BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046394
(378 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5TJE7|WDR46_CANFA WD repeat-containing protein 46 OS=Canis familiaris GN=WDR46 PE=3
SV=1
Length = 612
Score = 218 bits (555), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 148/448 (33%), Positives = 227/448 (50%), Gaps = 77/448 (17%)
Query: 2 LMPSEGGYLEAEGVEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMA 61
L+ E G+LE E E T +I+Q I VDI S+ +D+ L + GPY L+++ GR++A
Sbjct: 153 LLAEEPGFLEGEDGEDTAKIRQAEIVEAVDIASAAKHFDLNLRQFGPYRLNYSPVGRHLA 212
Query: 62 AAGCKGYP----------------------------------------YFYNRDGTELHC 81
G +G+ + Y+ G ELHC
Sbjct: 213 FGGHRGHVATLDWVTKRLMCEINVMEAVRDIRFLHSEALFAVAQNRWLHIYDNQGIELHC 272
Query: 82 SKEHGEVLKLQFL-----LASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGV 136
+ V +L+FL LA+ ++ G L Y +V++G+IV GR DV+ NP+N V
Sbjct: 273 IRRCDRVTRLEFLPFHFLLATASETGFLTYLDVSVGKIVAALNARAGRLDVMTKNPYNAV 332
Query: 137 VSLGHSGGT--------------MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLR-K 181
+ LGHS GT +LCH+G V A+A G MATSG D ++KI+DLR
Sbjct: 333 IHLGHSNGTVSLWSPAMKEPLAKILCHRGGVRAVAVDSTGTYMATSGLDHQLKIFDLRGM 392
Query: 182 YEVL--QTLPGHAKTLDFSRKDSGDFSGSHNYNRYMGYSMV------KGYQIGKVS---- 229
++ L +TLP A L FS++ S N +MG M + Y ++S
Sbjct: 393 FQPLSARTLPQGAGHLAFSQRGLLAAGMSDVVNIWMGQGMASPPSLEQPYLTHRLSGHVH 452
Query: 230 ---FRPYEDVLGIGHSMGVSGILIPGSGEPNFDSWVANPFETSKQRREKEVHSLLDKLPP 286
F P+EDVLG+GHS G++ +L+PG+ EPNFD NP+ + KQR+E EV +LL+K+P
Sbjct: 453 GLHFCPFEDVLGLGHSGGITSMLVPGAAEPNFDGLENNPYRSQKQRQEWEVKALLEKVPA 512
Query: 287 ETIMLNPSKIGTVREAKKKEKPTKQEREDEMEAAVEAVKGFVWKNKTKGRNKPSKKAKKK 346
E I L+P + V +++ K+ER + + EA F K K KGR+ + K++
Sbjct: 513 ELICLDPRALAEVDVISLEQE--KKERIERLGYDPEAKAPFQPKPKQKGRSSTASLVKRR 570
Query: 347 QELVAKAKRPFLDQQLKEEQSLSKKKQK 374
++++ K R + Q L+++ +KK K
Sbjct: 571 RKVMDKEHRDKVRQSLEQQPQKQEKKAK 598
>sp|P40055|UTP7_YEAST U3 small nucleolar RNA-associated protein 7 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UTP7 PE=1
SV=1
Length = 554
Score = 209 bits (533), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 142/481 (29%), Positives = 232/481 (48%), Gaps = 114/481 (23%)
Query: 1 WLMPSEGGYLEAEG-VEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRY 59
+L+P GYLE E +EKT++++Q I VD+ ++ D+ L E GPY + + +G +
Sbjct: 65 YLLPESNGYLEPENELEKTFKVQQSEIKSSVDVSTANKALDLSLKEFGPYHIKYAKNGTH 124
Query: 60 MAAAGCKG----------------------------------------YPYFYNRDGTEL 79
+ G KG Y + Y+ +GTEL
Sbjct: 125 LLITGRKGHVASMDWRKGQLRAELFLNETCHSATYLQNEQYFAVAQKKYTFIYDHEGTEL 184
Query: 80 HCSKEHGEVLKLQFL-----LASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFN 134
H K+H E L FL L + + G L+Y +V+ G++V T G T + NP+N
Sbjct: 185 HRLKQHIEARHLDFLPYHYLLVTAGETGWLKYHDVSTGQLVSELRTKAGPTMAMAQNPWN 244
Query: 135 GVVSLGHSGGT--------------MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLR 180
V+ LGHS GT +L +GPV+++A +G+ MAT+G D +KIWD+R
Sbjct: 245 AVMHLGHSNGTVSLWSPSMPEPLVKLLSARGPVNSIAIDRSGYYMATTGADRSMKIWDIR 304
Query: 181 KYEVLQTL-----PGHAKT------LDFSR-------KDSGDFSGS------------HN 210
++ L ++ PG + L SR KD+ SG H
Sbjct: 305 NFKQLHSVESLPTPGTNVSISDTGLLALSRGPHVTLWKDALKLSGDSKPCFGSMGGNPHR 364
Query: 211 YNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIPGSGEPNFDSWVANPFETSK 270
YM + + G ++ + F P+ED+LG+GH G++ +++PG+GE N+D+ NPFET K
Sbjct: 365 NTPYMSH-LFAGNKVENLGFVPFEDLLGVGHQTGITNLIVPGAGEANYDALELNPFETKK 423
Query: 271 QRREKEVHSLLDKLPPETIMLNPSKIGTVREAKKKEKPTKQEREDEMEAAVEAVKGFVWK 330
QR+E+EV +LL+KLP +TI L+P+ IG+V K+ + +D + ++A
Sbjct: 424 QRQEQEVRTLLNKLPADTITLDPNSIGSV---DKRSSTIRLNAKDLAQTTMDA------N 474
Query: 331 NKTKGRN-----KPSKKAK---------KKQELVAKAKRPFLDQQLKEEQSLSKKKQKLS 376
NK K + KP K K KK + V ++ + +QL +E+++ K+ ++
Sbjct: 475 NKAKTNSDIPDVKPDVKGKNSGLRSFLRKKTQNVIDERKLRVQKQLDKEKNIRKRNHQIK 534
Query: 377 E 377
+
Sbjct: 535 Q 535
>sp|Q9P4X3|UTP7_SCHPO Probable U3 small nucleolar RNA-associated protein 7
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=utp7 PE=3 SV=1
Length = 520
Score = 209 bits (532), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 150/458 (32%), Positives = 221/458 (48%), Gaps = 103/458 (22%)
Query: 8 GYLEAEGVEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGCKG 67
G LEAEG+E+T++ +Q+ +A V + ++ + + L + G Y+ D+T GR + G KG
Sbjct: 64 GLLEAEGLERTYKFRQDQLAPNVALETATKSFSLDLDKFGGYSFDYTRDGRMILLGGRKG 123
Query: 68 ----------------------------------------YPYFYNRDGTELHCSKEHGE 87
Y Y Y+ GTE+HC K H E
Sbjct: 124 HISAFDWRTGKLLTELHLRETVRDVKWFHNHQYFAVAQKKYVYVYDNMGTEIHCLKRHIE 183
Query: 88 VLKLQFL-----LASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHS 142
V L FL L SI G L+YQ+V+ G++V TG+G + V+ NP N V +GH+
Sbjct: 184 VNALDFLPYHLLLTSIGNAGYLKYQDVSTGQLVAEHRTGMGASHVLHQNPHNAVEHVGHA 243
Query: 143 GGT--------------MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL 188
G ML H+GPV LA + +G M T+G D +K+WDLR Y+ L +
Sbjct: 244 NGQVTLWSPSSTTPLVKMLTHRGPVRDLAVNRDGRYMVTAGADSLLKVWDLRTYKELHSY 303
Query: 189 --PGHAKTLDFSRKDSGDFS---GSH------------NYNRYMGYSMVKGYQIGKVSFR 231
P A+ L S D G + G H N+ YM + ++ + + +
Sbjct: 304 YTPTPAQRLTLS--DRGLLAVGWGPHATIWKDALRTKQNFP-YMNH-LLPSSSVVDLHYC 359
Query: 232 PYEDVLGIGHSMGVSGILIPGSGEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETIML 291
PYED+LGIGH+ G I++PGSGEPN+DS+ +PF + KQR+E EV LL+KL PE I L
Sbjct: 360 PYEDILGIGHAKGFESIIVPGSGEPNYDSYENDPFASRKQRQETEVRQLLEKLRPEMISL 419
Query: 292 NPSKIGTVREAKKKEKPTKQEREDEMEAAVEAVKGFVWKNKTKGRNKPSKKAKKKQELVA 351
N IG V ++ R+ E E + +V K K +G+N ++ +K
Sbjct: 420 NADFIGNV------DRAAPSLRKAEAEEEKPPEEKWVPKAKARGKNSALRRYLRKH---- 469
Query: 352 KAKRPFLDQ-QLKEEQSLS----------KKKQKLSEE 378
R +DQ +LK E+SL +++QKL EE
Sbjct: 470 --ARNVVDQRRLKVEKSLEIEKKMRAQRVRREQKLPEE 505
>sp|O15213|WDR46_HUMAN WD repeat-containing protein 46 OS=Homo sapiens GN=WDR46 PE=1 SV=3
Length = 610
Score = 208 bits (530), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 142/440 (32%), Positives = 223/440 (50%), Gaps = 77/440 (17%)
Query: 2 LMPSEGGYLEAEGVEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMA 61
L+ E G+LE E E T +I Q I VDI S+ +D+ L + GPY L+++ +GR++A
Sbjct: 152 LLAEEPGFLEGEDGEDTAKICQADIVEAVDIASAAKHFDLNLRQFGPYRLNYSRTGRHLA 211
Query: 62 AAGCKGYP----------------------------------------YFYNRDGTELHC 81
G +G+ + Y+ G ELHC
Sbjct: 212 FGGRRGHVAALDWVTKKLMCEINVMEAVRDIRFLHSEALLAVAQNRWLHIYDNQGIELHC 271
Query: 82 SKEHGEVLKLQFL-----LASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGV 136
+ V +L+FL LA+ ++ G L Y +V++G+IV GR DV+ NP+N V
Sbjct: 272 IRRCDRVTRLEFLPFHFLLATASETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAV 331
Query: 137 VSLGHSGGT--------------MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLR-K 181
+ LGHS GT +LCH+G V A+A G MATSG D ++KI+DLR
Sbjct: 332 IHLGHSNGTVSLWSPAMKEPLAKILCHRGGVRAVAVDSTGTYMATSGLDHQLKIFDLRGT 391
Query: 182 YEVL--QTLPGHAKTLDFSRKDSGDFSGSHNYNRYMGY------SMVKGYQIGKVS---- 229
Y+ L +TLP A L FS++ N + G S+ + Y ++S
Sbjct: 392 YQPLSTRTLPHGAGHLAFSQRGLLVAGMGDVVNIWAGQGKASPPSLEQPYLTHRLSGPVH 451
Query: 230 ---FRPYEDVLGIGHSMGVSGILIPGSGEPNFDSWVANPFETSKQRREKEVHSLLDKLPP 286
F P+EDVLG+GH+ G++ +L+PG+GEPNFD +NP+ + KQR+E EV +LL+K+P
Sbjct: 452 GLQFCPFEDVLGVGHTGGITSMLVPGAGEPNFDGLESNPYRSRKQRQEWEVKALLEKVPA 511
Query: 287 ETIMLNPSKIGTVREAKKKEKPTKQEREDEMEAAVEAVKGFVWKNKTKGRNKPSKKAKKK 346
E I L+P + V ++ K+E+ + + +A F K K KGR+ + K+K
Sbjct: 512 ELICLDPRALAEVDVISLEQ--GKKEQIERLGYDPQAKAPFQPKPKQKGRSSTASLVKRK 569
Query: 347 QELVAKAKRPFLDQQLKEEQ 366
++++ + R + Q L+++
Sbjct: 570 RKVMDEEHRDKVRQSLQQQH 589
>sp|Q9Z0H1|WDR46_MOUSE WD repeat-containing protein 46 OS=Mus musculus GN=Wdr46 PE=2 SV=1
Length = 622
Score = 204 bits (520), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 142/437 (32%), Positives = 217/437 (49%), Gaps = 77/437 (17%)
Query: 2 LMPSEGGYLEAEGVEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMA 61
L+ E G+L E E T +I Q I VDI S+ +D+ L + GPY L+++ +GR++A
Sbjct: 151 LLAEEPGFLVGEDGEDTAKILQTDIVEAVDIASAAKHFDLNLRQFGPYRLNYSRTGRHLA 210
Query: 62 AAGCKGYP----------------------------------------YFYNRDGTELHC 81
G +G+ Y Y+ G ELHC
Sbjct: 211 LGGRRGHVAALDWVTKKLMCEINVMEAVRDIHFLHSEALLAVAQNRWLYIYDNQGIELHC 270
Query: 82 SKEHGEVLKLQFL-----LASINKLGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGV 136
+ V +L+FL LA+ ++ G L Y +V++G+IV GR V+ NP+N V
Sbjct: 271 IRRCDRVTRLEFLPFHFLLATTSETGFLTYLDVSVGKIVTALNVRAGRLSVMAQNPYNAV 330
Query: 137 VSLGHSGGT--------------MLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLR-K 181
+ LGHS GT +LCH+G V A+A G MATSG D ++KI+DLR
Sbjct: 331 IHLGHSNGTVSLWSPAVKEPLAKILCHRGGVRAVAVDSTGTYMATSGLDHQLKIFDLRGT 390
Query: 182 YEVL--QTLPGHAKTLDFSRKDSGDFSGSHNYNRYMGY------SMVKGYQIGKVS---- 229
++ L +TLP A L FS++ N + G S+ + Y ++S
Sbjct: 391 FQPLSSRTLPQGAGHLAFSQRGLLVAGMGDVVNIWAGQGKASPPSLEQPYLTHRLSGHVH 450
Query: 230 ---FRPYEDVLGIGHSMGVSGILIPGSGEPNFDSWVANPFETSKQRREKEVHSLLDKLPP 286
F P+EDVLG+GHS G + +L+PG+ EPNFD NP+ + KQR+E EV +LL+K+P
Sbjct: 451 GLQFCPFEDVLGVGHSGGFTSMLVPGAAEPNFDGLENNPYRSRKQRQEWEVKALLEKVPA 510
Query: 287 ETIMLNPSKIGTVREAKKKEKPTKQEREDEMEAAVEAVKGFVWKNKTKGRNKPSKKAKKK 346
E I LNP + V +++ K+ER + + +A F K K KGR+ + K+K
Sbjct: 511 ELICLNPRALAEVDVVTLEQQ--KKERIERLGYDPDAKAAFQPKAKQKGRSSTASLVKRK 568
Query: 347 QELVAKAKRPFLDQQLK 363
++++ + R + Q L+
Sbjct: 569 KKVMDQEHRDKVRQSLE 585
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL---PGHAKTLDFSRKDSGDF 205
H GPV+ + FHPN +L+A+ D I+ WDL K++V+ + PG +++ F+ +
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY 247
Query: 206 SGSHNYNRYMGYSMVKGYQIGKVSFRPYEDV 236
SG + R G+ + + + V++ D+
Sbjct: 248 SGCQDSLRVYGWEPERCFDVVLVNWGKVADL 278
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSR 199
T++ H+ + +L FHP G +A+ +D IK+WD+R+ + GH++ + R
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Score = 40.8 bits (94), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 13/108 (12%)
Query: 146 MLCHQGPVSALAF-HPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSRKDS-- 202
++ H VS+L +G L+AT G DC++ +W + K + +L GH ++ R ++
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 203 -----GDFSGSHNY-----NRYMGYSMVKGYQIGKVSFRPYEDVLGIG 240
G SGS + + M I + F PY + + G
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASG 123
Score = 38.9 bits (89), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHA 192
H V L F P+G +A++ D +K+WDL +++ PGH
Sbjct: 146 HSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 18/129 (13%)
Query: 90 KLQFLLASINKLGQLRYQNVTMGEIVGNFWTGLG---RTDVIRVNPFNGVVSLGHSGGTM 146
KLQ ++A + + L +G+ G G R ++ +N N ++SL
Sbjct: 12 KLQEIVAHASNVSSL-----VLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTG----- 61
Query: 147 LCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAK---TLDFSRKDSG 203
H PV ++ + L+ + I++WDL ++L+TL GH +LDF
Sbjct: 62 --HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEF 119
Query: 204 DFSGSHNYN 212
SGS + N
Sbjct: 120 VASGSQDTN 128
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL---PGHAKTLDFSRKDSGDF 205
H GPV+ + FHPN +L+A+ D I+ WDL K++V+ + PG +++ F+ +
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY 247
Query: 206 SGSHNYNRYMGYSMVKGYQIGKVSFRPYEDV 236
SG + R G+ + + + V++ D+
Sbjct: 248 SGCQDSLRVYGWEPERCFDVVLVNWGKVADL 278
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSR 199
T++ H+ + +L FHP G +A+ +D IK+WD+R+ + GH++ + R
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Score = 40.8 bits (94), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 13/108 (12%)
Query: 146 MLCHQGPVSALAF-HPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSRKDS-- 202
++ H VS+L +G L+AT G DC++ +W + K + +L GH ++ R ++
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 203 -----GDFSGSHNY-----NRYMGYSMVKGYQIGKVSFRPYEDVLGIG 240
G SGS + + M I + F PY + + G
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASG 123
Score = 38.9 bits (89), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH 191
H V L F P+G +A++ D +K+WDL +++ PGH
Sbjct: 146 HSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 18/129 (13%)
Query: 90 KLQFLLASINKLGQLRYQNVTMGEIVGNFWTGLG---RTDVIRVNPFNGVVSLGHSGGTM 146
KLQ ++A + + L +G+ G G R ++ +N N ++SL
Sbjct: 12 KLQEIVAHASNVSSL-----VLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTG----- 61
Query: 147 LCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAK---TLDFSRKDSG 203
H PV ++ + L+ + I++WDL ++L+TL GH +LDF
Sbjct: 62 --HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEF 119
Query: 204 DFSGSHNYN 212
SGS + N
Sbjct: 120 VASGSQDTN 128
>sp|Q9UNX4|WDR3_HUMAN WD repeat-containing protein 3 OS=Homo sapiens GN=WDR3 PE=1 SV=1
Length = 943
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 137 VSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL- 195
+ G ++ H V L F P HL T+GKD KIK WD K+E +QTL GH + +
Sbjct: 620 LDFGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIW 679
Query: 196 DFSRKDSGDFSGSHNYNRYM 215
+ SGD+ S ++++ +
Sbjct: 680 CLAVSPSGDYVVSSSHDKSL 699
Score = 35.8 bits (81), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH 191
H+ ++ F +L+ TSGKD +K WDL +T+ GH
Sbjct: 148 HKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQHCFKTMVGH 190
>sp|Q8BHB4|WDR3_MOUSE WD repeat-containing protein 3 OS=Mus musculus GN=Wdr3 PE=2 SV=1
Length = 942
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 137 VSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL- 195
+ G ++ H V L F P HL T+GKD KIK WD K+E +QTL GH + +
Sbjct: 619 LDFGDCHRSLFAHDDSVMYLRFVPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIW 678
Query: 196 DFSRKDSGDFSGSHNYNRYM 215
+ SGD+ S ++++ +
Sbjct: 679 CLAVSPSGDYVVSASHDKSL 698
Score = 36.2 bits (82), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 116 GNFWTGLGRTDVIRVNPFNGVVSLGHSGGTML-CHQGPVSALAFHPNGHLMATSGKDCKI 174
G +G TDVI + N SG L H+ V+ F +L+ TSGKD +
Sbjct: 120 GRLASGSKDTDVIIWDVIN------ESGLYRLKGHKDAVTQALFLRERNLLVTSGKDTMV 173
Query: 175 KIWDLRKYEVLQTLPGH 191
K WDL +T+ GH
Sbjct: 174 KWWDLDNQHCFKTMVGH 190
>sp|Q5JTN6|WDR38_HUMAN WD repeat-containing protein 38 OS=Homo sapiens GN=WDR38 PE=2 SV=1
Length = 314
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 32/48 (66%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLD 196
H GPV F P+GHL A++ DC +++WD+ + + L+ L GH ++++
Sbjct: 62 HTGPVKFCRFSPDGHLFASASCDCTVRLWDVARAKCLRVLKGHQRSVE 109
Score = 40.4 bits (93), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSRKDSGDFSGS 208
HQ V ++F P+ +A+ G D ++ +WD++ ++L+ L GH ++ S DFS +
Sbjct: 104 HQRSVETVSFSPDSRQLASGGWDKRVMLWDVQSGQMLRLLVGHRDSI-----QSSDFSPT 158
Query: 209 HNYNRYMGY-SMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIPGSGEPNFDSW 261
N + S V + + V+ L GHS +S + SG SW
Sbjct: 159 VNCLATGSWDSTVHIWDLRMVTPAVSHQALE-GHSANISCLCYSASGLLASGSW 211
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 12/104 (11%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSR--KDSGDFS 206
H G V++ AF P+G ++ T +D + W+ R ++L L GH + F R D F+
Sbjct: 20 HGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHLFA 79
Query: 207 GSH--------NYNRYMGYSMVKGYQ--IGKVSFRPYEDVLGIG 240
+ + R ++KG+Q + VSF P L G
Sbjct: 80 SASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASG 123
>sp|A0DB19|LIS11_PARTE Lissencephaly-1 homolog 1 OS=Paramecium tetraurelia
GN=GSPATT00015130001 PE=3 SV=1
Length = 403
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 140 GHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH---AKTLD 196
GH T+ H V+ LAF P G + ++ D IKIW+L+ + ++TL GH T+
Sbjct: 137 GHFEKTLKGHTSNVNCLAFDPTGKYICSASSDLSIKIWELKNHTCVKTLIGHEHSVSTVQ 196
Query: 197 FSRKDSGDF 205
FS D GDF
Sbjct: 197 FS--DHGDF 203
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 19/128 (14%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSRKD-SGDFSG 207
H+ V+ +AFHP ++ ++ D IK+WD +TL GH ++ D +G +
Sbjct: 104 HRAGVNCVAFHPQYQILGSASDDGSIKLWDYESGHFEKTLKGHTSNVNCLAFDPTGKYIC 163
Query: 208 SHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGI--------LIPGSGEPNFD 259
S + + + +K + K IGH VS + ++ S + N
Sbjct: 164 SASSDLSIKIWELKNHTCVKTL---------IGHEHSVSTVQFSDHGDFILSASRDKNIK 214
Query: 260 SW-VANPF 266
W VA F
Sbjct: 215 LWEVATGF 222
>sp|Q9D994|WDR38_MOUSE WD repeat-containing protein 38 OS=Mus musculus GN=Wdr38 PE=2 SV=1
Length = 303
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 101 LGQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLC----HQGPVSAL 156
+G++R+ GE+ + ++ GRT ++ + V G G +L H+GPV +
Sbjct: 16 VGRVRFYGQHHGEVNCSAFSPDGRT-LLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSC 74
Query: 157 AFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLD 196
F P+G L+A+S D I++WD+ + + L L GH ++++
Sbjct: 75 CFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVE 114
Score = 32.3 bits (72), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL---DFSRKDSGDF 205
HQ V ++F P+ +A+ G D + +W+++ + L GH ++ DFS
Sbjct: 109 HQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLA 168
Query: 206 SGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIPGSGEPNFDSW 261
+GS + ++ + + + VS+ E GH+ +S + SG SW
Sbjct: 169 TGSWDSTVHI-WDLRASTPV--VSYHNLE-----GHTGNISCLCYSASGLLASGSW 216
>sp|P0CS42|LIS1_CRYNJ Nuclear distribution protein PAC1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=PAC1 PE=3 SV=1
Length = 433
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL 195
T+ H+ PV+ LAFHP L+A++ +D +K+WD ++ +TL GH K +
Sbjct: 100 TLASHRAPVTRLAFHPTWTLLASASEDATVKLWDWEAGDMERTLKGHTKAV 150
Score = 40.4 bits (93), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSRKDSGD 204
T++ H + AL FHP+G + ++ D IK+WDL +T+ H+
Sbjct: 336 TLVGHDNWIRALVFHPSGKYLLSASDDKTIKVWDLANGRCTKTIEAHSH----------- 384
Query: 205 FSGSHNYNRYMGYS 218
F S + R +G S
Sbjct: 385 FVTSMTWGRAVGAS 398
Score = 37.0 bits (84), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDL-RKYEVLQTLPGHAKTLDFSR 199
T+ H V + F P G LMAT D +K+WD +Y ++TL GH ++ R
Sbjct: 142 TLKGHTKAVMDVDFDPRGGLMATCSSDLTLKLWDTANQYTNVKTLHGHDHSVSSVR 197
Score = 35.8 bits (81), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAK 193
T+ H VS++ F P+G + ++ +D I++W + ++T GHA+
Sbjct: 185 TLHGHDHSVSSVRFMPDGETLVSASRDKTIRVWQVSSGYCIKTFSGHAE 233
>sp|P0CS43|LIS1_CRYNB Nuclear distribution protein PAC1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=PAC1 PE=3 SV=1
Length = 433
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL 195
T+ H+ PV+ LAFHP L+A++ +D +K+WD ++ +TL GH K +
Sbjct: 100 TLASHRAPVTRLAFHPTWTLLASASEDATVKLWDWEAGDMERTLKGHTKAV 150
Score = 40.4 bits (93), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSRKDSGD 204
T++ H + AL FHP+G + ++ D IK+WDL +T+ H+
Sbjct: 336 TLVGHDNWIRALVFHPSGKYLLSASDDKTIKVWDLANGRCTKTIEAHSH----------- 384
Query: 205 FSGSHNYNRYMGYS 218
F S + R +G S
Sbjct: 385 FVTSMTWGRAVGAS 398
Score = 37.0 bits (84), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDL-RKYEVLQTLPGHAKTLDFSR 199
T+ H V + F P G LMAT D +K+WD +Y ++TL GH ++ R
Sbjct: 142 TLKGHTKAVMDVDFDPRGGLMATCSSDLTLKLWDTANQYTNVKTLHGHDHSVSSVR 197
Score = 35.8 bits (81), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAK 193
T+ H VS++ F P+G + ++ +D I++W + ++T GHA+
Sbjct: 185 TLHGHDHSVSSVRFMPDGETLVSASRDKTIRVWQVSSGYCIKTFSGHAE 233
>sp|Q4V7Y7|KTNB1_XENLA Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis
GN=katnb1 PE=1 SV=1
Length = 655
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 16/123 (13%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVL-----QTLPGHAKTLDFSRKDSG 203
H+GPV+ + FHPN +L+A+ D ++ WDL K++++ +T+P + + FS
Sbjct: 188 HKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLVGCTEGETIP--VRAILFSNDGGC 245
Query: 204 DFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHS--MGVSGILIPGSGEPNFDSW 261
F G + R G+ + + V + D L I ++ +GVS S + N S+
Sbjct: 246 IFCGGKDSLRVYGWEPDQCFDTVPVGWGKVSD-LAICNNQLIGVS------SAQSNISSF 298
Query: 262 VAN 264
V +
Sbjct: 299 VVD 301
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH---AKTLDFSRKD 201
T++ H+ VS+L FHP G +A+ D IK+WD+R+ + GH + L FS
Sbjct: 100 TLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDG 159
Query: 202 SGDFSGSHNYNRYMGYSMVKGYQIGKVS----------FRPYEDVLGIGHS 242
S S +++ + + + G + ++S F P E +L G +
Sbjct: 160 KWLASASDDHSVKL-WDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSA 209
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Query: 124 RTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYE 183
R + VN N ++SL H PV ++ F+ + L+ + ++IWDL +
Sbjct: 44 RVHLWSVNKPNCIMSLTG-------HTTPVESVRFNNSEELIVAGSQSGSLRIWDLEAAK 96
Query: 184 VLQTLPGH---AKTLDFSRKDSGDFSGSHNYN 212
+L+TL GH +LDF SGS + N
Sbjct: 97 ILRTLMGHKANVSSLDFHPYGEFVASGSLDTN 128
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 146 MLCHQGPVSALAF-HPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSR 199
++ H VS++ +G L+AT G DC++ +W + K + +L GH ++ R
Sbjct: 16 IVAHGCSVSSVVLGRSSGRLVATGGDDCRVHLWSVNKPNCIMSLTGHTTPVESVR 70
Score = 37.0 bits (84), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 64/158 (40%), Gaps = 21/158 (13%)
Query: 55 SSGRYMAAAG--CKGYPYFYNRDGTELHCSKEHGEVLKLQF-----LLASINKLGQLRYQ 107
SSGR +A G C+ + + N+ + + V ++F L+ + ++ G LR
Sbjct: 31 SSGRLVATGGDDCRVHLWSVNKPNCIMSLTGHTTPVESVRFNNSEELIVAGSQSGSLRIW 90
Query: 108 NVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTML--------C------HQGPV 153
++ +I+ + +P+ V+ G + C H V
Sbjct: 91 DLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAV 150
Query: 154 SALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH 191
L F P+G +A++ D +K+WDL +++ L H
Sbjct: 151 RCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEH 188
>sp|A0CH87|LIS12_PARTE Lissencephaly-1 homolog 2 OS=Paramecium tetraurelia
GN=GSPATT00007594001 PE=3 SV=1
Length = 403
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 140 GHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH---AKTLD 196
GH T+ H V+ LAF P G + ++ D IK+W+L+ + ++TL GH T+
Sbjct: 137 GHFEKTLKGHTSNVNCLAFDPTGKYICSASSDLSIKLWELKNHTCVKTLIGHEHSVSTVQ 196
Query: 197 FSRKDSGDF 205
FS D GDF
Sbjct: 197 FS--DHGDF 203
Score = 39.3 bits (90), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 18/128 (14%)
Query: 129 RVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL 188
R+ PF GH G V+ +AFHP ++ ++ D IK+WD +TL
Sbjct: 92 RLTPFEKFKLEGHRAG--------VNCVAFHPQYQILGSASDDGSIKLWDYESGHFEKTL 143
Query: 189 PGHAKTLDFSRKD-SGDFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSG 247
GH ++ D +G + S + + + +K + K IGH VS
Sbjct: 144 KGHTSNVNCLAFDPTGKYICSASSDLSIKLWELKNHTCVKTL---------IGHEHSVST 194
Query: 248 ILIPGSGE 255
+ G+
Sbjct: 195 VQFSDHGD 202
>sp|O75529|TAF5L_HUMAN TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1
SV=1
Length = 589
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 18/99 (18%)
Query: 122 LGRTDVIRVNPFNGVVSLGHSGGTMLC--------------HQGPVSALAFHPNGHLMAT 167
L D ++ +P + ++ G + T+ H+GPV +LAF PNG +A+
Sbjct: 426 LADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLAS 485
Query: 168 SGKDCKIKIWDLRKYEVLQTLPGHA---KTLDFSRKDSG 203
+G+D ++K+WDL + + L GH +L FS DSG
Sbjct: 486 AGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS-PDSG 523
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH 191
H V + FHPN + +AT D +++W ++ ++ GH
Sbjct: 425 HLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGH 467
>sp|Q229Z6|POC1_TETTS POC1 centriolar protein homolog OS=Tetrahymena thermophila (strain
SB210) GN=TTHERM_01308010 PE=3 SV=1
Length = 634
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 5/60 (8%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAK---TLDFSRKDSGDF 205
H V++++ HP G+ +A++G D KIKIWDLR+ + TL + K T+ F++ SGD+
Sbjct: 271 HDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDITTVQFNQ--SGDY 328
Score = 39.3 bits (90), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH 191
H VS + FHP+G + +S D KIKI D+R +++Q H
Sbjct: 229 HMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQHYNAH 271
>sp|Q9UTC7|YIDC_SCHPO Uncharacterized WD repeat-containing protein C227.12
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC227.12 PE=4 SV=1
Length = 462
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL-DFSRKDSGDFSG 207
H + A+A+ PNG+ +ATS D +KIWDLRK + T+P H+ + D +SG
Sbjct: 348 HIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESG---- 403
Query: 208 SHNYNRYMGYSMVKG 222
NR++ S G
Sbjct: 404 ---VNRFIATSGYDG 415
Score = 37.0 bits (84), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 141 HSGGTMLCHQGP---VSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL 195
H+G +L +G + ++A P+G L+++ G D +IWDLR + + L H + +
Sbjct: 295 HTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQI 352
>sp|B8PD53|LIS12_POSPM Nuclear distribution protein PAC1-2 OS=Postia placenta (strain ATCC
44394 / Madison 698-R) GN=PAC1-2 PE=3 SV=1
Length = 427
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 16/110 (14%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKT---LDFSRKD 201
T+ H+ P++ +AFHP L+A++ +D +KIWD +TL GH + +DF K
Sbjct: 103 TLTSHRAPITRVAFHPTFSLLASASEDTTVKIWDWETGSFERTLKGHTREVWGVDFDSKG 162
Query: 202 SGDFSGSHNYNRYM---------GYS--MVKGYQ--IGKVSFRPYEDVLG 238
S + S + + + GYS ++G++ + V F P +D++
Sbjct: 163 SFLATCSSDLSIKVWDTQQWDNAGYSGKTLRGHEHTVSTVKFLPGDDLIA 212
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 140 GHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH 191
G+SG T+ H+ VS + F P L+A++ +D I+IW++ ++T+ GH
Sbjct: 186 GYSGKTLRGHEHTVSTVKFLPGDDLIASASRDKTIRIWEVATTFCIRTITGH 237
>sp|A8NEG8|LIS1_COPC7 Nuclear distribution protein PAC1 OS=Coprinopsis cinerea (strain
Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=PAC1
PE=3 SV=3
Length = 434
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAK---TLDFSRK 200
H+ P++++AFHP ++A++ +D +KIWD E +TL GH K LDF K
Sbjct: 107 HRAPLTSIAFHPQYSILASASEDTTVKIWDWETGEFERTLKGHTKPVNDLDFDHK 161
Score = 38.5 bits (88), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLR-KYEVLQTLPGHAKTLDFSRKDSG 203
T+ H PV+ L F GHL+ T D IKIWD + +++ +T GH + R G
Sbjct: 145 TLKGHTKPVNDLDFDHKGHLLVTCSSDLFIKIWDSQNEWKNTKTFVGHDHAVSAVRFMPG 204
Query: 204 D 204
D
Sbjct: 205 D 205
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHA---KTLDFSRKDSG 203
H V ALAFHP+G + +S D +++W+L L+ + H+ L + R+ +G
Sbjct: 338 HDNWVRALAFHPSGKYLLSSSDDKTVRVWELSTGRCLRIVEAHSHFVAALAWGRQAAG 395
Score = 36.2 bits (82), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAK 193
T + H VSA+ F P L+ ++ +D I+++D+ ++TL GH++
Sbjct: 188 TFVGHDHAVSAVRFMPGDQLIVSASRDRTIRVFDVASTHQVRTLSGHSE 236
>sp|Q6NVM2|KTNB1_XENTR Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus tropicalis
GN=katnb1 PE=2 SV=1
Length = 655
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVL-----QTLPGHAKTLDFSRKDSG 203
H+GPV+ + FHPN +L+A+ D ++ WDL K++++ +T+P + + FS
Sbjct: 188 HKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLIGCTEGETIP--VRAILFSSDGGC 245
Query: 204 DFSGSHNYNRYMGY 217
F G + R G+
Sbjct: 246 IFCGGRDALRVYGW 259
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH---AKTLDFSRKD 201
T++ H+ V +L FHP G +A+ D IK+WD+R+ + GH + L FS
Sbjct: 100 TLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDG 159
Query: 202 SGDFSGSHNYNRYMGYSMVKGYQIGKVS----------FRPYEDVLGIGHS 242
S S +++ + + + G + ++S F P E +L G +
Sbjct: 160 KWLASASDDHSVKL-WDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSA 209
Score = 39.7 bits (91), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 13/108 (12%)
Query: 146 MLCHQGPVSALAF-HPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSRKD--- 201
++ H VS++ +G L+AT G DC++ +W + K + +L GH ++ R +
Sbjct: 16 IVAHGSSVSSVVLGKSSGRLVATGGDDCRVNLWSVNKPNCIMSLTGHTTPVESVRFNNAE 75
Query: 202 ----SGDFSGSHNY-----NRYMGYSMVKGYQIGKVSFRPYEDVLGIG 240
+G SGS + + M + + F PY D + G
Sbjct: 76 ELIVAGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDFHPYGDFVASG 123
Score = 39.3 bits (90), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 14/94 (14%)
Query: 124 RTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYE 183
R ++ VN N ++SL H PV ++ F+ L+ + +++WDL +
Sbjct: 44 RVNLWSVNKPNCIMSLTG-------HTTPVESVRFNNAEELIVAGSQSGSLRVWDLEAAK 96
Query: 184 VLQTLPGH---AKTLDFSRKDSGDF--SGSHNYN 212
+L+TL GH +LDF GDF SGS + N
Sbjct: 97 ILRTLMGHKANVCSLDF--HPYGDFVASGSLDTN 128
>sp|B8P4B0|LIS11_POSPM Nuclear distribution protein PAC1-1 OS=Postia placenta (strain ATCC
44394 / Madison 698-R) GN=PAC1-1 PE=3 SV=1
Length = 438
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 16/110 (14%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKT---LDFSRKD 201
T+ H+ P++ +AFHP L+A++ +D +KIWD +TL GH + +DF K
Sbjct: 103 TLTSHRAPITRVAFHPTFSLLASASEDTTVKIWDWETGSFERTLKGHTREVWGVDFDSKG 162
Query: 202 SGDFSGSHNYNRYM---------GYS--MVKGYQ--IGKVSFRPYEDVLG 238
S + S + + + GYS ++G++ + V F P +D++
Sbjct: 163 SFLATCSSDLSIKVWDTQQWDNAGYSGKTLRGHEHTVSTVKFLPGDDLIA 212
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 140 GHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH 191
G+SG T+ H+ VS + F P L+A++ +D I+IW++ ++ + GH
Sbjct: 186 GYSGKTLRGHEHTVSTVKFLPGDDLIASASRDKTIRIWEVATTFCIRMITGH 237
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 141 HSGG---TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHA 192
HSG T+ H + L FHP+G + ++ D I++W+L ++ + H+
Sbjct: 329 HSGQELRTLSGHNDWIRGLVFHPSGKHLLSASDDKTIRVWELSTGRCMKVVEAHS 383
>sp|Q91WQ5|TAF5L_MOUSE TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2
SV=1
Length = 589
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 122 LGRTDVIRVNPFNGVVSLGHSGGTMLC--------------HQGPVSALAFHPNGHLMAT 167
L D ++ +P + ++ G + T+ H+GPV +L+F PNG +A+
Sbjct: 426 LADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLAS 485
Query: 168 SGKDCKIKIWDLRKYEVLQTLPGHAKTL 195
+G+D ++K+WDL + + L GH ++
Sbjct: 486 AGEDQRLKLWDLASGTLFKELRGHTDSI 513
Score = 35.8 bits (81), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 22/32 (68%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLR 180
H +++LAF P+ L+A++ D +++WD+R
Sbjct: 509 HTDSITSLAFSPDSGLIASASMDNSVRVWDIR 540
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH 191
H V + FHPN + +AT D +++W ++ ++ GH
Sbjct: 425 HLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGH 467
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 96/239 (40%), Gaps = 44/239 (18%)
Query: 6 EGGYLEAEGVEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGC 65
+G L + +KT ++ + A + V L N + ++F+S G+ +A+A
Sbjct: 1250 DGKTLASASADKTIKLWRIADGKLVKTLKGHND--------SVWDVNFSSDGKAIASASR 1301
Query: 66 KGYPYFYNRDGTELHCSKEH-GEVLKLQFLLASINKLGQLRYQNVTMGEIVGNFWTGLGR 124
+NR G EL H G V + FL S N + N W
Sbjct: 1302 DNTIKLWNRHGIELETFTGHSGGVYAVNFLPDS-NIIASASLDNTI------RLW----- 1349
Query: 125 TDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEV 184
++P V G+SG V A++F +G ++AT+G D I++W + +
Sbjct: 1350 -QRPLISPLE--VLAGNSG---------VYAVSFLHDGSIIATAGADGNIQLWHSQDGSL 1397
Query: 185 LQTLPGHAKTLDFSRKDSGDFSGSHNYNRYMGYSMVK-----------GYQIGKVSFRP 232
L+TLPG+ S GD S N ++ + V+ ++ KV+F P
Sbjct: 1398 LKTLPGNKAIYGISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSP 1456
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 49 YTLDFTSSGRYMAAAGC-KGYPYFYNRDGTELHCSKEHGEVLKLQFL------LASINKL 101
Y++ F+ G+ +A+ G K + DGT L H + + + LAS +
Sbjct: 1117 YSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSD 1176
Query: 102 GQLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLC------------- 148
++ + T G+++ +R +P ++ G T+
Sbjct: 1177 HSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLN 1236
Query: 149 -HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKT---LDFSRKDSGD 204
HQ V++L+F P+G +A++ D IK+W + ++++TL GH + ++FS
Sbjct: 1237 GHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAI 1296
Query: 205 FSGSHN-----YNRY-MGYSMVKGYQIG--KVSFRPYEDVLG 238
S S + +NR+ + G+ G V+F P +++
Sbjct: 1297 ASASRDNTIKLWNRHGIELETFTGHSGGVYAVNFLPDSNIIA 1338
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 86/206 (41%), Gaps = 29/206 (14%)
Query: 6 EGGYLEAEGVEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGC 65
+ + + ++ T R+ Q + +++L+ + G Y + F G +A AG
Sbjct: 1333 DSNIIASASLDNTIRLWQRPLISPLEVLAGNS---------GVYAVSFLHDGSIIATAGA 1383
Query: 66 KG-YPYFYNRDGTELHCSKEHGEVLKLQF-----LLASINKLGQLRYQNVTMGEIVGNFW 119
G ++++DG+ L + + + F L+AS N ++ V G+ +
Sbjct: 1384 DGNIQLWHSQDGSLLKTLPGNKAIYGISFTPQGDLIASANADKTVKIWRVRDGKALKTLI 1443
Query: 120 TGLGRTDVIRVNPF----------NGV----VSLGHSGGTMLCHQGPVSALAFHPNGHLM 165
+ + +P N V VS G T+ H V ++F P+G ++
Sbjct: 1444 GHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKII 1503
Query: 166 ATSGKDCKIKIWDLRKYEVLQTLPGH 191
A++ D I++WD ++++LP H
Sbjct: 1504 ASASADKTIRLWDSFSGNLIKSLPAH 1529
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLD 196
T+ H+ V +++F P+G +A+ G D IK+W +L+T+ GH +T++
Sbjct: 1108 TLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVN 1159
Score = 40.0 bits (92), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 21/168 (12%)
Query: 49 YTLDFTSSGRYMAAAGC-KGYPYFYNRDGTELHCSKEH-GEVLKLQF-----LLASINKL 101
Y + FT G +A+A K + RDG L H EV K+ F LAS ++
Sbjct: 1408 YGISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRD 1467
Query: 102 GQLRYQNVTMGEIVGN--------FWTGLG-RTDVIRVNPFNGVVSLGHS-GGTML---- 147
++ NV+ G+ FW +I + + L S G ++
Sbjct: 1468 NTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGNLIKSLP 1527
Query: 148 CHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL 195
H V ++ F+P+G ++A++ D +K+W +L T GH+ +
Sbjct: 1528 AHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNVV 1575
Score = 35.4 bits (80), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 140 GHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH 191
GH T H V + +F P+G +A++ +D +KIW + + +L TLP H
Sbjct: 1562 GHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKIWQIDGH-LLTTLPQH 1612
>sp|Q8TC44|POC1B_HUMAN POC1 centriolar protein homolog B OS=Homo sapiens GN=POC1B PE=1
SV=1
Length = 478
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 24/174 (13%)
Query: 50 TLDFTSSGRYMAAAG----CKGYPYFYNRDGTELHCSKEHGEVLKLQ---FLLASINKLG 102
++DF++ G+++A A K + + R L+ K L+ S ++
Sbjct: 107 SVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 166
Query: 103 QLRYQNVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTM--------------LC 148
++ + T + V NF +G + + NP ++ S T+
Sbjct: 167 TIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQV 226
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAK---TLDFSR 199
H G V+ ++FHP+G+ + T+ D +KI DL + ++ TL GH T+ FS+
Sbjct: 227 HSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSK 280
Score = 35.8 bits (81), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHA 192
H PV ++ F +G +AT+ +D IK+W + + L +L H
Sbjct: 101 HTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHT 144
Score = 32.3 bits (72), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIW--DLR-KYEVLQTLPGHAKTLDFS 198
H+ V+++ F P+G+L+A++ +D +++W D R K+ + +++DFS
Sbjct: 59 HKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFS 111
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH---AKTLDFSRKDSGDF 205
H V+ + FHPN +L+A+ D +K+WDL K+ ++ + G +++ F+ S +
Sbjct: 188 HTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLY 247
Query: 206 SGSHNYNRYMGYSMVKGYQIGKVSFRPYEDV 236
SGS N R G+ + + + V + D+
Sbjct: 248 SGSENTLRVYGWEPDRCFDVVHVGWGKVSDL 278
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH---AKTLDFSRKD 201
T++ H+ +S+L FHP G +A+ D IK+WD+R+ + GH + L FS D
Sbjct: 100 TLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFS-PD 158
Query: 202 SGDFSGSHNYNRYMGYSMVKGYQIGK----------VSFRPYEDVLGIGHS 242
+ + + + + ++ G I + V F P E +L G +
Sbjct: 159 GKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSA 209
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 146 MLCHQGPVSALAF-HPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAK---TLDFS--- 198
++ H VS+L +G L+AT G+DC++ IW + K + +L GH + F+
Sbjct: 16 IVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSE 75
Query: 199 -RKDSGDFSGS 208
R +G SGS
Sbjct: 76 ERVVAGSLSGS 86
>sp|Q8K450|SPG16_MOUSE Sperm-associated antigen 16 protein OS=Mus musculus GN=Spag16 PE=1
SV=1
Length = 639
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 16/103 (15%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL-DFSRKDSGDFSG 207
H +S FHP+G +ATS D IK+WDL K E TL GH + + GDF
Sbjct: 401 HTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVA 460
Query: 208 SHNYN-------------RYMGYSMVKGYQIGKVSFRPYEDVL 237
S + + RY Y + + F P+ ++L
Sbjct: 461 SASLDMTSKIWDVNSERCRYTLYGHTDS--VNSIEFFPFSNIL 501
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 29/52 (55%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLD 196
T+ H V+++ F P +++ T+ D + +WD R + Q+L GH +++
Sbjct: 481 TLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVN 532
>sp|P53622|COPA_YEAST Coatomer subunit alpha OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=COP1 PE=1 SV=2
Length = 1201
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 128 IRVNPFNGVVSL-GHSGGTMLC----HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKY 182
+ V F+ + L + GT+L H+GPV L FHP + ++G D IK+W L
Sbjct: 26 VLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFHPTQPIFVSAGDDYTIKVWSLDTN 85
Query: 183 EVLQTLPGHAKTLDFSR 199
+ L TL GH LD+ R
Sbjct: 86 KCLYTLTGH---LDYVR 99
Score = 35.0 bits (79), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRK 181
H V ++ FHP+ +L+ + G+D +++WDL K
Sbjct: 252 HTNNVDSVIFHPHQNLIISVGEDKTLRVWDLDK 284
>sp|B4JWA1|LIS1_DROGR Lissencephaly-1 homolog OS=Drosophila grimshawi GN=Lis-1 PE=3 SV=1
Length = 411
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 116 GNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIK 175
G F R IR+ VS+G T+ H V LAFHP G + ++ D I+
Sbjct: 309 GPFLASGSRDKTIRIWD----VSVGQCLLTLNGHDNWVRGLAFHPGGKYLVSASDDKTIR 364
Query: 176 IWDLRKYEVLQTLPGH---AKTLDFSRKDSGDFSGS 208
+WDLR ++TL H ++DF + SGS
Sbjct: 365 VWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGS 400
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL 195
H+ ++ + FHP LM ++ +D IKIWD E +TL GH ++
Sbjct: 107 HRASITRVIFHPIFGLMVSASEDATIKIWDFETGEYERTLKGHTDSV 153
Score = 40.0 bits (92), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRK-YEVLQTLPGHAKTL-DFSRKDS 202
T+ H V +AF G L+ + D IK+WD ++ YE ++T+ GH + + +
Sbjct: 145 TLKGHTDSVQDVAFDAQGKLLVSCSADLSIKLWDFQQSYECVKTMHGHDHNVSSVAFVPA 204
Query: 203 GDFSGSHNYNRYMG-YSMVKGYQIGKVS-FRPYEDVLGIGHSMGVSGILIPGSGEPNFDS 260
GD+ S + +R + + + GY + + R + ++ + H G I S +
Sbjct: 205 GDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRV-HIEG--SIFATCSNDHTIRV 261
Query: 261 WVANPFETSKQRREKE 276
W+ N + + R+ E
Sbjct: 262 WLTNSKDCKVELRDHE 277
>sp|O22212|PRP4L_ARATH U4/U6 small nuclear ribonucleoprotein PRP4-like protein
OS=Arabidopsis thaliana GN=EMB2776 PE=2 SV=1
Length = 554
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 142 SGGTMLCHQG---PVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHA 192
+G ++L QG PV ++ F PNG+ +A+ G+D + +IWDLR + L +P HA
Sbjct: 412 TGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHA 465
Score = 38.1 bits (87), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 148 CHQGPVSALAFHPN-GHLMATSGKDCKIKIWDLRKYEVLQTLPGH---AKTLDFSRKDSG 203
H VS + + P G+ +AT+ D K+ IW R + ++++L GH +LD + S
Sbjct: 463 AHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSC 522
Query: 204 DFSGSHN 210
+ SH+
Sbjct: 523 IATVSHD 529
Score = 36.6 bits (83), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 141 HSGGTMLCHQG---PVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAK---T 194
++G +L +G V +AF +G L A+ G D ++WDLR + GH K +
Sbjct: 369 NTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFS 428
Query: 195 LDFS 198
++FS
Sbjct: 429 VNFS 432
Score = 36.2 bits (82), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 61/149 (40%), Gaps = 15/149 (10%)
Query: 51 LDFTSSGRYMAAAGCKGYPYFYNRDGTELHCSKEHGEVLKLQFLLASINKLGQLRYQNVT 110
LD ++ G GC ++RDG L G V KL + N + L+
Sbjct: 247 LDCSNFGDDRPLTGCS-----FSRDGKILATCSLSG-VTKLWEMPQVTNTIAVLKDHKER 300
Query: 111 MGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTML----CHQGPVSALAFHPNGHLMA 166
++V + D + + L + GT+L H ++ +AFHP+G +
Sbjct: 301 ATDVVFS-----PVDDCLATASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLG 355
Query: 167 TSGKDCKIKIWDLRKYEVLQTLPGHAKTL 195
T+ D ++WD+ L GH++++
Sbjct: 356 TTSYDKTWRLWDINTGAELLLQEGHSRSV 384
>sp|B4LQ21|LIS1_DROVI Lissencephaly-1 homolog OS=Drosophila virilis GN=Lis-1 PE=3 SV=1
Length = 411
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 116 GNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIK 175
G F R IR+ VS+G T+ H V LAFHP G + ++ D I+
Sbjct: 309 GPFLASGSRDKTIRIWD----VSVGQCLLTLNGHDNWVRGLAFHPGGKYLVSASDDKTIR 364
Query: 176 IWDLRKYEVLQTLPGH---AKTLDFSRKDSGDFSGS 208
+WDLR ++TL H ++DF + SGS
Sbjct: 365 VWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGS 400
Score = 41.2 bits (95), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRK-YEVLQTLPGHAKTL-DFSRKDSGDFS 206
H V +AF G L+A+ D IK+WD ++ YE ++T+ GH + + +GD+
Sbjct: 149 HTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECVKTMHGHDHNVSSVAFVPAGDYV 208
Query: 207 GSHNYNRYMG-YSMVKGYQIGKVS-FRPYEDVLGIGHSMGVSGILIPGSGEPNFDSWVAN 264
S + +R + + + GY + + R + ++ + H G I S + W+ N
Sbjct: 209 LSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRV-HIEG--SIFATCSNDHTIRVWLTN 265
Query: 265 PFETSKQRREKE 276
+ + R+ E
Sbjct: 266 SKDCKVELRDHE 277
Score = 39.7 bits (91), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL 195
H+ ++ + FHP LM ++ +D IKIWD E ++L GH ++
Sbjct: 107 HRASITRVIFHPIFGLMVSASEDATIKIWDFETGEYERSLKGHTDSV 153
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSR 199
TM H VS++AF P G + ++ +D IK+W++ ++T GH + + R
Sbjct: 188 TMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVR 242
>sp|A7S338|LIS1_NEMVE Lissencephaly-1 homolog OS=Nematostella vectensis GN=v1g242515 PE=3
SV=1
Length = 409
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL-DFSRKDSG 203
T+ H+ P++ + FHP +M TS +D +K+WD + +TL GH + D + +G
Sbjct: 101 TLTGHRSPITKVLFHPVYSVMVTSSEDATVKVWDYETGDFERTLKGHTDAVQDLAFDHTG 160
Query: 204 DFSGSHNYNR------YMGYSMVK-----GYQIGKVSFRPYEDVL 237
F S + + + G+ ++ + + +SF P D L
Sbjct: 161 KFLASSSADMTIKLWDFQGFECIRTLHGHDHNVSSISFLPSGDHL 205
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 137 VSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH---AK 193
VS G T++ H V A+ FHP G + + D ++IWD + +TL H
Sbjct: 324 VSAGVCLVTLVGHDNWVRAVMFHPGGKFIVSCSDDKTLRIWDYKNKRCAKTLVAHEHFVT 383
Query: 194 TLDFSR 199
TLDF +
Sbjct: 384 TLDFHK 389
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSRKDS-G 203
T+ H VS+++F P+G + ++ +D IK+W++ ++T GH + + R ++ G
Sbjct: 185 TLHGHDHNVSSISFLPSGDHLVSASRDKTIKMWEIATGYCVKTFQGHGEWVRRVRPNADG 244
Query: 204 DFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVL 237
S + ++ + +V + K R ++ V+
Sbjct: 245 SLIASCSNDQTIRVWVVASREC-KCDLRDHDHVI 277
>sp|B6QC56|LIS11_PENMQ Nuclear distribution protein nudF 1 OS=Penicillium marneffei
(strain ATCC 18224 / CBS 334.59 / QM 7333) GN=nudF-1
PE=3 SV=1
Length = 459
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 20/112 (17%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKT---LDFSRKDSGDF 205
H+ ++ LAFHP +A+ DC IKIWD E+ TL GH + +D+ SG
Sbjct: 115 HRNTINCLAFHPKFSSIASGSDDCMIKIWDWELGELETTLKGHTRAVLDVDYGNTQSGVL 174
Query: 206 SGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGI----GHSMGVSGI-LIPG 252
S + + + + P ED I GH VS + IPG
Sbjct: 175 LASCSSDLSIKI------------WNPLEDYKNIRTLLGHEHSVSAVRFIPG 214
Score = 38.9 bits (89), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 31/48 (64%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHA 192
T+L H+ VSA+ F P +L+ ++ +D ++IWD+ ++T+ GH+
Sbjct: 198 TLLGHEHSVSAVRFIPGRNLLTSASRDKDLRIWDVTTGFCVKTIQGHS 245
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRK 181
T++ H V A+ FHP G + ++ D I+ WDL +
Sbjct: 348 TLVGHDNWVRAIVFHPGGKYLLSASDDKSIRCWDLSQ 384
>sp|Q9JMJ4|PRP19_RAT Pre-mRNA-processing factor 19 OS=Rattus norvegicus GN=Prpf19 PE=2
SV=2
Length = 504
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL 188
H GP++++AF NG+ +AT+ D +K+WDLRK + +TL
Sbjct: 391 HSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTL 430
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Query: 142 SGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHA 192
SG ++ C Q FHP+G + T D +IKIWDL++ + PGH+
Sbjct: 349 SGCSLTCAQ-------FHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHS 392
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 144 GTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLD-FSRKDS 202
T+ H V+++ FHP+ L+ ++ D I+IW + +Q + H + S +
Sbjct: 258 ATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHAT 317
Query: 203 GDFSGSHNYNRYMGYSMVKGYQIGKV 228
GD+ S + ++Y +S + Q G+V
Sbjct: 318 GDYLLSSSDDQYWAFSDI---QTGRV 340
>sp|Q99KP6|PRP19_MOUSE Pre-mRNA-processing factor 19 OS=Mus musculus GN=Prpf19 PE=2 SV=1
Length = 504
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL 188
H GP++++AF NG+ +AT+ D +K+WDLRK + +TL
Sbjct: 391 HSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTL 430
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Query: 142 SGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHA 192
SG ++ C Q FHP+G + T D +IKIWDL++ + PGH+
Sbjct: 349 SGCSLTCAQ-------FHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHS 392
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 144 GTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLD-FSRKDS 202
T+ H V+++ FHP+ L+ ++ D I+IW + +Q + H + S +
Sbjct: 258 ATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHAT 317
Query: 203 GDFSGSHNYNRYMGYSMVKGYQIGKV 228
GD+ S + ++Y +S + Q G+V
Sbjct: 318 GDYLLSSSDDQYWAFSDI---QTGRV 340
>sp|Q08E38|PRP19_BOVIN Pre-mRNA-processing factor 19 OS=Bos taurus GN=PRPF19 PE=2 SV=1
Length = 504
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL 188
H GP++++AF NG+ +AT+ D +K+WDLRK + +TL
Sbjct: 391 HSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTL 430
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Query: 142 SGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHA 192
SG ++ C Q FHP+G + T D +IKIWDL++ + PGH+
Sbjct: 349 SGCSLTCAQ-------FHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHS 392
Score = 41.2 bits (95), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 144 GTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLD-FSRKDS 202
T+ H V+++ FHP+ L+ ++ D I+IW + +Q + H + S +
Sbjct: 258 ATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHAT 317
Query: 203 GDFSGSHNYNRYMGYSMVKGYQIGKV 228
GD+ S + ++Y +S + Q G+V
Sbjct: 318 GDYLLSSSDDQYWAFSDI---QTGRV 340
>sp|B5X3C4|LIS1B_SALSA Lissencephaly-1 homolog B OS=Salmo salar GN=pafah1b1-2 PE=2 SV=1
Length = 410
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 10/108 (9%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL-DFSRKDSGDFSG 207
H+ PV+ + FHP +M TS +D IK+WD + +TL GH ++ D S +G
Sbjct: 107 HRSPVTRVIFHPVFSVMVTSSEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLA 166
Query: 208 SHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIPGSGE 255
S + + + +G++ + GH VS + I +G+
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMH---------GHDHNVSSVAIMPNGD 205
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL-DFSRKDSGDFSG 207
H V ++F G L+A+ D IK+WD + +E ++T+ GH + + +GD
Sbjct: 149 HTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV 208
Query: 208 SHNYNRYMG-YSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIPGSGEPNFDSWVANPF 266
S + ++ + + + GY + +F + + + + ++ S + WVA
Sbjct: 209 SASRDKTIKMWEVATGYCVK--TFTGHREWVRMVRPNQDGSLIASCSNDQTVRVWVATSK 266
Query: 267 ETSKQRREKE 276
E + RE E
Sbjct: 267 ECKAELREHE 276
Score = 37.0 bits (84), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 137 VSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH 191
+S G T++ H V + HP G + + D ++IWD + ++TL H
Sbjct: 325 ISTGMCLMTLVGHDNWVRGVLVHPGGRFIVSCADDKTLRIWDYKNKRCMKTLCAH 379
>sp|Q9UMS4|PRP19_HUMAN Pre-mRNA-processing factor 19 OS=Homo sapiens GN=PRPF19 PE=1 SV=1
Length = 504
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL 188
H GP++++AF NG+ +AT+ D +K+WDLRK + +TL
Sbjct: 391 HSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTL 430
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Query: 142 SGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHA 192
SG ++ C Q FHP+G + T D +IKIWDL++ + PGH+
Sbjct: 349 SGCSLTCAQ-------FHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHS 392
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 144 GTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLD-FSRKDS 202
T+ H V+++ FHP+ L+ ++ D I+IW + +Q + H + S +
Sbjct: 258 ATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHAT 317
Query: 203 GDFSGSHNYNRYMGYSMVKGYQIGKV 228
GD+ S + ++Y +S + Q G+V
Sbjct: 318 GDYLLSSSDDQYWAFSDI---QTGRV 340
>sp|Q5ZMA2|PRP19_CHICK Pre-mRNA-processing factor 19 OS=Gallus gallus GN=PRPF19 PE=1 SV=1
Length = 505
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL 188
H GP++++AF NG+ +AT+ D +K+WDLRK + +TL
Sbjct: 392 HSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTL 431
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Query: 142 SGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHA 192
SG + C Q FHP+G + T D +IKIWDL++ + PGH+
Sbjct: 350 SGCALTCAQ-------FHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHS 393
Score = 40.8 bits (94), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 144 GTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLD-FSRKDS 202
T+ H V+++ FHP+ L+ ++ D I+IW + +Q + H ++ S +
Sbjct: 259 ATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHEGSVTGLSLHAT 318
Query: 203 GDFSGSHNYNRYMGYSMVKGYQIGKV 228
GD+ S + ++Y +S + Q G+V
Sbjct: 319 GDYLLSSSDDQYWAFSDI---QTGRV 341
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 87/221 (39%), Gaps = 50/221 (22%)
Query: 6 EGGYLEAEGVEKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSGRYMAAAGC 65
+G L + + T R+ A A E + Y + + F+ G +A+
Sbjct: 512 DGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVL--------DIAFSPDGSMVASGSR 563
Query: 66 KGYPYFYN-RDGTELHCSKEHGE-VLKLQF-----LLASINKLGQLRYQNVTMGEIVGNF 118
G +N GTE K H + V + F ++AS ++ G +R +V G+
Sbjct: 564 DGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGK----- 618
Query: 119 WTGLGRTDVIRVNPFNGVVSLGHS-GGTMLCHQGP-----------------------VS 154
DV++ P VVSL S G+ML H V
Sbjct: 619 -----ERDVLQA-PAENVVSLAFSPDGSMLVHGSDSTVHLWDVASGEALHTFEGHTDWVR 672
Query: 155 ALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL 195
A+AF P+G L+A+ D I++WD+ E TL GH + +
Sbjct: 673 AVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPV 713
Score = 40.8 bits (94), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 137 VSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAK-TL 195
V+ G T+ H V A+AF P+G L+A+ D +++WD+ E GH L
Sbjct: 488 VASGDELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVL 547
Query: 196 D--FSRKDSGDFSGSHN-----YNRYMG--YSMVKGYQ--IGKVSFRP 232
D FS S SGS + +N G ++++KG+ + V+F P
Sbjct: 548 DIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSP 595
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 108 NVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGG-----------------TMLCHQ 150
+V GE + F G TD +R F+ +L SG T+ H
Sbjct: 654 DVASGEALHTF---EGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHT 710
Query: 151 GPVSALAFHPNGHLMATSGKDCKIKIWDL 179
PV ++AFHP G +A++ +D I+IW +
Sbjct: 711 EPVHSVAFHPEGTTLASASEDGTIRIWPI 739
>sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus
GN=KATNB1 PE=2 SV=2
Length = 657
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHA---KTLDFSRKDSGDF 205
H GPV+ + FHP+ +L+A+ D I+ WDL K+ V+ + A + + F+ +
Sbjct: 188 HSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLY 247
Query: 206 SGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHS--MGVS 246
G + R G+ + + + V++ D L + H+ +GVS
Sbjct: 248 GGFQDSLRVYGWEPERCFDVVVVNWGKVAD-LSVCHNQLIGVS 289
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 146 MLCHQGPVSALAF-HPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHA---KTLDFSRKD 201
++ H VS+L G L+AT G DC++ +W + K + +L GH ++L S K+
Sbjct: 16 IVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKE 75
Query: 202 SGDFSGSHN 210
+GS +
Sbjct: 76 ELIVAGSQS 84
Score = 40.0 bits (92), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRK 181
T+L H+ + +L FHP G +A+ D IK+WD+R+
Sbjct: 100 TLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRR 136
Score = 39.3 bits (90), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 18/125 (14%)
Query: 90 KLQFLLASINKLGQLRYQNVTMGEIVGNFWTGLG---RTDVIRVNPFNGVVSLGHSGGTM 146
KLQ ++A + + L +G+ G G R +V VN N V+SL
Sbjct: 12 KLQEIVAHSSNVSSL-----VLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTG----- 61
Query: 147 LCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAK---TLDFSRKDSG 203
H P+ +L L+ + I++WDL ++L+TL GH +LDF S
Sbjct: 62 --HTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSF 119
Query: 204 DFSGS 208
SGS
Sbjct: 120 VASGS 124
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 63/159 (39%), Gaps = 21/159 (13%)
Query: 55 SSGRYMAAAG--CKGYPYFYNRDGTELHCSKEHGEVLKLQF-----LLASINKLGQLRYQ 107
S+GR +A G C+ + N+ + + + LQ L+ + ++ G +R
Sbjct: 31 STGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVW 90
Query: 108 NVTMGEIVGNFWTGLGRTDVIRVNPFNGVVSLG-----------HSGGTML---CHQGPV 153
++ +I+ + +P+ V+ G G + H V
Sbjct: 91 DLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAV 150
Query: 154 SALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHA 192
L F P+G +A++ D +K+WDL +V+ GH+
Sbjct: 151 RCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHS 189
>sp|Q6NZH4|LIS1_XENTR Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 10/108 (9%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL-DFSRKDSGDFSG 207
H+ PV+ + FHP +M T+ +D IK+WD + +TL GH ++ D S SG
Sbjct: 107 HRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 208 SHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIPGSGE 255
S + + + +G++ + GH VS + I +G+
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMH---------GHDHNVSSVAIMPNGD 205
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 137 VSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH---AK 193
+S+G T++ H V + FHP G + + D I+IWD + ++TL H
Sbjct: 325 ISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVT 384
Query: 194 TLDFSRKDSGDFSGS 208
+LDF + +GS
Sbjct: 385 SLDFHKTAPYVVTGS 399
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 70/175 (40%), Gaps = 23/175 (13%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL-DFSRKDSG 203
T+ H V ++F +G L+A+ D IK+WD + +E ++T+ GH + + +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 204 DFSGSHNYNRYMG-YSMVKGYQIGKVS--------FRPYEDVLGIGHSMGVSGILIPG-S 253
D S + ++ + + + GY + + RP +D G LI S
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-----------GTLIASCS 253
Query: 254 GEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETIMLNPSKIGTVREAKKKEKP 308
+ WV E + RE E PE+ S T E KK KP
Sbjct: 254 NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISD-ATGSETKKSGKP 307
>sp|B7FNU7|LIS1_PHATC Lissencephaly-1 homolog OS=Phaeodactylum tricornutum (strain CCAP
1055/1) GN=PHATRDRAFT_17300 PE=3 SV=1
Length = 439
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 14/83 (16%)
Query: 127 VIRVNPFNGVVSLGHSGG--------------TMLCHQGPVSALAFHPNGHLMATSGKDC 172
+RV+P VV G G T+ H V+ LAF P G +A+ D
Sbjct: 134 CVRVHPVFTVVVSGSEDGSVKVWDHESGEYIRTLKGHTNTVNGLAFTPTGSHLASCSTDL 193
Query: 173 KIKIWDLRKYEVLQTLPGHAKTL 195
IK+WD + Y ++TL GH T+
Sbjct: 194 SIKLWDFQTYACIKTLRGHDHTI 216
Score = 35.8 bits (81), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 12/101 (11%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKT---LDFSRKD 201
T+ H V+ + HP ++ + +D +K+WD E ++TL GH T L F+
Sbjct: 124 TLQGHSSVVTCVRVHPVFTVVVSGSEDGSVKVWDHESGEYIRTLKGHTNTVNGLAFTPTG 183
Query: 202 SGDFSGSHNYN----RYMGYSMVK-----GYQIGKVSFRPY 233
S S S + + + Y+ +K + I V F P+
Sbjct: 184 SHLASCSTDLSIKLWDFQTYACIKTLRGHDHTISSVVFLPF 224
Score = 32.7 bits (73), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL 188
H V ++ HPNG+ + +S D I+++D++ L+TL
Sbjct: 365 HDNWVRSVLIHPNGNYILSSSDDKSIRVFDIKNERCLRTL 404
>sp|Q54S59|WDR61_DICDI WD repeat-containing protein 61 homolog OS=Dictyostelium discoideum
GN=wdr61 PE=4 SV=1
Length = 299
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 90/217 (41%), Gaps = 33/217 (15%)
Query: 1 WLMPSEGGYLEAEGV---EKTWRIKQEAIAREVDILSSRNQYDIMLPELGPYTLDFTSSG 57
W + +G + G+ KTW Q L+ R +D + LG +LD
Sbjct: 17 WCVKWQGDIIATGGMGTKVKTWHGNQP------QFLTERKVFDKHI--LGVTSLDIDIGA 68
Query: 58 RYMAAAGCKGYPYFYNRDGTELHCSKEHGEV--LKLQFL-----LASINKLGQLRYQNVT 110
RY+A G G ++ LH + + G + LK+ FL L S+++ G + +V
Sbjct: 69 RYLATGGMDGTVRLFDLSTNTLHKTIDSGPLGCLKIGFLNSANNLVSVSESGNISIYSVE 128
Query: 111 MGEIVGNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLC--------------HQGPVSAL 156
GE + + + + ++P N +++ GT+LC H P+ +L
Sbjct: 129 TGEKLRSISNTNKQVLTMAISPNNEQIAVAGLDGTVLCYDVESGRRVSEIKAHGVPIRSL 188
Query: 157 AFHPNGHLMATSGKDCKIKIWDLRKYE-VLQTLPGHA 192
F + + T +D +I++ D + +L GH+
Sbjct: 189 CFSSDSKTIFTGAEDSQIRLHDPNSSNPYIASLLGHS 225
>sp|B4QHG6|LIS1_DROSI Lissencephaly-1 homolog OS=Drosophila simulans GN=Lis-1 PE=3 SV=1
Length = 411
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 116 GNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIK 175
G F R IR+ VS+G T+ H V LAFHP G + ++ D I+
Sbjct: 309 GPFLASGSRDKTIRIWD----VSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIR 364
Query: 176 IWDLRKYEVLQTLPGH---AKTLDFSRKDSGDFSGS 208
+WDLR ++TL H ++DF + SGS
Sbjct: 365 VWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGS 400
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRK-YEVLQTLPGHAKTL-DFSRKDSGDFS 206
H V +AF G L+A+ D IK+WD ++ YE ++T+ GH + + +GD+
Sbjct: 149 HTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYV 208
Query: 207 GSHNYNRYMG-YSMVKGYQIGKVS-FRPYEDVLGIGHSMGVSGILIPGSGEPNFDSWVAN 264
S + +R + + + GY + + R + ++ + H G I S + W+ N
Sbjct: 209 LSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRV-HIEG--SIFATCSNDQTIRVWLTN 265
Query: 265 PFETSKQRREKE 276
+ + R+ E
Sbjct: 266 SKDCKVELRDHE 277
Score = 39.7 bits (91), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL 195
H+ ++ + FHP LM ++ +D I+IWD E ++L GH ++
Sbjct: 107 HRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSV 153
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSR 199
TM H VS++AF P G + ++ +D IK+W++ ++T GH + + R
Sbjct: 188 TMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVR 242
>sp|B4HSL3|LIS1_DROSE Lissencephaly-1 homolog OS=Drosophila sechellia GN=Lis-1 PE=3 SV=1
Length = 411
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 116 GNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIK 175
G F R IR+ VS+G T+ H V LAFHP G + ++ D I+
Sbjct: 309 GPFLASGSRDKTIRIWD----VSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIR 364
Query: 176 IWDLRKYEVLQTLPGH---AKTLDFSRKDSGDFSGS 208
+WDLR ++TL H ++DF + SGS
Sbjct: 365 VWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGS 400
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRK-YEVLQTLPGHAKTL-DFSRKDSGDFS 206
H V +AF G L+A+ D IK+WD ++ YE ++T+ GH + + +GD+
Sbjct: 149 HTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYV 208
Query: 207 GSHNYNRYMG-YSMVKGYQIGKVS-FRPYEDVLGIGHSMGVSGILIPGSGEPNFDSWVAN 264
S + +R + + + GY + + R + ++ + H G I S + W+ N
Sbjct: 209 LSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRV-HIEG--SIFATCSNDQTIRVWLTN 265
Query: 265 PFETSKQRREKE 276
+ + R+ E
Sbjct: 266 SKDCKVELRDHE 277
Score = 39.7 bits (91), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL 195
H+ ++ + FHP LM ++ +D I+IWD E ++L GH ++
Sbjct: 107 HRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSV 153
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSR 199
TM H VS++AF P G + ++ +D IK+W++ ++T GH + + R
Sbjct: 188 TMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVR 242
>sp|Q7KNS3|LIS1_DROME Lissencephaly-1 homolog OS=Drosophila melanogaster GN=Lis-1 PE=1
SV=2
Length = 411
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 116 GNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIK 175
G F R IR+ VS+G T+ H V LAFHP G + ++ D I+
Sbjct: 309 GPFLASGSRDKTIRIWD----VSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIR 364
Query: 176 IWDLRKYEVLQTLPGH---AKTLDFSRKDSGDFSGS 208
+WDLR ++TL H ++DF + SGS
Sbjct: 365 VWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGS 400
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRK-YEVLQTLPGHAKTL-DFSRKDSGDFS 206
H V +AF G L+A+ D IK+WD ++ YE ++T+ GH + + +GD+
Sbjct: 149 HTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYV 208
Query: 207 GSHNYNRYMG-YSMVKGYQIGKVS-FRPYEDVLGIGHSMGVSGILIPGSGEPNFDSWVAN 264
S + +R + + + GY + + R + ++ + H G I S + W+ N
Sbjct: 209 LSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRV-HIEG--SIFATCSNDQTIRVWLTN 265
Query: 265 PFETSKQRREKE 276
+ + R+ E
Sbjct: 266 SKDCKVELRDHE 277
Score = 39.7 bits (91), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL 195
H+ ++ + FHP LM ++ +D I+IWD E ++L GH ++
Sbjct: 107 HRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSV 153
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSR 199
TM H VS++AF P G + ++ +D IK+W++ ++T GH + + R
Sbjct: 188 TMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVR 242
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 137 VSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHA 192
+S G +L H V A+ FHP G ++AT DC +K+W++ + L+TL H+
Sbjct: 1007 ISTGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHS 1062
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHA 192
T+ H+ V ++AFHP+G +A++ D IK+WD++ LQTL GH
Sbjct: 721 TLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHT 768
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 10/117 (8%)
Query: 140 GHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAK-TLDFS 198
G G + H V + F PNG ++AT D +KIWD ++ + L+TL GH D +
Sbjct: 1094 GRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIA 1153
Query: 199 RKDSGDFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGVSGILIPGSGE 255
G S ++++ + + GK + IGH+ VS + GE
Sbjct: 1154 FSPDGKILASASHDQTV---RIWDVNTGKCHH------ICIGHTHLVSSVAFSPDGE 1201
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 22/128 (17%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH---AKTLDFSRKD 201
T+ H V +AF P+G+ +A+S D IK+WD+ + + L+TL H +++ FS
Sbjct: 763 TLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADG 822
Query: 202 SGDFSGSHNYNRYMGYSMVKGYQIGKVSFRPYEDVLGIGHSMGV--------SGILIPGS 253
SGS + + Y G+ + Y IGH+ V S IL+ GS
Sbjct: 823 QTLASGSGDRT-----IKIWNYHTGEC-LKTY-----IGHTNSVYSIAYSPDSKILVSGS 871
Query: 254 GEPNFDSW 261
G+ W
Sbjct: 872 GDRTIKLW 879
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 28/47 (59%)
Query: 151 GPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDF 197
G + + AF P G L+AT DC +++W+++ ++L GH+ + F
Sbjct: 643 GNILSAAFSPEGQLLATCDTDCHVRVWEVKSGKLLLICRGHSNWVRF 689
Score = 39.7 bits (91), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 137 VSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL 195
VS G T+ H G V ++AF +G +A+ D IKIW+ E L+T GH ++
Sbjct: 797 VSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSV 855
Score = 39.7 bits (91), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 146 MLC--HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGH 191
++C H V + F P+G ++A+ G D +K+W +R ++TL GH
Sbjct: 678 LICRGHSNWVRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGH 725
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 137 VSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTL 188
V+ G + H VS++AF P+G ++A+ +D ++IW+++ E LQ L
Sbjct: 1175 VNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKTGECLQIL 1226
Score = 36.2 bits (82), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAK 193
T + H V ++A+ P+ ++ + D IK+WD + + ++TL GH
Sbjct: 847 TYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTN 895
Score = 35.8 bits (81), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 137 VSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAK 193
+S G T+ H + +A+ P+G L+A++ D +++WD + L GH+
Sbjct: 1049 ISTGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSN 1105
>sp|B4P6P9|LIS1_DROYA Lissencephaly-1 homolog OS=Drosophila yakuba GN=Lis-1 PE=3 SV=1
Length = 411
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 116 GNFWTGLGRTDVIRVNPFNGVVSLGHSGGTMLCHQGPVSALAFHPNGHLMATSGKDCKIK 175
G F R IR+ VS+G T+ H V LAFHP G + ++ D I+
Sbjct: 309 GPFLASGSRDKTIRIWD----VSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIR 364
Query: 176 IWDLRKYEVLQTLPGH---AKTLDFSRKDSGDFSGS 208
+WDLR ++TL H ++DF + SGS
Sbjct: 365 VWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGS 400
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRK-YEVLQTLPGHAKTL-DFSRKDSGDFS 206
H V +AF G L+A+ D IK+WD ++ YE ++T+ GH + + +GD+
Sbjct: 149 HTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYV 208
Query: 207 GSHNYNRYMG-YSMVKGYQIGKVS-FRPYEDVLGIGHSMGVSGILIPGSGEPNFDSWVAN 264
S + +R + + + GY + + R + ++ + H G I S + W+ N
Sbjct: 209 LSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRV-HIEG--SIFATCSNDQTIRVWLTN 265
Query: 265 PFETSKQRREKE 276
+ + R+ E
Sbjct: 266 SKDCKVELRDHE 277
Score = 39.3 bits (90), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 149 HQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTL 195
H+ ++ + FHP LM ++ +D I+IWD E ++L GH ++
Sbjct: 107 HRASITRVIFHPIFGLMVSASEDATIRIWDFETGEYERSLKGHTDSV 153
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 145 TMLCHQGPVSALAFHPNGHLMATSGKDCKIKIWDLRKYEVLQTLPGHAKTLDFSR 199
TM H VS++AF P G + ++ +D IK+W++ ++T GH + + R
Sbjct: 188 TMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVR 242
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,541,985
Number of Sequences: 539616
Number of extensions: 6791287
Number of successful extensions: 27576
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 461
Number of HSP's that attempted gapping in prelim test: 22527
Number of HSP's gapped (non-prelim): 4750
length of query: 378
length of database: 191,569,459
effective HSP length: 119
effective length of query: 259
effective length of database: 127,355,155
effective search space: 32984985145
effective search space used: 32984985145
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)