Query 046389
Match_columns 558
No_of_seqs 434 out of 3388
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 20:25:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046389.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046389hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 2.4E-53 8.2E-58 438.0 27.6 363 3-386 9-386 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 5.2E-49 1.8E-53 405.7 25.4 321 3-344 42-363 (437)
3 4g8k_A 2-5A-dependent ribonucl 100.0 5.1E-45 1.8E-49 362.4 23.1 287 5-344 22-320 (337)
4 3utm_A Tankyrase-1; tankyrase, 100.0 3E-45 1E-49 366.0 20.9 307 4-394 20-330 (351)
5 1wdy_A 2-5A-dependent ribonucl 100.0 2.2E-43 7.6E-48 341.6 27.1 270 5-322 2-283 (285)
6 1wdy_A 2-5A-dependent ribonucl 100.0 7.7E-42 2.6E-46 330.8 20.8 264 41-375 3-284 (285)
7 3d9h_A CDNA FLJ77766, highly s 100.0 5.2E-41 1.8E-45 324.8 21.5 179 6-189 13-201 (285)
8 2xai_A ASB-9, ankyrin repeat a 100.0 1.2E-40 4E-45 318.3 21.2 247 7-339 2-252 (261)
9 3utm_A Tankyrase-1; tankyrase, 100.0 9.4E-40 3.2E-44 326.2 25.3 269 3-333 53-321 (351)
10 4g8k_A 2-5A-dependent ribonucl 100.0 4.2E-40 1.4E-44 327.0 21.4 271 40-386 22-310 (337)
11 1oy3_D Transcription factor in 100.0 2.2E-40 7.6E-45 320.2 18.8 248 40-337 6-270 (282)
12 2fo1_E LIN-12 protein; beta-ba 100.0 8.3E-41 2.8E-45 336.2 16.2 260 4-344 90-365 (373)
13 2fo1_E LIN-12 protein; beta-ba 100.0 2.7E-41 9.2E-46 339.8 11.7 250 40-365 91-366 (373)
14 3d9h_A CDNA FLJ77766, highly s 100.0 6.1E-40 2.1E-44 317.3 19.4 243 40-335 12-265 (285)
15 3ljn_A Hypothetical protein; a 100.0 1.3E-40 4.4E-45 334.4 14.9 255 40-339 17-303 (364)
16 1yyh_A HN1;, notch 1, ankyrin 100.0 7.3E-40 2.5E-44 311.3 14.5 227 34-344 2-242 (253)
17 1yyh_A HN1;, notch 1, ankyrin 100.0 6.6E-39 2.3E-43 304.7 19.7 231 2-312 4-247 (253)
18 1k1a_A B-cell lymphoma 3-encod 100.0 8.2E-39 2.8E-43 301.7 18.4 227 40-344 6-235 (241)
19 3ljn_A Hypothetical protein; a 100.0 2.8E-39 9.6E-44 324.6 15.2 263 2-313 14-314 (364)
20 3b7b_A Euchromatic histone-lys 100.0 3.4E-38 1.2E-42 296.8 20.9 216 40-338 8-223 (237)
21 2xai_A ASB-9, ankyrin repeat a 100.0 1.4E-38 4.9E-43 303.8 18.3 181 2-189 30-210 (261)
22 1k1a_A B-cell lymphoma 3-encod 100.0 1.6E-38 5.5E-43 299.7 17.7 230 2-312 3-240 (241)
23 3aji_A 26S proteasome non-ATPa 100.0 4.3E-38 1.5E-42 294.8 20.3 228 5-313 3-230 (231)
24 1s70_B 130 kDa myosin-binding 100.0 1.5E-38 5.2E-43 310.2 15.6 263 14-334 4-274 (299)
25 2dzn_A Probable 26S proteasome 100.0 2.5E-37 8.7E-42 288.9 21.6 80 252-336 138-219 (228)
26 4b93_B Ankyrin repeat domain-c 100.0 2E-38 6.7E-43 303.2 13.4 219 1-337 4-230 (269)
27 3aji_A 26S proteasome non-ATPa 100.0 7E-38 2.4E-42 293.4 16.1 222 40-344 3-224 (231)
28 1oy3_D Transcription factor in 100.0 5.7E-38 1.9E-42 303.3 15.8 252 70-388 2-269 (282)
29 3b7b_A Euchromatic histone-lys 100.0 4.5E-37 1.5E-41 289.1 21.2 227 2-309 5-231 (237)
30 4b93_B Ankyrin repeat domain-c 100.0 1.9E-37 6.4E-42 296.4 15.6 205 40-379 8-220 (269)
31 3eu9_A Huntingtin-interacting 100.0 9.9E-36 3.4E-40 280.2 22.0 230 40-314 6-236 (240)
32 3kea_A K1L; tropism, ANK repea 100.0 4.1E-36 1.4E-40 290.3 17.9 237 16-314 7-247 (285)
33 2dzn_A Probable 26S proteasome 100.0 2.5E-35 8.4E-40 275.4 21.6 218 8-309 2-226 (228)
34 2f8y_A Notch homolog 1, transl 100.0 1.7E-35 5.8E-40 275.5 18.1 216 19-314 2-217 (223)
35 1s70_B 130 kDa myosin-binding 100.0 7.8E-36 2.7E-40 291.0 16.3 249 4-310 36-286 (299)
36 1sw6_A Regulatory protein SWI6 100.0 4.5E-37 1.5E-41 303.1 4.6 259 18-336 29-327 (327)
37 3kea_A K1L; tropism, ANK repea 100.0 6E-35 2E-39 282.2 17.9 228 53-344 9-240 (285)
38 1ikn_D Protein (I-kappa-B-alph 100.0 2.6E-35 8.8E-40 276.9 10.8 222 40-336 5-230 (236)
39 2f8y_A Notch homolog 1, transl 100.0 6.3E-35 2.1E-39 271.7 13.1 208 54-344 2-210 (223)
40 3eu9_A Huntingtin-interacting 100.0 2.1E-33 7.1E-38 264.3 20.6 229 3-280 4-236 (240)
41 2rfa_A Transient receptor pote 100.0 2.4E-33 8.1E-38 262.7 19.6 207 42-313 2-222 (232)
42 1ikn_D Protein (I-kappa-B-alph 100.0 1.2E-34 4.2E-39 272.3 10.4 219 71-386 2-228 (236)
43 3hra_A Ankyrin repeat family p 100.0 1.2E-32 4.2E-37 251.8 21.7 198 7-311 4-201 (201)
44 2rfa_A Transient receptor pote 100.0 5.8E-33 2E-37 260.1 19.8 205 7-280 2-223 (232)
45 1sw6_A Regulatory protein SWI6 100.0 4.1E-35 1.4E-39 289.1 2.7 262 42-386 22-325 (327)
46 3hra_A Ankyrin repeat family p 100.0 6.6E-32 2.2E-36 246.9 20.1 130 2-135 33-168 (201)
47 2pnn_A Transient receptor pote 100.0 1.8E-32 6.2E-37 263.4 13.8 156 2-190 7-196 (273)
48 2etb_A Transient receptor pote 100.0 2.9E-32 9.9E-37 259.4 12.4 93 42-136 1-114 (256)
49 4gpm_A Engineered protein OR26 100.0 5.8E-31 2E-35 232.2 18.5 158 45-315 6-163 (169)
50 2pnn_A Transient receptor pote 100.0 3.1E-32 1E-36 261.8 7.5 92 252-344 146-252 (273)
51 2etb_A Transient receptor pote 100.0 7.3E-31 2.5E-35 249.7 12.9 181 7-191 1-234 (256)
52 4gpm_A Engineered protein OR26 100.0 8.1E-30 2.8E-34 224.8 17.4 157 10-172 6-163 (169)
53 3jxi_A Vanilloid receptor-rela 100.0 6.1E-31 2.1E-35 250.8 10.3 209 40-313 2-250 (260)
54 2aja_A Ankyrin repeat family p 100.0 2E-31 7E-36 265.0 5.5 277 8-343 65-367 (376)
55 3jxi_A Vanilloid receptor-rela 100.0 1.3E-29 4.5E-34 241.5 12.5 184 5-191 2-238 (260)
56 3v30_A DNA-binding protein rfx 100.0 1E-28 3.6E-33 219.6 16.2 170 43-328 2-171 (172)
57 3v30_A DNA-binding protein rfx 100.0 1.5E-28 5.2E-33 218.5 15.4 169 8-181 2-171 (172)
58 4hbd_A KN motif and ankyrin re 100.0 4.1E-29 1.4E-33 240.0 12.1 189 43-310 76-272 (276)
59 2vge_A RELA-associated inhibit 100.0 1.4E-30 4.7E-35 242.6 1.7 187 40-344 18-207 (229)
60 2aja_A Ankyrin repeat family p 100.0 1.5E-30 5E-35 258.9 0.8 277 5-310 89-371 (376)
61 1ihb_A P18-INK4C(INK6), cyclin 100.0 4.7E-28 1.6E-32 213.1 16.3 160 41-313 3-162 (162)
62 2rfm_A Putative ankyrin repeat 100.0 4.1E-28 1.4E-32 219.9 15.3 163 35-311 28-190 (192)
63 2rfm_A Putative ankyrin repeat 100.0 7.1E-28 2.4E-32 218.3 15.3 160 2-166 29-189 (192)
64 3v31_A Ankyrin repeat family A 100.0 1.5E-27 5E-32 211.1 15.7 159 42-313 2-160 (167)
65 2y1l_E Darpin-8.4; hydrolase-i 99.9 3.3E-27 1.1E-31 209.2 17.4 159 40-311 11-169 (169)
66 4hbd_A KN motif and ankyrin re 99.9 4.3E-28 1.5E-32 232.8 12.1 182 7-191 75-263 (276)
67 3v31_A Ankyrin repeat family A 99.9 2.9E-27 1E-31 209.1 16.3 156 7-167 2-158 (167)
68 2y1l_E Darpin-8.4; hydrolase-i 99.9 4E-27 1.4E-31 208.6 16.8 159 3-166 9-168 (169)
69 2vge_A RELA-associated inhibit 99.9 2.8E-29 9.5E-34 233.8 2.3 189 3-199 16-209 (229)
70 3f6q_A Integrin-linked protein 99.9 2.4E-27 8.3E-32 212.2 14.8 170 40-325 2-171 (179)
71 3f6q_A Integrin-linked protein 99.9 2.5E-27 8.6E-32 212.1 13.8 166 6-176 3-169 (179)
72 3twr_A Tankyrase-2; ankyrin re 99.9 1.8E-27 6E-32 210.1 12.1 158 4-166 4-162 (165)
73 1bd8_A P19INK4D CDK4/6 inhibit 99.9 6.9E-27 2.4E-31 204.2 15.2 155 7-166 1-155 (156)
74 3twr_A Tankyrase-2; ankyrin re 99.9 3.9E-27 1.3E-31 207.8 13.7 160 40-312 5-164 (165)
75 1ihb_A P18-INK4C(INK6), cyclin 99.9 6.8E-27 2.3E-31 205.6 14.5 154 7-166 4-159 (162)
76 1awc_B Protein (GA binding pro 99.9 1.9E-26 6.3E-31 200.7 15.9 150 8-163 2-152 (153)
77 1awc_B Protein (GA binding pro 99.9 3.6E-26 1.2E-30 198.9 15.9 151 43-307 2-152 (153)
78 1bd8_A P19INK4D CDK4/6 inhibit 99.9 4.2E-26 1.4E-30 199.2 15.2 154 43-310 2-155 (156)
79 1ycs_B 53BP2, P53BP2; ankyrin 99.9 6.5E-27 2.2E-31 219.7 8.5 182 42-337 4-193 (239)
80 1ycs_B 53BP2, P53BP2; ankyrin 99.9 8.2E-27 2.8E-31 219.0 8.4 181 4-191 1-194 (239)
81 1d9s_A Cyclin-dependent kinase 99.9 5.1E-25 1.8E-29 187.4 9.7 128 3-136 7-135 (136)
82 3t8k_A Uncharacterized protein 99.9 6.2E-25 2.1E-29 196.9 8.4 167 43-313 6-179 (186)
83 1bi7_B P16INK4A, MTS1, multipl 99.9 1.2E-24 4.1E-29 189.9 10.0 140 3-148 7-148 (156)
84 2jab_A H10-2-G3; HER2, darpin, 99.9 3.8E-24 1.3E-28 182.0 12.8 127 4-135 10-136 (136)
85 3t8k_A Uncharacterized protein 99.9 1.8E-24 6.1E-29 193.9 8.3 155 6-166 4-176 (186)
86 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.2E-23 7.6E-28 174.5 13.7 125 7-136 1-125 (126)
87 1bi7_B P16INK4A, MTS1, multipl 99.9 8.2E-24 2.8E-28 184.5 9.9 141 40-185 9-151 (156)
88 1d9s_A Cyclin-dependent kinase 99.9 1.6E-23 5.6E-28 178.1 11.2 129 33-166 3-133 (136)
89 3deo_A Signal recognition part 99.9 2.9E-23 9.9E-28 186.2 10.3 114 40-189 41-154 (183)
90 3ui2_A Signal recognition part 99.9 4.5E-23 1.6E-27 193.9 11.6 139 8-187 15-153 (244)
91 3deo_A Signal recognition part 99.9 6.7E-23 2.3E-27 183.9 11.5 140 5-166 41-181 (183)
92 3c5r_A BARD-1, BRCA1-associate 99.9 1.9E-23 6.6E-28 177.9 6.8 129 3-136 5-133 (137)
93 2jab_A H10-2-G3; HER2, darpin, 99.9 1.5E-22 5E-27 172.1 11.8 124 40-166 11-135 (136)
94 3ui2_A Signal recognition part 99.9 1.3E-22 4.4E-27 190.8 11.6 140 5-166 42-182 (244)
95 3aaa_C Myotrophin, protein V-1 99.9 2.2E-22 7.5E-27 167.8 9.8 117 5-126 4-120 (123)
96 1n0r_A 4ANK, 4 ankyrin repeats 99.9 9.8E-22 3.3E-26 164.4 13.2 123 42-167 1-124 (126)
97 3ehr_A Osteoclast-stimulating 99.9 2.4E-22 8.2E-27 186.3 8.6 129 4-136 69-197 (222)
98 3c5r_A BARD-1, BRCA1-associate 99.9 2.3E-22 7.7E-27 171.2 6.5 123 40-165 7-130 (137)
99 2b0o_E UPLC1; arfgap, structur 99.9 6.3E-22 2.1E-26 191.7 10.5 140 42-191 150-299 (301)
100 3aaa_C Myotrophin, protein V-1 99.9 1.6E-21 5.4E-26 162.6 9.6 111 40-153 4-115 (123)
101 3ehr_A Osteoclast-stimulating 99.8 2.3E-21 8E-26 179.6 7.6 133 40-176 70-204 (222)
102 2b0o_E UPLC1; arfgap, structur 99.8 1.1E-20 3.8E-25 182.9 12.0 141 8-157 151-299 (301)
103 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.5E-20 5.2E-25 148.1 10.5 92 42-136 1-92 (93)
104 1dcq_A PYK2-associated protein 99.8 6.3E-20 2.2E-24 175.5 14.9 206 73-336 62-274 (278)
105 3jue_A Arfgap with coiled-coil 99.8 3.5E-20 1.2E-24 183.4 12.6 124 8-136 199-325 (368)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.8 4.2E-20 1.4E-24 145.5 10.3 93 7-102 1-93 (93)
107 1dcq_A PYK2-associated protein 99.8 5.4E-20 1.9E-24 176.0 13.1 125 8-136 130-262 (278)
108 3lvq_E ARF-GAP with SH3 domain 99.8 2.6E-19 8.9E-24 186.2 13.1 124 9-136 133-264 (497)
109 2l6b_A NR1C; ankyrin, consensu 99.8 5.5E-20 1.9E-24 151.2 4.5 108 250-381 5-112 (115)
110 2l6b_A NR1C; ankyrin, consensu 99.8 1.9E-19 6.5E-24 147.9 7.6 107 4-115 5-111 (115)
111 3jue_A Arfgap with coiled-coil 99.8 7.3E-19 2.5E-23 174.0 12.3 146 41-189 197-348 (368)
112 3lvq_E ARF-GAP with SH3 domain 99.8 2.3E-18 8E-23 179.0 13.6 138 42-189 131-278 (497)
113 2zgd_A 3 repeat synthetic anky 99.7 1.1E-17 3.8E-22 136.0 9.4 89 40-131 21-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 6.3E-17 2.1E-21 131.5 9.6 91 3-96 19-109 (110)
115 3gvo_A Pumilio 2, pumilio homo 89.8 2.3 7.8E-05 41.0 11.2 188 3-191 32-230 (351)
116 3k49_A MRNA-binding protein PU 86.2 6.7 0.00023 38.0 12.1 187 3-190 37-234 (369)
117 3gvo_A Pumilio 2, pumilio homo 68.6 15 0.00052 35.1 8.4 163 3-166 68-239 (351)
118 3k49_A MRNA-binding protein PU 56.4 53 0.0018 31.5 9.8 130 3-133 73-207 (369)
119 4ev6_A Magnesium transport pro 55.4 15 0.00051 35.0 5.5 20 491-510 282-301 (339)
120 2iub_A CORA, divalent cation t 53.2 11 0.00036 36.4 4.1 20 491-510 306-325 (363)
121 2k1a_A Integrin alpha-IIB; sin 49.2 30 0.001 21.3 4.1 16 515-530 8-23 (42)
122 4g26_A Pentatricopeptide repea 46.1 38 0.0013 34.2 7.1 44 226-276 157-200 (501)
123 3v71_A PUF (pumilio/FBF) domai 44.5 28 0.00095 33.7 5.6 188 3-191 26-243 (382)
124 2l8s_A Integrin alpha-1; trans 39.6 32 0.0011 22.4 3.3 19 512-530 4-22 (54)
125 4g26_A Pentatricopeptide repea 34.3 36 0.0012 34.3 4.8 146 12-166 33-200 (501)
126 3bwt_A Protein PUF4; pumilio, 32.8 1.4E+02 0.0047 28.0 8.3 155 3-158 19-183 (333)
127 3k62_A FEM-3 mRNA-binding fact 32.7 78 0.0027 30.9 6.7 151 3-154 35-209 (412)
128 2knc_A Integrin alpha-IIB; tra 27.4 58 0.002 21.2 3.1 17 514-530 9-25 (54)
129 3ux4_A Acid-activated UREA cha 26.7 1.8E+02 0.0061 24.7 6.7 51 487-537 104-161 (195)
130 4hkr_A Calcium release-activat 24.5 3.3E+02 0.011 23.3 15.8 103 441-545 58-173 (214)
131 2lx0_A Membrane fusion protein 24.0 94 0.0032 16.7 3.2 17 526-542 11-27 (32)
132 1gp8_A Protein (scaffolding pr 21.6 62 0.0021 19.2 2.1 17 81-97 17-33 (40)
133 3mkq_B Coatomer subunit alpha; 20.2 3.7E+02 0.013 22.5 7.6 96 14-133 43-139 (177)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.4e-53 Score=438.04 Aligned_cols=363 Identities=19% Similarity=0.148 Sum_probs=286.8
Q ss_pred ccccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhH
Q 046389 3 CEEKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALS 82 (558)
Q Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh 82 (558)
..|.+|+||||+|+..|+.++|++|++. +.+++.. +..|.||||+|+..|+.+++++|++. +++++.+|.+|.||||
T Consensus 9 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~ 85 (437)
T 1n11_A 9 GGGESGLTPLHVASFMGHLPIVKNLLQR-GASPNVS-NVKVETPLHMAARAGHTEVAKYLLQN-KAKVNAKAKDDQTPLH 85 (437)
T ss_dssp ------CCHHHHHHHHTCHHHHHHHHHT-TCCSCCS-SSCCCCHHHHHHHHTCHHHHHHHHHH-TCCSSCCCTTSCCHHH
T ss_pred ccCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCCHHH
Confidence 4678899999999999999999988876 6777776 88999999999999999999999998 8999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHH
Q 046389 83 LAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVAL 161 (558)
Q Consensus 83 ~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~ 161 (558)
+|+..|+.+++++|+++|+++ ...+ ..|.||||+|+..|+.+++++|+++++ ....+..|.||||.|+..|+.++++
T Consensus 86 ~A~~~g~~~~v~~Ll~~ga~~-~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 163 (437)
T 1n11_A 86 CAARIGHTNMVKLLLENNANP-NLAT-TAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAE 163 (437)
T ss_dssp HHHHHTCHHHHHHHHHHTCCT-TCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHCCCHHHHHHHHhCCCCC-CCCC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHH
Confidence 999999999999999999987 4566 799999999999999999999999988 5567788999999999999999999
Q ss_pred HHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhc
Q 046389 162 RLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIR 241 (558)
Q Consensus 162 ~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~ 241 (558)
.|+++ +.+++..+..|.||||+|+..++.+.+ ..+...+...+.. .....++++.|+..++.+++++|++.+.+
T Consensus 164 ~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v-~~Ll~~g~~~~~~----~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 237 (437)
T 1n11_A 164 LLLER-DAHPNAAGKNGLTPLHVAVHHNNLDIV-KLLLPRGGSPHSP----AWNGYTPLHIAAKQNQVEVARSLLQYGGS 237 (437)
T ss_dssp HHHHT-TCCTTCCCSSCCCHHHHHHHTTCHHHH-HHHGGGTCCSCCC----CTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHhC-CCCCCCCCCCCCCHHHHHHHcCCHHHH-HHHHhCCCCCCCc----CCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99997 677788899999999999999987544 3444444443322 33456778888888888888888887766
Q ss_pred cchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcCCcccceeeec
Q 046389 242 SQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYIISKHDDMGRTMFHIAVLNHQVKILELINEMGSMKDRIVSRR 321 (558)
Q Consensus 242 ~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~~~~~in~~ 321 (558)
.+..+ ..|.||||+|+..|+.+++++|+++++++ +..|..|+||||+|+..|+.+++++|+++|++ +|.+
T Consensus 238 ~~~~~-----~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~ 307 (437)
T 1n11_A 238 ANAES-----VQGVTPLHLAAQEGHAEMVALLLSKQANG-NLGNKSGLTPLHLVAQEGHVPVADVLIKHGVM----VDAT 307 (437)
T ss_dssp TTCCC-----TTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCC----TTCC
T ss_pred CCCCC-----CCCCCHHHHHHHCCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCcc----CCCC
Confidence 55433 56677777777777777777777777776 77777777777777777777777777777777 5677
Q ss_pred cCCCCchhhHhhcCCCCCCCcccc-------------chHHHHHHHHHHHHHHHhhc-CCcchhhccCCCCChhhhhHH
Q 046389 322 DYGGNNILHMAGMQPSNEGPNVVF-------------GAVLQLQQEVLWFKKVSEIV-RPVDAEARNYGLQTPRELFTQ 386 (558)
Q Consensus 322 d~~g~TpLh~A~~~~~~~~~~~l~-------------~~~l~~~~~~~~~~~v~~l~-~~~~~~~~n~~g~tpl~~a~~ 386 (558)
|..|+||||+|+..|+.+++++|. ..+++.+......+.|+.++ .|++++.+|.+|+||+++|.+
T Consensus 308 ~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~ 386 (437)
T 1n11_A 308 TRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKR 386 (437)
T ss_dssp CSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHH
Confidence 777777777777777776666551 12344444444445555555 778888888888888888764
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=5.2e-49 Score=405.67 Aligned_cols=321 Identities=20% Similarity=0.194 Sum_probs=241.5
Q ss_pred ccccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhH
Q 046389 3 CEEKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALS 82 (558)
Q Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh 82 (558)
..|..|.||||+|+..|+.+++++|++. +.+++.+ +.+|.||||+|+..|+.++|++|++. +++++..|..|.||||
T Consensus 42 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~t~L~ 118 (437)
T 1n11_A 42 VSNVKVETPLHMAARAGHTEVAKYLLQN-KAKVNAK-AKDDQTPLHCAARIGHTNMVKLLLEN-NANPNLATTAGHTPLH 118 (437)
T ss_dssp CSSSCCCCHHHHHHHHTCHHHHHHHHHH-TCCSSCC-CTTSCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCTTCCCHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCC-CCCCCCHHHHHHHCCCHHHHHHHHhC-CCCCCCCCCCCCcHHH
Confidence 4567889999999999999999988876 6677776 78899999999999999999999998 8888888999999999
Q ss_pred HHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHH
Q 046389 83 LAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVAL 161 (558)
Q Consensus 83 ~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~ 161 (558)
+|+..|+.+++++|++++++. ...+ ..|.||||+|+..|+.+++++|+++++ .+..+..|.||||.|+..++.++++
T Consensus 119 ~A~~~g~~~~v~~Ll~~~~~~-~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 196 (437)
T 1n11_A 119 IAAREGHVETVLALLEKEASQ-ACMT-KKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVK 196 (437)
T ss_dssp HHHHHTCHHHHHHHHHTTCCS-CCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCC-cCCC-CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 999999999999999988875 3445 688889999988888888888888887 5667778888888888888888888
Q ss_pred HHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhc
Q 046389 162 RLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIR 241 (558)
Q Consensus 162 ~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~ 241 (558)
.|+++ +..++..+.+|.||||+|+..++.+.+ ..+.+.+.+.+.. .....++++.|+..++.+++++|++.+.+
T Consensus 197 ~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~-~~Ll~~g~~~~~~----~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~ 270 (437)
T 1n11_A 197 LLLPR-GGSPHSPAWNGYTPLHIAAKQNQVEVA-RSLLQYGGSANAE----SVQGVTPLHLAAQEGHAEMVALLLSKQAN 270 (437)
T ss_dssp HHGGG-TCCSCCCCTTCCCHHHHHHHTTCHHHH-HHHHHTTCCTTCC----CTTCCCHHHHHHHTTCHHHHHHHHTTTCC
T ss_pred HHHhC-CCCCCCcCCCCCCHHHHHHHcCCHHHH-HHHHHcCCCCCCC----CCCCCCHHHHHHHCCCHHHHHHHHhcCCC
Confidence 88887 455666777888888888888876443 3334444444332 33455667777777777777777766655
Q ss_pred cchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcCCcccceeeec
Q 046389 242 SQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYIISKHDDMGRTMFHIAVLNHQVKILELINEMGSMKDRIVSRR 321 (558)
Q Consensus 242 ~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~~~~~in~~ 321 (558)
.+.. +..|.||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+.+|+.+++++|+++|++ +|.+
T Consensus 271 ~~~~-----~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad----~n~~ 340 (437)
T 1n11_A 271 GNLG-----NKSGLTPLHLVAQEGHVPVADVLIKHGVMV-DATTRMGYTPLHVASHYGNIKLVKFLLQHQAD----VNAK 340 (437)
T ss_dssp TTCC-----CTTCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCC----TTCC
T ss_pred CCCC-----CCCCCCHHHHHHHcCCHHHHHHHHhCCccC-CCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCC----CCCC
Confidence 4432 355667777777777777777777776666 66666677777777777777777777777666 5566
Q ss_pred cCCCCchhhHhhcCCCCCCCccc
Q 046389 322 DYGGNNILHMAGMQPSNEGPNVV 344 (558)
Q Consensus 322 d~~g~TpLh~A~~~~~~~~~~~l 344 (558)
|..|+||||+|+..|+.+++++|
T Consensus 341 ~~~g~t~L~~A~~~g~~~iv~~L 363 (437)
T 1n11_A 341 TKLGYSPLHQAAQQGHTDIVTLL 363 (437)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCCCHHHHHHHCChHHHHHHH
Confidence 66777777777776666666655
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=5.1e-45 Score=362.36 Aligned_cols=287 Identities=20% Similarity=0.162 Sum_probs=253.6
Q ss_pred ccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHH
Q 046389 5 EKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLA 84 (558)
Q Consensus 5 d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A 84 (558)
+.+|.|+||.|++.|+.++|+.||+. |.+++.+.+..|.||||+|+..|+.++|++|+++ +++++.++..+.+|++.+
T Consensus 22 ~~~~~t~L~~Av~~g~~~~V~~LL~~-Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~-ga~~~~~~~~~~~~~~~~ 99 (337)
T 4g8k_A 22 AVEDNHLLIKAVQNEDVDLVQQLLEG-GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH-GADPVLRKKNGATPFILA 99 (337)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHH
T ss_pred CCCCChHHHHHHHcCCHHHHHHHHHC-CCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHc-CCchhhhccCCCchhHHH
Confidence 45689999999999999999988876 7888887456699999999999999999999999 999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc-cc----------cCccchhHHHHHHHH
Q 046389 85 AASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE-GQ----------LDNKDLIELLIILIK 153 (558)
Q Consensus 85 ~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~----------~~~~~~~t~l~~a~~ 153 (558)
+..++.++++.+++.++++ ...+ ..|.||||+|+..|+.+++++|+++++ .+ ..+..|.||||.|+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~-~~~d-~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~ 177 (337)
T 4g8k_A 100 AIAGSVKLLKLFLSKGADV-NECD-FYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 177 (337)
T ss_dssp HHHTCHHHHHHHHTTTCCT-TCBC-TTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHH
T ss_pred HhcccchhhHHhhhccchh-hhhc-cCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHH
Confidence 9999999999999999987 4566 899999999999999999999999987 22 234568999999999
Q ss_pred hccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHH
Q 046389 154 TDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVE 233 (558)
Q Consensus 154 ~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~ 233 (558)
.|+.++++.|+++.+.+++.+|..|.||+|.++..+.. ....++++
T Consensus 178 ~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~----------------------------------~~~~~i~~ 223 (337)
T 4g8k_A 178 KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDD----------------------------------SDVEAITH 223 (337)
T ss_dssp HTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCT----------------------------------TTHHHHHH
T ss_pred CCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCc----------------------------------ccHHHHHH
Confidence 99999999999988999999999999999988765543 23346888
Q ss_pred HHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHh-CCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcCC
Q 046389 234 IIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIRE-YPYIISKHDDMGRTMFHIAVLNHQVKILELINEMGS 312 (558)
Q Consensus 234 ~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~-~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga 312 (558)
+|++.|++++.. +..|.||||+|+..|+.++++.|++. +.++ +.+|.+|+||||+|+++|+.+++++|+++|+
T Consensus 224 lLl~~gad~n~~-----d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~v-n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA 297 (337)
T 4g8k_A 224 LLLDHGADVNVR-----GERGKTPLILAVEKKHLGLVQRLLEQEHIEI-NDTDSDGKTALLLAVELKLKKIAELLCKRGA 297 (337)
T ss_dssp HHHHTTCCTTCC-----CGGGCCHHHHHHHTTCHHHHHHHHTSTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHTTSC
T ss_pred HHHHCCCCCCCc-----CCCCCCHHHHHHHhhhhHHHHHHHHhcCCcc-cCcCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 999999887654 46889999999999999999999986 6776 9999999999999999999999999999999
Q ss_pred cccceeeeccCCCCchhhHhhcCCCCCCCccc
Q 046389 313 MKDRIVSRRDYGGNNILHMAGMQPSNEGPNVV 344 (558)
Q Consensus 313 ~~~~~in~~d~~g~TpLh~A~~~~~~~~~~~l 344 (558)
++ | +.||||+|++.++.+++++|
T Consensus 298 d~----n-----~~~~L~~A~~~~~~~iv~~L 320 (337)
T 4g8k_A 298 ST----D-----CGDLVMTARRNYDHSLVKVL 320 (337)
T ss_dssp SS----T-----TCCHHHHHHHTTCHHHHHHH
T ss_pred CC----C-----CCCHHHHHHHcCCHHHHHHH
Confidence 83 3 45799999999997655554
No 4
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=3e-45 Score=365.99 Aligned_cols=307 Identities=17% Similarity=0.151 Sum_probs=228.6
Q ss_pred cccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHH
Q 046389 4 EEKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSL 83 (558)
Q Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~ 83 (558)
++..+.++||.|+..|+.+.+++++.+.+.+++.. |..|.||||+|+..|+.++|++|++. +++++.+|..|.||||+
T Consensus 20 ~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~ 97 (351)
T 3utm_A 20 TGEYKKDELLEAARSGNEEKLMALLTPLNVNCHAS-DGRKSTPLHLAAGYNRVRIVQLLLQH-GADVHAKDKGGLVPLHN 97 (351)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCS-STTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHH
T ss_pred eccccchhHHHHHHcCCHHHHHHHHHhcCCCcccC-CCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCcHHHH
Confidence 45678889999999999999998988877777777 88899999999999999999999998 88899999999999999
Q ss_pred HHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHHH
Q 046389 84 AAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVALR 162 (558)
Q Consensus 84 A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~ 162 (558)
|+..|+.+++++|+++|+++ ...+ ..|.||||+|+..|+.+++++|+++++ .+..+..|.++++.++..+..+....
T Consensus 98 A~~~g~~~iv~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~ 175 (351)
T 3utm_A 98 ACSYGHYEVTELLLKHGACV-NAMD-LWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTY 175 (351)
T ss_dssp HHHTTCHHHHHHHHHTTCCT-TCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHCCCCC-CCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHh
Confidence 99999999999999999886 4455 789999999999999999999998887 55566677777777666655555544
Q ss_pred HHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhcc
Q 046389 163 LFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRS 242 (558)
Q Consensus 163 Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~ 242 (558)
.... +++..++..++. +.++.++......
T Consensus 176 ~~~~-------------~~~~~~~~~~~~--------------------------------------~~~~~~l~~~~~~ 204 (351)
T 3utm_A 176 EFKG-------------HSLLQAAREADL--------------------------------------AKVKKTLALEIIN 204 (351)
T ss_dssp HHHH-------------HHHHHHHHTTCH--------------------------------------HHHHHHTTTCCTT
T ss_pred hhcc-------------cHHHHHHHhccH--------------------------------------HHHHHHHHhhccc
Confidence 3332 233333333332 3333333222111
Q ss_pred chhhhhhhccCCchHHHHHHhc---ChHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcCCcccceee
Q 046389 243 QDSEISTLIERPFQLTFVAAEK---GNIEFLRVLIREYPYIISKHDDMGRTMFHIAVLNHQVKILELINEMGSMKDRIVS 319 (558)
Q Consensus 243 ~~~~~~~~~~~g~tpLh~Aa~~---g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~~~~~in 319 (558)
...+..|.||||+|+.. ++.+++++|+++|+++ +.+|..|+||||+|+.+|+.+++++|+++|++ +|
T Consensus 205 -----~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~----~n 274 (351)
T 3utm_A 205 -----FKQPQSHETALHCAVASLHPKRKQVAELLLRKGANV-NEKNKDFMTPLHVAAERAHNDVMEVLHKHGAK----MN 274 (351)
T ss_dssp -----CCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TT
T ss_pred -----ccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CC
Confidence 11335667888888887 5678888888888887 77788888888888888888888888888887 66
Q ss_pred eccCCCCchhhHhhcCCCCCCCccccchHHHHHHHHHHHHHHHhhcCCcchhhccCCCCChhhhhHHhhhhhhhh
Q 046389 320 RRDYGGNNILHMAGMQPSNEGPNVVFGAVLQLQQEVLWFKKVSEIVRPVDAEARNYGLQTPRELFTQSHRSLIED 394 (558)
Q Consensus 320 ~~d~~g~TpLh~A~~~~~~~~~~~l~~~~l~~~~~~~~~~~v~~l~~~~~~~~~n~~g~tpl~~a~~~~~~l~~~ 394 (558)
.+|..|+||||+|+..++.+++++| +..|++++.+|.+|+||+++|.+...+++.+
T Consensus 275 ~~d~~g~t~L~~A~~~~~~~~v~~L-------------------l~~gad~~~~~~~g~tal~~a~~~~~~~l~~ 330 (351)
T 3utm_A 275 ALDSLGQTALHRAALAGHLQTCRLL-------------------LSYGSDPSIISLQGFTAAQMGNEAVQQILSE 330 (351)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHSCHHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCcHHHHHHH-------------------HHcCCCCCCcCCCCCChhhhhhHHHHHHHHh
Confidence 7888888888888888775544443 3367788888888888888876554444443
No 5
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.2e-43 Score=341.64 Aligned_cols=270 Identities=21% Similarity=0.190 Sum_probs=244.0
Q ss_pred ccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHH
Q 046389 5 EKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLA 84 (558)
Q Consensus 5 d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A 84 (558)
+.+|.|+||.|+..|+.+++++|++. +.+++...+..|.||||+|+..|+.+++++|++. +.+++.+|..|.||||+|
T Consensus 2 ~~~g~~~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A 79 (285)
T 1wdy_A 2 AVEDNHLLIKAVQNEDVDLVQQLLEG-GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH-GADPVLRKKNGATPFLLA 79 (285)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHH
T ss_pred CcccchHHHHHHHcCCHHHHHHHHHc-CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHH
Confidence 45789999999999999999988876 5567666578899999999999999999999999 899999999999999999
Q ss_pred HHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc-cccC----------ccchhHHHHHHHH
Q 046389 85 AASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE-GQLD----------NKDLIELLIILIK 153 (558)
Q Consensus 85 ~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~----------~~~~~t~l~~a~~ 153 (558)
+..|+.+++++|+++|+++ ...+ ..|.||||+|+..|+.+++++|+++++ .+.. +..|.||||.|+.
T Consensus 80 ~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 157 (285)
T 1wdy_A 80 AIAGSVKLLKLFLSKGADV-NECD-FYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 157 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCT-TCBC-TTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCC-CccC-cccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHH
Confidence 9999999999999999987 4566 899999999999999999999999998 3333 6779999999999
Q ss_pred hccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHH
Q 046389 154 TDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVE 233 (558)
Q Consensus 154 ~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~ 233 (558)
.++.++++.|++..+.+++..|..|.||||.|+..++. ....++++
T Consensus 158 ~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~----------------------------------~~~~~i~~ 203 (285)
T 1wdy_A 158 KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDD----------------------------------SDVEAITH 203 (285)
T ss_dssp HTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCT----------------------------------TTHHHHHH
T ss_pred cCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcccc----------------------------------chHHHHHH
Confidence 99999999999988888999999999999999998874 22348899
Q ss_pred HHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHH-hCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcCC
Q 046389 234 IIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIR-EYPYIISKHDDMGRTMFHIAVLNHQVKILELINEMGS 312 (558)
Q Consensus 234 ~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~-~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga 312 (558)
+|++.+.+++..+ ..|.||||+|+..|+.+++++|++ .|+++ +.+|..|+||||+|+.+|+.+++++|+++|+
T Consensus 204 ~Ll~~g~~~~~~~-----~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga 277 (285)
T 1wdy_A 204 LLLDHGADVNVRG-----ERGKTPLILAVEKKHLGLVQRLLEQEHIEI-NDTDSDGKTALLLAVELKLKKIAELLCKRGA 277 (285)
T ss_dssp HHHHTTCCSSCCC-----TTSCCHHHHHHHTTCHHHHHHHHHSSSCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSS
T ss_pred HHHHcCCCCCCcC-----CCCCcHHHHHHHcCCHHHHHHHHhccCCCc-cccCCCCCcHHHHHHHcCcHHHHHHHHHcCC
Confidence 9999988776544 688999999999999999999999 78887 9999999999999999999999999999999
Q ss_pred cccceeeecc
Q 046389 313 MKDRIVSRRD 322 (558)
Q Consensus 313 ~~~~~in~~d 322 (558)
+ ++.+|
T Consensus 278 ~----~~~~d 283 (285)
T 1wdy_A 278 S----TDCGD 283 (285)
T ss_dssp C----SCCSS
T ss_pred C----CCccc
Confidence 9 55665
No 6
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.7e-42 Score=330.77 Aligned_cols=264 Identities=16% Similarity=0.118 Sum_probs=234.4
Q ss_pred CCCchHHHHHHHCCCHHHHHHHhcCCCcccccc-cCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHH
Q 046389 41 KLGETALHVAASAGRIDFVKNLLGYSPQVLKLT-DYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAG 119 (558)
Q Consensus 41 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~-d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A 119 (558)
.+|+||||.|++.|+.+++++|++. +.+++.. +..|.||||+|+..|+.+++++|+++|+++ ...+ ..|.||||+|
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A 79 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLLEG-GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRK-KNGATPFLLA 79 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTCCCHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHc-CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccC-CCCCCHHHHH
Confidence 3578999999999999999999998 7888877 888999999999999999999999999986 4566 7999999999
Q ss_pred HHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccc----------cCCCCcHHHHHhcC
Q 046389 120 AMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLR----------DSNEETALHALAGK 188 (558)
Q Consensus 120 ~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~----------d~~g~t~L~~a~~~ 188 (558)
+..|+.+++++|+++++ .+..+..|.||||.|+..++.++++.|++. +..++.. +..|.||||.|+..
T Consensus 80 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 158 (285)
T 1wdy_A 80 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKR-GANVNLRRKTKEDQERLRKGGATALMDAAEK 158 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCCCCCHHHHHTTCCCCCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHh-CCCcccccccHHHHHhhccCCCcHHHHHHHc
Confidence 99999999999999998 666788999999999999999999999998 4444544 77899999999987
Q ss_pred CCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHH-hhccchhhhhhhccCCchHHHHHHhcCh-
Q 046389 189 SMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKE-VIRSQDSEISTLIERPFQLTFVAAEKGN- 266 (558)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~-~~~~~~~~~~~~~~~g~tpLh~Aa~~g~- 266 (558)
|+. +++++|++. +.+++. .+..|.||||.|+..++
T Consensus 159 ~~~--------------------------------------~~v~~Ll~~~~~~~~~-----~~~~g~t~l~~a~~~~~~ 195 (285)
T 1wdy_A 159 GHV--------------------------------------EVLKILLDEMGADVNA-----CDNMGRNALIHALLSSDD 195 (285)
T ss_dssp TCH--------------------------------------HHHHHHHHTSCCCTTC-----CCTTSCCHHHHHHHCSCT
T ss_pred CCH--------------------------------------HHHHHHHHhcCCCCCc-----cCCCCCCHHHHHHHcccc
Confidence 765 888999887 666554 34788999999999999
Q ss_pred ---HHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHh-cCCcccceeeeccCCCCchhhHhhcCCCCCCCc
Q 046389 267 ---IEFLRVLIREYPYIISKHDDMGRTMFHIAVLNHQVKILELINE-MGSMKDRIVSRRDYGGNNILHMAGMQPSNEGPN 342 (558)
Q Consensus 267 ---~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~-~ga~~~~~in~~d~~g~TpLh~A~~~~~~~~~~ 342 (558)
.+++++|+++|+++ +.+|..|+||||+|+.+|+.+++++|++ .|++ ++.+|..|+||||+|+..++.++++
T Consensus 196 ~~~~~i~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~----~~~~~~~g~t~l~~A~~~~~~~i~~ 270 (285)
T 1wdy_A 196 SDVEAITHLLLDHGADV-NVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE----INDTDSDGKTALLLAVELKLKKIAE 270 (285)
T ss_dssp TTHHHHHHHHHHTTCCS-SCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCC----TTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred chHHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCC----ccccCCCCCcHHHHHHHcCcHHHHH
Confidence 99999999999998 8999999999999999999999999999 8988 7799999999999999999876555
Q ss_pred cccchHHHHHHHHHHHHHHHhhcCCcchhhccC
Q 046389 343 VVFGAVLQLQQEVLWFKKVSEIVRPVDAEARNY 375 (558)
Q Consensus 343 ~l~~~~l~~~~~~~~~~~v~~l~~~~~~~~~n~ 375 (558)
+| +..|++++.+|.
T Consensus 271 ~L-------------------l~~Ga~~~~~d~ 284 (285)
T 1wdy_A 271 LL-------------------CKRGASTDCGDL 284 (285)
T ss_dssp HH-------------------HHHSSCSCCSSC
T ss_pred HH-------------------HHcCCCCCcccc
Confidence 44 337888887763
No 7
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.2e-41 Score=324.79 Aligned_cols=179 Identities=15% Similarity=0.065 Sum_probs=118.8
Q ss_pred cCCcHHHHHHHHcCCHHHHHHHHhhCch----------hhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccC
Q 046389 6 KSTLSKLYRAALDDDWQTAETIFESHED----------YVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDY 75 (558)
Q Consensus 6 ~~g~t~L~~A~~~g~~~~v~~ll~~~~~----------~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~ 75 (558)
..|.|+||+|+..|+.+.+..++...+. .++.. |.+|+||||+|+..|+.+++++|++. +.+++.+|.
T Consensus 13 ~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~~~ 90 (285)
T 3d9h_A 13 GLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGD-AVSDWSPMHEAAIHGHQLSLRNLISQ-GWAVNIITA 90 (285)
T ss_dssp -----------------------------CCSEECCCCTTCSS-SCCSCCHHHHHHHTTCHHHHHHHHHT-TCCSCEECT
T ss_pred hHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCC-CccCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCC
Confidence 4689999999999998888876554322 23334 88999999999999999999999998 899999999
Q ss_pred CCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCccccCccchhHHHHHHHHhc
Q 046389 76 FGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTD 155 (558)
Q Consensus 76 ~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~ 155 (558)
+|.||||+|+..|+.+++++|+++|+++ ...+ ..|.||||+|+..|+.+++++|++.++....+..|.||||.|+..|
T Consensus 91 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g 168 (285)
T 3d9h_A 91 DHVSPLHEACLGGHLSCVKILLKHGAQV-NGVT-ADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRG 168 (285)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHT
T ss_pred CCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCC-CCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcC
Confidence 9999999999999999999999999987 4566 8999999999999999999999999873333344666666666666
Q ss_pred cHHHHHHHHhhCCcccccccCCCCcHHHHHhcCC
Q 046389 156 LYEVALRLFKDHPQLATLRDSNEETALHALAGKS 189 (558)
Q Consensus 156 ~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~ 189 (558)
+.++++.|++. +.+++.+|..|.||||+|+..|
T Consensus 169 ~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~ 201 (285)
T 3d9h_A 169 HVECVNSLIAY-GGNIDHKISHLGTPLYLACENQ 201 (285)
T ss_dssp CHHHHHHHHHT-TCCTTCCBTTTBCHHHHHHHTT
T ss_pred CHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcC
Confidence 66666666665 3344444444444444444443
No 8
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=318.30 Aligned_cols=247 Identities=19% Similarity=0.092 Sum_probs=194.9
Q ss_pred CCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHH
Q 046389 7 STLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAA 86 (558)
Q Consensus 7 ~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~ 86 (558)
+|+||||+|+..|+.++++.|++. +.+++.. |.+|.||||+|+..|+.+++++|++. +++++.+|..|.||||+|+.
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~ 78 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQ-GWAVNII-TADHVSPLHEACLGGHLSCVKILLKH-GAQVNGVTADWHTPLFNACV 78 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT-TCCSSCC-CTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHH
Confidence 577888888888888888877765 5566665 77788888888888888888888877 77777778888888888888
Q ss_pred cCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhh
Q 046389 87 SGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKD 166 (558)
Q Consensus 87 ~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 166 (558)
.|+.+++++|+++|++++ .+ ..|.||||+|+..|+.+++++|+++++
T Consensus 79 ~~~~~~v~~Ll~~g~~~~--~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~------------------------------ 125 (261)
T 2xai_A 79 SGSWDCVNLLLQHGASVQ--PE-SDLASPIHEAARRGHVECVNSLIAYGG------------------------------ 125 (261)
T ss_dssp HTCHHHHHHHHHTTCCSS--CS-CTTCCHHHHHHHTTCHHHHHHHHHTTC------------------------------
T ss_pred cCCHHHHHHHHHCCCCCC--CC-CCCCCHHHHHHHcCcHHHHHHHHHcCC------------------------------
Confidence 888888888888877753 23 457788888888887777777776654
Q ss_pred CCcccccccCCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhh
Q 046389 167 HPQLATLRDSNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSE 246 (558)
Q Consensus 167 ~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~ 246 (558)
+++.+|..|.||||+|+..++. +++++|++.+++++.
T Consensus 126 ---~~~~~~~~g~t~L~~A~~~~~~--------------------------------------~~v~~Ll~~g~~~~~-- 162 (261)
T 2xai_A 126 ---NIDHKISHLGTPLYLACENQQR--------------------------------------ACVKKLLESGADVNQ-- 162 (261)
T ss_dssp ---CTTCCBTTTBCHHHHHHHTTCH--------------------------------------HHHHHHHHHTCCTTC--
T ss_pred ---CCCcCCCCCCCHHHHHHHhCCH--------------------------------------HHHHHHHHcCCCCCC--
Confidence 4556778888888888887765 788888888877762
Q ss_pred hhhhccCCchHHHHHHhcChHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcCCcccc----eeeecc
Q 046389 247 ISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYIISKHDDMGRTMFHIAVLNHQVKILELINEMGSMKDR----IVSRRD 322 (558)
Q Consensus 247 ~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~~~~----~in~~d 322 (558)
+..|.||||+|+..|+.+++++|+++|+++ +.+|.+|+||||+|+.++ +++++|++++.++.. .++.+|
T Consensus 163 ----~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~-~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~~~l~~~~~~~~r~ 235 (261)
T 2xai_A 163 ----GKGQDSPLHAVARTASEELACLLMDFGADT-QAKNAEGKRPVELVPPES--PLAQLFLEREGPPSLMQLCRLRIRK 235 (261)
T ss_dssp ----CBTTBCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCGGGGSCTTC--THHHHHHHC-CCCCHHHHHHHHHHT
T ss_pred ----CCCCCChHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCChhhhccccc--cHHHHHHhccCCccHHHHHHHHHHH
Confidence 467899999999999999999999999998 999999999999999654 599999998775421 266899
Q ss_pred CCCCchhhHhhcCCCCC
Q 046389 323 YGGNNILHMAGMQPSNE 339 (558)
Q Consensus 323 ~~g~TpLh~A~~~~~~~ 339 (558)
..|+||+|+|.+...++
T Consensus 236 ~~g~t~l~~~~~~~~p~ 252 (261)
T 2xai_A 236 CFGIQQHHKITKLVLPE 252 (261)
T ss_dssp TSCTTCGGGGGGSSSCH
T ss_pred HhchhccccCcccCCcH
Confidence 99999999999877653
No 9
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=9.4e-40 Score=326.16 Aligned_cols=269 Identities=17% Similarity=0.166 Sum_probs=240.8
Q ss_pred ccccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhH
Q 046389 3 CEEKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALS 82 (558)
Q Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh 82 (558)
.+|..|+||||+|+..|+.++++.|++. +.+++.. |..|.||||+|+..|+.+++++|++. +++++.+|..|.||||
T Consensus 53 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~g~t~L~ 129 (351)
T 3utm_A 53 ASDGRKSTPLHLAAGYNRVRIVQLLLQH-GADVHAK-DKGGLVPLHNACSYGHYEVTELLLKH-GACVNAMDLWQFTPLH 129 (351)
T ss_dssp CSSTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHH
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcc-CCCCCcHHHHHHHCCCHHHHHHHHHC-CCCCCCCCCCCCCHHH
Confidence 5678899999999999999999988876 7788877 88999999999999999999999999 8999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHH
Q 046389 83 LAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALR 162 (558)
Q Consensus 83 ~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ 162 (558)
+|+..|+.+++++|+++|+++ ...+ ..|.||+++|+..+..+.+++... ..++..++..+..+.+..
T Consensus 130 ~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~~~l~~a~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~ 196 (351)
T 3utm_A 130 EAASKNRVEVCSLLLSHGADP-TLVN-CHGKSAVDMAPTPELRERLTYEFK-----------GHSLLQAAREADLAKVKK 196 (351)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHCSSHHHHHHHHHHHH-----------HHHHHHHHHTTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCC-cccc-CCCCcchHHHhhhhhHHHHHhhhc-----------ccHHHHHHHhccHHHHHH
Confidence 999999999999999999996 4566 899999999999888888877653 356778888889999999
Q ss_pred HHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhcc
Q 046389 163 LFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRS 242 (558)
Q Consensus 163 Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~ 242 (558)
++..... ....+..|.||||+|+..++. +..+++++|++.+.++
T Consensus 197 ~l~~~~~-~~~~~~~~~t~L~~A~~~~~~-----------------------------------~~~~~~~~Ll~~g~~~ 240 (351)
T 3utm_A 197 TLALEII-NFKQPQSHETALHCAVASLHP-----------------------------------KRKQVAELLLRKGANV 240 (351)
T ss_dssp HTTTCCT-TCCCTTTCCCHHHHHHHCCST-----------------------------------THHHHHHHHHHTTCCT
T ss_pred HHHhhcc-cccCCCCCCCHHHHHHHHhCc-----------------------------------cHHHHHHHHHHcCCCc
Confidence 8887443 345678899999999998753 3458999999998877
Q ss_pred chhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcCCcccceeeecc
Q 046389 243 QDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYIISKHDDMGRTMFHIAVLNHQVKILELINEMGSMKDRIVSRRD 322 (558)
Q Consensus 243 ~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~~~~~in~~d 322 (558)
+.. +..|.||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|
T Consensus 241 ~~~-----~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad----~~~~~ 310 (351)
T 3utm_A 241 NEK-----NKDFMTPLHVAAERAHNDVMEVLHKHGAKM-NALDSLGQTALHRAALAGHLQTCRLLLSYGSD----PSIIS 310 (351)
T ss_dssp TCC-----CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC----TTCCC
T ss_pred CCc-----CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC----CCCcC
Confidence 654 478999999999999999999999999998 99999999999999999999999999999999 67999
Q ss_pred CCCCchhhHhh
Q 046389 323 YGGNNILHMAG 333 (558)
Q Consensus 323 ~~g~TpLh~A~ 333 (558)
..|+||+|+|.
T Consensus 311 ~~g~tal~~a~ 321 (351)
T 3utm_A 311 LQGFTAAQMGN 321 (351)
T ss_dssp TTSCCHHHHSC
T ss_pred CCCCChhhhhh
Confidence 99999999983
No 10
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=4.2e-40 Score=326.98 Aligned_cols=271 Identities=14% Similarity=0.088 Sum_probs=233.7
Q ss_pred CCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccC-CCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHH
Q 046389 40 SKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDY-FGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHA 118 (558)
Q Consensus 40 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~-~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~ 118 (558)
+.+|+|+||.|++.|+.++|++||++ |+++|.++. .|.||||+|+..|+.+++++|+++|+++ ...+ ..+.+|++.
T Consensus 22 ~~~~~t~L~~Av~~g~~~~V~~LL~~-Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~-~~~~-~~~~~~~~~ 98 (337)
T 4g8k_A 22 AVEDNHLLIKAVQNEDVDLVQQLLEG-GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRK-KNGATPFIL 98 (337)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTCCCHHHH
T ss_pred CCCCChHHHHHHHcCCHHHHHHHHHC-CCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCch-hhhc-cCCCchhHH
Confidence 44589999999999999999999998 899998876 4999999999999999999999999997 4566 899999999
Q ss_pred HHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHHHHHhhCCcccc----------cccCCCCcHHHHHhc
Q 046389 119 GAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLAT----------LRDSNEETALHALAG 187 (558)
Q Consensus 119 A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~----------~~d~~g~t~L~~a~~ 187 (558)
++..++.+++..+++.++ .+..+..|.||+|.|+..++.++++.+++. +.+++ ..+..|.||||+|+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~-ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~ 177 (337)
T 4g8k_A 99 AAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKR-GANVNLRRKTKEDQERLRKGGATALMDAAE 177 (337)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCCCCC-----CTTCSCCHHHHHHH
T ss_pred HHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHc-CCCcchhhccccccccccCCCCcHHHHHHH
Confidence 999999999999999988 677889999999999999999999999987 33333 345678999999998
Q ss_pred CCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHH-hhccchhhhhhhccCCchHHHHHHhcCh
Q 046389 188 KSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKE-VIRSQDSEISTLIERPFQLTFVAAEKGN 266 (558)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~-~~~~~~~~~~~~~~~g~tpLh~Aa~~g~ 266 (558)
.|+. +++++|+++ +++++. .+..|.||+|.++..++
T Consensus 178 ~g~~--------------------------------------~~v~~LL~~~gad~n~-----~d~~g~t~l~~~~~~~~ 214 (337)
T 4g8k_A 178 KGHV--------------------------------------EVLKILLDEMGADVNA-----CDNMGRNALIHALLSSD 214 (337)
T ss_dssp HTCH--------------------------------------HHHHHHHHHSCCCTTC-----CCTTSCCHHHHHHHHSC
T ss_pred CCCH--------------------------------------HHHHHHHhccCCCcCc-----cCCCCCcHHHHHHHHcC
Confidence 8765 889999865 666554 44788999998876543
Q ss_pred ----HHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhc-CCcccceeeeccCCCCchhhHhhcCCCCCCC
Q 046389 267 ----IEFLRVLIREYPYIISKHDDMGRTMFHIAVLNHQVKILELINEM-GSMKDRIVSRRDYGGNNILHMAGMQPSNEGP 341 (558)
Q Consensus 267 ----~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~-ga~~~~~in~~d~~g~TpLh~A~~~~~~~~~ 341 (558)
.+++++|+++|+++ +.+|..|+||||+|+..|+.++++.|++. |++ +|.+|.+|+||||+|++.|+.+++
T Consensus 215 ~~~~~~i~~lLl~~gad~-n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~----vn~~d~~G~TpL~~A~~~g~~~iv 289 (337)
T 4g8k_A 215 DSDVEAITHLLLDHGADV-NVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE----INDTDSDGKTALLLAVELKLKKIA 289 (337)
T ss_dssp TTTHHHHHHHHHHTTCCT-TCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCC----TTCBCTTSCBHHHHHHHTTCHHHH
T ss_pred cccHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCc----ccCcCCCCCCHHHHHHHcCCHHHH
Confidence 56899999999998 99999999999999999999999999985 777 789999999999999999997665
Q ss_pred ccccchHHHHHHHHHHHHHHHhhcCCcchhhccCCCCChhhhhHH
Q 046389 342 NVVFGAVLQLQQEVLWFKKVSEIVRPVDAEARNYGLQTPRELFTQ 386 (558)
Q Consensus 342 ~~l~~~~l~~~~~~~~~~~v~~l~~~~~~~~~n~~g~tpl~~a~~ 386 (558)
++| +..|++++. +|||++|.+
T Consensus 290 ~~L-------------------l~~GAd~n~-----~~~L~~A~~ 310 (337)
T 4g8k_A 290 ELL-------------------CKRGASTDC-----GDLVMTARR 310 (337)
T ss_dssp HHH-------------------HTTSCSSTT-----CCHHHHHHH
T ss_pred HHH-------------------HHCCCCCCC-----CCHHHHHHH
Confidence 554 347877654 569999875
No 11
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=2.2e-40 Score=320.23 Aligned_cols=248 Identities=18% Similarity=0.125 Sum_probs=145.6
Q ss_pred CCCCchHHHHHHHCCCHHHHHHHhcCCCcc---cccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHH
Q 046389 40 SKLGETALHVAASAGRIDFVKNLLGYSPQV---LKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPI 116 (558)
Q Consensus 40 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~---~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpL 116 (558)
|.+|+||||+|+..|+.++|++|++. +.+ ++.+|..|.||||+|+..|+.+++++|+++|+++ ...+ ..|.|||
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~-~~g~tpL 82 (282)
T 1oy3_D 6 TEDGDTALHLAVIHQHEPFLDFLLGF-SAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAE-RGGHTAL 82 (282)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHH-HTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCC-TTSCCHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhc-CCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCC-CCCCCHH
Confidence 44444455555544454444444443 222 4444444455555555555555555555444443 2233 4444555
Q ss_pred HHHHHcCChHHHHHHHhcCcc--------------ccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHH
Q 046389 117 HAGAMSGHKEVVLYLYSITEG--------------QLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETAL 182 (558)
Q Consensus 117 h~A~~~g~~~~v~~Ll~~~~~--------------~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L 182 (558)
|+|+..|+.+++++|+++++. ......+.++++.+...+.......++...+.+++.++..|.|||
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L 162 (282)
T 1oy3_D 83 HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPL 162 (282)
T ss_dssp HHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHH
T ss_pred HHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHH
Confidence 555544555555554444431 112234455666666555555555555555677788899999999
Q ss_pred HHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHH
Q 046389 183 HALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAA 262 (558)
Q Consensus 183 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa 262 (558)
|+|+..|+. +++++|++.+++++..+. ..|.||||+|+
T Consensus 163 ~~A~~~g~~--------------------------------------~~v~~Ll~~g~~~~~~~~----~~g~tpL~~A~ 200 (282)
T 1oy3_D 163 HVAVIHKDA--------------------------------------EMVRLLRDAGADLNKPEP----TCGRTPLHLAV 200 (282)
T ss_dssp HHHHHTTCH--------------------------------------HHHHHHHHHTCCTTCCCT----TTCCCHHHHHH
T ss_pred HHHHHcCCH--------------------------------------HHHHHHHHcCCCCCCCCC----CCCcCHHHHHH
Confidence 999998876 899999999988775542 34899999999
Q ss_pred hcChHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcCCcccceeeeccCCCCchhhHhhcCCC
Q 046389 263 EKGNIEFLRVLIREYPYIISKHDDMGRTMFHIAVLNHQVKILELINEMGSMKDRIVSRRDYGGNNILHMAGMQPS 337 (558)
Q Consensus 263 ~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~~~~~in~~d~~g~TpLh~A~~~~~ 337 (558)
..|+.+++++|+++|+++ +.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|..|.|||++|....+
T Consensus 201 ~~~~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 201 EAQAASVLELLLKAGADP-TARMYGGRTPLGSALLRPNPILARLLRAHGAP----EPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCC----CCCCC---------------
T ss_pred HcCCHHHHHHHHHcCCCC-cccccCCCCHHHHHHHcCCcHHHHHHHHcCCC----cCcCCCcccccccccCCccc
Confidence 999999999999999998 99999999999999999999999999999999 78999999999999987654
No 12
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=8.3e-41 Score=336.24 Aligned_cols=260 Identities=16% Similarity=0.144 Sum_probs=134.7
Q ss_pred cccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHh--------cCCCcccccccC
Q 046389 4 EEKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLL--------GYSPQVLKLTDY 75 (558)
Q Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll--------~~~~~~~~~~d~ 75 (558)
+|..|+||||.|+..|+ ++++.|+. .+++...+..|+||||+|+..|+.+++++|+ +. +++++.+|.
T Consensus 90 ~~~~g~t~L~~Aa~~~~-~~~~~L~~---~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~-ga~vn~~d~ 164 (373)
T 2fo1_E 90 PEPESPIKLHTEAAGSY-AITEPITR---ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAA-GADVNAMDC 164 (373)
T ss_dssp ----CCCHHHHHHHSSS-CCCSCCST---TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHT-CCCTTCCCT
T ss_pred CCCCCccHHHHHhcCCc-hHHHHhcc---ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhc-CCCCcCCCC
Confidence 44555666666665332 44443322 2344441245666666666666655555544 33 555666666
Q ss_pred CCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcC---c-cccCccchhHHHHHH
Q 046389 76 FGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSIT---E-GQLDNKDLIELLIIL 151 (558)
Q Consensus 76 ~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~---~-~~~~~~~~~t~l~~a 151 (558)
+|.||||+|+..|+.+++++|+++|+++ ...+ ..|.||||+|+..|+.+++++|++++ . .+..+..|.||||.|
T Consensus 165 ~g~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A 242 (373)
T 2fo1_E 165 DENTPLMLAVLARRRRLVAYLMKAGADP-TIYN-KSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIV 242 (373)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCC-TTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHH
T ss_pred CCCCHHHHHHHcChHHHHHHHHHCCCCC-cccC-CCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHH
Confidence 6666666666666666666666666554 2334 55666666666666666666666554 1 334455555555555
Q ss_pred HHhc---cHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHH
Q 046389 152 IKTD---LYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQA 228 (558)
Q Consensus 152 ~~~~---~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~ 228 (558)
+..+ +.++++.|++. +.+++. ..
T Consensus 243 ~~~~~~~~~~~v~~Ll~~-g~~~~~----------------------------------~~------------------- 268 (373)
T 2fo1_E 243 AHNEGRDQVASAKLLVEK-GAKVDY----------------------------------DG------------------- 268 (373)
T ss_dssp HHSCSTTHHHHHHHHHHH-TCCSSC----------------------------------CS-------------------
T ss_pred HHhCCcchHHHHHHHHHC-CCCccc----------------------------------cc-------------------
Confidence 5555 55555555555 222221 10
Q ss_pred HHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhC-CcccccccCCCCcHHHHHHHcCcHHHHHHH
Q 046389 229 ITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREY-PYIISKHDDMGRTMFHIAVLNHQVKILELI 307 (558)
Q Consensus 229 ~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~-~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~L 307 (558)
.......+..|.||||+|+..|+.+++++|++++ +++ +.+|..|+||||+|+.+|+.+++++|
T Consensus 269 ---------------~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~-n~~d~~g~TpL~~A~~~g~~~iv~~L 332 (373)
T 2fo1_E 269 ---------------AARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNK-DKQDEDGKTPIMLAAQEGRIEVVMYL 332 (373)
T ss_dssp ---------------GGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCT-TCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred ---------------ccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCc-cCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 0000112234555555555555555555555554 443 55555555555555555555555555
Q ss_pred HhcCCcccceeeeccCCCCchhhHhhcCCCCCCCccc
Q 046389 308 NEMGSMKDRIVSRRDYGGNNILHMAGMQPSNEGPNVV 344 (558)
Q Consensus 308 l~~ga~~~~~in~~d~~g~TpLh~A~~~~~~~~~~~l 344 (558)
+++|++ ++.+|..|+||||+|+..|+.+++++|
T Consensus 333 l~~gad----~~~~d~~g~t~l~~A~~~g~~~iv~~L 365 (373)
T 2fo1_E 333 IQQGAS----VEAVDATDHTARQLAQANNHHNIVDIF 365 (373)
T ss_dssp HHTTCC----SSCCCSSSCCHHHHHHHTTCHHHHHHH
T ss_pred HHcCCC----ccCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 555555 445555555555555555555555544
No 13
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=2.7e-41 Score=339.81 Aligned_cols=250 Identities=14% Similarity=0.127 Sum_probs=205.2
Q ss_pred CCCCchHHHHHHHCCCHHHHHHHhcCCCccccccc-CCCCcHhHHHHHcCCHHHHHHHH--------HcCcccccccCCC
Q 046389 40 SKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTD-YFGQTALSLAAASGNLDLVQLMT--------EDNEHLALDRESV 110 (558)
Q Consensus 40 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~g~TpLh~A~~~g~~eiv~~Ll--------~~~~~~~~~~~~~ 110 (558)
+..|.||||+|+..|+ +++++|++ .+++.+| ..|.||||+|+..|+.+++++|+ +.|+++ +..+ .
T Consensus 91 ~~~g~t~L~~Aa~~~~-~~~~~L~~---~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~v-n~~d-~ 164 (373)
T 2fo1_E 91 EPESPIKLHTEAAGSY-AITEPITR---ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADV-NAMD-C 164 (373)
T ss_dssp ---CCCHHHHHHHSSS-CCCSCCST---TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCT-TCCC-T
T ss_pred CCCCccHHHHHhcCCc-hHHHHhcc---ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCC-cCCC-C
Confidence 7889999999999665 77777754 4678888 78999999999999998877776 789987 4566 8
Q ss_pred CCccHHHHHHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHHHHHhhCC--cccccccCCCCcHHHHHhc
Q 046389 111 DQYLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVALRLFKDHP--QLATLRDSNEETALHALAG 187 (558)
Q Consensus 111 ~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~--~~~~~~d~~g~t~L~~a~~ 187 (558)
.|.||||+|+..|+.++|++|+++|+ .+..+..|.||||.|+..|+.++++.|++... .+++..|..|.||||+|+.
T Consensus 165 ~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~ 244 (373)
T 2fo1_E 165 DENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAH 244 (373)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHH
T ss_pred CCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHH
Confidence 99999999999999999999999998 67788899999999999999999999998742 5777889999999999998
Q ss_pred CCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChH
Q 046389 188 KSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNI 267 (558)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~ 267 (558)
.+.. ...+++++|++.+.+++....
T Consensus 245 ~~~~-----------------------------------~~~~~v~~Ll~~g~~~~~~~~-------------------- 269 (373)
T 2fo1_E 245 NEGR-----------------------------------DQVASAKLLVEKGAKVDYDGA-------------------- 269 (373)
T ss_dssp SCST-----------------------------------THHHHHHHHHHHTCCSSCCSG--------------------
T ss_pred hCCc-----------------------------------chHHHHHHHHHCCCCcccccc--------------------
Confidence 7742 234677777777666553321
Q ss_pred HHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcC-CcccceeeeccCCCCchhhHhhcCCCCCCCcccc-
Q 046389 268 EFLRVLIREYPYIISKHDDMGRTMFHIAVLNHQVKILELINEMG-SMKDRIVSRRDYGGNNILHMAGMQPSNEGPNVVF- 345 (558)
Q Consensus 268 ~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g-a~~~~~in~~d~~g~TpLh~A~~~~~~~~~~~l~- 345 (558)
...+..|..|+||||+|+.+|+.+++++|+++| ++ +|.+|..|+||||+|+..|+.+++++|.
T Consensus 270 -----------~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~----~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~ 334 (373)
T 2fo1_E 270 -----------ARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN----KDKQDEDGKTPIMLAAQEGRIEVVMYLIQ 334 (373)
T ss_dssp -----------GGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC----TTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred -----------cccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC----ccCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 011457889999999999999999999999886 77 7799999999999999999999888772
Q ss_pred ------------chHHHHHHHHHHHHHHHhhc
Q 046389 346 ------------GAVLQLQQEVLWFKKVSEIV 365 (558)
Q Consensus 346 ------------~~~l~~~~~~~~~~~v~~l~ 365 (558)
..+++.+......+.++.+.
T Consensus 335 ~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll 366 (373)
T 2fo1_E 335 QGASVEAVDATDHTARQLAQANNHHNIVDIFD 366 (373)
T ss_dssp TTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHH
T ss_pred cCCCccCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 24677777766677777665
No 14
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.1e-40 Score=317.29 Aligned_cols=243 Identities=13% Similarity=0.094 Sum_probs=193.5
Q ss_pred CCCCchHHHHHHHCCCHHHHHHHhcCC----------CcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCC
Q 046389 40 SKLGETALHVAASAGRIDFVKNLLGYS----------PQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRES 109 (558)
Q Consensus 40 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~----------~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~ 109 (558)
...|.|+||+|+..|+.+.+..++... ...++.+|.+|.||||+|+..|+.+++++|+++|+++ +..+
T Consensus 12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~~- 89 (285)
T 3d9h_A 12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAV-NIIT- 89 (285)
T ss_dssp ------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCS-CEEC-
T ss_pred chHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcC-
Confidence 568999999999999987777765431 2236778999999999999999999999999999987 4566
Q ss_pred CCCccHHHHHHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcC
Q 046389 110 VDQYLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGK 188 (558)
Q Consensus 110 ~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~ 188 (558)
..|.||||+|+..|+.+++++|+++++ .+..+..|.||||.|+..++.++++.|++. +..++. +.+|.||||+|+..
T Consensus 90 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~-~~~g~t~L~~A~~~ 167 (285)
T 3d9h_A 90 ADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQH-GASVQP-ESDLASPIHEAARR 167 (285)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSSC-SCTTSCHHHHHHHH
T ss_pred CCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHC-CCCCCC-CCCCCCHHHHHHHc
Confidence 799999999999999999999999998 677889999999999999999999999997 444443 45699999999988
Q ss_pred CCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHH
Q 046389 189 SMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIE 268 (558)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~ 268 (558)
|+. +++++|++.+.+++.. +..|.||||+|+..|+.+
T Consensus 168 g~~--------------------------------------~~v~~Ll~~g~~~~~~-----d~~g~t~L~~A~~~~~~~ 204 (285)
T 3d9h_A 168 GHV--------------------------------------ECVNSLIAYGGNIDHK-----ISHLGTPLYLACENQQRA 204 (285)
T ss_dssp TCH--------------------------------------HHHHHHHHTTCCTTCC-----BTTTBCHHHHHHHTTCHH
T ss_pred CCH--------------------------------------HHHHHHHHCCCCCCCc-----CCCCCCHHHHHHHcCcHH
Confidence 875 8999999988776544 478899999999999999
Q ss_pred HHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcCCcccceeeeccCCCCchhhHhhcC
Q 046389 269 FLRVLIREYPYIISKHDDMGRTMFHIAVLNHQVKILELINEMGSMKDRIVSRRDYGGNNILHMAGMQ 335 (558)
Q Consensus 269 iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~~~~~in~~d~~g~TpLh~A~~~ 335 (558)
++++|+++|+++ + .|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..
T Consensus 205 ~v~~Ll~~ga~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad----~~~~d~~g~t~l~~A~~~ 265 (285)
T 3d9h_A 205 CVKKLLESGADV-N-QGKGQDSPLHAVVRTASEELACLLMDFGAD----TQAKNAEGKRPVELVPPE 265 (285)
T ss_dssp HHHHHHHTTCCT-T-CCBTTBCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCGGGGSCTT
T ss_pred HHHHHHHCCCCC-C-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCCcCCCCCCHHHHhcCc
Confidence 999999999998 5 488999999999999999999999999999 779999999999999943
No 15
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.3e-40 Score=334.36 Aligned_cols=255 Identities=16% Similarity=0.074 Sum_probs=222.2
Q ss_pred CCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHH
Q 046389 40 SKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAG 119 (558)
Q Consensus 40 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A 119 (558)
|.+|.||||+||..|+.++|++|++. +.+++.+|..|.||||+|+..|+.+++++|+++|++. .+ ..|.||||+|
T Consensus 17 d~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~-~~g~t~L~~A 91 (364)
T 3ljn_A 17 DDENMEKIHVAARKGQTDEVRRLIET-GVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVH---SL-WHGQKPIHLA 91 (364)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC---CC-BTTBCHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc---cc-cCCCCHHHHH
Confidence 77889999999999999999999998 8889999999999999999999999999999999854 22 5789999999
Q ss_pred HHcCChHHHHHHHhc----Cc-ccc-----------------CccchhHHHHHHHHhc--cHHHHHHHHhhCCccccccc
Q 046389 120 AMSGHKEVVLYLYSI----TE-GQL-----------------DNKDLIELLIILIKTD--LYEVALRLFKDHPQLATLRD 175 (558)
Q Consensus 120 ~~~g~~~~v~~Ll~~----~~-~~~-----------------~~~~~~t~l~~a~~~~--~~~~~~~Ll~~~~~~~~~~d 175 (558)
+..|+.+++++|++. +. .+. .+..|.||||.|+..| +.++++.|++. +.+++.+|
T Consensus 92 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~-ga~~~~~d 170 (364)
T 3ljn_A 92 VMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQL-GASPTAKD 170 (364)
T ss_dssp HHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHH-TCCTTCCC
T ss_pred HHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHc-CCCCcccC
Confidence 999999999999988 43 222 5667899999999999 99999999998 77888999
Q ss_pred CCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCc
Q 046389 176 SNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPF 255 (558)
Q Consensus 176 ~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~ 255 (558)
..|.||||+|+..|+. +++++|++.+.+....+.+..+..|.
T Consensus 171 ~~g~t~L~~A~~~g~~--------------------------------------~~v~~Ll~~g~~~~~~~~~~~~~~g~ 212 (364)
T 3ljn_A 171 KADETPLMRAMEFRNR--------------------------------------EALDLMMDTVPSKSSLRLDYANKQGN 212 (364)
T ss_dssp TTSCCHHHHHHHTTCH--------------------------------------HHHHHHHHHCSCSSSCCTTCCCTTCC
T ss_pred CCCCCHHHHHHHcCCH--------------------------------------HHHHHHHhcccccccccccccCCCCC
Confidence 9999999999998876 89999999998855555566678999
Q ss_pred hHHHHHHhcChHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcCCcccc--------eeeeccCCCCc
Q 046389 256 QLTFVAAEKGNIEFLRVLIREYPYIISKHDDMGRTMFHIAVLNHQVKILELINEMGSMKDR--------IVSRRDYGGNN 327 (558)
Q Consensus 256 tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~~~~--------~in~~d~~g~T 327 (558)
||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.+++++|+++|++.+. .....+..|.|
T Consensus 213 t~L~~A~~~g~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (364)
T 3ljn_A 213 SHLHWAILINWEDVAMRFVEMGIDV-NMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWL 291 (364)
T ss_dssp CTTHHHHTTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCC
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccc
Confidence 9999999999999999999999998 99999999999999999999999999999987421 11237888999
Q ss_pred hhhHhhcCCCCC
Q 046389 328 ILHMAGMQPSNE 339 (558)
Q Consensus 328 pLh~A~~~~~~~ 339 (558)
|++.|+..++.+
T Consensus 292 ~l~~aa~~~~~~ 303 (364)
T 3ljn_A 292 DFVPAAADPSKQ 303 (364)
T ss_dssp TTSCSSCCHHHH
T ss_pred cchhhhhccCHH
Confidence 999999988644
No 16
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=7.3e-40 Score=311.28 Aligned_cols=227 Identities=16% Similarity=0.085 Sum_probs=152.2
Q ss_pred hhhhhcCCCCchHHHHHHHCC-------------CHHHHHHHhcCCCccc-ccccCCCCcHhHHHHHcCCHHHHHHHHHc
Q 046389 34 YVKASLSKLGETALHVAASAG-------------RIDFVKNLLGYSPQVL-KLTDYFGQTALSLAAASGNLDLVQLMTED 99 (558)
Q Consensus 34 ~~~~~~~~~g~t~Lh~Aa~~g-------------~~~~v~~Ll~~~~~~~-~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~ 99 (558)
+++.+ |.+|.||||+|+..| +.+++++|++. +.++ +..|..|.||||+|+..|+.+++++|+++
T Consensus 2 dvn~~-d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~-g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ 79 (253)
T 1yyh_A 2 DVNVR-GPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQ-GASLHNQTDRTGETALHLAARYSRSDAAKRLLEA 79 (253)
T ss_dssp ----------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCCC-CCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHc-cCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 35555 788899999998877 78888888887 4544 44577888888888888888888888888
Q ss_pred CcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCC
Q 046389 100 NEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEE 179 (558)
Q Consensus 100 ~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~ 179 (558)
|+++ ...+ ..|.||||+|+..|+.+++++|++.++ .+++.++..|.
T Consensus 80 g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~~~--------------------------------~~~~~~~~~g~ 125 (253)
T 1yyh_A 80 SADA-NIQD-NMGRTPLHAAVSADAQGVFQILIRNRA--------------------------------TDLDARMHDGT 125 (253)
T ss_dssp TCCT-TCCC-TTSCCHHHHHHHHTCHHHHHHHHHSTT--------------------------------SCTTCCCTTCC
T ss_pred CCCC-CCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCC--------------------------------CCccccCCCCC
Confidence 8776 3455 678888888888888888877777653 34455677777
Q ss_pred cHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHH
Q 046389 180 TALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTF 259 (558)
Q Consensus 180 t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh 259 (558)
||||+|+..++. +++++|++.+.+++.. +..|.||||
T Consensus 126 t~L~~A~~~~~~--------------------------------------~~v~~Ll~~g~~~~~~-----d~~g~t~L~ 162 (253)
T 1yyh_A 126 TPLILAARLAVE--------------------------------------GMLEDLINSHADVNAV-----DDLGKSALH 162 (253)
T ss_dssp CHHHHHHHHTCS--------------------------------------SHHHHHHHTTCCTTCB-----CTTSCBHHH
T ss_pred cHHHHHHHcChH--------------------------------------HHHHHHHHcCCCCCCc-----CCCCCCHHH
Confidence 777777776655 6677777776665543 367789999
Q ss_pred HHHhcChHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcCCcccceeeeccCCCCchhhHhhcCCCCC
Q 046389 260 VAAEKGNIEFLRVLIREYPYIISKHDDMGRTMFHIAVLNHQVKILELINEMGSMKDRIVSRRDYGGNNILHMAGMQPSNE 339 (558)
Q Consensus 260 ~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~~~~~in~~d~~g~TpLh~A~~~~~~~ 339 (558)
+|+..|+.+++++|+++|+++ +.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|..|+||||+|++.|+.+
T Consensus 163 ~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~----~~~~d~~g~tpl~~A~~~g~~~ 237 (253)
T 1yyh_A 163 WAAAVNNVDAAVVLLKNGANK-DMQNNREETPLFLAAREGSYETAKVLLDHFAN----RDITDHMDRLPRDIAQERMHHD 237 (253)
T ss_dssp HHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC----ccccccCCCCHHHHHHHcCCHH
Confidence 999999999999999999988 88899999999999999999999999999988 6688999999999999999877
Q ss_pred CCccc
Q 046389 340 GPNVV 344 (558)
Q Consensus 340 ~~~~l 344 (558)
++++|
T Consensus 238 i~~~l 242 (253)
T 1yyh_A 238 IVRLL 242 (253)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66655
No 17
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=6.6e-39 Score=304.68 Aligned_cols=231 Identities=20% Similarity=0.185 Sum_probs=168.4
Q ss_pred cccccCCcHHHHHHHHcC-------------CHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCc
Q 046389 2 TCEEKSTLSKLYRAALDD-------------DWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQ 68 (558)
Q Consensus 2 ~~~d~~g~t~L~~A~~~g-------------~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~ 68 (558)
+.+|.+|+||||+|+..| +.++++.|++. +.+++...|..|.||||+|+..|+.++|++|++. ++
T Consensus 4 n~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~-g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~ 81 (253)
T 1yyh_A 4 NVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQ-GASLHNQTDRTGETALHLAARYSRSDAAKRLLEA-SA 81 (253)
T ss_dssp -------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHT-TC
T ss_pred CCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHc-cCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CC
Confidence 457899999999999987 89999988877 5555554488999999999999999999999998 89
Q ss_pred ccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCccccCccchhHHH
Q 046389 69 VLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITEGQLDNKDLIELL 148 (558)
Q Consensus 69 ~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l 148 (558)
+++.+|..|.||||+|+..|+.+++++|+++++......+ ..|.||||+|+..|+.+++++|++.++
T Consensus 82 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~------------ 148 (253)
T 1yyh_A 82 DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARM-HDGTTPLILAARLAVEGMLEDLINSHA------------ 148 (253)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCC-TTCCCHHHHHHHHTCSSHHHHHHHTTC------------
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccC-CCCCcHHHHHHHcChHHHHHHHHHcCC------------
Confidence 9999999999999999999999999999999984345666 899999999999999999999988775
Q ss_pred HHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHH
Q 046389 149 IILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQA 228 (558)
Q Consensus 149 ~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~ 228 (558)
+++.+|..|.||||+|+..|+.
T Consensus 149 ---------------------~~~~~d~~g~t~L~~A~~~~~~------------------------------------- 170 (253)
T 1yyh_A 149 ---------------------DVNAVDDLGKSALHWAAAVNNV------------------------------------- 170 (253)
T ss_dssp ---------------------CTTCBCTTSCBHHHHHHHHTCH-------------------------------------
T ss_pred ---------------------CCCCcCCCCCCHHHHHHHcCCH-------------------------------------
Confidence 3345566677777777766554
Q ss_pred HHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHH
Q 046389 229 ITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYIISKHDDMGRTMFHIAVLNHQVKILELIN 308 (558)
Q Consensus 229 ~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll 308 (558)
+++++|++.|++++.. +..|.||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+++|+.+++++|.
T Consensus 171 -~~v~~Ll~~ga~~~~~-----~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~g~~~i~~~l~ 243 (253)
T 1yyh_A 171 -DAAVVLLKNGANKDMQ-----NNREETPLFLAAREGSYETAKVLLDHFANR-DITDHMDRLPRDIAQERMHHDIVRLLD 243 (253)
T ss_dssp -HHHHHHHHTTCCTTCC-----CTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred -HHHHHHHHcCCCCCCc-----CCCCCCHHHHHHHCCCHHHHHHHHHcCCCc-cccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 6677777776665543 367899999999999999999999999998 899999999999999999999999998
Q ss_pred hcCC
Q 046389 309 EMGS 312 (558)
Q Consensus 309 ~~ga 312 (558)
+...
T Consensus 244 ~~~~ 247 (253)
T 1yyh_A 244 LEHH 247 (253)
T ss_dssp C---
T ss_pred HHhh
Confidence 7643
No 18
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=8.2e-39 Score=301.71 Aligned_cols=227 Identities=15% Similarity=0.155 Sum_probs=156.1
Q ss_pred CCCCchHHHHHHHCCCHHHHHHHhc---CCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHH
Q 046389 40 SKLGETALHVAASAGRIDFVKNLLG---YSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPI 116 (558)
Q Consensus 40 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~---~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpL 116 (558)
|.+|+||||+|+..|+.+++++|++ ..+.+++.+|..|.||||+|+..|+.+++++|+++|+++ ...+ ..|.|||
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~l 83 (241)
T 1k1a_A 6 DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALD-RHGQTAA 83 (241)
T ss_dssp -CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTSCCHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccC-CCCCCHH
Confidence 5566666666666666666666665 125566666666666666666666666666666666654 2334 5666666
Q ss_pred HHHHHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhh
Q 046389 117 HAGAMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLA 196 (558)
Q Consensus 117 h~A~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~ 196 (558)
|+|+..|+.+++++|++.++. ...+.+..+..|.||||+|+..++.
T Consensus 84 ~~A~~~~~~~~~~~Ll~~~~~-----------------------------~~~~~~~~~~~g~t~L~~A~~~~~~----- 129 (241)
T 1k1a_A 84 HLACEHRSPTCLRALLDSAAP-----------------------------GTLDLEARNYDGLTALHVAVNTECQ----- 129 (241)
T ss_dssp HHHHHTTCHHHHHHHHHHSCT-----------------------------TSCCTTCCCTTSCCHHHHHHHHTCH-----
T ss_pred HHHHHcCCHHHHHHHHHcCCC-----------------------------ccccccccCcCCCcHHHHHHHcCCH-----
Confidence 666666666666666655530 0112233444455555555544432
Q ss_pred hhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHh
Q 046389 197 NQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIRE 276 (558)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~ 276 (558)
+++++|++.+.+.+..+. ..|.||||+|+..|+.+++++|+++
T Consensus 130 ---------------------------------~~~~~Ll~~g~~~~~~~~----~~g~t~L~~A~~~~~~~~v~~Ll~~ 172 (241)
T 1k1a_A 130 ---------------------------------ETVQLLLERGADIDAVDI----KSGRSPLIHAVENNSLSMVQLLLQH 172 (241)
T ss_dssp ---------------------------------HHHHHHHHTTCCTTCCCT----TTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred ---------------------------------HHHHHHHHcCCCcccccc----cCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 444555554444333221 4578999999999999999999999
Q ss_pred CCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcCCcccceeeeccCCCCchhhHhhcCCCCCCCccc
Q 046389 277 YPYIISKHDDMGRTMFHIAVLNHQVKILELINEMGSMKDRIVSRRDYGGNNILHMAGMQPSNEGPNVV 344 (558)
Q Consensus 277 ~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~~~~~in~~d~~g~TpLh~A~~~~~~~~~~~l 344 (558)
|+++ +.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|..|+||||+|+..++.++++.|
T Consensus 173 g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~tpl~~A~~~~~~~i~~~l 235 (241)
T 1k1a_A 173 GANV-NAQMYSGSSALHSASGRGLLPLVRTLVRSGAD----SSLKNCHNDTPLMVARSRRVIDILRGK 235 (241)
T ss_dssp TCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTSCCTTTTCSSHHHHHHHTC-
T ss_pred CCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCC----CCCcCCCCCCHHHHHHhcCcHHHHhhh
Confidence 9998 89999999999999999999999999999999 678999999999999999887766665
No 19
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.8e-39 Score=324.58 Aligned_cols=263 Identities=14% Similarity=0.092 Sum_probs=229.5
Q ss_pred cccccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHh
Q 046389 2 TCEEKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTAL 81 (558)
Q Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpL 81 (558)
+..|.+|+||||+|+..|+.++++.|++. +.+++.. |..|.||||+|+..|+.++|++|++. ++++ .+.+|.|||
T Consensus 14 ~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~--~~~~g~t~L 88 (364)
T 3ljn_A 14 IKSDDENMEKIHVAARKGQTDEVRRLIET-GVSPTIQ-NRFGCTALHLACKFGCVDTAKYLASV-GEVH--SLWHGQKPI 88 (364)
T ss_dssp --CCHHHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCC-CTTCCCHHHHHHHHCCHHHHHHHHHH-CCCC--CCBTTBCHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCcccc-CCCCCcHHHHHHHcCCHHHHHHHHHC-CCCc--cccCCCCHH
Confidence 35688999999999999999999988876 6778877 89999999999999999999999998 5543 345799999
Q ss_pred HHHHHcCCHHHHHHHHHc----Cccccc----------------ccCCCCCccHHHHHHHcC--ChHHHHHHHhcCc-cc
Q 046389 82 SLAAASGNLDLVQLMTED----NEHLAL----------------DRESVDQYLPIHAGAMSG--HKEVVLYLYSITE-GQ 138 (558)
Q Consensus 82 h~A~~~g~~eiv~~Ll~~----~~~~~~----------------~~~~~~g~tpLh~A~~~g--~~~~v~~Ll~~~~-~~ 138 (558)
|+|+..|+.+++++|+++ |.+++. ..+ ..|.||||+|+..| +.+++++|++.++ .+
T Consensus 89 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~ 167 (364)
T 3ljn_A 89 HLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKH-CKGQTALHWCVGLGPEYLEMIKILVQLGASPT 167 (364)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEE-ESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTT
T ss_pred HHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCC-CCCCCHHHHHHHcCCchHHHHHHHHHcCCCCc
Confidence 999999999999999999 665432 145 78999999999999 9999999999998 67
Q ss_pred cCccchhHHHHHHHHhccHHHHHHHHhhCCc----ccccccCCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccc
Q 046389 139 LDNKDLIELLIILIKTDLYEVALRLFKDHPQ----LATLRDSNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVG 214 (558)
Q Consensus 139 ~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~----~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (558)
..+..|.||||.|+..|+.++++.|++.+.. +++..|..|.||||+|+..|+.
T Consensus 168 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~----------------------- 224 (364)
T 3ljn_A 168 AKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWE----------------------- 224 (364)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCH-----------------------
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCH-----------------------
Confidence 7889999999999999999999999997333 2788999999999999998876
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCccc-----------cc
Q 046389 215 STKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYII-----------SK 283 (558)
Q Consensus 215 ~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~-----------~~ 283 (558)
+++++|++.|++++.. +..|.||||+|+..|+.+++++|++++++.. ..
T Consensus 225 ---------------~~v~~Ll~~gad~~~~-----d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 284 (364)
T 3ljn_A 225 ---------------DVAMRFVEMGIDVNME-----DNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVL 284 (364)
T ss_dssp ---------------HHHHHHHTTTCCTTCC-----CTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBC
T ss_pred ---------------HHHHHHHHcCCCCCCC-----CCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCccccc
Confidence 8999999998887644 4789999999999999999999999987741 12
Q ss_pred ccCCCCcHHHHHHHcCcHHHHHHHHhcCCc
Q 046389 284 HDDMGRTMFHIAVLNHQVKILELINEMGSM 313 (558)
Q Consensus 284 ~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~ 313 (558)
.+..++||+++|+..++.+.+..|+..+++
T Consensus 285 ~~~~~~~~l~~aa~~~~~~~v~~ll~~~~~ 314 (364)
T 3ljn_A 285 PDRVVWLDFVPAAADPSKQEVLQLLQEKLD 314 (364)
T ss_dssp GGGCCCCTTSCSSCCHHHHHHHHHHHHHHH
T ss_pred ccccccccchhhhhccCHHHHHHHHHHHHH
Confidence 567899999999999988888888887766
No 20
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=3.4e-38 Score=296.76 Aligned_cols=216 Identities=19% Similarity=0.181 Sum_probs=154.6
Q ss_pred CCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHH
Q 046389 40 SKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAG 119 (558)
Q Consensus 40 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A 119 (558)
|.+|.||||+|+..|+.+++++|++. +.+++.+|..|.||||+|+..|+.+++++|+++|+++ ...+ ..|.||||+|
T Consensus 8 ~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A 84 (237)
T 3b7b_A 8 HQNKRSPLHAAAEAGHVDICHMLVQA-GANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKD-AEGSTCLHLA 84 (237)
T ss_dssp SCCSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCC-TTSCCHHHHH
T ss_pred cCCCCCHHHHHHHcCcHHHHHHHHHc-CCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCC-CCCCcHHHHH
Confidence 55666666666666666666666666 6666666666666666666666666666666666654 3344 5666666666
Q ss_pred HHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhc
Q 046389 120 AMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQN 199 (558)
Q Consensus 120 ~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~ 199 (558)
+..|+.+++++|++.+. ..++..+..|.||||+|+..++.
T Consensus 85 ~~~~~~~~~~~Ll~~~~--------------------------------~~~~~~~~~g~t~L~~A~~~~~~-------- 124 (237)
T 3b7b_A 85 AKKGHYEVVQYLLSNGQ--------------------------------MDVNCQDDGGWTPMIWATEYKHV-------- 124 (237)
T ss_dssp HHTTCHHHHHHHHTTTC--------------------------------CCTTCCCTTSCCHHHHHHHTTCH--------
T ss_pred HHcCCHHHHHHHHhCCC--------------------------------CCcccCCCCCCCHHHHHHHcCCH--------
Confidence 66666666666655542 22333444555555555554443
Q ss_pred ccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCc
Q 046389 200 QQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPY 279 (558)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~ 279 (558)
+++++|++.+.+++. .+..|.||||+|+..|+.+++++|+++|++
T Consensus 125 ------------------------------~~~~~Ll~~g~~~~~-----~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 169 (237)
T 3b7b_A 125 ------------------------------DLVKLLLSKGSDINI-----RDNEENICLHWAAFSGCVDIAEILLAAKCD 169 (237)
T ss_dssp ------------------------------HHHHHHHHTTCCTTC-----CCTTSCCHHHHHHHHCCHHHHHHHHTTTCC
T ss_pred ------------------------------HHHHHHHHCCCCCCc-----cCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 455555554444332 235678999999999999999999999999
Q ss_pred ccccccCCCCcHHHHHHHcCcHHHHHHHHhcCCcccceeeeccCCCCchhhHhhcCCCC
Q 046389 280 IISKHDDMGRTMFHIAVLNHQVKILELINEMGSMKDRIVSRRDYGGNNILHMAGMQPSN 338 (558)
Q Consensus 280 ~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~~~~~in~~d~~g~TpLh~A~~~~~~ 338 (558)
+ +.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|++|+||||+|+..++.
T Consensus 170 ~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad----~~~~d~~g~t~l~~A~~~~~~ 223 (237)
T 3b7b_A 170 L-HAVNIHGDSPLHIAARENRYDCVVLFLSRDSD----VTLKNKEGETPLQCASLNSQV 223 (237)
T ss_dssp T-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC----TTCCCTTSCCHHHHSCTTCHH
T ss_pred C-CCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCC----CCccCCCCCCHHHHHHHHHHH
Confidence 8 89999999999999999999999999999999 678999999999999999874
No 21
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=303.77 Aligned_cols=181 Identities=15% Similarity=0.091 Sum_probs=161.8
Q ss_pred cccccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHh
Q 046389 2 TCEEKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTAL 81 (558)
Q Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpL 81 (558)
+.+|.+|+||||+|+..|+.++++.|++. +.+++.. |..|.||||+|+..|+.+++++|++. +++++. +.+|.|||
T Consensus 30 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~-~~~g~t~L 105 (261)
T 2xai_A 30 NIITADHVSPLHEACLGGHLSCVKILLKH-GAQVNGV-TADWHTPLFNACVSGSWDCVNLLLQH-GASVQP-ESDLASPI 105 (261)
T ss_dssp SCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSSC-SCTTCCHH
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCC-CCCCCCHH
Confidence 35688999999999999999999988876 7788877 89999999999999999999999998 787775 45699999
Q ss_pred HHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHH
Q 046389 82 SLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVAL 161 (558)
Q Consensus 82 h~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~ 161 (558)
|+|+..|+.+++++|+++|+++ ...+ ..|.||||+|+..|+.+++++|++.++....+..|.||||.|+..++.++++
T Consensus 106 ~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~Lh~A~~~~~~~~v~ 183 (261)
T 2xai_A 106 HEAARRGHVECVNSLIAYGGNI-DHKI-SHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVARTASEELAC 183 (261)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCT-TCCB-TTTBCHHHHHHHTTCHHHHHHHHHHTCCTTCCBTTBCHHHHHHHHTCHHHHH
T ss_pred HHHHHcCcHHHHHHHHHcCCCC-CcCC-CCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHcCCHHHHH
Confidence 9999999999999999999997 4566 7999999999999999999999999984335788899999999999999999
Q ss_pred HHHhhCCcccccccCCCCcHHHHHhcCC
Q 046389 162 RLFKDHPQLATLRDSNEETALHALAGKS 189 (558)
Q Consensus 162 ~Ll~~~~~~~~~~d~~g~t~L~~a~~~~ 189 (558)
.|++. +.+++.+|.+|+||+|+|+..+
T Consensus 184 ~Ll~~-gad~~~~d~~g~tpl~~A~~~~ 210 (261)
T 2xai_A 184 LLMDF-GADTQAKNAEGKRPVELVPPES 210 (261)
T ss_dssp HHHHT-TCCTTCCCTTSCCGGGGSCTTC
T ss_pred HHHHc-CCCCCCcCCCCCChhhhccccc
Confidence 99987 7788889999999999888554
No 22
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.6e-38 Score=299.69 Aligned_cols=230 Identities=16% Similarity=0.145 Sum_probs=191.5
Q ss_pred cccccCCcHHHHHHHHcCCHHHHHHHHh---hCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCC
Q 046389 2 TCEEKSTLSKLYRAALDDDWQTAETIFE---SHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQ 78 (558)
Q Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~ll~---~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~ 78 (558)
+.+|.+|+||||+|+..|+.+++++|++ +.+.+++.. |..|.||||+|+..|+.+++++|++. +.+++.+|..|.
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~ 80 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIY-NNLRQTPLHLAVITTLPSVVRLLVTA-GASPMALDRHGQ 80 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSC
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcc-cccCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCC
Confidence 4679999999999999999999999987 467778777 88999999999999999999999998 899999999999
Q ss_pred cHhHHHHHcCCHHHHHHHHHcCc----ccccccCCCCCccHHHHHHHcCChHHHHHHHhcCccccCccchhHHHHHHHHh
Q 046389 79 TALSLAAASGNLDLVQLMTEDNE----HLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKT 154 (558)
Q Consensus 79 TpLh~A~~~g~~eiv~~Ll~~~~----~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~ 154 (558)
||||+|+..|+.+++++|+++++ ++ ...+ ..|.||||+|+..|+.+++++|++.++
T Consensus 81 t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~------------------ 140 (241)
T 1k1a_A 81 TAAHLACEHRSPTCLRALLDSAAPGTLDL-EARN-YDGLTALHVAVNTECQETVQLLLERGA------------------ 140 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHSCTTSCCT-TCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTC------------------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccc-cccC-cCCCcHHHHHHHcCCHHHHHHHHHcCC------------------
Confidence 99999999999999999999987 43 4455 799999999999999999999998875
Q ss_pred ccHHHHHHHHhhCCccccccc-CCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHH
Q 046389 155 DLYEVALRLFKDHPQLATLRD-SNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVE 233 (558)
Q Consensus 155 ~~~~~~~~Ll~~~~~~~~~~d-~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~ 233 (558)
+++..+ ..|.||||+|+..|+. ++++
T Consensus 141 ---------------~~~~~~~~~g~t~L~~A~~~~~~--------------------------------------~~v~ 167 (241)
T 1k1a_A 141 ---------------DIDAVDIKSGRSPLIHAVENNSL--------------------------------------SMVQ 167 (241)
T ss_dssp ---------------CTTCCCTTTCCCHHHHHHHTTCH--------------------------------------HHHH
T ss_pred ---------------CcccccccCCCcHHHHHHHcCCH--------------------------------------HHHH
Confidence 222334 5667777777766654 6667
Q ss_pred HHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcCC
Q 046389 234 IIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYIISKHDDMGRTMFHIAVLNHQVKILELINEMGS 312 (558)
Q Consensus 234 ~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga 312 (558)
+|++.+.+++.. +..|.||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+.+|+.++++.|.+.++
T Consensus 168 ~Ll~~g~~~~~~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 168 LLLQHGANVNAQ-----MYSGSSALHSASGRGLLPLVRTLVRSGADS-SLKNCHNDTPLMVARSRRVIDILRGKATRPA 240 (241)
T ss_dssp HHHHTTCCTTCB-----CTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCTTTTCSSHHHHHHHTC------
T ss_pred HHHHcCCCCCCc-----CCCCCCHHHHHHHcCCHHHHHHHHhcCCCC-CCcCCCCCCHHHHHHhcCcHHHHhhhccCCC
Confidence 777766655433 367899999999999999999999999998 9999999999999999999999999988764
No 23
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=4.3e-38 Score=294.81 Aligned_cols=228 Identities=18% Similarity=0.174 Sum_probs=174.6
Q ss_pred ccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHH
Q 046389 5 EKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLA 84 (558)
Q Consensus 5 d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A 84 (558)
+..+.+|||.|+..|+.+.+++++...+..++.. +..|.||||+|+..|+.+++++|++. +.+++.+|..|.||||+|
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A 80 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADKSLATRT-DQDSRTALHWACSAGHTEIVEFLLQL-GVPVNDKDDAGWSPLHIA 80 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCC-CTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhchhhhhcC-CCCCCCHHHHHHHcCcHHHHHHHHHh-CCCCCCcCCCCCCHHHHH
Confidence 4567889999999999999999998877776666 88999999999999999999999998 888999999999999999
Q ss_pred HHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHH
Q 046389 85 AASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLF 164 (558)
Q Consensus 85 ~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll 164 (558)
+..|+.+++++|+++|+++ ...+ ..|.||||+|+..|+.+++++|+++++
T Consensus 81 ~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~---------------------------- 130 (231)
T 3aji_A 81 ASAGXDEIVKALLVKGAHV-NAVN-QNGCTPLHYAASKNRHEIAVMLLEGGA---------------------------- 130 (231)
T ss_dssp HHHTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTC----------------------------
T ss_pred HHcCHHHHHHHHHHcCCCC-CCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCC----------------------------
Confidence 9999999999999999886 4556 789999999999999999998887765
Q ss_pred hhCCcccccccCCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccch
Q 046389 165 KDHPQLATLRDSNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQD 244 (558)
Q Consensus 165 ~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~ 244 (558)
+++.++..|.||||+|+..|+. +++++|++.+.+++.
T Consensus 131 -----~~~~~~~~g~t~L~~A~~~~~~--------------------------------------~~v~~Ll~~g~~~~~ 167 (231)
T 3aji_A 131 -----NPDAKDHYDATAMHRAAAKGNL--------------------------------------KMVHILLFYKASTNI 167 (231)
T ss_dssp -----CTTCCCTTSCCHHHHHHHHTCH--------------------------------------HHHHHHHHTTCCSCC
T ss_pred -----CCCCcCCCCCcHHHHHHHcCCH--------------------------------------HHHHHHHhcCCCccc
Confidence 2233445555555555544433 445555554444333
Q ss_pred hhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcCCc
Q 046389 245 SEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYIISKHDDMGRTMFHIAVLNHQVKILELINEMGSM 313 (558)
Q Consensus 245 ~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~ 313 (558)
. +..|.||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+..++.+++++|.++|++
T Consensus 168 ~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 168 Q-----DTEGNTPLHLACDEERVEEAKFLVTQGASI-YIENKEEKTPLQVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp C-----CTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred c-----CCCCCCHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence 2 245667777777777777777777777776 67777777777777777777777777776654
No 24
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.5e-38 Score=310.18 Aligned_cols=263 Identities=19% Similarity=0.143 Sum_probs=214.2
Q ss_pred HHHHcCCHHHHHHHHhhCchhh-------hhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHH
Q 046389 14 RAALDDDWQTAETIFESHEDYV-------KASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAA 86 (558)
Q Consensus 14 ~A~~~g~~~~v~~ll~~~~~~~-------~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~ 86 (558)
.++..|+.+.++.++....... ....+..|.||||.||..|+.++|++|++. +.+++.+|..|.||||+|+.
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~ 82 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLER-GADINYANVDGLTALHQACI 82 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHH-CCCTTCBCTTCCBHHHHHHH
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHH
Confidence 4677888888888887643211 111245688999999999999999999998 88999999999999999999
Q ss_pred cCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHHHHHh
Q 046389 87 SGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVALRLFK 165 (558)
Q Consensus 87 ~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~ 165 (558)
.|+.+++++|+++|+++ +..+ ..|.||||+|+..|+.+++++|+++++ .+..+..|.||||.|+..++.++++.++.
T Consensus 83 ~g~~~~v~~Ll~~ga~~-~~~~-~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~ 160 (299)
T 1s70_B 83 DDNVDMVKFLVENGANI-NQPD-NEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVN 160 (299)
T ss_dssp TTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCC-CCCC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHh
Confidence 99999999999999987 4566 799999999999999999999999988 56677888899999998888888888887
Q ss_pred hCCcccccccCCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchh
Q 046389 166 DHPQLATLRDSNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDS 245 (558)
Q Consensus 166 ~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~ 245 (558)
..+...+..+..+.++++ ..+..++..+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~l~~~~~~~-- 192 (299)
T 1s70_B 161 RQGVDIEAARKEEERIML----------------------------------------------RDARQWLNSGHIND-- 192 (299)
T ss_dssp HHTCCHHHHHHHHHHHHH----------------------------------------------HHHHHHHHHTCCCC--
T ss_pred hcCCCchhhhhhhhhHHH----------------------------------------------HHHHHHHhccCcch--
Confidence 755444332222222221 22333344333222
Q ss_pred hhhhhccCCchHHHHHHhcChHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcCCcccceeeeccCCC
Q 046389 246 EISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYIISKHDDMGRTMFHIAVLNHQVKILELINEMGSMKDRIVSRRDYGG 325 (558)
Q Consensus 246 ~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~~~~~in~~d~~g 325 (558)
...+..|.||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|..|
T Consensus 193 --~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad----~~~~d~~g 265 (299)
T 1s70_B 193 --VRHAKSGGTALHVAAAKGYTEVLKLLIQARYDV-NIKDYDGWTPLHAAAHWGKEEACRILVENLCD----MEAVNKVG 265 (299)
T ss_dssp --CCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTS
T ss_pred --hhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCC----CCCcCCCC
Confidence 123467899999999999999999999999998 99999999999999999999999999999999 77999999
Q ss_pred CchhhHhhc
Q 046389 326 NNILHMAGM 334 (558)
Q Consensus 326 ~TpLh~A~~ 334 (558)
+||||+|+.
T Consensus 266 ~t~l~~A~~ 274 (299)
T 1s70_B 266 QTAFDVADE 274 (299)
T ss_dssp CCTTTSCCS
T ss_pred CCHHHHHHH
Confidence 999999965
No 25
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.5e-37 Score=288.93 Aligned_cols=80 Identities=16% Similarity=0.091 Sum_probs=73.1
Q ss_pred cCCchHHHHHHhcChHHHHHHHHHhC-CcccccccCCCCcHHHHHHHcCcHHHHHHHH-hcCCcccceeeeccCCCCchh
Q 046389 252 ERPFQLTFVAAEKGNIEFLRVLIREY-PYIISKHDDMGRTMFHIAVLNHQVKILELIN-EMGSMKDRIVSRRDYGGNNIL 329 (558)
Q Consensus 252 ~~g~tpLh~Aa~~g~~~iv~~Ll~~~-~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll-~~ga~~~~~in~~d~~g~TpL 329 (558)
..|.||||+|+..|+.+++++|+++| +++ +.+|..|+||||+|+..|+.+++++|+ ++|++ ++.+|.+|+|||
T Consensus 138 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~----~~~~~~~g~t~l 212 (228)
T 2dzn_A 138 KFNQIPLHRAASVGSLKLIELLCGLGKSAV-NWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE----YDLVDNKGAKAE 212 (228)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHTTTCCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCC----SCCBCTTSCBGG
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcCcccc-cCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC----CCccCCCCCcHH
Confidence 56788888999999999999999999 666 999999999999999999999999999 89999 779999999999
Q ss_pred hHhhcCC
Q 046389 330 HMAGMQP 336 (558)
Q Consensus 330 h~A~~~~ 336 (558)
|+|+..+
T Consensus 213 ~~A~~~~ 219 (228)
T 2dzn_A 213 DVALNEQ 219 (228)
T ss_dssp GGCSSTT
T ss_pred HHHHHHH
Confidence 9997653
No 26
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=303.17 Aligned_cols=219 Identities=23% Similarity=0.279 Sum_probs=133.7
Q ss_pred CcccccCCcHHHHHHHHcCCHHHHHHHHhhCchh-------hhhhcCCCCchHHHHHHHCCCHH-HHHHHhcCCCccccc
Q 046389 1 ETCEEKSTLSKLYRAALDDDWQTAETIFESHEDY-------VKASLSKLGETALHVAASAGRID-FVKNLLGYSPQVLKL 72 (558)
Q Consensus 1 ~~~~d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~-------~~~~~~~~g~t~Lh~Aa~~g~~~-~v~~Ll~~~~~~~~~ 72 (558)
|..+|.++.++|+.|+..|+.++|+.||+..... ++.. +..|.||||.|+..++.+ ++++|++. |+++|.
T Consensus 4 e~kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~-~~~~~t~L~~a~~~~~~~~~v~~Ll~~-Gadvn~ 81 (269)
T 4b93_B 4 ETKKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAA-DPEFCHPLCQCPKCAPAQKRLAKVPAS-GLGVNV 81 (269)
T ss_dssp ---CCCHHHHHHHHHHHTTCHHHHHHHHTCC-----------------------------------------C-CCCTTC
T ss_pred ccccCccchhHHHHHHHcCCHHHHHHHHHCCCccccccccccccc-CccCCCHHHHHHHhCCHHHHHHHHHHC-CCCCCC
Confidence 3457788889999999999999999888764332 2333 677889999998887754 77888887 888999
Q ss_pred ccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCccccCccchhHHHHHHH
Q 046389 73 TDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITEGQLDNKDLIELLIILI 152 (558)
Q Consensus 73 ~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~ 152 (558)
+|.+|.||||+|+..|+.+++++|++.|+++ ...+ ..|.||+|.|+..++.+++++|++.++
T Consensus 82 ~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~-~~~~-~~g~t~l~~a~~~~~~~~~~~Ll~~g~---------------- 143 (269)
T 4b93_B 82 TSQDGSSPLHVAALHGRADLIPLLLKHGANA-GARN-ADQAVPLHLACQQGHFQVVKCLLDSNA---------------- 143 (269)
T ss_dssp CCTTSCCHHHHHHHTTCTTHHHHHHHTTCCT-TCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTC----------------
T ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHhcCCCc-CccC-CCCCCccccccccChHHHHHHHHHCCC----------------
Confidence 9999999999999999999999999999886 4555 788999999999888888888877654
Q ss_pred HhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHH
Q 046389 153 KTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLV 232 (558)
Q Consensus 153 ~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v 232 (558)
+++.+|..|+||
T Consensus 144 -----------------~~n~~d~~g~Tp--------------------------------------------------- 155 (269)
T 4b93_B 144 -----------------KPNKKDLSGNTP--------------------------------------------------- 155 (269)
T ss_dssp -----------------CSCCCCTTCCCH---------------------------------------------------
T ss_pred -----------------CCCCCCCCCCCH---------------------------------------------------
Confidence 233444444444
Q ss_pred HHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcCC
Q 046389 233 EIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYIISKHDDMGRTMFHIAVLNHQVKILELINEMGS 312 (558)
Q Consensus 233 ~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga 312 (558)
||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+.+|+.+++++|+++|+
T Consensus 156 -------------------------L~~A~~~g~~~~v~~Ll~~gadv-n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Ga 209 (269)
T 4b93_B 156 -------------------------LIYACSGGHHELVALLLQHGASI-NASNNKGNTALHEAVIEKHVFVVELLLLHGA 209 (269)
T ss_dssp -------------------------HHHHHHTTCGGGHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTC
T ss_pred -------------------------HHHHHHCCCHHHHHHHHHCCCCC-CccccCCCcHHHHHHHcCCHHHHHHHHHCCC
Confidence 44555555555666666666665 5666666666666666666666666666666
Q ss_pred cccceeeeccCCCCchhhHhhcCCC
Q 046389 313 MKDRIVSRRDYGGNNILHMAGMQPS 337 (558)
Q Consensus 313 ~~~~~in~~d~~g~TpLh~A~~~~~ 337 (558)
+ +|.+|++|+||||+|+++++
T Consensus 210 d----~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 210 S----VQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp C----SCCCCTTSCCSGGGSCTTCH
T ss_pred C----CCCcCCCCCCHHHHHHhCCc
Confidence 5 45566666666666655543
No 27
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=7e-38 Score=293.39 Aligned_cols=222 Identities=18% Similarity=0.195 Sum_probs=197.1
Q ss_pred CCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHH
Q 046389 40 SKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAG 119 (558)
Q Consensus 40 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A 119 (558)
+..++||||.|+..|+.+.+++|++..+..++.+|..|.||||+|+..|+.+++++|+++|+++ ...+ ..|.||||+|
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A 80 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV-NDKD-DAGWSPLHIA 80 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCC-TTSCCHHHHH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCC-CCcC-CCCCCHHHHH
Confidence 4568899999999999999999999767778999999999999999999999999999999986 4566 7999999999
Q ss_pred HHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhc
Q 046389 120 AMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQN 199 (558)
Q Consensus 120 ~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~ 199 (558)
+..|+.+++++|+++++ +++.+|..|.||||+|+..++.
T Consensus 81 ~~~~~~~~v~~Ll~~g~---------------------------------~~~~~~~~g~t~L~~A~~~~~~-------- 119 (231)
T 3aji_A 81 ASAGXDEIVKALLVKGA---------------------------------HVNAVNQNGCTPLHYAASKNRH-------- 119 (231)
T ss_dssp HHHTCHHHHHHHHHTTC---------------------------------CTTCCCTTSCCHHHHHHHTTCH--------
T ss_pred HHcCHHHHHHHHHHcCC---------------------------------CCCCCCCCCCCHHHHHHHcCCH--------
Confidence 99999999999988765 3456688899999999988865
Q ss_pred ccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCc
Q 046389 200 QQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPY 279 (558)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~ 279 (558)
+++++|++.+.+.+.. +..|.||||+|+..|+.+++++|+++|++
T Consensus 120 ------------------------------~~~~~Ll~~g~~~~~~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 164 (231)
T 3aji_A 120 ------------------------------EIAVMLLEGGANPDAK-----DHYDATAMHRAAAKGNLKMVHILLFYKAS 164 (231)
T ss_dssp ------------------------------HHHHHHHHTTCCTTCC-----CTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred ------------------------------HHHHHHHHcCCCCCCc-----CCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Confidence 7888888888776544 46789999999999999999999999999
Q ss_pred ccccccCCCCcHHHHHHHcCcHHHHHHHHhcCCcccceeeeccCCCCchhhHhhcCCCCCCCccc
Q 046389 280 IISKHDDMGRTMFHIAVLNHQVKILELINEMGSMKDRIVSRRDYGGNNILHMAGMQPSNEGPNVV 344 (558)
Q Consensus 280 ~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~~~~~in~~d~~g~TpLh~A~~~~~~~~~~~l 344 (558)
+ +.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|..|+||||+|+..++.+++++|
T Consensus 165 ~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~~~~i~~lL 224 (231)
T 3aji_A 165 T-NIQDTEGNTPLHLACDEERVEEAKFLVTQGAS----IYIENKEEKTPLQVAKGGLGLILKRLA 224 (231)
T ss_dssp S-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----SCCCCTTSCCHHHHSCHHHHHHHHHHH
T ss_pred c-cccCCCCCCHHHHHHHCCCHHHHHHHHHCCCC----CCCCCCCCCCHHHHHHhhHHHHHHHHH
Confidence 8 89999999999999999999999999999999 779999999999999987775554444
No 28
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=5.7e-38 Score=303.31 Aligned_cols=252 Identities=16% Similarity=0.092 Sum_probs=184.2
Q ss_pred cccccCCCCcHhHHHHHcCCHHHHHHHHHcCccc--ccccCCCCCccHHHHHHHcCChHHHHHHHhcCc-cccCccchhH
Q 046389 70 LKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHL--ALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDLIE 146 (558)
Q Consensus 70 ~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~--~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t 146 (558)
++.+|.+|.||||+|+..|+.+++++|+++|++. ....+ ..|.||||+|+..|+.+++++|+++|+ .+..+..|.|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t 80 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQN-DLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHT 80 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCC
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Confidence 5678999999999999999999999999998873 24566 899999999999999999999999998 6678889999
Q ss_pred HHHHHHHhccHHHHHHHHhhCCcccc------------cccCCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccc
Q 046389 147 LLIILIKTDLYEVALRLFKDHPQLAT------------LRDSNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVG 214 (558)
Q Consensus 147 ~l~~a~~~~~~~~~~~Ll~~~~~~~~------------~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (558)
|||.|+..++.++++.|++....... .....+.++++.++..+..
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 137 (282)
T 1oy3_D 81 ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPE----------------------- 137 (282)
T ss_dssp HHHHHTTTTCHHHHHHHSSSCCSSCCCC----------------------------------------------------
T ss_pred HHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccc-----------------------
Confidence 99999999999999999987433211 0111222333322222211
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCcccccccC-CCCcHHH
Q 046389 215 STKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYIISKHDD-MGRTMFH 293 (558)
Q Consensus 215 ~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~-~g~t~Lh 293 (558)
......+... ..+.+..+..|.||||+|+..|+.+++++|+++|+++ +..+. .|+||||
T Consensus 138 --------------~~~~~~~~~~-----~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~ 197 (282)
T 1oy3_D 138 --------------NEEEPRDEDW-----RLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADL-NKPEPTCGRTPLH 197 (282)
T ss_dssp --------------------CCCG-----GGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHH
T ss_pred --------------hhhhhhhhhh-----hhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCcCHHH
Confidence 1111111111 2233445678999999999999999999999999999 77765 5999999
Q ss_pred HHHHcCcHHHHHHHHhcCCcccceeeeccCCCCchhhHhhcCCCCCCCccccchHHHHHHHHHHHHHHHhhcCCcchhhc
Q 046389 294 IAVLNHQVKILELINEMGSMKDRIVSRRDYGGNNILHMAGMQPSNEGPNVVFGAVLQLQQEVLWFKKVSEIVRPVDAEAR 373 (558)
Q Consensus 294 ~A~~~~~~~iv~~Ll~~ga~~~~~in~~d~~g~TpLh~A~~~~~~~~~~~l~~~~l~~~~~~~~~~~v~~l~~~~~~~~~ 373 (558)
+|+.+|+.+++++|+++|++ ++.+|..|+||||+|+..++.+++++| +..|++++.+
T Consensus 198 ~A~~~~~~~~v~~Ll~~gad----~~~~d~~g~tpL~~A~~~~~~~~v~~L-------------------l~~ga~~~~~ 254 (282)
T 1oy3_D 198 LAVEAQAASVLELLLKAGAD----PTARMYGGRTPLGSALLRPNPILARLL-------------------RAHGAPEPED 254 (282)
T ss_dssp HHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHTSSCHHHHHHH-------------------HHTTCCCCCC
T ss_pred HHHHcCCHHHHHHHHHcCCC----CcccccCCCCHHHHHHHcCCcHHHHHH-------------------HHcCCCcCcC
Confidence 99999999999999999999 779999999999999999987655544 3489999999
Q ss_pred cCCCCChhhhhHHhh
Q 046389 374 NYGLQTPRELFTQSH 388 (558)
Q Consensus 374 n~~g~tpl~~a~~~~ 388 (558)
|.+|+||++++....
T Consensus 255 ~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 255 GGDKLSPCSSSGSDS 269 (282)
T ss_dssp C--------------
T ss_pred CCcccccccccCCcc
Confidence 999999999997544
No 29
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=4.5e-37 Score=289.06 Aligned_cols=227 Identities=20% Similarity=0.192 Sum_probs=190.6
Q ss_pred cccccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHh
Q 046389 2 TCEEKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTAL 81 (558)
Q Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpL 81 (558)
+.+|.+|.||||.|+..|+.+++++|++. +.+++.. +..|.||||+|+..|+.+++++|++. +.+++.+|..|.|||
T Consensus 5 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L 81 (237)
T 3b7b_A 5 KMEHQNKRSPLHAAAEAGHVDICHMLVQA-GANIDTC-SEDQRTPLMEAAENNHLEAVKYLIKA-GALVDPKDAEGSTCL 81 (237)
T ss_dssp CCSSCCSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHTT-TCCCCCCCTTSCCHH
T ss_pred ccccCCCCCHHHHHHHcCcHHHHHHHHHc-CCCcCcc-CCCCCCHHHHHHHhCCHHHHHHHHhC-CCCCCCCCCCCCcHH
Confidence 45788999999999999999999988876 6777776 88999999999999999999999998 899999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHH
Q 046389 82 SLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVAL 161 (558)
Q Consensus 82 h~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~ 161 (558)
|+|+..|+.+++++|+++++......+ ..|.||||+|+..|+.+++++|+++++
T Consensus 82 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~------------------------- 135 (237)
T 3b7b_A 82 HLAAKKGHYEVVQYLLSNGQMDVNCQD-DGGWTPMIWATEYKHVDLVKLLLSKGS------------------------- 135 (237)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTC-------------------------
T ss_pred HHHHHcCCHHHHHHHHhCCCCCcccCC-CCCCCHHHHHHHcCCHHHHHHHHHCCC-------------------------
Confidence 999999999999999999943335566 899999999999999999999998876
Q ss_pred HHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhc
Q 046389 162 RLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIR 241 (558)
Q Consensus 162 ~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~ 241 (558)
+++.++..|.||||+|+..|+. +++++|++.+.+
T Consensus 136 --------~~~~~~~~g~t~L~~A~~~~~~--------------------------------------~~~~~Ll~~g~~ 169 (237)
T 3b7b_A 136 --------DINIRDNEENICLHWAAFSGCV--------------------------------------DIAEILLAAKCD 169 (237)
T ss_dssp --------CTTCCCTTSCCHHHHHHHHCCH--------------------------------------HHHHHHHTTTCC
T ss_pred --------CCCccCCCCCCHHHHHHHCCCH--------------------------------------HHHHHHHHcCCC
Confidence 2234455566666666655543 555666655555
Q ss_pred cchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHh
Q 046389 242 SQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYIISKHDDMGRTMFHIAVLNHQVKILELINE 309 (558)
Q Consensus 242 ~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~ 309 (558)
++.. +..|.||||+|++.|+.+++++|+++|+++ +.+|.+|+||||+|+.+++.+.+..+++
T Consensus 170 ~~~~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~-~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 170 LHAV-----NIHGDSPLHIAARENRYDCVVLFLSRDSDV-TLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp TTCC-----CTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred CCCc-----CCCCCCHHHHHHHhCCHhHHHHHHHcCCCC-CccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4433 356789999999999999999999999998 8999999999999999999876666554
No 30
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=296.39 Aligned_cols=205 Identities=16% Similarity=0.189 Sum_probs=147.0
Q ss_pred CCCCchHHHHHHHCCCHHHHHHHhcCCCc-------ccccccCCCCcHhHHHHHcCCH-HHHHHHHHcCcccccccCCCC
Q 046389 40 SKLGETALHVAASAGRIDFVKNLLGYSPQ-------VLKLTDYFGQTALSLAAASGNL-DLVQLMTEDNEHLALDRESVD 111 (558)
Q Consensus 40 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~-------~~~~~d~~g~TpLh~A~~~g~~-eiv~~Ll~~~~~~~~~~~~~~ 111 (558)
|..+.+|||.||..|+.++|++|++.+.. .++..|..|.||||.|+..++. +++++|++.|+++ +.++ .+
T Consensus 8 d~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadv-n~~d-~~ 85 (269)
T 4b93_B 8 DYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGV-NVTS-QD 85 (269)
T ss_dssp CCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCT-TCCC-TT
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCC-CCcC-CC
Confidence 66778999999999999999999987322 2566778899999999987775 4789999999987 4566 78
Q ss_pred CccHHHHHHHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCc
Q 046389 112 QYLPIHAGAMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMM 191 (558)
Q Consensus 112 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~ 191 (558)
|+||||+|+..|+.++|++|++.++ +++.++
T Consensus 86 G~TpLh~A~~~g~~~~v~~Ll~~~a---------------------------------~~~~~~---------------- 116 (269)
T 4b93_B 86 GSSPLHVAALHGRADLIPLLLKHGA---------------------------------NAGARN---------------- 116 (269)
T ss_dssp SCCHHHHHHHTTCTTHHHHHHHTTC---------------------------------CTTCCC----------------
T ss_pred CCCHHHHHHHcCcHHHHHHHHhcCC---------------------------------CcCccC----------------
Confidence 9999999999999999998887764 111122
Q ss_pred hhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHH
Q 046389 192 SSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLR 271 (558)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~ 271 (558)
..|.||+|.|+..++.++++
T Consensus 117 ------------------------------------------------------------~~g~t~l~~a~~~~~~~~~~ 136 (269)
T 4b93_B 117 ------------------------------------------------------------ADQAVPLHLACQQGHFQVVK 136 (269)
T ss_dssp ------------------------------------------------------------TTCCCHHHHHHHHTCHHHHH
T ss_pred ------------------------------------------------------------CCCCCccccccccChHHHHH
Confidence 34577888888889999999
Q ss_pred HHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcCCcccceeeeccCCCCchhhHhhcCCCCCCCccccchHHHH
Q 046389 272 VLIREYPYIISKHDDMGRTMFHIAVLNHQVKILELINEMGSMKDRIVSRRDYGGNNILHMAGMQPSNEGPNVVFGAVLQL 351 (558)
Q Consensus 272 ~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~~~~~in~~d~~g~TpLh~A~~~~~~~~~~~l~~~~l~~ 351 (558)
+|+++|+++ +.+|..|+||||+|+.+|+.+++++|+++|++ +|.+|..|+||||+|+..|+.+++++|
T Consensus 137 ~Ll~~g~~~-n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad----vn~~~~~g~t~Lh~A~~~g~~~~v~~L------- 204 (269)
T 4b93_B 137 CLLDSNAKP-NKKDLSGNTPLIYACSGGHHELVALLLQHGAS----INASNNKGNTALHEAVIEKHVFVVELL------- 204 (269)
T ss_dssp HHHHTTCCS-CCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCC----TTCBCTTSCBHHHHHHHTTCHHHHHHH-------
T ss_pred HHHHCCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC----CCccccCCCcHHHHHHHcCCHHHHHHH-------
Confidence 999999998 99999999999999999999999999999999 789999999999999999997665554
Q ss_pred HHHHHHHHHHHhhcCCcchhhccCCCCC
Q 046389 352 QQEVLWFKKVSEIVRPVDAEARNYGLQT 379 (558)
Q Consensus 352 ~~~~~~~~~v~~l~~~~~~~~~n~~g~t 379 (558)
+..|++++.+|.+|+|
T Consensus 205 ------------l~~Gad~~~~d~~G~T 220 (269)
T 4b93_B 205 ------------LLHGASVQVLNKRQRT 220 (269)
T ss_dssp ------------HHTTCCSCCCCTTSCC
T ss_pred ------------HHCCCCCCCcCCCCCC
Confidence 3378888888877753
No 31
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=9.9e-36 Score=280.21 Aligned_cols=230 Identities=15% Similarity=0.106 Sum_probs=153.7
Q ss_pred CCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHH
Q 046389 40 SKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAG 119 (558)
Q Consensus 40 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A 119 (558)
|..|.||||.|++.|+.+++++|++. +.+++.+|..|.||||+|+..|+.+++++|+++|++++...+ ..|.||||+|
T Consensus 6 d~~~~~~l~~A~~~g~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~~~t~L~~A 83 (240)
T 3eu9_A 6 DDYSTWDIVKATQYGIYERCRELVEA-GYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGG-DLNSTPLHWA 83 (240)
T ss_dssp SCGGGCCHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBT-TTTBCHHHHH
T ss_pred ccccchHHHHHHHcCChHHHHHHHHc-CCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcC-CcCCChhHHH
Confidence 44455555555555555555555555 455555555555555555555555555555555555433333 4455555555
Q ss_pred HHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhh
Q 046389 120 AMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQ 198 (558)
Q Consensus 120 ~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~ 198 (558)
+..|+.+++++|++.++ .+..+..|.||||.|+..++.++++.|++. +.+++.++..|.||||+|+..++..
T Consensus 84 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~g~t~l~~a~~~~~~~------ 156 (240)
T 3eu9_A 84 TRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAK-GQDVDMMDQNGMTPLMWAAYRTHSV------ 156 (240)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHCCSS------
T ss_pred HHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhc-CCCccccCCCCCcHHHHHHHhCChH------
Confidence 55555555555555554 333445555555555555555555555554 4456778888999999998665421
Q ss_pred cccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCC
Q 046389 199 NQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYP 278 (558)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 278 (558)
+++++|++.+.+.+..+. ..|.||||+|+..|+.+++++|+++|+
T Consensus 157 -------------------------------~~~~~L~~~~~~~~~~~~----~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 201 (240)
T 3eu9_A 157 -------------------------------DPTRLLLTFNVSVNLGDK----YHKNTALHWAVLAGNTTVISLLLEAGA 201 (240)
T ss_dssp -------------------------------TTHHHHHHTTCCTTCCCT----TTCCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred -------------------------------HHHHHHHhcCCCcchhhc----cCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 556677777766664431 367999999999999999999999999
Q ss_pred cccccccCCCCcHHHHHHHcCcHHHHHHHHhcCCcc
Q 046389 279 YIISKHDDMGRTMFHIAVLNHQVKILELINEMGSMK 314 (558)
Q Consensus 279 ~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~~ 314 (558)
++ +.+|..|+||||+|+++|+.+++++|++.+++.
T Consensus 202 ~~-~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 202 NV-DAQNIKGESALDLAKQRKNVWMINHLQEARQAK 236 (240)
T ss_dssp CT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHHC---
T ss_pred CC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhcc
Confidence 98 899999999999999999999999999998874
No 32
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=4.1e-36 Score=290.35 Aligned_cols=237 Identities=13% Similarity=0.067 Sum_probs=201.1
Q ss_pred HHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHH
Q 046389 16 ALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQL 95 (558)
Q Consensus 16 ~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~ 95 (558)
+..++.+.+..+|.+. +++.+ |.+|.||||+|+..|+.++|++|++. +++++.+| |.||||+|+..|+.+++++
T Consensus 7 i~~~~~~~v~~lL~~~--~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~--g~t~L~~A~~~g~~~~v~~ 80 (285)
T 3kea_A 7 INTWKSKQLKSFLSSK--DTFKA-DVHGHSASYYAIADNNVRLVCTLLNA-GALKNLLE--NEFPLHQAATLEDTKIVKI 80 (285)
T ss_dssp GGGCCHHHHHHHHHST--TTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHT-TGGGSCCT--TCCHHHHHTTSSSCHHHHH
T ss_pred HHhcCHHHHHHHHHhC--CCCcc-CCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCCC--CCCHHHHHHHcCCHHHHHH
Confidence 4566777777788775 46666 89999999999999999999999999 88888874 9999999999999999999
Q ss_pred HHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc-cccCccch-hHHHHHHHHhccHHHHHHHHhhCCccccc
Q 046389 96 MTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDL-IELLIILIKTDLYEVALRLFKDHPQLATL 173 (558)
Q Consensus 96 Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~-~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~ 173 (558)
|+++|+++ ...+ ..|.||||+|+..|+.+++++|+++|+ .+..+..| .||||.|+..|+.++++.|++.+...
T Consensus 81 Ll~~ga~~-~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~--- 155 (285)
T 3kea_A 81 LLFSGLDD-SQFD-DKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--- 155 (285)
T ss_dssp HHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT---
T ss_pred HHHCCCCC-CCcC-CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc---
Confidence 99999997 4566 799999999999999999999999998 66677777 79999999999999999999985433
Q ss_pred ccC-CCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhcc
Q 046389 174 RDS-NEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIE 252 (558)
Q Consensus 174 ~d~-~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~ 252 (558)
.+. .|.||||+|+..|+. +++++|++.|++++..+ .
T Consensus 156 ~~~~~g~t~L~~A~~~g~~--------------------------------------~~v~~Ll~~gad~n~~~-----~ 192 (285)
T 3kea_A 156 FDLAILLSCIHITIKNGHV--------------------------------------DMMILLLDYMTSTNTNN-----S 192 (285)
T ss_dssp CCCSTHHHHHHHHHHTTCH--------------------------------------HHHHHHHHHHHHTCTTC-----C
T ss_pred ccccCCccHHHHHHHcChH--------------------------------------HHHHHHHHcCCCCCccc-----C
Confidence 233 788999999888875 88888888888766543 6
Q ss_pred CCchH-HHHHHhcChHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcCCcc
Q 046389 253 RPFQL-TFVAAEKGNIEFLRVLIREYPYIISKHDDMGRTMFHIAVLNHQVKILELINEMGSMK 314 (558)
Q Consensus 253 ~g~tp-Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~~ 314 (558)
.|.|| ||+|+..|+.+++++|+++|+++ +..| +.|+..|+.+++++|+++|++.
T Consensus 193 ~g~t~~L~~A~~~~~~~~v~~Ll~~gad~-~~~~-------~~a~~~~~~~iv~~Ll~~g~~~ 247 (285)
T 3kea_A 193 LLFIPDIKLAIDNKDIEMLQALFKYDINI-YSAN-------LENVLLDDAEIAKMIIEKHVEY 247 (285)
T ss_dssp CBCCTTHHHHHHHTCHHHHHHHTTSCBCS-TTTT-------GGGGTTTCHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCC-CCCC-------hhhhhcCCHHHHHHHHHcCCCC
Confidence 78887 99999999999999999999887 6666 3567788999999999998873
No 33
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.5e-35 Score=275.42 Aligned_cols=218 Identities=17% Similarity=0.168 Sum_probs=165.0
Q ss_pred CcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCC--ccccc-ccCCCCcHhHHH
Q 046389 8 TLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSP--QVLKL-TDYFGQTALSLA 84 (558)
Q Consensus 8 g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~--~~~~~-~d~~g~TpLh~A 84 (558)
|+||||.|+..|+.+.++.|++..+...+.. +..|.||||+|+..|+.+++++|++. + .+++. .|..|.||||+|
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~g~t~L~~A 79 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQK-DQDGRIPLHWSVSFQAHEITSFLLSK-MENVNLDDYPDDSGWTPFHIA 79 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHT-CTTCCGGGCCCTTSCCHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccC-CCCCCCHHHHHHHcCCHHHHHHHHhc-cccccccccCCCCCCCHHHHH
Confidence 6788888888888888888888765544444 78888888888888888888888887 4 45555 778888888888
Q ss_pred HHcCCHHHHHHHHHcC--cccccccCCCCCccHHHHHHHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHH
Q 046389 85 AASGNLDLVQLMTEDN--EHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALR 162 (558)
Q Consensus 85 ~~~g~~eiv~~Ll~~~--~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ 162 (558)
+..|+.+++++|+++| +++ ...+ ..|.||||+|+..|+.+++++|+++++
T Consensus 80 ~~~~~~~~~~~Ll~~g~~~~~-~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~-------------------------- 131 (228)
T 2dzn_A 80 CSVGNLEVVKSLYDRPLKPDL-NKIT-NQGVTCLHLAVGKKWFEVSQFLIENGA-------------------------- 131 (228)
T ss_dssp HHHCCHHHHHHHHSSSSCCCT-TCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTC--------------------------
T ss_pred HHcCCHHHHHHHHhCCCCccc-ccCC-cCCCCHHHHHHHcCCHhHHHHHHHcCC--------------------------
Confidence 8888888888888887 554 3445 678888888888888888888887765
Q ss_pred HHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHh-hc
Q 046389 163 LFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEV-IR 241 (558)
Q Consensus 163 Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~-~~ 241 (558)
+++.+|..|.||||+|+..|+. +++++|++.+ .+
T Consensus 132 -------~~~~~~~~g~t~L~~A~~~~~~--------------------------------------~~v~~Ll~~g~~~ 166 (228)
T 2dzn_A 132 -------SVRIKDKFNQIPLHRAASVGSL--------------------------------------KLIELLCGLGKSA 166 (228)
T ss_dssp -------CSCCCCTTSCCHHHHHHHTTCH--------------------------------------HHHHHHHTTTCCC
T ss_pred -------CccccCCCCCCHHHHHHHcCCH--------------------------------------HHHHHHHhcCccc
Confidence 3344555566666666655543 5555555555 33
Q ss_pred cchhhhhhhccCCchHHHHHHhcChHHHHHHHH-HhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHh
Q 046389 242 SQDSEISTLIERPFQLTFVAAEKGNIEFLRVLI-REYPYIISKHDDMGRTMFHIAVLNHQVKILELINE 309 (558)
Q Consensus 242 ~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll-~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~ 309 (558)
.+. .+..|.||||+|+..|+.+++++|+ ++|+++ +.+|.+|+||||+|+.. +++++|++
T Consensus 167 ~~~-----~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~-~~~~~~g~t~l~~A~~~---~~~~~l~~ 226 (228)
T 2dzn_A 167 VNW-----QDKQGWTPLFHALAEGHGDAAVLLVEKYGAEY-DLVDNKGAKAEDVALNE---QVKKFFLN 226 (228)
T ss_dssp SCC-----CCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCS-CCBCTTSCBGGGGCSST---THHHHHHT
T ss_pred ccC-----cCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCC-CccCCCCCcHHHHHHHH---HHHHHHHh
Confidence 332 3366788888999999999999999 889998 99999999999999764 56667765
No 34
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.7e-35 Score=275.54 Aligned_cols=216 Identities=22% Similarity=0.215 Sum_probs=175.6
Q ss_pred CCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHH
Q 046389 19 DDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTE 98 (558)
Q Consensus 19 g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~ 98 (558)
|+.+++++|++. +.+++...|.+|.||||+|+..|+.+++++|++. +.+++.+|..|.||||+|+..|+.+++++|++
T Consensus 2 g~~~~i~~Ll~~-g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 79 (223)
T 2f8y_A 2 DAPAVISDFIYQ-GASLHNQTDRTGETALHLAARYSRSDAAKRLLEA-SADANIQDNMGRTPLHAAVSADAQGVFQILIR 79 (223)
T ss_dssp ---CCEETTEET-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHc-CCCcccccCCCCCchHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 566777766665 5555555478889999999999999999999988 88888888889999999999999999999998
Q ss_pred cCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCC
Q 046389 99 DNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNE 178 (558)
Q Consensus 99 ~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g 178 (558)
+++......+ ..|.||||+|+..|+.+++++|+++++ +++.+|..|
T Consensus 80 ~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~---------------------------------~~~~~~~~g 125 (223)
T 2f8y_A 80 NRATDLDARM-HDGTTPLILAARLAVEGMLEDLINSHA---------------------------------DVNAVDDLG 125 (223)
T ss_dssp BTTSCTTCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTC---------------------------------CTTCBCTTS
T ss_pred cCCCCcccCC-CCCCcHHHHHHHhCcHHHHHHHHHcCC---------------------------------CCcCcCCCC
Confidence 8874445566 788899999998888888888887664 344566777
Q ss_pred CcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHH
Q 046389 179 ETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLT 258 (558)
Q Consensus 179 ~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpL 258 (558)
.||||+|+..++. +++++|++.+.+++.. +..|.|||
T Consensus 126 ~t~L~~A~~~~~~--------------------------------------~~v~~Ll~~g~~~~~~-----~~~g~t~L 162 (223)
T 2f8y_A 126 KSALHWAAAVNNV--------------------------------------DAAVVLLKNGANKDMQ-----NNREETPL 162 (223)
T ss_dssp CBHHHHHHHTTCH--------------------------------------HHHHHHHHTTCCTTCC-----CTTCCCHH
T ss_pred CcHHHHHHHcCCH--------------------------------------HHHHHHHHcCCCCCCc-----CCCCcCHH
Confidence 7777777777654 6777777776665543 36789999
Q ss_pred HHHHhcChHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcCCcc
Q 046389 259 FVAAEKGNIEFLRVLIREYPYIISKHDDMGRTMFHIAVLNHQVKILELINEMGSMK 314 (558)
Q Consensus 259 h~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~~ 314 (558)
|+|+..|+.+++++|+++|+++ +.+|..|+||||+|+.+++.+++++|+++|+..
T Consensus 163 ~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~ 217 (223)
T 2f8y_A 163 FLAAREGSYETAKVLLDHFANR-DITDHMDRLPRDIAQERMHHDIVRLLDEYNLVR 217 (223)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSS
T ss_pred HHHHHcCCHHHHHHHHHcCCCC-ccccccCCCHHHHHHHhcchHHHHHHHHcCCCc
Confidence 9999999999999999999998 899999999999999999999999999999874
No 35
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=7.8e-36 Score=290.98 Aligned_cols=249 Identities=18% Similarity=0.173 Sum_probs=209.2
Q ss_pred cccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHH
Q 046389 4 EEKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSL 83 (558)
Q Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~ 83 (558)
.+.+|.||||.|+..|+.+.++.|++. +.+++.. |..|.||||+|+..|+.++|++|++. +++++.+|..|.||||+
T Consensus 36 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~tpL~~ 112 (299)
T 1s70_B 36 VKFDDGAVFLAACSSGDTEEVLRLLER-GADINYA-NVDGLTALHQACIDDNVDMVKFLVEN-GANINQPDNEGWIPLHA 112 (299)
T ss_dssp CEECHHHHHHHHHHHTCHHHHHHHHHH-CCCTTCB-CTTCCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHH
T ss_pred cccCCccHHHHHHHcCCHHHHHHHHHc-CCCCccc-CCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHH
Confidence 356788999999999999999999887 6678877 88999999999999999999999998 99999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCcccc--CccchhHHHHHHHHhccHHHHH
Q 046389 84 AAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITEGQL--DNKDLIELLIILIKTDLYEVAL 161 (558)
Q Consensus 84 A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~--~~~~~~t~l~~a~~~~~~~~~~ 161 (558)
|+..|+.+++++|+++|+++ ...+ ..|.||||+|+..++.++++.++.....+. ....+.+++ ...+.
T Consensus 113 A~~~g~~~~v~~Ll~~g~~~-~~~~-~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~--------~~~~~ 182 (299)
T 1s70_B 113 AASCGYLDIAEYLISQGAHV-GAVN-SEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIM--------LRDAR 182 (299)
T ss_dssp HHHHTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHH--------HHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCC-CCcC-CCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHH--------HHHHH
Confidence 99999999999999999987 4566 899999999999999999999987654221 222222332 23455
Q ss_pred HHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhc
Q 046389 162 RLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIR 241 (558)
Q Consensus 162 ~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~ 241 (558)
.++..........+..|.||||+|+..|+. +++++|++.+++
T Consensus 183 ~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~--------------------------------------~~v~~Ll~~g~d 224 (299)
T 1s70_B 183 QWLNSGHINDVRHAKSGGTALHVAAAKGYT--------------------------------------EVLKLLIQARYD 224 (299)
T ss_dssp HHHHHTCCCCCCCTTTCCCHHHHHHHHTCH--------------------------------------HHHHHHHTTTCC
T ss_pred HHHhccCcchhhhcCCCCCHHHHHHHCCcH--------------------------------------HHHHHHHHcCCC
Confidence 666766666666788999999999988875 899999998877
Q ss_pred cchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhc
Q 046389 242 SQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYIISKHDDMGRTMFHIAVLNHQVKILELINEM 310 (558)
Q Consensus 242 ~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ 310 (558)
++.. |..|.||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+... .+.++.+++.
T Consensus 225 ~~~~-----d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~-~~~d~~g~t~l~~A~~~~-~~~l~~l~~~ 286 (299)
T 1s70_B 225 VNIK-----DYDGWTPLHAAAHWGKEEACRILVENLCDM-EAVNKVGQTAFDVADEDI-LGYLEELQKK 286 (299)
T ss_dssp TTCC-----CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCTTTSCCSGG-GHHHHHHHHH
T ss_pred CCCc-----CCCCCcHHHHHHhcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHHH-HHHHHHHHHH
Confidence 6654 478999999999999999999999999998 999999999999997654 4444444443
No 36
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=4.5e-37 Score=303.10 Aligned_cols=259 Identities=11% Similarity=0.021 Sum_probs=188.5
Q ss_pred cCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCccccc-----------------ccCCCCcH
Q 046389 18 DDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKL-----------------TDYFGQTA 80 (558)
Q Consensus 18 ~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~-----------------~d~~g~Tp 80 (558)
....+++++|++ .|.+++.. +..|.|++| |+.++|+.|+++ +.+.+. +.....+.
T Consensus 29 ~~~~dlv~~ll~-~ga~i~~~-~~~g~~~~~-----g~~~~v~~Ll~~-g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 100 (327)
T 1sw6_A 29 TFTHDLTSDFLS-SPLKIMKA-LPSPVVNDN-----EQKMKLEAFLQR-LLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQ 100 (327)
T ss_dssp ECCTTCCCSTTT-SSCCCEEC-BCCCCCCCH-----HHHHHHHHHHHH-HHC----------------------------
T ss_pred hhcCchHHHHhh-CCcccccC-CCCCCcccC-----chhHHHHHHHHh-ccCCccccchHhhhcccccccccccCCccch
Confidence 455666775554 47778777 788888877 888888888886 544333 11112233
Q ss_pred hHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhcc---
Q 046389 81 LSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDL--- 156 (558)
Q Consensus 81 Lh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~--- 156 (558)
+|+|+..+..+++++|++.|++++...+ ..|+||||+|+..|+.++|++|+++|+ .+..+..|.||||+|+..|+
T Consensus 101 ~~~a~~~~~~~~~~~l~~~g~dvn~~~d-~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~ 179 (327)
T 1sw6_A 101 QHVSFDSLLQEVNDAFPNTQLNLNIPVD-EHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYD 179 (327)
T ss_dssp ---CHHHHHHHHHHHCTTSCCCSCSCCS-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHH
T ss_pred hHHHHHhhHHHHHHHHHhcCCCcccccC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhccccc
Confidence 5778888888888888888888754356 788899999999999999999998888 66778888899999988887
Q ss_pred HHHHHHHHhhCCcccccccCCCCcHHHHHhc----CCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHH
Q 046389 157 YEVALRLFKDHPQLATLRDSNEETALHALAG----KSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLV 232 (558)
Q Consensus 157 ~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v 232 (558)
.+.++.|++....+++.+|..|+||||+|+. .|+. +++
T Consensus 180 ~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~--------------------------------------~~v 221 (327)
T 1sw6_A 180 SGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCS--------------------------------------AAA 221 (327)
T ss_dssp TTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCH--------------------------------------HHH
T ss_pred HHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccH--------------------------------------HHH
Confidence 6777777777656788889999999999987 5554 555
Q ss_pred HHHHHHhhcc---------------chhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCcccccccCCCCcHHHHHHH
Q 046389 233 EIIWKEVIRS---------------QDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYIISKHDDMGRTMFHIAVL 297 (558)
Q Consensus 233 ~~l~~~~~~~---------------~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~ 297 (558)
+.|++.+... ...+.+..+..|.||||.|+. +++|+++ ++ +.+|..|+||||+|+.
T Consensus 222 ~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~--~~-n~~d~~G~TpLh~A~~ 292 (327)
T 1sw6_A 222 KYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN--ML-NAQDSNGDTCLNIAAR 292 (327)
T ss_dssp HHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHH--TT-TCCCTTSCCHHHHHHH
T ss_pred HHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh--CC-CCCCCCCCCHHHHHHH
Confidence 5555553211 123344566889999999996 8999998 44 8899999999999999
Q ss_pred cCcHHHHHHHHhcCCcccceeeeccCCCCchhhHhhcCC
Q 046389 298 NHQVKILELINEMGSMKDRIVSRRDYGGNNILHMAGMQP 336 (558)
Q Consensus 298 ~~~~~iv~~Ll~~ga~~~~~in~~d~~g~TpLh~A~~~~ 336 (558)
+|+.+++++|+++|++ ++.+|.+|+||||+|++.|
T Consensus 293 ~g~~~~v~~Ll~~Gad----~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 293 LGNISIVDALLDYGAD----PFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HCCHHHHHHHHHTTCC----TTCCCTTSCCGGGGTCC--
T ss_pred cCCHHHHHHHHHcCCC----CcccCCCCCCHHHHHHhcC
Confidence 9999999999999999 7799999999999999864
No 37
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=6e-35 Score=282.16 Aligned_cols=228 Identities=12% Similarity=0.102 Sum_probs=199.1
Q ss_pred CCC-HHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHH
Q 046389 53 AGR-IDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYL 131 (558)
Q Consensus 53 ~g~-~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~L 131 (558)
..+ .++.++|.+. +++.+|.+|.||||+|+..|+.+++++|+++|++++. .+|.||||+|+..|+.+++++|
T Consensus 9 ~~~~~~v~~lL~~~---~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~----~~g~t~L~~A~~~g~~~~v~~L 81 (285)
T 3kea_A 9 TWKSKQLKSFLSSK---DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNL----LENEFPLHQAATLEDTKIVKIL 81 (285)
T ss_dssp GCCHHHHHHHHHST---TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSC----CTTCCHHHHHTTSSSCHHHHHH
T ss_pred hcCHHHHHHHHHhC---CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC----CCCCCHHHHHHHcCCHHHHHHH
Confidence 344 4445555443 4789999999999999999999999999999998643 3689999999999999999999
Q ss_pred HhcCc-cccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCC-CcHHHHHhcCCCchhhhhhhcccchhhhhhc
Q 046389 132 YSITE-GQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNE-ETALHALAGKSMMSSYLANQNQQGMLQNFFS 209 (558)
Q Consensus 132 l~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g-~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~ 209 (558)
+++|+ .+..+..|.||||.|+..|+.++++.|++. +.+++.++..| .||||+|+..|+.
T Consensus 82 l~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~~t~L~~A~~~~~~------------------ 142 (285)
T 3kea_A 82 LFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKK-NWRLMFYGKTGWKTSFYHAVMLNDV------------------ 142 (285)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-CGGGGGCSSSGGGSHHHHHHHTTCH------------------
T ss_pred HHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCCCccCCCCCCCHHHHHHHcCCH------------------
Confidence 99998 667888999999999999999999999998 78888999999 8999999998876
Q ss_pred ccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCcccccccCCCC
Q 046389 210 SANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYIISKHDDMGR 289 (558)
Q Consensus 210 ~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~ 289 (558)
+++++|++.+.+.... ..|.||||+|+..|+.+++++|+++|+++ +.+|..|+
T Consensus 143 --------------------~~v~~Ll~~g~~~~~~------~~g~t~L~~A~~~g~~~~v~~Ll~~gad~-n~~~~~g~ 195 (285)
T 3kea_A 143 --------------------SIVSYFLSEIPSTFDL------AILLSCIHITIKNGHVDMMILLLDYMTST-NTNNSLLF 195 (285)
T ss_dssp --------------------HHHHHHHTTSCTTCCC------STHHHHHHHHHHTTCHHHHHHHHHHHHHT-CTTCCCBC
T ss_pred --------------------HHHHHHHhCCCccccc------cCCccHHHHHHHcChHHHHHHHHHcCCCC-CcccCCCC
Confidence 8899999988665322 26799999999999999999999999998 99999999
Q ss_pred cH-HHHHHHcCcHHHHHHHHhcCCcccceeeeccCCCCchhhHhhcCCCCCCCccc
Q 046389 290 TM-FHIAVLNHQVKILELINEMGSMKDRIVSRRDYGGNNILHMAGMQPSNEGPNVV 344 (558)
Q Consensus 290 t~-Lh~A~~~~~~~iv~~Ll~~ga~~~~~in~~d~~g~TpLh~A~~~~~~~~~~~l 344 (558)
|| ||+|+.+|+.+++++|+++|++ ++.+| +.|+..++.+++++|
T Consensus 196 t~~L~~A~~~~~~~~v~~Ll~~gad----~~~~~-------~~a~~~~~~~iv~~L 240 (285)
T 3kea_A 196 IPDIKLAIDNKDIEMLQALFKYDIN----IYSAN-------LENVLLDDAEIAKMI 240 (285)
T ss_dssp CTTHHHHHHHTCHHHHHHHTTSCBC----STTTT-------GGGGTTTCHHHHHHH
T ss_pred ChHHHHHHHcCCHHHHHHHHHcCCC----CCCCC-------hhhhhcCCHHHHHHH
Confidence 98 9999999999999999999999 55666 467778887666655
No 38
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=2.6e-35 Score=276.89 Aligned_cols=222 Identities=13% Similarity=0.122 Sum_probs=140.8
Q ss_pred CCCCchHHHHHHHCCCHHHHHHHhcCCC---cccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHH
Q 046389 40 SKLGETALHVAASAGRIDFVKNLLGYSP---QVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPI 116 (558)
Q Consensus 40 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~---~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpL 116 (558)
|.+|.||||+|+..|+.+++++|++... .+++.+|..|.||||+|+..|+.+++++|+++|+++ ...+ ..|.|||
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L 82 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRD-FRGNTPL 82 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCC-TTCCCHH
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcC-CCCCCHH
Confidence 4455555555555555555555555311 245555555555555555555555555555555554 2333 4555555
Q ss_pred HHHHHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhh
Q 046389 117 HAGAMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLA 196 (558)
Q Consensus 117 h~A~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~ 196 (558)
|+|+..|+.+++++|++.++.. ......+..+..|.||||+|+..|+.
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~---------------------------~~~~~~~~~~~~g~t~L~~A~~~~~~----- 130 (236)
T 1ikn_D 83 HLACEQGCLASVGVLTQSCTTP---------------------------HLHSILKATNYNGHTCLHLASIHGYL----- 130 (236)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTT---------------------------SSSCGGGCCCTTCCCHHHHHHHTTCH-----
T ss_pred HHHHHcCCHHHHHHHHhcccch---------------------------hHHHHhhccCCCCCCHHHHHHHcCCH-----
Confidence 5555555555555555555310 00112233445555555555555443
Q ss_pred hhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhcc-CCchHHHHHHhcChHHHHHHHHH
Q 046389 197 NQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIE-RPFQLTFVAAEKGNIEFLRVLIR 275 (558)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~-~g~tpLh~Aa~~g~~~iv~~Ll~ 275 (558)
+++++|++.+++++..+ . .|.||||+|+..|+.+++++|++
T Consensus 131 ---------------------------------~~v~~Ll~~g~~~~~~~-----~~~g~tpL~~A~~~~~~~~v~~Ll~ 172 (236)
T 1ikn_D 131 ---------------------------------GIVELLVSLGADVNAQE-----PCNGRTALHLAVDLQNPDLVSLLLK 172 (236)
T ss_dssp ---------------------------------HHHHHHHHHTCCTTCCC-----TTTCCCHHHHHHHTTCHHHHHHHHT
T ss_pred ---------------------------------HHHHHHHHcCCCCCCCC-----CCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 45555555554444332 3 67899999999999999999999
Q ss_pred hCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcCCcccceeeeccCCCCchhhHhhcCC
Q 046389 276 EYPYIISKHDDMGRTMFHIAVLNHQVKILELINEMGSMKDRIVSRRDYGGNNILHMAGMQP 336 (558)
Q Consensus 276 ~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~~~~~in~~d~~g~TpLh~A~~~~ 336 (558)
+|+++ +.+|..|+||||+|+.+|+.+++++|+++|++.. ...++.+|.||.+.+....
T Consensus 173 ~ga~~-~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~--~~~~~~~~~~~~~~~~~~~ 230 (236)
T 1ikn_D 173 CGADV-NRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL--QMLPESEDEESYDTESEFT 230 (236)
T ss_dssp TTCCS-CCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG--SSCCCCCTTTCCCCC----
T ss_pred cCCCC-CcccCCCCCHHHHHHccCchHHHHHHHHcchhhh--hcCCccchHHHHhhhcccc
Confidence 99998 9999999999999999999999999999999854 5689999999999887654
No 39
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=6.3e-35 Score=271.70 Aligned_cols=208 Identities=15% Similarity=0.059 Sum_probs=179.9
Q ss_pred CCHHHHHHHhcCCCccccc-ccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHH
Q 046389 54 GRIDFVKNLLGYSPQVLKL-TDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLY 132 (558)
Q Consensus 54 g~~~~v~~Ll~~~~~~~~~-~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll 132 (558)
|+.+++++|++. +.+++. .|.+|.||||+|+..|+.+++++|+++|+++ ...+ ..|.||||+|+..|+.+++++|+
T Consensus 2 g~~~~i~~Ll~~-g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll 78 (223)
T 2f8y_A 2 DAPAVISDFIYQ-GASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA-NIQD-NMGRTPLHAAVSADAQGVFQILI 78 (223)
T ss_dssp ---CCEETTEET-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CcHHHHHHHHHc-CCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCC-CCcC-CCCCCHHHHHHHcCCHHHHHHHH
Confidence 678889999998 666655 4889999999999999999999999999986 4566 79999999999999999999888
Q ss_pred hcCccccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccc
Q 046389 133 SITEGQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSAN 212 (558)
Q Consensus 133 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (558)
+.++ ..++.++..|.||||+|+..++.
T Consensus 79 ~~~~--------------------------------~~~~~~~~~g~t~L~~A~~~~~~--------------------- 105 (223)
T 2f8y_A 79 RNRA--------------------------------TDLDARMHDGTTPLILAARLAVE--------------------- 105 (223)
T ss_dssp HBTT--------------------------------SCTTCCCTTCCCHHHHHHHHTCH---------------------
T ss_pred HcCC--------------------------------CCcccCCCCCCcHHHHHHHhCcH---------------------
Confidence 7763 34456788899999999887765
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCcccccccCCCCcHH
Q 046389 213 VGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYIISKHDDMGRTMF 292 (558)
Q Consensus 213 ~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L 292 (558)
+++++|++.+.+++.. +..|.||||+|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus 106 -----------------~~~~~Ll~~g~~~~~~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L 162 (223)
T 2f8y_A 106 -----------------GMLEDLINSHADVNAV-----DDLGKSALHWAAAVNNVDAAVVLLKNGANK-DMQNNREETPL 162 (223)
T ss_dssp -----------------HHHHHHHHTTCCTTCB-----CTTSCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHH
T ss_pred -----------------HHHHHHHHcCCCCcCc-----CCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCcCHH
Confidence 8888999888776544 467899999999999999999999999998 89999999999
Q ss_pred HHHHHcCcHHHHHHHHhcCCcccceeeeccCCCCchhhHhhcCCCCCCCccc
Q 046389 293 HIAVLNHQVKILELINEMGSMKDRIVSRRDYGGNNILHMAGMQPSNEGPNVV 344 (558)
Q Consensus 293 h~A~~~~~~~iv~~Ll~~ga~~~~~in~~d~~g~TpLh~A~~~~~~~~~~~l 344 (558)
|+|+.+|+.+++++|+++|++ ++.+|..|+||||+|+..++.+++++|
T Consensus 163 ~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~~~~i~~~L 210 (223)
T 2f8y_A 163 FLAAREGSYETAKVLLDHFAN----RDITDHMDRLPRDIAQERMHHDIVRLL 210 (223)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC----TTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCC----CccccccCCCHHHHHHHhcchHHHHHH
Confidence 999999999999999999999 678999999999999999997766655
No 40
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.1e-33 Score=264.27 Aligned_cols=229 Identities=18% Similarity=0.151 Sum_probs=198.9
Q ss_pred ccccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccc-cccCCCCcHh
Q 046389 3 CEEKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLK-LTDYFGQTAL 81 (558)
Q Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~-~~d~~g~TpL 81 (558)
..|..|.|+|+.|+..|+.+++++|++. +.+++.. +..|.||||+|+..|+.+++++|++. +.+++ ..+..|.|||
T Consensus 4 ~~d~~~~~~l~~A~~~g~~~~~~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~t~L 80 (240)
T 3eu9_A 4 HIDDYSTWDIVKATQYGIYERCRELVEA-GYDVRQP-DKENVTLLHWAAINNRIDLVKYYISK-GAIVDQLGGDLNSTPL 80 (240)
T ss_dssp CCSCGGGCCHHHHHHTTCHHHHHHHHHT-TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBTTTTBCHH
T ss_pred ccccccchHHHHHHHcCChHHHHHHHHc-CCCcCCC-CCCCCCHHHHHHHhCCHHHHHHHHHc-CCcchhhcCCcCCChh
Confidence 4578899999999999999999988876 5677776 88999999999999999999999998 55555 4455699999
Q ss_pred HHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhcc-HHH
Q 046389 82 SLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDL-YEV 159 (558)
Q Consensus 82 h~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~-~~~ 159 (558)
|+|+..|+.+++++|+++|+++ ...+ ..|.||||+|+..|+.+++++|+++++ .+..+..|.||||.|+..++ .++
T Consensus 81 ~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 158 (240)
T 3eu9_A 81 HWATRQGHLSMVVQLMKYGADP-SLID-GEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDP 158 (240)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTT
T ss_pred HHHHHcCCHHHHHHHHHcCCCC-cccC-CCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHH
Confidence 9999999999999999999987 4556 799999999999999999999999998 66788899999999997776 677
Q ss_pred HHHHHhhCCcccccccC-CCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHH
Q 046389 160 ALRLFKDHPQLATLRDS-NEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKE 238 (558)
Q Consensus 160 ~~~Ll~~~~~~~~~~d~-~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~ 238 (558)
++.|++. +.+++..+. .|.||||+|+..++. +++++|++.
T Consensus 159 ~~~L~~~-~~~~~~~~~~~g~t~L~~A~~~~~~--------------------------------------~~v~~Ll~~ 199 (240)
T 3eu9_A 159 TRLLLTF-NVSVNLGDKYHKNTALHWAVLAGNT--------------------------------------TVISLLLEA 199 (240)
T ss_dssp HHHHHHT-TCCTTCCCTTTCCCHHHHHHHHTCH--------------------------------------HHHHHHHHH
T ss_pred HHHHHhc-CCCcchhhccCCCcHHHHHHHcCCH--------------------------------------HHHHHHHHc
Confidence 7777776 667777776 899999999988875 899999999
Q ss_pred hhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCcc
Q 046389 239 VIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYI 280 (558)
Q Consensus 239 ~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~ 280 (558)
+++++.. +..|.||||+|++.|+.+++++|++++++.
T Consensus 200 g~~~~~~-----~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 200 GANVDAQ-----NIKGESALDLAKQRKNVWMINHLQEARQAK 236 (240)
T ss_dssp TCCTTCB-----CTTSCBHHHHHHHTTCHHHHHHHHHHC---
T ss_pred CCCCCCc-----CCCCCCHHHHHHHcCcHHHHHHHHHhhhcc
Confidence 8877654 478899999999999999999999998765
No 41
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2.4e-33 Score=262.71 Aligned_cols=207 Identities=14% Similarity=0.107 Sum_probs=146.4
Q ss_pred CCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccc----cccCCCCCccHHH
Q 046389 42 LGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLA----LDRESVDQYLPIH 117 (558)
Q Consensus 42 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~----~~~~~~~g~tpLh 117 (558)
.|+||||.|+..|+.+++++|++..+.+++.+|..|.||||+|+..|+.+++++|+++|+++. ...+ ..|.||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~-~~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSEL-YEGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTT-TTTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccC-CCCcCHHH
Confidence 478999999999999999999987688899999999999999999999999999999988753 2234 68899999
Q ss_pred HHHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhh
Q 046389 118 AGAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLA 196 (558)
Q Consensus 118 ~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~ 196 (558)
+|+..|+.+++++|+++++ .+..+... .+ ....+..|..|.||||+|+..|+.
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~--~~-------------------~~~~~~~~~~g~t~L~~A~~~~~~----- 134 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARGASVSARATGS--VF-------------------HYRPHNLIYYGEHPLSFAACVGSE----- 134 (232)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCSG--GG-------------------SCCTTCSCCCCSSHHHHHHHHTCH-----
T ss_pred HHHHcCCHHHHHHHHhCCCCCCcccCCc--ce-------------------eecccccccCCCCHHHHHHHcCCH-----
Confidence 9999999999999998876 11111111 00 011233455667777766665554
Q ss_pred hhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHH----HH
Q 046389 197 NQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFL----RV 272 (558)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv----~~ 272 (558)
+++++|++.|++++.. |..|.||||+|+..|+.+++ ++
T Consensus 135 ---------------------------------~~v~~Ll~~ga~~~~~-----d~~g~t~L~~A~~~~~~~~~~~i~~~ 176 (232)
T 2rfa_A 135 ---------------------------------EIVRLLIEHGADIRAQ-----DSLGNTVLHILILQPNKTFACQMYNL 176 (232)
T ss_dssp ---------------------------------HHHHHHHHTTCCTTCC-----CTTSCCHHHHHHTCSCHHHHHHHHHH
T ss_pred ---------------------------------HHHHHHHHCCCCCCCC-----CCCCCCHHHHHHHcCChHHHHHHHHH
Confidence 6666666666555433 35667777777777776666 66
Q ss_pred HHHhCCccc-----ccccCCCCcHHHHHHHcCcHHHHHHHHhcCCc
Q 046389 273 LIREYPYII-----SKHDDMGRTMFHIAVLNHQVKILELINEMGSM 313 (558)
Q Consensus 273 Ll~~~~~~~-----~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~ 313 (558)
|+++|++.. +.+|..|+||||+|+.+|+.+++++|+++|++
T Consensus 177 Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~ 222 (232)
T 2rfa_A 177 LLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKH 222 (232)
T ss_dssp HHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 666666542 45666677777777777777777777776655
No 42
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.2e-34 Score=272.27 Aligned_cols=219 Identities=14% Similarity=0.084 Sum_probs=170.6
Q ss_pred ccccCCCCcHhHHHHHcCCHHHHHHHHHcCccc---ccccCCCCCccHHHHHHHcCChHHHHHHHhcCc-cccCccchhH
Q 046389 71 KLTDYFGQTALSLAAASGNLDLVQLMTEDNEHL---ALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDLIE 146 (558)
Q Consensus 71 ~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~---~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t 146 (558)
+.+|.+|.||||+|+..|+.++++.|++.+... .+..+ ..|.||||+|+..|+.+++++|+++|+ .+..+..|.|
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 80 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQN-NLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNT 80 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCC-TTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCC
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence 357899999999999999999999999987631 24566 899999999999999999999999987 4445556666
Q ss_pred HHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHH
Q 046389 147 LLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLE 226 (558)
Q Consensus 147 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~ 226 (558)
|||.|+..++.++++.|++.
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~------------------------------------------------------------ 100 (236)
T 1ikn_D 81 PLHLACEQGCLASVGVLTQS------------------------------------------------------------ 100 (236)
T ss_dssp HHHHHHHHTCHHHHHHHHHS------------------------------------------------------------
T ss_pred HHHHHHHcCCHHHHHHHHhc------------------------------------------------------------
Confidence 66666666666666666554
Q ss_pred HHHHHHHHHHHHhhccch-hhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCcccccccC-CCCcHHHHHHHcCcHHHH
Q 046389 227 QAITLVEIIWKEVIRSQD-SEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYIISKHDD-MGRTMFHIAVLNHQVKIL 304 (558)
Q Consensus 227 ~~~~~v~~l~~~~~~~~~-~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~-~g~t~Lh~A~~~~~~~iv 304 (558)
+.+... ...+..+..|.||||+|+..|+.+++++|+++|+++ +.+|. .|+||||+|+..|+.+++
T Consensus 101 ------------~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A~~~~~~~~v 167 (236)
T 1ikn_D 101 ------------CTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADV-NAQEPCNGRTALHLAVDLQNPDLV 167 (236)
T ss_dssp ------------TTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHHHH
T ss_pred ------------ccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCCHHHHHHHcCCHHHH
Confidence 322111 112334567899999999999999999999999999 88887 999999999999999999
Q ss_pred HHHHhcCCcccceeeeccCCCCchhhHhhcCCCCCCCccccchHHHHHHHHHHHHHHHhhcCCcchh--hccCCCCChhh
Q 046389 305 ELINEMGSMKDRIVSRRDYGGNNILHMAGMQPSNEGPNVVFGAVLQLQQEVLWFKKVSEIVRPVDAE--ARNYGLQTPRE 382 (558)
Q Consensus 305 ~~Ll~~ga~~~~~in~~d~~g~TpLh~A~~~~~~~~~~~l~~~~l~~~~~~~~~~~v~~l~~~~~~~--~~n~~g~tpl~ 382 (558)
++|+++|++ ++.+|..|+||||+|+..++.+++++| +..|++.. .++.+|.||.+
T Consensus 168 ~~Ll~~ga~----~~~~~~~g~tpl~~A~~~~~~~~~~~L-------------------l~~ga~~~~~~~~~~~~~~~~ 224 (236)
T 1ikn_D 168 SLLLKCGAD----VNRVTYQGYSPYQLTWGRPSTRIQQQL-------------------GQLTLENLQMLPESEDEESYD 224 (236)
T ss_dssp HHHHTTTCC----SCCCCTTCCCGGGGCTTSSCHHHHHHH-------------------HTTSCGGGSSCCCCCTTTCCC
T ss_pred HHHHHcCCC----CCcccCCCCCHHHHHHccCchHHHHHH-------------------HHcchhhhhcCCccchHHHHh
Confidence 999999999 779999999999999999987655544 33677665 78999999998
Q ss_pred hhHH
Q 046389 383 LFTQ 386 (558)
Q Consensus 383 ~a~~ 386 (558)
...+
T Consensus 225 ~~~~ 228 (236)
T 1ikn_D 225 TESE 228 (236)
T ss_dssp CC--
T ss_pred hhcc
Confidence 7653
No 43
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=1.2e-32 Score=251.79 Aligned_cols=198 Identities=18% Similarity=0.179 Sum_probs=120.5
Q ss_pred CCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHH
Q 046389 7 STLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAA 86 (558)
Q Consensus 7 ~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~ 86 (558)
.+.||||.|+..|+.+.++.++.+.+.+++.. |.+|.||||+|+..|+.+++++|++. +++++.+|..|.||||+|+.
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~ 81 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDTTYQVDEV-DTEGNTPLNIAVHNNDIEIAKALIDR-GADINLQNSISDSPYLYAGA 81 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHH
T ss_pred ccccHHHHHHHhccHHHHHHHHHcCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHH
Confidence 34555555555555555555555544445444 55555555555555555555555555 55555555555555555555
Q ss_pred cCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhh
Q 046389 87 SGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKD 166 (558)
Q Consensus 87 ~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 166 (558)
.|+.+++++|++.+.......+ ..|.||||+|+..|+.+++++|++.+
T Consensus 82 ~~~~~~~~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g------------------------------- 129 (201)
T 3hra_A 82 QGRTEILAYMLKHATPDLNKHN-RYGGNALIPAAEKGHIDNVKLLLEDG------------------------------- 129 (201)
T ss_dssp TTCHHHHHHHHHHSCCCTTCCC-TTSCCSHHHHHHTTCHHHHHHHHHHC-------------------------------
T ss_pred cCCHHHHHHHHhccCccccccc-CCCCcHHHHHHHcCCHHHHHHHHHcC-------------------------------
Confidence 5555555555533322123333 45555555555555555555554443
Q ss_pred CCcccccccCCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhh
Q 046389 167 HPQLATLRDSNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSE 246 (558)
Q Consensus 167 ~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~ 246 (558)
+.+++.+|..|.||||+|+..++.
T Consensus 130 -~~~~~~~~~~g~t~L~~A~~~~~~------------------------------------------------------- 153 (201)
T 3hra_A 130 -REDIDFQNDFGYTALIEAVGLREG------------------------------------------------------- 153 (201)
T ss_dssp -CCCTTCCCTTSCCHHHHHHHSSCC-------------------------------------------------------
T ss_pred -CCCcCCCCCCCCCHHHHHHHhccc-------------------------------------------------------
Confidence 234455555555555555544421
Q ss_pred hhhhccCCchHHHHHHhcChHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcC
Q 046389 247 ISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYIISKHDDMGRTMFHIAVLNHQVKILELINEMG 311 (558)
Q Consensus 247 ~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g 311 (558)
..++.+++++|+++|+++ +.+|..|+||||+|+.+|+.+++++|+++|
T Consensus 154 ----------------~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 154 ----------------NQLYQDIVKLLMENGADQ-SIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp ----------------SHHHHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred ----------------hhhHHHHHHHHHHCCCCC-CccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 012378999999999998 889999999999999999999999999876
No 44
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=5.8e-33 Score=260.06 Aligned_cols=205 Identities=22% Similarity=0.192 Sum_probs=169.8
Q ss_pred CCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCccc-----ccccCCCCcHh
Q 046389 7 STLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVL-----KLTDYFGQTAL 81 (558)
Q Consensus 7 ~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~-----~~~d~~g~TpL 81 (558)
.|+||||.|+..|+.+.++.|++..+.+++.. |..|+||||+|+..|+.+++++|++. +.++ +.+|..|.|||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~g~t~L 79 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQR-GAMGETALHIAALYDNLEAAMVLMEA-APELVFEPMTSELYEGQTAL 79 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHH-CGGGGGCCCCSTTTTTCCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccC-CCCCCCHHHHHHHcCCHHHHHHHHHc-CchhccccccccCCCCcCHH
Confidence 58999999999999999999999878888887 89999999999999999999999998 5554 67788999999
Q ss_pred HHHHHcCCHHHHHHHHHcCcccccccC-----------CCCCccHHHHHHHcCChHHHHHHHhcCccccCccchhHHHHH
Q 046389 82 SLAAASGNLDLVQLMTEDNEHLALDRE-----------SVDQYLPIHAGAMSGHKEVVLYLYSITEGQLDNKDLIELLII 150 (558)
Q Consensus 82 h~A~~~g~~eiv~~Ll~~~~~~~~~~~-----------~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~ 150 (558)
|+|+..|+.+++++|+++|++++.... +..|.||||+|+..|+.+++++|+++|+
T Consensus 80 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga-------------- 145 (232)
T 2rfa_A 80 HIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGA-------------- 145 (232)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTC--------------
T ss_pred HHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCC--------------
Confidence 999999999999999999998743221 0257777777777777777777766654
Q ss_pred HHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHH
Q 046389 151 LIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAIT 230 (558)
Q Consensus 151 a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~ 230 (558)
+++.+|.+|.||||+|+..++. ....+
T Consensus 146 -------------------~~~~~d~~g~t~L~~A~~~~~~----------------------------------~~~~~ 172 (232)
T 2rfa_A 146 -------------------DIRAQDSLGNTVLHILILQPNK----------------------------------TFACQ 172 (232)
T ss_dssp -------------------CTTCCCTTSCCHHHHHHTCSCH----------------------------------HHHHH
T ss_pred -------------------CCCCCCCCCCCHHHHHHHcCCh----------------------------------HHHHH
Confidence 5567788899999999988875 22235
Q ss_pred HHHHHHHHhhccchhhh-hhhccCCchHHHHHHhcChHHHHHHHHHhCCcc
Q 046389 231 LVEIIWKEVIRSQDSEI-STLIERPFQLTFVAAEKGNIEFLRVLIREYPYI 280 (558)
Q Consensus 231 ~v~~l~~~~~~~~~~~~-~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~ 280 (558)
++++|++.+.+...... +..+..|.||||+|++.|+.+++++|+++|++.
T Consensus 173 i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~ 223 (232)
T 2rfa_A 173 MYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHI 223 (232)
T ss_dssp HHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 56888888876653333 356788999999999999999999999998776
No 45
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=4.1e-35 Score=289.07 Aligned_cols=262 Identities=10% Similarity=-0.065 Sum_probs=200.1
Q ss_pred CCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccc---------------
Q 046389 42 LGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALD--------------- 106 (558)
Q Consensus 42 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~--------------- 106 (558)
...+|+| ....++|++|++. |++++.+|..|.|+++ |+.++++.|+++|.++...
T Consensus 22 ~~~~~~~----~~~~dlv~~ll~~-ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~ 91 (327)
T 1sw6_A 22 RTAGPII----TFTHDLTSDFLSS-PLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNS 91 (327)
T ss_dssp ---CCEE----ECCTTCCCSTTTS-SCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------
T ss_pred ccccchh----hhcCchHHHHhhC-CcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccc
Confidence 4456666 3566889999998 9999999999999988 9999999999999775320
Q ss_pred -cCCCCCccHHHHHHHcCChHHHHHHHhcCc-ccc-CccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHH
Q 046389 107 -RESVDQYLPIHAGAMSGHKEVVLYLYSITE-GQL-DNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALH 183 (558)
Q Consensus 107 -~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~-~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~ 183 (558)
.. ....+.+|.|+..+..+++++|++.++ .+. .+..|.||||+|+..|+.++++.|+++ +.+++.+|.+|+||||
T Consensus 92 ~~~-~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~-Gad~n~~d~~g~TpLh 169 (327)
T 1sw6_A 92 EGG-SSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKH-GSNRLYGDNMGESCLV 169 (327)
T ss_dssp -------------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTBCCTTCCCHHH
T ss_pred ccc-CCccchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHH
Confidence 01 122234688898899999999999988 666 799999999999999999999999998 7888999999999999
Q ss_pred HHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHh
Q 046389 184 ALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAE 263 (558)
Q Consensus 184 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~ 263 (558)
+|+..|+. ...+.++.|++.+.. +.+..+..|.||||+|+.
T Consensus 170 ~A~~~g~~-----------------------------------~~~~~~~~ll~~~~~----~~~~~d~~g~tpLh~A~~ 210 (327)
T 1sw6_A 170 KAVKSVNN-----------------------------------YDSGTFEALLDYLYP----CLILEDSMNRTILHHIII 210 (327)
T ss_dssp HHHHSSHH-----------------------------------HHTTCHHHHHHHHGG----GGGEECTTCCCHHHHHHH
T ss_pred HHHHhccc-----------------------------------ccHHHHHHHHHhhhc----cccCCCCCCCCHHHHHHH
Confidence 99998861 112455566665532 234566889999999999
Q ss_pred ----cChHHHHHHHHHh--------------------CCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcCCcccceee
Q 046389 264 ----KGNIEFLRVLIRE--------------------YPYIISKHDDMGRTMFHIAVLNHQVKILELINEMGSMKDRIVS 319 (558)
Q Consensus 264 ----~g~~~iv~~Ll~~--------------------~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~~~~~in 319 (558)
.|+.+++++|++. ++++ +.+|..|+||||.|+. +++|++++ +|
T Consensus 211 ~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~-~~~~~~g~t~L~~a~~------~~~Ll~~~------~n 277 (327)
T 1sw6_A 211 TSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKP-NDKNGERKDSILENLD------LKWIIANM------LN 277 (327)
T ss_dssp HHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----------------CHHHHHCS------HHHHHHHT------TT
T ss_pred HccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCc-ccccccCCChhHHHHH------HHHHHHhC------CC
Confidence 8999999999988 7777 8899999999999996 89999983 66
Q ss_pred eccCCCCchhhHhhcCCCCCCCccccchHHHHHHHHHHHHHHHhhcCCcchhhccCCCCChhhhhHH
Q 046389 320 RRDYGGNNILHMAGMQPSNEGPNVVFGAVLQLQQEVLWFKKVSEIVRPVDAEARNYGLQTPRELFTQ 386 (558)
Q Consensus 320 ~~d~~g~TpLh~A~~~~~~~~~~~l~~~~l~~~~~~~~~~~v~~l~~~~~~~~~n~~g~tpl~~a~~ 386 (558)
.+|..|+||||+|+..|+.+++++| +..|++++.+|.+|+||+|+|.+
T Consensus 278 ~~d~~G~TpLh~A~~~g~~~~v~~L-------------------l~~Gad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 278 AQDSNGDTCLNIAARLGNISIVDAL-------------------LDYGADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp CCCTTSCCHHHHHHHHCCHHHHHHH-------------------HHTTCCTTCCCTTSCCGGGGTCC
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHH-------------------HHcCCCCcccCCCCCCHHHHHHh
Confidence 8999999999999999997655544 34899999999999999999864
No 46
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=6.6e-32 Score=246.91 Aligned_cols=130 Identities=18% Similarity=0.244 Sum_probs=114.8
Q ss_pred cccccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHh
Q 046389 2 TCEEKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTAL 81 (558)
Q Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpL 81 (558)
+..|.+|+||||+|+..|+.++++.|++. +.+++.. +..|.||||+|+..|+.+++++|++..+.+++.+|..|.|||
T Consensus 33 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L 110 (201)
T 3hra_A 33 DEVDTEGNTPLNIAVHNNDIEIAKALIDR-GADINLQ-NSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNAL 110 (201)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHH
Confidence 35678999999999999999999988876 7778877 889999999999999999999999765889999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcC-cccccccCCCCCccHHHHHHHcCC-----hHHHHHHHhcC
Q 046389 82 SLAAASGNLDLVQLMTEDN-EHLALDRESVDQYLPIHAGAMSGH-----KEVVLYLYSIT 135 (558)
Q Consensus 82 h~A~~~g~~eiv~~Ll~~~-~~~~~~~~~~~g~tpLh~A~~~g~-----~~~v~~Ll~~~ 135 (558)
|+|+..|+.+++++|+++| +++ ...+ ..|.||||+|+..++ .+++++|+++|
T Consensus 111 ~~A~~~~~~~~v~~Ll~~g~~~~-~~~~-~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~g 168 (201)
T 3hra_A 111 IPAAEKGHIDNVKLLLEDGREDI-DFQN-DFGYTALIEAVGLREGNQLYQDIVKLLMENG 168 (201)
T ss_dssp HHHHHTTCHHHHHHHHHHCCCCT-TCCC-TTSCCHHHHHHHSSCCSHHHHHHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHHcCCCCc-CCCC-CCCCCHHHHHHHhccchhhHHHHHHHHHHCC
Confidence 9999999999999999999 664 5666 899999999999887 66666665544
No 47
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.98 E-value=1.8e-32 Score=263.43 Aligned_cols=156 Identities=24% Similarity=0.273 Sum_probs=97.8
Q ss_pred cccccCCcHHHHHHHHcCCHHHHHHHHhh---Cchhhh---hhcCCCCchHHHHHHHC---CCHHHHHHHhcCCCcc---
Q 046389 2 TCEEKSTLSKLYRAALDDDWQTAETIFES---HEDYVK---ASLSKLGETALHVAASA---GRIDFVKNLLGYSPQV--- 69 (558)
Q Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~ll~~---~~~~~~---~~~~~~g~t~Lh~Aa~~---g~~~~v~~Ll~~~~~~--- 69 (558)
+..|.+|+||||.|+..|+.+.++.|++. .+..++ ...+..|.||||+|+.. |+.++|++|++. +++
T Consensus 7 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~-ga~~~~ 85 (273)
T 2pnn_A 7 KPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDV-ARKTDS 85 (273)
T ss_dssp ----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHH-HHHTTC
T ss_pred CCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHh-hccccc
Confidence 34567777777777777777777766653 233332 12256777777777765 777777777775 332
Q ss_pred ----ccc----ccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCC--------------CCccHHHHHHHcCChHH
Q 046389 70 ----LKL----TDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESV--------------DQYLPIHAGAMSGHKEV 127 (558)
Q Consensus 70 ----~~~----~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~--------------~g~tpLh~A~~~g~~~~ 127 (558)
++. +|..|.||||+|+..|+.+++++|+++|++++ ..+ . .|.||||+|+..|+.++
T Consensus 86 ~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~-~~~-~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~ 163 (273)
T 2pnn_A 86 LKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQ-AAA-NGDFFKKTKGRPGFYFGELPLSLAACTNQLAI 163 (273)
T ss_dssp HHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCB-CSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHH
T ss_pred hhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC-ccc-cccccccccccccccCCCCHHHHHHHcCCHHH
Confidence 222 45567777777777777777777777777753 233 2 46666666666666666
Q ss_pred HHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCC
Q 046389 128 VLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSM 190 (558)
Q Consensus 128 v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~ 190 (558)
+++|++.+. .+.+++.+|.+|+||||+|+..++
T Consensus 164 v~~Ll~~~~------------------------------~gad~~~~d~~g~tpLh~A~~~~~ 196 (273)
T 2pnn_A 164 VKFLLQNSW------------------------------QPADISARDSVGNTVLHALVEVAD 196 (273)
T ss_dssp HHHHHHCSS------------------------------CCCCTTCCCTTSCCHHHHHHHHCC
T ss_pred HHHHHhccc------------------------------CCCCceeeCCCCCcHHHHHHHccC
Confidence 666655210 245666778888888888877654
No 48
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=2.9e-32 Score=259.39 Aligned_cols=93 Identities=14% Similarity=0.057 Sum_probs=77.4
Q ss_pred CCchHHHHHHHCCCHH----HHHHHhcCCCccccc----ccCCCCcHhHHHHHc---CCHHHHHHHHHcCcccccc----
Q 046389 42 LGETALHVAASAGRID----FVKNLLGYSPQVLKL----TDYFGQTALSLAAAS---GNLDLVQLMTEDNEHLALD---- 106 (558)
Q Consensus 42 ~g~t~Lh~Aa~~g~~~----~v~~Ll~~~~~~~~~----~d~~g~TpLh~A~~~---g~~eiv~~Ll~~~~~~~~~---- 106 (558)
.|+||||.|+..|+.+ ++++|++. +.+++. +|..|.||||+|+.. |+.+++++|+++|++.+..
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~-g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 79 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWN-SKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLV 79 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHH-TCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHc-CCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhc
Confidence 4789999999999987 45566666 788887 899999999999998 9999999999998876422
Q ss_pred ------cCCCCCccHHHHHHHcCChHHHHHHHhcCc
Q 046389 107 ------RESVDQYLPIHAGAMSGHKEVVLYLYSITE 136 (558)
Q Consensus 107 ------~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 136 (558)
.+ ..|.||||+|+..|+.+++++|+++|+
T Consensus 80 ~~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~ga 114 (256)
T 2etb_A 80 NAQCTDEF-YQGHSALHIAIEKRSLQCVKLLVENGA 114 (256)
T ss_dssp GCCCCSTT-TTTCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cccccccc-ccCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 23 579999999999999999999998876
No 49
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=5.8e-31 Score=232.16 Aligned_cols=158 Identities=28% Similarity=0.358 Sum_probs=133.3
Q ss_pred hHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCC
Q 046389 45 TALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGH 124 (558)
Q Consensus 45 t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~ 124 (558)
++|+.||+.|+.++|+.|++. |+++|.+|.+|.||||+|+..++.+++++|+++|+++ ..++ ..|+||||+|+..|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~-Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d-~~g~TpLh~A~~~g~ 82 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIEN-GADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKD-SDGRTPLHHAAENGH 82 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhc-cCCCCHHHHHHHcCC
Confidence 579999999999999999998 8999999999999999999999999999999999987 4566 789999999999999
Q ss_pred hHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhcccchh
Q 046389 125 KEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQNQQGML 204 (558)
Q Consensus 125 ~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~ 204 (558)
.++|++|+++|+ +++.+|
T Consensus 83 ~~~v~~Ll~~ga---------------------------------dvn~~d----------------------------- 100 (169)
T 4gpm_A 83 KEVVKLLISKGA---------------------------------DVNAKD----------------------------- 100 (169)
T ss_dssp HHHHHHHHHTTC---------------------------------CTTCCC-----------------------------
T ss_pred HHHHHHHHHCcC---------------------------------CCCCCC-----------------------------
Confidence 999888887764 222222
Q ss_pred hhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCcccccc
Q 046389 205 QNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYIISKH 284 (558)
Q Consensus 205 ~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~ 284 (558)
.+|.||||+|+..|+.+++++|+++|+++ +.+
T Consensus 101 -----------------------------------------------~~G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~ 132 (169)
T 4gpm_A 101 -----------------------------------------------SDGRTPLHHAAENGHKEVVKLLISKGADV-NTS 132 (169)
T ss_dssp -----------------------------------------------TTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCC
T ss_pred -----------------------------------------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCc-ccc
Confidence 34567777888888889999999999998 899
Q ss_pred cCCCCcHHHHHHHcCcHHHHHHHHhcCCccc
Q 046389 285 DDMGRTMFHIAVLNHQVKILELINEMGSMKD 315 (558)
Q Consensus 285 d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~~~ 315 (558)
|.+|+||||+|+.+|+.+++++|+++|++.+
T Consensus 133 d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 133 DSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHTC-----
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 9999999999999999999999999999854
No 50
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=3.1e-32 Score=261.81 Aligned_cols=92 Identities=16% Similarity=0.112 Sum_probs=81.6
Q ss_pred cCCchHHHHHHhcChHHHHHHHHH---hCCcccccccCCCCcHHHHHHHcCc---------HHHHHHHHhcCCcccc---
Q 046389 252 ERPFQLTFVAAEKGNIEFLRVLIR---EYPYIISKHDDMGRTMFHIAVLNHQ---------VKILELINEMGSMKDR--- 316 (558)
Q Consensus 252 ~~g~tpLh~Aa~~g~~~iv~~Ll~---~~~~~~~~~d~~g~t~Lh~A~~~~~---------~~iv~~Ll~~ga~~~~--- 316 (558)
..|.||||+|+..|+.+++++|++ +|+++ +.+|.+|+||||+|+..|+ .+++++|+++|++++.
T Consensus 146 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~-~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~ 224 (273)
T 2pnn_A 146 YFGELPLSLAACTNQLAIVKFLLQNSWQPADI-SARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLK 224 (273)
T ss_dssp CSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhcccCCCCc-eeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccc
Confidence 478999999999999999999999 89998 9999999999999999998 7999999999999431
Q ss_pred eeeeccCCCCchhhHhhcCCCCCCCccc
Q 046389 317 IVSRRDYGGNNILHMAGMQPSNEGPNVV 344 (558)
Q Consensus 317 ~in~~d~~g~TpLh~A~~~~~~~~~~~l 344 (558)
+++.+|..|+||||+|+..|+.+++++|
T Consensus 225 ~~~~~d~~g~TpL~~A~~~g~~~iv~~L 252 (273)
T 2pnn_A 225 LEEITNRKGLTPLALAASSGKIGVLAYI 252 (273)
T ss_dssp GGGCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cccccCCCCCCHHHHHHHhChHHHHHHH
Confidence 0136999999999999999997766655
No 51
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=7.3e-31 Score=249.69 Aligned_cols=181 Identities=19% Similarity=0.190 Sum_probs=155.8
Q ss_pred CCcHHHHHHHHcCCHHHHHHHHh---hCchhhhh---hcCCCCchHHHHHHHC---CCHHHHHHHhcCCCccccc-----
Q 046389 7 STLSKLYRAALDDDWQTAETIFE---SHEDYVKA---SLSKLGETALHVAASA---GRIDFVKNLLGYSPQVLKL----- 72 (558)
Q Consensus 7 ~g~t~L~~A~~~g~~~~v~~ll~---~~~~~~~~---~~~~~g~t~Lh~Aa~~---g~~~~v~~Ll~~~~~~~~~----- 72 (558)
.|+||||.|+..|+.+.++.+++ +.+.+++. ..|..|.||||+|+.. |+.++|++|++. +++++.
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~-g~~~~~~~~~~ 79 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQI-DKDSGNPKPLV 79 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHH-HHHTTCSSCGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhc-CCcccchhhhc
Confidence 48999999999999985543333 34677776 2388999999999999 999999999997 655542
Q ss_pred ------ccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCC-------------CccHHHHHHHcCChHHHHHHHh
Q 046389 73 ------TDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVD-------------QYLPIHAGAMSGHKEVVLYLYS 133 (558)
Q Consensus 73 ------~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~-------------g~tpLh~A~~~g~~~~v~~Ll~ 133 (558)
+|..|.||||+|+..|+.+++++|+++|++++. .+ .. |.||||+|+..|+.+++++|++
T Consensus 80 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~-~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 157 (256)
T 2etb_A 80 NAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHL-RA-CGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLE 157 (256)
T ss_dssp GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CC-CSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHH
T ss_pred ccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cc-ccccccccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 347899999999999999999999999999743 43 33 9999999999999999999999
Q ss_pred ---cCc-cccCccchhHHHHHHHH--hccHH-------HHHHHHhhCCccc-------ccccCCCCcHHHHHhcCCCc
Q 046389 134 ---ITE-GQLDNKDLIELLIILIK--TDLYE-------VALRLFKDHPQLA-------TLRDSNEETALHALAGKSMM 191 (558)
Q Consensus 134 ---~~~-~~~~~~~~~t~l~~a~~--~~~~~-------~~~~Ll~~~~~~~-------~~~d~~g~t~L~~a~~~~~~ 191 (558)
.|+ .+..+..|.||||+|+. .++.+ +++.|++. +.++ +.+|..|.||||+|+..|+.
T Consensus 158 ~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~-ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~ 234 (256)
T 2etb_A 158 NPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQM-GARLCPTVQLEEISNHQGLTPLKLAAKEGKI 234 (256)
T ss_dssp CSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH-HHHHSTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred ccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHc-CCCcccccccccccCCCCCCHHHHHHHhCCH
Confidence 777 67788999999999999 78888 99999998 6667 88999999999999999986
No 52
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=8.1e-30 Score=224.82 Aligned_cols=157 Identities=28% Similarity=0.290 Sum_probs=143.6
Q ss_pred HHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCC
Q 046389 10 SKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGN 89 (558)
Q Consensus 10 t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~ 89 (558)
++|+.||+.|+.++|+.|++. |.+++.+ |.+|+||||+|+..|+.+++++|++. +++++.+|.+|.||||+|+..|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~-Gadvn~~-d~~g~t~l~~a~~~~~~~~~~~ll~~-gad~~~~d~~g~TpLh~A~~~g~ 82 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIEN-GADVNAS-DSDGRTPLHHAAENGHKEVVKLLISK-GADVNAKDSDGRTPLHHAAENGH 82 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT-TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHC-CCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHhc-ccchhhhccCCCCHHHHHHHcCC
Confidence 479999999999999988875 7889888 99999999999999999999999998 99999999999999999999999
Q ss_pred HHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHHHHHhhCC
Q 046389 90 LDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVALRLFKDHP 168 (558)
Q Consensus 90 ~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~ 168 (558)
.+++++|+++|+++ +.++ ..|+||||+|+..|+.++|++|+++|+ .+..+..|.|||++|+..|+.++++.|+++ |
T Consensus 83 ~~~v~~Ll~~gadv-n~~d-~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~-G 159 (169)
T 4gpm_A 83 KEVVKLLISKGADV-NAKD-SDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQ-G 159 (169)
T ss_dssp HHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC--
T ss_pred HHHHHHHHHCcCCC-CCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHC-C
Confidence 99999999999997 4566 899999999999999999999999998 677889999999999999999999999987 5
Q ss_pred cccc
Q 046389 169 QLAT 172 (558)
Q Consensus 169 ~~~~ 172 (558)
++++
T Consensus 160 A~ie 163 (169)
T 4gpm_A 160 GWLE 163 (169)
T ss_dssp ----
T ss_pred CCcC
Confidence 5443
No 53
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=6.1e-31 Score=250.84 Aligned_cols=209 Identities=15% Similarity=0.105 Sum_probs=115.2
Q ss_pred CCCCchHHHHHHHCCCHHHHHHHhc----CCCccccccc----CCCCcHhHHHH---HcCCHHHHHHHHHcCcccc----
Q 046389 40 SKLGETALHVAASAGRIDFVKNLLG----YSPQVLKLTD----YFGQTALSLAA---ASGNLDLVQLMTEDNEHLA---- 104 (558)
Q Consensus 40 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~----~~~~~~~~~d----~~g~TpLh~A~---~~g~~eiv~~Ll~~~~~~~---- 104 (558)
+..|+|+||.|++.|+.+.++.|++ . +.+++..+ ..|.||||+|+ +.|+.+++++|++.|++..
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~ 80 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTH-KKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMRE 80 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHH-TCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhc-CCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHh
Confidence 3456667777777776664444443 4 55555444 55777777776 5577777777777665421
Q ss_pred ------cccCCCCCccHHHHHHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCC
Q 046389 105 ------LDRESVDQYLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSN 177 (558)
Q Consensus 105 ------~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~ 177 (558)
...+ ..|.||||+|+..|+.++|++|+++|+ .+..+..+ +. .+.+....+..
T Consensus 81 ~~~~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~------------------~~--~~~~~~~~~~~ 139 (260)
T 3jxi_A 81 FINSPFRDVY-YRGQTALHIAIERRCKHYVELLVEKGADVHAQARGR------------------FF--QPKDEGGYFYF 139 (260)
T ss_dssp HHTCCBCCSS-EESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEEC------------------CC--SSSCCCCSCCS
T ss_pred hhcccccccc-cCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcccccc------------------cc--CcccccccccC
Confidence 1122 367777777777777777777777665 11111100 00 01111122345
Q ss_pred CCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHH---HhhccchhhhhhhccCC
Q 046389 178 EETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWK---EVIRSQDSEISTLIERP 254 (558)
Q Consensus 178 g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~---~~~~~~~~~~~~~~~~g 254 (558)
|.||||+|+..|+. +++++|++ .+++++.. |..|
T Consensus 140 g~tpL~~A~~~g~~--------------------------------------~~v~~Ll~~~~~ga~~~~~-----d~~g 176 (260)
T 3jxi_A 140 GELPLSLAACTNQP--------------------------------------HIVHYLTENGHKQADLRRQ-----DSRG 176 (260)
T ss_dssp CSSHHHHHHHTTCH--------------------------------------HHHHHHHHCSSCCCCTTCC-----CTTS
T ss_pred CCCHHHHHHHcCCH--------------------------------------HHHHHHHhccccCCCCccc-----CCCC
Confidence 66666666655544 55556665 44444432 2455
Q ss_pred chHHHHHHhcCh---------HHHHHHHHHhCCccc------ccccCCCCcHHHHHHHcCcHHHHHHHHhcCCc
Q 046389 255 FQLTFVAAEKGN---------IEFLRVLIREYPYII------SKHDDMGRTMFHIAVLNHQVKILELINEMGSM 313 (558)
Q Consensus 255 ~tpLh~Aa~~g~---------~~iv~~Ll~~~~~~~------~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~ 313 (558)
.||||+|+..|+ .+++++|+++|+++. +.+|..|+||||+|+.+|+.+++++|+++|++
T Consensus 177 ~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 250 (260)
T 3jxi_A 177 NTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIA 250 (260)
T ss_dssp CCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence 666666665554 456666666655542 34556666666666666666666666666554
No 54
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.97 E-value=2e-31 Score=265.03 Aligned_cols=277 Identities=13% Similarity=0.015 Sum_probs=169.7
Q ss_pred CcHHHHHHHH-cCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCc---ccccccCCCCcHhHH
Q 046389 8 TLSKLYRAAL-DDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQ---VLKLTDYFGQTALSL 83 (558)
Q Consensus 8 g~t~L~~A~~-~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~---~~~~~d~~g~TpLh~ 83 (558)
+.+.+++|.. .++.+.+++++.+ +.+++||||+|++.|+.++|++|++. ++ ..+..|..|.||||+
T Consensus 65 ~ll~~~~a~~~~~~~~~~~~l~~~---------g~~~~T~Lh~Aa~~G~~e~v~~Ll~~-ga~~~~~~~~~~~~~tpL~~ 134 (376)
T 2aja_A 65 QLLCLYYAHYNRNAKQLWSDAHKK---------GIKSEVICFVAAITGCSSALDTLCLL-LTSDEIVKVIQAENYQAFRL 134 (376)
T ss_dssp HHHHHHHHHTTTTCTTHHHHHHHH---------TCCHHHHHHHHHHHCCHHHHHHHTTC---CCSSCC--CHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHc---------CCCcCCHHHHHHHcCCHHHHHHHHHc-CCcHHHHHHhccCCCCHHHH
Confidence 3456666665 4666777665544 34556999999999999999999987 44 223445667889999
Q ss_pred HHHcCCHHHHHHHHHcCcccc--cccCCCCCccHHHHHHHcCChHHHHHHHhcCc-ccc--CccchhHHHHHHH-HhccH
Q 046389 84 AAASGNLDLVQLMTEDNEHLA--LDRESVDQYLPIHAGAMSGHKEVVLYLYSITE-GQL--DNKDLIELLIILI-KTDLY 157 (558)
Q Consensus 84 A~~~g~~eiv~~Ll~~~~~~~--~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~--~~~~~~t~l~~a~-~~~~~ 157 (558)
|+.+|+.+++++|+++|++.. .... .+ .||||+|+.+|+.++|++|+++|+ .+. .+..|.||||.|+ ..|+.
T Consensus 135 Aa~~G~~eiv~~Ll~~gad~~~~~i~~-~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~ 212 (376)
T 2aja_A 135 AAENGHLHVLNRLCELAPTEIMAMIQA-EN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHH 212 (376)
T ss_dssp HHHTTCHHHHHHHHHSCTTTHHHHHSH-HH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCH
T ss_pred HHHcCCHHHHHHHHhCCCCccccccCC-CC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCH
Confidence 999999999999999987521 1222 23 899999999999999999999988 233 6777889999999 99999
Q ss_pred HHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHH----------
Q 046389 158 EVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQ---------- 227 (558)
Q Consensus 158 ~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~---------- 227 (558)
++++.|++. +. .|.||||.|+..|+.+ +...+...|.+.+.... .+..|+..+
T Consensus 213 eiv~~Ll~~-ga-------~~~taL~~Aa~~g~~e-vv~lL~~~ga~~~~~~~--------~l~~A~~~g~~~vv~~~~~ 275 (376)
T 2aja_A 213 NVINFLLDC-PV-------MLAYAEIHEFEYGEKY-VNPFIARHVNRLKEMHD--------AFKLSNPDGVFDLVTKSEC 275 (376)
T ss_dssp HHHHHHTTS-HH-------HHHHHHHCTTTTTTTT-HHHHHHHHHHHHHHHHT--------TTTTTSSSSCCCCSSHHHH
T ss_pred HHHHHHHhC-CC-------ccchHHHHHHHCCCHH-HHHHHHhcCcccccccH--------HHHHHHHCCChhhhcHHhh
Confidence 999999884 32 3789999999888874 33333333333322110 111111111
Q ss_pred --HHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCcc----cccccCCCCcHHHHHHHcCcH
Q 046389 228 --AITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYI----ISKHDDMGRTMFHIAVLNHQV 301 (558)
Q Consensus 228 --~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~----~~~~d~~g~t~Lh~A~~~~~~ 301 (558)
...+++.++..+ ..+..+.+++|++.+..- ....++.+.||||+|+..|+.
T Consensus 276 ~~~~~~~~~li~~~-----------------------~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~ 332 (376)
T 2aja_A 276 LQGFYMLRNLIRRN-----------------------DEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQ 332 (376)
T ss_dssp HHHHHHHHHHHHHC-----------------------CGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCT
T ss_pred hhhHHHHHHHHHcc-----------------------hhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcH
Confidence 111122222111 123456667766532110 012234577899999999999
Q ss_pred HHHHHHHhcCCcccceeeeccCCCCchhhHhhcCCCCCCCcc
Q 046389 302 KILELINEMGSMKDRIVSRRDYGGNNILHMAGMQPSNEGPNV 343 (558)
Q Consensus 302 ~iv~~Ll~~ga~~~~~in~~d~~g~TpLh~A~~~~~~~~~~~ 343 (558)
+++++|++.|. .+|..|+||+.+|-..|..++.+.
T Consensus 333 e~v~lLl~~~~-------v~~~~~~~~~~~~~~~~~~~~~~~ 367 (376)
T 2aja_A 333 GACALLLSIPS-------VLALTKANNYYINETGGRLDLRAV 367 (376)
T ss_dssp THHHHHTTSHH-------HHHSCC------------------
T ss_pred HHHHHHHcChH-------HHHHHHHhccccccccccccHHHH
Confidence 99999998753 578999999999999998776554
No 55
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=1.3e-29 Score=241.54 Aligned_cols=184 Identities=20% Similarity=0.177 Sum_probs=156.3
Q ss_pred ccCCcHHHHHHHHcCCHHHHHHHHh---hCchhhhhh---cCCCCchHHHHHH---HCCCHHHHHHHhcCCCc-------
Q 046389 5 EKSTLSKLYRAALDDDWQTAETIFE---SHEDYVKAS---LSKLGETALHVAA---SAGRIDFVKNLLGYSPQ------- 68 (558)
Q Consensus 5 d~~g~t~L~~A~~~g~~~~v~~ll~---~~~~~~~~~---~~~~g~t~Lh~Aa---~~g~~~~v~~Ll~~~~~------- 68 (558)
|..|+++||.|+..|+.+.++.+++ +.+.+++.. .+..|.||||+|+ +.|+.+++++|++. ++
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~-g~~~~~~~~ 80 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDI-AEKTGNMRE 80 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHH-HHHTTCHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHh-cccccchHh
Confidence 5678999999999999997776666 345556544 1377999999999 77999999999996 42
Q ss_pred ----ccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCC-------------CCCccHHHHHHHcCChHHHHHH
Q 046389 69 ----VLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRES-------------VDQYLPIHAGAMSGHKEVVLYL 131 (558)
Q Consensus 69 ----~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~-------------~~g~tpLh~A~~~g~~~~v~~L 131 (558)
.++..|..|.||||+|+..|+.+++++|+++|++++. .+. ..|.||||+|+..|+.+++++|
T Consensus 81 ~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 159 (260)
T 3jxi_A 81 FINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHA-QARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYL 159 (260)
T ss_dssp HHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHH
T ss_pred hhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCc-cccccccCcccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 3555667999999999999999999999999998753 321 3799999999999999999999
Q ss_pred Hh---cCc-cccCccchhHHHHHHHHhcc---------HHHHHHHHhhCCccc-------ccccCCCCcHHHHHhcCCCc
Q 046389 132 YS---ITE-GQLDNKDLIELLIILIKTDL---------YEVALRLFKDHPQLA-------TLRDSNEETALHALAGKSMM 191 (558)
Q Consensus 132 l~---~~~-~~~~~~~~~t~l~~a~~~~~---------~~~~~~Ll~~~~~~~-------~~~d~~g~t~L~~a~~~~~~ 191 (558)
++ .++ .+..+..|.||||.|+..++ .++++.|++. +.++ +.+|.+|.||||+|+..|+.
T Consensus 160 l~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~-ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~ 238 (260)
T 3jxi_A 160 TENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIK-CAKLFPDTNLEALLNNDGLSPLMMAAKTGKI 238 (260)
T ss_dssp HHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHH-HHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred HhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHh-CcccccccchhhcccCCCCCHHHHHHHcCCH
Confidence 99 777 67789999999999998877 6899999997 5665 67899999999999999986
No 56
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=1e-28 Score=219.60 Aligned_cols=170 Identities=16% Similarity=0.142 Sum_probs=134.2
Q ss_pred CchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHc
Q 046389 43 GETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMS 122 (558)
Q Consensus 43 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~ 122 (558)
+.||||.|+..|+.++++.|++.++..++.+|..|.||||+|+..|+.+++++|+++|+++ ...+ ..|.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~ 79 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILA-KERESALSLASTG 79 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCC-TTCCCHHHHHHHT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhc-ccCCCHHHHHHHC
Confidence 4688999999999999999998856668888999999999999999999999999998886 4555 7889999999999
Q ss_pred CChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhcccc
Q 046389 123 GHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQNQQG 202 (558)
Q Consensus 123 g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~ 202 (558)
|+.+++++|+++++ +++.+|
T Consensus 80 ~~~~~v~~Ll~~g~---------------------------------~~~~~~--------------------------- 99 (172)
T 3v30_A 80 GYTDIVGLLLERDV---------------------------------DINIYD--------------------------- 99 (172)
T ss_dssp TCHHHHHHHHTTTC---------------------------------CTTCCC---------------------------
T ss_pred CCHHHHHHHHHcCC---------------------------------CCCCCC---------------------------
Confidence 99888888877654 112222
Q ss_pred hhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCcccc
Q 046389 203 MLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYIIS 282 (558)
Q Consensus 203 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~ 282 (558)
..|.||||+|+..|+.+++++|+++|+++ +
T Consensus 100 -------------------------------------------------~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~ 129 (172)
T 3v30_A 100 -------------------------------------------------WNGGTPLLYAVRGNHVKCVEALLARGADL-T 129 (172)
T ss_dssp -------------------------------------------------TTSCCHHHHHHHTTCHHHHHHHHHTTCCT-T
T ss_pred -------------------------------------------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCc-c
Confidence 34577777888888888999999999988 8
Q ss_pred cccCCCCcHHHHHHHcCcHHHHHHHHhcCCcccceeeeccCCCCch
Q 046389 283 KHDDMGRTMFHIAVLNHQVKILELINEMGSMKDRIVSRRDYGGNNI 328 (558)
Q Consensus 283 ~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~~~~~in~~d~~g~Tp 328 (558)
.+|..|+||||+|+.+|+.+++++|+++|++ +..++..|.||
T Consensus 130 ~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~----~~~~~~~~~~p 171 (172)
T 3v30_A 130 TEADSGYTPMDLAVALGYRKVQQVIENHILK----LFQSNLVPADP 171 (172)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH----HSCC-------
T ss_pred ccCCCCCCHHHHHHHhCcHHHHHHHHHHHHH----HhcccCCCCCC
Confidence 8899999999999999999999999999988 66788888877
No 57
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=1.5e-28 Score=218.53 Aligned_cols=169 Identities=15% Similarity=0.106 Sum_probs=148.7
Q ss_pred CcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHc
Q 046389 8 TLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAAS 87 (558)
Q Consensus 8 g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~ 87 (558)
+.||||.|+..|+.+.+++++++.+..++.. +..|.||||+|+..|+.+++++|++. +++++.+|..|.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~ 79 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKP-DERGFTPLIWASAFGEIETVRFLLEW-GADPHILAKERESALSLASTG 79 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCC-CTTSCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTCCCHHHHHHHT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCC-CCCCCCHHHHHHHcCCHHHHHHHHHc-CCCchhhcccCCCHHHHHHHC
Confidence 4689999999999999999999877767776 88999999999999999999999998 899999999999999999999
Q ss_pred CCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHHHHHhh
Q 046389 88 GNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVALRLFKD 166 (558)
Q Consensus 88 g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 166 (558)
|+.+++++|+++|+++ ...+ ..|.||||+|+..|+.+++++|+++++ .+..+..|.|||+.|+..++.++++.|+++
T Consensus 80 ~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (172)
T 3v30_A 80 GYTDIVGLLLERDVDI-NIYD-WNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENH 157 (172)
T ss_dssp TCHHHHHHHHTTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCC-CCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHH
Confidence 9999999999999997 4566 899999999999999999999999998 667888999999999999999999999998
Q ss_pred CCcccccccCCCCcH
Q 046389 167 HPQLATLRDSNEETA 181 (558)
Q Consensus 167 ~~~~~~~~d~~g~t~ 181 (558)
+.....++..|.||
T Consensus 158 -~~~~~~~~~~~~~p 171 (172)
T 3v30_A 158 -ILKLFQSNLVPADP 171 (172)
T ss_dssp -HHHHSCC-------
T ss_pred -HHHHhcccCCCCCC
Confidence 55556667777766
No 58
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=4.1e-29 Score=239.96 Aligned_cols=189 Identities=18% Similarity=0.174 Sum_probs=102.8
Q ss_pred CchHHHHHHHCCCHHHHHHHhcCCCcc--cccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHH
Q 046389 43 GETALHVAASAGRIDFVKNLLGYSPQV--LKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGA 120 (558)
Q Consensus 43 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~--~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~ 120 (558)
+.+++|.|+..|+.+.++.+++. ..+ +|.+|.+|.||||+|+..|+.+++++|++.|+......+ ..|.||||+|+
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~-~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~-~~g~tpL~~a~ 153 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSAR-LLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQN-RAGYSPIMLTA 153 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHH-HHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCC-TTSCCHHHHGG
T ss_pred hccCCCHHHHHHHHHHHHHHHHH-HHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCC-CCCCCHHHHHH
Confidence 34555666666666666666553 222 555666666666666666666666666666652223444 56666666665
Q ss_pred -----HcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhh
Q 046389 121 -----MSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYL 195 (558)
Q Consensus 121 -----~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~ 195 (558)
..++.+++++|++.+. ..+..+..|.||||+|+..|+.
T Consensus 154 ~~~~~~~~~~~~v~~Ll~~g~---------------------------------~~~~~~~~g~tpLh~A~~~g~~---- 196 (276)
T 4hbd_A 154 LATLKTQDDIETVLQLFRLGN---------------------------------INAKASQAGQTALMLAVSHGRV---- 196 (276)
T ss_dssp GCCCCSHHHHHHHHHHHHHSC---------------------------------TTCCCTTTCCCHHHHHHHTTCH----
T ss_pred HHHhhhhhhHHHHHHHHHcCC---------------------------------CccccCCCCCCHHHHHHHcCCH----
Confidence 3344444444443332 2233344455555555544443
Q ss_pred hhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHH
Q 046389 196 ANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIR 275 (558)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~ 275 (558)
+++++|++.|++++.. |..|.||||+|+..|+.+++++|++
T Consensus 197 ----------------------------------~~v~~Ll~~gad~n~~-----d~~G~TpLh~A~~~g~~~iv~~Ll~ 237 (276)
T 4hbd_A 197 ----------------------------------DVVKALLACEADVNVQ-----DDDGSTALMCACEHGHKEIAGLLLA 237 (276)
T ss_dssp ----------------------------------HHHHHHHHTTCCTTCC-----CTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred ----------------------------------HHHHHHHhCCCCCCCC-----CCCCCCHHHHHHHCCCHHHHHHHHh
Confidence 4445555544443322 2455566666666666666666666
Q ss_pred -hCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhc
Q 046389 276 -EYPYIISKHDDMGRTMFHIAVLNHQVKILELINEM 310 (558)
Q Consensus 276 -~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ 310 (558)
.|+++ +.+|..|+||||+|+.+|+.+++++|+++
T Consensus 238 ~~gad~-~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 272 (276)
T 4hbd_A 238 VPSCDI-SLTDRDGSTALMVALDAGQSEIASMLYSR 272 (276)
T ss_dssp STTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred cCCCCC-cCcCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 55555 56666666666666666666666666654
No 59
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.4e-30 Score=242.58 Aligned_cols=187 Identities=14% Similarity=0.042 Sum_probs=154.7
Q ss_pred CCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHH
Q 046389 40 SKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAG 119 (558)
Q Consensus 40 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A 119 (558)
+.+|.||||.|+..|+.++|++|++. +.+++.+|..|.||||+|+..|+.+++++|+++|+++ +..+ ..|.||||+|
T Consensus 18 ~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-n~~d-~~g~tpLh~A 94 (229)
T 2vge_A 18 RLNPLVLLLDAALTGELEVVQQAVKE-MNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV-NSPD-SHGWTPLHCA 94 (229)
T ss_dssp TSCHHHHHHHHHHHTCHHHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTCCCHHHHH
T ss_pred ccchhHHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCC-CCCCCHHHHH
Confidence 66788999999999999999999998 8889999999999999999999999999999999987 4566 7899999999
Q ss_pred HHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhhCCccccccc-CCCCcHHHHHhcCCCchhhhhhh
Q 046389 120 AMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRD-SNEETALHALAGKSMMSSYLANQ 198 (558)
Q Consensus 120 ~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d-~~g~t~L~~a~~~~~~~~~~~~~ 198 (558)
+..|+.+++++|++.++ +++.++ .+|
T Consensus 95 ~~~g~~~~v~~Ll~~ga---------------------------------~~~~~~~~~g-------------------- 121 (229)
T 2vge_A 95 ASCNDTVICMALVQHGA---------------------------------AIFATTLSDG-------------------- 121 (229)
T ss_dssp HHTTCHHHHHHHHTTTC---------------------------------CTTCCCSSTT--------------------
T ss_pred HHcCCHHHHHHHHHcCC---------------------------------CcccccCCCC--------------------
Confidence 99999999999887765 222222 344
Q ss_pred cccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHH--HhcChHHHHHHHHHh
Q 046389 199 NQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVA--AEKGNIEFLRVLIRE 276 (558)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~A--a~~g~~~iv~~Ll~~ 276 (558)
.||||+| +..|+.+++++|+++
T Consensus 122 --------------------------------------------------------~tpL~~A~a~~~~~~~~v~~Ll~~ 145 (229)
T 2vge_A 122 --------------------------------------------------------ATAFEKCDPYREGYADCATYLADV 145 (229)
T ss_dssp --------------------------------------------------------CCTGGGCCTTSTTHHHHHHHHHHH
T ss_pred --------------------------------------------------------CCHHHHHHHHhcChHHHHHHHHHc
Confidence 4555555 566778889999999
Q ss_pred CCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcCCcccceeeeccCCCCchhhHhhcCCCCCCCccc
Q 046389 277 YPYIISKHDDMGRTMFHIAVLNHQVKILELINEMGSMKDRIVSRRDYGGNNILHMAGMQPSNEGPNVV 344 (558)
Q Consensus 277 ~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~~~~~in~~d~~g~TpLh~A~~~~~~~~~~~l 344 (558)
|+++ +..|..|.||+|.++..+.. ++|++.|++.+ ++.+|.+|+||||+|+..|+.++++..
T Consensus 146 ga~~-~~~~~~~~~~l~~~~~~~~~---~~ll~~ga~~~--~~~~d~~G~TpL~~A~~~g~~~~v~~~ 207 (229)
T 2vge_A 146 EQSM-GLMNSGAVYALWDYSAEFGD---ELSFREGESVT--VLRRDGPEETDWWWAALHGQEGYVPRN 207 (229)
T ss_dssp HHHT-TTSGGGEEEESSCBCCSSTT---BCCBCTTCEEE--EEESSCTTCSSEEEEEETTEEEEEEGG
T ss_pred CCCc-ccccCCchHHHHHHhhcccc---ccCcccccccc--ccccCCCcccHHHHHHHcCCcceeehh
Confidence 9887 88888999999876555433 67888998866 789999999999999999998887753
No 60
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.96 E-value=1.5e-30 Score=258.87 Aligned_cols=277 Identities=14% Similarity=0.045 Sum_probs=179.9
Q ss_pred ccCCcHHHHHHHHcCCHHHHHHHHhhCchhh-hhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcc---cccccCCCCcH
Q 046389 5 EKSTLSKLYRAALDDDWQTAETIFESHEDYV-KASLSKLGETALHVAASAGRIDFVKNLLGYSPQV---LKLTDYFGQTA 80 (558)
Q Consensus 5 d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~-~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~---~~~~d~~g~Tp 80 (558)
+.++.||||.|+..|+.++++.|++...... ....+..|.||||+||+.|+.++|++|++. +++ .+..+.+ .||
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~-gad~~~~~i~~~~-~Tp 166 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCEL-APTEIMAMIQAEN-YHA 166 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHS-CTTTHHHHHSHHH-HHH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhC-CCCccccccCCCC-CCH
Confidence 4567899999999999999998887643111 011245688999999999999999999998 543 2222233 999
Q ss_pred hHHHHHcCCHHHHHHHHHcCccccc-ccCCCCCccHHHHHH-HcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHH
Q 046389 81 LSLAAASGNLDLVQLMTEDNEHLAL-DRESVDQYLPIHAGA-MSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYE 158 (558)
Q Consensus 81 Lh~A~~~g~~eiv~~Ll~~~~~~~~-~~~~~~g~tpLh~A~-~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~ 158 (558)
||+|+.+|+.+++++|+++|++++. ..+ ..|.||||+|+ .+|+.++|++|++.++ .+.||++.|+..|+.+
T Consensus 167 Lh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d-~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga------~~~taL~~Aa~~g~~e 239 (376)
T 2aja_A 167 FRLAAENGHLHVLNRLCELAPTEATAMIQ-AENYYAFRWAAVGRGHHNVINFLLDCPV------MLAYAEIHEFEYGEKY 239 (376)
T ss_dssp HHHHHHTTCHHHHHHHHHSCGGGHHHHHH-HHHHHHHHHHHSTTCCHHHHHHHTTSHH------HHHHHHHCTTTTTTTT
T ss_pred HHHHHHCCCHHHHHHHHHcCCccchhccC-CCCCCHHHHHHHHCCCHHHHHHHHhCCC------ccchHHHHHHHCCCHH
Confidence 9999999999999999999998643 255 78999999999 9999999999999764 4899999999999999
Q ss_pred HHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHH
Q 046389 159 VALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKE 238 (558)
Q Consensus 159 ~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~ 238 (558)
+++.|++. +.+.+..+ ++++.|+..|+.+.+.......+...- ...+ ........+.+++|++.
T Consensus 240 vv~lL~~~-ga~~~~~~----~~l~~A~~~g~~~vv~~~~~~~~~~~~----------~~li-~~~~~~~~~~~~~Ll~~ 303 (376)
T 2aja_A 240 VNPFIARH-VNRLKEMH----DAFKLSNPDGVFDLVTKSECLQGFYML----------RNLI-RRNDEVLLDDIRFLLSI 303 (376)
T ss_dssp HHHHHHHH-HHHHHHHH----TTTTTTSSSSCCCCSSHHHHHHHHHHH----------HHHH-HHCCGGGHHHHHHHHTS
T ss_pred HHHHHHhc-Cccccccc----HHHHHHHHCCChhhhcHHhhhhhHHHH----------HHHH-HcchhhHHHHHHHHHhC
Confidence 99999987 45444433 478889999987543211000000000 0000 00012235666777653
Q ss_pred hhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhc
Q 046389 239 VIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYIISKHDDMGRTMFHIAVLNHQVKILELINEM 310 (558)
Q Consensus 239 ~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ 310 (558)
...-.........+.+.+|||+|+..|+.+++++|++.+ ..++..|+|++..|-.+|+.++.+.-+++
T Consensus 304 ~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (376)
T 2aja_A 304 PGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIP----SVLALTKANNYYINETGGRLDLRAVALEH 371 (376)
T ss_dssp TTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSH----HHHHSCC----------------------
T ss_pred hhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcCh----HHHHHHHHhccccccccccccHHHHHHHH
Confidence 210000000011234579999999999999999999854 66788999999999999999998876543
No 61
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=4.7e-28 Score=213.09 Aligned_cols=160 Identities=18% Similarity=0.258 Sum_probs=133.5
Q ss_pred CCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHH
Q 046389 41 KLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGA 120 (558)
Q Consensus 41 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~ 120 (558)
....||||.|+..|+.+++++|++. +.+++.+|..|.||||+|+. |+.+++++|+++|+++ ..++ ..|.||||+|+
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~ 78 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQN-NVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKD-RTGFAVIHDAA 78 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTS-CCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhC-CCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCC-CCCCCHHHHHH
Confidence 3467899999999999999999987 88889999999999999998 9999999999999886 4556 78999999999
Q ss_pred HcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhcc
Q 046389 121 MSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQNQ 200 (558)
Q Consensus 121 ~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~ 200 (558)
..|+.+++++|+++++ +++.+|
T Consensus 79 ~~~~~~~v~~Ll~~g~---------------------------------~~~~~~------------------------- 100 (162)
T 1ihb_A 79 RAGFLDTLQTLLEFQA---------------------------------DVNIED------------------------- 100 (162)
T ss_dssp HHTCHHHHHHHHHTTC---------------------------------CTTCCC-------------------------
T ss_pred HcCCHHHHHHHHHcCC---------------------------------CCCCcC-------------------------
Confidence 9999999888887664 112222
Q ss_pred cchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCcc
Q 046389 201 QGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYI 280 (558)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~ 280 (558)
..|.||||+|+..|+.+++++|+++|++.
T Consensus 101 ---------------------------------------------------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 129 (162)
T 1ihb_A 101 ---------------------------------------------------NEGNLPLHLAAKEGHLRVVEFLVKHTASN 129 (162)
T ss_dssp ---------------------------------------------------TTSCCHHHHHHHTTCHHHHHHHHHHSCCC
T ss_pred ---------------------------------------------------CCCCCHHHHHHHcCCHHHHHHHHHccCCC
Confidence 34577777888888889999999999986
Q ss_pred cccccCCCCcHHHHHHHcCcHHHHHHHHhcCCc
Q 046389 281 ISKHDDMGRTMFHIAVLNHQVKILELINEMGSM 313 (558)
Q Consensus 281 ~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~ 313 (558)
.+..|..|+||||+|+.+|+.+++++|+++|+|
T Consensus 130 ~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 130 VGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred CCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 688999999999999999999999999999975
No 62
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=4.1e-28 Score=219.92 Aligned_cols=163 Identities=19% Similarity=0.175 Sum_probs=135.9
Q ss_pred hhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCcc
Q 046389 35 VKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYL 114 (558)
Q Consensus 35 ~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~t 114 (558)
++.+ |..|+||||+|+..|+.+++++|++. +.+++.+|..|.||||+|+..|+.+++++|+++|+++ ...+ ..|.|
T Consensus 28 ~n~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t 103 (192)
T 2rfm_A 28 RNYR-DSYNRTPLMVACMLGMENAIDKLVEN-FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKD-FSGKT 103 (192)
T ss_dssp HTCC-CTTCCCHHHHHHHHTCGGGHHHHHHH-HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCC-TTSCC
T ss_pred HhCc-CCCCCCHHHHHHHcCCHHHHHHHHHh-ccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCC-CCCCc
Confidence 4444 78889999999999999999999987 7888888888999999999999999999999988886 4555 78889
Q ss_pred HHHHHHHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhh
Q 046389 115 PIHAGAMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSY 194 (558)
Q Consensus 115 pLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~ 194 (558)
|||+|+..|+.+++++|+++++ +++.+
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~g~---------------------------------~~~~~-------------------- 130 (192)
T 2rfm_A 104 PLMWSIIFGYSEMSYFLLEHGA---------------------------------NVNDR-------------------- 130 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTC---------------------------------CSSCC--------------------
T ss_pred HHHHHHHcCCHHHHHHHHHCCC---------------------------------CCCCC--------------------
Confidence 9999988888888888877654 11222
Q ss_pred hhhhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHH
Q 046389 195 LANQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLI 274 (558)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll 274 (558)
+..|.||||+|+..|+.+++++|+
T Consensus 131 --------------------------------------------------------~~~g~t~L~~A~~~~~~~~v~~Ll 154 (192)
T 2rfm_A 131 --------------------------------------------------------NLEGETPLIVASKYGRSEIVKKLL 154 (192)
T ss_dssp --------------------------------------------------------CTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred --------------------------------------------------------CCCCCCHHHHHHHcCCHHHHHHHH
Confidence 245577888888889999999999
Q ss_pred HhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcC
Q 046389 275 REYPYIISKHDDMGRTMFHIAVLNHQVKILELINEMG 311 (558)
Q Consensus 275 ~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g 311 (558)
++|+++ +.+|..|+||||+|+.+|+.+++++|+++|
T Consensus 155 ~~ga~~-~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 155 ELGADI-SARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HCCCCC-CCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 999998 899999999999999999999999999865
No 63
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=7.1e-28 Score=218.34 Aligned_cols=160 Identities=17% Similarity=0.154 Sum_probs=148.7
Q ss_pred cccccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHh
Q 046389 2 TCEEKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTAL 81 (558)
Q Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpL 81 (558)
+.+|..|+||||+|+..|+.++++.|++. +.+++.. +..|.||||+|+..|+.+++++|++. +.+++.+|..|.|||
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L 105 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLVEN-FDKLEDK-DIEGSTALIWAVKNNRLGIAEKLLSK-GSNVNTKDFSGKTPL 105 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHHHH-HCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTSCCHH
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHHHh-ccccccc-cccCccHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHH
Confidence 35788999999999999999999988887 6677776 88999999999999999999999998 899999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHH
Q 046389 82 SLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVA 160 (558)
Q Consensus 82 h~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~ 160 (558)
|+|+..|+.+++++|+++|+++ ..++ ..|.||||+|+..|+.+++++|+++++ .+..+..|.||++.|+..++.+++
T Consensus 106 ~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v 183 (192)
T 2rfm_A 106 MWSIIFGYSEMSYFLLEHGANV-NDRN-LEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVI 183 (192)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCS-SCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCC-CCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHH
Confidence 9999999999999999999997 4566 899999999999999999999999998 667888999999999999999999
Q ss_pred HHHHhh
Q 046389 161 LRLFKD 166 (558)
Q Consensus 161 ~~Ll~~ 166 (558)
+.|++.
T Consensus 184 ~~Ll~~ 189 (192)
T 2rfm_A 184 KIFTEV 189 (192)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999886
No 64
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=1.5e-27 Score=211.07 Aligned_cols=159 Identities=16% Similarity=0.140 Sum_probs=131.4
Q ss_pred CCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHH
Q 046389 42 LGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAM 121 (558)
Q Consensus 42 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~ 121 (558)
.|.||||.|+..|+.+++++|++. +.+++.+|..|.||||+|+..|+.+++++|+++|+++ ...+ ..|.||||+|+.
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~ 78 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQ-ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLG-KGRESALSLACS 78 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTCCCHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHc-CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcC-CCCCcHHHHHHH
Confidence 478899999999999999999988 7888888889999999999999999999999998886 4455 788899999998
Q ss_pred cCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhccc
Q 046389 122 SGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQNQQ 201 (558)
Q Consensus 122 ~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~ 201 (558)
.|+.+++++|+++++ +++.+|
T Consensus 79 ~~~~~~v~~Ll~~g~---------------------------------~~~~~~-------------------------- 99 (167)
T 3v31_A 79 KGYTDIVKMLLDCGV---------------------------------DVNEYD-------------------------- 99 (167)
T ss_dssp HTCHHHHHHHHHHTC---------------------------------CTTCCC--------------------------
T ss_pred cCCHHHHHHHHHCCC---------------------------------CCCcCC--------------------------
Confidence 888888888877654 111122
Q ss_pred chhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCccc
Q 046389 202 GMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYII 281 (558)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~ 281 (558)
..|.||||+|+..|+.+++++|+++|+++
T Consensus 100 --------------------------------------------------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~- 128 (167)
T 3v31_A 100 --------------------------------------------------WNGGTPLLYAVHGNHVKCVKMLLESGADP- 128 (167)
T ss_dssp --------------------------------------------------TTSCCHHHHHHHTTCHHHHHHHHHTTCCT-
T ss_pred --------------------------------------------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCC-
Confidence 34577777888888888999999999888
Q ss_pred ccccCCCCcHHHHHHHcCcHHHHHHHHhcCCc
Q 046389 282 SKHDDMGRTMFHIAVLNHQVKILELINEMGSM 313 (558)
Q Consensus 282 ~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~ 313 (558)
+.+|..|+||||+|+..|+.+++++|++++++
T Consensus 129 ~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 129 TIETDSGYNSMDLAVALGYRSVQQVIESHLLK 160 (167)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHH
Confidence 88899999999999999999999999988765
No 65
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=3.3e-27 Score=209.23 Aligned_cols=159 Identities=25% Similarity=0.327 Sum_probs=135.8
Q ss_pred CCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHH
Q 046389 40 SKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAG 119 (558)
Q Consensus 40 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A 119 (558)
...+.|+||.|++.|+.++|++|++. +.+++.+|..|.||||+|+..|+.+++++|+++|+++ ...+ ..|.||||+|
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A 87 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMAN-GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVD-HAGMTPLRLA 87 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccC-CCCCCHHHHH
Confidence 56678999999999999999999998 8899999999999999999999999999999999886 4556 7899999999
Q ss_pred HHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhc
Q 046389 120 AMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQN 199 (558)
Q Consensus 120 ~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~ 199 (558)
+..|+.+++++|+++++ +++.+|
T Consensus 88 ~~~~~~~~~~~Ll~~g~---------------------------------~~~~~~------------------------ 110 (169)
T 2y1l_E 88 ALFGHLEIVEVLLKNGA---------------------------------DVNAND------------------------ 110 (169)
T ss_dssp HHTTCHHHHHHHHHTTC---------------------------------CTTCCC------------------------
T ss_pred HHcCCHHHHHHHHHcCC---------------------------------CCCCCC------------------------
Confidence 99999999998887664 111122
Q ss_pred ccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCc
Q 046389 200 QQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPY 279 (558)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~ 279 (558)
..|.||||+|+..|+.+++++|+++|++
T Consensus 111 ----------------------------------------------------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 138 (169)
T 2y1l_E 111 ----------------------------------------------------MEGHTPLHLAAMFGHLEIVEVLLKNGAD 138 (169)
T ss_dssp ----------------------------------------------------TTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred ----------------------------------------------------CCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 3457778888888889999999999999
Q ss_pred ccccccCCCCcHHHHHHHcCcHHHHHHHHhcC
Q 046389 280 IISKHDDMGRTMFHIAVLNHQVKILELINEMG 311 (558)
Q Consensus 280 ~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g 311 (558)
+ +.+|..|+||||+|+.+|+.+++++|++.|
T Consensus 139 ~-~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 139 V-NAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp T-TCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred C-CCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 8 889999999999999999999999999876
No 66
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=4.3e-28 Score=232.78 Aligned_cols=182 Identities=17% Similarity=0.114 Sum_probs=163.4
Q ss_pred CCcHHHHHHHHcCCHHHHHHHHhhCch-hhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHH
Q 046389 7 STLSKLYRAALDDDWQTAETIFESHED-YVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAA 85 (558)
Q Consensus 7 ~g~t~L~~A~~~g~~~~v~~ll~~~~~-~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~ 85 (558)
.+.+++|.|+..|+.+.++.++..... .++.. |.+|+||||+|+..|+.++|++|++.+..+++.+|..|.||||+|+
T Consensus 75 ~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~-d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~ 153 (276)
T 4hbd_A 75 ACRSDAHPELVRRHLVTFRAMSARLLDYVVNIA-DSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTA 153 (276)
T ss_dssp HHSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGG
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHHHhhcCcCC-CCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHH
Confidence 356788999999999999988766332 35555 8999999999999999999999999944499999999999999999
Q ss_pred -----HcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHH
Q 046389 86 -----ASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEV 159 (558)
Q Consensus 86 -----~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~ 159 (558)
..++.+++++|++.|... ...+ ..|.||||+|+..|+.++|++|++.|+ .+..+..|.||||.|+..|+.++
T Consensus 154 ~~~~~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~i 231 (276)
T 4hbd_A 154 LATLKTQDDIETVLQLFRLGNIN-AKAS-QAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEI 231 (276)
T ss_dssp GCCCCSHHHHHHHHHHHHHSCTT-CCCT-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHhhhhhhHHHHHHHHHcCCCc-cccC-CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHH
Confidence 678999999999999765 4555 789999999999999999999999999 67789999999999999999999
Q ss_pred HHHHHhhCCcccccccCCCCcHHHHHhcCCCc
Q 046389 160 ALRLFKDHPQLATLRDSNEETALHALAGKSMM 191 (558)
Q Consensus 160 ~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~ 191 (558)
++.|++..+.+++.+|.+|.||||+|+..|+.
T Consensus 232 v~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~ 263 (276)
T 4hbd_A 232 AGLLLAVPSCDISLTDRDGSTALMVALDAGQS 263 (276)
T ss_dssp HHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred HHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCH
Confidence 99999967899999999999999999998876
No 67
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=2.9e-27 Score=209.10 Aligned_cols=156 Identities=18% Similarity=0.160 Sum_probs=145.6
Q ss_pred CCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHH
Q 046389 7 STLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAA 86 (558)
Q Consensus 7 ~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~ 86 (558)
+|.||||.|+..|+.+.++.|++. +.+++.. |..|.||||+|+..|+.+++++|++. +.+++.+|..|.||||+|+.
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~-~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~ 78 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQ-ENVINHT-DEEGFTPLMWAAAHGQIAVVEFLLQN-GADPQLLGKGRESALSLACS 78 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHH-SSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHc-CCCcCCC-CCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHH
Confidence 578999999999999999999987 5667777 88999999999999999999999999 89999999999999999999
Q ss_pred cCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHHHHHh
Q 046389 87 SGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVALRLFK 165 (558)
Q Consensus 87 ~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~ 165 (558)
.|+.+++++|+++|+++ ...+ ..|.||||+|+..|+.+++++|+++++ .+..+..|.||++.|+..++.++++.|++
T Consensus 79 ~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 156 (167)
T 3v31_A 79 KGYTDIVKMLLDCGVDV-NEYD-WNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIES 156 (167)
T ss_dssp HTCHHHHHHHHHHTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCC-CcCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 99999999999999997 4566 899999999999999999999999998 66788999999999999999999999998
Q ss_pred hC
Q 046389 166 DH 167 (558)
Q Consensus 166 ~~ 167 (558)
+.
T Consensus 157 ~~ 158 (167)
T 3v31_A 157 HL 158 (167)
T ss_dssp HH
T ss_pred HH
Confidence 73
No 68
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=4e-27 Score=208.62 Aligned_cols=159 Identities=26% Similarity=0.250 Sum_probs=144.3
Q ss_pred ccccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhH
Q 046389 3 CEEKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALS 82 (558)
Q Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh 82 (558)
.....+.++|+.|+..|+.+++++|++. +.+++.. |..|.||||+|+..|+.+++++|++. +.+++.+|..|.||||
T Consensus 9 ~~~~~~~~~l~~A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~ 85 (169)
T 2y1l_E 9 HHGSDLGKKLLEAARAGRDDEVRILMAN-GADVNAE-DASGWTPLHLAAFNGHLEIVEVLLKN-GADVNAVDHAGMTPLR 85 (169)
T ss_dssp ----CHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHH
T ss_pred cCCCcccchHHHHHHcCCHHHHHHHHHC-CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHH
Confidence 3456788999999999999999988876 6778777 88999999999999999999999998 8999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHH
Q 046389 83 LAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVAL 161 (558)
Q Consensus 83 ~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~ 161 (558)
+|+..|+.+++++|+++|+++ ...+ ..|.||||+|+..|+.+++++|+++++ .+..+..|.||++.|+..++.++++
T Consensus 86 ~A~~~~~~~~~~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~ 163 (169)
T 2y1l_E 86 LAALFGHLEIVEVLLKNGADV-NAND-MEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAE 163 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCC-CCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHH
Confidence 999999999999999999997 4566 799999999999999999999999998 5678889999999999999999999
Q ss_pred HHHhh
Q 046389 162 RLFKD 166 (558)
Q Consensus 162 ~Ll~~ 166 (558)
.|++.
T Consensus 164 ~L~~~ 168 (169)
T 2y1l_E 164 ILQKL 168 (169)
T ss_dssp HHHTC
T ss_pred HHHHc
Confidence 99875
No 69
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=2.8e-29 Score=233.78 Aligned_cols=189 Identities=18% Similarity=0.091 Sum_probs=163.1
Q ss_pred ccccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhH
Q 046389 3 CEEKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALS 82 (558)
Q Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh 82 (558)
..+.+|.||||.|+..|+.++++.|++. +.+++.. |..|.||||+|+..|+.+++++|++. +++++.+|..|.||||
T Consensus 16 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~-d~~g~tpLh~A~~~g~~~~v~~Ll~~-ga~~n~~d~~g~tpLh 92 (229)
T 2vge_A 16 RARLNPLVLLLDAALTGELEVVQQAVKE-MNDPSQP-NEEGITALHNAICGANYSIVDFLITA-GANVNSPDSHGWTPLH 92 (229)
T ss_dssp CTTSCHHHHHHHHHHHTCHHHHHHHHHH-SSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHH
T ss_pred ccccchhHHHHHHHHcCCHHHHHHHHhc-CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHH
Confidence 4567899999999999999999999876 6678877 89999999999999999999999999 9999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHH--HHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHH
Q 046389 83 LAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAG--AMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEV 159 (558)
Q Consensus 83 ~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A--~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~ 159 (558)
+|+..|+.+++++|+++|++++...+ ..|+||||+| +..|+.+++++|++.|+ .+..+..+.++++.+...+..
T Consensus 93 ~A~~~g~~~~v~~Ll~~ga~~~~~~~-~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~-- 169 (229)
T 2vge_A 93 CAASCNDTVICMALVQHGAAIFATTL-SDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGD-- 169 (229)
T ss_dssp HHHHTTCHHHHHHHHTTTCCTTCCCS-STTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTT--
T ss_pred HHHHcCCHHHHHHHHHcCCCcccccC-CCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhcccc--
Confidence 99999999999999999999865555 7999999999 99999999999999998 666778888888865554433
Q ss_pred HHHHHhhCCcc--cccccCCCCcHHHHHhcCCCchhhhhhhc
Q 046389 160 ALRLFKDHPQL--ATLRDSNEETALHALAGKSMMSSYLANQN 199 (558)
Q Consensus 160 ~~~Ll~~~~~~--~~~~d~~g~t~L~~a~~~~~~~~~~~~~~ 199 (558)
+.|++. +.+ ++.+|.+|+||||+|+..|+.+.+....+
T Consensus 170 -~~ll~~-ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~l 209 (229)
T 2vge_A 170 -ELSFRE-GESVTVLRRDGPEETDWWWAALHGQEGYVPRNYF 209 (229)
T ss_dssp -BCCBCT-TCEEEEEESSCTTCSSEEEEEETTEEEEEEGGGE
T ss_pred -ccCccc-cccccccccCCCcccHHHHHHHcCCcceeehhhh
Confidence 344444 555 66789999999999999999876644444
No 70
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=2.4e-27 Score=212.22 Aligned_cols=170 Identities=18% Similarity=0.148 Sum_probs=135.9
Q ss_pred CCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHH
Q 046389 40 SKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAG 119 (558)
Q Consensus 40 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A 119 (558)
++.+.++||.|+..|+.+++++|++..+.+++.+|..|.||||+|+..|+.+++++|+++|+++ ...+ ..|.||||+|
T Consensus 2 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A 79 (179)
T 3f6q_A 2 SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMN-RGDDTPLHLA 79 (179)
T ss_dssp -----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTCCCHHHHH
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcC-CCCCCHHHHH
Confidence 3567888999999999999999998777888888999999999999999999999999998886 4555 7888999999
Q ss_pred HHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhc
Q 046389 120 AMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQN 199 (558)
Q Consensus 120 ~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~ 199 (558)
+..|+.+++++|+++++ +++.+|
T Consensus 80 ~~~~~~~~v~~Ll~~g~---------------------------------~~~~~d------------------------ 102 (179)
T 3f6q_A 80 ASHGHRDIVQKLLQYKA---------------------------------DINAVN------------------------ 102 (179)
T ss_dssp HHTTCHHHHHHHHHTTC---------------------------------CTTCCC------------------------
T ss_pred HHcCCHHHHHHHHHcCC---------------------------------CCCccC------------------------
Confidence 99998888888877664 112222
Q ss_pred ccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCc
Q 046389 200 QQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPY 279 (558)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~ 279 (558)
..|.||||+|+..|+.+++++|+++|++
T Consensus 103 ----------------------------------------------------~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 130 (179)
T 3f6q_A 103 ----------------------------------------------------EHGNVPLHYACFWGQDQVAEDLVANGAL 130 (179)
T ss_dssp ----------------------------------------------------TTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred ----------------------------------------------------CCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 3456777778888888899999999998
Q ss_pred ccccccCCCCcHHHHHHHcCcHHHHHHHHhcCCcccceeeeccCCC
Q 046389 280 IISKHDDMGRTMFHIAVLNHQVKILELINEMGSMKDRIVSRRDYGG 325 (558)
Q Consensus 280 ~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~~~~~in~~d~~g 325 (558)
+ +.+|..|+||||+|+..++.+++++|+++|++ ++..+.++
T Consensus 131 ~-~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~----~~~~~~~~ 171 (179)
T 3f6q_A 131 V-SICNKYGEMPVDKAKAPLRELLRERAEKMGQN----LNRIPYKD 171 (179)
T ss_dssp S-SBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCC----CSCBCCCC
T ss_pred c-chhccCCCCcHHHHHHHHHHHHHHHHHHhhcC----cccCCccc
Confidence 8 88999999999999999999999999999998 44555443
No 71
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=2.5e-27 Score=212.12 Aligned_cols=166 Identities=17% Similarity=0.105 Sum_probs=149.4
Q ss_pred cCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHH
Q 046389 6 KSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAA 85 (558)
Q Consensus 6 ~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~ 85 (558)
.++.++||.|+..|+.+.++.|++..+.+++.. +..|.||||+|+..|+.+++++|++. +.+++.+|..|.||||+|+
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~ 80 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQG-DDHGFSPLHWACREGRSAVVEMLIMR-GARINVMNRGDDTPLHLAA 80 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCccccccc-CCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCCCHHHHHH
Confidence 467899999999999999999999888888877 89999999999999999999999999 8999999999999999999
Q ss_pred HcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHHHHH
Q 046389 86 ASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVALRLF 164 (558)
Q Consensus 86 ~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~Ll 164 (558)
..|+.+++++|+++|+++ +..+ ..|.||||+|+..|+.+++++|+++++ .+..+..|.||++.|+..++.++++.|+
T Consensus 81 ~~~~~~~v~~Ll~~g~~~-~~~d-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~ 158 (179)
T 3f6q_A 81 SHGHRDIVQKLLQYKADI-NAVN-EHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAE 158 (179)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCC-CccC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999997 4566 899999999999999999999999998 6778999999999999999999999999
Q ss_pred hhCCcccccccC
Q 046389 165 KDHPQLATLRDS 176 (558)
Q Consensus 165 ~~~~~~~~~~d~ 176 (558)
+. +.+++..+.
T Consensus 159 ~~-g~~~~~~~~ 169 (179)
T 3f6q_A 159 KM-GQNLNRIPY 169 (179)
T ss_dssp HT-TCCCSCBCC
T ss_pred Hh-hcCcccCCc
Confidence 87 555444433
No 72
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=1.8e-27 Score=210.09 Aligned_cols=158 Identities=20% Similarity=0.196 Sum_probs=141.6
Q ss_pred cccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHH
Q 046389 4 EEKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSL 83 (558)
Q Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~ 83 (558)
.|.+|.|+||.|+..|+.+.++.|++..+.+++.. +..|.||||+|+..|+.+++++|++. +.+++.+|..|.||||+
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~ 81 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDI-EGRQSTPLHFAAGYNRVSVVEYLLQH-GADVHAKDKGGLVPLHN 81 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCT-TTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCcccc-ccCCCCHHHHHHHcChHHHHHHHHhc-CCCCCccCCCCCCHHHH
Confidence 57889999999999999999999998777676666 78899999999999999999999998 89999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHHH
Q 046389 84 AAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVALR 162 (558)
Q Consensus 84 A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~ 162 (558)
|+..|+.+++++|+++|+++ +..+ ..|.||||+|+..|+.+++++|+++++ .+..+..|.||++.|.. ++.++++.
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~ 158 (165)
T 3twr_A 82 ACSYGHYEVAELLVKHGAVV-NVAD-LWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDL 158 (165)
T ss_dssp HHHTTCHHHHHHHHHTTCCT-TCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHH
T ss_pred HHHcCcHHHHHHHHhCCCCC-CCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHH
Confidence 99999999999999999997 4566 899999999999999999999999988 66678888888888766 77888888
Q ss_pred HHhh
Q 046389 163 LFKD 166 (558)
Q Consensus 163 Ll~~ 166 (558)
|+++
T Consensus 159 L~~~ 162 (165)
T 3twr_A 159 LRGD 162 (165)
T ss_dssp HHTC
T ss_pred Hhhc
Confidence 8765
No 73
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=6.9e-27 Score=204.19 Aligned_cols=155 Identities=21% Similarity=0.226 Sum_probs=142.3
Q ss_pred CCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHH
Q 046389 7 STLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAA 86 (558)
Q Consensus 7 ~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~ 86 (558)
++.|+||.|+..|+.+.++.|++..+.+++.. +..|.||||+ +..|+.+++++|++. +.+++.+|..|.||||+|+.
T Consensus 1 r~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~-~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~ 77 (156)
T 1bd8_A 1 RAGDRLSGAAARGDVQEVRRLLHRELVHPDAL-NRFGKTALQV-MMFGSTAIALELLKQ-GASPNVQDTSGTSPVHDAAR 77 (156)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCCTTCC-CTTSCCHHHH-SCTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHH
T ss_pred CcchHHHHHHHhCCHHHHHHHHHhhCcCcccc-CCCCCcHHHH-HHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHH
Confidence 35789999999999999999998855577776 8899999999 999999999999999 89999999999999999999
Q ss_pred cCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhh
Q 046389 87 SGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKD 166 (558)
Q Consensus 87 ~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 166 (558)
.|+.+++++|+++|+++ ..++ ..|.||||+|+..|+.+++++|++....+..+..|.|||+.|+..++.++++.|+++
T Consensus 78 ~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 78 TGFLDTLKVLVEHGADV-NVPD-GTGALPIHLAVQEGHTAVVSFLAAESDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp TTCHHHHHHHHHTTCCS-CCCC-TTSCCHHHHHHHHTCHHHHHHHHTTSCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred cCcHHHHHHHHHcCCCC-CCcC-CCCCcHHHHHHHhChHHHHHHHHhccCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 99999999999999987 4566 799999999999999999999999933677888999999999999999999999875
No 74
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=3.9e-27 Score=207.85 Aligned_cols=160 Identities=21% Similarity=0.253 Sum_probs=137.4
Q ss_pred CCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHH
Q 046389 40 SKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAG 119 (558)
Q Consensus 40 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A 119 (558)
+..|.||||.|++.|+.++++.|++..+.+++..+..|.||||+|+..|+.+++++|+++|+++ ...+ ..|.||||+|
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A 82 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKD-KGGLVPLHNA 82 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccC-CCCCCHHHHH
Confidence 6678999999999999999999999768888899999999999999999999999999999987 4566 7899999999
Q ss_pred HHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhc
Q 046389 120 AMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQN 199 (558)
Q Consensus 120 ~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~ 199 (558)
+..|+.+++++|+++++ +++.+|
T Consensus 83 ~~~~~~~~v~~Ll~~g~---------------------------------~~~~~~------------------------ 105 (165)
T 3twr_A 83 CSYGHYEVAELLVKHGA---------------------------------VVNVAD------------------------ 105 (165)
T ss_dssp HHTTCHHHHHHHHHTTC---------------------------------CTTCCC------------------------
T ss_pred HHcCcHHHHHHHHhCCC---------------------------------CCCCcC------------------------
Confidence 99999999999987764 112222
Q ss_pred ccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCc
Q 046389 200 QQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPY 279 (558)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~ 279 (558)
..|.||||+|+..|+.+++++|+++|++
T Consensus 106 ----------------------------------------------------~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 133 (165)
T 3twr_A 106 ----------------------------------------------------LWKFTPLHEAAAKGKYEICKLLLQHGAD 133 (165)
T ss_dssp ----------------------------------------------------TTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred ----------------------------------------------------CCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 3457778888888899999999999999
Q ss_pred ccccccCCCCcHHHHHHHcCcHHHHHHHHhcCC
Q 046389 280 IISKHDDMGRTMFHIAVLNHQVKILELINEMGS 312 (558)
Q Consensus 280 ~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga 312 (558)
+ +.+|..|+||||+|+. ++.+++++|++.|+
T Consensus 134 ~-~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 134 P-TKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp T-TCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred C-cccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 8 8999999999999877 88999999999886
No 75
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=6.8e-27 Score=205.62 Aligned_cols=154 Identities=24% Similarity=0.209 Sum_probs=142.6
Q ss_pred CCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHH
Q 046389 7 STLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAA 86 (558)
Q Consensus 7 ~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~ 86 (558)
...||||.|+..|+.+.++.|++. +.+++.. +..|.||||+|+. |+.+++++|++. +.+++.+|..|.||||+|+.
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~-~~~~~~~-~~~g~t~L~~A~~-~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~ 79 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQN-NVNVNAQ-NGFGRTALQVMKL-GNPEIARRLLLR-GANPDLKDRTGFAVIHDAAR 79 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTS-CCCTTCC-CTTSCCHHHHCCS-SCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhC-CCCcccc-CccCccHHHHHHc-CcHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHH
Confidence 467999999999999999988865 6777777 8899999999999 999999999999 89999999999999999999
Q ss_pred cCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCcc--ccCccchhHHHHHHHHhccHHHHHHHH
Q 046389 87 SGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITEG--QLDNKDLIELLIILIKTDLYEVALRLF 164 (558)
Q Consensus 87 ~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~--~~~~~~~~t~l~~a~~~~~~~~~~~Ll 164 (558)
.|+.+++++|+++|+++ ..++ ..|.||||+|+..|+.+++++|+++++. +..+..|.||||.|+..++.++++.|+
T Consensus 80 ~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 157 (162)
T 1ihb_A 80 AGFLDTLQTLLEFQADV-NIED-NEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQ 157 (162)
T ss_dssp HTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCC-CCcC-CCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 99999999999999987 4566 8999999999999999999999999983 678889999999999999999999999
Q ss_pred hh
Q 046389 165 KD 166 (558)
Q Consensus 165 ~~ 166 (558)
++
T Consensus 158 ~~ 159 (162)
T 1ihb_A 158 AN 159 (162)
T ss_dssp HT
T ss_pred Hh
Confidence 87
No 76
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=1.9e-26 Score=200.74 Aligned_cols=150 Identities=20% Similarity=0.198 Sum_probs=135.6
Q ss_pred CcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHc
Q 046389 8 TLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAAS 87 (558)
Q Consensus 8 g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~ 87 (558)
..++||.|+..|+.+.++.|++... +++ . +..|.||||+|+..|+.+++++|++. +.+++.+|..|.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~-~~~-~-~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~ 77 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGA-PFT-T-DWLGTSPLHLAAQYGHFSTTEVLLRA-GVSRDARTKVDRTPLHMAASE 77 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTC-CCC-C-CTTCCCHHHHHHHHTCHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCC-CCC-c-CCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHc
Confidence 4689999999999999999998743 443 3 78899999999999999999999998 899999999999999999999
Q ss_pred CCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHHHH
Q 046389 88 GNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVALRL 163 (558)
Q Consensus 88 g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~L 163 (558)
|+.+++++|+++|+++ ..++ ..|.||||+|+..|+.+++++|+++|+ .+..+..|.||++.|+..|+.++++.|
T Consensus 78 ~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 78 GHANIVEVLLKHGADV-NAKD-MLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TCHHHHHHHHTTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ChHHHHHHHHHcCCCC-CCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999999999997 4566 899999999999999999999999998 566778888999999999988888765
No 77
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=3.6e-26 Score=198.90 Aligned_cols=151 Identities=23% Similarity=0.285 Sum_probs=118.7
Q ss_pred CchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHc
Q 046389 43 GETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMS 122 (558)
Q Consensus 43 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~ 122 (558)
..|+||.|+..|+.+++++|++. +.+++ .|..|.||||+|+..|+.+++++|+++|+++ ...+ ..|.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~-g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~ 77 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMAN-GAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DART-KVDRTPLHMAASE 77 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHH-TCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCC-TTCCCHHHHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHc-CCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCC-CCCCCHHHHHHHc
Confidence 45788888888888888888887 55555 5777888888888888888888888888876 4455 6788888888888
Q ss_pred CChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhcccc
Q 046389 123 GHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQNQQG 202 (558)
Q Consensus 123 g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~ 202 (558)
|+.+++++|+++++ +++.+|
T Consensus 78 ~~~~~v~~Ll~~g~---------------------------------~~~~~~--------------------------- 97 (153)
T 1awc_B 78 GHANIVEVLLKHGA---------------------------------DVNAKD--------------------------- 97 (153)
T ss_dssp TCHHHHHHHHTTTC---------------------------------CTTCCC---------------------------
T ss_pred ChHHHHHHHHHcCC---------------------------------CCCCCC---------------------------
Confidence 88888888776654 112222
Q ss_pred hhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCcccc
Q 046389 203 MLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYIIS 282 (558)
Q Consensus 203 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~ 282 (558)
..|.||||+|+..|+.+++++|+++|+++ +
T Consensus 98 -------------------------------------------------~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~ 127 (153)
T 1awc_B 98 -------------------------------------------------MLKMTALHWATEHNHQEVVELLIKYGADV-H 127 (153)
T ss_dssp -------------------------------------------------TTSCCHHHHHHHTTCHHHHHHHHHTTCCT-T
T ss_pred -------------------------------------------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCc-c
Confidence 34577777888888888999999999888 8
Q ss_pred cccCCCCcHHHHHHHcCcHHHHHHH
Q 046389 283 KHDDMGRTMFHIAVLNHQVKILELI 307 (558)
Q Consensus 283 ~~d~~g~t~Lh~A~~~~~~~iv~~L 307 (558)
.+|..|+||||+|+.+|+.+++++|
T Consensus 128 ~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 128 TQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 8889999999999999999998876
No 78
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=4.2e-26 Score=199.21 Aligned_cols=154 Identities=18% Similarity=0.222 Sum_probs=131.8
Q ss_pred CchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHc
Q 046389 43 GETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMS 122 (558)
Q Consensus 43 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~ 122 (558)
+.||||.|+..|+.+++++|++..+.+++.+|..|.||||+ +..|+.+++++|+++|+++ ..++ ..|.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~ 78 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQD-TSGTSPVHDAART 78 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcC-CCCCCHHHHHHHc
Confidence 56899999999999999999998566899999999999999 9999999999999999986 4566 7999999999999
Q ss_pred CChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhcccc
Q 046389 123 GHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQNQQG 202 (558)
Q Consensus 123 g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~ 202 (558)
|+.+++++|+++|+ +++.+|
T Consensus 79 ~~~~~v~~Ll~~g~---------------------------------~~~~~~--------------------------- 98 (156)
T 1bd8_A 79 GFLDTLKVLVEHGA---------------------------------DVNVPD--------------------------- 98 (156)
T ss_dssp TCHHHHHHHHHTTC---------------------------------CSCCCC---------------------------
T ss_pred CcHHHHHHHHHcCC---------------------------------CCCCcC---------------------------
Confidence 99999999887764 112222
Q ss_pred hhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCcccc
Q 046389 203 MLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYIIS 282 (558)
Q Consensus 203 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~ 282 (558)
..|.||||+|+..|+.+++++|+++ +++ +
T Consensus 99 -------------------------------------------------~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~-~ 127 (156)
T 1bd8_A 99 -------------------------------------------------GTGALPIHLAVQEGHTAVVSFLAAE-SDL-H 127 (156)
T ss_dssp -------------------------------------------------TTSCCHHHHHHHHTCHHHHHHHHTT-SCT-T
T ss_pred -------------------------------------------------CCCCcHHHHHHHhChHHHHHHHHhc-cCC-C
Confidence 3457777788888888999999988 777 8
Q ss_pred cccCCCCcHHHHHHHcCcHHHHHHHHhc
Q 046389 283 KHDDMGRTMFHIAVLNHQVKILELINEM 310 (558)
Q Consensus 283 ~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ 310 (558)
.+|..|+||||+|+.+|+.+++++|+++
T Consensus 128 ~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 128 RRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred CcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 8899999999999999999999999864
No 79
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=6.5e-27 Score=219.70 Aligned_cols=182 Identities=13% Similarity=0.083 Sum_probs=98.1
Q ss_pred CCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHH
Q 046389 42 LGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAM 121 (558)
Q Consensus 42 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~ 121 (558)
.|.||||.|++.|+.+.++.|+++ +++++. +..|.||||.|+..|+.+++++|+++|+++ +..+ ..|.||||+|+.
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~-g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d-~~g~t~L~~A~~ 79 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAH-GMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPN-DEGITALHNAVC 79 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCC-TTSCCHHHHHHH
T ss_pred cccccCchhhhhhhHHHHHHHhcc-CCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcC-CCCCCHHHHHHH
Confidence 456666666666666666666665 555553 244566666666666666666666666554 3334 556666666666
Q ss_pred cCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCchhhhhhhccc
Q 046389 122 SGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMMSSYLANQNQQ 201 (558)
Q Consensus 122 ~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~ 201 (558)
.|+.+++++|+++++ +++.+
T Consensus 80 ~g~~~~v~~Ll~~ga---------------------------------~~~~~--------------------------- 99 (239)
T 1ycs_B 80 AGHTEIVKFLVQFGV---------------------------------NVNAA--------------------------- 99 (239)
T ss_dssp HTCHHHHHHHHHHTC---------------------------------CTTCC---------------------------
T ss_pred cCCHHHHHHHHHcCC---------------------------------CCCcc---------------------------
Confidence 666666655555442 11111
Q ss_pred chhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCccc
Q 046389 202 GMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYII 281 (558)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~ 281 (558)
|..|.||||+|+..|+.+++++|+++|+++
T Consensus 100 -------------------------------------------------d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~- 129 (239)
T 1ycs_B 100 -------------------------------------------------DSDGWTPLHCAASCNNVQVCKFLVESGAAV- 129 (239)
T ss_dssp -------------------------------------------------CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-
T ss_pred -------------------------------------------------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-
Confidence 234466666677777777888888888887
Q ss_pred ccccCCCC-cHHHHH--HHcCcHHHHHHHHhcCCcccce-----eeeccCCCCchhhHhhcCCC
Q 046389 282 SKHDDMGR-TMFHIA--VLNHQVKILELINEMGSMKDRI-----VSRRDYGGNNILHMAGMQPS 337 (558)
Q Consensus 282 ~~~d~~g~-t~Lh~A--~~~~~~~iv~~Ll~~ga~~~~~-----in~~d~~g~TpLh~A~~~~~ 337 (558)
+..|..|. ||||+| +..|+.+++++|+++|++.+.. ....|..|+||++++...|.
T Consensus 130 ~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 130 FAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp TCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred ceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 66666665 888888 7778888888888888775421 22348889999999999886
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=8.2e-27 Score=219.04 Aligned_cols=181 Identities=14% Similarity=0.089 Sum_probs=128.5
Q ss_pred cccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHH
Q 046389 4 EEKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSL 83 (558)
Q Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~ 83 (558)
++..|.||||.|+..|+.+.++.+++. +.+++. ++.|.||||.|+..|+.++|++|++. +++++.+|..|.||||+
T Consensus 1 p~~~g~t~L~~a~~~~~~~~~~~ll~~-g~~~~~--~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~ 76 (239)
T 1ycs_B 1 PEITGQVSLPPGKRTNLRKTGSERIAH-GMRVKF--NPLPLALLLDSSLEGEFDLVQRIIYE-VDDPSLPNDEGITALHN 76 (239)
T ss_dssp ---------------------------------------CHHHHHHHHHHTCHHHHHHHTST-TSSCCCCCTTSCCHHHH
T ss_pred CCccccccCchhhhhhhHHHHHHHhcc-CCCccc--CchhhHHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHH
Confidence 356799999999999999999977765 667764 57899999999999999999999998 88999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc-cccCccchh-HHHHHH--HHhccHHH
Q 046389 84 AAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDLI-ELLIIL--IKTDLYEV 159 (558)
Q Consensus 84 A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~-t~l~~a--~~~~~~~~ 159 (558)
|+..|+.+++++|+++|+++ +.++ ..|+||||+|+..|+.+++++|+++++ .+..+..+. ||+|.| +..|+.++
T Consensus 77 A~~~g~~~~v~~Ll~~ga~~-~~~d-~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~ 154 (239)
T 1ycs_B 77 AVCAGHTEIVKFLVQFGVNV-NAAD-SDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQC 154 (239)
T ss_dssp HHHHTCHHHHHHHHHHTCCT-TCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCH
T ss_pred HHHcCCHHHHHHHHHcCCCC-CccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHH
Confidence 99999999999999999997 5566 799999999999999999999999998 555565555 999999 78899999
Q ss_pred HHHHHhhCCcccccc---------cCCCCcHHHHHhcCCCc
Q 046389 160 ALRLFKDHPQLATLR---------DSNEETALHALAGKSMM 191 (558)
Q Consensus 160 ~~~Ll~~~~~~~~~~---------d~~g~t~L~~a~~~~~~ 191 (558)
++.|++. +...+.. +..+.++++++...|..
T Consensus 155 ~~~Ll~~-~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~~ 194 (239)
T 1ycs_B 155 SQFLYGV-QEKMGIMNKGVIYALWDYEPQNDDELPMKEGDC 194 (239)
T ss_dssp HHHHHHH-HHHTTTTGGGEEEESSCBCCSSTTBCCBCSSCE
T ss_pred HHHHHHh-hhcccccccceEEEEeccCCCCCCcccccCCCE
Confidence 9999987 4444433 66788888888888764
No 81
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.91 E-value=5.1e-25 Score=187.41 Aligned_cols=128 Identities=20% Similarity=0.187 Sum_probs=102.5
Q ss_pred ccccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCC-CCcHh
Q 046389 3 CEEKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYF-GQTAL 81 (558)
Q Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~-g~TpL 81 (558)
..|.+|.||||.|+..|+.++++.|++. +.+++.+ +..|.||||+|+. |+.+++++|++. +++++.+|.. |.|||
T Consensus 7 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~-~~~g~t~L~~A~~-~~~~~v~~Ll~~-g~~~~~~~~~~g~t~L 82 (136)
T 1d9s_A 7 MLGGSSDAGLATAAARGQVETVRQLLEA-GADPNAL-NRFGRRPIQVMMM-GSAQVAELLLLH-GAEPNCADPATLTRPV 82 (136)
T ss_dssp CCCCCCSCHHHHHHHTTCHHHHHHHHHT-TCCTTCC-CTTCCTTTTTSTT-SCHHHHHHHHHH-TCCSSCCBTTTTBCHH
T ss_pred CCCCCCccHHHHHHHcCCHHHHHHHHHc-CCCcCCc-CCCCCCHHHHHHc-CCHHHHHHHHHC-CCCCCCcCCCCCCCHH
Confidence 4577788888888888888888877765 5667666 7788888888888 888888888887 7788888888 88888
Q ss_pred HHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc
Q 046389 82 SLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE 136 (558)
Q Consensus 82 h~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 136 (558)
|+|+..|+.+++++|+++|+++ ..++ ..|.||||+|+..|+.+++++|+++|+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~~-~~~d-~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 83 HDAAREGFLDTLVVLHRAGARL-DVCD-AWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp HHHHHHTCHHHHHHHHHTCCCC-CCCS-SSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHHcCCCC-CccC-CCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 8888888888888888888876 4555 688888888888888888888887765
No 82
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=6.2e-25 Score=196.89 Aligned_cols=167 Identities=10% Similarity=0.043 Sum_probs=114.0
Q ss_pred CchHHHHHHHCCCHHHHHHHhcCCCccccccc-CCCCcHhHHHHHcCCH----HHHHHHHHcCcccccccCCCCCccHHH
Q 046389 43 GETALHVAASAGRIDFVKNLLGYSPQVLKLTD-YFGQTALSLAAASGNL----DLVQLMTEDNEHLALDRESVDQYLPIH 117 (558)
Q Consensus 43 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~g~TpLh~A~~~g~~----eiv~~Ll~~~~~~~~~~~~~~g~tpLh 117 (558)
+.++||.|++.|+.+.++.+++. + ++.++ ..|.||||+|+.+|+. +++++|+++|+++ +.++ ..|+||||
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~-~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d-~~g~TpLh 80 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEK-G--YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRT-KEGTTLFF 80 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHH-S--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCC-TTCCCTHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhc-C--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCC-CCCCcHHH
Confidence 34667777777777777776664 2 23334 5677777777777764 4777777777776 3455 67777777
Q ss_pred HHHHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCC-cHHHHHhcCCCchhhhh
Q 046389 118 AGAMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEE-TALHALAGKSMMSSYLA 196 (558)
Q Consensus 118 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~-t~L~~a~~~~~~~~~~~ 196 (558)
+|+..|+.++.+ ..++++.|++. +.+++.+|..|. ||||+|+..+..
T Consensus 81 ~a~~~~~~~~~~--------------------------~~~iv~~Ll~~-Gadin~~d~~g~ttpLh~A~~~~~~----- 128 (186)
T 3t8k_A 81 PLFQGGGNDITG--------------------------TTELCKIFLEK-GADITALYKPYKIVVFKNIFNYFVD----- 128 (186)
T ss_dssp HHHHHCTTCHHH--------------------------HHHHHHHHHHT-TCCSSSCBGGGTBCTTGGGGGCCSC-----
T ss_pred HHHHcCCcchhh--------------------------HHHHHHHHHHC-CCCCCccCCCcCchHHHHHHHcCCC-----
Confidence 777776643211 12334444443 556677788888 888888774432
Q ss_pred hhcccchhhhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHH-
Q 046389 197 NQNQQGMLQNFFSSANVGSTKLSLSHAVLEQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIR- 275 (558)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~- 275 (558)
..++.+++++|++
T Consensus 129 ------------------------------------------------------------------~~~~~~iv~~Ll~~ 142 (186)
T 3t8k_A 129 ------------------------------------------------------------------ENEMIPLYKLIFSQ 142 (186)
T ss_dssp ------------------------------------------------------------------HHHHHHHHHHHHTS
T ss_pred ------------------------------------------------------------------hhhHHHHHHHHHHh
Confidence 0134577888888
Q ss_pred hCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcCCc
Q 046389 276 EYPYIISKHDDMGRTMFHIAVLNHQVKILELINEMGSM 313 (558)
Q Consensus 276 ~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~ 313 (558)
+|+++ +.+|..|+||||+|++.|+.+++++|.+...+
T Consensus 143 ~gad~-~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~ 179 (186)
T 3t8k_A 143 SGLQL-LIKDKWGLTALEFVKRCQKPIALKMMEDYIKK 179 (186)
T ss_dssp TTCCT-TCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred cCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHHHHH
Confidence 88988 89999999999999999999999999877544
No 83
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.91 E-value=1.2e-24 Score=189.85 Aligned_cols=140 Identities=20% Similarity=0.193 Sum_probs=97.0
Q ss_pred ccccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCc-Hh
Q 046389 3 CEEKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQT-AL 81 (558)
Q Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~T-pL 81 (558)
..+..|.||||+|+..|+.++++.|++. +.+++.. +..|.||||+|+ .|+.+++++|++. +++++.+|..|.| ||
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g~t~L~~A~-~~~~~~v~~Ll~~-g~~~~~~d~~g~ttpL 82 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEA-GANPNAP-NSYGRRPIQVMM-MGSARVAELLLLH-GAEPNCADPATLTRPV 82 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTT-TCCTTCC-CSSSCCTTTSSC-TTCHHHHHHHHTT-TCCCCCCCTTTCCCHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHc-CCCCCCC-CCCCCCHHHHHH-cCCHHHHHHHHHc-CCCCCCcCCCCCcHHH
Confidence 3456778888888888888888877765 6666666 777888888874 7888888888887 7778888888887 88
Q ss_pred HHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc-cccCccchhHHH
Q 046389 82 SLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDLIELL 148 (558)
Q Consensus 82 h~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l 148 (558)
|+|+..|+.+++++|+++|+++ ..++ ..|.||||+|+..|+.+++++|+++|+ .+..+..|.++.
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~~-~~~d-~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~ 148 (156)
T 1bi7_B 83 HDAAREGFLDTLVVLHRAGARL-DVRD-AWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAA 148 (156)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCS-SCCC-TTCCCHHHHHHHHTCHHHHHHHSSCC--------------
T ss_pred HHHHHCCCHHHHHHHHHcCCCC-cccC-CCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCccc
Confidence 8888888888888888888776 4455 678888888888888888888877776 333444444443
No 84
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=3.8e-24 Score=181.98 Aligned_cols=127 Identities=20% Similarity=0.243 Sum_probs=112.2
Q ss_pred cccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHH
Q 046389 4 EEKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSL 83 (558)
Q Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~ 83 (558)
....+.||||+|+..|+.++++.|++. +.+++.. |..|.||||+|+..|+.+++++|++. +++++.+|..|.||||+
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~ 86 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMAN-GADVNAK-DEYGLTPLYLATAHGHLEIVEVLLKN-GADVNAVDAIGFTPLHL 86 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHc-CCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHH
Confidence 456788999999999999999988876 6777776 88899999999999999999999998 88999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcC
Q 046389 84 AAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSIT 135 (558)
Q Consensus 84 A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~ 135 (558)
|+..|+.+++++|+++|+++ ...+ ..|.||||+|+..|+.+++++|++.|
T Consensus 87 A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 87 AAFIGHLEIAEVLLKHGADV-NAQD-KFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHcCCHHHHHHHHHcCCCC-cCcC-CCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999986 4566 79999999999999999999998865
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.90 E-value=1.8e-24 Score=193.89 Aligned_cols=155 Identities=12% Similarity=-0.032 Sum_probs=131.3
Q ss_pred cCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCH----HHHHHHhcCCCcccccccCCCCcHh
Q 046389 6 KSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRI----DFVKNLLGYSPQVLKLTDYFGQTAL 81 (558)
Q Consensus 6 ~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~----~~v~~Ll~~~~~~~~~~d~~g~TpL 81 (558)
.+++++||.|++.|+.+.++.++.... +...+..|+||||+|+..|+. +++++|++. |++++.+|..|.|||
T Consensus 4 ~~~~~~l~~Aa~~g~~~~~~~l~~~~~---~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~-Gadvn~~d~~g~TpL 79 (186)
T 3t8k_A 4 MSEYRTVSAAAMLGTYEDFLELFEKGY---EDKESVLKSNILYDVLRNNNDEARYKISMFLINK-GADIKSRTKEGTTLF 79 (186)
T ss_dssp HHHCSSHHHHHHHSCHHHHHHHHHHSS---SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHT-TCCSSCCCTTCCCTH
T ss_pred cccccHHHHHHHcCCHHHHHHHHhcCc---ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHC-CCCCCCCCCCCCcHH
Confidence 356789999999999999998887643 333236799999999999985 599999998 999999999999999
Q ss_pred HHHHHcCC------HHHHHHHHHcCcccccccCCCCCc-cHHHHHHHcCC-----hHHHHHHHh-cCc-cccCccchhHH
Q 046389 82 SLAAASGN------LDLVQLMTEDNEHLALDRESVDQY-LPIHAGAMSGH-----KEVVLYLYS-ITE-GQLDNKDLIEL 147 (558)
Q Consensus 82 h~A~~~g~------~eiv~~Ll~~~~~~~~~~~~~~g~-tpLh~A~~~g~-----~~~v~~Ll~-~~~-~~~~~~~~~t~ 147 (558)
|+|+..|+ .+++++|+++|+++ +.++ ..|. ||||+|+..+. .+++++|++ +|+ .+..+..|.||
T Consensus 80 h~a~~~~~~~~~~~~~iv~~Ll~~Gadi-n~~d-~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~Tp 157 (186)
T 3t8k_A 80 FPLFQGGGNDITGTTELCKIFLEKGADI-TALY-KPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTA 157 (186)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCCS-SSCB-GGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCH
T ss_pred HHHHHcCCcchhhHHHHHHHHHHCCCCC-CccC-CCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCH
Confidence 99999987 68999999999997 4566 7899 99999999554 568888888 777 66778888888
Q ss_pred HHHHHHhccHHHHHHHHhh
Q 046389 148 LIILIKTDLYEVALRLFKD 166 (558)
Q Consensus 148 l~~a~~~~~~~~~~~Ll~~ 166 (558)
||+|+..++.++++.|.+.
T Consensus 158 L~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 158 LEFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp HHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHH
Confidence 8888888888888777764
No 86
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.90 E-value=2.2e-23 Score=174.54 Aligned_cols=125 Identities=31% Similarity=0.413 Sum_probs=115.5
Q ss_pred CCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHH
Q 046389 7 STLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAA 86 (558)
Q Consensus 7 ~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~ 86 (558)
+|+||||.|+..|+.+++++|++. +.+++.. +..|.||||+|+..|+.+++++|++. +.+++.+|..|.||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~l~~A~~ 77 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEA-GADVNAK-DKNGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAAR 77 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHH-TCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHc-CCCCCCc-CCCCCcHHHHHHHcCcHHHHHHHHHc-CCCCcccCCCCCcHHHHHHH
Confidence 589999999999999999988886 5667766 88999999999999999999999998 89999999999999999999
Q ss_pred cCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc
Q 046389 87 SGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE 136 (558)
Q Consensus 87 ~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 136 (558)
.|+.+++++|+++|+++ ..++ ..|.||||+|+..|+.+++++|+++|+
T Consensus 78 ~~~~~~~~~Ll~~g~~~-~~~~-~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 78 NGHLEVVKLLLEAGADV-NAKD-KNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp TTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred cChHHHHHHHHHcCCCC-cccC-CCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 99999999999999986 4566 899999999999999999999999886
No 87
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.90 E-value=8.2e-24 Score=184.55 Aligned_cols=141 Identities=14% Similarity=0.090 Sum_probs=115.9
Q ss_pred CCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCcc-HHHH
Q 046389 40 SKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYL-PIHA 118 (558)
Q Consensus 40 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~t-pLh~ 118 (558)
+..|.||||+|+..|+.++|++|++. +.+++.+|..|.||||+|+ .|+.+++++|+++|+++ ..++ ..|.| |||+
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d-~~g~ttpL~~ 84 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEA-GANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCAD-PATLTRPVHD 84 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTT-TCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCC-TTTCCCHHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcC-CCCCcHHHHH
Confidence 67899999999999999999999998 8999999999999999985 99999999999999997 4566 78998 9999
Q ss_pred HHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHH
Q 046389 119 GAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHAL 185 (558)
Q Consensus 119 A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a 185 (558)
|+..|+.+++++|+++++ .+..+..|.||||.|+..++.++++.|++. +.+++.++..|.||.+-+
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAA-AGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSC-C-----------------
T ss_pred HHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHc-CCCCCccCcCcCcccccC
Confidence 999999999999999998 677889999999999999999999999987 788889999999998743
No 88
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.90 E-value=1.6e-23 Score=178.05 Aligned_cols=129 Identities=14% Similarity=0.127 Sum_probs=119.4
Q ss_pred hhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCC-
Q 046389 33 DYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVD- 111 (558)
Q Consensus 33 ~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~- 111 (558)
.+++.. +..|.||||+|+..|+.+++++|++. +.+++.+|..|.||||+|+. |+.+++++|+++|+++ ..++ ..
T Consensus 3 ~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~-~~~ 77 (136)
T 1d9s_A 3 PGIHML-GGSSDAGLATAAARGQVETVRQLLEA-GADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEP-NCAD-PAT 77 (136)
T ss_dssp CCCSCC-CCCCSCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCB-TTT
T ss_pred CCccCC-CCCCccHHHHHHHcCCHHHHHHHHHc-CCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcC-CCC
Confidence 355666 88999999999999999999999999 89999999999999999999 9999999999999997 4555 66
Q ss_pred CccHHHHHHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHHHHHhh
Q 046389 112 QYLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVALRLFKD 166 (558)
Q Consensus 112 g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 166 (558)
|.||||+|+..|+.+++++|+++++ .+..+..|.||||.|+..++.++++.|+++
T Consensus 78 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ 133 (136)
T 1d9s_A 78 LTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAA 133 (136)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 9999999999999999999999998 677888999999999999999999999986
No 89
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=2.9e-23 Score=186.24 Aligned_cols=114 Identities=24% Similarity=0.148 Sum_probs=100.9
Q ss_pred CCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHH
Q 046389 40 SKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAG 119 (558)
Q Consensus 40 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A 119 (558)
+..|.||||.|+..|+.++++.|++ +.+++.+|..|.||||+|+..|+.+++++|+++|++++...+ ..|+||||+|
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~~g~tpL~~A 117 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDM-RGGLTALHMA 117 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT--TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCS-SSSCCHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh--cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCCCCHHHHH
Confidence 4578999999999999999999999 788999999999999999999999999999999999865554 7899999999
Q ss_pred HHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCC
Q 046389 120 AMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKS 189 (558)
Q Consensus 120 ~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~ 189 (558)
+..|+.+++++|+++|+ +++.+|.+|.||||+|+..+
T Consensus 118 ~~~~~~~~v~~Ll~~ga---------------------------------~~~~~d~~g~tpl~~A~~~~ 154 (183)
T 3deo_A 118 AGYVRPEVVEALVELGA---------------------------------DIEVEDERGLTALELAREIL 154 (183)
T ss_dssp HHTTCHHHHHHHHHHTC---------------------------------CTTCCCTTSCCHHHHHHHHH
T ss_pred HhcCcHHHHHHHHHcCC---------------------------------CCcCCCCCCCCHHHHHHHhc
Confidence 99999999999988765 44567888888888887654
No 90
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=4.5e-23 Score=193.92 Aligned_cols=139 Identities=21% Similarity=0.088 Sum_probs=110.4
Q ss_pred CcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHc
Q 046389 8 TLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAAS 87 (558)
Q Consensus 8 g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~ 87 (558)
+.+++..++..|+.+.+..+ ...+.++ +..|.||||+|+..|+.++++.|++ +.+++.+|..|.||||+|+..
T Consensus 15 ~~~~~l~~~~~g~~~~~~~~-~~~~~~~----~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~ 87 (244)
T 3ui2_A 15 GAMEYLIEWKDGHSPSWVPS-SYIAADV----VSEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGL 87 (244)
T ss_dssp TEEEEEEEESSCCCCEEEEG-GGSCHHH----HHHHHHHHHHHHTTTCHHHHHHTTT--TCCTTCBCTTSCBHHHHHHHH
T ss_pred CccHHHHHHHcCCCcccccc-ccccccc----ccCCCCHHHHHHHcCCHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHC
Confidence 44455555555555554422 1222222 4568999999999999999999999 788999999999999999999
Q ss_pred CCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHHHhhC
Q 046389 88 GNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRLFKDH 167 (558)
Q Consensus 88 g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 167 (558)
|+.+++++|+++|++++...+ ..|.||||+|+..|+.+++++|+++|+
T Consensus 88 g~~~~v~~Ll~~ga~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~ga------------------------------- 135 (244)
T 3ui2_A 88 GSDKCVRLLAEAGADLDHRDM-RGGLTALHMAAGYVRPEVVEALVELGA------------------------------- 135 (244)
T ss_dssp TCHHHHHHHHHTTCCTTCCCS-SSCCCHHHHHHHTTCHHHHHHHHHTTC-------------------------------
T ss_pred CCHHHHHHHHHcCCCCCcCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCC-------------------------------
Confidence 999999999999999865554 789999999999999999999988765
Q ss_pred CcccccccCCCCcHHHHHhc
Q 046389 168 PQLATLRDSNEETALHALAG 187 (558)
Q Consensus 168 ~~~~~~~d~~g~t~L~~a~~ 187 (558)
+++.+|..|.||||+|+.
T Consensus 136 --~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 136 --DIEVEDERGLTALELARE 153 (244)
T ss_dssp --CTTCCCTTCCCHHHHHHH
T ss_pred --CCCCCCCCCCcHHHHHHH
Confidence 445677888888887774
No 91
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.88 E-value=6.7e-23 Score=183.87 Aligned_cols=140 Identities=20% Similarity=0.090 Sum_probs=126.5
Q ss_pred ccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCccccccc-CCCCcHhHH
Q 046389 5 EKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTD-YFGQTALSL 83 (558)
Q Consensus 5 d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~g~TpLh~ 83 (558)
|.+|.||||.|+..|+.+.++.|++ +.+++.. |..|.||||+|+..|+.+++++|++. +++++.+| ..|.||||+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~-d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~~g~tpL~~ 116 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE--DRDVDAV-DENGRTALLFVAGLGSDKCVRLLAEA-GADLDHRDMRGGLTALHM 116 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT--TSCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCSSSSCCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh--cCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCCHHHH
Confidence 5689999999999999999998887 6778877 88999999999999999999999999 89999998 889999999
Q ss_pred HHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHH
Q 046389 84 AAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRL 163 (558)
Q Consensus 84 A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L 163 (558)
|+..|+.+++++|+++|+++ ..++ ..|.||||+|+..++. ..+.++++.++..|..++++.|
T Consensus 117 A~~~~~~~~v~~Ll~~ga~~-~~~d-~~g~tpl~~A~~~~~~----------------~~~~~~l~~a~~~~~~~i~~~L 178 (183)
T 3deo_A 117 AAGYVRPEVVEALVELGADI-EVED-ERGLTALELAREILKT----------------TPKGNPMQFGRRIGLEKVINVL 178 (183)
T ss_dssp HHHTTCHHHHHHHHHHTCCT-TCCC-TTSCCHHHHHHHHHHT----------------CCCCSHHHHHHHHHHHHHHHHH
T ss_pred HHhcCcHHHHHHHHHcCCCC-cCCC-CCCCCHHHHHHHhccC----------------cccccHHHHHHHcCHHHHHHHH
Confidence 99999999999999999997 4667 8999999999986544 3456899999999999999998
Q ss_pred Hhh
Q 046389 164 FKD 166 (558)
Q Consensus 164 l~~ 166 (558)
.++
T Consensus 179 ~~~ 181 (183)
T 3deo_A 179 EGQ 181 (183)
T ss_dssp HTC
T ss_pred HHh
Confidence 764
No 92
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.88 E-value=1.9e-23 Score=177.88 Aligned_cols=129 Identities=19% Similarity=0.219 Sum_probs=106.2
Q ss_pred ccccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhH
Q 046389 3 CEEKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALS 82 (558)
Q Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh 82 (558)
.+|.+|+||||+|+..|+.++++.|++. +.+++.. |..|.||||+|+..|+.+++++|++. +++++.+|..|.||||
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~ 81 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQN-GSDPNVK-DHAGWTPLHEACNHGHLKVVELLLQH-KALVNTTGYQNDSPLH 81 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCGGGCCHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcC-CCCCCCHHHHHHHcCCHHHHHHHHHc-CCcccCcCCCCCCHHH
Confidence 3678889999999999999999877765 6677766 78899999999999999999999988 8888888989999999
Q ss_pred HHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc
Q 046389 83 LAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE 136 (558)
Q Consensus 83 ~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 136 (558)
+|+..|+.+++++|+++|+++ ..++ ..|.||||+|+..++.+++++|.+.+.
T Consensus 82 ~A~~~~~~~~v~~Ll~~ga~~-~~~~-~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 82 DAAKNGHVDIVKLLLSYGASR-NAVN-IFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT-TCCC-TTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred HHHHcCCHHHHHHHHHcCCCC-CCCC-CCCCCHHHHHhhccHHHHHhhcccccc
Confidence 999999999999999998886 4566 789999999988888888887766543
No 93
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.88 E-value=1.5e-22 Score=172.13 Aligned_cols=124 Identities=25% Similarity=0.234 Sum_probs=115.5
Q ss_pred CCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHH
Q 046389 40 SKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAG 119 (558)
Q Consensus 40 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A 119 (558)
...+.||||+|+..|+.+++++|++. +.+++.+|..|.||||+|+..|+.+++++|+++|+++ +..+ ..|.||||+|
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d-~~g~t~L~~A 87 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMAN-GADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVD-AIGFTPLHLA 87 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCC-TTCCCHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCC-CCCCCHHHHH
Confidence 56789999999999999999999999 8999999999999999999999999999999999987 4566 7999999999
Q ss_pred HHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHHHHHhh
Q 046389 120 AMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVALRLFKD 166 (558)
Q Consensus 120 ~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 166 (558)
+..|+.+++++|+++++ .+..+..|.||||.|+..++.++++.|++.
T Consensus 88 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 88 AFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred HHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 99999999999999998 666888999999999999999999999875
No 94
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.88 E-value=1.3e-22 Score=190.81 Aligned_cols=140 Identities=20% Similarity=0.091 Sum_probs=127.2
Q ss_pred ccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCccccccc-CCCCcHhHH
Q 046389 5 EKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTD-YFGQTALSL 83 (558)
Q Consensus 5 d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~g~TpLh~ 83 (558)
+.+|.||||.|+..|+.++++.|++ +.+++.+ |..|.||||+|+..|+.++|++|++. +++++.+| ..|.||||+
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~g~t~L~~ 117 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE--DRDVDAV-DENGRTALLFVAGLGSDKCVRLLAEA-GADLDHRDMRGGLTALHM 117 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT--TCCTTCB-CTTSCBHHHHHHHHTCHHHHHHHHHT-TCCTTCCCSSSCCCHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc--CCCCCCc-CCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCcCCCCCCCCHHHH
Confidence 4579999999999999999998887 6778877 89999999999999999999999999 99999998 889999999
Q ss_pred HHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccHHHHHHH
Q 046389 84 AAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLYEVALRL 163 (558)
Q Consensus 84 A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L 163 (558)
|+..|+.+++++|+++|+++ +.++ ..|.||||+|+..++ ...+.+|+++|+..|+.++++.|
T Consensus 118 A~~~g~~~~v~~Ll~~ga~~-~~~d-~~g~t~l~~A~~~~~----------------~~~~~~~l~~a~~~g~~~iv~~L 179 (244)
T 3ui2_A 118 AAGYVRPEVVEALVELGADI-EVED-ERGLTALELAREILK----------------TTPKGNPMQFGRRIGLEKVINVL 179 (244)
T ss_dssp HHHTTCHHHHHHHHHTTCCT-TCCC-TTCCCHHHHHHHHHT----------------TCCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCC-CCCC-CCCCcHHHHHHHHHh----------------ccCCCCHHHHHHHcChHHHHHHH
Confidence 99999999999999999997 4566 899999999986333 25678999999999999999999
Q ss_pred Hhh
Q 046389 164 FKD 166 (558)
Q Consensus 164 l~~ 166 (558)
++.
T Consensus 180 ~~~ 182 (244)
T 3ui2_A 180 EGQ 182 (244)
T ss_dssp HHH
T ss_pred HHh
Confidence 986
No 95
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.87 E-value=2.2e-22 Score=167.81 Aligned_cols=117 Identities=18% Similarity=0.167 Sum_probs=97.3
Q ss_pred ccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHH
Q 046389 5 EKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLA 84 (558)
Q Consensus 5 d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A 84 (558)
+..|.||||+|+..|+.+.++.|++. +.+++.. |..|.||||+|+..|+.+++++|++. +++++.+|..|.||||+|
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~-~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~tpL~~A 80 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAK-GEDVNRT-LEGGRKPLHYAADCGQLEILEFLLLK-GADINAPDKHHITPLLSA 80 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHT-TCCTTSC-CTTSSCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCTTSCCHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHc-CCCcCcc-CCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHHH
Confidence 45688999999999999999988775 5667776 88899999999999999999999988 888999999999999999
Q ss_pred HHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChH
Q 046389 85 AASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKE 126 (558)
Q Consensus 85 ~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~ 126 (558)
+..|+.+++++|+++|+++ ..++ ..|.||||+|...+..+
T Consensus 81 ~~~~~~~~v~~Ll~~ga~~-~~~~-~~g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 81 VYEGHVSCVKLLLSKGADK-TVKG-PDGLTAFEATDNQAIKA 120 (123)
T ss_dssp HHHTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHCCCHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCC-CCcC-CCCCCHHHHhCCHHHHH
Confidence 9999999999999999886 4566 88999999985444333
No 96
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.87 E-value=9.8e-22 Score=164.43 Aligned_cols=123 Identities=30% Similarity=0.384 Sum_probs=115.2
Q ss_pred CCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHH
Q 046389 42 LGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAM 121 (558)
Q Consensus 42 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~ 121 (558)
+|.||||.|+..|+.+++++|++. +.+++.+|..|.||||+|+..|+.+++++|+++|+++ ..++ ..|.||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~-~~g~t~l~~A~~ 77 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKD-KNGRTPLHLAAR 77 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccC-CCCCcHHHHHHH
Confidence 589999999999999999999998 8899999999999999999999999999999999986 4566 799999999999
Q ss_pred cCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHHHHHhhC
Q 046389 122 SGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVALRLFKDH 167 (558)
Q Consensus 122 ~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 167 (558)
.|+.+++++|+++++ .+..+..|.||++.|+..++.++++.|++++
T Consensus 78 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 124 (126)
T 1n0r_A 78 NGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 124 (126)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred cChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 999999999999998 5667889999999999999999999999873
No 97
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.86 E-value=2.4e-22 Score=186.32 Aligned_cols=129 Identities=22% Similarity=0.207 Sum_probs=103.1
Q ss_pred cccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHH
Q 046389 4 EEKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSL 83 (558)
Q Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~ 83 (558)
.|.+|.||||+|+..|+.++++.|++. +.+++.+ |..|.||||+|+..|+.++|++|++..+++++.+|..|.||||+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~ 146 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDN-RVGVNGL-DKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHA 146 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHT-TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhC-CCCcccc-CCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHH
Confidence 456778899999999999988877764 6667766 78888999999999999999998887688888888889999999
Q ss_pred HHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc
Q 046389 84 AAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE 136 (558)
Q Consensus 84 A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 136 (558)
|+..|+.+++++|+++|+++ ..++ ..|.||||+|+..|+.++++.|++.++
T Consensus 147 A~~~~~~~~v~~Ll~~ga~~-~~~~-~~g~t~l~~A~~~~~~~~l~~l~~~~~ 197 (222)
T 3ehr_A 147 AAWKGYADIVQLLLAKGART-DLRN-IEKKLAFDMATNAACASLLKKKQGTDA 197 (222)
T ss_dssp HHHHTCHHHHHHHHHHTCCS-CCCC-TTSCCHHHHCCSHHHHHHHC-------
T ss_pred HHHcCCHHHHHHHHHcCCCC-cccc-CCCCCHHHHhcchhHHHHHHHHhccch
Confidence 99999999999999988886 4566 788899999988888888888888876
No 98
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.86 E-value=2.3e-22 Score=171.22 Aligned_cols=123 Identities=25% Similarity=0.245 Sum_probs=106.2
Q ss_pred CCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHH
Q 046389 40 SKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAG 119 (558)
Q Consensus 40 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A 119 (558)
|..|.||||+|+..|+.+++++|++. +.+++.+|..|.||||+|+..|+.+++++|+++|+++ ..++ ..|.||||+|
T Consensus 7 ~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~-~~g~t~L~~A 83 (137)
T 3c5r_A 7 NHRGETLLHIASIKGDIPSVEYLLQN-GSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV-NTTG-YQNDSPLHDA 83 (137)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-GGGCCHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcC-CCCCCHHHHH
Confidence 78999999999999999999999998 8999999999999999999999999999999999986 4566 7899999999
Q ss_pred HHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHHHHHh
Q 046389 120 AMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVALRLFK 165 (558)
Q Consensus 120 ~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~ 165 (558)
+..|+.+++++|+++++ .+..+..|.||+++|+..+..++++.+.+
T Consensus 84 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 84 AKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccc
Confidence 99999999999999887 55566677777777776666666555444
No 99
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.86 E-value=6.3e-22 Score=191.67 Aligned_cols=140 Identities=17% Similarity=0.067 Sum_probs=77.9
Q ss_pred CCchHHHHHHHCCCHHHHHHHhcCCCccccc------ccCCCCcHhHHHHHc---CCHHHHHHHHHcCcccccccCCCCC
Q 046389 42 LGETALHVAASAGRIDFVKNLLGYSPQVLKL------TDYFGQTALSLAAAS---GNLDLVQLMTEDNEHLALDRESVDQ 112 (558)
Q Consensus 42 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~------~d~~g~TpLh~A~~~---g~~eiv~~Ll~~~~~~~~~~~~~~g 112 (558)
.+.++||.|+..|+.+.++.|++. +.+++. .|..|.||||+|+.. |+.+++++|+++|+++ +..+ ..|
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~-g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d-~~G 226 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKA-ADG 226 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHT-TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCC-TTC
T ss_pred chHHHHhhhhhccCHHHHHHHHhc-CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCC-CCC
Confidence 344566666666666666666655 555554 455566666666654 5566666666666654 2344 566
Q ss_pred ccHHHHHHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCCCc
Q 046389 113 YLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKSMM 191 (558)
Q Consensus 113 ~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~~~ 191 (558)
.||||+|+..|+.+++++|+++|+ .+..+..|.|||+.|+..++.++++.|++.+ . ..|.||||+|+..|+.
T Consensus 227 ~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~g-a------~~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 227 NTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQ-A------GTFAFPLHVDYSWVIS 299 (301)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHH-H------HTTSSCCC--------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhc-C------CCCCChhHHHHhcCCc
Confidence 666666666666666666666655 4455556666666666666666666666541 1 1577888888877753
No 100
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.85 E-value=1.6e-21 Score=162.59 Aligned_cols=111 Identities=17% Similarity=0.216 Sum_probs=95.8
Q ss_pred CCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHH
Q 046389 40 SKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAG 119 (558)
Q Consensus 40 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A 119 (558)
+..|.||||.|+..|+.+++++|++. +.+++.+|..|.||||+|+..|+.+++++|+++|+++ +.++ ..|+||||+|
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d-~~g~tpL~~A 80 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAK-GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPD-KHHITPLLSA 80 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHT-TCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCC-TTSCCHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHc-CCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCC-CCCCCHHHHH
Confidence 56789999999999999999999998 8899999999999999999999999999999999997 4566 8999999999
Q ss_pred HHcCChHHHHHHHhcCc-cccCccchhHHHHHHHH
Q 046389 120 AMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIK 153 (558)
Q Consensus 120 ~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~ 153 (558)
+..|+.+++++|+++++ .+..+..|.||++.|..
T Consensus 81 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 81 VYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 99999999999999887 44455566666666543
No 101
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.84 E-value=2.3e-21 Score=179.63 Aligned_cols=133 Identities=20% Similarity=0.215 Sum_probs=112.2
Q ss_pred CCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHc-CcccccccCCCCCccHHHH
Q 046389 40 SKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTED-NEHLALDRESVDQYLPIHA 118 (558)
Q Consensus 40 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~-~~~~~~~~~~~~g~tpLh~ 118 (558)
+..|.||||+|+..|+.+++++|++. +.+++.+|..|.||||+|+..|+.+++++|+++ |+++ +..+ ..|.||||+
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d-~~g~tpL~~ 146 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDN-RVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQN-KLGDTALHA 146 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCC-TTSCCHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhC-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccC-CCCCCHHHH
Confidence 66789999999999999999999998 899999999999999999999999999999999 8886 5566 899999999
Q ss_pred HHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccC
Q 046389 119 GAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDS 176 (558)
Q Consensus 119 A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~ 176 (558)
|+..|+.+++++|+++|+ .+..+..|.|||+.|+..++.++++.++.. +.....++.
T Consensus 147 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~-~~~~~~~~~ 204 (222)
T 3ehr_A 147 AAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGT-DAVRTLSNA 204 (222)
T ss_dssp HHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC---------------
T ss_pred HHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhcc-chhhhccch
Confidence 999999999999999998 677889999999999999999999999887 444344433
No 102
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.83 E-value=1.1e-20 Score=182.87 Aligned_cols=141 Identities=17% Similarity=0.121 Sum_probs=118.1
Q ss_pred CcHHHHHHHHcCCHHHHHHHHhhCchhhhhh-----cCCCCchHHHHHHHC---CCHHHHHHHhcCCCcccccccCCCCc
Q 046389 8 TLSKLYRAALDDDWQTAETIFESHEDYVKAS-----LSKLGETALHVAASA---GRIDFVKNLLGYSPQVLKLTDYFGQT 79 (558)
Q Consensus 8 g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~-----~~~~g~t~Lh~Aa~~---g~~~~v~~Ll~~~~~~~~~~d~~g~T 79 (558)
+.++|+.|+..|+.+.++.++.. +.+++.. .+..|.||||+|+.. |+.+++++|++. +++++.+|..|+|
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~-g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~-gadvn~~d~~G~T 228 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-GGHLDAKAADGNT 228 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHT-TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHH-SSCTTCCCTTCCC
T ss_pred hHHHHhhhhhccCHHHHHHHHhc-CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhc-CCCCCCCCCCCCC
Confidence 45789999999999999988865 5666652 378899999999997 899999999998 8999999999999
Q ss_pred HhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCccccCccchhHHHHHHHHhccH
Q 046389 80 ALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITEGQLDNKDLIELLIILIKTDLY 157 (558)
Q Consensus 80 pLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~t~l~~a~~~~~~ 157 (558)
|||+|+..|+.+++++|+++|+++ ..++ ..|.||||+|+..|+.+++++|+++++. .|.||||.|+..|+.
T Consensus 229 pLh~A~~~g~~~~v~~Ll~~gad~-~~~d-~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-----~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 229 ALHYAALYNQPDCLKLLLKGRALV-GTVN-EAGETALDIARKKHHKECEELLEQAQAG-----TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCC-SCCC-TTSCCHHHHHHHHTCHHHHHHHHHHHHH-----TTSSCCC--------
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCC-CCcC-CCCCCHHHHHHHcCCHHHHHHHHHhcCC-----CCCChhHHHHhcCCc
Confidence 999999999999999999999997 4666 8999999999999999999999998873 578999999988754
No 103
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.83 E-value=1.5e-20 Score=148.05 Aligned_cols=92 Identities=35% Similarity=0.486 Sum_probs=67.2
Q ss_pred CCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHH
Q 046389 42 LGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAM 121 (558)
Q Consensus 42 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~ 121 (558)
+|+||||+|+..|+.+++++|++. +.+++.+|..|.||||+|+..|+.+++++|+++|+++ ..++ ..|.||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d-~~g~t~l~~A~~ 77 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKD-KNGRTPLHLAAR 77 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccC-CCCCCHHHHHHH
Confidence 367777777777777777777776 6777777777777777777777777777777777775 3455 677777777777
Q ss_pred cCChHHHHHHHhcCc
Q 046389 122 SGHKEVVLYLYSITE 136 (558)
Q Consensus 122 ~g~~~~v~~Ll~~~~ 136 (558)
.|+.+++++|+++|+
T Consensus 78 ~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 78 NGHLEVVKLLLEAGA 92 (93)
T ss_dssp TTCHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHcCC
Confidence 777777777777664
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.82 E-value=6.3e-20 Score=175.54 Aligned_cols=206 Identities=18% Similarity=0.097 Sum_probs=148.9
Q ss_pred ccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc--cccCccchhHHHHH
Q 046389 73 TDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE--GQLDNKDLIELLII 150 (558)
Q Consensus 73 ~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~--~~~~~~~~~t~l~~ 150 (558)
.|..+.++++.+...|+..+.+++...-+.....+. ..+.... .....-..+++..... .........++|+.
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP-~~~s~~~----~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~ 136 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKP-NPGSDMI----ARKDYITAKYMERRYARKKHADTAAKLHSLCE 136 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSC-CTTCCHH----HHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCC-CCCCCHH----HHHHHHHHHHHHhhcccccccccchhhhhhhh
Confidence 567788899999998988777766544332111111 1111221 1122222334433332 22233445678999
Q ss_pred HHHhccHHHHHHHHhhCCcc-----cccccCCCCcHHHHHhcCCCchhhhhhhcccchhhhhhcccccccccchhhhHHH
Q 046389 151 LIKTDLYEVALRLFKDHPQL-----ATLRDSNEETALHALAGKSMMSSYLANQNQQGMLQNFFSSANVGSTKLSLSHAVL 225 (558)
Q Consensus 151 a~~~~~~~~~~~Ll~~~~~~-----~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~ 225 (558)
|+..++.+.+..++..+... .+..|..|.||||+|+..++.
T Consensus 137 a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~---------------------------------- 182 (278)
T 1dcq_A 137 AVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDR---------------------------------- 182 (278)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCT----------------------------------
T ss_pred HhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhccc----------------------------------
Confidence 99999999999888874432 334588899999999987421
Q ss_pred HHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHH
Q 046389 226 EQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIREYPYIISKHDDMGRTMFHIAVLNHQVKILE 305 (558)
Q Consensus 226 ~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~ 305 (558)
++.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|+++|+++ +.+|.+|+||||+|+..|+.++++
T Consensus 183 -~~~~~v~~Ll~~ga~in~~d-----~~g~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~~~~~~v~ 255 (278)
T 1dcq_A 183 -TSLHIVDFLVQNSGNLDKQT-----GKGSTALHYCCLTDNAECLKLLLRGKASI-EIANESGETPLDIAKRLKHEHCEE 255 (278)
T ss_dssp -TTHHHHHHHHHHCSCTTCCC-----TTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred -chHHHHHHHHHCCCCccccC-----CCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCccCCCCCHHHHHHHcCCHHHHH
Confidence 23489999999998876544 78999999999999999999999999998 999999999999999999999999
Q ss_pred HHHhcCCcccceeeeccCCCCchhhHhhcCC
Q 046389 306 LINEMGSMKDRIVSRRDYGGNNILHMAGMQP 336 (558)
Q Consensus 306 ~Ll~~ga~~~~~in~~d~~g~TpLh~A~~~~ 336 (558)
+|+++|++ ++++|.++...
T Consensus 256 ~Ll~~ga~------------~~~~~~~v~~~ 274 (278)
T 1dcq_A 256 LLTQALSG------------RFNSHVHVEYE 274 (278)
T ss_dssp HHHHHHTT------------CCCSSCCCCCC
T ss_pred HHHHcCCC------------CCCcceeeecc
Confidence 99999875 56777776543
No 105
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.82 E-value=3.5e-20 Score=183.41 Aligned_cols=124 Identities=19% Similarity=0.144 Sum_probs=87.7
Q ss_pred CcHHHHHHHHc-CCHHHHHHHHhhCchhhhhhcC--CCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHH
Q 046389 8 TLSKLYRAALD-DDWQTAETIFESHEDYVKASLS--KLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLA 84 (558)
Q Consensus 8 g~t~L~~A~~~-g~~~~v~~ll~~~~~~~~~~~~--~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A 84 (558)
+.|+||.|+.. |+.++++.|++. +.+++.. + ..|.||||+|+..|+.++|++|++. +++++.+|..|.||||+|
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~-Gadvn~~-~~~~~g~TpLh~Aa~~g~~~iv~~LL~~-Gadvn~~d~~G~TpLh~A 275 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAH-GADVNWV-NGGQDNATPLIQATAANSLLACEFLLQN-GANVNQADSAGRGPLHHA 275 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHT-TCCTTCC-CTTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHc-CCCCCcc-ccccCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHH
Confidence 45677777777 777777766654 5566655 4 6677777777777777777777776 777777777777777777
Q ss_pred HHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc
Q 046389 85 AASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE 136 (558)
Q Consensus 85 ~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 136 (558)
+..|+.+++++|+++|+++ ...+ ..|.||||+|+..|+.+++++|++.+.
T Consensus 276 ~~~g~~~~v~~LL~~Gad~-~~~d-~~G~TpL~~A~~~g~~~iv~lLl~~~~ 325 (368)
T 3jue_A 276 TILGHTGLACLFLKRGADL-GARD-SEGRDPLTIAMETANADIVTLLRLAKM 325 (368)
T ss_dssp HHHTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHcCcHHHHHHHHHCcCCC-CCcC-CCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 7777777777777777775 3455 677777777777777777777776554
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.82 E-value=4.2e-20 Score=145.50 Aligned_cols=93 Identities=32% Similarity=0.406 Sum_probs=86.2
Q ss_pred CCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHH
Q 046389 7 STLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAA 86 (558)
Q Consensus 7 ~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~ 86 (558)
+|+||||+|+..|+.++++.|++. +.+++.+ |..|+||||+|+..|+.+++++|++. +++++.+|.+|.||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~n~~-d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~t~l~~A~~ 77 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEA-GADVNAK-DKNGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAAR 77 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT-TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHc-CCCCccc-CCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHH
Confidence 589999999999999999988765 7788887 89999999999999999999999998 99999999999999999999
Q ss_pred cCCHHHHHHHHHcCcc
Q 046389 87 SGNLDLVQLMTEDNEH 102 (558)
Q Consensus 87 ~g~~eiv~~Ll~~~~~ 102 (558)
.|+.+++++|+++|++
T Consensus 78 ~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 78 NGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TTCHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHcCCC
Confidence 9999999999999874
No 107
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.82 E-value=5.4e-20 Score=175.98 Aligned_cols=125 Identities=18% Similarity=0.136 Sum_probs=97.9
Q ss_pred CcHHHHHHHHcCCHHHHHHHHhhCchhhhhh-----cCCCCchHHHHHHHC---CCHHHHHHHhcCCCcccccccCCCCc
Q 046389 8 TLSKLYRAALDDDWQTAETIFESHEDYVKAS-----LSKLGETALHVAASA---GRIDFVKNLLGYSPQVLKLTDYFGQT 79 (558)
Q Consensus 8 g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~-----~~~~g~t~Lh~Aa~~---g~~~~v~~Ll~~~~~~~~~~d~~g~T 79 (558)
..++|+.|+..|+.+.++.++.. +.+++.. .+..|.||||+|+.. |+.+++++|++. +++++.+|..|.|
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~-g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~-ga~in~~d~~g~T 207 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYAD-GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQN-SGNLDKQTGKGST 207 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHT-TCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHH-CSCTTCCCTTCCC
T ss_pred hhhhhhhHhhhcccHHHHHHHHh-hcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHC-CCCccccCCCCCC
Confidence 35678888888888888877766 3333221 166788888888888 788888888887 7888888888888
Q ss_pred HhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc
Q 046389 80 ALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE 136 (558)
Q Consensus 80 pLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 136 (558)
|||+|+..|+.+++++|+++|+++ ..++ ..|.||||+|+..|+.+++++|+++++
T Consensus 208 pLh~A~~~g~~~~v~~Ll~~gad~-~~~d-~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 208 ALHYCCLTDNAECLKLLLRGKASI-EIAN-ESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCC-CCcc-CCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 888888888888888888888886 4556 788888888888888888888888776
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.79 E-value=2.6e-19 Score=186.19 Aligned_cols=124 Identities=18% Similarity=0.146 Sum_probs=99.2
Q ss_pred cHHHHHHHHcCCHHHHHHHHhhCchhhhhh-----cCCCCchHHHHHHH---CCCHHHHHHHhcCCCcccccccCCCCcH
Q 046389 9 LSKLYRAALDDDWQTAETIFESHEDYVKAS-----LSKLGETALHVAAS---AGRIDFVKNLLGYSPQVLKLTDYFGQTA 80 (558)
Q Consensus 9 ~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~-----~~~~g~t~Lh~Aa~---~g~~~~v~~Ll~~~~~~~~~~d~~g~Tp 80 (558)
.+.||.|+..|+.+.++.|++. +.+++.. .+..|.||||+||. .|+.++|++|++. |+++|.+|.+|+||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~-g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~-ga~vn~~d~~g~Tp 210 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-GGHLDAKAADGNTA 210 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT-TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHH-SCCTTCCCSSSCCH
T ss_pred HHHHHHHHhccCHHHHHHHHhh-cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHc-CCCCCccCCCCCcH
Confidence 3678888888888888877766 4555433 25678888888865 7888888888887 78888888888888
Q ss_pred hHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc
Q 046389 81 LSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE 136 (558)
Q Consensus 81 Lh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 136 (558)
||+|+..|+.+++++|+++|+++ +.++ ..|.||||+|+..|+.+++++|+++|+
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~~-~~~d-~~g~tpl~~A~~~~~~~~~~~Ll~~ga 264 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRALV-GTVN-EAGETALDIARKKHHKECEELLEQAQA 264 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCCC-SCCC-TTCCCHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC-CCcC-CCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence 88888888888888888888886 4556 788888888888888888888888887
No 109
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.78 E-value=5.5e-20 Score=151.15 Aligned_cols=108 Identities=22% Similarity=0.258 Sum_probs=96.3
Q ss_pred hccCCchHHHHHHhcChHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhcCCcccceeeeccCCCCchh
Q 046389 250 LIERPFQLTFVAAEKGNIEFLRVLIREYPYIISKHDDMGRTMFHIAVLNHQVKILELINEMGSMKDRIVSRRDYGGNNIL 329 (558)
Q Consensus 250 ~~~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ga~~~~~in~~d~~g~TpL 329 (558)
.|.+|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..++.+++++|+++|++ ++.+|..|+|||
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~d~~g~tpl 79 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD----VNARSKDGNTPE 79 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC----TTCCCTTCCCTT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC----CcccCCCCCCHH
Confidence 4678999999999999999999999999998 89999999999999999999999999999999 779999999999
Q ss_pred hHhhcCCCCCCCccccchHHHHHHHHHHHHHHHhhcCCcchhhccCCCCChh
Q 046389 330 HMAGMQPSNEGPNVVFGAVLQLQQEVLWFKKVSEIVRPVDAEARNYGLQTPR 381 (558)
Q Consensus 330 h~A~~~~~~~~~~~l~~~~l~~~~~~~~~~~v~~l~~~~~~~~~n~~g~tpl 381 (558)
|+|+..++.+++++| +..|++++.++..|.||-
T Consensus 80 ~~A~~~~~~~~~~~L-------------------l~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 80 HLAKKNGHHEIVKLL-------------------DAKGADVNARSWGSSHHH 112 (115)
T ss_dssp HHHHTTTCHHHHHHH-------------------HTTSSSHHHHSCCCC---
T ss_pred HHHHHCCCHHHHHHH-------------------HHcCCCCCcCCccccccc
Confidence 999999986554444 348999999999999984
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.78 E-value=1.9e-19 Score=147.91 Aligned_cols=107 Identities=25% Similarity=0.282 Sum_probs=64.8
Q ss_pred cccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHH
Q 046389 4 EEKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSL 83 (558)
Q Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~ 83 (558)
+|.+|+||||+|+..|+.++++.|++. +.+++.. |..|.||||+|+..|+.+++++|++. +++++.+|..|.||||+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~-d~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~d~~g~tpl~~ 81 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSK-GADVNAR-SKDGNTPLHLAAKNGHAEIVKLLLAK-GADVNARSKDGNTPEHL 81 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTT-TCCSSCC-CSSSCCTTHHHHTTTCHHHHHHHTTT-TCCTTCCCTTCCCTTHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCc-CCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCcccCCCCCCHHHH
Confidence 456666666666666666666655543 4455554 56666666666666666666666666 66666666666666666
Q ss_pred HHHcCCHHHHHHHHHcCcccccccCCCCCccH
Q 046389 84 AAASGNLDLVQLMTEDNEHLALDRESVDQYLP 115 (558)
Q Consensus 84 A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tp 115 (558)
|+..|+.+++++|+++|++++ .++ ..|.+|
T Consensus 82 A~~~~~~~~~~~Ll~~ga~~n-~~~-~~~~~~ 111 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAKGADVN-ARS-WGSSHH 111 (115)
T ss_dssp HHTTTCHHHHHHHHTTSSSHH-HHS-CCCC--
T ss_pred HHHCCCHHHHHHHHHcCCCCC-cCC-cccccc
Confidence 666666666666666666653 333 455544
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.78 E-value=7.3e-19 Score=173.96 Aligned_cols=146 Identities=14% Similarity=0.113 Sum_probs=115.9
Q ss_pred CCCchHHHHHHHC-CCHHHHHHHhcCCCccccccc--CCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHH
Q 046389 41 KLGETALHVAASA-GRIDFVKNLLGYSPQVLKLTD--YFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIH 117 (558)
Q Consensus 41 ~~g~t~Lh~Aa~~-g~~~~v~~Ll~~~~~~~~~~d--~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh 117 (558)
..+.|+||.|+.. |+.++++.|++. +++++..| ..|.||||+|+..|+.+++++|+++|++++ ..+ ..|.||||
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~-Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn-~~d-~~G~TpLh 273 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAH-GADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVN-QAD-SAGRGPLH 273 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHT-TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCC-TTSCCHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHc-CCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-CCC-CCCCCHHH
Confidence 3567899999999 999999999998 89999998 899999999999999999999999999974 566 89999999
Q ss_pred HHHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHHHHHhhCCc--ccccccCCCCcHHHHHhcCC
Q 046389 118 AGAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVALRLFKDHPQ--LATLRDSNEETALHALAGKS 189 (558)
Q Consensus 118 ~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~--~~~~~d~~g~t~L~~a~~~~ 189 (558)
+|+..|+.+++++|+++++ .+..+..|.||||+|+..++.++++.|+..... .....+..+.|+++.+....
T Consensus 274 ~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 274 HATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred HHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 9999999999999999999 777899999999999999999999999986322 22345566788888665543
No 112
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.76 E-value=2.3e-18 Score=179.01 Aligned_cols=138 Identities=17% Similarity=0.056 Sum_probs=114.2
Q ss_pred CCchHHHHHHHCCCHHHHHHHhcCCCcccccc------cCCCCcHhHHHHH---cCCHHHHHHHHHcCcccccccCCCCC
Q 046389 42 LGETALHVAASAGRIDFVKNLLGYSPQVLKLT------DYFGQTALSLAAA---SGNLDLVQLMTEDNEHLALDRESVDQ 112 (558)
Q Consensus 42 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~------d~~g~TpLh~A~~---~g~~eiv~~Ll~~~~~~~~~~~~~~g 112 (558)
...+.||.|+..|+.+.|+.|++. +++++.+ |..|.||||+|+. .|+.+++++|+++|+++ +.++ ..|
T Consensus 131 ~~~~~L~~A~~~g~~~~v~~ll~~-g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d-~~g 207 (497)
T 3lvq_E 131 PEPQRLWTAICNRDLLSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKA-ADG 207 (497)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHHHT-TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCC-SSS
T ss_pred ccHHHHHHHHhccCHHHHHHHHhh-cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccC-CCC
Confidence 345789999999999999999999 8888877 8899999999976 99999999999999997 4566 899
Q ss_pred ccHHHHHHHcCChHHHHHHHhcCc-cccCccchhHHHHHHHHhccHHHHHHHHhhCCcccccccCCCCcHHHHHhcCC
Q 046389 113 YLPIHAGAMSGHKEVVLYLYSITE-GQLDNKDLIELLIILIKTDLYEVALRLFKDHPQLATLRDSNEETALHALAGKS 189 (558)
Q Consensus 113 ~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~a~~~~ 189 (558)
+||||+|+..|+.++|++|+++|+ .+..+..|.||||+|+..|+.++++.|++. +++++ .+|+|.+...+
T Consensus 208 ~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~-ga~~~------~~~~h~~~~~~ 278 (497)
T 3lvq_E 208 NTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQA-QAGTF------AFPLHVDYSWV 278 (497)
T ss_dssp CCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHT-CC--------------------
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHh-CCCCC------CCcceeecccc
Confidence 999999999999999999999999 778899999999999999999999999997 44433 36888766543
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.72 E-value=1.1e-17 Score=135.99 Aligned_cols=89 Identities=25% Similarity=0.257 Sum_probs=81.2
Q ss_pred CCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCHHHHHHHHHcCcccccccCCCCCccHHHHH
Q 046389 40 SKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNLDLVQLMTEDNEHLALDRESVDQYLPIHAG 119 (558)
Q Consensus 40 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~g~tpLh~A 119 (558)
+.+|.||||+|+..|+.+++++|++. +++++.+|..|.||||+|+..|+.+++++|+++|+++ ..++ ..|.||||+|
T Consensus 21 ~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d-~~g~tpl~~A 97 (110)
T 2zgd_A 21 GSDLGKKLLEAARAGQDDEVRILMAN-GADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV-XAQD-KFGKTAFDIS 97 (110)
T ss_dssp -CCHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHH
T ss_pred CCccchHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccc-cCCCcHHHHH
Confidence 78899999999999999999999998 8899999999999999999999999999999999986 4566 7999999999
Q ss_pred HHcCChHHHHHH
Q 046389 120 AMSGHKEVVLYL 131 (558)
Q Consensus 120 ~~~g~~~~v~~L 131 (558)
+..|+.+++++|
T Consensus 98 ~~~~~~~~~~~L 109 (110)
T 2zgd_A 98 IDNGNEDLAEIL 109 (110)
T ss_dssp HHHTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 999999999887
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.69 E-value=6.3e-17 Score=131.50 Aligned_cols=91 Identities=30% Similarity=0.367 Sum_probs=83.4
Q ss_pred ccccCCcHHHHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhH
Q 046389 3 CEEKSTLSKLYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALS 82 (558)
Q Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh 82 (558)
..|.+|.|+||+|+..|+.++++.|++. +.+++.+ |..|+||||+|+..|+.+++++|++. +++++.+|..|.||||
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~i~~~-d~~g~tpLh~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~ 95 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMAN-GADVAAK-DKNGSTPLHLAARNGHLEVVKLLLEA-GADVXAQDKFGKTAFD 95 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHc-CCCCCcc-CCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccccCCCcHHH
Confidence 4578899999999999999999988865 7788877 88999999999999999999999999 9999999999999999
Q ss_pred HHHHcCCHHHHHHH
Q 046389 83 LAAASGNLDLVQLM 96 (558)
Q Consensus 83 ~A~~~g~~eiv~~L 96 (558)
+|+..|+.+++++|
T Consensus 96 ~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 96 ISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHh
Confidence 99999999999987
No 115
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=89.77 E-value=2.3 Score=41.03 Aligned_cols=188 Identities=8% Similarity=0.038 Sum_probs=108.2
Q ss_pred ccccCCcHHHHHHHHcCCHHHHHHHHhhC-chhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcC-CCcc-cccccCCCCc
Q 046389 3 CEEKSTLSKLYRAALDDDWQTAETIFESH-EDYVKASLSKLGETALHVAASAGRIDFVKNLLGY-SPQV-LKLTDYFGQT 79 (558)
Q Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~-~~~~-~~~~d~~g~T 79 (558)
+.|..|.-.|......++.+..+.++.+- +..+.-..|+.|+..+-.....|+.+....+++. .|.. --..|..|..
T Consensus 32 a~dq~gsR~lQ~~l~~~~~~~~~~i~~ei~~~~~~L~~d~~gn~vvQklle~~~~~~~~~i~~~i~g~~~~l~~~~~G~r 111 (351)
T 3gvo_A 32 SQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCR 111 (351)
T ss_dssp HTSHHHHHHHHHHHHHCCHHHHHHHHHHHGGGHHHHHTSTTHHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHTSTTHHH
T ss_pred hcCCcchHHHHHHHhhCCHHHHHHHHHHHHHhHHHHHhChhhhHHHHHHHhhCCHHHHHHHHHHHHhhHHHHhhCHHhHH
Confidence 45666667777778888877777666542 2233334488899999888888888877777762 1221 2235666777
Q ss_pred HhHHHHHcCCHHHHHHHHHc--CcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc----cccCccchhHHHHHHHH
Q 046389 80 ALSLAAASGNLDLVQLMTED--NEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE----GQLDNKDLIELLIILIK 153 (558)
Q Consensus 80 pLh~A~~~g~~eiv~~Ll~~--~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~----~~~~~~~~~t~l~~a~~ 153 (558)
.+.-+......+-...+++. +.-.....+ ..|...+......+..+..+.+++.-. .-.....|...+..+..
T Consensus 112 vvQk~le~~~~~~~~~i~~el~~~~~~L~~d-~~Gn~ViQk~l~~~~~~~~~~i~~~~~~~~~~ls~~~~G~~Vvq~~le 190 (351)
T 3gvo_A 112 VIQKALESISSDQQSEMVKELDGHVLKCVKD-QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILE 190 (351)
T ss_dssp HHHHHHHHSCHHHHHHHHGGGTTCHHHHHHS-TTHHHHHHHHHHHSCGGGTHHHHHHTTTTHHHHHTSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHhhhhHHHHHHh-hhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCcHhHHHHHHHHH
Confidence 77777766665544444432 111122344 677766666666666555455544332 22245667777666666
Q ss_pred hccHHHHHHHHhh--CCcccccccCCCCcHHHHHhcCCCc
Q 046389 154 TDLYEVALRLFKD--HPQLATLRDSNEETALHALAGKSMM 191 (558)
Q Consensus 154 ~~~~~~~~~Ll~~--~~~~~~~~d~~g~t~L~~a~~~~~~ 191 (558)
....+....+++. .....-..|..|+..+......+..
T Consensus 191 ~~~~~~~~~ii~~l~~~~~~L~~d~~Gn~ViQ~~l~~~~~ 230 (351)
T 3gvo_A 191 HCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRP 230 (351)
T ss_dssp HSCHHHHHHHHHHHHTTHHHHHTSTTHHHHHHHHHHHSCH
T ss_pred HCCHHHHHHHHHHHhhhHHhcCCCchHHHHHHHHHHhCch
Confidence 5444333333222 1122234577777777776665543
No 116
>3k49_A MRNA-binding protein PUF3; PUF3, pumilio, RNA binding, mitochondrial mRNA,, membrane, mitochondrion; HET: CIT; 2.50A {Saccharomyces cerevisiae} SCOP: a.118.1.0 PDB: 3k4e_A
Probab=86.25 E-value=6.7 Score=37.96 Aligned_cols=187 Identities=10% Similarity=0.060 Sum_probs=105.7
Q ss_pred ccccCCcHHHHHHHHcCCHHHHHHHHhhC-chhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcC-CCcc-cccccCCCCc
Q 046389 3 CEEKSTLSKLYRAALDDDWQTAETIFESH-EDYVKASLSKLGETALHVAASAGRIDFVKNLLGY-SPQV-LKLTDYFGQT 79 (558)
Q Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~-~~~~-~~~~d~~g~T 79 (558)
+.|..|.-.+..+...++.+..+.++++- |..+.-..|.+|+..+-.....+..+..+.+++. .|.. --..+..|..
T Consensus 37 ~~d~~gsR~lQ~~l~~~~~~~~~~I~~el~~~~~~L~~d~~gn~vvQkll~~~~~~~~~~i~~~~~g~~~~L~~~~~G~r 116 (369)
T 3k49_A 37 CKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKFFEFGSKIQKNTLVDQFKGNMKQLSLQMYACR 116 (369)
T ss_dssp HTSHHHHHHHHHHHTTCCHHHHHHHHHHHGGGHHHHHHSTTTHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHHSTTHHH
T ss_pred HcCCcchHHHHHHhccCCHHHHHHHHHHHHHHHHHHhhCcccccHHHHHHHhCCHHHHHHHHHHHhhhHHHHhcChhhHH
Confidence 45677777888888888887777666652 2333334489999999999999988877777762 1211 1123555665
Q ss_pred HhHHHHHcCCHHHHHHHHHc-Ccc-cccccCCCCCccHHHHHHHcCChHHHHHHHhcCc----cccCccchhHHHHHHHH
Q 046389 80 ALSLAAASGNLDLVQLMTED-NEH-LALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE----GQLDNKDLIELLIILIK 153 (558)
Q Consensus 80 pLh~A~~~g~~eiv~~Ll~~-~~~-~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~----~~~~~~~~~t~l~~a~~ 153 (558)
.+.-+......+-...+++. .+. .....+ ..|...+......+..+..+.+++.-. .-.....|...+..+..
T Consensus 117 VlQk~le~~~~~q~~~ii~el~~~~~~L~~d-~~Gn~ViQ~~l~~~~~~~~~~i~~~~~~~~~~ls~~~~Gs~Vvq~~l~ 195 (369)
T 3k49_A 117 VIQKALEYIDSNQRIELVLELSDSVLQMIKD-QNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLE 195 (369)
T ss_dssp HHHHHHHHSCHHHHHHHHGGGTTCHHHHHHS-TTHHHHHHHHHHHSCGGGCHHHHHHHTTTHHHHHTSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHhcC-cccchHHHHHHHhCCHHHHHHHHHHHHHHHHHHhCCCccCcHHHHHHH
Confidence 66666555555444444432 111 112344 666666666666555443333332211 22356677777777777
Q ss_pred hccHHHHHHHHhhCCc--ccccccCCCCcHHHHHhcCCC
Q 046389 154 TDLYEVALRLFKDHPQ--LATLRDSNEETALHALAGKSM 190 (558)
Q Consensus 154 ~~~~~~~~~Ll~~~~~--~~~~~d~~g~t~L~~a~~~~~ 190 (558)
.+..+.-..+++.-.. ..-..|..|+..+..+...+.
T Consensus 196 ~~~~~~~~~i~~~l~~~~~~L~~d~~GnyViQ~~l~~~~ 234 (369)
T 3k49_A 196 FGSSEDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQ 234 (369)
T ss_dssp HSCHHHHHHHHHTTTTCHHHHHHSTTHHHHHHHHHTCCT
T ss_pred hCCHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhcCC
Confidence 7665555555543111 112345666666665555543
No 117
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=68.60 E-value=15 Score=35.10 Aligned_cols=163 Identities=9% Similarity=-0.025 Sum_probs=102.1
Q ss_pred ccccCCcHHHHHHHHcCCHHHHHHHHhhC-chhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcC-CC-cccccccCCCCc
Q 046389 3 CEEKSTLSKLYRAALDDDWQTAETIFESH-EDYVKASLSKLGETALHVAASAGRIDFVKNLLGY-SP-QVLKLTDYFGQT 79 (558)
Q Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~-~~-~~~~~~d~~g~T 79 (558)
+.|..|+..+......|+.+....+++.- |..+.-..+.+|.-.+..+......+-...+++. .+ ..--..|..|+.
T Consensus 68 ~~d~~gn~vvQklle~~~~~~~~~i~~~i~g~~~~l~~~~~G~rvvQk~le~~~~~~~~~i~~el~~~~~~L~~d~~Gn~ 147 (351)
T 3gvo_A 68 MTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNH 147 (351)
T ss_dssp HTSTTHHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHGGGTTCHHHHHHSTTHHH
T ss_pred HhChhhhHHHHHHHhhCCHHHHHHHHHHHHhhHHHHhhCHHhHHHHHHHHHhCCHHHHHHHHHHhhhhHHHHHHhhhhhH
Confidence 56888999999999999988877776652 3333444488899999998888887766666652 12 222346777887
Q ss_pred HhHHHHHcCCHHHHHHHHHcCcc--cccccCCCCCccHHHHHHHcCChH----HHHHHHhcCccccCccchhHHHHHHHH
Q 046389 80 ALSLAAASGNLDLVQLMTEDNEH--LALDRESVDQYLPIHAGAMSGHKE----VVLYLYSITEGQLDNKDLIELLIILIK 153 (558)
Q Consensus 80 pLh~A~~~g~~eiv~~Ll~~~~~--~~~~~~~~~g~tpLh~A~~~g~~~----~v~~Ll~~~~~~~~~~~~~t~l~~a~~ 153 (558)
.+..+...+..+..+.+++.-.. .....+ ..|...+.........+ +++.|..+-..-..+..|+-.+..+..
T Consensus 148 ViQk~l~~~~~~~~~~i~~~~~~~~~~ls~~-~~G~~Vvq~~le~~~~~~~~~ii~~l~~~~~~L~~d~~Gn~ViQ~~l~ 226 (351)
T 3gvo_A 148 VVQKCIECVQPQSLQFIIDAFKGQVFVLSTH-PYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLE 226 (351)
T ss_dssp HHHHHHHHSCGGGTHHHHHHTTTTHHHHHTS-TTHHHHHHHHHHHSCHHHHHHHHHHHHTTHHHHHTSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHhC-cHhHHHHHHHHHHCCHHHHHHHHHHHhhhHHhcCCCchHHHHHHHHHH
Confidence 77777776665544445443211 112233 66766666666655433 333333322234477888888888877
Q ss_pred hccHHHHHHHHhh
Q 046389 154 TDLYEVALRLFKD 166 (558)
Q Consensus 154 ~~~~~~~~~Ll~~ 166 (558)
.+..+....+++.
T Consensus 227 ~~~~~~~~~i~~~ 239 (351)
T 3gvo_A 227 HGRPEDKSKIVSE 239 (351)
T ss_dssp HSCHHHHHHHHHT
T ss_pred hCchhhHHHHHHH
Confidence 7766655555543
No 118
>3k49_A MRNA-binding protein PUF3; PUF3, pumilio, RNA binding, mitochondrial mRNA,, membrane, mitochondrion; HET: CIT; 2.50A {Saccharomyces cerevisiae} SCOP: a.118.1.0 PDB: 3k4e_A
Probab=56.38 E-value=53 Score=31.47 Aligned_cols=130 Identities=10% Similarity=-0.029 Sum_probs=76.0
Q ss_pred ccccCCcHHHHHHHHcCCHHHHHHHHhhC-chhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcC-CC-cccccccCCCCc
Q 046389 3 CEEKSTLSKLYRAALDDDWQTAETIFESH-EDYVKASLSKLGETALHVAASAGRIDFVKNLLGY-SP-QVLKLTDYFGQT 79 (558)
Q Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~-~~-~~~~~~d~~g~T 79 (558)
++|..|+..+......+..+....+++.- |....-..+..|.-.+..+......+-...+++. .+ ..--..|..|+.
T Consensus 73 ~~d~~gn~vvQkll~~~~~~~~~~i~~~~~g~~~~L~~~~~G~rVlQk~le~~~~~q~~~ii~el~~~~~~L~~d~~Gn~ 152 (369)
T 3k49_A 73 SNDVFGNYVIQKFFEFGSKIQKNTLVDQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVLELSDSVLQMIKDQNGNH 152 (369)
T ss_dssp HHSTTTHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHHSTTHHHHHHHHHHHSCHHHHHHHHGGGTTCHHHHHHSTTHHH
T ss_pred hhCcccccHHHHHHHhCCHHHHHHHHHHHhhhHHHHhcChhhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCcccch
Confidence 46888999999999999988777666652 2222333377888888888877776655555552 12 222245777777
Q ss_pred HhHHHHHcCCHHHHHHHHHc--CcccccccCCCCCccHHHHHHHcCChHHHHHHHh
Q 046389 80 ALSLAAASGNLDLVQLMTED--NEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYS 133 (558)
Q Consensus 80 pLh~A~~~g~~eiv~~Ll~~--~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~ 133 (558)
.+......+..+-.+.+++. +.-.....+ +.|...+......+..+--+.+++
T Consensus 153 ViQ~~l~~~~~~~~~~i~~~~~~~~~~ls~~-~~Gs~Vvq~~l~~~~~~~~~~i~~ 207 (369)
T 3k49_A 153 VIQKAIETIPIEKLPFILSSLTGHIYHLSTH-SYGCRVIQRLLEFGSSEDQESILN 207 (369)
T ss_dssp HHHHHHHHSCGGGCHHHHHHHTTTHHHHHTS-TTHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHhCC-CccCcHHHHHHHhCCHHHHHHHHH
Confidence 76666665554332333221 111112234 677767776666666554444443
No 119
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=55.43 E-value=15 Score=35.02 Aligned_cols=20 Identities=5% Similarity=0.117 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHhhhhe
Q 046389 491 SLFMSIAAMMVVFCTTSFTI 510 (558)
Q Consensus 491 ~~~~~~~~m~~af~~~~~~~ 510 (558)
++.+|++++..+|.||+|.+
T Consensus 282 LTiit~IflP~T~IaGiyGM 301 (339)
T 4ev6_A 282 LTMVTTIFAVPMWITGIYGM 301 (339)
T ss_dssp HHHHHHHSSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhhccC
Confidence 46778899999999999976
No 120
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=53.19 E-value=11 Score=36.43 Aligned_cols=20 Identities=10% Similarity=0.190 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHhhhhe
Q 046389 491 SLFMSIAAMMVVFCTTSFTI 510 (558)
Q Consensus 491 ~~~~~~~~m~~af~~~~~~~ 510 (558)
++.+|++++..+|.||+|.+
T Consensus 306 LTiit~IflP~T~IaGiyGM 325 (363)
T 2iub_A 306 LTIIATIFMPLTFIAGIYGM 325 (363)
T ss_dssp HHHHHHHHHHHHHHTTSCC-
T ss_pred HHHHHHHHHHHHHHHhhhcc
Confidence 46778899999999999976
No 121
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=49.15 E-value=30 Score=21.28 Aligned_cols=16 Identities=31% Similarity=0.457 Sum_probs=10.1
Q ss_pred CCchhHHHHHHHHHHH
Q 046389 515 LPWLPVLVTVISSIPV 530 (558)
Q Consensus 515 ~~~~~~~~~~~~~~~~ 530 (558)
.+|+.+++.+++.+.+
T Consensus 8 vp~wiIi~s~l~GLll 23 (42)
T 2k1a_A 8 IPIWWVLVGVLGGLLL 23 (42)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHH
Confidence 4677777766665444
No 122
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=46.08 E-value=38 Score=34.19 Aligned_cols=44 Identities=11% Similarity=0.162 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHhhccchhhhhhhccCCchHHHHHHhcChHHHHHHHHHh
Q 046389 226 EQAITLVEIIWKEVIRSQDSEISTLIERPFQLTFVAAEKGNIEFLRVLIRE 276 (558)
Q Consensus 226 ~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~iv~~Ll~~ 276 (558)
....++.+.+.+.|..++.... .+.+...++.|+.+-+..+++.
T Consensus 157 ~~A~~l~~~M~~~G~~Pd~~ty-------~~Li~~~~~~g~~d~A~~ll~~ 200 (501)
T 4g26_A 157 DKAYEVDAHMVESEVVPEEPEL-------AALLKVSMDTKNADKVYKTLQR 200 (501)
T ss_dssp HHHHHHHHHHHHTTCCCCHHHH-------HHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCHHHH-------HHHHHHHhhCCCHHHHHHHHHH
Confidence 4555677777777776666553 4555566777777655555543
No 123
>3v71_A PUF (pumilio/FBF) domain-containing protein 7, CO transcript evidence; PUF repeats, RNA binding protein-RNA complex; HET: EPE; 2.90A {Caenorhabditis elegans}
Probab=44.53 E-value=28 Score=33.72 Aligned_cols=188 Identities=12% Similarity=-0.000 Sum_probs=98.7
Q ss_pred ccccCCcHHHHHHHHcCCHH-----HHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcC---CCccccccc
Q 046389 3 CEEKSTLSKLYRAALDDDWQ-----TAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGY---SPQVLKLTD 74 (558)
Q Consensus 3 ~~d~~g~t~L~~A~~~g~~~-----~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~---~~~~~~~~d 74 (558)
+.|..|.-.|......++.+ +++.+.+..+..+.-..|+.|+..+-...+.++.+..+.++.. +...--..|
T Consensus 26 a~Dq~Gsr~lQ~~l~~~~~~~~~~~if~~l~e~~~~~~~L~~d~~Gn~vvQklle~~~~~~~~~li~~~l~g~v~~Ls~~ 105 (382)
T 3v71_A 26 AIDPSGVKFLEANYPLDSEDQIRKAVFEKFTESTTLFVGLCHSRNGNFIVQKLVELATPAEQRELLRQMIDGGLLAMCKD 105 (382)
T ss_dssp HHSHHHHHHHHHTSCSCTTCHHHHHHHHHHHSCHHHHHHHHSSTTHHHHHHHHHHTCCHHHHHHHHHHHHHTCHHHHHTS
T ss_pred ccCCcccHHHHHHcccCChHHHHHHHHHHHHhhHHHHHHHhcCcHHHHHHHHHHHhCCHHHHHHHHHHHhcchHHHHHhC
Confidence 45666666666666665422 2333333223333444488888888888888886544444331 112222356
Q ss_pred CCCCcHhHHHHHcCCHHHHHHHHHc--Ccc-cccccCCCCCccHHHHHHHcCChHHHHHHHhc----Cc--cccCccchh
Q 046389 75 YFGQTALSLAAASGNLDLVQLMTED--NEH-LALDRESVDQYLPIHAGAMSGHKEVVLYLYSI----TE--GQLDNKDLI 145 (558)
Q Consensus 75 ~~g~TpLh~A~~~g~~eiv~~Ll~~--~~~-~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~----~~--~~~~~~~~~ 145 (558)
..|.-.+.-+......+-...+++. +.+ +....+ .+|...+.........+..+++++. +. .-..+..|.
T Consensus 106 ~~G~rvvQk~ie~~~~~~~~~li~eL~~~~~~~L~~D-~~GnhVIQk~le~~~~~~~~~Ii~~~~~~~~~~~la~h~~Gc 184 (382)
T 3v71_A 106 KFACRVVQLALQKFDHSNVFQLIQELSTFDLAAMCTD-QISIHVIQRVVKQLPVDMWTFFVHFLSSGDSLMAVCQDKYGC 184 (382)
T ss_dssp TTHHHHHHHHHHHSCHHHHHHHHHHHHTSCHHHHHHS-TTTHHHHHHHHTTSCTTTSHHHHHHHHSTTHHHHHHHSTTHH
T ss_pred ccchHHHHHHHHHCCHHHHHHHHHHhcccchHHHhcC-cccccHHHHHHHHCCHHHHHHHHHHHhcccchHhHhcCchhh
Confidence 6777777777766655433333322 111 123345 7777777777776655544444432 11 223466677
Q ss_pred HHHHHHHHhccH-----------HHHHHHHhh--CCcccccccCCCCcHHHHHhcCCCc
Q 046389 146 ELLIILIKTDLY-----------EVALRLFKD--HPQLATLRDSNEETALHALAGKSMM 191 (558)
Q Consensus 146 t~l~~a~~~~~~-----------~~~~~Ll~~--~~~~~~~~d~~g~t~L~~a~~~~~~ 191 (558)
..+..+...... .++..|+.. .....-..|..|+..+......+..
T Consensus 185 ~VlQ~~le~~~~~~k~~~~~~r~~~l~~l~~~I~~~~~~L~~d~~GNyVIQ~iL~~~~~ 243 (382)
T 3v71_A 185 RLVQQVIDRLAENPKLPCFKFRIQLLHSLMTCIVRNCYRLSSNEFANYVIQYVIKSSGI 243 (382)
T ss_dssp HHHHHHHHHHTCCSSSTTHHHHHHHHHHHHHHHHTTHHHHHTSTTTHHHHHHHHTCCST
T ss_pred HHHHHHHHhCCHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhCccccHHHHHHHhcCCC
Confidence 666666554321 122222221 1122235688888888888877653
No 124
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=39.63 E-value=32 Score=22.43 Aligned_cols=19 Identities=16% Similarity=0.443 Sum_probs=12.1
Q ss_pred ccCCCchhHHHHHHHHHHH
Q 046389 512 HDRLPWLPVLVTVISSIPV 530 (558)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~ 530 (558)
|...+|+.|++++++.+.+
T Consensus 4 ~~~vp~WiIi~svl~GLLL 22 (54)
T 2l8s_A 4 PGRVPLWVILLSAFAGLLL 22 (54)
T ss_dssp CCCCCTHHHHHHHHHHHHH
T ss_pred CccCchHHHHHHHHHHHHH
Confidence 3446777777777766444
No 125
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=34.29 E-value=36 Score=34.30 Aligned_cols=146 Identities=14% Similarity=0.131 Sum_probs=75.1
Q ss_pred HHHHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHH-CCC---------H----HHHHHHhcCCCcccccccCCC
Q 046389 12 LYRAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAAS-AGR---------I----DFVKNLLGYSPQVLKLTDYFG 77 (558)
Q Consensus 12 L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~-~g~---------~----~~v~~Ll~~~~~~~~~~d~~g 77 (558)
|...++.|+.+....++++-... ....|..-.+.|..|+. .+. . ++.+.+.+. +..++....
T Consensus 33 id~c~k~G~~~~A~~lf~~M~~~-Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~-G~~Pd~~ty-- 108 (501)
T 4g26_A 33 LDMCSKKGDVLEALRLYDEARRN-GVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVD-KVVPNEATF-- 108 (501)
T ss_dssp HHHTTTSCCHHHHHHHHHHHHHH-TCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHT-TCCCCHHHH--
T ss_pred HHHHHhCCCHHHHHHHHHHHHHc-CCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHh-CCCCCHHHH--
Confidence 45566788887777776652211 00112222344444443 222 2 333444443 333332211
Q ss_pred CcHhHHHHHcCCHHHHHHHHH----cCcccccccCCCCCc-cHHHHHHHcCChHHHHHHHhcCc---cccCccchhHHHH
Q 046389 78 QTALSLAAASGNLDLVQLMTE----DNEHLALDRESVDQY-LPIHAGAMSGHKEVVLYLYSITE---GQLDNKDLIELLI 149 (558)
Q Consensus 78 ~TpLh~A~~~g~~eiv~~Ll~----~~~~~~~~~~~~~g~-tpLh~A~~~g~~~~v~~Ll~~~~---~~~~~~~~~t~l~ 149 (558)
++.+...++.|+.+-+..+++ .|..+ + ..-. +.+...++.|+.+-+..+++.-. .........+.+.
T Consensus 109 n~lI~~~~~~g~~~~A~~l~~~M~~~g~~P----d-~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~ 183 (501)
T 4g26_A 109 TNGARLAVAKDDPEMAFDMVKQMKAFGIQP----R-LRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLK 183 (501)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHTTCCC----C-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHcCCCC----c-cceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 345666778888876655554 33322 2 2222 34455567788666555554322 1222334556677
Q ss_pred HHHHhccHHHHHHHHhh
Q 046389 150 ILIKTDLYEVALRLFKD 166 (558)
Q Consensus 150 ~a~~~~~~~~~~~Ll~~ 166 (558)
..++.|..+-+..++++
T Consensus 184 ~~~~~g~~d~A~~ll~~ 200 (501)
T 4g26_A 184 VSMDTKNADKVYKTLQR 200 (501)
T ss_dssp HHHHTTCHHHHHHHHHH
T ss_pred HHhhCCCHHHHHHHHHH
Confidence 77888888888887775
No 126
>3bwt_A Protein PUF4; pumilio, RNA binding, HO endonuclease, transcription, RNA binding protein; 2.69A {Saccharomyces cerevisiae} PDB: 4dzs_A 3bx2_A 3bx3_A
Probab=32.75 E-value=1.4e+02 Score=27.96 Aligned_cols=155 Identities=13% Similarity=0.091 Sum_probs=82.4
Q ss_pred ccccCCcHHHHHHHHcCCHHHHHHHHhhC-chhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcC-CCcc-cccccCCCCc
Q 046389 3 CEEKSTLSKLYRAALDDDWQTAETIFESH-EDYVKASLSKLGETALHVAASAGRIDFVKNLLGY-SPQV-LKLTDYFGQT 79 (558)
Q Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~-~~~~-~~~~d~~g~T 79 (558)
+.|..|.-.+......++.+....++++- +....-..|+.|+..+-.....+..+....+++. .|.. --..+..|.-
T Consensus 19 ~~~q~gsr~iQ~~l~~~~~~~~~~i~~el~~~~~~L~~d~~gn~vvQkll~~~~~~~~~~i~~~~~~~~~~l~~~~~G~r 98 (333)
T 3bwt_A 19 CKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTR 98 (333)
T ss_dssp TSSHHHHHHHHHHHHHSCHHHHHHHHHHHGGGHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHHHGGGHHHHHHSTTHHH
T ss_pred hcCcHhhHHHHHHHccCCHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHhhCCHHHHHHHHHHHHhHHHHHHhcccccH
Confidence 45667777888888888888777776652 2233334488999998888888887766666652 1111 1123445555
Q ss_pred HhHHHHHcCC-HHHHHHHHHc--CcccccccCCCCCccHHHHHHHcCChHHHHHHHhcCc----cccCccchhHHHHHHH
Q 046389 80 ALSLAAASGN-LDLVQLMTED--NEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE----GQLDNKDLIELLIILI 152 (558)
Q Consensus 80 pLh~A~~~g~-~eiv~~Ll~~--~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~----~~~~~~~~~t~l~~a~ 152 (558)
.+.-+..... .+-.+.+++. +.-.....+ ..|...+......+..+-.+.+++.-. .-.....|...+..+.
T Consensus 99 viQ~~l~~~~~~~~~~~i~~el~~~~~~L~~d-~~gn~Viqk~l~~~~~~~~~~i~~~l~~~~~~l~~~~~Gs~Vvq~~l 177 (333)
T 3bwt_A 99 ALQKLIECIKTDEEAQIVVDSLRPYTVQLSKD-LNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCL 177 (333)
T ss_dssp HHHHHHHHCCSHHHHHHHHHHHGGGHHHHHTS-TTHHHHHHHHHHHSCHHHHHHHHHHHHHSHHHHHTSTTHHHHHHHHH
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHHHhcC-CcccHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHH
Confidence 5554444321 2222222211 111112344 666666666666565554444433211 2224555666666555
Q ss_pred HhccHH
Q 046389 153 KTDLYE 158 (558)
Q Consensus 153 ~~~~~~ 158 (558)
..+..+
T Consensus 178 ~~~~~~ 183 (333)
T 3bwt_A 178 DHGTTE 183 (333)
T ss_dssp HHCCHH
T ss_pred HhCCHH
Confidence 554433
No 127
>3k62_A FEM-3 mRNA-binding factor 2; FBF, FEM-3 binding factor, PUF, RNA-binding specificity, base flipping, base stacking; 1.90A {Caenorhabditis elegans} PDB: 3k5y_A 3k5z_A 3k61_A 3k5q_A 3k64_A 3qg9_A 3v6y_A 3v74_A 3qgc_A 3qgb_A
Probab=32.73 E-value=78 Score=30.91 Aligned_cols=151 Identities=13% Similarity=0.079 Sum_probs=87.6
Q ss_pred ccccCCcHHHHHHHHcC-CHHHHHHHHhhC-c---hhhhhhcCCCCchHHHHHHHCCCH-------HHHHHHhcC-CC-c
Q 046389 3 CEEKSTLSKLYRAALDD-DWQTAETIFESH-E---DYVKASLSKLGETALHVAASAGRI-------DFVKNLLGY-SP-Q 68 (558)
Q Consensus 3 ~~d~~g~t~L~~A~~~g-~~~~v~~ll~~~-~---~~~~~~~~~~g~t~Lh~Aa~~g~~-------~~v~~Ll~~-~~-~ 68 (558)
+.|.+|.-.|......+ +.+....++++- + ..+.-..|+.|+..+-.-.+.|.. +.-+.+++. .| .
T Consensus 35 a~Dq~GsR~lQ~~l~~~~~~e~~~~If~el~~~~~~~~~L~~d~fGNyvvQKlle~~~~~~~~~~~~q~~~i~~~l~g~v 114 (412)
T 3k62_A 35 AVDKTGCQFLEKAVKGSLTSYQKFQLFEQVIGRKDDFLKLSTNIFGNYLVQSVIGISLATNDDGYTKRQEKLKNFISSQM 114 (412)
T ss_dssp HTSHHHHHHHHHHTTSCCCHHHHHHHHHHHSSSHHHHHHHHTSTTHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHTH
T ss_pred hcCChhHHHHHHHhccCCCHHHHHHHHHHHHhhhhHHHHHHhCcHHHHHHHHHHHhCCcccccccHHHHHHHHHHHHHHH
Confidence 56777777888888876 666655555441 1 123334488898887777766665 433333331 01 1
Q ss_pred ccccccCCCCcHhHHHHHcCCHHHHHHHHHcC---cc-cccccCCCCCccHHHHHHHcCChHHHHHHHhcCc------cc
Q 046389 69 VLKLTDYFGQTALSLAAASGNLDLVQLMTEDN---EH-LALDRESVDQYLPIHAGAMSGHKEVVLYLYSITE------GQ 138 (558)
Q Consensus 69 ~~~~~d~~g~TpLh~A~~~g~~eiv~~Ll~~~---~~-~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~------~~ 138 (558)
.--..|..|...+.-+......+-...+++.- +. .....+ ..|...+......+..+..+++++.-. .-
T Consensus 115 ~~L~~~~~GsrvvQk~le~~~~~~~~~iv~eL~~~~~i~~L~~D-~~GNhVIQK~Le~~~~~~~~~I~~~~~~~~~~~~l 193 (412)
T 3k62_A 115 TDMCLDKFACRVIQSSLQNMDLSLACKLVQALPRDARLIAICVD-QNANHVIQKVVAVIPLKNWEFIVDFVATPEHLRQI 193 (412)
T ss_dssp HHHHHSTTHHHHHHHHHHHSCHHHHHHHHHTSCCSHHHHHHHHC-TTTHHHHHHHHHHSCHHHHHHHHHHHHSHHHHHHH
T ss_pred HHHHcChhhhHHHHHHHHhCCHHHHHHHHHHHhccccHHHHHhC-ccccHHHHHHHHhCCHHHHHHHHHHHhcchhHHHH
Confidence 11235667777777777777766666666543 11 123355 788888888777777666666654321 12
Q ss_pred cCccchhHHHHHHHHh
Q 046389 139 LDNKDLIELLIILIKT 154 (558)
Q Consensus 139 ~~~~~~~t~l~~a~~~ 154 (558)
.....|...+..+...
T Consensus 194 a~h~~GcrVvQk~le~ 209 (412)
T 3k62_A 194 CSDKYGCRVVQTIIEK 209 (412)
T ss_dssp HTSHHHHHHHHHHHHH
T ss_pred hcCcchHHHHHHHHHh
Confidence 2455565555555543
No 128
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=27.39 E-value=58 Score=21.24 Aligned_cols=17 Identities=29% Similarity=0.419 Sum_probs=10.7
Q ss_pred CCCchhHHHHHHHHHHH
Q 046389 514 RLPWLPVLVTVISSIPV 530 (558)
Q Consensus 514 ~~~~~~~~~~~~~~~~~ 530 (558)
..+|+.|++.+++.+.+
T Consensus 9 ~vp~wiIi~svl~GLll 25 (54)
T 2knc_A 9 AIPIWWVLVGVLGGLLL 25 (54)
T ss_dssp TCCHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHH
Confidence 35777777777665443
No 129
>3ux4_A Acid-activated UREA channel; transport protein; HET: XP4; 3.26A {Helicobacter pylori}
Probab=26.72 E-value=1.8e+02 Score=24.68 Aligned_cols=51 Identities=14% Similarity=0.208 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhe------ec-cCCCchhHHHHHHHHHHHHHHHHHh
Q 046389 487 SGLASLFMSIAAMMVVFCTTSFTI------FH-DRLPWLPVLVTVISSIPVLLFIRQY 537 (558)
Q Consensus 487 ~~~~~~~~~~~~m~~af~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (558)
++.+|+|+|+.++..|+.+-.-.+ +. ....|.++.-...+.+.+++|+.+.
T Consensus 104 lGWfsLFVAI~al~~a~~~~~~~~~~~~~~~~~~~d~~~~~iWlaWavLW~lfFl~l~ 161 (195)
T 3ux4_A 104 YSWYSLFVAINTVPAAILSHYSDMLDDHKVLGITEGDWWAIIWLAWGVLWLTAFIENI 161 (195)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCCCCCCCSCSSSCSCTHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhccccccccCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 678899999998887775411111 10 2247888888888999988888764
No 130
>4hkr_A Calcium release-activated calcium channel protein; ORAI1, eukaryotic membrane protein, membran protein, ION channel, STIM, membrane; 3.35A {Drosophila melanogaster} PDB: 4hks_A
Probab=24.48 E-value=3.3e+02 Score=23.26 Aligned_cols=103 Identities=19% Similarity=0.242 Sum_probs=47.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhccc--ccc--------chhhhhhhhh--hHHHHHHHHHHHHHHHHHHHHHhhh
Q 046389 441 ASFIAFAISDAVGLVFSATSILTFLSIRSS--VYS--------EEDFLWRVPG--SLASGLASLFMSIAAMMVVFCTTSF 508 (558)
Q Consensus 441 ~~f~~F~~~~~~a~~~s~~~~~~~~~~~~~--~~~--------~~~~~~~~~~--~~~~~~~~~~~~~~~m~~af~~~~~ 508 (558)
..+-+|.++-++-+..-+.++++=.++++. .+. .+.-+.+++. -+.|++. +.+++.--++--+...|
T Consensus 58 ~LLi~fav~Ttllv~vml~AlMIsTcILPnIeav~~~h~~~~v~esPH~r~~~yIE~AW~fS-T~lGi~LFL~evall~W 136 (214)
T 4hkr_A 58 GMLIAFAICTTLLVAVHMLALMISTCILPNIETVSNLHSISLVHESPHERLHWYIETAWAFS-TLLGLILFLLEIAILCW 136 (214)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHTTTC----------------CHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhcccccccCCChHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhe
Confidence 456788888887777777776554555531 111 0111111221 2234332 22332222222233344
Q ss_pred heeccCCCchhHHHHHHHHHHH-HHHHHHhhHHHHHHH
Q 046389 509 TIFHDRLPWLPVLVTVISSIPV-LLFIRQYHRFFASTL 545 (558)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 545 (558)
+-+.+.....++.-+++ -+|+ ++|+.+-+.||++..
T Consensus 137 VKF~~~~~~aa~~~t~v-liPv~i~F~~Fa~hFYrsL~ 173 (214)
T 4hkr_A 137 VKFYDLSRRAAWSATVV-LIPVMIIFMAFAIHFYRSLV 173 (214)
T ss_dssp HHHTTTCHHHHHHHHHH-THHHHHHHHHHHHHHHHHHH
T ss_pred EEeecCCcHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 44444333333322222 2344 677778888888877
No 131
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=23.96 E-value=94 Score=16.73 Aligned_cols=17 Identities=18% Similarity=0.309 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHhhHHHH
Q 046389 526 SSIPVLLFIRQYHRFFA 542 (558)
Q Consensus 526 ~~~~~~~~~~~~~~~~~ 542 (558)
+.+.++.|+.+.|++++
T Consensus 11 glvalltflafgfwlfk 27 (32)
T 2lx0_A 11 GLVALLTFLAFGFWLFK 27 (32)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33455667777776665
No 132
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=21.64 E-value=62 Score=19.24 Aligned_cols=17 Identities=18% Similarity=0.419 Sum_probs=11.2
Q ss_pred hHHHHHcCCHHHHHHHH
Q 046389 81 LSLAAASGNLDLVQLMT 97 (558)
Q Consensus 81 Lh~A~~~g~~eiv~~Ll 97 (558)
+..||..|+++.++.|-
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 45667777777776653
No 133
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=20.22 E-value=3.7e+02 Score=22.45 Aligned_cols=96 Identities=10% Similarity=0.062 Sum_probs=0.0
Q ss_pred HHHHcCCHHHHHHHHhhCchhhhhhcCCCCchHHHHHHHCCCHHHHHHHhcCCCcccccccCCCCcHhHHHHHcCCH-HH
Q 046389 14 RAALDDDWQTAETIFESHEDYVKASLSKLGETALHVAASAGRIDFVKNLLGYSPQVLKLTDYFGQTALSLAAASGNL-DL 92 (558)
Q Consensus 14 ~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~g~~-ei 92 (558)
.|...|++++++..+.+ ..+-...+......|+.+-++.+.+. .....+-+...|.+...|++ ++
T Consensus 43 ~AL~~gn~~lAe~cy~~---------~~D~~~L~~Ly~~tg~~e~L~kla~i-----A~~~g~~n~af~~~l~lGdv~~~ 108 (177)
T 3mkq_B 43 EALAQGNASLAEMIYQT---------QHSFDKLSFLYLVTGDVNKLSKMQNI-----AQTREDFGSMLLNTFYNNSTKER 108 (177)
T ss_dssp HHHHTTCHHHHHHHHHH---------TTCHHHHHHHHHHHTCHHHHHHHHHH-----HHHTTCHHHHHHHHHHHTCHHHH
T ss_pred HHHHcCChHHHHHHHHH---------hCCHHHHHHHHHHhCCHHHHHHHHHH-----HHHCccHHHHHHHHHHcCCHHHH
Q ss_pred HHHHHHcCcccccccCCCCCccHHHHHHHcCChHHHHHHHh
Q 046389 93 VQLMTEDNEHLALDRESVDQYLPIHAGAMSGHKEVVLYLYS 133 (558)
Q Consensus 93 v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~ 133 (558)
+++|++.|.-. -+...|-.+|..++.+-+++
T Consensus 109 i~lL~~~~r~~----------eA~~~A~t~g~~~~a~~~~~ 139 (177)
T 3mkq_B 109 SSIFAEGGSLP----------LAYAVAKANGDEAAASAFLE 139 (177)
T ss_dssp HHHHHHTTCHH----------HHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHCCChH----------HHHHHHHHcCcHHHHHHHHH
Done!