 (438)
T TIGR00712 104 VMLLMGFV--PWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLV 174 (438)
T ss_pred HHHHHhcc--ccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHH
Confidence 55443221 1111224455555556666555444555566778997 6799999998888888777766553
No 22
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.48 E-value=6.7e-11 Score=128.08 Aligned_cols=376 Identities=12% Similarity=0.094 Sum_probs=211.2
Q ss_pred hHHHHHHHHHHHHhcCCccccccccHHHHHHhCCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHHH
Q 046386 38 KWMILVATIWIQAFTGTNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFFG 116 (609)
Q Consensus 38 Rw~~lvas~~v~l~~Gt~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~G 116 (609)
.+....+....+...+..|. |-+++.+++|+|.+|...+..+..++. ....+.|.+.|...+..++.++.+...++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~ 91 (402)
T TIGR00897 15 LLWGYIGVVVFMTGDGLEQG---WLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVG 91 (402)
T ss_pred hhHHHHHHHHHHHhhhhHHH---hHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 34555555666666665554 335566779999999999998888886 44677899999998777777766665555
Q ss_pred HHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHhhhCCCCh
Q 046386 117 YGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGNAINPSSH 195 (609)
Q Consensus 117 Y~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~~~f~~d~ 195 (609)
..+. ... +.....+|.+...-++.|.|.+....+......+++| ++||.+.|+.-...+++..++..+.....-+.
T Consensus 92 ~~~~-~~~-~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~- 168 (402)
T TIGR00897 92 HAAF-IVF-GLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA- 168 (402)
T ss_pred HHHH-HHH-hccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-
Confidence 4322 111 1111124555445566677665544455555667776 88999999988888777544433321110000
Q ss_pred hHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHHHHHHHHHH
Q 046386 196 ALYLLLNALIPLITSLAALIPILRQPSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRLLFGGALFL 275 (609)
Q Consensus 196 ~~fLllla~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~~~~g~~~l 275 (609)
......+. ...... .++.+..
T Consensus 169 ------------------------------------~g~~~~~~----~~~~~~-------------------~~~~~~~ 189 (402)
T TIGR00897 169 ------------------------------------FGEMNTLW----SALAFV-------------------LTGGVIA 189 (402)
T ss_pred ------------------------------------cchHHHHH----HHHHHH-------------------HHHHHHH
Confidence 00000000 000000 0000000
Q ss_pred HHhhcccccccccccccccccccccccCCCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCcccccccccccccccc
Q 046386 276 LMFPLCIPGIVYARDWFKRTIHSSFRLDGSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMTYSLTRTK 355 (609)
Q Consensus 276 l~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (609)
... .+ +++++++. +++ ++
T Consensus 190 ~~~---~~---------------------------~~~~~~~~---------------~~~-----------------~~ 207 (402)
T TIGR00897 190 LFS---NK---------------------------DIFTPQHM---------------QTR-----------------EK 207 (402)
T ss_pred Hhc---cC---------------------------CCCCcccc---------------cCC-----------------cc
Confidence 000 00 00000000 000 00
Q ss_pred cccCCCcccccccccchhhcccCchHHHHhhhHHHHHHHHHHHhhccccc-eeecchhHHHHHhcCCcc-cchhhHHHHH
Q 046386 356 SFEKGGCCETIIGKDQLAMLGEEHSARLLVLRLDFWLYYIAYFCGGAIGL-VYSNNLGQIAQSLGESSR-TTTLLTLYSS 433 (609)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Fwll~~~~~~g~g~Gl-m~I~n~g~I~~al~~~~~-~~~~VSl~Si 433 (609)
. ++ . ....+..++++.+|.+.+..++... +. .+.+-.....++++.+.. .....++..+
T Consensus 208 --~---------~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~ 268 (402)
T TIGR00897 208 --F---------SE-----L--GKAATILFTNPNVLLGGMVRIINTI-GLFGFAVFLPMFVAELGFSTSEWLQIWGTFFF 268 (402)
T ss_pred --h---------hh-----H--HHHHHHHHcChhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCChhHHHHHHHHHHH
Confidence 0 00 0 0023457899999987776665432 22 222333344555665433 3345677788
Q ss_pred hhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHH---HHh--cCCcchhHHHHHHHHhhhcchhhhHHHHHHH
Q 046386 434 FSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCL---LAT--SGNAVALQAGTSLIGLSSGFIFAAAVSITSE 507 (609)
Q Consensus 434 ~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll---~~~--~~~~~~l~~~s~liG~~yG~~f~~~P~i~se 507 (609)
.+.+|++..| ++|++ +.+|.. ..+..+.+.+..+. ... .++...+++...+.|+++++... ..++++|
T Consensus 269 ~~~ig~~~~g~l~dr~----~~~~~~-~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~ 342 (402)
T TIGR00897 269 TNIVFNVIFGIVGDKL----GWMNTV-RWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPT 342 (402)
T ss_pred HHHHHHHHHHHHHHhh----cchhHH-HHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHh
Confidence 8999999988 45544 322221 11111112221111 111 12223355667888998887644 4566777
Q ss_pred hhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHH
Q 046386 508 LFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLL 587 (609)
Q Consensus 508 ~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l 587 (609)
. ..++.|+.+|+..++..+|..+++.++|.++|..+ +...|.+.+++.+++.++..++
T Consensus 343 ~-~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g---------------------~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 343 L-APKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFG---------------------AIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred h-CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---------------------hHHHHHHHHHHHHHHHHHHHHh
Confidence 6 45899999999999999999999999999999764 7788888888887777776654
No 23
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.48 E-value=1.7e-12 Score=136.23 Aligned_cols=357 Identities=15% Similarity=0.077 Sum_probs=202.6
Q ss_pred CccccccccHHHHHHhCCChhhhhHHHHhhhcccch-hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchh
Q 046386 54 TNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKLF-GWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPY 132 (609)
Q Consensus 54 t~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~-G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~ 132 (609)
....|+...|.+++++|+|..|...+..+..+|..+ .++.|.+.|...+..++.++.++..++..+..... .+
T Consensus 10 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~------~~ 83 (379)
T TIGR00881 10 VRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST------SL 83 (379)
T ss_pred hHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh------hH
Confidence 455678888999999999999999999998888744 57779999998776667777666666665543321 25
Q ss_pred HHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHhhhCCCChhHHHHHHHHHHHHHHH
Q 046386 133 ILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGNAINPSSHALYLLLNALIPLITSL 211 (609)
Q Consensus 133 ~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~~~f~~d~~~fLllla~~p~~v~~ 211 (609)
|.+++..++.|.+.+..+........+.+| ++||.+.|+.-....+++.+...+.....
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~-------------------- 143 (379)
T TIGR00881 84 WVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGI-------------------- 143 (379)
T ss_pred HHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHH--------------------
Confidence 666666677777777677777778889999 56999999988888888777663321110
Q ss_pred hhhhccccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHHHHHHHHHHHHhhcccccccccccc
Q 046386 212 AALIPILRQPSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRLLFGGALFLLMFPLCIPGIVYARDW 291 (609)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~~~~g~~~ll~~p~~~p~~~~~~~~ 291 (609)
. . . .+....|.....+.++.+ ++..+.. +.
T Consensus 144 -~-------~------~---~~~~~~~~~~~~~~~~~~----------------------~~~~~~~----~~------- 173 (379)
T TIGR00881 144 -A-------E------L---YSWHWVFIVPGIIAIIVS----------------------LICFLLL----RD------- 173 (379)
T ss_pred -H-------h------c---CCchhHHHHHHHHHHHHH----------------------HHHheee----CC-------
Confidence 0 0 0 000111111110000000 0000000 00
Q ss_pred cccccccccccCCCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCcccccccccccccccccccCCCcccccccccc
Q 046386 292 FKRTIHSSFRLDGSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMTYSLTRTKSFEKGGCCETIIGKDQ 371 (609)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (609)
..++ ++. .++++++.+ + .+++ . ++ .++ +
T Consensus 174 ---~~~~----~~~-----~~~~~~~~~-----~-------~~~~---------------~-~~-~~~----------~- 201 (379)
T TIGR00881 174 ---SPQS----CGL-----PPAEEMPNE-----E-------PDGD---------------A-EK-KEE----------E- 201 (379)
T ss_pred ---Cccc----ccc-----CccccCccc-----c-------cccc---------------c-cc-ccc----------c-
Confidence 0000 000 000000000 0 0000 0 00 000 0
Q ss_pred hhhcccCchHHHHhhhHHHHHHHHHHHhhccccceeecc-hhHHHH-HhcCCc-ccchhhHHHHHhhhhhhhhcc-chhh
Q 046386 372 LAMLGEEHSARLLVLRLDFWLYYIAYFCGGAIGLVYSNN-LGQIAQ-SLGESS-RTTTLLTLYSSFSFFGRLLSA-APDY 447 (609)
Q Consensus 372 ~~~~~~~~~~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n-~g~I~~-al~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~ 447 (609)
....+...++.++++.+|.+.+..++... +...+++ .....+ .++.+. ......++..+.+.+||++.| ++|+
T Consensus 202 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r 278 (379)
T TIGR00881 202 --LTKKQIFLQYVLLNKVLWYISLGYVFVYV-VRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDK 278 (379)
T ss_pred --ccchHHHHHHHHhcchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHH
Confidence 00012234678899999998877665432 2222222 233332 345433 344577788888999999988 5665
Q ss_pred hhhhcccchhHHHHHHHHHHHHHHHHHHh--cCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhh
Q 046386 448 MRAKVYFARTGWLTIALLPTPVAFCLLAT--SGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNI 525 (609)
Q Consensus 448 l~~~~~~~R~~~l~~~~~~~~~~~ll~~~--~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~ 525 (609)
..++ +|............++...+.. ..+...+.+...+.|++.++...+.++++.|.+..++-|+..|+..+..
T Consensus 279 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 355 (379)
T TIGR00881 279 LFNG---RRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFA 355 (379)
T ss_pred HcCC---cchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhh
Confidence 3221 1211111111112222222221 1122234455566777666677777889999999999999999999889
Q ss_pred hhHHHHHHHHHHHHhhccC
Q 046386 526 PIGSLVYGFLAAIVYDSNV 544 (609)
Q Consensus 526 ~~gs~~~~~i~g~iyD~~~ 544 (609)
.+|+.+++.+.|.+.|..+
T Consensus 356 ~~g~~~~~~~~g~l~~~~g 374 (379)
T TIGR00881 356 YLGGILAGLPLGYLADGFG 374 (379)
T ss_pred hhhhhhhhhhHHHHHHhhc
Confidence 9999999999999999754
No 24
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.46 E-value=1.8e-11 Score=126.64 Aligned_cols=331 Identities=24% Similarity=0.230 Sum_probs=218.4
Q ss_pred CccccccccHHHHHHhCCChhhhhHHHHhhhcccch-hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchh
Q 046386 54 TNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKLF-GWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPY 132 (609)
Q Consensus 54 t~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~-G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~ 132 (609)
..+.++.+.|.+.+++|.|+.|.+.+.....++..+ ..+.|.+.|+.++...+.++.....+++.+.... ..+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~------~~~ 87 (352)
T cd06174 14 DRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFA------SSL 87 (352)
T ss_pred hhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHh------ccH
Confidence 455677888999999999999999999999998744 5777999999977777788877777777665443 124
Q ss_pred HHHHHHHHHhhcchhhhhhHHHHHHHHhcCC-CCcchhhhhhhhhhhhHHHHHHHHhhhCCCChhHHHHHHHHHHHHHHH
Q 046386 133 ILVFFLCLLSGLSITWFNTVCFVLCIQNFPA-NRALALSLTVSFNGVSAAIYALAGNAINPSSHALYLLLNALIPLITSL 211 (609)
Q Consensus 133 ~~l~~~~~l~G~g~~~~~taalvT~~kNFP~-~RG~avgl~k~~~GLSaaI~s~i~~~~f~~d~~~fLllla~~p~~v~~ 211 (609)
|.+....++.|.+.+....+.-....+++|+ +|+.+.++.....++++.+...+...+.+.+.-...+.+...+.+++.
T Consensus 88 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (352)
T cd06174 88 WLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLA 167 (352)
T ss_pred HHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 6666666778887777777777888999995 899999999988888888776665433211100001100000000000
Q ss_pred hhhhccccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHHHHHHHHHHHHhhcccccccccccc
Q 046386 212 AALIPILRQPSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRLLFGGALFLLMFPLCIPGIVYARDW 291 (609)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~~~~g~~~ll~~p~~~p~~~~~~~~ 291 (609)
+....
T Consensus 168 ~~~~~--------------------------------------------------------------------------- 172 (352)
T cd06174 168 LLLLF--------------------------------------------------------------------------- 172 (352)
T ss_pred HHHHH---------------------------------------------------------------------------
Confidence 00000
Q ss_pred cccccccccccCCCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCcccccccccccccccccccCCCcccccccccc
Q 046386 292 FKRTIHSSFRLDGSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMTYSLTRTKSFEKGGCCETIIGKDQ 371 (609)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (609)
T Consensus 173 -------------------------------------------------------------------------------- 172 (352)
T cd06174 173 -------------------------------------------------------------------------------- 172 (352)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCchHHHHhhhHHHHHHHHHHHhhccccceeecchhHHHHHh-cCCc-ccchhhHHHHHhhhhhhhhcc-chhhh
Q 046386 372 LAMLGEEHSARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQSL-GESS-RTTTLLTLYSSFSFFGRLLSA-APDYM 448 (609)
Q Consensus 372 ~~~~~~~~~~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~al-~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l 448 (609)
++ +.+|.+.+..++....-..+.....+..++. +.+. ......++..+.+.+|++..+ ++|+.
T Consensus 173 -------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 238 (352)
T cd06174 173 -------------LL-RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL 238 (352)
T ss_pred -------------HH-HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 3344433333332221112222222333322 2211 233455566666777777777 45544
Q ss_pred hhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhH
Q 046386 449 RAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIG 528 (609)
Q Consensus 449 ~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~g 528 (609)
+.++. .+.+..++..++.++....++...+++...+.|+++|..+...++.+.|.+..|+.|+.+|+......+|
T Consensus 239 ----~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (352)
T cd06174 239 ----GRRRL-LLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLG 313 (352)
T ss_pred ----HhhhH-HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Confidence 32221 3333444445555554434445667888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHH
Q 046386 529 SLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASV 585 (609)
Q Consensus 529 s~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl 585 (609)
..+++.+.|.++|.. .|+..|.+.+++++++.++..
T Consensus 314 ~~i~~~i~g~l~~~~---------------------~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 314 GALGPLLAGLLLDTG---------------------GYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHhccc---------------------CcchHHHHHHHHHHHHHHHhe
Confidence 999999999999854 388999999888887776654
No 25
>PRK12382 putative transporter; Provisional
Probab=99.46 E-value=6.3e-11 Score=127.27 Aligned_cols=136 Identities=22% Similarity=0.188 Sum_probs=100.7
Q ss_pred hhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHH
Q 046386 426 TLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSIT 505 (609)
Q Consensus 426 ~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~ 505 (609)
...+..++.+.+|++..| ++.+|++.+|. +.+...++.++.+++...++...+++...+.|+++|..+...++.+
T Consensus 253 ~~~~~~~~~~~~~~~~~g---~l~~r~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~ 327 (392)
T PRK12382 253 FTLTAFGGAFVLMRVLFG---WMPDRFGGVKV--AIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEV 327 (392)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHhcCCCee--hHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 445666777888888887 33444443333 2233334445544444344445566778889999999999999999
Q ss_pred HHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHH
Q 046386 506 SELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASV 585 (609)
Q Consensus 506 se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl 585 (609)
.|.+..|+.|+..|+..+...+|..+++.+.|.+.|..+ |+..|.+.+++.++++++.+
T Consensus 328 ~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g---------------------~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 328 VKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFG---------------------YPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------------------chHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999764 89999998888877776655
Q ss_pred HH
Q 046386 586 LL 587 (609)
Q Consensus 586 ~l 587 (609)
..
T Consensus 387 ~~ 388 (392)
T PRK12382 387 LS 388 (392)
T ss_pred hh
Confidence 43
No 26
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.45 E-value=4.1e-11 Score=132.46 Aligned_cols=130 Identities=13% Similarity=0.072 Sum_probs=90.7
Q ss_pred CccccccccHHHHH-HhCCChhhhhHHHHhhhcccchh-hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcch
Q 046386 54 TNFDFSAYSSDLKS-VLGVSQVQLNYLATASDLGKLFG-WLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLP 131 (609)
Q Consensus 54 t~Y~fs~YS~~lk~-~L~~sq~qln~I~~a~~lG~~~G-~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~ 131 (609)
.-+.||.-.+.+++ .+|+|.+|+..+...-.++..++ ++.|.+.|.+.+..+..++.++..++....-.+.+.. ..+
T Consensus 49 ~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~-~~s 127 (462)
T PRK15034 49 VWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNP-NTP 127 (462)
T ss_pred HHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccc-CCC
Confidence 35667777788876 79999999998888777766555 8889999999776666666666555554332222221 235
Q ss_pred hHHHHHHHHHhhcchhhhhhHHHHHHHHhcCC-CCcchhhhhhhhhhhhHHHHHHH
Q 046386 132 YILVFFLCLLSGLSITWFNTVCFVLCIQNFPA-NRALALSLTVSFNGVSAAIYALA 186 (609)
Q Consensus 132 ~~~l~~~~~l~G~g~~~~~taalvT~~kNFP~-~RG~avgl~k~~~GLSaaI~s~i 186 (609)
++.++++-++.|.+ +..+.++++...++||+ +||++.|+.-+. |-.|....++
T Consensus 128 ~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~-G~~G~~l~~~ 181 (462)
T PRK15034 128 FGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGL-GNLGVSVMQL 181 (462)
T ss_pred HHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHH-HhhHHHHHHH
Confidence 77777777777876 44567788889999995 599999998744 4344444443
No 27
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.44 E-value=5.3e-12 Score=139.10 Aligned_cols=379 Identities=14% Similarity=0.102 Sum_probs=213.2
Q ss_pred HhCCChhhhhHHHHhhhcccc-hhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhcch
Q 046386 68 VLGVSQVQLNYLATASDLGKL-FGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYILVFFLCLLSGLSI 146 (609)
Q Consensus 68 ~L~~sq~qln~I~~a~~lG~~-~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~ 146 (609)
++|+|..+...+..+-.+|.. .+++.|.+.|.+.+..++.++.++..++..+....... .++.+.+.-++.|.+.
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~----~~~~l~~~r~~~G~~~ 145 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGG----GIALVVFCRVIQGLAQ 145 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHc----CchHHHHHHHHHHHhc
Confidence 689999998888888888874 35677999999876666666666555554443222221 2345555567788888
Q ss_pred hhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHhhhCCCChhHHHHHHHHHHHHHHHhhhhccccCCCCCC
Q 046386 147 TWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGNAINPSSHALYLLLNALIPLITSLAALIPILRQPSLDP 225 (609)
Q Consensus 147 ~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~~~f~~d~~~fLllla~~p~~v~~~~~~~~~~~~~~~~ 225 (609)
+....++.....++|| ++||.+.|+......++..+...+...+... .
T Consensus 146 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~--------------------------~----- 194 (465)
T TIGR00894 146 GSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCES--------------------------W----- 194 (465)
T ss_pred ccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------------------c-----
Confidence 8888888888999999 7899999999998888888866664322100 0
Q ss_pred CCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHHHHHHHHHHHHhhcccccccccccccccccccccccCCC
Q 046386 226 LPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRLLFGGALFLLMFPLCIPGIVYARDWFKRTIHSSFRLDGS 305 (609)
Q Consensus 226 ~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~~~~g~~~ll~~p~~~p~~~~~~~~~~~~~~~~~~~~~~ 305 (609)
. .-...|....++.++.+ +.....+ + .+++ ++
T Consensus 195 ~------gw~~~f~i~~~~~~~~~-----------------------~~~~~~~---~------------~~p~----~~ 226 (465)
T TIGR00894 195 G------GWPMIFYVFGIVGCAWS-----------------------LLWFVFP---A------------DDPS----IH 226 (465)
T ss_pred C------CCCeehhhhhHHHHHHH-----------------------HHHHHHh---c------------CCcc----cC
Confidence 0 01112211111111000 0000011 0 0000 00
Q ss_pred CccccCCCchhHHHHHhhHhhhhccCCCCCCCCCcccccccccccccccccccCCCcccccccccchhhcccCchHHHHh
Q 046386 306 GFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMTYSLTRTKSFEKGGCCETIIGKDQLAMLGEEHSARLLV 385 (609)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 385 (609)
...++ ++.+. .+++ .++ ++ + + .......++.+
T Consensus 227 ----~~~~~-~~~~~-i~~~-------~~~------------------~~--~---------~------~~~~~~~~~~~ 258 (465)
T TIGR00894 227 ----PCISK-FEKKY-INSS-------LQG------------------QK--G---------S------TRQSLPIKAIP 258 (465)
T ss_pred ----CCCCH-HHHHH-HHhh-------ccc------------------cc--C---------C------CCCCCCHHHHh
Confidence 00000 00000 0000 000 00 0 0 00112467899
Q ss_pred hhHHHHHHHHHHHhhccccceeecchhHHHHH-hcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHH-H
Q 046386 386 LRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQS-LGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWL-T 461 (609)
Q Consensus 386 ~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~a-l~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l-~ 461 (609)
+++.+|.+++..++.......+..-+....+. ++.+. ......++..+...+++++.| ++|++.+|....|.... .
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~ 338 (465)
T TIGR00894 259 KSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKI 338 (465)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHH
Confidence 99999998888766442222333444444433 45533 234556677888999999988 79987655333332211 1
Q ss_pred H-HHHHHHHHHHH--HHh-cCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHH
Q 046386 462 I-ALLPTPVAFCL--LAT-SGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAA 537 (609)
Q Consensus 462 ~-~~~~~~~~~ll--~~~-~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g 537 (609)
+ .......+..+ ... ..+.....+...+.+.++|+.....-....|..+ ++.|+..|+..+...+|+.+.+.+.|
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g 417 (465)
T TIGR00894 339 FNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAG 417 (465)
T ss_pred HHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 1 11111111111 111 1122222333445555666555555455556666 69999999999888899999999999
Q ss_pred HHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Q 046386 538 IVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLLFLRTRHAYD 596 (609)
Q Consensus 538 ~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l~~r~r~~y~ 596 (609)
.+.|.+.. + -|+..|.+.+++++++.++.......+++.+.
T Consensus 418 ~~~~~~~~---~---------------~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~w~ 458 (465)
T TIGR00894 418 NILSQDSK---N---------------VWLIVFLIMAFVNILCVIFYLIFGSAERQDWA 458 (465)
T ss_pred eeeCCCCc---h---------------HHHHHHHHHHHHHHHHHHHeeeeecceecCCC
Confidence 88876421 0 39999999999999888777765444444444
No 28
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.43 E-value=6.3e-11 Score=128.60 Aligned_cols=144 Identities=22% Similarity=0.242 Sum_probs=103.8
Q ss_pred CchHHHHHHHHHHHHhcCCccccccccHHHHHHhCCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHH
Q 046386 36 SRKWMILVATIWIQAFTGTNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGF 114 (609)
Q Consensus 36 ~~Rw~~lvas~~v~l~~Gt~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~ 114 (609)
.++++.+++.++..++.+.. ++..++.+++++|+|..++..+-....++. ..+.+.|.+.|...+..++.++.+...
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~ 87 (400)
T PRK11646 10 LGKYFLLIDNMLVVLGFFVV--FPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRA 87 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHH
Confidence 35688888888887776444 677788899999999999777777666654 445777999999887777777766665
Q ss_pred HHHHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHH
Q 046386 115 FGYGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAG 187 (609)
Q Consensus 115 ~GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~ 187 (609)
++...... .. .+|.++...++.|.+.+.++.+......+.+| ++||.+.|+......++..+...+.
T Consensus 88 ~~~~~~~~--~~----~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~ 155 (400)
T PRK11646 88 AGFATMAI--AH----EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLG 155 (400)
T ss_pred HHHHHHHH--hc----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65544322 11 25666666677777776666655555678887 6899999998888888877766554
No 29
>TIGR00898 2A0119 cation transport protein.
Probab=99.42 E-value=1.7e-11 Score=136.25 Aligned_cols=128 Identities=19% Similarity=0.263 Sum_probs=95.9
Q ss_pred CCccccccccHHHHHHhCCC---hhhhhHHHHhhhcccch-hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 046386 53 GTNFDFSAYSSDLKSVLGVS---QVQLNYLATASDLGKLF-GWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVI 128 (609)
Q Consensus 53 Gt~Y~fs~YS~~lk~~L~~s---q~qln~I~~a~~lG~~~-G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~ 128 (609)
|-.|.++.+.+++++++|++ ..|...+..+..+|..+ +++.|.+.|..++..+++++.++..++......
T Consensus 103 ~~~~~~~~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~------ 176 (505)
T TIGR00898 103 GWEYSYDTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAF------ 176 (505)
T ss_pred CcEecCCcccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH------
Confidence 45677778999999999999 99999999999999855 466799999998777777766665555544321
Q ss_pred cchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHH
Q 046386 129 SLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALA 186 (609)
Q Consensus 129 ~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i 186 (609)
...+|.+.++-++.|.+.+.....+.....+.+| ++||.+.++.-..++++..+...+
T Consensus 177 ~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 235 (505)
T TIGR00898 177 SPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLV 235 (505)
T ss_pred cccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 1235666667788888888777888888999998 568999888866666665554433
No 30
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.41 E-value=1.6e-10 Score=127.83 Aligned_cols=149 Identities=17% Similarity=0.180 Sum_probs=104.3
Q ss_pred cccccccHHHHHHhCCChhhhhHHHHhhhcccch-hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHH
Q 046386 56 FDFSAYSSDLKSVLGVSQVQLNYLATASDLGKLF-GWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYIL 134 (609)
Q Consensus 56 Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~-G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~ 134 (609)
+..+..-|++++++|+|..|.+.+.....+|..+ +++.|.+.|...+..+++++.++..++....... ..+|.
T Consensus 37 ~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~------~~~~~ 110 (496)
T PRK03893 37 VLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFA------PGYWT 110 (496)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH------hHHHH
Confidence 3555667999999999999999888888888744 6777999999977777777766666666543321 12566
Q ss_pred HHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHhhhCCCChhHHHHHHHHHHHHHH
Q 046386 135 VFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGNAINPSSHALYLLLNALIPLITS 210 (609)
Q Consensus 135 l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~~~f~~d~~~fLllla~~p~~v~ 210 (609)
+....++.|.+.+..+.++....++.|| ++||.+.|+......+++.+...+...+.+.-.-...+.++..+.++.
T Consensus 111 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~~ 187 (496)
T PRK03893 111 LFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIFA 187 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Confidence 6666677787777666776677889998 668999999999888888877777665543222223333344444443
No 31
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.40 E-value=5.4e-11 Score=138.50 Aligned_cols=145 Identities=16% Similarity=0.103 Sum_probs=105.3
Q ss_pred chHHHHHHHHHHHHhcCC-ccccccccHHHHHHhCCChhhhhHHHHhhhcccch-hhhhhhhhhhhhHHHHHHHHHHHHH
Q 046386 37 RKWMILVATIWIQAFTGT-NFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKLF-GWLSGLALMYFPLWVVLFMAAFMGF 114 (609)
Q Consensus 37 ~Rw~~lvas~~v~l~~Gt-~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~-G~~sGll~~~~P~~~vllig~~~~~ 114 (609)
.+|..++...+..+..|. ....+..-|.+++.+|++..+...+..+..+|..+ .++.|.+.|.+++..+++++.++..
T Consensus 164 ~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~ 243 (742)
T TIGR01299 164 FQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNG 243 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 457666666666655554 33466678999999999999999999999999844 4566999999877776667655554
Q ss_pred HHHHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHH
Q 046386 115 FGYGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAG 187 (609)
Q Consensus 115 ~GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~ 187 (609)
++-.+.. +.. .++.++++-++.|.|.+.....+.....+.+| ++||.+.++.-.+..+++++...+.
T Consensus 244 i~~ll~a--fa~----s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la 311 (742)
T TIGR01299 244 FFAFFSS--FVQ----GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMA 311 (742)
T ss_pred HHHHHHH--HHh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4443332 111 24566666677888777667777888899999 6799999999888888877766554
No 32
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.39 E-value=7.6e-11 Score=124.91 Aligned_cols=331 Identities=16% Similarity=0.069 Sum_probs=194.2
Q ss_pred cccccccHHHHHHhCCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHH
Q 046386 56 FDFSAYSSDLKSVLGVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYIL 134 (609)
Q Consensus 56 Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~ 134 (609)
..++..-|++++.+|+|.+|...+.....+|. ..+++.|.+.|..++..++.++.+...++.... .. .+.+.
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~---~~----~~~~~ 89 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR---SA----PGTAL 89 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH---Hh----ccHHH
Confidence 45677889999999999999999998888887 445677999999877666667665555554332 11 12355
Q ss_pred HHHHHHHhhcchhhhhhHHHHHHHHhcCCCCcchhhhhhhhhhhhHHHHHHHHhhhCCCChhHHHHHHHHHHHHHHHhhh
Q 046386 135 VFFLCLLSGLSITWFNTVCFVLCIQNFPANRALALSLTVSFNGVSAAIYALAGNAINPSSHALYLLLNALIPLITSLAAL 214 (609)
Q Consensus 135 l~~~~~l~G~g~~~~~taalvT~~kNFP~~RG~avgl~k~~~GLSaaI~s~i~~~~f~~d~~~fLllla~~p~~v~~~~~ 214 (609)
+.+..++.|.|.+...+++-....+.||++||.+.|+.-...+++..+...+...+-+.
T Consensus 90 l~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~--------------------- 148 (355)
T TIGR00896 90 LFAGTALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQH--------------------- 148 (355)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------------
Confidence 55555667777666555555556788999999999998888877777655553211000
Q ss_pred hccccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHHHHHHHHHHHHhhccccccccccccccc
Q 046386 215 IPILRQPSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRLLFGGALFLLMFPLCIPGIVYARDWFKR 294 (609)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~~~~g~~~ll~~p~~~p~~~~~~~~~~~ 294 (609)
.....+..+.+..++.+ +. .++.. |..
T Consensus 149 -------------------~~~~w~~~f~~~~~~~~-------------------~~--~~~~~----~~~--------- 175 (355)
T TIGR00896 149 -------------------SGGHWQQALAWWALPAL-------------------LA--LLAWI----PQV--------- 175 (355)
T ss_pred -------------------hhhhHHHHHHHHHHHHH-------------------HH--HHHHh----hhh---------
Confidence 00001100000000000 00 00001 100
Q ss_pred ccccccccCCCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCcccccccccccccccccccCCCcccccccccchhh
Q 046386 295 TIHSSFRLDGSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMTYSLTRTKSFEKGGCCETIIGKDQLAM 374 (609)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (609)
+ ++ + + ++. + .
T Consensus 176 --~---------------~~--~-------~--------~~~---------------~---------------~------ 185 (355)
T TIGR00896 176 --R---------------RR--V-------A--------ANQ---------------T---------------T------ 185 (355)
T ss_pred --c---------------cc--c-------C--------CCC---------------C---------------C------
Confidence 0 00 0 0 000 0 0
Q ss_pred cccCchHHHHhhhHHHHHHHHHHHhhccccceeecchhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhcc
Q 046386 375 LGEEHSARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVY 453 (609)
Q Consensus 375 ~~~~~~~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~ 453 (609)
...+.++.++++.+|.+.+.+++....-..+.+.+....++.+.+. ......+++.+...+||+..| ++.||++
T Consensus 186 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g---~l~dr~~ 260 (355)
T TIGR00896 186 --TRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIP---ALARRVK 260 (355)
T ss_pred --CCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHH---HHHhhhc
Confidence 0001245678889998766555432222233344555666665532 345688888888999999988 3334443
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCC-CCchhhhhHHHhhhhhHHHHH
Q 046386 454 FARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGP-NSVGVNHNILITNIPIGSLVY 532 (609)
Q Consensus 454 ~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~-k~fg~nyg~~~~a~~~gs~~~ 532 (609)
..|. .+....+++.++.+++...+.. ...+...+.|+++|..+++..+.+.+.+.. ++.|+.+|++.....++..++
T Consensus 261 ~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g 338 (355)
T TIGR00896 261 DQRG-IVAVLAVLQLVGLCGLLFAPMH-GLWAWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALG 338 (355)
T ss_pred cchH-HHHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2232 3333333444444433322222 223346788999999999988888877764 456888888766566777888
Q ss_pred HHHHHHHhhccC
Q 046386 533 GFLAAIVYDSNV 544 (609)
Q Consensus 533 ~~i~g~iyD~~~ 544 (609)
+.+.|.++|..+
T Consensus 339 p~~~G~l~~~~g 350 (355)
T TIGR00896 339 PLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHhc
Confidence 999999999875
No 33
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.39 E-value=1.6e-10 Score=126.29 Aligned_cols=366 Identities=14% Similarity=0.100 Sum_probs=210.2
Q ss_pred ccccHHHHHHhCCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHH
Q 046386 59 SAYSSDLKSVLGVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYILVFF 137 (609)
Q Consensus 59 s~YS~~lk~~L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l~~ 137 (609)
+..-|++|+++|+|..|...+..+..+|. ..+.++|.+.|+..+..++.+|.++..+|..+.+.... ..++|.++.
T Consensus 23 ~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~---~~~~~~~l~ 99 (410)
T TIGR00885 23 NPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAE---IMNYTLFLV 99 (410)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHh---hccHHHHHH
Confidence 35669999999999999999999999987 44677899999998877888887777777655422211 123666667
Q ss_pred HHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHhhhCCCCh---hHHHHHHHHHHHHHHHhh
Q 046386 138 LCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGNAINPSSH---ALYLLLNALIPLITSLAA 213 (609)
Q Consensus 138 ~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~~~f~~d~---~~fLllla~~p~~v~~~~ 213 (609)
..++.|.|.+..++++-....+..| ++|+...++.-+++++++.+-..+...++..+. ....+ -...|.
T Consensus 100 ~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~-~~~~~~------ 172 (410)
T TIGR00885 100 GLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVL-DKLSPE------ 172 (410)
T ss_pred HHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhh-hhcCHH------
Confidence 7788899988888776555566777 568889999999999988887777554432110 00000 000000
Q ss_pred hhccccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHHHHHHHHHHHHhhcccccccccccccc
Q 046386 214 LIPILRQPSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRLLFGGALFLLMFPLCIPGIVYARDWFK 293 (609)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~~~~g~~~ll~~p~~~p~~~~~~~~~~ 293 (609)
+.+ ...+.+....+.-+.+..++.+. .. +.....+ .|
T Consensus 173 -----------~~~-~~~~~~~~~w~~~fl~~a~~~~~------------------~~-~~~~~~~--~p---------- 209 (410)
T TIGR00885 173 -----------ELS-AIKHSDLASVQTPYMIIGAVVLA------------------VA-LLIMLTK--MP---------- 209 (410)
T ss_pred -----------HHH-HHHHHHHHHHHHHHHHHHHHHHH------------------HH-HHHHHhc--CC----------
Confidence 000 00001111122111110000000 00 0000000 00
Q ss_pred cccccccccCCCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCcccccccccccccccccccCCCcccccccccchh
Q 046386 294 RTIHSSFRLDGSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMTYSLTRTKSFEKGGCCETIIGKDQLA 373 (609)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (609)
+ .+++ + +++ + +
T Consensus 210 -------------------~-~~~~------~--------~~~-----------------~---------------~--- 220 (410)
T TIGR00885 210 -------------------A-LNHS------D--------AKQ-----------------I---------------S--- 220 (410)
T ss_pred -------------------C-CCcc------c--------ccc-----------------c---------------c---
Confidence 0 0000 0 000 0 0
Q ss_pred hcccCchHHHHhhhHHHHHHHHHHHhhccccceeecchhHHHHHhcCCc--c-cchhhHHHHHhhhhhhhhcc-chhhhh
Q 046386 374 MLGEEHSARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQSLGESS--R-TTTLLTLYSSFSFFGRLLSA-APDYMR 449 (609)
Q Consensus 374 ~~~~~~~~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~al~~~~--~-~~~~VSl~Si~n~~GRl~~g-~SD~l~ 449 (609)
. ..+.++.++++.+|+..+..++-.|.-.+..++..+-.+..+... . .+...+++-..-.+||++++ +.|++.
T Consensus 221 -~--~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~ 297 (410)
T TIGR00885 221 -F--SASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLA 297 (410)
T ss_pred -c--hhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 0 002245778888988777766654443344455555555443211 1 23456666667899999998 455542
Q ss_pred hhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHH
Q 046386 450 AKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGS 529 (609)
Q Consensus 450 ~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs 529 (609)
. |. .+.+..+...+..++....+ ......+..++|++.+.+|++.-++..+..|.+.-..--+++ ++. +|+
T Consensus 298 ----~-~~-~l~i~~~~~~~~~ll~~~~~-~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~-~~~-~Gg 368 (410)
T TIGR00885 298 ----A-HK-VLMAYAIIGMALCLGSIFAG-GHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLV-MAI-IGG 368 (410)
T ss_pred ----H-HH-HHHHHHHHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHH-HHH-hcc
Confidence 2 22 23333333334444443222 333466778889999999999999999999944433344444 333 999
Q ss_pred HHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHH
Q 046386 530 LVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLW 573 (609)
Q Consensus 530 ~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~ 573 (609)
.++|.+.|.+.|..+.+..+ -++.+|++.
T Consensus 369 a~~p~l~G~~~d~~~~~~~~---------------~~~~~~~~~ 397 (410)
T TIGR00885 369 GIVPPLQGFIIDMKEIAAAP---------------AVNTSFILP 397 (410)
T ss_pred chHHHHHHHHHHHhcccccC---------------ccchHHHHH
Confidence 99999999999965433221 278888874
No 34
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.37 E-value=3.7e-10 Score=121.32 Aligned_cols=125 Identities=18% Similarity=0.168 Sum_probs=89.0
Q ss_pred ccccccHHHHHHhCCChhhhhHHHHhhhcccchh-hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHH
Q 046386 57 DFSAYSSDLKSVLGVSQVQLNYLATASDLGKLFG-WLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYILV 135 (609)
Q Consensus 57 ~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~G-~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l 135 (609)
.+...-|.+++++|+|.+|.+.+..+..+|..+| .+.|.+.|...+..++.++.+...++..+. .... .+|.+
T Consensus 21 ~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~--~~~~----~~~~l 94 (382)
T PRK10091 21 GIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMF--TLSS----SYLML 94 (382)
T ss_pred HHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHH--HHhC----cHHHH
Confidence 4455678999999999999999999999988554 666999999987777777766665655433 1221 25666
Q ss_pred HHHHHHhhcchhhhhhHHHHHHHHhcCC-CCcchhhhhhhhhhhhHHHHHHHH
Q 046386 136 FFLCLLSGLSITWFNTVCFVLCIQNFPA-NRALALSLTVSFNGVSAAIYALAG 187 (609)
Q Consensus 136 ~~~~~l~G~g~~~~~taalvT~~kNFP~-~RG~avgl~k~~~GLSaaI~s~i~ 187 (609)
...-++.|.+.+...........+.+|+ +|+.+.|+.-....++..+...+.
T Consensus 95 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~ 147 (382)
T PRK10091 95 AIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLG 147 (382)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHH
Confidence 6666777877665544444556788885 578898887777777776655553
No 35
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.35 E-value=1.4e-11 Score=128.30 Aligned_cols=127 Identities=23% Similarity=0.262 Sum_probs=98.6
Q ss_pred cccccH-HHHHHhCCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHH
Q 046386 58 FSAYSS-DLKSVLGVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYILV 135 (609)
Q Consensus 58 fs~YS~-~lk~~L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l 135 (609)
+...-| .+++++|+|..|++.+..+..++. ..+.+.|.+.|...+..++.++.++..++..... +. ..+|.+
T Consensus 15 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~--~~----~~~~~~ 88 (352)
T PF07690_consen 15 ISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLA--FA----SNFWLL 88 (352)
T ss_dssp HHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH--HH----CCHHHH
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhh--hh----hhHHHH
Confidence 333445 789999999999999999988877 5677779999998766678887777777733332 22 125666
Q ss_pred HHHHHHhhcchhhhhhHHHHHHHHhcCC-CCcchhhhhhhhhhhhHHHHHHHHhhh
Q 046386 136 FFLCLLSGLSITWFNTVCFVLCIQNFPA-NRALALSLTVSFNGVSAAIYALAGNAI 190 (609)
Q Consensus 136 ~~~~~l~G~g~~~~~taalvT~~kNFP~-~RG~avgl~k~~~GLSaaI~s~i~~~~ 190 (609)
+...++.|.+.+..+.+......+.+|+ +|+.+.|+.-...+++..+...+...+
T Consensus 89 ~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l 144 (352)
T PF07690_consen 89 LIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFL 144 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhh
Confidence 6677888988888888888999999996 899999999999999998877775544
No 36
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.35 E-value=5e-10 Score=120.20 Aligned_cols=135 Identities=11% Similarity=0.059 Sum_probs=96.8
Q ss_pred hHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHH
Q 046386 428 LTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSE 507 (609)
Q Consensus 428 VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se 507 (609)
.++..+.+.++++..| ++.||++..|. +.+..+...++.+++...+++..+++...+.|+++|..+....+.+.+
T Consensus 264 ~~~~~l~~~~~~~~~g---~l~dr~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 338 (408)
T PRK09874 264 ASVPGVAALLSAPRLG---KLGDRIGPEKI--LITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVY 338 (408)
T ss_pred HHHHHHHHHHHHHHHH---HHHhccccchh--HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHH
Confidence 3445566777787777 34444433332 223333333444333323445556677788999999999999999999
Q ss_pred hhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHH
Q 046386 508 LFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLL 587 (609)
Q Consensus 508 ~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l 587 (609)
....++.|+.+|+......+|..+++.+.|.+.|..+ |+.+|.+.+++++++.++....
T Consensus 339 ~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g---------------------~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 339 NSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYG---------------------FRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred hCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcc---------------------hhHHHHHHHHHHHHHHHHHHHH
Confidence 9998999999999888888899999999999988653 8999999999888887776554
Q ss_pred H
Q 046386 588 F 588 (609)
Q Consensus 588 ~ 588 (609)
.
T Consensus 398 ~ 398 (408)
T PRK09874 398 L 398 (408)
T ss_pred H
Confidence 3
No 37
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.35 E-value=2.6e-10 Score=119.23 Aligned_cols=336 Identities=12% Similarity=0.005 Sum_probs=198.0
Q ss_pred HHHHHHhCCChhhhhHHHHhhhcccc-hhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHH
Q 046386 63 SDLKSVLGVSQVQLNYLATASDLGKL-FGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYILVFFLCLL 141 (609)
Q Consensus 63 ~~lk~~L~~sq~qln~I~~a~~lG~~-~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l~~~~~l 141 (609)
|.+..+++.|..|...+..+..++.. ...+.|.+.|...+..+++++.++..++.......... ....+|.++...++
T Consensus 23 ~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 101 (365)
T TIGR00900 23 PLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALL-GGLNIWQVYVLAGI 101 (365)
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHc-CCCcHHHHHHHHHH
Confidence 33556689999999999888888874 46777999999977777777666555555443332211 11245777777777
Q ss_pred hhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHhhhCCCChhHHHHHHHHHHHHHHHhhhhccccC
Q 046386 142 SGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGNAINPSSHALYLLLNALIPLITSLAALIPILRQ 220 (609)
Q Consensus 142 ~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~~~f~~d~~~fLllla~~p~~v~~~~~~~~~~~ 220 (609)
.|.+.+....+......+.+| ++|+.+.|+.-...+++..+...+...+.+ ..
T Consensus 102 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~------------------~~-------- 155 (365)
T TIGR00900 102 LAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYA------------------TL-------- 155 (365)
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH------------------Hh--------
Confidence 888888777777777888998 678999999999888888776655432210 00
Q ss_pred CCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHHHHHHHHHHHHhhccccccccccccccccccccc
Q 046386 221 PSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRLLFGGALFLLMFPLCIPGIVYARDWFKRTIHSSF 300 (609)
Q Consensus 221 ~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~~~~g~~~ll~~p~~~p~~~~~~~~~~~~~~~~~ 300 (609)
+.+..|. +..+..+ +..+.+... . .+
T Consensus 156 ------------g~~~~~~----~~~~~~~-------------------~~~~~~~~~----~-------------~~-- 181 (365)
T TIGR00900 156 ------------GIKWAIW----VDAVGFA-------------------ISALLIVSV----R-------------IP-- 181 (365)
T ss_pred ------------hHHHHHH----HHHHHHH-------------------HHHHHHHhc----c-------------cc--
Confidence 0000110 0000000 000000000 0 00
Q ss_pred ccCCCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCcccccccccccccccccccCCCcccccccccchhhcccCch
Q 046386 301 RLDGSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMTYSLTRTKSFEKGGCCETIIGKDQLAMLGEEHS 380 (609)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (609)
++ +++++ ++. + ++ . . ++....
T Consensus 182 ---~~-------~~~~~----------------~~~-----------------~---~~------~-~------~~~~~~ 202 (365)
T TIGR00900 182 ---EL-------AASEI----------------QAL-----------------S---NA------V-L------RDTREG 202 (365)
T ss_pred ---cC-------CCccc----------------ccc-----------------c---hh------H-H------HHHHhH
Confidence 00 00000 000 0 00 0 0 000113
Q ss_pred HHHHhhhHHHHHHHHHHHhhccccceeecchhHH-HHH-hcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhcccchh
Q 046386 381 ARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQI-AQS-LGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFART 457 (609)
Q Consensus 381 ~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I-~~a-l~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~ 457 (609)
.++.++++.+|.+.+..++..........+..+. .+. ++.+. ......++.++...+|++..+ ++.||++..+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~~~~- 278 (365)
T TIGR00900 203 IKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLG---LLGRYFKRMA- 278 (365)
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHH---HHHHHhchhH-
Confidence 4567888899887766555332222222233333 332 34422 234456667777778887776 4445543222
Q ss_pred HHHHHHHHHHHHHHHHHHhcC-CcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHH
Q 046386 458 GWLTIALLPTPVAFCLLATSG-NAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLA 536 (609)
Q Consensus 458 ~~l~~~~~~~~~~~ll~~~~~-~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~ 536 (609)
.+.......+++.+++...+ +...+++...+.|+++|.......+++.|.+..++-|+.+|+..+...+|..+++.+.
T Consensus 279 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~ 357 (365)
T TIGR00900 279 -LMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILA 357 (365)
T ss_pred -HHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333444444433233 2445667788999999999999999999999999999999999998889999999999
Q ss_pred HHHhhcc
Q 046386 537 AIVYDSN 543 (609)
Q Consensus 537 g~iyD~~ 543 (609)
|.++|..
T Consensus 358 g~l~~~~ 364 (365)
T TIGR00900 358 GPLADHL 364 (365)
T ss_pred HHHHHHc
Confidence 9999964
No 38
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.35 E-value=1.1e-09 Score=118.64 Aligned_cols=143 Identities=15% Similarity=0.113 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHhcCC-ccccccccHHHHHHhCCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHHH
Q 046386 39 WMILVATIWIQAFTGT-NFDFSAYSSDLKSVLGVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFFG 116 (609)
Q Consensus 39 w~~lvas~~v~l~~Gt-~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~G 116 (609)
|..+++.+....+.++ .|.-...-|++++.+|.|.+|.+.+..+..++. ..+.+.|.+.|...+..+..++.++..++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~ 98 (394)
T PRK10213 19 WSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLS 98 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHH
Confidence 4444444444333333 344444668899999999999888777777766 44567799999987777777766666565
Q ss_pred HHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHH
Q 046386 117 YGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAG 187 (609)
Q Consensus 117 Y~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~ 187 (609)
..+.- .. ..+|.+...-++.|.+.+.....+...+.+.|| ++||.+.|+.-+..+++..+...+.
T Consensus 99 ~~~~~--~~----~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~ 164 (394)
T PRK10213 99 CLLVS--FA----NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLG 164 (394)
T ss_pred HHHHH--HH----ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54321 11 235666666677787777666677777789998 6689999999998888877766664
No 39
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.35 E-value=1.2e-10 Score=126.69 Aligned_cols=179 Identities=13% Similarity=0.111 Sum_probs=110.2
Q ss_pred HHHHhhhHHHHHHHHHHHhhccccceeecchhHHHHHh-cCCc----ccchhhHHHHHhhhhhhhhccchhhhhhhcccc
Q 046386 381 ARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQSL-GESS----RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFA 455 (609)
Q Consensus 381 ~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~al-~~~~----~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~ 455 (609)
.++.++++.+|.+.+.+++....--++........... +... ..+...++..+.+.+|.+..| ++.||++.+
T Consensus 216 ~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g---~l~dr~g~~ 292 (420)
T PRK09528 216 ALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAP---FIINRIGAK 292 (420)
T ss_pred HHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHH---HHHHHhCcc
Confidence 35678888888765544332111111111222222222 1111 123445555666777777777 444444433
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhH-HHhhhhhHHHHHHH
Q 046386 456 RTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNI-LITNIPIGSLVYGF 534 (609)
Q Consensus 456 R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~-~~~a~~~gs~~~~~ 534 (609)
|. +.+..++..++.++....+++..+++...+.|++++......-..+.|.++.+..++.++. ..+...+|+.+++.
T Consensus 293 ~~--~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~ 370 (420)
T PRK09528 293 NA--LLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLST 370 (420)
T ss_pred hh--hHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHH
Confidence 33 3333334444444443345566677778888888888777777888999999999998876 34567788999999
Q ss_pred HHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHH
Q 046386 535 LAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASV 585 (609)
Q Consensus 535 i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl 585 (609)
+.|.++|..+ |+.+|.+.+++.+++.++.+
T Consensus 371 ~~G~l~~~~G---------------------~~~~f~~~~~~~~i~~~~~~ 400 (420)
T PRK09528 371 LAGNLYDSIG---------------------FQGTYLILGGIVLLFTLISV 400 (420)
T ss_pred HHHHHHHhhC---------------------chHHHHHHHHHHHHHHHHHH
Confidence 9999999764 89999988887666655444
No 40
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.33 E-value=1.1e-09 Score=117.98 Aligned_cols=350 Identities=18% Similarity=0.089 Sum_probs=200.2
Q ss_pred cccccccHHHHHHhCCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHH
Q 046386 56 FDFSAYSSDLKSVLGVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYIL 134 (609)
Q Consensus 56 Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~ 134 (609)
+.|+..-|++++++|.|.+|...+..+..+|. ...++.|.+.|+..+..++. ++...++. ........ ..++.
T Consensus 8 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~-~~~~~~~~---~~~~~~~~--~~~~~ 81 (368)
T TIGR00903 8 VTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLF-GSLATFAA---AAGRLLDP--FNYEW 81 (368)
T ss_pred HHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHH-HHHHHHHH---HHHHHHHh--ccHHH
Confidence 45788889999999999999999988888876 44577799999998766544 33332222 11111110 12455
Q ss_pred HHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHhhhCCCChhHHHHHHHHHHHHHHHhh
Q 046386 135 VFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGNAINPSSHALYLLLNALIPLITSLAA 213 (609)
Q Consensus 135 l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~~~f~~d~~~fLllla~~p~~v~~~~ 213 (609)
+...-++.|.|++. ...+....+++|| ++||.++|+.-....+++.+-..+...+ .
T Consensus 82 l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l----------------------~ 138 (368)
T TIGR00903 82 LLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKI----------------------Y 138 (368)
T ss_pred HHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------H
Confidence 55555777887774 3444455578888 7799999999999888888764443211 0
Q ss_pred hhccccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHHHHHHHHHHHHhhcccccccccccccc
Q 046386 214 LIPILRQPSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRLLFGGALFLLMFPLCIPGIVYARDWFK 293 (609)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~~~~g~~~ll~~p~~~p~~~~~~~~~~ 293 (609)
+ ..++ ...|.....+.++.+ ++..... |
T Consensus 139 -------~---~~gW------r~~f~~~~~l~~~~~----------------------~~~~~~l----p---------- 166 (368)
T TIGR00903 139 -------T---AGGL------QLLIIPIAAVAAAGI----------------------ILVLAAL----P---------- 166 (368)
T ss_pred -------H---ccch------HHHHHHHHHHHHHHH----------------------HHHHHHc----C----------
Confidence 0 0011 111211111110000 0000001 1
Q ss_pred cccccccccCCCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCcccccccccccccccccccCCCcccccccccchh
Q 046386 294 RTIHSSFRLDGSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMTYSLTRTKSFEKGGCCETIIGKDQLA 373 (609)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (609)
|+ +++ +. + . . + .++
T Consensus 167 ----------~~------p~~--~~---------------~-~---------------~-~-------------~~~--- 180 (368)
T TIGR00903 167 ----------AL------PFQ--AA---------------E-G---------------F-G-------------FKD--- 180 (368)
T ss_pred ----------CC------CCC--CC---------------C-C---------------c-c-------------hHH---
Confidence 00 000 00 0 0 0 0 000
Q ss_pred hcccCchHHHHhhhHHHHHHHHHHHhhccccceeecc-hhHHHHHhcCCcccchhhHHHHHhhhhhhhhcc-chhhhhhh
Q 046386 374 MLGEEHSARLLVLRLDFWLYYIAYFCGGAIGLVYSNN-LGQIAQSLGESSRTTTLLTLYSSFSFFGRLLSA-APDYMRAK 451 (609)
Q Consensus 374 ~~~~~~~~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n-~g~I~~al~~~~~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~ 451 (609)
. ....++.++++++|.+++..+|... +...+++ +.+..++.+++...... .++....|-+..+ ++|++.||
T Consensus 181 -~--~~~~~~ll~~~~~~~~~~~~~~~~~-~~~~~~~wlp~~L~~~g~s~~~~~~---~~l~~~~g~~g~~~~~d~~~r~ 253 (368)
T TIGR00903 181 -A--VKEFGALAGRKDLWIIGAILGFGVA-LFDNLAIWLEAALRPAGLEDIAGDA---VALAILAGLIGVAVIPDRVARA 253 (368)
T ss_pred -H--HHHHHHHHcChhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCCChHHHHH---HHHHHHHHHHHHHHhhHHhhhh
Confidence 0 0134678999999999988877543 3333333 55555554543222222 3333344445556 68887543
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHH
Q 046386 452 VYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLV 531 (609)
Q Consensus 452 ~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~ 531 (609)
+. |........+++++...++....++........+.|++.+..++++.++++|.|..++-|+-.|+....--+|+.+
T Consensus 254 -~~-r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~ 331 (368)
T TIGR00903 254 -GL-RSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVA 331 (368)
T ss_pred -hh-HHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHH
Confidence 21 2222222222333333333322223334445566778888888888899999999999999999998888888888
Q ss_pred HHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHH
Q 046386 532 YGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAAS 584 (609)
Q Consensus 532 ~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~s 584 (609)
++.+.+.+.. + .+..|.+.+..++++.++.
T Consensus 332 ~~~~~~~~~~--~---------------------~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 332 LALAAMLFIS--S---------------------AEAYFTFLAILITIAFAIA 361 (368)
T ss_pred HHHHHHHHhc--C---------------------HHHHHHHHHHHHHHHHHHH
Confidence 8877766652 1 5667877777777766664
No 41
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.32 E-value=2e-09 Score=114.10 Aligned_cols=143 Identities=13% Similarity=0.036 Sum_probs=100.4
Q ss_pred hHHHHHHHHHHHHhcCCccccccccHHHHHHhCCChhhhhHHHHhhhcccc-hhhhhhhhhhhhhHHHHHHHHHHHHHHH
Q 046386 38 KWMILVATIWIQAFTGTNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKL-FGWLSGLALMYFPLWVVLFMAAFMGFFG 116 (609)
Q Consensus 38 Rw~~lvas~~v~l~~Gt~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~-~G~~sGll~~~~P~~~vllig~~~~~~G 116 (609)
|++.+.+.. ..+..-....+...-|.+++++|+|.+|...+..+..+|.. ...+.|.+.|...+..++.++.++..++
T Consensus 5 ~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 83 (385)
T TIGR00710 5 AFALLLGCL-SILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALS 83 (385)
T ss_pred HHHHHHHHH-HHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHH
Confidence 444333333 33333233444555688999999999999988888888774 4567799999987777777776666666
Q ss_pred HHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHH
Q 046386 117 YGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAG 187 (609)
Q Consensus 117 Y~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~ 187 (609)
..+.... . .+|.++...++.|.+.+..+++......+.+| ++||.+.|+.-...++++.+...+.
T Consensus 84 ~~~~~~~--~----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 149 (385)
T TIGR00710 84 SLGLALS--N----NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLG 149 (385)
T ss_pred HHHHHHH--c----cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5544221 1 24666666677888888777777777889998 5689999999888888877766654
No 42
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.32 E-value=1.1e-09 Score=117.41 Aligned_cols=336 Identities=12% Similarity=0.076 Sum_probs=193.7
Q ss_pred cccccHHHHHHhCCChhhhhHHHHhhhcccch-hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHH
Q 046386 58 FSAYSSDLKSVLGVSQVQLNYLATASDLGKLF-GWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYILVF 136 (609)
Q Consensus 58 fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~-G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l~ 136 (609)
...+-|++++++|+|.+|...+..+..+|..+ ..+.|.+.|...+..++.++.+...+++.... ... .+|.+.
T Consensus 25 ~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~--~~~----~~~~l~ 98 (381)
T PRK03633 25 LNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLG--LMV----GFWSWL 98 (381)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hhc----cHHHHH
Confidence 34557889999999999999999999999744 56669999998776666777666666664432 222 245655
Q ss_pred HHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHhhhCCCChhHHHHHHHHHHHHHHHhhhh
Q 046386 137 FLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGNAINPSSHALYLLLNALIPLITSLAALI 215 (609)
Q Consensus 137 ~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~~~f~~d~~~fLllla~~p~~v~~~~~~ 215 (609)
+.-++.|.+.+...........+.+| ++||.+.|+-.....++.++...+...+....
T Consensus 99 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~--------------------- 157 (381)
T PRK03633 99 AWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTEL--------------------- 157 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc---------------------
Confidence 56677777766554443333445554 78999999888888887777665543221100
Q ss_pred ccccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHHHHHHHHHHHHhhcccccccccccccccc
Q 046386 216 PILRQPSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRLLFGGALFLLMFPLCIPGIVYARDWFKRT 295 (609)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~~~~g~~~ll~~p~~~p~~~~~~~~~~~~ 295 (609)
. ...+. ....++ .+++.++.. .
T Consensus 158 ------------~------~~~~~---~~~~~~---------------------~~~~~~~~~----~------------ 179 (381)
T PRK03633 158 ------------M------SVLPW---VTGLVL---------------------AAILPLLFT----R------------ 179 (381)
T ss_pred ------------c------chHHH---HHHHHH---------------------HHHHHHHHh----c------------
Confidence 0 00000 000000 000000000 0
Q ss_pred cccccccCCCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCcccccccccccccccccccCCCcccccccccchhhc
Q 046386 296 IHSSFRLDGSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMTYSLTRTKSFEKGGCCETIIGKDQLAML 375 (609)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (609)
. ++++ +++ + +
T Consensus 180 -~-------------~~~~-------------------~~~-----------------~---~----------------- 189 (381)
T PRK03633 180 -I-------------LNQQ-------------------AEN-----------------H---D----------------- 189 (381)
T ss_pred -c-------------cCCC-------------------CCC-----------------C---C-----------------
Confidence 0 0000 000 0 0
Q ss_pred ccCchHHHHhhhHHHHHHHHHHHh-hccccceeecchhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhcc
Q 046386 376 GEEHSARLLVLRLDFWLYYIAYFC-GGAIGLVYSNNLGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVY 453 (609)
Q Consensus 376 ~~~~~~~~~l~~~~Fwll~~~~~~-g~g~Glm~I~n~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~ 453 (609)
..+.++.++++.+|......++ +...+.. -+-+....+..+.+. .....+++..+.+.+||+..| ++.||++
T Consensus 190 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g---~l~dr~~ 263 (381)
T PRK03633 190 --STSIWPMLKLRQARLGVNGCIISGIVLGSL-YGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIG---RLADRFG 263 (381)
T ss_pred --CCCHHHHHHhcchHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhH---HHHHHcC
Confidence 0012346677777765433222 1111111 112333444445432 245678888889999999887 4444443
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHH
Q 046386 454 FARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYG 533 (609)
Q Consensus 454 ~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~ 533 (609)
.+ ..+.....++.++.+++. + ....+....+.|++.+..+....+.+.|....++.+.-.+...+...+|..+++
T Consensus 264 ~~--~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp 338 (381)
T PRK03633 264 RL--LVLRVQVFVVILGSIAML--S-QAAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGP 338 (381)
T ss_pred cH--HHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 233333333444333332 1 123444566778777777777777788888877777777777778889999999
Q ss_pred HHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHH
Q 046386 534 FLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVG 580 (609)
Q Consensus 534 ~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~ 580 (609)
.+.|.++|..+ ++..|.+.+.+.+++
T Consensus 339 ~~~G~l~~~~g---------------------~~~~f~~~~~~~l~~ 364 (381)
T PRK03633 339 SFTAMLMQNYS---------------------DNLLFIMIASVSFIY 364 (381)
T ss_pred HHHHHHHHHhC---------------------ccHHHHHHHHHHHHH
Confidence 99999999763 778888776655433
No 43
>PRK10504 putative transporter; Provisional
Probab=99.31 E-value=1.2e-09 Score=120.43 Aligned_cols=132 Identities=13% Similarity=0.080 Sum_probs=92.0
Q ss_pred CccccccccHHHHHHhCCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchh
Q 046386 54 TNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPY 132 (609)
Q Consensus 54 t~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~ 132 (609)
..+.++.+-|.+.+.+|+|+.|...+..+..++. ....+.|.+.|...+.-+.+++.+...+++... ... ...
T Consensus 25 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~--~~~----~~~ 98 (471)
T PRK10504 25 DTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFC--ALS----GTL 98 (471)
T ss_pred hHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHH--HHh----CCH
Confidence 3445666788999999999999888888878875 445667999999876666666555544555332 111 124
Q ss_pred HHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHhhhC
Q 046386 133 ILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGNAIN 191 (609)
Q Consensus 133 ~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~~~f 191 (609)
+.+....++.|.+.+...........+.+| ++||.+.|+.-....+++.+...+...+.
T Consensus 99 ~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~ 158 (471)
T PRK10504 99 NELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLV 158 (471)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 555556677787777666666666788899 56799999888777777777666654443
No 44
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.29 E-value=6e-10 Score=121.89 Aligned_cols=189 Identities=11% Similarity=0.110 Sum_probs=124.5
Q ss_pred HHHhhhHHHHHHHHHHHhhccccceeec-chhHHHHHhcCC---------cccchhhHHHHHhhhhhhhhccchhhhhhh
Q 046386 382 RLLVLRLDFWLYYIAYFCGGAIGLVYSN-NLGQIAQSLGES---------SRTTTLLTLYSSFSFFGRLLSAAPDYMRAK 451 (609)
Q Consensus 382 ~~~l~~~~Fwll~~~~~~g~g~Glm~I~-n~g~I~~al~~~---------~~~~~~VSl~Si~n~~GRl~~g~SD~l~~~ 451 (609)
++.+|++.||.+++..++... .....+ ......++.+.+ +......++..+...++++..| ++.||
T Consensus 202 ~~~~k~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g---~l~dr 277 (418)
T TIGR00889 202 FILFKNKRMAIFFFFSMLLGA-PLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIP---FFLKR 277 (418)
T ss_pred HHHhcCCCeeeHHHHHHHHHh-HHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHH---HHHHH
Confidence 467899999987777666322 121111 111122333322 1235567777777888888777 44444
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHhc-CCc---chhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHH-hhhh
Q 046386 452 VYFARTGWLTIALLPTPVAFCLLATS-GNA---VALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILI-TNIP 526 (609)
Q Consensus 452 ~~~~R~~~l~~~~~~~~~~~ll~~~~-~~~---~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~-~a~~ 526 (609)
++ |.+.+.+..+...+...++... ++. ..+++..++.|+++|......+.+++|.++.++.|+.+|+.. ....
T Consensus 278 ~g--~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~ 355 (418)
T TIGR00889 278 FG--IKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNG 355 (418)
T ss_pred hC--cHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHh
Confidence 43 2223444444455544444321 111 235667888999999988999999999999999999999996 6788
Q ss_pred hHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046386 527 IGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLLFLRT 591 (609)
Q Consensus 527 ~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l~~r~ 591 (609)
+|+.+++.+.|.++|..+..... -|+.+|.+.+..++++.++...++.+.
T Consensus 356 lg~~iGp~l~G~l~~~~g~~~~~---------------~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 356 FGSLLGYILSGVMVEKMFAYGTF---------------DWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred hHHHHHHHHHHHHHHHhccccCC---------------chHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999999999975422111 399999998888888777766665433
No 45
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.29 E-value=6e-10 Score=120.96 Aligned_cols=336 Identities=11% Similarity=-0.011 Sum_probs=184.9
Q ss_pred cccccHHHHHHhCCChhhhhHHHHhhhcccch-hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHH-HHhhcCcchhHHH
Q 046386 58 FSAYSSDLKSVLGVSQVQLNYLATASDLGKLF-GWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWL-VISHVISLPYILV 135 (609)
Q Consensus 58 fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~-G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l-~~~~~~~~~~~~l 135 (609)
...+-|.+.++++.|..|...+..+..+|..+ ..+.|.+.|...+..++.++.++..+++.+... .+.. ..++|.+
T Consensus 36 ~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~l 113 (417)
T PRK10489 36 LGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLP--EPSLLAI 113 (417)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcC--CCcHHHH
Confidence 34456788888999999999999988888744 567799999987665555555544455443321 1111 2235555
Q ss_pred HHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHhhhCCCChhHHHHHHHHHHHHHHHhhh
Q 046386 136 FFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGNAINPSSHALYLLLNALIPLITSLAAL 214 (609)
Q Consensus 136 ~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~~~f~~d~~~fLllla~~p~~v~~~~~ 214 (609)
....++.|.+.+....+......+.+| ++|+.+.|+.....+++..+...+...+... .
T Consensus 114 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~------------------~-- 173 (417)
T PRK10489 114 YLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAA------------------G-- 173 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH------------------H--
Confidence 555566676666666666666778888 5679998887777777666655543322100 0
Q ss_pred hccccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHHHHHHHHHHHHhhccccccccccccccc
Q 046386 215 IPILRQPSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRLLFGGALFLLMFPLCIPGIVYARDWFKR 294 (609)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~~~~g~~~ll~~p~~~p~~~~~~~~~~~ 294 (609)
.....| .+..++.+ +..+.+... |.
T Consensus 174 ------------------~~~~~~----~~~~~~~~-------------------~~~~~~~~l----~~---------- 198 (417)
T PRK10489 174 ------------------GVAWNY----GLAAAGTF-------------------ITLLPLLRL----PA---------- 198 (417)
T ss_pred ------------------hhHHHH----HHHHHHHH-------------------HHHHHHHhC----CC----------
Confidence 000001 00000000 000000101 10
Q ss_pred ccccccccCCCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCcccccccccccccccccccCCCcccccccccchhh
Q 046386 295 TIHSSFRLDGSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMTYSLTRTKSFEKGGCCETIIGKDQLAM 374 (609)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (609)
. +++ ++ + +++ + .++
T Consensus 199 ----------~------~~~---~~-----~--------~~~---------------~---------------~~~---- 212 (417)
T PRK10489 199 ----------L------PPP---PQ-----P--------REH---------------P---------------LRS---- 212 (417)
T ss_pred ----------C------CCC---Cc-----c--------ccc---------------c---------------hHH----
Confidence 0 000 00 0 000 0 000
Q ss_pred cccCchHHHHhhhHHHHHHHHHHHhhccccceeecchhHHHHH-hcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhc
Q 046386 375 LGEEHSARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQS-LGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKV 452 (609)
Q Consensus 375 ~~~~~~~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~a-l~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~ 452 (609)
. ....+..++++.+|.+++..++....+ .+........+. ++.+. ......++..+.+.+|++..+ ++.+|.
T Consensus 213 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~---~l~~~~ 286 (417)
T PRK10489 213 L--LAGFRFLLASPVVGGIALLGGLLTMAS-AVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSG---WLAHSA 286 (417)
T ss_pred H--HHHHHHHHcChHHHHHHHHHHHHHHHH-hHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHH---Hhhhcc
Confidence 0 002344667777776555443321111 111122333444 44432 233455666666777777666 444443
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHH
Q 046386 453 YFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVY 532 (609)
Q Consensus 453 ~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~ 532 (609)
+.+| .+....+.++++.+++...++...+.+...+.|++.|....+..+++.|.+..++.|+..|+..+...+|..++
T Consensus 287 ~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g 364 (417)
T PRK10489 287 RPGL--LMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIG 364 (417)
T ss_pred Ccch--HHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHH
Confidence 2222 33333344445544444233333455667777887777777778899999998899999999988888899999
Q ss_pred HHHHHHHhhccC
Q 046386 533 GFLAAIVYDSNV 544 (609)
Q Consensus 533 ~~i~g~iyD~~~ 544 (609)
+.+.|.+.|.-+
T Consensus 365 ~~l~G~l~~~~g 376 (417)
T PRK10489 365 AALLGGLGAMMT 376 (417)
T ss_pred HHHHHHHHHHhc
Confidence 999999999754
No 46
>PRK10054 putative transporter; Provisional
Probab=99.27 E-value=1.3e-09 Score=118.12 Aligned_cols=131 Identities=15% Similarity=0.084 Sum_probs=84.5
Q ss_pred hcCCccccccccHHHHHHhCCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 046386 51 FTGTNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVIS 129 (609)
Q Consensus 51 ~~Gt~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~ 129 (609)
..|....++..++.+++++|+|..|...+..+..++. ....+.|.+.|...+..+++++.....+++.+.. +.+.
T Consensus 20 ~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~--~~~~-- 95 (395)
T PRK10054 20 TIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIP--LVNN-- 95 (395)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHH--HHhH--
Confidence 4444555667788899999999999888877766655 4467779999998766666676666556654331 2221
Q ss_pred chhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHH
Q 046386 130 LPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAG 187 (609)
Q Consensus 130 ~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~ 187 (609)
+|.+..+.++.|.+.+.+..+.-.-..+.+| ++||.+.|+.-....+++++...+.
T Consensus 96 --~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~ 152 (395)
T PRK10054 96 --VTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLG 152 (395)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444333344444434344443344467776 5689999988887777766655543
No 47
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.26 E-value=4.9e-10 Score=118.35 Aligned_cols=129 Identities=19% Similarity=0.251 Sum_probs=92.1
Q ss_pred cCCccccccccHH-HHHHhCCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 046386 52 TGTNFDFSAYSSD-LKSVLGVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVIS 129 (609)
Q Consensus 52 ~Gt~Y~fs~YS~~-lk~~L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~ 129 (609)
....+.++.+.|+ +++++|+|..|.+.+..+..+|. ....+.|.+.|..++..+++++.++..++..+......
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~---- 89 (366)
T TIGR00886 14 FSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQ---- 89 (366)
T ss_pred HHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhh----
Confidence 3445778999996 99999999999999999999887 44577899999998777777777777677655433211
Q ss_pred chhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHH
Q 046386 130 LPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALA 186 (609)
Q Consensus 130 ~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i 186 (609)
.+|.+...-++.|.+.+. ...+.....++|| ++||.+.++..+...++..+...+
T Consensus 90 -~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i 145 (366)
T TIGR00886 90 -SYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFV 145 (366)
T ss_pred -hHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHH
Confidence 245555555566655443 3455677788998 679999998776655555444333
No 48
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.26 E-value=7.7e-09 Score=111.19 Aligned_cols=155 Identities=17% Similarity=0.179 Sum_probs=93.2
Q ss_pred HHHHhhhHHHHHHHHHHHhhccccceeecc-hhHHHHH-hcCCcccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchh
Q 046386 381 ARLLVLRLDFWLYYIAYFCGGAIGLVYSNN-LGQIAQS-LGESSRTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFART 457 (609)
Q Consensus 381 ~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n-~g~I~~a-l~~~~~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~ 457 (609)
.++.++++.+|.+.+..++. ..+.....+ .....+. ++.+ ....+++......|.++.+ +.|++.+|++ |.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~--~~ 273 (394)
T PRK11652 200 YRTLLSNRRFNCYLLMLIGT-LAGIAVFEACSGVLMGAVLGLS---SMTVSILFILPIPAAFFGAWFAGRPNKRFS--TL 273 (394)
T ss_pred HHHHHcChHHHHHHHHHHHH-HHHHHHHHHhChHHHHHHcCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH
Confidence 35567788888655544332 122222221 1223333 3442 2345566666777887776 5778877765 22
Q ss_pred HHHHHHHHHHH-HHHHHHHh--cCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHH
Q 046386 458 GWLTIALLPTP-VAFCLLAT--SGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGF 534 (609)
Q Consensus 458 ~~l~~~~~~~~-~~~ll~~~--~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~ 534 (609)
.+..+...... +..++... ..+...+.+..++.|++.|..+....+.+.|.+- ++.|+..++......+|+.+++.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~ 352 (394)
T PRK11652 274 MWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAAL 352 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHH
Confidence 22222221121 11111111 1223446667888999999989999998889985 88999999998888899999988
Q ss_pred HHHHHhhc
Q 046386 535 LAAIVYDS 542 (609)
Q Consensus 535 i~g~iyD~ 542 (609)
++|.+.+.
T Consensus 353 ~~~~~~~~ 360 (394)
T PRK11652 353 LSAMLPQT 360 (394)
T ss_pred HHHHccCC
Confidence 88877543
No 49
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.24 E-value=7.4e-09 Score=111.90 Aligned_cols=140 Identities=11% Similarity=0.105 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHH---hcCCccccccccHHHHHHhCCChhhhhHHHHhhhcccch-hhhhhhhhhhhhHHHHHHHHHHHHH
Q 046386 39 WMILVATIWIQA---FTGTNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKLF-GWLSGLALMYFPLWVVLFMAAFMGF 114 (609)
Q Consensus 39 w~~lvas~~v~l---~~Gt~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~-G~~sGll~~~~P~~~vllig~~~~~ 114 (609)
|+..+.....+. .+...+. .--|++++++|+|+.+.+.+-.+..+|..+ .++.|.+.|...+..+++++.....
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~ 89 (406)
T PRK15402 12 LLFPLCLVLFEFATYIANDMIQ--PGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFI 89 (406)
T ss_pred HHHHHHHHHHHHHHHhhhhhHh--cchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 344444444443 3344443 334779999999999999888888888744 4778999999977767777665555
Q ss_pred HHHHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcCCC-CcchhhhhhhhhhhhHHHHHHH
Q 046386 115 FGYGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFPAN-RALALSLTVSFNGVSAAIYALA 186 (609)
Q Consensus 115 ~GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP~~-RG~avgl~k~~~GLSaaI~s~i 186 (609)
++..+... .. .+|.+....++.|.+.+...........++||++ |+.+.++.....+++..+...+
T Consensus 90 ~~~~~~~~--~~----~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i 156 (406)
T PRK15402 90 LTCLAILL--AQ----SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLV 156 (406)
T ss_pred HHHHHHHH--Hc----cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55444322 11 2455555667777776666566666778899955 5667777666666655554444
No 50
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.22 E-value=5.9e-09 Score=110.32 Aligned_cols=176 Identities=16% Similarity=0.176 Sum_probs=106.9
Q ss_pred HhhhHHHHHHHHHHHhhccccceeecchhHHH-HHhcCCcc-cchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHH
Q 046386 384 LVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIA-QSLGESSR-TTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLT 461 (609)
Q Consensus 384 ~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~-~al~~~~~-~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~ 461 (609)
.++++++|.+++..++..+...++........ +.++.+.. .....++.++....+++..| ++.||++.+|.. .
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g---~l~~r~g~~~~~--~ 269 (375)
T TIGR00899 195 LLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAG---YLIKRFGKRRLM--L 269 (375)
T ss_pred hhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHH---HHHHHhcchhHH--H
Confidence 45666777766554443221112222233333 33454322 33344555556677777777 444444433332 2
Q ss_pred HHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhh
Q 046386 462 IALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYD 541 (609)
Q Consensus 462 ~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD 541 (609)
+..+...+..+++...++...+++...+.|+++|..++...+.+.|.+. ++.++..++.....-+|..+++.+.|.++|
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~ 348 (375)
T TIGR00899 270 LAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMP-GRAGAATTLYTNTGRVGWIIAGSVGGILAE 348 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222222222222334445666778899999999988899999987 566888888877777888899999999998
Q ss_pred ccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHH
Q 046386 542 SNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVL 586 (609)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~ 586 (609)
..+ |+..|.+.+..++++.++.+.
T Consensus 349 ~~g---------------------~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 349 RWS---------------------YHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred hcc---------------------chhHHHHHHHHHHHHHHHHhe
Confidence 653 888999888887777766543
No 51
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.21 E-value=5.4e-09 Score=116.80 Aligned_cols=117 Identities=9% Similarity=-0.026 Sum_probs=80.3
Q ss_pred CCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhcchhh
Q 046386 70 GVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYILVFFLCLLSGLSITW 148 (609)
Q Consensus 70 ~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~ 148 (609)
+.+..+...+.....+|. ...++.|.+.|+..+..++.++.+...++-.+............++.++..-++.|.+.+.
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~ 131 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGG 131 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhh
Confidence 456667777888888877 4456679999998877666666555555544332221111001245566666788888888
Q ss_pred hhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHH
Q 046386 149 FNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALA 186 (609)
Q Consensus 149 ~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i 186 (609)
.+..+..-..+.|| ++||.+.++.-....++..+-..+
T Consensus 132 ~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~ 170 (502)
T TIGR00887 132 DYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIV 170 (502)
T ss_pred hhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888899999999 779999999888777776554444
No 52
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.19 E-value=2.8e-09 Score=117.23 Aligned_cols=384 Identities=15% Similarity=0.079 Sum_probs=206.7
Q ss_pred ccccccHHHHHHhCCChhhhhHHHHhhhcccch-hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHH
Q 046386 57 DFSAYSSDLKSVLGVSQVQLNYLATASDLGKLF-GWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYILV 135 (609)
Q Consensus 57 ~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~-G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l 135 (609)
..+..-|++++++|.|..|...+..+..+|..+ ..+.|.+.|...+..++.++.++..++..+... ...++.+
T Consensus 20 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~------~~~~~~l 93 (485)
T TIGR00711 20 IVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGV------APNLELM 93 (485)
T ss_pred HHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhC------cCCHHHH
Confidence 455678999999999999999998888888754 455699999987777777776666565544321 1234566
Q ss_pred HHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHhhhCCCChhHHHHHHHHHHHHHHHhhh
Q 046386 136 FFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGNAINPSSHALYLLLNALIPLITSLAAL 214 (609)
Q Consensus 136 ~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~~~f~~d~~~fLllla~~p~~v~~~~~ 214 (609)
....++.|.+.+.....+.....+.+| ++||.+.|+.-....+++.+...+...+.+...-...+.......+++++..
T Consensus 94 ~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~ 173 (485)
T TIGR00711 94 IIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVA 173 (485)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHH
Confidence 666678888877777777778889998 7899999999888888888777766555432221222222222222222221
Q ss_pred hccccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHHHHHHHHHHHHhhccccccccccccccc
Q 046386 215 IPILRQPSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRLLFGGALFLLMFPLCIPGIVYARDWFKR 294 (609)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~~~~g~~~ll~~p~~~p~~~~~~~~~~~ 294 (609)
....+.+. + .+..+.|.... ......+.. +... ..
T Consensus 174 ~~~~~~~~--~--~~~~~~d~~g~---~l~~~~~~~------------------------~~~~-----~~--------- 208 (485)
T TIGR00711 174 FFILPRDK--P--AASENFDFLGL---LLLSVGLGS------------------------LLYG-----LS--------- 208 (485)
T ss_pred HHHcCCcc--c--cccCCCcHHHH---HHHHHHHHH------------------------HHHH-----Hh---------
Confidence 22222111 1 00011111100 000000000 0000 00
Q ss_pred ccccccccCCCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCcccccccccccccccccccCCCcccccccccchhh
Q 046386 295 TIHSSFRLDGSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMTYSLTRTKSFEKGGCCETIIGKDQLAM 374 (609)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (609)
+. ++. .+ . ++.+........-..- . ... .++. . .+
T Consensus 209 --~~----~~~-~~--~-~~~~~~~~~~~~~~~~-------~-~~~-----------~~~~--~---------~~----- 243 (485)
T TIGR00711 209 --EG----PER-GW--F-DSNEILILSITGLVAI-------I-AFV-----------VWEL--T---------DD----- 243 (485)
T ss_pred --hC----CCC-CC--C-CchHHHHHHHHHHHHH-------H-HHH-----------HHHH--c---------CC-----
Confidence 00 000 00 0 0000000000000000 0 000 0000 0 00
Q ss_pred cccCchHHHHhhhHHHHHHHHHHHhhccccceeecchhHHHHH-hcCCcc-cchhhHHHHHhhhhhhhhccchhhhhhhc
Q 046386 375 LGEEHSARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQS-LGESSR-TTTLLTLYSSFSFFGRLLSAAPDYMRAKV 452 (609)
Q Consensus 375 ~~~~~~~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~a-l~~~~~-~~~~VSl~Si~n~~GRl~~g~SD~l~~~~ 452 (609)
+.....+.+++++||...+..++....-....+...+..+. .+.+.. .....+...+...+|+++.| ++.+|+
T Consensus 244 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g---~l~~r~ 318 (485)
T TIGR00711 244 --NPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAG---RMGDKI 318 (485)
T ss_pred --CCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHH---HHHhhc
Confidence 00011357788888876555544221111112223334443 344332 33455566677777888777 444454
Q ss_pred ccchhHHHHHHHHHHHHHHHHHH-hc-C--CcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhH
Q 046386 453 YFARTGWLTIALLPTPVAFCLLA-TS-G--NAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIG 528 (609)
Q Consensus 453 ~~~R~~~l~~~~~~~~~~~ll~~-~~-~--~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~g 528 (609)
+. | +.+.+..++++++.+++. .. + ....+.+...+.|+++|..+......+.+.++.++.|+..|+..+...+|
T Consensus 319 ~~-~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g 396 (485)
T TIGR00711 319 DP-R-KLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLG 396 (485)
T ss_pred Cc-H-HHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHH
Confidence 32 2 234444444555554443 11 1 12335566788999999998888888888899999999999998888888
Q ss_pred HHHHHHHHHHHhhcc
Q 046386 529 SLVYGFLAAIVYDSN 543 (609)
Q Consensus 529 s~~~~~i~g~iyD~~ 543 (609)
+.+++.++|.++|++
T Consensus 397 ~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 397 GSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888888888753
No 53
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.19 E-value=1e-08 Score=112.89 Aligned_cols=128 Identities=14% Similarity=0.076 Sum_probs=87.8
Q ss_pred ccccccc---HHHHHHh--------CCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 046386 56 FDFSAYS---SDLKSVL--------GVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLV 123 (609)
Q Consensus 56 Y~fs~YS---~~lk~~L--------~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~ 123 (609)
|..++++ |.+++.+ |++..|.+.+.....+|. ...++.|.+.|++++..+++++.++..++.......
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~ 105 (479)
T PRK10077 26 YDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWP 105 (479)
T ss_pred cccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh
Confidence 4444444 5677777 899999999999999988 445677999999988877777766655555443321
Q ss_pred H---h--hcCcch-hHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHH
Q 046386 124 I---S--HVISLP-YILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIY 183 (609)
Q Consensus 124 ~---~--~~~~~~-~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~ 183 (609)
. . ...+.. ++.+..+=++.|.+.+..+..+.....+.+| ++||.+.|+.-...+++..+-
T Consensus 106 ~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~ 172 (479)
T PRK10077 106 EFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVV 172 (479)
T ss_pred ccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHH
Confidence 1 0 001111 2333344477888888888888888899998 669999998777666666553
No 54
>PRK11043 putative transporter; Provisional
Probab=99.19 E-value=1.6e-08 Score=109.05 Aligned_cols=143 Identities=12% Similarity=-0.011 Sum_probs=87.5
Q ss_pred hHHHHHHHHHHHHhcCCccccccccHHHHHHhCCChhhhhHHHHhhhcccc-hhhhhhhhhhhhhHHHHHHHHHHHHHHH
Q 046386 38 KWMILVATIWIQAFTGTNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKL-FGWLSGLALMYFPLWVVLFMAAFMGFFG 116 (609)
Q Consensus 38 Rw~~lvas~~v~l~~Gt~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~-~G~~sGll~~~~P~~~vllig~~~~~~G 116 (609)
.|+.+..++...+...+.+.+.-.-|++++++|.|.+|...+..+..+|.. .+.+.|.+.|...+..++.++..+..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 84 (401)
T PRK11043 5 KGFLVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALG 84 (401)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHH
Confidence 344444444444444444444444467899999999999999998888874 4577799999987777766666555555
Q ss_pred HHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcCCC-CcchhhhhhhhhhhhHHHHHHH
Q 046386 117 YGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFPAN-RALALSLTVSFNGVSAAIYALA 186 (609)
Q Consensus 117 Y~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP~~-RG~avgl~k~~~GLSaaI~s~i 186 (609)
..+... .. .+|.++...++.|.+.+...........+.||++ |+.+.+..-...++++++...+
T Consensus 85 ~~~~~~--~~----~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i 149 (401)
T PRK11043 85 SLGMLW--VE----SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLL 149 (401)
T ss_pred HHHHHH--hc----CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443321 11 2455555556666654433333334456788866 5666666555555555554433
No 55
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.18 E-value=1.6e-08 Score=108.71 Aligned_cols=173 Identities=10% Similarity=-0.012 Sum_probs=117.4
Q ss_pred HHHHhhhHHHHHHHHHHHhhccccceeecchhHHHHHhcCCcccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHH
Q 046386 381 ARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQSLGESSRTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGW 459 (609)
Q Consensus 381 ~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~al~~~~~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~ 459 (609)
.++.+|+++||.+.+..++..+.--.+.....+..++++.+.. .+++.-..+.++=+... ++|++.||++.+|.
T Consensus 198 ~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~---~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~-- 272 (382)
T TIGR00902 198 FIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISAS---ATGLLWGIGVLAEIIIFAFSNKLFQNCSARDL-- 272 (382)
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHh---HHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHH--
Confidence 4678999999998777666433322444555555666665322 23333333444444444 46688888764433
Q ss_pred HHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHH-hhhhhHHHHHHHHHHH
Q 046386 460 LTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILI-TNIPIGSLVYGFLAAI 538 (609)
Q Consensus 460 l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~-~a~~~gs~~~~~i~g~ 538 (609)
+.+..+...+...+....++...+++...+-|+++|..+......+.+. -.++.++-.++.. ++.++|..+++.+.|.
T Consensus 273 l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~ 351 (382)
T TIGR00902 273 LLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGF 351 (382)
T ss_pred HHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444555555554455566678889999999999999999999988 6677777777763 5778999999999999
Q ss_pred HhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHH
Q 046386 539 VYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGL 581 (609)
Q Consensus 539 iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~ 581 (609)
+||+-+ + ..|.++++++++++
T Consensus 352 l~~~~g---------------------~-~~~~~~~~~~~~~~ 372 (382)
T TIGR00902 352 IYPTLG---------------------A-GTFVFMAIIAAAAF 372 (382)
T ss_pred HHHhcc---------------------H-HHHHHHHHHHHHHH
Confidence 999763 3 56877777766554
No 56
>PRK09952 shikimate transporter; Provisional
Probab=99.17 E-value=2.8e-08 Score=109.28 Aligned_cols=133 Identities=12% Similarity=0.095 Sum_probs=86.1
Q ss_pred HHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHH--H-hcCCc-chhHHHHHHHHhhhcchhhhHHHH
Q 046386 430 LYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLL--A-TSGNA-VALQAGTSLIGLSSGFIFAAAVSI 504 (609)
Q Consensus 430 l~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~--~-~~~~~-~~l~~~s~liG~~yG~~f~~~P~i 504 (609)
+..+...+++++.| ++|++.+ +|. +....++..++.+.+ . ...+. ..+.+...+.|+++|..+++.+++
T Consensus 294 ~~g~~~~i~~~~~g~l~Dr~gr----r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 367 (438)
T PRK09952 294 LVGGLSCLTIPCFAWLADRFGR----RRV--YITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPM 367 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhCc----hHH--HHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566778888888 5665532 222 222222222222211 1 11112 222334566689999999999999
Q ss_pred HHHhhCCCCchhhhhHHH-hhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHH
Q 046386 505 TSELFGPNSVGVNHNILI-TNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAA 583 (609)
Q Consensus 505 ~se~FG~k~fg~nyg~~~-~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~ 583 (609)
+.|.|+.++-++-.|+.. .+..+|+.+.+.+.|.++|.... -|+..|...++.++++.+.
T Consensus 368 ~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~-------------------~~~~~~~~~~~~~~i~~v~ 428 (438)
T PRK09952 368 FTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGG-------------------SWHSVAIYLLAGCLISAMT 428 (438)
T ss_pred HHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCC-------------------CchHHHHHHHHHHHHHHHH
Confidence 999999988777777753 34557888889999999986531 3888888888888888777
Q ss_pred HHHH
Q 046386 584 SVLL 587 (609)
Q Consensus 584 sl~l 587 (609)
.+.+
T Consensus 429 ~~~~ 432 (438)
T PRK09952 429 ALLM 432 (438)
T ss_pred HHHc
Confidence 6654
No 57
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.15 E-value=9.8e-09 Score=108.35 Aligned_cols=158 Identities=18% Similarity=0.073 Sum_probs=94.1
Q ss_pred HHHhhhHH--HHHHHHHHHhhccccceeecchhHHHH-HhcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccch
Q 046386 382 RLLVLRLD--FWLYYIAYFCGGAIGLVYSNNLGQIAQ-SLGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFAR 456 (609)
Q Consensus 382 ~~~l~~~~--Fwll~~~~~~g~g~Glm~I~n~g~I~~-al~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R 456 (609)
++.++++. +|...+..++......+.........+ .++.+. ......++..+.+.+++++.| ++|+ ++.+|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~g~~~ 286 (394)
T TIGR00883 211 RETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDR----IGRRP 286 (394)
T ss_pred HHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH----hchHH
Confidence 44555544 666555544432211122233444443 344432 234566777788999998887 4554 43222
Q ss_pred hHHHHHHHHHHHHHHHHH--H-hcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHH-HhhhhhHHHHH
Q 046386 457 TGWLTIALLPTPVAFCLL--A-TSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNIL-ITNIPIGSLVY 532 (609)
Q Consensus 457 ~~~l~~~~~~~~~~~ll~--~-~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~-~~a~~~gs~~~ 532 (609)
. .+....+....+..++ . ..++...+.+...+.|+++|..++...+.+.|.+..++-++.+|+. ..+..+|+.++
T Consensus 287 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~ 365 (394)
T TIGR00883 287 V-LIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFA 365 (394)
T ss_pred H-HHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHH
Confidence 2 2212111111121111 1 1123344455677889999999999999999999998888888874 45566788889
Q ss_pred HHHHHHHhhccC
Q 046386 533 GFLAAIVYDSNV 544 (609)
Q Consensus 533 ~~i~g~iyD~~~ 544 (609)
+.+.|.++|..+
T Consensus 366 p~~~g~l~~~~g 377 (394)
T TIGR00883 366 PYIAAALVAMTG 377 (394)
T ss_pred HHHHHHHHHHcC
Confidence 999999999764
No 58
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.15 E-value=2.5e-08 Score=107.07 Aligned_cols=125 Identities=16% Similarity=0.025 Sum_probs=89.2
Q ss_pred CccccccccHHHHHHhCCChhhhhHHHHhhhcccch-hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchh
Q 046386 54 TNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKLF-GWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPY 132 (609)
Q Consensus 54 t~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~-G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~ 132 (609)
+.+.+..+-|++++++|+|..|.+.+.....+|..+ ..+.|.+.|...+..+++++.+...+++.+.... . .+
T Consensus 18 ~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~--~----~~ 91 (392)
T PRK10473 18 GIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLA--E----TS 91 (392)
T ss_pred HHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHh--C----cH
Confidence 344455789999999999999999888888888755 4678999999987777777776666666554221 1 23
Q ss_pred HHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHH
Q 046386 133 ILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYA 184 (609)
Q Consensus 133 ~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s 184 (609)
+.++...++.|.+.+..+..+.....+.+| ++|+.+.|+.-+...+++.+..
T Consensus 92 ~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~ 144 (392)
T PRK10473 92 SLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAP 144 (392)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455566777767666666677788887 7899999987666555554433
No 59
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.14 E-value=3.7e-08 Score=107.88 Aligned_cols=139 Identities=16% Similarity=0.065 Sum_probs=80.0
Q ss_pred cCCchHHHHHHHHHHHHhcCC-ccccccccHHHHHHhC---CChhhhhH---HHHhhhccc-chhhhhhhhhhhhhHHHH
Q 046386 34 GQSRKWMILVATIWIQAFTGT-NFDFSAYSSDLKSVLG---VSQVQLNY---LATASDLGK-LFGWLSGLALMYFPLWVV 105 (609)
Q Consensus 34 ~~~~Rw~~lvas~~v~l~~Gt-~Y~fs~YS~~lk~~L~---~sq~qln~---I~~a~~lG~-~~G~~sGll~~~~P~~~v 105 (609)
++.+||..++.+.+.....+- .+.++.-+|.+++.++ .+..|... +-.+.-+|. ..+++.|.+.|++.+..+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~ 95 (432)
T PRK10406 16 DTRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKS 95 (432)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHH
Confidence 344576555555333333221 3447777888999984 55554322 223333333 335567899999988777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc-Cc-chhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhh
Q 046386 106 LFMAAFMGFFGYGLQWLVISHV-IS-LPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLT 172 (609)
Q Consensus 106 llig~~~~~~GY~~~~l~~~~~-~~-~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~ 172 (609)
+.++.+...++-.....+-+.. +. ...+.+..+=++.|.|.+..+.++.....+++| ++||.+.++.
T Consensus 96 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~ 165 (432)
T PRK10406 96 MLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQ 165 (432)
T ss_pred HHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHH
Confidence 7665555444443332211110 00 112334445578888888777788788888998 7788876654
No 60
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.12 E-value=2.3e-08 Score=111.77 Aligned_cols=395 Identities=14% Similarity=0.074 Sum_probs=211.2
Q ss_pred hHHHHHHHHHHHHhcCC-ccccccccHHHHHHhCCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHH
Q 046386 38 KWMILVATIWIQAFTGT-NFDFSAYSSDLKSVLGVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFF 115 (609)
Q Consensus 38 Rw~~lvas~~v~l~~Gt-~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~ 115 (609)
+|..+++.......... ....+.--|++.+.+|.|++|.+.+..+-.++. ....+.|.+.|+..+.-+++++.....+
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~ 83 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGL 83 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 44444443333333222 334455579999999999999999999988887 4456679999999777777777666666
Q ss_pred HHHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhc-C-CCCcchhhhhhhhhhhhHHHHHHHHhhhCCC
Q 046386 116 GYGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNF-P-ANRALALSLTVSFNGVSAAIYALAGNAINPS 193 (609)
Q Consensus 116 GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNF-P-~~RG~avgl~k~~~GLSaaI~s~i~~~~f~~ 193 (609)
|..+... . ..+|.++..-++.|.|.+....+......+.| | ++||.+.|+.....+++..+...+...+.+.
T Consensus 84 ~~~~~~~--a----~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~ 157 (495)
T PRK14995 84 ASLAAAF--S----PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH 157 (495)
T ss_pred HHHHHHH--c----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 6654322 1 12466666667778877777666666667888 4 6799999999999999888877776655443
Q ss_pred ChhHHHHHHHHHHH-HHHHhhhhccccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHH----H
Q 046386 194 SHALYLLLNALIPL-ITSLAALIPILRQPSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRL----L 268 (609)
Q Consensus 194 d~~~fLllla~~p~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~----~ 268 (609)
-.=...+.. ..|. +++++....+++.++ .+.+++.+..... .....+.+..|.+.. ..+....+.. .
T Consensus 158 ~gwr~~f~i-~~~~~~~~~~l~~~~l~~~~---~~~~~~~d~~g~~--~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~ 229 (495)
T PRK14995 158 FYWGSVFLI-NVPIVLVVMGLTARYVPRQA---GRRDQPLNLGHAL--MLIVAILLLVYSAKT--ALKGFLSLWVTSLTL 229 (495)
T ss_pred CChHHHHHH-HHHHHHHHHHHHHHhCCCCC---CCCCCCCChHhHH--HHHHHHHHHHHHHHh--ccccCCchHHHHHHH
Confidence 211222222 2222 222222122222211 1111111111111 011111111111000 0000000000 0
Q ss_pred HHHHHHHHHhhcccccccccccccccccccccccCCCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCccccccccc
Q 046386 269 FGGALFLLMFPLCIPGIVYARDWFKRTIHSSFRLDGSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMT 348 (609)
Q Consensus 269 ~~g~~~ll~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (609)
..+...+... ...|. ...+
T Consensus 230 ~~~~~~l~~f-------------------------------------------~~~e~-------~~~~----------- 248 (495)
T PRK14995 230 LTGALLLGLF-------------------------------------------IRTQL-------AASR----------- 248 (495)
T ss_pred HHHHHHHHHH-------------------------------------------HHHHh-------cCCC-----------
Confidence 0000000000 00000 0000
Q ss_pred ccccccccccCCCcccccccccchhhcccCchHHHHhhhHHHHHHHHHHHhhccccce-eecchhHHHHH-hcCCc-ccc
Q 046386 349 YSLTRTKSFEKGGCCETIIGKDQLAMLGEEHSARLLVLRLDFWLYYIAYFCGGAIGLV-YSNNLGQIAQS-LGESS-RTT 425 (609)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Fwll~~~~~~g~g~Glm-~I~n~g~I~~a-l~~~~-~~~ 425 (609)
+-.. .++++++.|+...+..++... +.. +.....+-.|. .+.+. .+.
T Consensus 249 ----------------------------p~~~-~~lf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~lq~v~g~s~~~ag 298 (495)
T PRK14995 249 ----------------------------PMID-MRLFTHRIILSGVVMAMTAMI-TLVGFELLMAQELQFVHGLSPLEAG 298 (495)
T ss_pred ----------------------------CCcC-HHHhCCcccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 0001 356788888775555544221 111 11122222233 34432 244
Q ss_pred hhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHHHhc---CCcchhHHHHHHHHhhhcchhhhHH
Q 046386 426 TLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLLATS---GNAVALQAGTSLIGLSSGFIFAAAV 502 (609)
Q Consensus 426 ~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~---~~~~~l~~~s~liG~~yG~~f~~~P 502 (609)
.+....++...++.++.| ++.+|++. |. .+....++..++.+++... ++....++..++.|+++|..+....
T Consensus 299 ~~~~~~~~~~~~~~~~~g---~l~~r~g~-~~-~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~ 373 (495)
T PRK14995 299 MFMLPVMVASGFSGPIAG---ILVSRLGL-RL-VATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLAST 373 (495)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHcCc-hH-HHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHH
Confidence 566667777888888888 44455543 33 3333333444444433211 2223456678888999999888888
Q ss_pred HHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhc
Q 046386 503 SITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDS 542 (609)
Q Consensus 503 ~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~ 542 (609)
..+.+....++.|.-.++..+...+|+.++.-+.|.++|.
T Consensus 374 ~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 374 SAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888899988888787888888887777777764
No 61
>PRK15075 citrate-proton symporter; Provisional
Probab=99.12 E-value=7.7e-08 Score=105.39 Aligned_cols=126 Identities=15% Similarity=0.017 Sum_probs=78.9
Q ss_pred ccccccccHHHHHHhCCChhhhhHH-HHhhhccc-----c-hhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 046386 55 NFDFSAYSSDLKSVLGVSQVQLNYL-ATASDLGK-----L-FGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHV 127 (609)
Q Consensus 55 ~Y~fs~YS~~lk~~L~~sq~qln~I-~~a~~lG~-----~-~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~ 127 (609)
...++.+.|+++++++.++.|...+ ......+. . ..++.|.+.|...+..+++++.....++..+.- +...
T Consensus 31 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~--~~~~ 108 (434)
T PRK15075 31 FFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIA--FVPG 108 (434)
T ss_pred HHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHH--hCCc
Confidence 3457899999999999998886433 22222222 1 246779999999877777776655444443321 1111
Q ss_pred Cc-ch---hHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHH
Q 046386 128 IS-LP---YILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAI 182 (609)
Q Consensus 128 ~~-~~---~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI 182 (609)
.. .. ...+++.-++.|.+.+....++.....+.|| ++||.+.++......++..+
T Consensus 109 ~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~ 168 (434)
T PRK15075 109 YATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVF 168 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHH
Confidence 00 00 0123444477788777666666678889998 77999999877665555444
No 62
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.10 E-value=5.5e-08 Score=108.45 Aligned_cols=111 Identities=12% Similarity=0.031 Sum_probs=69.6
Q ss_pred hhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHH-HHHHH--HHHHhcCCcchhHHHHHHHHhhhcchhhhHH
Q 046386 427 LLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLP-TPVAF--CLLATSGNAVALQAGTSLIGLSSGFIFAAAV 502 (609)
Q Consensus 427 ~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~-~~~~~--ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P 502 (609)
..+...+...+|+++.| ++|++.+ ++. +.+..+. ...+. +.....++...++++..+.|+++|..++..+
T Consensus 291 ~~~~~~~~~~~~~~~~g~l~dr~gr----r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~ 364 (490)
T PRK10642 291 IIIAIMIGMLFVQPVMGLLSDRFGR----RPF--VILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMA 364 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc----HHH--HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556666788888888 5665532 222 2222211 11111 1122122234456667788999999999999
Q ss_pred HHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhcc
Q 046386 503 SITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSN 543 (609)
Q Consensus 503 ~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~ 543 (609)
.++.|+|..+.-|+-.|+.....-+++.+.+.+.|.+.|..
T Consensus 365 ~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~ 405 (490)
T PRK10642 365 STLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVEST 405 (490)
T ss_pred HHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999998888777653333345566788888888754
No 63
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.10 E-value=5.3e-08 Score=104.95 Aligned_cols=180 Identities=13% Similarity=0.092 Sum_probs=113.2
Q ss_pred hHHHHhhhHHHHHHHHHHHhhccccceeecc-hhHHHHHhc-CCc----ccchhhHHHHHhhhhhhhhccchhhhhhhcc
Q 046386 380 SARLLVLRLDFWLYYIAYFCGGAIGLVYSNN-LGQIAQSLG-ESS----RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVY 453 (609)
Q Consensus 380 ~~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n-~g~I~~al~-~~~----~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~ 453 (609)
+.++.++++++|.+.+..++.. ...+...+ ...-.+... ... ......++..+.+.++.+..| ++.||++
T Consensus 207 ~~~~~l~~~~~~~~~l~~~~~~-~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g---~l~~r~g 282 (396)
T TIGR00882 207 LALELFRQRKFWMFVLYVVGVA-CVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAP---LIINRIG 282 (396)
T ss_pred HHHHHHcCCcHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHH---HHHHHhc
Confidence 4577899999987655443321 11221211 122222211 111 122344555566777776666 4555554
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhH-HHhhhhhHHHHH
Q 046386 454 FARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNI-LITNIPIGSLVY 532 (609)
Q Consensus 454 ~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~-~~~a~~~gs~~~ 532 (609)
.+| ++.+..++.++...+....+++..+++...+.|++++...+..-..+.+.++.+.-++.++. ...+..+|+.++
T Consensus 283 ~~~--~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~ 360 (396)
T TIGR00882 283 AKN--ALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFL 360 (396)
T ss_pred cch--hHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHH
Confidence 333 33343444455544444345566677778888888887777777778888998888887765 345778899999
Q ss_pred HHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHH
Q 046386 533 GFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVL 586 (609)
Q Consensus 533 ~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~ 586 (609)
+.+.|.++|..+ |+.+|.+.+.+.++...++..
T Consensus 361 ~~l~G~l~~~~G---------------------~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 361 STLAGNMYDSIG---------------------FQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHhHHHHHHhcc---------------------cHHHHHHHHHHHHHHHHHHHH
Confidence 999999999764 999999998888777766654
No 64
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.09 E-value=6.7e-08 Score=117.99 Aligned_cols=125 Identities=14% Similarity=-0.012 Sum_probs=83.5
Q ss_pred ccccHHHHHHhCCChhh--hhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH-HhhcCcchhHH
Q 046386 59 SAYSSDLKSVLGVSQVQ--LNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLV-ISHVISLPYIL 134 (609)
Q Consensus 59 s~YS~~lk~~L~~sq~q--ln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~-~~~~~~~~~~~ 134 (609)
.+..+.+...++.++++ ...+..+-.++. .++.++|.+.|.+.+.-+++++.++..++..+..+. ..+ .+|.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~----~~~~ 105 (1146)
T PRK08633 30 ILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLG----WFWL 105 (1146)
T ss_pred HHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHc----cHHH
Confidence 44455566666766544 455666666665 456777999999977666666555444444332222 222 2566
Q ss_pred HHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHH
Q 046386 135 VFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAG 187 (609)
Q Consensus 135 l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~ 187 (609)
+++..++.|.+.+.+..+......+++| ++||.+.|+.-....++.++...+.
T Consensus 106 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~ 159 (1146)
T PRK08633 106 AFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALF 159 (1146)
T ss_pred HHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHH
Confidence 6667778888888888888888899998 6799999998888777666655553
No 65
>PRK10133 L-fucose transporter; Provisional
Probab=99.08 E-value=1.4e-07 Score=103.99 Aligned_cols=127 Identities=15% Similarity=0.220 Sum_probs=93.0
Q ss_pred cccccHHHHHHhCCChhhhhHHHHhhhcccc-hhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHH
Q 046386 58 FSAYSSDLKSVLGVSQVQLNYLATASDLGKL-FGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYILVF 136 (609)
Q Consensus 58 fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~-~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l~ 136 (609)
-+.+-|++|+.+|+|..|...+..+..+|.. ...+.|.+.|.+.+..++.+|.....+|..+..... ....++.++
T Consensus 45 ~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~---~a~~~~~ll 121 (438)
T PRK10133 45 NDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAA---EIMNYTLFL 121 (438)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH---hcCCHHHHH
Confidence 3446799999999999999999999888884 466779999999887777887777777765532111 112356666
Q ss_pred HHHHHhhcchhhhhhHHHHHHHHhcCCCCc-chhhhhhhhhhhhHHHHHHHH
Q 046386 137 FLCLLSGLSITWFNTVCFVLCIQNFPANRA-LALSLTVSFNGVSAAIYALAG 187 (609)
Q Consensus 137 ~~~~l~G~g~~~~~taalvT~~kNFP~~RG-~avgl~k~~~GLSaaI~s~i~ 187 (609)
...++.|.|.+..++++-.-..+..|++|+ ...++.-+++++++.+-..+.
T Consensus 122 ~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g 173 (438)
T PRK10133 122 VGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFG 173 (438)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777888988888777766655666676655 478888888888777755553
No 66
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.04 E-value=1.3e-08 Score=109.42 Aligned_cols=180 Identities=19% Similarity=0.183 Sum_probs=124.3
Q ss_pred HHHhhhHHHHHHHHHHHhhccccceeecchhHHHHHhc-CCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhH
Q 046386 382 RLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQSLG-ESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTG 458 (609)
Q Consensus 382 ~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~al~-~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~ 458 (609)
+...+++|-|.+-+.++..-|.=+-+.+-.++..+... ..+ ++.....+..+.+.+-|-..| +||.+ +-.|..
T Consensus 212 ~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~----Gg~rv~ 287 (417)
T COG2223 212 KAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI----GGRRVT 287 (417)
T ss_pred HHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc----cchhHH
Confidence 45677889998777765432222224445556666543 222 344788899999999999999 56655 444443
Q ss_pred HHHHHHHHHHHHHHHHHhcC------Cc-c----hhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhh
Q 046386 459 WLTIALLPTPVAFCLLATSG------NA-V----ALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPI 527 (609)
Q Consensus 459 ~l~~~~~~~~~~~ll~~~~~------~~-~----~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~ 527 (609)
+. .+..++++..++.... .+ . .+.......|++.|+.|-..|.+-.+ +-|.-=|++...-++
T Consensus 288 ~~--~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-----~~G~v~G~vga~G~l 360 (417)
T COG2223 288 LA--VFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-----ETGAVTGIVGAIGGL 360 (417)
T ss_pred HH--HHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-----hhhHHHHHHHHhccc
Confidence 33 3344444443332111 11 1 12333566788888888888888766 777888888888899
Q ss_pred HHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046386 528 GSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLLFLRTR 592 (609)
Q Consensus 528 gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l~~r~r 592 (609)
|++..++..|..||..+ .|...|.+....+++++++...++.|.|
T Consensus 361 GGf~lp~~~g~~~~~tg--------------------~~~~~f~~~~~~~~~a~v~~~~~y~r~~ 405 (417)
T COG2223 361 GGFFLPLAFGVSLDLTG--------------------SYTGAFMLLLAFYLVALVLTWALYARRR 405 (417)
T ss_pred cccchhHHHHHHHHhcc--------------------cHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999987 5899999999999888888888887765
No 67
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.03 E-value=1.4e-07 Score=101.32 Aligned_cols=158 Identities=11% Similarity=0.008 Sum_probs=94.1
Q ss_pred hHHHHhhhHHHHHHHHHHHhhccccce-eecchhHHHHHhcCCcccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchh
Q 046386 380 SARLLVLRLDFWLYYIAYFCGGAIGLV-YSNNLGQIAQSLGESSRTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFART 457 (609)
Q Consensus 380 ~~~~~l~~~~Fwll~~~~~~g~g~Glm-~I~n~g~I~~al~~~~~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~ 457 (609)
+.++.++++.+|.+.+..++.. .+.+ +.+......++.+.+. ..++.+-..+.++-+... +.+++.||++..|.
T Consensus 197 ~~~~i~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~g~s~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~ 272 (382)
T PRK11128 197 AWKALLKEPTVWRFLLCVSLLQ-GSHAAYYGFSAIYWQAAGYSA---STIGYLWSLGVVAEVLIFAFSNRLFRRWSARDL 272 (382)
T ss_pred hHHHHHcChhHHHHHHHHHHHH-HHhHhHHHHHHHHHHHCCCCH---hHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Confidence 4578899999998766554432 2222 2223333444455432 122333223334444433 45577777654333
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHH-hhhhhHHHHHHHHH
Q 046386 458 GWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILI-TNIPIGSLVYGFLA 536 (609)
Q Consensus 458 ~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~-~a~~~gs~~~~~i~ 536 (609)
+.+..+.+++..+++...+++..+++..++.|+++|......-..+.+.- ..+.++..+... .+..+|..+++.++
T Consensus 273 --l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~ig~~i~ 349 (382)
T PRK11128 273 --LLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAARP-GSEVIRLQALYSALAMGGSIAIMTVLS 349 (382)
T ss_pred --HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-HhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444455555554443455566777788889999987776666666664 355677777664 44556778889999
Q ss_pred HHHhhccC
Q 046386 537 AIVYDSNV 544 (609)
Q Consensus 537 g~iyD~~~ 544 (609)
|.+||.-+
T Consensus 350 G~l~~~~g 357 (382)
T PRK11128 350 GFLYQHLG 357 (382)
T ss_pred HHHHHhcc
Confidence 99999764
No 68
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.01 E-value=1.3e-07 Score=116.01 Aligned_cols=159 Identities=12% Similarity=0.009 Sum_probs=102.4
Q ss_pred hHHHHhhhHHHHHHHHHHHhhccccceeecchhHHHHH-hcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhcccchh
Q 046386 380 SARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQS-LGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFART 457 (609)
Q Consensus 380 ~~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~a-l~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~ 457 (609)
..+...+++.+|.+.+.+++....+-++...+....+. ++.+. ......+..++...+|.++.| ++.+++...+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g---~l~~~~~~~~~ 293 (1140)
T PRK06814 217 LLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLAS---KLSEGRITLLY 293 (1140)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHH---HHhCCceeeee
Confidence 34667788899987776655433333333345555554 44432 345567788888888888877 33333222222
Q ss_pred HHHHHHHHHHHHHHHHHHhc--------------------CCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhh
Q 046386 458 GWLTIALLPTPVAFCLLATS--------------------GNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVN 517 (609)
Q Consensus 458 ~~l~~~~~~~~~~~ll~~~~--------------------~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~n 517 (609)
..+ ..+.+++..+.+... ++...+.+..+++|++.|..+...++++.+....++.|..
T Consensus 294 ~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v 371 (1140)
T PRK06814 294 VPI--GALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARV 371 (1140)
T ss_pred ehH--HHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceee
Confidence 111 111222211111101 3334466778889999999999999999999999999999
Q ss_pred hhHHHhhhhhHHHHHHHHHHHHhhcc
Q 046386 518 HNILITNIPIGSLVYGFLAAIVYDSN 543 (609)
Q Consensus 518 yg~~~~a~~~gs~~~~~i~g~iyD~~ 543 (609)
+|+..+...+|..+++.+.|.++|..
T Consensus 372 ~g~~~~~~~~~~~ig~~~~g~l~~~~ 397 (1140)
T PRK06814 372 IAANNVLNAAFMVAGTIILALLQALG 397 (1140)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99998888888888888889998743
No 69
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.98 E-value=5.6e-07 Score=100.71 Aligned_cols=179 Identities=16% Similarity=0.165 Sum_probs=105.2
Q ss_pred HHHHhhhHHHHHHHHHHHhhccccceeecc-hhH-HHHHhcCCccc-chhhH-HHHHhhhhhhhhcc-chhhhhhhcccc
Q 046386 381 ARLLVLRLDFWLYYIAYFCGGAIGLVYSNN-LGQ-IAQSLGESSRT-TTLLT-LYSSFSFFGRLLSA-APDYMRAKVYFA 455 (609)
Q Consensus 381 ~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n-~g~-I~~al~~~~~~-~~~VS-l~Si~n~~GRl~~g-~SD~l~~~~~~~ 455 (609)
.++.++++++|.+.+..++- ..+....++ ..+ +.+.++.+... ....+ +..+...+|.++.| ++|++ +..
T Consensus 215 l~~~~~~~~~~~~ll~~~l~-~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~----g~~ 289 (491)
T PRK11010 215 LRDFFGRNNAWLILLLIVLY-KLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL----SLF 289 (491)
T ss_pred HHHHHcCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hHH
Confidence 45567777777654443221 122222222 122 23445553332 22222 33356677888877 45554 322
Q ss_pred hhHHHHHHHHHHHH---HHHHHHhcC-CcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHH
Q 046386 456 RTGWLTIALLPTPV---AFCLLATSG-NAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLV 531 (609)
Q Consensus 456 R~~~l~~~~~~~~~---~~ll~~~~~-~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~ 531 (609)
|... +..+++.+ .+.+++..+ +...+.....+..+++|..++.+.+...++...+.-++.||++.....+|+.+
T Consensus 290 ~~l~--i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~ 367 (491)
T PRK11010 290 RALM--IFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVY 367 (491)
T ss_pred HHHH--HHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHH
Confidence 3322 21222222 222222222 11223444556566677667777777778888777899999998888999998
Q ss_pred HHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHH
Q 046386 532 YGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLL 587 (609)
Q Consensus 532 ~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l 587 (609)
.+.+.|.++|..+ |+..|.+.+.+++.++++...+
T Consensus 368 ~~~~~G~l~~~~G---------------------~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 368 VGPVAGWFVEAHG---------------------WPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHhC---------------------hHHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999653 8999999999998887777665
No 70
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.97 E-value=2.5e-07 Score=98.37 Aligned_cols=125 Identities=14% Similarity=0.078 Sum_probs=89.7
Q ss_pred cccccccHHHHHHhCCChhhhhHHHHhhhcccch-hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHH
Q 046386 56 FDFSAYSSDLKSVLGVSQVQLNYLATASDLGKLF-GWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYIL 134 (609)
Q Consensus 56 Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~-G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~ 134 (609)
..+.-.-|++++++|+|..|.+.+..+..+|..+ .++.|.+.|...+..++.++.++..++....... . .++.
T Consensus 8 ~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~--~----~~~~ 81 (377)
T PRK11102 8 DMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA--Q----TIDQ 81 (377)
T ss_pred HHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH--c----cHHH
Confidence 3455666788899999999999998888887744 5777999999877666677666655555443221 1 2455
Q ss_pred HHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHH
Q 046386 135 VFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALA 186 (609)
Q Consensus 135 l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i 186 (609)
+....++.|.+.+..+........+.+| ++||.+.|+.-...++++.+...+
T Consensus 82 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 134 (377)
T PRK11102 82 LIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPII 134 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555667777767666666667788898 568999999887777777665554
No 71
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.95 E-value=6.1e-07 Score=97.14 Aligned_cols=115 Identities=9% Similarity=-0.007 Sum_probs=69.6
Q ss_pred HhCCChhhhhHHHHhhhcccchhhhhhhhhhhhhH------HHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHH
Q 046386 68 VLGVSQVQLNYLATASDLGKLFGWLSGLALMYFPL------WVVLFMAAFMGFFGYGLQWLVISHVISLPYILVFFLCLL 141 (609)
Q Consensus 68 ~L~~sq~qln~I~~a~~lG~~~G~~sGll~~~~P~------~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l~~~~~l 141 (609)
..|+|-+|+-.+....-. ..+..+-|.+.|..+. ...+.++.+...+........ .. ...+|.+..+.++
T Consensus 28 ~~g~~~~~ig~~~~~~~~-~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~--~~-~~~~~~l~~~~~~ 103 (402)
T PRK11902 28 VEGLDIQTIGFFSLVGQA-YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFC--PP-HAALWPLAGLAVL 103 (402)
T ss_pred HcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhc--Cc-cchHHHHHHHHHH
Confidence 459999997666555554 4667777999999831 122333333333333333221 11 1234555555445
Q ss_pred hhcchhhhhhHHHHHHHHhcCCC-CcchhhhhhhhhhhhHHHHHHH
Q 046386 142 SGLSITWFNTVCFVLCIQNFPAN-RALALSLTVSFNGVSAAIYALA 186 (609)
Q Consensus 142 ~G~g~~~~~taalvT~~kNFP~~-RG~avgl~k~~~GLSaaI~s~i 186 (609)
.+...+..+.+.-.-..+.+|++ ||.+.++....++++..+...+
T Consensus 104 ~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l 149 (402)
T PRK11902 104 VAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGL 149 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHH
Confidence 55444555556556678889955 9999999988877776665554
No 72
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.90 E-value=1.9e-07 Score=100.60 Aligned_cols=377 Identities=17% Similarity=0.149 Sum_probs=204.0
Q ss_pred ccccccHHHHHHhCCChhhhhHHHHhhhcccchh-hhhhhhhhhhhHHH-----HHHHHHHHHHHHHHHHHHHHhhcCcc
Q 046386 57 DFSAYSSDLKSVLGVSQVQLNYLATASDLGKLFG-WLSGLALMYFPLWV-----VLFMAAFMGFFGYGLQWLVISHVISL 130 (609)
Q Consensus 57 ~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~G-~~sGll~~~~P~~~-----vllig~~~~~~GY~~~~l~~~~~~~~ 130 (609)
.|++=.|.+++++++|-+|+..++++-.+.=-++ ++.|.+.|.-.|.. +++-|-+..+.|+..
T Consensus 47 nF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~----------- 115 (448)
T COG2271 47 NFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSP----------- 115 (448)
T ss_pred hHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhh-----------
Confidence 5888899999999999999888887776642221 35588889874432 223333333333332
Q ss_pred hhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHhhhCCCChhHHHHHHHHHHHHH
Q 046386 131 PYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGNAINPSSHALYLLLNALIPLIT 209 (609)
Q Consensus 131 ~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~~~f~~d~~~fLllla~~p~~v 209 (609)
+.+.+.++..+-|.=|++---+|-+|-+++|| +.||+..|+--+..-++|++-..+...
T Consensus 116 s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~l-------------------- 175 (448)
T COG2271 116 SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALL-------------------- 175 (448)
T ss_pred HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHH--------------------
Confidence 23444445555554455555677799999999 569999999999999999987777520
Q ss_pred HHhhhhccccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHHHHHHHHHHHHhhcccccccccc
Q 046386 210 SLAALIPILRQPSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRLLFGGALFLLMFPLCIPGIVYAR 289 (609)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~~~~g~~~ll~~p~~~p~~~~~~ 289 (609)
+.+. . ..+-...|.+=.+++++++++ .+...
T Consensus 176 a~~~-------~---------~~~w~~~f~~pgiiaiival~----------------------~~~~~----------- 206 (448)
T COG2271 176 AFFA-------F---------HGGWRAAFYFPGIIAIIVALI----------------------LLFLL----------- 206 (448)
T ss_pred HHHH-------h---------ccchhHHHHHHHHHHHHHHHH----------------------HHHHh-----------
Confidence 0111 0 001122232222222222221 11100
Q ss_pred cccccccccccccCCCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCcccccccccccccccc-cccCCCccccccc
Q 046386 290 DWFKRTIHSSFRLDGSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMTYSLTRTK-SFEKGGCCETIIG 368 (609)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 368 (609)
..+|+ . ..-++.|+-.+ |+. |. ++++
T Consensus 207 -----rd~Pq-------s--~GLP~ie~~~~-------------d~~-----------------e~~~~~~--------- 233 (448)
T COG2271 207 -----RDRPQ-------S--EGLPPIEEYRG-------------DPL-----------------EIYEEEK--------- 233 (448)
T ss_pred -----CCCcc-------c--cCCCCHHHhhc-------------Cch-----------------hhhhhhc---------
Confidence 00000 0 00011111000 000 00 0000
Q ss_pred ccchhhcccCchHHH-----HhhhHHHHHHHHHHHhhccccceeecchhHHHHH--hcCCc-ccchhhHHHHHhhhhhhh
Q 046386 369 KDQLAMLGEEHSARL-----LVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQS--LGESS-RTTTLLTLYSSFSFFGRL 440 (609)
Q Consensus 369 ~~~~~~~~~~~~~~~-----~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~a--l~~~~-~~~~~VSl~Si~n~~GRl 440 (609)
.++..+.+| .|+++--|++-++.++--- -=.-|++=+++.-. .+.+. .+...++++=+....|-+
T Consensus 234 ------~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYi-vR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~L 306 (448)
T COG2271 234 ------ENEGLTAWQIFVKYVLKNKLIWLLALANVFVYV-VRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTL 306 (448)
T ss_pred ------cCCCccHHHHHHHHHHcChHHHHHHHHHHHHHH-HHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHH
Confidence 001123333 7899999998887765210 01235555555433 23332 356788999999999999
Q ss_pred hcc-chhhhhhhcccchhHHHHH-HHHHHHHHHHHHHhcCCc--chhHHHHHHHHh-hhcchhhhHHHHHHHhhCCCC-c
Q 046386 441 LSA-APDYMRAKVYFARTGWLTI-ALLPTPVAFCLLATSGNA--VALQAGTSLIGL-SSGFIFAAAVSITSELFGPNS-V 514 (609)
Q Consensus 441 ~~g-~SD~l~~~~~~~R~~~l~~-~~~~~~~~~ll~~~~~~~--~~l~~~s~liG~-~yG~~f~~~P~i~se~FG~k~-f 514 (609)
++| +||++-+. |+....+ .++...++..+.-..++. ....++-.++|+ =||=+ ..-.+.+--|+.|+ -
T Consensus 307 l~GwlSDklfkg----rR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPq--mLiGl~a~e~~pK~Aa 380 (448)
T COG2271 307 LAGWLSDKLFKG----RRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQ--MLIGLAAAEFVPKKAA 380 (448)
T ss_pred HHHHHHHHhccc----ccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHH--HHHHHHHhccccHhhc
Confidence 999 78887542 2222222 222222222222212222 223334455666 56666 44445555566554 4
Q ss_pred hhhhhHH-HhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046386 515 GVNHNIL-ITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLLFLRTRH 593 (609)
Q Consensus 515 g~nyg~~-~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l~~r~r~ 593 (609)
||.=|+. ..++-.|+...+...|.+-|..+ ....|+++.+.++++.++.+.++.++++
T Consensus 381 GtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~g---------------------W~g~Fi~~~~~a~l~~lll~~~~~~~~~ 439 (448)
T COG2271 381 GTATGFVGLFAYLIGAALAGLPLGYIADTWG---------------------WDGGFIVLSIAALLAILLLLPVWNAEER 439 (448)
T ss_pred cchhchhhhHHHHhhHHhcCCcceeeEecCC---------------------CcchHHHHHHHHHHHHHHHHHHHhhcch
Confidence 6666666 33333355555556666666622 5567888888888888888888777777
Q ss_pred hHHHHHh
Q 046386 594 AYDCFER 600 (609)
Q Consensus 594 ~y~~~~~ 600 (609)
.+++..+
T Consensus 440 ~~~~~~~ 446 (448)
T COG2271 440 KIRDEKK 446 (448)
T ss_pred hhhhhhc
Confidence 7766543
No 73
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.88 E-value=9.3e-08 Score=106.27 Aligned_cols=364 Identities=16% Similarity=0.170 Sum_probs=218.8
Q ss_pred HHHhCCChhhhhHHHHhhhcccchhhhh-hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhc
Q 046386 66 KSVLGVSQVQLNYLATASDLGKLFGWLS-GLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYILVFFLCLLSGL 144 (609)
Q Consensus 66 k~~L~~sq~qln~I~~a~~lG~~~G~~s-Gll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l~~~~~l~G~ 144 (609)
+.++++|++|-+.|=.+...|..+|.+. |.+++.++...++..+.++..++-.+.=++.... +|.+++.=++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~----~~~~~~~R~lqGl 140 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIG----FYLLLVLRFLQGL 140 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhc----chhhHHHHHHhHH
Confidence 7799999999999999999999777665 9999998777777777777766666543333332 3545555588898
Q ss_pred chhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHhhhCCCChhHHHHHHHHHHHHHHHhhhhccccCCCC
Q 046386 145 SITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGNAINPSSHALYLLLNALIPLITSLAALIPILRQPSL 223 (609)
Q Consensus 145 g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~~~f~~d~~~fLllla~~p~~v~~~~~~~~~~~~~~ 223 (609)
+++..+.+.-.-.+|+.| ++|+..++++.++.-+|..+--.+...+...
T Consensus 141 ~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s------------------------------ 190 (466)
T KOG2532|consen 141 GQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES------------------------------ 190 (466)
T ss_pred HHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc------------------------------
Confidence 888778887788899999 8899999999999977777655554322110
Q ss_pred CCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHHHHHHHHHHHHhhcccccccccccccccccccccccC
Q 046386 224 DPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRLLFGGALFLLMFPLCIPGIVYARDWFKRTIHSSFRLD 303 (609)
Q Consensus 224 ~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~~~~g~~~ll~~p~~~p~~~~~~~~~~~~~~~~~~~~ 303 (609)
. -.-...|..+..+.++..+. ... .. . ..| +
T Consensus 191 -~------~GW~sifY~~g~~g~i~~~~----------------------w~~-~~---------~------d~P----~ 221 (466)
T KOG2532|consen 191 -S------LGWPSIFYVFGIVGLIWFIL----------------------WFL-FY---------S------DSP----S 221 (466)
T ss_pred -C------CCCchHHHHHHHHHHHHHHH----------------------HHH-Hh---------c------CCc----c
Confidence 0 12223343332222111100 000 00 0 000 0
Q ss_pred CCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCcccccccccccccccccccCCCcccccccccchhhcccCchHHH
Q 046386 304 GSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMTYSLTRTKSFEKGGCCETIIGKDQLAMLGEEHSARL 383 (609)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (609)
++ +.+ .+ +|+..-+ ++ +. ++ + .+ .+.+.+.++
T Consensus 222 ~h--~~i--s~----~El~~I~---------~~--------------k~-~~--~---------~~-----~~~~vP~~~ 253 (466)
T KOG2532|consen 222 KH--PNI--SE----KELKYIE---------KG--------------KS-EA--H---------VK-----KKPPVPYKA 253 (466)
T ss_pred cC--CCC--CH----HHHHHHH---------hc--------------cc-cc--c---------cC-----CCCCCCHHH
Confidence 00 000 00 0000000 00 00 00 0 00 013457899
Q ss_pred HhhhHHHHHHHHHHHhhccccceeecchhH--HHHHhcCC-cccchhhHHHHHhhhhhhhhcc-chhhhhhhccc----c
Q 046386 384 LVLRLDFWLYYIAYFCGGAIGLVYSNNLGQ--IAQSLGES-SRTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYF----A 455 (609)
Q Consensus 384 ~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~--I~~al~~~-~~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~----~ 455 (609)
+++++.+|.+|++-++.. .|..++-+-.+ +-+-++.+ +....+.++=-+...+-++++| ++|++..| .. .
T Consensus 254 i~ts~~vwai~~~~f~~~-~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~-~ls~t~~ 331 (466)
T KOG2532|consen 254 ILTSPPVWAIWISAFGGN-WGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFR-ILSETTV 331 (466)
T ss_pred HHcCHHHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCchHhH
Confidence 999999999999998754 45543333333 33335653 2355677788888999999999 89999876 33 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCc-c-----hhHHHHHHHHhhhcchhhhHHHHHHHhh-CCCCchhhhhHHHhhhhhH
Q 046386 456 RTGWLTIALLPTPVAFCLLATSGNA-V-----ALQAGTSLIGLSSGFIFAAAVSITSELF-GPNSVGVNHNILITNIPIG 528 (609)
Q Consensus 456 R~~~l~~~~~~~~~~~ll~~~~~~~-~-----~l~~~s~liG~~yG~~f~~~P~i~se~F-G~k~fg~nyg~~~~a~~~g 528 (609)
|..+-++.+...++.++.+...+.. . .+.++.++.|++.+|..-. ..- ..+|-+...|+..+...++
T Consensus 332 rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~------~~~~apq~a~~l~g~~~~~~~~~ 405 (466)
T KOG2532|consen 332 RKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKN------HQDIAPQHAGFVMGIINFVGALA 405 (466)
T ss_pred HHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhh------hhhccchHHHHHHHHHHHHHHHH
Confidence 3334444444444444444333321 1 1223344455555554332 222 6788889999998888899
Q ss_pred HHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHH
Q 046386 529 SLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVL 586 (609)
Q Consensus 529 s~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~ 586 (609)
+++.|.+.|.+-..+. ++ =-+..|++.+++.+++.++=.+
T Consensus 406 ~~~~P~~vg~~~~~~t-~~-----------------eW~~VF~i~a~i~~~~~i~f~~ 445 (466)
T KOG2532|consen 406 GFIAPLLVGIIVTDNT-RE-----------------EWRIVFLIAAGILIVGNIIFLF 445 (466)
T ss_pred HHHHHHheeeEeCCCC-HH-----------------HHHHHHHHHHHHHHHhchheeE
Confidence 9999999887773111 11 3789999999988887744333
No 74
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.85 E-value=1.8e-06 Score=93.23 Aligned_cols=141 Identities=12% Similarity=0.121 Sum_probs=91.4
Q ss_pred HhcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhh
Q 046386 417 SLGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSS 494 (609)
Q Consensus 417 al~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~y 494 (609)
.++.+. .....+++..+...+++++.| ++|++.+| |. +........+........+++..+.+...+.++++
T Consensus 246 ~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 319 (393)
T PRK15011 246 ELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKR----FL--MRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYI 319 (393)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH----HH--HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 344432 233455555666777888888 56665332 22 22222121222222222233444555566778889
Q ss_pred cchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHH
Q 046386 495 GFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWG 574 (609)
Q Consensus 495 G~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a 574 (609)
|..++..++...|.+. ++-|+..++......+|..+++.+.|.++|..+ |+..|.+.+
T Consensus 320 g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g---------------------~~~~~~~~~ 377 (393)
T PRK15011 320 GILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWN---------------------YHAVFWFAL 377 (393)
T ss_pred HHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh---------------------hHHHHHHHH
Confidence 9888999999999997 568999888877778899999999999999653 888888877
Q ss_pred HHHHHHHHHHH
Q 046386 575 CVSVVGLAASV 585 (609)
Q Consensus 575 ~~~~~~~~~sl 585 (609)
+.+++++++.+
T Consensus 378 ~~~~~~~~~~~ 388 (393)
T PRK15011 378 VMIIATLFCLL 388 (393)
T ss_pred HHHHHHHHHHH
Confidence 77666555444
No 75
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.77 E-value=1.7e-05 Score=86.63 Aligned_cols=126 Identities=14% Similarity=0.107 Sum_probs=84.4
Q ss_pred ccccccccHHHHHHhCCChhhhhHHHHhhhcccc-hhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhH
Q 046386 55 NFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKL-FGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYI 133 (609)
Q Consensus 55 ~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~-~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~ 133 (609)
...+.--=|++.+.+|.|+.+.+.....--+|.. ..++.|.+.|.+++..+++++.+...++.... ... ..++
T Consensus 32 ~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~--~~a----~~~~ 105 (413)
T PRK15403 32 TDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAAT--LFT----TSMT 105 (413)
T ss_pred HHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHH--HHc----CCHH
Confidence 3444444457889999999998877777677663 45667999999977766666544443333222 111 2345
Q ss_pred HHHHHHHHhhcchhhhhhHHHHHHHHhcCCC-CcchhhhhhhhhhhhHHHHHHH
Q 046386 134 LVFFLCLLSGLSITWFNTVCFVLCIQNFPAN-RALALSLTVSFNGVSAAIYALA 186 (609)
Q Consensus 134 ~l~~~~~l~G~g~~~~~taalvT~~kNFP~~-RG~avgl~k~~~GLSaaI~s~i 186 (609)
.+...-++.|.+.++....+.......||++ |+.+.|+.....+++..+...+
T Consensus 106 ~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 159 (413)
T PRK15403 106 QFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLS 159 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6656667778777766666666677789854 6888888888887777665444
No 76
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.76 E-value=2.2e-06 Score=90.76 Aligned_cols=123 Identities=7% Similarity=-0.093 Sum_probs=71.7
Q ss_pred ccHHHHHHhCCChhhhhHHHHhhhcccchhhhhhhhhhhhh-----H-HHHHHHHHHHHHHHHHHHHHHHhhcCcchhHH
Q 046386 61 YSSDLKSVLGVSQVQLNYLATASDLGKLFGWLSGLALMYFP-----L-WVVLFMAAFMGFFGYGLQWLVISHVISLPYIL 134 (609)
Q Consensus 61 YS~~lk~~L~~sq~qln~I~~a~~lG~~~G~~sGll~~~~P-----~-~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~ 134 (609)
=-|.+.+++|+|.+|+..++... +...++.+.|.+.|... + ...++.+.+...+..... .+... ....|.
T Consensus 10 ~~~~~~~~~g~s~~~~g~~~~~~-~~~~~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l--~~~~~-~~~l~~ 85 (356)
T TIGR00901 10 TLPYWLRSKNVSLKTIGFFSLVG-LPYSLKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLIL--SFLVP-STDLPL 85 (356)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHH-HHHHHHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHH--HcCCc-chhHHH
Confidence 34677888999999977776553 32234778899999972 1 222223322222222121 11111 122344
Q ss_pred HHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHH
Q 046386 135 VFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAG 187 (609)
Q Consensus 135 l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~ 187 (609)
+....++.+...+..+.+.-.-..+.+| ++||.+.|+.-..+.++..+...+.
T Consensus 86 l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~ 139 (356)
T TIGR00901 86 LAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLA 139 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHH
Confidence 4444444455445555554455678896 7899999998888888777665553
No 77
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.74 E-value=9.5e-07 Score=95.98 Aligned_cols=159 Identities=13% Similarity=0.151 Sum_probs=96.0
Q ss_pred hHHHHhhhHHHHHHHHHHHhhccccceeecchhHH-HHH-hcCCcccchhhHHHHHhhhhhhhhccchhhhhhhcccchh
Q 046386 380 SARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQI-AQS-LGESSRTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFART 457 (609)
Q Consensus 380 ~~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I-~~a-l~~~~~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~ 457 (609)
..++.++++.||.+.+..++.. .+....+..... .+. ++.....+...++..+...++.++.+ ++.+|++.++.
T Consensus 214 ~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~---~l~~r~g~~~~ 289 (437)
T TIGR00792 214 IFKALFKNDQLLILCLAYLFYN-LAFNIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFP---RLVKKFGRKIL 289 (437)
T ss_pred HHHHHhCCHHHHHHHHHHHHHH-HHHHHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHH---HHHHHhCcHHH
Confidence 3467789999998766655432 222222211111 111 11111223344455566666766666 55555553333
Q ss_pred HHHHHHHHHHHHHHHHHHhc-CCcchhHHHHHHHHhhhcchhhhHHHHHHHh-------hCCCCchhhhhHHHhhhhhHH
Q 046386 458 GWLTIALLPTPVAFCLLATS-GNAVALQAGTSLIGLSSGFIFAAAVSITSEL-------FGPNSVGVNHNILITNIPIGS 529 (609)
Q Consensus 458 ~~l~~~~~~~~~~~ll~~~~-~~~~~l~~~s~liG~~yG~~f~~~P~i~se~-------FG~k~fg~nyg~~~~a~~~gs 529 (609)
+.+..++..++.+++... ++...+.+..++.|+++|..+.+..++++|. .|.++-|+.+|+..+..-+|.
T Consensus 290 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~ 367 (437)
T TIGR00792 290 --FAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQ 367 (437)
T ss_pred --HHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHH
Confidence 223333444444443322 2234456667888999999999999999887 467788999999988888888
Q ss_pred HHHHHHHHHHhhccC
Q 046386 530 LVYGFLAAIVYDSNV 544 (609)
Q Consensus 530 ~~~~~i~g~iyD~~~ 544 (609)
.+++.+.|.+.|..+
T Consensus 368 ~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 368 ALAGFLVGLILGIIG 382 (437)
T ss_pred HHHHHHHHHHHHHcC
Confidence 888889999888643
No 78
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.64 E-value=2.3e-05 Score=84.28 Aligned_cols=348 Identities=16% Similarity=0.159 Sum_probs=203.8
Q ss_pred ccccHHHHHHhCCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHH
Q 046386 59 SAYSSDLKSVLGVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYILVFF 137 (609)
Q Consensus 59 s~YS~~lk~~L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l~~ 137 (609)
..-=|++|+.+++|+.|...+-++-=-|- ..++++|.+.+.+.-..-+++|..+..+|=.+.|-+-..+ +|.+++
T Consensus 33 diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~----~y~~FL 108 (422)
T COG0738 33 DILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSK----SYGFFL 108 (422)
T ss_pred hhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhh----hHHHHH
Confidence 45569999999999999888887776554 3355667777776555555565555556655555554444 455555
Q ss_pred H-HHHhhcchhhhhhHHHHHHHHhcCCC-CcchhhhhhhhhhhhHHHHHHHHhhhCCCChhHHHHHHHHHHHHHHHhhhh
Q 046386 138 L-CLLSGLSITWFNTVCFVLCIQNFPAN-RALALSLTVSFNGVSAAIYALAGNAINPSSHALYLLLNALIPLITSLAALI 215 (609)
Q Consensus 138 ~-~~l~G~g~~~~~taalvT~~kNFP~~-RG~avgl~k~~~GLSaaI~s~i~~~~f~~d~~~fLllla~~p~~v~~~~~~ 215 (609)
. .++.|.|.+...|++-.-...+.|.. .-.=..+.-+++||.+.+...+...+.-.+
T Consensus 109 ~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~--------------------- 167 (422)
T COG0738 109 VALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSG--------------------- 167 (422)
T ss_pred HHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh---------------------
Confidence 4 48889999999999988889999853 344478899999999999888876542110
Q ss_pred ccccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHHHHHHHHHHHHhhcccccccccccccccc
Q 046386 216 PILRQPSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRLLFGGALFLLMFPLCIPGIVYARDWFKRT 295 (609)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~~~~g~~~ll~~p~~~p~~~~~~~~~~~~ 295 (609)
..+..++ ......+.-.. .-+. .....+.+.++++.. -.. ..
T Consensus 168 ------~~~~~~~----~~~~~~~~~~~-~~v~---------------~pYl~~~~~lvll~v----~~~--------~~ 209 (422)
T COG0738 168 ------VALTMSA----AQILAIKGADA-SSVQ---------------FPYLILAGLLVLLAV----LIL--------LS 209 (422)
T ss_pred ------hhhccCH----HHHHHHHHHHH-Hhhh---------------hHHHHHHHHHHHHHH----HHH--------hc
Confidence 0000000 00011100000 0000 011111111111110 000 00
Q ss_pred cccccccCCCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCcccccccccccccccccccCCCcccccccccchhhc
Q 046386 296 IHSSFRLDGSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMTYSLTRTKSFEKGGCCETIIGKDQLAML 375 (609)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (609)
+ .|+. ++ +++ + .. .
T Consensus 210 k--------------~p~~-~~----------------~~~-----------------~---~~---------------~ 223 (422)
T COG0738 210 K--------------LPDL-QV----------------AAP-----------------S---LG---------------A 223 (422)
T ss_pred c--------------CCcC-Cc----------------ccc-----------------c---cc---------------c
Confidence 0 0000 00 000 0 00 0
Q ss_pred ccCchHHHHhhhHHHHHHHHHHHhhccccceeecchhHHHHH-hcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhcc
Q 046386 376 GEEHSARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQS-LGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVY 453 (609)
Q Consensus 376 ~~~~~~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~a-l~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~ 453 (609)
.++.+..++++++.+|.--+..+|=.|.-.++=+-+-+...+ ++.++ .++.++|.+=..=.+||+.+- .+.+|++
T Consensus 224 ~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~---~lm~~~~ 300 (422)
T COG0738 224 SGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGS---ALMSRIK 300 (422)
T ss_pred cccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhC
Confidence 011145678999999998888888777666665666666666 44433 356688888888999996542 4444555
Q ss_pred cchhHHHHHHHHHHHHHHHHH-HhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHH
Q 046386 454 FARTGWLTIALLPTPVAFCLL-ATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVY 532 (609)
Q Consensus 454 ~~R~~~l~~~~~~~~~~~ll~-~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~ 532 (609)
..|.. .+. .+..+..++. +..+. ..-..+..++|+..+.+|.+.-++..+..| +|=+.-=+++ ....+|+-+-
T Consensus 301 ~~k~L--af~-a~~~ill~~~~~l~~g-~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~~l-~maivGGAii 374 (422)
T COG0738 301 PEKYL--AFY-ALIAILLLLAVALIGG-VVALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSGLL-VMAIVGGAII 374 (422)
T ss_pred HHHHH--HHH-HHHHHHHHHHHHHhcC-hHHHHHHHHHHHHhHHHHHHHHHHHHhccC-ccccccceee-eeheecchHH
Confidence 44442 221 1122222222 22333 444455677899999999999999999999 6655555555 4445788888
Q ss_pred HHHHHHHhhccC
Q 046386 533 GFLAAIVYDSNV 544 (609)
Q Consensus 533 ~~i~g~iyD~~~ 544 (609)
|.+.|.+-|..+
T Consensus 375 P~l~G~i~d~~g 386 (422)
T COG0738 375 PPLQGVIADMFG 386 (422)
T ss_pred HHHHHHHHHhhh
Confidence 999999999875
No 79
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.62 E-value=1.8e-05 Score=85.21 Aligned_cols=177 Identities=12% Similarity=0.031 Sum_probs=107.6
Q ss_pred HHHHhhhHHHHHHHHHHHhhccccceeecchhHHHHHhcCCcc-cchhhHHHH-HhhhhhhhhccchhhhhhhcccchhH
Q 046386 381 ARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQSLGESSR-TTTLLTLYS-SFSFFGRLLSAAPDYMRAKVYFARTG 458 (609)
Q Consensus 381 ~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~al~~~~~-~~~~VSl~S-i~n~~GRl~~g~SD~l~~~~~~~R~~ 458 (609)
.++.+|++.+|.+.+..++....--.+..-.....+++|.+.+ .....++.. +...+|.+..| ++.||++.+|..
T Consensus 201 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g---~l~~r~g~~~~l 277 (390)
T TIGR02718 201 LFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGA---WLVRRAGLWRTF 277 (390)
T ss_pred HHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHH---HHHHHhhHHHHH
Confidence 4678888888876665544322111122223344555665332 233333333 24556676665 556665543332
Q ss_pred HHHHHHHHHHHHHHH-HH--h---cCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCC-CCchhhhhHHHhhhhhHHHH
Q 046386 459 WLTIALLPTPVAFCL-LA--T---SGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGP-NSVGVNHNILITNIPIGSLV 531 (609)
Q Consensus 459 ~l~~~~~~~~~~~ll-~~--~---~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~-k~fg~nyg~~~~a~~~gs~~ 531 (609)
.+..++..+..++ +. . .+.+..++....+.++++|..+..+.+.+.+..+. ++.|+.+++......+|..+
T Consensus 278 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~ 355 (390)
T TIGR02718 278 --ILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELI 355 (390)
T ss_pred --HHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHH
Confidence 2222222111111 11 1 11122234444555788999999888898888887 78899999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHH
Q 046386 532 YGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAA 583 (609)
Q Consensus 532 ~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~ 583 (609)
++.+.|.+||..+ |+..|.+.+++++++.++
T Consensus 356 g~~~~G~l~~~~G---------------------~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 356 ASSIAGYLTDRFG---------------------YAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHc---------------------cHHHHHHHHHHHHHHHHH
Confidence 9999999999764 888998887776665544
No 80
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.59 E-value=1.5e-05 Score=89.35 Aligned_cols=121 Identities=21% Similarity=0.181 Sum_probs=81.8
Q ss_pred HHHHhCCChhhhhHHHHhhhcccch-hhhhhhhhhhhhHHHHH-HHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHh
Q 046386 65 LKSVLGVSQVQLNYLATASDLGKLF-GWLSGLALMYFPLWVVL-FMAAFMGFFGYGLQWLVISHVISLPYILVFFLCLLS 142 (609)
Q Consensus 65 lk~~L~~sq~qln~I~~a~~lG~~~-G~~sGll~~~~P~~~vl-lig~~~~~~GY~~~~l~~~~~~~~~~~~l~~~~~l~ 142 (609)
+++.+|+...|+|.+.++-.+|=.+ =+++|++.+.+|+...+ ..+.+-+.++....| .+ .++.++..=++.
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~---~~----s~~~~ialr~ll 144 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAA---VH----SFPGLIALRFLL 144 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH---Hh----hhHHHHHHHHHH
Confidence 8899999999999999999998744 35668888999853222 111111222222222 11 145555555666
Q ss_pred hcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHhhhCC
Q 046386 143 GLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGNAINP 192 (609)
Q Consensus 143 G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~~~f~ 192 (609)
|.-++...-+....-..+|. ++||+..|+.-+.-++++.+-+.|...+++
T Consensus 145 Gl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~ 195 (495)
T KOG2533|consen 145 GLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFK 195 (495)
T ss_pred HHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhh
Confidence 76555444455455666775 779999999999999999999999877654
No 81
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.58 E-value=0.00019 Score=80.70 Aligned_cols=120 Identities=15% Similarity=0.138 Sum_probs=78.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCC---------cchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhh
Q 046386 457 TGWLTIALLPTPVAFCLLATSGN---------AVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPI 527 (609)
Q Consensus 457 ~~~l~~~~~~~~~~~ll~~~~~~---------~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~ 527 (609)
+..+.+.+++++++++++..... ...+.+...+.|++.+...++..+++.+.=-.+.-|.-.|+.+++.++
T Consensus 350 ~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~ 429 (500)
T PRK09584 350 PHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAG 429 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 33455555666777666431111 225677789999999999999999999998888888899988888888
Q ss_pred HHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHH
Q 046386 528 GSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLL 587 (609)
Q Consensus 528 gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l 587 (609)
|+.+++.+.+.+.......++. ..+. -|...|...+.++++..++.+++
T Consensus 430 g~~~~g~~~~~~~~~~~~~~~~--------~~~~---~~~~~f~~~~~~~~~~a~~~~~~ 478 (500)
T PRK09584 430 AALIAGYVANLMAVPDNVTDPL--------MSLE---VYGRVFLQIGIATAVIAVLMLLT 478 (500)
T ss_pred HHHHHHHHHHHhccccccccch--------hhhh---hHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888887776554322111110 0011 27888888877665444333333
No 82
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.55 E-value=7e-05 Score=81.20 Aligned_cols=137 Identities=15% Similarity=0.138 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHhcCCccccccccHHHHHHhCCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q 046386 39 WMILVATIWIQAFTGTNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFFGY 117 (609)
Q Consensus 39 w~~lvas~~v~l~~Gt~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~GY 117 (609)
+..+..+.++...+...+.+. .+.+.+++|.++.++..+..+.-++. .++.+.|.++|.+.+.-+++++.+...++-
T Consensus 5 f~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~ 82 (393)
T PRK11195 5 FYAIMAAQFFSALADNALLFA--AIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGC 82 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHH
Confidence 445556666655544444333 35667899999999888888887777 446778999999977666666544433333
Q ss_pred HHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHH
Q 046386 118 GLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALA 186 (609)
Q Consensus 118 ~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i 186 (609)
...... . + + ...-++.|.+.+.++.++.....+.+| ++|+.+.|+.-....++..+-..+
T Consensus 83 ~~~~~~--~--~-~----~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~l 143 (393)
T PRK11195 83 LLMLFG--I--H-P----LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVL 143 (393)
T ss_pred HHHHHH--H--H-H----HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 221111 0 1 1 122356788888888888888899999 678999998776666555554444
No 83
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.52 E-value=0.00023 Score=77.29 Aligned_cols=372 Identities=19% Similarity=0.178 Sum_probs=213.4
Q ss_pred hHHHHHHHHHHHHhcCCccccccccHHHHHHhCCChhhhhHHHHhhhcccchh-hhhhhhhhhhhHHHHHHHHHHHHHHH
Q 046386 38 KWMILVATIWIQAFTGTNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKLFG-WLSGLALMYFPLWVVLFMAAFMGFFG 116 (609)
Q Consensus 38 Rw~~lvas~~v~l~~Gt~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~G-~~sGll~~~~P~~~vllig~~~~~~G 116 (609)
|.+.|..+.++.- -+=+.-.--=|++++.+|.|..+.-.+-++--+|..+| .+...+.+.+++.-+++....+..+|
T Consensus 14 ~l~aLa~~~F~ig--ttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~ 91 (394)
T COG2814 14 ALLALALAAFAIG--TTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVS 91 (394)
T ss_pred HHHHHHHHHHHHH--hHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHH
Confidence 4444444444322 12455566679999999999999777766666666433 33355556667776666644444444
Q ss_pred HHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHhhhCCCCh
Q 046386 117 YGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGNAINPSSH 195 (609)
Q Consensus 117 Y~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~~~f~~d~ 195 (609)
=.+..+ ++.|+.+.+.=++.|.+.+.+...+...++|-=| ++||.++|++.+..=++-.+-.++...+
T Consensus 92 n~l~al------Ap~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~i----- 160 (394)
T COG2814 92 NLLSAL------APSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFL----- 160 (394)
T ss_pred HHHHHH------hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHH-----
Confidence 333322 2346666666688888777666666677888887 6899999999887777766666654322
Q ss_pred hHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhhccCcchhhHHHHHHHHHH
Q 046386 196 ALYLLLNALIPLITSLAALIPILRQPSLDPLPPEGVKRDSFIFLILNIIAILTGVYLLLFGAHSSDLTVSRLLFGGALFL 275 (609)
Q Consensus 196 ~~fLllla~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~i~v~l~~yl~v~~~~~~~~~~~~~~~~g~~~l 275 (609)
+-.. .....|... ..+++-.+ +...
T Consensus 161 --------------g~~~-------------------GWR~~F~~i----a~l~ll~~------------------~~~~ 185 (394)
T COG2814 161 --------------GQLF-------------------GWRATFLAI----AVLALLAL------------------LLLW 185 (394)
T ss_pred --------------HHHh-------------------hHHHHHHHH----HHHHHHHH------------------HHHH
Confidence 0000 011112111 11111000 0011
Q ss_pred HHhhcccccccccccccccccccccccCCCCccccCCCchhHHHHHhhHhhhhccCCCCCCCCCcccccccccccccccc
Q 046386 276 LMFPLCIPGIVYARDWFKRTIHSSFRLDGSGFLLIDVDDLELHKELLMREAEASNNGKELDQPLLSTDDISMTYSLTRTK 355 (609)
Q Consensus 276 l~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (609)
..+| | ++. +++ +
T Consensus 186 ~~lP---~-----------------------------~~~------------------~~~---------------~--- 197 (394)
T COG2814 186 KLLP---P-----------------------------SEI------------------SGS---------------L--- 197 (394)
T ss_pred HhCC---C-----------------------------ccC------------------CCC---------------C---
Confidence 1111 1 000 000 0
Q ss_pred cccCCCcccccccccchhhcccCchHHHHhhhHHHHHHHHHHHhhccccceeecchhHHHHHhcC-Cc-ccchhhHHHHH
Q 046386 356 SFEKGGCCETIIGKDQLAMLGEEHSARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQSLGE-SS-RTTTLLTLYSS 433 (609)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~al~~-~~-~~~~~VSl~Si 433 (609)
+ .+..+..+.++++.-|..+++.+++.+..-+...-++++.++... +. ..+...-++.+
T Consensus 198 --~-----------------~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv 258 (394)
T COG2814 198 --P-----------------GPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGI 258 (394)
T ss_pred --C-----------------cchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHH
Confidence 0 001123668999999998888888776555666677888887643 22 34455666777
Q ss_pred hhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcC-CcchhHHHHHHHHhhhcchhhhHHHHHHHhhCC
Q 046386 434 FSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSG-NAVALQAGTSLIGLSSGFIFAAAVSITSELFGP 511 (609)
Q Consensus 434 ~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~-~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~ 511 (609)
...+|-++.| ++|+ +..|. +....+++.+..+.+...+ ++........+.|+..+...-....-.++ ...
T Consensus 259 ~~~~Gn~~gGrl~dr-----~~~~~--l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p 330 (394)
T COG2814 259 AGFIGNLLGGRLADR-----GPRRA--LIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAP 330 (394)
T ss_pred HHHHHHHHHhhhccc-----cchhH--HHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCC
Confidence 7888888888 4555 22222 2233334444444333232 23333333444566666666666666666 544
Q ss_pred CCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046386 512 NSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLLFLRT 591 (609)
Q Consensus 512 k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l~~r~ 591 (609)
++-..-=++...+.-+|--++..+.|.++|+.+ |..+..+.+.+.+++++++++...++
T Consensus 331 ~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g---------------------~~~~~~~~a~l~~~a~~~~~~~~~~~ 389 (394)
T COG2814 331 DAADLAGSLNVAAFNLGIALGAALGGLVLDALG---------------------YAATGWVGAALLLLALLLALLSARKD 389 (394)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---------------------hHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 666555555545555555555556669999843 89999999999888888887776655
Q ss_pred hh
Q 046386 592 RH 593 (609)
Q Consensus 592 r~ 593 (609)
||
T Consensus 390 ~~ 391 (394)
T COG2814 390 RR 391 (394)
T ss_pred cc
Confidence 54
No 84
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.49 E-value=2.2e-05 Score=82.76 Aligned_cols=154 Identities=12% Similarity=0.063 Sum_probs=100.2
Q ss_pred HHhhhHHHHHHHHHHHhhccccceeecchhHHHHH---hcCC-cccchhhHHHHHhhhhhhhhccchhhhhhhcccchhH
Q 046386 383 LLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQS---LGES-SRTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTG 458 (609)
Q Consensus 383 ~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~a---l~~~-~~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~ 458 (609)
..++++.+|+..+.+++-.|.-..+-+....-.+. .+.+ ...+..++.+...-.+||++.+ ++.+|++.+|..
T Consensus 135 ~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~---~l~~r~g~~~~l 211 (310)
T TIGR01272 135 SAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGS---AVMPMISQGRYL 211 (310)
T ss_pred hHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhCHHHHH
Confidence 35788899998888877655443333333333322 2332 2356678889989999999987 455555544432
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHH
Q 046386 459 WLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAI 538 (609)
Q Consensus 459 ~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~ 538 (609)
.+..++.++..++....+. ....+...++|++.+..|+..-+...+.++ ++-++.-+++ ....+|+.+.|.+.|.
T Consensus 212 --~~~~~l~~~~~~l~~~~~~-~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~-~~~~~asai~-~~~~~Gg~i~P~l~G~ 286 (310)
T TIGR01272 212 --AFNAFLAVLLSIGAALTHG-YVAMWFVLALGLFNSIMFPTIFSLALNALG-RHTSQGSGIL-CLAIVGGAIVPLLQGS 286 (310)
T ss_pred --HHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhhhhHHHH-HHHHhcchHHHHHHHH
Confidence 2222333333333332232 223346778999999999999999999999 6667777776 4445888999999999
Q ss_pred HhhccC
Q 046386 539 VYDSNV 544 (609)
Q Consensus 539 iyD~~~ 544 (609)
+-|..+
T Consensus 287 lad~~g 292 (310)
T TIGR01272 287 LADCLG 292 (310)
T ss_pred HHHhcc
Confidence 999764
No 85
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.46 E-value=2.1e-06 Score=91.06 Aligned_cols=172 Identities=17% Similarity=0.147 Sum_probs=121.9
Q ss_pred HHHHHHHHHHhhccccc-eeecchhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHH
Q 046386 389 DFWLYYIAYFCGGAIGL-VYSNNLGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALL 465 (609)
Q Consensus 389 ~Fwll~~~~~~g~g~Gl-m~I~n~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~ 465 (609)
.++.....+.+..+.+. ++......+.++++.+. ......++..+.+.++.+..| ++|+ +++ |+ ++....+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~----~g~-r~-~~~~~~~ 78 (385)
T TIGR00710 5 AFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDR----YGR-RP-VLLLGLF 78 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHh----cCC-hH-HHHHHHH
Confidence 34443344433333443 45555667777777643 345677778888888888888 4554 443 22 3444444
Q ss_pred HHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCC
Q 046386 466 PTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVS 545 (609)
Q Consensus 466 ~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~ 545 (609)
+..++.++....++...+.+...+.|++.|......++++.|.+..++-++.+|+......+|..+++.+.|.+.|..+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~- 157 (385)
T TIGR00710 79 IFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLS- 157 (385)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 5555555554445566678888999999999999999999999998999999999999999999999999998888653
Q ss_pred CCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHH
Q 046386 546 SGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLL 587 (609)
Q Consensus 546 ~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l 587 (609)
+|.+|.+.+..+++..++..+.
T Consensus 158 --------------------~~~~~~~~~~~~~~~~~~~~~~ 179 (385)
T TIGR00710 158 --------------------WHAIFAFLSLAGILLSALIFFI 179 (385)
T ss_pred --------------------HHHHHHHHHHHHHHHHHHHHHh
Confidence 8889988887777666655443
No 86
>PRK10504 putative transporter; Provisional
Probab=98.45 E-value=1.5e-06 Score=95.81 Aligned_cols=174 Identities=16% Similarity=0.194 Sum_probs=125.6
Q ss_pred HHHHHHHHHHhhccccceeecchhHHHHHhcCCcc-cchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHH
Q 046386 389 DFWLYYIAYFCGGAIGLVYSNNLGQIAQSLGESSR-TTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLP 466 (609)
Q Consensus 389 ~Fwll~~~~~~g~g~Glm~I~n~g~I~~al~~~~~-~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~ 466 (609)
.+|++++++++.....-++...+..+.++++.+.. ....++.+.+...++.+.+| ++|.+ +.+|. +....++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~----g~r~~--~~~~~~~ 84 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV----GVRNI--FFTAIVL 84 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----chHHH--HHHHHHH
Confidence 57888888877543333444567778888777433 33456777777778888777 56654 32233 2333334
Q ss_pred HHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCC
Q 046386 467 TPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSS 546 (609)
Q Consensus 467 ~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~ 546 (609)
.+++.++....++...+++.-.+.|++.|..++...+.+.|.+..++.++.+|+...+..+|..+++.+.|.+.|..+
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~g-- 162 (471)
T PRK10504 85 FTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYAS-- 162 (471)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcc--
Confidence 444444433344556678888999999999999999999999999999999999998889999999999999988543
Q ss_pred CCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHH
Q 046386 547 GIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLLFL 589 (609)
Q Consensus 547 ~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l~~ 589 (609)
+|..|.+....++++.++......
T Consensus 163 -------------------w~~~f~~~~~~~~l~~~~~~~~~~ 186 (471)
T PRK10504 163 -------------------WHWIFLINIPVGIIGAIATLMLMP 186 (471)
T ss_pred -------------------HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 899999988877777766665543
No 87
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.43 E-value=2.3e-06 Score=92.80 Aligned_cols=147 Identities=17% Similarity=0.167 Sum_probs=112.0
Q ss_pred eecchhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhH
Q 046386 407 YSNNLGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQ 484 (609)
Q Consensus 407 ~I~n~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~ 484 (609)
....+.++.++++.+. .....++...+...++++..| ++|. ++++ ..+....++.+++.++....++...++
T Consensus 39 ~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr----~grr--~~~~~~~~~~~~~~~~~~~~~~~~~l~ 112 (394)
T PRK10213 39 PVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQA----TDRR--YVVILFAVLLTLSCLLVSFANSFSLLL 112 (394)
T ss_pred HHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc----cCcH--HHHHHHHHHHHHHHHHHHHHChHHHHH
Confidence 3445667778777643 345678888888999999888 4554 4332 344444455555555554445567788
Q ss_pred HHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCccccccc
Q 046386 485 AGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRH 564 (609)
Q Consensus 485 ~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~ 564 (609)
+.-.+.|++.|..+...++++.|+|..|+.+...++...+..+|..+++.+.+.+.|..+
T Consensus 113 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~g-------------------- 172 (394)
T PRK10213 113 IGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIG-------------------- 172 (394)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--------------------
Confidence 888999999999999999999999999999999999999999999999999999987643
Q ss_pred ccHHHHHHHHHHHHHH
Q 046386 565 CYFLTFVLWGCVSVVG 580 (609)
Q Consensus 565 Cy~~tF~i~a~~~~~~ 580 (609)
+|..|.+.+.++++.
T Consensus 173 -w~~~f~~~~~l~~~~ 187 (394)
T PRK10213 173 -WRNVFNAAAVMGVLC 187 (394)
T ss_pred -HHHHHHHHHHHHHHH
Confidence 889998877655543
No 88
>PRK09669 putative symporter YagG; Provisional
Probab=98.42 E-value=5.4e-05 Score=83.27 Aligned_cols=159 Identities=15% Similarity=0.093 Sum_probs=87.9
Q ss_pred hHHHHhhhHHHHHHHHHHHhhccccceeecchhHHHHH--hcCCcccchhhHHHHHhhhhhhhhccchhhhhhhcccchh
Q 046386 380 SARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQS--LGESSRTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFART 457 (609)
Q Consensus 380 ~~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~a--l~~~~~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~ 457 (609)
..++.++++.||.+.+..++.. .+....+........ ++.+...........+...+|-++++ ++.+|++.+|.
T Consensus 221 ~~~~~~~n~~~~~l~~~~~~~~-~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~---~l~~r~gk~~~ 296 (444)
T PRK09669 221 DLKLLLGNSQWRIMFIFNVVLL-TAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSE---RLLGKFDRVRA 296 (444)
T ss_pred HHHHHhCCchHHHHHHHHHHHH-HHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhChHHH
Confidence 3467789999998776655431 122111111111000 01101111111222233445554444 55666553333
Q ss_pred HHHHHHHHHHHHHHH-HHH-hcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhh-------CCCCchhhhhHHHhhhhhH
Q 046386 458 GWLTIALLPTPVAFC-LLA-TSGNAVALQAGTSLIGLSSGFIFAAAVSITSELF-------GPNSVGVNHNILITNIPIG 528 (609)
Q Consensus 458 ~~l~~~~~~~~~~~l-l~~-~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~F-------G~k~fg~nyg~~~~a~~~g 528 (609)
..+ .++...+..+ ++. ..++...+++..++.|+++|+...+.+++++|.. |.+.-|..+++.....-+|
T Consensus 297 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg 374 (444)
T PRK09669 297 FKW--TIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLG 374 (444)
T ss_pred HHH--HHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHH
Confidence 222 2222222222 222 1223345677788999999999999999999987 7778888888887777777
Q ss_pred HHHHHHHHHHHhhccC
Q 046386 529 SLVYGFLAAIVYDSNV 544 (609)
Q Consensus 529 s~~~~~i~g~iyD~~~ 544 (609)
..+++.+.|.++|.-+
T Consensus 375 ~alg~~i~g~ll~~~G 390 (444)
T PRK09669 375 LAIGGAVVGWILAWVD 390 (444)
T ss_pred HHHHHHHHHHHHHHcC
Confidence 7777777777777643
No 89
>PRK09848 glucuronide transporter; Provisional
Probab=98.36 E-value=7.9e-05 Score=81.94 Aligned_cols=156 Identities=14% Similarity=0.139 Sum_probs=88.8
Q ss_pred HHHHhhhHHHHHHHHHHHhhccccceeecch-hHHHHH-hcCCcccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchh
Q 046386 381 ARLLVLRLDFWLYYIAYFCGGAIGLVYSNNL-GQIAQS-LGESSRTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFART 457 (609)
Q Consensus 381 ~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~-g~I~~a-l~~~~~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~ 457 (609)
.++.++++.|+.+.++.++.. .+....+.. ....+. ++. ......+..+.+.++.++.. +..++.+|++.+|.
T Consensus 221 ~~~l~~n~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~ 296 (448)
T PRK09848 221 LQTLKRNRPLFMLCIGALCVL-ISTFAVSASSLFYVRYVLND---TGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNT 296 (448)
T ss_pred HHHHhCCchHHHHHHHHHHHH-HHHHHHhhhheeeEeeecCC---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH
Confidence 467889999988776665532 222111111 111121 121 12233333444455555443 34466677654333
Q ss_pred HHHHHHHHHHHHHHHHHHhcC--CcchhHHHHHHHHhhhcchhhhHHHHHHHhh-------CCCCchhhhhHHHhhhhhH
Q 046386 458 GWLTIALLPTPVAFCLLATSG--NAVALQAGTSLIGLSSGFIFAAAVSITSELF-------GPNSVGVNHNILITNIPIG 528 (609)
Q Consensus 458 ~~l~~~~~~~~~~~ll~~~~~--~~~~l~~~s~liG~~yG~~f~~~P~i~se~F-------G~k~fg~nyg~~~~a~~~g 528 (609)
+.+..++..++.+++...+ +...+++...+.|++.|..++...++++|.= |.++-|..+|+.....-+|
T Consensus 297 --~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg 374 (448)
T PRK09848 297 --FLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCG 374 (448)
T ss_pred --HHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHH
Confidence 2333334444444443222 2233455567789999999988888887753 6677799899888877788
Q ss_pred HHHHHHHHHHHhhc
Q 046386 529 SLVYGFLAAIVYDS 542 (609)
Q Consensus 529 s~~~~~i~g~iyD~ 542 (609)
..+++.+.|.+.|.
T Consensus 375 ~aig~~i~g~~l~~ 388 (448)
T PRK09848 375 QAIGGSIPAFILGL 388 (448)
T ss_pred HHHHHHHHHHHHHH
Confidence 88887777777554
No 90
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.34 E-value=0.0017 Score=72.58 Aligned_cols=125 Identities=14% Similarity=-0.007 Sum_probs=85.3
Q ss_pred ccHHHHHH--hCCChhhhhHHHHhhhccc-chhhhhhhhhhh-hhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHH
Q 046386 61 YSSDLKSV--LGVSQVQLNYLATASDLGK-LFGWLSGLALMY-FPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYILVF 136 (609)
Q Consensus 61 YS~~lk~~--L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~-~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l~ 136 (609)
...-++++ +|+|+.|...+-.+-.++. ....+.|.++|. +.+.-+++++.+...+|+.+.... . .++.++
T Consensus 33 L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~--~----~~~~~~ 106 (475)
T TIGR00924 33 LAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMS--I----YPDLIF 106 (475)
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhc--c----cHhHHH
Confidence 33345666 9999999888877777665 445566999998 677777788877777888665332 1 134444
Q ss_pred HHHHHhhcchhhhhhHHHHHHHHhcCC----CCcchhhhhhhhhhhhHHHHHHHHhhhC
Q 046386 137 FLCLLSGLSITWFNTVCFVLCIQNFPA----NRALALSLTVSFNGVSAAIYALAGNAIN 191 (609)
Q Consensus 137 ~~~~l~G~g~~~~~taalvT~~kNFP~----~RG~avgl~k~~~GLSaaI~s~i~~~~f 191 (609)
+..++.|.|.+.+..+.-...++.||+ +|+.+.++.-....+++++-..+...+.
T Consensus 107 ~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~ 165 (475)
T TIGR00924 107 YGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIA 165 (475)
T ss_pred HHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHH
Confidence 445556766666555555666788984 3888888877777777777766665554
No 91
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.29 E-value=9e-06 Score=84.06 Aligned_cols=150 Identities=23% Similarity=0.330 Sum_probs=109.6
Q ss_pred hhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHH
Q 046386 411 LGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTS 488 (609)
Q Consensus 411 ~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~ 488 (609)
...+.++.+.+. ..+...++..+...++++..| ++|+. +++| ++.+...+..++.++....++...+++...
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~----g~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (352)
T cd06174 22 LPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF----GRRR--VLLLGLLLFALGSLLLAFASSLWLLLVGRF 95 (352)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh----CCch--hhHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 344455555432 244566777777888888888 56654 3222 444444555555555543455677888899
Q ss_pred HHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHH
Q 046386 489 LIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFL 568 (609)
Q Consensus 489 liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~ 568 (609)
+.|++.|..++..++++.|++..|+.++..++......+|..+++.+++.+.|... ++.
T Consensus 96 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---------------------~~~ 154 (352)
T cd06174 96 LLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLG---------------------WRW 154 (352)
T ss_pred HHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh---------------------HHH
Confidence 99999999999999999999999999999999999999999999999999988653 778
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 046386 569 TFVLWGCVSVVGLAASVLL 587 (609)
Q Consensus 569 tF~i~a~~~~~~~~~sl~l 587 (609)
.|.+.+...+++.++...+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~ 173 (352)
T cd06174 155 LFLILAILGLLLALLLLFL 173 (352)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 8888777766665555443
No 92
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.27 E-value=1.8e-06 Score=89.94 Aligned_cols=150 Identities=23% Similarity=0.309 Sum_probs=109.2
Q ss_pred HHHHHhcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHH
Q 046386 413 QIAQSLGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIG 491 (609)
Q Consensus 413 ~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG 491 (609)
.+.++++.+. ..+...++..+.+.++.+..| ++.||++ |++.+.+..++.+++.++....++...+.+...+.|
T Consensus 22 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g---~l~dr~g--~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 96 (352)
T PF07690_consen 22 YLAEELGLSPSQIGLLFSAFFLGSALFSPFAG---YLSDRFG--RRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLG 96 (352)
T ss_dssp HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHH---HHHHHS---HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHccCCCHHHHHHHHHHHHHHHHHHHHHHH---HHHHHcC--CeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccc
Confidence 4455555432 344566777777777777777 4444544 222455555555555333331244447888899999
Q ss_pred hhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHH
Q 046386 492 LSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFV 571 (609)
Q Consensus 492 ~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~ 571 (609)
++.|..+....+++.|++..|+.+...|+...+..+|..+++.+++.++|..+ +|.+|+
T Consensus 97 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~---------------------~~~~~~ 155 (352)
T PF07690_consen 97 IGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG---------------------WRWAFL 155 (352)
T ss_dssp HHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH---------------------HCCHHH
T ss_pred cccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccc---------------------cccccc
Confidence 99999999999999999999999999999999999999999999999986553 778899
Q ss_pred HHHHHHHHHHHHHHHHH
Q 046386 572 LWGCVSVVGLAASVLLF 588 (609)
Q Consensus 572 i~a~~~~~~~~~sl~l~ 588 (609)
+.+.+++++.++..++.
T Consensus 156 ~~~~~~~~~~il~~~~~ 172 (352)
T PF07690_consen 156 ISAILSLIAAILFILFL 172 (352)
T ss_dssp HHHHHHHHHHHHHHCCC
T ss_pred cccchhhhhhhhHhhhh
Confidence 99998888877544443
No 93
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.26 E-value=0.00031 Score=76.91 Aligned_cols=160 Identities=18% Similarity=0.195 Sum_probs=100.5
Q ss_pred HHHHhhhHHHHHHHHHHHhhccccceeecchhHH-HHHhcCCcccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhH
Q 046386 381 ARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQI-AQSLGESSRTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTG 458 (609)
Q Consensus 381 ~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I-~~al~~~~~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~ 458 (609)
.++++|++++..+++..++. +......|+-..+ .++++.... ...++.-..+.+.-+..- .++++.+|++..+.
T Consensus 200 ~~~llk~~~~~~Fll~~~l~-~~~~~~~~~f~~~yl~~~gg~~~--~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~l- 275 (400)
T PF03825_consen 200 ALKLLKNPRFLVFLLAAFLI-GISHAAYYTFFSIYLQELGGYSG--STIGILWALGVVAEIPFFFFSGRFLKRFGIKWL- 275 (400)
T ss_pred HHHHhcCccHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcccchh--hHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH-
Confidence 36799999998866655543 2334445555554 555553111 122222223445555553 67888888875533
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcchh-HHH----HHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHH-hhhhhHHHHH
Q 046386 459 WLTIALLPTPVAFCLLATSGNAVAL-QAG----TSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILI-TNIPIGSLVY 532 (609)
Q Consensus 459 ~l~~~~~~~~~~~ll~~~~~~~~~l-~~~----s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~-~a~~~gs~~~ 532 (609)
+.+..+..++=..+.+...++... +.. -.+=|++||..+......+.+..-.+.-++-.|+.. +..++|..++
T Consensus 276 -l~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG 354 (400)
T PF03825_consen 276 -LLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIG 354 (400)
T ss_pred -HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHH
Confidence 233332333333344433233222 222 234699999999999999999999888788888763 4678999999
Q ss_pred HHHHHHHhhccCC
Q 046386 533 GFLAAIVYDSNVS 545 (609)
Q Consensus 533 ~~i~g~iyD~~~~ 545 (609)
+.+.|.+||+.+.
T Consensus 355 ~~igG~l~~~~g~ 367 (400)
T PF03825_consen 355 SLIGGWLYDAFGA 367 (400)
T ss_pred HHHHHHHHHHhcc
Confidence 9999999999763
No 94
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.25 E-value=8.2e-06 Score=87.73 Aligned_cols=170 Identities=15% Similarity=0.203 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHhhccccceeecchhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHH
Q 046386 388 LDFWLYYIAYFCGGAIGLVYSNNLGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLP 466 (609)
Q Consensus 388 ~~Fwll~~~~~~g~g~Glm~I~n~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~ 466 (609)
+++|.+-+..++......++..-+..+.++++.+. .....++...+...+|.+..| ++.||+++ ...+.+..++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g---~l~dr~g~--r~~~~~~~~~ 77 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIA---LFSSRYSL--KHILLFLVAL 77 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHH---HHHccCcc--HHHHHHHHHH
Confidence 45666555444322122244445556677776643 345678888888889988888 34444442 2234444445
Q ss_pred HHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCC
Q 046386 467 TPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSS 546 (609)
Q Consensus 467 ~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~ 546 (609)
.+++.++....++...+++.-.+.|++.|..+...++++.|++..++.+...++...+..+|..+++.+.+.+.|..+
T Consensus 78 ~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-- 155 (382)
T PRK10091 78 CVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFS-- 155 (382)
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhcc--
Confidence 555655555456678888899999999999999999999999998889989999888888999998888888887543
Q ss_pred CCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHH
Q 046386 547 GIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAA 583 (609)
Q Consensus 547 ~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~ 583 (609)
+|.+|.+.+..+++..+.
T Consensus 156 -------------------wr~~f~~~~~~~~~~~~~ 173 (382)
T PRK10091 156 -------------------WRYTFLLIAVFNIAVLAS 173 (382)
T ss_pred -------------------HHHHHHHHHHHHHHHHHH
Confidence 899999887776655543
No 95
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.24 E-value=1e-05 Score=88.77 Aligned_cols=148 Identities=14% Similarity=0.129 Sum_probs=105.2
Q ss_pred hhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHH
Q 046386 411 LGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSL 489 (609)
Q Consensus 411 ~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~l 489 (609)
+.++.++++.+. .....+++..+...++++..| ++.||++.+| .+.+..++..++.++....++...+++.-.+
T Consensus 46 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G---~l~dr~g~r~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 120 (434)
T PRK11663 46 MPEMLADLGLSRSDIGLLATLFYITYGVSKFVSG---IVSDRSNARY--FMGIGLIATGIINILFGFSSSLWAFALLWVL 120 (434)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhh---HHHhhcCCch--hHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 445666666643 245567777777778887777 4455554333 3344444445555544434444556666677
Q ss_pred HHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHH
Q 046386 490 IGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLT 569 (609)
Q Consensus 490 iG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~t 569 (609)
.|++.|..+....+++.|+|..|+.|+..|+..++..+|+.+++.+.|.++|..+ +|..
T Consensus 121 ~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~g---------------------w~~~ 179 (434)
T PRK11663 121 NAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYG---------------------WRYG 179 (434)
T ss_pred HHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc---------------------HHHH
Confidence 8999999999999999999998999999999999999999999999999987543 8999
Q ss_pred HHHHHHHHHHHHHHH
Q 046386 570 FVLWGCVSVVGLAAS 584 (609)
Q Consensus 570 F~i~a~~~~~~~~~s 584 (609)
|.+.+..+++..++.
T Consensus 180 f~~~~i~~~~~~~~~ 194 (434)
T PRK11663 180 MMIAGIIAIVVGLFL 194 (434)
T ss_pred HHHHHHHHHHHHHHH
Confidence 988877665544333
No 96
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.23 E-value=4.4e-06 Score=87.31 Aligned_cols=137 Identities=8% Similarity=-0.029 Sum_probs=94.9
Q ss_pred chhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcC-----CcchhHHHHHHHHhhhcchhh
Q 046386 425 TTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLLATSG-----NAVALQAGTSLIGLSSGFIFA 499 (609)
Q Consensus 425 ~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~-----~~~~l~~~s~liG~~yG~~f~ 499 (609)
....++..+...++.+..| ++.||++++|. +.+..++..++.++..... +...+++...+.|++.|...+
T Consensus 37 g~~~~~~~~~~~i~~~~~G---~l~dr~g~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 111 (365)
T TIGR00900 37 SLAALAGMLPYVVLSPIAG---ALADRYDRKKV--MIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTP 111 (365)
T ss_pred HHHHHHHHHHHHHHHHhhh---HHHHhhchhHH--HHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555666666666 34444443333 3333333333333322122 456677888999999999999
Q ss_pred hHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHH
Q 046386 500 AAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVV 579 (609)
Q Consensus 500 ~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~ 579 (609)
...+++.|++..++.+..+|+...+..+|..+++.+.+.++|..+ +|.+|.+.+..+++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g---------------------~~~~~~~~~~~~~~ 170 (365)
T TIGR00900 112 AYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLG---------------------IKWAIWVDAVGFAI 170 (365)
T ss_pred HHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhh---------------------HHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988653 78888887776665
Q ss_pred HHHHHHHH
Q 046386 580 GLAASVLL 587 (609)
Q Consensus 580 ~~~~sl~l 587 (609)
+.++...+
T Consensus 171 ~~~~~~~~ 178 (365)
T TIGR00900 171 SALLIVSV 178 (365)
T ss_pred HHHHHHhc
Confidence 55444433
No 97
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.22 E-value=1.1e-05 Score=89.88 Aligned_cols=169 Identities=17% Similarity=0.190 Sum_probs=115.6
Q ss_pred HHHHHHHHHHhhccccceeecchhHHHHH---hcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHH
Q 046386 389 DFWLYYIAYFCGGAIGLVYSNNLGQIAQS---LGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIA 463 (609)
Q Consensus 389 ~Fwll~~~~~~g~g~Glm~I~n~g~I~~a---l~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~ 463 (609)
.+|.+++..++-...--.+..++....+. ++.+. .+...++.+++...++.+.+| ++|.. ++ |.+.+.+.
T Consensus 11 ~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~---~G--~~~~l~~~ 85 (475)
T TIGR00924 11 PLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRV---WG--TKKTMVLG 85 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhh---cc--hHHHHHHH
Confidence 35555555544221111223334444333 45533 356788999999999999998 56651 23 33344445
Q ss_pred HHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCC---chhhhhHHHhhhhhHHHHHHHHHHHHh
Q 046386 464 LLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNS---VGVNHNILITNIPIGSLVYGFLAAIVY 540 (609)
Q Consensus 464 ~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~---fg~nyg~~~~a~~~gs~~~~~i~g~iy 540 (609)
.++.+++++++...++...++++-.+.|++.|...+..+++++|+|..++ -++.+|+...+..+|+.+++.+.|.+.
T Consensus 86 ~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~ 165 (475)
T TIGR00924 86 GIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIA 165 (475)
T ss_pred HHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHH
Confidence 55666776666534444557777788999999999999999999998654 667888888888999999999999998
Q ss_pred hccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHH
Q 046386 541 DSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAA 583 (609)
Q Consensus 541 D~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~ 583 (609)
|.. .|+.+|.+.+..+++++++
T Consensus 166 ~~~---------------------g~~~~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 166 ENY---------------------GYHVGFNLAAVGMVIGLLT 187 (475)
T ss_pred Hhc---------------------ChHHHHHHHHHHHHHHHHH
Confidence 864 4999999887665555433
No 98
>PRK10054 putative transporter; Provisional
Probab=98.18 E-value=1.2e-05 Score=87.28 Aligned_cols=175 Identities=14% Similarity=0.015 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHhhccccceeec-chhHH-HHHhcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHH
Q 046386 388 LDFWLYYIAYFCGGAIGLVYSN-NLGQI-AQSLGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIA 463 (609)
Q Consensus 388 ~~Fwll~~~~~~g~g~Glm~I~-n~g~I-~~al~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~ 463 (609)
+++|.+.+..++.. .|...+. -+... .+.++.+. .....+++..+...++++..| ++|.+ +.+| .+.+.
T Consensus 7 ~~~~~l~~~~~~~~-~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~----g~k~--~~~~~ 79 (395)
T PRK10054 7 RSTSALLASSLLLT-IGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF----DKKR--YMLLA 79 (395)
T ss_pred chHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----Ccch--hHHHH
Confidence 35888777666643 3443333 23333 34456533 345566777777888888888 56654 3322 23333
Q ss_pred HHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhcc
Q 046386 464 LLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSN 543 (609)
Q Consensus 464 ~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~ 543 (609)
.+...++.+++...++...+.+.-.+.|.+++...++.++.++|.++.++.++.+|+......+|..+++.+.|.+++ .
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~ 158 (395)
T PRK10054 80 ITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-Q 158 (395)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h
Confidence 333444444444344444455556677888888888899999999999999999999988888999999989998874 2
Q ss_pred CCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046386 544 VSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLLFLRT 591 (609)
Q Consensus 544 ~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l~~r~ 591 (609)
.++.+|.+.+.++++++++..+...|+
T Consensus 159 ---------------------g~~~~f~~~~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 159 ---------------------SINLPFWLAAICSAFPLVFIQIWVQRS 185 (395)
T ss_pred ---------------------ccCcHHHHHHHHHHHHHHHHHHHHhcc
Confidence 277889888877777765554443333
No 99
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.16 E-value=1.6e-05 Score=84.52 Aligned_cols=155 Identities=15% Similarity=0.113 Sum_probs=114.7
Q ss_pred eeecchhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchh
Q 046386 406 VYSNNLGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVAL 483 (609)
Q Consensus 406 m~I~n~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l 483 (609)
|+.-.+.++.++++.+. +.....++..+...++++..| ++|+ +++ |+ ++.+..++..++.++....++...+
T Consensus 9 ~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~g~-~~-~~~~~~~~~~i~~~~~~~~~~~~~~ 82 (377)
T PRK11102 9 MYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADS----FGR-KP-VILGGTLVFALAAVACALAQTIDQL 82 (377)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhh----cCC-hH-HHHHHHHHHHHHHHHHHHHccHHHH
Confidence 34445667777776643 345567888888889999888 5554 432 22 4444444555555544434555677
Q ss_pred HHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccc
Q 046386 484 QAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGR 563 (609)
Q Consensus 484 ~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~ 563 (609)
++...+.|+++|.......+++.|++..++.++..|+......+|..+++.+.+.+.|..+
T Consensus 83 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~------------------- 143 (377)
T PRK11102 83 IYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFS------------------- 143 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-------------------
Confidence 8888999999999999999999999999999999999988889999999999999988653
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHH
Q 046386 564 HCYFLTFVLWGCVSVVGLAASVLL 587 (609)
Q Consensus 564 ~Cy~~tF~i~a~~~~~~~~~sl~l 587 (609)
+|..|.+.+.+++++.++..+.
T Consensus 144 --~~~~~~~~~~~~~~~~~~~~~~ 165 (377)
T PRK11102 144 --WHAIFWVLALAAILAAALVFFF 165 (377)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHh
Confidence 7889988888777766555444
No 100
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.14 E-value=3.1e-05 Score=83.65 Aligned_cols=170 Identities=11% Similarity=0.054 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHhhcc----ccceeecchhHHHHHhcCCcc-cchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHH
Q 046386 388 LDFWLYYIAYFCGGA----IGLVYSNNLGQIAQSLGESSR-TTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLT 461 (609)
Q Consensus 388 ~~Fwll~~~~~~g~g----~Glm~I~n~g~I~~al~~~~~-~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~ 461 (609)
.++|++.+.+.++.. ..-++.-.+.++.++++.+.. ....++.+.+...++.+..| ++|.+ +++| ++.
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~----g~r~--~l~ 82 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI----GRRP--VML 82 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----CChH--HHH
Confidence 566665555544332 222444456677777776432 34567778888888888888 56554 3322 333
Q ss_pred HHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhh
Q 046386 462 IALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYD 541 (609)
Q Consensus 462 ~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD 541 (609)
+..++..++.++....++...+++...+.|++.|....+.++.+.|.|..++-+...++......++..+++.+.+.+.|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~ 162 (406)
T PRK15402 83 AGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIH 162 (406)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444345556678888999999999999999999999987776666677766666777888888888877
Q ss_pred ccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHH
Q 046386 542 SNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAAS 584 (609)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~s 584 (609)
.. .+|.+|.+.++.++++.+..
T Consensus 163 ~~---------------------~w~~~~~~~~~~~~~~~~~~ 184 (406)
T PRK15402 163 VL---------------------PWRGMFVLFAALAALSFFGL 184 (406)
T ss_pred cc---------------------CccHHHHHHHHHHHHHHHHH
Confidence 54 38889988887777665543
No 101
>PRK03699 putative transporter; Provisional
Probab=98.13 E-value=3.1e-05 Score=83.58 Aligned_cols=169 Identities=15% Similarity=0.240 Sum_probs=112.9
Q ss_pred HHHHHHHHHHhhccccceeecchhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHH
Q 046386 389 DFWLYYIAYFCGGAIGLVYSNNLGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLP 466 (609)
Q Consensus 389 ~Fwll~~~~~~g~g~Glm~I~n~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~ 466 (609)
-+|..++.+++..+.-.++=..+.++.++++.+. ......++..+...+|.+.+| ++|++ +++| .+....++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~----g~r~--~~~~~~~~ 81 (394)
T PRK03699 8 LTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII----PLKR--QLIFGFAL 81 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hHHH--HHHHHHHH
Confidence 4566555555543322222233566777776643 244566677777778888777 45554 3222 33344444
Q ss_pred HHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCC
Q 046386 467 TPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSS 546 (609)
Q Consensus 467 ~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~ 546 (609)
..++.++....++...+++.-.+.|++.|..++...+++.|.|..|+-+...++......+|+.+.+.+.+.+.+.+.
T Consensus 82 ~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-- 159 (394)
T PRK03699 82 MILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSI-- 159 (394)
T ss_pred HHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--
Confidence 445555444345556677778899999999999999999999988888888888878888888888888888776432
Q ss_pred CCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHH
Q 046386 547 GIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAA 583 (609)
Q Consensus 547 ~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~ 583 (609)
-+|..|.+.+.++++..++
T Consensus 160 ------------------gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 160 ------------------EWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred ------------------cHHHHHHHHHHHHHHHHHH
Confidence 3889998877766555443
No 102
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.13 E-value=2.9e-05 Score=84.81 Aligned_cols=153 Identities=11% Similarity=0.096 Sum_probs=112.3
Q ss_pred eeecchhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchh
Q 046386 406 VYSNNLGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVAL 483 (609)
Q Consensus 406 m~I~n~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l 483 (609)
++.-.+.+|.++++.+. .....+|++.+...+|.+..| ++|.+ +++| .+....++..++.++....++...+
T Consensus 34 ~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~----Grr~--~l~~~~~~~~~~~~~~~~a~~~~~l 107 (413)
T PRK15403 34 LIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI----GRRP--VLITGALIFTLACAATLFTTSMTQF 107 (413)
T ss_pred hhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc----CchH--HHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 55556667888887643 355688999999999999998 56654 3222 3344444455555554444556678
Q ss_pred HHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccc
Q 046386 484 QAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGR 563 (609)
Q Consensus 484 ~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~ 563 (609)
++.-.+.|++.|.......+++.|.|..++-+...++...+..+|..+++.+.+.+.|..
T Consensus 108 ~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~-------------------- 167 (413)
T PRK15403 108 LIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV-------------------- 167 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------------
Confidence 888899999888777777889999999888889999988888889888888888887643
Q ss_pred cccHHHHHHHHHHHHHHHHHHH
Q 046386 564 HCYFLTFVLWGCVSVVGLAASV 585 (609)
Q Consensus 564 ~Cy~~tF~i~a~~~~~~~~~sl 585 (609)
-+|..|.+.++..+++++..+
T Consensus 168 -gw~~~f~~~~~~~~i~~~~~~ 188 (413)
T PRK15403 168 -HWKVLFAIIAVMGLIAFVGLL 188 (413)
T ss_pred -CHHHHHHHHHHHHHHHHHHHH
Confidence 289999998887776655443
No 103
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.12 E-value=1.7e-05 Score=70.59 Aligned_cols=132 Identities=16% Similarity=0.249 Sum_probs=94.0
Q ss_pred HHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHh
Q 046386 429 TLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSEL 508 (609)
Q Consensus 429 Sl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~ 508 (609)
+..++.+.++++..| ++.||++.+|. +.....+..++.++....++...+.+...+.|++.|.......+.+.|.
T Consensus 5 ~~~~~~~~~~~~~~g---~~~d~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 79 (141)
T TIGR00880 5 AGYALGQLIYSPLSG---LLTDRFGRKPV--LLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADI 79 (141)
T ss_pred EeehhHHHHHHhhHH---HHHhhcchhHH--HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 344555566666665 45555543333 3333334444444443344556677778999999999999999999999
Q ss_pred hCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHH
Q 046386 509 FGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVL 586 (609)
Q Consensus 509 FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~ 586 (609)
+..++.++..++..+...+|..+++.+.+.+.|.. .++..|.+.+..++++.+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~ 136 (141)
T TIGR00880 80 YPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL---------------------GWRAPFLFLAILALAAFILLAF 136 (141)
T ss_pred CChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc---------------------chHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999988654 3788888887776666555543
No 104
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.12 E-value=0.0088 Score=67.23 Aligned_cols=117 Identities=16% Similarity=0.024 Sum_probs=75.5
Q ss_pred HHHHHhCCChhhhhHHHHhhhc-ccchhhhhhhhhhh-hhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHH
Q 046386 64 DLKSVLGVSQVQLNYLATASDL-GKLFGWLSGLALMY-FPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYILVFFLCLL 141 (609)
Q Consensus 64 ~lk~~L~~sq~qln~I~~a~~l-G~~~G~~sGll~~~-~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l~~~~~l 141 (609)
-+++.+|+++++.+.+..+-.+ ......+.|.+.|. +.+.-+.++|.+...+|+.+..+... .+ ..+.....+
T Consensus 40 yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~----~~-~ll~~~~~l 114 (489)
T PRK10207 40 FFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLL----KP-DLIFIALGT 114 (489)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhcc----ch-hHHHHHHHH
Confidence 3467899999998776655543 32344567999997 88888888888888888877654321 11 223334455
Q ss_pred hhcchhhhhhHHHHHHHHhcCCC---CcchhhhhhhhhhhhHHHHHH
Q 046386 142 SGLSITWFNTVCFVLCIQNFPAN---RALALSLTVSFNGVSAAIYAL 185 (609)
Q Consensus 142 ~G~g~~~~~taalvT~~kNFP~~---RG~avgl~k~~~GLSaaI~s~ 185 (609)
.|.|.+.+.........+.||++ |+.+.++.-....+++++...
T Consensus 115 ~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~ 161 (489)
T PRK10207 115 IAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLS 161 (489)
T ss_pred HHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHH
Confidence 66766666555556778999844 366666655556665554433
No 105
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.11 E-value=3.3e-05 Score=90.66 Aligned_cols=187 Identities=13% Similarity=-0.010 Sum_probs=113.7
Q ss_pred HhhhHHHHHHHHHHHhhcc-ccc--eeecch-hHHHHHhcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchh
Q 046386 384 LVLRLDFWLYYIAYFCGGA-IGL--VYSNNL-GQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFART 457 (609)
Q Consensus 384 ~l~~~~Fwll~~~~~~g~g-~Gl--m~I~n~-g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~ 457 (609)
.-.++..|.+++++.++.. .|. ..++.+ .++.+.++.+. ..+...+++.+...+|.+++| ++|.+ + |.
T Consensus 159 ~~~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~----G--RR 232 (742)
T TIGR01299 159 CGHGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL----G--RK 232 (742)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----C--cH
Confidence 3345667766555443221 121 222222 22334445432 234567777777888888887 45554 3 33
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHH
Q 046386 458 GWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAA 537 (609)
Q Consensus 458 ~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g 537 (609)
..+.+.+++..++.++.+..++...+.+.-++.|++.|+.+.+.+++++|++..++-|...+++.+.+.+|..+.+.++.
T Consensus 233 ~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~ 312 (742)
T TIGR01299 233 QCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAW 312 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444434456678888999999999999999999999999999999999998889999888877665
Q ss_pred HHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHH
Q 046386 538 IVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAAS 584 (609)
Q Consensus 538 ~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~s 584 (609)
.+-...+-+...+ ..+....+|..|.+.+..+++++++.
T Consensus 313 ~il~~~G~~~~~g--------~~~~~~gWR~l~~i~~lp~ll~ll~~ 351 (742)
T TIGR01299 313 AIIPHYGWSFQMG--------SAYQFHSWRVFVIVCAFPCVFAIGAL 351 (742)
T ss_pred HHHHhccchhccc--------cccccccHHHHHHHHHHHHHHHHHHH
Confidence 5543322110000 01122357888877666655554443
No 106
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.11 E-value=1.1e-05 Score=84.69 Aligned_cols=147 Identities=17% Similarity=0.192 Sum_probs=108.5
Q ss_pred HHHHhcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHH
Q 046386 414 IAQSLGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIG 491 (609)
Q Consensus 414 I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG 491 (609)
+.++++.+. ......++..+.+.++.+..| ++|++ +++|. +.+..++.+++.++.+..++...+++.-.+.|
T Consensus 20 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~----g~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 93 (399)
T TIGR00893 20 LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF----GARKT--LAVFIVIWGVFTGLQAFAGAYVSLYILRVLLG 93 (399)
T ss_pred HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc----Cccee--eHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 445555532 345678888888899998888 45554 43332 23333344444444443455677888889999
Q ss_pred hhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHH
Q 046386 492 LSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFV 571 (609)
Q Consensus 492 ~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~ 571 (609)
++.|..+...+++++|++..|+-++..|+......+|..+++.+.+.+.|..+ +|..|.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~---------------------~~~~~~ 152 (399)
T TIGR00893 94 AAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFS---------------------WQWAFI 152 (399)
T ss_pred HHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCC---------------------chHHHH
Confidence 99999999999999999999999999999999999999999999998887543 889998
Q ss_pred HHHHHHHHHHHHHHHH
Q 046386 572 LWGCVSVVGLAASVLL 587 (609)
Q Consensus 572 i~a~~~~~~~~~sl~l 587 (609)
+.+..+++..++....
T Consensus 153 ~~~~~~~~~~~~~~~~ 168 (399)
T TIGR00893 153 IEGVLGIIWGVLWLKF 168 (399)
T ss_pred HHHHHHHHHHHHhhhe
Confidence 8887776665555443
No 107
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.07 E-value=6.5e-05 Score=80.64 Aligned_cols=173 Identities=16% Similarity=0.156 Sum_probs=114.7
Q ss_pred hHHHHHHHHHHHhhccccc-eeecchhHHHHHhcCCccc------chhhHHHHHhhhhhhhhcc-chhhhhhhcccchhH
Q 046386 387 RLDFWLYYIAYFCGGAIGL-VYSNNLGQIAQSLGESSRT------TTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTG 458 (609)
Q Consensus 387 ~~~Fwll~~~~~~g~g~Gl-m~I~n~g~I~~al~~~~~~------~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~ 458 (609)
+++++.+|+..++.. .+. ++.--+..+.++++.+..+ ....++..+...++.+..| ++|.. +++|
T Consensus 13 ~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~----g~r~-- 85 (408)
T PRK09874 13 KRNLTVAWLGCFLTG-AAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK----GRKI-- 85 (408)
T ss_pred HHHHHHHHHHHHHHH-HHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh----CcHH--
Confidence 346777777665532 222 3333456666776653322 3455666677788888888 56654 3222
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHH
Q 046386 459 WLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAI 538 (609)
Q Consensus 459 ~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~ 538 (609)
.+....++..++.++....++...+++...+.|++.| .+....+.+.|.+..++.+...++..++..+|..+++.+.|.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 164 (408)
T PRK09874 86 MLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGL 164 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444554444434445667777888888754 567777888999998888999999988888899899999999
Q ss_pred HhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 046386 539 VYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLLF 588 (609)
Q Consensus 539 iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l~ 588 (609)
+.|..+ ++.+|.+.+.+++++.++.+++.
T Consensus 165 l~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~ 193 (408)
T PRK09874 165 LADSYG---------------------LRPVFFITASVLFLCFLVTLFCI 193 (408)
T ss_pred HHHHhC---------------------HHHHHHHHHHHHHHHHHHHHHHh
Confidence 987543 88999988887776666555443
No 108
>PRK11043 putative transporter; Provisional
Probab=98.06 E-value=3.4e-05 Score=83.15 Aligned_cols=155 Identities=12% Similarity=0.059 Sum_probs=108.8
Q ss_pred eeecchhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchh
Q 046386 406 VYSNNLGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVAL 483 (609)
Q Consensus 406 m~I~n~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l 483 (609)
++.-...++.++++.+. ......++..+...++.+.+| ++|++ +.+| .+....++..++.++....++...+
T Consensus 24 ~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~----g~r~--~~~~~~~~~~~~~~~~~~~~~~~~l 97 (401)
T PRK11043 24 MYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY----GRKP--VLLAGLSLFALGSLGMLWVESAAQL 97 (401)
T ss_pred HHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc----CCcH--HHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 44445666777776633 345677778877888888888 55554 3222 3333333444444444434445567
Q ss_pred HHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccc
Q 046386 484 QAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGR 563 (609)
Q Consensus 484 ~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~ 563 (609)
.+.-.+.|++.|.......+++.|.|..++-+..++.......++..+++.+.|.+.|..+
T Consensus 98 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g------------------- 158 (401)
T PRK11043 98 LVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFG------------------- 158 (401)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------------------
Confidence 7777888999988888889999999998888888888877778888888999999988653
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHH
Q 046386 564 HCYFLTFVLWGCVSVVGLAASVLL 587 (609)
Q Consensus 564 ~Cy~~tF~i~a~~~~~~~~~sl~l 587 (609)
+|.+|.+.+.++++..++.+++
T Consensus 159 --~~~~~~~~~~~~~~~~~~~~~~ 180 (401)
T PRK11043 159 --WQAIFATLFAITLLLILPTLRL 180 (401)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHc
Confidence 8889988877777666554443
No 109
>PRK03545 putative arabinose transporter; Provisional
Probab=98.05 E-value=3.8e-05 Score=82.66 Aligned_cols=150 Identities=16% Similarity=0.111 Sum_probs=111.7
Q ss_pred hhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHH
Q 046386 411 LGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSL 489 (609)
Q Consensus 411 ~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~l 489 (609)
..++.++++.+. +....++++.+...++.+..| .+.||++++ +.+....++.+++.++....++...+++.-.+
T Consensus 32 ~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g---~l~dr~g~r--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~ 106 (390)
T PRK03545 32 LSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLM---LLTSNVERR--KLLIGLFVLFIASHVLSALAWNFTVLLISRIG 106 (390)
T ss_pred hHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHH---HHHcCCChH--HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 577788877643 345677788878888888877 444455433 34444444555555554445566777788889
Q ss_pred HHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHH
Q 046386 490 IGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLT 569 (609)
Q Consensus 490 iG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~t 569 (609)
.|++.|..++...+++.|++-.++-+...|+..++..+|..+++.+.+.+.+..+ +|.+
T Consensus 107 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~g---------------------w~~~ 165 (390)
T PRK03545 107 IAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLG---------------------WRTT 165 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhc---------------------HHHH
Confidence 9999999999999999999999999999999999999999999988888877543 8899
Q ss_pred HHHHHHHHHHHHHHHHH
Q 046386 570 FVLWGCVSVVGLAASVL 586 (609)
Q Consensus 570 F~i~a~~~~~~~~~sl~ 586 (609)
|.+.+.++++..++...
T Consensus 166 f~~~~~~~~l~~~~~~~ 182 (390)
T PRK03545 166 FLAIGGGALITLLLLIK 182 (390)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99988877666554443
No 110
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.04 E-value=6.1e-05 Score=80.96 Aligned_cols=167 Identities=11% Similarity=0.120 Sum_probs=113.5
Q ss_pred HHHHHHHHhhccccceeecchhHHHHHhcCCcc-cchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHH
Q 046386 391 WLYYIAYFCGGAIGLVYSNNLGQIAQSLGESSR-TTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTP 468 (609)
Q Consensus 391 wll~~~~~~g~g~Glm~I~n~g~I~~al~~~~~-~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~ 468 (609)
|++.+...++....-+++..+.++.++++.+.. .....++..+...++.+..| ++|+ ++++| .+.+..++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr----~grr~--~~~~~~~~~~ 84 (394)
T PRK11652 11 FMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDR----VGRRP--VILVGMSIFI 84 (394)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHh----cCChH--HHHHHHHHHH
Confidence 334444444332222445556778888877433 45567788888888888888 5664 44322 3333444444
Q ss_pred HHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCC
Q 046386 469 VAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGI 548 (609)
Q Consensus 469 ~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~ 548 (609)
++.++....++...+++...+.|++.|........++.|.+..++.+...++..++..++..+++.+.|.+.|..+
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g---- 160 (394)
T PRK11652 85 LGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFG---- 160 (394)
T ss_pred HHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC----
Confidence 5444444345556677888899999998888888899999988889988888888888888888888888877542
Q ss_pred CcCcccCCCcccccccccHHHHHHHHHHHHHHHHHH
Q 046386 549 GIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAAS 584 (609)
Q Consensus 549 ~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~s 584 (609)
+|.+|.+.+..+++..++.
T Consensus 161 -----------------~~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK11652 161 -----------------WRACYLFLLLLGAGVTFSM 179 (394)
T ss_pred -----------------hHHHHHHHHHHHHHHHHHH
Confidence 8899988776655444433
No 111
>TIGR00895 2A0115 benzoate transport.
Probab=98.04 E-value=2.7e-05 Score=82.43 Aligned_cols=148 Identities=22% Similarity=0.175 Sum_probs=102.9
Q ss_pred hhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHH
Q 046386 411 LGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTS 488 (609)
Q Consensus 411 ~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~ 488 (609)
+..+.+.++.+. ......++..+...++.+..| ++|.+ + |..++.+..++..++.++....++...+.+...
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~----g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (398)
T TIGR00895 40 APAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI----G--RKRVLLWSILLFSVFTLLCALATNVTQLLILRF 113 (398)
T ss_pred HHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh----h--hHHHHHHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 344555555532 234455666677777777777 45554 3 222344444445555554443455566778889
Q ss_pred HHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHH
Q 046386 489 LIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFL 568 (609)
Q Consensus 489 liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~ 568 (609)
+.|++.|..+...+++++|.+..++-++..|+...+..+|..+++.+.|.+.|..+ ++.
T Consensus 114 ~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g---------------------~~~ 172 (398)
T TIGR00895 114 LAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFG---------------------WRS 172 (398)
T ss_pred HHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhccc---------------------cee
Confidence 99999999999999999999999999999999999999999999999998887543 667
Q ss_pred HHHHHHHHHHHHHHHHH
Q 046386 569 TFVLWGCVSVVGLAASV 585 (609)
Q Consensus 569 tF~i~a~~~~~~~~~sl 585 (609)
.|.+.+.++++..++..
T Consensus 173 ~~~~~~~~~~~~~~~~~ 189 (398)
T TIGR00895 173 LFYVGGIAPLLLLLLLM 189 (398)
T ss_pred ehhhhhhHHHHHHHHHH
Confidence 77777655555444433
No 112
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.04 E-value=4.4e-05 Score=84.50 Aligned_cols=148 Identities=13% Similarity=0.178 Sum_probs=101.0
Q ss_pred hhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHH-H
Q 046386 411 LGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGT-S 488 (609)
Q Consensus 411 ~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s-~ 488 (609)
..++.+.++.+. ......+++.+...++..+.| ++.+|++.+| .+....++..++.++.+..++...+++.. .
T Consensus 42 ~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G---~l~dr~g~r~--~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 116 (455)
T TIGR00892 42 FKELQQIFQATYSETAWISSIMLAVLYAGGPISS---ILVNRFGCRP--VVIAGGLLASLGMILASFSSNVIELYLTAGF 116 (455)
T ss_pred HHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHH---HHHHHcCchH--HHHhhHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 445566666532 344566666666777777777 3344443322 33444444444444443334444455443 6
Q ss_pred HHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHH
Q 046386 489 LIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFL 568 (609)
Q Consensus 489 liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~ 568 (609)
+.|++.|..+....+++.++|. |+-++..|+..++..+|..+++.+.|.+.|..+ +|.
T Consensus 117 l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g---------------------wr~ 174 (455)
T TIGR00892 117 ITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFG---------------------WRG 174 (455)
T ss_pred HHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhC---------------------hHH
Confidence 7799999877777788899996 888999999999999999999999999998653 999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 046386 569 TFVLWGCVSVVGLAASV 585 (609)
Q Consensus 569 tF~i~a~~~~~~~~~sl 585 (609)
+|++.+++++++.++.+
T Consensus 175 ~f~~~~~~~~~~~v~~~ 191 (455)
T TIGR00892 175 SFLILGGLLLHCCVCGA 191 (455)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999888776655433
No 113
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.03 E-value=4.2e-05 Score=82.20 Aligned_cols=156 Identities=15% Similarity=0.122 Sum_probs=111.9
Q ss_pred eeecchhHHHHHhcCCcc-cchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchh
Q 046386 406 VYSNNLGQIAQSLGESSR-TTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVAL 483 (609)
Q Consensus 406 m~I~n~g~I~~al~~~~~-~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l 483 (609)
++...+.++.++++.+.. .....+++.+...++.+..| ++|.+ ++ |+ ++.+..++..++.++....++...+
T Consensus 21 ~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~----g~-r~-~l~~~~~~~~i~~~~~~~~~~~~~~ 94 (392)
T PRK10473 21 MYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS----GR-KP-VAIPGAALFIIASLLCSLAETSSLF 94 (392)
T ss_pred HHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh----CC-hH-HHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 445567778888876433 34566777777778888888 56654 32 22 4444444555555554434455667
Q ss_pred HHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccc
Q 046386 484 QAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGR 563 (609)
Q Consensus 484 ~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~ 563 (609)
++.-.+.|++.|..+....+++.|.+..|+-++..++......+|..+++.+.+.+.|..
T Consensus 95 ~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~-------------------- 154 (392)
T PRK10473 95 LAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF-------------------- 154 (392)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc--------------------
Confidence 777888999999999999999999999999999999888877788888888888877643
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHH
Q 046386 564 HCYFLTFVLWGCVSVVGLAASVLLF 588 (609)
Q Consensus 564 ~Cy~~tF~i~a~~~~~~~~~sl~l~ 588 (609)
.++..|.+.+.++++..++.++..
T Consensus 155 -g~~~~~~~~~~~~~i~~~~~~~~~ 178 (392)
T PRK10473 155 -PWQSLFYTMAAMGILVLLLSLFIL 178 (392)
T ss_pred -ChHHHHHHHHHHHHHHHHHHHHHc
Confidence 389999998887777766655443
No 114
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.00 E-value=5.2e-05 Score=82.77 Aligned_cols=144 Identities=14% Similarity=0.091 Sum_probs=102.5
Q ss_pred cchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHH
Q 046386 424 TTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVS 503 (609)
Q Consensus 424 ~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~ 503 (609)
.....+++.+...++.+..| ++.||++.+| .+...+++..++.++.+..++...+++.-.+.|++.|+.+....+
T Consensus 45 ~g~~~s~~~~~~~~~~~~~g---~l~dr~G~r~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 119 (412)
T TIGR02332 45 FGLAATLFYAAYVICGIPSN---IMLAIIGARR--WIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILL 119 (412)
T ss_pred HHHHHHHHHHHHHHHHhhHH---HHHHHhChHH--HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 34566777777777777777 4444444332 344444455555555544556677888899999999999998889
Q ss_pred HHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHH
Q 046386 504 ITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAA 583 (609)
Q Consensus 504 i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~ 583 (609)
+++|+|-.|+-|+..|+...+.++|..+++.+.+.+.+.+.- .+..-.|.+|.+.+..+++..++
T Consensus 120 ~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~---------------~~~~gwr~~f~~~~~~~l~~~~~ 184 (412)
T TIGR02332 120 YLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGL---------------MALKGWQWLFLLEGFPSVILGVM 184 (412)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---------------CCccchhHHHHHHHHHHHHHHHH
Confidence 999999988999999999999999999999999988764320 01114899999987776655444
Q ss_pred HHHH
Q 046386 584 SVLL 587 (609)
Q Consensus 584 sl~l 587 (609)
..+.
T Consensus 185 ~~~~ 188 (412)
T TIGR02332 185 TWFW 188 (412)
T ss_pred Hhhc
Confidence 4333
No 115
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.00 E-value=2.7e-05 Score=85.66 Aligned_cols=152 Identities=13% Similarity=0.157 Sum_probs=112.4
Q ss_pred chhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHH
Q 046386 410 NLGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGT 487 (609)
Q Consensus 410 n~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s 487 (609)
....+.++++.+. ......+.+.+.+.++.+..| ++|++ +++| .+.+..++..++.++....++...+.+.-
T Consensus 24 ~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----g~r~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 97 (485)
T TIGR00711 24 AIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF----GTRR--LFLISTFAFTLGSLLCGVAPNLELMIIFR 97 (485)
T ss_pred HHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh----CcHH--HHHHHHHHHHHHHHHHhCcCCHHHHHHHH
Confidence 3456666676643 345677888888899988888 45554 4322 33344445555555555455667788889
Q ss_pred HHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccH
Q 046386 488 SLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYF 567 (609)
Q Consensus 488 ~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~ 567 (609)
.+.|++.|.......+++.|++..++-+...|+..+...+|..+++.+.|.+.|.. .+|
T Consensus 98 ~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~---------------------~w~ 156 (485)
T TIGR00711 98 VIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY---------------------HWR 156 (485)
T ss_pred HHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc---------------------Cce
Confidence 99999999999999999999999999999999998999999999999999988754 277
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 046386 568 LTFVLWGCVSVVGLAASVLLF 588 (609)
Q Consensus 568 ~tF~i~a~~~~~~~~~sl~l~ 588 (609)
..|.+.+.++++..++..+..
T Consensus 157 ~~f~~~~~~~~~~~~~~~~~~ 177 (485)
T TIGR00711 157 WIFLINVPIGIIVVVVAFFIL 177 (485)
T ss_pred ehhhhhhHHHHHHHHHHHHHc
Confidence 888887777766666555443
No 116
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=97.99 E-value=0.00011 Score=78.21 Aligned_cols=144 Identities=11% Similarity=0.137 Sum_probs=99.4
Q ss_pred hHHHHHhcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHH
Q 046386 412 GQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLI 490 (609)
Q Consensus 412 g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~li 490 (609)
.++.++++.+. ......++..+...++-+..| ++.||++++|. +.+..++..++.++....++...+++.-.+.
T Consensus 36 ~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G---~l~Dr~g~r~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 110 (405)
T TIGR00891 36 AEVAGEFGLTTVDAASLISAALISRWFGALMFG---LWGDRYGRRLP--MVTSIVLFSAGTLACGFAPGYITMFIARLVI 110 (405)
T ss_pred HHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHH---HHHHHhccHHH--HHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 45555566532 234556666666666666666 44445543333 3333444455555444345566778888999
Q ss_pred HhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHH
Q 046386 491 GLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTF 570 (609)
Q Consensus 491 G~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF 570 (609)
|++.|..+...++.+.|++..++-+...|+..++..+|..+++.+.+.+.+..+. .+|..|
T Consensus 111 G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~-------------------~w~~~f 171 (405)
T TIGR00891 111 GIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGD-------------------GWRALF 171 (405)
T ss_pred HhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-------------------cHHHHH
Confidence 9999999999999999999999999999999999999999999888887764320 378888
Q ss_pred HHHHHHHHH
Q 046386 571 VLWGCVSVV 579 (609)
Q Consensus 571 ~i~a~~~~~ 579 (609)
.+.+...++
T Consensus 172 ~~~~~~~~~ 180 (405)
T TIGR00891 172 FISILPIIF 180 (405)
T ss_pred HHHHHHHHH
Confidence 765444433
No 117
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.99 E-value=0.00034 Score=76.57 Aligned_cols=156 Identities=18% Similarity=0.227 Sum_probs=99.6
Q ss_pred HHHHhhhHHHHHHHHHHHhhccccceeecchhH-HHHH-hcCCcccchhhHHHHHhhhhhhhhccchhhhhhhcccchhH
Q 046386 381 ARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQ-IAQS-LGESSRTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTG 458 (609)
Q Consensus 381 ~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~-I~~a-l~~~~~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~ 458 (609)
.++.+++++|+.++++.++.. .+....++..+ ..+. ++.+...+.+..+..+.+.++-.+++ ++.||++.+|.+
T Consensus 218 ~~~~~~nr~~~~l~~~~~~~~-~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~---~l~~r~gk~~~~ 293 (428)
T PF13347_consen 218 LRSLFRNRPFRILLLAFFLQW-LAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWG---RLSKRFGKKKVY 293 (428)
T ss_pred hhhhcccchHHHHHHHHHHHH-hhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHH---HHHHHccceeeh
Confidence 467888999998888877642 34443333332 3333 33332344455555556666666665 666666655543
Q ss_pred HHHHHHHHHHHHHHHHHhc--CCcchhHHHHHHHHhhhcchhhhHHHHHHHhh-------CCCCchhhhhHHHhhhhhHH
Q 046386 459 WLTIALLPTPVAFCLLATS--GNAVALQAGTSLIGLSSGFIFAAAVSITSELF-------GPNSVGVNHNILITNIPIGS 529 (609)
Q Consensus 459 ~l~~~~~~~~~~~ll~~~~--~~~~~l~~~s~liG~~yG~~f~~~P~i~se~F-------G~k~fg~nyg~~~~a~~~gs 529 (609)
. ...++.+++.+++... ++...+++..++.|+++|..+.+.+++.+|.- |.+.-|..+++.....-++.
T Consensus 294 ~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~ 371 (428)
T PF13347_consen 294 I--IGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQ 371 (428)
T ss_pred h--hhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHH
Confidence 2 2333444444433323 47788999999999999999999999999876 56778888888877666666
Q ss_pred HHHHHHHHHHhhc
Q 046386 530 LVYGFLAAIVYDS 542 (609)
Q Consensus 530 ~~~~~i~g~iyD~ 542 (609)
-+.+.+.|.+-+.
T Consensus 372 ~la~~i~g~~l~~ 384 (428)
T PF13347_consen 372 GLAGAIVGLLLAL 384 (428)
T ss_pred HHHHHHHHHHHHH
Confidence 6666555555433
No 118
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.96 E-value=0.00013 Score=84.41 Aligned_cols=157 Identities=17% Similarity=0.012 Sum_probs=96.2
Q ss_pred hhhc-ccCCchHHHHHHHHHHHHhcCC-ccccccccHHHHHHhCCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHH
Q 046386 29 FFLM-AGQSRKWMILVATIWIQAFTGT-NFDFSAYSSDLKSVLGVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVV 105 (609)
Q Consensus 29 ~~~m-~~~~~Rw~~lvas~~v~l~~Gt-~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~v 105 (609)
.+|+ .....||+.++.+ +..+..+. .-.++.=-+++++|++++.+|.-.|..+.++|. ...++.|.+.|...++..
T Consensus 22 ~~lq~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~ 100 (633)
T TIGR00805 22 RCLQSLFSKIKVFSLLLT-CAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIV 100 (633)
T ss_pred hHHhhcCCcHHHHHHHHH-HHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceE
Confidence 4555 2233455544443 22222221 123455568999999999999999999999998 445666888888754443
Q ss_pred HHHHHHHHHHHHHHHHHHH--hh------------------------c-----------------C--cchhHHHHHHHH
Q 046386 106 LFMAAFMGFFGYGLQWLVI--SH------------------------V-----------------I--SLPYILVFFLCL 140 (609)
Q Consensus 106 llig~~~~~~GY~~~~l~~--~~------------------------~-----------------~--~~~~~~l~~~~~ 140 (609)
+.+|.++..+|-.+.-+.- .+ . . +..++.+.+.-+
T Consensus 101 i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 180 (633)
T TIGR00805 101 IGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQL 180 (633)
T ss_pred EEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHH
Confidence 3444333333332221110 00 0 0 012233334558
Q ss_pred HhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHH
Q 046386 141 LSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALA 186 (609)
Q Consensus 141 l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i 186 (609)
+.|.|.+..++.+..-...|+| ++|+..+|+.-....++.++-..+
T Consensus 181 l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~ll 227 (633)
T TIGR00805 181 LRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLL 227 (633)
T ss_pred HHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHH
Confidence 8999988888888888899998 678999998877777766654444
No 119
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.95 E-value=0.0017 Score=72.20 Aligned_cols=62 Identities=11% Similarity=0.242 Sum_probs=49.5
Q ss_pred chhHHHHHHHHhhhcchhhhHHHHHHHh-------hCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhc
Q 046386 481 VALQAGTSLIGLSSGFIFAAAVSITSEL-------FGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDS 542 (609)
Q Consensus 481 ~~l~~~s~liG~~yG~~f~~~P~i~se~-------FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~ 542 (609)
..+.+...+.|+++|..+.+.+++++|. .|.+.-|..++......=+|.-+++.+.|.+.|.
T Consensus 325 ~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~ 393 (473)
T PRK10429 325 LLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGL 393 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456677888999999999999999999 8888888899888776666766666666666554
No 120
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.94 E-value=0.0043 Score=69.25 Aligned_cols=63 Identities=14% Similarity=0.228 Sum_probs=56.4
Q ss_pred hhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccC
Q 046386 482 ALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNV 544 (609)
Q Consensus 482 ~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~ 544 (609)
.+....++.++++|..+...-.++++.=-.++-|+.|++..+...+|..+++.+.|.++|.-+
T Consensus 353 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 353 FVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred eeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 455668899999999999999999999998888999999999999999999999999998865
No 121
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.93 E-value=0.0011 Score=73.58 Aligned_cols=127 Identities=12% Similarity=0.028 Sum_probs=90.8
Q ss_pred CccccccccHHHHHHhCCChhh-hhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcch
Q 046386 54 TNFDFSAYSSDLKSVLGVSQVQ-LNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLP 131 (609)
Q Consensus 54 t~Y~fs~YS~~lk~~L~~sq~q-ln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~ 131 (609)
.--..+.=.|.+++.+|+|.+| .+.|..+...|= ..-++.|.+.|++.+..++.++.+. +.+.+...... ..
T Consensus 41 ~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~----Wsl~t~L~~fa--~S 114 (511)
T TIGR00806 41 FRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALS----FVCVWLLLLLG--TS 114 (511)
T ss_pred hhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH----HHHHHHHHHHH--HH
Confidence 3445666788999999999999 888888888876 3445669999998555555553333 22222222111 12
Q ss_pred hHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHH
Q 046386 132 YILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAG 187 (609)
Q Consensus 132 ~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~ 187 (609)
++.+.+.=++-|.+++... ++.+...++|| ++||.++|+.-+..-++.++-..+.
T Consensus 115 l~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ 170 (511)
T TIGR00806 115 VWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLG 170 (511)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666677888888777 88899999999 7799999999888888887766663
No 122
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.93 E-value=0.00014 Score=81.86 Aligned_cols=174 Identities=16% Similarity=0.210 Sum_probs=106.9
Q ss_pred HHhhhH-HHHHHHHHHHhhccccce-eecchhHH-HHHhcCCcc-cchhhHHHHHhhhhhhhhcc-chhhhhhhcccchh
Q 046386 383 LLVLRL-DFWLYYIAYFCGGAIGLV-YSNNLGQI-AQSLGESSR-TTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFART 457 (609)
Q Consensus 383 ~~l~~~-~Fwll~~~~~~g~g~Glm-~I~n~g~I-~~al~~~~~-~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~ 457 (609)
+.++++ .+|.++...++... +.. +...+... .+.++.+.. +...++.+.......-+.+| ++|.+ ++.+|
T Consensus 15 ~~~~~p~~~~~~~~~~~~~~~-~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~---~G~r~- 89 (500)
T PRK09584 15 NAFKQPKAFYLIFSIELWERF-GYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKV---LGTKR- 89 (500)
T ss_pred hhhcCCchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cchHH-
Confidence 345666 58888877766432 221 22223333 345666333 33444444444444445556 45542 23222
Q ss_pred HHHHHHHHHHHHHHHHHHhcC-CcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCC--chhhhhHHHhhhhhHHHHHHH
Q 046386 458 GWLTIALLPTPVAFCLLATSG-NAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNS--VGVNHNILITNIPIGSLVYGF 534 (609)
Q Consensus 458 ~~l~~~~~~~~~~~ll~~~~~-~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~--fg~nyg~~~~a~~~gs~~~~~ 534 (609)
.+.+..+++.++++++...+ ....+++.-.+.|++.|...+..++++.|+|..++ .+..+++..++..+|+.+++.
T Consensus 90 -~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~ 168 (500)
T PRK09584 90 -VIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSML 168 (500)
T ss_pred -HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHH
Confidence 33444445556655554222 22345566678899999999999999999997543 445678777888899999999
Q ss_pred HHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHH
Q 046386 535 LAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAA 583 (609)
Q Consensus 535 i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~ 583 (609)
+.|.+.|..+ ||..|.+.++..+++++.
T Consensus 169 i~g~l~~~~g---------------------~~~~F~i~~i~~~i~~i~ 196 (500)
T PRK09584 169 ATPWLAAKYG---------------------WSVAFALSVVGMLITVVN 196 (500)
T ss_pred HHHHHHHhhC---------------------HHHHHHHHHHHHHHHHHH
Confidence 9999988653 999998876655555443
No 123
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=97.92 E-value=0.00018 Score=78.96 Aligned_cols=149 Identities=11% Similarity=0.039 Sum_probs=101.4
Q ss_pred HHHHhcCCcc-cchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhc----CCcchhHHHH
Q 046386 414 IAQSLGESSR-TTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATS----GNAVALQAGT 487 (609)
Q Consensus 414 I~~al~~~~~-~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~----~~~~~l~~~s 487 (609)
..++.+.+.. .....++..+...++.+..| ++|.+ +++| .+.+..++.+++.++.... .+...+++.-
T Consensus 52 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~----g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 125 (438)
T TIGR00712 52 YLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSDRS----NPRV--FLPAGLILSAAVMLLMGFVPWATSSIAIMFVLL 125 (438)
T ss_pred HHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc----CCce--ehHHHHHHHHHHHHHHhccccccchHHHHHHHH
Confidence 3344554332 45567777888888888888 55554 4222 3333333444444433311 1223345667
Q ss_pred HHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccH
Q 046386 488 SLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYF 567 (609)
Q Consensus 488 ~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~ 567 (609)
.+.|++.|..++.....+.|+|..|+-|+..|+..++..+|+.+++.+.+...+.+. -+|
T Consensus 126 ~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~--------------------~w~ 185 (438)
T TIGR00712 126 FLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFN--------------------DWH 185 (438)
T ss_pred HHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhh--------------------hhH
Confidence 788999999999999999999999999999999989999999888877766554322 289
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 046386 568 LTFVLWGCVSVVGLAASVLLF 588 (609)
Q Consensus 568 ~tF~i~a~~~~~~~~~sl~l~ 588 (609)
.+|++.+..+++..++.+++.
T Consensus 186 ~~f~~~~~~~~i~~~~~~~~~ 206 (438)
T TIGR00712 186 AALYFPAICAIIVALFAFAMM 206 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 999998888877666655544
No 124
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=97.91 E-value=9.4e-05 Score=78.05 Aligned_cols=141 Identities=17% Similarity=0.137 Sum_probs=89.6
Q ss_pred HHHHHHHHHHhhccccceeecchhH-HHHHhcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHH
Q 046386 389 DFWLYYIAYFCGGAIGLVYSNNLGQ-IAQSLGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALL 465 (609)
Q Consensus 389 ~Fwll~~~~~~g~g~Glm~I~n~g~-I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~ 465 (609)
.||..++++++......++..-..+ +.++++.+. ..+...++..+...++.+..| ++|.+ +.+ ..+.+..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----g~r--~~~~~~~~ 75 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF----GPR--YTTTLSLL 75 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh----Cch--HHHHHHHH
Confidence 5788888777654333333333332 566677643 345677788888888888888 55554 322 23444445
Q ss_pred HHHHHHHHHHhcC-CcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHH
Q 046386 466 PTPVAFCLLATSG-NAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLA 536 (609)
Q Consensus 466 ~~~~~~ll~~~~~-~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~ 536 (609)
++.++.++....+ +...+++...+.|++. +.+....++++|++..|+-++..++......+|..+++.+.
T Consensus 76 ~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 146 (366)
T TIGR00886 76 LLAIPCLWAGLAVQSYSVLLLLRLFIGIAG-GSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVM 146 (366)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-hhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHH
Confidence 5555555554344 5566777888889984 45677788999999988889888887644445554444333
No 125
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=97.91 E-value=2.4e-05 Score=82.07 Aligned_cols=148 Identities=14% Similarity=0.164 Sum_probs=104.0
Q ss_pred HHHHHhcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHH
Q 046386 413 QIAQSLGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLI 490 (609)
Q Consensus 413 ~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~li 490 (609)
.+.++++.+. ......++..+...++.+..| ++|.+ +++| .+.+..++..++.++....++...+.+.-.+.
T Consensus 20 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~----g~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (379)
T TIGR00881 20 YLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS----NPRV--FLPIGLILCAIVNLFFGFSTSLWVMAALWALN 93 (379)
T ss_pred HHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh----CCee--hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 4555566633 345677888888888888888 56654 3222 34444445555555554345556677888899
Q ss_pred HhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHH-HHHHHHhhccCCCCCCcCcccCCCcccccccccHHH
Q 046386 491 GLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYG-FLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLT 569 (609)
Q Consensus 491 G~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~-~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~t 569 (609)
|++.|..+....++++|++..|+-+...|+...+..+|..+++ .+.+.+.+.. .+|..
T Consensus 94 g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---------------------~~~~~ 152 (379)
T TIGR00881 94 GIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELY---------------------SWHWV 152 (379)
T ss_pred HhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcC---------------------CchhH
Confidence 9999999999999999999999999999999888889998887 4555554432 37788
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 046386 570 FVLWGCVSVVGLAASVLL 587 (609)
Q Consensus 570 F~i~a~~~~~~~~~sl~l 587 (609)
|.+.+.++++..++.++.
T Consensus 153 ~~~~~~~~~~~~~~~~~~ 170 (379)
T TIGR00881 153 FIVPGIIAIIVSLICFLL 170 (379)
T ss_pred HHHHHHHHHHHHHHHhee
Confidence 888777666655554443
No 126
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=97.91 E-value=9e-05 Score=77.62 Aligned_cols=150 Identities=15% Similarity=0.177 Sum_probs=107.0
Q ss_pred hhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHH
Q 046386 411 LGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTS 488 (609)
Q Consensus 411 ~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~ 488 (609)
...+.++++.+. ......++..+...++++..| ++|++ +++|. +.+..++.+++.++.+..++...+++...
T Consensus 26 ~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~----G~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (377)
T TIGR00890 26 APPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF----GPRAV--AMLGGILYGLGFTFYAIADSLAALYLTYG 99 (377)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc----Cccch--hHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556666533 356678888888999999888 56654 43333 33334445555555443455566778888
Q ss_pred HHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHH
Q 046386 489 LIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFL 568 (609)
Q Consensus 489 liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~ 568 (609)
+.|++.|..+......+.+.|. |+-+...++...+..+|..+.+.+.+.+.|.. -+|.
T Consensus 100 ~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---------------------~~~~ 157 (377)
T TIGR00890 100 LASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLE---------------------GVPA 157 (377)
T ss_pred HHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcc---------------------cHHH
Confidence 9999999988888888899996 78899999999999999888776666666643 2899
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 046386 569 TFVLWGCVSVVGLAASVLLF 588 (609)
Q Consensus 569 tF~i~a~~~~~~~~~sl~l~ 588 (609)
.|.+.+.++++..++.+.+.
T Consensus 158 ~f~~~~~~~~~~~~~~~~~~ 177 (377)
T TIGR00890 158 AFIYMGIIFLLVIVLGAFLI 177 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhe
Confidence 99998888777766655443
No 127
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=97.91 E-value=0.0001 Score=79.38 Aligned_cols=146 Identities=16% Similarity=0.182 Sum_probs=99.1
Q ss_pred HHHHHhcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHH
Q 046386 413 QIAQSLGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIG 491 (609)
Q Consensus 413 ~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG 491 (609)
.+.++++.+. ......+...+...+|.+..| ++.||++.+|. +.+..++..++.++....++...+.+.-.+.|
T Consensus 40 ~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g---~l~dr~g~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 114 (406)
T PRK11551 40 RMAQEFGLDVAQMGWAFSAGILGLLPGALLGG---RLADRIGRKRI--LIVSVALFGLFSLATAQAWDFPSLLVARLLTG 114 (406)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhCCchh--HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 4555565532 234556666666666776667 44444443333 33333334444444433455666788889999
Q ss_pred hhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHH
Q 046386 492 LSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFV 571 (609)
Q Consensus 492 ~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~ 571 (609)
++.|..++..++++.|+|..|+-++..|+......+|..+++.+.+.+.+.. -++..|.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---------------------~~~~~~~ 173 (406)
T PRK11551 115 VGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDA---------------------AWRHIFY 173 (406)
T ss_pred hhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc---------------------CHHHHHH
Confidence 9999999999999999999999999999999999999998888777665533 3888898
Q ss_pred HHHHHHHHHHHHH
Q 046386 572 LWGCVSVVGLAAS 584 (609)
Q Consensus 572 i~a~~~~~~~~~s 584 (609)
+.+.++++.+++.
T Consensus 174 ~~~~~~~~~~~~~ 186 (406)
T PRK11551 174 VGGVGPLLLVPLL 186 (406)
T ss_pred HHHHHHHHHHHHH
Confidence 8766555444333
No 128
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.88 E-value=0.028 Score=62.92 Aligned_cols=150 Identities=19% Similarity=0.148 Sum_probs=85.8
Q ss_pred ccHHHHHHhC--CChhhhhHHHHh----hhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhH
Q 046386 61 YSSDLKSVLG--VSQVQLNYLATA----SDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYI 133 (609)
Q Consensus 61 YS~~lk~~L~--~sq~qln~I~~a----~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~ 133 (609)
+...+.+|+| .|..+++.+=.+ --+|. .-.+++|.++|...+-..+++..++..++=.+...+.... .+.
T Consensus 41 ~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~---~~e 117 (485)
T KOG0569|consen 41 INETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAP---SFE 117 (485)
T ss_pred HHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhh---hHH
Confidence 4567788888 555555554222 22343 3345558888888776666665555444443332222221 233
Q ss_pred HHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHhh-hCCCCh-hHHHHHHHHHHHHHH
Q 046386 134 LVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGNA-INPSSH-ALYLLLNALIPLITS 210 (609)
Q Consensus 134 ~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~~-~f~~d~-~~fLllla~~p~~v~ 210 (609)
.+.+-=++.|...+......-.--.+-=| +.||.+..+.--++.++-.+..++..- +++++. =.++++...+|.++.
T Consensus 118 ~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~ 197 (485)
T KOG0569|consen 118 MLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQ 197 (485)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHH
Confidence 33333377775555444444455566778 459988776666666655555455433 444433 368888888888887
Q ss_pred Hhh
Q 046386 211 LAA 213 (609)
Q Consensus 211 ~~~ 213 (609)
++.
T Consensus 198 l~~ 200 (485)
T KOG0569|consen 198 LAL 200 (485)
T ss_pred HHH
Confidence 776
No 129
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.87 E-value=0.0001 Score=84.15 Aligned_cols=178 Identities=19% Similarity=0.162 Sum_probs=115.5
Q ss_pred hhhHHHHHHHHHHHhhcc---cccee-ecchhHHHHHhcCCcccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHH
Q 046386 385 VLRLDFWLYYIAYFCGGA---IGLVY-SNNLGQIAQSLGESSRTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGW 459 (609)
Q Consensus 385 l~~~~Fwll~~~~~~g~g---~Glm~-I~n~g~I~~al~~~~~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~ 459 (609)
.+++.|+..+.++.+..- .++.. -+-+.+|.+++|.+...+-++...++.++.+=.+.| +||.+ .|++.
T Consensus 37 ~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlf------GRr~~ 110 (599)
T PF06609_consen 37 YRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLF------GRRYF 110 (599)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHh------cchHH
Confidence 355677776655544221 12211 122567888888866666677777777888777778 89987 45556
Q ss_pred HHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHH
Q 046386 460 LTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIV 539 (609)
Q Consensus 460 l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~i 539 (609)
++...++..++.++-+.-++...+..+.++.|+++|.... ....++|+--.|+-+.-+.+......+....++.++..+
T Consensus 111 ~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~ 189 (599)
T PF06609_consen 111 FIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLF 189 (599)
T ss_pred HHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHh
Confidence 6666667778888777566678889999999999998875 566689999888775544443222222222344444444
Q ss_pred hhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Q 046386 540 YDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLLFLR 590 (609)
Q Consensus 540 yD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l~~r 590 (609)
+.. + -.|+.|++.+..+.+++++..+.+++
T Consensus 190 ~~~-~--------------------~WRw~~~~~~i~~~i~~vl~~~fY~P 219 (599)
T PF06609_consen 190 AAH-S--------------------GWRWIFYIFIIWSGIALVLIFFFYFP 219 (599)
T ss_pred ccC-C--------------------CcchHHHHHHHHHHHHHHHHHHHhCC
Confidence 321 1 37888888888877777766655443
No 130
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.87 E-value=0.0086 Score=64.12 Aligned_cols=168 Identities=16% Similarity=0.126 Sum_probs=101.3
Q ss_pred HhhhHHHHHHHHHHHhhccccceeecchhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHH
Q 046386 384 LVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTI 462 (609)
Q Consensus 384 ~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~ 462 (609)
..+++.-|.+-+-|.+....=-..+.=+.+|.++.|.++ .+..++|+..+..-..-++.. .+.+|.+=.|+ +...
T Consensus 204 vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P---~la~R~~n~r~-~~~~ 279 (395)
T COG2807 204 VWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIP---LLARRSKNQRP-LVVL 279 (395)
T ss_pred cccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHH---HHHHHhcccch-HHHH
Confidence 567777787666555544332345566788888888854 355788888887777666655 44444333444 3333
Q ss_pred HHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhh-hHHHhhhhhH---HHHHHHHHHH
Q 046386 463 ALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNH-NILITNIPIG---SLVYGFLAAI 538 (609)
Q Consensus 463 ~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~ny-g~~~~a~~~g---s~~~~~i~g~ 538 (609)
..+++.++.+=+...+... .++-..+.|++-|+.|++.-+.+.+..-..+-...- |+. -++| +-++|.++|.
T Consensus 280 ~~~~~l~G~~G~~~~P~~~-~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgma---Qg~GYllAa~GP~l~G~ 355 (395)
T COG2807 280 ALLLMLVGLVGLLLAPGQL-PILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMA---QGVGYLLAAFGPWLFGF 355 (395)
T ss_pred HHHHHHHHHHHHHHhhhhH-HHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHh---hhhhHHHHhhhhhhHhH
Confidence 3334444443222123222 222259999999999999988888877654433221 222 2233 2335778889
Q ss_pred HhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHH
Q 046386 539 VYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVV 579 (609)
Q Consensus 539 iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~ 579 (609)
++|..+ .++.++...+...++
T Consensus 356 lhDa~g--------------------sw~~~~~~l~~~~i~ 376 (395)
T COG2807 356 LHDATG--------------------SWSAPLVLLALATLL 376 (395)
T ss_pred HHHhcC--------------------ChHHHHHHHHHHHHH
Confidence 999987 688887666554443
No 131
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=97.86 E-value=0.0046 Score=70.11 Aligned_cols=101 Identities=20% Similarity=0.215 Sum_probs=69.2
Q ss_pred HhCCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHH-HHHhhcCcchhHHHHHHHHHhhcc
Q 046386 68 VLGVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQW-LVISHVISLPYILVFFLCLLSGLS 145 (609)
Q Consensus 68 ~L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~-l~~~~~~~~~~~~l~~~~~l~G~g 145 (609)
.+.=|..++..+.++..+-. .++.++|.++|...+.-+++.+-+...+...... +...+. ++.|.++.+.++.|++
T Consensus 39 ~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~--~~~~~Ll~~~fl~g~~ 116 (524)
T PF05977_consen 39 QLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGL--LSPWLLLILTFLLGIG 116 (524)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCc--CCHHHHHHHHHHHHHH
Confidence 34445667777788888876 7899999999999887777776555544443332 333343 3457888888999998
Q ss_pred hhhhhhHHHHHHHHhcCCCC-cchhh
Q 046386 146 ITWFNTVCFVLCIQNFPANR-ALALS 170 (609)
Q Consensus 146 ~~~~~taalvT~~kNFP~~R-G~avg 170 (609)
.++.+.+--..--+--|+++ ..+.+
T Consensus 117 ~a~~~PA~~A~ip~lV~~~~L~~A~a 142 (524)
T PF05977_consen 117 SAFFNPAWQAIIPELVPKEDLPAANA 142 (524)
T ss_pred HHHHHHHHHHHHHHhccHhhHHHHHH
Confidence 88877776566667778655 33444
No 132
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.84 E-value=0.0055 Score=70.22 Aligned_cols=132 Identities=12% Similarity=0.079 Sum_probs=74.1
Q ss_pred chHHHHHHHHHHHHhcC--CccccccccHHHHHHhCCChhhhhHHHHhhhcccchh-hhhhhhhhhhhHHHHHHHHHHHH
Q 046386 37 RKWMILVATIWIQAFTG--TNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKLFG-WLSGLALMYFPLWVVLFMAAFMG 113 (609)
Q Consensus 37 ~Rw~~lvas~~v~l~~G--t~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~G-~~sGll~~~~P~~~vllig~~~~ 113 (609)
.|.+...+++.+..++. ..+..+.-=+++-..+|=+ .+...++++-.++...+ -+.|-+.|.+.++-+.++|.++.
T Consensus 40 ~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~ 118 (599)
T PF06609_consen 40 PRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLG 118 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHH
Confidence 46666666665555443 1222222234566666654 33345666666665333 34599999999998999999999
Q ss_pred HHHHHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhh
Q 046386 114 FFGYGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFN 176 (609)
Q Consensus 114 ~~GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~ 176 (609)
.+|..+.. +.. ..-.++.-..+.|.|.+......+. ...--| ++|+...+++...+
T Consensus 119 vvG~Iv~a---tA~---~~~~~iag~~l~GvgaG~~~~~~~~-isEl~p~k~R~~~~~~~~~~~ 175 (599)
T PF06609_consen 119 VVGSIVCA---TAQ---NMNTFIAGMVLYGVGAGVQELAALA-ISELVPNKWRGLGLAIASIPF 175 (599)
T ss_pred HhHHHHhh---cCC---cHHHHHHHHHHHHHhhHHHHHHHHH-HHHhcccchhhhHhHHHHHHH
Confidence 99987652 211 1112333444545444332222222 456667 77887766655433
No 133
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.83 E-value=0.0041 Score=68.15 Aligned_cols=173 Identities=17% Similarity=0.244 Sum_probs=95.4
Q ss_pred CCCCCCCCCccCCCCCCcccchhhhhhh----cccCCchHHHHHHHHHHHHhcCCcc-ccccccHHHHHHhCCChhhhhH
Q 046386 4 SSKSTDTEPEKKRRPVNIYRTLIHLFFL----MAGQSRKWMILVATIWIQAFTGTNF-DFSAYSSDLKSVLGVSQVQLNY 78 (609)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----m~~~~~Rw~~lvas~~v~l~~Gt~Y-~fs~YS~~lk~~L~~sq~qln~ 78 (609)
.+++.++++++.-+|.+.--.+-|=--. -+-..+||+.|++..++..+.|... .|+.-+.....-+| |..-..-
T Consensus 5 ~~~~~~~q~~~~~~~l~~~~g~~e~~~~~~~~~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~w 83 (480)
T KOG2563|consen 5 TSSSENRQVPIAAKPLEANGGLAENRAAAAPGHRVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADW 83 (480)
T ss_pred cccccCcccccCCCCcCcccCCCCChhhhccccccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHH
Confidence 4555555555555555443332221000 1123589999999998888877642 35555555677777 3322222
Q ss_pred HHHhhhcccchhhhhhhhhhh----hhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhH--HHHHHHHHhhcchhhhhhH
Q 046386 79 LATASDLGKLFGWLSGLALMY----FPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYI--LVFFLCLLSGLSITWFNTV 152 (609)
Q Consensus 79 I~~a~~lG~~~G~~sGll~~~----~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~--~l~~~~~l~G~g~~~~~ta 152 (609)
++. +=+.++++.|+..+| ......+++|++++.+|=.+--.+..-.+++..| .+..--.+.+.++-++...
T Consensus 84 lsm---Iym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~l 160 (480)
T KOG2563|consen 84 LSM---IYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGL 160 (480)
T ss_pred HHH---HHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhcc
Confidence 222 122234455555555 4778889999999988865533332222222233 2222224555555565555
Q ss_pred HHHHHHHhcC-CCCcchhhhhhhhhh--hhHHH
Q 046386 153 CFVLCIQNFP-ANRALALSLTVSFNG--VSAAI 182 (609)
Q Consensus 153 alvT~~kNFP-~~RG~avgl~k~~~G--LSaaI 182 (609)
+=+-+.-+|| ++|.+|..+ +.+| |+.++
T Consensus 161 PskiA~~WF~~~qra~A~~~--~v~~n~LGvav 191 (480)
T KOG2563|consen 161 PSKIAAVWFPPDQRAIATVL--GVMGNPLGVAV 191 (480)
T ss_pred ccHHHHhhCCcchhhhhhhH--HHhcchHHHHH
Confidence 5588889997 778776653 3344 55554
No 134
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=97.82 E-value=0.00017 Score=80.64 Aligned_cols=151 Identities=15% Similarity=0.067 Sum_probs=111.0
Q ss_pred hhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHH
Q 046386 411 LGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTS 488 (609)
Q Consensus 411 ~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~ 488 (609)
+.+|.++++.+. +.+..++.+.+....+-+..| ++|++ + |.+.+....++..++.++....++...+.+.-.
T Consensus 29 ~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~----G--rk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~ 102 (495)
T PRK14995 29 APTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI----G--FKRLLMLGGTLFGLASLAAAFSPTASWLIATRA 102 (495)
T ss_pred HHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh----c--cHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 466777776633 345677888888888888888 56654 3 222444444455555555554566677888889
Q ss_pred HHHhhhcchhhhHHHHHHHhh-CCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccH
Q 046386 489 LIGLSSGFIFAAAVSITSELF-GPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYF 567 (609)
Q Consensus 489 liG~~yG~~f~~~P~i~se~F-G~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~ 567 (609)
+.|++.|+.+...-+++.+.| ..|+-+...|+...+..+|..+++.+.|.+.|..+ +|
T Consensus 103 l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~g---------------------wr 161 (495)
T PRK14995 103 LLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFY---------------------WG 161 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---------------------hH
Confidence 999999988777777777877 67889999999999999999999999999987643 88
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 046386 568 LTFVLWGCVSVVGLAASVLLF 588 (609)
Q Consensus 568 ~tF~i~a~~~~~~~~~sl~l~ 588 (609)
..|++...++++.+++..+..
T Consensus 162 ~~f~i~~~~~~~~~~l~~~~l 182 (495)
T PRK14995 162 SVFLINVPIVLVVMGLTARYV 182 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhC
Confidence 999988777776666655543
No 135
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=97.82 E-value=0.00028 Score=76.23 Aligned_cols=133 Identities=17% Similarity=0.147 Sum_probs=89.3
Q ss_pred cchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcc---hhHHHHHHHHhhhcchhhh
Q 046386 424 TTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAV---ALQAGTSLIGLSSGFIFAA 500 (609)
Q Consensus 424 ~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~---~l~~~s~liG~~yG~~f~~ 500 (609)
.....+++.+...++.+.+| ++.||+++ |+ .+.+..++..++.++....+... .+.+.-.+.|++.|..+..
T Consensus 73 ~~~~~~~~~~~~~i~~~~~g---~l~d~~gr-r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 147 (481)
T TIGR00879 73 WGLVVSIFLVGGFIGALFAG---WLSDRFGR-KK-SLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASAL 147 (481)
T ss_pred HHHHHHHHHHHHHHHHHHhh---Hhhhhhhh-HH-HHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhH
Confidence 34566677777777777777 34444443 22 33343444444444442222222 5778889999999999999
Q ss_pred HHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHH---HHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHH
Q 046386 501 AVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLA---AIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVS 577 (609)
Q Consensus 501 ~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~---g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~ 577 (609)
..++++|++..|+-+...++..++..+|..+++.+. +...+.. -+|..|.+.+..+
T Consensus 148 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~---------------------~w~~~f~~~~~~~ 206 (481)
T TIGR00879 148 VPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTL---------------------GWRIPLGLQLIPA 206 (481)
T ss_pred HHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCc---------------------cHHHHHHHHHHHH
Confidence 999999999999999999999888899998888766 2221111 3899998865554
Q ss_pred HHHHH
Q 046386 578 VVGLA 582 (609)
Q Consensus 578 ~~~~~ 582 (609)
++.++
T Consensus 207 ~~~~~ 211 (481)
T TIGR00879 207 GLLFL 211 (481)
T ss_pred HHHHH
Confidence 44443
No 136
>PRK03893 putative sialic acid transporter; Provisional
Probab=97.80 E-value=0.00017 Score=79.90 Aligned_cols=150 Identities=15% Similarity=0.169 Sum_probs=100.8
Q ss_pred HHHHHHHHHHhhccccceeecchhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHH
Q 046386 389 DFWLYYIAYFCGGAIGLVYSNNLGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPT 467 (609)
Q Consensus 389 ~Fwll~~~~~~g~g~Glm~I~n~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~ 467 (609)
.++.+++..++..-...+......++.++++.+. .....++++.+...++.+..| ++.||++++| .+.+..++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g---~l~dr~g~r~--~~~~~~~~~ 95 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLG---AMGDRYGRRL--AMVISIVLF 95 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhCcHH--HHHHHHHHH
Confidence 5555555554422111122223455666666533 244567777777777777777 3444444222 344444445
Q ss_pred HHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhcc
Q 046386 468 PVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSN 543 (609)
Q Consensus 468 ~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~ 543 (609)
.++.++....++...+++.-.+.|++.|+.++...+++.|.|-.|+-+.-.++...+..+|..+++.+.+.+.+..
T Consensus 96 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 171 (496)
T PRK03893 96 SVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVW 171 (496)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 5555554434455668888999999999999999999999999998999999999999999999999999887743
No 137
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.78 E-value=0.081 Score=59.64 Aligned_cols=132 Identities=14% Similarity=0.071 Sum_probs=79.6
Q ss_pred CccccccccHH-HHHHhCCChhhhhHHHHhhhcccc-hhhhhhhhhhhh-hHHHHHHHHHHHHHHHHHHHHHHHhhcCcc
Q 046386 54 TNFDFSAYSSD-LKSVLGVSQVQLNYLATASDLGKL-FGWLSGLALMYF-PLWVVLFMAAFMGFFGYGLQWLVISHVISL 130 (609)
Q Consensus 54 t~Y~fs~YS~~-lk~~L~~sq~qln~I~~a~~lG~~-~G~~sGll~~~~-P~~~vllig~~~~~~GY~~~~l~~~~~~~~ 130 (609)
+.|....+-|. +++.+|+++.+...+-.+..++.+ ..++.|.+.|.. .+.-++.+|.++..+|+.+... .+. ..
T Consensus 24 s~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~--~~~-~~ 100 (493)
T PRK15462 24 SFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGA--SEI-HP 100 (493)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHH--hhc-ch
Confidence 44545444444 466799999999888777776654 445779999997 7777778888888888865421 111 11
Q ss_pred hhHHHHHHHHHhhcchhhhhhHHHHHHHHhcCC---CCcchhhhhhhhhhhhHHHHHHHHhhh
Q 046386 131 PYILVFFLCLLSGLSITWFNTVCFVLCIQNFPA---NRALALSLTVSFNGVSAAIYALAGNAI 190 (609)
Q Consensus 131 ~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP~---~RG~avgl~k~~~GLSaaI~s~i~~~~ 190 (609)
..+.+.+.....|+|....+.. ....+.||+ +|+.+.++--....+++.+-..+...+
T Consensus 101 ~~~~l~l~li~iG~G~~~~~~~--alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L 161 (493)
T PRK15462 101 SFLYLSLAIIVCGYGLFKSNVS--CLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYA 161 (493)
T ss_pred hHHHHHHHHHHHhcccccccHH--HHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHH
Confidence 1122222223344432222222 335788995 488888877777667665555554433
No 138
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.75 E-value=0.00031 Score=76.82 Aligned_cols=187 Identities=14% Similarity=0.088 Sum_probs=120.4
Q ss_pred HHHHhhhHHHHHHHHHHHhhccccceeecchhHHH-HHhcCCcccchhhHHHHHhhhhhhhh----ccchhhhhhhcccc
Q 046386 381 ARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIA-QSLGESSRTTTLLTLYSSFSFFGRLL----SAAPDYMRAKVYFA 455 (609)
Q Consensus 381 ~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~-~al~~~~~~~~~VSl~Si~n~~GRl~----~g~SD~l~~~~~~~ 455 (609)
..+.+|+++||.+- .+.+|..+--...++.-++. +....++.. =..+++..+.+|=++ ..+++++.+|++.+
T Consensus 213 ~~~l~k~~~fw~~~-l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~--g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k 289 (412)
T PF01306_consen 213 VLSLFKMRNFWFFV-LFVIGVAAIYDVFDQQFPIYFASFFQSAGQ--GNQMYGYLWSVQVFLEALMMFFSPWLINRIGAK 289 (412)
T ss_dssp HHHHTTSHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTSSSHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
T ss_pred HHHHhcchhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhccccc--ChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChH
Confidence 45688999999853 34444322222222221111 122222211 223455555555544 34688999999855
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHH-HhhhhhHHHHHHH
Q 046386 456 RTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNIL-ITNIPIGSLVYGF 534 (609)
Q Consensus 456 R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~-~~a~~~gs~~~~~ 534 (609)
+... +..+++++=....+..+++..+.+.=.+=|+.++...--.-=.+++.|..|-.+|.|.+. ..+-.+|..+++.
T Consensus 290 ~~Ll--lag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~ 367 (412)
T PF01306_consen 290 NLLL--LAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSP 367 (412)
T ss_dssp HHHH--HHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHH
T ss_pred hHHH--HHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4432 223334433333344566777888888889999888888888999999988888999885 5788889999999
Q ss_pred HHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046386 535 LAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLLFLRTRH 593 (609)
Q Consensus 535 i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l~~r~r~ 593 (609)
++|.+||+-+ |+.+|.+++++.+...+++.+....+|+
T Consensus 368 ~~G~lyd~~G---------------------~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 368 LAGYLYDRIG---------------------FQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred hHHhhHhhcC---------------------cHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 9999999986 9999999999888888888777555443
No 139
>PRK12307 putative sialic acid transporter; Provisional
Probab=97.73 E-value=0.00039 Score=75.33 Aligned_cols=127 Identities=15% Similarity=0.150 Sum_probs=87.5
Q ss_pred hHHHHHhcCCcc-cchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHH
Q 046386 412 GQIAQSLGESSR-TTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLI 490 (609)
Q Consensus 412 g~I~~al~~~~~-~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~li 490 (609)
..|.++++.+.. .....++..+...+|-+..| ++.||+++ ++.+.+..++.+++.++....++...+++.-.+.
T Consensus 42 ~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g---~l~dr~g~--r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 116 (426)
T PRK12307 42 YLIKADLGLTDMEGAFLATAAFIGRPFGGALFG---LLADKFGR--KPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIV 116 (426)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhCC--hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 344455555322 33444555555555555556 45555543 3344444455555555544345566788889999
Q ss_pred HhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhcc
Q 046386 491 GLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSN 543 (609)
Q Consensus 491 G~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~ 543 (609)
|++.|+.+....+++.|.|..|+-++..|+...+..+|..+++.+.+.+.|..
T Consensus 117 G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~ 169 (426)
T PRK12307 117 GMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY 169 (426)
T ss_pred HHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC
Confidence 99999999999999999999999999999998999999999888877776543
No 140
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=97.72 E-value=0.00016 Score=78.45 Aligned_cols=148 Identities=12% Similarity=0.023 Sum_probs=96.6
Q ss_pred hHHHHHHHHHHHhhccccceeecchhHHHHHhcCCcc-cchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHH
Q 046386 387 RLDFWLYYIAYFCGGAIGLVYSNNLGQIAQSLGESSR-TTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALL 465 (609)
Q Consensus 387 ~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~al~~~~~-~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~ 465 (609)
+++||.+++..++..-..-++...+..+.++++.+.. ....++.+.+...+.-+..| ++.||++++|. +.+..+
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G---~laDr~grr~v--l~~~~~ 76 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVG---AFADSFPKGRV--MFIANG 76 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhh---HhhhccCCchh--hHHHHH
Confidence 5689999988877542122334444455555554322 23344555555555555566 45555544443 233333
Q ss_pred HHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhc
Q 046386 466 PTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDS 542 (609)
Q Consensus 466 ~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~ 542 (609)
+..++.++.....+ .++.-.+.|++.|......-+++.|++..|+.++..|++.+...+|..+++.++|.++|.
T Consensus 77 ~~~~~~~~~~~~~~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~ 150 (393)
T PRK11195 77 IKLLGCLLMLFGIH---PLLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP 150 (393)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333221111 255667899999999999999999999999999999999988888999999999999883
No 141
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=97.72 E-value=0.00029 Score=76.57 Aligned_cols=144 Identities=14% Similarity=0.140 Sum_probs=100.1
Q ss_pred HHHhcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhh
Q 046386 415 AQSLGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLS 493 (609)
Q Consensus 415 ~~al~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~ 493 (609)
.++++.+. ......++..+...+.++..| ++.||++.+| .+....++..++.++....++...+++...+.|++
T Consensus 38 ~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G---~l~dr~g~k~--~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~ 112 (400)
T PRK11646 38 VDQLGWAAVMVGIALGLRQFIQQGLGIFGG---AIADRFGAKP--MIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLG 112 (400)
T ss_pred HHHhCCcHHHHHHHHHHHHHHHHHHHhhhh---HHHHHhCchH--HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 34455532 234455555666666677777 3444444322 34444445555555554345566678888889999
Q ss_pred hcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHH
Q 046386 494 SGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLW 573 (609)
Q Consensus 494 yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~ 573 (609)
.|.......+++.|.+..++-++.+|+..+...+|..+++.++|.+.+ . -++..|.+.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~-~---------------------g~~~~f~~~ 170 (400)
T PRK11646 113 GTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ-Y---------------------DFRLVCATG 170 (400)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h---------------------hHHHHHHHH
Confidence 888888888999999999999999999999999999999999998883 2 288899888
Q ss_pred HHHHHHHHHHHH
Q 046386 574 GCVSVVGLAASV 585 (609)
Q Consensus 574 a~~~~~~~~~sl 585 (609)
+..+++..++..
T Consensus 171 ~~~~~~~~i~~~ 182 (400)
T PRK11646 171 AVLFVLAAAFNA 182 (400)
T ss_pred HHHHHHHHHHHH
Confidence 777666554443
No 142
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.71 E-value=0.044 Score=61.53 Aligned_cols=184 Identities=18% Similarity=0.171 Sum_probs=127.9
Q ss_pred hHHHHhhhHHHHHHHHHHHhhccccceeecchhHHHHH--hcCCccc-chhhHHHHHhhhhhhhhccchhhhhhhcccch
Q 046386 380 SARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQS--LGESSRT-TTLLTLYSSFSFFGRLLSAAPDYMRAKVYFAR 456 (609)
Q Consensus 380 ~~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~a--l~~~~~~-~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R 456 (609)
+.++.-+.++.+.++++.++-. -|+..|..++.+... ++.+..+ ....-+..+....|=++.| ++.||++.++
T Consensus 273 t~k~~~~~~~~~~fLia~~l~~-dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g---~l~~r~g~k~ 348 (477)
T PF11700_consen 273 TFKEIRKLRQLFLFLIAYFLYS-DGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFG---WLQDRFGPKT 348 (477)
T ss_pred HHHHHHhChHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhCCch
Confidence 6677778888888878776643 567666666666554 5553332 2233344555777777777 6666666552
Q ss_pred hHHHHHHHHHHH-HHHHHHH-------hcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhH
Q 046386 457 TGWLTIALLPTP-VAFCLLA-------TSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIG 528 (609)
Q Consensus 457 ~~~l~~~~~~~~-~~~ll~~-------~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~g 528 (609)
...+.+.+++.. +...-+. ...++..+|+..+++|++.|+..+..=++.+++==..+-+.-||+..+.-=..
T Consensus 349 ~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~s 428 (477)
T PF11700_consen 349 KRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKAS 428 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHH
Confidence 222222222221 1111111 13456779999999999999999999999999988888899999998877788
Q ss_pred HHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHH
Q 046386 529 SLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLL 587 (609)
Q Consensus 529 s~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l 587 (609)
+.++|.++|.+-|..+ ..|..|.....+.++|+++-..+
T Consensus 429 s~lGPll~g~i~~~tg--------------------~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 429 SWLGPLLFGLITDATG--------------------SQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred HHHHHHHHHHHHHHhC--------------------CchhHHHHHHHHHHHHHHHHhhc
Confidence 8999999999999876 47888988888888777766444
No 143
>PRK10489 enterobactin exporter EntS; Provisional
Probab=97.71 E-value=8e-05 Score=80.90 Aligned_cols=174 Identities=18% Similarity=0.163 Sum_probs=107.4
Q ss_pred HHHhhhHHHHHHHHHHHhh-ccccceeecchhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhH
Q 046386 382 RLLVLRLDFWLYYIAYFCG-GAIGLVYSNNLGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTG 458 (609)
Q Consensus 382 ~~~l~~~~Fwll~~~~~~g-~g~Glm~I~n~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~ 458 (609)
+...++++|+.+++..++. .+.+.. .--.....++++.+. ......+...+...++.+..| ++|++ +++|..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~----g~~~~l 85 (417)
T PRK10489 11 SLLKTHPAFRAVFIARFISIFGLGLL-GVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY----DRKKLI 85 (417)
T ss_pred HHHHhCCChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc----CCceEE
Confidence 3345788888877765442 222221 112233444554422 234556666666677777777 45554 433332
Q ss_pred HHHHHHHHHHHHHHHHH-----hcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHH
Q 046386 459 WLTIALLPTPVAFCLLA-----TSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYG 533 (609)
Q Consensus 459 ~l~~~~~~~~~~~ll~~-----~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~ 533 (609)
. ...++.+++.+++. ..++...+++...+.|+++|...+...+++.|++..++.++..++......+|..+++
T Consensus 86 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 163 (417)
T PRK10489 86 L--LARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISP 163 (417)
T ss_pred E--ehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHH
Confidence 2 12222222222211 1222345666777889999988888888999999988889988998888889999999
Q ss_pred HHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHH
Q 046386 534 FLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAA 583 (609)
Q Consensus 534 ~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~ 583 (609)
.++|.++|..+ ++..|.+.+.+++++.++
T Consensus 164 ~l~g~l~~~~~---------------------~~~~~~~~~~~~~~~~~~ 192 (417)
T PRK10489 164 ALGGLLIAAGG---------------------VAWNYGLAAAGTFITLLP 192 (417)
T ss_pred HHHHHHHHHHh---------------------hHHHHHHHHHHHHHHHHH
Confidence 99999998643 788887776665555443
No 144
>PRK09528 lacY galactoside permease; Reviewed
Probab=97.71 E-value=0.00016 Score=78.72 Aligned_cols=176 Identities=13% Similarity=0.095 Sum_probs=97.0
Q ss_pred HHhhhHHHHHHHHHHHhhccccc-eeecchhHHHHH-hcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhH
Q 046386 383 LLVLRLDFWLYYIAYFCGGAIGL-VYSNNLGQIAQS-LGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTG 458 (609)
Q Consensus 383 ~~l~~~~Fwll~~~~~~g~g~Gl-m~I~n~g~I~~a-l~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~ 458 (609)
...++++||.+++.+++... +. .+..-+....+. ++.+. +....+++..+...++++..| ++|. ++.+|..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr----~g~r~~~ 79 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFF-IWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDK----LGLKKHL 79 (420)
T ss_pred hhhcCcchHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hCchHHH
Confidence 35678899999887776442 22 222222222232 45432 345678888888888888888 4555 4433332
Q ss_pred HHHHHHHHHHHHHH-HHHhcCC---c--chhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHH
Q 046386 459 WLTIALLPTPVAFC-LLATSGN---A--VALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVY 532 (609)
Q Consensus 459 ~l~~~~~~~~~~~l-l~~~~~~---~--~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~ 532 (609)
.+...........+ .....+. . ....++..+.|.+++.........+.+ +. ++.|..||.......+|..++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~g~~~g~~~~~~~~g~~i~ 157 (420)
T PRK09528 80 LWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-VS-RRSGFEYGRARMWGSLGWALC 157 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-HH-hhccccchhhHHhhhHHHHHH
Confidence 22111111111111 1110000 0 111223344455555555555555433 33 567888888877778888888
Q ss_pred HHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHH
Q 046386 533 GFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLL 587 (609)
Q Consensus 533 ~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l 587 (609)
+.++|.++|.+ ++..|++.+.++++.+++.+.+
T Consensus 158 ~~~~g~l~~~~----------------------~~~~f~~~~~~~~~~~~~~~~~ 190 (420)
T PRK09528 158 AFIAGILFNIN----------------------PQINFWLGSGSALILLVLLFFA 190 (420)
T ss_pred HHHHHHHHhcC----------------------chHhHHHHHHHHHHHHHHHhcc
Confidence 88999998742 4677877777766655554433
No 145
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=97.67 E-value=0.00093 Score=72.34 Aligned_cols=148 Identities=16% Similarity=0.141 Sum_probs=94.5
Q ss_pred HHHHHHHHHhhcccccee--ecc-hhHHHHHhcCCcccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHH
Q 046386 390 FWLYYIAYFCGGAIGLVY--SNN-LGQIAQSLGESSRTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALL 465 (609)
Q Consensus 390 Fwll~~~~~~g~g~Glm~--I~n-~g~I~~al~~~~~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~ 465 (609)
-|++...++++....+++ ++- +.++.++++.+ ..++++..-...+|..+.. ...++.||++.+| .+...++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~lp~i~~~~~~s---~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~--~l~~~~~ 82 (393)
T PRK09705 8 NFMLLVLVLIGLNMRPLLTSVGPLLPQLRQASGMS---FSVAALLTALPVVTMGGLALAGSWLHQHVSERR--SVAISLL 82 (393)
T ss_pred HHHHHHHHHHHHHcchhhhccchhHHHHHHHhCCC---HHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchH--HHHHHHH
Confidence 355555555554443332 222 22333344442 2334444444444444433 3446666665443 3444555
Q ss_pred HHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhcc
Q 046386 466 PTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSN 543 (609)
Q Consensus 466 ~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~ 543 (609)
+.+++.++.+..++...+.+.-.+.|++.|......++++.+.|. ++.+...|....+..+|..+++.+.+.+.+..
T Consensus 83 l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~ 159 (393)
T PRK09705 83 LIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHS 159 (393)
T ss_pred HHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 566666666556667778889999999999999999999999996 78899999887777778888877777777653
No 146
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=97.65 E-value=0.00039 Score=77.07 Aligned_cols=175 Identities=13% Similarity=0.013 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHhhccccce---eecc-hhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHH
Q 046386 388 LDFWLYYIAYFCGGAIGLV---YSNN-LGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTI 462 (609)
Q Consensus 388 ~~Fwll~~~~~~g~g~Glm---~I~n-~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~ 462 (609)
+.+|..+...+++-..-.+ .++. ..++.++++.+. +.....+.+.+...++.+..| ++.||++.+|. +.+
T Consensus 25 ~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G---~l~Dr~g~r~~--l~~ 99 (467)
T PRK09556 25 KPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVG---YYADGKNTKQF--LPF 99 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhh---hHhhccCccch--HHH
Confidence 3466655555553322111 1111 344566666532 344567777777888888888 34445543333 322
Q ss_pred HHHHHHHHHHHHH-----hcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHH
Q 046386 463 ALLPTPVAFCLLA-----TSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAA 537 (609)
Q Consensus 463 ~~~~~~~~~ll~~-----~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g 537 (609)
..++.+++.+++. ..++...+.+.-.+.|++.|..+....++++|+|..|+.|...|+...+..+|..+++.+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~ 179 (467)
T PRK09556 100 LLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVAL 179 (467)
T ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHH
Confidence 2223332222221 12345567777788999999999999999999999999999999999999999988887776
Q ss_pred HHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHH
Q 046386 538 IVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASV 585 (609)
Q Consensus 538 ~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl 585 (609)
.+.+..-.. ..+..|.+.+.++++..++.+
T Consensus 180 ~~~~~~~~~------------------~~~~~f~~~g~~~~~~~i~~~ 209 (467)
T PRK09556 180 WGANYFFDG------------------HVIGMFIFPSIIALIIGFIGL 209 (467)
T ss_pred HHHHhhccC------------------cchhHHHHHHHHHHHHHHHHH
Confidence 655432100 255667776666554444433
No 147
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.63 E-value=0.055 Score=60.97 Aligned_cols=133 Identities=20% Similarity=0.100 Sum_probs=93.9
Q ss_pred hhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhH
Q 046386 74 VQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTV 152 (609)
Q Consensus 74 ~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~ta 152 (609)
.+...+....++|. ...+++|.+.|.+.+...++++.++..+|..+...+. .++.+...=++.|.|.+.....
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~------~~~~l~~GR~l~G~g~G~~~~~ 162 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAP------SWYQLIVGRILTGLGVGGASVL 162 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh------hHHHHHHHHHHhccchhhhhhc
Confidence 35578999999988 5566779999999998888998888888887775554 2344444448888888877666
Q ss_pred HHHHHHHhcCC-CCcchhhhhhhhhhhhHHHHHHHHhhhCCCC--hhHHHHHHHHHHHHHHHhh
Q 046386 153 CFVLCIQNFPA-NRALALSLTVSFNGVSAAIYALAGNAINPSS--HALYLLLNALIPLITSLAA 213 (609)
Q Consensus 153 alvT~~kNFP~-~RG~avgl~k~~~GLSaaI~s~i~~~~f~~d--~~~fLllla~~p~~v~~~~ 213 (609)
+-+-...-=|+ .||..+++....+. .|..+.-+...+.+++ .=...+.++..|.++-.+.
T Consensus 163 ~piy~sEiap~~~RG~l~~~~~l~~~-~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~ 225 (513)
T KOG0254|consen 163 APVYISEIAPAHIRGTLVSLYQLFIT-IGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG 225 (513)
T ss_pred chhhHhhcCChhhhHHHHHHHHHHHH-HHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH
Confidence 65666666674 89999999888888 5555556666666554 2235556666666555554
No 148
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=97.59 E-value=0.00058 Score=83.74 Aligned_cols=154 Identities=18% Similarity=0.110 Sum_probs=96.6
Q ss_pred HHhhhHHHHHHHHHHHhhccccceeecchhH-HHHHhcCCcc---cchhhHHHHHhhhhhhhhcc-chhhhhhhcccchh
Q 046386 383 LLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQ-IAQSLGESSR---TTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFART 457 (609)
Q Consensus 383 ~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~-I~~al~~~~~---~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~ 457 (609)
+.+++.+|+.++++.++......++..-+.. +....+.+.. .+...+++.+...++.+.+| ++|. ++.+|.
T Consensus 4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr----~grk~~ 79 (1146)
T PRK08633 4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADK----FSKNRV 79 (1146)
T ss_pred chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhccc----ccHHHH
Confidence 4678889999888777743222111111111 1122222111 23344555555666666667 4555 443333
Q ss_pred HHHHHHHHHHH---HHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHH
Q 046386 458 GWLTIALLPTP---VAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGF 534 (609)
Q Consensus 458 ~~l~~~~~~~~---~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~ 534 (609)
+.+..++.. +...+....++...+++.-++.|++.|..+....++++|++..++.+...|+..++..+|..+++.
T Consensus 80 --l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~ 157 (1146)
T PRK08633 80 --IRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTA 157 (1146)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHH
Confidence 222222211 111112223445667888889999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhc
Q 046386 535 LAAIVYDS 542 (609)
Q Consensus 535 i~g~iyD~ 542 (609)
++|.+.+.
T Consensus 158 l~~~l~~~ 165 (1146)
T PRK08633 158 LFSFLFES 165 (1146)
T ss_pred HHHHHHHh
Confidence 99988875
No 149
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=97.56 E-value=0.00047 Score=74.34 Aligned_cols=168 Identities=14% Similarity=0.126 Sum_probs=99.7
Q ss_pred hHHHHHHHHHHHhhc-cccceeecchhH-HHHHhcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHH
Q 046386 387 RLDFWLYYIAYFCGG-AIGLVYSNNLGQ-IAQSLGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTI 462 (609)
Q Consensus 387 ~~~Fwll~~~~~~g~-g~Glm~I~n~g~-I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~ 462 (609)
|++||.+....++.. +.+.... -+.. +.+.++.+. .....+++.++...++++..| ++|++.+ +|. +..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~gr----r~~--~~~ 73 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFP-FFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGL----KKH--LLW 73 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc----HHH--HHH
Confidence 578998765554432 2222222 2222 333455533 356789999999999999999 5666533 222 222
Q ss_pred HHHHHHHHH---HHHHhcC-----CcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHH
Q 046386 463 ALLPTPVAF---CLLATSG-----NAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGF 534 (609)
Q Consensus 463 ~~~~~~~~~---ll~~~~~-----~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~ 534 (609)
..+..+++. .++...+ ....+.+..++.|++++...+...+.+.|. .++.+.+||.....-.+|..+++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~g~~~g~~ 151 (396)
T TIGR00882 74 IISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKV--SRNSNFEYGKARMFGCVGWALCAS 151 (396)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHh--hhhcccccchhhhhcccHHHHHHH
Confidence 111111111 1111111 011234446777888888888888887774 255566777776666788888888
Q ss_pred HHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHH
Q 046386 535 LAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASV 585 (609)
Q Consensus 535 i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl 585 (609)
+.|.++|.+ ++..|.+.+.++++..++.+
T Consensus 152 ~~g~l~~~~----------------------~~~~f~~~~~~~~~~~~~~~ 180 (396)
T TIGR00882 152 IAGILFSID----------------------PQIVFWLGSGFALILMLLLM 180 (396)
T ss_pred HHhhhhccC----------------------chHHHHHHHHHHHHHHHHHH
Confidence 888887631 67789888777776655543
No 150
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.55 E-value=0.001 Score=74.71 Aligned_cols=134 Identities=18% Similarity=0.247 Sum_probs=92.0
Q ss_pred HHhcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCC-cchhHHHHHHHHh
Q 046386 416 QSLGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGN-AVALQAGTSLIGL 492 (609)
Q Consensus 416 ~al~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~~l~~~s~liG~ 492 (609)
+.++.+. .+...++.+..+.+..=+++| ++|.. ++.+| .+.+..+++.+++++.....+ +..+++.-++.|+
T Consensus 43 ~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~---~G~r~--~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~i 117 (489)
T PRK10207 43 KQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHL---LGTKR--TIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAV 117 (489)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhc---cchHH--HHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHh
Confidence 3455533 244566667767776666677 56641 33223 444445566666665542222 3345677888999
Q ss_pred hhcchhhhHHHHHHHhhCCCC--chhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHH
Q 046386 493 SSGFIFAAAVSITSELFGPNS--VGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTF 570 (609)
Q Consensus 493 ~yG~~f~~~P~i~se~FG~k~--fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF 570 (609)
+.|...+..+++++|.|-.++ -+.-|++...+..+|+.+++.+.|.+-|.. .+|..|
T Consensus 118 g~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~---------------------gw~~~F 176 (489)
T PRK10207 118 GNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKF---------------------GYSVTY 176 (489)
T ss_pred ccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhh---------------------ChHHHH
Confidence 999999999999999997653 366788888999999999999999987654 389999
Q ss_pred HHHHH
Q 046386 571 VLWGC 575 (609)
Q Consensus 571 ~i~a~ 575 (609)
.+.++
T Consensus 177 ~i~~i 181 (489)
T PRK10207 177 NLCGA 181 (489)
T ss_pred HHHHH
Confidence 88544
No 151
>PRK12382 putative transporter; Provisional
Probab=97.54 E-value=0.00073 Score=72.56 Aligned_cols=153 Identities=13% Similarity=0.047 Sum_probs=98.5
Q ss_pred HhhhHHHHHHHHHHHhhccccc-eeecchh-HHHHHhcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHH
Q 046386 384 LVLRLDFWLYYIAYFCGGAIGL-VYSNNLG-QIAQSLGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGW 459 (609)
Q Consensus 384 ~l~~~~Fwll~~~~~~g~g~Gl-m~I~n~g-~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~ 459 (609)
...+.++|.+++..++.. .+. +...-+. .+.++++.+. .....+++..+...++++..| ++|. ++++|.
T Consensus 11 ~~~~~~~~~~~~~~~~~~-~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr----~g~r~~-- 83 (392)
T PRK12382 11 SSANFSLFRIAFAVFLTY-MTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQ----YGAKRS-- 83 (392)
T ss_pred CcccccHHHHHHHHHHHH-HHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHh----hcchHH--
Confidence 345667777766665532 222 2222222 2455666533 356678888888888888888 4555 443333
Q ss_pred HHHHHHHHHHHH---HHHHhc-----CCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHH
Q 046386 460 LTIALLPTPVAF---CLLATS-----GNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLV 531 (609)
Q Consensus 460 l~~~~~~~~~~~---ll~~~~-----~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~ 531 (609)
+.+..+...++. .+.... .+...+++.-.+.|++.|.......+.+.|++..|+.++..|+..++..+|..+
T Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~ 163 (392)
T PRK12382 84 ALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAA 163 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHH
Confidence 222222222221 111111 123446777889999999888888889999999999999999998888888888
Q ss_pred HHHHHHHHhhcc
Q 046386 532 YGFLAAIVYDSN 543 (609)
Q Consensus 532 ~~~i~g~iyD~~ 543 (609)
++.+.+.+++..
T Consensus 164 g~~~~~~l~~~~ 175 (392)
T PRK12382 164 GAPLGLLLHSHF 175 (392)
T ss_pred HHHHHHHHHhcc
Confidence 888888888653
No 152
>PTZ00207 hypothetical protein; Provisional
Probab=97.53 E-value=0.00076 Score=77.24 Aligned_cols=166 Identities=17% Similarity=0.223 Sum_probs=100.2
Q ss_pred HHHHHHHhhccccceeecch--hHHHHHhcCCcccchhhHHHHHhhhhh--hhhccchhhhhhhcccchhHHHHHHHHHH
Q 046386 392 LYYIAYFCGGAIGLVYSNNL--GQIAQSLGESSRTTTLLTLYSSFSFFG--RLLSAAPDYMRAKVYFARTGWLTIALLPT 467 (609)
Q Consensus 392 ll~~~~~~g~g~Glm~I~n~--g~I~~al~~~~~~~~~VSl~Si~n~~G--Rl~~g~SD~l~~~~~~~R~~~l~~~~~~~ 467 (609)
.+...+++....|.++.-|+ .++.++++.+..+-.. +.++....| -+.+| ++.+|++ +|. .+.+..++.
T Consensus 29 ~lva~~~~~~~~g~~y~fsv~s~~L~~~lgls~~~l~~--i~svg~~~g~~~lp~G---~L~Dr~G-~R~-vllig~ll~ 101 (591)
T PTZ00207 29 LLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLST--ITTVGIAVGYFLLPYS---FIYDYLG-PRP-IFVLSMTVF 101 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHH--HHHHHHHHHHHHHHHH---HHHHHhC-cHH-HHHHHHHHH
Confidence 34444444444556555444 5666666664332111 222222222 22345 4444444 233 444455556
Q ss_pred HHHHHHHHhc------CCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhh
Q 046386 468 PVAFCLLATS------GNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYD 541 (609)
Q Consensus 468 ~~~~ll~~~~------~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD 541 (609)
.++.++.+.. ++...+++.-++.|++-|..+......+.++|- ++-|.-.|+..+..++|+.+++.+...++.
T Consensus 102 ~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~ 180 (591)
T PTZ00207 102 CLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS 180 (591)
T ss_pred HHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666655422 344556777888899888888888899999995 788999999999999999887766655554
Q ss_pred ccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHH
Q 046386 542 SNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLL 587 (609)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l 587 (609)
. -.+..|++.+.+.++..++.+.+
T Consensus 181 ~----------------------~~~~~fl~l~vl~~vv~ll~~~~ 204 (591)
T PTZ00207 181 D----------------------NTSAYFFFLMSFALVVGILAIVF 204 (591)
T ss_pred H----------------------hHHHHHHHHHHHHHHHHHHHHhh
Confidence 1 14567777777666655555444
No 153
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=97.52 E-value=0.00089 Score=82.41 Aligned_cols=162 Identities=14% Similarity=0.083 Sum_probs=102.9
Q ss_pred HHHhhhHHHHHHHHHHHhhccccceeecc-hhHHH-HHhcCCc--ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccch
Q 046386 382 RLLVLRLDFWLYYIAYFCGGAIGLVYSNN-LGQIA-QSLGESS--RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFAR 456 (609)
Q Consensus 382 ~~~l~~~~Fwll~~~~~~g~g~Glm~I~n-~g~I~-~al~~~~--~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R 456 (609)
++++++.+|+.+|+..+++. .|-.+..+ +..+. ..+..+. .....+++.....+++.++.+ +.-++.||++.+|
T Consensus 5 ~~l~~~~~f~~l~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~ 83 (1140)
T PRK06814 5 LYLMKSRRFAPLFWTQFFGA-FNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAK 83 (1140)
T ss_pred hhhhhccccHHHHHHHHHhH-HHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHH
Confidence 34788889999888887754 23211111 11111 1122111 123456666666666665543 3335556655444
Q ss_pred hHHH-HHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHH
Q 046386 457 TGWL-TIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFL 535 (609)
Q Consensus 457 ~~~l-~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i 535 (609)
.... ....++.....++....++...+++..++.|++.+..+...-+++.|+|..+..+...|++.++..+|..+++.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l 163 (1140)
T PRK06814 84 LAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTII 163 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHH
Confidence 3211 111111111111111134567789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccC
Q 046386 536 AAIVYDSNV 544 (609)
Q Consensus 536 ~g~iyD~~~ 544 (609)
+|.+.+..+
T Consensus 164 ~g~l~~~~~ 172 (1140)
T PRK06814 164 GGLATISGN 172 (1140)
T ss_pred HHHHHhccc
Confidence 999988543
No 154
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=97.50 E-value=0.0018 Score=71.54 Aligned_cols=138 Identities=9% Similarity=0.016 Sum_probs=90.9
Q ss_pred cchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhc----CCcchhHHHHHHHHhhhcchh
Q 046386 424 TTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATS----GNAVALQAGTSLIGLSSGFIF 498 (609)
Q Consensus 424 ~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~----~~~~~l~~~s~liG~~yG~~f 498 (609)
....++...+...++.+..| ++|+ ++.+| ++.+..++.+++.++.+.. .+...+++...+.|++.|..+
T Consensus 65 ~g~~~~~~~i~~~~~~~~~G~l~Dr----~g~k~--~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~ 138 (452)
T PRK11273 65 LGFALSGISIAYGFSKFIMGSVSDR----SNPRV--FLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGW 138 (452)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhc----cCCch--hHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccc
Confidence 44567888888888888888 4555 44333 3444444444444444311 123345666778899999988
Q ss_pred hhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHH-HHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHH
Q 046386 499 AAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAA-IVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVS 577 (609)
Q Consensus 499 ~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g-~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~ 577 (609)
+....++.|+|-.|+-|+..|+..++..+|+.+.+.+.+ .+...+ -+|.+|++.+.++
T Consensus 139 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~---------------------gw~~~f~i~~~~~ 197 (452)
T PRK11273 139 PPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFN---------------------DWHAALYMPAFAA 197 (452)
T ss_pred hHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhc---------------------cHHHHHHHHHHHH
Confidence 888888999999899999999988888887655443332 222211 2889999888777
Q ss_pred HHHHHHHHHHH
Q 046386 578 VVGLAASVLLF 588 (609)
Q Consensus 578 ~~~~~~sl~l~ 588 (609)
++..++.++..
T Consensus 198 ~~~~~l~~~~~ 208 (452)
T PRK11273 198 ILVALFAFAMM 208 (452)
T ss_pred HHHHHHHHHHc
Confidence 76655555544
No 155
>PRK11010 ampG muropeptide transporter; Validated
Probab=97.50 E-value=0.0012 Score=73.99 Aligned_cols=130 Identities=18% Similarity=0.153 Sum_probs=95.8
Q ss_pred hhhhhhcc-chhhhhh-hcccchhHHHHHHHHHHHHHHHHHHhcC---CcchhHHHHHHHHhhhcchhhhHHHHHHHhhC
Q 046386 436 FFGRLLSA-APDYMRA-KVYFARTGWLTIALLPTPVAFCLLATSG---NAVALQAGTSLIGLSSGFIFAAAVSITSELFG 510 (609)
Q Consensus 436 ~~GRl~~g-~SD~l~~-~~~~~R~~~l~~~~~~~~~~~ll~~~~~---~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG 510 (609)
.++++++| ++|.... |+++ |+.|+.+..+.++++...++... +...+.+...+.|++.+.+-....+++.|+|-
T Consensus 59 ~~~~~l~gpl~Dr~~~~~~Gr-rr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~ 137 (491)
T PRK11010 59 YVFKFLWSPLMDRYTPPFLGR-RRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLP 137 (491)
T ss_pred HHHHHHHHHHHHcccccCCCC-chHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 36888888 7887532 3343 34466666666655554443221 22346667888999999999999999999999
Q ss_pred CCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHH
Q 046386 511 PNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVL 586 (609)
Q Consensus 511 ~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~ 586 (609)
.|+.|..-++...+..+|..+++.+.+.+.|... ..|.+|.+.+.+++++.+..+.
T Consensus 138 ~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~--------------------GWr~~f~i~a~l~ll~~l~~~~ 193 (491)
T PRK11010 138 AEERGAGAAISVLGYRLAMLVSGGLALWLADRYL--------------------GWQGMYWLMAALLIPCIIATLL 193 (491)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--------------------CHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999888888887321 3899999988877776555443
No 156
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=97.42 E-value=0.0022 Score=69.71 Aligned_cols=175 Identities=21% Similarity=0.220 Sum_probs=135.4
Q ss_pred HHHHHHHHHHhhccccceeecchhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHH
Q 046386 389 DFWLYYIAYFCGGAIGLVYSNNLGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPT 467 (609)
Q Consensus 389 ~Fwll~~~~~~g~g~Glm~I~n~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~ 467 (609)
.-|.+.++.|+-.....+...=+.+|+++++.+. .+...||+++..-.+|=++.. .+.+|+ +|+..+...+++.
T Consensus 14 ~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~---~lt~r~--~Rr~lLl~~l~lF 88 (394)
T COG2814 14 ALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLA---LLTGRL--ERRRLLLGLLALF 88 (394)
T ss_pred HHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH---HHHccc--chHHHHHHHHHHH
Confidence 3455555555555567788889999999998843 456799999998888887765 333333 4444556666677
Q ss_pred HHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCC
Q 046386 468 PVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSG 547 (609)
Q Consensus 468 ~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~ 547 (609)
.++.++.+..++-..+.++=.+.|++-|..|++.-++.+++=..++-+.-=++++++..++-.++.-+...+=|.-+
T Consensus 89 i~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~G--- 165 (394)
T COG2814 89 IVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFG--- 165 (394)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhh---
Confidence 77777776567777888889999999999999999999999999999999999999998888888666666666554
Q ss_pred CCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHH
Q 046386 548 IGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLLFL 589 (609)
Q Consensus 548 ~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l~~ 589 (609)
-|.+|.+.+++++++++......=
T Consensus 166 ------------------WR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 166 ------------------WRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred ------------------HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 899999999988777666555443
No 157
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=97.41 E-value=0.0014 Score=71.10 Aligned_cols=152 Identities=14% Similarity=0.087 Sum_probs=96.9
Q ss_pred hhHHHHHHHHHHHhhccccceeecchhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHH
Q 046386 386 LRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIAL 464 (609)
Q Consensus 386 ~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~ 464 (609)
++...|.+...+.+..+.+. ..+-..++.++++.+. +....++.+.+...++.+..| .+.||++++|. +....
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g---~l~dr~g~k~~--l~~~~ 85 (402)
T TIGR00897 12 PLNLLWGYIGVVVFMTGDGL-EQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISG---VVAEIIGPLKT--MMIGL 85 (402)
T ss_pred CchhhHHHHHHHHHHHhhhh-HHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHH---HHHHHcCcHHH--HHHHH
Confidence 33344444444444444442 3334566667776643 455677888888888888888 44445544443 33333
Q ss_pred HHHHHHHHHH---Hh-cCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHH-HHHHHHHHHH
Q 046386 465 LPTPVAFCLL---AT-SGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGS-LVYGFLAAIV 539 (609)
Q Consensus 465 ~~~~~~~ll~---~~-~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs-~~~~~i~g~i 539 (609)
++..++.++. .. .++...+++...+.|++++.......+.+.+.+..|+-++.-|+..++..+|. .+++.+.|.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l 165 (402)
T TIGR00897 86 LLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYA 165 (402)
T ss_pred HHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3334433322 11 12345566677788998887777777788899999999999999988888886 4667788888
Q ss_pred hhcc
Q 046386 540 YDSN 543 (609)
Q Consensus 540 yD~~ 543 (609)
+|..
T Consensus 166 ~~~~ 169 (402)
T TIGR00897 166 IPAF 169 (402)
T ss_pred cccc
Confidence 8754
No 158
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=97.39 E-value=0.0028 Score=70.72 Aligned_cols=158 Identities=17% Similarity=0.084 Sum_probs=89.1
Q ss_pred hHHHHHhcCCcc-cchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHH
Q 046386 412 GQIAQSLGESSR-TTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLI 490 (609)
Q Consensus 412 g~I~~al~~~~~-~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~li 490 (609)
..+.++++.+.. .....+...+...+|.+..| ++.+|+++++ .+.+..++.+++.++....++...+++.-.+.
T Consensus 60 ~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G---~l~dr~G~r~--~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~ 134 (476)
T PLN00028 60 PIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMG---PVCDLYGPRY--GSAFLLMLTAPAVFCMSLVSSATGFIAVRFFI 134 (476)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhCChH--HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 345555665332 22344455555667777777 4444444322 33333444445544444344556666777888
Q ss_pred HhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHH
Q 046386 491 GLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTF 570 (609)
Q Consensus 491 G~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF 570 (609)
|++.|... .....++|+|-.|+-|.-.|+......+|+.+++.+.+.+.+.-... .|.+..-+|.+|
T Consensus 135 G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~------------~~~~~~gWr~~f 201 (476)
T PLN00028 135 GFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDA------------GAPSFTAWRIAF 201 (476)
T ss_pred HHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------------CCcchhhhHHHH
Confidence 98887643 34567899998889999888875444455544443333332211000 000111389999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 046386 571 VLWGCVSVVGLAASVLL 587 (609)
Q Consensus 571 ~i~a~~~~~~~~~sl~l 587 (609)
.+.++++++..++.+++
T Consensus 202 ~i~g~l~l~~~l~~~~~ 218 (476)
T PLN00028 202 FVPGLLHIIMGILVLTL 218 (476)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99888877665555443
No 159
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=97.37 E-value=0.0019 Score=68.26 Aligned_cols=147 Identities=12% Similarity=-0.037 Sum_probs=89.3
Q ss_pred HHHhcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhh
Q 046386 415 AQSLGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLS 493 (609)
Q Consensus 415 ~~al~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~ 493 (609)
.++++.+. ......++..+...+.....| ++.||++.+|. ++....+...++.++.+..++...+++...+.|..
T Consensus 25 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g---~l~Dr~g~r~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 100 (375)
T TIGR00899 25 SEEVRARPAMIGLFYTGSAIVGIAVSQLLA---TRSDYQGDRKG-LILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSF 100 (375)
T ss_pred HcccCCCHHHHHHHHHHHHHHHHHHHHHHH---HHHhccCCchH-HHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhh
Confidence 34455432 234566666667777777766 44455554444 33222333333333444334445556666677777
Q ss_pred hcchhhhHHHHHHHhhCCCCch--hhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHH
Q 046386 494 SGFIFAAAVSITSELFGPNSVG--VNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFV 571 (609)
Q Consensus 494 yG~~f~~~P~i~se~FG~k~fg--~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~ 571 (609)
.+.......+++.|....+.-+ ...|.+..+..+|..+++.+.|.+.|..+ +|..|.
T Consensus 101 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~---------------------~~~~f~ 159 (375)
T TIGR00899 101 ASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFG---------------------FTVMFL 159 (375)
T ss_pred hhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcc---------------------cHHHHH
Confidence 7777666667777877543322 23677767777888888888889987653 899999
Q ss_pred HHHHHHHHHHHHHHH
Q 046386 572 LWGCVSVVGLAASVL 586 (609)
Q Consensus 572 i~a~~~~~~~~~sl~ 586 (609)
+.+..+++..++.+.
T Consensus 160 ~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 160 TAALAFVLCGVLVWL 174 (375)
T ss_pred HHHHHHHHHHHHHHH
Confidence 988776666555544
No 160
>PRK03633 putative MFS family transporter protein; Provisional
Probab=97.35 E-value=0.00094 Score=71.67 Aligned_cols=151 Identities=13% Similarity=0.054 Sum_probs=99.1
Q ss_pred hhHHHHHHHHHHHhhccccceee-cchhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHH
Q 046386 386 LRLDFWLYYIAYFCGGAIGLVYS-NNLGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIA 463 (609)
Q Consensus 386 ~~~~Fwll~~~~~~g~g~Glm~I-~n~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~ 463 (609)
.++++|++++..++.. .+...+ ..+.++.++++.+. +.....+...+.+.++.+..| ++.||++.+| .+.+.
T Consensus 4 ~~~~~~~~~~~~~~~~-~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g---~l~dr~g~k~--~~~~~ 77 (381)
T PRK03633 4 YTRPVLLLLCGLLLLT-LAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAG---YVIKRIGFNR--SYYLA 77 (381)
T ss_pred HHHHHHHHHHHHHHHH-HhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHH---HHHHHHHHHH--HHHHH
Confidence 3567888887776533 444444 34555666665532 344566666766777777777 4444444333 33333
Q ss_pred HHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhc
Q 046386 464 LLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDS 542 (609)
Q Consensus 464 ~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~ 542 (609)
.++..++.++....++...+.+.-.+.|++.|..+....+.+.+.+-.++-+...|....+..+|..+++.+.+.+.+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 78 SLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 3444445444443455666778888999999998888878888888778889999988787888888887777776553
No 161
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.32 E-value=0.0025 Score=71.66 Aligned_cols=138 Identities=15% Similarity=0.215 Sum_probs=90.2
Q ss_pred hcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcC-CcchhHHHHHHHHhhh
Q 046386 418 LGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSG-NAVALQAGTSLIGLSS 494 (609)
Q Consensus 418 l~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~-~~~~l~~~s~liG~~y 494 (609)
++.+. .+....+.+.+...++-+..| ++|.+. +.+| .+.+..+++.++++++...+ .+..+++...+++++.
T Consensus 40 lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRil---Grrr--~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~ 114 (493)
T PRK15462 40 LKYDDNHAYELFSAYCSLVYVTPILGGFLADKVL---GNRM--AVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGY 114 (493)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---CcHH--HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhc
Confidence 45533 344567788888888888888 455541 3333 33444455666665554222 2234566666777888
Q ss_pred cchhhhHHHHHHHhhCCC--CchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHH
Q 046386 495 GFIFAAAVSITSELFGPN--SVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVL 572 (609)
Q Consensus 495 G~~f~~~P~i~se~FG~k--~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i 572 (609)
|...+..+++++|.|..+ .-++-+++......+|+.+.+.+.|.+-+.. .|+..|.+
T Consensus 115 G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~---------------------Gw~~~F~i 173 (493)
T PRK15462 115 GLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY---------------------SWAMGFGL 173 (493)
T ss_pred ccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh---------------------ChHHHHHH
Confidence 888898999999999865 3455566666666678888898888887654 38999987
Q ss_pred HHHHHHHHH
Q 046386 573 WGCVSVVGL 581 (609)
Q Consensus 573 ~a~~~~~~~ 581 (609)
.+...++++
T Consensus 174 aaigm~l~l 182 (493)
T PRK15462 174 AAVGMIAGL 182 (493)
T ss_pred HHHHHHHHH
Confidence 654433333
No 162
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.29 E-value=0.0029 Score=69.36 Aligned_cols=148 Identities=15% Similarity=0.183 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHhcCCccccccccHHHHHHhCCChhh--------hhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHH
Q 046386 39 WMILVATIWIQAFTGTNFDFSAYSSDLKSVLGVSQVQ--------LNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMA 109 (609)
Q Consensus 39 w~~lvas~~v~l~~Gt~Y~fs~YS~~lk~~L~~sq~q--------ln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig 109 (609)
|..+++.++++......| .|.+..-++.|+++.+ .-.+-....++. ...++.|.+.|...+..++.++
T Consensus 211 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~ 287 (418)
T TIGR00889 211 AIFFFFSMLLGAPLQITN---IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLS 287 (418)
T ss_pred eeHHHHHHHHHhHHHHHH---HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 555566666555444444 4445555567777532 222222222222 3346668888888777666776
Q ss_pred HHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhh-hhhhhhHHHHHHHH
Q 046386 110 AFMGFFGYGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTV-SFNGVSAAIYALAG 187 (609)
Q Consensus 110 ~~~~~~GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k-~~~GLSaaI~s~i~ 187 (609)
.++..+++.+.-. ........+.+....++.|.+.+..+.+...-..+.+| +.||.+.|+.- ...++++++...+.
T Consensus 288 ~~~~~v~~~l~~~--~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~ 365 (418)
T TIGR00889 288 LVAWALRFGFFAY--GDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILS 365 (418)
T ss_pred HHHHHHHHHHHHH--cCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 6655555433311 11111112334444566666666666666666789999 66999999995 67788887777776
Q ss_pred hhhC
Q 046386 188 NAIN 191 (609)
Q Consensus 188 ~~~f 191 (609)
-.++
T Consensus 366 G~l~ 369 (418)
T TIGR00889 366 GVMV 369 (418)
T ss_pred HHHH
Confidence 6554
No 163
>TIGR00901 2A0125 AmpG-related permease.
Probab=97.28 E-value=0.003 Score=66.79 Aligned_cols=160 Identities=17% Similarity=0.104 Sum_probs=101.0
Q ss_pred hHHHHHhcCCcccchhhHHHHHhhhhhhhhcc-chhhhh-hhcccchhHHHHHHHHHHHHHHHHHHhcC---CcchhHHH
Q 046386 412 GQIAQSLGESSRTTTLLTLYSSFSFFGRLLSA-APDYMR-AKVYFARTGWLTIALLPTPVAFCLLATSG---NAVALQAG 486 (609)
Q Consensus 412 g~I~~al~~~~~~~~~VSl~Si~n~~GRl~~g-~SD~l~-~~~~~~R~~~l~~~~~~~~~~~ll~~~~~---~~~~l~~~ 486 (609)
..+.++.|.+..+....+...+... .++++| ++|... +|.+++|+ |+....+++++..+.+.... +...++..
T Consensus 12 ~~~~~~~g~s~~~~g~~~~~~~~~~-~~~~~g~~~Dr~~~~~~Grr~~-~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~ 89 (356)
T TIGR00901 12 PYWLRSKNVSLKTIGFFSLVGLPYS-LKFLWSPLVDTVYLPFFGRRRS-WLVLTQVLLLSLLLILSFLVPSTDLPLLAGL 89 (356)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHH-HHHHHHHHHhcccCCCCCccHH-HHHHHHHHHHHHHHHHHcCCcchhHHHHHHH
Confidence 3445555553332222222222233 277777 678763 33454444 44454545554443333221 12234555
Q ss_pred HHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCccccccccc
Q 046386 487 TSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCY 566 (609)
Q Consensus 487 s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy 566 (609)
..+.+++++......-+++.|++..|+-+..-|+...+..+|..+++.+++.+++..+..+ .....+
T Consensus 90 ~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~-------------~~~~~w 156 (356)
T TIGR00901 90 AFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANT-------------GLITLW 156 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccc-------------cccccc
Confidence 6677888888888889999999999999999999999999999999989888886654211 124479
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 046386 567 FLTFVLWGCVSVVGLAASVL 586 (609)
Q Consensus 567 ~~tF~i~a~~~~~~~~~sl~ 586 (609)
|.+|.+.+...++++++.++
T Consensus 157 r~~f~i~ai~~l~~~~~~~~ 176 (356)
T TIGR00901 157 GYIFFWTALLILPGLLVTLF 176 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99998888776665554443
No 164
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=97.28 E-value=0.0025 Score=67.45 Aligned_cols=142 Identities=18% Similarity=0.184 Sum_probs=95.1
Q ss_pred HHHHHhcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHH
Q 046386 413 QIAQSLGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIG 491 (609)
Q Consensus 413 ~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG 491 (609)
++.++++.+. ......++..+...++.+..| ++.||++.+|. +.+..+...++.++. ..++...+.+...+.|
T Consensus 25 ~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g---~l~dr~g~r~~--~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g 98 (355)
T TIGR00896 25 QIRSALGMSFSVAGLLTALPVLCFAVLAPLAP---WLARRFGEERS--VAAGLLLIAAGILIR-SAPGTALLFAGTALIG 98 (355)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHH---HHHHHhCchHH--HHHHHHHHHHHHHHH-HhccHHHHHHHHHHHH
Confidence 4555665532 345566777777777777777 44445543333 333333333433333 2455566777788899
Q ss_pred hhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHH
Q 046386 492 LSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFV 571 (609)
Q Consensus 492 ~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~ 571 (609)
++.|...+..|.++.|.|. ++-+...|+...+..+|..+++.+.+.+.|.... -+|..|.
T Consensus 99 ~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~-------------------~w~~~f~ 158 (355)
T TIGR00896 99 VGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGG-------------------HWQQALA 158 (355)
T ss_pred HHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-------------------hHHHHHH
Confidence 9999999999999999995 7888899998888888888888888877664320 2778887
Q ss_pred HHHHHHHHH
Q 046386 572 LWGCVSVVG 580 (609)
Q Consensus 572 i~a~~~~~~ 580 (609)
+.+++++++
T Consensus 159 ~~~~~~~~~ 167 (355)
T TIGR00896 159 WWALPALLA 167 (355)
T ss_pred HHHHHHHHH
Confidence 776654443
No 165
>TIGR00898 2A0119 cation transport protein.
Probab=97.28 E-value=0.0022 Score=71.40 Aligned_cols=131 Identities=16% Similarity=0.135 Sum_probs=94.1
Q ss_pred cchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHH
Q 046386 424 TTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAV 502 (609)
Q Consensus 424 ~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P 502 (609)
.....+++.+...+|.++.| ++|. ++++ ..+.+..++..++.++.+..++...+.+.-.+.|++.|+.+.+..
T Consensus 129 ~~~~~s~~~~g~~~g~~~~g~l~Dr----~Grr--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 202 (505)
T TIGR00898 129 VDLTQSCFFVGVLLGSFVFGYLSDR----FGRK--KVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAV 202 (505)
T ss_pred HHHHHHHHHHHHHHHHHhHHHhhhh----ccch--HHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHH
Confidence 34566777777777777777 4554 4432 234444444555555544455567788889999999999999999
Q ss_pred HHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHH
Q 046386 503 SITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLA 582 (609)
Q Consensus 503 ~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~ 582 (609)
++++|++..|+-+..-++...+..+|..+.+.+++.+.| +|..|.+.+..+++..+
T Consensus 203 ~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~------------------------wr~~~~~~~i~~~~~~~ 258 (505)
T TIGR00898 203 VLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD------------------------WRWLQLAVSLPTFLFFL 258 (505)
T ss_pred HHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH------------------------HHHHHHHHHHHHHHHHH
Confidence 999999999999988888888888888877776654421 67888888777666655
Q ss_pred HH
Q 046386 583 AS 584 (609)
Q Consensus 583 ~s 584 (609)
..
T Consensus 259 ~~ 260 (505)
T TIGR00898 259 LS 260 (505)
T ss_pred HH
Confidence 54
No 166
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=97.25 E-value=0.0019 Score=71.31 Aligned_cols=138 Identities=14% Similarity=0.170 Sum_probs=95.5
Q ss_pred chhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHH--HhcCCcchhHHHHHHHHhhhcchhhhHH
Q 046386 425 TTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLL--ATSGNAVALQAGTSLIGLSSGFIFAAAV 502 (609)
Q Consensus 425 ~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~--~~~~~~~~l~~~s~liG~~yG~~f~~~P 502 (609)
....+.+.+...++.+..| ++.||++.+| .+....++.+++.++. +.......+++.-.+.|++.|..+...+
T Consensus 79 g~~~s~~~~~~~~~~~~~g---~l~dr~g~r~--~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~ 153 (465)
T TIGR00894 79 GLILSSHFYGQIIIQIPVG---YLAGKYVFKW--SIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATH 153 (465)
T ss_pred hHHHHHHHHHHHHHHcchH---HHHHHhCcch--hhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHH
Confidence 3455555655666666666 4555554333 2333333333333332 2122334577778899999999999999
Q ss_pred HHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHH
Q 046386 503 SITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLA 582 (609)
Q Consensus 503 ~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~ 582 (609)
.+++|+|..|+-|+-.|+...+..+|..+++.+.+.+.|... -+|.+|++.+..+++..+
T Consensus 154 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~--------------------gw~~~f~i~~~~~~~~~~ 213 (465)
T TIGR00894 154 KIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWG--------------------GWPMIFYVFGIVGCAWSL 213 (465)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--------------------CCCeehhhhhHHHHHHHH
Confidence 999999999999999999999999999999999999987631 278889888777665554
Q ss_pred HHHHH
Q 046386 583 ASVLL 587 (609)
Q Consensus 583 ~sl~l 587 (609)
+...+
T Consensus 214 ~~~~~ 218 (465)
T TIGR00894 214 LWFVF 218 (465)
T ss_pred HHHHH
Confidence 44443
No 167
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.24 E-value=0.24 Score=55.65 Aligned_cols=93 Identities=13% Similarity=0.145 Sum_probs=69.5
Q ss_pred chhHHHHHHHHhhhcchhhhHHHHHHHhhC--CCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCc
Q 046386 481 VALQAGTSLIGLSSGFIFAAAVSITSELFG--PNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSV 558 (609)
Q Consensus 481 ~~l~~~s~liG~~yG~~f~~~P~i~se~FG--~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~ 558 (609)
....+..+++|+++....++=-+++++.=- .+++|..-|+..++..++-.+-++..|.+.+..+.+
T Consensus 381 ~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~------------ 448 (477)
T TIGR01301 381 ASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGG------------ 448 (477)
T ss_pred HHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCC------------
Confidence 456777899999999999999999999776 478899999998888888888777777755444311
Q ss_pred ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046386 559 VCMGRHCYFLTFVLWGCVSVVGLAASVLLFLRTR 592 (609)
Q Consensus 559 ~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l~~r~r 592 (609)
-..+|.+.++..+++.++++++.=|.+
T Consensus 449 -------~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 449 -------NLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred -------CeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 345666677777777777776654443
No 168
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=97.22 E-value=0.0055 Score=68.35 Aligned_cols=185 Identities=13% Similarity=0.051 Sum_probs=111.2
Q ss_pred hhhHHHHHHHHHHHhhccccceeecchhHHH----H-HhcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhcccchhH
Q 046386 385 VLRLDFWLYYIAYFCGGAIGLVYSNNLGQIA----Q-SLGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTG 458 (609)
Q Consensus 385 l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~----~-al~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~ 458 (609)
+..+.+|+-++.++++- +.=...+.++ + +++.+. +....+++..+...++|+..| ++.||++.+|.
T Consensus 31 ~a~r~l~~s~~~f~~~F----~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G---~l~Dr~G~R~v- 102 (462)
T PRK15034 31 IARRNLWISVSCLLLAF----CVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYS---FMVPIFGGRRW- 102 (462)
T ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhCChHH-
Confidence 44557887777765532 2222233322 2 344432 345678888888999999988 55566664333
Q ss_pred HHHHHHHHHHHHHHHHHhc-----CCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHH----hhhhhHH
Q 046386 459 WLTIALLPTPVAFCLLATS-----GNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILI----TNIPIGS 529 (609)
Q Consensus 459 ~l~~~~~~~~~~~ll~~~~-----~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~----~a~~~gs 529 (609)
+.+..++.++..++.... ++...+++.-.+.|++ |+.|...-..++++|-.|+.|+..|+.. .+..++.
T Consensus 103 -~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~ 180 (462)
T PRK15034 103 -TVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQ 180 (462)
T ss_pred -HHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHH
Confidence 233333334443333311 4456788889999998 9999999999999999888999999884 4444445
Q ss_pred HHHHHHH-HHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHH
Q 046386 530 LVYGFLA-AIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLL 587 (609)
Q Consensus 530 ~~~~~i~-g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l 587 (609)
++.+.+. ..+++..+...... .. -+..-.|.++.+.+.+.+++.++.+++
T Consensus 181 ~l~p~~i~~~l~~~~G~~~~~~-----~~---g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 181 LVAPLVIFVPVFAFLGVNGVPQ-----AD---GSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred HHHHHHHHHHHHHHhccccccc-----cc---cchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5555433 23444433211000 00 012247788888888777776666654
No 169
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=97.21 E-value=0.008 Score=66.21 Aligned_cols=141 Identities=14% Similarity=-0.001 Sum_probs=88.9
Q ss_pred chhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHh---------cCC---cchhHHHHHHHH
Q 046386 425 TTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLAT---------SGN---AVALQAGTSLIG 491 (609)
Q Consensus 425 ~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~---------~~~---~~~l~~~s~liG 491 (609)
...++++.+...+|-+++| ++|+ ++++|. +.+..+++.++.++.+. .++ ...+.+.-.+.|
T Consensus 58 ~~~~s~~~ig~~~~~~~~G~l~dr----~Grr~~--~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G 131 (479)
T PRK10077 58 GFCVASALIGCIIGGALGGYCSNR----FGRRDS--LKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGG 131 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----hccHHH--HHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHh
Confidence 4466677777777777777 4555 443333 33333344444333221 011 133566778999
Q ss_pred hhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHH
Q 046386 492 LSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFV 571 (609)
Q Consensus 492 ~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~ 571 (609)
++.|+.+...+++++|++..|+-|..-|+..++..+|..+.+.+.+.+.+...... . +..-+|..|.
T Consensus 132 ~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~------------~-~~~gWr~~f~ 198 (479)
T PRK10077 132 IGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASW------------L-NTDGWRYMFA 198 (479)
T ss_pred hhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccc------------c-ccCChHHHHH
Confidence 99999999999999999999999999999888888888776555444432211000 0 1114899998
Q ss_pred HHHHHHHHHHHHH
Q 046386 572 LWGCVSVVGLAAS 584 (609)
Q Consensus 572 i~a~~~~~~~~~s 584 (609)
+.+...++..++.
T Consensus 199 ~~~~~~~~~~~~~ 211 (479)
T PRK10077 199 SEAIPALLFLMLL 211 (479)
T ss_pred HHHHHHHHHHHHH
Confidence 8776666554443
No 170
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.15 E-value=5.4e-07 Score=98.54 Aligned_cols=112 Identities=18% Similarity=0.169 Sum_probs=73.0
Q ss_pred ChhhhhHHHHhhhcccchh-hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhh
Q 046386 72 SQVQLNYLATASDLGKLFG-WLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYILVFFLCLLSGLSITWFN 150 (609)
Q Consensus 72 sq~qln~I~~a~~lG~~~G-~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~ 150 (609)
++.+...+..+..+|..+| ++.|.+.|...+...+.++.++..+|-.+....... ..++.++..-++.|.|.+...
T Consensus 44 ~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~R~~~G~~~g~~~ 120 (451)
T PF00083_consen 44 SSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSY---NNFWMLLIGRFLIGFGIGGAY 120 (451)
T ss_pred hHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccc
Confidence 4456677888888888655 455889999988877777666665555443222111 134555555577777766666
Q ss_pred hHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHH
Q 046386 151 TVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALA 186 (609)
Q Consensus 151 taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i 186 (609)
+.+.+-..+.=| ++||...++.-.++.++..+-..+
T Consensus 121 ~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~ 157 (451)
T PF00083_consen 121 VVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLI 157 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccc
Confidence 666666667766 789999988888776665543333
No 171
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.13 E-value=0.013 Score=63.48 Aligned_cols=55 Identities=16% Similarity=0.346 Sum_probs=45.7
Q ss_pred hHHHHHHHHHhhcchhhhhhHHHHHHHHhcCCC--CcchhhhhhhhhhhhHHHHHHH
Q 046386 132 YILVFFLCLLSGLSITWFNTVCFVLCIQNFPAN--RALALSLTVSFNGVSAAIYALA 186 (609)
Q Consensus 132 ~~~l~~~~~l~G~g~~~~~taalvT~~kNFP~~--RG~avgl~k~~~GLSaaI~s~i 186 (609)
|+.+++.=.+.|.|.++++|+.+.-.++-||++ ||.|+|+..++.+|.=.+--.+
T Consensus 159 y~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpf 215 (464)
T KOG3764|consen 159 YPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPF 215 (464)
T ss_pred hHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCc
Confidence 666656668899999999999999999999954 6999999999999876654333
No 172
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=97.13 E-value=0.0052 Score=68.79 Aligned_cols=109 Identities=19% Similarity=0.103 Sum_probs=76.0
Q ss_pred chhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCC------cchhHHHHHHHHhhhcch
Q 046386 425 TTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGN------AVALQAGTSLIGLSSGFI 497 (609)
Q Consensus 425 ~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~------~~~l~~~s~liG~~yG~~ 497 (609)
....+...+...+|.+..| ++|++ + |...+.+..++..++.++.+..++ ...+.+.-.+.|++.|+.
T Consensus 59 ~~~~~~~~ig~~ig~~~~g~l~d~~----G--rr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~ 132 (502)
T TIGR00887 59 AAVNGSASIGTLAGQLFFGWLADKL----G--RKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGD 132 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh----c--cHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhh
Confidence 3456666666777777777 45554 3 222333333344444433332222 235777888999999999
Q ss_pred hhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHH
Q 046386 498 FAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIV 539 (609)
Q Consensus 498 f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~i 539 (609)
++..|++++|.|..|+-|...++......+|..+++.+...+
T Consensus 133 ~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~ 174 (502)
T TIGR00887 133 YPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIV 174 (502)
T ss_pred hHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998889888877666544
No 173
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=97.11 E-value=0.0046 Score=66.75 Aligned_cols=148 Identities=16% Similarity=0.100 Sum_probs=97.9
Q ss_pred hHHHHHhcCCcc-cchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHH
Q 046386 412 GQIAQSLGESSR-TTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSL 489 (609)
Q Consensus 412 g~I~~al~~~~~-~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~l 489 (609)
.++.++++.+.. .....|.+.+...++.+..| ++|++ + +|. .+...++....+.......++...+.+.=.+
T Consensus 15 p~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~----g-rr~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l 88 (368)
T TIGR00903 15 SLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA----F-KRW-FLFGSLATFAAAAGRLLDPFNYEWLLACQLL 88 (368)
T ss_pred HHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----c-chH-HHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 355566655332 34566777777788888888 45554 4 222 2222222222222222212345677888888
Q ss_pred HHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHH
Q 046386 490 IGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLT 569 (609)
Q Consensus 490 iG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~t 569 (609)
.|++.|...... +.++|.|-.|+-++.-++..++.++|..+.+.+.+.+-+.. -.|..
T Consensus 89 ~G~g~~~~~~~~-~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~---------------------gWr~~ 146 (368)
T TIGR00903 89 AALGQPFLLNAF-APAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG---------------------GLQLL 146 (368)
T ss_pred HHhHhHHHHHHH-HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---------------------chHHH
Confidence 999998754444 44589998999999999999999999999988888887643 28999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 046386 570 FVLWGCVSVVGLAASVLL 587 (609)
Q Consensus 570 F~i~a~~~~~~~~~sl~l 587 (609)
|++.+.++++..++..+.
T Consensus 147 f~~~~~l~~~~~~~~~~~ 164 (368)
T TIGR00903 147 IIPIAAVAAAGIILVLAA 164 (368)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999888877765554443
No 174
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=97.05 E-value=0.01 Score=66.40 Aligned_cols=135 Identities=18% Similarity=0.113 Sum_probs=72.9
Q ss_pred cCCccccccccHHH-HHHhCCChhhhhHHHHhhhcccchh-hhhhhhhhhhhHHHHHHHHHHHH-HHHHHHHHHHHhhcC
Q 046386 52 TGTNFDFSAYSSDL-KSVLGVSQVQLNYLATASDLGKLFG-WLSGLALMYFPLWVVLFMAAFMG-FFGYGLQWLVISHVI 128 (609)
Q Consensus 52 ~Gt~Y~fs~YS~~l-k~~L~~sq~qln~I~~a~~lG~~~G-~~sGll~~~~P~~~vllig~~~~-~~GY~~~~l~~~~~~ 128 (609)
....|.+..|.|.+ ++.+|++..+...+.....+|..+| .+.|.+.|...+..++.++++.. ..++........+
T Consensus 263 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~-- 340 (490)
T PRK10642 263 NVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSN-- 340 (490)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCC--
Confidence 34567777788885 4678999887666666666776544 34689999987665555655432 2233222222211
Q ss_pred cchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHhhh
Q 046386 129 SLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGNAI 190 (609)
Q Consensus 129 ~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~~~ 190 (609)
+ .+.+....++.|.+.+...........+.|| +.||+++|+.-...-+.+.+.+.+...+
T Consensus 341 ~--~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l 401 (490)
T PRK10642 341 V--IGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWL 401 (490)
T ss_pred C--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 2222222233332222222222233456899 5599988875554444455544444433
No 175
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=96.96 E-value=0.0062 Score=65.46 Aligned_cols=124 Identities=13% Similarity=0.057 Sum_probs=77.5
Q ss_pred HHHHhcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHH--H-hcC-----CcchhH
Q 046386 414 IAQSLGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLL--A-TSG-----NAVALQ 484 (609)
Q Consensus 414 I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~--~-~~~-----~~~~l~ 484 (609)
+.++++.+. ......++..+...++.+..| ++.||++++|.. ....++..++.+.. . ..+ +...++
T Consensus 42 i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G---~l~Dr~g~r~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 116 (399)
T PRK05122 42 VHDQLGFSAFLAGLVISLQYLATLLSRPHAG---RYADTLGPKKAV--VFGLCGCALSGLLYLLAGLLAAWPVLSLLLLL 116 (399)
T ss_pred HHHhcCccHHHHHHHHHHHHHHHHHhchhhH---hHHhccCCcchH--HHHHHHHHHHHHHHHHhhhhhccchhHHHHHH
Confidence 445555422 233445555555555555556 555666544443 33222332222211 1 111 112466
Q ss_pred HHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhc
Q 046386 485 AGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDS 542 (609)
Q Consensus 485 ~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~ 542 (609)
+.-.+.|++.|.......+.+.|.+..|+.++.-++...+..+|..+++.+.+.+.+.
T Consensus 117 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 174 (399)
T PRK05122 117 LGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHW 174 (399)
T ss_pred HHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHc
Confidence 7778999999999999999999999989999998887777777777788888888764
No 176
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=96.94 E-value=0.0015 Score=75.72 Aligned_cols=164 Identities=13% Similarity=0.103 Sum_probs=106.2
Q ss_pred HHHHHhcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcC-------------
Q 046386 413 QIAQSLGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLLATSG------------- 478 (609)
Q Consensus 413 ~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~------------- 478 (609)
+|-+..+.++ .....+|.+.+.+.++-+..+ ++.+|++ |++|+.+..++++++.++++..+
T Consensus 58 ~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~---~~~~r~~--r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~ 132 (633)
T TIGR00805 58 TIERRFKLSTSSSGLINGSYEIGNLLLIIFVS---YFGTKLH--RPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVS 132 (633)
T ss_pred hhhhhhCCCCCcceeeeehhhHHHHHHHHHHH---HhhcccC--cceEEEecHHHHHHHHHHHhChHHhcCCcccccccc
Confidence 4444445433 355788899999999988887 4555554 33455555566666666654110
Q ss_pred --------------------------------------CcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhH
Q 046386 479 --------------------------------------NAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNI 520 (609)
Q Consensus 479 --------------------------------------~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~ 520 (609)
....+.++-++.|++.|..+.+.++++.|.+..|+-+...|+
T Consensus 133 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i 212 (633)
T TIGR00805 133 STGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGI 212 (633)
T ss_pred ccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHH
Confidence 012356788999999999999999999999999999999999
Q ss_pred HHhhhhhHHHHHHHHHHHHhhccCCC---CCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHH
Q 046386 521 LITNIPIGSLVYGFLAAIVYDSNVSS---GIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAA 583 (609)
Q Consensus 521 ~~~a~~~gs~~~~~i~g~iyD~~~~~---~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~ 583 (609)
+.++..+|..++..+.|.+.+...+- +.+... -+...-.-....+..|++.+.+.++..+.
T Consensus 213 ~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~--l~~~dprWiGaWwl~Fli~g~l~~l~~v~ 276 (633)
T TIGR00805 213 LESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVI--LTPTDPRWIGAWWIGFLICGGVALLTSIP 276 (633)
T ss_pred HHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCC--CCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888877765432110 000000 00000000114677898888777665543
No 177
>PRK15011 sugar efflux transporter B; Provisional
Probab=96.94 E-value=0.011 Score=63.70 Aligned_cols=172 Identities=12% Similarity=0.040 Sum_probs=88.9
Q ss_pred hHHHHHHHHHHHhhccccce-eecchhH-HHHHhcCCcc-cchhhHHHHHh-hhhhhhhccchhhhhhhcccchhHHHHH
Q 046386 387 RLDFWLYYIAYFCGGAIGLV-YSNNLGQ-IAQSLGESSR-TTTLLTLYSSF-SFFGRLLSAAPDYMRAKVYFARTGWLTI 462 (609)
Q Consensus 387 ~~~Fwll~~~~~~g~g~Glm-~I~n~g~-I~~al~~~~~-~~~~VSl~Si~-n~~GRl~~g~SD~l~~~~~~~R~~~l~~ 462 (609)
|..-|.+++..++.. .|.+ +..-++. +.++++.+.. ....++...+. ..++.+..+. .||++.+|. ++..
T Consensus 14 ~~~~~~~~~~~~~~~-~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~----~dr~g~r~~-~~~~ 87 (393)
T PRK15011 14 DLTSTAFLIVAFLTG-IAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR----SDKRGDRKS-LIVF 87 (393)
T ss_pred cchhHHHHHHHHHHH-HHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH----HhcccchhH-HHHH
Confidence 555666666655532 3333 2233333 3445555222 12222333332 2233333443 444443343 3333
Q ss_pred HHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCc--hhhhhHHHhhhhhHHHHHHHHHHHHh
Q 046386 463 ALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSV--GVNHNILITNIPIGSLVYGFLAAIVY 540 (609)
Q Consensus 463 ~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~f--g~nyg~~~~a~~~gs~~~~~i~g~iy 540 (609)
..+...++..+.+..++...+.+...+.|...+.......+++.|....++- +..-++...+..+|..+++.++|.+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~ 167 (393)
T PRK15011 88 CCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALA 167 (393)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 2333334443333223233333344444545555666666667776643322 22235677778899999999999999
Q ss_pred hccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHH
Q 046386 541 DSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASV 585 (609)
Q Consensus 541 D~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl 585 (609)
|..+ .|.+|++.+.++++..++..
T Consensus 168 ~~~g---------------------w~~~f~~~~~~~~~~~~~~~ 191 (393)
T PRK15011 168 MGFS---------------------FTVMYLSAAVAFIVCGVMVW 191 (393)
T ss_pred HhcC---------------------hHHHHHHHHHHHHHHHHHHH
Confidence 8653 89999988877766655443
No 178
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=96.91 E-value=0.0091 Score=66.93 Aligned_cols=173 Identities=10% Similarity=0.030 Sum_probs=107.1
Q ss_pred eecchhHHHHHhcCCcc-cchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCc----
Q 046386 407 YSNNLGQIAQSLGESSR-TTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNA---- 480 (609)
Q Consensus 407 ~I~n~g~I~~al~~~~~-~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~---- 480 (609)
...++.++.+.++.++. ......+-.+...+.-.+.| +||....|++++|++.+.. .+...++++++...++.
T Consensus 23 ~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g-~~~~~~~l~ll~~~~~~~~~~ 101 (477)
T TIGR01301 23 QLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAG-AALVAFAVILIGFAADIGHLF 101 (477)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHH-HHHHHHHHHHHHhCchhhhhc
Confidence 45567778888877433 34455555666777777778 7998887888777754332 23334444444321111
Q ss_pred -------------chhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCc--hhhhhHHHhhhhhHHHHHHHHHHHH--hhcc
Q 046386 481 -------------VALQAGTSLIGLSSGFIFAAAVSITSELFGPNSV--GVNHNILITNIPIGSLVYGFLAAIV--YDSN 543 (609)
Q Consensus 481 -------------~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~f--g~nyg~~~~a~~~gs~~~~~i~g~i--yD~~ 543 (609)
..+.++..+..+++....+-+.++++|++..++- +.-+++......+|+.+++.+.|.. ++..
T Consensus 102 ~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~ 181 (477)
T TIGR01301 102 GDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIF 181 (477)
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhc
Confidence 1112223345568888888899999999997754 5677777777788998888777754 3321
Q ss_pred CCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 046386 544 VSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLLF 588 (609)
Q Consensus 544 ~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l~ 588 (609)
.-.. ++.++.-..-++..|++.+.+.++.++++++..
T Consensus 182 ~~~~--------~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v 218 (477)
T TIGR01301 182 PFTK--------TEACGVSCANLKSCFLIDIILLAILTYIALSAV 218 (477)
T ss_pred cccc--------ccccccccchHHHHHHHHHHHHHHHHHHHeeee
Confidence 1100 011122333589999998887777777776654
No 179
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=96.87 E-value=0.016 Score=62.18 Aligned_cols=140 Identities=13% Similarity=-0.001 Sum_probs=84.1
Q ss_pred chhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHH
Q 046386 410 NLGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGT 487 (609)
Q Consensus 410 n~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s 487 (609)
-+....++++.+. .....+++.++...++-++.| ++|...|+....|. +.+..... ...+....++...+++.-
T Consensus 26 ~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~l~i~~ 101 (382)
T PRK11128 26 FWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRL--LALLTLLF--AVAFWFGAHSFWLLFVAI 101 (382)
T ss_pred hHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHH--HHHHHHHH--HHHHHHhcccHHHHHHHH
Confidence 3455566666532 234455565555555555555 45655432211122 11111111 111122123345556667
Q ss_pred HHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccH
Q 046386 488 SLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYF 567 (609)
Q Consensus 488 ~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~ 567 (609)
.+.|++.++.+...-+++.++ .|+.+..+|.......+|..+++.+.|.++|..+ +|
T Consensus 102 ~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g---------------------~~ 158 (382)
T PRK11128 102 GLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFG---------------------EQ 158 (382)
T ss_pred HHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcC---------------------hh
Confidence 778988888888877777765 4667777888877778888889999999999864 78
Q ss_pred HHHHHHHHH
Q 046386 568 LTFVLWGCV 576 (609)
Q Consensus 568 ~tF~i~a~~ 576 (609)
..|.+.+..
T Consensus 159 ~~f~~~~~~ 167 (382)
T PRK11128 159 AILWILTAG 167 (382)
T ss_pred HHHHHHHHH
Confidence 888776643
No 180
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.83 E-value=0.17 Score=56.92 Aligned_cols=123 Identities=21% Similarity=0.122 Sum_probs=84.2
Q ss_pred cccccHHHH-HHhCCChhhhhHHHHhhhcccch-hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHH
Q 046386 58 FSAYSSDLK-SVLGVSQVQLNYLATASDLGKLF-GWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYILV 135 (609)
Q Consensus 58 fs~YS~~lk-~~L~~sq~qln~I~~a~~lG~~~-G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l 135 (609)
-+.|++..+ +..+.+....+.....--+|..+ +++.|.+.|.+.+..+++++.++..++= ...++. ..++..
T Consensus 101 ~~~~s~~~~~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~--~~~a~a----~~~~~~ 174 (521)
T KOG0255|consen 101 SSVYSIVSEWNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFG--ILTAFA----PNYWMF 174 (521)
T ss_pred CCcccccchhceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHH--HHHHHh----CcHHHH
Confidence 445555554 77788889988888888899855 4555899999988777777544433222 111122 336666
Q ss_pred HHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHH
Q 046386 136 FFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAG 187 (609)
Q Consensus 136 ~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~ 187 (609)
+.+=++.|.+.+...+.+....+..++ ++|+.+..+ ..++-..+.+...+.
T Consensus 175 ~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~ 226 (521)
T KOG0255|consen 175 LIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGA 226 (521)
T ss_pred HHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHH
Confidence 666688998877778888899999996 889999988 555544444444443
No 181
>PRK09952 shikimate transporter; Provisional
Probab=96.78 E-value=0.055 Score=59.56 Aligned_cols=128 Identities=13% Similarity=0.071 Sum_probs=81.7
Q ss_pred hhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcc--------hhHHHHHHHHhhhcchhhhHHHHH
Q 046386 435 SFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAV--------ALQAGTSLIGLSSGFIFAAAVSIT 505 (609)
Q Consensus 435 n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~--------~l~~~s~liG~~yG~~f~~~P~i~ 505 (609)
.+++|.+++ +.-++.||+++ ++.+.+.+++.+++.++.+..++.. .+.+.-.+.|++.|+.++...+++
T Consensus 73 ~~~~~~~g~~~~G~l~Dr~Gr--r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~ 150 (438)
T PRK09952 73 GFLFRPLGGVVFGHFGDRLGR--KRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLA 150 (438)
T ss_pred HHHHHhhHHHHHHHHHHhhcc--HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHH
Confidence 446665543 23355555543 3344445555666655555334332 366677899999999999999999
Q ss_pred HHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHH
Q 046386 506 SELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVS 577 (609)
Q Consensus 506 se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~ 577 (609)
+|++..|+-|..-+....+..+|..+.+.+.+.+...-...+. .....|..|++.+..+
T Consensus 151 ~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~-------------~~~gWr~~f~~~~~~~ 209 (438)
T PRK09952 151 VESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQF-------------LSWGWRIPFLFSIVLV 209 (438)
T ss_pred HHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHh-------------hccChHHHHHHHHHHH
Confidence 9999999988888888888888887776555544322110000 0114889998766544
No 182
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=96.73 E-value=0.027 Score=59.24 Aligned_cols=126 Identities=17% Similarity=0.205 Sum_probs=80.5
Q ss_pred hhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcc--------hhHHHHHHHHhhhcchhhhHHHHHHHhh
Q 046386 438 GRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAV--------ALQAGTSLIGLSSGFIFAAAVSITSELF 509 (609)
Q Consensus 438 GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~--------~l~~~s~liG~~yG~~f~~~P~i~se~F 509 (609)
|-+..| ++.||++++|. +.+..++..++.++....++.. .+.+.-.+.|++.|..++..+++++|.+
T Consensus 51 ~~~~~G---~l~dr~g~r~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~ 125 (394)
T TIGR00883 51 GAIVFG---HFGDRIGRKKT--LVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYA 125 (394)
T ss_pred HHHHhh---hhhhhhhhHHH--HHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcC
Confidence 334445 44455543333 3344445555555554333221 3666778999999999999999999999
Q ss_pred CCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHH
Q 046386 510 GPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGL 581 (609)
Q Consensus 510 G~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~ 581 (609)
-.|+-+...++...+..+|..+++.+.+.+.+.-..... ....+|..|++.+..++++.
T Consensus 126 ~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~-------------~~~~w~~~~~~~~~~~~~~~ 184 (394)
T TIGR00883 126 PPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDAL-------------LEWGWRIPFLVSAVLVLIGL 184 (394)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHh-------------hccchHHHHHHHHHHHHHHH
Confidence 999999999998888888888887766555432110000 01148889987766555443
No 183
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=96.73 E-value=0.037 Score=59.51 Aligned_cols=145 Identities=17% Similarity=0.148 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHhcCCccccccccHHHHHHhCCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q 046386 39 WMILVATIWIQAFTGTNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFFGY 117 (609)
Q Consensus 39 w~~lvas~~v~l~~Gt~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~GY 117 (609)
|..+++..+.+.+.+..| .|.|.+-+++|++..+.-.+-..+.++. ..+.++|.+.+..+++..+.+|.+...+++
T Consensus 208 ~~~l~~~~l~~~~~~~~~---~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~ 284 (382)
T TIGR00902 208 LRFLAAVCLIQGAHAAYY---GFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRW 284 (382)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHH
Confidence 555555555555544444 3556655669999999765555444444 334556777777777777778777766666
Q ss_pred HHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhh-hhhhhhHHHHHHHHhhhCCC
Q 046386 118 GLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTV-SFNGVSAAIYALAGNAINPS 193 (609)
Q Consensus 118 ~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k-~~~GLSaaI~s~i~~~~f~~ 193 (609)
... ... ...|.+....++-|.+.+.+..+++.-..++ | ++|++..|+.- ...|++.++.+.+.-.+++.
T Consensus 285 ~~~----~~~--~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~ 355 (382)
T TIGR00902 285 AII----GAI--EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPT 355 (382)
T ss_pred HHH----HhH--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 543 111 1235566666777776666677766666666 6 67899899864 46888888888887666543
No 184
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.59 E-value=0.026 Score=63.59 Aligned_cols=141 Identities=18% Similarity=0.228 Sum_probs=102.8
Q ss_pred chhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHH-HHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHH
Q 046386 425 TTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPT-PVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVS 503 (609)
Q Consensus 425 ~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~-~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~ 503 (609)
....+++.+.-.+|.+.++ ++.+|+..+|- +....+.- ..+.+-. ...+...+.+.=.+.|++-++.|...-.
T Consensus 84 ~~~~t~F~v~Yii~~~p~~---~L~~r~~ls~~--l~~~~~~w~~~~~~~~-~~~s~~~~ialr~llGl~es~~wP~~~~ 157 (495)
T KOG2533|consen 84 GVLDTVFYVGYIIGQFPSG---LLGDRFPLSKG--LSVSGILWGLFGFLTA-AVHSFPGLIALRFLLGLFESGGWPGVVA 157 (495)
T ss_pred hhHHHHHHHHHHHHHhhHH---HHHHhCChHHH--HHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHhcccchHHHH
Confidence 4567777777888888777 56666653322 21111111 1111111 2455666888889999999999999999
Q ss_pred HHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHH
Q 046386 504 ITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAA 583 (609)
Q Consensus 504 i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~ 583 (609)
+++.+|+.++.|+-.|+..++..+|+.++++++..++..++.. +...+|+.|+|.++++++..++
T Consensus 158 ~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~---------------~~~gW~~~FiI~G~i~~~~gi~ 222 (495)
T KOG2533|consen 158 ILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSG---------------GLAGWRWLFIIEGVITLVLGIV 222 (495)
T ss_pred HHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCC---------------CcCCceeehhHHHHHHHHHHhe
Confidence 9999999999999999999999999999999998887654422 2237999999999887766555
Q ss_pred HHH
Q 046386 584 SVL 586 (609)
Q Consensus 584 sl~ 586 (609)
.++
T Consensus 223 ~f~ 225 (495)
T KOG2533|consen 223 VFF 225 (495)
T ss_pred EEE
Confidence 443
No 185
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=96.55 E-value=0.065 Score=57.57 Aligned_cols=151 Identities=10% Similarity=0.070 Sum_probs=83.9
Q ss_pred chHHHHHHHHHHHHhcCCccccccccHHHHHHhCCChhhhhHHHHhhh-cccch-hhhhhhhhhhhhHHHHHHHHHHHHH
Q 046386 37 RKWMILVATIWIQAFTGTNFDFSAYSSDLKSVLGVSQVQLNYLATASD-LGKLF-GWLSGLALMYFPLWVVLFMAAFMGF 114 (609)
Q Consensus 37 ~Rw~~lvas~~v~l~~Gt~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~-lG~~~-G~~sGll~~~~P~~~vllig~~~~~ 114 (609)
+.|..++.....+++.+..|.| .++-+++ +|++.+++..+-.... ++..+ .++.|.+.|+.+++.++.++.+...
T Consensus 209 ~~~~~~~~~~l~~~~~~~~~~~--~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~ 285 (390)
T TIGR02718 209 LAWSLLALALLSAMTAVSGFGL--SKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAG 285 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHH--hhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3466666666666666666664 3455655 7999999766544332 23333 3567888888877666555544432
Q ss_pred HHHHHHHHHHhhcC-cchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC--CCCcchhhhhhhhhhhhHHHHHHHHhhhC
Q 046386 115 FGYGLQWLVISHVI-SLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP--ANRALALSLTVSFNGVSAAIYALAGNAIN 191 (609)
Q Consensus 115 ~GY~~~~l~~~~~~-~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP--~~RG~avgl~k~~~GLSaaI~s~i~~~~f 191 (609)
.+. ..+....... ....+.+.....+.+...+....+.....++..+ ++||++.++.-+..++++.+.+.+.-.++
T Consensus 286 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~ 364 (390)
T TIGR02718 286 SLA-LLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLT 364 (390)
T ss_pred HHH-HHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222 2222222211 1112222222223222222222222222344443 67899999999999999988888766554
No 186
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=96.48 E-value=0.057 Score=47.58 Aligned_cols=97 Identities=19% Similarity=0.191 Sum_probs=67.6
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcch
Q 046386 90 GWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALA 168 (609)
Q Consensus 90 G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~a 168 (609)
+.+.|.+.|+..+.....++.....++....... .++|.+....++.|.+.+..+........+.+| ++|+.+
T Consensus 15 ~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (141)
T TIGR00880 15 SPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS------SNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVA 88 (141)
T ss_pred HhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh------ccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHH
Confidence 4566788888876666666665555555443221 124556666677777767666666666788998 669999
Q ss_pred hhhhhhhhhhhHHHHHHHHhhhCC
Q 046386 169 LSLTVSFNGVSAAIYALAGNAINP 192 (609)
Q Consensus 169 vgl~k~~~GLSaaI~s~i~~~~f~ 192 (609)
.|+......+++.+...+...+.+
T Consensus 89 ~~~~~~~~~~g~~~~~~~~~~~~~ 112 (141)
T TIGR00880 89 LGLMSAGIALGPLLGPPLGGVLAQ 112 (141)
T ss_pred HHHHHHhHHHHHHHhHHhHHHHhc
Confidence 999999999998888877766653
No 187
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=96.45 E-value=0.019 Score=65.23 Aligned_cols=152 Identities=20% Similarity=0.160 Sum_probs=103.8
Q ss_pred HHHhhhHHHHHHHHHHHhhccccceeecchhHHHHHhcC------CcccchhhHHHHHhhhhhhhhcc-chhhhhhhccc
Q 046386 382 RLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQSLGE------SSRTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYF 454 (609)
Q Consensus 382 ~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~al~~------~~~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~ 454 (609)
+.-|++++|..+|++-.+ +|+|.-.+..+. .......|+++....++-.++.+ ++-.+.||+.
T Consensus 4 ~aplr~~~Fr~lw~a~~i---------S~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~d- 73 (524)
T PF05977_consen 4 FAPLRNRNFRRLWIAQLI---------SNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFD- 73 (524)
T ss_pred cccccCchHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-
Confidence 345788999999988765 233333333211 12456789999999999997654 3445566653
Q ss_pred chhHHHHHHHHHHHHHHHHH---H--hcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHH
Q 046386 455 ARTGWLTIALLPTPVAFCLL---A--TSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGS 529 (609)
Q Consensus 455 ~R~~~l~~~~~~~~~~~ll~---~--~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs 529 (609)
|...+..+.+++.+..+++ . ..-++..+++.+.++|++-.......-+++.|+-..++....-.+..+..-+..
T Consensus 74 -rrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar 152 (524)
T PF05977_consen 74 -RRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIAR 152 (524)
T ss_pred -chHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHH
Confidence 3334444444443222221 1 223456788889999999999999999999999999998887777777777888
Q ss_pred HHHHHHHHHHhhccC
Q 046386 530 LVYGFLAAIVYDSNV 544 (609)
Q Consensus 530 ~~~~~i~g~iyD~~~ 544 (609)
.+++.++|.++..-+
T Consensus 153 ~iGPalgG~Lva~~G 167 (524)
T PF05977_consen 153 IIGPALGGILVAFFG 167 (524)
T ss_pred hccchHHHHHHHHHH
Confidence 888888888887654
No 188
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=96.41 E-value=0.015 Score=63.18 Aligned_cols=148 Identities=16% Similarity=0.144 Sum_probs=89.1
Q ss_pred cchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCc------chhHHHHHHHHhhhcc
Q 046386 424 TTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNA------VALQAGTSLIGLSSGF 496 (609)
Q Consensus 424 ~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~------~~l~~~s~liG~~yG~ 496 (609)
.....++..++..+...+.| ++|....|+++.|++ +.+...+.+++.+++...+.. ..+.+...+.+.+|+.
T Consensus 37 ~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~-i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (437)
T TIGR00792 37 VGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPW-LLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGLFYSF 115 (437)
T ss_pred HHHHHHHHHHHHHhccchheEeeecCCCCCCCcchh-HHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence 45677888888999999999 799988888776774 444444555555444322211 1223345566777776
Q ss_pred hhhhHHHHHHHhhC-CCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHH
Q 046386 497 IFAAAVSITSELFG-PNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGC 575 (609)
Q Consensus 497 ~f~~~P~i~se~FG-~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~ 575 (609)
...-+-++..|+.. .|+-+...++-.....+|+.+.+.+.+.+...-..... ...++..|.+.++
T Consensus 116 ~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~--------------~~g~~~~~~i~~~ 181 (437)
T TIGR00792 116 VNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDD--------------KFGWFMFALVLAL 181 (437)
T ss_pred hcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcc--------------cccHHHHHHHHHH
Confidence 55555566677653 34555666665566666766666555555532211000 1148888888887
Q ss_pred HHHHHHHHHHH
Q 046386 576 VSVVGLAASVL 586 (609)
Q Consensus 576 ~~~~~~~~sl~ 586 (609)
++++..++...
T Consensus 182 l~~~~~~~~~~ 192 (437)
T TIGR00792 182 IGVVSLIICFF 192 (437)
T ss_pred HHHHHHHHHHc
Confidence 77666555443
No 189
>PRK11462 putative transporter; Provisional
Probab=96.40 E-value=0.089 Score=58.55 Aligned_cols=60 Identities=13% Similarity=0.130 Sum_probs=36.1
Q ss_pred hhHHHHHHHHhhhcchhhhHHHHHHHh-------hCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhh
Q 046386 482 ALQAGTSLIGLSSGFIFAAAVSITSEL-------FGPNSVGVNHNILITNIPIGSLVYGFLAAIVYD 541 (609)
Q Consensus 482 ~l~~~s~liG~~yG~~f~~~P~i~se~-------FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD 541 (609)
.+++..++.|+..|....+..++++|. .|.++=|..|+....+.=+|.-+++.+.|.+.+
T Consensus 320 ~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~ 386 (460)
T PRK11462 320 TMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLA 386 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556677887777666666666654 778888887777543333444444444444443
No 190
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=96.40 E-value=0.038 Score=59.75 Aligned_cols=127 Identities=17% Similarity=0.198 Sum_probs=87.7
Q ss_pred hhhhhhcc-chhhhhhh-cccchhHHHHHHHHHHHHHHHHHHhcCC---cchhHHHHHHHHhhhcchhhhHHHHHHHhhC
Q 046386 436 FFGRLLSA-APDYMRAK-VYFARTGWLTIALLPTPVAFCLLATSGN---AVALQAGTSLIGLSSGFIFAAAVSITSELFG 510 (609)
Q Consensus 436 ~~GRl~~g-~SD~l~~~-~~~~R~~~l~~~~~~~~~~~ll~~~~~~---~~~l~~~s~liG~~yG~~f~~~P~i~se~FG 510 (609)
.+.++++| ++|++..+ .+. |+.|+.+..++++++..+++..+. ...+++...+.++++..+.....+++.|++-
T Consensus 46 ~~~~~l~g~~~Dr~~~~~~g~-rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~ 124 (402)
T PRK11902 46 YIFKFLWAPLMDRYTPPLLGR-RRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLH 124 (402)
T ss_pred HHHHHHHHHHHHcccccCCCc-chhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 46677777 66765211 133 333666666666655555442321 1234445566788888888899999999999
Q ss_pred CCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHH
Q 046386 511 PNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAA 583 (609)
Q Consensus 511 ~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~ 583 (609)
.|+-+..-++...+..+|..+++.+.+.+.|... -.|..|.+.+.++++..+.
T Consensus 125 ~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~--------------------gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 125 PEERGAGAAVKVLGYRLAMLVSGGLALWLADRVL--------------------GWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhccc--------------------CHHHHHHHHHHHHHHHHHH
Confidence 8889998899988899999998888888887531 2788998888776654443
No 191
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=96.36 E-value=0.018 Score=62.79 Aligned_cols=149 Identities=15% Similarity=0.172 Sum_probs=110.1
Q ss_pred HHHHHhcCCc-ccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHH
Q 046386 413 QIAQSLGESS-RTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLI 490 (609)
Q Consensus 413 ~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~li 490 (609)
.|.++.+.++ +-...-|.++|.=.++...+| +||.-.. |. ++.+.+++.++..+++-..+....+.+.-.+-
T Consensus 54 ~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~np-----r~-fm~~gLilsai~nil~Gfs~s~~~~~~l~~ln 127 (448)
T COG2271 54 ALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNP-----RY-FMAFGLILSAIVNILFGFSPSLFLFAVLWVLN 127 (448)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCC-----ce-eehHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 3444444433 346788999999999999999 6777543 33 44555555666555554344445567778889
Q ss_pred HhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHH--HHHhhccCCCCCCcCcccCCCcccccccccHH
Q 046386 491 GLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLA--AIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFL 568 (609)
Q Consensus 491 G~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~--g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~ 568 (609)
|+.=|..|+-.-.++..+|..|.=|+-|++-.++--+|+.+-+.+. |.+-++.. -|.
T Consensus 128 g~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~---------------------w~~ 186 (448)
T COG2271 128 GWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGG---------------------WRA 186 (448)
T ss_pred HHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccc---------------------hhH
Confidence 9999999999999999999999999999999999999998887777 88877663 789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 046386 569 TFVLWGCVSVVGLAASVLLFLRT 591 (609)
Q Consensus 569 tF~i~a~~~~~~~~~sl~l~~r~ 591 (609)
+|++-+++++ ++++++.++-
T Consensus 187 ~f~~pgiiai---ival~~~~~~ 206 (448)
T COG2271 187 AFYFPGIIAI---IVALILLFLL 206 (448)
T ss_pred HHHHHHHHHH---HHHHHHHHHh
Confidence 9999877654 4444444443
No 192
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.32 E-value=0.011 Score=64.04 Aligned_cols=142 Identities=18% Similarity=0.164 Sum_probs=110.4
Q ss_pred chhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHH
Q 046386 425 TTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVS 503 (609)
Q Consensus 425 ~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~ 503 (609)
..+-+..++.+.+--.+.| +.|++. +...+.+-+.+|...-.+++.......+.++=.+-|++.-..++.--+
T Consensus 109 G~LFaskA~~qllvnp~~G~l~~~iG------y~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsgla 182 (464)
T KOG3764|consen 109 GLLFASKALVQLLVNPFFGNLIDRIG------YKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLA 182 (464)
T ss_pred hHHHHHHHHHHHHhcccchhhHHHhc------cccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHH
Confidence 3455556666666666666 556553 223455555566666667764445567888889999999999999999
Q ss_pred HHHHhhCCCCc-hhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHH
Q 046386 504 ITSELFGPNSV-GVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLA 582 (609)
Q Consensus 504 i~se~FG~k~f-g~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~ 582 (609)
+++|.|..+|= |+--|+.....++|-++++-+.|.+||.-+ |+.+|+|.++++++..+
T Consensus 183 mlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~G---------------------k~aPFlVL~~v~Lld~~ 241 (464)
T KOG3764|consen 183 MLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG---------------------KSAPFLVLAIVLLLDGA 241 (464)
T ss_pred HHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcC---------------------CcCcHHHHHHHHHHHHH
Confidence 99999996665 899999999999999999999999999986 78889999999999999
Q ss_pred HHHHHHHHHhh
Q 046386 583 ASVLLFLRTRH 593 (609)
Q Consensus 583 ~sl~l~~r~r~ 593 (609)
+.+.+.-.+|.
T Consensus 242 L~l~vi~p~~~ 252 (464)
T KOG3764|consen 242 LQLLVIEPTEM 252 (464)
T ss_pred HHHheeCcccc
Confidence 99988766553
No 193
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=96.30 E-value=0.49 Score=51.29 Aligned_cols=100 Identities=21% Similarity=0.075 Sum_probs=63.3
Q ss_pred CCCCCCCCCCccCCCC-CCcccchhhhhhhcccCC-chHHHHHHHHHHHHhcCCccccccccHHHHHHhCCChhhhhHHH
Q 046386 3 SSSKSTDTEPEKKRRP-VNIYRTLIHLFFLMAGQS-RKWMILVATIWIQAFTGTNFDFSAYSSDLKSVLGVSQVQLNYLA 80 (609)
Q Consensus 3 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~m~~~~-~Rw~~lvas~~v~l~~Gt~Y~fs~YS~~lk~~L~~sq~qln~I~ 80 (609)
-++|++|.++...+-+ +|--+|.-.-.--|...+ +--+..++++--+..++-.-.=|..+|.+++..+.+..|...|.
T Consensus 40 ~~~~~~~~~~~~~~~~~~~k~~tv~ea~~aigfgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt 119 (528)
T KOG0253|consen 40 QPSKSDDDLFDSNDFSDTAKSFTVDEAMNAIGFGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLT 119 (528)
T ss_pred CCCccccCCccccccccccceeeehhhhhhcCcccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHH
Confidence 4677777776654433 233333222111111121 22344455555556666666678999999999999999999999
Q ss_pred Hhhhcccchhh-hhhhhhhhhhH
Q 046386 81 TASDLGKLFGW-LSGLALMYFPL 102 (609)
Q Consensus 81 ~a~~lG~~~G~-~sGll~~~~P~ 102 (609)
..-+.|+.+|- .=|+.+|...+
T Consensus 120 ~~v~~gmllga~~w~l~~d~~gr 142 (528)
T KOG0253|consen 120 LSVFLGMLVGAMVWGLSADTIGR 142 (528)
T ss_pred HHHHhhhhhhhhhhheehhhhhc
Confidence 99999996653 33787877654
No 194
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.29 E-value=1.5 Score=48.65 Aligned_cols=108 Identities=20% Similarity=0.211 Sum_probs=70.1
Q ss_pred ccHHHHHHhCCChhhhhHHHHhhhcccchhhhhhhhhhhhhHH-----HHHHHHHHHHHHHHHHHHHHHhhcCcchhHHH
Q 046386 61 YSSDLKSVLGVSQVQLNYLATASDLGKLFGWLSGLALMYFPLW-----VVLFMAAFMGFFGYGLQWLVISHVISLPYILV 135 (609)
Q Consensus 61 YS~~lk~~L~~sq~qln~I~~a~~lG~~~G~~sGll~~~~P~~-----~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l 135 (609)
-.+-+|++||+|..|++.+....++.-.+--+-|++.|.+|.+ .-+++|++++.++.... ....+..+ .....
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~-~~~~~~~~-s~~~~ 89 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVL-ALLPASES-SAAIA 89 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHH-Hhcccccc-hhhhH
Confidence 3467999999999999999999999888888889999999843 34566766664444332 22222111 11222
Q ss_pred HHHHHHhhcchhhhhh---HHHHHHHHhcCCCCcchhh
Q 046386 136 FFLCLLSGLSITWFNT---VCFVLCIQNFPANRALALS 170 (609)
Q Consensus 136 ~~~~~l~G~g~~~~~t---aalvT~~kNFP~~RG~avg 170 (609)
..++++...|....|. +-++-.++.-|+.||-..+
T Consensus 90 ~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS 127 (433)
T PF03092_consen 90 VVLLFLASFGYAFADVAADALVVELARREPESRGDLQS 127 (433)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHH
Confidence 3344444444444443 4467888999988776544
No 195
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.26 E-value=0.046 Score=63.71 Aligned_cols=140 Identities=19% Similarity=0.259 Sum_probs=94.2
Q ss_pred hhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCc--------chhHHHHHHHHhhhcch
Q 046386 427 LLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNA--------VALQAGTSLIGLSSGFI 497 (609)
Q Consensus 427 ~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~--------~~l~~~s~liG~~yG~~ 497 (609)
.+..+.-+.++--++.| ++|-.. .|.+.+.+..++..+++.+++..+.+ ..++++-+++.++.|+.
T Consensus 28 i~~~f~~l~yl~pilGg~iAD~~l-----G~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~Ggi 102 (654)
T TIGR00926 28 LFHTFTYLCYLTPLIGAIIADGWL-----GKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGI 102 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhcccc
Confidence 33344433444444445 456543 34445556666677777766522111 23667888899999999
Q ss_pred hhhHHHHHHHhhCCC---CchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCccccc-ccccHHHHHHH
Q 046386 498 FAAAVSITSELFGPN---SVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMG-RHCYFLTFVLW 573 (609)
Q Consensus 498 f~~~P~i~se~FG~k---~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G-~~Cy~~tF~i~ 573 (609)
=+.+.+...|.|..+ .+-.-|++...+.-+|+++...+.+++-+.. .|.| ..||..+|.+.
T Consensus 103 Kp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~---------------~~fg~~~~~~~aF~i~ 167 (654)
T TIGR00926 103 KPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDV---------------GCFGCQDCYPLAFGVP 167 (654)
T ss_pred ccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---------------cccccCcchHHHHHHH
Confidence 999999999999854 3666788888888999999888887775432 3555 45999999888
Q ss_pred HHHHHHHHHHHHH
Q 046386 574 GCVSVVGLAASVL 586 (609)
Q Consensus 574 a~~~~~~~~~sl~ 586 (609)
+++.++++++-+.
T Consensus 168 ~i~m~ia~lvf~~ 180 (654)
T TIGR00926 168 AILMILALIVFMA 180 (654)
T ss_pred HHHHHHHHHHHHH
Confidence 8877766655443
No 196
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=96.25 E-value=0.095 Score=57.41 Aligned_cols=99 Identities=15% Similarity=0.068 Sum_probs=65.5
Q ss_pred Hhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCc--------chhHHHHHHHHhhhcchhhhHHH
Q 046386 433 SFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNA--------VALQAGTSLIGLSSGFIFAAAVS 503 (609)
Q Consensus 433 i~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~--------~~l~~~s~liG~~yG~~f~~~P~ 503 (609)
...++||.+++ +.-++.||++++| .+.+..++++++.++.+..++. ..+.+.=.+.|++.|+.++...+
T Consensus 70 ~~~~~~~~ig~~~~G~l~Dr~Grr~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~ 147 (432)
T PRK10406 70 AAGFLMRPIGGWLFGRIADKHGRKK--SMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSAT 147 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcHH--HHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHH
Confidence 34677887654 3446666665443 3444445555555554423322 24677788999999999999999
Q ss_pred HHHHhhCCCCchhhhhHHHhhhhhHHHHHH
Q 046386 504 ITSELFGPNSVGVNHNILITNIPIGSLVYG 533 (609)
Q Consensus 504 i~se~FG~k~fg~nyg~~~~a~~~gs~~~~ 533 (609)
+++|.+-.|+-|...++...+...|..+..
T Consensus 148 ~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~ 177 (432)
T PRK10406 148 YMSEVAVEGRKGFYASFQYVTLIGGQLLAL 177 (432)
T ss_pred HHHHhCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 999999988888776766555555544444
No 197
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=96.20 E-value=0.063 Score=58.76 Aligned_cols=115 Identities=17% Similarity=0.118 Sum_probs=80.1
Q ss_pred hhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHH---hcCCcchhHHHHHHHHhhhcchhhhH
Q 046386 426 TLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLA---TSGNAVALQAGTSLIGLSSGFIFAAA 501 (609)
Q Consensus 426 ~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~---~~~~~~~l~~~s~liG~~yG~~f~~~ 501 (609)
.+.+++....++|-++.+ .+.++.||++++|. +.+..++++++.+++. ..++...+.+...+.|++.|..++..
T Consensus 38 ~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~--~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~ 115 (410)
T TIGR00885 38 FQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAG--ILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAA 115 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHH--HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhh
Confidence 345555556666665554 45577777764443 3444445555655542 12334556777889999999999999
Q ss_pred HHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhc
Q 046386 502 VSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDS 542 (609)
Q Consensus 502 P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~ 542 (609)
.+.+.+....++.+..-|+......+|+.+++.+.+.+...
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~ 156 (410)
T TIGR00885 116 NPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILS 156 (410)
T ss_pred hHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999988777888888888888888888888888777543
No 198
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.16 E-value=0.039 Score=61.44 Aligned_cols=177 Identities=19% Similarity=0.316 Sum_probs=117.6
Q ss_pred HhhhHHHHHHHHHHHhhccccceeecchhHHHHHhcCCcc-cchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHH
Q 046386 384 LVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQSLGESSR-TTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLT 461 (609)
Q Consensus 384 ~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~al~~~~~-~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~ 461 (609)
++-..+||--|-=+.. -++.+.+=.-+..+.++.++. +..++|.++.+-+.-=+++| ++|.+. +..| .+.
T Consensus 25 ~if~vE~WERFsyYGm---raiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~L---G~~~--tI~ 96 (498)
T COG3104 25 LIFFVELWERFSYYGM---RAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVL---GTRR--TIV 96 (498)
T ss_pred HHHHHHHHHHHhhhhh---HHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhc---chhH--HHH
Confidence 5666677766554432 223333333444444666433 44567777777777777777 577653 3233 455
Q ss_pred HHHHHHHHHHHHHHhc--CCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchh--hhhHHHhhhhhHHHHHHHHHH
Q 046386 462 IALLPTPVAFCLLATS--GNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGV--NHNILITNIPIGSLVYGFLAA 537 (609)
Q Consensus 462 ~~~~~~~~~~ll~~~~--~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~--nyg~~~~a~~~gs~~~~~i~g 537 (609)
+..+++.++|++++.. ..+..++++.++++.++|..=+-.-+++.|++..++--. -+++..++..+|+++.+.+.+
T Consensus 97 lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~ 176 (498)
T COG3104 97 LGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITG 176 (498)
T ss_pred HHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHH
Confidence 5566788999998743 257789999999999999999999999999999776442 234445788899999999988
Q ss_pred HHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046386 538 IVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLLFLRTRH 593 (609)
Q Consensus 538 ~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l~~r~r~ 593 (609)
.+-+.. ||...|-+.+. |..+.++..+--||
T Consensus 177 ~~~~~~---------------------g~~~gF~~aav----Gm~~gl~~f~~~~r 207 (498)
T COG3104 177 LLAINY---------------------GWHVGFGLAAV----GMIIGLVIFLLGRR 207 (498)
T ss_pred HHHHhh---------------------CHHHHHHHHHH----HHHHHHHHHHHccc
Confidence 887654 57777765544 55555554444443
No 199
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=96.15 E-value=0.14 Score=56.29 Aligned_cols=146 Identities=25% Similarity=0.356 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHhcCCccccccccHHHHHHhCCChhhhh---HHHHhhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHH
Q 046386 39 WMILVATIWIQAFTGTNFDFSAYSSDLKSVLGVSQVQLN---YLATASDLGKLFGWLSGLALMYFPLWVVLFMAAFMGFF 115 (609)
Q Consensus 39 w~~lvas~~v~l~~Gt~Y~fs~YS~~lk~~L~~sq~qln---~I~~a~~lG~~~G~~sGll~~~~P~~~vllig~~~~~~ 115 (609)
++.++++.+++.+.+..|.|. +.-+++.-+++....- .++...++- +=+.++.+........++++ +.+
T Consensus 210 ~~Fll~~~l~~~~~~~~~~f~--~~yl~~~gg~~~~~~g~~~~l~~~aEi~--~f~~~~~~~~r~g~~~ll~~----a~~ 281 (400)
T PF03825_consen 210 LVFLLAAFLIGISHAAYYTFF--SIYLQELGGYSGSTIGILWALGVVAEIP--FFFFSGRFLKRFGIKWLLLL----ALV 281 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHHcccchhhHHHHHHHHHHHHHHH--HHHHHHHHHHhcCHHHHHHH----HHH
Confidence 345567777788888888876 4446665557666533 233344432 22334555554444444455 446
Q ss_pred HHHHHHHHHhhc-CcchhHHHHHH--HHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhh-hhhhhHHHHHHHHhhh
Q 046386 116 GYGLQWLVISHV-ISLPYILVFFL--CLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVS-FNGVSAAIYALAGNAI 190 (609)
Q Consensus 116 GY~~~~l~~~~~-~~~~~~~l~~~--~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~-~~GLSaaI~s~i~~~~ 190 (609)
.|.+=|..+... .+.+....... ..+=|..-+.+..+++.-..++.| +.|+++.|+.-+ .+|+++++.+.+.-.+
T Consensus 282 ~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l 361 (400)
T PF03825_consen 282 AYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWL 361 (400)
T ss_pred HHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 677777766654 22221111111 234455555678888888999999 558999999877 5799999999887776
Q ss_pred CC
Q 046386 191 NP 192 (609)
Q Consensus 191 f~ 192 (609)
++
T Consensus 362 ~~ 363 (400)
T PF03825_consen 362 YD 363 (400)
T ss_pred HH
Confidence 64
No 200
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=95.72 E-value=0.088 Score=59.15 Aligned_cols=128 Identities=18% Similarity=0.088 Sum_probs=92.4
Q ss_pred hhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHH
Q 046386 426 TLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSI 504 (609)
Q Consensus 426 ~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i 504 (609)
...|++-+...+|=++.| +||.+ .|...+.+.+++..+..++.+..++-..+.+.=.+.|++.++.+++...+
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~------GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~ 195 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRF------GRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGL 195 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhc------ccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhh
Confidence 344555555666666677 67764 34445556665666666666656777888999999999999999999999
Q ss_pred HHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHH
Q 046386 505 TSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAA 583 (609)
Q Consensus 505 ~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~ 583 (609)
++|++|.|+=+..=.+ ...+-.++++.+...+++.. . +|..+.+.+..+++.+++
T Consensus 196 ~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~---------------------Wr~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 196 VAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--D---------------------WRWLFWIISIPSGLFLLL 250 (521)
T ss_pred heeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--h---------------------HHHHHHHHHHHHHHHHHH
Confidence 9999999988777666 45555667777666666655 1 788888877776666555
No 201
>PRK15075 citrate-proton symporter; Provisional
Probab=95.71 E-value=0.24 Score=54.25 Aligned_cols=99 Identities=18% Similarity=0.163 Sum_probs=62.4
Q ss_pred hhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcc--------hhHHHHHHHHhhhcchhhhHHHHH
Q 046386 435 SFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAV--------ALQAGTSLIGLSSGFIFAAAVSIT 505 (609)
Q Consensus 435 n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~--------~l~~~s~liG~~yG~~f~~~P~i~ 505 (609)
.+++|.++. ++-++.||++++| .+....++..++..+....++.. .+.+.-.+.|++.|..++..++++
T Consensus 65 ~~l~~~ig~~~~G~l~Dr~Grr~--~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~ 142 (434)
T PRK15075 65 GFLMRPLGAIVLGAYIDRVGRRK--GLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYL 142 (434)
T ss_pred HHHHhhhHHHHHHHHhhhhchHH--HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHH
Confidence 455554432 2335555555333 33444445555555554333322 246667889999999999999999
Q ss_pred HHhhCCCCchhhhhHHHhhhhhHHHHHHHH
Q 046386 506 SELFGPNSVGVNHNILITNIPIGSLVYGFL 535 (609)
Q Consensus 506 se~FG~k~fg~nyg~~~~a~~~gs~~~~~i 535 (609)
+|++-.|+-|..-++......+|..+++.+
T Consensus 143 ~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~ 172 (434)
T PRK15075 143 AEIATPGRKGFYTSWQSASQQVAVVFAALL 172 (434)
T ss_pred HhhCCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999888766555554444433
No 202
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=95.68 E-value=0.091 Score=58.78 Aligned_cols=156 Identities=13% Similarity=0.112 Sum_probs=110.9
Q ss_pred HHHHhcCCcc--cchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHH
Q 046386 414 IAQSLGESSR--TTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLI 490 (609)
Q Consensus 414 I~~al~~~~~--~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~li 490 (609)
+.++++.+.. .....|.+...-.+.-+.+| ++|++. .|+ .+.+..+.-++..++.........+.+.=++.
T Consensus 52 L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG-----~K~-vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~ll 125 (511)
T TIGR00806 52 LLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLR-----YKP-VLVLQALSFVCVWLLLLLGTSVWHMQLMEVFY 125 (511)
T ss_pred HHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhC-----chH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334454332 35667777777888888888 566653 333 22222223333333333233356688888999
Q ss_pred HhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHH
Q 046386 491 GLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTF 570 (609)
Q Consensus 491 G~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF 570 (609)
|++-|..+ .+-.++..+|-.|+.++-.++...+..+|..+.+.+.+.+- .. |-+-|+.-.
T Consensus 126 GvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s~------------------gWr~y~~Ln 185 (511)
T TIGR00806 126 SVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-TL------------------GWISYSTLN 185 (511)
T ss_pred HHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc------------------CchhHHHHH
Confidence 99999999 99999999999999999999999999999999988777643 11 222599999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhH
Q 046386 571 VLWGCVSVVGLAASVLLFLRTRHAY 595 (609)
Q Consensus 571 ~i~a~~~~~~~~~sl~l~~r~r~~y 595 (609)
+|..+.-+++++++++|=...|..|
T Consensus 186 ~Isl~s~~~a~~~a~~LP~~~~sl~ 210 (511)
T TIGR00806 186 IISLVFMTFSVFLALFLKRPKRSLF 210 (511)
T ss_pred HHHHHHHHHHHHHHHhCCCCchhhh
Confidence 9998888999999999876666544
No 203
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=95.58 E-value=0.37 Score=53.45 Aligned_cols=180 Identities=17% Similarity=0.161 Sum_probs=101.0
Q ss_pred HHHhhhHHHHHHHHHHHhhccccceeecchhHHHHHhcCCcccchh---------hHHHHHhhhh-hhhhcc-chhhhhh
Q 046386 382 RLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQSLGESSRTTTL---------LTLYSSFSFF-GRLLSA-APDYMRA 450 (609)
Q Consensus 382 ~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~al~~~~~~~~~---------VSl~Si~n~~-GRl~~g-~SD~l~~ 450 (609)
+.++-+.--|-++=.-+-+.+ -|.+.|.++++..+.++.. --++..++++ |-.+.. ++|.+-
T Consensus 304 ~~Llgt~~~WFllDiafy~~n------L~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iG- 376 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQN------LFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIG- 376 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccc------cHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhh-
Confidence 344445455554433333222 2677888887764433322 2233333333 333343 466664
Q ss_pred hcccchhHHHHHHHHHHHHHHHHHHhcC----CcchhHHHHHHHHh----hhcchhhhHHHHHHHhhCCCCchhhhhHHH
Q 046386 451 KVYFARTGWLTIALLPTPVAFCLLATSG----NAVALQAGTSLIGL----SSGFIFAAAVSITSELFGPNSVGVNHNILI 522 (609)
Q Consensus 451 ~~~~~R~~~l~~~~~~~~~~~ll~~~~~----~~~~l~~~s~liG~----~yG~~f~~~P~i~se~FG~k~fg~nyg~~~ 522 (609)
|.+....-+.++++.++.++..- +...+.+...+..+ +=++.-. .+-+|.|=.+-=|+-||+-.
T Consensus 377 -----Rk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttf---ivpaE~FParvR~t~hGIsA 448 (538)
T KOG0252|consen 377 -----RKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTF---IVPAEIFPARVRSTCHGISA 448 (538)
T ss_pred -----hHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeE---EeehhhchHHHhhhhhhHHH
Confidence 33344444455556555554111 11223333333332 2223333 34468899999999999986
Q ss_pred hhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046386 523 TNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLLFLRTRH 593 (609)
Q Consensus 523 ~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l~~r~r~ 593 (609)
..-=.|+.++...++..-|++ ..+.. -++.+|++.++.+.++.+.++.+- .+++
T Consensus 449 A~GK~GAivg~~~F~~~t~~~--yp~~~--------------g~~~v~~i~~~~~~~gi~~T~l~p-Etk~ 502 (538)
T KOG0252|consen 449 ASGKAGAIVGAFGFLYLTDHN--YPPNI--------------GVRNVFIILAGCMLLGILFTLLIP-ETKG 502 (538)
T ss_pred HhccchHHHHHHHhhHhhhcc--CCccc--------------cchHHHHHHHHHHHHhHheeEEee-cccc
Confidence 666677777776666666654 11111 489999999999999999998886 5543
No 204
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=95.43 E-value=0.08 Score=55.24 Aligned_cols=90 Identities=17% Similarity=0.269 Sum_probs=62.5
Q ss_pred hhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcc----hhhhHHHHHHHhhCCCCchhhhhHHHh
Q 046386 448 MRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGF----IFAAAVSITSELFGPNSVGVNHNILIT 523 (609)
Q Consensus 448 l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~----~f~~~P~i~se~FG~k~fg~nyg~~~~ 523 (609)
+.+|++. +.||+...-+...++|..++.. -..=|.+.++.|++|-- .|...|.++.| +..||-||++..
T Consensus 323 i~Dk~G~-n~~wv~~a~~~tl~~H~~l~Ft--~lsPy~~m~~lGLsysllAcslWP~va~~vpE----~qLGTaygf~qs 395 (459)
T KOG4686|consen 323 ISDKYGF-NLWWVASACILTLLGHSGLFFT--FLSPYTSMTFLGLSYSLLACSLWPCVASLVPE----EQLGTAYGFIQS 395 (459)
T ss_pred hHhhhcc-eehhHHHHHHHHHHHhhhHHhh--hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCH----HHhcchHHHHHH
Confidence 3444442 2345555444555666665522 23347788899999975 56666666665 789999999988
Q ss_pred hhhhHHHHHHHHHHHHhhccC
Q 046386 524 NIPIGSLVYGFLAAIVYDSNV 544 (609)
Q Consensus 524 a~~~gs~~~~~i~g~iyD~~~ 544 (609)
---+|-.+-+.++|.+-|..+
T Consensus 396 IqNLgla~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 396 IQNLGLAFIPIIAGFIADGDG 416 (459)
T ss_pred HHhhhhhHHhhhhheeecCCC
Confidence 888888888999999999875
No 205
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=94.85 E-value=0.21 Score=56.26 Aligned_cols=133 Identities=18% Similarity=0.101 Sum_probs=90.0
Q ss_pred chhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHH
Q 046386 425 TTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVS 503 (609)
Q Consensus 425 ~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~ 503 (609)
+.++|.+++.+.+|-+.+| ++|.+.| ...+.+..++..++.++.+...+...+.++-++.|+++|+.-.+.|.
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GR------k~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~pi 165 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGR------KKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPV 165 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh------HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchh
Confidence 6789999999999999999 7888743 33455555566666666654557788999999999999999999999
Q ss_pred HHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHH
Q 046386 504 ITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAA 583 (609)
Q Consensus 504 i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~ 583 (609)
.++|+=-.+.=|..=....+...+|-.++ .+.|...+.. . .-+|..+.+....+++-.+.
T Consensus 166 y~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~-~------------------~~Wr~~~~~~~i~~~~~~~~ 225 (513)
T KOG0254|consen 166 YISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKV-Y------------------AGWRIPLGLALIPAVILALG 225 (513)
T ss_pred hHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccC-C------------------ccHHHHHHHHHHHHHHHHHH
Confidence 99999865454544444444444333333 3444443322 0 13787776666655555555
No 206
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=94.78 E-value=0.39 Score=53.64 Aligned_cols=175 Identities=16% Similarity=0.132 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHhhccccceeecchhHHHH-HhcCCcc-cchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHH
Q 046386 388 LDFWLYYIAYFCGGAIGLVYSNNLGQIAQ-SLGESSR-TTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIAL 464 (609)
Q Consensus 388 ~~Fwll~~~~~~g~g~Glm~I~n~g~I~~-al~~~~~-~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~ 464 (609)
....++...++. .|..-....-+.++.+ .++.+.. .+..+++..+--.+ +.++| ++|.+- ..+..|.+++.+..
T Consensus 26 ~~~~~~~~~y~~-qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~-i~G~rRr~~l~~~~ 102 (468)
T TIGR00788 26 VVLAIGLQVLFV-KGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFP-LFGYTKRWYLVLSG 102 (468)
T ss_pred hHHHHHHHHHHH-hhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcC-CCCccchHHHHHHH
Confidence 344445445543 2333223334444444 3566433 23455666655555 44577 788763 33455666666655
Q ss_pred HHHH-HHHHHHHhcCCcchhH-HHHHHHHhhhcchhhhHHHHHHHhhCCCCchh---hhhHHHhhhhhHHHHHHHHHHHH
Q 046386 465 LPTP-VAFCLLATSGNAVALQ-AGTSLIGLSSGFIFAAAVSITSELFGPNSVGV---NHNILITNIPIGSLVYGFLAAIV 539 (609)
Q Consensus 465 ~~~~-~~~ll~~~~~~~~~l~-~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~---nyg~~~~a~~~gs~~~~~i~g~i 539 (609)
++.. ++...++..++...+. +...+++++....-...=+++.|..- +.-+. +.........+|..+++.++|.+
T Consensus 103 ~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l 181 (468)
T TIGR00788 103 LLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPL 181 (468)
T ss_pred HHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHH
Confidence 4442 3222222111212223 25677888888888888899999887 43322 22233233446777788888888
Q ss_pred hhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHH
Q 046386 540 YDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLL 587 (609)
Q Consensus 540 yD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l 587 (609)
.|..+ .+..|.+.+.+.++..+..+++
T Consensus 182 ~~~~~---------------------~~~~f~~~a~l~ll~~~~~~~~ 208 (468)
T TIGR00788 182 LDKTL---------------------TRILFLITAALLLLQLFVSNLS 208 (468)
T ss_pred HHhcC---------------------cchHHHHHHHHHHHHHHHHHhc
Confidence 87754 5678888877776664443433
No 207
>PRK09669 putative symporter YagG; Provisional
Probab=94.65 E-value=0.13 Score=56.45 Aligned_cols=149 Identities=15% Similarity=0.093 Sum_probs=78.1
Q ss_pred cchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCC---c---chhHHHHHHHHhhhcc
Q 046386 424 TTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGN---A---VALQAGTSLIGLSSGF 496 (609)
Q Consensus 424 ~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~---~---~~l~~~s~liG~~yG~ 496 (609)
.....++..++..+.=.+.| ++|....|+++.|+| +.+..++.++...++...++ . ..+++...+.+.+|..
T Consensus 47 ~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~-il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~ 125 (444)
T PRK09669 47 MGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPY-LLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTA 125 (444)
T ss_pred HHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchh-HHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence 44566677777777777788 799988888877784 44444455555443332321 1 1233334566667776
Q ss_pred hhhhHHHHHHHhhCC-CCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHH
Q 046386 497 IFAAAVSITSELFGP-NSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGC 575 (609)
Q Consensus 497 ~f~~~P~i~se~FG~-k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~ 575 (609)
..--+-++.+|+.-. |+-+...++-.....+|..+.+.+..-+...-+.... ...|+.++.+.+.
T Consensus 126 ~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~--------------~~g~~~~~~i~~i 191 (444)
T PRK09669 126 INVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDE--------------QKGYFYAMMVMGL 191 (444)
T ss_pred hcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCch--------------hhhHHHHHHHHHH
Confidence 665566777776632 2233332332222233333333222111111110000 1268888888877
Q ss_pred HHHHHHHHHHHH
Q 046386 576 VSVVGLAASVLL 587 (609)
Q Consensus 576 ~~~~~~~~sl~l 587 (609)
++++...++++.
T Consensus 192 i~~v~~~~~~~~ 203 (444)
T PRK09669 192 LGVVLFFCCFFM 203 (444)
T ss_pred HHHHHHHHHhCC
Confidence 776666555443
No 208
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=94.29 E-value=10 Score=41.66 Aligned_cols=153 Identities=22% Similarity=0.270 Sum_probs=83.9
Q ss_pred hHHHHhhhHHHHHHHHHHHhhccccceeecchhHHHHHh----------cCCc-ccchhhHHHHHhhhhhhhhccchhhh
Q 046386 380 SARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQSL----------GESS-RTTTLLTLYSSFSFFGRLLSAAPDYM 448 (609)
Q Consensus 380 ~~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~al----------~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l 448 (609)
.+++...+++--.+++..+++. ++.-.|+. +.+. +++.+-++...--.+|-++.|. .+
T Consensus 200 a~~~~~~~~~a~~f~~fl~l~t---------~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~--~l 268 (403)
T PF03209_consen 200 AWRQVWASPQARRFFVFLFLGT---------LAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGF--LL 268 (403)
T ss_pred HHHHHHhCCChhHHHHHHHHHH---------HHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH--Hh
Confidence 3455666777666666555543 22333443 2221 2333444444444444444442 22
Q ss_pred hhhcccchhHHHHHHHHHHHHHHHHHH-hcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhh
Q 046386 449 RAKVYFARTGWLTIALLPTPVAFCLLA-TSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPI 527 (609)
Q Consensus 449 ~~~~~~~R~~~l~~~~~~~~~~~ll~~-~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~ 527 (609)
.++.+..|...+-+.....+...++++ ..+++..|..+..++|++.|..-.-.-+.+-|+=..++=|+-=|.--.+-++
T Consensus 269 ~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~ 348 (403)
T PF03209_consen 269 SRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAI 348 (403)
T ss_pred cCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHH
Confidence 334444444322222222222222222 3566788999999999999987777777777777777777655555444555
Q ss_pred HHHHHHHHHHHHhhcc
Q 046386 528 GSLVYGFLAAIVYDSN 543 (609)
Q Consensus 528 gs~~~~~i~g~iyD~~ 543 (609)
+.-++..+.|-+.|--
T Consensus 349 A~Glg~~~GG~~~D~~ 364 (403)
T PF03209_consen 349 ARGLGTFLGGALRDLV 364 (403)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5555666677777764
No 209
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=94.29 E-value=0.19 Score=56.88 Aligned_cols=136 Identities=19% Similarity=0.227 Sum_probs=97.8
Q ss_pred hHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHH-HHHHHhhhcchhhhHHHHH
Q 046386 428 LTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAG-TSLIGLSSGFIFAAAVSIT 505 (609)
Q Consensus 428 VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~-s~liG~~yG~~f~~~P~i~ 505 (609)
++.+.-......+++| ++-.+.+|++. |...++-. ++.++++++.....+...+++. ..+.|++.|..+.-...++
T Consensus 83 ~~~i~sl~~~~~~~~gpl~s~l~~rfg~-R~v~i~G~-~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv 160 (509)
T KOG2504|consen 83 IAWIGSLLLGVYLLAGPLVSALCNRFGC-RTVMIAGG-LVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVIL 160 (509)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHhhcCc-hHHHHHHH-HHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhh
Confidence 4444433444555555 56677788874 44344433 3556666665534444445554 7778999999999999999
Q ss_pred HHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHH
Q 046386 506 SELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASV 585 (609)
Q Consensus 506 se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl 585 (609)
...|- |+=+.-=|+...+.++|..+++.+--++.|..+ .|.++++.+++++-.++..+
T Consensus 161 ~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G---------------------~r~~~l~~~~~~l~~~~~~~ 218 (509)
T KOG2504|consen 161 GTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYG---------------------WRGALLIFGGISLNVLVAGA 218 (509)
T ss_pred hhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhC---------------------cHHHHHHHHHHHHHHHHHHH
Confidence 98888 888889999999999999999999989999876 88999998888865555555
Q ss_pred HH
Q 046386 586 LL 587 (609)
Q Consensus 586 ~l 587 (609)
.+
T Consensus 219 ~~ 220 (509)
T KOG2504|consen 219 LL 220 (509)
T ss_pred Hc
Confidence 44
No 210
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=94.26 E-value=0.2 Score=54.31 Aligned_cols=108 Identities=18% Similarity=0.206 Sum_probs=73.6
Q ss_pred hhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHH
Q 046386 427 LLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSIT 505 (609)
Q Consensus 427 ~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~ 505 (609)
.=|.+++.-++.-..+| .||...| |+ .+++..+..++..++.+...+-..+.++=.+.|+..| ..++.=+++
T Consensus 73 lGSsF~ilQ~~sS~~~G~~SD~yGR-----kp-vll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v~rAii 145 (451)
T KOG2615|consen 73 LGSSFSILQFISSPLWGCLSDRYGR-----KP-VLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSVIRAII 145 (451)
T ss_pred HhhHHHHHHHHhhhhhhhhhhhhCc-----hH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHHHHHHH
Confidence 44566666666556667 6777643 33 3333333344444444422222233333455566555 789999999
Q ss_pred HHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhh
Q 046386 506 SELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYD 541 (609)
Q Consensus 506 se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD 541 (609)
+|++-.|+-+.--+.+-+++.+|-.++|+|.|++-.
T Consensus 146 sdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 146 SDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 999999999999999999999999999999998866
No 211
>PRK10133 L-fucose transporter; Provisional
Probab=94.25 E-value=0.27 Score=54.27 Aligned_cols=144 Identities=17% Similarity=0.196 Sum_probs=83.8
Q ss_pred HHHHHHHHHHhhccccceeec-chhHHHHHhcCCc-ccchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHH
Q 046386 389 DFWLYYIAYFCGGAIGLVYSN-NLGQIAQSLGESS-RTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLP 466 (609)
Q Consensus 389 ~Fwll~~~~~~g~g~Glm~I~-n~g~I~~al~~~~-~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~ 466 (609)
.|++++++++.-+ ...+.++ -..++.++++.+. .....++.+.+...++-+..| .+.+|++++|. +.+.+++
T Consensus 27 ~~~~~~~~~~~~~-~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g---~l~dr~G~r~~--l~~g~~~ 100 (438)
T PRK10133 27 PFALLCSLFFLWA-VANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAG---ILMKKLSYKAG--IITGLFL 100 (438)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhCcHHH--HHHHHHH
Confidence 4556555554422 2222222 2334444455532 233455555555555555555 56666654444 3344445
Q ss_pred HHHHHHHH---HhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchh-hhhHHHhhhhhHHHHHHHHHHHH
Q 046386 467 TPVAFCLL---ATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGV-NHNILITNIPIGSLVYGFLAAIV 539 (609)
Q Consensus 467 ~~~~~ll~---~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~-nyg~~~~a~~~gs~~~~~i~g~i 539 (609)
.+++.++. ...++...+.+.-.+.|++.|..+....+++.|. +.++-+. .-++....+.+|..+++.+.+.+
T Consensus 101 ~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~-~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 101 YALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVL-GPESSGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-CChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555443 2234455677778899999999999999999986 4555553 45666777777877777665544
No 212
>PRK09848 glucuronide transporter; Provisional
Probab=94.15 E-value=0.47 Score=52.16 Aligned_cols=117 Identities=15% Similarity=0.081 Sum_probs=60.9
Q ss_pred HHHhCCChhhhhHHHHhhhcccc-hhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhc
Q 046386 66 KSVLGVSQVQLNYLATASDLGKL-FGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYILVFFLCLLSGL 144 (609)
Q Consensus 66 k~~L~~sq~qln~I~~a~~lG~~-~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l~~~~~l~G~ 144 (609)
++.+|.+..+.-.+.....++.. ...+.+.+.+..+...+..+|.++..+|+...+.. . ..+.|.++...++.|.
T Consensus 256 ~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~--~--~~~~~~~~~~~~l~g~ 331 (448)
T PRK09848 256 RYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWV--S--VWSLPVALVALAIASI 331 (448)
T ss_pred eeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc--C--chhHHHHHHHHHHHHH
Confidence 55677766553333333233332 23445666666666666777777777787665432 1 1224555555556666
Q ss_pred chhhhhhHHHHHHHHhcC--------CCCcchhhhhhhhhhhhHHHHHHH
Q 046386 145 SITWFNTVCFVLCIQNFP--------ANRALALSLTVSFNGVSAAIYALA 186 (609)
Q Consensus 145 g~~~~~taalvT~~kNFP--------~~RG~avgl~k~~~GLSaaI~s~i 186 (609)
|.+..........+..=| +++|...|+.--..-+++++...+
T Consensus 332 G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i 381 (448)
T PRK09848 332 GQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSI 381 (448)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHH
Confidence 655544443333233222 234777776555544555444433
No 213
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=94.04 E-value=0.76 Score=49.62 Aligned_cols=114 Identities=18% Similarity=0.204 Sum_probs=81.9
Q ss_pred hhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhh
Q 046386 446 DYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNI 525 (609)
Q Consensus 446 D~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~ 525 (609)
-.+.||++..|..+.. +++.+++.++=. ......++.++.++|.+-+..--+.|+++-+.|+ |+-+..=|+-.++-
T Consensus 68 ~~Lar~~g~er~l~~~--Llli~~G~~iR~-~~~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl 143 (395)
T COG2807 68 PRLARRFGEERSLFLA--LLLIAAGILIRS-LGGLPLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSL 143 (395)
T ss_pred HHHHHHHhhHHHHHHH--HHHHHHHHHHHh-cccHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHH
Confidence 4677888777775433 344455555543 3345679999999999999999999999999999 88887777777766
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHH
Q 046386 526 PIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAA 583 (609)
Q Consensus 526 ~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~ 583 (609)
.+|+-+.+.++--+-.+.. --|.+..+++..+++++++
T Consensus 144 ~~~aaLaa~lavpla~~~~--------------------gW~~aL~~WAl~allAl~~ 181 (395)
T COG2807 144 GAGAALAAALAVPLAQHSG--------------------GWRGALGFWALLALLALLI 181 (395)
T ss_pred HHHHHHHhhhhhHHHHhhc--------------------cHHHHHHHHHHHHHHHHHH
Confidence 6766666544434433321 4889999999998866554
No 214
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=93.35 E-value=0.64 Score=51.03 Aligned_cols=159 Identities=17% Similarity=0.117 Sum_probs=102.3
Q ss_pred hHHHHhhhHHHHHHHHHHHhhccccceeecchhHHHHH--hcCCccc-chhhHHHHHhhhhhhhhccchhhhhhhcccch
Q 046386 380 SARLLVLRLDFWLYYIAYFCGGAIGLVYSNNLGQIAQS--LGESSRT-TTLLTLYSSFSFFGRLLSAAPDYMRAKVYFAR 456 (609)
Q Consensus 380 ~~~~~l~~~~Fwll~~~~~~g~g~Glm~I~n~g~I~~a--l~~~~~~-~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R 456 (609)
|.++.-+..+.-.+.++.++-. -|+..|.-+|-+.-+ ++.++.. -.+--..++.-.+|-++.| ++-+|++.++
T Consensus 244 t~k~i~~~~~i~~FLiA~~~~~-DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g---~Ld~rfg~k~ 319 (438)
T COG2270 244 TFKEIRGRKNLVLFLIARFFYI-DGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAG---FLDERFGSKP 319 (438)
T ss_pred HHHHHhcccchHHHHHHHHHHH-hhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhCCce
Confidence 5566655556655555444322 455555555554433 3332211 1122233444556666666 6666776554
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHH
Q 046386 457 TGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLA 536 (609)
Q Consensus 457 ~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~ 536 (609)
.....+. +..+..+.......+..+++...++|++.|+..+..=+..+++.=.+.-+.-+|+-.+.-=.++.+++.+.
T Consensus 320 vl~~~lv--i~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv 397 (438)
T COG2270 320 VLMIGLV--ILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLV 397 (438)
T ss_pred eehHHHH--HHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHH
Confidence 4333332 22223332222455677899999999999999999999999999999999999999887777888899999
Q ss_pred HHHhhccC
Q 046386 537 AIVYDSNV 544 (609)
Q Consensus 537 g~iyD~~~ 544 (609)
|.+-|-.+
T Consensus 398 ~v~t~iTg 405 (438)
T COG2270 398 AVITQITG 405 (438)
T ss_pred HHHHHHhc
Confidence 98888776
No 215
>PF13347 MFS_2: MFS/sugar transport protein
Probab=93.11 E-value=0.11 Score=56.68 Aligned_cols=149 Identities=17% Similarity=0.097 Sum_probs=86.7
Q ss_pred hhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhc-C--C-c--c--hhHHHHHHHHhhhcch
Q 046386 427 LLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATS-G--N-A--V--ALQAGTSLIGLSSGFI 497 (609)
Q Consensus 427 ~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~-~--~-~--~--~l~~~s~liG~~yG~~ 497 (609)
...+..+++.+-=.+.| +||....|+++.|++ +.+..++.++++.++... + . . . .+.+...+..++|-..
T Consensus 42 i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~-~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~ 120 (428)
T PF13347_consen 42 ILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPW-ILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFV 120 (428)
T ss_pred HHHHHHHhhhhcCCcEEEEEeeecccccccceE-eehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhc
Confidence 34444555555555668 799888888877774 444455666666555422 2 0 0 1 1344455556666666
Q ss_pred hhhHHHHHHHhhCC-CCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHH
Q 046386 498 FAAAVSITSELFGP-NSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCV 576 (609)
Q Consensus 498 f~~~P~i~se~FG~-k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~ 576 (609)
..-+=++..|+-.. ++-....+.-.....+|..+.+.+.+.+.+..++.+.. +-|+....+.+.+
T Consensus 121 ~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~--------------~~~~~~~~v~~iv 186 (428)
T PF13347_consen 121 QIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTS--------------NGYRWMALVLAIV 186 (428)
T ss_pred cCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccc--------------hHHHHHHHHHHHH
Confidence 66666677777653 33445555554455566665666666666554432211 1488888887777
Q ss_pred HHHHHHHHHHHHHH
Q 046386 577 SVVGLAASVLLFLR 590 (609)
Q Consensus 577 ~~~~~~~sl~l~~r 590 (609)
+++...++....+.
T Consensus 187 ~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 187 GLVFFLITFFFVKE 200 (428)
T ss_pred HHHHhhhhhheeee
Confidence 77666666655444
No 216
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=91.58 E-value=2.8 Score=46.94 Aligned_cols=114 Identities=16% Similarity=0.125 Sum_probs=65.8
Q ss_pred cchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcC--CcchhHHHHHHHHhhhcchhhh
Q 046386 424 TTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSG--NAVALQAGTSLIGLSSGFIFAA 500 (609)
Q Consensus 424 ~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~--~~~~l~~~s~liG~~yG~~f~~ 500 (609)
.....++....++.+=+++- +--.+.+|++.++.+.+. .++.+++.+++...+ +...+++..++.++.+|....+
T Consensus 270 ~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~--~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l 347 (467)
T COG2211 270 PELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIG--LLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPL 347 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHH--HHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccc
Confidence 33445555555555555532 334677777755554433 334444444433233 2344455557878888888888
Q ss_pred HHHHHHHh-------hCCCCchhhhhHHHhhhhhHHHHHHHHHHHH
Q 046386 501 AVSITSEL-------FGPNSVGVNHNILITNIPIGSLVYGFLAAIV 539 (609)
Q Consensus 501 ~P~i~se~-------FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~i 539 (609)
..+.++|. =|.+.=|..|+.+...-=+|..+++.+.|.+
T Consensus 348 ~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~ 393 (467)
T COG2211 348 PWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWI 393 (467)
T ss_pred cHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888775 3778888899988554444444444333333
No 217
>PRK10429 melibiose:sodium symporter; Provisional
Probab=90.25 E-value=2.7 Score=46.77 Aligned_cols=49 Identities=16% Similarity=0.140 Sum_probs=31.6
Q ss_pred hhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 046386 426 TLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLA 475 (609)
Q Consensus 426 ~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~ 475 (609)
....+..+|..+.=.+.| +||....|++..|+| +.+...++++++.++.
T Consensus 46 ~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~-il~g~i~~~i~~~llf 95 (473)
T PRK10429 46 TLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPW-ILIGTLANSVVLFLLF 95 (473)
T ss_pred HHHHHHHHHHHHhhchheeehhcCCCCCCCcchh-HhhhhHHHHHHHHHHH
Confidence 345555666666666688 799988888877885 4444455566654443
No 218
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=89.85 E-value=2.8 Score=47.03 Aligned_cols=131 Identities=22% Similarity=0.304 Sum_probs=95.3
Q ss_pred hhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHH---HhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhC
Q 046386 435 SFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLL---ATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFG 510 (609)
Q Consensus 435 n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~---~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG 510 (609)
-+.|.+++- -+.++.+|++.+|..... .++.+++-++. +..+ ...+.+.=.+.|+++|..|..+..+++.+.-
T Consensus 82 ~~~G~i~~~iP~g~l~~k~G~r~v~~~~--~~~sa~~t~l~P~aa~~~-~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P 158 (466)
T KOG2532|consen 82 FFWGYILGQIPGGYLADKFGARRVFFIS--GLISALLTLLTPLAASIG-FYLLLVLRFLQGLGQGVLFPAIGSILAKWAP 158 (466)
T ss_pred HHHHHHHHHcCcHHHHHHcCchHHHHHH--HHHHHHHHHHHHHHHHhc-chhhHHHHHHhHHHHhHHHhhhhceeeeECC
Confidence 345666653 245888888866654322 22333333332 2222 2356777899999999999999999999999
Q ss_pred CCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 046386 511 PNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLLF 588 (609)
Q Consensus 511 ~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l~ 588 (609)
.++-++-.+++.++.-+|..+.-.++|.+=++.- --+..|++.++++++..++=.++.
T Consensus 159 ~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~--------------------GW~sifY~~g~~g~i~~~~w~~~~ 216 (466)
T KOG2532|consen 159 PNERSTFIAILTAGSQLGTIITMPVSGLLCESSL--------------------GWPSIFYVFGIVGLIWFILWFLFY 216 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCC--------------------CCchHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999988888888887778998877722 378999999998887776655554
No 219
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=89.69 E-value=1.2 Score=47.83 Aligned_cols=102 Identities=18% Similarity=0.202 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHH--HhcCCc-------chhHHHHHHHHhhhcchhhhHHHHHHHhhCCCC---chhhhhHHHhhhhh
Q 046386 460 LTIALLPTPVAFCLL--ATSGNA-------VALQAGTSLIGLSSGFIFAAAVSITSELFGPNS---VGVNHNILITNIPI 527 (609)
Q Consensus 460 l~~~~~~~~~~~ll~--~~~~~~-------~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~---fg~nyg~~~~a~~~ 527 (609)
+.+..++..++++++ +..+.. ..++++-.+++++.|+.=+..++..+|.|-.++ -..-|++...+.-+
T Consensus 4 I~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~ 83 (372)
T PF00854_consen 4 ILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINI 83 (372)
T ss_dssp HHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhh
Confidence 344455667787774 222222 468999999999999999999999999999653 23345566677888
Q ss_pred HHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHH
Q 046386 528 GSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLA 582 (609)
Q Consensus 528 gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~ 582 (609)
|+++...+.+++-|+. +|...|.+.++..+++++
T Consensus 84 G~~~~~~~~~~i~~~~---------------------~~~~~f~i~~~~~~~~~~ 117 (372)
T PF00854_consen 84 GSLFSPTLVPYIQQNY---------------------GWFLGFGIPAIGMLLALI 117 (372)
T ss_dssp HHHHHHHCCCHHHHCS----------------------HHHHHHHHHHHHHHHHH
T ss_pred hhHhhcccchhhcccc---------------------chhhhhhHHHHHHHHHHH
Confidence 9988887777777554 599999877665554444
No 220
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=89.14 E-value=2.4 Score=47.28 Aligned_cols=156 Identities=18% Similarity=0.266 Sum_probs=86.0
Q ss_pred hhhHHHH-Hhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHH---hcCCc----chhHHHHHHHHhhhcc
Q 046386 426 TLLTLYS-SFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLA---TSGNA----VALQAGTSLIGLSSGF 496 (609)
Q Consensus 426 ~~VSl~S-i~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~---~~~~~----~~l~~~s~liG~~yG~ 496 (609)
..|.-.+ +-|.+|.++.| +.|++.||+..... +++|.++-.+.. ..+.+ ..+..-=.++|++-|+
T Consensus 87 ~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~------liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGG 160 (538)
T KOG0252|consen 87 ALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKE------LIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGG 160 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHH------HHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccC
Confidence 3444443 34888999999 68888766543322 223333332222 11222 2233334678999999
Q ss_pred hhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHH---HHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHH
Q 046386 497 IFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYG---FLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLW 573 (609)
Q Consensus 497 ~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~---~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~ 573 (609)
=+.+-.+|+||.=-.|.=|+.-+.++..-++|-+.++ .+.-..+++. |.++.||+..=.+|
T Consensus 161 DYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~----------------~~~~~~~~~ld~vW 224 (538)
T KOG0252|consen 161 DYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKI----------------FNGPSTYPHLDGVW 224 (538)
T ss_pred CCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhcc----------------CCCCCCchHHHHHH
Confidence 9999999999976666666655555443333333322 2222344433 33334666665665
Q ss_pred HHHHHHHHHHHH-HHHHHH----hhhHHHHHhhhc
Q 046386 574 GCVSVVGLAASV-LLFLRT----RHAYDCFERKRL 603 (609)
Q Consensus 574 a~~~~~~~~~sl-~l~~r~----r~~y~~~~~~~~ 603 (609)
=..-.+|++-++ .+++|- .++|..+..|..
T Consensus 225 Rl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~ 259 (538)
T KOG0252|consen 225 RIIFGLGAVPALLVLYFRLKMPETARYTALVSKKL 259 (538)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCH
Confidence 444444444433 344553 367887766553
No 221
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=87.93 E-value=8 Score=40.62 Aligned_cols=114 Identities=16% Similarity=0.175 Sum_probs=69.7
Q ss_pred hCCChhhhhHHHHhhhcccch-hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhcchh
Q 046386 69 LGVSQVQLNYLATASDLGKLF-GWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYILVFFLCLLSGLSIT 147 (609)
Q Consensus 69 L~~sq~qln~I~~a~~lG~~~-G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~ 147 (609)
+|++.++....-...-.|+.+ .+..+.+.+++.+..++.++..+..++..+.+.. .+ .+.+ ...++.|.+.+
T Consensus 173 ~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~-~~-----~~~~-~~~~l~g~~~s 245 (310)
T TIGR01272 173 LGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALT-HG-----YVAM-WFVLALGLFNS 245 (310)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc-CC-----HHHH-HHHHHHHHHHH
Confidence 689988876664444444433 3444777777755555666666666665443321 11 1111 12334566666
Q ss_pred hhhhHHHHHHHHhcCCCCcchhhhhhhhhhhhHHHHHHHHhhh
Q 046386 148 WFNTVCFVLCIQNFPANRALALSLTVSFNGVSAAIYALAGNAI 190 (609)
Q Consensus 148 ~~~taalvT~~kNFP~~RG~avgl~k~~~GLSaaI~s~i~~~~ 190 (609)
..+-.......+.+|++.|.+.++. ++-.+.+++...+.-.+
T Consensus 246 ~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~l 287 (310)
T TIGR01272 246 IMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSL 287 (310)
T ss_pred HHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHH
Confidence 6777777788899999988888885 45557777776654433
No 222
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=87.41 E-value=4.1 Score=38.82 Aligned_cols=65 Identities=12% Similarity=0.268 Sum_probs=46.8
Q ss_pred cCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhh
Q 046386 477 SGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYD 541 (609)
Q Consensus 477 ~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD 541 (609)
.++...++.++++.|++.+.+|.---.++.+.-=.++.+.|-|+.......+..+++.+.-.++.
T Consensus 86 ~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 86 YPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred hhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45567789999999999999999999998888777777777766544444444555544333333
No 223
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=86.81 E-value=15 Score=40.99 Aligned_cols=52 Identities=13% Similarity=0.168 Sum_probs=34.2
Q ss_pred hhHHHHHHHHHhhcchhhhhhHHHHHHHHhcCCCCcchhhhhhhhhhhhHHHHHHH
Q 046386 131 PYILVFFLCLLSGLSITWFNTVCFVLCIQNFPANRALALSLTVSFNGVSAAIYALA 186 (609)
Q Consensus 131 ~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP~~RG~avgl~k~~~GLSaaI~s~i 186 (609)
.++..++..++.|.+.+.. ..++..-+..||++ -++....+.|+||.+-+.+
T Consensus 105 ~f~~~~~~v~~~g~~~~~~-q~s~~gla~~fp~~---~~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALL-QGSLFGLAGVFPST---YSSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred HHHHHHHHHHHHHhhhhhh-cccchhhcccCCHH---HHHHHHhcchhHHHHHHHH
Confidence 3555555666677766544 34456678899953 4566667788888886655
No 224
>PRK11462 putative transporter; Provisional
Probab=84.72 E-value=7.6 Score=43.17 Aligned_cols=49 Identities=14% Similarity=0.062 Sum_probs=30.9
Q ss_pred hhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 046386 426 TLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLA 475 (609)
Q Consensus 426 ~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~ 475 (609)
+...+--+|.++-=.+.| +||....|+++.|+|. .+..+++++.+.++.
T Consensus 49 ~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~i-l~g~i~~~i~~~llf 98 (460)
T PRK11462 49 TMFLVARALDAISDPCMGLLADRTRSRWGKFRPWV-LFGALPFGIVCVLAY 98 (460)
T ss_pred HHHHHHHHHHHHHhhhheehhccCCCCCCCcchhH-hHHHHHHHHHHHHHH
Confidence 344444455555556678 7999888888888854 444456666555443
No 225
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=83.72 E-value=51 Score=37.29 Aligned_cols=57 Identities=18% Similarity=0.329 Sum_probs=46.8
Q ss_pred HHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccC
Q 046386 488 SLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNV 544 (609)
Q Consensus 488 ~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~ 544 (609)
...|.++=.......++-|++.|.++.|+-.|++...-.++.++++.+.-.+|...+
T Consensus 396 ~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g 452 (488)
T KOG2325|consen 396 VVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSG 452 (488)
T ss_pred heeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcC
Confidence 344555555566678899999999999999999999888999999988888887765
No 226
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=83.32 E-value=24 Score=39.79 Aligned_cols=159 Identities=17% Similarity=0.185 Sum_probs=88.3
Q ss_pred ccchhhhhhhcccCCchHHHHHHHHHHHHhcCCccccccccHHHHHHhCCChhhhhHHHHhhhcccch-hhhhhhhhhhh
Q 046386 22 YRTLIHLFFLMAGQSRKWMILVATIWIQAFTGTNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKLF-GWLSGLALMYF 100 (609)
Q Consensus 22 ~~~~~~~~~~m~~~~~Rw~~lvas~~v~l~~Gt~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~-G~~sGll~~~~ 100 (609)
+|.+.+.+--.++.+.=+.-|++-++.. .|.+..++...-=.++.+|+|++|+..++...++-... +++.|.+.+++
T Consensus 267 ~~~l~~t~k~~~~~~~~~~fLia~~l~~--dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~ 344 (477)
T PF11700_consen 267 FKRLWRTFKEIRKLRQLFLFLIAYFLYS--DGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF 344 (477)
T ss_pred HHHHHHHHHHHHhChHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4444444433232222233444444433 44444444444555679999999999999999986633 44557777776
Q ss_pred hHH--HHHHHH----HHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcCCCCcchhhhhhh
Q 046386 101 PLW--VVLFMA----AFMGFFGYGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFPANRALALSLTVS 174 (609)
Q Consensus 101 P~~--~vllig----~~~~~~GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP~~RG~avgl~k~ 174 (609)
.+. -+++++ .+....|+...+....+ ..+-|.++.+.++.|..++..++++=..-.+-=|+.|- +---+
T Consensus 345 g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g--~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e---~efFg 419 (477)
T PF11700_consen 345 GPKTKRTLLISLILWIIIPLYGLFGFWPSFFG--LKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGRE---AEFFG 419 (477)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhcccC--cccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchh---hHHHH
Confidence 443 222221 12222222222111111 12347777777888888887788777777778887664 55555
Q ss_pred hhhhhHHHHHHHH
Q 046386 175 FNGVSAAIYALAG 187 (609)
Q Consensus 175 ~~GLSaaI~s~i~ 187 (609)
.|++++..-+-+.
T Consensus 420 ly~i~gk~ss~lG 432 (477)
T PF11700_consen 420 LYAITGKASSWLG 432 (477)
T ss_pred HHHHHHHHHHHHH
Confidence 6666655544443
No 227
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=83.30 E-value=0.19 Score=55.67 Aligned_cols=88 Identities=15% Similarity=0.129 Sum_probs=65.6
Q ss_pred chhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCccc
Q 046386 481 VALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVC 560 (609)
Q Consensus 481 ~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C 560 (609)
..+.+.=.++|++--..-.+.|++++|.|--.+=|.-+|+...+.|+|+-++-.+.+.+-+.+.
T Consensus 122 wq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~---------------- 185 (493)
T KOG1330|consen 122 WQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF---------------- 185 (493)
T ss_pred HHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc----------------
Confidence 4456667889999999999999999999999999999999999999997665433333333322
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHH
Q 046386 561 MGRHCYFLTFVLWGCVSVVGLAASVLLF 588 (609)
Q Consensus 561 ~G~~Cy~~tF~i~a~~~~~~~~~sl~l~ 588 (609)
--|.+|.+.+++.++..++..+..
T Consensus 186 ----~Wr~af~~~avl~vi~~~L~~~f~ 209 (493)
T KOG1330|consen 186 ----WWRWAFRGSAVLGVIVGLLVFLFV 209 (493)
T ss_pred ----ceEEEEEeehHHHHHHHHHHHhhc
Confidence 156667777777766665555543
No 228
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=83.07 E-value=8.7 Score=43.04 Aligned_cols=150 Identities=19% Similarity=0.256 Sum_probs=96.9
Q ss_pred CchHHHHHHHHHHHHhcCCccccccccHHHHHHhCCChhhhhHHHHhhhcccch-hhhhhhhhhhh-------hHHHHHH
Q 046386 36 SRKWMILVATIWIQAFTGTNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKLF-GWLSGLALMYF-------PLWVVLF 107 (609)
Q Consensus 36 ~~Rw~~lvas~~v~l~~Gt~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~-G~~sGll~~~~-------P~~~vll 107 (609)
..+++.+.+=++.-...-+.+-.++|-..+.-..+.+....- +-....+|... .+..|++...+ ..+...+
T Consensus 238 ~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~-~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~ 316 (461)
T KOG3098|consen 238 KTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTY-LIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVL 316 (461)
T ss_pred cCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchh-HHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchh
Confidence 445666666555555566677788888887765433333322 22222222211 22224433333 3345667
Q ss_pred HHHHHHHHHHHHHHHHHhhcCc------------chhHHHHHHHHHhhcchhhhhhHHHHHHHHhcCCCCcchhhhhhhh
Q 046386 108 MAAFMGFFGYGLQWLVISHVIS------------LPYILVFFLCLLSGLSITWFNTVCFVLCIQNFPANRALALSLTVSF 175 (609)
Q Consensus 108 ig~~~~~~GY~~~~l~~~~~~~------------~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP~~RG~avgl~k~~ 175 (609)
+|..+...++.+..+......+ +.+-....+.++.|.|-+..+|...+.|..-+|++|-.+-++.|-+
T Consensus 317 ~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~fsi~kfy 396 (461)
T KOG3098|consen 317 IGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYPDDRAQAFSLFKFY 396 (461)
T ss_pred HHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHH
Confidence 8888887888777776543221 1244455566888999999999999999999999999999999999
Q ss_pred hhhhHHHHHHH
Q 046386 176 NGVSAAIYALA 186 (609)
Q Consensus 176 ~GLSaaI~s~i 186 (609)
.++.+.+....
T Consensus 397 q~~~s~v~~f~ 407 (461)
T KOG3098|consen 397 QSVASCVAFFF 407 (461)
T ss_pred HHHHHHHHhhh
Confidence 99988774444
No 229
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=82.88 E-value=0.12 Score=56.50 Aligned_cols=104 Identities=22% Similarity=0.231 Sum_probs=68.4
Q ss_pred hHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcC---CcchhHHHHHHHHhhhcchhhhHHH
Q 046386 428 LTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSG---NAVALQAGTSLIGLSSGFIFAAAVS 503 (609)
Q Consensus 428 VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~---~~~~l~~~s~liG~~yG~~f~~~P~ 503 (609)
.++....-++|++++. +.-++.||+++++ .+.+..+++.++.++....+ +...+.++-.+.|++.|+...+.|.
T Consensus 48 ~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~ 125 (451)
T PF00083_consen 48 SSLLTSSFFIGAIVGALIFGFLADRYGRKP--ALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPI 125 (451)
T ss_pred HHHHHHHHHhhhcccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3333334445554432 2234444444333 33333344455555544344 6777888899999999999999999
Q ss_pred HHHHhhCCCCchhhhhHHHhhhhhHHHHHH
Q 046386 504 ITSELFGPNSVGVNHNILITNIPIGSLVYG 533 (609)
Q Consensus 504 i~se~FG~k~fg~nyg~~~~a~~~gs~~~~ 533 (609)
++.|.=..|+=|..-.+..+++.+|..+..
T Consensus 126 ~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~ 155 (451)
T PF00083_consen 126 YISEIAPPKHRGFLSSLFQLFWALGILLAS 155 (451)
T ss_pred cccccccccccccccccccccccccccccc
Confidence 999999998888888888777777766654
No 230
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=82.57 E-value=10 Score=36.94 Aligned_cols=112 Identities=24% Similarity=0.244 Sum_probs=69.4
Q ss_pred chhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCC--cchhHHHHHHHHhhhcchhhhH
Q 046386 425 TTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGN--AVALQAGTSLIGLSSGFIFAAA 501 (609)
Q Consensus 425 ~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~--~~~l~~~s~liG~~yG~~f~~~ 501 (609)
....+...+...++.+..| ++|...+ +|. +........++.++.....+ ...+.+...+.|++.|......
T Consensus 42 ~~~~~~~~~~~~~~~~~~g~l~d~~g~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 115 (338)
T COG0477 42 GLLLSAFFLGYAIGSLLAGPLGDRYGR----RKV--LIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVA 115 (338)
T ss_pred HHHHHHHHHHHHHHhhhhhhccccccc----hHH--HHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHH
Confidence 3455566666666666666 5666522 222 22222112222222222222 3445555666899999999999
Q ss_pred HHHHHHhhCC-CCchhhhhHHHh-hhhhHHHHHHHHHHHHhhc
Q 046386 502 VSITSELFGP-NSVGVNHNILIT-NIPIGSLVYGFLAAIVYDS 542 (609)
Q Consensus 502 P~i~se~FG~-k~fg~nyg~~~~-a~~~gs~~~~~i~g~iyD~ 542 (609)
.++++|.+.. ++.+...+.... ...+|..+++.+.+.+.+.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 116 SALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999997 577888888766 4666777777777777776
No 231
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=80.78 E-value=7.3 Score=42.78 Aligned_cols=155 Identities=15% Similarity=0.089 Sum_probs=107.1
Q ss_pred cchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHH---hcCCcchhHHHHHHHHhhhcchhh
Q 046386 424 TTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLA---TSGNAVALQAGTSLIGLSSGFIFA 499 (609)
Q Consensus 424 ~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~---~~~~~~~l~~~s~liG~~yG~~f~ 499 (609)
.....|++-.+-+.|=...+ -+.++.+|++.+|.. ++.+.+++++..++. ...+-..+..+-.++|.+-|.+=+
T Consensus 46 s~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi--~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~Let 123 (422)
T COG0738 46 TYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGI--VLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLET 123 (422)
T ss_pred cHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHH--HHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHh
Confidence 34567888888888888887 478999998877764 444556777777763 333345556666778888898888
Q ss_pred hHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCccccc--ccccHHHHHHHHHHH
Q 046386 500 AAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMG--RHCYFLTFVLWGCVS 577 (609)
Q Consensus 500 ~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G--~~Cy~~tF~i~a~~~ 577 (609)
..=+.++.+.-.++=...-|++..-+++|+.+++.+.+.+-+++.. ++.. ......-.+ ..-.+..|+++++++
T Consensus 124 aaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~-~~~~---~~~~~~~~~~~~~~v~~pYl~~~~~l 199 (422)
T COG0738 124 AANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVA-LTMS---AAQILAIKGADASSVQFPYLILAGLL 199 (422)
T ss_pred ccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhh-hccC---HHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 8889999998887778888999999999999999999988886411 1000 000001112 113788888887776
Q ss_pred HHHHHHH
Q 046386 578 VVGLAAS 584 (609)
Q Consensus 578 ~~~~~~s 584 (609)
++-.+..
T Consensus 200 vll~v~~ 206 (422)
T COG0738 200 VLLAVLI 206 (422)
T ss_pred HHHHHHH
Confidence 5444433
No 232
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=80.76 E-value=18 Score=39.81 Aligned_cols=148 Identities=11% Similarity=0.032 Sum_probs=89.2
Q ss_pred hhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHH----hcCC-------c-----chhHHHHH
Q 046386 426 TLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLA----TSGN-------A-----VALQAGTS 488 (609)
Q Consensus 426 ~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~----~~~~-------~-----~~l~~~s~ 488 (609)
.+|++--... .-|...| .||.-..-++.+|+-|+..-.++++.+..+.. ..+. + ....++..
T Consensus 19 ~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~ 97 (403)
T PF03209_consen 19 LLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFL 97 (403)
T ss_pred HHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHH
Confidence 3444433333 3599999 69985434566677666655545443322221 1111 2 23345577
Q ss_pred HHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHH
Q 046386 489 LIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFL 568 (609)
Q Consensus 489 liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~ 568 (609)
++|++.+.-=+.+-++.+|+=..|+=+..=+++-+.--+|-.+...++|+.-|... ...
T Consensus 98 l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s---------------------~~r 156 (403)
T PF03209_consen 98 LYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFS---------------------PER 156 (403)
T ss_pred HHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccC---------------------HHH
Confidence 88999998889999999999998888777666655444555666666777777653 222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhH
Q 046386 569 TFVLWGCVSVVGLAASVLLFLRTRHAY 595 (609)
Q Consensus 569 tF~i~a~~~~~~~~~sl~l~~r~r~~y 595 (609)
-..+...++++.++++++-.|+.-+++
T Consensus 157 L~~v~~~~a~i~~~l~~ia~wg~E~r~ 183 (403)
T PF03209_consen 157 LIQVIQGVALIALLLNLIALWGQEPRR 183 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 233445555666667666666554333
No 233
>PRK03612 spermidine synthase; Provisional
Probab=79.57 E-value=28 Score=39.65 Aligned_cols=57 Identities=23% Similarity=0.286 Sum_probs=36.3
Q ss_pred hHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHh
Q 046386 483 LQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVY 540 (609)
Q Consensus 483 l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iy 540 (609)
++....+.+++-|+.+.+.--+..+. ..++.|.+-|-+..+.-+|+.++++++|.+-
T Consensus 113 ~~~~~~~~~~l~G~~~Pl~~~~~~~~-~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vL 169 (521)
T PRK03612 113 LYVLVLLIGLLIGMEIPLLMRILQRI-RDQHLGHNVATVLAADYLGALVGGLAFPFLL 169 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-cccchhhhhhhhHhHHhHHHHHHHHHHHHHH
Confidence 34456677888888866666555443 2245666666666677777777777766543
No 234
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=78.46 E-value=78 Score=32.58 Aligned_cols=142 Identities=16% Similarity=0.156 Sum_probs=72.1
Q ss_pred HHHhhccccceeec--chhHHHHHhcCCcccchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHH
Q 046386 396 AYFCGGAIGLVYSN--NLGQIAQSLGESSRTTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCL 473 (609)
Q Consensus 396 ~~~~g~g~Glm~I~--n~g~I~~al~~~~~~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll 473 (609)
.+.+...+|..|.. =..++-+.++++ ..++..++.+.-+|.-++-.+-.+.++++ ||.. +.+..+...+++.+
T Consensus 8 ~~~v~~~~Gt~Y~Fs~yS~~Lk~~l~~s---q~~l~~l~~~~~~G~~~G~~~G~l~d~~g-p~~~-l~iG~~~~~~GY~~ 82 (250)
T PF06813_consen 8 SIWVQLCSGTTYTFSAYSPQLKSRLGYS---QSQLNTLSTAGDIGSYFGILAGLLYDRFG-PWVV-LLIGAVLGFVGYGL 82 (250)
T ss_pred HHHHHHhcCcccchhhhhHHHHHHhCCC---HHHHHHHHHHHHHHhhccHHHHHHHHhcc-hHHH-HHHHHHHHHHHHHH
Confidence 33344445554443 334555556664 33466677776666654323445555554 4442 22333334455544
Q ss_pred HH--hcCC--cchhHHHHHHHHhh-hcchhhhHHH--HHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhcc
Q 046386 474 LA--TSGN--AVALQAGTSLIGLS-SGFIFAAAVS--ITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSN 543 (609)
Q Consensus 474 ~~--~~~~--~~~l~~~s~liG~~-yG~~f~~~P~--i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~ 543 (609)
+. ..+. ...++.......+. .|..|--..+ ...+.|- +|=|+-=|++-...++++.++..++..++..+
T Consensus 83 ~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~ 158 (250)
T PF06813_consen 83 LWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDD 158 (250)
T ss_pred HHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCC
Confidence 32 1111 12233333333332 3333432333 3335674 67777778887778888888887777776553
No 235
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=77.84 E-value=25 Score=39.77 Aligned_cols=80 Identities=15% Similarity=0.137 Sum_probs=48.1
Q ss_pred hhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHH-hcCCcchhHHHHHHHHhhhcchhhhHHHH
Q 046386 427 LLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLA-TSGNAVALQAGTSLIGLSSGFIFAAAVSI 504 (609)
Q Consensus 427 ~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~-~~~~~~~l~~~s~liG~~yG~~f~~~P~i 504 (609)
.||++.+.+.+|=+.++ ++|.+ +++....+...+.+.+....++. ..+....+.++-.++|++-|...++.|..
T Consensus 65 ~vs~f~iG~~~Gs~~~~~la~~~----GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmy 140 (485)
T KOG0569|consen 65 IVSIFFIGGMIGSFSSGLLADRF----GRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMY 140 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh----cchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 45555555666666666 34444 33322222222222222222222 34556778999999999999999999999
Q ss_pred HHHhhC
Q 046386 505 TSELFG 510 (609)
Q Consensus 505 ~se~FG 510 (609)
+.|.==
T Consensus 141 l~E~sP 146 (485)
T KOG0569|consen 141 LTEISP 146 (485)
T ss_pred HhhcCh
Confidence 998743
No 236
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=77.44 E-value=1.2e+02 Score=33.52 Aligned_cols=73 Identities=14% Similarity=0.203 Sum_probs=58.4
Q ss_pred HHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccC
Q 046386 472 CLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNV 544 (609)
Q Consensus 472 ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~ 544 (609)
+++.....+..+|+++.+--++--..-+..-.++...-+...=|+.=|+..+.-+++..++|.+.|.+...-.
T Consensus 344 llls~~~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~ 416 (451)
T KOG2615|consen 344 LLLSLARTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQ 416 (451)
T ss_pred HHHhccccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEec
Confidence 3333345567788888888888777777777777888888888999999999999999999999998876654
No 237
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=76.87 E-value=21 Score=39.39 Aligned_cols=119 Identities=19% Similarity=0.173 Sum_probs=78.0
Q ss_pred HHhcCCcc-cchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHHH-hcCCc--chhHHHHHHHH
Q 046386 416 QSLGESSR-TTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLLA-TSGNA--VALQAGTSLIG 491 (609)
Q Consensus 416 ~al~~~~~-~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~-~~~~~--~~l~~~s~liG 491 (609)
+..+.++. ...++++=.+...+-|+.-| ++.+|++ +|.+. ++.++++.+-.+.++ ...++ ..+.+...++|
T Consensus 42 ~~~~LS~~q~~ll~aiPil~GallRl~~g---~l~drfG-gR~~~-~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G 116 (417)
T COG2223 42 SDFGLSEGQKGLLVAIPILVGALLRLPYG---FLTDRFG-GRKWT-ILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLG 116 (417)
T ss_pred cccCCCHHHHHHHHHHHHHHhHHHHHHHH---hhhcccC-chHHH-HHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHh
Confidence 33445333 45678888888999999988 5566666 45543 333334433333332 12333 36777788888
Q ss_pred hhhcchhhhHHHHHHHhhCCCCchhhhhHHH---hhhhhHHHHHHHHHHHHh
Q 046386 492 LSSGFIFAAAVSITSELFGPNSVGVNHNILI---TNIPIGSLVYGFLAAIVY 540 (609)
Q Consensus 492 ~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~---~a~~~gs~~~~~i~g~iy 540 (609)
++ |+.|++.-+.++.+|=.++.|+--|+-- .+.++..++.|.+...+-
T Consensus 117 ~~-GasFav~m~~~s~~fP~~~qG~AlGI~g~GN~G~av~q~~~P~v~~~~g 167 (417)
T COG2223 117 LA-GASFAVGMPNASFFFPKEKQGLALGIAGAGNLGVAVAQLVAPLVAVAFG 167 (417)
T ss_pred cc-cceehcccccccccCChhhhhHHHHHhccccccHHHHHHHHHHHHHHHh
Confidence 87 7789999999999999999999877763 344555666776655443
No 238
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=76.73 E-value=5.6 Score=45.23 Aligned_cols=181 Identities=19% Similarity=0.197 Sum_probs=110.2
Q ss_pred HHhhhHHHHH-HHHHHHhhccccceeecchhHHHHHhcCCcccchhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHH
Q 046386 383 LLVLRLDFWL-YYIAYFCGGAIGLVYSNNLGQIAQSLGESSRTTTLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWL 460 (609)
Q Consensus 383 ~~l~~~~Fwl-l~~~~~~g~g~Glm~I~n~g~I~~al~~~~~~~~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l 460 (609)
+++.+++--+ ++++.+.|.|.|+. .|.+===.|.+ ....++-++.++-|..|-+..- +|-++.+|++..|...+
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv-~tFLfWHled~---~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~l 441 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLV-FTFLFWHLEDL---GGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYL 441 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHH-HHHHHHHHhhc---CCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeee
Confidence 5666666655 44455666665542 11110001111 2345566678888899998875 67788888876666433
Q ss_pred HHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhh-hhhHHHHHHHHHHHH
Q 046386 461 TIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITN-IPIGSLVYGFLAAIV 539 (609)
Q Consensus 461 ~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a-~~~gs~~~~~i~g~i 539 (609)
-+ +...+=++.+....++......=.+-|+++|.+|+.+-+.+++.==.+-=.+.-|++... -++|-=++.+|.|.+
T Consensus 442 gL--a~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~ 519 (618)
T KOG3762|consen 442 GL--ACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFV 519 (618)
T ss_pred hh--hHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhh
Confidence 22 222233333333556776667778999999999999999999987766666666766222 133333444555566
Q ss_pred hhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Q 046386 540 YDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLLFLR 590 (609)
Q Consensus 540 yD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l~~r 590 (609)
..+-+ -|.+|.+.+..|++.+++-..+.++
T Consensus 520 v~~fg---------------------~~ttf~~~giAcl~~l~~~~~iq~~ 549 (618)
T KOG3762|consen 520 VERFG---------------------ARTTFRIFGIACLVTLALFISIQLL 549 (618)
T ss_pred heeeh---------------------hHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 55543 4678888877777766665555433
No 239
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=74.77 E-value=26 Score=38.74 Aligned_cols=130 Identities=20% Similarity=0.147 Sum_probs=67.4
Q ss_pred hhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCC----cchhHHHHHHHHhhhcchhhhHHHHHHHhhCCC
Q 046386 438 GRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGN----AVALQAGTSLIGLSSGFIFAAAVSITSELFGPN 512 (609)
Q Consensus 438 GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~----~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k 512 (609)
-+.+.| +||.+- -.+.+|..++.+..++..+..+.++..+. .....+...+.-++|-..=-+.=+++.|.=-.+
T Consensus 40 ~Kp~~g~lsD~~p-i~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~ 118 (433)
T PF03092_consen 40 IKPLYGLLSDSFP-IFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALVVELARRE 118 (433)
T ss_pred HhhhHHhhccccc-ccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcC
Confidence 344567 688752 23444555555544443333333322221 232333344444455444445555666653111
Q ss_pred C--chhhhhHHHhhhhhHHHHHHHHHHHHhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHH
Q 046386 513 S--VGVNHNILITNIPIGSLVYGFLAAIVYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAASVLLFL 589 (609)
Q Consensus 513 ~--fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~sl~l~~ 589 (609)
- -|.+-..+...-.+|++++..+.|..+|... ++..|.+.+.+..+.++.++.+..
T Consensus 119 p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~---------------------~~~~f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 119 PESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG---------------------PQGVFLISAALPLLMLIVALFLLE 176 (433)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC---------------------CeEEehHHHHHHHHHHHHHHHhhh
Confidence 1 2223333344555677777778888888764 455566666666666666666554
No 240
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=73.91 E-value=35 Score=37.81 Aligned_cols=94 Identities=19% Similarity=0.215 Sum_probs=55.9
Q ss_pred HHHhCCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhc
Q 046386 66 KSVLGVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYILVFFLCLLSGL 144 (609)
Q Consensus 66 k~~L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l~~~~~l~G~ 144 (609)
++.+|++|+|+=.++.+.++.. ..+++.|.+.+++.+-.++.++.+. .-....+....+. +.-+|. +.++.|.
T Consensus 280 ~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi--~~~~~~~~~~~~~-~~~f~i---~gll~g~ 353 (438)
T COG2270 280 AADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVI--LSIAALYLIFLEG-ELDFWI---LGLLVGT 353 (438)
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHH--HHHHHHHHHHccc-cHHHHH---HHHHHHH
Confidence 5599999999999999999866 5566677777777433333333222 1111122222222 333443 3444555
Q ss_pred chhhhhhHHHHHHHHhcCCCC
Q 046386 145 SITWFNTVCFVLCIQNFPANR 165 (609)
Q Consensus 145 g~~~~~taalvT~~kNFP~~R 165 (609)
+++-.+..+=.--+|+.|+.|
T Consensus 354 s~G~~qA~SRSy~~~lvp~~k 374 (438)
T COG2270 354 SLGGAQASSRSYLARLVPKGK 374 (438)
T ss_pred hcchHHHHHHHHHHHhCCCcc
Confidence 555455555566789999776
No 241
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=72.57 E-value=36 Score=38.28 Aligned_cols=81 Identities=17% Similarity=0.143 Sum_probs=46.6
Q ss_pred hhhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCC----c--chhHHHHHHHHhhhcch-
Q 046386 426 TLLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGN----A--VALQAGTSLIGLSSGFI- 497 (609)
Q Consensus 426 ~~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~----~--~~l~~~s~liG~~yG~~- 497 (609)
+.-.+.-++.++.-.+.| ++|....|+++-||| +++..++.++...+....++ . ...++...+.+++|=..
T Consensus 52 ~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~-lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vn 130 (467)
T COG2211 52 TIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPW-LLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVN 130 (467)
T ss_pred HHHHHHHHHHHHhcchheeeecccccccccccHH-HHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHhee
Confidence 344444455555555678 799988889988885 44444455554444332221 1 22345567777777663
Q ss_pred ---hhhHHHHHHH
Q 046386 498 ---FAAAVSITSE 507 (609)
Q Consensus 498 ---f~~~P~i~se 507 (609)
.++.|.+|.|
T Consensus 131 iPy~al~~~iT~d 143 (467)
T COG2211 131 IPYGALGPEITQD 143 (467)
T ss_pred CchhhcchhhcCC
Confidence 3455555544
No 242
>COG1575 MenA 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism]
Probab=69.78 E-value=67 Score=34.03 Aligned_cols=55 Identities=20% Similarity=0.100 Sum_probs=37.5
Q ss_pred hcchhhhhhHHHHHHHHhcC-CCCcc---hhhhhhhhhhhhHHHHHHHHhhhCCCChhHHHHHHHHHHHHH
Q 046386 143 GLSITWFNTVCFVLCIQNFP-ANRAL---ALSLTVSFNGVSAAIYALAGNAINPSSHALYLLLNALIPLIT 209 (609)
Q Consensus 143 G~g~~~~~taalvT~~kNFP-~~RG~---avgl~k~~~GLSaaI~s~i~~~~f~~d~~~fLllla~~p~~v 209 (609)
+...+++||+ -.|| .+.|. .+++.-|..+..++.|.|- ++-+..+++.++-+.+.
T Consensus 130 ~~~~g~~YTg------Gp~PlgY~gLGEi~~~vffG~l~v~g~~yiqt------~~~~~~~ll~slp~gil 188 (303)
T COG1575 130 CIAAGILYTG------GPFPLGYMGLGEIFVGVFFGPLIVLGAYYIQT------GRLSWAILLPSLPVGIL 188 (303)
T ss_pred HHHheeeecc------CCcCcccCCHHHHHHHHHHHHHHHHHHHHHhc------ccchHHHHHHHHHHHHH
Confidence 3445678886 6899 55665 6888888889999998884 34455566666544433
No 243
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=66.64 E-value=6 Score=44.15 Aligned_cols=105 Identities=16% Similarity=0.157 Sum_probs=67.3
Q ss_pred ccHHHHHHhCCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHH
Q 046386 61 YSSDLKSVLGVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYILVFFLC 139 (609)
Q Consensus 61 YS~~lk~~L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l~~~~ 139 (609)
=-++.++.+|++-++.-+|.+.-+++- ..+=+.|.+.|..-+.-++.+|.++-.+.-.. ++. .-.+|++.++=
T Consensus 55 v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~-----~~f-s~~Fwq~~l~R 128 (493)
T KOG1330|consen 55 VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFA-----SGF-SNHFWQVLLCR 128 (493)
T ss_pred hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHH-----HHH-HHHHHHHHHHH
Confidence 457899999999999888888887764 22333366666553332333332221110000 000 02378877777
Q ss_pred HHhhcchhhhhhHHHHHHHHhcC-CCCcchhhh
Q 046386 140 LLSGLSITWFNTVCFVLCIQNFP-ANRALALSL 171 (609)
Q Consensus 140 ~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl 171 (609)
.+.|.|.+..+..+-.--+-+|| ++|+.+.|+
T Consensus 129 ~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~i 161 (493)
T KOG1330|consen 129 GFVGIGEASYSPIAPSLIADSFPDDKRSRVLGI 161 (493)
T ss_pred HHhccchhhhcccchhHhhhcCcchhhhHHHHH
Confidence 88999988888888788899999 678887764
No 244
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=64.22 E-value=2.4e+02 Score=31.36 Aligned_cols=149 Identities=17% Similarity=0.140 Sum_probs=75.6
Q ss_pred HHHHhhhHH--HHHHHHHHHhhccccceeecchhHHHHHhcCC----cccchhh----HHHHHhhhhhhhhccchhhhhh
Q 046386 381 ARLLVLRLD--FWLYYIAYFCGGAIGLVYSNNLGQIAQSLGES----SRTTTLL----TLYSSFSFFGRLLSAAPDYMRA 450 (609)
Q Consensus 381 ~~~~l~~~~--Fwll~~~~~~g~g~Glm~I~n~g~I~~al~~~----~~~~~~V----Sl~Si~n~~GRl~~g~SD~l~~ 450 (609)
.+++.+++. .|-+|+++.. +|-- .+..-.|.|+.+ +...... ++..+.++++=+..| ++..
T Consensus 240 ~~~~y~~~~ll~WSlWWa~at---cgy~---qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g---~v~~ 310 (412)
T PF01770_consen 240 FKSCYSNPRLLLWSLWWAFAT---CGYY---QVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAG---YVKV 310 (412)
T ss_pred HHHHhcCchHHHHHHHHHHHH---hHHH---HHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHh---Hhhc
Confidence 344555554 5889998854 3332 222333444321 1111211 222233444444445 4433
Q ss_pred hcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHH
Q 046386 451 KVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSL 530 (609)
Q Consensus 451 ~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~ 530 (609)
++..-..+.+....++.+...++....++...-|++.++.+.+|-.+.++.-.-++.---++.||-.+|+= .+-++
T Consensus 311 ~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiN----tf~Al 386 (412)
T PF01770_consen 311 NWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGIN----TFVAL 386 (412)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeH----HHHHH
Confidence 33222222333333333444444444566677788888888888888888777777766666666666554 23343
Q ss_pred HH-HHHHHHHhhc
Q 046386 531 VY-GFLAAIVYDS 542 (609)
Q Consensus 531 ~~-~~i~g~iyD~ 542 (609)
+. ..+.-.+.|+
T Consensus 387 ~LQtilT~iV~d~ 399 (412)
T PF01770_consen 387 VLQTILTLIVVDK 399 (412)
T ss_pred HHHHheEEEEEcC
Confidence 33 3444455564
No 245
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=58.67 E-value=86 Score=35.28 Aligned_cols=119 Identities=16% Similarity=0.172 Sum_probs=63.4
Q ss_pred HHHHhCCChhhhh-HHHHhhhcccchhhhhh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHh
Q 046386 65 LKSVLGVSQVQLN-YLATASDLGKLFGWLSG-LALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYILVFFLCLLS 142 (609)
Q Consensus 65 lk~~L~~sq~qln-~I~~a~~lG~~~G~~sG-ll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l~~~~~l~ 142 (609)
+|.+++.++++.. .++.++-++..--.+.. ++...+.---++.+|..+-++++.+ ..+... .|+++......
T Consensus 268 l~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~--~af~~~----~w~~~~~~v~~ 341 (463)
T KOG2816|consen 268 LKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLL--FAFATE----TWMMFAAGVVV 341 (463)
T ss_pred EeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHH--HHHhcc----chhhhHHHHHH
Confidence 6789999999966 33333333321111111 1111111112445555554444433 222222 36666655444
Q ss_pred hc-chhhhhhHHHHHHHHhcCCCCcchhhhhhhhhhhhHHHHHHHHhhh
Q 046386 143 GL-SITWFNTVCFVLCIQNFPANRALALSLTVSFNGVSAAIYALAGNAI 190 (609)
Q Consensus 143 G~-g~~~~~taalvT~~kNFP~~RG~avgl~k~~~GLSaaI~s~i~~~~ 190 (609)
+. +....-.-+ ....-..|+++|.+.++..+.-||++.+.+.+|..+
T Consensus 342 ~~~~~~~pa~~s-~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 342 ALAGIVFPAIRA-FASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred HhhcchhHHHHh-HHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHH
Confidence 32 222211111 334456789999999999999999888888887655
No 246
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=58.67 E-value=50 Score=35.78 Aligned_cols=87 Identities=18% Similarity=0.240 Sum_probs=59.3
Q ss_pred CCccccccccHHHHHHhCCChhhhhHHHHhhhccc-chhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcch
Q 046386 53 GTNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGK-LFGWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLP 131 (609)
Q Consensus 53 Gt~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~ 131 (609)
-..|.|.+|+ ++|++..|+..+=.++-+-. .+|-+.|.++|...+...+++ ..+-|....+ ....+ .
T Consensus 53 QGpY~Y~LY~-----~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~----~cily~~scl--~k~~~-~ 120 (354)
T PF05631_consen 53 QGPYLYALYE-----SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLL----FCILYSLSCL--TKHSS-N 120 (354)
T ss_pred hcchhHHHHH-----HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHH----HHHHHHHHHH--HHhcc-c
Confidence 3689998883 69999999999888887755 778888999999887665544 3344544433 22222 2
Q ss_pred hHHHHHHHHHhhcchhhhhh
Q 046386 132 YILVFFLCLLSGLSITWFNT 151 (609)
Q Consensus 132 ~~~l~~~~~l~G~g~~~~~t 151 (609)
++.+++-=+++|.+++..++
T Consensus 121 ~~~L~~GRvlgGiaTSLLfS 140 (354)
T PF05631_consen 121 YPVLLLGRVLGGIATSLLFS 140 (354)
T ss_pred cHHHHHHHHHHHHHHHHHHH
Confidence 45555555888888764444
No 247
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=51.68 E-value=6.3 Score=37.47 Aligned_cols=42 Identities=21% Similarity=0.234 Sum_probs=29.5
Q ss_pred hHHHHHHHHhhhcchhhhHHHH-HHHhhCCCCchhhhhHHHhh
Q 046386 483 LQAGTSLIGLSSGFIFAAAVSI-TSELFGPNSVGVNHNILITN 524 (609)
Q Consensus 483 l~~~s~liG~~yG~~f~~~P~i-~se~FG~k~fg~nyg~~~~a 524 (609)
+.++..++|+.||.+=+--=.- .-.++|.++|-.||+.+..+
T Consensus 105 ~~Fg~gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~~a 147 (153)
T PF11947_consen 105 VFFGLGLLGISYGILSASWDPEREGSLLGWEEFKRNWGRMWEA 147 (153)
T ss_pred HHHHHHHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHHHH
Confidence 3445677899999765544332 56678888999999887544
No 248
>PRK00972 tetrahydromethanopterin S-methyltransferase subunit E; Provisional
Probab=49.83 E-value=48 Score=34.05 Aligned_cols=54 Identities=17% Similarity=0.145 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHhhccccceeecchhHHHHHhcCCcccchhhHHHHHhhhhhhhhc
Q 046386 388 LDFWLYYIAYFCGGAIGLVYSNNLGQIAQSLGESSRTTTLLTLYSSFSFFGRLLS 442 (609)
Q Consensus 388 ~~Fwll~~~~~~g~g~Glm~I~n~g~I~~al~~~~~~~~~VSl~Si~n~~GRl~~ 442 (609)
|--|.+|.........-+|..+--.-++.++|- .-++..-..+++....||+.+
T Consensus 62 P~aygl~~ai~g~vA~~lm~~~~~~vlAi~~Ga-~vaa~vhg~ya~taylGR~as 115 (292)
T PRK00972 62 PVAYGLWCAIAGAVAWALMAFGLNPVLAIIVGA-GVAALVHGVYATTAYLGRIAS 115 (292)
T ss_pred CchhHHHHHHHHHHHHHHHHcCccHHHHHHHHH-HHHHHHHHHHHHHHHHhHHHH
Confidence 344556655543333333422222222222332 234556678999999999985
No 249
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=49.78 E-value=2.6e+02 Score=30.44 Aligned_cols=89 Identities=12% Similarity=0.081 Sum_probs=55.5
Q ss_pred hhHHHHHhhhhhhhhcc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHH
Q 046386 427 LLTLYSSFSFFGRLLSA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSIT 505 (609)
Q Consensus 427 ~VSl~Si~n~~GRl~~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~ 505 (609)
+++.+=+..+..=.+.| +...+.||++++|. +++... +-.+.++.-. .++...++++-++-|++.-.+|+.+=+-.
T Consensus 70 qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~-cl~~ci-ly~~scl~k~-~~~~~~L~~GRvlgGiaTSLLfS~FEsW~ 146 (354)
T PF05631_consen 70 QIAILFVAGFASSAIFGTFVGSLADRYGRKKA-CLLFCI-LYSLSCLTKH-SSNYPVLLLGRVLGGIATSLLFSAFESWM 146 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH-HHHHHH-HHHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34454455555555444 45566666664333 555443 2333333333 56678899999999999999999998866
Q ss_pred HHhhCCCCchhhh
Q 046386 506 SELFGPNSVGVNH 518 (609)
Q Consensus 506 se~FG~k~fg~ny 518 (609)
-.-...+.|...|
T Consensus 147 V~Eh~~~g~~~~~ 159 (354)
T PF05631_consen 147 VHEHNKRGFPQEW 159 (354)
T ss_pred HHHHHHcCCChHH
Confidence 5555666666555
No 250
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=48.08 E-value=1.1e+02 Score=33.79 Aligned_cols=60 Identities=13% Similarity=0.118 Sum_probs=41.2
Q ss_pred HHHHHHHHHhhcchhhhhhHHHHHHHHhcCCCCcchhhhhh---hhhhhhHHHHHHHHhhhCCC
Q 046386 133 ILVFFLCLLSGLSITWFNTVCFVLCIQNFPANRALALSLTV---SFNGVSAAIYALAGNAINPS 193 (609)
Q Consensus 133 ~~l~~~~~l~G~g~~~~~taalvT~~kNFP~~RG~avgl~k---~~~GLSaaI~s~i~~~~f~~ 193 (609)
|.+...=.+-|.-....-.++.+-..++||++ =.++.-.. -.-|++..++|.+.-..++.
T Consensus 313 ~~i~~~klLH~~e~~l~lva~fkYI~~~fd~r-lsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~ 375 (412)
T PF01306_consen 313 WVISLIKLLHALEFPLLLVAAFKYITAHFDKR-LSATLYLVGFQFAKQIGIIILSPLAGYLYDR 375 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GG-GHHHHHHHHHTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHh-HHHHHHHHHHHHHHHHHHHHHhhhHHhhHhh
Confidence 44544546667666778889999999999954 33333333 35679999999998777653
No 251
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=47.75 E-value=4.6e+02 Score=29.61 Aligned_cols=90 Identities=13% Similarity=0.079 Sum_probs=49.8
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcch
Q 046386 90 GWLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALA 168 (609)
Q Consensus 90 G~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~a 168 (609)
+++++-+.++.+|-..+.+|+.. ..-|-..++... -+...+...+.|.|.+..+++-=.--.+|.+ +++..-
T Consensus 67 ~l~~psiv~~i~~K~~lv~ga~~-y~~f~~gfl~~N------~y~~yfssallG~Gaallw~GqG~ylt~~st~~tie~N 139 (461)
T KOG3098|consen 67 CLFAPSIVNFLGPKWALVIGATC-YAAFPLGFLFPN------SYYLYFSSALLGFGAALLWTGQGGYLTSNSTRETIERN 139 (461)
T ss_pred HHhhHHHHHHhhHHHHHHHHhHH-HHHHHHHHHhcc------hHHHHHHHHHhhhhHHheecccceehhhcCChhhHHHH
Confidence 46667777776443333443322 223322222221 2344445577788777655554455677887 456888
Q ss_pred hhhhhhhhhhhHHHHHHH
Q 046386 169 LSLTVSFNGVSAAIYALA 186 (609)
Q Consensus 169 vgl~k~~~GLSaaI~s~i 186 (609)
+++.-+.+=.|-.+.+-+
T Consensus 140 isi~Wai~~~~li~Ggi~ 157 (461)
T KOG3098|consen 140 ISIFWAIGQSSLIIGGII 157 (461)
T ss_pred HHHHHHHHHHHHHhhhHh
Confidence 888777766665554444
No 252
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=39.27 E-value=3.3e+02 Score=31.00 Aligned_cols=92 Identities=14% Similarity=-0.005 Sum_probs=54.2
Q ss_pred HHHhCCChhhhhHHHHhhhccc-chhhhhhhhhhhh-hHHHHHHHHHHHHHHHHHHHHHHH-hhcCcchhHHHHHHHHHh
Q 046386 66 KSVLGVSQVQLNYLATASDLGK-LFGWLSGLALMYF-PLWVVLFMAAFMGFFGYGLQWLVI-SHVISLPYILVFFLCLLS 142 (609)
Q Consensus 66 k~~L~~sq~qln~I~~a~~lG~-~~G~~sGll~~~~-P~~~vllig~~~~~~GY~~~~l~~-~~~~~~~~~~l~~~~~l~ 142 (609)
++-||+||++-..+-.+-..=. ...++.|.++|.. ...-.+..|+++-.+|+.++-..- .+. -.+...+.++
T Consensus 53 ~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~-----~gl~i~L~~I 127 (498)
T COG3104 53 GDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGP-----GGLYIGLALI 127 (498)
T ss_pred cccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccc-----cHHHHHHHHH
Confidence 3338899999655433322211 2345558888885 555667888888889997763331 121 1233344445
Q ss_pred hcchhhhhhHHHHHHHHhcC
Q 046386 143 GLSITWFNTVCFVLCIQNFP 162 (609)
Q Consensus 143 G~g~~~~~taalvT~~kNFP 162 (609)
++|++.+-..+-.-..+-||
T Consensus 128 ~iG~Gl~K~NiS~llg~ly~ 147 (498)
T COG3104 128 IVGTGLFKPNISSLLGELYP 147 (498)
T ss_pred HhccccccccHHHHHHHhcC
Confidence 56667665554455577888
No 253
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=38.37 E-value=2.1e+02 Score=27.15 Aligned_cols=61 Identities=10% Similarity=-0.139 Sum_probs=39.3
Q ss_pred hHHHHHHHHHhhcchhhhhhHHHHHHHHhcC-CCCcchhhhhhhhhhhhHHHHHHHHhhhCC
Q 046386 132 YILVFFLCLLSGLSITWFNTVCFVLCIQNFP-ANRALALSLTVSFNGVSAAIYALAGNAINP 192 (609)
Q Consensus 132 ~~~l~~~~~l~G~g~~~~~taalvT~~kNFP-~~RG~avgl~k~~~GLSaaI~s~i~~~~f~ 192 (609)
.|.+.....+.|.|.+.+.++--..-.++-. ++|+.-.|+-.+.+-.|..+...+....++
T Consensus 89 ~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 89 SYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred HHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3556666678888887666665444445554 567888888888888766665555433333
No 254
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=36.49 E-value=1.7e+02 Score=32.04 Aligned_cols=112 Identities=14% Similarity=0.140 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHH
Q 046386 459 WLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAI 538 (609)
Q Consensus 459 ~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~ 538 (609)
.+.+..+..+...++.....+....|++..+....|+..-++.-.-+++---.+.||-.+|+=.. ++-.+=..+.-.
T Consensus 305 ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTF---vAl~lQsilT~i 381 (433)
T KOG3810|consen 305 LLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTF---VALILQSILTLI 381 (433)
T ss_pred HHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHH---HHHHHHHhheEE
Confidence 33333333333333444566667788889999999999999988888877777777777776522 222223455556
Q ss_pred HhhccCCCCCCcCcccCCCcccccccccHHHHHHHHHHHHHHHHH
Q 046386 539 VYDSNVSSGIGIGNVVSDSVVCMGRHCYFLTFVLWGCVSVVGLAA 583 (609)
Q Consensus 539 iyD~~~~~~~~~~~~~~~~~~C~G~~Cy~~tF~i~a~~~~~~~~~ 583 (609)
+-|+.+-+.+-. ..-. -|..=|++.++..+++..+
T Consensus 382 Vvd~~g~~L~ir-------~Q~~---~Y~~Yf~v~~~i~~~~~~~ 416 (433)
T KOG3810|consen 382 VVDDRGLGLDIR-------TQFV---VYSSYFIVLGVIFLIGFGI 416 (433)
T ss_pred EEcccccCCCcc-------eeEE---EEeehHHHHHHHHHHHHHH
Confidence 667655332110 0001 2333367777776666655
No 255
>PF00976 ACTH_domain: Corticotropin ACTH domain; InterPro: IPR013531 Pro-opiomelanocortin is present in high levels in the pituitary and is processed into 3 major peptide families: adrenocorticotrophin (ACTH); alpha-, beta- and gamma-melanocyte- stimulating hormones (MSH); and beta-endorphin []. ACTH regulates the synthesis and release of glucocorticoids and, to some extent, aldosterone in the adrenal cortex. It is synthesised and released in response to corticotrophin-releasing factor at times of stress (i.e. heat, cold, infection, etc.), its release leading to increased metabolism. The action of MSH in man is poorly understood, but it may be involved in temperature regulation []. Full activity of ACTH resides in the first 20 N-terminal amino acids, the first 13 of which are identical to alpha-MSH [, ]. The function of this region is not known, though it is found near the centre of these proteins.
Probab=35.01 E-value=16 Score=26.18 Aligned_cols=14 Identities=43% Similarity=0.821 Sum_probs=10.7
Q ss_pred CCccCCCCCCcccc
Q 046386 11 EPEKKRRPVNIYRT 24 (609)
Q Consensus 11 ~~~~~~~~~~~~~~ 24 (609)
..-||||||.+|-.
T Consensus 12 p~g~KRRPvKVypn 25 (39)
T PF00976_consen 12 PVGRKRRPVKVYPN 25 (39)
T ss_pred CCCcccCcceeCCC
Confidence 35689999998843
No 256
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=33.25 E-value=2e+02 Score=32.44 Aligned_cols=89 Identities=17% Similarity=0.229 Sum_probs=58.8
Q ss_pred hhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCc---chhH-----HHHHHHHhhhcchhhhHHHHHHHhhCCCCchhh
Q 046386 446 DYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNA---VALQ-----AGTSLIGLSSGFIFAAAVSITSELFGPNSVGVN 517 (609)
Q Consensus 446 D~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~---~~l~-----~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~n 517 (609)
=|+.+|++.+ +. +.+...+.+++..+=.....+ ..++ .+..+.+.++=....+=+=+-+.+|+.++-++-
T Consensus 100 mw~ldk~GLR-~a-~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A 177 (480)
T KOG2563|consen 100 MWILDKFGLR-TA-LLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIA 177 (480)
T ss_pred HHhhcccchH-HH-HHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhh
Confidence 3778887743 32 223334556665553312222 5555 778889999998888888888999999988876
Q ss_pred hhHHHhhhhhHHHHHHHHH
Q 046386 518 HNILITNIPIGSLVYGFLA 536 (609)
Q Consensus 518 yg~~~~a~~~gs~~~~~i~ 536 (609)
=-+-.++.++|..++.++.
T Consensus 178 ~~~~v~~n~LGvavg~llp 196 (480)
T KOG2563|consen 178 TVLGVMGNPLGVAVGFLLP 196 (480)
T ss_pred hhHHHhcchHHHHHHhhcc
Confidence 6565667777766655443
No 257
>TIGR01113 mtrE N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit E. coenzyme M methyltransferase subunit E in methanogenic archaea. This methyltranfersae is membrane-associated enzyme complex that uses methyl-transfer reaction to drive sodium-ion pump. Archaea have evolved energy-yielding pathways marked by one-carbon biochemistry featuring novel cofactors and enzymes. This transferase is involved in the transfer of 'methyl' group from N5-methyltetrahydromethanopterin to coenzyme M. In an accompanying reaction, methane is produced by two-electron reduction of methyl-coenzyme M by another enzyme methyl-coenzyme M reductase.
Probab=33.16 E-value=1.5e+02 Score=30.43 Aligned_cols=19 Identities=21% Similarity=0.506 Sum_probs=15.2
Q ss_pred cchhhHHHHHhhhhhhhhc
Q 046386 424 TTTLLTLYSSFSFFGRLLS 442 (609)
Q Consensus 424 ~~~~VSl~Si~n~~GRl~~ 442 (609)
++..-..+++....||+.+
T Consensus 91 aa~v~~~ya~tay~GR~as 109 (283)
T TIGR01113 91 AALVHLAYATTAYLGRIAS 109 (283)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 4455678999999999985
No 258
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=31.17 E-value=1.7e+02 Score=32.44 Aligned_cols=127 Identities=17% Similarity=0.205 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHhcCCccccccccHHHHHHhCCChhhh---hHHHHhhhc-ccchhhhhhhhhhhhhHHHHHHHHHHHHHH
Q 046386 40 MILVATIWIQAFTGTNFDFSAYSSDLKSVLGVSQVQL---NYLATASDL-GKLFGWLSGLALMYFPLWVVLFMAAFMGFF 115 (609)
Q Consensus 40 ~~lvas~~v~l~~Gt~Y~fs~YS~~lk~~L~~sq~ql---n~I~~a~~l-G~~~G~~sGll~~~~P~~~vllig~~~~~~ 115 (609)
..+.-++|=+++...-|...-|-+.|=+...=++.+. ..+-.+.++ |....+..|.+-....+|.-+.++.+-...
T Consensus 248 ~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~ 327 (412)
T PF01770_consen 248 RLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQ 327 (412)
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHH
Confidence 4555667777666666666677777766662222211 112222222 222333334443333555544444333333
Q ss_pred HHHHHHHHHhhcCcchhHHHHHHHHHhhcchhhhhhHHHHHHHHhcCCCC-cchhh
Q 046386 116 GYGLQWLVISHVISLPYILVFFLCLLSGLSITWFNTVCFVLCIQNFPANR-ALALS 170 (609)
Q Consensus 116 GY~~~~l~~~~~~~~~~~~l~~~~~l~G~g~~~~~taalvT~~kNFP~~R-G~avg 170 (609)
|-.+......+. .|..+....+-+..-.+..|.|-.-.++|--++| |.+-|
T Consensus 328 a~~L~lm~~t~~----Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFG 379 (412)
T PF01770_consen 328 AGLLFLMSFTGN----IWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFG 379 (412)
T ss_pred HHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeee
Confidence 333333445444 3444433344455456777888888899988665 66554
No 259
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=29.81 E-value=18 Score=41.51 Aligned_cols=75 Identities=19% Similarity=0.213 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhcCCccccccccHHHHHHhCCChhhhhHHHHhhhcccchh-hhhhhhhhhh--hHHHHHHHHHHHHHHHH
Q 046386 41 ILVATIWIQAFTGTNFDFSAYSSDLKSVLGVSQVQLNYLATASDLGKLFG-WLSGLALMYF--PLWVVLFMAAFMGFFGY 117 (609)
Q Consensus 41 ~lvas~~v~l~~Gt~Y~fs~YS~~lk~~L~~sq~qln~I~~a~~lG~~~G-~~sGll~~~~--P~~~vllig~~~~~~GY 117 (609)
.+....++| .....|.-+.-+ .+++|++++.+|.-.|..+.|+|..+. ++...+.+.. |+|+ .+|+++..+|.
T Consensus 7 ~~~~~~~~q-~~~~g~~~~~lt-tiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwi--g~g~~~~~~g~ 82 (539)
T PF03137_consen 7 FLCLLGLFQ-MMVSGYVNSSLT-TIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWI--GIGALLMGLGS 82 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHH-HHHHHHHHHHHH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccee--eecHHHHHHHH
Confidence 344445556 555567555554 999999999999999999999997332 2223333333 5554 44555544554
Q ss_pred HH
Q 046386 118 GL 119 (609)
Q Consensus 118 ~~ 119 (609)
.+
T Consensus 83 ~l 84 (539)
T PF03137_consen 83 LL 84 (539)
T ss_dssp --
T ss_pred HH
Confidence 33
No 260
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=28.74 E-value=4.2e+02 Score=25.24 Aligned_cols=112 Identities=26% Similarity=0.247 Sum_probs=60.0
Q ss_pred cccHHHHHHhCCCh--hhhhHHHHhhhcccchh-hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHH
Q 046386 60 AYSSDLKSVLGVSQ--VQLNYLATASDLGKLFG-WLSGLALMYFPLWVVLFMAAFMGFFGYGLQWLVISHVISLPYILVF 136 (609)
Q Consensus 60 ~YS~~lk~~L~~sq--~qln~I~~a~~lG~~~G-~~sGll~~~~P~~~vllig~~~~~~GY~~~~l~~~~~~~~~~~~l~ 136 (609)
...+.+...++.+. .+...+.....++..++ ++.|.+.|...+.....++......+. ........ ...+.+.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~ 98 (338)
T COG0477 23 PALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGT-LLLALAPN---VGLALLL 98 (338)
T ss_pred HHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHH-HHHHhCcc---chHHHHH
Confidence 34455555555555 35666666666666555 577888887533223333322212221 11111111 1234443
Q ss_pred HHHHHhhcchhhhhhHHHHHHHHhcCC--CCcchhhhhhhh
Q 046386 137 FLCLLSGLSITWFNTVCFVLCIQNFPA--NRALALSLTVSF 175 (609)
Q Consensus 137 ~~~~l~G~g~~~~~taalvT~~kNFP~--~RG~avgl~k~~ 175 (609)
...+..|.+.+...........+.+|+ +|+...++....
T Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (338)
T COG0477 99 ILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLG 139 (338)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 444446666666666666777888996 777777766664
No 261
>PF10283 zf-CCHH: Zinc-finger (CX5CX6HX5H) motif; InterPro: IPR019406 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. C2H2-type (classical) zinc fingers (Znf) were the first class to be characterised. They contain a short beta hairpin and an alpha helix (beta/beta/alpha structure), where a single zinc atom is held in place by Cys(2)His(2) (C2H2) residues in a tetrahedral array. C2H2 Znf's can be divided into three groups based on the number and pattern of fingers: triple-C2H2 (binds single ligand), multiple-adjacent-C2H2 (binds multiple ligands), and separated paired-C2H2 []. C2H2 Znf's are the most common DNA-binding motifs found in eukaryotic transcription factors, and have also been identified in prokaryotes []. Transcription factors usually contain several Znf's (each with a conserved beta/beta/alpha structure) capable of making multiple contacts along the DNA, where the C2H2 Znf motifs recognise DNA sequences by binding to the major groove of DNA via a short alpha-helix in the Znf, the Znf spanning 3-4 bases of the DNA []. C2H2 Znf's can also bind to RNA and protein targets []. This entry represents a C2H2-type Znf motif that in humans is part of the APLF (aprataxin- and PNK-like) forkead association domain-containing protein []. The Znf is highly conserved both in primary sequence and in the spacing between the putative zinc coordinating residues, and is configured CX5CX6HX5H. Many of the proteins containing this Znf are involved in DNA strand break repair and/or contain domains implicated in DNA metabolism. This Znf motif appears to be specialised for the non-covalent binding of poly ADP-ribose; Aprataxin also appears to covalently bind poly ADP-ribose, but not through its Znf motif [].; PDB: 2KQC_A 2KUO_A 2KQE_A 2KQD_A 2KQB_A.
Probab=27.55 E-value=23 Score=23.52 Aligned_cols=10 Identities=40% Similarity=1.002 Sum_probs=5.0
Q ss_pred cc-ccccccHH
Q 046386 559 VC-MGRHCYFL 568 (609)
Q Consensus 559 ~C-~G~~Cy~~ 568 (609)
.| +|..|||.
T Consensus 2 ~C~YG~~CYRk 12 (26)
T PF10283_consen 2 PCKYGAKCYRK 12 (26)
T ss_dssp E-TTGGG-S--
T ss_pred CCCcchhhhcC
Confidence 48 79999984
No 262
>PF04206 MtrE: Tetrahydromethanopterin S-methyltransferase, subunit E ; InterPro: IPR005780 This model describes N5-methyltetrahydromethanopterin: coenzyme M methyltransferase subunit E in methanogenic archaea. This methyltranferase is a membrane-associated enzyme complex that uses methyl-transfer reaction to drive sodium-ion pump. 5-methyl-5,6,7,8-tetrahydromethanopterin + 2-mercaptoethanesulphonate = 5,6,7,8-tetrahydromethanopterin + 2-(methylthio)ethanesulphonate. Archaea have evolved energy-yielding pathways marked by one-carbon biochemistry featuring novel cofactors and enzymes. This transferase (encoded by subunit A) is involved in the transfer of 'methyl' group from N5-methyltetrahydromethanopterin to coenzyme M. In an accompanying reaction, methane is produced by two-electron reduction of methyl-coenzyme M by another enzyme, methyl-coenzyme M reductase.; GO: 0030269 tetrahydromethanopterin S-methyltransferase activity, 0006814 sodium ion transport, 0005737 cytoplasm, 0012506 vesicle membrane
Probab=27.51 E-value=1.6e+02 Score=30.16 Aligned_cols=19 Identities=21% Similarity=0.562 Sum_probs=15.7
Q ss_pred cchhhHHHHHhhhhhhhhc
Q 046386 424 TTTLLTLYSSFSFFGRLLS 442 (609)
Q Consensus 424 ~~~~VSl~Si~n~~GRl~~ 442 (609)
++..-..++...++||+.+
T Consensus 91 Aa~v~g~ya~taylGR~~s 109 (269)
T PF04206_consen 91 AALVHGVYATTAYLGRIAS 109 (269)
T ss_pred HHHHHHHHHHHHHhhhHhh
Confidence 4556688999999999985
No 263
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=25.79 E-value=6.6e+02 Score=28.09 Aligned_cols=103 Identities=21% Similarity=0.191 Sum_probs=62.2
Q ss_pred chhhHHHHHhhhhhhhh----cc-chhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhh
Q 046386 425 TTLLTLYSSFSFFGRLL----SA-APDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFA 499 (609)
Q Consensus 425 ~~~VSl~Si~n~~GRl~----~g-~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~ 499 (609)
..+-+++...-+.|-++ +| .+|.+.+|.+ ..++....++...+-...++-..+++--+++|++.|+ .+
T Consensus 112 ~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~------f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~p 184 (528)
T KOG0253|consen 112 EGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKG------FNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LP 184 (528)
T ss_pred hhhhhHHHHHHHhhhhhhhhhhheehhhhhcchh------hhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-cc
Confidence 34556666666666555 36 4777655443 3333434444444443456667788889999999999 55
Q ss_pred hHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHHHH
Q 046386 500 AAVSITSELFGPNSVGVNHNILITNIPIGSLVYGFL 535 (609)
Q Consensus 500 ~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i 535 (609)
+--++-.| |+..--+..+-++..-|++|..+-..+
T Consensus 185 v~~~~yle-~lp~~~r~~~~V~~~~waig~v~ea~l 219 (528)
T KOG0253|consen 185 VDSAIYLE-FLPSSHRWLLTVMSFFWAIGQVFEALL 219 (528)
T ss_pred HhHHHHHH-hccCcCCCcchhHHHHHHHHHHHHHHH
Confidence 55444443 555555666667765566776665443
No 264
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=25.47 E-value=1e+03 Score=26.84 Aligned_cols=118 Identities=19% Similarity=0.244 Sum_probs=74.4
Q ss_pred cchhhHHHHHhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHhhhcchhhhHHH
Q 046386 424 TTTLLTLYSSFSFFGRLLSAAPDYMRAKVYFARTGWLTIALLPTPVAFCLLATSGNAVALQAGTSLIGLSSGFIFAAAVS 503 (609)
Q Consensus 424 ~~~~VSl~Si~n~~GRl~~g~SD~l~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~~l~~~s~liG~~yG~~f~~~P~ 503 (609)
.+.+.++.++.+..+-++.. -.+.+..+..+ .+.+.+....+..+.++....+...|.. ..+..--+..+..+=+
T Consensus 279 ~s~~~~~~~~~~~i~~l~~~--~~l~~~l~~~~--~i~lGl~~~~~~~~~~af~~~~w~~~~~-~v~~~~~~~~~pa~~s 353 (463)
T KOG2816|consen 279 FSDLLSLVSILGIISQLLLL--PLLSSILGEKR--LISLGLLSEFLQLLLFAFATETWMMFAA-GVVVALAGIVFPAIRA 353 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHHHHhhhh--HhhHHHHHHHHHHHHHHHhccchhhhHH-HHHHHhhcchhHHHHh
Confidence 34466666666666665543 13344444333 2333333334455555533334444444 4444455667777778
Q ss_pred HHHHhhCCCCchhhhhHHHhhhhhHHHHHHHHHHHHhhccCCC
Q 046386 504 ITSELFGPNSVGVNHNILITNIPIGSLVYGFLAAIVYDSNVSS 546 (609)
Q Consensus 504 i~se~FG~k~fg~nyg~~~~a~~~gs~~~~~i~g~iyD~~~~~ 546 (609)
+++-+=+.+..|++++++...-++.+.+.+.+++.+|-...+.
T Consensus 354 ~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t~~~ 396 (463)
T KOG2816|consen 354 FASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALTLDD 396 (463)
T ss_pred HHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHHHHh
Confidence 8888889999999999999988888899998988888766543
No 265
>PF08566 Pam17: Mitochondrial import protein Pam17; InterPro: IPR013875 The presequence translocase-associated motor (PAM) drives the completion of preprotein translocation into the mitochondrial matrix. The Pam17 subunit is required for formation of a stable complex between cochaperones Pam16 and Pam18 and promotes the association of Pam16-Pam18 with the presequence translocase []. Mitochondria lacking Pam17 are selectively impaired in the import of matrix proteins [].
Probab=21.35 E-value=66 Score=31.23 Aligned_cols=18 Identities=28% Similarity=0.303 Sum_probs=12.9
Q ss_pred CCchHHHHHHHHHHHHhc
Q 046386 35 QSRKWMILVATIWIQAFT 52 (609)
Q Consensus 35 ~~~Rw~~lvas~~v~l~~ 52 (609)
..+|+.-+++++..++.+
T Consensus 35 k~rrr~~~~~si~t~~~g 52 (173)
T PF08566_consen 35 KSRRRINLVSSIPTGLLG 52 (173)
T ss_pred HHhhHHHHHhHHHHHHHH
Confidence 446788888888876654
No 266
>PF03222 Trp_Tyr_perm: Tryptophan/tyrosine permease family; InterPro: IPR018227 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell. A number of such proteins have been found to be evolutionary related [, , ]. Aromatic amino acids are concentrated in the cytoplasm of Escherichia coli by 4 distinct transport systems: a general aromatic amino acid permease, and a specific permease for each of the 3 types (Phe, Tyr and Trp) []. It has been shown [] that some permeases in E. coli and related bacteria are evolutionary related. These permeases are proteins of about 400 to 420 amino acids and are located in the cytoplasmic membrane and, like bacterial sugar/cation transporters, are thought to contain 12 transmembrane (TM) regions [] - hydropathy analysis, however, is inconclusive, suggesting the possibility of 10 to 12 membrane-spanning domains []. The best conserved domain is a stretch of 20 residues which seems to be located in a cytoplasmic loop between the first and second transmembrane region.
Probab=20.96 E-value=2.8e+02 Score=30.39 Aligned_cols=29 Identities=3% Similarity=0.036 Sum_probs=20.8
Q ss_pred CcchhHHHHHHHHhhhcchhhhHHHHHHH
Q 046386 479 NAVALQAGTSLIGLSSGFIFAAAVSITSE 507 (609)
Q Consensus 479 ~~~~l~~~s~liG~~yG~~f~~~P~i~se 507 (609)
.|..+..+--..|.....++.++|++..-
T Consensus 332 ~p~~F~~al~~aG~~~~il~~ilP~~m~~ 360 (394)
T PF03222_consen 332 FPNGFLIALGYAGIGIAILLGILPALMVW 360 (394)
T ss_pred CcHHHHHHHHhhcHHHHHHHHHHHHHHHH
Confidence 35667777777787778888888876553
No 267
>COG4603 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=20.30 E-value=7.4e+02 Score=26.99 Aligned_cols=105 Identities=13% Similarity=0.101 Sum_probs=57.8
Q ss_pred HHHHHHHHhhhcchhhhHHHHHHHhhCCCCchhhhhHHHhhhhhHHHHHH-HHHHHHhhccCC--CCCCcCcccCCCccc
Q 046386 484 QAGTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYG-FLAAIVYDSNVS--SGIGIGNVVSDSVVC 560 (609)
Q Consensus 484 ~~~s~liG~~yG~~f~~~P~i~se~FG~k~fg~nyg~~~~a~~~gs~~~~-~i~g~iyD~~~~--~~~~~~~~~~~~~~C 560 (609)
.....+.|..-|+.|+..|.+....||...-= ..+++.+ ++-++.. ++-|..+|.+.. .|+.... +..=
T Consensus 115 ~p~a~l~g~~~G~~wa~ipg~Lka~f~~nEVI---ttiMlNy-Ia~~l~~~lV~~~~~~p~~~~~~~T~~i~----~~a~ 186 (356)
T COG4603 115 LPLALLAGAAGGGLWALIPGLLKARFGVNEVI---TTIMLNY-IAVYLLNYLVEGPLRDPAGTNFPQTRPIP----DAAR 186 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHH---HHHHHHH-HHHHHHHHHHcCcccCCCcCCCccCccCc----hhhc
Confidence 44577889999999999999999999965431 1122322 2223332 344556666552 1211100 0000
Q ss_pred ccccccHH-HHHHHHHHHHHHHHHHHHHHHHHhhhHH
Q 046386 561 MGRHCYFL-TFVLWGCVSVVGLAASVLLFLRTRHAYD 596 (609)
Q Consensus 561 ~G~~Cy~~-tF~i~a~~~~~~~~~sl~l~~r~r~~y~ 596 (609)
..+.-.+. .+.....+.+++.++.+++.+||+.=|+
T Consensus 187 lp~~~~~~~~~~~g~lial~~av~~~~ll~kT~~G~~ 223 (356)
T COG4603 187 LPSLFLASGRLHWGFLLALAAAVLVWFLLKKTVFGYE 223 (356)
T ss_pred CCccccccchHHHHHHHHHHHHHHHHHHHHHccCCeE
Confidence 11111111 3444555566777788888899886554
Done!