Your job contains 1 sequence.
>046394
WLMPSEGGYLEAEGVEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYM
AAAGCKGYPYFYNRDGTELHCSKEHGEVLKLQFLLASINKLGQLRYQNVTMGEIVGNFWT
GLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLR
KYEVLQTLPGHAKTLDFSRKDSGDFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIG
HSMGVSGILIPGSGEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETIMLNPSKIGTVR
EAKKKEKPTKQEREDEMEAAVEAVKGFVWKNKTKGRNKPSKKAKKKQELVAKAKRPFLDQ
QLKEEQSLSKKKQKLSEE
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 046394
(378 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2075750 - symbol:AT3G10530 "AT3G10530" species... 745 1.2e-100 2
CGD|CAL0005357 - symbol:orf19.4835 species:5476 "Candida ... 314 7.6e-42 2
UNIPROTKB|Q5APD0 - symbol:CaO19.12298 "Putative uncharact... 314 7.6e-42 2
SGD|S000000884 - symbol:UTP7 "Nucleolar protein" species:... 248 6.4e-40 2
FB|FBgn0030000 - symbol:CG2260 species:7227 "Drosophila m... 243 6.7e-40 2
POMBASE|SPAC959.03c - symbol:SPAC959.03c "U3 snoRNP-assoc... 311 3.4e-38 2
UNIPROTKB|G4NCA1 - symbol:MGG_01100 "Small nucleolar ribo... 242 5.6e-37 2
UNIPROTKB|O15213 - symbol:WDR46 "WD repeat-containing pro... 289 7.9e-36 2
MGI|MGI:1931871 - symbol:Wdr46 "WD repeat domain 46" spec... 292 1.4e-35 2
DICTYBASE|DDB_G0280489 - symbol:wdr46 "BING4 C-terminal d... 272 1.9e-34 2
WB|WBGene00009211 - symbol:wdr-46 species:6239 "Caenorhab... 284 2.4e-34 2
ASPGD|ASPL0000002969 - symbol:AN6265 species:162425 "Emer... 237 3.4e-34 2
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 151 1.4e-07 1
UNIPROTKB|F1RF38 - symbol:KATNB1 "Uncharacterized protein... 149 1.6e-07 1
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 148 3.1e-07 1
RGD|1310215 - symbol:Taf5l "TAF5-like RNA polymerase II, ... 120 7.7e-07 1
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 144 8.3e-07 1
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 137 5.0e-06 1
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 134 1.1e-05 1
TAIR|locus:2194589 - symbol:AT1G10580 "AT1G10580" species... 132 1.5e-05 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 126 2.3e-05 1
MGI|MGI:2443143 - symbol:Wdr3 "WD repeat domain 3" specie... 128 7.9e-05 1
RGD|1307480 - symbol:Wdr3 "WD repeat domain 3" species:10... 128 7.9e-05 1
UNIPROTKB|E1BM03 - symbol:WDR3 "Uncharacterized protein" ... 128 7.9e-05 1
UNIPROTKB|Q9UNX4 - symbol:WDR3 "WD repeat-containing prot... 128 7.9e-05 1
UNIPROTKB|F1SAY9 - symbol:WDR3 "Uncharacterized protein" ... 127 0.00010 1
ZFIN|ZDB-GENE-030131-5987 - symbol:taf5l "TAF5-like RNA p... 124 0.00012 1
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 124 0.00015 1
UNIPROTKB|O75529 - symbol:TAF5L "TAF5-like RNA polymerase... 123 0.00015 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 120 0.00019 1
UNIPROTKB|E1C8E9 - symbol:TAF5L "Uncharacterized protein"... 121 0.00024 1
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 113 0.00029 2
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 118 0.00032 1
MGI|MGI:1919039 - symbol:Taf5l "TAF5-like RNA polymerase ... 120 0.00033 1
UNIPROTKB|H3BT67 - symbol:KATNB1 "Katanin p80 WD40 repeat... 95 0.00041 1
UNIPROTKB|H3BTV8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 95 0.00041 1
UNIPROTKB|F1RG42 - symbol:TAF5L "Uncharacterized protein"... 119 0.00042 1
UNIPROTKB|Q229Z6 - symbol:TTHERM_01308010 "POC1 centriola... 121 0.00050 2
UNIPROTKB|F1N575 - symbol:TAF5L "Uncharacterized protein"... 118 0.00054 1
UNIPROTKB|E2RR78 - symbol:TAF5L "Uncharacterized protein"... 118 0.00057 1
DICTYBASE|DDB_G0282793 - symbol:wdr61 "WD40 repeat-contai... 113 0.00065 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 115 0.00072 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 114 0.00074 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 114 0.00075 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 113 0.00076 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 114 0.00088 1
ZFIN|ZDB-GENE-030131-263 - symbol:prp19 "PRP19/PSO4 homol... 115 0.00095 1
>TAIR|locus:2075750 [details] [associations]
symbol:AT3G10530 "AT3G10530" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002686 Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:AC013428
GO:GO:0080008 KO:K14768 InterPro:IPR012952 Pfam:PF08149
SMART:SM01033 EMBL:BT004313 EMBL:BT006135 IPI:IPI00533564
RefSeq:NP_187664.2 UniGene:At.39914 ProteinModelPortal:Q9LPP3
SMR:Q9LPP3 IntAct:Q9LPP3 STRING:Q9LPP3 PRIDE:Q9LPP3
EnsemblPlants:AT3G10530.1 GeneID:820218 KEGG:ath:AT3G10530
TAIR:At3g10530 InParanoid:Q9LPP3 OMA:GHSMGWS PhylomeDB:Q9LPP3
ProtClustDB:CLSN2690838 ArrayExpress:Q9LPP3 Genevestigator:Q9LPP3
Uniprot:Q9LPP3
Length = 536
Score = 745 (267.3 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 150/210 (71%), Positives = 167/210 (79%)
Query: 146 MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPG-HAKTLDFSRKDS-- 202
M CH GPVS++AFHPNGHLMATSGK+ KIKIWDLRK+E +QT+ HAKTL FS+K
Sbjct: 277 MQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTIHSFHAKTLSFSQKGLLA 336
Query: 203 ----------GDFSG--SHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILI 250
GD SG SHNY RYM +SMVKGYQI KV FRPYEDV+GIGHSMG S ILI
Sbjct: 337 AGTGSFVQILGDSSGGSSHNYTRYMNHSMVKGYQIEKVMFRPYEDVIGIGHSMGWSSILI 396
Query: 251 PGSGEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETIMLNPSKIGTVREAKKKEKPTK 310
PGSGEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETIML+PSKIG +R +++KEKP++
Sbjct: 397 PGSGEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETIMLDPSKIGAMRPSRRKEKPSR 456
Query: 311 QEREDEMEAAVEAVKGFVWKNKTKGRNKPS 340
E E E E A+EA K KNKTKGRNKPS
Sbjct: 457 GEIEAEKEVAIEAAKSTELKNKTKGRNKPS 486
Score = 448 (162.8 bits), Expect = 2.6e-69, Sum P(2) = 2.6e-69
Identities = 97/168 (57%), Positives = 115/168 (68%)
Query: 53 FTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEHGEVLKLQFL-----LASINKLGQLRYQ 107
F + ++ AAA K Y Y Y RDGTELHC KE G V +L+FL LAS+N GQL YQ
Sbjct: 166 FLHNDQFFAAAQ-KKYAYIYGRDGTELHCLKERGPVARLRFLKNHFLLASVNMSGQLHYQ 224
Query: 108 NVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCHQGPV 153
+VT G +V + TG GRTDV+ VNP+N VV LGHSGGT M CH GPV
Sbjct: 225 DVTHGGMVASIRTGKGRTDVMEVNPYNSVVGLGHSGGTVTMWKPTSQAPLVQMQCHPGPV 284
Query: 154 SALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPG-HAKTLDFSRK 200
S++AFHPNGHLMATSGK+ KIKIWDLRK+E +QT+ HAKTL FS+K
Sbjct: 285 SSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTIHSFHAKTLSFSQK 332
Score = 273 (101.2 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 49/68 (72%), Positives = 58/68 (85%)
Query: 1 WLMPSEGGYLEAEGVEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYM 60
WL+P+E GYLE EG+EKTWR+KQ IA EVDILSSRNQYDI+LP+ GPY LDFT+SGR+M
Sbjct: 73 WLLPAEAGYLETEGLEKTWRVKQTDIANEVDILSSRNQYDIVLPDFGPYKLDFTASGRHM 132
Query: 61 AAAGCKGY 68
A G KG+
Sbjct: 133 LAGGRKGH 140
Score = 62 (26.9 bits), Expect = 2.3e-27, Sum P(2) = 2.3e-27
Identities = 19/60 (31%), Positives = 26/60 (43%)
Query: 202 SGDFSGSHNYNRYMGYSMVKGYQIGK-----VSFRPYEDVLGIGHSMGVSGILIPGSGEP 256
S + SG +Y MV + GK + PY V+G+GHS G + P S P
Sbjct: 214 SVNMSGQLHYQDVTHGGMVASIRTGKGRTDVMEVNPYNSVVGLGHSGGTVTMWKPTSQAP 273
Score = 40 (19.1 bits), Expect = 4.5e-25, Sum P(2) = 4.5e-25
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 128 IRVNPFNGVVSLGHSGG 144
+ P+ V+ +GHS G
Sbjct: 374 VMFRPYEDVIGIGHSMG 390
>CGD|CAL0005357 [details] [associations]
symbol:orf19.4835 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0000472 "endonucleolytic
cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447 "endonucleolytic
cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005357 Gene3D:2.130.10.10 SUPFAM:SSF50978
EMBL:AACQ01000001 EMBL:AACQ01000002 KO:K14768 InterPro:IPR012952
Pfam:PF08149 SMART:SM01033 eggNOG:NOG301990 RefSeq:XP_723331.1
RefSeq:XP_723521.1 ProteinModelPortal:Q5APD0 STRING:Q5APD0
GeneID:3634818 GeneID:3634948 KEGG:cal:CaO19.12298
KEGG:cal:CaO19.4835 Uniprot:Q5APD0
Length = 527
Score = 314 (115.6 bits), Expect = 7.6e-42, Sum P(2) = 7.6e-42
Identities = 79/204 (38%), Positives = 115/204 (56%)
Query: 150 QGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH--AKTLDFSRKDSGDFS- 206
+GP+ LA G MA + D +KIWD+RK++ + A +LD S D+G S
Sbjct: 268 RGPIRDLAIDREGKYMAVAAADKTLKIWDIRKFKEVDNYYSQTPASSLDIS--DTGLLSV 325
Query: 207 --------------GSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIPG 252
G H YM + ++ G +I K F P+ED+LG+GH G + I++PG
Sbjct: 326 GWGPHVTIWKDILKGKHQSEPYMNH-LIPGSKIEKAKFVPFEDILGVGHEEGFNSIIVPG 384
Query: 253 SGEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETIMLNPSKIGTV--REAKKKEKPTK 310
SGE N+D+ NP+E+ KQR+++EV SLLDKLP +TI L+P+ IGTV R + + KP +
Sbjct: 385 SGEANYDALELNPYESVKQRQQQEVRSLLDKLPADTIALDPNVIGTVDKRASTVRLKPGE 444
Query: 311 --------QEREDEMEAAVEAVKG 326
Q+ +D+ME E VKG
Sbjct: 445 ITELADKTQQSKDKMEIKAE-VKG 467
Score = 209 (78.6 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 57/176 (32%), Positives = 85/176 (48%)
Query: 49 YTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEHGEV-----LKLQFLLASINKLGQ 103
+ + + + +Y A A K Y + Y+ GTELH K+H E L FLL + G
Sbjct: 149 HAVKYLHNDQYFAVAQ-KKYTFIYDNQGTELHRLKQHIEATLLDFLPYHFLLVTAGHTGF 207
Query: 104 LRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCH 149
L+Y +V+ G++V T LG T ++ NP+N V LGH GT +
Sbjct: 208 LKYHDVSTGQLVSELRTKLGPTQAMKHNPWNAVTCLGHGNGTVSMWAPNMPEPLVKLQVA 267
Query: 150 QGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH--AKTLDFSRKDSG 203
+GP+ LA G MA + D +KIWD+RK++ + A +LD S D+G
Sbjct: 268 RGPIRDLAIDREGKYMAVAAADKTLKIWDIRKFKEVDNYYSQTPASSLDIS--DTG 321
Score = 155 (59.6 bits), Expect = 7.6e-42, Sum P(2) = 7.6e-42
Identities = 33/87 (37%), Positives = 55/87 (63%)
Query: 2 LMPSEGGYLEAEG-VEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYM 60
L+ E G+LEAE +EKT++ KQ+ IA VD ++ ++++ LPE GPYT+D++ +GR +
Sbjct: 60 LLQEEQGFLEAENDMEKTFKFKQDEIADAVDSSTANKKFELKLPEFGPYTIDYSRTGRDL 119
Query: 61 AAAGCKGY----PYFYNRDGTELHCSK 83
G KG+ + + G ELH ++
Sbjct: 120 LLGGKKGHVASIDWRKGKLGCELHLNE 146
Score = 42 (19.8 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 10/42 (23%), Positives = 16/42 (38%)
Query: 120 TGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPN 161
+G D + +NP+ V L + P +A PN
Sbjct: 385 SGEANYDALELNPYESVKQRQQQEVRSLLDKLPADTIALDPN 426
Score = 39 (18.8 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 232 PYEDVLGIGHSMGVSGILIPGSGEP 256
P+ V +GH G + P EP
Sbjct: 236 PWNAVTCLGHGNGTVSMWAPNMPEP 260
>UNIPROTKB|Q5APD0 [details] [associations]
symbol:CaO19.12298 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005357 Gene3D:2.130.10.10
SUPFAM:SSF50978 EMBL:AACQ01000001 EMBL:AACQ01000002 KO:K14768
InterPro:IPR012952 Pfam:PF08149 SMART:SM01033 eggNOG:NOG301990
RefSeq:XP_723331.1 RefSeq:XP_723521.1 ProteinModelPortal:Q5APD0
STRING:Q5APD0 GeneID:3634818 GeneID:3634948 KEGG:cal:CaO19.12298
KEGG:cal:CaO19.4835 Uniprot:Q5APD0
Length = 527
Score = 314 (115.6 bits), Expect = 7.6e-42, Sum P(2) = 7.6e-42
Identities = 79/204 (38%), Positives = 115/204 (56%)
Query: 150 QGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH--AKTLDFSRKDSGDFS- 206
+GP+ LA G MA + D +KIWD+RK++ + A +LD S D+G S
Sbjct: 268 RGPIRDLAIDREGKYMAVAAADKTLKIWDIRKFKEVDNYYSQTPASSLDIS--DTGLLSV 325
Query: 207 --------------GSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIPG 252
G H YM + ++ G +I K F P+ED+LG+GH G + I++PG
Sbjct: 326 GWGPHVTIWKDILKGKHQSEPYMNH-LIPGSKIEKAKFVPFEDILGVGHEEGFNSIIVPG 384
Query: 253 SGEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETIMLNPSKIGTV--REAKKKEKPTK 310
SGE N+D+ NP+E+ KQR+++EV SLLDKLP +TI L+P+ IGTV R + + KP +
Sbjct: 385 SGEANYDALELNPYESVKQRQQQEVRSLLDKLPADTIALDPNVIGTVDKRASTVRLKPGE 444
Query: 311 --------QEREDEMEAAVEAVKG 326
Q+ +D+ME E VKG
Sbjct: 445 ITELADKTQQSKDKMEIKAE-VKG 467
Score = 209 (78.6 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 57/176 (32%), Positives = 85/176 (48%)
Query: 49 YTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEHGEV-----LKLQFLLASINKLGQ 103
+ + + + +Y A A K Y + Y+ GTELH K+H E L FLL + G
Sbjct: 149 HAVKYLHNDQYFAVAQ-KKYTFIYDNQGTELHRLKQHIEATLLDFLPYHFLLVTAGHTGF 207
Query: 104 LRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCH 149
L+Y +V+ G++V T LG T ++ NP+N V LGH GT +
Sbjct: 208 LKYHDVSTGQLVSELRTKLGPTQAMKHNPWNAVTCLGHGNGTVSMWAPNMPEPLVKLQVA 267
Query: 150 QGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH--AKTLDFSRKDSG 203
+GP+ LA G MA + D +KIWD+RK++ + A +LD S D+G
Sbjct: 268 RGPIRDLAIDREGKYMAVAAADKTLKIWDIRKFKEVDNYYSQTPASSLDIS--DTG 321
Score = 155 (59.6 bits), Expect = 7.6e-42, Sum P(2) = 7.6e-42
Identities = 33/87 (37%), Positives = 55/87 (63%)
Query: 2 LMPSEGGYLEAEG-VEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYM 60
L+ E G+LEAE +EKT++ KQ+ IA VD ++ ++++ LPE GPYT+D++ +GR +
Sbjct: 60 LLQEEQGFLEAENDMEKTFKFKQDEIADAVDSSTANKKFELKLPEFGPYTIDYSRTGRDL 119
Query: 61 AAAGCKGY----PYFYNRDGTELHCSK 83
G KG+ + + G ELH ++
Sbjct: 120 LLGGKKGHVASIDWRKGKLGCELHLNE 146
Score = 42 (19.8 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 10/42 (23%), Positives = 16/42 (38%)
Query: 120 TGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPN 161
+G D + +NP+ V L + P +A PN
Sbjct: 385 SGEANYDALELNPYESVKQRQQQEVRSLLDKLPADTIALDPN 426
Score = 39 (18.8 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 232 PYEDVLGIGHSMGVSGILIPGSGEP 256
P+ V +GH G + P EP
Sbjct: 236 PWNAVTCLGHGNGTVSMWAPNMPEP 260
>SGD|S000000884 [details] [associations]
symbol:UTP7 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0030686 "90S preribosome" evidence=IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000884 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BK006939 EMBL:U18839
GO:GO:0030686 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472
GO:GO:0000480 HOGENOM:HOG000165037 KO:K14768 OrthoDB:EOG4DRDMP
InterPro:IPR012952 Pfam:PF08149 SMART:SM01033 PIR:S50585
RefSeq:NP_011005.1 ProteinModelPortal:P40055 SMR:P40055
DIP:DIP-5398N IntAct:P40055 MINT:MINT-513710 STRING:P40055
PaxDb:P40055 PeptideAtlas:P40055 EnsemblFungi:YER082C GeneID:856815
KEGG:sce:YER082C CYGD:YER082c eggNOG:NOG301990
GeneTree:ENSGT00390000007075 OMA:YWEEETT NextBio:983088
Genevestigator:P40055 GermOnline:YER082C Uniprot:P40055
Length = 554
Score = 248 (92.4 bits), Expect = 6.4e-40, Sum P(2) = 6.4e-40
Identities = 47/122 (38%), Positives = 78/122 (63%)
Query: 203 GDFSGS-HNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIPGSGEPNFDSW 261
G G+ H YM + + G ++ + F P+ED+LG+GH G++ +++PG+GE N+D+
Sbjct: 356 GSMGGNPHRNTPYMSH-LFAGNKVENLGFVPFEDLLGVGHQTGITNLIVPGAGEANYDAL 414
Query: 262 VANPFETSKQRREKEVHSLLDKLPPETIMLNPSKIGTVREAKKKEKPTKQEREDEMEAAV 321
NPFET KQR+E+EV +LL+KLP +TI L+P+ IG+V K+ + +D + +
Sbjct: 415 ELNPFETKKQRQEQEVRTLLNKLPADTITLDPNSIGSV---DKRSSTIRLNAKDLAQTTM 471
Query: 322 EA 323
+A
Sbjct: 472 DA 473
Score = 226 (84.6 bits), Expect = 6.4e-40, Sum P(2) = 6.4e-40
Identities = 54/159 (33%), Positives = 87/159 (54%)
Query: 49 YTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEHGEVLKLQFL-----LASINKLGQ 103
++ + + +Y A A K Y + Y+ +GTELH K+H E L FL L + + G
Sbjct: 155 HSATYLQNEQYFAVAQ-KKYTFIYDHEGTELHRLKQHIEARHLDFLPYHYLLVTAGETGW 213
Query: 104 LRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCH 149
L+Y +V+ G++V T G T + NP+N V+ LGHS GT +L
Sbjct: 214 LKYHDVSTGQLVSELRTKAGPTMAMAQNPWNAVMHLGHSNGTVSLWSPSMPEPLVKLLSA 273
Query: 150 QGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL 188
+GPV+++A +G+ MAT+G D +KIWD+R ++ L ++
Sbjct: 274 RGPVNSIAIDRSGYYMATTGADRSMKIWDIRNFKQLHSV 312
Score = 133 (51.9 bits), Expect = 3.6e-30, Sum P(2) = 3.6e-30
Identities = 24/69 (34%), Positives = 41/69 (59%)
Query: 1 WLMPSEGGYLEAEG-VEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRY 59
+L+P GYLE E +EKT++++Q I VD+ ++ D+ L E GPY + + +G +
Sbjct: 65 YLLPESNGYLEPENELEKTFKVQQSEIKSSVDVSTANKALDLSLKEFGPYHIKYAKNGTH 124
Query: 60 MAAAGCKGY 68
+ G KG+
Sbjct: 125 LLITGRKGH 133
Score = 47 (21.6 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 232 PYEDVLGIGHSMGVSGILIPGSGEP 256
P+ V+ +GHS G + P EP
Sbjct: 242 PWNAVMHLGHSNGTVSLWSPSMPEP 266
>FB|FBgn0030000 [details] [associations]
symbol:CG2260 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
KO:K14768 InterPro:IPR012952 Pfam:PF08149 SMART:SM01033
eggNOG:NOG301990 GeneTree:ENSGT00390000007075 OMA:YWEEETT
EMBL:AY095054 RefSeq:NP_572441.1 UniGene:Dm.12847 SMR:Q9W3K3
IntAct:Q9W3K3 MINT:MINT-873984 STRING:Q9W3K3
EnsemblMetazoa:FBtr0071194 GeneID:31732 KEGG:dme:Dmel_CG2260
UCSC:CG2260-RA FlyBase:FBgn0030000 InParanoid:Q9W3K3
OrthoDB:EOG4PZGP0 GenomeRNAi:31732 NextBio:775065 Uniprot:Q9W3K3
Length = 609
Score = 243 (90.6 bits), Expect = 6.7e-40, Sum P(2) = 6.7e-40
Identities = 51/107 (47%), Positives = 70/107 (65%)
Query: 230 FRPYEDVLGIGHSMGVSGILIPGSGEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETI 289
F PYEDVLG+ + G +L+PGSGEPNFD+ NP+ETSKQRRE EVH+LL+K+PPE I
Sbjct: 437 FCPYEDVLGVSTAKGFQSLLVPGSGEPNFDAMEDNPYETSKQRREHEVHALLEKIPPELI 496
Query: 290 MLNPSKIGTVREAKKKEKPTKQEREDEMEAAVEAVKGFVWKNKTKGR 336
L+P +I V +EK + + ++A +K ++K KGR
Sbjct: 497 TLDPQEITGVDAPTLQEKIDAKRKLFHLKAPRINMKS---RHKMKGR 540
Score = 238 (88.8 bits), Expect = 6.7e-40, Sum P(2) = 6.7e-40
Identities = 56/140 (40%), Positives = 77/140 (55%)
Query: 60 MAAAGCKGYPYFYNRDGTELHCSKEHGEVLKLQFL-----LASINKLGQLRYQNVTMGEI 114
M A K + YFY++ GTELHC K V +L FL LA+ N G + +V++GE+
Sbjct: 228 MYAVAQKSWVYFYDKKGTELHCIKRLNRVNRLDFLPYHFLLAAGNSAGYASWLDVSIGEL 287
Query: 115 VGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCHQGPVSALAFHP 160
VGNF TGLG ++R NP NGV+ +G G +LCH +SALA P
Sbjct: 288 VGNFNTGLGDIRMLRHNPRNGVLCIGGGRGVVSMWSPKVREPLAKLLCHSTAMSALAVEP 347
Query: 161 NGHLMATSGKDCKIKIWDLR 180
G + T+G D +K+WD+R
Sbjct: 348 KGQYLVTAGLDRAVKVWDIR 367
Score = 121 (47.7 bits), Expect = 2.8e-29, Sum P(3) = 2.8e-29
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 2 LMPSEGGYLEAEGVEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMA 61
L+ G L+A+ E T +Q IA VDI SS +++ + E GPY + +T +GR++
Sbjct: 131 LLQETAGQLQADEGETTAEFRQSQIAENVDIQSSAKHFNLNM-EFGPYRMRYTKNGRHLL 189
Query: 62 AAGCKGYPYFYNRDGTELHC 81
G +G+ ++ LHC
Sbjct: 190 LGGKRGHVAAFDWVTKRLHC 209
Score = 48 (22.0 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 224 QIGKVSFRPYEDVLGIGHSMGVSGILIPGSGE--PNFDS 260
++ ++ F PY +L G+S G + L GE NF++
Sbjct: 255 RVNRLDFLPYHFLLAAGNSAGYASWLDVSIGELVGNFNT 293
Score = 45 (20.9 bits), Expect = 2.8e-29, Sum P(3) = 2.8e-29
Identities = 13/59 (22%), Positives = 23/59 (38%)
Query: 137 VSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL 195
VS+G G G + L +P ++ G + +W + E L L H+ +
Sbjct: 282 VSIGELVGNFNTGLGDIRMLRHNPRNGVLCIGGGRGVVSMWSPKVREPLAKLLCHSTAM 340
>POMBASE|SPAC959.03c [details] [associations]
symbol:SPAC959.03c "U3 snoRNP-associated protein Utp7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC959.03c EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 RefSeq:NP_594170.1
ProteinModelPortal:Q9P4X3 STRING:Q9P4X3 EnsemblFungi:SPAC959.03c.1
GeneID:2543484 KEGG:spo:SPAC959.03c HOGENOM:HOG000165037 KO:K14768
OMA:TTPLVKM OrthoDB:EOG4DRDMP NextBio:20804496 InterPro:IPR012952
Pfam:PF08149 SMART:SM01033 Uniprot:Q9P4X3
Length = 520
Score = 311 (114.5 bits), Expect = 3.4e-38, Sum P(2) = 3.4e-38
Identities = 82/209 (39%), Positives = 116/209 (55%)
Query: 146 MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL--PGHAKTLDFSRKDSG 203
ML H+GPV LA + +G M T+G D +K+WDLR Y+ L + P A+ L S D G
Sbjct: 261 MLTHRGPVRDLAVNRDGRYMVTAGADSLLKVWDLRTYKELHSYYTPTPAQRLTLS--DRG 318
Query: 204 DFS---GSH------------NYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGI 248
+ G H N+ YM + ++ + + + PYED+LGIGH+ G I
Sbjct: 319 LLAVGWGPHATIWKDALRTKQNFP-YMNH-LLPSSSVVDLHYCPYEDILGIGHAKGFESI 376
Query: 249 LIPGSGEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETIMLNPSKIGTVREAKKKEKP 308
++PGSGEPN+DS+ +PF + KQR+E EV LL+KL PE I LN IG V A P
Sbjct: 377 IVPGSGEPNYDSYENDPFASRKQRQETEVRQLLEKLRPEMISLNADFIGNVDRAA----P 432
Query: 309 TKQEREDEMEAAVEAVKGFVWKNKTKGRN 337
+ ++ E E E E + +V K K +G+N
Sbjct: 433 SLRKAEAEEEKPPE--EKWVPKAKARGKN 459
Score = 254 (94.5 bits), Expect = 4.7e-21, P = 4.7e-21
Identities = 64/162 (39%), Positives = 86/162 (53%)
Query: 58 RYMAAAGCKGYPYFYNRDGTELHCSKEHGEVLKLQFL-----LASINKLGQLRYQNVTMG 112
+Y A A K Y Y Y+ GTE+HC K H EV L FL L SI G L+YQ+V+ G
Sbjct: 155 QYFAVAQ-KKYVYVYDNMGTEIHCLKRHIEVNALDFLPYHLLLTSIGNAGYLKYQDVSTG 213
Query: 113 EIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT--------------MLCHQGPVSALAF 158
++V TG+G + V+ NP N V +GH+ G ML H+GPV LA
Sbjct: 214 QLVAEHRTGMGASHVLHQNPHNAVEHVGHANGQVTLWSPSSTTPLVKMLTHRGPVRDLAV 273
Query: 159 HPNGHLMATSGKDCKIKIWDLRKYEVLQTL--PGHAKTLDFS 198
+ +G M T+G D +K+WDLR Y+ L + P A+ L S
Sbjct: 274 NRDGRYMVTAGADSLLKVWDLRTYKELHSYYTPTPAQRLTLS 315
Score = 123 (48.4 bits), Expect = 3.4e-38, Sum P(2) = 3.4e-38
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 8 GYLEAEGVEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKG 67
G LEAEG+E+T++ +Q+ +A V + ++ + + L + G Y+ D+T GR + G KG
Sbjct: 64 GLLEAEGLERTYKFRQDQLAPNVALETATKSFSLDLDKFGGYSFDYTRDGRMILLGGRKG 123
Query: 68 YPYFYN-RDG---TELH 80
+ ++ R G TELH
Sbjct: 124 HISAFDWRTGKLLTELH 140
Score = 50 (22.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 22/84 (26%), Positives = 33/84 (39%)
Query: 173 KIKIWDLRKYEVLQTLPGHAKTLDFSRKDSGDFSGSHNYNRYMGYSMVKGYQIGKVSFRP 232
++ D Y +L T G+A L + +G H MG S V +Q P
Sbjct: 183 EVNALDFLPYHLLLTSIGNAGYLKYQDVSTGQLVAEHRTG--MGASHVL-HQ------NP 233
Query: 233 YEDVLGIGHSMGVSGILIPGSGEP 256
+ V +GH+ G + P S P
Sbjct: 234 HNAVEHVGHANGQVTLWSPSSTTP 257
Score = 37 (18.1 bits), Expect = 3.5e-29, Sum P(2) = 3.5e-29
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 67 GYPYFYNRDGTELHCSKEHGEV 88
GY + Y RDG + G +
Sbjct: 104 GYSFDYTRDGRMILLGGRKGHI 125
>UNIPROTKB|G4NCA1 [details] [associations]
symbol:MGG_01100 "Small nucleolar ribonucleoprotein complex
subunit" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001235 GO:GO:0003676 GO:GO:0030686
GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480 KO:K14768
InterPro:IPR012952 Pfam:PF08149 SMART:SM01033 RefSeq:XP_003717834.1
ProteinModelPortal:G4NCA1 EnsemblFungi:MGG_01100T0 GeneID:2675171
KEGG:mgr:MGG_01100 Uniprot:G4NCA1
Length = 556
Score = 242 (90.2 bits), Expect = 5.6e-37, Sum P(2) = 5.6e-37
Identities = 51/117 (43%), Positives = 78/117 (66%)
Query: 221 KGYQIGKVSFRPYEDVLGIGHSMGVSGILIPGSGEPNFDSWVANPFETSKQRREKEVHSL 280
+G ++ +V + P+EDVLGIGH G S IL+PG+GE NFD+ NP+ET KQR+E EV SL
Sbjct: 389 EGRRVERVRWCPFEDVLGIGHDGGFSSILVPGAGEANFDALEINPYETVKQRQESEVKSL 448
Query: 281 LDKLPPETIMLNPSKIGTVREAKKKEKPTKQEREDEMEAAVEAVKGFVWKNKTKGRN 337
L+KL PE I L+P+ +G + + E + ER+ ++A E + + +N+ +G+N
Sbjct: 449 LNKLQPEMIALDPNFVGNLD--LRSEAQRRAERD--LDAPPEDIADEI-RNRMRGKN 500
Score = 210 (79.0 bits), Expect = 5.6e-37, Sum P(2) = 5.6e-37
Identities = 54/180 (30%), Positives = 89/180 (49%)
Query: 45 ELGPYTLD--FTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEH-----GEVLKLQFLLAS 97
+LG D + + +Y A A K Y Y+R+G ELH ++H E L FLL +
Sbjct: 174 QLGETVRDVKWLHNNQYFAVAQKKTV-YLYDRNGVELHNLRKHINVTHMEFLPYHFLLCT 232
Query: 98 INKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGT------------ 145
+ G L+YQ+ + G+IV + LG T + NP+N ++ +GH+ GT
Sbjct: 233 ASDTGMLKYQDTSTGQIVSEVASKLGPTQSLVQNPWNAILHMGHNNGTVTLWSPNSSDPL 292
Query: 146 --MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSRKDSG 203
+L H+GPV +LA G M ++G+D ++ +WD+R ++ + + DSG
Sbjct: 293 VKLLAHKGPVRSLAIDREGRYMVSTGQDSRMAVWDIRMFKEVNNYFTRTPASSVAISDSG 352
Score = 145 (56.1 bits), Expect = 3.7e-30, Sum P(2) = 3.7e-30
Identities = 31/91 (34%), Positives = 57/91 (62%)
Query: 2 LMPSEGGYLEAEG-VEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYM 60
L +E G+LE EG +E+T++ +Q+ I V + +++ ++D+ L LGPY D+T +GR +
Sbjct: 91 LHENEAGFLEPEGELERTYKTRQDEITEGVAVETAQKRFDLSLDGLGPYLCDYTRNGREL 150
Query: 61 AAAGCKGYPYFYN-RDGTELHCSKEHGEVLK 90
G KG+ ++ R+G +L C + GE ++
Sbjct: 151 LIGGRKGHVATFDWREG-KLGCEIQLGETVR 180
Score = 60 (26.2 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 119 WTGLGR-TDVIRVNPFNGVVSLGHSGG 144
W G GR + +R PF V+ +GH GG
Sbjct: 386 WGGEGRRVERVRWCPFEDVLGIGHDGG 412
Score = 46 (21.3 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 232 PYEDVLGIGHSMGVSGILIPGSGEP 256
P+ +L +GH+ G + P S +P
Sbjct: 267 PWNAILHMGHNNGTVTLWSPNSSDP 291
>UNIPROTKB|O15213 [details] [associations]
symbol:WDR46 "WD repeat-containing protein 46" species:9606
"Homo sapiens" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 EMBL:AL031228 EMBL:AL844527 EMBL:AL662827
EMBL:AL662820 EMBL:Z97184 EMBL:BX000343 KO:K14768
InterPro:IPR012952 Pfam:PF08149 SMART:SM01033 eggNOG:NOG301990
OMA:YWEEETT EMBL:AF447870 EMBL:BC000388 IPI:IPI00023126
RefSeq:NP_001157739.1 RefSeq:NP_005443.3 UniGene:Hs.520063
UniGene:Hs.671763 ProteinModelPortal:O15213 SMR:O15213
STRING:O15213 PhosphoSite:O15213 PaxDb:O15213 PRIDE:O15213
DNASU:9277 Ensembl:ENST00000374617 Ensembl:ENST00000383208
Ensembl:ENST00000432609 Ensembl:ENST00000432933
Ensembl:ENST00000457382 GeneID:9277 KEGG:hsa:9277 UCSC:uc003ods.3
CTD:9277 GeneCards:GC06M033246 H-InvDB:HIX0058254 HGNC:HGNC:13923
HPA:HPA043004 MIM:611440 neXtProt:NX_O15213 PharmGKB:PA25924
HOVERGEN:HBG050687 InParanoid:O15213 OrthoDB:EOG49W2F6
PhylomeDB:O15213 GenomeRNAi:9277 NextBio:34769 ArrayExpress:O15213
Bgee:O15213 CleanEx:HS_WDR46 Genevestigator:O15213 Uniprot:O15213
Length = 610
Score = 289 (106.8 bits), Expect = 7.9e-36, Sum P(2) = 7.9e-36
Identities = 78/208 (37%), Positives = 118/208 (56%)
Query: 146 MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLR-KYEVL--QTLPGHAKTLDFSRKDS 202
+LCH+G V A+A G MATSG D ++KI+DLR Y+ L +TLP A L FS++
Sbjct: 355 ILCHRGGVRAVAVDSTGTYMATSGLDHQLKIFDLRGTYQPLSTRTLPHGAGHLAFSQRGL 414
Query: 203 GDFSGSHNYNRYMGY------SMVKGYQIGKVS-------FRPYEDVLGIGHSMGVSGIL 249
N + G S+ + Y ++S F P+EDVLG+GH+ G++ +L
Sbjct: 415 LVAGMGDVVNIWAGQGKASPPSLEQPYLTHRLSGPVHGLQFCPFEDVLGVGHTGGITSML 474
Query: 250 IPGSGEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETIMLNPSKIGTVREAKKKEKPT 309
+PG+GEPNFD +NP+ + KQR+E EV +LL+K+P E I L+P + V ++
Sbjct: 475 VPGAGEPNFDGLESNPYRSRKQRQEWEVKALLEKVPAELICLDPRALAEVDVISLEQG-- 532
Query: 310 KQEREDEMEAAVEAVKGFVWKNKTKGRN 337
K+E+ + + +A F K K KGR+
Sbjct: 533 KKEQIERLGYDPQAKAPFQPKPKQKGRS 560
Score = 217 (81.4 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 59/155 (38%), Positives = 84/155 (54%)
Query: 53 FTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEHGEVLKLQFL-----LASINKLGQLRYQ 107
F S +A A + + + Y+ G ELHC + V +L+FL LA+ ++ G L Y
Sbjct: 244 FLHSEALLAVAQNR-WLHIYDNQGIELHCIRRCDRVTRLEFLPFHFLLATASETGFLTYL 302
Query: 108 NVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTM--------------LCHQGPV 153
+V++G+IV GR DV+ NP+N V+ LGHS GT+ LCH+G V
Sbjct: 303 DVSVGKIVAALNARAGRLDVMSQNPYNAVIHLGHSNGTVSLWSPAMKEPLAKILCHRGGV 362
Query: 154 SALAFHPNGHLMATSGKDCKIKIWDLR-KYEVLQT 187
A+A G MATSG D ++KI+DLR Y+ L T
Sbjct: 363 RAVAVDSTGTYMATSGLDHQLKIFDLRGTYQPLST 397
Score = 129 (50.5 bits), Expect = 7.9e-36, Sum P(2) = 7.9e-36
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 2 LMPSEGGYLEAEGVEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMA 61
L+ E G+LE E E T +I Q I VDI S+ +D+ L + GPY L+++ +GR++A
Sbjct: 152 LLAEEPGFLEGEDGEDTAKICQADIVEAVDIASAAKHFDLNLRQFGPYRLNYSRTGRHLA 211
Query: 62 AAGCKGY 68
G +G+
Sbjct: 212 FGGRRGH 218
Score = 54 (24.1 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 228 VSFRPYEDVLGIGHSMGVSGILIPGSGEP 256
+S PY V+ +GHS G + P EP
Sbjct: 323 MSQNPYNAVIHLGHSNGTVSLWSPAMKEP 351
Score = 45 (20.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 132 PFNGVVSLGHSGG 144
PF V+ +GH+GG
Sbjct: 457 PFEDVLGVGHTGG 469
Score = 37 (18.1 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 153 VSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLD 196
V+ L F P L+AT+ + + D+ +++ L A LD
Sbjct: 278 VTRLEFLPFHFLLATASETGFLTYLDVSVGKIVAALNARAGRLD 321
>MGI|MGI:1931871 [details] [associations]
symbol:Wdr46 "WD repeat domain 46" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1931871 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 EMBL:AF110520 EMBL:AF100956 HOGENOM:HOG000165037
KO:K14768 InterPro:IPR012952 Pfam:PF08149 SMART:SM01033
eggNOG:NOG301990 GeneTree:ENSGT00390000007075 OMA:YWEEETT CTD:9277
HOVERGEN:HBG050687 OrthoDB:EOG49W2F6 EMBL:BC046977 IPI:IPI00129141
RefSeq:NP_065628.1 UniGene:Mm.2437 ProteinModelPortal:Q9Z0H1
SMR:Q9Z0H1 STRING:Q9Z0H1 PhosphoSite:Q9Z0H1 PaxDb:Q9Z0H1
PRIDE:Q9Z0H1 Ensembl:ENSMUST00000025170 GeneID:57315 KEGG:mmu:57315
UCSC:uc008cai.1 InParanoid:Q9Z0H1 ChiTaRS:WDR46 NextBio:313667
Bgee:Q9Z0H1 CleanEx:MM_WDR46 Genevestigator:Q9Z0H1
GermOnline:ENSMUSG00000024312 Uniprot:Q9Z0H1
Length = 622
Score = 292 (107.8 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
Identities = 80/210 (38%), Positives = 120/210 (57%)
Query: 146 MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLR-KYEVL--QTLPGHAKTLDFSRKD- 201
+LCH+G V A+A G MATSG D ++KI+DLR ++ L +TLP A L FS++
Sbjct: 354 ILCHRGGVRAVAVDSTGTYMATSGLDHQLKIFDLRGTFQPLSSRTLPQGAGHLAFSQRGL 413
Query: 202 ----SGD----FSGSHNYNR------YMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSG 247
GD ++G + Y+ + + G+ G + F P+EDVLG+GHS G +
Sbjct: 414 LVAGMGDVVNIWAGQGKASPPSLEQPYLTHRL-SGHVHG-LQFCPFEDVLGVGHSGGFTS 471
Query: 248 ILIPGSGEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETIMLNPSKIGTVREAKKKEK 307
+L+PG+ EPNFD NP+ + KQR+E EV +LL+K+P E I LNP + V +++
Sbjct: 472 MLVPGAAEPNFDGLENNPYRSRKQRQEWEVKALLEKVPAELICLNPRALAEVDVVTLEQQ 531
Query: 308 PTKQEREDEMEAAVEAVKGFVWKNKTKGRN 337
K+ER + + +A F K K KGR+
Sbjct: 532 --KKERIERLGYDPDAKAAFQPKAKQKGRS 559
Score = 209 (78.6 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 56/149 (37%), Positives = 80/149 (53%)
Query: 51 LDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEHGEVLKLQFL-----LASINKLGQLR 105
+ F S +A A + + Y Y+ G ELHC + V +L+FL LA+ ++ G L
Sbjct: 241 IHFLHSEALLAVAQNR-WLYIYDNQGIELHCIRRCDRVTRLEFLPFHFLLATTSETGFLT 299
Query: 106 YQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTM--------------LCHQG 151
Y +V++G+IV GR V+ NP+N V+ LGHS GT+ LCH+G
Sbjct: 300 YLDVSVGKIVTALNVRAGRLSVMAQNPYNAVIHLGHSNGTVSLWSPAVKEPLAKILCHRG 359
Query: 152 PVSALAFHPNGHLMATSGKDCKIKIWDLR 180
V A+A G MATSG D ++KI+DLR
Sbjct: 360 GVRAVAVDSTGTYMATSGLDHQLKIFDLR 388
Score = 124 (48.7 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 2 LMPSEGGYLEAEGVEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMA 61
L+ E G+L E E T +I Q I VDI S+ +D+ L + GPY L+++ +GR++A
Sbjct: 151 LLAEEPGFLVGEDGEDTAKILQTDIVEAVDIASAAKHFDLNLRQFGPYRLNYSRTGRHLA 210
Query: 62 AAGCKGY 68
G +G+
Sbjct: 211 LGGRRGH 217
Score = 54 (24.1 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 220 VKGYQIGKVSFRPYEDVLGIGHSMGVSGILIPGSGEP 256
V+ ++ ++ PY V+ +GHS G + P EP
Sbjct: 314 VRAGRLSVMAQNPYNAVIHLGHSNGTVSLWSPAVKEP 350
Score = 49 (22.3 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 123 GRTDVIRVNPFNGVVSLGHSGG 144
G ++ PF V+ +GHSGG
Sbjct: 447 GHVHGLQFCPFEDVLGVGHSGG 468
Score = 45 (20.9 bits), Expect = 4.3e-05, Sum P(3) = 4.3e-05
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 111 MGEIVGNFWTGLGRTDVIRVN-PFNGVVSLGHSGGTMLC 148
MG++V N W G G+ + P+ GH G C
Sbjct: 418 MGDVV-NIWAGQGKASPPSLEQPYLTHRLSGHVHGLQFC 455
Score = 39 (18.8 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 298 TVREAKKKEKPTKQEREDEMEAAVE 322
T K+K+K QE D++ ++E
Sbjct: 561 TASLVKRKKKVMDQEHRDKVRQSLE 585
>DICTYBASE|DDB_G0280489 [details] [associations]
symbol:wdr46 "BING4 C-terminal domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030515
"snoRNA binding" evidence=ISS] [GO:0030490 "maturation of SSU-rRNA"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0280489 Gene3D:2.130.10.10
SUPFAM:SSF50978 GenomeReviews:CM000152_GR GO:GO:0030515
EMBL:AAFI02000036 GO:GO:0030490 GO:GO:0005732 KO:K14768
InterPro:IPR012952 Pfam:PF08149 SMART:SM01033 eggNOG:NOG301990
RefSeq:XP_641204.1 ProteinModelPortal:Q54VA5 STRING:Q54VA5
EnsemblProtists:DDB0233108 GeneID:8622585 KEGG:ddi:DDB_G0280489
InParanoid:Q54VA5 OMA:CEFISEV Uniprot:Q54VA5
Length = 622
Score = 272 (100.8 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 72/207 (34%), Positives = 117/207 (56%)
Query: 148 CHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRK-YEVLQTLPGH--AKTLDFSRKD--- 201
CH+ P++++A +G+ + TSG D IKI+DLR YE + ++ S +
Sbjct: 394 CHKSPITSMAVSLSGNHLVTSGLDGMIKIFDLRNTYEEMHAFRTKFTPNSISLSHTNVLA 453
Query: 202 -SGDFSGSHNYNRYMGYSMVKGYQIGK-------VSFRPYEDVLGIGHSMGVSGILIPGS 253
+GD ++ + S+ + Y I K V F P+EDVLGIG G S IL+PGS
Sbjct: 454 VAGD-KETYLWKNPFDTSVKEPYLIHKNASMARNVQFCPFEDVLGIGTDNGFSSILVPGS 512
Query: 254 GEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETIMLNPSKIGTVREAKKKEKPTKQER 313
G N+DS A+PF + K +RE+++ SLL+K+P + I L+P+ IGT+++ K ++ K +R
Sbjct: 513 GIANYDSMEADPFASKKMKREQDIKSLLEKIPHDMISLDPNIIGTIQQGVKTDE-NKHKR 571
Query: 314 EDEMEAAVEAVKGFVWKN--KTKGRNK 338
+D+ + + F K +TK +NK
Sbjct: 572 QDKQRQ--DKNRQFDPKKLEETKQKNK 596
Score = 134 (52.2 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 38/123 (30%), Positives = 62/123 (50%)
Query: 2 LMPSEGGYLEAEGV-EKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYM 60
L+ + G++ AE EKT+++ Q IA VDI SS +D+ L GPY + ++ +GRY+
Sbjct: 189 LLQHDVGFIVAENDREKTYKLTQNKIASSVDIQSSGKVFDLALEPNGPYKIQYSKNGRYL 248
Query: 61 AAAGCKGY----PYFYNRDGTELHCSKEHGEVLKLQFLLASINKLGQLRYQNVTMGEIVG 116
AG KG+ + + TE H + + + LQ S+ L Q +Y + + V
Sbjct: 249 LLAGAKGHFSMIDWQRGKKFTERHLASPIRDAVFLQN--ESMFALAQKKYTYIYNQDGVE 306
Query: 117 NFW 119
W
Sbjct: 307 MHW 309
Score = 128 (50.1 bits), Expect = 8.2e-34, Sum P(2) = 8.2e-34
Identities = 31/91 (34%), Positives = 51/91 (56%)
Query: 60 MAAAGCKGYPYFYNRDGTELHCSKEHGE-----VLKLQFLLASINKLGQLRYQNVTMGE- 113
M A K Y Y YN+DG E+H K+H + L FLL S G++ Y+++++G+
Sbjct: 288 MFALAQKKYTYIYNQDGVEMHWLKDHYDPKFLDYLPYHFLLVSATNKGKIIYEDISVGQK 347
Query: 114 IVGNFWTGLGRTDVIRVNPFNGVVSLGHSGG 144
+V +F++G + NP N V++LG + G
Sbjct: 348 VVESFYSG--PLSAMCKNPQNAVMNLGFTTG 376
Score = 46 (21.3 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 14/63 (22%), Positives = 28/63 (44%)
Query: 255 EPNFDSWVANPFETSKQRREKEVHSLLDKLPPETIMLNPSKIGTVREAKKKEKPTKQERE 314
+PN + +T + + +++ DK +P K+ E K+K K K++ E
Sbjct: 551 DPNIIGTIQQGVKTDENKHKRQDKQRQDK----NRQFDPKKL---EETKQKNKERKEKLE 603
Query: 315 DEM 317
E+
Sbjct: 604 SEI 606
Score = 41 (19.5 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 89 LKLQFLLASINKLGQLRYQN 108
+K F+ INK+G+L+ ++
Sbjct: 160 IKNPFMKTRINKIGELKLES 179
Score = 40 (19.1 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 27/127 (21%), Positives = 53/127 (41%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSRKDSGDFSGS 208
+ GP+SA+ +P +M +++W + + L H + S S SG+
Sbjct: 353 YSGPLSAMCKNPQNAVMNLGFTTGIVQMWIPKSRNPIVKLHCHKSPIT-SMAVS--LSGN 409
Query: 209 HNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIG-----HSMGVSGI-LIPGSGEPNFDSWV 262
H + M+K + + YE++ +S+ +S ++ +G+ W
Sbjct: 410 HLVTSGLD-GMIKIFDLRNT----YEEMHAFRTKFTPNSISLSHTNVLAVAGDKETYLW- 463
Query: 263 ANPFETS 269
NPF+TS
Sbjct: 464 KNPFDTS 470
>WB|WBGene00009211 [details] [associations]
symbol:wdr-46 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0005730 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:Z70684 HOGENOM:HOG000165037
KO:K14768 InterPro:IPR012952 Pfam:PF08149 SMART:SM01033
eggNOG:NOG301990 GeneTree:ENSGT00390000007075 OMA:YWEEETT
PIR:T21493 RefSeq:NP_502358.1 ProteinModelPortal:Q19873 SMR:Q19873
STRING:Q19873 PaxDb:Q19873 EnsemblMetazoa:F28D1.1.1
EnsemblMetazoa:F28D1.1.2 GeneID:178185 KEGG:cel:CELE_F28D1.1
UCSC:F28D1.1.1 CTD:178185 WormBase:F28D1.1 InParanoid:Q19873
NextBio:900078 Uniprot:Q19873
Length = 580
Score = 284 (105.0 bits), Expect = 2.4e-34, Sum P(2) = 2.4e-34
Identities = 66/168 (39%), Positives = 95/168 (56%)
Query: 146 MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQ--TLPGHAKTLDFSRKDS- 202
+L H V +A G+ MAT+G D K +IWD+R + L +LP + S+K +
Sbjct: 328 ILTHLSAVKGIAVDDQGNYMATTGLDRKCRIWDVRMFRQLHAYSLPFGVSNVAISQKMNV 387
Query: 203 ----GD----FSGSHNYNRYMGYSMVK-GYQIGKVSFRPYEDVLGIGHSMGVSGILIPGS 253
G+ F G HN Y + G + + F P+EDVLGIGH+ G + +L+PG+
Sbjct: 388 ACAVGNHVQVFRGMHNGTCKEPYLVHNCGGVVTDLRFVPWEDVLGIGHAGGFTSMLVPGA 447
Query: 254 GEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETIMLNPSKIGTVRE 301
G+PN D+ +NP+ET QR+E+E+ LLDK+ PE I LNP I V E
Sbjct: 448 GDPNVDTLRSNPYETKSQRKEREIKQLLDKIQPELISLNPDDINKVNE 495
Score = 197 (74.4 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 55/169 (32%), Positives = 83/169 (49%)
Query: 53 FTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEHGEVLKLQFL-----LASINKLGQLRYQ 107
F + ++A A K Y Y Y+ GTELHC K + +L+FL L ++ L Y
Sbjct: 217 FLHTENFIAVAQ-KNYTYVYDNLGTELHCLKTMYDTARLEFLPHHFLLVGSSRNSFLNYV 275
Query: 108 NVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTM--------------LCHQGPV 153
+V++G+ V +F T G DV+ NP N ++ GH+ GT+ L H V
Sbjct: 276 DVSVGKQVASFATKSGTLDVMCQNPANAIIHTGHTNGTVSLWSPNSKEPLVKILTHLSAV 335
Query: 154 SALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQ--TLPGHAKTLDFSRK 200
+A G+ MAT+G D K +IWD+R + L +LP + S+K
Sbjct: 336 KGIAVDDQGNYMATTGLDRKCRIWDVRMFRQLHAYSLPFGVSNVAISQK 384
Score = 119 (46.9 bits), Expect = 2.4e-34, Sum P(2) = 2.4e-34
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 18 TWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGT 77
T+ I+Q+ IA VD+ ++ +++ LP GPY +D+T +GR++ G KG+ +
Sbjct: 141 TYSIRQKDIAESVDLAAATKHFELKLPRFGPYHIDYTDNGRHLVIGGRKGHLAALDWQTK 200
Query: 78 ELHCSKEHGE-VLKLQFL 94
LH + E V ++FL
Sbjct: 201 HLHFEQSVMEKVSDVKFL 218
Score = 46 (21.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 125 TDVIRVNPFNGVVSLGHSGG 144
TD +R P+ V+ +GH+GG
Sbjct: 420 TD-LRFVPWEDVLGIGHAGG 438
Score = 42 (19.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 15/72 (20%), Positives = 28/72 (38%)
Query: 185 LQTLPGHAKTLDFSRKDSGDFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMG 244
L+ LP H + SR ++ + ++ G + + P ++ GH+ G
Sbjct: 254 LEFLPHHFLLVGSSRNSFLNYVDVSVGKQVASFATKSG-TLDVMCQNPANAIIHTGHTNG 312
Query: 245 VSGILIPGSGEP 256
+ P S EP
Sbjct: 313 TVSLWSPNSKEP 324
>ASPGD|ASPL0000002969 [details] [associations]
symbol:AN6265 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003676 EMBL:AACD01000107
EMBL:BN001301 GO:GO:0030686 GO:GO:0032040 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 HOGENOM:HOG000165037 KO:K14768
OrthoDB:EOG4DRDMP InterPro:IPR012952 Pfam:PF08149 SMART:SM01033
eggNOG:NOG301990 OMA:YWEEETT RefSeq:XP_663869.1
ProteinModelPortal:Q5AZL5 STRING:Q5AZL5
EnsemblFungi:CADANIAT00006725 GeneID:2871161 KEGG:ani:AN6265.2
Uniprot:Q5AZL5
Length = 535
Score = 237 (88.5 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 48/124 (38%), Positives = 74/124 (59%)
Query: 214 YMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIPGSGEPNFDSWVANPFETSKQRR 273
YM + G +I + + PYED+LG+ H G + I++PG+GEPNFD+ NP+E KQR+
Sbjct: 361 YMSWGG-DGQRIENLRWAPYEDILGVAHDKGFASIIVPGAGEPNFDALEVNPYENPKQRQ 419
Query: 274 EKEVHSLLDKLPPETIMLNPSKIGTVREAKKKEKPTKQEREDEMEAAVEAVKGFVWKNKT 333
E EV +LL+KL P I L+P+ +G V K +++ + E +E +K N+
Sbjct: 420 EAEVRALLNKLQPGMISLDPNFVGKVDTVSDKRSREEKDLDRRPEDTIEKLK-----NRG 474
Query: 334 KGRN 337
+GRN
Sbjct: 475 RGRN 478
Score = 191 (72.3 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 50/167 (29%), Positives = 77/167 (46%)
Query: 56 SGRYMAAAGCKGYPYFYNRDGTELHCSKE-----HGEVLKLQFLLASINKLGQLRYQNVT 110
+ +Y A A K Y Y+ G ELH E L FLLAS G L+Y + +
Sbjct: 165 NNQYFAVAQKKSV-YIYDSQGVELHNLDRIVEPCFLEFLPYHFLLASAQMSGHLKYTDTS 223
Query: 111 MGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTM--------------LCHQGPVSAL 156
G++V T +G + NP+N ++ +GH GT+ L H+GPV ++
Sbjct: 224 TGQLVAEIPTKVGAPTSLAQNPWNAIMHVGHQNGTVTLWSPNTQTPLVKALVHRGPVRSM 283
Query: 157 AFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSRKDSG 203
A G M ++G+D K+++WD+R Y + + H S D G
Sbjct: 284 AIDRQGRYMVSTGQDLKMQVWDIRMYREVHSYSCHQPGAAVSISDRG 330
Score = 148 (57.2 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 31/84 (36%), Positives = 53/84 (63%)
Query: 2 LMPSEGGYLEAEG-VEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYM 60
L+ E G+LE EG +E+T+R++Q+ IA V I +++ ++++ L + GPY D+T +GR +
Sbjct: 69 LLEHEAGFLEPEGEMERTYRVRQDEIAASVGIETAKKKFELKLEDFGPYRADYTRNGREL 128
Query: 61 AAAGCKGY----PYFYNRDGTELH 80
AG KG+ + + G ELH
Sbjct: 129 LLAGRKGHIATMDWRNGKLGCELH 152
Score = 37 (18.1 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 6/25 (24%), Positives = 12/25 (48%)
Query: 232 PYEDVLGIGHSMGVSGILIPGSGEP 256
P+ ++ +GH G + P + P
Sbjct: 245 PWNAIMHVGHQNGTVTLWSPNTQTP 269
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 151 (58.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 44/189 (23%), Positives = 90/189 (47%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL---PGHAKTLDFSRKDSGDF 205
H GPV+ + FHPN +L+A+ D I+ WDL K++V+ + PG +++ F+ +
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY 247
Query: 206 SGSHNYNRYMGYSMVKGYQIGKVSFRPYEDV-------LGIGHSMG-VSGILIPGSGEPN 257
SG + R G+ + + + VS+ D+ +G+ S VS ++ +
Sbjct: 248 SGCQDSLRVYGWEPERCFDVVLVSWGKVADLAVCNDQLIGVAFSQSNVSSYVVDLTRVTR 307
Query: 258 FDSWVANPFETSKQRREKEVH--SLLDKL--PPETIMLNPSKIGTVREAKKKEKPTKQER 313
+ +P + S+ ++ H + L ++ P T P ++ E++++ P+ ++
Sbjct: 308 TGTVAQDPVQDSRPLAQQPAHPSAPLRRIYERPSTACNKPQRVKQNSESERRS-PSSEDD 366
Query: 314 EDEMEAAVE 322
DE E+ E
Sbjct: 367 RDERESRAE 375
>UNIPROTKB|F1RF38 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0031117 "positive regulation of microtubule depolymerization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0008352
"katanin complex" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
GO:GO:0008352 PANTHER:PTHR19845 OMA:NAISRTP GO:GO:0031117
EMBL:CU467555 Ensembl:ENSSSCT00000003113 Uniprot:F1RF38
Length = 521
Score = 149 (57.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 44/189 (23%), Positives = 91/189 (48%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL---PGHAKTLDFSRKDSGDF 205
H GPV+ + FHPN +L+A+ D I+ WDL K++V+ + PG +++ F+ +
Sbjct: 45 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY 104
Query: 206 SGSHNYNRYMGYSMVKGYQI-----GKVSFRPY--EDVLGIGHSMG-VSGILIPGSGEPN 257
SG + R G+ + + + GKV+ + ++G+ S VS ++ +
Sbjct: 105 SGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVVDLTRVTR 164
Query: 258 FDSWVANPFETSKQRREKEVH--SLLDKL--PPETIMLNPSKIGTVREAKKKEKPTKQER 313
+ +P + S+ ++ H + L ++ P T P ++ E++++ P+ ++
Sbjct: 165 TGTVAQDPVQDSRPLAQQPPHPSAPLRRIYERPSTACSKPQRVKQNSESERRS-PSSEDD 223
Query: 314 EDEMEAAVE 322
DE E+ E
Sbjct: 224 RDERESRAE 232
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 148 (57.2 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 44/189 (23%), Positives = 90/189 (47%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL---PGHAKTLDFSRKDSGDF 205
H GPV+ + FHPN +L+A+ D I+ WDL K++V+ + PG +++ F+ +
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLY 247
Query: 206 SGSHNYNRYMGYSMVKGYQI-----GKVSFRPY--EDVLGIGHSMG-VSGILIPGSGEPN 257
SG + R G+ + + + GKV+ ++G+ S VS ++ +
Sbjct: 248 SGCQDSLRVYGWEPERCFDVVLVHWGKVADLAICNNQLIGVAFSQSNVSSYVVDLTRVTR 307
Query: 258 FDSWVANPFETSKQRREKEVH--SLLDKL--PPETIMLNPSKIGTVREAKKKEKPTKQER 313
+ +P + S+ ++ H + L ++ P T P ++ E++++ P+ ++
Sbjct: 308 TGTVARDPVQDSRPPTQQPPHPSAPLRRIYERPSTACSKPQRVKQNSESERRS-PSSEDD 366
Query: 314 EDEMEAAVE 322
DE E+ E
Sbjct: 367 RDERESRAE 375
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 120 (47.3 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 140 GHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKT---LD 196
G+S H+GPV +L+F PNG +A++G+D ++K+WDL + + L GH + L
Sbjct: 12 GNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLA 71
Query: 197 FSRKDSG 203
FS DSG
Sbjct: 72 FS-PDSG 77
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 144 (55.7 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 43/189 (22%), Positives = 92/189 (48%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL---PGHAKTLDFSRKDSGDF 205
H GPV+ + FHPN +L+A+ D I+ WDL K++V+ + PG +++ F+ +
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY 247
Query: 206 SGSHNYNRYMGYSMVKGYQI-----GKVSFRPY--EDVLGIGHSMG-VSGILIPGSGEPN 257
SG + R G+ + + + GKV+ + ++G+ S VS ++ +
Sbjct: 248 SGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVVDLTRVTR 307
Query: 258 FDSWVANPFETSKQRREKEVHS--LLDKL--PPETIMLNPSKIGTVREAKKKEKPTKQER 313
+ +P + S+ + ++ + L ++ P T P ++ E++++ P+ ++
Sbjct: 308 TGTVTQDPVQASQPQTQQTPNPGVSLRRIYERPSTTCSKPQRVKHNSESERRS-PSSEDD 366
Query: 314 EDEMEAAVE 322
+DE E+ E
Sbjct: 367 KDERESRAE 375
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 137 (53.3 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 42/189 (22%), Positives = 90/189 (47%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL---PGHAKTLDFSRKDSGDF 205
H GPV+ + FHPN +L+A+ D I+ WDL K++V+ + PG +++ F+ +
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY 247
Query: 206 SGSHNYNRYMGYSMVKGYQI-----GKVSFRPY--EDVLGIGHSMG-VSGILIPGSGEPN 257
SG + R G+ + + + GKV+ + ++G+ S VS ++ +
Sbjct: 248 SGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVVDLTRVTR 307
Query: 258 FDSWVANPFETSKQRREKEVHS--LLDKL--PPETIMLNPSKIGTVREAKKKEKPTKQER 313
+ +P + ++ ++ + L ++ P T P ++ E++++ P+ ++
Sbjct: 308 TGTVTQDPVQANQPLTQQTPNPGVSLRRIYERPSTTCSKPQRVKHNSESERRS-PSSEDD 366
Query: 314 EDEMEAAVE 322
DE E+ E
Sbjct: 367 RDERESRAE 375
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 42/189 (22%), Positives = 88/189 (46%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL---PGHAKTLDFSRKDSGDF 205
H GPV+ + FHPN +L+A+ D I+ WDL K++V+ + PG +++ F+ +
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY 247
Query: 206 SGSHNYNRYMGYSMVKGYQI-----GKVSFRPY--EDVLGIGHSMG-VSGILIPGSGEPN 257
SG + R G+ + + + GKV+ + ++G+ S VS ++ +
Sbjct: 248 SGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVVDLTRVTR 307
Query: 258 FDSWVANPFETSKQRREK--EVHSLLDKL--PPETIMLNPSKIGTVREAKKKEKPTKQER 313
+ +P + + + + L ++ P T P ++ E++++ P+ ++
Sbjct: 308 TGTVARDPVQDHRPLAQPLPNPSAPLRRIYERPSTTCSKPQRVKQNSESERRS-PSSEDD 366
Query: 314 EDEMEAAVE 322
DE E+ E
Sbjct: 367 RDERESRAE 375
>TAIR|locus:2194589 [details] [associations]
symbol:AT1G10580 "AT1G10580" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 OMA:KRQKRGK
EMBL:BT030336 IPI:IPI00537876 RefSeq:NP_172528.2 UniGene:At.14984
ProteinModelPortal:A4FVN8 SMR:A4FVN8 IntAct:A4FVN8 STRING:A4FVN8
PaxDb:A4FVN8 PRIDE:A4FVN8 EnsemblPlants:AT1G10580.1 GeneID:837599
KEGG:ath:AT1G10580 TAIR:At1g10580 InParanoid:A4FVN8
PhylomeDB:A4FVN8 ProtClustDB:CLSN2690864 Genevestigator:A4FVN8
Uniprot:A4FVN8
Length = 573
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 37/132 (28%), Positives = 63/132 (47%)
Query: 149 HQGPVSALAFHPN-GHLMATSGKDCKIKIWDL-RKYEVLQTLPGHAKTL-DFSRKDSGDF 205
H VSA+ F P GHL+ ++G DCK+KIWD+ + ++T GHAK + D + G
Sbjct: 281 HTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSK 340
Query: 206 SGSHNYNRYMGY------SMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIPGSGEPNFD 259
+ Y++ + Y ++ + GK+ PY V+ + IL+ G +
Sbjct: 341 FLTAGYDKNIKYWDTETGQVISTFSTGKI---PY--VVKLNPDDDKQNILLAGMSDKKIV 395
Query: 260 SWVANPFETSKQ 271
W N E +++
Sbjct: 396 QWDINTGEVTQE 407
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 126 (49.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 29/100 (29%), Positives = 55/100 (55%)
Query: 101 LGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLC----HQGPVSAL 156
+G++R+ GE+ + ++ GRT ++ + V G G +L H+GPV +
Sbjct: 16 VGRVRFYGQHHGEVNCSAFSPDGRT-LLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSC 74
Query: 157 AFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLD 196
F P+G L+A+S D I++WD+ + + L L GH ++++
Sbjct: 75 CFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVE 114
>MGI|MGI:2443143 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2443143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524
KO:K14556 OMA:SIFAHDD HSSP:Q02793 CTD:10885 HOVERGEN:HBG013192
OrthoDB:EOG412M4S EMBL:AK050738 EMBL:AK050797 EMBL:BC063100
IPI:IPI00221822 RefSeq:NP_780761.1 UniGene:Mm.24591
ProteinModelPortal:Q8BHB4 SMR:Q8BHB4 STRING:Q8BHB4
PhosphoSite:Q8BHB4 PaxDb:Q8BHB4 PRIDE:Q8BHB4
Ensembl:ENSMUST00000052120 GeneID:269470 KEGG:mmu:269470
UCSC:uc008qqo.2 InParanoid:Q8BHB4 NextBio:392854 Bgee:Q8BHB4
Genevestigator:Q8BHB4 Uniprot:Q8BHB4
Length = 942
Score = 128 (50.1 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 30/77 (38%), Positives = 41/77 (53%)
Query: 137 VSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL- 195
+ G ++ H V L F P HL T+GKD KIK WD K+E +QTL GH + +
Sbjct: 619 LDFGDCHRSLFAHDDSVMYLRFVPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIW 678
Query: 196 DFSRKDSGDF--SGSHN 210
+ SGD+ S SH+
Sbjct: 679 CLAVSPSGDYVVSASHD 695
>RGD|1307480 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0031965 "nuclear membrane"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307480 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH474015 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD
CTD:10885 OrthoDB:EOG412M4S IPI:IPI00201140 RefSeq:NP_001101175.1
UniGene:Rn.12973 Ensembl:ENSRNOT00000026726 GeneID:310720
KEGG:rno:310720 NextBio:662507 Uniprot:D4A106
Length = 942
Score = 128 (50.1 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 30/77 (38%), Positives = 41/77 (53%)
Query: 137 VSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL- 195
+ G ++ H V L F P HL T+GKD KIK WD K+E +QTL GH + +
Sbjct: 619 LDFGDCHRSLFAHDDSVMHLRFVPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIW 678
Query: 196 DFSRKDSGDF--SGSHN 210
+ SGD+ S SH+
Sbjct: 679 CLAVSPSGDYVVSASHD 695
>UNIPROTKB|E1BM03 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD CTD:10885
EMBL:DAAA02007388 IPI:IPI00694068 RefSeq:NP_001179317.1
UniGene:Bt.25958 ProteinModelPortal:E1BM03 PRIDE:E1BM03
Ensembl:ENSBTAT00000026561 GeneID:514870 KEGG:bta:514870
NextBio:20871548 Uniprot:E1BM03
Length = 943
Score = 128 (50.1 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 30/77 (38%), Positives = 41/77 (53%)
Query: 137 VSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL- 195
+ G ++ H V L F P HL T+GKD KIK WD K+E +QTL GH + +
Sbjct: 620 LDFGDCHKSLFAHDDSVMYLRFVPKSHLFFTAGKDRKIKQWDADKFEHIQTLEGHHQEIW 679
Query: 196 DFSRKDSGDF--SGSHN 210
+ SGD+ S SH+
Sbjct: 680 CLAVSPSGDYVVSSSHD 696
>UNIPROTKB|Q9UNX4 [details] [associations]
symbol:WDR3 "WD repeat-containing protein 3" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 UniGene:Hs.310809
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:AF083217 IPI:IPI00009471 RefSeq:NP_006775.1
ProteinModelPortal:Q9UNX4 SMR:Q9UNX4 IntAct:Q9UNX4
MINT:MINT-1401247 STRING:Q9UNX4 PhosphoSite:Q9UNX4 DMDM:12230773
SWISS-2DPAGE:Q9UNX4 PaxDb:Q9UNX4 PeptideAtlas:Q9UNX4 PRIDE:Q9UNX4
Ensembl:ENST00000349139 GeneID:10885 KEGG:hsa:10885 UCSC:uc010oxe.1
CTD:10885 GeneCards:GC01P118472 HGNC:HGNC:12755 HPA:HPA027509
MIM:604737 neXtProt:NX_Q9UNX4 PharmGKB:PA37359 HOVERGEN:HBG013192
InParanoid:Q9UNX4 OrthoDB:EOG412M4S PhylomeDB:Q9UNX4 ChiTaRS:WDR3
GenomeRNAi:10885 NextBio:41331 ArrayExpress:Q9UNX4 Bgee:Q9UNX4
CleanEx:HS_WDR3 Genevestigator:Q9UNX4 GermOnline:ENSG00000065183
Uniprot:Q9UNX4
Length = 943
Score = 128 (50.1 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 30/77 (38%), Positives = 41/77 (53%)
Query: 137 VSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL- 195
+ G ++ H V L F P HL T+GKD KIK WD K+E +QTL GH + +
Sbjct: 620 LDFGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIW 679
Query: 196 DFSRKDSGDF--SGSHN 210
+ SGD+ S SH+
Sbjct: 680 CLAVSPSGDYVVSSSHD 696
>UNIPROTKB|F1SAY9 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:FP085476
EMBL:CU468902 Ensembl:ENSSSCT00000007369 Uniprot:F1SAY9
Length = 943
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 30/77 (38%), Positives = 41/77 (53%)
Query: 137 VSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL- 195
+ G ++ H V L F P HL T+GKD KIK WD K+E +QTL GH + +
Sbjct: 620 LDFGDCHKSLFAHDDSVMYLKFVPKSHLFFTAGKDRKIKQWDADKFEHVQTLEGHHQEIW 679
Query: 196 DFSRKDSGDF--SGSHN 210
+ SGD+ S SH+
Sbjct: 680 CLAISPSGDYVVSSSHD 696
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKT---LDFSRKDS 202
H+GPV LAF PNG +A++G+D ++K+WDL + + L GH T L FS+ S
Sbjct: 479 HRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSS 535
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 44/178 (24%), Positives = 77/178 (43%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHA---KTLDFSRKDSGDF 205
H V+ + FHPN +L+A+ D +K+WDL K+ ++ + G +++ F+ S +
Sbjct: 188 HTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLY 247
Query: 206 SGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIPGSGEPNFDSWVANP 265
SGS N R G+ + + + V + D L I ++ ++ N SW
Sbjct: 248 SGSENTLRVYGWEPDRCFDVVHVGWGKVSD-LAISNNQ----MIAVSYSHTNV-SWYVVD 301
Query: 266 FETSKQRREKEVHSLLDKLPPETIMLNPSKIGTVREAKKKEKPTKQEREDEMEAAVEA 323
K + + L+ P I S +GT + E+PT EM+ + EA
Sbjct: 302 LNRVK-KSGSVIQGLIQDKP---IPAPSSALGTTLR-RNYERPTTSCTGQEMKQSSEA 354
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 140 GHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAK---TLD 196
G+S H+GPV +LAF PNG +A++G+D ++K+WDL + + L GH +L
Sbjct: 458 GNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLT 517
Query: 197 FSRKDSG 203
FS DSG
Sbjct: 518 FS-PDSG 523
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 120 (47.3 bits), Expect = 0.00019, P = 0.00019
Identities = 47/170 (27%), Positives = 81/170 (47%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH---AKTLDFSRKDSGDF 205
H V+AL+FHP+G+ + T+ D +KI DL + +L TL GH A T+ FSR +G++
Sbjct: 228 HSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSR--TGEY 285
Query: 206 SGSHNYNRYM-----GYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIPGSG--EPNF 258
S + + + +V ++ KV RP + G+ V + PG G + +
Sbjct: 286 FASGGSDEQVMVWKSNFDVVDYREVIKVH-RPPAPLATSGNLPEVDFPVPPGGGRSQESV 344
Query: 259 DSWVANPFETSKQRREKEVHSL--LDKLPPETIMLNPSKIGTVREAKKKE 306
S + P + H + LD L +T+ + ++ T+ E K K+
Sbjct: 345 QSQLQEPISMPQTLTSTLEHIVGQLDVLT-QTVSILEQRL-TLTEDKLKQ 392
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 140 GHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL 195
G+S H+GPV ALAF PNG +A++G+D ++K+WDL + + L GH +
Sbjct: 458 GNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNI 513
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 113 (44.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPG 190
H GPV+ + FHPN +L+A+ D I+ WDL K++V+ + G
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEG 229
Score = 50 (22.7 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 24/130 (18%), Positives = 56/130 (43%)
Query: 205 FSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDV-------LGIGHSMG-VSGILIPGSGEP 256
+SG + R G+ + + + VS+ D+ +G+ S VS ++ +
Sbjct: 303 YSGCQDSLRVYGWEPERCFDVVLVSWGKVADLAVCNDQLIGVAFSQSNVSSYVVDLTRVT 362
Query: 257 NFDSWVANPFETSKQRREKEVH--SLLDKL--PPETIMLNPSKIGTVREAKKKEKPTKQE 312
+ +P + S+ ++ H + L ++ P T P ++ E++++ P+ ++
Sbjct: 363 RTGTVAQDPVQDSRPLAQQPAHPSAPLRRIYERPSTACNKPQRVKQNSESERRS-PSSED 421
Query: 313 REDEMEAAVE 322
DE E+ E
Sbjct: 422 DRDERESRAE 431
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 118 (46.6 bits), Expect = 0.00032, P = 0.00032
Identities = 45/170 (26%), Positives = 78/170 (45%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH---AKTLDFSRKDSGDF 205
H V+AL+FHP+G+ + T+ D +KI DL + +L TL GH A T+ FSR +G++
Sbjct: 228 HSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSR--TGEY 285
Query: 206 SGSHNYNRYM-----GYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIPGSG--EPNF 258
S + + + +V ++ +V P G V ++ PG G + +
Sbjct: 286 FASGGSDEQVMVWKSNFDIVDYGEVLRVQRPPATRASSSGTLPEVDPLVPPGRGRSQESM 345
Query: 259 DSWVANPFETSKQRREKEVHSL--LDKLPPETIMLNPSKIGTVREAKKKE 306
S P + H + LD L +T+ + ++ T+ E K K+
Sbjct: 346 QSHSQEPVSVPQSLTSTLEHIVGQLDVLT-QTVSILEQRL-TLTEDKLKQ 393
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 120 (47.3 bits), Expect = 0.00033, P = 0.00033
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 140 GHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKT---LD 196
G+S H+GPV +L+F PNG +A++G+D ++K+WDL + + L GH + L
Sbjct: 458 GNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLA 517
Query: 197 FSRKDSG 203
FS DSG
Sbjct: 518 FS-PDSG 523
>UNIPROTKB|H3BT67 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000569627 Bgee:H3BT67 Uniprot:H3BT67
Length = 117
Score = 95 (38.5 bits), Expect = 0.00041, P = 0.00041
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 146 MLCHQGPVSALAF-HPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSR 199
++ H VS+L +G L+AT G DC++ +W + K + +L GH ++ R
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVR 70
>UNIPROTKB|H3BTV8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0030424 GO:GO:0043025 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000566785 Bgee:H3BTV8 Uniprot:H3BTV8
Length = 79
Score = 95 (38.5 bits), Expect = 0.00041, P = 0.00041
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 146 MLCHQGPVSALAF-HPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSR 199
++ H VS+L +G L+AT G DC++ +W + K + +L GH ++ R
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVR 70
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 119 (46.9 bits), Expect = 0.00042, P = 0.00042
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 140 GHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL 195
G+S H+GPV +LAF PNG +A++G+D ++K+WDL + + L GH +
Sbjct: 458 GNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNI 513
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 121 (47.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAK---TLDFSRKDSGDF 205
H V++++ HP G+ +A++G D KIKIWDLR+ + TL + K T+ F++ SGD+
Sbjct: 271 HDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDITTVQFNQ--SGDY 328
Query: 206 ---SGSHN 210
GS N
Sbjct: 329 FATGGSQN 336
Score = 40 (19.1 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 5 SEGGYLEAEGVEKT---WRIKQE 24
++GGYL + +KT WR++ +
Sbjct: 141 ADGGYLLSSSDDKTLKLWRLQDK 163
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 118 (46.6 bits), Expect = 0.00054, P = 0.00054
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 140 GHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL 195
G+S H+GPV +LAF PNG +A++G+D ++K+WDL + + L GH +
Sbjct: 454 GNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNI 509
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 118 (46.6 bits), Expect = 0.00057, P = 0.00057
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 140 GHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL 195
G+S H+GPV +LAF PNG +A++G+D ++K+WDL + + L GH +
Sbjct: 476 GNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNI 531
>DICTYBASE|DDB_G0282793 [details] [associations]
symbol:wdr61 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000047
GenomeReviews:CM000152_GR eggNOG:COG2319 HSSP:P16649
RefSeq:XP_640180.1 ProteinModelPortal:Q54S59
EnsemblProtists:DDB0267163 GeneID:8623719 KEGG:ddi:DDB_G0282793
OMA:CIWDIKT ProtClustDB:CLSZ2430473 Uniprot:Q54S59
Length = 299
Score = 113 (44.8 bits), Expect = 0.00065, P = 0.00065
Identities = 54/235 (22%), Positives = 97/235 (41%)
Query: 1 WLMPSEGGYLEAEGVE---KTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSG 57
W + +G + G+ KTW Q L+ R +D + LG +LD
Sbjct: 17 WCVKWQGDIIATGGMGTKVKTWHGNQP------QFLTERKVFDKHI--LGVTSLDIDIGA 68
Query: 58 RYMAAAGCKGYPYFYNRDGTELHCSKEHGEV--LKLQFL-----LASINKLGQLRYQNVT 110
RY+A G G ++ LH + + G + LK+ FL L S+++ G + +V
Sbjct: 69 RYLATGGMDGTVRLFDLSTNTLHKTIDSGPLGCLKIGFLNSANNLVSVSESGNISIYSVE 128
Query: 111 MGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLC--------------HQGPVSAL 156
GE + + + + ++P N +++ GT+LC H P+ +L
Sbjct: 129 TGEKLRSISNTNKQVLTMAISPNNEQIAVAGLDGTVLCYDVESGRRVSEIKAHGVPIRSL 188
Query: 157 AFHPNGHLMATSGKDCKIKIWDLRKYE-VLQTLPGHAKTLDFS--RKDSGDFSGS 208
F + + T +D +I++ D + +L GH+ + FS +GD S
Sbjct: 189 CFSSDSKTIFTGAEDSQIRLHDPNSSNPYIASLLGHSSFI-FSLVASSNGDLLAS 242
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 115 (45.5 bits), Expect = 0.00072, P = 0.00072
Identities = 57/219 (26%), Positives = 94/219 (42%)
Query: 45 ELGPYTLDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEH------GEVLKLQFLLASI 98
EL LD+ S +Y ++ + F GTEL K+ V++LQ + +
Sbjct: 10 ELNGSILDYFESSQYKSS-----FEEFKKETGTELDVKKKGLLEKKWTSVIRLQKKVLDL 64
Query: 99 N-KLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALA 157
K+ QL + + G G G G+ D + P +++ GH C ++++
Sbjct: 65 EAKVAQLEEELNSGGGRGGG--RGRGKEDALPRPPEKHILT-GHRN----C----INSVK 113
Query: 158 FHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSRKDSGDFSGSHNYNRYMGY 217
FHP+ LM ++ +D IK+WD E +TL GH + +D DF + N +
Sbjct: 114 FHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAV----QDI-DFDKTGN----LLA 164
Query: 218 SMVKGYQIGKVSFRPYEDVLGI-GHSMGVSGILIPGSGE 255
S I F+ Y+ V + GH VS + SG+
Sbjct: 165 SCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGD 203
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 114 (45.2 bits), Expect = 0.00074, P = 0.00074
Identities = 26/63 (41%), Positives = 39/63 (61%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH---AKTLDFSRKDSGDF 205
H V+AL+FHP+G+ + T+ D +KI DL + +L TL GH A T+ FSR +G++
Sbjct: 259 HSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSR--TGEY 316
Query: 206 SGS 208
S
Sbjct: 317 FAS 319
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 114 (45.2 bits), Expect = 0.00075, P = 0.00075
Identities = 44/170 (25%), Positives = 81/170 (47%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH---AKTLDFSRKDSGDF 205
H V+ L+FHP+G+ + T+ D +KI DL + +L TL GH A T+ FSR +G++
Sbjct: 190 HSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSR--TGEY 247
Query: 206 SGSHNYNRYM-----GYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIPGSGEPNFDS 260
S + + + +V ++ KV P +G+ V + PG G + +S
Sbjct: 248 FASGGSDEQVMVWKSNFDIVDHGEVTKVPRPPATLASSMGNLPEVDFPVPPGRGR-SVES 306
Query: 261 WVANPFE--TSKQRREKEVHSLLDKLP--PETIMLNPSKIGTVREAKKKE 306
+ P E + Q + ++ +L +T+ + ++ T+ E K K+
Sbjct: 307 VQSQPQEPVSVPQTLTSTLEHIVGQLDVLTQTVSILEQRL-TLTEDKLKQ 355
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 113 (44.8 bits), Expect = 0.00076, P = 0.00076
Identities = 26/63 (41%), Positives = 39/63 (61%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH---AKTLDFSRKDSGDF 205
H V+AL+FHP+G+ + T+ D +KI DL + +L TL GH A T+ FSR +G++
Sbjct: 228 HSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSR--TGEY 285
Query: 206 SGS 208
S
Sbjct: 286 FAS 288
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 114 (45.2 bits), Expect = 0.00088, P = 0.00088
Identities = 44/170 (25%), Positives = 81/170 (47%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH---AKTLDFSRKDSGDF 205
H V+ L+FHP+G+ + T+ D +KI DL + +L TL GH A T+ FSR +G++
Sbjct: 228 HSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSR--TGEY 285
Query: 206 SGSHNYNRYM-----GYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIPGSGEPNFDS 260
S + + + +V ++ KV P +G+ V + PG G + +S
Sbjct: 286 FASGGSDEQVMVWKSNFDIVDHGEVTKVPRPPATLASSMGNLPEVDFPVPPGRGR-SVES 344
Query: 261 WVANPFE--TSKQRREKEVHSLLDKLP--PETIMLNPSKIGTVREAKKKE 306
+ P E + Q + ++ +L +T+ + ++ T+ E K K+
Sbjct: 345 VQSQPQEPVSVPQTLTSTLEHIVGQLDVLTQTVSILEQRL-TLTEDKLKQ 393
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 115 (45.5 bits), Expect = 0.00095, P = 0.00095
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL 188
H GPV+A+AF NG+ +AT +D +K+WDLRK + +T+
Sbjct: 392 HSGPVTAIAFSENGYYLATGAQDSSLKLWDLRKLKNFKTI 431
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.136 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 378 345 0.00097 116 3 11 22 0.43 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 47
No. of states in DFA: 616 (65 KB)
Total size of DFA: 246 KB (2132 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.03u 0.09s 33.12t Elapsed: 00:00:02
Total cpu time: 33.03u 0.09s 33.12t Elapsed: 00:00:02
Start: Sat May 11 09:58:03 2013 End: Sat May 11 09:58:05 2013